BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (345 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AGJ6 Uncharacterized tRNA/rRNA methyltransferase yfiF... 714 0.0 UniRef50_C6CLV0 tRNA/rRNA methyltransferase (SpoU) n=25 Tax=Ente... 434 e-120 UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=She... 249 1e-64 UniRef50_P44703 Uncharacterized tRNA/rRNA methyltransferase HI04... 223 5e-57 UniRef50_Q0I1J4 tRNA/rRNA methyltransferase n=2 Tax=Histophilus ... 209 1e-52 UniRef50_B8F579 rRNA methyltransferase n=5 Tax=Pasteurellaceae R... 199 1e-49 UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonad... 176 9e-43 UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitu... 111 4e-23 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 107 7e-22 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 102 2e-20 UniRef50_Q552S2 Putative uncharacterized protein n=1 Tax=Dictyos... 100 1e-19 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 98 5e-19 UniRef50_B5JQW8 RNA methyltransferase, TrmH family n=1 Tax=Verru... 97 8e-19 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 97 1e-18 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 94 1e-17 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 93 1e-17 UniRef50_Q73J63 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 92 2e-17 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 92 2e-17 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 92 3e-17 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 92 3e-17 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 91 5e-17 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 90 2e-16 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 90 2e-16 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 89 2e-16 UniRef50_B6IWB6 RNA methyltransferase, TrmH family n=6 Tax=Prote... 88 5e-16 UniRef50_B2S202 Putative uncharacterized protein n=2 Tax=Trepone... 87 6e-16 UniRef50_C8PM13 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 87 7e-16 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 87 1e-15 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 87 1e-15 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 86 1e-15 UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhod... 86 1e-15 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 86 2e-15 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 86 2e-15 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 86 2e-15 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 85 3e-15 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 85 5e-15 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 84 5e-15 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 84 6e-15 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 84 7e-15 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 84 9e-15 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 83 1e-14 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 83 2e-14 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 82 2e-14 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 82 3e-14 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 82 3e-14 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 82 3e-14 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 82 4e-14 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 81 4e-14 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 81 5e-14 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 81 5e-14 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 81 5e-14 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 80 8e-14 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 80 1e-13 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 80 1e-13 UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13... 80 2e-13 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 80 2e-13 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 79 3e-13 UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 ... 78 4e-13 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 77 8e-13 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 77 9e-13 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 77 1e-12 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 77 1e-12 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 76 2e-12 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 76 2e-12 UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0... 76 2e-12 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 75 3e-12 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 75 3e-12 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 75 3e-12 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 75 3e-12 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 75 3e-12 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 75 4e-12 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 75 4e-12 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 75 5e-12 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 74 5e-12 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 74 6e-12 UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 ... 74 7e-12 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 74 8e-12 UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Ba... 74 9e-12 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 74 1e-11 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 74 1e-11 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 74 1e-11 UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16... 73 1e-11 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 73 1e-11 UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma p... 73 2e-11 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 73 2e-11 UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus ... 72 3e-11 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 72 3e-11 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 72 3e-11 UniRef50_Q8EX27 rRNA methylase n=1 Tax=Mycoplasma penetrans RepI... 72 3e-11 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 72 4e-11 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 72 4e-11 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 71 4e-11 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 71 5e-11 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 71 5e-11 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 71 5e-11 UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia ... 71 5e-11 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 71 6e-11 UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 ... 71 6e-11 UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 ... 71 7e-11 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 71 7e-11 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 71 7e-11 UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 ... 71 7e-11 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 70 8e-11 UniRef50_B1M5G3 RNA methyltransferase, TrmH family, group 3 n=16... 70 9e-11 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 70 9e-11 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 70 1e-10 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 70 1e-10 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 70 1e-10 UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Aceto... 69 2e-10 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 69 2e-10 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 69 2e-10 UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Ta... 69 2e-10 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 69 2e-10 UniRef50_B3EN44 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Chlor... 69 2e-10 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 69 3e-10 UniRef50_D0RNL1 SpoU rRNA Methylase family n=1 Tax=alpha proteob... 69 3e-10 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 69 3e-10 UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 ... 69 3e-10 UniRef50_B5JKI5 RNA methyltransferase, TrmH family n=1 Tax=Verru... 68 4e-10 UniRef50_B3PW50 23S rRNA (Guanosine-2'-O-)-methyltransferase n=2... 68 4e-10 UniRef50_Q0ANM8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Hypho... 68 4e-10 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 67 8e-10 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 67 9e-10 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 67 1e-09 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 67 1e-09 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 67 1e-09 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 67 1e-09 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 67 1e-09 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 67 1e-09 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 66 1e-09 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 66 2e-09 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 66 2e-09 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 66 2e-09 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 66 2e-09 UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomona... 66 2e-09 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 66 2e-09 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 66 2e-09 UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_... 65 2e-09 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 65 3e-09 UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax... 65 3e-09 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 65 3e-09 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 65 3e-09 UniRef50_B0WW26 Putative uncharacterized protein n=1 Tax=Culex q... 65 4e-09 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 65 4e-09 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 65 4e-09 UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 ... 65 5e-09 UniRef50_A8PJ82 RNA methyltransferase, TrmH family protein n=1 T... 65 5e-09 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 65 5e-09 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 65 5e-09 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 65 5e-09 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 64 5e-09 UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia agg... 64 6e-09 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 64 6e-09 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 64 6e-09 UniRef50_D0NTV0 SpoU rRNA Methylase family n=17 Tax=Phytophthora... 64 6e-09 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 64 7e-09 UniRef50_Q6MIZ9 RNA methyltransferase, TrmH family, group n=1 Ta... 64 7e-09 UniRef50_Q2G8L5 RNA methyltransferase TrmH, group 3 n=9 Tax=Sphi... 64 7e-09 UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2... 64 8e-09 UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax... 64 8e-09 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 64 8e-09 UniRef50_Q8KTG3 Putative tRNA/rRNA methyl transferase (Fragment)... 64 9e-09 UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, grou... 64 9e-09 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 64 9e-09 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 64 9e-09 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 64 1e-08 UniRef50_Q10T58 RNA methyltransferase, TrmH family protein, expr... 64 1e-08 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 64 1e-08 UniRef50_Q22484 Putative uncharacterized protein n=2 Tax=Caenorh... 64 1e-08 UniRef50_A6BZU1 Gm2251 methyltransferase of 23S rRNA n=1 Tax=Pla... 63 1e-08 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 63 1e-08 UniRef50_A5V919 RNA methyltransferase, TrmH family, group 3 n=2 ... 63 1e-08 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 63 1e-08 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 63 2e-08 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 63 2e-08 UniRef50_A3EV98 Putative TRNA/rRNA methyltransferase (SpoU) n=2 ... 63 2e-08 UniRef50_Q6KIE3 SpoU class tRNA/rRNA methylase n=1 Tax=Mycoplasm... 62 2e-08 UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 62 2e-08 UniRef50_B2IBT9 tRNA/rRNA methyltransferase (SpoU) n=19 Tax=Alph... 62 2e-08 UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpe... 62 3e-08 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 62 3e-08 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 62 3e-08 UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polar... 62 3e-08 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 62 3e-08 UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39... 62 3e-08 UniRef50_D0MER6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Rhodo... 62 4e-08 UniRef50_P47494 Uncharacterized tRNA/rRNA methyltransferase MG25... 62 4e-08 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 62 4e-08 UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, s... 62 4e-08 UniRef50_B6KS19 RNA methyltransferase, TrmH family domain-contai... 62 4e-08 UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax... 62 4e-08 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 61 5e-08 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 61 5e-08 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 61 5e-08 UniRef50_A4RE91 Putative uncharacterized protein n=1 Tax=Magnapo... 61 5e-08 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 61 5e-08 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 61 5e-08 UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_L... 61 5e-08 UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 ... 61 6e-08 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 61 6e-08 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 61 6e-08 UniRef50_A9T6G4 Predicted protein n=1 Tax=Physcomitrella patens ... 61 6e-08 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 61 7e-08 UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Ber... 61 7e-08 UniRef50_C0EHG6 Putative uncharacterized protein n=2 Tax=Clostri... 60 8e-08 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 60 8e-08 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 60 8e-08 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 60 8e-08 UniRef50_Q7BKE9 Predicted rRNA methylase n=4 Tax=Bacteria RepID=... 60 9e-08 UniRef50_B0S1P7 23S rRNA methyltransferase n=2 Tax=Finegoldia ma... 60 9e-08 UniRef50_C5PIG5 RNA methyltransferase, TrmH family, group 3 cont... 60 1e-07 UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA 60 1e-07 UniRef50_Q3ABT2 RNA methyltransferase, TrmH family protein n=1 T... 60 1e-07 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 60 1e-07 UniRef50_B0T2B4 RNA methyltransferase, TrmH family, group 3 n=2 ... 60 1e-07 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 60 1e-07 UniRef50_Q1UZI1 SpoU rRNA Methylase family protein n=3 Tax=Candi... 60 1e-07 UniRef50_Q7NN60 Gll0554 protein n=1 Tax=Gloeobacter violaceus Re... 60 1e-07 UniRef50_Q13395 Probable methyltransferase TARBP1 n=18 Tax=Metaz... 60 2e-07 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 59 2e-07 UniRef50_Q7MW92 RNA methyltransferase, TrmH family n=2 Tax=Porph... 59 2e-07 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 59 2e-07 UniRef50_B4SF96 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Chlor... 59 2e-07 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 59 2e-07 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 59 2e-07 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 59 2e-07 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 59 2e-07 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 59 2e-07 UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1... 59 2e-07 UniRef50_C6LXT0 TAR RNA loop binding protein, putative n=1 Tax=G... 59 2e-07 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 59 2e-07 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 59 3e-07 UniRef50_A8ER65 tRNA methyltransferase, TrmH family n=1 Tax=Arco... 59 3e-07 UniRef50_Q6FPX7 Strain CBS138 chromosome I complete sequence n=1... 59 3e-07 UniRef50_A1B8P8 RNA methyltransferase, TrmH family, group 3 n=29... 59 3e-07 UniRef50_A7BZJ1 SpoU rRNA Methylase family n=1 Tax=Beggiatoa sp.... 59 3e-07 UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax... 59 3e-07 UniRef50_B3LA97 rRNA methylase, putative n=1 Tax=Plasmodium know... 59 3e-07 UniRef50_C1F3I9 RNA methyltransferase, TrmH family protein n=1 T... 59 3e-07 UniRef50_A7NNQ2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Rosei... 59 4e-07 UniRef50_D1R685 Putative uncharacterized protein n=1 Tax=Parachl... 59 4e-07 UniRef50_C7MEI2 rRNA methylase n=1 Tax=Brachybacterium faecium D... 59 4e-07 UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 ... 59 4e-07 UniRef50_Q7S731 Predicted protein n=2 Tax=Sordariaceae RepID=Q7S... 58 4e-07 UniRef50_A8BHT7 TAR RNA loop binding protein, putative n=1 Tax=G... 58 4e-07 UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulob... 58 4e-07 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 58 4e-07 UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Prote... 58 4e-07 UniRef50_A0NEI0 AGAP005789-PA n=3 Tax=Culicidae RepID=A0NEI0_ANOGA 58 4e-07 UniRef50_C9RLF7 RNA methyltransferase, TrmH family, group 3 n=1 ... 58 5e-07 >UniRef50_P0AGJ6 Uncharacterized tRNA/rRNA methyltransferase yfiF n=148 Tax=Enterobacteriaceae RepID=YFIF_ECO57 Length = 345 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/345 (100%), Positives = 345/345 (100%) Query: 1 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR 60 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR Sbjct: 1 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR 60 Query: 61 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF 120 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF Sbjct: 61 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF 120 Query: 121 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK Sbjct: 121 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 Query: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI 240 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI Sbjct: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI 240 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY Sbjct: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 Query: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA Sbjct: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 >UniRef50_C6CLV0 tRNA/rRNA methyltransferase (SpoU) n=25 Tax=Enterobacteriaceae RepID=C6CLV0_DICZE Length = 397 Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust. Identities = 234/399 (58%), Positives = 274/399 (68%), Gaps = 60/399 (15%) Query: 1 MNDEMKGKSGKVKVMYVRSDDDSDK-----RTHNPRTGKG----------------GGRP 39 M+D + GK GKV+VMYVRS+D +K RT + R G G GGR Sbjct: 1 MSDTLSGKGGKVRVMYVRSEDGDEKNGKPKRTSDKRRGDGDNTRGGGRKGRDGAPRGGRD 60 Query: 40 GKSRAD------GGR----RPARDDKQSQPRDR-----KWE------------------- 65 R GGR R RD+ + RD KW Sbjct: 61 NAERGGRDNAERGGRGNAERGGRDNAERGGRDSAERGGKWRGESAGRERPRPPRREPVEH 120 Query: 66 -DSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRP 124 DSPW+TVSRAPG ETP DHGGISGKS +DPE +RRQRAEETRVYGENACQALF SRP Sbjct: 121 ADSPWKTVSRAPG-ETP---DHGGISGKSQVDPEQIRRQRAEETRVYGENACQALFLSRP 176 Query: 125 EAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT 184 EAIVR WF+Q VTPRF++ALRWMAANRKAYHVV++ EL +ASGTEHHGGVCFLIKKR G Sbjct: 177 EAIVRGWFLQEVTPRFRDALRWMAANRKAYHVVEDDELVRASGTEHHGGVCFLIKKRQGL 236 Query: 185 TVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAE 244 V ++ +AG DCVLALE+ NPHNLGG+MRSCAHFGVKGV+V DA+ LESGAA+RTAE Sbjct: 237 DVAAYLREAGETDCVLALEDVGNPHNLGGIMRSCAHFGVKGVLVNDASQLESGAAVRTAE 296 Query: 245 GGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLP 304 GGAEHV+ I+ + +V+ L FR AGYT+VTTSS +G L K +LPAK V+VLGQE +GL Sbjct: 297 GGAEHVKAISAEGLVDALAQFRAAGYTIVTTSSHKGTTLSKVALPAKSVIVLGQEGDGLS 356 Query: 305 DAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D+A D++V IDGTGNV LNISVATG+LL EWWRQ+ Sbjct: 357 DSAWQQGDVKVSIDGTGNVESLNISVATGILLAEWWRQH 395 >UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8M2_SHEAM Length = 333 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/330 (39%), Positives = 195/330 (59%), Gaps = 36/330 (10%) Query: 49 RPARDDK-QSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDP---------- 97 RPAR D+ Q + + + + TV A G E + G SGK D Sbjct: 2 RPARADRYQGRNQQERTQGDKGSTVEHAQGREDRARKGADGCSGKGRFDRNTGSGRTERR 61 Query: 98 ------EVLRR-----------------QRAEETRVYGENACQALFQSRPEAIVRAWFIQ 134 E RR QR ETR+YG NAC+ F+ R + +++ + + Sbjct: 62 DAYHHREAPRREPAHRATGAQAGFDGKDQRLNETRLYGINACRETFKLRSDEVIKLYLDE 121 Query: 135 SVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS--Q 192 P+F + ++++A NRKAYHVVD EL K +G++HHGGV +++++ + +++ Sbjct: 122 ETAPKFADVMKYLARNRKAYHVVDADELEKIAGSQHHGGVVMVVRRKPVQDIAGYLAANT 181 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQP 252 A ++DC+LAL+ NPHNLG +MRSCAHFGV G+V+ +A LL+SGAA RTAEGG EHV+ Sbjct: 182 AKSRDCLLALDGVGNPHNLGAIMRSCAHFGVAGIVMTEAGLLQSGAAARTAEGGMEHVEG 241 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 I D + + L R AGY+++TTSS G+ L+++ LPA++V+V G+E +G+ A D Sbjct: 242 IRCDRLTDALQLCRDAGYSIITTSSHGGESLYRSKLPARVVVVFGEEMDGVSKAVASRAD 301 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + V+I GTG V LN+SVA ++LGEW+RQ Sbjct: 302 IGVQIPGTGLVESLNVSVAASLILGEWYRQ 331 >UniRef50_P44703 Uncharacterized tRNA/rRNA methyltransferase HI0424 n=30 Tax=Pasteurellaceae RepID=Y424_HAEIN Length = 351 Score = 223 bits (569), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 119/312 (38%), Positives = 183/312 (58%), Gaps = 29/312 (9%) Query: 52 RDDKQSQPRDR---KWEDSPWRTVSRAPGDETPEK------------------ADHGGIS 90 R++K PRD+ K ++SRAP ++ E+ G +S Sbjct: 44 RNEKSRFPRDKQEVKETRITQLSLSRAPSNKNAEQPKVQVTIKSTGTVYKTKEKKTGALS 103 Query: 91 GKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAAN 150 ++ PE +++ RAEE +VYGENAC ALF RPE+IVR W ++ + E L ++A N Sbjct: 104 PRA---PEKIKKNRAEEMKVYGENACLALFAERPESIVRLWATVQMSHKIGEVLSYLAEN 160 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHN 210 +KAYHVVD EL + SGTEHHGG+C L+KK T+Q ++ +DC++ L+N +N N Sbjct: 161 KKAYHVVDSEELARVSGTEHHGGICLLVKKPRAFTLQGYLDIPRNEDCLVLLDNVNNAQN 220 Query: 211 LGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 +GG++R+CA+FGVK +V + L S A++R AEGGAE+++ + D I + L R++GY Sbjct: 221 IGGVLRTCAYFGVKNIVADNVENLYSAASMRVAEGGAEYIRVLEADYIDSALMQLRKSGY 280 Query: 271 TVVTTS-SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV-AGLNI 328 ++ S ++QG PL K L K+V VL E ++ P D + ++ + +GLNI Sbjct: 281 QIIHVSHNKQGDPLDKVRLKNKVVFVLS---ESSTESLATPEDTQARLTLASPIKSGLNI 337 Query: 329 SVATGVLLGEWW 340 +V GVLL +W+ Sbjct: 338 AVNAGVLLAKWY 349 >UniRef50_Q0I1J4 tRNA/rRNA methyltransferase n=2 Tax=Histophilus somni RepID=Q0I1J4_HAES1 Length = 364 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 102/245 (41%), Positives = 151/245 (61%), Gaps = 5/245 (2%) Query: 97 PEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV 156 PE +++ RAEE +VYGENAC +LF RPE+IVR W + + + ++A+N+K YHV Sbjct: 117 PEKIKKNRAEEMKVYGENACLSLFAQRPESIVRVWTTVEMAHKVGDLFSYLASNKKVYHV 176 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 VD +EL SGTEHHGG+C L+KKR T+ ++ ++C+L L N HN+GG++R Sbjct: 177 VDNSELALVSGTEHHGGICMLVKKRRPFTLHGYLDIPHQKNCLLVLNGVRNAHNIGGIIR 236 Query: 217 SCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 +C +G+ VV+ D LL S A+R AEGG E++ P+ D L RQAGY +V S Sbjct: 237 TCVCYGISAVVIDDVELLHSAVAMRVAEGGMEYIHPLEIDRTETALVKLRQAGYQIVHLS 296 Query: 277 S-EQGKPLFKTSLPAKMVLVLGQ-EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 S + K + + L K+ VL + + E L D A + +L + ++ + GLN+SVATG+ Sbjct: 297 SNKHAKTIKQLQLNDKVAFVLSEADTESLADKADELINLSL-VNPLKH--GLNVSVATGI 353 Query: 335 LLGEW 339 LL +W Sbjct: 354 LLAKW 358 >UniRef50_B8F579 rRNA methyltransferase n=5 Tax=Pasteurellaceae RepID=B8F579_HAEPS Length = 335 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 97/265 (36%), Positives = 159/265 (60%), Gaps = 8/265 (3%) Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF 140 P K+ G +S ++ PE +R RA E +VYGE+AC A+FQ RPEAIVR W + Sbjct: 75 PIKSKSGALSPRA---PEKIRNNRASEMKVYGEHACSAIFQQRPEAIVRLWITSECAKKT 131 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 L ++A ++KAYH+VD E+ + +GTEHHGG+C L+KK +++ ++ DC++ Sbjct: 132 GALLSYLADHKKAYHLVDTEEMLRVTGTEHHGGMCLLVKKSTPFSLEGYLQLERQHDCLI 191 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +N N+GG++R+CA +G+KG++V++ +L S A R AEGG E V P+ + Sbjct: 192 LLDGVNNAQNIGGIIRTCAFYGIKGIIVENNDILNSSNAARVAEGGLEFVYPLETKHKHI 251 Query: 261 VLDDFRQAGYTVVTTSSEQGKP-LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L R+AGY +V + ++ P L + L K+V VL E + + P D V++ Sbjct: 252 ALMQLRKAGYQIVHLTRQRQAPHLSRIVLSKKIVFVLS---EVISNEVEYPEDSIVQLSF 308 Query: 320 TGNV-AGLNISVATGVLLGEWWRQN 343 ++ +GLN++V G+LL +W++ + Sbjct: 309 ANSLNSGLNVAVNAGILLAQWYQNH 333 >UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonadaceae RepID=Q3BPZ8_XANC5 Length = 390 Score = 176 bits (447), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 111/316 (35%), Positives = 167/316 (52%), Gaps = 22/316 (6%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDD-KQSQPRDRKWEDSPWRTVSRAPGDETPEKADHG 87 +P + GR G+ DGG P+ + ++ PR +P RAP T Sbjct: 83 DPTMTQHDGRGGRPPRDGGSGPSHNPWGRAAPRT----PAPRSAAPRAPAQHT------- 131 Query: 88 GISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 + P A E R+YG NA QA+F++RP+A+ + + ++ P+FK L W Sbjct: 132 ----SAVTPPAAAASGNAREVRLYGINAVQAVFKARPQALRKLYLSEARIPQFKALLAWC 187 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL--ENE 205 R Y VVDEA+L+K + + HH G+ + + +Q+W++ A Q VLAL + Sbjct: 188 VTQRIGYRVVDEADLSKLAASAHHEGIVAEVLRVAPQPLQEWLA-ALPQGPVLALWLDGV 246 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 NPHN G ++RS AHFGV G+++ + L SGAA R AEGGAE V + + + Sbjct: 247 GNPHNFGAILRSSAHFGVAGLLLPAGSTLGLSGAAARVAEGGAEAVPLVQLPDTATAMAQ 306 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA-ARDPNDLRVKIDGTGNV 323 RQAG+ + T + G+ +F +LP ++V V+G E EG+ A ARD DL++ I G+G V Sbjct: 307 LRQAGFAIAATLVDGGQDVFAAALPQRLVYVMGAESEGMDRAFARD-CDLQLSIRGSGKV 365 Query: 324 AGLNISVATGVLLGEW 339 LN++ AT V W Sbjct: 366 ESLNVASATAVFQAAW 381 >UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitutaceae RepID=B1ZWW3_OPITP Length = 250 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/245 (31%), Positives = 117/245 (47%), Gaps = 10/245 (4%) Query: 103 QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAEL 162 + +E + G A +A F + P AI R +F + R R +A +K Y V+ AEL Sbjct: 1 MKPKELTICGLAAVRAQFAADPGAIKRLYFDYATGRRIGVICRTLAQRKKIYRCVEPAEL 60 Query: 163 TKASGTEHHGGVCFLI-----KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRS 217 K GT HHGG+ ++ ++ + WV + + +L L+ N HNLG + R+ Sbjct: 61 EKVGGTLHHGGIVAVVEAPEMREPAAADLTAWVKRC---EPLLVLDRIGNAHNLGAIART 117 Query: 218 CAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 A FG+ +++ AA S AA R AEGG H++ D++ L AGY V+ Sbjct: 118 AAFFGLPRLILPRDPAAAQPSEAAYRVAEGGMTHLELARVDDLPAFLRSLVAAGYDVIGA 177 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 ++ G P ++ + LVLG E GL V I G+G V LN+SVA VL Sbjct: 178 ATRGGLPQAQSHTGKPIALVLGNEEHGLSAEVAAACTRLVTIPGSGKVESLNVSVAGAVL 237 Query: 336 LGEWW 340 + E Sbjct: 238 IWELL 242 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 107 bits (266), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 21/247 (8%) Query: 109 RVYGENACQALFQSRPEAIVRAWF--------IQSVTPRFKE-ALRWMAANRKAYHVVDE 159 RV+G +A +A P+ IV+AW +Q+V R E + + A+RK Sbjct: 6 RVWGIHAAEAALDYSPDKIVKAWLDDHRMQNRLQAVATRLDELGVEIVRADRK------- 58 Query: 160 AELTKASGTEHHGGVCF---LIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 L + + H G+ L ++ + + A L L++ +PHNLG +R Sbjct: 59 -RLDRLADPRKHQGILLELDLPGEQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLR 117 Query: 217 SCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 +C GVKG+VV +D ++ + + A G AE V N+ LD F+Q GY VV Sbjct: 118 TCDAAGVKGLVVTKDQSVGLTPTVAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGA 177 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + E + L++ L +V+V+G E GL R+ D ++I G V LN+SVATG++ Sbjct: 178 AGEAERTLYELDLRLPLVVVMGAEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIV 237 Query: 336 LGEWWRQ 342 L E RQ Sbjct: 238 LYEVMRQ 244 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 12/235 (5%) Query: 112 GENACQALFQSRPEAIVRAWFIQSV-----TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 G +A +AL + RPEA++ F+Q PR ++ A L K + Sbjct: 9 GFHAVEALLRHRPEAVLE-LFVQDTRADRDDPRLAALMQAAKDFGIAIQRARREVLEKHA 67 Query: 167 GTEHHGGVCFLIKKR--NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 G ++ G V +R + + + QW+ A+ +L LEN ++PHNLG +RS GV+ Sbjct: 68 GPQNQGIVARARPRRPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQ 127 Query: 225 GVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS-SEQGK 281 V+V ++AA L + A RTA G AE + N+ ++LD R G VV T+ E+ + Sbjct: 128 AVIVPRRNAAGL-TPVACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSE 186 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 LF P + +V+G E GL RD D ++I G V LN+SVATGV+L Sbjct: 187 SLFTFQAPESLAVVMGAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVML 241 >UniRef50_Q552S2 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q552S2_DICDI Length = 787 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 84/311 (27%) Query: 115 ACQALFQSRPEAIVRAW----FIQSVTPRFKEALRWMAANRKAYHVVDEAE----LTKAS 166 + ++F+ RPE +V+ + F + K ++ + K Y +++E E L K S Sbjct: 377 SVLSIFERRPEDLVKLYIDSKFYKDNKLELKALIKHFVDSSKTYKILNEEESEETLRKVS 436 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQ---------------------------------- 192 GT HHGG+C + KK+ ++ + Sbjct: 437 GTIHHGGICAVTKKKYCMPTKELFDKEMEKANFLSNSPFTNKVHSFSSEFSKSKILNQIK 496 Query: 193 -----AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA-------AI 240 +G++ VL L+ NP N+G ++RS FGV+ V+ + ++G+ + Sbjct: 497 FNSLGSGSKPVVLLLDGIENPQNIGAIIRSAVLFGVESVIFVNEFDKKTGSINPYSAESY 556 Query: 241 RTAEGGAEHV---QPITGDNIVNVLDDFRQAGYTVVTTSS-------------EQGKPLF 284 R++ G E+ Q + VLD+F + G+ VVTT+S EQ KPL Sbjct: 557 RSSRGAVEYCNISQLYLRRDAAEVLDEFVENGWEVVTTASNKLIDDNADNGIVEQFKPLK 616 Query: 285 ----KTSLPAK----------MVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 SL + +VLVLG E +G+ + + + I GTG + LN+S Sbjct: 617 SLTKNISLYSDESNRVLGLKPIVLVLGSETKGISRTISKKSTVSISIPGTGLIESLNVSQ 676 Query: 331 ATGVLLGEWWR 341 A+ ++LGE WR Sbjct: 677 ASSIILGECWR 687 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 101/338 (29%), Positives = 151/338 (44%), Gaps = 28/338 (8%) Query: 21 DDSDKRTHNPRTGKG--GGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGD 78 DD KR++ R +G P + R+D RPA Q + RDR E SP R S GD Sbjct: 206 DDDGKRSYERRDDQGTRSSAPNRFRSD---RPA----QGRFRDRS-ERSPDRYRS---GD 254 Query: 79 ET------PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQS-RPEAIVRAW 131 E P D G S + + PE + ++G +A QA +S RP I R W Sbjct: 255 ERRQSSPRPRFGDSGPRSQRPNLQPEAEASTPPADDLIWGRHASQAALESGRP--IHRIW 312 Query: 132 FIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQW 189 + P+F + LR + V A L + +G H G+ + + Sbjct: 313 CTPEMRSAPKFLQLLREAKTSGVLVEEVTWARLAQVTGGSVHQGIALQTAAADTLDLSAL 372 Query: 190 V---SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEG 245 + S+ G +LAL+ ++PHNLG ++RS G G+V+ Q + +G+A + A G Sbjct: 373 IEGCSELGEPPLLLALDGITDPHNLGAVVRSAEAMGAHGLVLPQRRSAGLTGSAAKVAAG 432 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 EH+ N+ L+ + +GY V+ ++E L L +VLV G E +GL Sbjct: 433 AMEHLPVARVVNLNRSLEKLKDSGYRVIGLAAEGDVTLMDVDLEGPLVLVTGSEDQGLSL 492 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 R D V+I G LN SVAT + + E R+N Sbjct: 493 LTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRN 530 >UniRef50_B5JQW8 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQW8_9BACT Length = 241 Score = 97.1 bits (240), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 123/241 (51%), Gaps = 21/241 (8%) Query: 114 NACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGG 173 +A +LF +P + R +F + P F E +++A +K Y+ VD AEL + SGT HHGG Sbjct: 2 HAVGSLFHCKPFIVERLYFEMELAPMFGEICKFLAKEKKPYNQVDSAELLRVSGTPHHGG 61 Query: 174 VCFLIKKR----NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV- 228 V ++++R TT ++ ++ G +L L+ S+ NLGG+ R+ A+FGV+ ++ Sbjct: 62 VVAIVRRRPPELATTTAAEFWAKEGMP--MLILDGVSSVANLGGIARTSAYFGVEKFLIA 119 Query: 229 ---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 + A E A R A GG + V DN+ + L R+ + V +G PL + Sbjct: 120 ATRKQARPCEE--AYREARGGLDMVDLRLVDNVPSFLKGARKTHF--VIGLDIEGPPLPE 175 Query: 286 T-------SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 L + +V+G E GL ++++ + V I G+G + L++ T +LL + Sbjct: 176 LMGICPEDELEKPVAIVIGNEETGLHESSKQECSVLVGIPGSGAIDRLSVVAETALLLQK 235 Query: 339 W 339 + Sbjct: 236 Y 236 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 3/234 (1%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 +G N + E++ R W + V F EA A R A VD L + +G Sbjct: 39 WGRNPSLEQLERSGESVERVWLARGVEAEF-EAQVVRLAGRTALERVDRLALDQMTGGAV 97 Query: 171 HGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV- 228 H G+ +++ + ++ + Q AG V+ L+ +PHNLG ++R+ G V+V Sbjct: 98 HQGIALSLRRPDEVSLDDLLDQLAGGPALVILLDRCQDPHNLGSVIRTAEAAGASAVLVP 157 Query: 229 QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 +D ++ +G ++ + G A I+ N+ LDD ++AG+ VV + E +PL K + Sbjct: 158 KDRSVRLTGTVVKASAGAALRFPVISVVNVKRALDDLKEAGFWVVGLAGESSEPLGKLAW 217 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + VL +G E GL + R D +I +G LN VA + EW R+ Sbjct: 218 DQRTVLAVGAEGTGLAELTRKSCDFLARIPMSGQAESLNAGVAAALGAYEWARR 271 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 5/245 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDE-- 159 R+ ++ +G NA ++ ++ P A + + + F++ L +A + A V + Sbjct: 23 RRSEDKDLCWGRNAVISMLETVPSACKKIYLATGIQTTFRDDLLSLAG-KNAVEVTEANG 81 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 + L + +G E H G+ I + Q+ + G +LA+++ +PHN G M+R+ Sbjct: 82 SYLDEITGGEKHQGIVANIDLPKPRDLSQFSPKKGPS-LLLAMDHVKDPHNFGAMIRTAE 140 Query: 220 HFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 G GV+ ++ +G I+T+ G A V N+V ++ ++ GY VV E Sbjct: 141 AVGALGVIYPSRRSVGVTGTVIKTSAGAAFRVPLYEVTNLVRSMEILKKEGYWVVGLDHE 200 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 + + ++ + LP K+VL++G E EGL + + D +I G LN SVA + + E Sbjct: 201 EPRDIWSSPLPDKLVLMVGSEGEGLSRLSSERCDDLRRIPMVGKTGSLNASVAAALGMFE 260 Query: 339 WWRQN 343 W R N Sbjct: 261 WRRLN 265 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 117/240 (48%), Gaps = 4/240 (1%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++YG +A QAL Q P+ + + W + + PR + L A NR + E+ Sbjct: 6 KIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWVE 65 Query: 168 TEHHGGVCFLIKKR--NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H G V + + +++ + + +L L+ ++PHNLG +R+ G Sbjct: 66 GVHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGATA 125 Query: 226 VVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 V+V +D + + + A G AE + + N+ L+ +Q G VV T+ E + ++ Sbjct: 126 VIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQEIY 185 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + L +V+++G E +G+ R+ D VK+ G+V+ LN+SVATGV L E RQ + Sbjct: 186 QQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQRQ 245 >UniRef50_Q73J63 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola RepID=Q73J63_TREDE Length = 255 Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 15/241 (6%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 +E V G +C AL + PE I R +F + +F E +++A+N++ Y +V + EL K Sbjct: 7 KELPVCGFESCLALAKHHPEKISRLFFSEKRAKQFGEVCKYLASNKRLYRIVSDDELEKL 66 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ--DCVLALENESNPHNLGGMMRSCAHFGV 223 S + HH GV +I + ++ AQ + VL L+ N +NLG ++RS A FG+ Sbjct: 67 SESVHHQGVTAMIFEPEIPVLEHEEINLWAQNKEHVLMLDEIGNANNLGAIIRSAAFFGI 126 Query: 224 KGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS----- 276 + +V+ +D + +A R A+GG E V+ + L R T + T Sbjct: 127 ENIVLTKEDKQASITTSAYRVAQGGMEFVKIFKVSSTAWFLRQCR-GRLTCIGTDLRAHH 185 Query: 277 --SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 ++ G+ + K V+VLG E G+ + A+ +KI G+GNV LN++ A + Sbjct: 186 EIADLGRLIEKDE---ACVIVLGNEERGISEEAKKLCVHLIKIKGSGNVESLNVAQAATL 242 Query: 335 L 335 Sbjct: 243 F 243 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 11/240 (4%) Query: 110 VYGENACQALFQS-RPEAIVRAWFIQS--VTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 VYG NA L QS +P V +Q RF++ + A + + VD+A L + + Sbjct: 6 VYGRNAVWELLQSGKP---VNKLLLQGEGTAGRFQDIVSHARAQKIPFQFVDKAALDRLT 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAHFGV 223 H G+ + R V ++ AG + +L L+ +PHNLG ++R+ GV Sbjct: 63 EKAKHQGILAYVAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGV 122 Query: 224 KGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ + A + +T+ G EHV N+V L D ++AG V +E G Sbjct: 123 HGVIIPKRRSVSLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAE-GTE 181 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 ++++ L V+V+G E +GL ++ D V + G + LN SVA +L+ E RQ Sbjct: 182 VYRSDLTGARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQ 241 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 10/255 (3%) Query: 97 PEVLRRQRAEETRVYGENACQALFQ-SRPEAIVRAWFIQSVT--PRFKEALRWMAANRKA 153 P V+ AE +YG+ + A Q SRP + R W + + PRF L A Sbjct: 82 PTVVESDEAE--LLYGKQSVLAALQNSRP--LNRVWLTEKLRYDPRFLRLLDAAKAGGAV 137 Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNL 211 +V+ L + + +H GV ++ ++ + +LA + +PHNL Sbjct: 138 IDIVEPRRLDQLTAGGNHQGVAAQAAAHPYVEFEELIASLVERPDPVLLAADGIEDPHNL 197 Query: 212 GGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++RS FG +G+++ Q A+ + + A G EH+ N+ ++ ++AGY Sbjct: 198 GALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIARVTNLNQAIERLKEAGY 257 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 VV T + + L++ L +V+V+G E +G+ + D V I G LN SV Sbjct: 258 QVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASV 317 Query: 331 ATGVLLGEWWRQNKA 345 A G++L E RQ +A Sbjct: 318 AGGIMLYEVMRQRRA 332 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 7/238 (2%) Query: 110 VYGENAC-QALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++G NA +AL Q R V A ++++ PR +E + A + +L K G Sbjct: 5 LFGLNAVFEALGQGRK---VVALYVEAQRNPRLEEIVAQATERHVAVKQCERRQLDKMVG 61 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H GV +K ++ ++ Q ++Q+ ++ L L+ ++PHN G ++RS A G +GV Sbjct: 62 DVRHQGVVAQVKAQDFVSLAQLLAQSSQSERFFLILDGITDPHNFGALIRSAAAAGCQGV 121 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 + +D + +G +TA G +VQ N+ +++ ++AG V + E+G+ LF+ Sbjct: 122 IFAKDRSCPVTGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEGQSLFE 181 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L A + LV G E G+ R D + I G V LN+SVATG+ L E R + Sbjct: 182 APLSAPIALVAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVRNH 239 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 4/178 (2%) Query: 168 TEHHGGVCFLIKKRNGTT-VQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVK 224 TE+ GV L+ + + + ++ + A+D V+ L+ +P N G ++RS FGV Sbjct: 67 TENSQGVVALVSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECFGVD 126 Query: 225 GVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 G+V+QD ++ + ++++ G EHV I NI + +D F++ GY V ++ Sbjct: 127 GIVIQDRNNVKVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKVYGAEADGENLY 186 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 ++ S P K+ LVLG E G+ R+ D +KI G LN+SVA G++L E + Sbjct: 187 YEESYPKKVCLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAEMSK 244 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 6/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQ-SVTPRFKEAL--RWMAANRKAYHVVDEAELTKAS 166 VYG N A ++RP+ + R + ++ + R L R + V E T A Sbjct: 37 VYGVNPVLAALRARPDEVERLFLVEGQLGARAAGELLSRAREFGIRVEKVTRERLGTLAE 96 Query: 167 GTEHHGGVCFL--IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 G H G V L K + + G V+ L+ +PHNLG ++RS G Sbjct: 97 GGVHQGVVVELRGFKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADALGAH 156 Query: 225 GVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GVV+ +D A+ +G + + G EH + NI L++ ++AG V + +P+ Sbjct: 157 GVVIAKDRAVQVTGTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAADVDAKEPM 216 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + L + LV+G E G+ D D R++I G V LN SV+ G+LL E RQ Sbjct: 217 WSARLDGPLALVVGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQ 275 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 3/236 (1%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G +A A P++++ W R K L A H+VD+ L SG Sbjct: 7 IHGFHAINARLWQNPKSLIEIWLAGGRHDARAKAVLDKAGAENVKLHIVDKERLDSMSGN 66 Query: 169 EHHGGVCFLI-KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV +I N + + +L L+ ++PHNLG +R G V+ Sbjct: 67 ARHQGVVAMIDASMNYVDLDDVLENLSEPPLLLILDGVTDPHNLGACLRVADAMGAHAVI 126 Query: 228 V-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 +D + + + A G AE V IT N+ L D + AG + T+ E L+ Sbjct: 127 APKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEADTDLYHF 186 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + V+G E EG+ R+ D+ V I G V LN+SV++G++L E RQ Sbjct: 187 DASGPLAWVMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQ 242 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 3/241 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 A + +YG +A A P++IV + + + R +E L A + D L Sbjct: 2 ANQRPIYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEKAANENIRVYFADADRLN 61 Query: 164 KAS-GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 S G H G V F+ +N ++ + +L L+ ++PHNLG +R+ G Sbjct: 62 AISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMG 121 Query: 223 VKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V V+ +D + + + A G AE V IT N+ L + ++ G ++ T Sbjct: 122 VHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES 181 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ +LP V+G E +G+ R+ D+ V I G V +N+SV+ G++L E R Sbjct: 182 DLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRR 241 Query: 342 Q 342 Q Sbjct: 242 Q 242 >UniRef50_B6IWB6 RNA methyltransferase, TrmH family n=6 Tax=Proteobacteria RepID=B6IWB6_RHOCS Length = 265 Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/246 (30%), Positives = 113/246 (45%), Gaps = 22/246 (8%) Query: 109 RVYGENACQALFQSRPEAIVRAWF----IQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 R+ G A A+F P+ + R ++ Q+V P +A RK Y +V++ EL + Sbjct: 28 RICGLPAVAAVFARDPDRVQRLFYEERHRQAVGPFCAR----LAEARKPYRLVEKEELDR 83 Query: 165 ASGTEHHGGVCFLIKKR-----NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 +GT HGGV + + R N ++W ++ +L L+ NPHNLG ++R+ A Sbjct: 84 VAGTPLHGGVVAVAEPRQVLPFNPDWAKRWAAEG---RPLLLLDGIGNPHNLGAIVRTAA 140 Query: 220 HFGVKGVVVQDAA--LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 FG+ +V+ D S +A R AEGG E+VQ D + ++ Y VV T+ Sbjct: 141 FFGLDRLVISDHPEQAQPSESAYRVAEGGFEYVQIYRADRFATAVRRLAES-YRVVGTAL 199 Query: 278 EQGKPLF--KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 G P T P ++LG E +GLP I G G V LN++ +L Sbjct: 200 -GGHPALGRLTGGPKPPAVLLGNEEDGLPAETLRACAELATIPGAGQVQSLNVAATAAIL 258 Query: 336 LGEWWR 341 E R Sbjct: 259 AWEMTR 264 >UniRef50_B2S202 Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S202_TREPS Length = 319 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 91 GKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAAN 150 +S + E +R+RA T V G A + L PE I R +F RF ++AA Sbjct: 10 ARSQLSHEPPKRRRASLT-VCGLRAVETLGSIHPEKIHRFFFTPVRAKRFGPLCAYLAAR 68 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKK-----RNGTTVQQWVSQAGAQDCVLALENE 205 ++ Y + EL + + + HH GV I + + V+ WV + ++ V+ L+ Sbjct: 69 KRLYRSANTQELERLTQSVHHQGVAATIDEPRFPAVTHSQVEFWVQR---REFVVLLDRV 125 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQDA--ALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 + HNLG ++RS A FGV +VV D + A R A+GG E VQ + N VL+ Sbjct: 126 GDAHNLGAIIRSAAFFGVHSLVVSDCRQQAQVTSATYRVAQGGMEFVQLLRCTNAQEVLE 185 Query: 264 DFRQAG-YTVVTTSSEQGKPLFKTS---LPAK-MVLVLGQEYEGLPDAARDPNDLRVKID 318 AG T V S + L + S P + ++LVLG E GL + D +I Sbjct: 186 MC--AGKMTRVGASPHAFRSLTRLSNILSPEEAVILVLGNEETGLSEHLTAHCDHLCRIA 243 Query: 319 GTGNVAGLNISVATGVLL 336 G+G V LN++ A + L Sbjct: 244 GSGQVESLNVAQAGALFL 261 >UniRef50_C8PM13 RNA methyltransferase, TrmH family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM13_9SPIO Length = 271 Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 23/255 (9%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV-DEAELTK 164 +E V G A +AL PE I R +F S F +++A ++ Y +V +AEL K Sbjct: 19 KELAVCGFEAVKALAAEHPEKISRLFFAGSRARTFGALCKYLAQRKRLYRLVQSDAELEK 78 Query: 165 ASGTEHHGGVCFLIKKRNGTTV-----QQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 G+ HH GV +I++ V +QW +AG + VL + N +NLG ++RS A Sbjct: 79 LCGSVHHQGVVAMIEEPCIAAVTPERIKQW--EAG-KAAVLLCDRIGNANNLGAVIRSAA 135 Query: 220 HFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 FG++ +V+ +DA + +A R A+GG E + T + + L +GY + + Sbjct: 136 FFGIEHIVISGEDAQAQLTPSAYRIAQGGMEFITLYTAPSAEHFLKA--CSGYLMRLGAD 193 Query: 278 EQGKPLFKTSLPA------KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 + K +P+ +V+VLG E G+ A+ D+ VKI G+G + LN++ A Sbjct: 194 HRAYRSLK-DIPSLVRADEAVVVVLGNEEHGISAEAKKLCDVLVKISGSGAIESLNVAQA 252 Query: 332 TGVL---LGEWWRQN 343 + L E R++ Sbjct: 253 GTLFCSALAELRRES 267 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 3/239 (1%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 E VYG NA L QS+PE++ + + + P+ KE + + +LT Sbjct: 16 EQVVYGRNAVIELLQSKPESVEKIYLQFNTSHPKLKEIVITARRLKIPCGKARMEKLTLI 75 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 SGT + GVC L+ T+ + ++ + ++ L+ +PHN+G ++R+ Sbjct: 76 SGTAKNQGVCALLTSVTFYTLDEVLAAPRNSSPLLVILQGLEDPHNVGAIIRTAEAVAAD 135 Query: 225 GVVVQDAALLESGAAIRTAEGGA-EHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V++ + A + A GA H++ ++V LD + G+++V E Sbjct: 136 SVIMIEGKGAPISATVHKASAGALSHMRVCKVKSLVKTLDLLHERGFSIVAADMEAEHNH 195 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 VLV+G E +GL R D V+I G V LN+SVA GV+L E RQ Sbjct: 196 TDIDWKRPTVLVMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQ 254 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV--DEAELTK 164 E V+G N + + + E + ++QS + A + V+ + +LT+ Sbjct: 3 EELVFGVNPVREALRGKRE--IFGLYVQSTATDHRLDKILELARERGVRVIRREREDLTR 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC---VLALENESNPHNLGGMMRSCAHF 221 G+ HH G+ + + + + +D +L L+ +PHNLG ++R+ A Sbjct: 61 MCGSSHHQGMALKVAPFSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAACA 120 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G GVV+ +D A + AA + + G E + NI L+ +++GY V S E Sbjct: 121 GASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEAD 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 L++ + K+ LV+G E EG+ R D V I G V LN SVA G+ L E Sbjct: 181 ASLYEVAFSGKIALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVA 240 Query: 341 R 341 R Sbjct: 241 R 241 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE-LTKASGT 168 ++G +A + + P++I + + + L +A ++ E + L K +GT Sbjct: 7 IFGFHAITSRLRQHPDSIKEIYLDTNRHDQRARDLMSLAETTSTRLILCEQDRLCKMTGT 66 Query: 169 EHHGGVC-FLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV + K R T++ + +L L+ +PHNLG +R FGV VV Sbjct: 67 TRHQGVAAHVTKLRRYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAVV 126 Query: 228 V-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 V +D A+ S + A G + V N+ L + ++ G +V T+++ L Sbjct: 127 VPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPDTLDSV 186 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +L + VLG E G+ R+ DL V I +G++ LN+SV+ G+ L E +RQ+ Sbjct: 187 TLTRPLAWVLGAEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQH 243 >UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhodospirillaceae RepID=Q2RQU5_RHORT Length = 348 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 2/170 (1%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD 230 H G+ + + TV++ +++ V L+ S+PHN+G ++RS A FG++ VVVQD Sbjct: 173 HQGLALKVAPLSQPTVEE-IARIPGPSVVAILDQVSDPHNIGAVLRSAAAFGIRAVVVQD 231 Query: 231 -AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 + E+G ++A G E V + N+ LD F++ G+ + L + +LP Sbjct: 232 RHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETTLAEAALP 291 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + V+VLG E GL RD DL VK+ V LN+S A V E Sbjct: 292 ERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYEL 341 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/247 (28%), Positives = 110/247 (44%), Gaps = 14/247 (5%) Query: 105 AEETRVYGENACQALFQS-RPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAEL 162 ++ET+++G N QAL +S RP + W ++ R +E + A + + Sbjct: 2 SDETKIHGVNPVQALLESGRP--VSSLWVLKGRHGKRVEEMIEGFRARGVPIQFCERTAM 59 Query: 163 TKASGTEHHGGVCFLIKKRNGTTVQQW-----VSQAGAQDCVLALENESNPHNLGGMMRS 217 + + H GV R + W V + Q ++ L+ +PHNLG +MRS Sbjct: 60 DRMADGGAHQGVIARCAPREAMS---WDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRS 116 Query: 218 CAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 FG V++ +D + AI+ + G AE + I N+ ++ +Q V+ + Sbjct: 117 AEAFGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLA 176 Query: 277 SEQGKPLFKT-SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 E G PL T + LV+G E GL R+ D I G V LN+SVATGV Sbjct: 177 GEAGAPLIGTLDCKGPLALVMGNEGSGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVA 236 Query: 336 LGEWWRQ 342 L E RQ Sbjct: 237 LYEVLRQ 243 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 98/190 (51%), Gaps = 3/190 (1%) Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNL 211 + +VD++E K G H GV I++ ++ + ++ G Q +L L+ +PHNL Sbjct: 49 FKIVDKSEFIKKLGNVSHQGVMAEIEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNL 108 Query: 212 GGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++R+C GV GV++ ++ ++ +G + + G +HV+ N+ L+D ++ + Sbjct: 109 GAILRTCDAIGVDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSF 168 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 VV ++ + + +V+V+G E G+ + D+ V + G+V LN SV Sbjct: 169 WVVGCDLDKSQDYRQVDYNMPLVIVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASV 228 Query: 331 ATGVLLGEWW 340 AT V+L + + Sbjct: 229 ATAVILYQVY 238 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 102/205 (49%), Gaps = 9/205 (4%) Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRN--GTTVQQWVSQAGAQD-- 197 E + + N+ Y +V+EA + + +H + F + K+N T+++ ++ + Sbjct: 31 ELINLINKNKITYEIVNEAWFKQFDHSLNHQNIAFKLVKKNFQKTSLESFLKLIKDKKNA 90 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQ---DAALLESGAAIRTAEGGAEHVQPIT 254 VL L+ +P N G ++R+ FGV ++ + A++ + I+T+ G ++ I Sbjct: 91 LVLILDEIEDPRNFGAIIRTANGFGVDAIIYKKHHQASI--NDLVIKTSMGAINYIYMIE 148 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 +N+ N + + + G+ V TS + +P K K V ++G E +G+ D Sbjct: 149 VNNLSNTIKNLQDEGFWVYATSLLKSQPYEKVDYANKTVFIVGNENKGVSPLILKNADQS 208 Query: 315 VKIDGTGNVAGLNISVATGVLLGEW 339 ++ID G+V LN+ VATG++L + Sbjct: 209 IRIDMFGDVQSLNVGVATGIILAHY 233 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 5/188 (2%) Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAH 220 L + + T H GV + K+ + + + G V+ L+ +PHNLG ++RS Sbjct: 57 LDRTANTNMHQGVIAVTSKKEYLDLDDIIEKKRGEHAFVVVLDGIEDPHNLGALIRSADG 116 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS-SE 278 GV GVV+ + A+ +G A++ + G AE+V NI ++D + Y V T E Sbjct: 117 AGVDGVVIPERRAVGVTGTAMKASAGAAEYVPIARVTNIARSIEDLKDK-YNVWTVGLDE 175 Query: 279 QGKPLF-KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 +G + + + LVLG E +GL D R DL VKI G V+ LN+SVA G+++ Sbjct: 176 RGTQNYDEIDYNMSLALVLGAEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMY 235 Query: 338 EWWRQNKA 345 E RQ +A Sbjct: 236 EVSRQRRA 243 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/238 (26%), Positives = 104/238 (43%), Gaps = 6/238 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG + A +S + + R W + + PRF L A VD L + + Sbjct: 129 IYGRHTLLAALESERQ-LNRIWVVNQLRYDPRFHSLLLQAKAAGVVIDEVDYLRLDQITA 187 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKG 225 H G+ + + + + D +LA + ++PHNLG ++R+ G +G Sbjct: 188 HAKHQGIAAQVAPYSYLELDTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGAQG 247 Query: 226 VVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 +VV Q A+ + + A G EH N+ L+ + AG+ + ++ KP++ Sbjct: 248 LVVPQRRAVGITSTVAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATAAKPIY 307 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +VLV+G E GL A+ D V I G LN SVATG+ L E +RQ Sbjct: 308 SVEFSGPVVLVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQ 365 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 1/150 (0%) Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQ 251 A + VL L+ +P N G ++RS FGV G+++QD ++ + ++++ G EHV Sbjct: 83 AKQRSIVLVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETVVKSSTGAIEHVD 142 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPN 311 I N+ + +D ++ GY + ++ + P K+ LVLG E +G+ ++ Sbjct: 143 IIKVTNVSDSMDKLKKYGYFIYGAEADGETEYYNEPFPEKLCLVLGSEGKGMRKKVKEHC 202 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 D + I G + LN+SVA G+LL E + Sbjct: 203 DKILNIPMHGKINSLNVSVANGILLAEISK 232 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 1/184 (0%) Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 L + T+ H GV L++ G + ++Q +L L+ +PHNLG +RS Sbjct: 58 LGRKLNTDRHQGVGGLLRAFPGQDFEAILAQLNGCGFLLVLDGVLDPHNLGACLRSAEAA 117 Query: 222 GVKGVVVQDAALLESGAAIRTAEGGAEHVQPI-TGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV V++ A +R A G+ P+ T N+ L ++AG+ +V + E Sbjct: 118 GVDAVILPRDNACPVNATVRKASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMAGEGS 177 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + L+ L +V+V+G E +GL R+ D I G + LN+SVATG+ L E Sbjct: 178 RSLYALDLDMPLVMVMGGEEKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEAA 237 Query: 341 RQNK 344 RQ + Sbjct: 238 RQRR 241 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 68/238 (28%), Positives = 117/238 (49%), Gaps = 9/238 (3%) Query: 110 VYGENAC-QALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA-YHVVDEAELTKASG 167 VYG +A +AL R ++ + + + F LR +AA+R +V L + + Sbjct: 11 VYGRHAVKEALLAGR--SLYKILVARGLGGAFFHELRSLAASRSVPVQIVPAEALDRLTA 68 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H G L+ N ++ + + A C+L L ++P NLG ++R+ A GV+GV+ Sbjct: 69 RGVHQGCVALVSPYNYASLDEIL--ATHPSCLLVLAYITDPRNLGAILRTAAAVGVEGVI 126 Query: 228 V--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 + + AA L + A++ + GGAEHV+ N+ L ++ G+ V+ ++ L++ Sbjct: 127 IPSRRAAGL-TAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEADAKVSLWE 185 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +V+V+G E GL R D+ V+I T + LN SVA V+L E R+ Sbjct: 186 AEWNEPLVVVIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLRRQ 243 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 16/252 (6%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 E + V+G + L + RP + + + A+ +AA+ + +D A L A Sbjct: 44 EASLVWGIHPVTELLRRRPGLVRKLYLAGGRDDGRVAAIVELAASHRIP--LDRAGLPPA 101 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQ-------------AGAQDCVLALENESNPHNLG 212 + H GV + + ++ + + + AG +L L++ +PHNLG Sbjct: 102 AAELPHQGVAARVAPPSPLSLAELLQRLPALGPAPASSPAAGPPPLLLVLDSLQDPHNLG 161 Query: 213 GMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYT 271 ++RS A FGV GV++ +D + SG ++ A G A + N+ L ++ G+ Sbjct: 162 AVLRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICRTTNLAGALGTLKKHGFW 221 Query: 272 VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 + S E L++T LVLG E +G+ + D + I V LN+SVA Sbjct: 222 IYGASGEASGNLYETDFTGPTCLVLGNEQKGIRPLLKKHCDFLLAIPLAAGVESLNVSVA 281 Query: 332 TGVLLGEWWRQN 343 G++L E R+ Sbjct: 282 AGIMLAEIRRRQ 293 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 14/245 (5%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-----VTPRFKEA-LRWMAANRKAYHVVDEAELT 163 +YG +A +A+ PE + A+ ++ + P E + ++ + +D+ Sbjct: 6 IYGIHAVRAVLDKEPERFIEAYVLKGRQDDRLMPILNELQMVGVSLQQMTRKTLDD---- 61 Query: 164 KASGTEHHGGVCFL--IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 KA G H G + + K+ N + +++ A +L L+ ++PHNLG +R+ Sbjct: 62 KAHGANHQGIIARVKPAKQLNENDLDDILAK-HASPLLLILDGVTDPHNLGACLRNADAA 120 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV V+V +D + + + A G AE V + N+ + ++ G +V T+ E Sbjct: 121 GVAAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIVGTAGEAT 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 +++ L + +V+G E +G+ R+ D +KI G V+ LN+SVA+G+ L E Sbjct: 181 HDIYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAV 240 Query: 341 RQNKA 345 RQ A Sbjct: 241 RQRLA 245 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/189 (31%), Positives = 95/189 (50%), Gaps = 7/189 (3%) Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSC 218 +LT+ + T H GV ++++R+ T++ ++ G +LAL+ +P NLG ++RS Sbjct: 60 QLTRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSA 119 Query: 219 AHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 GV GV++ + A L S A++T+ G AEH++ N+V L+ ++ V Sbjct: 120 DGAGVDGVLLPERRSAPL--SAVAVKTSAGAAEHIRIARVVNLVRALEQLKEQNIWCVGL 177 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 V+VLG+E EGL D R D V+I G V+ LN+S A V+ Sbjct: 178 DERGTMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVV 237 Query: 336 LGEWWRQNK 344 L E RQ + Sbjct: 238 LYEAARQRR 246 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 87/338 (25%), Positives = 150/338 (44%), Gaps = 43/338 (12%) Query: 31 RTGKGGGRP-GKSRADGGRRPARD-DKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 R+GK P G R G R + D DK S D W+ GD + +DH Sbjct: 18 RSGKYASSPSGSKRTKFGTRKSFDPDKSSSKPD--WQK----------GDRPRKSSDH-- 63 Query: 89 ISGKSFIDPEVLRRQRA------------EETR---VYGENACQALFQSRPEAIVRAWFI 133 GKS ++ +R+ + E+T +YG +A +A ++ ++ R W Sbjct: 64 -LGKSRVEGNRIRQSFSRDHLDSRFESIDEDTSPDLIYGRHAVEAAIEA-GRSLNRLWV- 120 Query: 134 QSVTPRFKEALRWMAANRKAY-HVVDEAE---LTKASGTEHHGGVCFLIKKRNGTTVQQW 189 + + R + A KA VVDE E L++ + H G+ + ++ Sbjct: 121 -NAKLHYDSHFRPLIATAKANGSVVDEVENVRLSQMTQGASHQGIVAQVSAYEYVDLEVL 179 Query: 190 VSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEG 245 V QA + ++A + ++PHNLG ++RS G +G+V+ Q A+ + + + G Sbjct: 180 VQQAKNKARRPVIVAADGITDPHNLGAIIRSAEAIGAQGIVIPQRRAVGVTSTVAKVSAG 239 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 E++ N+ L+ + + + ++E + + T A +VLV+G E GL Sbjct: 240 ALENIPIARVINLGRALEYLKSNSFWIYGLTAEAAQSIHTTDFSAPVVLVVGAEGSGLSL 299 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + ++ D V I+ +G LN SVATG+ L E +RQ Sbjct: 300 SVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYRQT 337 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 1/148 (0%) Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPIT 254 Q V+ L+ ++PHN+G +MRS A FG + V+VQD A +G +TA G + V + Sbjct: 103 QALVIVLDQVTDPHNVGAIMRSAAAFGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVR 162 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 N+ LD +QAG+ V +PL + L + LVLG E EGL + D Sbjct: 163 VTNLARALDTLKQAGFWTVGLDESGARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEI 222 Query: 315 VKIDGTGNVAGLNISVATGVLLGEWWRQ 342 ++ G V LN+S A V L E R+ Sbjct: 223 ARLPTGGPVGSLNVSNAAAVALYEVARR 250 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 26/315 (8%) Query: 53 DDKQSQPRDRKWEDSPWRTVSRAP----------------GDETPEKADHGGISGKSF-I 95 D Q +PR R +D P R + GD+ P ++ GK+F Sbjct: 50 DRFQDKPRPRTNDDKPRRAGDKPSNFKSRFKDKDRDKPRYGDDRPRRSGQKPPFGKTFPA 109 Query: 96 DPEVLRRQRAEETR--VYGENACQALFQSRPEAIVRAWFIQSVTP--RFKEALRWMAANR 151 P + ++A+E +YG +A A + R W + R++ ++ AN Sbjct: 110 APPPMDSEQAQEALDLLYGHHAVLAALDGD-RQLNRIWITSHLRHDIRYRTKIQTAKANG 168 Query: 152 KAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNP 208 VD L + + +H G+ + + + + +A +Q ++ +++ ++P Sbjct: 169 TVVDEVDNFRLNQITHNANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDP 228 Query: 209 HNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 HNLG ++R+ FG +G+V+ Q + ++ A G EH N+ L+ ++ Sbjct: 229 HNLGAIIRTAEAFGAQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKE 288 Query: 268 AGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLN 327 +G+ + T + + L + L M LV+G E EGL + D + I G LN Sbjct: 289 SGFWIYGTVAGKQTALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLN 348 Query: 328 ISVATGVLLGEWWRQ 342 SVA + L E +RQ Sbjct: 349 ASVAAAISLYEIFRQ 363 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 10/243 (4%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV----VDEAELTKA 165 +YG +A + + P+ IV+ + ++ R + L+ + KA V + EL Sbjct: 7 IYGIHAVSGVLDAAPQRIVKLYVQEN---RDDQRLQSLVEKAKALGVKVILLSRTELNTL 63 Query: 166 SGTEHHGGV--CFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 S +H G V C ++ + + + + + +L L+ +PHNLG +RS FGV Sbjct: 64 SNEKHQGIVADCEEVENLDESALLSLLKKRETPALLLILDGVKDPHNLGACLRSANAFGV 123 Query: 224 KGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 + V+ +D A+ + + A G AE I N+ +D ++ G +V T+ E Sbjct: 124 RAVIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETL 183 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + + L + +VLG E GL ++ D +I G+V LN+SVA G+ L E RQ Sbjct: 184 IQEIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQ 243 Query: 343 NKA 345 +A Sbjct: 244 REA 246 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 6/186 (3%) Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRS 217 EL + +GT H GV ++ TV + +A G ++ L+ ++P N G ++RS Sbjct: 49 ELDQLAGTTQHQGVIAEVEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRS 108 Query: 218 CAHFGVKGVVVQD--AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 G GVVV++ +A L S ++TA G ++ N+ ++D ++ G + Sbjct: 109 AEVLGAHGVVVEERRSAPL-SPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGA 167 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + E + + +T L K+ LV+G E EGL R+ D V+I G V LN SVA G+L Sbjct: 168 AGEAAQDIGRTDLSGKVALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGIL 227 Query: 336 LGEWWR 341 L E R Sbjct: 228 LYEAAR 233 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 8/237 (3%) Query: 110 VYGENACQALFQSR-PEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELTKASG 167 V+G +A +++ E I + + + V F +E R+ V + +L K +G Sbjct: 15 VFGRHAGIDFLKTQDSEKINKVFLAEGVQEDFAREVYRYAKKKHLIIQRVPKNKLDKLTG 74 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKG 225 E+H G+ + Q + + ++ +L L+N +PHNLG ++RS GV G Sbjct: 75 GENHQGLVLAVASFEYADFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADATGVSG 134 Query: 226 VVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V++ + A+ L S A +T+ G +HV +N+V + GY + T+ E G Sbjct: 135 VIIPKRRASGLTSVVA-KTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAME-GDDY 192 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K + K VLV+G E +G+ D + I G+V LN SVATGVLL + + Sbjct: 193 RKWNANGKTVLVIGNEGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAF 249 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 1/161 (0%) Query: 183 GTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-R 241 G +++ +Q +L L+ +P NLG ++R+ GV G+++ E + R Sbjct: 81 GQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRTAECAGVDGIIIPSHKSAEVNPTVSR 140 Query: 242 TAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYE 301 + G EH+ I +N+VN + +Q G+ V+ ++ + F TS+P+ LV+G E + Sbjct: 141 VSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGADAKARQSYFNTSIPSPTALVIGGEGQ 200 Query: 302 GLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 G+ R+ D+ V+I G + LN SVA +L+ E RQ Sbjct: 201 GIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVLRQ 241 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 13/247 (5%) Query: 105 AEETRVYGENACQALFQS-RPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAE 161 E+ ++G ++ QA +S RP I R W V + +F + L+ + A+ V A Sbjct: 188 TEKDLIWGRHSTQAALESGRP--IHRIWCTSEVKSSSKFLQLLKKVKASSVLVEEVSWAR 245 Query: 162 LTKASGTEHHGGVCF---LIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC 218 L + G H G+ ++ + T + + G ++A+E ++PHNLG ++RS Sbjct: 246 LGQLIGGSGHQGIALQMAAVETLDLTKLIEDCCHLGENPLLMAVEGLTDPHNLGAIVRSA 305 Query: 219 AHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 G G+++ ++A L +G+ + A G EH+ N+ LD + GY +V Sbjct: 306 EALGAHGLILPQRRNAGL--TGSVAKVAAGALEHLPVARVVNLNRSLDILKDKGYRIVGL 363 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 ++E L + L +V+V G E GL R D ++I G LN SVA+ ++ Sbjct: 364 ATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRIPLRGATPSLNASVASALM 423 Query: 336 LGEWWRQ 342 L E R+ Sbjct: 424 LYEVARR 430 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 81.3 bits (199), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 8/242 (3%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTK 164 ++ ++YG +A + + P I F + V R + + AY + ++ K Sbjct: 2 KQQQLYGIHAIEKFLKQSPHLIYSLTFQKGPVNKRVQSLMDQAKRMGIAYQLEPKSFFNK 61 Query: 165 ASGTEHHGGVCFLIKKR---NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 G H GV + K N T ++ + +A + L L+ +PHNLG ++R+ Sbjct: 62 LEGV--HQGVVATVAKEADLNETDLKALL-EAESNPLFLFLDEVQDPHNLGAILRTADAT 118 Query: 222 GVKGVVVQDAALLESGAAIR-TAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV VV+ + A +R A G AE V+ + N+V + + +QAG V + E Sbjct: 119 GVTAVVIPKHNSVGVNATVRKVACGAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETN 178 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 L++ + LV+G E GL R+ D I G++ LN+SVATGV+L E + Sbjct: 179 TTLYQLDFKGAVGLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVY 238 Query: 341 RQ 342 RQ Sbjct: 239 RQ 240 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 8/239 (3%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 YG ++ ++L + PE ++ + ++ R ++ L + L K +G Sbjct: 8 YGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILELAEPFGISVQKASRDSLEKLAGLP 67 Query: 170 HHGGVCFLIKKR---NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H GV ++ N + Q + Q Q +LAL+ ++PHNLG +R+ A G+ V Sbjct: 68 FHQGVVAAVRPHPVLNEKDLDQLL-QNNDQALLLALDQVTDPHNLGACIRTAAAMGIAAV 126 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV--TTSSEQGKPL 283 +V +D + + A + A GGAE V+ I N+ L + + V T E+ P+ Sbjct: 127 IVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKALPI 186 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 K + +V+G E GL + D V I +GN+ LN+SVA G+ L E RQ Sbjct: 187 QKYDFSGNVAIVMGAEDTGLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQ 245 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 143/348 (41%), Gaps = 30/348 (8%) Query: 8 KSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDS 67 +SGK++ R+ KR P+ + G P + + +P R D Q R+W Sbjct: 15 RSGKLQPR--RAGQSVSKRVQRPK--RRDGDPKLALREAPVKPIRRDAQ-----RQW--- 62 Query: 68 PWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQ-------RAEETRVYGENACQALF 120 P ++ P E D G +G++ I P ++ Q E+ +YG A Sbjct: 63 PQGKMAPQPVGEL----DPGLSTGETGILPGEVQPQADGNPETELEQEIIYGRQTVLAAL 118 Query: 121 QSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLI 178 +S+ + R W + + +P+F L A V L + +H G+ Sbjct: 119 KSQ-ATLNRVWILPKLRYSPQFLSLLEEAKARGTVIDEVSPKRLNALTAGANHQGIAAQA 177 Query: 179 KKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALL 234 ++ V QAG ++ L+ +PHNLG + RS FG++G+V+ Q A Sbjct: 178 TPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRRAAG 237 Query: 235 ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVL 294 + ++ A G + N+ L+ ++ G+ V T+S P++ + L Sbjct: 238 VTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTTSRGADPIYSADFQRPIAL 297 Query: 295 VLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 V+G E EG+ + D + I G LN SVA G+ L E RQ Sbjct: 298 VVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQ 345 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 4/241 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEAL-RWMAANRKAYHVVDEAELT 163 A + +G N L + RPE + + + F++ + R A R V+ EL Sbjct: 19 ASDDLCWGRNPVLTLLEHRPELCRKVFLLAGAQDEFRDTVARLCADGRIPLDFVEREELE 78 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHF 221 + SG H GV + + V Q ++ L++ +PHNLG ++R+ Sbjct: 79 RLSGGAVHQGVAARVAPIPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVA 138 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G VV Q D + +G ++T+ G A + N+ ++ ++ G+ VV Sbjct: 139 GAACVVCQNDRSATVNGTVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTD 198 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + ++ ++LP ++ LV+G E EG+ D+ VK G LN SVA + + EW Sbjct: 199 ETVWSSALPERLALVVGSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWV 258 Query: 341 R 341 R Sbjct: 259 R 259 >UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13 Tax=Rhizobiales RepID=A7IKP0_XANP2 Length = 288 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%) Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITG 255 D VL L+ ++PHN+G ++RS A F V +V + +G ++A GG EHV Sbjct: 138 DLVLVLDQITDPHNVGAIVRSAAAFAVSAIVTTARHSPAATGVLAKSASGGLEHVPFCLV 197 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 N+ L + ++ G VV SE L T + A + LVLG E +GL R+ D+ Sbjct: 198 TNLARALTELKENGMLVVGLDSEGPADLEDTPMRAPLALVLGAEGKGLRQLTRETCDVLA 257 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQNK 344 +ID G + LN+S A + LG R K Sbjct: 258 RIDLPGAIKSLNVSNAAALSLGMARRVMK 286 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 8/190 (4%) Query: 155 HVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 + + + + + TE+ G+ ++K N Q D L + +P NLG + Sbjct: 76 YCITDTLFKELASTENPQGIIAIVKMNNKKLDFQG-------DFYLFCDKVQDPGNLGTI 128 Query: 215 MRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ GV G+V+ + + + IR+ G ++ D+ +++ ++ G+T++ Sbjct: 129 IRTAHAAGVNGIVLSKGTVDIYNEKTIRSTMGSLFYMPIYYDDDEFSLIKSLKKDGFTLI 188 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 TS E K FK L K++L +G E G+ + D D RVKI G LN+++AT Sbjct: 189 VTSLESSKDFFKEDLKGKIILTVGNEGNGVSNEVLDLADRRVKIPMPGGAESLNVAIATS 248 Query: 334 VLLGEWWRQN 343 +++ E RQN Sbjct: 249 IIIYEKVRQN 258 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 4/185 (2%) Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 VV +A K +E+H G +K N + V + VL L++ +PHN G ++ Sbjct: 45 VVKDASFFKEYNSENHQGYLLFLKDFNYYEID--VIKKDNPKTVLILDHIHDPHNFGAII 102 Query: 216 RSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ G+K +++ +D + + ++ + GG V+ I NI + ++ ++ G+ + + Sbjct: 103 RTANAAGIKHIIIPKDRSTDVTSTVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYS 162 Query: 275 TS-SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 + E P K LV+G E +G+ + D++V I G V +N+SVATG Sbjct: 163 SLLDENAVPYNKVQYAGNCALVVGNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATG 222 Query: 334 VLLGE 338 +LL E Sbjct: 223 ILLFE 227 >UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHP2_RHOVA Length = 310 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 23/308 (7%) Query: 38 RPGKSRADGGRRPAR----DDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKS 93 +P K R D R+ R D + PRD + W SR GD + A +G+S Sbjct: 6 KPSKPRHDESRKQGRAAGAKDADTGPRDGAPKQEAW-AFSRF-GDSR-KSARRPKTAGES 62 Query: 94 FIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA 153 F + A ET +YG ++ +A + I AW ++ R L A + A Sbjct: 63 FA------KLAAGET-LYGLHSVEAALANPKRRIRHAWLTENAAARLAPLLD---ARKIA 112 Query: 154 YHVVDEAELTKASGT-EHHGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNL 211 + A+L +G H G ++ + ++ G A V+ L+ ++PHN+ Sbjct: 113 ATLALPADLDALTGPGAVHQGAVLQVEPLAQPGLDDFLDALGDAPATVVILDQVTDPHNV 172 Query: 212 GGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++RS A FG+ ++VQD AA+ ++A GG EHV I N+ VL+ ++ + Sbjct: 173 GAVLRSAAAFGIGALIVQDRHSPPLTAALAKSASGGLEHVPVIEVVNLARVLEKLKERDF 232 Query: 271 TVVTTSSEQGKPLFKTSLPA--KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 + SE G F +L ++ V G E +GL R+ D + G + LNI Sbjct: 233 LCIGFDSE-GAQRFDAALAGGRRVAFVFGAEDKGLRRLVREGCDAIAALSAPGPIKSLNI 291 Query: 329 SVATGVLL 336 S A ++ Sbjct: 292 SNAAAIVF 299 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 77.0 bits (188), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 10/224 (4%) Query: 126 AIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNG 183 AI R W + TP+F + L+ A+ V + L + + H G+ I Sbjct: 194 AIHRIWCTSELRSTPKFFQLLKDQKASGVLVEEVSWSRLGQLTNGAVHQGIVLQIAASKT 253 Query: 184 TTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESG 237 ++ + G +LAL+ ++P NLG ++RS G +G+++ + A L +G Sbjct: 254 LDLKNLIDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALGAQGLILPQRRSAGL--TG 311 Query: 238 AAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLG 297 + + A G EH+ N+ L+ + GYTVV + E L + +V+V+G Sbjct: 312 SVAKVAAGALEHLPVARVVNLNRSLEKLKDEGYTVVGLAEEGSSTLSEIKFQGPLVVVVG 371 Query: 298 QEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 E +G+ R D V+I G LN SVAT + L E R Sbjct: 372 SEDKGISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVAR 415 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 2/145 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDN 257 +L L++ +P N+G +MRS FG GVV+ ++ + + + G H+ +N Sbjct: 85 ILFLDSVEDPQNMGAIMRSAEFFGCAGVVIPKRRCVQVNETVAKVSAGAVFHLDIARVEN 144 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + N+L ++ G TVV + G+PL L + +V+G E +GL + D KI Sbjct: 145 LANILKKLKKFGITVVGADLD-GEPLRNVDLSPPLAIVVGGEDKGLSKPVKKQCDFIAKI 203 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 +G G + LN+SVA +++ E+ R+ Sbjct: 204 EGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 16/293 (5%) Query: 62 RKWEDSPWRTVSRAPGDETPEKADHGGISGKS-----FIDPEVLRRQRAEETR--VYGEN 114 RK + +P +S A P K D ISG S + Q EE +YG + Sbjct: 57 RKIDSNP---ISVANPTRNPRKIDSNTISGNSRQRNSNFSQSPVSTQPIEEDNDIIYGRH 113 Query: 115 ACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHG 172 + Q + + R W + P F L N V+ L + +H Sbjct: 114 PVLSALQKQ-RNLNRIWITTRLRYDPSFHHFLLQAKENGTVIDEVEPKRLDYLTNGANHQ 172 Query: 173 GVCFLIKKRNGTTVQQWVSQAGA--QDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-Q 229 GV + + Q+ + ++ + ++PHNLG ++R+ G +G+V+ Q Sbjct: 173 GVAAQTAPYGYIELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIPQ 232 Query: 230 DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 A + ++ A G E+ N+ L++ ++AG+ + T++ +P+ + Sbjct: 233 RRASGITSTVMKVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAASGSEPVHTVNFK 292 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +VLV+G E EGL + D V I G LN SVA G+ L E +RQ Sbjct: 293 GPIVLVIGSEGEGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQ 345 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 5/148 (3%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITG 255 ++ L+ +PHNLG ++RS FG GV++ + A++ S +T+ G ++ I Sbjct: 91 LIILDQIEDPHNLGAIIRSAESFGFDGVIIPERRSASV--SPIVYKTSAGAINNINIIMV 148 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 N +++ ++AG+ V + E P+ + L K+ L++G E +GL R+ D+ + Sbjct: 149 KNTNRAIEEIKEAGFWVYGLAGEASSPIDQVDLKGKVCLIVGNEGKGLSRLVRENCDILI 208 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQN 343 I G V LN SVA+ + + E RQN Sbjct: 209 NIPMKGFVNSLNASVASAIAMYEVLRQN 236 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 5/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK--ASG 167 +YG N + S E + R + + +R +A R + E A Sbjct: 4 IYGVNPLREALISGGEGVTRIVVARGRSESSISEIRTLAKQRGIPVEIRERSFLDDLAGH 63 Query: 168 TEHHG--GVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H G GVC + ++ V + D VL L+ +PHNLG ++RS FG G Sbjct: 64 ASHQGVLGVCTAYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGANG 123 Query: 226 VVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 +++ + A +G I+T+ G A H+ N+ LD+ + G+ + + + + Sbjct: 124 IILPERRAASVTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARADQSVS 183 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + LV+G E +GL R D + I G + LN+SV+ G++L E R+N Sbjct: 184 DPDYQGAVGLVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRKN 242 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 4/191 (2%) Query: 158 DEAELTKASGTEHHGGVCFL---IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 D L++ +G+ +H GV L K + ++ Q + +L L+ ++PHNLG + Sbjct: 54 DNDTLSELAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAI 113 Query: 215 MRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +RS FGV G+++ + A+ + ++T+ G EH++ NI N + D ++ G +V Sbjct: 114 IRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIV 173 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 T K + + + V+G E +G+ D VKI G + LN SVA Sbjct: 174 GTDVNAEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAAS 233 Query: 334 VLLGEWWRQNK 344 +L+ + + K Sbjct: 234 ILIYQVVSKRK 244 >UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0516 n=21 Tax=Borrelia RepID=Y516_BORBU Length = 228 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 12/223 (5%) Query: 131 WFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWV 190 + Q +P+ KE + ++ EL K + H G +K V+ Sbjct: 3 FIYQKKSPKTKEIEQLAKTQNIKIIRINTNELDKILKNKDHRGFALKLKLEKNKNVKTQT 62 Query: 191 S---------QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAI 240 + +L L+ +P N G ++R+ F + V+ Q + ++ + Sbjct: 63 KDFENLLETFKKKENAFILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVL 122 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQE 299 RT+ G +++V+ +T NI N ++ + G+ + T +G+ + K + K+ L+LG E Sbjct: 123 RTSSGASQYVKKMTVTNINNTINLLKNYGFWIYT-GDIKGQDINKIKINDKKIALILGNE 181 Query: 300 YEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +G+ ++ +D ++I +G + LN+SV+TG+L+ E RQ Sbjct: 182 GKGVHKLIKENSDFLIRIPTSGKIDSLNVSVSTGILIFEIKRQ 224 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 58/145 (40%), Positives = 74/145 (51%), Gaps = 1/145 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 +L L+ +PHNLG MRS A G GVV +D A S A +TA G + + N Sbjct: 118 LLVLDRVQDPHNLGACMRSAAAAGAHGVVAPRDRAAALSPAVHKTAAGAVQRIPFFQVTN 177 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + L R AG VV + E K ++ L + LVLG E EGL R+ D RV I Sbjct: 178 LARTLQQLRDAGVHVVGAAGEAEKSCYEVDLRGPLALVLGGEGEGLRRLTRERCDERVAI 237 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 G++ LN+SVA GVLL E RQ Sbjct: 238 PMPGSMESLNVSVAAGVLLFEAVRQ 262 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 105/242 (43%), Gaps = 13/242 (5%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV-VDEA---ELTKASG 167 G +A A+ Q PE R +Q + + AL + +A + V+ A +L + Sbjct: 15 GIHAVAAVLQHAPE---RVRLLQLASGTLEPALAQLLEQAQARGISVERAGRDKLDQHHP 71 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H GV R + V + D VL L+ ++PHNLG +R+ G + Sbjct: 72 GFQHQGVIVHCAPRPVVEEKALVQRVRNGLDLVLVLDGVTDPHNLGACLRTADAAGAGAI 131 Query: 227 VV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V AAL + AAI+ A G AE V + N+ L + AG V + L Sbjct: 132 VTPRHHSAAL--TPAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLDGAAHEDL 189 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L +V+G E EG+ R+ D +I G V LN+SVATG+ L E RQ Sbjct: 190 YAVDLRPPTAIVMGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARRQR 249 Query: 344 KA 345 +A Sbjct: 250 RA 251 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 4/182 (2%) Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 S TE H GV + + + + V+ + +L L++ +PHNLG ++R+ GV Sbjct: 89 STTERHQGVIAYVAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASGV 148 Query: 224 KGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV-TTSSEQGK 281 K +++ + A + S A++ + G EH+ I N+ + + ++ G+ + TT +E+ + Sbjct: 149 KAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERSE 208 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 K + + +V+G E EG+ + D + G + LN SVA G+++ E + Sbjct: 209 DYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERIK 268 Query: 342 QN 343 N Sbjct: 269 SN 270 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 7/187 (3%) Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRS 217 +L + + H G +C+L N ++ VS ++G ++ L+ ++ N G + RS Sbjct: 77 KLDRVTRKNHQGVICYL-SAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARS 135 Query: 218 CAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 GV ++V + AA L S A ++T+ G H+ D++++ + +Q G ++ Sbjct: 136 AECLGVDAMIVPSRGAAQLNSDA-VKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIAC 194 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 S + ++ L V+++G E +G+ D V I +G++ LN+SVATG++ Sbjct: 195 SEKASINVYDEDLTDPCVILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMI 254 Query: 336 LGEWWRQ 342 L E RQ Sbjct: 255 LSEVTRQ 261 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 13/240 (5%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA-YHVVDEAELTKASGT 168 +YG++ L + + W K + N K +VV E +L + T Sbjct: 6 IYGKHVIYELLKKHKNMVKEIW-----VKNLKLLDEFDLKNTKIKINVVSENKLDQLLKT 60 Query: 169 -EHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKG 225 E H G+ IK N T + ++ ++ VL L+ +P+N G ++RSC+ V G Sbjct: 61 NELHQGIIAQIKDFNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSLLNVDG 120 Query: 226 VVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP-L 283 +++ D ++ + ++T+ G A ++ +N+ N + + G+ + T+ Q + Sbjct: 121 IIILDKKQVQVNSTVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQNSTDM 180 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 KT K V+++G E +G+ + +D + + N+ N SVA ++ +W N Sbjct: 181 TKTQFANKSVVIIGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIIC--FWIAN 238 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 75.1 bits (183), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE-SNPHNLGGMM 215 VD+ L K + H G V I+ ++Q+ + GA++ ++ L ++ +PHNLG ++ Sbjct: 49 VDKFRLDKMADGVHQG-VVIEIQDYKYHSLQEIIK--GAKNNLIVLCDQLEDPHNLGAIL 105 Query: 216 RSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 R+C GV GVVV + L + A + T G V+ N+V + + ++AGY V Sbjct: 106 RTCDACGVDGVVVGKHRSVGLTSTVAKVST--GAINTVKVAEATNMVKAIAELKEAGYWV 163 Query: 273 VTTSSEQGK---PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 V + F +P +VLV+G E +G+ + D+ I G+V LN+S Sbjct: 164 VAAENAVDAVDYTEFNVDMP--LVLVVGSEGKGISRLVKKECDILTTIPMQGSVNSLNVS 221 Query: 330 VATGVLLGEWWRQNK 344 VATGVLL + R+ K Sbjct: 222 VATGVLLFDIVRRRK 236 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 7/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTP--RFKEALRWMAANRKAYHVVDEAEL 162 + E ++YG ++ + + P +V+ FI R + ++ + AN +H+ + L Sbjct: 2 SSEKKIYGFHSITSQIRLDP-LVVKEIFIDEARSDGRVNDLMKIIKANEVKFHLSTKDRL 60 Query: 163 T-KASGTEHHGGVCFLIKKRNG-TTVQQWVSQAGAQDCV-LALENESNPHNLGGMMRSCA 219 SG +H G V + + +N TV+ + + + + L L+ +P NLG R Sbjct: 61 DGMVSGNKHQGVVALVREAQNKYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVAD 120 Query: 220 HFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 GV ++ +D A+ + + A GGAE V + N+ + + + V T Sbjct: 121 AMGVDALICPKDNAVGLNATVRKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDN 180 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 K L KT+ + LV+G E +G+ + D I G V LN+SVA+G+ L E Sbjct: 181 ANKSLQKTNFKGSIALVMGSEGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYE 240 Query: 339 WWRQ 342 RQ Sbjct: 241 INRQ 244 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 7/217 (3%) Query: 125 EAIVRAWFIQSVT-PRFKEALRWMAANRKA-YHVVDEAELTKASGTEHHGGVCFLIKKRN 182 EA+ W I+++ R E A N ++ V L K + TE V L++ R Sbjct: 41 EALASGWTIRALFFTRLPEGWEQQAENSSLPWYEVPLPVLQKITATEDPQSVAALVELRR 100 Query: 183 GTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIR 241 ++ + A + VL L+ +P NLG ++R+ G GVV+ ++ A L + +R Sbjct: 101 ----EELAAFAPERGMVLVLDRIRDPGNLGTLIRTADALGAAGVVLLENTADLYNPKVVR 156 Query: 242 TAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYE 301 + G H+ TG + + RQ GY + T+ E + + + + P K LVLG E E Sbjct: 157 STMGSLFHLPVFTGVKTGELEEWCRQHGYALWATALEGAEDMTRLTWPEKTALVLGSEAE 216 Query: 302 GLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 G+ D +VKI G+ LN++VA G+++ E Sbjct: 217 GVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFE 253 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 1/158 (0%) Query: 186 VQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAE 244 ++ V AG Q +L L+ +PHNLG +RS A GV V++ +D ++ + +T+ Sbjct: 88 LKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSS 147 Query: 245 GGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLP 304 G A+ + I N+ L + ++ + + E L+ L + LVLG E +GL Sbjct: 148 GAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVETSLYALDLRGNVALVLGGEADGLR 207 Query: 305 DAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 R+ D+ +I G V LN+SVA GV L E RQ Sbjct: 208 RLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVRQ 245 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 8/178 (4%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV LI Q++ Q ++ VL L+ +PHNLG ++R+ GV GV+ Sbjct: 66 HQGVAALIAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADATGVDGVI 125 Query: 228 V---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 + + L ++ A + + G EHV I N+ +D+ + G+ V T + Sbjct: 126 IPKRRSVTLTQTVA--KASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEANNATDYR 183 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + +V+G E +G+ D D +KI G+V LN SVA +++ E +R+ Sbjct: 184 NLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVFRK 241 >UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Beijerinckiaceae RepID=B2IK44_BEII9 Length = 293 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 27/292 (9%) Query: 51 ARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRV 110 A+ + PR + WE G+ P + S + +P R+ + + Sbjct: 17 AKRSETKPPRSKPWEGQ---------GESRPHRPKSAPASQEK--NPSPFRQSSPDVILL 65 Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAY----HVVDEAELTKAS 166 +G +A + +S + + ++ A +A + KA H+V +L++ Sbjct: 66 HGFHAVREALRSDQRTCLALYATEA-------AAEKLAPDSKAAGLAPHIVTAEDLSRRL 118 Query: 167 GTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 G++ H GV + + + +++G VL L+ ++PHN+G ++R+ A F V Sbjct: 119 GSQTVHQGVLLEARPLEPLDITEIPTRSG---VVLVLDQITDPHNVGAIVRTAAAFDVDA 175 Query: 226 VVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 +V + A G + A GG EHVQ + N+ L+ + Y V S Sbjct: 176 IVTTERHAPALGGVLAKAASGGLEHVQIVPVVNLARALETLGRLNYLRVGLDSAAEADFT 235 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + L + LVLG E GL R+ D ++D G + LN+S A V+L Sbjct: 236 QLPLQRPIALVLGGEGTGLRRLTREKCDFLARLDMPGKIKSLNVSNACAVVL 287 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 6/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + +YG N +SR + + + R A R A +D EL + Sbjct: 3 SLIYGVNPVLEALKSRQRKPLELLVLHGAESSRLSAVCEAARARRVAIRSLDRRELDALA 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 H GV ++ ++ ++ + AG + +L L+ ++PHNLG + RS G Sbjct: 63 EGARHQGVALRLESQSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAVGC 122 Query: 224 KGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG-K 281 +G+V+ +D + + AA + + G ++ N+ L+ F+QAG+ V + + G + Sbjct: 123 QGIVLPKDRSCPITAAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAGSQ 182 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ T L +VLV+G E +GL D R D + I G V+ LN SVA GV L E R Sbjct: 183 SLYDTDLRGNVVLVVGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEVLR 242 Query: 342 Q 342 Q Sbjct: 243 Q 243 >UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Bacteria RepID=Q6UCQ6_9PROT Length = 257 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 46/230 (20%), Positives = 100/230 (43%), Gaps = 4/230 (1%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV-DEAELTKASGT 168 +YG +A + +F + K ++ N + DE +L G Sbjct: 19 IYGHHAVVGALMNENRVKYEVYFTSEAEKKLKNEIKLENINVISIKKTRDEIDLL-LKGI 77 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQ-DCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H G+C ++K + +++ + + L+ +P N+G + RS F + G++ Sbjct: 78 SNHQGICMRVEKLQTPKLSDFINNLNEERSIIFLLDQLDDPQNVGAIFRSALAFNIDGII 137 Query: 228 VQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + ++ E+ +TA + V I NI + + + +GY + + + + +T Sbjct: 138 LTNTNSVTENSFLAKTASSALDKVPFIKIQNISSCIKILKDSGYWIYGLDMKAERSITET 197 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + P K+V +LG E +G+ D +KI + N+ LN+S +++ Sbjct: 198 TFPKKIVFILGSESKGMRKITDSLCDEGLKIKMSDNLESLNVSNTAAIIM 247 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 4/189 (2%) Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGM 214 D + L K S T H GV + ++ V + A G ++ L+ ++ +NLG + Sbjct: 86 DRSNLDKISTTHAHQGVIAYVAFKDYVEVDDILKIAQDKGEDPYIIILDGITDAYNLGSI 145 Query: 215 MRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPIT-GDNIVNVLDDFRQAGYTVV 273 +R+ G GVV+ + AA+ A GA P+ NI ++ ++ +V Sbjct: 146 LRTADAVGAHGVVIPKRRAIGLNAAVSKASAGAIEYVPVARVTNISQTIEYLKKKNIWIV 205 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 T KP F+ L + LV+G E EG+ + D V I G ++ LN +VA Sbjct: 206 GTDLSGEKPFFEADLKGPVALVIGSEGEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAA 265 Query: 334 VLLGEWWRQ 342 +++ E RQ Sbjct: 266 IIMYEIRRQ 274 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 9/246 (3%) Query: 103 QRAEETRVYGENACQALFQS-RPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEA 160 ++ E + G NA F+S +P + + + + + +R + + V++ Sbjct: 20 KKENENIIEGRNAVMEAFRSGKP--VDKLYVLDGCQDGAVRSIIREARKHDTILNFVEKD 77 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRS 217 L + S T H GV + V+ + A G ++ L+N +PHNLG ++R+ Sbjct: 78 RLNQLSETGKHQGVIASVAAYEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRT 137 Query: 218 CAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG-DNIVNVLDDFRQAGYTVVTTS 276 G GV++ + A + GA + P+ N+V ++D ++ G V Sbjct: 138 ANQAGAHGVIIPKRRAVGLTATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCAD 197 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + G ++ ++ + LV+G E EG+ +D D +I G++ LN SVA GVL Sbjct: 198 MD-GDVMYDVNMKGPIGLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLA 256 Query: 337 GEWWRQ 342 E RQ Sbjct: 257 YEIVRQ 262 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 1/145 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 +L L+N +PHN G +RS G+ +++ +D + + + A G AEH + + N Sbjct: 99 ILILDNVQDPHNFGACIRSAHSAGIDFIIIPKDNSAPVNATVKKVACGAAEHTKIVVVTN 158 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + ++ +Q G ++ + E L+ +L + +V G E G+ + D K+ Sbjct: 159 LARAIEKLKQLGVWIIGLAGEANDSLYSMNLADSVAIVAGAEGSGMRQRTKASCDFLAKL 218 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 G V+ LN+SVATG+ L E RQ Sbjct: 219 PMLGEVSSLNVSVATGIALYETVRQ 243 >UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=A8LF93_FRASN Length = 386 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 8/206 (3%) Query: 139 RFKEALRWMAANRKAYHVVD--EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ 196 R +A R A R VVD EL + GT H G+ + ++ A A Sbjct: 172 RIADARRL--AGRAGLAVVDIGRFELDRLCGTAPHQGLALSVPPFEYAHPDDVLAAAQAA 229 Query: 197 D--CVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPI 253 V+AL+ ++P NLG ++RS A FG GVVV + A + AA +T+ G A + Sbjct: 230 APGLVVALDGVTDPRNLGAVVRSAAAFGASGVVVPERRAAGVTAAAWKTSAGAAARLPVA 289 Query: 254 TGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA-KMVLVLGQEYEGLPDAARDPND 312 N+ L F ++G VV +++ L + + +VLV+G E +GL + D Sbjct: 290 RAVNLTRTLRSFAESGLFVVGLAADGEVSLDELQVATDPLVLVIGSEGKGLSRLVGECCD 349 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGE 338 LRV+I G V LN VATG+ L E Sbjct: 350 LRVRIPMAGQVESLNAGVATGIALSE 375 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 8/178 (4%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV LI Q++ ++ V+ L+ +PHNLG ++R+ GV GV+ Sbjct: 66 HQGVAALIAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADASGVDGVI 125 Query: 228 V---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 + + AL ++ A + + G +HV + N+ +D+ ++ GY V ++ Sbjct: 126 IPKRRSVALTQTVA--KASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAEADNATDYR 183 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + + +V+G E +G+ +D D +KI G+V LN SVA +++ E +R+ Sbjct: 184 DMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVYRK 241 >UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma pulmonis RepID=Q98R32_MYCPU Length = 229 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 93/177 (52%), Gaps = 7/177 (3%) Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV- 227 E+H G ++K N ++ Q + +++ +L L++ +P+N G ++RS FG+K ++ Sbjct: 57 ENHQGYVAVLKSLNFVSLDQMIK---SKETILILDHLEDPYNFGAILRSANAFGIKNIIY 113 Query: 228 -VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGKPLFK 285 ++ A + S ++ + GG +++ ++I +D ++ GY + ++S + + + K Sbjct: 114 PIKRAVDINS-TVLKVSSGGFVNLRFYKSNSISATIDKLKKQGYWIYSSSLDPTSEDINK 172 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 S VLV+G E +G+ + +D I G+V LN SVA G++ + ++ Sbjct: 173 ISFNNPSVLVIGNEKKGISQTTKKQSDQLFYIKTKGSVQSLNASVAAGIIFNLFTKE 229 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 1/164 (0%) Query: 180 KRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGA 238 K G V + + +L L+ +PHNLG ++R+ GV V+ +D ++ + Sbjct: 28 KALGEEVLDGILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITET 87 Query: 239 AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQ 298 +R + G AE V I N+ + + G + TS + + L++T LV+G Sbjct: 88 VLRVSVGAAEKVPFIQVTNLARTMKQLQSRGIWIFGTSDKGDRGLYETDFTGPAALVMGA 147 Query: 299 EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 E EG+ + D ++I G++ LN+SVATGV L E RQ Sbjct: 148 EGEGMRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQ 191 >UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH71_PLALI Length = 262 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 1/138 (0%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNI 258 LAL+ +PHN+G + R+ A FGV+G++ +D + SG A + GG E + N+ Sbjct: 120 LALDCLQDPHNVGAVFRAAAFFGVRGIIATRDRSAPLSGTAYDVSAGGLESIPFAQPPNL 179 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 L+ +++G V+ TS +PL ++V+G E GL + D I Sbjct: 180 ARALELAKKSGVWVLGTSEHAQQPLSSIKADRPWLIVIGNEEGGLRRLTLELCDEVCTIP 239 Query: 319 GTGNVAGLNISVATGVLL 336 G V LN+SVATG+LL Sbjct: 240 SQGAVGSLNVSVATGILL 257 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 109/254 (42%), Gaps = 17/254 (6%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R + E+ ++G + AL +S P+ I + + + +++R +A H + Sbjct: 2 RNQPEKEFIFGFHTITALLKSAPQKIDTLYCREDRQDKRVQSIRNLAK----LHGIPIGT 57 Query: 162 LTKASGTEH-----HGGVCFLIKKRNGTTVQQWVSQAGAQ-------DCVLALENESNPH 209 L+K E H GV IKK + Q + + +L L+ +PH Sbjct: 58 LSKVQCNEIAPNAVHQGVFAKIKKTSRLNEQDLMIFLHHRLHNNLNPPFLLVLDGVQDPH 117 Query: 210 NLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA 268 NLG +RS GV V++ QD A+ ++ +TA G AE T N+ L+ ++ Sbjct: 118 NLGACLRSANAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLFTVTNLATCLERLKKC 177 Query: 269 GYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 G + ++ L + LVLG E +GL + D V I G V LN+ Sbjct: 178 GIWCYGLDQSGTRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCDDLVAIPMVGTVGSLNV 237 Query: 329 SVATGVLLGEWWRQ 342 SVA GV L E RQ Sbjct: 238 SVAAGVGLFEVVRQ 251 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 12/219 (5%) Query: 138 PRFKEALRW-----MAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRN---GTTVQQW 189 PR K+ L + +K +D T H G+ + + N G +V ++ Sbjct: 41 PRVKKILEAARKLNLKIEKKDNQFLDSLTKTLPEQLRDHRGIVLVTEAENQKKGMSVDEF 100 Query: 190 VSQAGAQDC--VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGA 247 ++ + V+ L++ ++PHN G ++RS FG+ G++V + I GA Sbjct: 101 FAKLAEKGSAFVVILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGA 160 Query: 248 EHVQP-ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA 306 P + N+V ++ ++ G+ + + GK L + P K VL++G E G+ Sbjct: 161 LAWVPFVEVTNLVRTVERLKKEGFWIYGADA-GGKALPNLTFPKKTVLIMGNEGRGMSRL 219 Query: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 + D V I G + LN+SVA G+LL E R+ + Sbjct: 220 VEETCDEIVSIPTKGKLDSLNVSVAAGILLYEISRKKEV 258 >UniRef50_Q8EX27 rRNA methylase n=1 Tax=Mycoplasma penetrans RepID=Q8EX27_MYCPE Length = 238 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 5/142 (3%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESG-AAIRTAEGGAEHVQPITGDN 257 +L L+ +P N G + R+ F V G++ + ++ I+T+ G ++ + +N Sbjct: 91 ILVLDEIQDPGNFGAICRTSKSFQVAGIIFKKNNQIQINETVIKTSLGTVNYLNFLKVNN 150 Query: 258 IVNVLDDFRQAGY-TVVTTSSEQGKPL--FKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 + VL+ ++ Y TV T E+ PL FKT + K+V+++G E +G+ + + +D Sbjct: 151 LSEVLNKLKKENYWTVCTALDEKSIPLSKFKTDIN-KLVVIVGNENKGVSELIKKDSDFI 209 Query: 315 VKIDGTGNVAGLNISVATGVLL 336 VKI+ +V LN+SV+T ++L Sbjct: 210 VKIEMDSSVQSLNVSVSTAIIL 231 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 2/183 (1%) Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLGGMMRSCAH 220 L+ G HH GV +++ ++ + + G ++ ++ L+ +P NLG M+RS Sbjct: 65 LSALVGHAHHQGVALRMREFPYAALEALLEKPTGEREPLVILDCLQDPQNLGAMLRSACF 124 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G +GV+V +D + + IR A G ++ I +N+V L+ ++ G + ++ Sbjct: 125 LGARGVIVPRDRSARVTSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLDAQA 184 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + ++ L + LV+G E +GL D V+I G + LN + + + L E Sbjct: 185 AQTIYDADLTVPLGLVVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEV 244 Query: 340 WRQ 342 R+ Sbjct: 245 QRR 247 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 2/151 (1%) Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQP 252 G + VL L+ +P NLG ++R+ GV G+++ +D A + + +EG + Sbjct: 145 GEKPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPTVAKVSEGAIFSIPC 204 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 I N+ L D +Q G+ V + G F+ + LVLG E +G+ + +D Sbjct: 205 IMVTNLAAALKDLKQRGFWVYAADA-NGDSCFEQEFGGSVALVLGNEGKGISKLCLNESD 263 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +V I + LN+SVA G+L+ E R+N Sbjct: 264 YKVSIPMVNDFDSLNVSVAAGILMYEIVRKN 294 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 9/248 (3%) Query: 102 RQRAEETRVYGENAC-QALFQSRPEAIVRAWFIQSVTPRFKEALRWMA-ANRKAYHVVDE 159 R ++T +YG N +AL R + + ++ PR LR +A R VV+ Sbjct: 5 RDSEKQTVIYGRNPVREALRGGR--TLHKILVVRGADPRLFRELRELARPGRIPVQVVER 62 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 L + + H GV + ++ TV++ + ++ L +P NLG ++R+ Sbjct: 63 PLLDRLTDGGAHQGVAATVSVKDFATVEELLGTE--NPLIVVLNAIQDPRNLGAILRTAE 120 Query: 220 HFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 GV G VV + AA L + AA +TA G E++ NI L +F+Q G VV Sbjct: 121 AAGVDGAVVPSRRAAPL-TPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADP 179 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + L + LV+G E GL A R D V+I +G V LN SVA +L+ Sbjct: 180 DGPVSYWDADLGGPLALVIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIY 239 Query: 338 EWWRQNKA 345 E RQ +A Sbjct: 240 EAVRQRRA 247 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 56/241 (23%), Positives = 112/241 (46%), Gaps = 10/241 (4%) Query: 110 VYGENACQALFQSRPEA--IVRAWFI-QSVTPRFKEALRWMAANRKAY--HVVDEAELTK 164 ++G N + + + P+ I + F Q R E L+ A +K Y VV +L Sbjct: 3 LHGRNVLREILKLEPKKLKIKKVLFTDQKNVDRELEELKEHTA-KKGYRMEVVPPEKLFN 61 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ--DCVLALENESNPHNLGGMMRSCAHFG 222 S + H GV +K+ T+++ + + + ++ L+ +PHNLG ++RS G Sbjct: 62 LSREKKHQGVVINLKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAAG 121 Query: 223 VKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 GV++ + A +E + A ++ + G + + N+ ++ ++ G+ + E G+ Sbjct: 122 ADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATME-GE 180 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 P + S K L+ G E +G+ + +D V I + LN++ + ++L E+ R Sbjct: 181 PYYSVSFTDKAALIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRR 240 Query: 342 Q 342 Q Sbjct: 241 Q 241 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 5/192 (2%) Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESN 207 N K ++ +K S T+ G+ +++K+ V+ + +G + LEN + Sbjct: 59 VTNLKNVIMLSNHLFSKLSATKSPQGIMAIVEKK-YYAVEDIIKNSG---LFILLENIQD 114 Query: 208 PHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 P NLG ++RS FG K V V +A + S IR G H+ I NI N L+ + Sbjct: 115 PGNLGTIIRSADAFGAKAVFVSKGSADIYSDKTIRATMGSIFHLPIIDSINIKNTLNLMK 174 Query: 267 QAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGL 326 +V S + K L P K V+G E GL + D VKI GN L Sbjct: 175 NKKISVFAASLKGEKYLNDIKFPNKSAFVIGNEANGLRSETENSADTLVKIYMPGNTESL 234 Query: 327 NISVATGVLLGE 338 N + A +++ E Sbjct: 235 NAATAASIIMYE 246 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 7/187 (3%) Query: 162 LTKASGTEHHGGVCFL--IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 L + + H G VC + ++ + V V + G L L+ ++ N G + R+ Sbjct: 82 LDRFTRKNHQGVVCLIAQVQYVKLSNVIADVFERGEVPFFLLLDRITDVRNFGAIARTAE 141 Query: 220 HFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 G++ +V+ + AA + S A ++T+ G H+ ++ + +++G TVV + Sbjct: 142 CTGIQCIVIPGRGAAAINSDA-MKTSSGALNHISVCREPDLTETVKYLQESGITVVACTE 200 Query: 278 EQGKPLFK--TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + + L++ T L M +++G E +G+ D VKI G V LN+SVATGV+ Sbjct: 201 KSARDLYERTTDLTGPMAIIMGSEEDGISPELLRMVDTHVKIPLLGAVGSLNVSVATGVI 260 Query: 336 LGEWWRQ 342 L E RQ Sbjct: 261 LYEAVRQ 267 >UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D323_WIGBR Length = 250 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 12/242 (4%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHV--VDEAELTKAS 166 +YG + + +++ I+ F++S +FK+ + + +N K + VD+ L K + Sbjct: 5 IYGIHVIEEFIKNKSNKILCILFLKSRKDIKFKKLI--LISNEKNIKIKFVDKKFLNKIT 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD----CVLALENESNPHNLGGMMRSCAHFG 222 + H G+ IK N +++ ++ L L+ +P NLG +RS FG Sbjct: 63 NNKKHQGIVAYIK--NSKILKEPFLLKMLENKKNYFFLILDGIMDPRNLGSCIRSAYIFG 120 Query: 223 VKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V+ V++ ++ + S A + A G + + I N+V ++ ++ ++ TS + Sbjct: 121 VQAVIIRKNRSAKISSAVKKVASGSLDLIPLIYVTNLVRTINLLKKYNIQIIGTSRKAQL 180 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 + L + +V+G E G+ ++ D + I N LNISVATG+ + E R Sbjct: 181 DICNKKLKQSIAVVMGSENLGISRLVKENCDNILNIPTVKNNLPLNISVATGICIFEIIR 240 Query: 342 QN 343 +N Sbjct: 241 KN 242 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 114/243 (46%), Gaps = 13/243 (5%) Query: 103 QRAEETRVYGENACQALFQS-RPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDE 159 +R E ++G+++ A S RP I R W + + +F L+ + + V Sbjct: 184 ERNYEDWIWGKHSVFAALNSERP--INRIWCTSEIFSSEKFYLLLKDLKSKGVLIEEVPW 241 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMR 216 + L++ + H GV ++++ + + ++ ++AL+ ++PHN G ++R Sbjct: 242 SRLSQLTSGAVHQGVALQHASTESISLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIR 301 Query: 217 SCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 S F KG++V + A L +G + A G EH+ N+ +D+ ++ G+ ++ Sbjct: 302 SAEAFDCKGIIVPQRRSAGL--TGTVAKVAAGALEHIPVSRVVNLNRAIDELKKKGFIII 359 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 S + P+ + A +V+++G E +G+ + D +KI G + LN SVA Sbjct: 360 GLSGDGQVPISEFKEKAPVVVIVGAENKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAA 419 Query: 334 VLL 336 + L Sbjct: 420 ISL 422 >UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5X9_9DELT Length = 325 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 4/145 (2%) Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGD 256 ++ L+ +PHNLG ++R+ FG VV QD A S A+R++ G E + Sbjct: 179 IIVLLDGVQDPHNLGAVIRNAEFFGATAVVWGQDRAAPLSAVAVRSSAGATERLPLGQVT 238 Query: 257 NIVNVLDDFRQAG-YTVVTTSSEQGKPL--FKTSLPAKMVLVLGQEYEGLPDAARDPNDL 313 N+ L+ + +G + VV T ++G P+ F P+ M+LVLG E G+ R+ D Sbjct: 239 NVARALEQAKASGTWWVVGTVVDEGTPVHEFAQDPPSDMILVLGSEERGMRRLTRERCDF 298 Query: 314 RVKIDGTGNVAGLNISVATGVLLGE 338 V I G++ LN+S A V L + Sbjct: 299 LVTIARGGSLGSLNVSAAGAVALAK 323 >UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Y1_THEAS Length = 256 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 7/246 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 A + VYG N +L + + + + P + + A + VD L + Sbjct: 8 AGDDLVYGRNPVMSLLEGGGDCLKVLISRRRSDPVRERIVEICRARGIPFQEVDGKVLDR 67 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV-----LALENESNPHNLGGMMRSCA 219 GT H GV + ++ AGA D V L +++ +PHNLG M+R+ Sbjct: 68 MVGTSSHQGVVARVSPVGILKLEDLYRLAGASDPVAAFALLVVDHVEDPHNLGAMIRTAE 127 Query: 220 HFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ-AGYTVVTTSS 277 G V+ L +G ++ + G A V I N+ + ++ G V + Sbjct: 128 AAGFSAVLFPSRREALPTGVVVKASAGAALRVPLIMVGNVSQAIRRVKEDLGLWAVGLEA 187 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + +F LP ++ LV+G E +GL A D + I G LN+SVA G+++ Sbjct: 188 QGRASVFDERLPPRIALVVGSEGKGLSRVASAACDDILMIPMMGASGSLNVSVAAGIVMY 247 Query: 338 EWWRQN 343 +W++ N Sbjct: 248 QWYQGN 253 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 5/190 (2%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGG 213 V+ A L K +G HH GV L R ++ ++ +AG ++ L+ +PHNLG Sbjct: 52 VNRAALEKLAG-HHHQGVVALAAAREYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGA 110 Query: 214 MMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++RS G GV++ + + + A R A G E+V N+ L++ + G Sbjct: 111 ILRSAEAVGAHGVIIPRRRGVGLTAAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWA 170 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + + + G+ F +VLVLG E GL R D V + G + LN++ A Sbjct: 171 IGAAGDAGQEAFNADFTVPLVLVLGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAA 230 Query: 333 GVLLGEWWRQ 342 VL+ E RQ Sbjct: 231 TVLMYEVLRQ 240 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 8/185 (4%) Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRS 217 E+T T H + I K ++ ++A +L L+ S+PHN G ++R+ Sbjct: 56 VEMTTLVQTSKHQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRT 115 Query: 218 CAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPIT-GDNIVNVLDDFRQAGYTVVTTS 276 C F V GV++ D ++ A + GA + P+ +N+ N ++ ++ G+ + TS Sbjct: 116 CDLFNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATS 175 Query: 277 ---SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 Q K +P + L++G E G+ D + I G++ LN+SVA+ Sbjct: 176 LNTKAQNVSELKYDIP--ICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASA 233 Query: 334 VLLGE 338 +L+ + Sbjct: 234 ILIYQ 238 >UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWP6_PARL1 Length = 288 Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 1/146 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDN 257 V+ L+ ++PHN G ++RS A FG ++ + G + + A G E V+ N Sbjct: 142 VVVLDQVTDPHNFGAILRSAAVFGAGALITTERNSPSLGGVLAKAASGALELVRVARITN 201 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 +V +++ ++ G+ VV E L L ++ LVLG E GL R+ DL ++ Sbjct: 202 LVRAIEELKELGFEVVGLDGEGEASLPDLKLSPRVALVLGAEGAGLRRLTREHCDLLARL 261 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQN 343 G + LN+S A V L E +R+N Sbjct: 262 PAAGGMKSLNVSNAAAVALYELFRRN 287 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 8/237 (3%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELTKASG 167 +YG+N + + ++R + +F S T R KE + +A +Y L K + Sbjct: 3 IYGKNILKEIIEAR-YPVKHIFFSSSKTERGSLKEIVEDVANLGYSYSFSPNEVLEKMAL 61 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA-LENESNPHNLGGMMRSCAHFGVKGV 226 T H G+ +I N + G + L L+ +PHN G ++R+ GV + Sbjct: 62 TNKHQGI--VIDIGNDFKYENLDIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVDAI 119 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ +D A+ + I+ + G + I N+ N ++ ++ V E GKP ++ Sbjct: 120 IIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVE-GKPYYE 178 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 K+ LV G E G+ ++ D V I NV LN+SV++G++L E +Q Sbjct: 179 IDWQGKICLVFGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQ 235 >UniRef50_B1M5G3 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=B1M5G3_METRJ Length = 281 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 1/138 (0%) Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 ++PHN+G ++R+ A FGV G+V A +G ++A GG EHV +T N+ L + Sbjct: 142 TDPHNVGAIVRTAAAFGVAGIVTTARHAPGATGVLAKSASGGLEHVPFVTVRNLAEALIE 201 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 + G+T V S+ + L ++ +V+VLG E +GL + R D+ +I +G + Sbjct: 202 LGERGFTRVGLDSDAPESLDALTVARPLVIVLGAEGKGLRERTRGCCDVLARIPFSGAIR 261 Query: 325 GLNISVATGVLLGEWWRQ 342 LN+S A + L R+ Sbjct: 262 SLNVSNAAAITLYALGRK 279 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 66/247 (26%), Positives = 111/247 (44%), Gaps = 19/247 (7%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEA---LRWMAANRKAYHVVDEA---ELT 163 +YG +A A Q + R W VTPR + L + A + VVDE + Sbjct: 244 IYGRHAVLAALQGN-RTLNRIW----VTPRLRYESTFLELIDAAKAGGAVVDEVPVERIR 298 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAH 220 + + H G+ + + ++QA A ++ + ++PHNLG ++R+ Sbjct: 299 QLTDGAVHQGIAAQVAPYPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEA 358 Query: 221 FGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNV---LDDFRQAGYTVVTTSS 277 G G+V+ + AA+ GA P+ +VN+ L++ + AG+ + + Sbjct: 359 LGAHGLVIPQRRAVGVTAAVAKVAAGALESFPVA--RVVNLNRALEELKDAGFWIYGAAG 416 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 E + + +TS +VLV+G E EGL R+ D + I G LN SVA G++L Sbjct: 417 EAKQSIHETSFSGPVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLY 476 Query: 338 EWWRQNK 344 E RQ + Sbjct: 477 EVSRQRQ 483 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 12/210 (5%) Query: 143 ALRWMAANR-KAYHVVDEAELTKASGTEHHGGVCFL---IKKRN-----GTTVQQWVSQA 193 A+R +A +R V EA L S H GV + I+ R W + Sbjct: 42 AIRSIADDRGTPVQYVPEARLRHESDGATHQGVVAITAPIRYREVDAMLSDIAPTWDAVQ 101 Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQ 251 AQ +L ++ ++P N G M+RS G GV+V ++ A L + AAI+ + G A + Sbjct: 102 TAQPMLLVVDRVTDPRNFGAMLRSAVAAGTDGVIVPTREMAPLNA-AAIKASAGTAPRIP 160 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPN 311 D++ VL ++ GY V PL+ + +VLG E +GL + Sbjct: 161 IARTDDLPRVLTQLKERGYFVYGAEGTAETPLWDADWDRPVAVVLGSEGQGLAPEVAEAC 220 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 D + I G LN+SVATG+L+ E R Sbjct: 221 DELLSIPMRGPAESLNVSVATGLLVFEAAR 250 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 68/150 (45%), Gaps = 1/150 (0%) Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPI 253 G V+ L+ ++PHN G ++R+ G +GVV+ + + A GA P+ Sbjct: 104 GFAPLVVVLDEIADPHNFGAILRTAEASGAQGVVIGKRRQAQVTDVVAKAAAGALETLPV 163 Query: 254 T-GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 N+ L +QAGY +V E P + +V+G E +G+ R+ D Sbjct: 164 ARVANVAQALQRLKQAGYWIVGADVEAKVPYTEVDYRGPTAVVIGSEGQGMRRWVREQCD 223 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 V I G V LN SVA GVLL E RQ Sbjct: 224 FLVSIPILGRVQSLNASVAAGVLLYEAVRQ 253 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 16/254 (6%) Query: 103 QRAEETRVYGENACQALFQSRP---EAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDE 159 Q E+ VYG+N L +S ++ +V + + A K H Sbjct: 18 QPKNESLVYGKNPVTELLKSGSGVDTVLIAEGMAPAVAAYYTAMAKEAGATVKRVH---P 74 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMR 216 +L +GTE H GV + TV+ ++ A G ++ + +PHNLG +MR Sbjct: 75 NKLRLMTGTESHQGVAAFASEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDPHNLGAVMR 134 Query: 217 SCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 S G G+V+ + + I+++ G AE + NI + + G V Sbjct: 135 SALLCGAHGIVIPKRGGASVTPTVIKSSAGAAERLPVARVANIGETIRRLKDQG-VFVYC 193 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID----GTGNVAGLNISVA 331 + G PL K +L + LVLG E G+ + D V++D GTG V N+SVA Sbjct: 194 ADMDGVPLRKNNLTGPIALVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTG-VDSFNVSVA 252 Query: 332 TGVLLGEWWRQNKA 345 G++L E Q A Sbjct: 253 AGIILYEIQSQRAA 266 >UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Acetobacteraceae RepID=Q0BV71_GRABC Length = 441 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 6/188 (3%) Query: 157 VDEAELTKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 + A + + GTE H G+ L K + + ++Q VL L+ S+P N+G ++ Sbjct: 255 TERAHMDQLLGTESVHQGIALLADKLPSPPLGEILAQRPGP--VLVLDQVSDPRNVGAIL 312 Query: 216 RSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 RS A F V+VQD A ESG + A G + + + NI L + A VV Sbjct: 313 RSAAAFQACCVIVQDRNAPEESGTMAKAASGALDRLPMLRVVNIARTLAALKAADLWVVG 372 Query: 275 TSSEQGKPLFKTSLPAKMV-LVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 +E G PL +L + V LV+G E +GL R+ D V + + LN+SVAT Sbjct: 373 LDAE-GAPLSGPALGKRRVALVMGAEGDGLRRLTRESCDEIVSLAMAEGMESLNVSVATA 431 Query: 334 VLLGEWWR 341 + L E R Sbjct: 432 IALYEISR 439 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 110/236 (46%), Gaps = 11/236 (4%) Query: 107 ETRVYGENAC-QALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELT 163 E ++YG+NA +AL + P + + + + + +F E L V+ + + Sbjct: 2 EDKIYGKNAVLEALKSNIP--LNKIYIAKGIHFDNKFNEILNLAKEKGVPIKYVERSVIE 59 Query: 164 KASGTEHHGGVCFL--IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 K G G + + + R +++ ++ + ++ L++ +PHNLG + R+ Sbjct: 60 KMVGGNSQGVLAIISSVPYREWEDIEKTLNN---KSVIVVLDHIQDPHNLGAIARTSEFA 116 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G +V+ A + + A+ + + G ++ + NI N L + ++ G+ +V + Sbjct: 117 GASAIVIPKARSAGVTSASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTE 176 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + + + LV+G E EGL ++ DL VKI G V LN+SVA G++L Sbjct: 177 NLYNQVNYRFPLALVVGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIIL 232 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 88/331 (26%), Positives = 134/331 (40%), Gaps = 28/331 (8%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 NPR KG P K GR+ A + K P K ED P+ R+ A G Sbjct: 4 NPRAAKGKKGPSKGTGGLGRK-ALEGKGPTP---KAEDRPYHKAFRSKELSERSAAKRPG 59 Query: 89 ISGKSFIDPEVLRRQRAEETRVYGENAC-QALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 S S + RR R E V G N+ +AL P + V R KE L+ Sbjct: 60 SSSPSLQRTQ--RRGRPSEEMVTGRNSVVEALRAGIPAKALYIAVRIEVDDRVKEVLKLA 117 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT----TVQQWVSQ-----AGAQDC 198 + + EL + + H G+ I + Q+ V + Sbjct: 118 SERGIPLMETHKPELDRMTDDAVHQGLALQIPPYDYPDAIDIAQETVDKFKKGYIKNSPL 177 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 ++AL+ ++P NLG ++RS + F + V+V + ++ + +A +T+ G A V N Sbjct: 178 IVALDGITDPRNLGAIIRSVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPVARAGN 237 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMV------LVLGQEYEGLPDAARDPN 311 + L+ F+ GY V+ + SLPA V +V+G E +GL R+ Sbjct: 238 LNRALESFKGMGYFVLGLDGDG-----DVSLPALAVAKEPVCIVVGSEGKGLSRLVRENC 292 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 D V I + LN S+A G+ L E RQ Sbjct: 293 DQIVSIPIDSAMESLNASMAVGITLYEIARQ 323 >UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0619 Length = 262 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%) Query: 145 RWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALEN 204 +W+ + Y T S T+ G+ ++K+RN + + Q G L LE Sbjct: 69 QWITVSDNVY--------THISDTKTPQGLMAIVKQRNKSLNDFTIKQNGTY---LILEG 117 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 +P NLG ++R+ V + + +D L S +R G + I + + +D Sbjct: 118 IKDPGNLGTIVRTAYGLFVDAIFLTKDCVELYSPKVVRATMGAISKIDIIRNYEMTSYVD 177 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 FR+ + T Q L+ T +V+G E G+ + R D +KI N+ Sbjct: 178 FFRENKVKIYATDLYQSNNLYTTKFDGSSAIVIGNEATGISEYTRAQADSTIKIPTRDNL 237 Query: 324 AGLNISVATGVLLGEWWRQ 342 LN ++AT ++L E RQ Sbjct: 238 ESLNAAIATSIVLYEVARQ 256 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 10/238 (4%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 VYG+N +AL + + I S R KE + + + V ++ Sbjct: 5 VYGKNVVKALLADKKKV---YEIILSDGFRDKELEQEIRKRKIPCKVNSRKKMDTMFSGS 61 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H G+ I T+++ V+ G + L+ +PHNLG ++R+C GV GV+ Sbjct: 62 NHQGIAAKIDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVGVDGVI 121 Query: 228 V---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 + + L + A + T G + V+ N+ L ++ G+ V + + Sbjct: 122 IGKHRGVKLTPTVAKVST--GAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADFDNSQDYR 179 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + S +VLV+G E G+ + D V++ G+V+ LN SVA VLL + + Q Sbjct: 180 QASYDMPLVLVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQ 237 >UniRef50_B3EN44 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Chlorobiaceae RepID=B3EN44_CHLPB Length = 267 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 11/210 (5%) Query: 141 KEALRWMAANRK---AYHVVDEAELTKASGTEHHGGVC--FLIKKRNGTTVQQWVSQAGA 195 KE L + +R+ +++D E + SGT G+ F +KR+ + AG Sbjct: 60 KEQLSHIPQSRRYKEKIYLIDSDEARRLSGTSTAQGIVGIFSQQKRSAGEISSQEQHAG- 118 Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPIT 254 + VLAL++ +P N+G ++R+ + FGV VV A + AIR G + + Sbjct: 119 -ELVLALDDVQDPGNVGTILRTASWFGVSTVVCGPGTADRYNPKAIRAGAGSVFCLNHYS 177 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 ++ L+ R+AGY ++ +S + ++P + VLV+G E +G+ + DL+ Sbjct: 178 VGDLEKELEKMRRAGYHIICSSLHGTDFRLQHAVPERTVLVIGNEAKGVSMSILRKADLQ 237 Query: 315 VKI---DGTGNVAGLNISVATGVLLGEWWR 341 + I V LN +V+ G+LL E+ R Sbjct: 238 ITIPRGRKDAGVESLNAAVSAGILLSEFVR 267 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 1/147 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA-AIRTAEGGAEHVQPITGDN 257 V+ L++ + N G ++RS G V++ +A G A +T+ G H+ + N Sbjct: 223 VVLLDHVVDEGNFGAIVRSAEVVGASCVIIANARCASVGVGAYKTSAGAVLHMPIVQVVN 282 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + +D+ ++ G+ V+ S + ++ K+ L++G E G+ + D K+ Sbjct: 283 LARAIDELKEHGFWVIGASEHAQQTVWDAPFTGKVCLIMGSEENGISSLVQKKCDFICKL 342 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQNK 344 G + LN++ A V+ EW RQNK Sbjct: 343 PQRGRIESLNVAQAATVMCYEWMRQNK 369 >UniRef50_D0RNL1 SpoU rRNA Methylase family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNL1_9RICK Length = 242 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 4/180 (2%) Query: 161 ELTKASGTE-HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 E+ K T+ +H G IK+R + D ++ L N + N+G ++RSC Sbjct: 58 EIDKLFSTKINHQGYAVKIKERKTFQFSELRKNIIKYDEIIILNNVFDDRNIGSIIRSCV 117 Query: 220 HFGVKGVVVQDAALLESGAAI--RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 F VK ++V+ +G+ + ++A GG E++ N+ NV+ +Q Y V + Sbjct: 118 AFDVKCLIVEKNNF-RAGSELMNKSASGGMEYIDIYLVSNLNNVIKVLQQNAYWVYSLDG 176 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 E K +F K + G E +G+ + +D + I + LN+S + ++L Sbjct: 177 ESNKNIFDIKFNKKSAFIFGSEGDGIKSLVKKNSDEIISIPINKKIESLNLSNSVSIVLS 236 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 5/148 (3%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITG 255 ++ L+ +PHNLG ++RS FG V++ + A++ + +T+ G +++ + Sbjct: 86 LIILDKIEDPHNLGAIIRSAESFGFDAVIIPERRSASV--TSTVYKTSAGAINNIKVVRV 143 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 N+ + D + G+ + + E + L K+ LV+G E EG+ R+ D+ + Sbjct: 144 TNLTRTIKDLKDKGFWIYGLAGEAHSDISHADLRGKVGLVVGNEGEGISRLVRENCDMLI 203 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQN 343 I G V LN SVA + + E RQN Sbjct: 204 NIPMLGRVNSLNASVAAAISMYELLRQN 231 >UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodobacteraceae RepID=B6R0T8_9RHOB Length = 289 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 1/140 (0%) Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGD 256 VLAL+ ++PHN+G ++RS VV E G + +TA G + ++ + Sbjct: 140 LVLALDQVTDPHNVGAILRSAVALNADAVVTTRRHAPEEGPVLAKTASGALDMIKHVRIQ 199 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N+ +++ R GY + SE + + T+ K +LVLG E +G+ + R D + Sbjct: 200 NMSRFVEEMRDKGYQAIALDSEGPEAVENTAFTDKTLLVLGSEGKGVREGVRKSCDTLAR 259 Query: 317 IDGTGNVAGLNISVATGVLL 336 +D G + LN+S A + L Sbjct: 260 LDMPGEIKSLNVSNAAILSL 279 >UniRef50_B5JKI5 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKI5_9BACT Length = 258 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 5/184 (2%) Query: 160 AELTKASGTEHHGGVCFLIKK--RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRS 217 ++L+ S T GV L+ + + + + + + +AG +L L+ +P N G M+R+ Sbjct: 70 SQLSALSDTRSSQGVVALVSRVGMDFSELLKGLPEAGPARLLL-LDEVGDPGNCGSMVRA 128 Query: 218 CAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 FG+ GVV + A LE+G R GG ++ G ++ + + R++G V TT Sbjct: 129 ADWFGLDGVVFGKGCAELENGKTSRATMGGLFYLPVAVGVDLAAAVSELRRSGVQVFTTE 188 Query: 277 -SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 E L P + LV+G E G+ A + D ++ ++ G+ LN +VA V Sbjct: 189 LDESAVSLRDFEFPERCALVIGNEARGVSAAISELADGKLFVERFGSGESLNAAVAAAVF 248 Query: 336 LGEW 339 LG+W Sbjct: 249 LGKW 252 >UniRef50_B3PW50 23S rRNA (Guanosine-2'-O-)-methyltransferase n=25 Tax=Rhizobiales RepID=B3PW50_RHIE6 Length = 296 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 9/226 (3%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 ++ +YG + +A + ++ Q+ R + + + + +V E+ K Sbjct: 62 DQVYLYGLHTVRAALDNPERKKIKLSVTQNALARLEIDIEPLGI---PFEIVAPHEIDKV 118 Query: 166 SGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 G E H GV + ++ +L L+ ++PHN+G +MRS F Sbjct: 119 LGPEAIHQGVMLETRPLPVRRLEALKDSP----LLLVLDQVTDPHNVGAIMRSAVAFNAG 174 Query: 225 GVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V+ Q + ESG ++A G E + I N+ + L + + G++ + SE PL Sbjct: 175 AVITTQRHSPTESGVLAKSASGALELIPYIQITNLADALGELHKLGFSTIGLDSEGPAPL 234 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 T K+ LVLG E +GL R+ ++D G + LN+S Sbjct: 235 EGTFSGDKLALVLGSEGKGLRQKTRETVTALARLDMPGAIKSLNVS 280 >UniRef50_Q0ANM8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Hyphomonadaceae RepID=Q0ANM8_MARMM Length = 289 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 10/140 (7%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 +L L+ ++PHN+G ++RS A FG++ V++QD A G ++A G AE V + N Sbjct: 128 LLVLDQITDPHNVGAVLRSAAAFGIRAVIMQDRKAPPLFGTVCKSAVGAAERVAHVRVTN 187 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAK--------MVLVLGQEYEGLPDAARD 309 I + L +F +AG V+ + E L T+L A +VLV+G E +GL + Sbjct: 188 IADTLLEFSKAGRHVLGLAGEAELDL-ATALAAPDGKGWGPGLVLVMGSEDKGLRQRVAE 246 Query: 310 PNDLRVKIDGTGNVAGLNIS 329 D V+I T V LN+S Sbjct: 247 CCDQLVRIPMTDTVESLNVS 266 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 12/181 (6%) Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVKGV 226 HH G+ + V++ + +A A+ VL L+ +PHN+G ++R+ G GV Sbjct: 71 HHQGIIAHVAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGAHGV 130 Query: 227 VVQDAALLESGAAI-----RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 ++ G AI + + G E+V N+V + ++AG ++ ++ + + Sbjct: 131 IIPK----RRGGAITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPR 186 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 P F+ + L++G E +G+ R+ D V I G V LN SVA +L+ E R Sbjct: 187 PYFRQDFRGPVGLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVR 246 Query: 342 Q 342 Q Sbjct: 247 Q 247 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 2/145 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDN 257 +L L++ +P N+G ++R+ GV GVV+ E + A + T+ G EH++ N Sbjct: 99 LLLLDHIQDPQNVGTLLRTAEVVGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTN 158 Query: 258 IVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 + ++ + AG VV E+ + L + LVLG E GL R+ D V+ Sbjct: 159 LAATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVR 218 Query: 317 IDGTGNVAGLNISVATGVLLGEWWR 341 + G +A LN++VA ++L WR Sbjct: 219 LPMRGQIASLNVAVAGSIVLYHAWR 243 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 4/183 (2%) Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWV--SQAGAQDCVLALENESNPHNLGGMMRSCA 219 L K + ++H GV L+ Q+ + ++ + +L L+ +PHNLG + RS Sbjct: 53 LDKMAPGKNHQGVVALVSGYEYKDFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSAL 112 Query: 220 HFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 F G+++ + L + +T++G ++V N+ ++ ++AG+ + E Sbjct: 113 FFNFDGIIIPKHREALVNDTVYKTSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLE 172 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 G + K+ +++G E +G+ D +D +VKI LN SVA G+++ E Sbjct: 173 -GDNIKDVDFSGKVAIIIGNEGKGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYE 231 Query: 339 WWR 341 R Sbjct: 232 VIR 234 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 17/219 (7%) Query: 136 VTPRFKEALRWMAANRKAYHVVDEAELTKASGT----EHHGGVCFLIKKRNGTTVQQWVS 191 VTP ++AL +A R HV E+ + SG H GV G + + Sbjct: 99 VTPDRQKALEQVAPKRGDLHV-RLTEMAEFSGFLPQGAVHQGVALNGPPLEGDDLNGLME 157 Query: 192 QAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAE 248 A Q+ ++ L+ ++P N+G ++R+CA FG G+++QD + + G +TA G + Sbjct: 158 GALRQERPVLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMD 217 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL---------FKTSLPAKMVLVLGQE 299 V N+ L+ + G+ + + E L + P +V+V+G E Sbjct: 218 RVPFARVTNLSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSE 277 Query: 300 YEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 EGL + D VKI G LN+S AT + L E Sbjct: 278 GEGLRRLVAEHCDHLVKIPMPGGFESLNVSHATSIALYE 316 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 7/212 (3%) Query: 138 PRFKEALRWMAANRKAYHVVDEAELTK-ASGTEHHGGVCFLIKK--RNGTTVQQWVSQAG 194 PR E + + + V + L + A G H G V ++ + T + W+ Sbjct: 32 PRLNELIHLAKKHSIRFSFVPKEALARLAEGVPHQGVVAKMVAAGAQAVPTFEAWLKTVD 91 Query: 195 AQDC--VLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHV 250 + VL L+ ++PHNLG +R+ G V+V AA + S + A G + Sbjct: 92 METAPMVLLLDQVTDPHNLGACVRTAEAAGCAAVIVLKDHAADVHSPVVAKAACGALSRL 151 Query: 251 QPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDP 310 + N+ ++ +Q G+ V + E ++ L +V+G E +G+ R+ Sbjct: 152 PVLRVINMKRCIEQLQQQGFWTVGLAGEAELSIYDAKLSGATAVVMGSEDKGVRRLVRET 211 Query: 311 NDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 D + I G V LN+SVATGV L E RQ Sbjct: 212 CDQLIHIPMPGVVESLNVSVATGVALFEINRQ 243 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 14/181 (7%) Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV-LALENESNPHNLGGMMRSCAHFGVKG 225 G HH GV L+ ++ ++ + + +AL++ ++PHNLG ++RS G G Sbjct: 79 GRVHHQGVVALVGAFEYAALEDLIAAPRQRPALFVALDSVTDPHNLGAIVRSAHVLGADG 138 Query: 226 VVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 V++ +D A SG + + G E + N+ L+ +QA + ++ +G Sbjct: 139 VILPKDRAAQVSGVVTKVSAGATEQIAIAQVTNLARALEQLKQAEVWIAGLAAGEG---- 194 Query: 285 KTSLPA-----KMVLVLGQEYEGL-PDAARDPNDLRVKIDGTG-NVAGLNISVATGVLLG 337 TSLPA + LVLG E GL P AR D ++I G V LN+SVA GV L Sbjct: 195 ATSLPAFDATGALCLVLGAEGTGLRPLVART-CDFLIEIPMLGAGVGSLNVSVAAGVALY 253 Query: 338 E 338 E Sbjct: 254 E 254 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 3/188 (1%) Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC--VLALENESNPHNLGGMMRSC 218 +L + +G + H G+ + + ++ + D +L + ++PHNLG + R+ Sbjct: 63 DLEQMTGGKVHQGIAARVSVYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALARTA 122 Query: 219 AHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 GV G+++ +D A + AA++ + G E + NI VLD + AG + Sbjct: 123 LCAGVHGLIIPKDNAASPTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLDG 182 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + ++ + L + LV+G E G+ D + I T V LN SVA V + Sbjct: 183 RGEQTIYDSDLTGPLALVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAMY 242 Query: 338 EWWRQNKA 345 E +RQ +A Sbjct: 243 EAFRQRRA 250 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPI 253 Q L L+ +PHNLG +MR+ G G+V+ + A L + A + + G EH+ Sbjct: 96 QPFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVA-KASTGAIEHIPVA 154 Query: 254 TGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDL 313 N+ L++ ++ G VV T + + + LV+G E +G+ ++ D Sbjct: 155 RVTNLARTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDF 214 Query: 314 RVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +K+ G V LN SVA G+L+ E +R+ Sbjct: 215 LIKLPMAGKVTSLNASVAAGLLMYEVYRK 243 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 18/248 (7%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVT--PRFKEALRWMAANRKAYHVVDEAELT 163 E TR++G S+ + + FIQ P FKE R + V +L Sbjct: 3 ETTRIFGIRTVIEAIDSKKD--IEKVFIQKDLSGPLFKELNRNLKEGNYNISYVPVEKLN 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 K S +H GV I ++++ V ++ + L+ ++ N G ++R+ Sbjct: 61 KLSKNGNHQGVVANISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAEC 120 Query: 221 FGVKGVVVQDAALLESGAA------IRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 GV G+++Q E G+A ++T+ G ++ ++I + + + ++ Sbjct: 121 CGVTGIIIQ-----EKGSAPINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIA 175 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + + +F L + +++G E +G+ ++ D + K+ G++A LN+SVA G Sbjct: 176 ATEKTDDVIFDIDLKQPIAIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGA 235 Query: 335 LLGEWWRQ 342 L E RQ Sbjct: 236 FLYEAVRQ 243 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 10/243 (4%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAEL----TKA 165 VYG + +++ P I+ + + + PR + RK + E K+ Sbjct: 5 VYGIHTVESIVNQSPNRILIVYIVSN--PRDLRLKSLIYRIRKMNINIQECTRRVLNIKS 62 Query: 166 SGTEHHGGVCFLIKK--RNGTTVQQWV-SQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 + H G + +I N + ++ ++ +L L+ ++PHNLG +RS G Sbjct: 63 MKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADAAG 122 Query: 223 VKGVVVQDAALLESGAAIR-TAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V ++V A +R A G ++ V + N+ L ++ +V + + Sbjct: 123 VHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRSNQ 182 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 LF T L + LV+G E G+ R+ D V I + LN+SVATG+ L E R Sbjct: 183 ILFNTRLIDPIALVMGSESSGIRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFETVR 242 Query: 342 QNK 344 Q K Sbjct: 243 QRK 245 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 81/143 (56%), Gaps = 3/143 (2%) Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITG 255 D VL L++ +P N G ++RS FG K +++ +D A + + ++T+ GG ++V+ I Sbjct: 81 DKVLILDHIQDPQNFGAIIRSANVFGFKHIIIPKDRACDVTPSVLKTSSGGFKNVKVIKV 140 Query: 256 DNIVNVLDDFRQAGYTVVTTS-SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 +++ + +++ + G+ + ++ ++Q K L K+ +++G E G+ +D Sbjct: 141 NSLFDAIEELKNKGFWIYASALNQQAKKLNDAKFNEKIAIIVGNEGSGVSKTLLKHSDEI 200 Query: 315 VKID-GTGNVAGLNISVATGVLL 336 + I+ +V LN+SVATG+LL Sbjct: 201 IYIEQDKESVQSLNVSVATGILL 223 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 1/145 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPIT-GDN 257 +L L++ +PHNLG +RS A GV V++ ++ + + GA + P+ N Sbjct: 95 LLVLDSIQDPHNLGACLRSAAAAGVHAVLIPNSRAADVTPVVEKVACGATEILPLFRVSN 154 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + ++ ++ G VV + + L+ T L + +++G E EG+ R+ D V+I Sbjct: 155 LRREVERMQRQGIWVVGGAGGAAQSLYATDLTVPLAVIVGNEGEGIRHGLREQCDFLVQI 214 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 + LN+SVA GV+L E RQ Sbjct: 215 PMAEGMESLNVSVACGVMLFEARRQ 239 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 6/218 (2%) Query: 127 IVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTT 185 I+R + ++ R + +R A V + +L ASG H + + + + + Sbjct: 97 IIRVFLAGNALDERIGKVVRTATALGAPVLEVTKMDLENASGESAHQSIGIEVPEYDYCS 156 Query: 186 VQQWV--SQAGAQ-DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRT 242 Q + ++ AQ ++AL+ ++PHNLG ++RS FG+ GV++ + AA Sbjct: 157 AQDLLERTKENAQIPLIVALDQVTDPHNLGAVLRSGGAFGITGVLISERRSASVNAAAWK 216 Query: 243 AEGGAEHVQPITGD-NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA-KMVLVLGQEY 300 GA P+ + N+V L + ++AG VV L L +V+V G E Sbjct: 217 VSAGAAARVPVARETNLVRALGELKEAGCFVVGLDGGGDVSLRDLDLATGPLVVVTGAEG 276 Query: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 +GL R+ D V I + V LN +VATG+ L E Sbjct: 277 KGLSRLVRETCDQIVSIPISSAVESLNAAVATGIALYE 314 >UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY01_SYNWW Length = 264 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 6/191 (3%) Query: 155 HVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 +VVD+ + S TE G+ L + + + ++++SQ +L L+ ++P NLG + Sbjct: 74 YVVDKRLMKHISDTETPPGIVALCQIPSWSR-EEFLSQNAF---LLYLDRIADPGNLGTI 129 Query: 215 MRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +RS GV G+++ ++ S +R + GG ++ P+ D V+ L +Q YT Sbjct: 130 IRSGWALGVDGILLSPESVDPFSPKVVRASMGGIFNI-PLLLDFSVDELKRLKQNAYTFF 188 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 S + + +F +L +G E +G+ + D KI V LN +VA Sbjct: 189 CASLQARQEIFSLDFTGPSLLAIGSESQGVRPVIEEICDFNCKIPIKPGVDSLNAAVACA 248 Query: 334 VLLGEWWRQNK 344 +++ E W+Q + Sbjct: 249 IIINEAWKQRQ 259 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 8/178 (4%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV L+ +++ + + V+ L+ +PHNLG ++R+ GV V+ Sbjct: 66 HQGVAALVAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADASGVDAVI 125 Query: 228 V---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 + + AL ++ A + + G +HV I N+ +D+ + G+ + T + Sbjct: 126 IPKRRSVALTQTVA--KASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEANNATDYR 183 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + +V+G E +G+ D D +KI G+V LN SVA +++ E +R+ Sbjct: 184 DLQADMSLGIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVYRK 241 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 8/227 (3%) Query: 125 EAIVRAWFIQSVTPRFKEALRWMAANRKA-YHVVDEAELTKASGTEHHGGVCFL--IKKR 181 +AI R + ++ T +R +A ++V +L + H G V I Sbjct: 39 KAIERIFMLRGATGEIIPQIRQLAEQYNIPINLVPVEKLNGLTSANHQGCVAITGNINYL 98 Query: 182 NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD---AALLESGA 238 + V V++ G L L+ ++ N+G + RS G + +++ D AAL E Sbjct: 99 DLQDVISHVTEQGQTPLFLILDGITDVRNIGAIARSAVCCGAQAIIIPDRGIAALNEE-- 156 Query: 239 AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQ 298 AI+++ G E + ++++ +D G V+ + E L+ L + +++G Sbjct: 157 AIKSSAGALETISVCRVNSLLKAIDTLHLNGIKVIASEMEAETKLYDCQLQEPVAVIMGS 216 Query: 299 EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 E +G+ A +D I GN N+SVA G++L E +Q A Sbjct: 217 EDKGVFPALIKASDTLFHIPMAGNFESFNVSVAAGIILYEAMKQRGA 263 >UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_3644c n=102 Tax=Actinobacteridae RepID=Y3644_MYCBP Length = 322 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 5/239 (2%) Query: 103 QRAEETR-VYGEN-ACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA 160 +RA+ET V G N + L P + R E + A + A + A Sbjct: 62 KRADETETVLGRNPVLECLRAGVPATALYVALGTEADERLTECVARAADSGIAIVELLRA 121 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSC 218 +L + + H G+ + N ++ A Q ++AL+N S+P NLG ++RS Sbjct: 122 DLDRMTANHLHQGIALQVPPYNYAHPDDLLAAALDQPPALLVALDNLSDPRNLGAIVRSV 181 Query: 219 AHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 A FG GV++ Q + + A RT+ G A + N+ L + G V+ + Sbjct: 182 AAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDA 241 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 G L +V+V+G E +GL R D V I LN SVA GV+L Sbjct: 242 GGGTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNASVAAGVVL 300 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 2/149 (1%) Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITG 255 + VL L++ +PHN G ++R+ FG+K +++ ++ A + ++ + G ++ I Sbjct: 81 NLVLMLDHIQDPHNFGAIIRNANGFGIKHIIIPKNRACEVTPTVLKISSGAFTEIKIIRV 140 Query: 256 DNIVNVLDDFRQAGYTVVT-TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 ++ + L + ++ G+ + + T ++ L KT L++G E G+ +D Sbjct: 141 GSLFDTLKELQKNGFWIYSSTLDDKATKLHKTKFATPTCLIVGNEESGVSHTLIKHSDAL 200 Query: 315 VKIDGTGNVAGLNISVATGVLLGEWWRQN 343 V I+ G V LN++ AT VLL E ++N Sbjct: 201 VYIEQKGTVQSLNVASATAVLLYEATKEN 229 >UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax=Ehrlichia ruminantium RepID=Q5FFT7_EHRRG Length = 249 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/176 (23%), Positives = 86/176 (48%), Gaps = 2/176 (1%) Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQ-DCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 +H G+ + + +++ +S + ++ L+ ++ +N+G ++RS F V V++ Sbjct: 72 NHQGIALQVSIVDTVSIEDVLSNIPTEISTIILLDQVTDVYNVGSIIRSAVCFNVHAVIL 131 Query: 229 -QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 + E+ +T+ G + + + NI N + ++AGY ++QG+PL K Sbjct: 132 PYYNSPSENCGMSKTSSGAIDMIPIVYVVNISNAIHTLKKAGYWCYGFDAKQGEPLHKIK 191 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L K +++ G E +GL ++ D +KI + + LN+S A + L + QN Sbjct: 192 LDNKRLVIFGSENKGLRTLTKENCDFLLKIATSERIDSLNVSNAAAIALYSIFIQN 247 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 1/145 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIR-TAEGGAEHVQPITGDN 257 +L L++ +PHNLG +R+ GV VV+ ++ + +R A G AE + N Sbjct: 94 ILVLDSIQDPHNLGACLRTAMAAGVDAVVLPNSCAADITPVVRKIACGAAEALAIFRVAN 153 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + ++ ++ G VV + E K LF L +V+++G E +G+ R D I Sbjct: 154 LKREVEMMKEKGLWVVGGAGEAEKSLFDLDLSGGLVMIVGNEEKGIHYGLRQTCDWLAAI 213 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 + LN+SVA G++L E RQ Sbjct: 214 PMAETMESLNVSVACGIMLFEARRQ 238 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 5/185 (2%) Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAG---AQDCVLALENESNPHNLGGMMRS 217 +L SG+ HH GV L ++++ + + + V+ L+N ++PHN G ++RS Sbjct: 57 KLDSMSGSTHHQGVLALCSPVETISLRELIEKMNEKVTKPLVVILDNITDPHNAGAIIRS 116 Query: 218 CAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 G GV++Q G + +++ G EH+ NI +D ++ G VV Sbjct: 117 AYCAGADGVIMQTRRSASIGEGMYKSSAGAIEHIDLCEVSNIAQTIDTLKKEGLFVVGLD 176 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 G+ + + LV+G E +GL ++ D I + LN SVA G++L Sbjct: 177 M-NGENYYDMDYDMPLALVVGAEGKGLGRLIKEKCDFISSIPLKNDFDSLNASVAAGIVL 235 Query: 337 GEWWR 341 E + Sbjct: 236 FEAVK 240 >UniRef50_B0WW26 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0WW26_CULQU Length = 1272 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 5/138 (3%) Query: 210 NLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 NLGG+ RS FGV+ VV +D E A TAE +V + +V+ L + + Sbjct: 1129 NLGGLARSSEIFGVRQYVVGSLKDVESKEFQALSMTAEKWL-NVAELKSFQLVDYLREMK 1187 Query: 267 QAGYTVVTTSSEQG-KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325 GY +V G +P+ + PA+ VLVLG E EGLP D+ +I G V Sbjct: 1188 AKGYAIVGAEQTTGSRPIQQIQFPARAVLVLGHEKEGLPAHIISQLDIVAEIPQFGVVRS 1247 Query: 326 LNISVATGVLLGEWWRQN 343 LN+ V + + E+ RQ+ Sbjct: 1248 LNVHVTGAIFMWEYARQH 1265 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%) Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGD 256 +L L++ ++P N G ++R+ GV GV++ ++ + + + G AEHV I Sbjct: 99 TLLILDHLTDPQNFGAIIRTADAVGVDGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVS 158 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N+ + ++ ++ T + + +F+ + + LV+G E G+ + D Sbjct: 159 NLRQTISKLKEQWIWILGTDIDGDRGIFEENYNIPLALVVGNEASGMSPLVKKECDFIAN 218 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQ 342 I G V LN SVAT V+L E +RQ Sbjct: 219 IPMIGRVNSLNASVATAVVLYEIYRQ 244 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/244 (23%), Positives = 108/244 (44%), Gaps = 14/244 (5%) Query: 107 ETRVYGENAC-QALFQSRPEAIVRAWFIQS--VTPRFKEALRWMAANRKAYHVVDEAELT 163 E V G NA +AL R E + A +I + + K + N+ VD+ +L Sbjct: 58 EDIVIGRNAVIEAL---RGERTIEALYISNSKLEGSIKTIVGLAKENKILIKEVDKRKLD 114 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAH 220 G E H GV + + V + A G ++ L+ +PHNLG ++R+ Sbjct: 115 SMCGGEVHQGVIAKVTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAEL 174 Query: 221 FGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 FGV G+++ + A++ S +++ G EHV+ N+ + +++ ++ G + Sbjct: 175 FGVHGIILPKRRSASV--STTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADI 232 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + ++ +++G E G+ + D +KI G + LN SVA G+++ Sbjct: 233 RAEEYSYQVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMY 292 Query: 338 EWWR 341 E + Sbjct: 293 EVLK 296 >UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Neorickettsia RepID=C6V4C7_NEORI Length = 243 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 12/242 (4%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK---AYHVVDEAEL 162 E+ ++G++A A ++ PE + + FI R K+A+ R + ++ Sbjct: 4 EKIVIFGKHAAVAAIKN-PERNILSIFI----AREKKAVYLPLLERSRLPNISFCENTQI 58 Query: 163 TKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 K G + H G+ + +K + ++ + + V+ L++ ++P N+G ++RS F Sbjct: 59 AKICGRDALHQGIAVITEKLSQPELRDVLKNTNKRSLVMILDSITDPFNVGNILRSSKAF 118 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV +VV Q + E+ +TA G E + T N+ N + ++ GY Sbjct: 119 GVDAIVVKQRHSPSETSVIAKTASGALESIPVCTIANLTNAIKILQENGYFCYAMDGGAS 178 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPND--LRVKIDGTGNVAGLNISVATGVLLGE 338 L + P K+ VLG E +G+ + D L + + N +N+S A + + + Sbjct: 179 SKLTEIRFPNKVAFVLGSEGKGISHLLKTRCDQTLSIPMYADKNFDSINVSNAAAIAMFK 238 Query: 339 WW 340 ++ Sbjct: 239 FY 240 >UniRef50_A8PJ82 RNA methyltransferase, TrmH family protein n=1 Tax=Brugia malayi RepID=A8PJ82_BRUMA Length = 1402 Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 6/137 (4%) Query: 210 NLGGMMRSCAHFGVKGVVVQDAALLESG--AAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 NLGG+ R+C GV+ ++V D A ++ A+ + +++ + + N+L FR Sbjct: 672 NLGGICRTCEVLGVEKLIVADLAKIKDRDFMALSLSSENWMNLEESRPEELPNLLLSFRN 731 Query: 268 AGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGL 326 +GY ++ + PL K P+KMVL+LG E EG+P D V++ G+ L Sbjct: 732 SGYVIIGAEQTTNSTPLHKIRFPSKMVLLLGNEKEGIPMHLLGYLDKTVEVLQIGHTRSL 791 Query: 327 NISVATGVLLGEWWRQN 343 N+ V TG LL +R+N Sbjct: 792 NVHV-TGALL--IYRKN 805 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 4/190 (2%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNLGGMM 215 V A+L S H G+ + V + +AG V+ L++ ++ N G ++ Sbjct: 106 VPRAQLDALSSHGAHQGIALEVGNFPYADVADILDRAGDGPALVVVLDHVTDDGNFGAIV 165 Query: 216 RSCAHFGVKGVVVQD--AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 RS G GV++ + AA + G+ +T+ G H+ NI LDD + AG+ V Sbjct: 166 RSAEVVGAAGVIIANKRAAGVTVGS-YKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVS 224 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 S + ++ LV+G E +G+ + D K+ G LN++ AT Sbjct: 225 GASERAEGSCWDAPFEGRVALVMGSEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATT 284 Query: 334 VLLGEWWRQN 343 L EW R+N Sbjct: 285 ALCFEWLRRN 294 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 57/243 (23%), Positives = 111/243 (45%), Gaps = 9/243 (3%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHV--VDEAELTKAS 166 +YG NA + + + R S + + EA+ +AA R + V+ + L + + Sbjct: 23 IYGRNAVRECLLAGRRKVYRLLVAYSHSASQTLEAIESLAA-RSGLQIERVERSILDRLT 81 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 +H GV + + ++++ ++ + +D +L L++ +P N G ++R+ FG+ Sbjct: 82 HGANHQGVVIEASEFSYSSIEDLLASGELRGKD-ILMLDSLQDPQNFGTLLRTAEVFGIG 140 Query: 225 GVVVQDAALLESGAAIRTAEGGA-EHVQPITGDNIVNVLDDFRQAGYTVV-TTSSEQGKP 282 V++ + +E A+ A GA EH+ N+ ++ GY V+ E Sbjct: 141 AVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNLARTASKLKEYGYWVLGLEYDESSSV 200 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 ++ L + LV+G E G+ + R DL VKI G + LN +VA + L E ++ Sbjct: 201 IWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKIPQAGRIGSLNAAVAGSIALYEIYKS 260 Query: 343 NKA 345 + Sbjct: 261 KSS 263 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 4/190 (2%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGG 213 VD++++ K S T++ GV + ++ + + +A G + ++ L+ ++PHN G Sbjct: 51 VDKSKIDKMSKTKNPQGVIAIAQEYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGS 110 Query: 214 MMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGA-EHVQPITGDNIVNVLDDFRQAGYTV 272 ++RS G G++ + + A GA EH++ N+ +D ++ G V Sbjct: 111 IIRSAHLCGAHGIITEARNSCPITPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWV 170 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + K ++ + +++G E +G+ ++ D VKI G + N SVA Sbjct: 171 YAADNNAEKFVYDCDFKIPICIIIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAA 230 Query: 333 GVLLGEWWRQ 342 G++ E +Q Sbjct: 231 GIIFFEVLKQ 240 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 2/176 (1%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 H GV + + + + +AG A V+ L++ ++ N G ++RS G GVV+ Sbjct: 161 HQGVIVRTQPFAYADLSEIIQRAGSANALVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIA 220 Query: 230 DAALLESGA-AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 +A G A +T+ G H+ N+ L++ + AG+ ++ + +++ + Sbjct: 221 NARAARVGVGAYKTSAGAVLHLPIAQVSNLPRALEELKAAGFWTCGSTEHATQSVWEAPM 280 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 ++ LV+G E G+ + D K+ G V LN++ AT V+ EW R+ + Sbjct: 281 GGRLALVMGSEGSGISRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLRRTQ 336 >UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWK7_9RHOB Length = 271 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 29/202 (14%) Query: 133 IQSVTPRFKEALRWMAANRKAYH--VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWV 190 ++S+ PR AL M + A H ++ EA+ A G EH G Sbjct: 82 VESMMPR---ALDRMV-TKDAVHQGMILEADPLPAYGAEHLKGARL-------------- 123 Query: 191 SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEH 249 VLAL+ ++PHN+G ++RS VV + E G+ + ++A G + Sbjct: 124 --------VLALDQVTDPHNVGAILRSAVALDADAVVTTERHAPEEGSVLAKSASGALDM 175 Query: 250 VQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARD 309 ++ + N+ + + + G++ + S+ L +T K VLVLG E +G+ R+ Sbjct: 176 IKHVRVKNMARFIAEMKDEGFSCIALDSDGPASLEETPFSDKTVLVLGSEGKGVRQGVRE 235 Query: 310 PNDLRVKIDGTGNVAGLNISVA 331 L ++D G + LN+S A Sbjct: 236 ACGLTARLDMPGEIRSLNVSNA 257 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 17/245 (6%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAEL-TKASG 167 +YG +A QA+ + P+ + ++ RF+ ++ + + +V+ L + G Sbjct: 5 IYGIHAVQAILKRDPQLFKEVYLLERRNDQRFQCIIKQLKQKKIIIKIVNRQWLDMQVKG 64 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQ----AGAQD---CVLALENESNPHNLGGMMRSCAH 220 H G I R T +Q+ Q AQ +L L+ ++PHNLG +R Sbjct: 65 ATHQG-----IIARVQTNRRQFQEQDLPALLAQHTAPLLLVLDGVTDPHNLGACLRCADA 119 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV +++ ++ + + + A G AE + I N+ L ++ ++ T+ E Sbjct: 120 AGVNAIIIPRNRSAYLNATVKKVASGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEA 179 Query: 280 GKPLFKTSL--PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 +++TS + + LV+G E G+ + + ++I G+VA LN+SVA GV L Sbjct: 180 DSHIYQTSFKFTSPIALVVGAEGNGIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLF 239 Query: 338 EWWRQ 342 E RQ Sbjct: 240 EVVRQ 244 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 19/249 (7%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAEL--- 162 EE V G NA L + P + + V R + R +A ++A V ++ Sbjct: 11 EEGLVLGRNAVIELLKG-PREVECIYICDDVPARGQPISRIVALAKEARVPVKRVDVRRL 69 Query: 163 -TKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSC 218 T A+G H G V + TV++ ++A A+ ++ ++ +PHNLG ++R+ Sbjct: 70 DTLANGLNHQG-VAAQAAAFHYCTVEELFARAAARGEPPLLVIADSIEDPHNLGAIIRTA 128 Query: 219 AHFGVKGVVVQDAALLESGAAI-----RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 G G+++ GA + RT+ G EH+ N+V+ + + + G + Sbjct: 129 EAAGAHGLIIPK----RGGAGLTAIVGRTSAGAVEHLPVARVTNLVSTIKELKARGVWIY 184 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 + G +T L LV+G E GL R+ D + + G V LN SVA G Sbjct: 185 GADA-SGARWDQTDLTGPSALVIGSEGFGLSRLVRETCDALLSLPMRGEVNSLNASVAAG 243 Query: 334 VLLGEWWRQ 342 +L+ E RQ Sbjct: 244 ILMYEAVRQ 252 >UniRef50_D0NTV0 SpoU rRNA Methylase family n=17 Tax=Phytophthora infestans T30-4 RepID=D0NTV0_PHYIN Length = 1346 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 8/140 (5%) Query: 210 NLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGA------EHVQPITGDNIVNVLD 263 NL G+ R+C F + +VV + + + A E V+P GD++ L Sbjct: 1197 NLAGLARTCEIFNAQKLVVPNLRMTQQDVTFVNVSATAHKWMPLEEVRP-QGDDLRRALV 1255 Query: 264 DFRQAGYTVVTT-SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 +++ GYT+V + L +LP KMVLVLG+E EG+P D+ V+I G Sbjct: 1256 RWKREGYTIVAVEQTASSVSLASYTLPRKMVLVLGREKEGIPVEVLQLVDVCVEIPQFGL 1315 Query: 323 VAGLNISVATGVLLGEWWRQ 342 V LN+ V+ ++L E+ +Q Sbjct: 1316 VRSLNVHVSGALVLWEYTQQ 1335 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 64.3 bits (155), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 6/142 (4%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPIT-GDN 257 ++AL+ ++PHNLG ++RS A FG GV++ + AA GA + P+ N Sbjct: 208 LVALDQVTDPHNLGAVLRSAAAFGADGVIIPEHRAASVNAAAWKVSAGAAAIVPVAQATN 267 Query: 258 IVNVLDDFRQAGYTVVTTS--SEQGKP-LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 + L D ++AG V+ + P L T +P +V+V G E G+ RD D Sbjct: 268 LTRALQDLKRAGAFVIGLDGGGDVALPDLQLTDVP--LVVVTGSEGRGISRLVRDTCDQI 325 Query: 315 VKIDGTGNVAGLNISVATGVLL 336 V I + LN +VATG+ L Sbjct: 326 VSIPIAPRMESLNAAVATGIAL 347 >UniRef50_Q6MIZ9 RNA methyltransferase, TrmH family, group n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIZ9_BDEBA Length = 297 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 9/198 (4%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 V G +A + + RP+ + W Q + ++ N + EA L K G Sbjct: 56 VIGTHAINEVLKVRPKQVKGFWLRQGFENSGDLRDMNELALKNHIKVELKAEAALEKF-G 114 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGA-QDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 G F+ +G S G + VL L+ +PHNLG ++R+ G +GV Sbjct: 115 PSQQGAAIFV----DGAPEFDMASLEGLDKSMVLILDGIEDPHNLGAILRTSWLVGAQGV 170 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ +D A+ + + A GG EHV N N ++ ++ GY + S + +F+ Sbjct: 171 LIPEDRAVGLTPTVHKVACGGVEHVPVEETTNFANYAEELKKQGYWIYGLSPRGKRSIFE 230 Query: 286 TSLPAKMVLVLGQEYEGL 303 LP K+V +G E +G+ Sbjct: 231 LELPDKVVWAIGSEDKGM 248 >UniRef50_Q2G8L5 RNA methyltransferase TrmH, group 3 n=9 Tax=Sphingomonadales RepID=Q2G8L5_NOVAD Length = 271 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 3/133 (2%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 ++ L++ ++PHN+G ++RSCA F V +V QD A ESG ++A G E V + N Sbjct: 125 IVVLDSVTDPHNVGAILRSCAAFDVAALVTQDRHAPPESGTLAKSASGALEIVPWVRVVN 184 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA-KMVLVLGQEYEGLPDAARDPNDLRVK 316 + L+ + GY + + GK +F +LP+ + LVLG E EGL D + Sbjct: 185 LSRALERMSEEGYWRIGLDGD-GKAVFPAALPSGPVALVLGAEGEGLRHNVAQHCDSIAR 243 Query: 317 IDGTGNVAGLNIS 329 + + LN+S Sbjct: 244 LPIASAIESLNVS 256 >UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2 Tax=Archaeoglobaceae RepID=Y2399_ARCFU Length = 224 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 4/146 (2%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGD 256 +L L+N + N+G +R+ FG GVV+ + ++ GA ++ + G H+ + Sbjct: 79 ILFLDNVVDQRNIGACIRTAEFFGAAGVVLPKRRVGSIQEGA-VKASAGAVFHIPIARVE 137 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N + + ++ G+T + + G+ L SL +V+G E G+ + D VK Sbjct: 138 NFASAIKKLKKLGFTTLAADLD-GEDLEAVSLLLPAAVVIGGEDRGVSRPVKKQCDFVVK 196 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQ 342 I G G V LN+SVA G+ L RQ Sbjct: 197 IPGVGKVNSLNLSVAAGIFLYTLSRQ 222 >UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax=Leptospira RepID=Q04SA9_LEPBJ Length = 253 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 75/140 (53%), Gaps = 5/140 (3%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGD 256 L L+ +P NLG ++R+ FGV +++ + A + + + + G ++ T Sbjct: 109 LVLDRIQDPGNLGNILRTAECFGVTNIILPERESAGI--TPVVEKVSSGALSFLKIFTVK 166 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N+ N L+ ++ GY +V+TS + K ++ +++G E EG+ + +D ++ Sbjct: 167 NLANTLELLKENGYWIVSTSDRGTENWSKLPELKELAILMGNEGEGVKRILLEKSDFVLR 226 Query: 317 IDGTGNVAGLNISVATGVLL 336 I GN++ LN++VATG++L Sbjct: 227 IPIHGNLSSLNVTVATGIVL 246 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 14/228 (6%) Query: 128 VRAWFIQ------SVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFL---I 178 ++ FIQ V KEA R+ +KA + L K + + H G+ + I Sbjct: 20 IKKIFIQEGVRGKKVDRIIKEASRFNIPLQKA----KKDFLDKKARSHSHQGIIAMADDI 75 Query: 179 KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA 238 K + + + + G ++ L+ +PHNLG ++R+ G G++ + Sbjct: 76 KYVSPREMVEIAREKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHGLIYPRKRSADITP 135 Query: 239 AIRTAEGGAEHVQPITG-DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLG 297 + A GA + P+ NI + D + G + T +P + + LV+G Sbjct: 136 VVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRGTRPYYSADYKGPVGLVIG 195 Query: 298 QEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 E +G+ ++ D V I +G + LN SVA GV++ E RQ ++ Sbjct: 196 NEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRRS 243 >UniRef50_Q8KTG3 Putative tRNA/rRNA methyl transferase (Fragment) n=1 Tax=Tomato big bud phytoplasma RepID=Q8KTG3_TOBBP Length = 210 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 7/167 (4%) Query: 184 TTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRT 242 + + + +G D +L L++ +P N G ++RS FG K + + ++ + + I+ Sbjct: 39 VAICKMLKFSGFSDKILILDDIQDPSNAGLLLRSACAFGFKNIFFSNNSVDIYNEKTIQV 98 Query: 243 AEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA-----KMVLVLG 297 ++G ++ GD + N L ++ Y V+ T + L + K+ L+LG Sbjct: 99 SQGAIFNLDFFRGD-LANFLSFLKKNDYFVIGTCGHENNFLSNNLINICSKYYKIALILG 157 Query: 298 QEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 E +G+ +R +D + I T V LN++VA +++ W NK Sbjct: 158 NEGQGISVISRQKSDYLIAIPTTNLVESLNVAVAGSIIMFYMWATNK 204 >UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, group 3) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBT7_DESAH Length = 253 Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 1/147 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 +L +E +P N G ++R+ GV +++ ++ + S + R + G EH + N Sbjct: 104 ILVIETLEDPQNFGALIRTALCAGVDHIMIPKERSASPSPSVSRASAGAMEHAEISLITN 163 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 +L + G+ V + PLF L +VLV+G E++G+ + D V + Sbjct: 164 TAGLLRQLKAMGFWVAGLDGQGTTPLFSADLTGNLVLVVGGEHKGIRPLVKKECDFLVSL 223 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQNK 344 V LN SVA G+ + E RQ + Sbjct: 224 PIKAGVTSLNASVAGGIAMYEALRQRQ 250 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 6/179 (3%) Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 ++H GV I ++Q + Q G +L L+ ++ N G + R+ GV Sbjct: 82 KNHQGVVAFISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECVGVHA 141 Query: 226 VVVQD--AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +++ + AA + S A I+T+ G +++ N+ + +D +Q+G V + S + K + Sbjct: 142 IILPEKGAAPINSDA-IKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQKLI 200 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + +V+G E G+ +D ++K+ G LN+SVA G +L E RQ Sbjct: 201 YDVDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAVRQ 259 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 11/185 (5%) Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G V + + V++ ++ A G +L L+ +P NLG ++R+ GV Sbjct: 88 VRHQGAVAY-VAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGVH 146 Query: 225 GVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 G+++ L E+ A R + G E+V NI + ++ G+ + + G+ Sbjct: 147 GILLPRRHSVPLTETVA--RVSAGALEYVPVARIGNIAQTIRALKEQGFWI-AGADMGGE 203 Query: 282 PLF-KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 ++ + +L +VLV+G E G+ RD D V++ G + LN SVA +L+ E Sbjct: 204 EIYDRANLTGALVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQ 263 Query: 341 RQNKA 345 RQ +A Sbjct: 264 RQRRA 268 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPIT 254 + VL L+ +P N G ++RS F V +++ + ++ + ++T+ G E+V Sbjct: 87 KSLVLILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISK 146 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 N+ + ++ ++ Y V + E + + K++LVLG E G+ R+ D Sbjct: 147 VTNLSDTINKLKKLDYWVYGAAGEASINYNEENYSNKIILVLGNEGSGIRKKVREHCDKL 206 Query: 315 VKIDGTGNVAGLNISVATGVLLG 337 +KI G + LN+SVA+G+LL Sbjct: 207 IKIPMYGQINSLNVSVASGILLS 229 >UniRef50_Q10T58 RNA methyltransferase, TrmH family protein, expressed n=2 Tax=Oryza sativa Japonica Group RepID=Q10T58_ORYSJ Length = 1727 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 190 VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEH 249 + Q+ Q V+A + P NL G+ R+C F G+ V D +++E R AE Sbjct: 1568 IKQSQQQLIVVASLVDRIP-NLAGLTRTCEIFKAVGLAVADKSIIED-KQFRLISVTAEK 1625 Query: 250 VQPITGDNIVNV---LDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 P+ + +V L+ R GY+V+ + KPL S P+K VLVLG+E EG+P Sbjct: 1626 WLPMMEVPVNSVKVFLEKKRLEGYSVIGLEQTANSKPLDHFSFPSKTVLVLGREKEGIPV 1685 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 D V+I G V LN+ V+ + + E+ RQ + Sbjct: 1686 DIIHVLDACVEIPQLGIVRSLNVHVSGAIAVWEYTRQQR 1724 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 6/150 (4%) Query: 191 SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGA 247 S+ A+ +AL+ ++P NLG ++RS A FGV GV++ + A++ + AA + + G A Sbjct: 169 SRLSARPLFIALDGITDPQNLGAVIRSAAAFGVNGVILPERRSASV--NAAAWKVSAGAA 226 Query: 248 EHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAK-MVLVLGQEYEGLPDA 306 H+ N+ ++ ++ GY + K + +T +V+VLG E +GL Sbjct: 227 AHMPIARVVNLTKAIEALKERGYYSIGLDGGGSKLVGETGFETDPLVVVLGSEGKGLSRL 286 Query: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 R+ D I T V LN SVA G+ L Sbjct: 287 TREACDAIASIPITSAVESLNASVAAGIAL 316 >UniRef50_Q22484 Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q22484_CAEEL Length = 1225 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 5/139 (3%) Query: 208 PHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITG---DNIVNVLDD 264 P+NLGG+ R+ FGV +VV D L+ A + +E+ Q I G N++ L + Sbjct: 1082 PNNLGGICRTSEIFGVDTLVVADV-LVAQDANFKALSMSSENWQKIEGVKRTNLLPYLQN 1140 Query: 265 FRQAGYTVVTTSSEQGKPLFKT-SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 R GYTV+ + P K V+V+G E EG+P D V+I G+ Sbjct: 1141 LRANGYTVIAAEQTTDSVMMHDFVFPKKAVIVMGDEKEGVPVNLLRAVDQTVEIKQVGHT 1200 Query: 324 AGLNISVATGVLLGEWWRQ 342 LN+ V +++ ++ Q Sbjct: 1201 RSLNVHVTAALMIAKFAEQ 1219 >UniRef50_A6BZU1 Gm2251 methyltransferase of 23S rRNA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZU1_9PLAN Length = 251 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 3/171 (1%) Query: 172 GGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKGVVV- 228 G L+K R + + +G + LAL+ +PHN+G + R+ A FGV+G+V+ Sbjct: 73 AGSVALVKPRTPFVLNELFPDSGQETGGLWLALDCIQDPHNIGAIFRTAAFFGVRGIVLT 132 Query: 229 QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 +D + + A GG E V N+ + ++ G ++ TS + + S Sbjct: 133 KDRSAPINATVYDVASGGMEAVPFAVETNLSRSMTQAKETGVWIMGTSEHAEEDVSVYSQ 192 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 ++V+G E +GL + D+ ++ TG V LN SVA G+++ + Sbjct: 193 DRPWMVVIGNEEKGLRRLTLEQCDVVTRLTPTGIVDSLNASVAAGIMIARF 243 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 27/272 (9%) Query: 92 KSFIDPEVLRRQRAEETR-------VYGENAC-QALFQSRPEAIVRAWFIQSVTPRFKEA 143 + DP + R+R ++ VYG N+ +AL P + + R +E Sbjct: 49 RQMADPRLAARRRVDKFASADTSDLVYGRNSVLEALRVGVPSSTLYIMSRIEHDDRTREI 108 Query: 144 LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---------- 193 ++ N D E+ + + + +H GV + +++ + +A Sbjct: 109 VKIAGMNGLHMLEADRLEMDRIARSGNHQGVILKVDPFQYSSLNELADRAEKKAKAMEAA 168 Query: 194 -------GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEG 245 A+ +AL+ ++P NLG ++RS A FG GV++ + + + AA + + G Sbjct: 169 NSAAARIAARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVNAAAWKVSAG 228 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAK-MVLVLGQEYEGLP 304 A H+ N+ L+ ++ GY VV K + +T + +V+VLG E GL Sbjct: 229 AAAHMPVARVVNLTKALEGLKERGYYVVGLDGGGDKLVGETGFESDPLVVVLGSEGSGLG 288 Query: 305 DAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 R+ D I + +V LN SVA G+ L Sbjct: 289 RLVRETCDAIAGIPISSSVESLNASVAAGISL 320 >UniRef50_A5V919 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alphaproteobacteria RepID=A5V919_SPHWW Length = 247 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 1/132 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 ++ L+ ++PHN+G ++RS A F G+V QD A ESGA R+A G E V + N Sbjct: 102 LVVLDQVTDPHNVGAVLRSAAAFDAVGIVTQDRHAPPESGALARSASGALELVPWVRVVN 161 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + LD+ +AG+ + S L + +++ +VLG E EG+ D K+ Sbjct: 162 LARALDEIAEAGFWRIGLSGHARGTLAQVMGDSRIAIVLGAEGEGMRQNTEAHCDELAKL 221 Query: 318 DGTGNVAGLNIS 329 + V LNIS Sbjct: 222 PISPKVESLNIS 233 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 5/180 (2%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV + T+ + +A G ++AL+ ++PHNLG ++RS FG GV+ Sbjct: 147 HQGVAIEVPAYGYTSALDLLDRARAVGHTPLLVALDQVTDPHNLGAVLRSTGAFGGDGVI 206 Query: 228 VQDAALLESGAAIRTAEGGAEHVQPITGD-NIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + + A + GA P+ + N+V L+ ++ G VV + Sbjct: 207 IPERRSVGVNATVWKVSAGAAARVPVARETNLVRTLETLKKEGCFVVGLDGGGETLMEDL 266 Query: 287 SLP-AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 SL + +VLV G E GL R+ D+ I + V LN +VATG+ L E R +A Sbjct: 267 SLADSPLVLVTGAEGAGLSRLVRETCDVIASIPISQTVESLNAAVATGISLYEVDRLRRA 326 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 6/209 (2%) Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQ 196 PR + L +AA V + K + TE G +C + KKR T Q+ + Sbjct: 62 PRVQATLEILAAKGCRIFPVADNVYAKITDTEQPQGILCVMEKKRY--TFDDL--QSSDR 117 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITG 255 + ++ L+N +P N+G ++R+ G GV++ + A L SG +R G H+ ITG Sbjct: 118 ELIVVLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVRATMGSLFHLPVITG 177 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 V + G ++ T+ + L + + +V G E G+ + D R+ Sbjct: 178 VAEQEVAAFLERQGIRLLATALDSSSLYHDVDLRSPVAIVFGNEGAGVSKVILEKADERL 237 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQNK 344 I G LN++VA V+L E RQ + Sbjct: 238 YIPLYGRAESLNVAVAAAVILYEARRQRR 266 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 18/232 (7%) Query: 120 FQSRPEAIVRAWFIQSV--TPRF--KEALRWMAANRKA----YHVVDEAELTKASGTEHH 171 F+ EAI ++I + + F +E ++ N K Y V DE L S TE+ Sbjct: 35 FRFVKEAINSEFYISQIFLSEYFTNREERFFLERNNKVKCPIYFVTDEI-LRSISCTENP 93 Query: 172 GGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA 231 G+ ++K + ++ Q + + +P N+G ++RS G G++ Sbjct: 94 QGIIAVVKNKE-------LNIKDEQGFYILADRIQDPGNMGTIIRSAHASGALGIITTKG 146 Query: 232 AL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA 290 + + + +R G ++ PI D + + RQ G+ ++++S + + L Sbjct: 147 TVDVYNEKTLRATMGSIFYI-PIIQDENLEKVSTLRQMGFKLISSSLDSDINFYDMDLRG 205 Query: 291 KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 K+++ +G E GL + +D+ V I GN LN +VA +++ E RQ Sbjct: 206 KIIIAIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEVVRQ 257 >UniRef50_A3EV98 Putative TRNA/rRNA methyltransferase (SpoU) n=2 Tax=Leptospirillum sp. Group II RepID=A3EV98_9BACT Length = 192 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 2/139 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDN 257 ++A++ +P NLG ++R+C GV+GV++ + S +T+ G + I N Sbjct: 47 LVAVDGVQDPRNLGALLRTCDAAGVQGVLLPKRRVAPLSPVCAKTSSGALFTIPLIRVGN 106 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + L R+ GY V + + G ++ PA +V+V+G+E +G+ +D +V + Sbjct: 107 LSQSLMYLRKRGYGVASLA-LGGSTAYRDPFPAPLVVVVGEEEKGVSRPVLQQSDWKVSL 165 Query: 318 DGTGNVAGLNISVATGVLL 336 G V+ LN+SVA G+ L Sbjct: 166 PMRGKVSSLNLSVALGIFL 184 >UniRef50_Q6KIE3 SpoU class tRNA/rRNA methylase n=1 Tax=Mycoplasma mobile RepID=Q6KIE3_MYCMO Length = 230 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 95/185 (51%), Gaps = 5/185 (2%) Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 L + T H V L K+ N +++ + D VL L++ + N G ++RS F Sbjct: 49 LNELVKTNHQNIVAEL-KEFNYFSLENIIKDKA--DKVLILDHIQDSFNFGSILRSANAF 105 Query: 222 GVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G +++ +E + A++ + GG +V+ I D+++ ++ ++ G+ + + ++ Sbjct: 106 GWNYIIIPSKRSVEINDVALKVSSGGFYNVKIIKIDSLIVAINFLKEHGFWIYGSMLDEN 165 Query: 281 KPLFKTS-LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K + + + L++G E+ GL + D++VKI +G V LN +VATG+LL + Sbjct: 166 SFEIKNAPINFPIGLIIGNEHSGLSKTMINSLDVKVKIMMSGTVQSLNAAVATGILLHDL 225 Query: 340 WRQNK 344 ++++ Sbjct: 226 SKKSR 230 >UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ1_HIRBI Length = 272 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 24/265 (9%) Query: 101 RRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR-----WMAAN----- 150 ++ A+ T+ +N + +Q PE V W + +V K R + N Sbjct: 7 KQSFADNTKKNYKNQKKPTYQQLPEGEVWIWGVHAVASALKNNSRKKIRAFFTRNGAQKL 66 Query: 151 -RKAYHVVDEAELTKASGTEH-------HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 A H+ A+L + H GV ++ +G + + A + ++ L Sbjct: 67 GLDAEHLPHYAQLADPKDIDKLVPPDSVHQGVVLHARELDGVDFEDVL--ANGEGPIVIL 124 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQP-ITGDNIVNV 261 + ++P N+G + RSCA FG K V++Q G A+ A GA + P + NI Sbjct: 125 DQVTDPQNVGAVFRSCAAFGAKAVIMQTRNSPNLGGALAKAAVGAIDIIPEVAVVNISRA 184 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKT-SLPAKMVLVLGQEYEGL-PDAARDPNDLRVKIDG 319 + AG+ VV + + PA + +V+G E G+ P A+ + L KI Sbjct: 185 VTALSDAGWWVVGMDGNTEIDIAQAFDTPAPLAIVMGAEGSGIRPLIAKGCSQL-AKISI 243 Query: 320 TGNVAGLNISVATGVLLGEWWRQNK 344 + + LN+S A + L E RQNK Sbjct: 244 SPQMESLNVSSAASIALYEANRQNK 268 >UniRef50_B2IBT9 tRNA/rRNA methyltransferase (SpoU) n=19 Tax=Alphaproteobacteria RepID=B2IBT9_BEII9 Length = 179 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 7/148 (4%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNI 258 +LAL P N G M+R CA GV+ +++ A S R A G +++ + Sbjct: 20 MLALYQPDIPQNCGTMLRLCACLGVEAAIIEPAGFPVSDRHFRRA--GMDYLDQVALSRH 77 Query: 259 VNVLDDFR----QAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 V+ FR + G +V S++ +P + +L++G+E G+P+A D R Sbjct: 78 VS-FTAFRAWQIETGRRLVLLSTKASQPYTDFTFRPDDILLMGRESAGVPEAVHASADAR 136 Query: 315 VKIDGTGNVAGLNISVATGVLLGEWWRQ 342 V I + LN++VA ++LGE RQ Sbjct: 137 VVIPLRPPMRSLNVAVAAAMVLGEALRQ 164 >UniRef50_A9AZL1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZL1_HERA2 Length = 266 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 10/150 (6%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNI 258 +AL NP NLG +MR+C G +G++ + D AAIR + G ++ + Sbjct: 120 VALNGVGNPGNLGAIMRTCDAVGCEGLILIGDTTDPYHPAAIRASMGSLFALRMVR---- 175 Query: 259 VNVLDDF----RQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 D+F + GY V+ T+ + + S P+ +L++G E GL + D Sbjct: 176 -TTFDEFAAWKQTNGYHVIGTTPDVEQEYQTISYPSPAILLMGSERLGLSVGEQSVCDTL 234 Query: 315 VKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 V+I G LN+ VAT ++L E +RQ + Sbjct: 235 VRIPMAGTCDSLNLGVATSIVLYEMFRQQR 264 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 6/191 (3%) Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGG 213 + V+ + + +AS T G+ ++K+ T +G +L LE+ +P NLG Sbjct: 74 FEVLSDQVMKEASETITPQGILAIVKQPIYTLKDM---TSGDSIRLLLLEDIRDPGNLGT 130 Query: 214 MMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 M+R+ G+ G+V+ +D+ + + IR+ G V ++ L+ + Sbjct: 131 MVRTAEGVGMTGIVLSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDFYACLNQIKNEE-IA 189 Query: 273 VTTSSEQGKPLF-KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 + + QG + K S K +++G E GL D A + R+KI GNV LN ++A Sbjct: 190 IYAAHLQGAVWYDKVSYQGKSAILIGNEANGLSDKATSLSTQRIKIPMEGNVESLNAAIA 249 Query: 332 TGVLLGEWWRQ 342 VL+ E +RQ Sbjct: 250 AAVLMYESYRQ 260 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 5/188 (2%) Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 +V E + S T+ G+ +IKK N + + +++ + V+ L+ +P N G ++ Sbjct: 79 LVPEKIFREVSDTQTPQGILAVIKK-NKYSFDKVITEGSS---VVILDCLQDPGNAGTII 134 Query: 216 RSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ G+ V++ + L S +R+ G H+ G NI ++ +Q Y V+ Sbjct: 135 RTADAAGISAVLMSKGCVDLYSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDYKVIA 194 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + F+ L + +++G E G+ D D VKI G LN SVA V Sbjct: 195 SHLSGKNNYFQEDLTGRSAIIVGNEANGISDETAYMADSLVKIPMPGKAESLNASVAASV 254 Query: 335 LLGEWWRQ 342 ++ E RQ Sbjct: 255 MIYEIVRQ 262 >UniRef50_A2U211 SpoU rRNA methylase family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U211_9FLAO Length = 229 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 16/170 (9%) Query: 176 FLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE 235 FL KR T Q V + + LE+ PHN ++R+C FG VQD ++E Sbjct: 17 FLTDKRKQTF--QKVLAERTRHFTVVLEDIYQPHNASAVVRTCDIFG-----VQDLHVIE 69 Query: 236 SGAAIRTAEGGAEHVQP-IT-------GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK-T 286 + R ++ + Q IT GDN L+ + AGY ++ TS L + Sbjct: 70 NRYINRVSKYVTKGAQKWITTKRYKTDGDNTKTCLNHLKTAGYQIIATSPHADANLLQDF 129 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + K V G E G+ D ++ D +KI G NISVA ++L Sbjct: 130 KIDKKTAFVFGAEATGISDTVKEHADGFLKIPMVGFTESFNISVAAAIIL 179 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 76/143 (53%), Gaps = 3/143 (2%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNI 258 + L+ +P N+G ++R+ FG V++ D A + + +R+ +G H+ I+ + Sbjct: 102 VVLDGVQDPGNVGTIIRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHI-AISRTEL 160 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + L++ ++ G TV+ T+ + +PL + + + +VLG E +G+ A D D R I+ Sbjct: 161 IPALNELKELGVTVIGTALQGAQPLSELPVSENIAVVLGNEGQGIRPATLDICDQRALIE 220 Query: 319 GTGNVAGLNISVATGVLLGEWWR 341 + LN++VA G+ L + R Sbjct: 221 -MSSFESLNVAVAAGICLYRYRR 242 >UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39 Tax=Alphaproteobacteria RepID=A9M5R9_BRUC2 Length = 286 Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%) Query: 156 VVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 +VD ++ K +G+E H GV +I+ T + +S+ +L L+ ++PHN+G + Sbjct: 98 IVDPRDIDKETGSEAVHQGV--MIEAEPLRT--RKLSELRESPLLLVLDQVTDPHNVGAI 153 Query: 215 MRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 MRS FG ++ + E+G + A G E + I N+ +++ G+ + Sbjct: 154 MRSAVAFGAGALITTSRHSPQETGVLAKAASGALELIAHIEVRNLAEAIEELHTLGFQTI 213 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 S+ + T ++ LVLG E +GL R+ ++D G + LN+S A Sbjct: 214 GLDSQGPLEMEATLSGNRIALVLGAEGKGLRQKTRETVTALARLDMPGEIKSLNVSNAAA 273 Query: 334 VLL 336 + L Sbjct: 274 ISL 276 >UniRef50_D0MER6 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Rhodothermaceae RepID=D0MER6_RHOM4 Length = 257 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 14/189 (7%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC--VLALENESNPHNLGGM 214 V E E+ + S E GV + + QW +A C +LAL+ +P N G + Sbjct: 72 VSEQEMARLSEVETSQGVLAVAR-------MQWQPEAHLLRCRRILALDGLQDPGNAGTI 124 Query: 215 MRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ A FG++ VV + L + +R A G + + + ++L + G+T Sbjct: 125 LRAAAWFGIEAVVAGAGTVDLYNPKVVRAAMGSHWDLALVRTGALPDLLAQLQANGFTCY 184 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN---VAGLNISV 330 E G P + VLVLG E GL A R+ RV + G+ LN+++ Sbjct: 185 GADLE-GTPASRWQPREPAVLVLGSEAHGLQPAVRERLTARVTVPGSPRRQATESLNVAM 243 Query: 331 ATGVLLGEW 339 A VLL EW Sbjct: 244 AATVLLYEW 252 >UniRef50_P47494 Uncharacterized tRNA/rRNA methyltransferase MG252 n=3 Tax=Mycoplasma RepID=Y252_MYCGE Length = 242 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 5/157 (3%) Query: 188 QWVSQAGAQDC--VLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAE 244 Q V + C ++ L+ +P+N G ++R+C V G++ + + + + ++T+ Sbjct: 84 QLVKVVENKKCSTLVMLDEIQDPYNFGAILRTCLASEVDGIIFKKNNQVPINNTVMKTSM 143 Query: 245 GGAEHVQPITGDNIVNVLDDFRQAGY-TVVTTSSEQGKPL-FKTSLPAKMVLVLGQEYEG 302 G + + N+ + ++ G+ TVV+T KP+ ++ AK +L++G E G Sbjct: 144 GSVFYQNLVQVANLSYTITKLKEIGFWTVVSTLDPIWKPIDYRKVDFAKKILIVGNEDRG 203 Query: 303 LPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + D R+KI + LN+SVA G++L W Sbjct: 204 VNQLITKNADCRIKIPMNNKINSLNVSVALGIILFAW 240 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 2/154 (1%) Query: 190 VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAE 248 +++ A +L L+ ++PHNLG ++R+ V GV++ + ++ + +T+ G E Sbjct: 103 IAEQEANPLILILDGLTDPHNLGSILRTADATNVCGVIIPKHRSVGVTPVVSKTSTGAVE 162 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 H+ N+ LD + G+ + T G P + K+ LV+G E +G+ + Sbjct: 163 HIPIARVTNLSQTLDKLKARGFWIFGTDM-NGTPSDCWNTNGKLALVIGNEGKGISTNIK 221 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 D + I G+V LN SVA +L+ E +R Sbjct: 222 KQVDEMITIPMNGHVQSLNASVAAAILMYEVFRN 255 >UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1I377_VITVI Length = 569 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 10/145 (6%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDN 257 +AL+ ++P NLG ++RS FGV GVV+ +++A L SG + + G E ++ N Sbjct: 404 VALDEVTDPQNLGAIIRSAYFFGVSGVVLCAKNSAPL-SGVVSKASAGSLELMELRFCKN 462 Query: 258 IVNVLDDFRQAGYTVVTTS-SEQGKPLFKTSLPAKMVLVLGQEYEGL-PDAARDPNDLRV 315 ++ L + G+ V+ S S + PL + S A +LVLG E GL P R L + Sbjct: 463 MMQFLTSSAENGWQVLGGSVSPRAIPLNEISPGAPTILVLGSEGTGLRPLVERSCTQL-I 521 Query: 316 KIDGT----GNVAGLNISVATGVLL 336 +I G V LN+SVA GVLL Sbjct: 522 RIPGNIPSFLAVESLNVSVAAGVLL 546 >UniRef50_B6KS19 RNA methyltransferase, TrmH family domain-containing protein n=3 Tax=Toxoplasma gondii RepID=B6KS19_TOXGO Length = 2899 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 9/167 (5%) Query: 182 NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIR 241 G T+Q+ + Q G D V+ NL G+ R+C F K +V+ + +L S Sbjct: 2733 EGETLQRELRQRG--DLVVVASLIDKVPNLAGLARTCEVFDAKKLVIHNLDIL-SDPQFN 2789 Query: 242 TAEGGAEH----VQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS-LPAKMVLVL 296 T G + H ++ ++ D++ L D + GYTVV + + + K LVL Sbjct: 2790 TI-GVSAHRWLPIEQVSADDVARYLLDLKTQGYTVVGVEQTGSSQMLENARFDRKTALVL 2848 Query: 297 GQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 G E EGLP A D ++I G + LN+ V +++ E+ +Q+ Sbjct: 2849 GAEKEGLPAALLALMDACIEIPQLGLIRSLNVHVTAAMVVWEYTKQH 2895 >UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax=Orientia tsutsugamushi RepID=B3CT02_ORITI Length = 266 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 67/133 (50%), Gaps = 1/133 (0%) Query: 210 NLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA 268 NLG ++RS A F + +++ ++ ++ E+G + A G E + + N+ N ++ ++ Sbjct: 128 NLGAIIRSAAAFNISTIILPENNSIEENGTIAKIAVGALEKINLVKVKNLYNTINYLKKY 187 Query: 269 GYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 G+ ++ L + + +KM VLG E +GL + R D +KI + LN+ Sbjct: 188 GFWIIGLDLNNSNQLTEQTFHSKMAFVLGSENKGLRNLTRQQCDFLIKIPMSHKTESLNV 247 Query: 329 SVATGVLLGEWWR 341 + A ++ E ++ Sbjct: 248 AGAATIIFYESFK 260 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 5/155 (3%) Query: 192 QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA---AIRTAEGGAE 248 QA ++ L+ + NLG ++R G G+V+ + +SG A R++ G Sbjct: 116 QAQLPALLVILDGIQDSFNLGAIIRCAEALGAGGIVLPEKG--QSGVNSQAARSSAGAVN 173 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 + + +D + G ++ + + + L+ +PA + L++G E +G+ A Sbjct: 174 FLPIYRVPALDRAIDQLKSRGMKILAATEKSEQSLWNVVIPAPLCLIIGNEGKGVSSALL 233 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D++V+I G + LN +VA G+LL E RQ+ Sbjct: 234 SACDIQVRIPMAGQTSSLNAAVAAGILLAEIQRQS 268 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 4/191 (2%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL-ENESNPHNLGGMM 215 +D+A L K + + +H GV T +++AG + L L ++ +PHNLG ++ Sbjct: 54 LDKAALDKRATSRNHQGVMAETPPFRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALI 113 Query: 216 RSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGD-NIVNVLDDFRQAGYTVVT 274 R+ G G+++ + + A GA P+ N+ LD+ + AG V Sbjct: 114 RTAYAAGCDGIIIPERRAAQMTPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYG 173 Query: 275 TSSEQGKPLFKT-SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 + G+ ++ T VLV+G E EGL ++ D V++ G VA LN SVA Sbjct: 174 ADMD-GESVYTTGDYQGGTVLVIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGA 232 Query: 334 VLLGEWWRQNK 344 +L+ E +RQ + Sbjct: 233 LLMYEVYRQRE 243 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 4/172 (2%) Query: 177 LIKKRNGTTVQQWVSQAG-AQDC--VLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-A 232 +I + N V VS + A C ++ L++ ++ NLG + RS G G+++ + + Sbjct: 85 IIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDAGNLGAIARSAESVGAAGIIIPNKRS 144 Query: 233 LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKM 292 + + +++ G H+ N+ L + GY V S + ++ +L + Sbjct: 145 AYVTASTYKSSAGAISHIPVAQVANLQQALARLKNEGYWVAGASEKAEGGIWDANLTGNV 204 Query: 293 VLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 LV+G E GL ++ D V + G V+ LN++ + V + EW RQN+ Sbjct: 205 CLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLNVAQSATVCMYEWLRQNR 256 >UniRef50_A4RE91 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RE91_MAGGR Length = 616 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 17/162 (10%) Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPI 253 Q VL L+ +P NLG ++R+ + GV VV+ +++A L + A++ A G +E + Sbjct: 433 QPLVLLLDRILDPGNLGNILRTASFLGVSAVVISQRNSATL-TPVALKAAAGASETLPLF 491 Query: 254 TGDNIVNVLDDFRQAG---YTVVTTS-----SEQGKPLFKTSLPAKM---VLVLGQEYEG 302 DN + L + +++G Y V S SEQ + P VLV+G E EG Sbjct: 492 ACDNPASFLHNSKESGWKIYAAVAPSRSRKKSEQDVYDIEDLDPLATDPCVLVVGSEGEG 551 Query: 303 LPDAARDPNDLRVKI---DGTGNVAGLNISVATGVLLGEWWR 341 LP + + V I G + LN+SVA G+L G + R Sbjct: 552 LPTMIKTKSHHAVTIPNSSGAHTIDSLNVSVAAGLLCGAFLR 593 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 6/157 (3%) Query: 191 SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGA 247 S+ + ++ L+ +PHNLG ++R+C FG GV++ + A + E+ + +++ G Sbjct: 96 SKKSLKPLLVILDGLEDPHNLGAIIRNCVAFGADGVIIPKWRAAGVNETVS--KSSAGAV 153 Query: 248 EHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAA 307 EH+ +N + ++ + +V + G+ L K LP + +++G E GL Sbjct: 154 EHISISRVENTNQAIGLLKENSFWIV-GAENGGRILEKIDLPFPLAVIIGSEGFGLHSLT 212 Query: 308 RDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + +D + I ++ LN S A+ V+L E ++ K Sbjct: 213 KKNSDFLISIPQENIISSLNASCASAVILYEIAKKRK 249 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 5/146 (3%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGD 256 + L+ +PHNLG +MR+ G G+++ + L ++ A + + G E+V + Sbjct: 102 IILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVA--KASTGAMEYVPVVRVT 159 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N+V +++ ++ G + T ++ + + +V+G E G+ R+ D V Sbjct: 160 NMVRTMEELQKRGLWIFGTDAKGSSDYRTMDVDMPLAIVIGSEGFGMSCLVREKCDFLVH 219 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQ 342 + G V LN SVA +LL E +R+ Sbjct: 220 LPMRGKVTSLNASVAASLLLYEVYRK 245 >UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_LEPBJ Length = 277 Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 2/145 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDN 257 +L +E P NLG ++R+ G V+V D L L + IR + G + G+ Sbjct: 130 ILVIEGVEKPGNLGTILRTAEGAGFHTVIVSDPKLDLFNPNVIRASTGALFTLDVYLGE- 188 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 I + ++ Y + + E K F L K+ LV G E GL AR+ +D + + Sbjct: 189 IETIYGILKKNHYRTLAVTPEAKKFYFDADLKGKIALVFGSEQYGLSSYARNHSDEYLSL 248 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 G LN++++ G+L+ E RQ Sbjct: 249 PMLGEADSLNLAMSAGILMYEVIRQ 273 >UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYS7_HYPNA Length = 269 Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 + L+ S+PHNLG + RS A FG +G+V+Q A +G ++A G E V I N Sbjct: 119 IAVLDQVSDPHNLGAIFRSAAAFGFEGLVLQTRNAPPITGIVAKSAAGAIETVTEIRAVN 178 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGL-PDAARDPNDLRV 315 I L+ +A + V + E + L + AK+ +VLG E GL P A+ ++L Sbjct: 179 IARALEQLAEADFHTVGLAGESTRSLDEAVKGAAKVAIVLGAEGSGLRPAVAKACSEL-A 237 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWR 341 +I + LN+S A + E R Sbjct: 238 RIPIAAQMESLNVSNAAAIAFYEASR 263 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 5/190 (2%) Query: 157 VDEAELTKASGTEHHGGVCFL--IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 V A+L K H G V L + + + Q + G ++ L+ ++ NLG + Sbjct: 54 VPVAKLNKLVPLNHQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAI 113 Query: 215 MRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 +R+ G +V+ Q +A L SGA ++T+ G H+ N+ ++ + +G V Sbjct: 114 VRTAVCVGAHALVLPKQGSASLGSGA-MKTSAGALAHLPICREANLQASINYLQNSGLQV 172 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + + +++ L ++LG E +G+ + D++ I G ++ LN+SVA Sbjct: 173 IACHEKTQTSIYQVKLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAA 232 Query: 333 GVLLGEWWRQ 342 ++L E +RQ Sbjct: 233 AIILYESFRQ 242 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 8/246 (3%) Query: 101 RRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA 160 RR+ E + G N+ + +S V+ FI+S + A R ++ Sbjct: 39 RRKEEETCFIGGRNS---VLESLRAGQVKKVFIKSGKKDGRLLALAEEAERLGVAAIETE 95 Query: 161 ELTKASGTE--HHGGVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNLGGMMRS 217 E T TE H GV +K +++ +S +D ++ L+ + N+G ++R+ Sbjct: 96 ERTLDRLTEGVRHQGVAASLKPYAYADLEEVLSSCERKDPLLILLDGVEDVRNIGAIVRT 155 Query: 218 CAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 G V++ + + + AA++TA G ++ NI L+ ++ G+ V Sbjct: 156 AECAGAAAVLLPKHRSSPVTAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGAD 215 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + G L++ L +V+V+G E +G+ + D V+I G V+ LN+SVA +L+ Sbjct: 216 MDGGD-LYQADLKGPLVIVMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLM 274 Query: 337 GEWWRQ 342 E RQ Sbjct: 275 YEAVRQ 280 >UniRef50_A9T6G4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6G4_PHYPA Length = 280 Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 9/142 (6%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDN 257 +AL+ +P N G ++RSC + G GVVV +++A L SG + + G E ++ + N Sbjct: 125 VALDEVIDPQNFGAILRSCHYLGATGVVVCAKNSAPL-SGVVSKASAGALEVMEIQSCRN 183 Query: 258 IVNVLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGL-PDAARDPNDL-R 314 ++ LD Q G+ V SSE + P+ + +LVLG E GL + R +L Sbjct: 184 MMKFLDTSVQNGWRAVGASSEPRALPIQELEPGLPTILVLGNEGRGLRTNVKRSCTELVS 243 Query: 315 VKIDGTGNVAGLNISVATGVLL 336 +K D V LN+SVA G+LL Sbjct: 244 IKADA---VDSLNVSVAAGILL 262 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 10/152 (6%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAA-----IRTAEGGAEHVQPI 253 VL L+ ++PHN+G ++RS F V V++ GA R + G V + Sbjct: 133 VLVLDAITDPHNVGAIVRSADQFSVDAVLLPH----HHGAGGTETITRVSAGAVAWVPLV 188 Query: 254 TGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDL 313 N+V +++G+ + + G+ + + P K LVLG E G+ R D Sbjct: 189 RVRNLVRTAGILKRSGFWLYG-ADVAGEAIGARTFPPKTALVLGNEGHGVSPLLRTHCDA 247 Query: 314 RVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 + I GNV LN+SVA G+LL E R ++ Sbjct: 248 LISIPTQGNVDSLNVSVAAGILLYEIRRSQQS 279 >UniRef50_Q1N3Z0 Putative tRNA/rRNA methyltransferase n=1 Tax=Bermanella marisrubri RepID=Q1N3Z0_9GAMM Length = 229 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 8/152 (5%) Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPI 253 D L + PHNL ++RSC F V + V D G A+ G ++V Sbjct: 19 DLTLITDAVFKPHNLSAIIRSCDAFAVNELNVVWPYDDYQTFRGRAM----GSQQYVNVK 74 Query: 254 TGDNIVNVLDDFRQAGYTVVTTS-SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 T ++ + F+Q GY +V +Q P + +V+G E G+ A D D Sbjct: 75 THKDVSQAIQGFKQQGYQIVAAHFCDQAVPHYDIDYTKPTAIVMGAEKNGVSAKAMDLVD 134 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + + G V LN+SVA ++L E Q K Sbjct: 135 HSIIVPMEGMVQSLNVSVAAALILSEAMHQRK 166 >UniRef50_C0EHG6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EHG6_9CLOT Length = 259 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 3/214 (1%) Query: 129 RAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQ 188 + ++ ++ L M A + + K S + GV + KK + T Sbjct: 49 KILITENCLQKYNHELAEMLAINGKMNTISGELAGKLSDVKSPQGVFAIAKKLDKTLDTD 108 Query: 189 WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAE 248 + G C LAL + +P N+G M+R+ G+ GV++ + + S +R+ G Sbjct: 109 TIKSGG---CYLALCSTQDPGNIGTMIRTADALGIDGVLLHNTCDIYSPKVVRSTMGSLF 165 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 ++ +++ + G E P+ + S VL +G E GLPD+ Sbjct: 166 RMRFALCPDLLGLTASLNACGVDTCAAVVEDALPVTRASFSGPRVLYIGNEGNGLPDSIA 225 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 R+ I GN LN + A +L+ E ++ Sbjct: 226 FACARRITIPMRGNAESLNAASAAAILMWEMTKE 259 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 4/156 (2%) Query: 193 AGAQDCV--LALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEH 249 AG+ D L L+ +P N+G + RS G+ GV++ + + +R+ G Sbjct: 114 AGSTDTATYLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTMGAIFR 173 Query: 250 VQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARD 309 V + D+++ +D ++ G ++ + G+ L+ T P K+ ++G E GL A D Sbjct: 174 VPFVQSDDLIYTIDALKRKG-VLIYGAHLDGEELYDTEFPDKIAFLIGNEGNGLSKAVSD 232 Query: 310 PNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 D ++I G V LN +++ +L E RQ ++ Sbjct: 233 TADRLLRIPMEGKVESLNAAISATLLSYEAMRQRRS 268 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 1/188 (0%) Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 + + ELT+ H G+ + T+++ + Q L L+ +P N G ++ Sbjct: 70 ISTDKELTQKCRASDHQGMIAKMAPFPYTSIELFNQQEITSPLFLILDRIQDPFNFGAII 129 Query: 216 RSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 RS G G+ E + + RT+ G HV + ++V++ D++Q G +V Sbjct: 130 RSAEIMGADGIFSGTHEQCEVTSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNGINIVG 189 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 T+ + + L + +++G E G+ + V+I G LN++V+ + Sbjct: 190 TAMQASEKLNDYNFQQPTAVIVGNEGTGISPELQAECTHLVRIPQQGKTESLNVAVSASI 249 Query: 335 LLGEWWRQ 342 LL E RQ Sbjct: 250 LLYEASRQ 257 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 15/195 (7%) Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD-----CVLALENESNPHN 210 V+ +EL + G+ +H GV T+ +V A D VL L++ +P N Sbjct: 60 VIPRSELDRMVGSVNHQGVVL------ETSPYPYVDFATLLDPAPESIVLLLDHLQDPQN 113 Query: 211 LGGMMRSCAHFGVKGVVVQD--AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA 268 + ++R+ GV+GVV+ + AA + + A + + G EH+Q N+ +D R+ Sbjct: 114 IATLLRTAEAAGVRGVVLPERRAAGI-TPAVVNASAGAVEHLQITLVTNLARAVDTLREH 172 Query: 269 GYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLN 327 GY +V + LF+ LP +VL++G E GL D++V I G + LN Sbjct: 173 GYWIVALEPGPNAQSLFRAPLPLPLVLLVGAEGHGLSPVLLKRADVQVIIPMLGQIESLN 232 Query: 328 ISVATGVLLGEWWRQ 342 +VA + L E R+ Sbjct: 233 AAVAGSIALYEIVRR 247 >UniRef50_Q7BKE9 Predicted rRNA methylase n=4 Tax=Bacteria RepID=Q7BKE9_PRB01 Length = 240 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 4/164 (2%) Query: 182 NGTTVQQWVSQAGAQD-CVLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGA 238 N ++ ++ AQ+ +L L+N +P NLG +RS A GV +++ A + S A Sbjct: 75 NFKDLKLFLDSDKAQNPLILILDNIIDPRNLGACIRSAAVIGVDAMIINKHHCAPINSIA 134 Query: 239 AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQ 298 + + GGAE ++ N+VN L + + S K + +++G Sbjct: 135 H-KVSVGGAEVIKIFHVTNLVNCLKYLQGININIYGLSEHASKSHTDYNFTEASAIIMGA 193 Query: 299 EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 E G+ + + D ++ + N+SVATG++L E RQ Sbjct: 194 EESGVREKTLERCDHKINLSSNKLFKSFNVSVATGIILSEASRQ 237 >UniRef50_B0S1P7 23S rRNA methyltransferase n=2 Tax=Finegoldia magna RepID=B0S1P7_FINM2 Length = 256 Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 5/152 (3%) Query: 186 VQQWVSQAGAQ-DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTA 243 V ++ Q + D +L LEN ++P NLG ++RS FG +V+ + + + + IR+A Sbjct: 97 VVSFIEQKDVKSDQILFLENINDPGNLGTIIRSAEAFGYNKIVLSNNSCDIYNSKTIRSA 156 Query: 244 EGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG-KPLFKTSLPAKMVLVLGQEYEG 302 G + I+ +NI NVL+ ++ G+ + TS E+ + + + K VL++G E G Sbjct: 157 MGSLFRMN-ISYENI-NVLEKYKSKGFKIYETSLEKNSRSILEIKNKEKHVLIIGNEANG 214 Query: 303 LPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + D + D + I LN S+A + Sbjct: 215 ISDEIKKYADEFLIIPMDNVTESLNASIAASL 246 >UniRef50_C5PIG5 RNA methyltransferase, TrmH family, group 3 containing protein n=2 Tax=Coccidioides RepID=C5PIG5_COCP7 Length = 495 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 21/162 (12%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDN 257 L L+ +PHNLG ++RS +FG V +++A L S ++++ G AEH+ I+ + Sbjct: 285 LLLDGIVDPHNLGAILRSAYYFGADAVAFSSRNSAPL-SPVVMKSSSGAAEHIPLISIHD 343 Query: 258 IVNVLDDFRQAGYTV--------VTTSSEQGKPLFKTSLPAKM-----VLVLGQEYEGLP 304 V+ +D R+ G+ V S+ + +LP ++ VL+LG E +GL Sbjct: 344 TVSFIDASRRNGWRFFAAEPPASVAPDSKNKNIVSSKNLPNELQNYPCVLMLGNEGDGLS 403 Query: 305 DAARDPNDLRVKIDG-----TGNVAGLNISVATGVLLGEWWR 341 + D V +D V LN++VA+G+L + R Sbjct: 404 KELKSKADASVVVDCPRKHIVDEVDSLNVAVASGILCEAFMR 445 >UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA Length = 260 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%) Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPIT 254 Q V+ L+ +P N GG++RSC V GV+ +D + + I+T+ G ++ I Sbjct: 109 QGIVVVLDQIHDPGNFGGILRSCLAANVLGVIFKKDNQVSINNTVIKTSLGACFYLNLIE 168 Query: 255 GDNIVNVLDDFRQ--AGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 N+ + D ++ ++ V+ S+Q + + K +L++G E +G+ D Sbjct: 169 VANLSYAIKDLQEKYGFWSYVSNLSDQAQD-YNVDYANKSILIVGNEQKGVSSQLIKNAD 227 Query: 313 LRVKID-GTGNVAGLNISVATGVLL 336 ++KI T + LN+SVATG++L Sbjct: 228 YQIKIPMYTDKIQSLNVSVATGIML 252 >UniRef50_Q3ABT2 RNA methyltransferase, TrmH family protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABT2_CARHZ Length = 258 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 64/147 (43%) Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQP 252 AG L L+ +P N+G ++R+ FGV GV++ A+ + A G P Sbjct: 105 AGKDGAFLVLDGLQDPGNVGTLLRAAFGFGVSGVILLPPAVDIYNPKVIRASAGTAFKFP 164 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 + + D + + SE G PL PAK + +G E +G+ + Sbjct: 165 VLRMEADELKDIILKNNIPLFLAESEGGIPLTAIDFPAKFFVAVGNEGQGISTTLKSLPH 224 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEW 339 ++ I G + LN ++A G+++ EW Sbjct: 225 QKISIPMPGKIESLNAALAGGIIIYEW 251 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 2/139 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 VL ++ +P NLG M+R+ G+ VV+ D A +G +R+A+G H+ P+ N Sbjct: 106 VLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTLRSAQGSHFHI-PVVRRN 164 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + + +D+ + G V T+ + G P + L++G E G+ A + DL + + Sbjct: 165 LPSYVDELKAEGVKVYGTALQNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYV 224 Query: 318 DGTGNVAGLNISVATGVLL 336 G LN++VA +L+ Sbjct: 225 PLYGQAESLNVAVAAAILV 243 >UniRef50_B0T2B4 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Caulobacteraceae RepID=B0T2B4_CAUSK Length = 278 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 3/169 (1%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD 230 H GV I + +V + A Q ++ L+ ++P N+G + RS A FG +GV++QD Sbjct: 100 HQGVALKIDEPEALSVYDLGTPA--QGLLVMLDQITDPQNIGAIFRSAAAFGARGVILQD 157 Query: 231 -AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 A +G +TA G + + N+ L++ G+ V + E + L + Sbjct: 158 RHAPALTGVLAKTAVGAVDKIAYARVVNLSRALEELADLGWRAVALAGEAQQTLDQVLDG 217 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 VLVLG E EG+ + D KI G LN+S A V L E Sbjct: 218 RPTVLVLGSEGEGVRRLVSEHCDAMGKIAMPGGFESLNVSAAAAVALYE 266 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 1/144 (0%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNI 258 L L+ S+ N G ++R+ GV G+++Q + + + I+T+ G A + D+I Sbjct: 100 LILDQLSDVRNFGAIIRTAECTGVNGIIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHI 159 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + L + + V + + ++ + + +++G E+ G+ + D + K+ Sbjct: 160 KDALFILQASNIKTVAATEKTDSSIYDVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKLP 219 Query: 319 GTGNVAGLNISVATGVLLGEWWRQ 342 +GN+ LN+SVA GV L E RQ Sbjct: 220 LSGNIESLNVSVACGVFLYETVRQ 243 >UniRef50_Q1UZI1 SpoU rRNA Methylase family protein n=3 Tax=Candidatus Pelagibacter RepID=Q1UZI1_PELUB Length = 247 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 38/167 (22%), Positives = 78/167 (46%), Gaps = 2/167 (1%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD 230 HGG ++ + +++++ + + + ++ ++P N+G ++RS + F + G++V++ Sbjct: 72 HGGYIAEVEHIDQPDLKEFI-KGKNELTFVCIDEVTDPRNIGSLIRSASSFHIDGLIVKE 130 Query: 231 AAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 +S + A G EH+ NI + L + R+ + V + K + Sbjct: 131 RQFPSDSKLMYKAASGCMEHINIFEVSNINSTLKNLREKNFWVYGFDARGEKDFTEIKWE 190 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 K VL+ G E G+ + D VKID +V LNIS + ++ Sbjct: 191 GKNVLLFGSEGFGMREHTGKYTDFFVKIDINKDVESLNISNSAAIVF 237 >UniRef50_Q7NN60 Gll0554 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NN60_GLOVI Length = 265 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 6/193 (3%) Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL-ENESNPHNLG 212 Y V A + + T H GV +++R W +L L E +P N+G Sbjct: 73 YETVAPAVIEALADTVHPSGVVAAVRRR----ADAWRPLLERDVSLLVLGERLQDPGNVG 128 Query: 213 GMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYT 271 ++RSCA G G+V+ D+ + +R + G P++ ++ + D + G Sbjct: 129 TLVRSCAAVGADGLVLSADSVDPDHPKVLRASAGLWFRSPPLSVPDLTACVADLVRRGVQ 188 Query: 272 VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 V+ + G+ L++ L VLG E +GL + R RV I V LN++V+ Sbjct: 189 VLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGVESLNVAVS 248 Query: 332 TGVLLGEWWRQNK 344 +LL E RQ + Sbjct: 249 GALLLFEAARQRR 261 >UniRef50_Q13395 Probable methyltransferase TARBP1 n=18 Tax=Metazoa RepID=TARB1_HUMAN Length = 1621 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 5/140 (3%) Query: 208 PHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPIT---GDNIVNVLDD 264 P NLGG+ R+C FG +VV + S + AE P+ +++ L Sbjct: 1474 PTNLGGLCRTCEVFGASVLVVGSLQCI-SDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQ 1532 Query: 265 FRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 + GYT++ + + L + P K +L+LG E EG+P D+ V+I G + Sbjct: 1533 KKTEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGII 1592 Query: 324 AGLNISVATGVLLGEWWRQN 343 LN+ V+ +L+ E+ RQ Sbjct: 1593 RSLNVHVSGALLIWEYTRQQ 1612 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 4/189 (2%) Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 V D + + SG+ H GVC + V + + A ++AL+ +P NLG + Sbjct: 68 VADGGWIERRSGSPDHQGVCAQVAPFRYAYVDELL--AVEHPLIVALDEIQDPQNLGAIA 125 Query: 216 RSCAHFGVKGVVVQDAALLESGAAIRTAEGGA-EHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ G G+V+ + A+ A GA EH+ N+ + L D R G V Sbjct: 126 RTAECAGATGLVIPARRSADVTPAVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYG 185 Query: 275 TSSEQGKPLFKTSLPAK-MVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 + G P +VLVLG E GL D + + G + LN+S A Sbjct: 186 AEGDGGVPYTGVDYSGPGVVLVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAAS 245 Query: 334 VLLGEWWRQ 342 LL E RQ Sbjct: 246 ALLYEIVRQ 254 >UniRef50_Q7MW92 RNA methyltransferase, TrmH family n=2 Tax=Porphyromonas gingivalis RepID=Q7MW92_PORGI Length = 254 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 26/221 (11%) Query: 147 MAANRKAYHVVDEAELTKASGTEHHGGVC-----FLIKKRNGTTVQQWV---------SQ 192 M + +V A + +A T H V F K+ + T Q + + Sbjct: 36 MLPFYRCRMLVGTAAMLRAVSTPHDAEVVELPESFDFKRISTQTTPQPLMAVFDLPAEPE 95 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQ 251 + L L+ +P N+G ++R+ FG++ V + +A + S ++ + G VQ Sbjct: 96 PVVEGLTLLLDGVQDPGNVGTILRTADWFGIRHVWLGTGSADVFSPKVVQASMGALARVQ 155 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP---AKMVLVLGQEYEGL-PDAA 307 P N V+ L FR+ G V + G+ L++ LP +LVLG E G+ P+ A Sbjct: 156 PTPLKNTVDTLAYFRRQGIPVYGAFLD-GQSLYEAPLPNFTEPAILVLGSEGRGISPEVA 214 Query: 308 RDPNDLRVKIDGTG-----NVAGLNISVATGVLLGEWWRQN 343 + D R+ I +G + LN+++AT +L EW R++ Sbjct: 215 AEITD-RLTIPASGLSVKGHTESLNVAIATAILCSEWRRRS 254 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 26/271 (9%) Query: 92 KSFIDPEVLRRQRAEET------RVYGENAC-QALFQSRPEAIVRAWFIQSVTPRFKEAL 144 ++F DP + R+R ++ V G NA +AL P + R +E + Sbjct: 46 RTFADPRLAARRRVDKLGSDSDELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIV 105 Query: 145 RWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA----------- 193 + D E+ + + + +H G+ ++ ++Q+ V +A Sbjct: 106 KLAGMQGLRLLEADRLEMDRIAHSTNHQGIIVKVQPYQYHSLQELVERAEKKARAMEAAD 165 Query: 194 ------GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGG 246 A+ +AL+ ++P NLG ++RS A FG GV++ + + + AA + + G Sbjct: 166 SDSARINARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGA 225 Query: 247 AEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAK-MVLVLGQEYEGLPD 305 A H+ N+ + R+ G+ + K + +T +V+VLG E +G+ Sbjct: 226 AAHLPVARVVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSR 285 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 R+ D I + V LN SVA G+ L Sbjct: 286 LTREACDAIAGIPISSAVESLNASVAAGISL 316 >UniRef50_B4SF96 tRNA/rRNA methyltransferase (SpoU) n=5 Tax=Chlorobiaceae RepID=B4SF96_PELPB Length = 269 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 7/186 (3%) Query: 157 VDEAELTKASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 + E E + S T G+ + ++ R + VS + ++AL++ +P N+G ++ Sbjct: 79 IGEKECAQLSETATSQGIFGVFRQQRPVEPAAEAVSATSDKSLIVALDDVQDPGNVGTIL 138 Query: 216 RSCAHFGVKGVVVQDAALLESGA-AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ FG ++ A A+R+ G ++ D + L F++ GY++ T Sbjct: 139 RTAVWFGADALICSTGTADRYNAKAVRSCAGSIYAIRHYGVDRLERELLWFKKQGYSI-T 197 Query: 275 TSSEQGKPLFK-TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG---NVAGLNISV 330 +SS +GK + +S PAK VLV+G E G+ + + D V+I +G V LN +V Sbjct: 198 SSSLEGKDFREFSSWPAKQVLVIGNEANGISEPVKALADRLVRIPHSGRSVRVESLNAAV 257 Query: 331 ATGVLL 336 + +L+ Sbjct: 258 SAAILM 263 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 3/176 (1%) Query: 170 HHGGVCFL--IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H G V F+ + + + ++ + G + L+ ++ N G + R+C G ++ Sbjct: 68 HQGVVAFISSVTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCECAGADAII 127 Query: 228 VQDAALLESGAAIRTAEGGAEHVQPITGD-NIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + A GA H P+ + N+ N + + G+ +V + + K Sbjct: 128 IPSKNSVSVNADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAATEKGDYDYTKA 187 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + + +++G E G+P D +KI G + LN+SVA G+L+ E +Q Sbjct: 188 NYKDPVCIIMGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEAVKQ 243 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 20/250 (8%) Query: 110 VYGENACQALFQS----RPEAIVRAWFIQSVTPRFKEALRWMAANRKA-YHVVDEAELTK 164 +YG++AC + ++ E ++ FI P K +A NRK V+ A++ Sbjct: 12 IYGKHACLSALKNPNRVCIELLITHKFIDKNDPVIK-----LAKNRKIGIRDVEIAKIDS 66 Query: 165 ASGTE--HHGGVCFLIKK--RNGTT---VQQWVSQ--AGAQDCVLALENESNPHNLGGMM 215 G++ H G + ++ RN ++ ++ V+Q A +L L+ ++ HN+G ++ Sbjct: 67 LVGSKAIHQGMLLKVLPLFGRNASSLIRIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVL 126 Query: 216 RSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGD-NIVNVLDDFRQAGYTVVT 274 R+ A F V VV+ + + A GA + P+ N+V L+ +Q Y Sbjct: 127 RTAACFNVDAVVLTEHNSPSESCGMAKASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYG 186 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + G L + + V++LG E +G+ + D VKI + + LN+S A + Sbjct: 187 FDASGGTCLHQVEFSERRVVILGAEGKGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAI 246 Query: 335 LLGEWWRQNK 344 + + +K Sbjct: 247 AMYSVFLGDK 256 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 2/147 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 ++ ++ +PHNLG ++RS G GV++ ++ + G A +++ G H+ N Sbjct: 146 IIVCDSLQDPHNLGAIVRSALASGAIGVLLTRERSAPLGGTAAKSSAGAISHMDICQVTN 205 Query: 258 IVNVLDDFRQAGYTVV-TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 +V L + ++ G V LF L +V+G E G+ R D+++ Sbjct: 206 LVKSLAELKKVGAWVFGAIKDADAVSLFDADLNVPACIVVGSEGTGIRPLVRRECDIQLS 265 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQN 343 I G + LN SVA V+L E RQ+ Sbjct: 266 IPMVGELDSLNSSVAAAVILFEAMRQS 292 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 2/147 (1%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDN 257 V+ L+ +P N+G ++RS G VV+ ++ L + +R+ G H+ PI + Sbjct: 117 VVVLDGVRDPGNVGTIIRSADAVGADAVVLGKGSVDLYNPKTVRSTMGSLFHL-PIIEAD 175 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + +L + + G +V TS + + A L++G E EGL DA R D V I Sbjct: 176 LAELLPEAQSKGIKLVGTSLQATHTCYTYDWTAGTWLLMGNESEGLSDAVRLAVDESVII 235 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQNK 344 G LN+++A VLL E RQ K Sbjct: 236 PMQGEAESLNVAMAATVLLYEAVRQRK 262 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 4/212 (1%) Query: 131 WFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWV 190 +F Q+ R + L + +N + + DE + A TE GV L+K + T + Sbjct: 74 FFSQAAEDRAGKLLPQIHSNVETLLLPDEV-FSSAVLTESPQGVAALVKLK---TFKLED 129 Query: 191 SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHV 250 +L + +P NLG ++RS FG GV++ D + G+ Sbjct: 130 LLRAENPMLLGVAGVQDPGNLGTILRSAEAFGATGVLIGDKTASPWNPKVIRGSSGSVFR 189 Query: 251 QPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDP 310 P+ L+ R G ++ TSS +G+PL + ++++G E G+P Sbjct: 190 LPVVKVEWPAALEQLRAKGVQILATSSHKGEPLPEVDFTGPTIVLIGGEGAGVPRDVLAS 249 Query: 311 NDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 D + I + V LN +A +++ E RQ Sbjct: 250 VDGTLAIPHSPKVESLNAGIAASIVMYEAARQ 281 >UniRef50_A3HSD9 SpoU protein (SpoU) n=1 Tax=Algoriphagus sp. PR1 RepID=A3HSD9_9SPHI Length = 234 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 17/149 (11%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRT----AEGGAE------H 249 + LEN PHN ++R+C FG+ QD ++E + G ++ + Sbjct: 42 VVLENIYKPHNASAVLRTCDCFGI-----QDVHIIEKTREYKVNPFVTRGASQWLTLHKY 96 Query: 250 VQPITGDN-IVNVLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAA 307 QP +N ++N + G+ + TS + Q +P+ K+ LV G E+EG+ + Sbjct: 97 FQPEEPENAVINCFSSLKSNGFKIYGTSPDPQTRPIQDLDPNEKIALVFGNEHEGISNEV 156 Query: 308 RDPNDLRVKIDGTGNVAGLNISVATGVLL 336 ++ D V I G NISVA + L Sbjct: 157 KNAADGLVHIPMRGFTESFNISVAASLFL 185 >UniRef50_C6LXT0 TAR RNA loop binding protein, putative n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LXT0_GIALA Length = 1676 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%) Query: 210 NLGGMMRSCAHFGVKGVVVQDAALLES---GAAIRTAEG--GAEHVQPITGDNIVNVLDD 264 NLGG+ R+ FG++ +V+ +A+ A TA+ E VQP ++ + + Sbjct: 1528 NLGGLARTAEIFGLESLVLGNASFATDPSFKAMSMTADMWLKIEEVQP---HRLIQWIAE 1584 Query: 265 FRQAGYTVVT-TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 ++ GY++V S + L LP K VLVLG E G P+ D+ V+I GN Sbjct: 1585 KKKDGYSIVCLEQSSRSVYLQDAELPQKAVLVLGNERNGCPEEILSLCDMTVEIQQIGNT 1644 Query: 324 AGLNISVATGVLLGEWWRQNK 344 LN+ V+ + + +W Q++ Sbjct: 1645 RSLNVHVSCAIFIWKWACQHR 1665 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 1/145 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 V+ L+ ++ +N+G ++RS A F V V++ + + E+ R + G A+ V + N Sbjct: 110 VVLLDQVTDINNVGAIVRSAACFDVDAVILPEHHSPSENCIITRVSSGAADLVPVVRVGN 169 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 +V ++ +Q GY + K L + S + ++LG E +G+ R+ D VKI Sbjct: 170 LVKTMEYLKQNGYWCYGMDVDGDKALHEISFCERRAIILGSEGKGIRRLTREHCDHLVKI 229 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQ 342 + + LN+S A ++L + Q Sbjct: 230 PMSARINSLNVSNAAAIVLYSSYLQ 254 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 1/155 (0%) Query: 192 QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA-AIRTAEGGAEHV 250 + G ++ L+ ++ N G ++R+ A G +++ G+ +I+T+ G V Sbjct: 93 EKGKNPLLVILDRITDVRNFGSIIRTSACVGADAIIIPKKYTAMIGSDSIKTSSGALFKV 152 Query: 251 QPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDP 310 NI N ++ +G +V+ + + + L+LG E +G+ + Sbjct: 153 PICQEKNIKNTIEFLMNSGLKIVSATEKSNIYWYNIDFSGPTALILGNEEKGISPKYLEI 212 Query: 311 NDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 + + KI ++ LN+SVA GV+L E +RQ K+ Sbjct: 213 SCEKAKIPAIKGISSLNVSVACGVILYEVFRQRKS 247 >UniRef50_A8ER65 tRNA methyltransferase, TrmH family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ER65_ARCB4 Length = 229 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 25/242 (10%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 +YG+ + ++ P+ + + + + + +++ +K + + ++ A G Sbjct: 3 IYGKQIVLYVLENHPKLVEEVFLSKEIDNKLFS--KFLKLGKKIHRLDNQKAQALAKGGN 60 Query: 170 HHGGVCFLIKKRNGTTVQQW----VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H G F +K + Q+ + + A + +L L+ ++ N+G + R+ G+ G Sbjct: 61 HQG---FFLK------LSQFDYAPIKELKAMNFILVLDGVTDVGNIGAIARTAYSLGIDG 111 Query: 226 VVVQDAALLESGAAIRTAEGGAEH----VQPITGDNIVNVLDDFRQAGYTVV--TTSSEQ 279 ++ + + + +RT+ G + P + D ++D AG+T++ T Sbjct: 112 IIASNIKTINNSGIVRTSAGALLDLPFCIHPRSADLASELID----AGFTLIGATMDGVD 167 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K K K+ L LG E EG+ DL+V I LN+SVA G+L+ Sbjct: 168 LKKYGKIEKSDKVALFLGSEGEGISPKVAKKLDLKVSIKMEHEFDSLNVSVAAGILIYNL 227 Query: 340 WR 341 R Sbjct: 228 KR 229 >UniRef50_Q6FPX7 Strain CBS138 chromosome I complete sequence n=1 Tax=Candida glabrata RepID=Q6FPX7_CANGA Length = 384 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 14/153 (9%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNI 258 + L+ ++PHN+G ++RS G V + G + +T+ G +++ D Sbjct: 230 IYLDEVTDPHNMGAIIRSAFFLGADFVALSRKNCAAIGPVVAKTSSGAVDYLPMFYVDKP 289 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKP----------LFKTSLPAKMVLVLGQEYEGLPDAAR 308 + + + G+TVV++S K L S ++LV+G EY G+ + Sbjct: 290 LKFFELSQAEGWTVVSSSHGHSKKDVAKTLDLGDLHNMSHSMPILLVMGNEYSGIRTNLK 349 Query: 309 DPNDLRVKIDGTGN---VAGLNISVATGVLLGE 338 +D V I N V LN+SVATG+LL + Sbjct: 350 QRSDFLVAIPQMTNNSTVDSLNVSVATGILLSK 382 >UniRef50_A1B8P8 RNA methyltransferase, TrmH family, group 3 n=29 Tax=Rhodobacterales RepID=A1B8P8_PARDP Length = 265 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 11/186 (5%) Query: 153 AYHVVDEAELTKA----SGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNP 208 A+ +VD +A + + H G + + G+ V +S G + ++AL+ ++P Sbjct: 69 AHEIVDARTFDRAVPLPAESVHQGAALEVRPLKWGSLVDLALSGPG-RPLLVALDRVTDP 127 Query: 209 HNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 HN+G ++RS FG + V+ + E+GA +TA G E + N+ + L + + Sbjct: 128 HNVGAILRSAEVFGARAVIAPARHSAPETGALAKTASGALERQPYLRVTNLADTLIELQS 187 Query: 268 AGYTVVTTSSEQGKPLFKTSLP----AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 GYTV+ G L +L + LVLG E GL + R+ D ++I + Sbjct: 188 MGYTVLGLDG-TGDELLPEALRDLSGRAICLVLGAEGPGLRERTRETCDRILRIPFAADF 246 Query: 324 AGLNIS 329 LN+S Sbjct: 247 GSLNVS 252 >UniRef50_A7BZJ1 SpoU rRNA Methylase family n=1 Tax=Beggiatoa sp. PS RepID=A7BZJ1_9GAMM Length = 141 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 1/129 (0%) Query: 215 MRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 MR+ G++ ++V ++ A+ + A G A++V I N+ L ++ G +V Sbjct: 1 MRTADVAGIQAIIVPKNNAVKLTSIVHAVACGAADNVPLIEVTNLARTLRWLQEQGVWIV 60 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 T + LF+T+L + V G E GL ++ D+ V+I G + LN+SVATG Sbjct: 61 GTDENSQESLFETNLTGPLAFVFGSEGTGLRRLTKETCDILVRIPSLGKIKSLNVSVATG 120 Query: 334 VLLGEWWRQ 342 + L E RQ Sbjct: 121 ICLYEAVRQ 129 >UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B15F Length = 242 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 7/146 (4%) Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITG 255 D VL L+ +P NLG ++RS FG K +V+ D L + A+R+ +G H+ I Sbjct: 96 DRVLILDGVQDPGNLGTILRSALAFGFKQIVMSPDCVDLYNDKALRSTQGAVFHLD-IVR 154 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND--L 313 D++ +V+ + ++ G V+ TS + KM V+G E G+ D +D L Sbjct: 155 DDLHHVIPELQKLGVRVIATSLHNASSIDDIKSTDKMAFVMGNEGNGVRDETIAMSDASL 214 Query: 314 RVKIDGTGNVAGLNISVATGVLLGEW 339 + ID + LN+ VA G+++ + Sbjct: 215 YIPID---TMESLNVGVAAGIVMYTF 237 >UniRef50_B3LA97 rRNA methylase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3LA97_PLAKH Length = 2247 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 7/139 (5%) Query: 210 NLGGMMRSCAHFGVKGVVVQDAALLE--SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 NL G+ R+C F V+ +++ +A +++ I + ++ + I+ L D R+ Sbjct: 2109 NLAGLCRTCEIFKVQKLILHNANIVKDFQFQKISSTANKWMNIGEVKKGEILKYLMDKRK 2168 Query: 268 AGYTVVTTSSEQGK---PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 Y++V EQ K PL + P K VL+LG E EGLP + ++I G G + Sbjct: 2169 KNYSIV--GLEQTKCSVPLNNFTFPEKTVLILGDEKEGLPASVLLFLHHCIEIPGKGIIR 2226 Query: 325 GLNISVATGVLLGEWWRQN 343 LN+ V+ + + E++RQ+ Sbjct: 2227 SLNVHVSAAITIYEYFRQH 2245 >UniRef50_C1F3I9 RNA methyltransferase, TrmH family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3I9_ACIC5 Length = 283 Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 142 EALRWMAANRKAYHVVDEAEL--------TKASGTEHHGGVCFLIKKRNGTTVQQW--VS 191 EAL +AA + +D AE+ + A TE G+ L+ W + Sbjct: 69 EALERVAAKAPSRAALDTAEILELPADIFSSAVDTESPQGIAALLAPPRF----DWDDLF 124 Query: 192 QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQ 251 A A +L + +P NLG ++RS FG G++ + A + A G+ Sbjct: 125 PAHAPALLLVTASLQDPGNLGTLIRSAEAFGASGILTLPGTVNLWNAKVVRASAGSVFRM 184 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPN 311 P+ VL G T+ T+++ P + +L L++G E GL Sbjct: 185 PVVARCEEEVLARLAAQGVTLFATTADGDLPATQAALTQPCALLIGNEGAGLTPHLLQAA 244 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 D R+ I G V LN ++A +LL E RQ A Sbjct: 245 DARLAIPTPGPVESLNAAIAGSILLYEASRQRAA 278 >UniRef50_A7NNQ2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Roseiflexus RepID=A7NNQ2_ROSCS Length = 496 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 11/155 (7%) Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA------AIRTAEGGA 247 G + +LA E +NP NLG +R+ GV+ V+V SGA +R A G Sbjct: 331 GRRAVILATEQINNPENLGMTLRTADAAGVEAVIVAG-----SGADPFHRECVRAARGAV 385 Query: 248 EHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAA 307 + T ++ + R G VV + + L+ LP +++++G E EGL DA Sbjct: 386 GRIPIYTCADLPTWVGQARARGIHVVGATGNVERTLYDADLPLPLMIIVGNETEGLTDAT 445 Query: 308 RDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 V+I LN+ VA GV+L + R+ Sbjct: 446 LAVCSSLVRIPMAPGQDSLNVGVAAGVILYDIVRR 480 >UniRef50_D1R685 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R685_9CHLA Length = 254 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 10/181 (5%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 VD+A L K SG +H GV +K + + ++ S +L L ++P NLG ++R Sbjct: 78 VDQAILDKISGMQHSPGVLAEVKMPSPSPLKNIRS-------LLVLNQINDPGNLGTLIR 130 Query: 217 SCAHFGVKGV-VVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 S FG +G+ +V + + + AIR+A G + GD + L++ Sbjct: 131 SALAFGWEGIFIVNQSCDIFNEKAIRSARGATFRLPYRKGD--LQELEEILTHNKLTTWV 188 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + G P+ + P K+ LVL E G+ + V I +G + LN++VA +L Sbjct: 189 ADVSGTPMQDITPPEKVALVLSNEARGVSSSTHPLFSQHVTIPMSGKMESLNVAVAGAIL 248 Query: 336 L 336 L Sbjct: 249 L 249 >UniRef50_C7MEI2 rRNA methylase n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MEI2_BRAFD Length = 295 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 1/149 (0%) Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGD 256 V+ L +P N+G ++R+ G V++ + +A S A+R A G H+ +TG Sbjct: 145 TVVVLHEVRDPGNVGTLIRTADAAGADLVLLTRTSADPYSPKAVRAATGSLFHLPVLTGA 204 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 I +VL G T TS LF LP ++ + G E GL A D LRV+ Sbjct: 205 EIGDVLAALAAGGLTAAATSGHASSELFDVELPPRIAWIFGNEAHGLDRATLDAAPLRVR 264 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQNKA 345 I G LN+ A V L E R+ +A Sbjct: 265 IPLAGRAESLNVHTAATVCLFETLRRRRA 293 >UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2Z7_9CYAN Length = 269 Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 1/145 (0%) Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNI 258 LAL+ NP N+G ++R+C G G+++ + + I+ + G A + + + + Sbjct: 116 LALDGVKNPSNVGMIIRTCLAAGFDGIILPRKGCPDLNPLVIKASAGTAFYTRVLRCAEL 175 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + L RQA YT+ S L+ S V VLG E EG+ + D V I Sbjct: 176 SDALQQLRQANYTIYGLSGTATSTLYNLSFSPFSVFVLGNETEGINRDHHNLIDTWVSIP 235 Query: 319 GTGNVAGLNISVATGVLLGEWWRQN 343 LN++ A V+ E RQ+ Sbjct: 236 IEFPAESLNVASAAAVVCFELKRQH 260 >UniRef50_Q7S731 Predicted protein n=2 Tax=Sordariaceae RepID=Q7S731_NEUCR Length = 644 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 27/182 (14%) Query: 182 NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV--QDAALLESGAA 239 NG + S A + V+ ++ +P NLG ++RS + G V + +D+A L + A Sbjct: 448 NGKSDFVAASSATHKPLVVVVDQILDPGNLGAILRSVSFLGATAVAITKRDSASL-TPVA 506 Query: 240 IRTAEGGAEHVQPITGDNIVNVLDDFRQAG---YTVVTTSS--------------EQGKP 282 ++ + G +E + + D++ L D R+ G Y V +S E+ P Sbjct: 507 LKASAGASESLTLFSIDHLPKFLQDSRENGWLVYAAVPRTSGSGNLQKHLDLHEIEEIDP 566 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI---DGTGNVAGLNISVATGVLLGEW 339 L K +L+LG E EGLP + D V I G + LN+SVA G+L + Sbjct: 567 LGKNPC----ILLLGSEGEGLPGQIKSKADYEVNIPNMSGGTVIDSLNVSVAAGLLTSAF 622 Query: 340 WR 341 + Sbjct: 623 MK 624 >UniRef50_A8BHT7 TAR RNA loop binding protein, putative n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8BHT7_GIALA Length = 1127 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 9/141 (6%) Query: 210 NLGGMMRSCAHFGVKGVVVQDA--ALLESGAAIR-TAEG--GAEHVQPITGDNIVNVLDD 264 NLGG+ R+ FG+ +V+ + AL S A+ TA+ E VQP N+V + + Sbjct: 985 NLGGLARTAEVFGLDTLVLGNTSFALDPSFKAMSMTADMWLNIEEVQPC---NLVQWIAE 1041 Query: 265 FRQAGYTVVT-TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 ++ Y+VV S + L LP K VLVLG E +G P+ D+ V+I GN+ Sbjct: 1042 KKKDDYSVVCLEQSSRSVYLQDADLPRKAVLVLGNERKGCPEEILSLCDMTVEIQQLGNI 1101 Query: 324 AGLNISVATGVLLGEWWRQNK 344 LN+ V+ + + +W Q++ Sbjct: 1102 RSLNVHVSCAIFVWKWACQHR 1122 >UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulobacteraceae RepID=B8H4C5_CAUCN Length = 278 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 3/169 (1%) Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD 230 H G+ I + T+ + + A + ++ L+ ++P N+G + RS A FG KGV++QD Sbjct: 100 HQGLALKIDEPEPLTIAELGTPA--KGFLVMLDQITDPQNIGAIFRSAAAFGAKGVILQD 157 Query: 231 -AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 A SG +TA G + N+ L++ G+ V + E + L Sbjct: 158 RHAPALSGVLAKTAVGAVDKAPYARVVNLSRALEELADLGWRAVALAGEAEQSLDAVLDS 217 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 VLVLG E EG+ + D KI G LN+S A + L E Sbjct: 218 QPTVLVLGSEGEGVRRLVAEHCDALGKIPMPGGFESLNVSAAAAIALYE 266 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 4/190 (2%) Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGG 213 VD+ + K + H GV + ++V + + A + ++ L+ ++PHNLG Sbjct: 51 VDKKYIEKFAENTAHQGVMAKMPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGS 110 Query: 214 MMRSCAHFGVKGVVVQDAALLESGA-AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++R+ G GV++ E A AI+T+ G +++ NI ++ ++ + Sbjct: 111 IIRTAEVAGCHGVIIPKHRACEVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWI 170 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 E + + +L + LV+G E +G+ R+ D +KI G LN S A Sbjct: 171 YGACGEASQTHTQANLKGPIGLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAA 230 Query: 333 GVLLGEWWRQ 342 +L+ E RQ Sbjct: 231 SILIYEIIRQ 240 >UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Proteobacteria RepID=A6Q869_SULNB Length = 263 Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 1/138 (0%) Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 ++AL+ +NP NLG ++RSCA + +++ A S I+ + G + I N Sbjct: 123 IIALDGVTNPQNLGMIIRSCAAGNIDAILLPTKGAAQISPLVIKASVGTLFKMSIIKTSN 182 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + L FR+ G ++ T SS K + K + VLG E EG+ A + + I Sbjct: 183 LKETLKHFRKEGASLYTLSSHADKSYKEQIYSEKTIFVLGNESEGVSPAVEKLCNASIAI 242 Query: 318 DGTGNVAGLNISVATGVL 335 V LN++V +L Sbjct: 243 PMQRGVESLNVAVTASLL 260 >UniRef50_A0NEI0 AGAP005789-PA n=3 Tax=Culicidae RepID=A0NEI0_ANOGA Length = 1402 Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 5/138 (3%) Query: 210 NLGGMMRSCAHFGVKGVVV---QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 NLGG+ R+ F +K +V+ QD E A TAE + + + +V L + + Sbjct: 1259 NLGGLARTGEIFAIKQLVINSLQDIGNKEFQALSMTAEKWLK-IGELKTHRVVEYLREMK 1317 Query: 267 QAGYTVVTTSSEQG-KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325 + GY+VV G K + + P K VLVLG E GLP DL +I G V Sbjct: 1318 EKGYSVVGAEQTTGSKAIHQLQFPKKSVLVLGHEKNGLPAEIIRHLDLIGEIPQFGVVRS 1377 Query: 326 LNISVATGVLLGEWWRQN 343 LN+ V + + E+ +Q+ Sbjct: 1378 LNVHVTGAIFMWEYAKQH 1395 >UniRef50_C9RLF7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLF7_FIBSS Length = 371 Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 18/310 (5%) Query: 41 KSRADGGRRPARDDKQSQPRDR-KWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 + R D RP+R D DR + D P R E E D + ++F+ P V Sbjct: 66 RDRDDFANRPSRFDS-----DRPSFGDRPKRIEGERNFGERRE-FDKSRANQENFV-PAV 118 Query: 100 LRRQRAEETRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVD 158 A + V G + L P + R F+ +S P+ E + A R HV Sbjct: 119 GDADAAPQVAVGGIKEVEELLNKNPLQVHRVLFMHKSGNPKLYELQKL--AKRAHVHVQQ 176 Query: 159 -EAELTKASGTEHHGGVCFLIKKR--NGTTVQQWVSQA---GAQDCVLALENESNPHNLG 212 ++++ + +HG V + +K N V++ +A G + + N +P NLG Sbjct: 177 VDSKILDSYARPNHGVVALMNEKELLNWMDVREEFFKARDTGEKKLIAVATNIEDPRNLG 236 Query: 213 GMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYT 271 +RS GV +++ + ++ RT+ G E ++ DN+ + + + AGY Sbjct: 237 ACIRSSLALGVDILLLPAKGMCGITPSVARTSAGALEKLRICRPDNLEGAIGELKMAGYQ 296 Query: 272 VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 ++ ++ L +VL +G E GLP + D ++I N SVA Sbjct: 297 ILGLDADTETNLAGFDFADHVVLAVGGEDVGLPPFIKKQCDAVLRIPMKPEAHSYNASVA 356 Query: 332 TGVLLGEWWR 341 + L E+ R Sbjct: 357 LSLGLYEYAR 366 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AGJ6 Uncharacterized tRNA/rRNA methyltransferase yfiF... 482 e-135 UniRef50_C6CLV0 tRNA/rRNA methyltransferase (SpoU) n=25 Tax=Ente... 374 e-102 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 313 6e-84 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 303 6e-81 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 302 1e-80 UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=She... 291 2e-77 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 287 5e-76 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 285 1e-75 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 283 6e-75 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 283 6e-75 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 279 9e-74 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 279 1e-73 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 278 2e-73 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 278 2e-73 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 277 4e-73 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 276 8e-73 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 276 8e-73 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 274 4e-72 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 273 5e-72 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 272 1e-71 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 272 1e-71 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 272 1e-71 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 272 2e-71 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 271 3e-71 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 270 6e-71 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 270 7e-71 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 269 8e-71 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 269 1e-70 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 268 1e-70 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 268 1e-70 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 268 1e-70 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 268 2e-70 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 268 2e-70 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 267 3e-70 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 267 3e-70 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 267 5e-70 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 267 6e-70 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 266 7e-70 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 266 7e-70 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 266 7e-70 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 266 9e-70 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 266 1e-69 UniRef50_P44703 Uncharacterized tRNA/rRNA methyltransferase HI04... 266 1e-69 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 265 2e-69 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 264 4e-69 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 263 4e-69 UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonad... 263 4e-69 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 263 5e-69 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 263 7e-69 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 262 1e-68 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 262 1e-68 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 262 2e-68 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 261 3e-68 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 261 3e-68 UniRef50_Q0I1J4 tRNA/rRNA methyltransferase n=2 Tax=Histophilus ... 260 5e-68 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 260 7e-68 UniRef50_B8F579 rRNA methyltransferase n=5 Tax=Pasteurellaceae R... 259 1e-67 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 259 1e-67 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 258 2e-67 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 258 2e-67 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 258 3e-67 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 257 3e-67 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 257 4e-67 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 257 4e-67 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 257 5e-67 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 257 7e-67 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 256 7e-67 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 256 9e-67 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 256 1e-66 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 255 1e-66 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 255 1e-66 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 255 2e-66 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 255 2e-66 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 254 3e-66 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 254 3e-66 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 254 3e-66 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 254 3e-66 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 253 5e-66 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 253 5e-66 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 252 1e-65 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 252 1e-65 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 251 3e-65 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 250 5e-65 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 250 5e-65 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 249 9e-65 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 249 1e-64 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 249 1e-64 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 249 1e-64 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 249 1e-64 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 248 2e-64 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 247 4e-64 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 247 4e-64 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 247 5e-64 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 246 8e-64 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 243 5e-63 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 243 5e-63 UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 ... 243 5e-63 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 243 6e-63 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 243 6e-63 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 243 7e-63 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 243 8e-63 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 243 9e-63 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 243 1e-62 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 242 1e-62 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 242 2e-62 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 241 3e-62 UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 ... 241 3e-62 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 240 4e-62 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 240 4e-62 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 240 5e-62 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 240 6e-62 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 240 6e-62 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 240 7e-62 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 240 7e-62 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 240 8e-62 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 238 2e-61 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 238 2e-61 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 238 3e-61 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 237 5e-61 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 237 6e-61 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 236 8e-61 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 236 8e-61 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 236 9e-61 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 236 1e-60 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 236 1e-60 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 236 1e-60 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 235 1e-60 UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5G... 235 1e-60 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 235 2e-60 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 235 3e-60 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 235 3e-60 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 235 3e-60 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 234 3e-60 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 234 4e-60 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 234 4e-60 UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, grou... 234 4e-60 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 234 4e-60 UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_... 233 6e-60 UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 ... 233 8e-60 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 233 9e-60 UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Ba... 232 1e-59 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 232 1e-59 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 232 1e-59 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 232 1e-59 UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia ... 232 2e-59 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 232 2e-59 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 231 4e-59 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 231 4e-59 UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitu... 230 5e-59 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 230 6e-59 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 230 8e-59 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 229 1e-58 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 229 1e-58 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 229 1e-58 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 228 2e-58 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 228 2e-58 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 228 2e-58 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 228 2e-58 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 228 2e-58 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 228 2e-58 UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular or... 228 2e-58 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 228 3e-58 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 228 3e-58 UniRef50_Q73J63 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 228 3e-58 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 228 3e-58 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 226 1e-57 UniRef50_C9RLF7 RNA methyltransferase, TrmH family, group 3 n=1 ... 226 1e-57 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 225 2e-57 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 225 2e-57 UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 ... 225 3e-57 UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 224 3e-57 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 224 4e-57 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 224 4e-57 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 223 6e-57 UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Aceto... 223 6e-57 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 223 6e-57 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 222 1e-56 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 222 1e-56 UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax... 222 2e-56 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 222 2e-56 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 221 3e-56 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 221 4e-56 UniRef50_B2S202 Putative uncharacterized protein n=2 Tax=Trepone... 221 4e-56 UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 220 5e-56 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 220 5e-56 UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desul... 220 5e-56 UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16... 220 6e-56 UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 ... 220 7e-56 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 219 1e-55 UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomona... 219 1e-55 UniRef50_A8ER65 tRNA methyltransferase, TrmH family n=1 Tax=Arco... 218 2e-55 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 217 4e-55 UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma p... 217 5e-55 UniRef50_Q30P99 RNA methyltransferase TrmH, group 3 n=2 Tax=Camp... 216 1e-54 UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0... 216 1e-54 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 215 2e-54 UniRef50_C5EXS0 RNA methyltransferase n=2 Tax=Helicobacter RepID... 215 2e-54 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 215 2e-54 UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium ce... 214 4e-54 UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 ... 214 4e-54 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 214 4e-54 UniRef50_B6IWB6 RNA methyltransferase, TrmH family n=6 Tax=Prote... 213 6e-54 UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachy... 213 9e-54 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 213 1e-53 UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Myc... 212 2e-53 UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhod... 211 2e-53 UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 ... 210 8e-53 UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax... 210 9e-53 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 210 9e-53 UniRef50_A6Q6S3 RNA methyltransferase, TrmH family n=2 Tax=Epsil... 209 1e-52 UniRef50_C0EHG6 Putative uncharacterized protein n=2 Tax=Clostri... 209 1e-52 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 208 2e-52 UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax... 208 2e-52 UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulob... 208 2e-52 UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13... 208 2e-52 UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax... 207 6e-52 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 206 8e-52 UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D... 206 8e-52 UniRef50_B6JLD6 23S rRNA methyltransferase n=13 Tax=Helicobacter... 206 9e-52 UniRef50_C0QYW1 RNA methyltransferase, TrmH family, group 3 n=1 ... 206 9e-52 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 206 1e-51 UniRef50_A3VTQ4 RRNA methylase n=1 Tax=Parvularcula bermudensis ... 206 1e-51 UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 ... 206 1e-51 UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, s... 205 1e-51 UniRef50_A0RMQ8 RNA methyltransferase, TrmH family, group 3 n=5 ... 205 2e-51 UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39... 205 2e-51 UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepI... 205 2e-51 UniRef50_C8PM13 RNA methyltransferase, TrmH family n=1 Tax=Trepo... 205 3e-51 UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 ... 204 4e-51 UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostri... 204 5e-51 UniRef50_Q5WEJ4 23S rRNA methyltransferase n=2 Tax=Bacilli RepID... 204 5e-51 UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Prote... 204 5e-51 UniRef50_C1SL80 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus... 203 6e-51 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 203 7e-51 UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veill... 203 8e-51 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 203 1e-50 UniRef50_UPI00006CAEFD RNA methyltransferase, TrmH family protei... 202 1e-50 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 202 2e-50 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 202 2e-50 UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus A... 202 2e-50 UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia agg... 201 3e-50 Sequences not found previously or not previously below threshold: UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 226 7e-58 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 219 1e-55 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 214 5e-54 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 212 1e-53 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 211 3e-53 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 211 3e-53 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 210 8e-53 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 208 3e-52 UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selen... 201 4e-50 >UniRef50_P0AGJ6 Uncharacterized tRNA/rRNA methyltransferase yfiF n=148 Tax=Enterobacteriaceae RepID=YFIF_ECO57 Length = 345 Score = 482 bits (1242), Expect = e-135, Method: Composition-based stats. Identities = 345/345 (100%), Positives = 345/345 (100%) Query: 1 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR 60 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR Sbjct: 1 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR 60 Query: 61 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF 120 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF Sbjct: 61 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF 120 Query: 121 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK Sbjct: 121 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 Query: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI 240 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI Sbjct: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI 240 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY Sbjct: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 Query: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA Sbjct: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 >UniRef50_C6CLV0 tRNA/rRNA methyltransferase (SpoU) n=25 Tax=Enterobacteriaceae RepID=C6CLV0_DICZE Length = 397 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 227/399 (56%), Positives = 267/399 (66%), Gaps = 60/399 (15%) Query: 1 MNDEMKGKSGKVKVMYVRSDDDSDK-----RTHNPRTGKGG------------------- 36 M+D + GK GKV+VMYVRS+D +K RT + R G G Sbjct: 1 MSDTLSGKGGKVRVMYVRSEDGDEKNGKPKRTSDKRRGDGDNTRGGGRKGRDGAPRGGRD 60 Query: 37 -----GRPGKSRADGGR--RPARDDKQSQPRDRKWE------------------------ 65 GR R G R RD+ + RD Sbjct: 61 NAERGGRDNAERGGRGNAERGGRDNAERGGRDSAERGGKWRGESAGRERPRPPRREPVEH 120 Query: 66 -DSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRP 124 DSPW+TVSRAPG E DHGGISGKS +DPE +RRQRAEETRVYGENACQALF SRP Sbjct: 121 ADSPWKTVSRAPG----ETPDHGGISGKSQVDPEQIRRQRAEETRVYGENACQALFLSRP 176 Query: 125 EAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT 184 EAIVR WF+Q VTPRF++ALRWMAANRKAYHVV++ EL +ASGTEHHGGVCFLIKKR G Sbjct: 177 EAIVRGWFLQEVTPRFRDALRWMAANRKAYHVVEDDELVRASGTEHHGGVCFLIKKRQGL 236 Query: 185 TVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAE 244 V ++ +AG DCVLALE+ NPHNLGG+MRSCAHFGVKGV+V DA+ LESGAA+RTAE Sbjct: 237 DVAAYLREAGETDCVLALEDVGNPHNLGGIMRSCAHFGVKGVLVNDASQLESGAAVRTAE 296 Query: 245 GGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLP 304 GGAEHV+ I+ + +V+ L FR AGYT+VTTSS +G L K +LPAK V+VLGQE +GL Sbjct: 297 GGAEHVKAISAEGLVDALAQFRAAGYTIVTTSSHKGTTLSKVALPAKSVIVLGQEGDGLS 356 Query: 305 DAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D+A D++V IDGTGNV LNISVATG+LL EWWRQ+ Sbjct: 357 DSAWQQGDVKVSIDGTGNVESLNISVATGILLAEWWRQH 395 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 84/349 (24%), Positives = 142/349 (40%), Gaps = 30/349 (8%) Query: 8 KSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDS 67 +SGK++ R+ KR P+ + G P + + +P R D Q R+W Sbjct: 15 RSGKLQPR--RAGQSVSKRVQRPK--RRDGDPKLALREAPVKPIRRDAQ-----RQW--- 62 Query: 68 PWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQ-------RAEETRVYGENACQALF 120 P ++ P E D G +G++ I P ++ Q E+ +YG A Sbjct: 63 PQGKMAPQPVGEL----DPGLSTGETGILPGEVQPQADGNPETELEQEIIYGRQTVLAAL 118 Query: 121 QSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLI 178 +S+ + R W + + +P+F L A V L + +H G+ Sbjct: 119 KSQA-TLNRVWILPKLRYSPQFLSLLEEAKARGTVIDEVSPKRLNALTAGANHQGIAAQA 177 Query: 179 KKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALL 234 ++ V QAG ++ L+ +PHNLG + RS FG++G+V+ A Sbjct: 178 TPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRRAAG 237 Query: 235 ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVL 294 + ++ A G + N+ L+ ++ G+ V T+S P++ + L Sbjct: 238 VTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTTSRGADPIYSADFQRPIAL 297 Query: 295 VLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 V+G E EG+ + D + I G LN SVA G+ L E RQ Sbjct: 298 VVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQR 346 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 80/360 (22%), Positives = 147/360 (40%), Gaps = 30/360 (8%) Query: 11 KVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGR--RPARDDKQSQPRDRKWEDSP 68 K R D P+ + G +P + D + + D Q +PR R +D P Sbjct: 8 KFSPRSAR-GDKPRYGEQKPKLKRSGDKP-RFNDDQPQGFKEKSDRFQDKPRPRTNDDKP 65 Query: 69 WRTVSRAP----------------GDETPEKADHGGISGKSF-IDPEVLRRQRAEE--TR 109 R + GD+ P ++ GK+F P + ++A+E Sbjct: 66 RRAGDKPSNFKSRFKDKDRDKPRYGDDRPRRSGQKPPFGKTFPAAPPPMDSEQAQEALDL 125 Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTP--RFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG +A A + R W + R++ ++ AN VD L + + Sbjct: 126 LYGHHAVLAALDGD-RQLNRIWITSHLRHDIRYRTKIQTAKANGTVVDEVDNFRLNQITH 184 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVK 224 +H G+ + + + + +A +Q ++ +++ ++PHNLG ++R+ FG + Sbjct: 185 NANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFGAQ 244 Query: 225 GVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 G+V+ + + ++ A G EH N+ L+ +++G+ + T + + L Sbjct: 245 GMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGTVAGKQTAL 304 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L M LV+G E EGL + D + I G LN SVA + L E +RQ Sbjct: 305 HQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQR 364 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 88/338 (26%), Positives = 141/338 (41%), Gaps = 14/338 (4%) Query: 14 VMYVRSDDDSDKRTHNPRTGKG--GGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRT 71 + DD KR++ R +G P + R+D + D+ + DR R Sbjct: 199 PRFSGRPDDDGKRSYERRDDQGTRSSAPNRFRSDRPAQGRFRDRSERSPDRYRSGDERRQ 258 Query: 72 VSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAW 131 S P D G S + + PE + ++G +A QA +S I R W Sbjct: 259 SSP-----RPRFGDSGPRSQRPNLQPEAEASTPPADDLIWGRHASQAALES-GRPIHRIW 312 Query: 132 FIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQW 189 + P+F + LR + V A L + +G H G+ + + Sbjct: 313 CTPEMRSAPKFLQLLREAKTSGVLVEEVTWARLAQVTGGSVHQGIALQTAAADTLDLSAL 372 Query: 190 V---SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEG 245 + S+ G +LAL+ ++PHNLG ++RS G G+V+ + +G+A + A G Sbjct: 373 IEGCSELGEPPLLLALDGITDPHNLGAVVRSAEAMGAHGLVLPQRRSAGLTGSAAKVAAG 432 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 EH+ N+ L+ + +GY V+ ++E L L +VLV G E +GL Sbjct: 433 AMEHLPVARVVNLNRSLEKLKDSGYRVIGLAAEGDVTLMDVDLEGPLVLVTGSEDQGLSL 492 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 R D V+I G LN SVAT + + E R+N Sbjct: 493 LTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRN 530 >UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8M2_SHEAM Length = 333 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 131/331 (39%), Positives = 195/331 (58%), Gaps = 36/331 (10%) Query: 49 RPARDDK-QSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDP---------- 97 RPAR D+ Q + + + + TV A G E + G SGK D Sbjct: 2 RPARADRYQGRNQQERTQGDKGSTVEHAQGREDRARKGADGCSGKGRFDRNTGSGRTERR 61 Query: 98 ------EVLRR-----------------QRAEETRVYGENACQALFQSRPEAIVRAWFIQ 134 E RR QR ETR+YG NAC+ F+ R + +++ + + Sbjct: 62 DAYHHREAPRREPAHRATGAQAGFDGKDQRLNETRLYGINACRETFKLRSDEVIKLYLDE 121 Query: 135 SVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ-- 192 P+F + ++++A NRKAYHVVD EL K +G++HHGGV +++++ + +++ Sbjct: 122 ETAPKFADVMKYLARNRKAYHVVDADELEKIAGSQHHGGVVMVVRRKPVQDIAGYLAANT 181 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQP 252 A ++DC+LAL+ NPHNLG +MRSCAHFGV G+V+ +A LL+SGAA RTAEGG EHV+ Sbjct: 182 AKSRDCLLALDGVGNPHNLGAIMRSCAHFGVAGIVMTEAGLLQSGAAARTAEGGMEHVEG 241 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 I D + + L R AGY+++TTSS G+ L+++ LPA++V+V G+E +G+ A D Sbjct: 242 IRCDRLTDALQLCRDAGYSIITTSSHGGESLYRSKLPARVVVVFGEEMDGVSKAVASRAD 301 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + V+I GTG V LN+SVA ++LGEW+RQ Sbjct: 302 IGVQIPGTGLVESLNVSVAASLILGEWYRQQ 332 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 76/338 (22%), Positives = 128/338 (37%), Gaps = 17/338 (5%) Query: 22 DSDKRTHNPRTGK----GGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPG 77 ++ T P GK G R + R+ + R +S A Sbjct: 10 STNTSTGEPNRGKPIKIKGKRVVSNPTRNPRKIDSNPISVANPTRNPRKIDSNPISVANP 69 Query: 78 DETPEKADHGGISGKSF-----IDPEVLRRQRAEET--RVYGENACQALFQSRPEAIVRA 130 P K D ISG S + Q EE +YG + + Q + + R Sbjct: 70 TRNPRKIDSNTISGNSRQRNSNFSQSPVSTQPIEEDNDIIYGRHPVLSALQ-KQRNLNRI 128 Query: 131 WFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQ 188 W + P F L N V+ L + +H GV + Sbjct: 129 WITTRLRYDPSFHHFLLQAKENGTVIDEVEPKRLDYLTNGANHQGVAAQTAPYGYIELAD 188 Query: 189 WVSQAGA--QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEG 245 + Q+ + ++ + ++PHNLG ++R+ G +G+V+ A + ++ A G Sbjct: 189 LIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIPQRRASGITSTVMKVAAG 248 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 E+ N+ L++ ++AG+ + T++ +P+ + +VLV+G E EGL Sbjct: 249 ALENFTVSRVVNLSRALEELKEAGFWIYGTAASGSEPVHTVNFKGPIVLVIGSEGEGLGM 308 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + D V I G LN SVA G+ L E +RQ Sbjct: 309 LTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQR 346 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 3/242 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELT 163 A + +YG +A A P++IV + + + R +E L A + D L Sbjct: 2 ANQRPIYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEKAANENIRVYFADADRLN 61 Query: 164 KASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 S H GV I +N ++ + +L L+ ++PHNLG +R+ G Sbjct: 62 AISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMG 121 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V V+ D + + + A G AE V IT N+ L + ++ G ++ T Sbjct: 122 VHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES 181 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ +LP V+G E +G+ R+ D+ V I G V +N+SV+ G++L E R Sbjct: 182 DLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRR 241 Query: 342 QN 343 Q Sbjct: 242 QR 243 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 3/242 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT 163 + + ++G +A A P++++ W R K L A H+VD+ L Sbjct: 2 SNKRLIHGFHAINARLWQNPKSLIEIWLAGGRHDARAKAVLDKAGAENVKLHIVDKERLD 61 Query: 164 KASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 SG H GV +I N + + +L L+ ++PHNLG +R G Sbjct: 62 SMSGNARHQGVVAMIDASMNYVDLDDVLENLSEPPLLLILDGVTDPHNLGACLRVADAMG 121 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V+ D + + + A G AE V IT N+ L D + AG + T+ E Sbjct: 122 AHAVIAPKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEADT 181 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ + V+G E EG+ R+ D+ V I G V LN+SV++G++L E R Sbjct: 182 DLYHFDASGPLAWVMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRR 241 Query: 342 QN 343 Q Sbjct: 242 QR 243 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 129/330 (39%), Gaps = 13/330 (3%) Query: 26 RTHNPRTGKGGGRP---GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSR--APGDET 80 R P+ +P K + + R R + D+ + P Sbjct: 6 RPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDITPTGAG 65 Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TP 138 P V+ AE +YG+ + A Q+ + R W + + P Sbjct: 66 SRAPKTIKTRMAPEAAPTVVESDEAE--LLYGKQSVLAALQN-SRPLNRVWLTEKLRYDP 122 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ--AGAQ 196 RF L A +V+ L + + +H GV ++ ++ Sbjct: 123 RFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAAQAAAHPYVEFEELIASLVERPD 182 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITG 255 +LA + +PHNLG ++RS FG +G+++ A+ + + A G EH+ Sbjct: 183 PVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIARV 242 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 N+ ++ ++AGY VV T + + L++ L +V+V+G E +G+ + D V Sbjct: 243 TNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMV 302 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 I G LN SVA G++L E RQ +A Sbjct: 303 SIPLAGKTTSLNASVAGGIMLYEVMRQRRA 332 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 4/242 (1%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG + +SR + + PR + + + + L + + Sbjct: 2 DVIYGIHPVSEALKSRGRSFQYVAIAKDRMDPRVQRIVEDARESGITVRFLPRDFLDRTA 61 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 T H GV + K+ + + + G V+ L+ +PHNLG ++RS GV G Sbjct: 62 NTNMHQGVIAVTSKKEYLDLDDIIEKKRGEHAFVVVLDGIEDPHNLGALIRSADGAGVDG 121 Query: 226 VVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA-GYTVVTTSSEQGKPL 283 VV+ + + +G A++ + G AE+V NI ++D + V + Sbjct: 122 VVIPERRAVGVTGTAMKASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLDERGTQNY 181 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + LVLG E +GL D R DL VKI G V+ LN+SVA G+++ E RQ Sbjct: 182 DEIDYNMSLALVLGAEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQR 241 Query: 344 KA 345 +A Sbjct: 242 RA 243 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 6/243 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELTKAS 166 ++YG +A QAL Q P+ + + W + + PR + L A NR + E+ Sbjct: 5 EKIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWV 64 Query: 167 GTEHHGGVCFLIKKRN---GTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 H GV + +++ + + +L L+ ++PHNLG +R+ G Sbjct: 65 EGV-HQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGA 123 Query: 224 KGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 V+V D + + + A G AE + + N+ L+ +Q G VV T+ E + Sbjct: 124 TAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQE 183 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +++ L +V+++G E +G+ R+ D VK+ G+V+ LN+SVATGV L E RQ Sbjct: 184 IYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQ 243 Query: 343 NKA 345 + Sbjct: 244 RQV 246 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 3/237 (1%) Query: 110 VYGENACQALFQSRPEAIVRAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G +A + + P++I + R ++ + + ++ L K +GT Sbjct: 7 IFGFHAITSRLRQHPDSIKEIYLDTNRHDQRARDLMSLAETTSTRLILCEQDRLCKMTGT 66 Query: 169 EHHGGVCFLI-KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV + K R T++ + +L L+ +PHNLG +R FGV VV Sbjct: 67 TRHQGVAAHVTKLRRYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAVV 126 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 V D A+ S + A G + V N+ L + ++ G +V T+++ L Sbjct: 127 VPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPDTLDSV 186 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +L + VLG E G+ R+ DL V I +G++ LN+SV+ G+ L E +RQ+ Sbjct: 187 TLTRPLAWVLGAEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQH 243 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 5/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 E+ ++G N +S E I + + ++ + + + D L++ Sbjct: 2 EEQNVIFGRNPVIEAIKSGKE-IEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSE 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 +G+ +H GV L V + Q + +L L+ ++PHNLG ++RS F Sbjct: 61 LAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAF 120 Query: 222 GVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV G+++ + + ++T+ G EH++ NI N + D ++ G +V T Sbjct: 121 GVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAE 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K + + + V+G E +G+ D VKI G + LN SVA +L+ + Sbjct: 181 KSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV 240 Query: 341 RQNK 344 + K Sbjct: 241 SKRK 244 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 11/321 (3%) Query: 31 RTGKGGGRP-GKSRADGGRRPARD-DKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 R+GK P G R G R + D DK S D + D P ++ G E Sbjct: 18 RSGKYASSPSGSKRTKFGTRKSFDPDKSSSKPDWQKGDRPRKSSDHL-GKSRVEGNRIRQ 76 Query: 89 ISGKSFIDPEVLRRQR-AEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALR 145 + +D +YG +A +A ++ ++ R W + F+ + Sbjct: 77 SFSRDHLDSRFESIDEDTSPDLIYGRHAVEAAIEA-GRSLNRLWVNAKLHYDSHFRPLIA 135 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLAL 202 AN V+ L++ + H G+ + ++ V QA + ++A Sbjct: 136 TAKANGSVVDEVENVRLSQMTQGASHQGIVAQVSAYEYVDLEVLVQQAKNKARRPVIVAA 195 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + ++PHNLG ++RS G +G+V+ A+ + + + G E++ N+ Sbjct: 196 DGITDPHNLGAIIRSAEAIGAQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVINLGRA 255 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 L+ + + + ++E + + T A +VLV+G E GL + ++ D V I+ +G Sbjct: 256 LEYLKSNSFWIYGLTAEAAQSIHTTDFSAPVVLVVGAEGSGLSLSVQNLCDQLVSIELSG 315 Query: 322 NVAGLNISVATGVLLGEWWRQ 342 LN SVATG+ L E +RQ Sbjct: 316 KTPSLNASVATGMALYEIYRQ 336 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 123/342 (35%), Gaps = 21/342 (6%) Query: 14 VMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVS 73 S SD + P K + + + + E + V Sbjct: 38 PKLKSSGQSSDPNSSRP----------KPQRKLSAQRTQRSAKVFSGAAGNEGYKGKKVI 87 Query: 74 RAPGDETPEKADHGGISGKSFIDPEVL-----RRQRAEETRVYGENACQALFQSRPEAIV 128 G E+ G G P + +YG + A +S + Sbjct: 88 EVSGTGRGEQNQTPGYRGGDRPAPGAPSHFTKESTDGDSDLIYGRHTLLAALESE-RQLN 146 Query: 129 RAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTV 186 R W + + PRF L A VD L + + H G+ + + + Sbjct: 147 RIWVVNQLRYDPRFHSLLLQAKAAGVVIDEVDYLRLDQITAHAKHQGIAAQVAPYSYLEL 206 Query: 187 QQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTA 243 + Q +LA + ++PHNLG ++R+ G +G+VV A+ + + A Sbjct: 207 DTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGAQGLVVPQRRAVGITSTVAKVA 266 Query: 244 EGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGL 303 G EH N+ L+ + AG+ + ++ KP++ +VLV+G E GL Sbjct: 267 AGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATAAKPIYSVEFSGPVVLVVGAEGTGL 326 Query: 304 PDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 A+ D V I G LN SVATG+ L E +RQ + Sbjct: 327 SLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQRSS 368 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 8/243 (3%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKA 165 + V+G NA + + + + + R +E L + +++ ++ + Sbjct: 2 KELVFGINAVSEALKG-QRRVYKIYAQRERQDKRLEEILTLAREKQLKLQYLEKKKMDEL 60 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ----DCVLALENESNPHNLGGMMRSCAHF 221 + H G+ +++ + Q + + AQ +L L+ +P NLG ++R+ Sbjct: 61 CEGK-HQGIIAEVERYPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRTAECA 119 Query: 222 GVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV G+++ E + R + G EH+ I +N+VN + +Q G+ V+ ++ Sbjct: 120 GVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGADAKAR 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + F TS+P+ LV+G E +G+ R+ D+ V+I G + LN SVA +L+ E Sbjct: 180 QSYFNTSIPSPTALVIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVL 239 Query: 341 RQN 343 RQ Sbjct: 240 RQR 242 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 6/245 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTK 164 +YG +A +A+ PE + A+ ++ R L + + + L Sbjct: 2 SNEFIYGIHAVRAVLDKEPERFIEAYVLKGRQDDRLMPILNELQMVGVSLQQMTRKTLDD 61 Query: 165 ASGTEHHGGVCFLIKK---RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + +H G+ +K N + +++ A +L L+ ++PHNLG +R+ Sbjct: 62 KAHGANHQGIIARVKPAKQLNENDLDDILAK-HASPLLLILDGVTDPHNLGACLRNADAA 120 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV V+V D + + + A G AE V + N+ + ++ G +V T+ E Sbjct: 121 GVAAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIVGTAGEAT 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 +++ L + +V+G E +G+ R+ D +KI G V+ LN+SVA+G+ L E Sbjct: 181 HDIYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAV 240 Query: 341 RQNKA 345 RQ A Sbjct: 241 RQRLA 245 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 112/301 (37%), Gaps = 10/301 (3%) Query: 48 RRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEE 107 + R+ + + K + ++ K + G + R E Sbjct: 3 SKLKRNISSGKFMEDKDKSVTESKGKAKSYNQVKNKNKKDNMVGNDKSTSAIEER----E 58 Query: 108 TRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 V G NA + I + + K + N+ VD+ +L Sbjct: 59 DIVIGRNAVIEALRGE-RTIEALYISNSKLEGSIKTIVGLAKENKILIKEVDKRKLDSMC 117 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 G E H GV + + V + + G ++ L+ +PHNLG ++R+ FGV Sbjct: 118 GGEVHQGVIAKVTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFGV 177 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+++ + S +++ G EHV+ N+ + +++ ++ G + + Sbjct: 178 HGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEEY 237 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 ++ +++G E G+ + D +KI G + LN SVA G+++ E + Sbjct: 238 SYQVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKG 297 Query: 343 N 343 Sbjct: 298 R 298 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 5/241 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + VYG NA L QS + RF++ + A + + VD+A L + + Sbjct: 3 DEIVYGRNAVWELLQSGKPVNKLLLQGEGTAGRFQDIVSHARAQKIPFQFVDKAALDRLT 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGV 223 H G+ + R V ++ AG + +L L+ +PHNLG ++R+ GV Sbjct: 63 EKAKHQGILAYVAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGV 122 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ ++ + +T+ G EHV N+V L D ++AG V +E G Sbjct: 123 HGVIIPKRRSVSLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAE-GTE 181 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 ++++ L V+V+G E +GL ++ D V + G + LN SVA +L+ E RQ Sbjct: 182 VYRSDLTGARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQ 241 Query: 343 N 343 Sbjct: 242 R 242 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 3/236 (1%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 ++G NA + +V + PR +E + A + +L K G Sbjct: 5 LFGLNAVFEAL-GQGRKVVALYVEAQRNPRLEEIVAQATERHVAVKQCERRQLDKMVGDV 63 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 H GV +K ++ ++ Q ++Q+ + L L+ ++PHN G ++RS A G +GV+ Sbjct: 64 RHQGVVAQVKAQDFVSLAQLLAQSSQSERFFLILDGITDPHNFGALIRSAAAAGCQGVIF 123 Query: 229 -QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 +D + +G +TA G +VQ N+ +++ ++AG V + E+G+ LF+ Sbjct: 124 AKDRSCPVTGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEGQSLFEAP 183 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L A + LV G E G+ R D + I G V LN+SVATG+ L E R + Sbjct: 184 LSAPIALVAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVRNH 239 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 6/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 ++ET+++G N QAL +S + W ++ R +E + A + + Sbjct: 2 SDETKIHGVNPVQALLES-GRPVSSLWVLKGRHGKRVEEMIEGFRARGVPIQFCERTAMD 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + + H GV R + + + Q ++ L+ +PHNLG +MRS F Sbjct: 61 RMADGGAHQGVIARCAPREAMSWDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEAF 120 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G V++ D + AI+ + G AE + I N+ ++ +Q V+ + E G Sbjct: 121 GALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEAG 180 Query: 281 KPLF-KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 PL + LV+G E GL R+ D I G V LN+SVATGV L E Sbjct: 181 APLIGTLDCKGPLALVMGNEGSGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYEV 240 Query: 340 WRQN 343 RQ Sbjct: 241 LRQR 244 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 112/237 (47%), Gaps = 6/237 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + +YG+N + ++ + + + + + + +VD++E K Sbjct: 5 KQYIYGKNTILEALKGDK-SVYTVYVQNNA--KDNGIIEQCKRKKIPFKIVDKSEFIKKL 61 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 G H GV I++ ++ + ++ G Q +L L+ +PHNLG ++R+C GV Sbjct: 62 GNVSHQGVMAEIEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIGVD 121 Query: 225 GVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GV++ ++ ++ +G + + G +HV+ N+ L+D ++ + VV ++ + Sbjct: 122 GVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDLDKSQDY 181 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + +V+V+G E G+ + D+ V + G+V LN SVAT V+L + + Sbjct: 182 RQVDYNMPLVIVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVY 238 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 5/240 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 RV+G +A +A P+ IV+AW R + + D L + + Sbjct: 6 RVWGIHAAEAALDYSPDKIVKAWLDDHRMQNRLQAVATRLDELGVEIVRADRKRLDRLAD 65 Query: 168 TEHHGGVCFLIK---KRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G+ + ++ + + A L L++ +PHNLG +R+C GVK Sbjct: 66 PRKHQGILLELDLPGEQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDAAGVK 125 Query: 225 G-VVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 G VV +D ++ + + A G AE V N+ LD F+Q GY VV + E + L Sbjct: 126 GLVVTKDQSVGLTPTVAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGAAGEAERTL 185 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++ L +V+V+G E GL R+ D ++I G V LN+SVATG++L E RQ Sbjct: 186 YELDLRLPLVVVMGAEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQR 245 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 64/252 (25%), Positives = 108/252 (42%), Gaps = 9/252 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAA-NRKAYHVVDEA 160 R + E+ ++G + AL +S P+ I + + + +++R +A + + + Sbjct: 2 RNQPEKEFIFGFHTITALLKSAPQKIDTLYCREDRQDKRVQSIRNLAKLHGIPIGTLSKV 61 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQW-------VSQAGAQDCVLALENESNPHNLGG 213 + + + H GV IKK + Q + +L L+ +PHNLG Sbjct: 62 QCNEIAPNAVHQGVFAKIKKTSRLNEQDLMIFLHHRLHNNLNPPFLLVLDGVQDPHNLGA 121 Query: 214 MMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 +RS GV V++ D A+ ++ +TA G AE T N+ L+ ++ G Sbjct: 122 CLRSANAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLFTVTNLATCLERLKKCGIWC 181 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + ++ L + LVLG E +GL + D V I G V LN+SVA Sbjct: 182 YGLDQSGTRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCDDLVAIPMVGTVGSLNVSVAA 241 Query: 333 GVLLGEWWRQNK 344 GV L E RQ + Sbjct: 242 GVGLFEVVRQRQ 253 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 107/272 (39%), Gaps = 6/272 (2%) Query: 77 GDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQ-S 135 G + +KA S + R + R+ G N+ ++ I + + Sbjct: 5 GKKDYKKAKTSQRSDVKLNGRKEERDGAKDLDRIEGRNSVLEAIKA-GRTINKILVPKGE 63 Query: 136 VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA-- 193 ++ + D + L K S T H GV + ++ V + A Sbjct: 64 KEGSIRQIIALARERGIVVQETDRSNLDKISTTHAHQGVIAYVAFKDYVEVDDILKIAQD 123 Query: 194 -GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQ 251 G ++ L+ ++ +NLG ++R+ G GVV+ + + A + + G E+V Sbjct: 124 KGEDPYIIILDGITDAYNLGSILRTADAVGAHGVVIPKRRAIGLNAAVSKASAGAIEYVP 183 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPN 311 NI ++ ++ +V T KP F+ L + LV+G E EG+ + Sbjct: 184 VARVTNISQTIEYLKKKNIWIVGTDLSGEKPFFEADLKGPVALVIGSEGEGMGRLVSEKC 243 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D V I G ++ LN +VA +++ E RQ Sbjct: 244 DFIVNIPMQGKISSLNAAVAAAIIMYEIRRQR 275 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 8/240 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELTKA 165 +YG+N + + ++R + +F S T R KE + +A +Y L K Sbjct: 1 MYIYGKNILKEIIEAR-YPVKHIFFSSSKTERGSLKEIVEDVANLGYSYSFSPNEVLEKM 59 Query: 166 SGTEHHGGVCFLI-KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 + T H G+ I + + + + ++ L+ +PHN G ++R+ GV Sbjct: 60 ALTNKHQGIVIDIGNDFKYENLD--IIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVD 117 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +++ D A+ + I+ + G + I N+ N ++ ++ V E GKP Sbjct: 118 AIIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVE-GKPY 176 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++ K+ LV G E G+ ++ D V I NV LN+SV++G++L E +Q Sbjct: 177 YEIDWQGKICLVFGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 3/253 (1%) Query: 94 FIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRK 152 D + E VYG NA L QS+PE++ + + + + P+ KE + + Sbjct: 3 RTDHAEIPAPEPREQVVYGRNAVIELLQSKPESVEKIYLQFNTSHPKLKEIVITARRLKI 62 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNL 211 +LT SGT + GVC L+ T+ + ++ + ++ L+ +PHN+ Sbjct: 63 PCGKARMEKLTLISGTAKNQGVCALLTSVTFYTLDEVLAAPRNSSPLLVILQGLEDPHNV 122 Query: 212 GGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++R+ V+ ++ S + + G H++ ++V LD + G+ Sbjct: 123 GAIIRTAEAVAADSVIMIEGKGAPISATVHKASAGALSHMRVCKVKSLVKTLDLLHERGF 182 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 ++V E VLV+G E +GL R D V+I G V LN+SV Sbjct: 183 SIVAADMEAEHNHTDIDWKRPTVLVMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSV 242 Query: 331 ATGVLLGEWWRQN 343 A GV+L E RQ Sbjct: 243 AAGVMLYEAMRQR 255 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 5/241 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTK 164 + +YG +A A + E ++ W R ++ A R L + Sbjct: 3 KESLYGIHAVSAALDA--EELLELWVAVERRADERIAPLVQKAAEQRLPVQEWRSVALGR 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 T+ H GV L++ G + ++Q +L L+ +PHNLG +RS GV Sbjct: 61 KLNTDRHQGVGGLLRAFPGQDFEAILAQLNGCGFLLVLDGVLDPHNLGACLRSAEAAGVD 120 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V++ D A + + + G A V T N+ L ++AG+ +V + E + L Sbjct: 121 AVILPRDNACPVNATVRKASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMAGEGSRSL 180 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L +V+V+G E +GL R+ D I G + LN+SVATG+ L E RQ Sbjct: 181 YALDLDMPLVMVMGGEEKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEAARQR 240 Query: 344 K 344 + Sbjct: 241 R 241 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 6/237 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 VYG+N +AL + + R KE + + + V ++ Sbjct: 5 VYGKNVVKALLA-DKKKVYEIILSDGF--RDKELEQEIRKRKIPCKVNSRKKMDTMFSGS 61 Query: 170 HHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H G+ I T+++ V+ G + L+ +PHNLG ++R+C GV GV+ Sbjct: 62 NHQGIAAKIDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVGVDGVI 121 Query: 228 V-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + + + + + G + V+ N+ L ++ G+ V + + + Sbjct: 122 IGKHRGVKLTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADFDNSQDYRQA 181 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 S +VLV+G E G+ + D V++ G+V+ LN SVA VLL + + Q Sbjct: 182 SYDMPLVLVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQR 238 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 9/244 (3%) Query: 106 EETRVYGENAC-QALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELT 163 E+T + G +A +A+ P I + + + + E L+ + V +++L Sbjct: 2 EDTVIVGRHAVREAIITGHP--INKILIQEGIKKQQINEILKNAKDQKIIVQTVPKSKLD 59 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAH 220 + H GV LI Q++ Q ++ VL L+ +PHNLG ++R+ Sbjct: 60 FLA-NAPHQGVAALIAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADA 118 Query: 221 FGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV GV++ ++ + + + G EHV I N+ +D+ + G+ V T + Sbjct: 119 TGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEANN 178 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + +V+G E +G+ D D +KI G+V LN SVA +++ E Sbjct: 179 ATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 340 WRQN 343 +R+ Sbjct: 239 FRKR 242 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 107/243 (44%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTK 164 E+ + G +A + S I + W + + + + L+ + V +++L Sbjct: 2 EDIVIVGRHAVKEAIVS-GHTINKIWIQEGIRKQQINDILQNAKEQKLIVQTVPKSKLDN 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAHF 221 + H GV LI Q++ ++ V+ L+ +PHNLG ++R+ Sbjct: 61 LA-NAPHQGVAALIAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADAS 119 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV GV++ ++ + + + G +HV + N+ +D+ ++ GY V ++ Sbjct: 120 GVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAEADNA 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + +V+G E +G+ +D D +KI G+V LN SVA +++ E + Sbjct: 180 TDYRDMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVY 239 Query: 341 RQN 343 R+ Sbjct: 240 RKR 242 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 5/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELT 163 + E ++YG ++ + + P + + ++ + R + ++ + AN +H+ + L Sbjct: 2 SSEKKIYGFHSITSQIRLDPLVVKEIFIDEARSDGRVNDLMKIIKANEVKFHLSTKDRLD 61 Query: 164 KASGTEHHGGVCFLIKK--RNGTTVQQWVSQAGAQDCV-LALENESNPHNLGGMMRSCAH 220 H GV L+++ TV+ + + + + L L+ +P NLG R Sbjct: 62 GMVSGNKHQGVVALVREAQNKYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVADA 121 Query: 221 FGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV ++ D A+ + + A GGAE V + N+ + + + V T Sbjct: 122 MGVDALICPKDNAVGLNATVRKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNA 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K L KT+ + LV+G E +G+ + D I G V LN+SVA+G+ L E Sbjct: 182 NKSLQKTNFKGSIALVMGSEGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEI 241 Query: 340 WRQN 343 RQ Sbjct: 242 NRQR 245 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 6/241 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG +A + + P+ IV+ + ++ R + + A ++ EL S Sbjct: 7 IYGIHAVSGVLDAAPQRIVKLYVQENRDDQRLQSLVEKAKALGVKVILLSRTELNTLS-N 65 Query: 169 EHHGGVCFLIKKRNGTT---VQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 E H G+ ++ + + + +L L+ +PHNLG +RS FGV+ Sbjct: 66 EKHQGIVADCEEVENLDESALLSLLKKRETPALLLILDGVKDPHNLGACLRSANAFGVRA 125 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 V+ D A+ + + A G AE I N+ +D ++ G +V T+ E + Sbjct: 126 VIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETLIQ 185 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + L + +VLG E GL ++ D +I G+V LN+SVA G+ L E RQ + Sbjct: 186 EIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQRE 245 Query: 345 A 345 A Sbjct: 246 A 246 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 80/327 (24%), Positives = 128/327 (39%), Gaps = 18/327 (5%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 NPR KG P K GR+ A + K P K ED P+ R+ A G Sbjct: 4 NPRAAKGKKGPSKGTGGLGRK-ALEGKGPTP---KAEDRPYHKAFRSKELSERSAAKRPG 59 Query: 89 ISGKSFIDPEVLRRQRAEETRVYGENACQALFQSR-PEAIVRAWFIQSVTPRFKEALRWM 147 S S + RR R E V G N+ ++ P + V R KE L+ Sbjct: 60 SSSPSLQRTQ--RRGRPSEEMVTGRNSVVEALRAGIPAKALYIAVRIEVDDRVKEVLKLA 117 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ---------AGAQDC 198 + + EL + + H G+ I + + Sbjct: 118 SERGIPLMETHKPELDRMTDDAVHQGLALQIPPYDYPDAIDIAQETVDKFKKGYIKNSPL 177 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDN 257 ++AL+ ++P NLG ++RS + F + V+V + + + +A +T+ G A V N Sbjct: 178 IVALDGITDPRNLGAIIRSVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPVARAGN 237 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVK 316 + L+ F+ GY V+ + L ++ + +V+G E +GL R+ D V Sbjct: 238 LNRALESFKGMGYFVLGLDGDGDVSLPALAVAKEPVCIVVGSEGKGLSRLVRENCDQIVS 297 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQN 343 I + LN S+A G+ L E RQ Sbjct: 298 IPIDSAMESLNASMAVGITLYEIARQR 324 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 267 bits (682), Expect = 5e-70, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 6/243 (2%) Query: 103 QRAEETRVYGENACQALFQ-SRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEA 160 V+G +A + E I + + + V F +E R+ V + Sbjct: 8 SSTNNDFVFGRHAGIDFLKTQDSEKINKVFLAEGVQEDFAREVYRYAKKKHLIIQRVPKN 67 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ--DCVLALENESNPHNLGGMMRSC 218 +L K +G E+H G+ + Q + + + +L L+N +PHNLG ++RS Sbjct: 68 KLDKLTGGENHQGLVLAVASFEYADFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSA 127 Query: 219 AHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 GV GV++ A + +T+ G +HV +N+V + GY + T+ Sbjct: 128 DATGVSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAM 187 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 E G K + K VLV+G E +G+ D + I G+V LN SVATGVLL Sbjct: 188 E-GDDYRKWNANGKTVLVIGNEGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLY 246 Query: 338 EWW 340 + + Sbjct: 247 QAF 249 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 6/237 (2%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELTKASGTEH 170 G N + + + + F K+ + VD+ + K + Sbjct: 6 GRNPVMEALEMD-MGVTNIYIQKGELKGFIKKIEKKAYDMGIRVEYVDKKYIEKFAENTA 64 Query: 171 HGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV + ++V + + + ++ L+ ++PHNLG ++R+ G GV+ Sbjct: 65 HQGVMAKMPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVAGCHGVI 124 Query: 228 VQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + E + AI+T+ G +++ NI ++ ++ + E + + Sbjct: 125 IPKHRACEVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWIYGACGEASQTHTQA 184 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +L + LV+G E +G+ R+ D +KI G LN S A +L+ E RQ Sbjct: 185 NLKGPIGLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQR 241 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 101/239 (42%), Gaps = 6/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASGT 168 + G+N + S I + + + E + VD++++ K S T Sbjct: 4 IEGKNPVKEALNS-STQITEVYISNTTKDKSISEIINLCKQKGIVVKFVDKSKIDKMSKT 62 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 ++ GV + ++ + + +A G + ++ L+ ++PHN G ++RS G G Sbjct: 63 KNPQGVIAIAQEYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHG 122 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 ++ + + + + + G EH++ N+ +D ++ G V + K ++ Sbjct: 123 IITEARNSCPITPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAEKFVY 182 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + +++G E +G+ ++ D VKI G + N SVA G++ E +Q Sbjct: 183 DCDFKIPICIIIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQR 241 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 21/293 (7%) Query: 69 WRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR---QRAEETRVYGENACQALFQSRPE 125 PG G+ K E +R + E + V+G + L + RP Sbjct: 4 RGAAGALPGSGPLRPRLKPGMKKKVVSRKESGQRWPADQPEASLVWGIHPVTELLRRRPG 63 Query: 126 AIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT 184 + + + R + A++R +D A L A+ H GV + + Sbjct: 64 LVRKLYLAGGRDDGRVAAIVELAASHRIP---LDRAGLPPAAAELPHQGVAARVAPPSPL 120 Query: 185 TVQQWVSQ-------------AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-D 230 ++ + + + AG +L L++ +PHNLG ++RS A FGV GV++ D Sbjct: 121 SLAELLQRLPALGPAPASSPAAGPPPLLLVLDSLQDPHNLGAVLRSAAAFGVDGVILPKD 180 Query: 231 AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA 290 + SG ++ A G A + N+ L ++ G+ + S E L++T Sbjct: 181 RSAPLSGTVLKAAAGTAALLDICRTTNLAGALGTLKKHGFWIYGASGEASGNLYETDFTG 240 Query: 291 KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 LVLG E +G+ + D + I V LN+SVA G++L E R+ Sbjct: 241 PTCLVLGNEQKGIRPLLKKHCDFLLAIPLAAGVESLNVSVAAGIMLAEIRRRQ 293 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 6/241 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 E V+G N + + + E I + + R + L + +LT+ Sbjct: 2 REELVFGVNPVREALRGKRE-IFGLYVQSTATDHRLDKILELARERGVRVIRREREDLTR 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 G+ HH G+ + + + + + A +L L+ +PHNLG ++R+ A Sbjct: 61 MCGSSHHQGMALKVAPFSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAACA 120 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G GVV+ D A + AA + + G E + NI L+ +++GY V S E Sbjct: 121 GASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEAD 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 L++ + K+ LV+G E EG+ R D V I G V LN SVA G+ L E Sbjct: 181 ASLYEVAFSGKIALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVA 240 Query: 341 R 341 R Sbjct: 241 R 241 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 7/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 V G+NA +S + + W ++ + ++ + V +L + Sbjct: 6 DYVIGKNAVIETLKSD-RKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMV 64 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 + H GV + + + Q L L+ +PHNLG +MR+ G Sbjct: 65 TGQ-HQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGA 123 Query: 224 KGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+V+ + + + + G EH+ N+ L++ ++ G VV T + + Sbjct: 124 HGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARED 183 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + LV+G E +G+ ++ D +K+ G V LN SVA G+L+ E +R+ Sbjct: 184 FRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRK 243 Query: 343 N 343 Sbjct: 244 R 244 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 12/275 (4%) Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEE------TRVYGENACQALFQSRPEAIVRAWFIQ 134 E++ GG G+ + R R E VYG N A ++RP+ + R + ++ Sbjct: 2 RERSSKGGRGGERASEEVPQRASRGERGGGEASRFVYGVNPVLAALRARPDEVERLFLVE 61 Query: 135 SV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ 192 E L V L + H GV ++ ++ + Sbjct: 62 GQLGARAAGELLSRAREFGIRVEKVTRERLGTLAEGGVHQGVVVELRGFKYAELEDLLEA 121 Query: 193 A---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAE 248 A G V+ L+ +PHNLG ++RS G GVV+ +D A+ +G + + G E Sbjct: 122 AKALGQPPLVVVLDGIQDPHNLGAIIRSADALGAHGVVIAKDRAVQVTGTVAKASAGAVE 181 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 H + NI L++ ++AG V + +P++ L + LV+G E G+ D Sbjct: 182 HSRIARVVNISRALEELKEAGLWVAAADVDAKEPMWSARLDGPLALVVGAEGAGVRDGVL 241 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D R++I G V LN SV+ G+LL E RQ Sbjct: 242 KHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQR 276 >UniRef50_P44703 Uncharacterized tRNA/rRNA methyltransferase HI0424 n=30 Tax=Pasteurellaceae RepID=Y424_HAEIN Length = 351 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 123/346 (35%), Positives = 191/346 (55%), Gaps = 32/346 (9%) Query: 21 DDSDKRTHNPRTG-KGGGRPGKSRADGGRR--PARDDKQSQPRDR---KWEDSPWRTVSR 74 + K G K +P ++R + R++K PRD+ K ++SR Sbjct: 10 QSAGKTFQERSVGEKYREKPTQNRPHFNDKFNGNRNEKSRFPRDKQEVKETRITQLSLSR 69 Query: 75 APGDETPEKAD------------------HGGISGKSFIDPEVLRRQRAEETRVYGENAC 116 AP ++ E+ G +S ++ PE +++ RAEE +VYGENAC Sbjct: 70 APSNKNAEQPKVQVTIKSTGTVYKTKEKKTGALSPRA---PEKIKKNRAEEMKVYGENAC 126 Query: 117 QALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCF 176 ALF RPE+IVR W ++ + E L ++A N+KAYHVVD EL + SGTEHHGG+C Sbjct: 127 LALFAERPESIVRLWATVQMSHKIGEVLSYLAENKKAYHVVDSEELARVSGTEHHGGICL 186 Query: 177 LIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLES 236 L+KK T+Q ++ +DC++ L+N +N N+GG++R+CA+FGVK +V + L S Sbjct: 187 LVKKPRAFTLQGYLDIPRNEDCLVLLDNVNNAQNIGGVLRTCAYFGVKNIVADNVENLYS 246 Query: 237 GAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS-SEQGKPLFKTSLPAKMVLV 295 A++R AEGGAE+++ + D I + L R++GY ++ S ++QG PL K L K+V V Sbjct: 247 AASMRVAEGGAEYIRVLEADYIDSALMQLRKSGYQIIHVSHNKQGDPLDKVRLKNKVVFV 306 Query: 296 LGQEYEGLPDAARDPNDLRVKIDGTGNVAG-LNISVATGVLLGEWW 340 L E ++ P D + ++ + LNI+V GVLL +W+ Sbjct: 307 L-SESS--TESLATPEDTQARLTLASPIKSGLNIAVNAGVLLAKWY 349 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 70/336 (20%), Positives = 130/336 (38%), Gaps = 11/336 (3%) Query: 15 MYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARD-DKQSQPRDRKWEDSPWRTVS 73 + R +S R + + + R+ D Q R ++ + Sbjct: 82 RFERKSTNSSYRNQDSQETNNYRGSNRFERKSTNSSYRNQDSQETNNYRGSNRFERKSTN 141 Query: 74 RA--PGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAW 131 A + + + + E + ++ ++G ++ +A AI R W Sbjct: 142 PAYRNKNSQRASSYKREENNEPLSYSESFSKTLSD-DLIWGRHSTEAALVG-GRAIHRIW 199 Query: 132 FIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQW 189 + TP+F + L+ A+ V + L + + H G+ I ++ Sbjct: 200 CTSELRSTPKFFQLLKDQKASGVLVEEVSWSRLGQLTNGAVHQGIVLQIAASKTLDLKNL 259 Query: 190 VSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEG 245 + G +LAL+ ++P NLG ++RS G +G+++ + +G+ + A G Sbjct: 260 IDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAG 319 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 EH+ N+ L+ + GYTVV + E L + +V+V+G E +G+ Sbjct: 320 ALEHLPVARVVNLNRSLEKLKDEGYTVVGLAEEGSSTLSEIKFQGPLVVVVGSEDKGISL 379 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 R D V+I G LN SVAT + L E R Sbjct: 380 ITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVAR 415 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 9/249 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR---FKEALRWMAANRKAYHVVD 158 ++ EE V G NA L + P + + V R + R VD Sbjct: 7 KRDLEEGLVLGRNAVIELLKG-PREVECIYICDDVPARGQPISRIVALAKEARVPVKRVD 65 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMM 215 L + +H GV + TV++ ++A G ++ ++ +PHNLG ++ Sbjct: 66 VRRLDTLANGLNHQGVAAQAAAFHYCTVEELFARAAARGEPPLLVIADSIEDPHNLGAII 125 Query: 216 RSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ G G+++ A + RT+ G EH+ N+V+ + + + G + Sbjct: 126 RTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVARVTNLVSTIKELKARGVWIYG 185 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + + +T L LV+G E GL R+ D + + G V LN SVA G+ Sbjct: 186 ADASGAR-WDQTDLTGPSALVIGSEGFGLSRLVRETCDALLSLPMRGEVNSLNASVAAGI 244 Query: 335 LLGEWWRQN 343 L+ E RQ Sbjct: 245 LMYEAVRQR 253 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 7/242 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK-EALRWMAANRKAYHVVDEAELTKA 165 ++ V G+N + + R + + F+ E L+ + V L K Sbjct: 4 DSLVPGKNPVVEAIRGN-RKVFRIYISKDSNKNFQDEMLKLAQQHNINLDKVPLDRLDKM 62 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVS----QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 T H G+ + + + + +L L++ ++P N G ++R+ Sbjct: 63 VPTTEHQGIVAETEPFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAV 122 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV GV++ ++ + ++ + G AEHV I N+ + ++ ++ T + Sbjct: 123 GVDGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGD 182 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + +F+ + + LV+G E G+ + D I G V LN SVAT V+L E + Sbjct: 183 RGIFEENYNIPLALVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIY 242 Query: 341 RQ 342 RQ Sbjct: 243 RQ 244 >UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonadaceae RepID=Q3BPZ8_XANC5 Length = 390 Score = 263 bits (674), Expect = 4e-69, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 18/310 (5%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDD-KQSQPRDRKWEDSPWRTVSRAPGDETPEKADHG 87 +P + GR G+ DGG P+ + ++ PR +P RAP T Sbjct: 83 DPTMTQHDGRGGRPPRDGGSGPSHNPWGRAAPRT----PAPRSAAPRAPAQHT------- 131 Query: 88 GISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 + P A E R+YG NA QA+F++RP+A+ + + ++ P+FK L W Sbjct: 132 ----SAVTPPAAAASGNAREVRLYGINAVQAVFKARPQALRKLYLSEARIPQFKALLAWC 187 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV-LALENES 206 R Y VVDEA+L+K + + HH G+ + + +Q+W++ + L L+ Sbjct: 188 VTQRIGYRVVDEADLSKLAASAHHEGIVAEVLRVAPQPLQEWLAALPQGPVLALWLDGVG 247 Query: 207 NPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDF 265 NPHN G ++RS AHFGV G+++ + L SGAA R AEGGAE V + + + Sbjct: 248 NPHNFGAILRSSAHFGVAGLLLPAGSTLGLSGAAARVAEGGAEAVPLVQLPDTATAMAQL 307 Query: 266 RQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325 RQAG+ + T + G+ +F +LP ++V V+G E EG+ A DL++ I G+G V Sbjct: 308 RQAGFAIAATLVDGGQDVFAAALPQRLVYVMGAESEGMDRAFARDCDLQLSIRGSGKVES 367 Query: 326 LNISVATGVL 335 LN++ AT V Sbjct: 368 LNVASATAVF 377 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 8/246 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-----RFKEALRWMAANRKAYHVVDEAEL 162 +YG + + ++ + + + + + + +L Sbjct: 2 DVLYGLHPVEEALRAGSRKFDHVCVSRERQDHGAAQKLQRIVDLCRSEGVRLRFENREQL 61 Query: 163 TKASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSCAH 220 T+ + T H GV ++++R+ T++ ++ G +LAL+ +P NLG ++RS Sbjct: 62 TRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADG 121 Query: 221 FGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV GV++ + + S A++T+ G AEH++ N+V L+ ++ V Sbjct: 122 AGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLDERG 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 V+VLG+E EGL D R D V+I G V+ LN+S A V+L E Sbjct: 182 TMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEA 241 Query: 340 WRQNKA 345 RQ + Sbjct: 242 ARQRRV 247 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 7/246 (2%) Query: 103 QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAE 161 ++ E + G NA F+S + + + + + +R + + V++ Sbjct: 20 KKENENIIEGRNAVMEAFRSGK-PVDKLYVLDGCQDGAVRSIIREARKHDTILNFVEKDR 78 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSC 218 L + S T H GV + V+ + + G ++ L+N +PHNLG ++R+ Sbjct: 79 LNQLSETGKHQGVIASVAAYEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTA 138 Query: 219 AHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 G GV++ + + RT+ G + N+V ++D ++ G V Sbjct: 139 NQAGAHGVIIPKRRAVGLTATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADM 198 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + ++ ++ + LV+G E EG+ +D D +I G++ LN SVA GVL Sbjct: 199 DGDV-MYDVNMKGPIGLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAY 257 Query: 338 EWWRQN 343 E RQ Sbjct: 258 EIVRQR 263 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 107/278 (38%), Gaps = 8/278 (2%) Query: 69 WRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIV 128 + + E D + F RR+ E + G N+ R + Sbjct: 9 DKKERKCDPHEKRRSGDQSIRGERGFSSG--GRRKEEETCFIGGRNSVLESL--RAGQVK 64 Query: 129 RAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQ 187 + + R A +E L + + H GV +K ++ Sbjct: 65 KVFIKSGKKDGRLLALAEEAERLGVAAIETEERTLDRLTEGVRHQGVAASLKPYAYADLE 124 Query: 188 QWVSQ-AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEG 245 + +S ++ L+ + N+G ++R+ G V++ + + AA++TA G Sbjct: 125 EVLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPVTAAAMKTASG 184 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 ++ NI L+ ++ G+ V + G L++ L +V+V+G E +G+ Sbjct: 185 AFAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGG-DLYQADLKGPLVIVMGAEGKGISP 243 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + D V+I G V+ LN+SVA +L+ E RQ Sbjct: 244 LTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQR 281 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 106/241 (43%), Gaps = 7/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK-AYHVVDEAELTKAS 166 VYG +A Q+ + + + + + + ++ +A +K A + L++ + Sbjct: 20 DIVYGVHAVTESLQAN--TGNKLYIQEDLRGKKVDNIKSLATQKKVAISWTPKKTLSQMT 77 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWV--SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G + T V + + ++ A +L L+ ++PHNLG ++R+ V Sbjct: 78 DGAVHQGFVLRVSAFAYTDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNVC 137 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GV++ ++ + +T+ G EH+ N+ LD + G+ + T G P Sbjct: 138 GVIIPKHRSVGVTPVVSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDM-NGTPS 196 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + K+ LV+G E +G+ + D + I G+V LN SVA +L+ E +R Sbjct: 197 DCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNR 256 Query: 344 K 344 + Sbjct: 257 R 257 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 5/249 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDE 159 ++ +YG + A + + + R ++AL+ + + + Sbjct: 2 KRPDRSETLYGIHPVMAAITAGRRKVDTLFIASGRETRQPHQQALQAAEQHNIPVNEIPA 61 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRS 217 +L + +G + H G+ + + ++ + +L + ++PHNLG + R+ Sbjct: 62 RDLEQMTGGKVHQGIAARVSVYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALART 121 Query: 218 CAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 GV G+++ D A + AA++ + G E + NI VLD + AG + Sbjct: 122 ALCAGVHGLIIPKDNAASPTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLD 181 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + ++ + L + LV+G E G+ D + I T V LN SVA V + Sbjct: 182 GRGEQTIYDSDLTGPLALVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAM 241 Query: 337 GEWWRQNKA 345 E +RQ +A Sbjct: 242 YEAFRQRRA 250 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 4/241 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEAL-RWMAANRKAYHVVDEAELT 163 A + +G N L + RPE + + + F++ + R A R V+ EL Sbjct: 19 ASDDLCWGRNPVLTLLEHRPELCRKVFLLAGAQDEFRDTVARLCADGRIPLDFVEREELE 78 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + SG H GV + + V A ++ L++ +PHNLG ++R+ Sbjct: 79 RLSGGAVHQGVAARVAPIPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVA 138 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G VV Q D + +G ++T+ G A + N+ ++ ++ G+ VV Sbjct: 139 GAACVVCQNDRSATVNGTVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTD 198 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + ++ ++LP ++ LV+G E EG+ D+ VK G LN SVA + + EW Sbjct: 199 ETVWSSALPERLALVVGSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWV 258 Query: 341 R 341 R Sbjct: 259 R 259 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 109/242 (45%), Gaps = 8/242 (3%) Query: 108 TRVYGENACQALFQSRPEA--IVRAWFI--QSVTPRFKEALRWMAANRKAYHVVDEAELT 163 ++G N + + + P+ I + F ++V +E A VV +L Sbjct: 1 MYLHGRNVLREILKLEPKKLKIKKVLFTDQKNVDRELEELKEHTAKKGYRMEVVPPEKLF 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQ--AGAQDCVLALENESNPHNLGGMMRSCAHF 221 S + H GV +K+ T+++ + + + ++ L+ +PHNLG ++RS Sbjct: 61 NLSREKKHQGVVINLKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAA 120 Query: 222 GVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G GV++ + A +E + A ++ + G + + N+ ++ ++ G+ + E G Sbjct: 121 GADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATME-G 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 +P + S K L+ G E +G+ + +D V I + LN++ + ++L E+ Sbjct: 180 EPYYSVSFTDKAALIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYR 239 Query: 341 RQ 342 RQ Sbjct: 240 RQ 241 >UniRef50_Q0I1J4 tRNA/rRNA methyltransferase n=2 Tax=Histophilus somni RepID=Q0I1J4_HAES1 Length = 364 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 109/334 (32%), Positives = 169/334 (50%), Gaps = 18/334 (5%) Query: 19 SDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPAR-----DDKQSQPRDRKWEDSPWRTVS 73 ++ + + T K S+ R +R + + P T Sbjct: 32 AERFVSNKRYEKSTSKSPHVDNNSKRALSNRHSRPQNTQNTASHTHIINTTMEKPNGTGQ 91 Query: 74 RAPGDETPE-----KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIV 128 + + G +S ++ PE +++ RAEE +VYGENAC +LF RPE+IV Sbjct: 92 VQVVLKRSSLVAKTEKKTGPLSPRA---PEKIKKNRAEEMKVYGENACLSLFAQRPESIV 148 Query: 129 RAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQ 188 R W + + + ++A+N+K YHVVD +EL SGTEHHGG+C L+KKR T+ Sbjct: 149 RVWTTVEMAHKVGDLFSYLASNKKVYHVVDNSELALVSGTEHHGGICMLVKKRRPFTLHG 208 Query: 189 WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAE 248 ++ ++C+L L N HN+GG++R+C +G+ VV+ D LL S A+R AEGG E Sbjct: 209 YLDIPHQKNCLLVLNGVRNAHNIGGIIRTCVCYGISAVVIDDVELLHSAVAMRVAEGGME 268 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-GKPLFKTSLPAKMVLVLGQEYEGLPDAA 307 ++ P+ D L RQAGY +V SS + K + + L K+ VL E + ++ Sbjct: 269 YIHPLEIDRTETALVKLRQAGYQIVHLSSNKHAKTIKQLQLNDKVAFVL-SEAD--TESL 325 Query: 308 RDPNDLRVKIDGTGNV-AGLNISVATGVLLGEWW 340 D D + + + GLN+SVATG+LL +W Sbjct: 326 ADKADELINLSLVNPLKHGLNVSVATGILLAKWT 359 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 14/319 (4%) Query: 37 GRPGKSRADGGRRPARDDKQSQPR--DRKWEDSPWRTVSRAPGDE-TPEKADHGGISGKS 93 G + R DG + A + + R +K + ++ + + D + S Sbjct: 113 GNTSRLRRDGPKGKATREMITSNRIFSKKIGRTIGKSEKNYHVRSFSNKSQDLDTSTYFS 172 Query: 94 FIDPE----VLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWM 147 FI+ + + E+ ++G ++ QA +S I R W V + +F + L+ + Sbjct: 173 FINDSNYDSLEKSSETEKDLIWGRHSTQAALES-GRPIHRIWCTSEVKSSSKFLQLLKKV 231 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ---AGAQDCVLALEN 204 A+ V A L + G H G+ + + + + G ++A+E Sbjct: 232 KASSVLVEEVSWARLGQLIGGSGHQGIALQMAAVETLDLTKLIEDCCHLGENPLLMAVEG 291 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 ++PHNLG ++RS G G+++ +G+ + A G EH+ N+ LD Sbjct: 292 LTDPHNLGAIVRSAEALGAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRSLD 351 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 + GY +V ++E L + L +V+V G E GL R D ++I G Sbjct: 352 ILKDKGYRIVGLATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRIPLRGAT 411 Query: 324 AGLNISVATGVLLGEWWRQ 342 LN SVA+ ++L E R+ Sbjct: 412 PSLNASVASALMLYEVARR 430 >UniRef50_B8F579 rRNA methyltransferase n=5 Tax=Pasteurellaceae RepID=B8F579_HAEPS Length = 335 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 96/268 (35%), Positives = 157/268 (58%), Gaps = 8/268 (2%) Query: 78 DETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT 137 P K+ G +S ++ PE +R RA E +VYGE+AC A+FQ RPEAIVR W Sbjct: 72 RNKPIKSKSGALSPRA---PEKIRNNRASEMKVYGEHACSAIFQQRPEAIVRLWITSECA 128 Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + L ++A ++KAYH+VD E+ + +GTEHHGG+C L+KK +++ ++ D Sbjct: 129 KKTGALLSYLADHKKAYHLVDTEEMLRVTGTEHHGGMCLLVKKSTPFSLEGYLQLERQHD 188 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDN 257 C++ L+ +N N+GG++R+CA +G+KG++V++ +L S A R AEGG E V P+ + Sbjct: 189 CLILLDGVNNAQNIGGIIRTCAFYGIKGIIVENNDILNSSNAARVAEGGLEFVYPLETKH 248 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKP-LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 L R+AGY +V + ++ P L + L K+V VL E + + P D V+ Sbjct: 249 KHIALMQLRKAGYQIVHLTRQRQAPHLSRIVLSKKIVFVL---SEVISNEVEYPEDSIVQ 305 Query: 317 IDGTGNVAG-LNISVATGVLLGEWWRQN 343 + ++ LN++V G+LL +W++ + Sbjct: 306 LSFANSLNSGLNVAVNAGILLAQWYQNH 333 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 8/265 (3%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 + K G++ R+ ++ +G NA ++ ++ P A + + + Sbjct: 5 KDKRKVRSDRSKGRTTSS-----RRSEDKDLCWGRNAVISMLETVPSACKKIYLATGIQT 59 Query: 139 RFKE-ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 F++ L N + + L + +G E H G+ I + Q+ + G Sbjct: 60 TFRDDLLSLAGKNAVEVTEANGSYLDEITGGEKHQGIVANIDLPKPRDLSQFSPKKG-PS 118 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGD 256 +LA+++ +PHN G M+R+ G GV+ + +G I+T+ G A V Sbjct: 119 LLLAMDHVKDPHNFGAMIRTAEAVGALGVIYPSRRSVGVTGTVIKTSAGAAFRVPLYEVT 178 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N+V ++ ++ GY VV E+ + ++ + LP K+VL++G E EGL + + D + Sbjct: 179 NLVRSMEILKKEGYWVVGLDHEEPRDIWSSPLPDKLVLMVGSEGEGLSRLSSERCDDLRR 238 Query: 317 IDGTGNVAGLNISVATGVLLGEWWR 341 I G LN SVA + + EW R Sbjct: 239 IPMVGKTGSLNASVAAALGMFEWRR 263 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTK 164 E+ + G +A + S AI + + + + L+ + + V +++L Sbjct: 2 EDIVIVGRHAVKEAIIS-GHAINKILIQDGIKKQQINDILKNAKSQKLIVQTVPKSKLDF 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHF 221 + H GV L+ +++ + + V+ L+ +PHNLG ++R+ Sbjct: 61 LA-NAPHQGVAALVAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADAS 119 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV V++ ++ + + + G +HV I N+ +D+ + G+ + T + Sbjct: 120 GVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEANNA 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + +V+G E +G+ D D +KI G+V LN SVA +++ E + Sbjct: 180 TDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVY 239 Query: 341 RQN 343 R+ Sbjct: 240 RKR 242 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 8/237 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++YG S I +A+ I+ + +E + + + VD+ K Sbjct: 7 DKIYGRKPVIDAIDS-GVKIYKAFVIKQNSKIVEEIIAKLNKANVEINFVDKRFFDKI-- 63 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H GV + ++ ++ L+ +PHNLG ++RS FG GV+ Sbjct: 64 ELNHQGVMVEAESFEYKDLRDLDKYQR----LIILDQIEDPHNLGAIIRSAESFGFDGVI 119 Query: 228 VQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + + S +T+ G ++ I N +++ ++AG+ V + E P+ + Sbjct: 120 IPERRSASVSPIVYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEASSPIDQV 179 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L K+ L++G E +GL R+ D+ + I G V LN SVA+ + + E RQN Sbjct: 180 DLKGKVCLIVGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQN 236 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 105/241 (43%), Gaps = 5/241 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTK 164 E ++YG+NA +S + + + + + +F E L V+ + + K Sbjct: 2 EDKIYGKNAVLEALKSNI-PLNKIYIAKGIHFDNKFNEILNLAKEKGVPIKYVERSVIEK 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 G + GV +I + + ++ L++ +PHNLG + R+ G Sbjct: 61 MVGG-NSQGVLAIISSVPYREWEDIEKTLNNKSVIVVLDHIQDPHNLGAIARTSEFAGAS 119 Query: 225 GVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +V+ + + A+ + + G ++ + NI N L + ++ G+ +V + Sbjct: 120 AIVIPKARSAGVTSASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTENLY 179 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + + LV+G E EGL ++ DL VKI G V LN+SVA G++L + + Sbjct: 180 NQVNYRFPLALVVGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIILYKIRESH 239 Query: 344 K 344 + Sbjct: 240 E 240 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 5/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT 163 ++ + +A QA +S P ++ + + R + + +L Sbjct: 2 SKSIIITSFHAVQAQLKSNPTCFIKVFILNKRCDKRLNTLTSEFNNFGISVQRCTKIQLD 61 Query: 164 KASGTEHHGGVCFLI---KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 K S + H GV I + + +VS+ +L L++ +P NLG +RS Sbjct: 62 KLSNHQTHQGVAAEILLPTLPDQGELISYVSKLDNAGFILILDSIQDPRNLGACLRSANA 121 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV VV+ ++ + + +T+ G ++ N+ + +Q V+ Sbjct: 122 AGVHCVVINKNGSAPINSLVHKTSAGALNQLKIFQVTNLSRTIKALQQKNIWVIGLDGSV 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +++ L +++G E GL + D KI G V LN+SVATGV L E Sbjct: 182 NISIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQLAKIPMQGKVESLNVSVATGVTLFEV 241 Query: 340 WRQN 343 RQ Sbjct: 242 NRQR 245 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 9/237 (3%) Query: 108 TRVYGENACQALF-QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 VYG N + + + P + +F S + + + + Y + + L K Sbjct: 1 MIVYGRNVLKEILTSNHPVKL--IYFSDSHDKELDKLIEQVKERKLPYTIAPKNVLKKLC 58 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 G E + GV I ++ L+ +P NLG ++R+ GV V Sbjct: 59 GEEKNQGVVIDIGDFQYADESYL----PENPFIVLLDQVQDPQNLGAIVRTAVAAGVNMV 114 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 V+ +D + + +I+ + G + + N+ ++ + G + +GKPL++ Sbjct: 115 VLTKDNSAHVTPGSIKASAGTIFRIPIVITVNLARYIEKLKDKGVWIYGADM-RGKPLWE 173 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 L + +V G E G+ ++ D V I + LN+SV+ G+L+ E R+ Sbjct: 174 VKLERPLGIVFGNEGSGIRQLVKESCDELVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 5/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANR-KAYHVVDEAELTKAS 166 +YG N + S E + R + + +R +A R + + + L + Sbjct: 2 EVIYGVNPLREALISGGEGVTRIVVARGRSESSISEIRTLAKQRGIPVEIRERSFLDDLA 61 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGV 223 G H GV + + ++ D VL L+ +PHNLG ++RS FG Sbjct: 62 GHASHQGVLGVCTAYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGA 121 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+++ + A +G I+T+ G A H+ N+ LD+ + G+ + + + Sbjct: 122 NGIILPERRAASVTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARADQS 181 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + + LV+G E +GL R D + I G + LN+SV+ G++L E R+ Sbjct: 182 VSDPDYQGAVGLVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRK 241 Query: 343 N 343 N Sbjct: 242 N 242 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 8/243 (3%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTK 164 ++ ++YG +A + + P I F + V R + + AY + ++ K Sbjct: 2 KQQQLYGIHAIEKFLKQSPHLIYSLTFQKGPVNKRVQSLMDQAKRMGIAYQLEPKSFFNK 61 Query: 165 ASGTEHHGGVCFLIKK---RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 G H GV + K N T ++ + +A + L L+ +PHNLG ++R+ Sbjct: 62 LEG--VHQGVVATVAKEADLNETDLKALL-EAESNPLFLFLDEVQDPHNLGAILRTADAT 118 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV VV+ ++ + + A G AE V+ + N+V + + +QAG V + E Sbjct: 119 GVTAVVIPKHNSVGVNATVRKVACGAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETN 178 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 L++ + LV+G E GL R+ D I G++ LN+SVATGV+L E + Sbjct: 179 TTLYQLDFKGAVGLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVY 238 Query: 341 RQN 343 RQ Sbjct: 239 RQR 241 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 8/255 (3%) Query: 93 SFIDPEVLRRQRAEE--TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAAN 150 S D R + EE V G +A A +S + + W + + + + Sbjct: 4 SMRDGARRRSAQGEEAADLVKGRHAVLAALESE-RPVNKVWVAEGASGM-DAIVAKARSR 61 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPH 209 V + L + + H GV + + + + G V+ L+ ++PH Sbjct: 62 GVVVQFVPRSRLDEMASA--HQGVIAQVAPYAYVDLDDVIRRDTGFAPLVVVLDEIADPH 119 Query: 210 NLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA 268 N G ++R+ G +GVV+ + + A G E + N+ L +QA Sbjct: 120 NFGAILRTAEASGAQGVVIGKRRQAQVTDVVAKAAAGALETLPVARVANVAQALQRLKQA 179 Query: 269 GYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 GY +V E P + +V+G E +G+ R+ D V I G V LN Sbjct: 180 GYWIVGADVEAKVPYTEVDYRGPTAVVIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNA 239 Query: 329 SVATGVLLGEWWRQN 343 SVA GVLL E RQ Sbjct: 240 SVAAGVLLYEAVRQR 254 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTK 164 ++ + G NA +S E I + F + + R K + V + +L Sbjct: 30 DKEVIAGRNAILEAIKSGRE-INKILFQEGIEKGRLKSIFAIANEKKIICQEVPKRKLDN 88 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 S TE H GV + + + + V+ + +L L++ +PHNLG ++R+ G Sbjct: 89 -STTERHQGVIAYVAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASG 147 Query: 223 VKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS-SEQG 280 VK +++ A + S A++ + G EH+ I N+ + + ++ G+ + T+ +E+ Sbjct: 148 VKAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERS 207 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + K + + +V+G E EG+ + D + G + LN SVA G+++ E Sbjct: 208 EDYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERI 267 Query: 341 RQN 343 + N Sbjct: 268 KSN 270 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 256 bits (654), Expect = 9e-67, Method: Composition-based stats. Identities = 62/308 (20%), Positives = 112/308 (36%), Gaps = 21/308 (6%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 GK R G R ++ + T + ++ + Sbjct: 4 GKKRRKTGARGSKLRNDVTMEGKALNRKKNNTSRKNMKNKNRDAKKTDL----------- 52 Query: 100 LRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDE 159 + VYG N + + I + +F K + +D+ Sbjct: 53 -----GNKFFVYGRNIVEEALIHSAKYIEKIYFSSKKKKNQKGIEDLAISKGLRPEYIDD 107 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMR 216 E+ + G + K + + A G + VL L+ +P NLG ++R Sbjct: 108 DEIAEFISENDAQGCIAVFNKFAYRDIDDALRLADIRGEKPLVLVLDRIEDPRNLGAIIR 167 Query: 217 SCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 + GV G+++ +D A + + +EG + I N+ L D +Q G+ V Sbjct: 168 TARCAGVHGIIIAKDRAAGITPTVAKVSEGAIFSIPCIMVTNLAAALKDLKQRGFWVYAA 227 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + G F+ + LVLG E +G+ + +D +V I + LN+SVA G+L Sbjct: 228 DA-NGDSCFEQEFGGSVALVLGNEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGIL 286 Query: 336 LGEWWRQN 343 + E R+N Sbjct: 287 MYEIVRKN 294 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 3/237 (1%) Query: 112 GENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G +A A+ Q PE + + P + L A + +L + Sbjct: 15 GIHAVAAVLQHAPERVRLLQLASGTLEPALAQLLEQAQARGISVERAGRDKLDQHHPGFQ 74 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGA-QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 H GV R + V + D VL L+ ++PHNLG +R+ G +V Sbjct: 75 HQGVIVHCAPRPVVEEKALVQRVRNGLDLVLVLDGVTDPHNLGACLRTADAAGAGAIVTP 134 Query: 230 -DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 + + AAI+ A G AE V + N+ L + AG V + L+ L Sbjct: 135 RHHSAALTPAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLDGAAHEDLYAVDL 194 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 +V+G E EG+ R+ D +I G V LN+SVATG+ L E RQ +A Sbjct: 195 RPPTAIVMGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARRQRRA 251 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 6/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG N F+ +A+ + ++ + KE LR + +V+E + K + Sbjct: 8 MYIYGVNPVLESFK-ISDALKEIYISKNRISKLKEILRLAEEKSISVKIVEETFIEKITQ 66 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H GV IK + T+ + + + L L+ +P N G + R GV Sbjct: 67 GV-HQGVVAKIKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADAAGVH 125 Query: 225 GVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 ++ Q ++ + + + G HV + +NI + ++ T+ ++ Sbjct: 126 AIIYQKKRSVGIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDVF 185 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +++ + L++G E +G+ D +KI G + LN+SVA+ ++ E RQ Sbjct: 186 WESDFTQPLGLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQR 245 Query: 344 K 344 K Sbjct: 246 K 246 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 8/240 (3%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASGTE 169 YG ++ ++L + PE ++ + ++ R ++ L + L K +G Sbjct: 8 YGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILELAEPFGISVQKASRDSLEKLAGLP 67 Query: 170 HHGGVCFLIKK---RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H GV ++ N + Q + Q Q +LAL+ ++PHNLG +R+ A G+ V Sbjct: 68 FHQGVVAAVRPHPVLNEKDLDQLL-QNNDQALLLALDQVTDPHNLGACIRTAAAMGIAAV 126 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY-TVVTT-SSEQGKPL 283 +V D + + A + A GGAE V+ I N+ L + + VV T E+ P+ Sbjct: 127 IVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKALPI 186 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 K + +V+G E GL + D V I +GN+ LN+SVA G+ L E RQ Sbjct: 187 QKYDFSGNVAIVMGAEDTGLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQR 246 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 6/240 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +V G NA + ++ + + + ++ ++ + + + +L SG Sbjct: 5 EKVIGRNAVRETLKA-GRNVNKLYISENHDSGLVSIIKMAKSKGISIQKTNNHKLDSMSG 63 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVK 224 + HH GV L ++++ + + + V+ L+N ++PHN G ++RS G Sbjct: 64 STHHQGVLALCSPVETISLRELIEKMNEKVTKPLVVILDNITDPHNAGAIIRSAYCAGAD 123 Query: 225 GVVVQDAALLESG-AAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GV++Q G +++ G EH+ NI +D ++ G VV G+ Sbjct: 124 GVIMQTRRSASIGEGMYKSSAGAIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDM-NGENY 182 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + LV+G E +GL ++ D I + LN SVA G++L E + Sbjct: 183 YDMDYDMPLALVVGAEGKGLGRLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFEAVKTR 242 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 5/246 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMA-ANRKAYHVVDEA 160 R ++T +YG N + + + + ++ PR LR +A R VV+ Sbjct: 5 RDSEKQTVIYGRNPVREALRG-GRTLHKILVVRGADPRLFRELRELARPGRIPVQVVERP 63 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 L + + H GV + ++ TV++ + ++ L +P NLG ++R+ Sbjct: 64 LLDRLTDGGAHQGVAATVSVKDFATVEELL--GTENPLIVVLNAIQDPRNLGAILRTAEA 121 Query: 221 FGVKG-VVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV G VV A + AA +TA G E++ NI L +F+Q G VV + Sbjct: 122 AGVDGAVVPSRRAAPLTPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADPDG 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + L + LV+G E GL A R D V+I +G V LN SVA +L+ E Sbjct: 182 PVSYWDADLGGPLALVIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEA 241 Query: 340 WRQNKA 345 RQ +A Sbjct: 242 VRQRRA 247 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 9/240 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG N + + + V F +R + A EL + +G Sbjct: 1 MLLYGRNPVLEALRDG--RVTEVLVARGVEEAF---VRSLKAFDVRLRFAPRIELDQLAG 55 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 T H GV ++ TV + +A G ++ L+ ++P N G ++RS G Sbjct: 56 TTQHQGVIAEVEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAH 115 Query: 225 GVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GVVV++ + S ++TA G ++ N+ ++D ++ G + + E + + Sbjct: 116 GVVVEERRSAPLSPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGAAGEAAQDI 175 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +T L K+ LV+G E EGL R+ D V+I G V LN SVA G+LL E R Sbjct: 176 GRTDLSGKVALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 71/319 (22%), Positives = 121/319 (37%), Gaps = 9/319 (2%) Query: 32 TGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISG 91 +GG R R R R S R R D D ++ Sbjct: 168 DDRGGFRGRDDRGGFRGRDDRGSSGSYRGRDDRGGFRGRDDRRDDRDNFRPSRDRE-LNR 226 Query: 92 KSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAA 149 + P ++ + +YG +A A Q + R W + F E + A Sbjct: 227 EVNTSPA-GDQEATDHELIYGRHAVLAALQGN-RTLNRIWVTPRLRYESTFLELIDAAKA 284 Query: 150 NRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA---QDCVLALENES 206 V + + + H G+ + + ++QA A ++ + + Sbjct: 285 GGAVVDEVPVERIRQLTDGAVHQGIAAQVAPYPYQELSDLIAQAKAATTDPVIVVADGIT 344 Query: 207 NPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDF 265 +PHNLG ++R+ G G+V+ A+ + A + A G E N+ L++ Sbjct: 345 DPHNLGAIIRTAEALGAHGLVIPQRRAVGVTAAVAKVAAGALESFPVARVVNLNRALEEL 404 Query: 266 RQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325 + AG+ + + E + + +TS +VLV+G E EGL R+ D + I G Sbjct: 405 KDAGFWIYGAAGEAKQSIHETSFSGPVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNS 464 Query: 326 LNISVATGVLLGEWWRQNK 344 LN SVA G++L E RQ + Sbjct: 465 LNASVAAGMVLYEVSRQRQ 483 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 95/241 (39%), Gaps = 6/241 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 + G N +S I + + + + ++ + + L K + + Sbjct: 4 IEGRNPVIEAIKS-GRTIKKIFIQEGVRGKKVDRIIKEASRFNIPLQKAKKDFLDKKARS 62 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H G+ + + ++ V + G ++ L+ +PHNLG ++R+ G G Sbjct: 63 HSHQGIIAMADDIKYVSPREMVEIAREKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHG 122 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 ++ + + + + G H+ NI + D + G + T +P + Sbjct: 123 LIYPRKRSADITPVVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRGTRPYY 182 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + LV+G E +G+ ++ D V I +G + LN SVA GV++ E RQ + Sbjct: 183 SADYKGPVGLVIGNEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRR 242 Query: 345 A 345 + Sbjct: 243 S 243 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 9/244 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG +A QA+ + P+ + ++ RF+ ++ + + +V+ L Sbjct: 3 EIIYGIHAVQAILKRDPQLFKEVYLLERRNDQRFQCIIKQLKQKKIIIKIVNRQWLDMQV 62 Query: 167 GTEHHGGVCFLI----KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 H G+ + ++ + ++Q A +L L+ ++PHNLG +R G Sbjct: 63 KGATHQGIIARVQTNRRQFQEQDLPALLAQHTA-PLLLVLDGVTDPHNLGACLRCADAAG 121 Query: 223 VKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V +++ + + A G AE + I N+ L ++ ++ T+ E Sbjct: 122 VNAIIIPRNRSAYLNATVKKVASGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEADS 181 Query: 282 PLFK--TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +++ + + LV+G E G+ + + ++I G+VA LN+SVA GV L E Sbjct: 182 HIYQTSFKFTSPIALVVGAEGNGIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFEV 241 Query: 340 WRQN 343 RQ Sbjct: 242 VRQR 245 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 101/237 (42%), Gaps = 8/237 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++YG + + +A+ ++ + + + + VD+ K Sbjct: 2 DKIYGRKPVLDTLDTDI-KVYKAYILKQNSKLVDKIIDKLNQKNIEISFVDKRFFDKI-- 58 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H GV ++ ++++ + ++ L+ +PHNLG ++RS FG V+ Sbjct: 59 DMNHQGVMLEVESFKYSSLEDLSDSSR----LIILDKIEDPHNLGAIIRSAESFGFDAVI 114 Query: 228 VQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + + + +T+ G +++ + N+ + D + G+ + + E + Sbjct: 115 IPERRSASVTSTVYKTSAGAINNIKVVRVTNLTRTIKDLKDKGFWIYGLAGEAHSDISHA 174 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L K+ LV+G E EG+ R+ D+ + I G V LN SVA + + E RQN Sbjct: 175 DLRGKVGLVVGNEGEGISRLVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQN 231 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 8/240 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + G +S AI + + +E L ++ L + Sbjct: 11 DLLAGRQPVMEALKS-GRAINKLVVAKGAREGSIREILGMARDRGIPITELERTVLDR-- 67 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGV 223 HH G+ + V++ + +A G VL L+ +PHN+G ++R+ G Sbjct: 68 EVRHHQGIIAHVAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGA 127 Query: 224 KGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ + + + G E+V N+V + ++AG ++ ++ + +P Sbjct: 128 HGVIIPKRRGGAITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPRP 187 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 F+ + L++G E +G+ R+ D V I G V LN SVA +L+ E RQ Sbjct: 188 YFRQDFRGPVGLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 9/240 (3%) Query: 112 GENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G +A + + ++I + PR E + + + V + L + + Sbjct: 6 GIHAVKHALDA-GDSIDELLIEKGKHHPRLNELIHLAKKHSIRFSFVPKEALARLAEGVP 64 Query: 171 HGGVCFL---IKKRNGTTVQQWVSQAGAQ--DCVLALENESNPHNLGGMMRSCAHFGVKG 225 H GV + T + W+ + VL L+ ++PHNLG +R+ G Sbjct: 65 HQGVVAKMVAAGAQAVPTFEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAEAAGCAA 124 Query: 226 VVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V+V AA + S + A G + + N+ ++ +Q G+ V + E + Sbjct: 125 VIVLKDHAADVHSPVVAKAACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLAGEAELSI 184 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L +V+G E +G+ R+ D + I G V LN+SVATGV L E RQ Sbjct: 185 YDAKLSGATAVVMGSEDKGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALFEINRQR 244 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 145/345 (42%), Gaps = 12/345 (3%) Query: 3 DEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDR 62 D K + + +S DD ++R R R +R D +R +++ + Sbjct: 79 DNFKRRDDSKRRDNFKSRDDLNRRYDFNRRDNFKRRDDSNRRDDFKRRDDYERKGAIKSN 138 Query: 63 KWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLR-----RQRAEETRVYGENACQ 117 ++ + R +++ + +++ + + +R E ++G+++ Sbjct: 139 EYSYLKSKEKPRNSFNQSQTRFSSNAQQTENYSENSSKKFQLSPNERNYEDWIWGKHSVF 198 Query: 118 ALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVC 175 A S I R W + + +F L+ + + V + L++ + H GV Sbjct: 199 AALNSE-RPINRIWCTSEIFSSEKFYLLLKDLKSKGVLIEEVPWSRLSQLTSGAVHQGVA 257 Query: 176 FLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DA 231 ++++ + + ++ ++AL+ ++PHN G ++RS F KG++V Sbjct: 258 LQHASTESISLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIRSAEAFDCKGIIVPQRR 317 Query: 232 ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAK 291 + +G + A G EH+ N+ +D+ ++ G+ ++ S + P+ + A Sbjct: 318 SAGLTGTVAKVAAGALEHIPVSRVVNLNRAIDELKKKGFIIIGLSGDGQVPISEFKEKAP 377 Query: 292 MVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 +V+++G E +G+ + D +KI G + LN SVA + L Sbjct: 378 VVVIVGAENKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 13/239 (5%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 ++ G NA + I + + R ++ L + D+ + Sbjct: 2 EKIIGLNAVREALDGSKN-IEKIEIYKGTNKDRIRDILSKASKKNIKIFYTDKRQ----- 55 Query: 167 GTEHHGGVCFLIKKRNGT-TVQQWVSQ--AGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 E+ G+ L+ + + + +++ + A + VL L+ +P N G ++RS FGV Sbjct: 56 --ENSQGIAALVSEYDYYLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGV 113 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+++QD ++ + ++++ G EHV I N+ + +D ++ GY + ++ Sbjct: 114 DGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAEADGETE 173 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 + P K+ LVLG E +G+ ++ D + I G + LN+SVA G+LL E + Sbjct: 174 YYNEPFPEKLCLVLGSEGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISK 232 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 7/235 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 +YG ++ + + + S + + + + L K + + Sbjct: 4 IYGRGPVIEALKNNK--VDKIYLA-SHEGSIIKIKAMAKEKKVLISSLSKDRLDKMAPGK 60 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H GV L+ Q+ + + + +L L+ +PHNLG + RS F G++ Sbjct: 61 NHQGVVALVSGYEYKDFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSALFFNFDGII 120 Query: 228 VQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + L + +T++G ++V N+ ++ ++AG+ + E G + Sbjct: 121 IPKHREALVNDTVYKTSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLE-GDNIKDV 179 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 K+ +++G E +G+ D +D +VKI LN SVA G+++ E R Sbjct: 180 DFSGKVAIIIGNEGKGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYEVIR 234 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 7/237 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 ++G+N A +S + F + ++E + VD+ L K + Sbjct: 5 IFGKNTVTAYLKSGQKPKNLYLFNKGN---YQEIVALAKEQGIRVQFVDKFRLDKMADGV 61 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV- 228 H GV I+ ++Q+ + A + ++ + +PHNLG ++R+C GV GVVV Sbjct: 62 -HQGVVIEIQDYKYHSLQEIIKGA-KNNLIVLCDQLEDPHNLGAILRTCDACGVDGVVVG 119 Query: 229 QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGKPLFKTS 287 + ++ + + + G V+ N+V + + ++AGY VV + + + Sbjct: 120 KHRSVGLTSTVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDAVDYTEFN 179 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + +VLV+G E +G+ + D+ I G+V LN+SVATGVLL + R+ K Sbjct: 180 VDMPLVLVVGSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRRK 236 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 4/243 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELT 163 E+ + G ++ I R + + + L +D+A L Sbjct: 2 EEKRMIEGRRPVMEALRA-GTKITRILLQKGSRGKPVDDILALAKEYSVKVEYLDKAALD 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNLGGMMRSCAHFG 222 K + + +H GV T +++AG ++ L++ +PHNLG ++R+ G Sbjct: 61 KRATSRNHQGVMAETPPFRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALIRTAYAAG 120 Query: 223 VKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 G+++ + + + AA+RTA G AE++ N+ LD+ + AG V + Sbjct: 121 CDGIIIPERRAAQMTPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDGES 180 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 VLV+G E EGL ++ D V++ G VA LN SVA +L+ E +R Sbjct: 181 VYTTGDYQGGTVLVIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEVYR 240 Query: 342 QNK 344 Q + Sbjct: 241 QRE 243 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 107/255 (41%), Gaps = 5/255 (1%) Query: 92 KSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAA 149 + E + + +YG NA + + + R S + + A Sbjct: 5 EIRKSHEQESVKPSGRVYIYGRNAVRECLLAGRRKVYRLLVAYSHSASQTLEAIESLAAR 64 Query: 150 NRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC-VLALENESNP 208 + V+ + L + + +H GV + + ++++ ++ + +L L++ +P Sbjct: 65 SGLQIERVERSILDRLTHGANHQGVVIEASEFSYSSIEDLLASGELRGKDILMLDSLQDP 124 Query: 209 HNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 N G ++R+ FG+ V++ + +E + A + + G EH+ N+ ++ Sbjct: 125 QNFGTLLRTAEVFGIGAVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNLARTASKLKE 184 Query: 268 AGYTVVTTSSEQGKP-LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGL 326 GY V+ ++ ++ L + LV+G E G+ + R DL VKI G + L Sbjct: 185 YGYWVLGLEYDESSSVIWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKIPQAGRIGSL 244 Query: 327 NISVATGVLLGEWWR 341 N +VA + L E ++ Sbjct: 245 NAAVAGSIALYEIYK 259 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 99/246 (40%), Gaps = 7/246 (2%) Query: 103 QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAE 161 Q E+ + G N + +S I + + + K+ L + V + + Sbjct: 3 QENEQEWIGGRNPVLEVLRSD-RDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQK 61 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSC 218 + K H GV + + + A A+ + L+ +PHNLG +MR+ Sbjct: 62 IEKVVSGA-HQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTA 120 Query: 219 AHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 G G+++ + + + + G E+V + N+V +++ ++ G + T + Sbjct: 121 DSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDA 180 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + + +V+G E G+ R+ D V + G V LN SVA +LL Sbjct: 181 KGSSDYRTMDVDMPLAIVIGSEGFGMSCLVREKCDFLVHLPMRGKVTSLNASVAASLLLY 240 Query: 338 EWWRQN 343 E +R+ Sbjct: 241 EVYRKR 246 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 7/271 (2%) Query: 78 DETPEKADHGGISGKSFIDPEVLRRQRAEE----TRVYGENACQALFQSRPEAIVRAWFI 133 +E G+ D R +E +G N + E++ R W Sbjct: 2 EEKRRPFRGKAGGGRKGRDERPGRELSRDESDGLLLCWGRNPSLEQLERSGESVERVWLA 61 Query: 134 QSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ- 192 + V F+ + +A R A VD L + +G H G+ +++ + ++ + Q Sbjct: 62 RGVEAEFEAQVVRLA-GRTALERVDRLALDQMTGGAVHQGIALSLRRPDEVSLDDLLDQL 120 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQ 251 AG V+ L+ +PHNLG ++R+ G V+V D ++ +G ++ + G A Sbjct: 121 AGGPALVILLDRCQDPHNLGSVIRTAEAAGASAVLVPKDRSVRLTGTVVKASAGAALRFP 180 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPN 311 I+ N+ LDD ++AG+ VV + E +PL K + + VL +G E GL + R Sbjct: 181 VISVVNVKRALDDLKEAGFWVVGLAGESSEPLGKLAWDQRTVLAVGAEGTGLAELTRKSC 240 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 D +I +G LN VA + EW R+ Sbjct: 241 DFLARIPMSGQAESLNAGVAAALGAYEWARR 271 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 5/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 + + G NA + ++ E + S R + V L Sbjct: 4 KNQWIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDG 63 Query: 165 ASGTEHHGGVCFL---IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 G H GV ++ ++ V AG Q +L L+ +PHNLG +RS A Sbjct: 64 VGGGVRHQGVAARYAAVRLWEEHDLKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAA 123 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV V++ D ++ + +T+ G A+ + I N+ L + ++ + + E Sbjct: 124 GVTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVE 183 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 L+ L + LVLG E +GL R+ D+ +I G V LN+SVA GV L E Sbjct: 184 TSLYALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAV 243 Query: 341 RQN 343 RQ Sbjct: 244 RQR 246 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 62/246 (25%), Positives = 114/246 (46%), Gaps = 5/246 (2%) Query: 100 LRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANR-KAYHVVD 158 + ++ VYG +A + + ++ + + + F LR +AA+R +V Sbjct: 1 MDKKEGGAELVYGRHAVKEALLA-GRSLYKILVARGLGGAFFHELRSLAASRSVPVQIVP 59 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC 218 L + + H G L+ N ++ + + A C+L L ++P NLG ++R+ Sbjct: 60 AEALDRLTARGVHQGCVALVSPYNYASLDEIL--ATHPSCLLVLAYITDPRNLGAILRTA 117 Query: 219 AHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 A GV+GV++ + A++ + GGAEHV+ N+ L ++ G+ V+ + Sbjct: 118 AAVGVEGVIIPSRRAAGLTAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEA 177 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + L++ +V+V+G E GL R D+ V+I T + LN SVA V+L Sbjct: 178 DAKVSLWEAEWNEPLVVVIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILY 237 Query: 338 EWWRQN 343 E R+ Sbjct: 238 EVLRRQ 243 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 13/249 (5%) Query: 98 EVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHV 156 + R ++ G N + +S I + + + KE L + Sbjct: 4 NKEKAGRNVMEKIIGINPVTEVLKSDKN-IEKIEVYKGIKKDTIKEILNLASKRNIKIFY 62 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGT-TVQQWVSQ--AGAQDCVLALENESNPHNLGG 213 D TE+ GV L+ + + + ++ + A + V+ L+ +P N G Sbjct: 63 TDRR-------TENSQGVVALVSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGA 115 Query: 214 MMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++RS FGV G+V+QD ++ + ++++ G EHV I NI + +D F++ GY V Sbjct: 116 IIRSAECFGVDGIVIQDRNNVKVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKV 175 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 ++ ++ S P K+ LVLG E G+ R+ D +KI G LN+SVA Sbjct: 176 YGAEADGENLYYEESYPKKVCLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAG 235 Query: 333 GVLLGEWWR 341 G++L E + Sbjct: 236 GIILAEMSK 244 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 95/240 (39%), Gaps = 7/240 (2%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKA-SGTE 169 G +A ++ I R V E + V ++L S Sbjct: 30 GRHAIIEAIKA-GRGINRILLADGVRGSGVNELRDLAREHGIMVDTVGRSKLDALVSQDV 88 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H G + V++ ++ A G +L L+ +P NLG ++R+ GV G+ Sbjct: 89 RHQGAVAYVAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGVHGI 148 Query: 227 VVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ ++ + R + G E+V NI + ++ G+ + + + Sbjct: 149 LLPRRHSVPLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEIYDR 208 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 +L +VLV+G E G+ RD D V++ G + LN SVA +L+ E RQ +A Sbjct: 209 ANLTGALVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQRRA 268 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 95/244 (38%), Gaps = 7/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELT 163 + ++G A Q+ E I + + + KE + V + Sbjct: 3 EKNEMIFGVRAVIEAIQAGRE-IDKVLVKKDIQSELSKELFACLKNTLIPVQRVPVERIN 61 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 + + ++H GV I + V + G + L+ ++ N G + R+C Sbjct: 62 RIT-RKNHQGVVAFISSVTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCEC 120 Query: 221 FGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G +++ ++ + A++T+ G + N+ N + + G+ +V + + Sbjct: 121 AGADAIIIPSKNSVSVNADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAATEKG 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K + + +++G E G+P D +KI G + LN+SVA G+L+ E Sbjct: 181 DYDYTKANYKDPVCIIMGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEA 240 Query: 340 WRQN 343 +Q Sbjct: 241 VKQR 244 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 49/254 (19%), Positives = 103/254 (40%), Gaps = 7/254 (2%) Query: 97 PEVLRRQRA-----EETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAAN 150 P L++ + ++ ++G NA + + + + + ++ + A + Sbjct: 5 PSKLKKNKPLLGNHQKCWIWGRNAVRETLFAGFWPMYELHLSDHLKSEEIEQLEQQAARS 64 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHN 210 + + ELT+ H G+ + T+++ + Q L L+ +P N Sbjct: 65 TIPVFISTDKELTQKCRASDHQGMIAKMAPFPYTSIELFNQQEITSPLFLILDRIQDPFN 124 Query: 211 LGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAG 269 G ++RS G G+ E + RT+ G HV + ++V++ D++Q G Sbjct: 125 FGAIIRSAEIMGADGIFSGTHEQCEVTSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNG 184 Query: 270 YTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 +V T+ + + L + +++G E G+ + V+I G LN++ Sbjct: 185 INIVGTAMQASEKLNDYNFQQPTAVIVGNEGTGISPELQAECTHLVRIPQQGKTESLNVA 244 Query: 330 VATGVLLGEWWRQN 343 V+ +LL E RQ Sbjct: 245 VSASILLYEASRQR 258 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 109/244 (44%), Gaps = 6/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 E TR++G S+ + I + + + ++ P FKE R + V +L Sbjct: 2 EETTRIFGIRTVIEAIDSKKD-IEKVFIQKDLSGPLFKELNRNLKEGNYNISYVPVEKLN 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNPHNLGGMMRSCAH 220 K S +H GV I ++++ V ++ + L+ ++ N G ++R+ Sbjct: 61 KLSKNGNHQGVVANISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAEC 120 Query: 221 FGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV G+++Q+ + + ++T+ G ++ ++I + + + ++ + + Sbjct: 121 CGVTGIIIQEKGSAPINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKT 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +F L + +++G E +G+ ++ D + K+ G++A LN+SVA G L E Sbjct: 181 DDVIFDIDLKQPIAIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEA 240 Query: 340 WRQN 343 RQ Sbjct: 241 VRQR 244 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 10/241 (4%) Query: 112 GENACQALFQSRPEAIVRAWFIQSV----TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 G +A +AL + RPEA++ + + PR ++ A L K +G Sbjct: 9 GFHAVEALLRHRPEAVLELFVQDTRADRDDPRLAALMQAAKDFGIAIQRARREVLEKHAG 68 Query: 168 TEHHGGVCFLIKKRNGTT---VQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 ++ G+ + R + QW+ A+ +L LEN ++PHNLG +RS GV+ Sbjct: 69 PQN-QGIVARARPRRPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQ 127 Query: 225 GVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-GKP 282 V+V A + A RTA G AE + N+ ++LD R G VV T+ E+ + Sbjct: 128 AVIVPRRNAAGLTPVACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSES 187 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 LF P + +V+G E GL RD D ++I G V LN+SVATGV+L + Q Sbjct: 188 LFTFQAPESLAVVMGAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVMLFQVRAQ 247 Query: 343 N 343 Sbjct: 248 R 248 >UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Beijerinckiaceae RepID=B2IK44_BEII9 Length = 293 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 126/303 (41%), Gaps = 20/303 (6%) Query: 37 GRPGKSRADGGRRP-ARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFI 95 R S+ R P A+ + PR + WE G+ P + S + Sbjct: 2 SRMDSSKTHQSRGPTAKRSETKPPRSKPWEGQ---------GESRPHRPKSAPASQEK-- 50 Query: 96 DPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYH 155 +P R+ + ++G +A + +S + + ++ + + A A H Sbjct: 51 NPSPFRQSSPDVILLHGFHAVREALRSDQRTCLALYATEAAAEKLAPDSK---AAGLAPH 107 Query: 156 VVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 +V +L++ G++ H GV + + + +++G VL L+ ++PHN+G + Sbjct: 108 IVTAEDLSRRLGSQTVHQGVLLEARPLEPLDITEIPTRSG---VVLVLDQITDPHNVGAI 164 Query: 215 MRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ A F V +V + G + + A GG EHVQ + N+ L+ + Y V Sbjct: 165 VRTAAAFDVDAIVTTERHAPALGGVLAKAASGGLEHVQIVPVVNLARALETLGRLNYLRV 224 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 S + L + LVLG E GL R+ D ++D G + LN+S A Sbjct: 225 GLDSAAEADFTQLPLQRPIALVLGGEGTGLRRLTREKCDFLARLDMPGKIKSLNVSNACA 284 Query: 334 VLL 336 V+L Sbjct: 285 VVL 287 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 12/242 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANR-KAYHVVDEA 160 RQ+ + G+ A + S I +F R E A N ++ V Sbjct: 25 RQKEGLFLLEGKRAVEEALAS-GWTIRALFFT-----RLPEGWEQQAENSSLPWYEVPLP 78 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 L K + TE V L++ R ++ + A + VL L+ +P NLG ++R+ Sbjct: 79 VLQKITATEDPQSVAALVELRR----EELAAFAPERGMVLVLDRIRDPGNLGTLIRTADA 134 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G GVV+ ++ A L + +R+ G H+ TG + + RQ GY + T+ E Sbjct: 135 LGAAGVVLLENTADLYNPKVVRSTMGSLFHLPVFTGVKTGELEEWCRQHGYALWATALEG 194 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + + + + P K LVLG E EG+ D +VKI G+ LN++VA G+++ E Sbjct: 195 AEDMTRLTWPEKTALVLGSEAEGVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFEA 254 Query: 340 WR 341 R Sbjct: 255 AR 256 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 19/255 (7%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS--VTPRFKEALRWMAANRKAYHVVDEAELTKA 165 + G++ + I R + ++ L A V A+L K Sbjct: 3 EFIEGKHPVWEALSTH-VPITRIFLADGNKHDRLLQDILHMAARQHIVMETVPRAQLDKR 61 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---------------CVLALENESNPHN 210 S H G+ + ++ +++ Q ++ L++ ++ N Sbjct: 62 SKRGSHQGIMAQAQPFAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDAGN 121 Query: 211 LGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAG 269 LG + RS G G+++ + + + +++ G H+ N+ L + G Sbjct: 122 LGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALARLKNEG 181 Query: 270 YTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 Y V S + ++ +L + LV+G E GL ++ D V + G V+ LN++ Sbjct: 182 YWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLNVA 241 Query: 330 VATGVLLGEWWRQNK 344 + V + EW RQN+ Sbjct: 242 QSATVCMYEWLRQNR 256 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 103/247 (41%), Gaps = 7/247 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQ-SVTPRFKEALRWMAANRKAYHVVDEA 160 R+ E V G N L ++ + + + + E + A H V Sbjct: 6 NSRSSENVVCGRNPVLELLKAARRTVNKIMVSRTARGVVISEIINLAKQKGIALHSVPPE 65 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA--QDCVLALENESNPHNLGGMMRSC 218 +L K S + G+ + T + + ++ + ++ L+ +PHNLG ++R+C Sbjct: 66 KLDKFSESS--QGIVAEVSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAIIRNC 123 Query: 219 AHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 FG GV++ A + +++ G EH+ +N + ++ + +V Sbjct: 124 VAFGADGVIIPKWRAAGVNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVGAE- 182 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 G+ L K LP + +++G E GL + +D + I ++ LN S A+ V+L Sbjct: 183 NGGRILEKIDLPFPLAVIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAVILY 242 Query: 338 EWWRQNK 344 E ++ K Sbjct: 243 EIAKKRK 249 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 6/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK-EALRWMAANRKAYHVVDEAELT 163 E T ++G A +S I + + + + E + + ++ A V +L Sbjct: 2 TETTNIFGLRAIIEAIESGS-TINKIYLQKGLRGSLYYELDKLIKDSKIATSTVPVEKLN 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 + S +H G I + ++ + +A L L+ S+ N G ++R+ Sbjct: 61 RLSKNSNHQGAVAQISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAEC 120 Query: 221 FGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV G+++Q + + + I+T+ G A + D+I + L + + V + + Sbjct: 121 TGVNGIIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEKT 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 ++ + + +++G E+ G+ + D + K+ +GN+ LN+SVA GV L E Sbjct: 181 DSSIYDVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYET 240 Query: 340 WRQN 343 RQ Sbjct: 241 VRQR 244 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 104/262 (39%), Gaps = 15/262 (5%) Query: 97 PEVLRRQRAEET-----RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAAN- 150 P RR EE VYG+N L +S + + + P MA Sbjct: 7 PRRPRRSSTEEQPKNESLVYGKNPVTELLKSGS-GVDTVLIAEGMAPAVAAYYTAMAKEA 65 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESN 207 V +L +GTE H GV + TV+ ++ + G ++ + + Sbjct: 66 GATVKRVHPNKLRLMTGTESHQGVAAFASEIEYVTVEDLLNVAREKGEPPFLVLSDGIED 125 Query: 208 PHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 PHNLG +MRS G G+V+ + I+++ G AE + NI + + Sbjct: 126 PHNLGAVMRSALLCGAHGIVIPKRGGASVTPTVIKSSAGAAERLPVARVANIGETIRRLK 185 Query: 267 QAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN---V 323 G V + G PL K +L + LVLG E G+ + D V++D V Sbjct: 186 DQGVFVYCADMD-GVPLRKNNLTGPIALVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGV 244 Query: 324 AGLNISVATGVLLGEWWRQNKA 345 N+SVA G++L E Q A Sbjct: 245 DSFNVSVAAGIILYEIQSQRAA 266 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 6/243 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 VYG + +++ P I+ + + + R K + + L S Sbjct: 3 ELVYGIHTVESIVNQSPNRILIVYIVSNPRDLRLKSLIYRIRKMNINIQECTRRVLNIKS 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ----DCVLALENESNPHNLGGMMRSCAHFG 222 H G+ + + + +L L+ ++PHNLG +RS G Sbjct: 63 MKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADAAG 122 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V ++V D + + + A G ++ V + N+ L ++ +V + + Sbjct: 123 VHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRSNQ 182 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 LF T L + LV+G E G+ R+ D V I + LN+SVATG+ L E R Sbjct: 183 ILFNTRLIDPIALVMGSESSGIRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFETVR 242 Query: 342 QNK 344 Q K Sbjct: 243 QRK 245 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 6/241 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG N +SR + + + R A R A +D EL + Sbjct: 4 LIYGVNPVLEALKSRQRKPLELLVLHGAESSRLSAVCEAARARRVAIRSLDRRELDALAE 63 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H GV ++ ++ ++ + AG + +L L+ ++PHNLG + RS G + Sbjct: 64 GARHQGVALRLESQSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAVGCQ 123 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG-KP 282 G+V+ D + + AA + + G ++ N+ L+ F+QAG+ V + + G + Sbjct: 124 GIVLPKDRSCPITAAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAGSQS 183 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 L+ T L +VLV+G E +GL D R D + I G V+ LN SVA GV L E RQ Sbjct: 184 LYDTDLRGNVVLVVGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEVLRQ 243 Query: 343 N 343 Sbjct: 244 Q 244 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 96/253 (37%), Gaps = 16/253 (6%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEA---------LRWMAANRK 152 R R G + E +V +F +S ++ + L+ RK Sbjct: 28 RSREGIFIAEGIRMVRETPH---ERLVGLYFSESFEKKYGKEVLDVISGGDLKVREQIRK 84 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLG 212 ++ +A + S T+ GV ++ + T Q GA ++ L+N +P NLG Sbjct: 85 KTEILSDAVFSYVSDTKTPQGVLAVVHQMEYTLGQM---TEGAIPHLMILDNLQDPGNLG 141 Query: 213 GMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYT 271 + R+ GV G+++ D + + IR+ G + + +++ + ++ Sbjct: 142 TIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVYVEDLRETIHTLKEKNIK 201 Query: 272 VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 + K ++G E GL + D ++I G V LN +VA Sbjct: 202 SYAAHLDGKNTYDKEDYRQGTAFLIGNEGNGLREEIAQCADTWIRIPMCGQVESLNAAVA 261 Query: 332 TGVLLGEWWRQNK 344 VL+ E RQ + Sbjct: 262 ATVLMFEVSRQRR 274 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G N + ++ + + + + E + V+ A L K +G H Sbjct: 7 GRNQVREALRA-GRPLNKILLAPHLEGQAIGEIINLARERGVPLQRVNRAALEKLAG-HH 64 Query: 171 HGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV L R ++ ++ +AG ++ L+ +PHNLG ++RS G GV+ Sbjct: 65 HQGVVALAAAREYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAVGAHGVI 124 Query: 228 VQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + + A R A G E+V N+ L++ + G + + + G+ F Sbjct: 125 IPRRRGVGLTAAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAAGDAGQEAFNA 184 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +VLVLG E GL R D V + G + LN++ A VL+ E RQ Sbjct: 185 DFTVPLVLVLGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVLRQR 241 >UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Y1_THEAS Length = 256 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 7/243 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 A + VYG N +L + + + + P + + A + VD L + Sbjct: 8 AGDDLVYGRNPVMSLLEGGGDCLKVLISRRRSDPVRERIVEICRARGIPFQEVDGKVLDR 67 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV-----LALENESNPHNLGGMMRSCA 219 GT H GV + ++ AGA D V L +++ +PHNLG M+R+ Sbjct: 68 MVGTSSHQGVVARVSPVGILKLEDLYRLAGASDPVAAFALLVVDHVEDPHNLGAMIRTAE 127 Query: 220 HFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA-GYTVVTTSS 277 G V+ L +G ++ + G A V I N+ + ++ G V + Sbjct: 128 AAGFSAVLFPSRREALPTGVVVKASAGAALRVPLIMVGNVSQAIRRVKEDLGLWAVGLEA 187 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + +F LP ++ LV+G E +GL A D + I G LN+SVA G+++ Sbjct: 188 QGRASVFDERLPPRIALVVGSEGKGLSRVASAACDDILMIPMMGASGSLNVSVAAGIVMY 247 Query: 338 EWW 340 +W+ Sbjct: 248 QWY 250 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 10/241 (4%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 +YG++AC + ++ + + ++ + V+ A++ G++ Sbjct: 12 IYGKHACLSALKNPNRVCIELLITHKFIDKNDPVIKLAKNRKIGIRDVEIAKIDSLVGSK 71 Query: 170 H-HGGVCFLIKK---RNGTTV---QQWVSQAGAQDC--VLALENESNPHNLGGMMRSCAH 220 H G+ + RN +++ + V+Q A +L L+ ++ HN+G ++R+ A Sbjct: 72 AIHQGMLLKVLPLFGRNASSLIRIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVLRTAAC 131 Query: 221 FGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 F V VV+ + ES + + G + V + N+V L+ +Q Y + Sbjct: 132 FNVDAVVLTEHNSPSESCGMAKASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYGFDASG 191 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 G L + + V++LG E +G+ + D VKI + + LN+S A + + Sbjct: 192 GTCLHQVEFSERRVVILGAEGKGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAIAMYSV 251 Query: 340 W 340 + Sbjct: 252 F 252 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 124/332 (37%), Gaps = 37/332 (11%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K G R+ + K ED + +A + DP + Sbjct: 7 KKGPTKGSGGKHRNKLKGYGPTPKAEDRVYHKAYKAKKVAER----------RQMADPRL 56 Query: 100 LRRQRAEE-------TRVYGENACQALFQ-SRPEAIVRAWFIQSVTPRFKEALRWMAANR 151 R+R ++ VYG N+ + P + + R +E ++ N Sbjct: 57 AARRRVDKFASADTSDLVYGRNSVLEALRVGVPSSTLYIMSRIEHDDRTREIVKIAGMNG 116 Query: 152 KAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ--------------- 196 D E+ + + + +H GV + +++ + +A + Sbjct: 117 LHMLEADRLEMDRIARSGNHQGVILKVDPFQYSSLNELADRAEKKAKAMEAANSAAARIA 176 Query: 197 --DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPI 253 +AL+ ++P NLG ++RS A FG GV++ + + + AA + + G A H+ Sbjct: 177 ARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVNAAAWKVSAGAAAHMPVA 236 Query: 254 TGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPND 312 N+ L+ ++ GY VV K + +T +V+VLG E GL R+ D Sbjct: 237 RVVNLTKALEGLKERGYYVVGLDGGGDKLVGETGFESDPLVVVLGSEGSGLGRLVRETCD 296 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 I + +V LN SVA G+ L + Sbjct: 297 AIAGIPISSSVESLNASVAAGISLYAVSNARR 328 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 99/238 (41%), Gaps = 5/238 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 E +YG N + I + + + L+ + + E+T Sbjct: 3 EYIYIYGINPVVESLLNPAVKINKLYLLPQ-GKNNDYYLKLAKSRQLKVVFCSAVEMTTL 61 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSCAHFGV 223 T H + I K ++ ++A +L L+ S+PHN G ++R+C F V Sbjct: 62 VQTSKHQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFNV 121 Query: 224 KGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGK 281 GV++ D + + +T+ G +V +N+ N ++ ++ G+ + TS + + Sbjct: 122 DGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNTKAQ 181 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + + + L++G E G+ D + I G++ LN+SVA+ +L+ + Sbjct: 182 NVSELKYDIPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQI 239 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 52/242 (21%), Positives = 92/242 (38%), Gaps = 4/242 (1%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 + +YG + + + + +S T KE + +A R + K Sbjct: 2 KTELLYGMHPVREALLAGKRQFQAVYVSESRTGEGKEDILSLARERGIEVKTPDQSFFKG 61 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAG--AQDCVLALENESNPHNLGGMMRSCAHFGV 223 GV + ++ V +AG L ++ ++P N G +MR+ GV Sbjct: 62 QDRGG-QGVAARVSLFKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAGV 120 Query: 224 KGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ D + S A + + G EH+ N+V + + G + Sbjct: 121 NGVIMPDKRSSPLSPAVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASGT 180 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +++ L +V+G E +GL R D V I G + LN SVA + + E RQ Sbjct: 181 VWEADLTGPAAVVVGNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMRQ 240 Query: 343 NK 344 + Sbjct: 241 RR 242 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 100/238 (42%), Gaps = 5/238 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G N + +++ + + KE L + +L + + T Sbjct: 10 VIWGRNPVIEALVA-GQSMEKILIAHD-SKAPKELLDLAKERGIKVQIAPRQKLEELANT 67 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 + GV ++ ++ + + + L++ ++P N+G + R+ FG G++ Sbjct: 68 KKTQGVVAILSPITYVPEEELFRKTIEEKGFFVVLDHITDPQNVGSIARTVEVFGGIGLL 127 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + D + + ++++ G H++ +I + F++ G V + GK + K Sbjct: 128 IPKDRSAPINAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYALE-KGGKDITKV 186 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 M +VLG E EG+ + +D+RV I G V LN+S A + L E ++ + Sbjct: 187 DFAYPMCIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQE 244 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 65/325 (20%), Positives = 122/325 (37%), Gaps = 24/325 (7%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K G R+ + + K ED + +A + ++ + Sbjct: 4 KKGPTKGSGGKHRNSLRGKGPTPKAEDRVYHKAYKAKKQAEKRQRSDPRLAARRRAAHF- 62 Query: 100 LRRQRAEETRVYGENACQALFQ-SRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVD 158 + V G N+ + P +++ R +E +R + D Sbjct: 63 ---TSNSDDLVIGRNSVLEALRVGVPASVLYVANRIEHDDRTREIVRLAGQHGLNLLEAD 119 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA-----------------GAQDCVLA 201 E+ + + + +H GV +++ + V +A A+ +A Sbjct: 120 RLEMDRIARSGNHQGVILKADPFQYSSLHELVERAERKARAMEMADSKASRLSARPLFIA 179 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ ++P NLG ++RS A FGV GV++ + + + AA + + G A H+ N+ Sbjct: 180 LDGITDPQNLGAVIRSAAAFGVNGVILPERRSASVNAAAWKVSAGAAAHMPIARVVNLTK 239 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 ++ ++ GY + K + +T +V+VLG E +GL R+ D I Sbjct: 240 AIEALKERGYYSIGLDGGGSKLVGETGFETDPLVVVLGSEGKGLSRLTREACDAIASIPI 299 Query: 320 TGNVAGLNISVATGVLLGEWWRQNK 344 T V LN SVA G+ L + Sbjct: 300 TSAVESLNASVAAGIALYATVNARR 324 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 240 bits (612), Expect = 7e-62, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 7/242 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAA---NRKAYHVVDEAELTKA 165 +YG + A + + + +S A++ A R +++ EL K Sbjct: 10 LIYGLHPVAAAWINPERRCRGLYVTESALAALDGAVQRAAELGLERPDPTFLEKEELDKL 69 Query: 166 SG-TEHHGGVCFLIKKRNGTTVQQ--WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 H GV V+ +++ Q V+ L+ ++PHN+G +MRS A FG Sbjct: 70 LPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFG 129 Query: 223 VKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 + V+VQD A +G +TA G + V + N+ LD +QAG+ V + Sbjct: 130 ARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESGAR 189 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 PL + L + LVLG E EGL + D ++ G V LN+S A V L E R Sbjct: 190 PLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVAR 249 Query: 342 QN 343 + Sbjct: 250 RR 251 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 7/247 (2%) Query: 103 QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR-WMAANRKAYHVVDEAE 161 +R V+G A S E I + + + L+ + + + V + Sbjct: 12 KRESNQMVFGIRAVIEAIDSGKE-IESLFVQRGLGGSLFLELKALIKEHEIGFQQVPIEK 70 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ---AGAQDCVLALENESNPHNLGGMMRSC 218 L + + ++H GV +I ++ + + G +L L+ ++ NLG + R+ Sbjct: 71 LNRIT-RKNHQGVIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTA 129 Query: 219 AHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 GV ++V E + AI+T+ G + DN+ V +G +V ++ Sbjct: 130 ECSGVHAIIVPKKGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTE 189 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + ++ A +++G E G+ D +D KI G + LN+SV+ GV+L Sbjct: 190 KTEESIYSVDYTAPTCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLY 249 Query: 338 EWWRQNK 344 E RQ + Sbjct: 250 EAIRQRQ 256 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 109/252 (43%), Gaps = 8/252 (3%) Query: 97 PEVLRRQRAEET-RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR-WMAANRKAY 154 PE + + ++ ++G ++ I + + ++ L+ ++ + Sbjct: 10 PESGQAEPNKKDDFIFGLRPVIEAIEAGK-TIDKIFMQNALQGDIYYELKTLLSKHNIRP 68 Query: 155 HVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ---AGAQDCVLALENESNPHNL 211 + V +L + + ++H GV I ++Q + Q G +L L+ ++ N Sbjct: 69 NYVPIEKLNRFT-RKNHQGVVAFISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNF 127 Query: 212 GGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G + R+ GV +++ + A + AI+T+ G +++ N+ + +D +Q+G Sbjct: 128 GAICRTAECVGVHAIILPEKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGL 187 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 V + S + K ++ +V+G E G+ +D ++K+ G LN+SV Sbjct: 188 QVFSASEKAQKLIYDVDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSV 247 Query: 331 ATGVLLGEWWRQ 342 A G +L E RQ Sbjct: 248 ACGAILYEAVRQ 259 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 108/244 (44%), Gaps = 4/244 (1%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA-YHVVDEA 160 RQ+ + V G + S + + + Q+ + + L +A ++ V +A Sbjct: 22 RQKERKLAVEGIRFVEEALSSTWQTEILLYTDQACQAQRGKILLDLARDKGVEVLAVSDA 81 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 + + S TE G+ ++++ + T++ + + + V+ ++ +P NLG ++RS Sbjct: 82 IMKELSDTETPQGMLAVLRQPDY-TLEDII-RPDQKPLVVIVDGVQDPGNLGTIIRSADA 139 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G GV++ + + + +R G H+ I ++ L+ G T++ Sbjct: 140 AGASGVILLKGTVDIYNPKTLRATMGSLFHLPVIQVSDVNEALEYLASIGVTLLVGEPAG 199 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 G P+FK +L + +++ E G + N ++ I G LN+++AT ++L E Sbjct: 200 GIPVFKANLQTPVGIIVANEGAGPREEIFRYNHQKITIPMPGCAESLNVAIATSIILYEA 259 Query: 340 WRQN 343 RQ Sbjct: 260 IRQR 263 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 55/259 (21%), Positives = 109/259 (42%), Gaps = 22/259 (8%) Query: 107 ETRVYGENACQALFQSRPEAIVR---------AWFIQSVTPRFKEALRWMAANRKAYHVV 157 + + G +A + ++ I + ++ + PR K+ L Sbjct: 2 KKIITGFHAIDEILRAEKLKIEKEKNRKPSLEIFYSKE-GPRVKKILEAARKLNLKIEKK 60 Query: 158 DEAELTKASGT-----EHHGGVCFLIKKRNG---TTVQQWVSQAGAQD--CVLALENESN 207 D L + T H G+ + + N +V ++ ++ + V+ L++ ++ Sbjct: 61 DNQFLDSLTKTLPEQLRDHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTD 120 Query: 208 PHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 PHN G ++RS FG+ G++V + + + + G V + N+V ++ + Sbjct: 121 PHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNLVRTVERLK 180 Query: 267 QAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGL 326 + G+ + + GK L + P K VL++G E G+ + D V I G + L Sbjct: 181 KEGFWIYGADA-GGKALPNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSL 239 Query: 327 NISVATGVLLGEWWRQNKA 345 N+SVA G+LL E R+ + Sbjct: 240 NVSVAAGILLYEISRKKEV 258 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 76/337 (22%), Positives = 136/337 (40%), Gaps = 38/337 (11%) Query: 22 DSDKRTHNPRTGKGGGRPGKSRADGG-RRPARDDKQSQPRDRKWEDSPWRTVSRAPGDET 80 S + ++P++ KG P KS + ++ + +PRD+ G Sbjct: 2 SSQRERNDPKSRKGPNGPKKSGSKAAFSGQSKPYAKDKPRDK--------------GGYA 47 Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPE-AIVRAWFIQSVTPR 139 P + + P+ R +E+ ++G +A +A +++ +R + P Sbjct: 48 PAQTARSQTQTHAQARPKPPVRV-SEDGWIWGLHAVEAALKNQSRLGPIRLYVT----PD 102 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASG----TEHHGGVCFLIKKRNGTTVQQWVSQA-- 193 ++AL +A R H V E+ + SG H GV G + + A Sbjct: 103 RQKALEQVAPKRGDLH-VRLTEMAEFSGFLPQGAVHQGVALNGPPLEGDDLNGLMEGALR 161 Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQP 252 + ++ L+ ++P N+G ++R+CA FG G+++QD G +TA G + V Sbjct: 162 QERPVLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMDRVPF 221 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF---------KTSLPAKMVLVLGQEYEGL 303 N+ L+ + G+ + + E L + P +V+V+G E EGL Sbjct: 222 ARVTNLSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSEGEGL 281 Query: 304 PDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + D VKI G LN+S AT + L E Sbjct: 282 RRLVAEHCDHLVKIPMPGGFESLNVSHATSIALYEAL 318 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 237 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 107/263 (40%), Gaps = 10/263 (3%) Query: 91 GKSFIDPEVLRRQRAE---ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 + F P R+ + V G ++ AI R + ++ T +R + Sbjct: 3 QRKFKKPGGFRQHAPRPKASSLVIGRQPIVEAMKAGK-AIERIFMLRGATGEIIPQIRQL 61 Query: 148 AAN-RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALE 203 A ++V +L + + +H G + N +Q +S + G L L+ Sbjct: 62 AEQYNIPINLVPVEKLNGLT-SANHQGCVAITGNINYLDLQDVISHVTEQGQTPLFLILD 120 Query: 204 NESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVL 262 ++ N+G + RS G + +++ D + AI+++ G E + ++++ + Sbjct: 121 GITDVRNIGAIARSAVCCGAQAIIIPDRGIAALNEEAIKSSAGALETISVCRVNSLLKAI 180 Query: 263 DDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 D G V+ + E L+ L + +++G E +G+ A +D I GN Sbjct: 181 DTLHLNGIKVIASEMEAETKLYDCQLQEPVAVIMGSEDKGVFPALIKASDTLFHIPMAGN 240 Query: 323 VAGLNISVATGVLLGEWWRQNKA 345 N+SVA G++L E +Q A Sbjct: 241 FESFNVSVAAGIILYEAMKQRGA 263 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 98/241 (40%), Gaps = 4/241 (1%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE-ALRWMAANRKAYHVVDEA 160 R + + V G + + + + + + + E L +A + V Sbjct: 26 RMKHMQFTVEGLRIVEECVKHNGDIAYIIYSEEIYSTQGAEKLLDKIALAGYTLYEVSSQ 85 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 +K S TE+ G+ ++ +N ++++ SQ G + + L+ +P N+G ++R+ Sbjct: 86 LFSKISTTENPQGIMAVVHMKN-RSLEEIKSQKGKELFFVILDRIQDPGNMGTIIRTAES 144 Query: 221 FGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 V++ ++ + +R G H+ I D+ LDD ++ ++ + Sbjct: 145 ANADAVIITKGSVDPYNSKTLRATMGAIFHMPIIQCDD-DRWLDDLKENEVKLIAADLDT 203 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K + +++G E G+ +A D RV I G + LN SVA +L+ + Sbjct: 204 DKTYIDIDYNTSIGIIIGNEANGISEALLSKVDQRVIIPILGKIESLNASVAASILIYKA 263 Query: 340 W 340 Sbjct: 264 A 264 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 11/249 (4%) Query: 102 RQRAEETRVYGENACQALFQS--RPEAIVRAWFIQSVT--PRFKEALRWMAANRKAYHVV 157 R V G + S RP ++ + PR + L +AA V Sbjct: 25 RDEYNLFVVEGIRLVEEAAGSTWRPAMC---FYTEKAAAAPRVQATLEILAAKGCRIFPV 81 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRS 217 + K + TE G+ +++K+ T Q+ ++ ++ L+N +P N+G ++R+ Sbjct: 82 ADNVYAKITDTEQPQGILCVMEKKRYTFDD---LQSSDRELIVVLDNVQDPGNVGTVVRT 138 Query: 218 CAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 G GV++ + A L SG +R G H+ ITG V + G ++ T+ Sbjct: 139 ADAAGCCGVILTKGCADLFSGKTVRATMGSLFHLPVITGVAEQEVAAFLERQGIRLLATA 198 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + L + + +V G E G+ + D R+ I G LN++VA V+L Sbjct: 199 LDSSSLYHDVDLRSPVAIVFGNEGAGVSKVILEKADERLYIPLYGRAESLNVAVAAAVIL 258 Query: 337 GEWWRQNKA 345 E RQ + Sbjct: 259 YEARRQRRV 267 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 93/249 (37%), Gaps = 10/249 (4%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 ++ + + G + I + Q V+ + V EA L Sbjct: 4 SDTSTLIGRGPVLEALKRDDLGIEKVMLKQDVSGAQIGAIRSIADDRGTPVQYVPEARLR 63 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAG--------AQDCVLALENESNPHNLGGMM 215 S H GV + V +S AQ +L ++ ++P N G M+ Sbjct: 64 HESDGATHQGVVAITAPIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAML 123 Query: 216 RSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 RS G GV+V + AAI+ + G A + D++ VL ++ GY V Sbjct: 124 RSAVAAGTDGVIVPTREMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYG 183 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 PL+ + +VLG E +GL + D + I G LN+SVATG+ Sbjct: 184 AEGTAETPLWDADWDRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGL 243 Query: 335 LLGEWWRQN 343 L+ E R Sbjct: 244 LVFEAARSR 252 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 10/271 (3%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 E + K + Q + V+G + +S + I + + + ++ Sbjct: 2 ENRRNPRVNRPNYKPRPGGSKPQYQPQPDEMVFGIQSVIETLKSD-QQIDKLYMEKGLSN 60 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGA 195 + R V L + + ++H GV LI + + ++ + G Sbjct: 61 --PDIQNLAFQKRVTIQRVPVERLDRFT-RKNHQGVVCLIAQVQYVKLSNVIADVFERGE 117 Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPIT 254 L L+ ++ N G + R+ G++ +V+ A + A++T+ G H+ Sbjct: 118 VPFFLLLDRITDVRNFGAIARTAECTGIQCIVIPGRGAAAINSDAMKTSSGALNHISVCR 177 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK--TSLPAKMVLVLGQEYEGLPDAARDPND 312 ++ + +++G TVV + + + L++ T L M +++G E +G+ D Sbjct: 178 EPDLTETVKYLQESGITVVACTEKSARDLYERTTDLTGPMAIIMGSEEDGISPELLRMVD 237 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 VKI G V LN+SVATGV+L E RQ Sbjct: 238 THVKIPLLGAVGSLNVSVATGVILYEAVRQR 268 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 9/261 (3%) Query: 84 ADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEA 143 + I ++ + R + + + G ++ + I + + Sbjct: 6 SKENTIYKEAKKLKDRKNRNKINKYVIEGFRLVDEAIKANLD-IDYLILTEIGYEKLDNY 64 Query: 144 LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALE 203 + + + + + + + TE+ G+ ++K N + G D L + Sbjct: 65 IDKDKIKKHKVYCITDTLFKELASTENPQGIIAIVKMNNKK-----LDFQG--DFYLFCD 117 Query: 204 NESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVL 262 +P NLG ++R+ GV G+V+ + + + IR+ G ++ D+ +++ Sbjct: 118 KVQDPGNLGTIIRTAHAAGVNGIVLSKGTVDIYNEKTIRSTMGSLFYMPIYYDDDEFSLI 177 Query: 263 DDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 ++ G+T++ TS E K FK L K++L +G E G+ + D D RVKI G Sbjct: 178 KSLKKDGFTLIVTSLESSKDFFKEDLKGKIILTVGNEGNGVSNEVLDLADRRVKIPMPGG 237 Query: 323 VAGLNISVATGVLLGEWWRQN 343 LN+++AT +++ E RQN Sbjct: 238 AESLNVAIATSIIIYEKVRQN 258 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 102/244 (41%), Gaps = 7/244 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTK 164 + ++G ++ F++ E I + + + + T + + +R V +L + Sbjct: 3 NDKMIFGLHSISEAFEAGKE-IDKIFIRRGLKTEQTEAIIREAVERCVPVMHVPIEKLDR 61 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQW---VSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + +++H GV ++ T + Q + + G +L L+ ++ N G + R+ Sbjct: 62 LT-SKNHQGVVAILSAIEYTRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECA 120 Query: 222 GVKGVVVQDAALLESGA-AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV +++ + + G AI+T+ G + +I + ++ G +V S + Sbjct: 121 GVDAIIIPERGSVSVGGDAIKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAASEKAA 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + +V+G E G D V I G + LN+SVA G+++ E Sbjct: 181 DLYTDVPMKLPLGIVMGAEDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVV 240 Query: 341 RQNK 344 RQ + Sbjct: 241 RQQR 244 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELTK 164 ++ ++G ++ E I + +++ +E + V +L + Sbjct: 22 DKDMIFGIRPVIEALEAGKE-IDKILIQRNIEQAVVQELFELANRVKVPVIKVPVEKLDR 80 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + ++H GV + N ++ VS ++G ++ L+ ++ N G + RS Sbjct: 81 VT-RKNHQGVICYLSAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARSAECL 139 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV ++V A + A++T+ G H+ D++++ + +Q G ++ S + Sbjct: 140 GVDAMIVPSRGAAQLNSDAVKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIACSEKAS 199 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 ++ L V+++G E +G+ D V I +G++ LN+SVATG++L E Sbjct: 200 INVYDEDLTDPCVILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMILSEVT 259 Query: 341 RQN 343 RQ Sbjct: 260 RQR 262 >UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5GSE7_WOLTR Length = 258 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 108/240 (45%), Gaps = 5/240 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANR-KAYHVVDEAELTK 164 + +YG++ C +++ + ++ +++ +R ++ +V L++ Sbjct: 8 KNFWLYGKHTCMLALKNKNRLCIELLVTENSYREYEKEIRQCVDSKGIKVQLVKNKILSE 67 Query: 165 -ASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 S + +H G+ + + ++++ + ++ L+ ++ HN+G ++R+ A F Sbjct: 68 VLSKSANHQGIALKVAPILHSLSIKEIAESSSDSSTIVILDQVTDTHNIGSILRTSACFN 127 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V +V+ + + E+ + + A G + V I N+V ++ ++ GY S + Sbjct: 128 VDALVLPYNHSPSENASIAKAASGTLDIVPLIHVTNVVKTMEYLKKVGYWCYGFDSNAKE 187 Query: 282 PLFKTS-LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + K+V++ G E +G+ ++ D +KI + + LN+S A + L + Sbjct: 188 NIDEIKSFGKKIVIIFGSEGKGMRRLVKENCDYLLKIPMSNVIDSLNVSNAAAIGLYSVY 247 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 14/321 (4%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDET-PEKADHG 87 N R+ K P K RR A K P K ED + + ++ EK Sbjct: 7 NRRSVKKKKGPLKGTGGHSRR-ALKPKGPTP---KAEDRVYHAAHKRKVEKEIAEKKKAQ 62 Query: 88 GISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 + ++ ++ A + G NA + + I ++ R + +R Sbjct: 63 AEAHRTRTSIKIA----AGNELIVGRNAVFEAVDAGIDIIRVFLAGNALDERIGKVVRTA 118 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALEN 204 A V + +L ASG H + + + + + Q + + ++AL+ Sbjct: 119 TALGAPVLEVTKMDLENASGESAHQSIGIEVPEYDYCSAQDLLERTKENAQIPLIVALDQ 178 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 ++PHNLG ++RS FG+ GV++ + + + AA + + G A V N+V L Sbjct: 179 VTDPHNLGAVLRSGGAFGITGVLISERRSASVNAAAWKVSAGAAARVPVARETNLVRALG 238 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 + ++AG VV L L +V+V G E +GL R+ D V I + Sbjct: 239 ELKEAGCFVVGLDGGGDVSLRDLDLATGPLVVVTGAEGKGLSRLVRETCDQIVSIPISSA 298 Query: 323 VAGLNISVATGVLLGEWWRQN 343 V LN +VATG+ L E + Sbjct: 299 VESLNAAVATGIALYEVASKR 319 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 99/237 (41%), Gaps = 10/237 (4%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 R+ G N ++ + I + F + + L+ +A+ R ++ Sbjct: 2 ERIIGINPVTEALLNKEKNIEKLEFYNGLKGETVQKLKDLASKRNIKIFYTGKKID---- 57 Query: 168 TEHHGGVCFLIKKRNGT-TVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVK 224 + GV I + + + +D VL L+ +P N G ++RS F V Sbjct: 58 --NSQGVAVYISNYDYYKDFDEAYEELAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKVD 115 Query: 225 GVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +++ + + + ++T+ G E+V N+ + ++ ++ Y V + E Sbjct: 116 LIIIPERNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEASINY 175 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + K++LVLG E G+ R+ D +KI G + LN+SVA+G+LL Sbjct: 176 NEENYSNKIILVLGNEGSGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILLSRIV 232 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 55/337 (16%), Positives = 112/337 (33%), Gaps = 46/337 (13%) Query: 53 DDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYG 112 ++K + + R T +R+ + SG S R + + G Sbjct: 34 NEKGAPYKKRTRVSGDSGTRARSSSAHARSFSSQKRSSGASSAYMRPRRERGVRAPMIEG 93 Query: 113 ENACQALFQSRPEAIVRAWFIQSVTPRFK-----EALRWMAANRKAYHVVDEAELTKASG 167 AC ++ + + +++ + + A V ++ + S Sbjct: 94 RRACFEALEAH-LPLKKLLVQENMNAALQTADVERLITCARERGIACEYVKKSAMDSLSS 152 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQD------------------------------ 197 H GV F ++ + Sbjct: 153 HGAHQGVMFEAAPFAYAEFGDVLAAIDRKGARATDASAADASAADASAADAHELVTNTDN 212 Query: 198 ---------CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA-AIRTAEGGA 247 V+ L++ + N G ++RS G V++ +A G A +T+ G Sbjct: 213 QTAAHKQASLVVLLDHVVDEGNFGAIVRSAEVVGASCVIIANARCASVGVGAYKTSAGAV 272 Query: 248 EHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAA 307 H+ + N+ +D+ ++ G+ V+ S + ++ K+ L++G E G+ Sbjct: 273 LHMPIVQVVNLARAIDELKEHGFWVIGASEHAQQTVWDAPFTGKVCLIMGSEENGISSLV 332 Query: 308 RDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + D K+ G + LN++ A V+ EW RQNK Sbjct: 333 QKKCDFICKLPQRGRIESLNVAQAATVMCYEWMRQNK 369 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 61/252 (24%), Positives = 97/252 (38%), Gaps = 6/252 (2%) Query: 95 IDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKA 153 R + T +YG NA + E + W +V + A+ A+ Sbjct: 7 APTREPRTLPDDVTILYGRNAVHEALRGSRE-VQHIWATAHAVEEPWLAAVAHDASAVDV 65 Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGG 213 V D + + SG+ H GVC + V + ++ ++AL+ +P NLG Sbjct: 66 NVVADGGWIERRSGSPDHQGVCAQVAPFRYAYVDELLAV--EHPLIVALDEIQDPQNLGA 123 Query: 214 MMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 + R+ G G+V+ + + A + + G EH+ N+ + L D R G V Sbjct: 124 IARTAECAGATGLVIPARRSADVTPAVCKASAGAVEHLPIARARNLADFLGDARGVGAWV 183 Query: 273 VTTSSEQGKPLFKTSLPAK-MVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 + G P +VLVLG E GL D + + G + LN+S A Sbjct: 184 YGAEGDGGVPYTGVDYSGPGVVLVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAA 243 Query: 332 TGVLLGEWWRQN 343 LL E RQ Sbjct: 244 ASALLYEIVRQR 255 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 7/244 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELTKA 165 +YG NA + ++R R + +R +D EL + Sbjct: 3 DLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELDRR 62 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQ---WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 +H GV + + G +L L++ +P N+G ++R+ G Sbjct: 63 LRDANHQGVALECSDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVG 122 Query: 223 VKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT-TSSEQG 280 V GVV+ E + A + T+ G EH++ N+ ++ + AG VV E+ Sbjct: 123 VHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERA 182 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + L + LVLG E GL R+ D V++ G +A LN++VA ++L W Sbjct: 183 YEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAW 242 Query: 341 RQNK 344 R + Sbjct: 243 RVRE 246 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 8/242 (3%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVD--EAELTKAS 166 +YG +A +L ++ + + + + + + + +D + + Sbjct: 4 LIYGIHAVDSLVEANQAKEILVFKKSNANHKIESIIAKAESKGLKVTFIDSFKQLPGRVR 63 Query: 167 GTEHHGGVCFL----IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 +H + + K + ++ + Q +L L+N +PHN G +RS G Sbjct: 64 KDANHQNIFAIEINDFKTYSENDIENLIPQ-DKNAFILILDNVQDPHNFGACIRSAHSAG 122 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 + +++ D + + + A G AEH + + N+ ++ +Q G ++ + E Sbjct: 123 IDFIIIPKDNSAPVNATVKKVACGAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAGEAND 182 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ +L + +V G E G+ + D K+ G V+ LN+SVATG+ L E R Sbjct: 183 SLYSMNLADSVAIVAGAEGSGMRQRTKASCDFLAKLPMLGEVSSLNVSVATGIALYETVR 242 Query: 342 QN 343 Q Sbjct: 243 QR 244 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 10/235 (4%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 +G+ A ++I + + + E + + N+ Y +V+EA + + + Sbjct: 5 FGKKALLDAI-GNKQSISKVYLLSKN----YELINLINKNKITYEIVNEAWFKQFDHSLN 59 Query: 171 HGGVCFLIKKRNG--TTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H + F + K+N T+++ ++ + VL L+ +P N G ++R+ FGV + Sbjct: 60 HQNIAFKLVKKNFQKTSLESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDAI 119 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 + + + I+T+ G ++ I +N+ N + + + G+ V TS + +P K Sbjct: 120 IYKKHHQASINDLVIKTSMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLLKSQPYEK 179 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K V ++G E +G+ D ++ID G+V LN+ VATG++L + Sbjct: 180 VDYANKTVFIVGNENKGVSPLILKNADQSIRIDMFGDVQSLNVGVATGIILAHYR 234 >UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, group 3) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBT7_DESAH Length = 253 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 51/250 (20%), Positives = 92/250 (36%), Gaps = 5/250 (2%) Query: 100 LRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVD 158 + R+ + G + + ++ + + R E L + D Sbjct: 1 MSRKSEAVEILCGIHPIREALRAGRRKFYAILVSKDRSRARLAEILGVAQEQSIPVEITD 60 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA---QDCVLALENESNPHNLGGMM 215 L + H GV + + V Q +L +E +P N G ++ Sbjct: 61 TMTLDALTDNARHQGVAARVSPFATVRAEGIVKQMPKGVSNRFILVIETLEDPQNFGALI 120 Query: 216 RSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ GV +++ + + S + R + G EH + N +L + G+ V Sbjct: 121 RTALCAGVDHIMIPKERSASPSPSVSRASAGAMEHAEISLITNTAGLLRQLKAMGFWVAG 180 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + PLF L +VLV+G E++G+ + D V + V LN SVA G+ Sbjct: 181 LDGQGTTPLFSADLTGNLVLVVGGEHKGIRPLVKKECDFLVSLPIKAGVTSLNASVAGGI 240 Query: 335 LLGEWWRQNK 344 + E RQ + Sbjct: 241 AMYEALRQRQ 250 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 105/248 (42%), Gaps = 9/248 (3%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQS---VTPRFKEALRWMAANRKAYHVVDEAE 161 ++ VYG +S+ I + +F + ++ +KE + V + + Sbjct: 2 SKLEIVYGIRPLIEAIRSKK-TISKLFFQRGFRKISNAYKELISLSKKENIPIQTVPKQK 60 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSC 218 + ++H GV ++ ++ + + G ++ L+ ++ N G ++R+ Sbjct: 61 FYQLK-NKNHQGVFAILSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRTS 119 Query: 219 AHFGVKGVVVQDAALLESGA-AIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 A G +++ G+ +I+T+ G V NI N ++ +G +V+ + Sbjct: 120 ACVGADAIIIPKKYTAMIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSATE 179 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + L+LG E +G+ + + + KI ++ LN+SVA GV+L Sbjct: 180 KSNIYWYNIDFSGPTALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVILY 239 Query: 338 EWWRQNKA 345 E +RQ K+ Sbjct: 240 EVFRQRKS 247 >UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_3644c n=102 Tax=Actinobacteridae RepID=Y3644_MYCBP Length = 322 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 110/306 (35%), Gaps = 7/306 (2%) Query: 39 PGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPE 98 PG SR G R + K + P H + ++ P Sbjct: 2 PGNSRRRGAVRKSGTKKGAGVGSGGQRRRGLEGRGPTPPAHLRP---HHPAAKRARAQPR 58 Query: 99 VLRRQRAEETRVYGENACQALFQ-SRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV 157 ++ E V G N + P + R E + A + A + Sbjct: 59 RPVKRADETETVLGRNPVLECLRAGVPATALYVALGTEADERLTECVARAADSGIAIVEL 118 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMM 215 A+L + + H G+ + N ++ A Q ++AL+N S+P NLG ++ Sbjct: 119 LRADLDRMTANHLHQGIALQVPPYNYAHPDDLLAAALDQPPALLVALDNLSDPRNLGAIV 178 Query: 216 RSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 RS A FG GV++ + + A RT+ G A + N+ L + G V+ Sbjct: 179 RSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIG 238 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + G L +V+V+G E +GL R D V I LN SVA GV Sbjct: 239 LDAGGGTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNASVAAGV 298 Query: 335 LLGEWW 340 +L Sbjct: 299 VLAAIA 304 >UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHP2_RHOVA Length = 310 Score = 233 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 23/309 (7%) Query: 38 RPGKSRADGGRRPAR----DDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKS 93 +P K R D R+ R D + PRD + W + + ++ + A +G+S Sbjct: 6 KPSKPRHDESRKQGRAAGAKDADTGPRDGAPKQEAW---AFSRFGDSRKSARRPKTAGES 62 Query: 94 FIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA 153 F + A ET YG ++ +A + I AW ++ R L A + A Sbjct: 63 FA------KLAAGETL-YGLHSVEAALANPKRRIRHAWLTENAAARLAPLLD---ARKIA 112 Query: 154 YHVVDEAELTKASG-TEHHGGVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNL 211 + A+L +G H G ++ + ++ G V+ L+ ++PHN+ Sbjct: 113 ATLALPADLDALTGPGAVHQGAVLQVEPLAQPGLDDFLDALGDAPATVVILDQVTDPHNV 172 Query: 212 GGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++RS A FG+ ++VQD + + A ++A GG EHV I N+ VL+ ++ + Sbjct: 173 GAVLRSAAAFGIGALIVQDRHSPPLTAALAKSASGGLEHVPVIEVVNLARVLEKLKERDF 232 Query: 271 TVVTTSSEQGKPLFKTSLPA--KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 + SE + F +L ++ V G E +GL R+ D + G + LNI Sbjct: 233 LCIGFDSEGAQ-RFDAALAGGRRVAFVFGAEDKGLRRLVREGCDAIAALSAPGPIKSLNI 291 Query: 329 SVATGVLLG 337 S A ++ Sbjct: 292 SNAAAIVFH 300 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 VYG++A + P + W R + L + V L + + Sbjct: 25 LVYGQHAAREAAAYDPAGVEAVWVEHGRRDARLERLLDKLGRQGVTVERVHRRVLDQMAE 84 Query: 168 TEHHGGVCFL---IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 +H G+ R + V +L L+ +PHNLG MRS A G Sbjct: 85 GGNHQGIVLRYSGTPARGEGELADLVDAEPE-PLLLVLDRVQDPHNLGACMRSAAAAGAH 143 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GVV D A S A +TA G + + N+ L R AG VV + E K Sbjct: 144 GVVAPRDRAAALSPAVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAAGEAEKSC 203 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++ L + LVLG E EGL R+ D RV I G++ LN+SVA GVLL E RQ Sbjct: 204 YEVDLRGPLALVLGGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQR 263 >UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Bacteria RepID=Q6UCQ6_9PROT Length = 257 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 105/247 (42%), Gaps = 2/247 (0%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK 152 S ++ ++++ + +YG +A + +F + K ++ N Sbjct: 2 SKRSKKLPKKRQNSDYWIYGHHAVVGALMNENRVKYEVYFTSEAEKKLKNEIKLENINVI 61 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA-QDCVLALENESNPHNL 211 + + G +H G+C ++K + +++ + + L+ +P N+ Sbjct: 62 SIKKTRDEIDLLLKGISNHQGICMRVEKLQTPKLSDFINNLNEERSIIFLLDQLDDPQNV 121 Query: 212 GGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G + RS F + G+++ + ++ E+ +TA + V I NI + + + +GY Sbjct: 122 GAIFRSALAFNIDGIILTNTNSVTENSFLAKTASSALDKVPFIKIQNISSCIKILKDSGY 181 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 + + + + +T+ P K+V +LG E +G+ D +KI + N+ LN+S Sbjct: 182 WIYGLDMKAERSITETTFPKKIVFILGSESKGMRKITDSLCDEGLKIKMSDNLESLNVSN 241 Query: 331 ATGVLLG 337 +++ Sbjct: 242 TAAIIMF 248 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 73/323 (22%), Positives = 117/323 (36%), Gaps = 15/323 (4%) Query: 31 RTGKGGGRPGKSRADGGRRPARDDKQSQPR--DRKWEDSPWRTVSRAPGDETPEKADHGG 88 R G + + G RR + + P+ DR P + Sbjct: 11 RRRPGSKKGPTKGSGGNRRQGLEGRGPTPKAEDRVGHPKARAKARAEARAAQPTRTKQLE 70 Query: 89 ISGKSFIDPEVLRRQRAEETRVYGENAC-QALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 + F PE V G NA +A P + V R +R Sbjct: 71 KIRRRFDVPE-------GYEIVCGRNAVAEAARAGVPISRVFMAVSAESDDRLGAVVRRA 123 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALEN 204 + +L + H GV + T+ + +A G ++AL+ Sbjct: 124 TLIGCPVLETTKLDLEALTDGAVHQGVAIEVPAYGYTSALDLLDRARAVGHTPLLVALDQ 183 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 ++PHNLG ++RS FG GV++ + + + + + G A V N+V L+ Sbjct: 184 VTDPHNLGAVLRSTGAFGGDGVIIPERRSVGVNATVWKVSAGAAARVPVARETNLVRTLE 243 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 ++ G VV + SL + +VLV G E GL R+ D+ I + Sbjct: 244 TLKKEGCFVVGLDGGGETLMEDLSLADSPLVLVTGAEGAGLSRLVRETCDVIASIPISQT 303 Query: 323 VAGLNISVATGVLLGEWWRQNKA 345 V LN +VATG+ L E R +A Sbjct: 304 VESLNAAVATGISLYEVDRLRRA 326 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 124/331 (37%), Gaps = 36/331 (10%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K G R+ + + K ED + A ++F DP + Sbjct: 4 KKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYFA----------KKAAIKRTFADPRL 53 Query: 100 LRRQRAEE------TRVYGENACQALFQ-SRPEAIVRAWFIQSVTPRFKEALRWMAANRK 152 R+R ++ V G NA + P + R +E ++ Sbjct: 54 AARRRVDKLGSDSDELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIVKLAGMQGL 113 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA-----------------GA 195 D E+ + + + +H G+ ++ ++Q+ V +A A Sbjct: 114 RLLEADRLEMDRIAHSTNHQGIIVKVQPYQYHSLQELVERAEKKARAMEAADSDSARINA 173 Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPIT 254 + +AL+ ++P NLG ++RS A FG GV++ + + + AA + + G A H+ Sbjct: 174 RPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVAR 233 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDL 313 N+ + R+ G+ + K + +T +V+VLG E +G+ R+ D Sbjct: 234 VVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDA 293 Query: 314 RVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 I + V LN SVA G+ L + Sbjct: 294 IAGIPISSAVESLNASVAAGISLYAVANARR 324 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 10/254 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R E + G + C + Q+ + E R V E Sbjct: 5 RNHEECMWICGRHVCISALQNPNRVCRELLVTGEFLKKHPEVARMAQNKGIRPRRVAAEE 64 Query: 162 LTKA--SGTEHHGGVCFLIKKRNGTT-----VQQWVS-QAGAQDCVLALENESNPHNLGG 213 + K G H G+ + K G V+ VS A V+ L+ ++ +N+G Sbjct: 65 IGKIWGHGRTVHQGIALRVGKLFGRDGDKLRVEDIVSGSAFTASTVVLLDQVTDINNVGA 124 Query: 214 MMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++RS A F V V++ + I R + G A+ V + N+V ++ +Q GY Sbjct: 125 IVRSAACFDVDAVILPEHHSPSENCIITRVSSGAADLVPVVRVGNLVKTMEYLKQNGYWC 184 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + K L + S + ++LG E +G+ R+ D VKI + + LN+S A Sbjct: 185 YGMDVDGDKALHEISFCERRAIILGSEGKGIRRLTREHCDHLVKIPMSARINSLNVSNAA 244 Query: 333 GVLLGEWWRQ-NKA 345 ++L + Q +++ Sbjct: 245 AIVLYSSYLQLHRS 258 >UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D323_WIGBR Length = 250 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 4/240 (1%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG + + +++ I+ F++S +FK+ + VD+ L K + Sbjct: 3 EIIYGIHVIEEFIKNKSNKILCILFLKSRKDIKFKKLILISNEKNIKIKFVDKKFLNKIT 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 + H G+ IK + + L L+ +P NLG +RS FGV+ Sbjct: 63 NNKKHQGIVAYIKNSKILKEPFLLKMLENKKNYFFLILDGIMDPRNLGSCIRSAYIFGVQ 122 Query: 225 GVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V++ ++ + S A + A G + + I N+V ++ ++ ++ TS + + Sbjct: 123 AVIIRKNRSAKISSAVKKVASGSLDLIPLIYVTNLVRTINLLKKYNIQIIGTSRKAQLDI 182 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L + +V+G E G+ ++ D + I N LNISVATG+ + E R+N Sbjct: 183 CNKKLKQSIAVVMGSENLGISRLVKENCDNILNIPTVKNNLPLNISVATGICIFEIIRKN 242 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 97/244 (39%), Gaps = 8/244 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDE 159 R V G + ++I + + + E + + +V E Sbjct: 24 RDAHGLYFVEGIRFVSDAIDN-GQSIAKIIISEKLEGLNGGSELIEKVKGACSDISLVPE 82 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 + S T+ G+ +IKK + + +++ + V+ L+ +P N G ++R+ Sbjct: 83 KIFREVSDTQTPQGILAVIKKNKY-SFDKVITEGSS---VVILDCLQDPGNAGTIIRTAD 138 Query: 220 HFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 G+ V++ + L S +R+ G H+ G NI ++ +Q Y V+ + Sbjct: 139 AAGISAVLMSKGCVDLYSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDYKVIASHLS 198 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 F+ L + +++G E G+ D D VKI G LN SVA V++ E Sbjct: 199 GKNNYFQEDLTGRSAIIVGNEANGISDETAYMADSLVKIPMPGKAESLNASVAASVMIYE 258 Query: 339 WWRQ 342 RQ Sbjct: 259 IVRQ 262 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 102/234 (43%), Gaps = 9/234 (3%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG++ L + + W + + + + +VV E +L + T Sbjct: 5 LIYGKHVIYELLKKHKNMVKEIWV---KNLKLLDEFD-LKNTKIKINVVSENKLDQLLKT 60 Query: 169 -EHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 E H G+ IK N T + ++ + VL L+ +P+N G ++RSC+ V G Sbjct: 61 NELHQGIIAQIKDFNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSLLNVDG 120 Query: 226 VVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQGKPL 283 +++ D + + ++T+ G A ++ +N+ N + + G+ + T+ + + Sbjct: 121 IIILDKKQVQVNSTVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQNSTDM 180 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 KT K V+++G E +G+ + +D + + N+ N SVA ++ Sbjct: 181 TKTQFANKSVVIIGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 4/234 (1%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G + Q L ++R + + + + A V E+ Sbjct: 9 GIHTVQQLLADG--HVLRLYVADNKKSKNLTALVGEAQARGVPVETVALYEIEMMLPGVR 66 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD 230 H GV + + R + +L L++ +PHNLG +RS A GV V++ + Sbjct: 67 HQGVAAVSEARGQAADWADAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLIPN 126 Query: 231 -AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 A + + A G E + N+ ++ ++ G VV + + L+ T L Sbjct: 127 SRAADVTPVVEKVACGATEILPLFRVSNLRREVERMQRQGIWVVGGAGGAAQSLYATDLT 186 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + +++G E EG+ R+ D V+I + LN+SVA GV+L E RQ Sbjct: 187 VPLAVIVGNEGEGIRHGLREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQR 240 >UniRef50_B1ZWW3 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Opitutaceae RepID=B1ZWW3_OPITP Length = 250 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 4/239 (1%) Query: 104 RAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELT 163 + +E + G A +A F + P AI R +F + R R +A +K Y V+ AEL Sbjct: 2 KPKELTICGLAAVRAQFAADPGAIKRLYFDYATGRRIGVICRTLAQRKKIYRCVEPAELE 61 Query: 164 KASGTEHHGGVCFLIKKRN--GTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 K GT HHGG+ +++ + + +L L+ N HNLG + R+ A F Sbjct: 62 KVGGTLHHGGIVAVVEAPEMREPAAADLTAWVKRCEPLLVLDRIGNAHNLGAIARTAAFF 121 Query: 222 GVKGVVVQD--AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G+ +++ AA S AA R AEGG H++ D++ L AGY V+ ++ Sbjct: 122 GLPRLILPRDPAAAQPSEAAYRVAEGGMTHLELARVDDLPAFLRSLVAAGYDVIGAATRG 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 G P ++ + LVLG E GL V I G+G V LN+SVA VL+ E Sbjct: 182 GLPQAQSHTGKPIALVLGNEEHGLSAEVAAACTRLVTIPGSGKVESLNVSVAGAVLIWE 240 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 102/239 (42%), Gaps = 7/239 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELTKA 165 V+G +A + ++R +++ + + + ++A++ N +D + Sbjct: 6 DIVFGVHAVTEVIKNRKRRVIQLYVLDNKAGHRGIEDAIKAAKRNNIKIDRMDVKTMDAL 65 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAG--AQDCVLALENESNPHNLGGMMRSCAHFGV 223 + +H G+ ++ + + + +D +A++ ++P NLG ++RS A G Sbjct: 66 TKKGNHQGIAARVEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACLGF 125 Query: 224 KGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 +++ + + + + A G E V + N+ L D + G+ + G+ Sbjct: 126 STIILPSRRTVGLTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYGADM-GGQS 184 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT-GNVAGLNISVATGVLLGEWW 340 + KT VLV+G E G+ + + D V I G+V LN + A +++ + + Sbjct: 185 IVKTDYSFPAVLVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMFDMF 243 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 53/236 (22%), Positives = 102/236 (43%), Gaps = 3/236 (1%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 V G N + + + ++ +S R +E + A A L+ G Sbjct: 14 VSGFNPVREVLLTGRVEVLEMIVARS-DQRVRELVELGALRGIAPRQETRDGLSALVGHA 72 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 HH GV +++ ++ + + G ++ ++ L+ +P NLG M+RS G +GV+V Sbjct: 73 HHQGVALRMREFPYAALEALLEKPTGEREPLVILDCLQDPQNLGAMLRSACFLGARGVIV 132 Query: 229 Q-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 D + + IR A G ++ I +N+V L+ ++ G + ++ + ++ Sbjct: 133 PRDRSARVTSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLDAQAAQTIYDAD 192 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L + LV+G E +GL D V+I G + LN + + + L E R+ Sbjct: 193 LTVPLGLVVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 122/329 (37%), Gaps = 12/329 (3%) Query: 27 THNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPG-DETPEKAD 85 + N R+G GR SR GR A S R K G ++ Sbjct: 9 SKNTRSGGAAGRGASSRGASGRGGATGRGGSAGRGSKKAADWGGYFGSKNGKGSKGGRSA 68 Query: 86 HG-----GISGKSFIDPEVLRRQRAEETRVYGENACQALFQSR---PEAIVRAWFIQSVT 137 G G G+ ++ + G A A+V+A Q Sbjct: 69 QGVRAVQGTRGQRGAGAGRPGNKKPATDLIEGRRAVAEALTVGIPLKNALVQAASGQK-D 127 Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAG-AQ 196 + R + V L S H GV + + + + +AG A Sbjct: 128 QEIEALARQLEQEGIPVERVARPVLDSLSSHGAHQGVIVRTQPFAYADLSEIIQRAGSAN 187 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGA-AIRTAEGGAEHVQPITG 255 V+ L++ ++ N G ++RS G GVV+ +A G A +T+ G H+ Sbjct: 188 ALVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGVGAYKTSAGAVLHLPIAQV 247 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 N+ L++ + AG+ ++ + +++ + ++ LV+G E G+ + D Sbjct: 248 SNLPRALEELKAAGFWTCGSTEHATQSVWEAPMGGRLALVMGSEGSGISRLMLEKCDFTC 307 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQNK 344 K+ G V LN++ AT V+ EW R+ + Sbjct: 308 KLPQFGQVESLNVAQATTVMCYEWLRRTQ 336 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 106/248 (42%), Gaps = 12/248 (4%) Query: 102 RQRAEETRVYGENACQALFQSRP-EAIVRAWFIQSVTPRF--KEALRWMAANRKAYHVVD 158 R+ + V G +F+ P +++ + +S + ++ L+ + N V+ Sbjct: 29 RRERDVFIVEGIR----MFREIPVDSVDEIYMSESAYAEYCDEDDLQELY-NAAEVTVMS 83 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC 218 ++ S T+ G +++ + ++ + L L+ +P N+G + RS Sbjct: 84 DSVFAGVSQTKTPQGCMAVVRCFHYEMTD--IAGSTDTATYLILDTIQDPGNMGTIFRSA 141 Query: 219 AHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 G+ GV++ + + +R+ G V + D+++ +D ++ G + Sbjct: 142 EAAGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDDLIYTIDALKRKGVLIYGAHL 201 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + L+ T P K+ ++G E GL A D D ++I G V LN +++ +L Sbjct: 202 DGEE-LYDTEFPDKIAFLIGNEGNGLSKAVSDTADRLLRIPMEGKVESLNAAISATLLSY 260 Query: 338 EWWRQNKA 345 E RQ ++ Sbjct: 261 EAMRQRRS 268 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 13/293 (4%) Query: 60 RDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQAL 119 +++K + ++A G K+ RR R E ++G + Sbjct: 2 KNKKTNQAGSGVQAKADRGAPRRDNKSAGQDKKAATQD---RRIRFSEDLIWGIHPIVEA 58 Query: 120 FQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT-KASGTEHHGGVCFL 177 + P I + +F E + A + +D L + + H GV Sbjct: 59 LKYEPNRISEIIAQKDRRGAKFDEIVELARAAKVKVTFIDSISLQGDGAASARHQGVIAK 118 Query: 178 IKKRNGTTVQQWVSQ------AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QD 230 + + + ++ + G + ++ ++ +PHNLG ++RS G GV++ ++ Sbjct: 119 VTQADLMDFADFLQKFKDAVDRGEKPRIIVCDSLQDPHNLGAIVRSALASGAIGVLLTRE 178 Query: 231 AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT-SSEQGKPLFKTSLP 289 + G A +++ G H+ N+V L + ++ G V LF L Sbjct: 179 RSAPLGGTAAKSSAGAISHMDICQVTNLVKSLAELKKVGAWVFGAIKDADAVSLFDADLN 238 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +V+G E G+ R D+++ I G + LN SVA V+L E RQ Sbjct: 239 VPACIVVGSEGTGIRPLVRRECDIQLSIPMVGELDSLNSSVAAAVILFEAMRQ 291 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 101/244 (41%), Gaps = 7/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT 163 ++E ++G A + I + + + ++ + + V A+L Sbjct: 2 SKENPIFGSKAVLEAILAGK-TIDKIFIDKDTKNADYQSIFNAIRYKQIPCSRVPVAKLN 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 K +H G+ L+ T+ V + G ++ L+ ++ NLG ++R+ Sbjct: 61 KLVPL-NHQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVC 119 Query: 221 FGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G +V+ + A++T+ G H+ N+ ++ + +G V+ + Sbjct: 120 VGAHALVLPKQGSASLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACHEKT 179 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +++ L ++LG E +G+ + D++ I G ++ LN+SVA ++L E Sbjct: 180 QTSIYQVKLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYES 239 Query: 340 WRQN 343 +RQ Sbjct: 240 FRQR 243 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 13/239 (5%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + +YG+N+ ++ I + + + + + A K + E+ + Sbjct: 2 KNLIYGKNSVLDALKAN-FPIAKIYLQKGLVNK--------AITFKNIEYLSIQEMNQLV 52 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 +H G I + + VL L++ +PHN G ++R+ FG+K + Sbjct: 53 KNGNHQGYIAEIYNYQYYDLGTIFKD--KPNLVLMLDHIQDPHNFGAIIRNANGFGIKHI 110 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT-TSSEQGKPLF 284 ++ + A + ++ + G ++ I ++ + L + ++ G+ + + T ++ L Sbjct: 111 IIPKNRACEVTPTVLKISSGAFTEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKATKLH 170 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 KT L++G E G+ +D V I+ G V LN++ AT VLL E ++N Sbjct: 171 KTKFATPTCLIVGNEESGVSHTLIKHSDALVYIEQKGTVQSLNVASATAVLLYEATKEN 229 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 228 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 50/260 (19%), Positives = 105/260 (40%), Gaps = 27/260 (10%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEAL-------RWMAANRKAY 154 R++ + V G + ++ +S+ + E + R +A N K Sbjct: 25 RKKNHQFVVEGIKLVDEALEYGK--VLEVVCAESL---YNELISGDLSGNRLLAENDKNI 79 Query: 155 H----------VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQ-WVSQAGAQD---CVL 200 VV + S T+ G+ + + + + + ++ QA ++ +L Sbjct: 80 TNYVKKGSSLLVVSDTVFKSMSETKTPQGILAVAEMPDYRLLDKGFLEQAYTKNGKIKLL 139 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIV 259 LE+ ++P NLG +MR+ GV GV++ + + + +R+ G + +++ Sbjct: 140 VLEDTADPGNLGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVEDLK 199 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 + + +++G + T + K + +++G E GL D D D V I Sbjct: 200 ETIKELKKSGISFYATHLKGEKSYKDIKYSGRSAIIVGNEARGLSDEVADLADTYVLIPM 259 Query: 320 TGNVAGLNISVATGVLLGEW 339 G V LN +VA +++ E Sbjct: 260 QGKVESLNAAVAAALMMYEV 279 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 15/243 (6%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R + V G+ + ++R I + + + N K ++ Sbjct: 23 RDKNGLFFVEGKKQIYEIPKNR--TIKQIFISEKYKNDV--------TNLKNVIMLSNHL 72 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 +K S T+ G+ +++K+ V+ + +G + LEN +P NLG ++RS F Sbjct: 73 FSKLSATKSPQGIMAIVEKK-YYAVEDIIKNSG---LFILLENIQDPGNLGTIIRSADAF 128 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G K V V A + S IR G H+ I NI N L+ + +V S + Sbjct: 129 GAKAVFVSKGSADIYSDKTIRATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGE 188 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K L P K V+G E GL + D VKI GN LN + A +++ E Sbjct: 189 KYLNDIKFPNKSAFVIGNEANGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAA 248 Query: 341 RQN 343 + Sbjct: 249 KNR 251 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 18/242 (7%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 RQ + V GE+ R +V+ +S +P+ L M + + Sbjct: 24 RQETGQFLVEGEHLVDEAI--RAGRLVQLIMAESYSPKGTWRLEDM-----PVLELSDHV 76 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 S TE GV ++K T V++ + + VL L+ +P NLG M+R+ Sbjct: 77 ADLLSETEKTQGVFAVVKM---TPVERKMKK------VLVLDRVQDPGNLGTMIRTADAA 127 Query: 222 GVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G V++ + + +R +G HV + +++ L + ++ G+ V T+ + Sbjct: 128 GFDTVLLGKGTVDPFNAKVVRATQGSLFHVNVTSV-DLLEKLPELKEDGFHVYGTALSKA 186 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + K+ LV+G E +G+ D RV I G+V LN +VA G+L+ Sbjct: 187 TSYEQVAFEEKVALVIGNEAQGVHADVLALCDTRVHIPVLGDVESLNAAVAAGILMYRIA 246 Query: 341 RQ 342 Q Sbjct: 247 LQ 248 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 105/234 (44%), Gaps = 14/234 (5%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + V+G+N+ + I + + + + + Y +D L K + Sbjct: 2 KKIVFGKNSVLEAIEYE-FPIEEIYLQKGL------VNNNLKFKKVVY--LDRNSLDKLT 52 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 +H G +K + + VL L++ +P N G ++RS FG K + Sbjct: 53 ENGNHQGYAAKLKDFQYHDLGSIFKDGSDK--VLILDHIQDPQNFGAIIRSANVFGFKHI 110 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQGKPLF 284 ++ D A + + ++T+ GG ++V+ I +++ + +++ + G+ + ++ +Q K L Sbjct: 111 IIPKDRACDVTPSVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQQAKKLN 170 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG-NVAGLNISVATGVLLG 337 K+ +++G E G+ +D + I+ +V LN+SVATG+LL Sbjct: 171 DAKFNEKIAIIVGNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLY 224 >UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A8F2F0_RICM5 Length = 256 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 95/228 (41%), Gaps = 7/228 (3%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 YG++ + + I + + K+ + ++Y +V+ L+K Sbjct: 30 YGKHPVFSALNNPKRQIDNILCTREIFDTNKKLI-----GTRSYEIVNNDILSKLLENHT 84 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ- 229 H G+ I+ ++ + + + L+ ++ N+G ++RS A F + +++ Sbjct: 85 HQGIAAKIRPIFSYNLED-IDITNPKCKIAILDQITDTQNIGAIIRSAAAFDINAIILPQ 143 Query: 230 DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 D + ESG + A G E + I N+ + ++ ++ G+ ++ + + Sbjct: 144 DNSPNESGGIAKAACGTLELIPIIKVTNLRSCMNYLKKHGFWIIGLTGSANDYFTDKLIS 203 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 K+VLV G E +G+ + D KI + V LN+S A ++ Sbjct: 204 DKIVLVFGSEDKGIRRLVAETCDYLAKIPISQRVESLNVSNAASIIFH 251 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 103/245 (42%), Gaps = 7/245 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANR-KAYHVVDEAELT 163 E ++G A +S ++ R W ++ + E L + N+ A+ V L Sbjct: 2 EETVTIFGIRAILEAIESGK-SLDRVWLLKGTQSKLFEQLLHVLRNKNIAFSFVPVERLD 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 + S +++H G I + ++ + + + L+ ++ N G ++RS A Sbjct: 61 RFS-SKNHQGAVARIGALSTQDMEPLIESVLKEKENPVFVLLDGVTDTRNFGAILRSAAA 119 Query: 221 FGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV V + + +G ++T+ GGA V ++ +V+ + + + + Sbjct: 120 TGVDAVFISSTGSAPLNGDVVKTSAGGAFKVPISKVQHLKDVVYYLKAHDIPTLGITEKS 179 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + L+ + L + LV G E G+ + D + K+ T V LN+SVA V+ E Sbjct: 180 TETLYDSDLKGPLALVFGAEDVGISNGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYET 239 Query: 340 WRQNK 344 RQ + Sbjct: 240 IRQRR 244 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 10/245 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV-VDEA 160 R R + G + Q F+S A+ + L +A A V Sbjct: 26 RDRTGLFIIEGVHLVQEAFKSSA-AVQCVVYNSERG--IPHELEQLAREGGAEWVQATTQ 82 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 + K +GT+ V +++K + V+ L+ +P N+G ++RS Sbjct: 83 VMAKCTGTDTPPPVFAVLEKLKRDDTALF----RNNSLVVVLDGVRDPGNVGTIIRSADA 138 Query: 221 FGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G VV+ ++ L + +R+ G H+ I ++ +L + + G +V TS + Sbjct: 139 VGADAVVLGKGSVDLYNPKTVRSTMGSLFHLPIIEA-DLAELLPEAQSKGIKLVGTSLQA 197 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + A L++G E EGL DA R D V I G LN+++A VLL E Sbjct: 198 THTCYTYDWTAGTWLLMGNESEGLSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEA 257 Query: 340 WRQNK 344 RQ K Sbjct: 258 VRQRK 262 >UniRef50_Q73J63 RNA methyltransferase, TrmH family n=1 Tax=Treponema denticola RepID=Q73J63_TREDE Length = 255 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 ++ +E V G +C AL + PE I R +F + +F E +++A+N++ Y +V + E Sbjct: 3 KKFEKELPVCGFESCLALAKHHPEKISRLFFSEKRAKQFGEVCKYLASNKRLYRIVSDDE 62 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTV--QQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 L K S + HH GV +I + + ++ A ++ VL L+ N +NLG ++RS A Sbjct: 63 LEKLSESVHHQGVTAMIFEPEIPVLEHEEINLWAQNKEHVLMLDEIGNANNLGAIIRSAA 122 Query: 220 HFGVKGVVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 FG++ +V+ +D + +A R A+GG E V+ + L R T + T Sbjct: 123 FFGIENIVLTKEDKQASITTSAYRVAQGGMEFVKIFKVSSTAWFLRQCRGR-LTCIGTDL 181 Query: 278 EQGKPLFK----TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 + V+VLG E G+ + A+ +KI G+GNV LN++ A Sbjct: 182 RAHHEIADLGRLIEKDEACVIVLGNEERGISEEAKKLCVHLIKIKGSGNVESLNVAQAAT 241 Query: 334 VLLG 337 + Sbjct: 242 LFCH 245 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 58/289 (20%), Positives = 102/289 (35%), Gaps = 10/289 (3%) Query: 65 EDSPWRTVSRAPGDETPEKADHG--GISGKSFIDPEVLRRQR-----AEETRVYGENACQ 117 + +P A G + D + +R R + + G A Sbjct: 6 KRTPRGGKQAASGSRPIRRYDRAAAPKGQRDRTQAARPQRNRDNVQAPKGEFIEGRRAAA 65 Query: 118 ALFQSR-PEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCF 176 ++ P + + A V A+L S H G+ Sbjct: 66 EALRTGFPVKCALIAEGGERDAALSRLVDDLNAAGVRIKYVPRAQLDALSSHGAHQGIAL 125 Query: 177 LIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALL 234 + V + +AG V+ L++ ++ N G ++RS G GV++ + A Sbjct: 126 EVGNFPYADVADILDRAGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAAGVIIANKRAAG 185 Query: 235 ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVL 294 + + +T+ G H+ NI LDD + AG+ V S + ++ L Sbjct: 186 VTVGSYKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVSGASERAEGSCWDAPFEGRVAL 245 Query: 295 VLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 V+G E +G+ + D K+ G LN++ AT L EW R+N Sbjct: 246 VMGSEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATTALCFEWLRRN 294 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 94/248 (37%), Gaps = 12/248 (4%) Query: 101 RRQRAEETRVYGENACQALFQSRPEAIVRAWFIQ----SVTPRFKEALRWMAANRKAYHV 156 R++ +E V G + + +V+ + + + E ++ + + + Sbjct: 37 ERKKNKEYVVEGVRMVSEV---PADLLVKIYMSERFHSNNPEYVHELVKKQGISSDSIEI 93 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 V + + S T+ G+ +++ ++ + ++ +EN +P NLG ++R Sbjct: 94 VADNVFDRMSQTQTPQGIMAVVRMKDSSISDMLTD----NPLLILVENLQDPGNLGTILR 149 Query: 217 SCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 GV GV++ + + + IR+ G V + + + + + AG V Sbjct: 150 MGEGAGVTGVIMSSNTVDIYNPKTIRSTMGSIFRVPFVYVQDFSDAVSQCKNAGIKVYAA 209 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + ++G E GL + D ++I G V LN ++A +L Sbjct: 210 HLDGKNTYLGEDYREGTAFLIGNEGNGLTEDITKQADTLIRIPMQGEVESLNAAIACTIL 269 Query: 336 LGEWWRQN 343 E RQ Sbjct: 270 TYEAVRQR 277 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 13/238 (5%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 +V G N +S + + + ++ PR KE + + VV +L K + Sbjct: 1 MKVMGINGVMEALKSGK--VNKIFVLKDATNPRIKEIVALAKKKKIP--VVYTPQLPKEA 56 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 GV I V + + +L L++ +P N+G +MRS FG G Sbjct: 57 -----RGVMAEISPIEYKEVDTIIDKCIREGSFILFLDSVEDPQNMGAIMRSAEFFGCAG 111 Query: 226 VVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 VV+ + + + + G H+ +N+ N+L ++ G TVV + G+PL Sbjct: 112 VVIPKRRCVQVNETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLD-GEPLR 170 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 L + +V+G E +GL + D KI+G G + LN+SVA +++ E+ R+ Sbjct: 171 NVDLSPPLAIVVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_C9RLF7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLF7_FIBSS Length = 371 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 77/347 (22%), Positives = 128/347 (36%), Gaps = 24/347 (6%) Query: 13 KVMYVRSDDDSDKRTHNPRTGKGGGRPG--------KSRADGGRRPARDDKQSQPRDRKW 64 + + R D +R R R G + R D RP+R D + Sbjct: 30 EAKFNREHPDEPERAPERREFSQERRGGIGSQAHLRRDRDDFANRPSRFDSDRP----SF 85 Query: 65 EDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRP 124 D P R E E D + ++F+ P V A + V G + L P Sbjct: 86 GDRPKRIEGERNFGERRE-FDKSRANQENFV-PAVGDADAAPQVAVGGIKEVEELLNKNP 143 Query: 125 EAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKR-- 181 + R F+ +S P+ E + VD L + H GV L+ ++ Sbjct: 144 LQVHRVLFMHKSGNPKLYELQKLAKRAHVHVQQVDSKILDSYARPNH--GVVALMNEKEL 201 Query: 182 -NGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLES 236 N V++ +A G + + N +P NLG +RS GV +++ + Sbjct: 202 LNWMDVREEFFKARDTGEKKLIAVATNIEDPRNLGACIRSSLALGVDILLLPAKGMCGIT 261 Query: 237 GAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVL 296 + RT+ G E ++ DN+ + + + AGY ++ ++ L +VL + Sbjct: 262 PSVARTSAGALEKLRICRPDNLEGAIGELKMAGYQILGLDADTETNLAGFDFADHVVLAV 321 Query: 297 GQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 G E GLP + D ++I N SVA + L E+ R Sbjct: 322 GGEDVGLPPFIKKQCDAVLRIPMKPEAHSYNASVALSLGLYEYARLR 368 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 8/249 (3%) Query: 100 LRRQRAEE--TRVYGENACQALFQSRPEAIVRAWFIQSVTP--RFKEALRWMAANRKAYH 155 +RR + +YG NA + R R + + R + Sbjct: 1 MRRLQPGRPSEYLYGRNAVAEALRGR-RRHRRLFVASGIETHGRIVALMEAARVRGIPVI 59 Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 V+ +EL + G+ +H GV + A VL L++ +P N+ ++ Sbjct: 60 VIPRSELDRMVGSVNHQGVVLETSPYPYVDFATLLDPAPE-SIVLLLDHLQDPQNIATLL 118 Query: 216 RSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+ GV+GVV+ + + A + + G EH+Q N+ +D R+ GY +V Sbjct: 119 RTAEAAGVRGVVLPERRAAGITPAVVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVA 178 Query: 275 TSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 + LF+ LP +VL++G E GL D++V I G + LN +VA Sbjct: 179 LEPGPNAQSLFRAPLPLPLVLLVGAEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGS 238 Query: 334 VLLGEWWRQ 342 + L E R+ Sbjct: 239 IALYEIVRR 247 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 9/212 (4%) Query: 134 QSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA 193 + + + E L N Y +V + S T+ G+ +IKK +++ + Sbjct: 77 EKLNRKVLERL-----NETGYEIVSDNVFKSVSDTQTPQGILCVIKKPEYA-LEELIK-- 128 Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQP 252 G Q +L LE+ +P NLG M+R+ G+ GV++ Q L + IR+ G V Sbjct: 129 GEQTHLLILESIQDPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKTIRSTMGSIYRVPF 188 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 ++ + ++ V + + K ++G E GL D D D Sbjct: 189 FITKDLAGTISSLKEQQVNVYAAHLKGTLSYDEPDYKKKTAFLIGNEGNGLSDEIADLAD 248 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 +KI G V LN +++ +L+ E RQ + Sbjct: 249 TYIKIPMQGQVESLNAAISASLLMYETGRQRR 280 >UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Neorickettsia RepID=C6V4C7_NEORI Length = 243 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 102/241 (42%), Gaps = 6/241 (2%) Query: 104 RAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELT 163 + E+ ++G++A A ++ I+ + + + L + + ++ Sbjct: 2 QQEKIVIFGKHAAVAAIKNPERNILSIFIAREKKAVYLPLLER--SRLPNISFCENTQIA 59 Query: 164 KASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 K G + H G+ + +K + ++ + + V+ L++ ++P N+G ++RS FG Sbjct: 60 KICGRDALHQGIAVITEKLSQPELRDVLKNTNKRSLVMILDSITDPFNVGNILRSSKAFG 119 Query: 223 VKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V +VV+ + I +TA G E + T N+ N + ++ GY Sbjct: 120 VDAIVVKQRHSPSETSVIAKTASGALESIPVCTIANLTNAIKILQENGYFCYAMDGGASS 179 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG--NVAGLNISVATGVLLGEW 339 L + P K+ VLG E +G+ + D + I N +N+S A + + ++ Sbjct: 180 KLTEIRFPNKVAFVLGSEGKGISHLLKTRCDQTLSIPMYADKNFDSINVSNAAAIAMFKF 239 Query: 340 W 340 + Sbjct: 240 Y 240 >UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ1_HIRBI Length = 272 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 111/269 (41%), Gaps = 9/269 (3%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 AD+ + K+ P ++ E ++G +A + ++ +RA+F ++ Sbjct: 6 RKQSFADNTKKNYKNQKKPT-YQQLPEGEVWIWGVHAVASALKNNSRKKIRAFFTRNGAQ 64 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + + + D ++ K + H GV ++ +G + + A + Sbjct: 65 KLGLDAEHLPHYA---QLADPKDIDKLVPPDSVHQGVVLHARELDGVDFEDVL--ANGEG 119 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGD 256 ++ L+ ++P N+G + RSCA FG K V++Q G A+ + A G + + + Sbjct: 120 PIVILDQVTDPQNVGAVFRSCAAFGAKAVIMQTRNSPNLGGALAKAAVGAIDIIPEVAVV 179 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFK-TSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 NI + AG+ VV + + PA + +V+G E G+ Sbjct: 180 NISRAVTALSDAGWWVVGMDGNTEIDIAQAFDTPAPLAIVMGAEGSGIRPLIAKGCSQLA 239 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQNK 344 KI + + LN+S A + L E RQNK Sbjct: 240 KISISPQMESLNVSSAASIALYEANRQNK 268 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 13/253 (5%) Query: 101 RRQRAEE--TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV- 157 R+ R E+ V G + + +S E + + R +A + +A V+ Sbjct: 23 RKGREEQQRFLVEGAHLVEEALKSGAEVVTVIY--DQQRDMDPACQRALANHPEAVQVIA 80 Query: 158 -DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGG 213 E L K S T+ G+ +KK +WV Q + +L L+ +P NLG Sbjct: 81 APETVLAKLSETKSPQGIVAEVKK-TAADWAKWVDQKREEQGSLLLLFLDEIQDPGNLGT 139 Query: 214 MMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++R+ + GVV+ ++ + +G +R G + T ++V+ D+++ G V Sbjct: 140 ILRTAEAAAIDGVVLGSGSVDIYNGKVVRATMGALFRIPVFT-QSLVDTADEWKAKGGRV 198 Query: 273 VTTSSEQ-GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 + +S EQ + LV+G E G+ D V I G LN +VA Sbjct: 199 LISSLEQNSVSYDEADYAGLTALVIGNEGRGVSKEMFAKADQFVHIPLYGGAESLNAAVA 258 Query: 332 TGVLLGEWWRQNK 344 G+ + E R+ + Sbjct: 259 AGIFVYEAQRKRR 271 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 93/254 (36%), Gaps = 19/254 (7%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR------FKEALRWMAANRKAYHVVD 158 A + VYG + L R I + S R + + Sbjct: 2 ATQRLVYGVGPVEELLGRRAREIAVLYVNPSRRSRQRAGDPVAAVAEQARRRGVSVEELS 61 Query: 159 EAELTKAS---------GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNP 208 +L G HH GV L+ ++ ++ + +AL++ ++P Sbjct: 62 REQLDALVAGRGDAEDGGRVHHQGVVALVGAFEYAALEDLIAAPRQRPALFVALDSVTDP 121 Query: 209 HNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 HNLG ++RS G GV++ D A SG + + G E + N+ L+ +Q Sbjct: 122 HNLGAIVRSAHVLGADGVILPKDRAAQVSGVVTKVSAGATEQIAIAQVTNLARALEQLKQ 181 Query: 268 AGYTVVT-TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG-NVAG 325 A + + E L + LVLG E GL D ++I G V Sbjct: 182 AEVWIAGLAAGEGATSLPAFDATGALCLVLGAEGTGLRPLVARTCDFLIEIPMLGAGVGS 241 Query: 326 LNISVATGVLLGEW 339 LN+SVA GV L E Sbjct: 242 LNVSVAAGVALYEV 255 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 11/243 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEA-LRWMAANRKAYHVVDEA 160 R R +E + G + S I + + + T R + L + + V + Sbjct: 24 RIRRKEFIIEGFRFVKEAINSE-FYISQIFLSEYFTNREERFFLERNNKVKCPIYFVTDE 82 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 L S TE+ G+ ++K + ++ Q + + +P N+G ++RS Sbjct: 83 ILRSISCTENPQGIIAVVKNKE-------LNIKDEQGFYILADRIQDPGNMGTIIRSAHA 135 Query: 221 FGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G G++ + + + +R G ++ I +N+ V RQ G+ ++++S + Sbjct: 136 SGALGIITTKGTVDVYNEKTLRATMGSIFYIPIIQDENLEKV-STLRQMGFKLISSSLDS 194 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + L K+++ +G E GL + +D+ V I GN LN +VA +++ E Sbjct: 195 DINFYDMDLRGKIIIAIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEV 254 Query: 340 WRQ 342 RQ Sbjct: 255 VRQ 257 >UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Acetobacteraceae RepID=Q0BV71_GRABC Length = 441 Score = 223 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 85/336 (25%), Positives = 136/336 (40%), Gaps = 24/336 (7%) Query: 13 KVMY--VRSDDDSDKRTHNP-RTGKGGGRPGKSRADGGRRPA-RDDKQSQPRDRKWEDSP 68 + + R + +RT P R +GG RP R+ R A R D+ ++ R R Sbjct: 121 RPRFEAPREEQSFGERTERPTRHRQGGERPSGGRSFRPRDGANRSDEHAERRPRSDHSRS 180 Query: 69 WRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIV 128 T P E P ++ G++ P ++G +A +A ++ + Sbjct: 181 DTTAQAQPAAERPSRSG-----GRALQAP-------VGAVWLHGLHAVEAALRNPARRLR 228 Query: 129 RAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQ 187 R + E L + A + + GTE H G+ L K + Sbjct: 229 RLLLTEEAEATLAERLP--PPWALVAERTERAHMDQLLGTESVHQGIALLADKLPSPPLG 286 Query: 188 QWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGG 246 + ++Q VL L+ S+P N+G ++RS A F V+VQD E SG + A G Sbjct: 287 EILAQ--RPGPVLVLDQVSDPRNVGAILRSAAAFQACCVIVQDRNAPEESGTMAKAASGA 344 Query: 247 AEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPD 305 + + + NI L + A VV +E PL +L ++ LV+G E +GL Sbjct: 345 LDRLPMLRVVNIARTLAALKAADLWVVGLDAEGA-PLSGPALGKRRVALVMGAEGDGLRR 403 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 R+ D V + + LN+SVAT + L E R Sbjct: 404 LTRESCDEIVSLAMAEGMESLNVSVATAIALYEISR 439 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 53/248 (21%), Positives = 101/248 (40%), Gaps = 10/248 (4%) Query: 101 RRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA 160 R+ V G C+ L PE + + ++ + +WM R V + Sbjct: 22 ARREEGMYVVEGLRMCREL---NPEDVDALYVTENFAGD-ADNRKWMGRFRP--ETVSDV 75 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSC 218 + + T+ GV +++++ T+ V A G ++ LE +P NLG ++R+ Sbjct: 76 VMNVMADTQTPQGVLAVVRQKRY-TMDDIVKPAPDGRSLAIMVLETIQDPGNLGTIIRAG 134 Query: 219 AHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 G+ G+V+ D A + + IR+ G + + D++ + + G + Sbjct: 135 EGAGITGIVMNHDTADIYNPKVIRSTMGSIFRMPFVYADDLQDACLLMKNRGVRLFAAHL 194 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + + ++G E GL + D VKI G V LN ++A VL+ Sbjct: 195 KGMNNYDQEDYTDNVGFLIGNEANGLTEETTSLADCLVKIPMEGKVESLNAAIAASVLMF 254 Query: 338 EWWRQNKA 345 E RQ ++ Sbjct: 255 ETARQRRS 262 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 4/240 (1%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTK 164 + G +A + ++R + T + + A + V + Sbjct: 2 STIWIGGIHALRQALNDG--NLLRLEVSEGKTSKNLASLVADAKAAQIEIITVPRHYIDH 59 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G+ + + Q + +L L++ +PHNLG +R+ GV Sbjct: 60 RLPDVRHQGIAGECRLSAQASNWQQAISGVERPFILVLDSIQDPHNLGACLRTAMAAGVD 119 Query: 225 GVVVQDAALLESGAAIRT-AEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 VV+ ++ + +R A G AE + N+ ++ ++ G VV + E K L Sbjct: 120 AVVLPNSCAADITPVVRKIACGAAEALAIFRVANLKREVEMMKEKGLWVVGGAGEAEKSL 179 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 F L +V+++G E +G+ R D I + LN+SVA G++L E RQ Sbjct: 180 FDLDLSGGLVMIVGNEEKGIHYGLRQTCDWLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 13/238 (5%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 ++ + G+N+ ++ I + + +S + KE VV +A K Sbjct: 2 KKLYMCGKNSVIDAIKA-KLPIEAVYVLSKSHADKLKE-------FSNIKIVVKDASFFK 53 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 +E+H G +K N + V + VL L++ +PHN G ++R+ G+K Sbjct: 54 EYNSENHQGYLLFLKDFNYYEID--VIKKDNPKTVLILDHIHDPHNFGAIIRTANAAGIK 111 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT-TSSEQGKP 282 +++ D + + ++ + GG V+ I NI + ++ ++ G+ + + E P Sbjct: 112 HIIIPKDRSTDVTSTVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVP 171 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K LV+G E +G+ + D++V I G V +N+SVATG+LL E Sbjct: 172 YNKVQYAGNCALVVGNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFELV 229 >UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax=Ehrlichia ruminantium RepID=Q5FFT7_EHRRG Length = 249 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 109/244 (44%), Gaps = 6/244 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK--EALRWMAANRKAY-HVVDEAEL 162 ++ +YG++ C A Q+ ++ + +R ++ + Y V+ + Sbjct: 4 KKIWIYGKHPCVAALQNINRKCHELLVTENFIKHNNGIQKIRELSKQKNIYPKQVNINTI 63 Query: 163 TKASG-TEHHGGVCFLIKKRNGTTVQQWVSQAGAQ-DCVLALENESNPHNLGGMMRSCAH 220 +H G+ + + +++ +S + ++ L+ ++ +N+G ++RS Sbjct: 64 NSVLPPNSNHQGIALQVSIVDTVSIEDVLSNIPTEISTIILLDQVTDVYNVGSIIRSAVC 123 Query: 221 FGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 F V V++ + E+ +T+ G + + + NI N + ++AGY ++Q Sbjct: 124 FNVHAVILPYYNSPSENCGMSKTSSGAIDMIPIVYVVNISNAIHTLKKAGYWCYGFDAKQ 183 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 G+PL K L K +++ G E +GL ++ D +KI + + LN+S A + L Sbjct: 184 GEPLHKIKLDNKRLVIFGSENKGLRTLTKENCDFLLKIATSERIDSLNVSNAAAIALYSI 243 Query: 340 WRQN 343 + QN Sbjct: 244 FIQN 247 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 97/237 (40%), Gaps = 14/237 (5%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R +A + G + + +++ V Q+V P E +V Sbjct: 54 RDKAGRFLIEGFHLVEEALKAKFHIEVILMTEQTVLPLTWEVYE------NDIIIVSPQV 107 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 L + S TE G+ + ++ Q L ++ +P N+G M+R+ Sbjct: 108 LKEISETETPQGIAAVCAIPAPPSMTTLSGQ------FLLIDRVQDPGNIGTMIRTADAA 161 Query: 222 GVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G+ GVV+ + ++ L + IR ++G H+ I +++ ++ ++ V TS + Sbjct: 162 GMTGVVLGEGSVDLFNSKVIRASQGSIFHMPVIR-GSLIEWVEKLKEKNIPVFGTSLTEA 220 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + L++G E EG+ + +D + I G LN++VATG+LL Sbjct: 221 SSYTAIEPQPEFALIVGNEGEGVQSELLEGSDQNIYIPIYGQAESLNVAVATGILLY 277 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 93/243 (38%), Gaps = 17/243 (6%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R V G + +S E I + V + N K H + Sbjct: 23 RYEEGLFFVEGTTSVLEALKSNFE-IEYIVMGEGVK------IDIPTGNFKIVHTTER-V 74 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 K S T V +IK + + + + +N +P NLG ++R+ F Sbjct: 75 FKKISDTVTPQMVMAIIKIPKY----EEDTYIKDKGIYIIADNIQDPGNLGTIIRTADAF 130 Query: 222 GVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G + + + + + +R + G H+ I + +L +Q G V T + Sbjct: 131 GASAIFTINNCVDVFNPKVLRASMGSIFHIPVIVTAS--QILLKLKQRGIKVFATHLKAR 188 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K + + ++ K+ VLG E +G+ D D VKI TG LN+S+A G+ L E Sbjct: 189 KLVHECNISDKVAFVLGNEAKGVS--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQ 246 Query: 341 RQN 343 RQ Sbjct: 247 RQR 249 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 7/235 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 V G + + +S +F Q+ R + L + +N + ++ + + A TE Sbjct: 54 VEGVHLLEEAIRS-GLRFKTIFFSQAAEDRAGKLLPQIHSNVETL-LLPDEVFSSAVLTE 111 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 GV L+K + ++ + +L + +P NLG ++RS FG GV++ Sbjct: 112 SPQGVAALVKLKTFK-LEDLLRA--ENPMLLGVAGVQDPGNLGTILRSAEAFGATGVLIG 168 Query: 230 DA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 D A + IR + G + + + L+ R G ++ TSS +G+PL + Sbjct: 169 DKTASPWNPKVIRGSSGSVFRLPVVKVE-WPAALEQLRAKGVQILATSSHKGEPLPEVDF 227 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++++G E G+P D + I + V LN +A +++ E RQ Sbjct: 228 TGPTIVLIGGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQR 282 >UniRef50_B2S202 Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S202_TREPS Length = 319 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 16/266 (6%) Query: 91 GKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAAN 150 +S + E +R+RA T V G A + L PE I R +F RF ++AA Sbjct: 10 ARSQLSHEPPKRRRASLT-VCGLRAVETLGSIHPEKIHRFFFTPVRAKRFGPLCAYLAAR 68 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTV-----QQWVSQAGAQDCVLALENE 205 ++ Y + EL + + + HH GV I + V + WV + ++ V+ L+ Sbjct: 69 KRLYRSANTQELERLTQSVHHQGVAATIDEPRFPAVTHSQVEFWVQR---REFVVLLDRV 125 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQDAA--LLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 + HNLG ++RS A FGV +VV D + A R A+GG E VQ + N VL+ Sbjct: 126 GDAHNLGAIIRSAAFFGVHSLVVSDCRQQAQVTSATYRVAQGGMEFVQLLRCTNAQEVLE 185 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTS----LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 T V S + L + S ++LVLG E GL + D +I G Sbjct: 186 MCAGK-MTRVGASPHAFRSLTRLSNILSPEEAVILVLGNEETGLSEHLTAHCDHLCRIAG 244 Query: 320 TGNVAGLNISVATGVLLGEWWRQNKA 345 +G V LN++ A + L + ++ Sbjct: 245 SGQVESLNVAQAGALFLSTIVQLRQS 270 >UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=A4XKC2_CALS8 Length = 271 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 11/266 (4%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 K+ + + R+ + V G A + E I F Q + +++E Sbjct: 11 KSKENECVKRLKKLHDKKHREEFKVFLVEGVKAVKEALDYAIEDINLLIFSQEASKKYEE 70 Query: 143 A----LRWMAANR-KAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + + + + K V E S T GV + + + + Sbjct: 71 FFSRCISLLNSGKLKRIVQVPEKIFEHISTTTTPQGVLAEC-----SFFDKELDVLKKHN 125 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGD 256 V+ +++ +P NLG ++R FG + V+ + + + + +R+A G HV + Sbjct: 126 RVVVIDSVQDPGNLGTIIRCADAFGFECVITVNGTVDVYNPKVVRSAMGSMFHVDVVRER 185 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 VL+ + G+ + T+ + K S+ + +V+G E +G+ A + +VK Sbjct: 186 KKEEVLEALNKRGFALYVTTPYGDVDISKLSVDDRFAIVIGNESKGVDVAFLENATKKVK 245 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQ 342 I G LN +VA ++L E ++ Sbjct: 246 ISMPGKAESLNSAVAAAIVLYELRKK 271 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 2/167 (1%) Query: 178 IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLES 236 +K + + ++ + +L L+ +PHNLG ++R+ GV V+ D ++ + Sbjct: 27 VKALGEEVLDGILDKS-SNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGIT 85 Query: 237 GAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVL 296 +R + G AE V I N+ + + G + TS + + L++T LV+ Sbjct: 86 ETVLRVSVGAAEKVPFIQVTNLARTMKQLQSRGIWIFGTSDKGDRGLYETDFTGPAALVM 145 Query: 297 GQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 G E EG+ + D ++I G++ LN+SVATGV L E RQ Sbjct: 146 GAEGEGMRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQR 192 >UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desulfitobacterium hafniense RepID=B8FZK3_DESHD Length = 271 Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 6/246 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R+ E + G + + + + + + VDE Sbjct: 22 REENGEFLIEGWRFVEEGLARGAHLTKVFFCSECKNESWPQLAEALKVKGVPVIEVDERV 81 Query: 162 LTKASGTEHHGGVCFLIKKRNGT--TVQQWVSQAGAQ--DCVLALENESNPHNLGGMMRS 217 L K S TE+ G+ ++K+ T + V+ AG +L L+ +P N G ++R+ Sbjct: 82 LRKMSDTENPQGILAVVKQSRWTWDDFIEIVNPAGRSAIPMLLILDGVQDPGNCGTILRT 141 Query: 218 CAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 GV V + + + L + +R+ G + +T +L R V Sbjct: 142 ALAAGVTQVCLTEGTVDLYNLKVLRSTMGAIFSLNIVTHCQPEEILKVCRSHKIPVFVGD 201 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 E G L++T M LV+G E G A + P R+ I + V LN+++ATG++L Sbjct: 202 VE-GTDLYETHFAQPMALVVGNEGNGPSAAFQGPGVKRITIPMSHQVESLNVAMATGIIL 260 Query: 337 GEWWRQ 342 E R+ Sbjct: 261 YEVRRR 266 >UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=A8LF93_FRASN Length = 386 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 84/340 (24%), Positives = 128/340 (37%), Gaps = 11/340 (3%) Query: 5 MKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKW 64 ++GK G +R + +R G ++ GG+ D+ R Sbjct: 43 LQGK-GATPPAEMRPGHPAQRRA----AVSAAGTRAAAKRPGGQAADERDRPRAERGTGG 97 Query: 65 EDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQ-SR 123 HGG G RR +E V G NA + Sbjct: 98 SAGAVGAGRSGGHSGHGGNGAHGGHGGAGAPGAYGSRRVETDELVV-GRNAVVEALRAGV 156 Query: 124 PEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNG 183 P + R +A R A + EL + GT H G+ + Sbjct: 157 PATTLYIAGGLDFDERIADARRLAGRAGLAVVDIGRFELDRLCGTAPHQGLALSVPPFEY 216 Query: 184 TTVQQWVSQAGA--QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAI 240 ++ A A V+AL+ ++P NLG ++RS A FG GVVV + + AA Sbjct: 217 AHPDDVLAAAQAAAPGLVVALDGVTDPRNLGAVVRSAAAFGASGVVVPERRAAGVTAAAW 276 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQE 299 +T+ G A + N+ L F ++G VV +++ L + + +VLV+G E Sbjct: 277 KTSAGAAARLPVARAVNLTRTLRSFAESGLFVVGLAADGEVSLDELQVATDPLVLVIGSE 336 Query: 300 YEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +GL + DLRV+I G V LN VATG+ L E Sbjct: 337 GKGLSRLVGECCDLRVRIPMAGQVESLNAGVATGIALSEI 376 >UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWP6_PARL1 Length = 288 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 107/281 (38%), Gaps = 7/281 (2%) Query: 67 SPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQR-AEETRVYGENACQALFQSRPE 125 S + + G + A G G++ P + A + +YG +A A + Sbjct: 10 SARMSRRKQQGKFSNSSATSGSPRGRNGRSPAGGKGGGGANDAYLYGFHAVLAALANPAR 69 Query: 126 AIVRAWFIQSVTPRFKEALRWMAANRKAYHVV--DEAELTKASGTEHHGGVCFLIKKRNG 183 R ++ + A+ + +E H G+ Sbjct: 70 LAERLVLTRNAETELARQGARLPADLPVRLEIMENEDIAALLPAGAVHQGIALRASPLPD 129 Query: 184 TTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RT 242 V + V+ L+ ++PHN G ++RS A FG ++ + G + + Sbjct: 130 LDVVEACEGTNR---VVVLDQVTDPHNFGAILRSAAVFGAGALITTERNSPSLGGVLAKA 186 Query: 243 AEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEG 302 A G E V+ N+V +++ ++ G+ VV E L L ++ LVLG E G Sbjct: 187 ASGALELVRVARITNLVRAIEELKELGFEVVGLDGEGEASLPDLKLSPRVALVLGAEGAG 246 Query: 303 LPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L R+ DL ++ G + LN+S A V L E +R+N Sbjct: 247 LRRLTREHCDLLARLPAAGGMKSLNVSNAAAVALYELFRRN 287 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 97/246 (39%), Gaps = 17/246 (6%) Query: 97 PEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV 156 R + + G + Q +S W IQ + L A + Sbjct: 17 HRRKERLKTNTFLIDGIHLIQEALKSN-------WVIQELIVVEGYELPNDAKD-VPVAY 68 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 V E L + S T+ GV +++ + + ++ L+ +P N+G ++R Sbjct: 69 VSENVLKEISQTQTPQGVIAVVEMNIPKVQED-------NNLIILLDAIQDPGNMGTIIR 121 Query: 217 SCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 + GV VV+ D + + + IR +G H+ T + + + G+T++ T Sbjct: 122 TADAAGVDAVVLGDGCVDIFNDKVIRATQGSIFHIPIYTAT-LEQEIHMLQTQGFTILAT 180 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + + S+ K+ L+LG E G+ + + + R+ I G LN+ +A G+L Sbjct: 181 ALHDAVEYTEVSVHNKVGLILGNEGAGIAPSLLNKANQRINIPIYGKAESLNVGIAAGIL 240 Query: 336 LGEWWR 341 + + Sbjct: 241 MYHLKK 246 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 9/221 (4%) Query: 127 IVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT 184 + + +S RFKE + +V ++ S T+ GV ++K + Sbjct: 45 VSAVYMSESFFNDDRFKEEKKRFLDK---TEIVSDSVFKSMSDTQTPQGVLAIVKMPHY- 100 Query: 185 TVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTA 243 + + G + +L LE+ +P NLG M+R+ GV G+++ + + + +R+ Sbjct: 101 EIDELFK--GDKTELLVLESIQDPGNLGTMVRTGEGAGVSGIIMNRTTVDIFNPKTVRST 158 Query: 244 EGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGL 303 G V D++ ++ + G ++ + + ++G E GL Sbjct: 159 MGSLYRVPFYITDDLPETIEYAKSKGVSLYAAHLKGKCSYDRPDYTGACGFMIGNEGNGL 218 Query: 304 PDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 D D D ++I G V LN +++ +L+ E RQ + Sbjct: 219 SDEIADMADTYIRIPMEGAVESLNAAISATLLMYECNRQRR 259 >UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY01_SYNWW Length = 264 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 114/263 (43%), Gaps = 10/263 (3%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 D+ I + + + R+Q A + G+ + + P+ + + + + + E Sbjct: 6 SKDNKKIKYAARLKQKSFRKQEAC-FLIEGKKMLEEALK-HPKLLRQIFIEAELASEYTE 63 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 + +VVD+ + S TE G+ L + + + ++++SQ +L L Sbjct: 64 LYQQHPEWE--CYVVDKRLMKHISDTETPPGIVALCQIPSWSR-EEFLSQ---NAFLLYL 117 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + ++P NLG ++RS GV G+++ ++ S +R + GG ++ + ++ Sbjct: 118 DRIADPGNLGTIIRSGWALGVDGILLSPESVDPFSPKVVRASMGGIFNIPLLLDFSVDE- 176 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 L +Q YT S + + +F +L +G E +G+ + D KI Sbjct: 177 LKRLKQNAYTFFCASLQARQEIFSLDFTGPSLLAIGSESQGVRPVIEEICDFNCKIPIKP 236 Query: 322 NVAGLNISVATGVLLGEWWRQNK 344 V LN +VA +++ E W+Q + Sbjct: 237 GVDSLNAAVACAIIINEAWKQRQ 259 >UniRef50_A8ER65 tRNA methyltransferase, TrmH family n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ER65_ARCB4 Length = 229 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 43/236 (18%), Positives = 96/236 (40%), Gaps = 9/236 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG+ + ++ P+ + + + + + + K H +D + + Sbjct: 1 MIIYGKQIVLYVLENHPKLVEEVFLSKEIDNKLFSKFLKL---GKKIHRLDNQKAQALAK 57 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H G + + + +++ A + +L L+ ++ N+G + R+ G+ G++ Sbjct: 58 GGNHQGFFLKLSQFDYAPIKEL----KAMNFILVLDGVTDVGNIGAIARTAYSLGIDGII 113 Query: 228 VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ--GKPLFK 285 + + + +RT+ G + ++ + AG+T++ + + K K Sbjct: 114 ASNIKTINNSGIVRTSAGALLDLPFCIHPRSADLASELIDAGFTLIGATMDGVDLKKYGK 173 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 K+ L LG E EG+ DL+V I LN+SVA G+L+ R Sbjct: 174 IEKSDKVALFLGSEGEGISPKVAKKLDLKVSIKMEHEFDSLNVSVAAGILIYNLKR 229 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 102/242 (42%), Gaps = 5/242 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R + G+ + + + I + + +S ++ + + V+ + Sbjct: 23 RNELKVFVCEGKKMFEEVASQQRNQIKKVYLAESYYHQYTKQNPEYLK-GLDFEVLSDQV 81 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + +AS T G+ ++K+ T +G +L LE+ +P NLG M+R+ Sbjct: 82 MKEASETITPQGILAIVKQPIYTLKDM---TSGDSIRLLLLEDIRDPGNLGTMVRTAEGV 138 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G+ G+V+ +D+ + + IR+ G V ++ L+ + + + Sbjct: 139 GMTGIVLSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDFYACLNQIKNEEIAIYAAHLQGA 198 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K S K +++G E GL D A + R+KI GNV LN ++A VL+ E + Sbjct: 199 VWYDKVSYQGKSAILIGNEANGLSDKATSLSTQRIKIPMEGNVESLNAAIAAAVLMYESY 258 Query: 341 RQ 342 RQ Sbjct: 259 RQ 260 >UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma pulmonis RepID=Q98R32_MYCPU Length = 229 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 13/231 (5%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + + G+N+ ++ I + + S FK V D+ L Sbjct: 3 KLMLCGKNSVLDALENN-VKIEMLYVLASKVHEFKHI------KNIKIEVKDKQFLDSLV 55 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 E+H G ++K N ++ Q + +++ +L L++ +P+N G ++RS FG+K + Sbjct: 56 K-ENHQGYVAVLKSLNFVSLDQMIK---SKETILILDHLEDPYNFGAILRSANAFGIKNI 111 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGKPLF 284 + A+ + ++ + GG +++ ++I +D ++ GY + ++S + + + Sbjct: 112 IYPIKRAVDINSTVLKVSSGGFVNLRFYKSNSISATIDKLKKQGYWIYSSSLDPTSEDIN 171 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 K S VLV+G E +G+ + +D I G+V LN SVA G++ Sbjct: 172 KISFNNPSVLVIGNEKKGISQTTKKQSDQLFYIKTKGSVQSLNASVAAGII 222 >UniRef50_Q30P99 RNA methyltransferase TrmH, group 3 n=2 Tax=Campylobacterales RepID=Q30P99_SULDN Length = 226 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 8/229 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +Y + + Q P I + + + + + L + + K Sbjct: 1 MLIYAKQPINYIIQKHPTKIKKLYLAKEMDKKEYSQLMKIGFE---IKRIPPDAAGKMCK 57 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H G+ + + + +++ + VL L ++ N+G ++R+ GV GV+ Sbjct: 58 NASHQGILAEVDEYVLCNYKTFLN----YEFVLVLSGVTDVGNIGAIIRTAYALGVDGVI 113 Query: 228 VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 L A +RT+ G + N+++VL+D + +G+T + Sbjct: 114 ACGVKSLPIEAIVRTSTGALFDMPFAIEQNVLDVLNDLKMSGFTSYGADM-GATDIRDVK 172 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + K L LG E EGL D V I + LN+SVA +L+ Sbjct: 173 IKQKRALFLGSEGEGLTQRVSSKLDELVSIKMSHEFDSLNVSVAGAILM 221 >UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0516 n=21 Tax=Borrelia RepID=Y516_BORBU Length = 228 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 104/223 (46%), Gaps = 12/223 (5%) Query: 131 WFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIK-------KRNG 183 + Q +P+ KE + ++ EL K + H G +K K Sbjct: 3 FIYQKKSPKTKEIEQLAKTQNIKIIRINTNELDKILKNKDHRGFALKLKLEKNKNVKTQT 62 Query: 184 TTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAI 240 + + + +L L+ +P N G ++R+ F + V+ Q + ++ + Sbjct: 63 KDFENLLETFKKKENAFILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVL 122 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP-AKMVLVLGQE 299 RT+ G +++V+ +T NI N ++ + G+ + T + G+ + K + K+ L+LG E Sbjct: 123 RTSSGASQYVKKMTVTNINNTINLLKNYGFWIYTGDIK-GQDINKIKINDKKIALILGNE 181 Query: 300 YEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +G+ ++ +D ++I +G + LN+SV+TG+L+ E RQ Sbjct: 182 GKGVHKLIKENSDFLIRIPTSGKIDSLNVSVSTGILIFEIKRQ 224 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 114/358 (31%), Gaps = 60/358 (16%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K GR+ + + +R A T A + K P Sbjct: 3 KKGTGGHGRKRLAGKGPTPKASNRTYHQAYRDRIAAEKKATHTNAQRSRAAAKDHYRPH- 61 Query: 100 LRRQRAEETRVYGENAC-QALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHV 156 RA ++G N +A P R + ++ P+ + + +A+ Sbjct: 62 ---TRAGAELIFGRNPVSEAAVAGVP--FKRLFVASTIMKDPKLAKVVERASASGVPLRE 116 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWV-------------------------- 190 A+L + + H G+ + V + Sbjct: 117 CSAADLDRLTEGGVHQGIAAELCAYQYLDVMELWDLAVARAEAAGCAASAGCAVVSPAVH 176 Query: 191 -----------------------SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 ++AL+ ++PHNLG ++RS A FG GV+ Sbjct: 177 EVPSGVLGETPKSDLAPHETVATKPPTHPPLLVALDQVTDPHNLGAVLRSAAAFGADGVI 236 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + A + AA + + G A V N+ L D ++AG V+ L Sbjct: 237 IPEHRAASVNAAAWKVSAGAAAIVPVAQATNLTRALQDLKRAGAFVIGLDGGGDVALPDL 296 Query: 287 SLPA-KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L +V+V G E G+ RD D V I + LN +VATG+ L + + Sbjct: 297 QLTDVPLVVVTGSEGRGISRLVRDTCDQIVSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_C5EXS0 RNA methyltransferase n=2 Tax=Helicobacter RepID=C5EXS0_9HELI Length = 228 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 9/229 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 VYG++ + + I + + V F L+ +K +D + + Sbjct: 1 MVVYGKHIVELILLKYQYLIENIYLAKEVDKSFFGLLK---KTKKQIIKLDAKKAQAMAR 57 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H G IK S+ D VL L S+ NLG + RS GV G+V Sbjct: 58 GGNHQGYLLEIKPLEVLEF----SKIKEMDFVLVLCGISDVGNLGSIFRSAYALGVDGIV 113 Query: 228 VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 V + +R + G + N ++V+++ +Q+ +T+ TS QGK L Sbjct: 114 VCGIKDFKQEGVLRASSGAMLGMPFCVVHNPLDVINELKQSDFTLFGTSM-QGKDLQNA- 171 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 L K L LG E GL + D + I LN+ VA +L+ Sbjct: 172 LSGKKALFLGSEGHGLSNKILAKMDYNLTIPMKREFDSLNVGVAGAILI 220 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 98/244 (40%), Gaps = 11/244 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQ--SVTPRFKEALRWMAANRKAYHVVDE 159 R++ + + G R + + T +E +R + H V Sbjct: 25 RKKEGKFILEGYRLIMEA--CGKARFDRIFMTPYFAKTDEGEEIIRKFKDH-IPVHFVTG 81 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 L + TE+ G+ + + + + +L L+ +P N+G ++R+ Sbjct: 82 KLLYNVADTENPQGIAAIT--YVPRSGANILFHNRNRGIILILDRIQDPGNMGTIIRTAV 139 Query: 220 HFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA--GYTVVTTS 276 G++G++ ++ + + + IR + G + +TG + L R Y ++ T Sbjct: 140 AAGIEGIICLKGSVDIYNLKVIRASMGAIFSIPILTGVSFKR-LQKIRDEYPDYKLICTD 198 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 K + ++LV+G E G+ + D+++KI GN+ LN +V+T ++L Sbjct: 199 LNTSKFYHEIDYQEPLMLVIGNEARGIREELLSLADIKIKIPLMGNIDSLNAAVSTAIVL 258 Query: 337 GEWW 340 + Sbjct: 259 YDIV 262 >UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GVZ1_SORC5 Length = 248 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 5/242 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 VYG + ++ + + P+ R EL + S Sbjct: 4 LVYGLQPVREAIRAHGARVGWVLVQRDGGPKLDALARLAEGQGIPTERAPRNELDRRSAG 63 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS----QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G + V + Q GA +AL+ +P N G ++RS G + Sbjct: 64 GRHQGAVASAPELQIVGVDEIPVVEEGQPGAGTITVALDGVMDPQNFGAVIRSAVALGAR 123 Query: 225 GVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 ++ + + + A R + G EH + ++ + L+ G + ++ L Sbjct: 124 AILWPEHSSAPLTPATFRASAGAIEHARLCRVPSLPDALEALAARGVAAIALDAQGPVEL 183 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L + +V+G E +G + R ++ TG ++ LN SVA + L E RQ Sbjct: 184 GELPLTGPVAIVIGAEDKGTRRSVRRVCQHVARLPMTGPISSLNASVAGAIALYEVVRQR 243 Query: 344 KA 345 +A Sbjct: 244 RA 245 >UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodobacteraceae RepID=B6R0T8_9RHOB Length = 289 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 116/289 (40%), Gaps = 17/289 (5%) Query: 56 QSQPRDRKWEDSPWRTVSRAPGDETPEKADH--GGISGKSFIDPEVLRRQRAEET---RV 110 + + S W S G++ P K G SG SF + +++ A E + Sbjct: 2 SNFKNQKSTGGSRW---SPTQGNDRPYKKKRPDGKSSGGSFSKGKPWQKKSAAEDGPFYI 58 Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT-E 169 YG + +A F++ + Q+ R +E + ++ K G Sbjct: 59 YGLHTIEAAFKNPERKRHKLVVTQNALRRLEERNLKI---DVPVEDASPRDIDKLVGKDA 115 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 H G L+ ++ VLAL+ ++PHN+G ++RS VV Sbjct: 116 VHQGAALLVDALPEYGPEELKDGQ----LVLALDQVTDPHNVGAILRSAVALNADAVVTT 171 Query: 230 DAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 E G + +TA G + ++ + N+ +++ R GY + SE + + T+ Sbjct: 172 RRHAPEEGPVLAKTASGALDMIKHVRIQNMSRFVEEMRDKGYQAIALDSEGPEAVENTAF 231 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 K +LVLG E +G+ + R D ++D G + LN+S A + L Sbjct: 232 TDKTLLVLGSEGKGVREGVRKSCDTLARLDMPGEIKSLNVSNAAILSLY 280 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 47/263 (17%), Positives = 100/263 (38%), Gaps = 30/263 (11%) Query: 106 EETRVYGENACQALFQSR--------------------PEAIVRAW-----FIQSVTPRF 140 + ++G + A ++ + IV + ++ + Sbjct: 9 NRSWIWGRHLVSATIHAKYWIPLELHYDSHRFSPHDPLGDPIVGDFPLGDSIEEAHSTSL 68 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 K + A +L++ E H G+ + + + QA ++ Sbjct: 69 KNLCEAVGIQLVA---STADQLSRLIRAEDHQGLAARMPEFPYADFEGLF-QAQLPALLV 124 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIV 259 L+ + NLG ++R G G+V+ + + A R++ G + + Sbjct: 125 ILDGIQDSFNLGAIIRCAEALGAGGIVLPEKGQSGVNSQAARSSAGAVNFLPIYRVPALD 184 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 +D + G ++ + + + L+ +PA + L++G E +G+ A D++V+I Sbjct: 185 RAIDQLKSRGMKILAATEKSEQSLWNVVIPAPLCLIIGNEGKGVSSALLSACDIQVRIPM 244 Query: 320 TGNVAGLNISVATGVLLGEWWRQ 342 G + LN +VA G+LL E RQ Sbjct: 245 AGQTSSLNAAVAAGILLAEIQRQ 267 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 12/227 (5%) Query: 119 LFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLI 178 L ++++ + + R + ++ + + S TEH G+ L+ Sbjct: 39 LLDLPASSLLQLYVQEDYK---GALPRGIEKEDSRICILSKKAMESISTTEHGQGILGLL 95 Query: 179 KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESG 237 + + D L LEN +P NLG + R+ GV + + + S Sbjct: 96 RFPK--------KEKPKGDLFLILENIQDPGNLGTLFRTAEAAGVNHIFLSRNTVDPFSP 147 Query: 238 AAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLG 297 +R+ G + +++ + + + AG V + K F+ + + G Sbjct: 148 KVVRSTMGSLFRLPFSIEEDLFFLCESLKSAGVQVFALDLDGKKTHFQAAFQGPSAFLFG 207 Query: 298 QEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 E GL ++ I G + LN++ + ++L E RQ + Sbjct: 208 NEGNGLTKELSQCATEKLLIPMEGKIESLNVATSASIVLYEAVRQRR 254 >UniRef50_B6IWB6 RNA methyltransferase, TrmH family n=6 Tax=Proteobacteria RepID=B6IWB6_RHOCS Length = 265 Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 114/264 (43%), Gaps = 7/264 (2%) Query: 84 ADHGGISGKSFID-PEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 + + + F P + + R+ G A A+F P+ + R ++ + Sbjct: 2 SSAPPRAPRPFQSRPTPAKAAPPKPFRICGLPAVAAVFARDPDRVQRLFYEERHRQAVGP 61 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ--AGAQDCVL 200 +A RK Y +V++ EL + +GT HGGV + + R ++ A +L Sbjct: 62 FCARLAEARKPYRLVEKEELDRVAGTPLHGGVVAVAEPRQVLPFNPDWAKRWAAEGRPLL 121 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDA--ALLESGAAIRTAEGGAEHVQPITGDNI 258 L+ NPHNLG ++R+ A FG+ +V+ D S +A R AEGG E+VQ D Sbjct: 122 LLDGIGNPHNLGAIVRTAAFFGLDRLVISDHPEQAQPSESAYRVAEGGFEYVQIYRADRF 181 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTS-LPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + ++ Y VV T+ L + + P ++LG E +GLP I Sbjct: 182 ATAVRRLAES-YRVVGTALGGHPALGRLTGGPKPPAVLLGNEEDGLPAETLRACAELATI 240 Query: 318 DGTGNVAGLNISVATGVLLGEWWR 341 G G V LN++ +L E R Sbjct: 241 PGAGQVQSLNVAATAAILAWEMTR 264 >UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QAT9_9SPIR Length = 237 Score = 213 bits (542), Expect = 9e-54, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 98/237 (41%), Gaps = 8/237 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 + +NA + + ++ R K+ ++ + VD+ E+ K G Sbjct: 1 MFITSKNAITEAI--SKNLVETLYIKFPISKREKDIIKLAEKKKVLIKNVDKNEMEKIVG 58 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVK 224 + + IK+ ++ ++ +A + + L++ ++ HNLG ++R+ FG Sbjct: 59 KVYS--IAADIKENAEIGIENFLQKALEKKDNPLIFILDSITDVHNLGAIIRNAYFFGSS 116 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 G+++ D + + + G A H+ N+ ++ + G+ + S E L Sbjct: 117 GIIIPKDNSAPINEKVYEISAGAAYHLPISIETNLNRTIELMKDKGFWIYYASEEGETSL 176 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 ++LG E+ G+ D + +D + I+ + + LN+S A+ V+ + Sbjct: 177 EDFKFNTPTAIILGNEHSGVRDILKKNSDGSIIINKSNDFDSLNVSAASAVIAYAYS 233 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 17/245 (6%) Query: 97 PEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV 156 R + + GE+ + +S P + R L ++ Sbjct: 19 HTKKERTKTNTFLIEGEHLVEEALKS-PGIVKEILVKDE--TRIPSDLET----GIQCYM 71 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 + E + + TE + + ++ ++ A VL ++ +P NLG M+R Sbjct: 72 LSEDAFSAVTETETPQQIAAVCHMP-----EEKLATARK---VLLIDAVQDPGNLGTMIR 123 Query: 217 SCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 + G+ VV+ D A +G +R+A+G H+ + N+ + +D+ + G V T Sbjct: 124 TADAAGLDAVVLGDGTADAFNGKTLRSAQGSHFHIPVVRR-NLPSYVDELKAEGVKVYGT 182 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + + G P + L++G E G+ A + DL + + G LN++VA +L Sbjct: 183 ALQNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAIL 242 Query: 336 LGEWW 340 + Sbjct: 243 VYHLR 247 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 25/262 (9%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R V G + + E I R + +S + +R + V+ + Sbjct: 23 RDERRIFLVEGPRMVEEI---PKERIERLYISESFERKNPAYIREL---GMPAEVLSDPV 76 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQW-------VSQAGAQ-----------DCVLALE 203 + S T++ G+ ++K+ T ++G + V+ L+ Sbjct: 77 FSYVSDTKNPQGILAVVKRLEYTMEDVLGKSALKCEEKSGEKEKNPENHQIRVPHVIVLD 136 Query: 204 NESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVL 262 N +P NLG + R+ G G+++ D+ + + IR+ G + ++ + Sbjct: 137 NLQDPGNLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRSTMGAVFRMPFFYVKDLPAAV 196 Query: 263 DDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 G + ++G E GL D + D ++I G Sbjct: 197 KSLSSQGIRTYAAHLNGKNVYDEEDYTEGCAFLIGNEGNGLRDEVSECADCLIRIPMCGK 256 Query: 323 VAGLNISVATGVLLGEWWRQNK 344 LN +VA VL+ E RQ + Sbjct: 257 AESLNAAVAAAVLMFEAGRQRR 278 >UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A651_MYCS5 Length = 233 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 98/235 (41%), Gaps = 12/235 (5%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + + G+N+ +S + R + + KE L++ ++ EL+K + Sbjct: 3 KLFIGGKNSTLDAIES-KLNLKRIYLSK------KENLKYFKNTNFKVEILSNLELSKLT 55 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 +H G + + + + VL L++ + +NLG ++RS G+K + Sbjct: 56 NNANHQGFVAELD-FTYSDINKIYE--SKPKIVLVLDHIMDTYNLGAIIRSANAAGIKDI 112 Query: 227 VVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGKPLF 284 V+ + ++ + GG + ++ L+ ++ Y + + + + Sbjct: 113 VMPKENCADITSNVLKVSSGGFIGINFYKVSSLNAFLNKLKKHSYWIYGSMLDKNSTSYY 172 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 M +LG E +G+ +A D ++ I +G+V LN+SVA G+LL + Sbjct: 173 SAKYNFPMAFILGNEEKGISKSALVEVDEKIHIPQSGSVESLNVSVAAGILLFDI 227 >UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhodospirillaceae RepID=Q2RQU5_RHORT Length = 348 Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 105/282 (37%), Gaps = 16/282 (5%) Query: 65 EDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQR------AEETRVYGENACQA 118 P P G + + PE R + ++G +A +A Sbjct: 67 RPLPRPAAGAGSTARPPRPPAPRGEADGASRRPEPAARGKRPGGRGDGGLWLFGRHAVEA 126 Query: 119 LFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG-TEHHGGVCFL 177 Q+ A + D + H G+ Sbjct: 127 ALQNPERK-------ALRLLALAGAAEGLPKGGPTVEPADREAIEAVVPPGAVHQGLALK 179 Query: 178 IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-S 236 + + TV++ G V L+ S+PHN+G ++RS A FG++ VVVQD E + Sbjct: 180 VAPLSQPTVEEIARIPG-PSVVAILDQVSDPHNIGAVLRSAAAFGIRAVVVQDRHSPEET 238 Query: 237 GAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVL 296 G ++A G E V + N+ LD F++ G+ + L + +LP + V+VL Sbjct: 239 GTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETTLAEAALPERCVVVL 298 Query: 297 GQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 G E GL RD DL VK+ V LN+S A V E Sbjct: 299 GSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYE 340 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 97/258 (37%), Gaps = 11/258 (4%) Query: 90 SGKSFIDPEVLRRQRAEETRVY--GENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 S ++ + E+ + + + +++ G + + S + + + + K L + Sbjct: 6 SPENPLIKEIKKIKETQRRKIFFEGVHLVETSLVSDYVFTEKVFVTEKFIEKQKNFLEIL 65 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESN 207 + ++ E S T GV + + + ++ ++ + + Sbjct: 66 QEKKIPVIIISEKVAKTISDTVTPQGVFAIADFK-----IKNINDLSNPTFIVIADRIQD 120 Query: 208 PHNLGGMMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDF- 265 P N+G ++R+ FG + V+V S A+R + G + I V +++F Sbjct: 121 PGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALRASAGSIFFLPVIKVT--VKEIEEFV 178 Query: 266 RQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325 + G +V T + F + +V G E +G+ R KI G Sbjct: 179 SKYGLNLVITDLKATISSFNMDFTKPLAIVFGNESKGVSQDLRAIKHTSCKIPHKGKAES 238 Query: 326 LNISVATGVLLGEWWRQN 343 LN+++A +L E RQ Sbjct: 239 LNVAMAATAILYEILRQR 256 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 50/250 (20%), Positives = 82/250 (32%), Gaps = 6/250 (2%) Query: 97 PEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQS--VTPRFKEALRWMAANRKAY 154 E R G + Q+ E + + PR L A Sbjct: 18 HEKKHRDLENGFLAEGLKVIEEALQAGWE-VRMLLYTSDVLRHPRGVALLDKARATGTEL 76 Query: 155 HVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 ++ L + T+ G LI K + + Q V+ L+ +P NLG + Sbjct: 77 WECEKQVLAVVTDTKTPQGALALIAKPEHSL--DVLLQGRGTPLVVVLDGLQDPGNLGTI 134 Query: 215 MRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ ++GV+ ++ L +R + G H+ VL+ F AG Sbjct: 135 IRTADACELQGVITLEGTVDLFHPKVVRASAGALFHLPAFGDLPAPAVLEFFTGAGVQKF 194 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 L++ L +G E G + D V I G LN+ VA Sbjct: 195 VADPRGDYSLYECDFSRPTALFMGNEARGCGEMLHAAADRVVAIPMPGQAESLNVGVAAS 254 Query: 334 VLLGEWWRQN 343 + + E RQ Sbjct: 255 LFIYEAVRQR 264 >UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2Z7_9CYAN Length = 269 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 89/247 (36%), Gaps = 11/247 (4%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELTKAS 166 VYG + I + + F E ++ +T+ S Sbjct: 14 ITVYGRKPVLEALSNPDIIIDKLLIANNARGEFIDEIIKQARQRGVKVSRESPKYITRIS 73 Query: 167 GTEHH-GGVCFLIKKRNGTTVQQWVSQAGAQDC--------VLALENESNPHNLGGMMRS 217 H GV + + ++ + + LAL+ NP N+G ++R+ Sbjct: 74 RNGRHDQGVVVDVIPPAMEALSTYLERQQSHPPNQKPQTHKFLALDGVKNPSNVGMIIRT 133 Query: 218 CAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 C G G+++ + + I+ + G A + + + + + L RQA YT+ S Sbjct: 134 CLAAGFDGIILPRKGCPDLNPLVIKASAGTAFYTRVLRCAELSDALQQLRQANYTIYGLS 193 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 L+ S V VLG E EG+ + D V I LN++ A V+ Sbjct: 194 GTATSTLYNLSFSPFSVFVLGNETEGINRDHHNLIDTWVSIPIEFPAESLNVASAAAVVC 253 Query: 337 GEWWRQN 343 E RQ+ Sbjct: 254 FELKRQH 260 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 90/243 (37%), Gaps = 8/243 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK--EALRWMAANRKAYHVVDE 159 R + + + G + + + + + + + L + + Sbjct: 25 RNKESKFIIEGYRIVMLALECMAN-LDYVFINEEFENKKEHVKLLEDLDKKNTKIYKTTN 83 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 + TE+ G+ ++ + + VL L+ +P N+G ++R+ Sbjct: 84 KNFKELVDTENTQGIIGVVSFKKKKLSESI---NKKDKFVLILDRIQDPGNMGTIIRTAD 140 Query: 220 HFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 GV ++ ++ + + IR+ G + I +D + + +V++ Sbjct: 141 SAGVDAIIALKGCVDIYNPKVIRSTMGSIFDMNIIDASQ-DETVDMLKSLDFNIVSSYLN 199 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 K +K+ LV+G E G+ + +D+ VKI G LN ++++ +L+ E Sbjct: 200 TENFYDKIDYGSKVALVIGNEANGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYE 259 Query: 339 WWR 341 + Sbjct: 260 IKK 262 >UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B15F Length = 242 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 24/237 (10%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R V G + + + + + + VV ++ Sbjct: 22 RDEKGLFLVDGFHMVEEA---KKAGLCDLVISTDES----------LEGQDKVLVVSDSV 68 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + K S T+ + + K++ + D VL L+ +P NLG ++RS F Sbjct: 69 MEKLSYTKTPQPIMAVCHKKD--------NILKHYDRVLILDGVQDPGNLGTILRSALAF 120 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G K +V+ D L + A+R+ +G H+ + D++ +V+ + ++ G V+ TS Sbjct: 121 GFKQIVMSPDCVDLYNDKALRSTQGAVFHLDIVR-DDLHHVIPELQKLGVRVIATSLHNA 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + KM V+G E G+ D +D + I + LN+ VA G+++ Sbjct: 180 SSIDDIKSTDKMAFVMGNEGNGVRDETIAMSDASLYIPID-TMESLNVGVAAGIVMY 235 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 51/221 (23%), Positives = 83/221 (37%), Gaps = 7/221 (3%) Query: 126 AIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNG 183 IV +F L A+ V L K + E G+ + K + Sbjct: 49 EIVEVFFAPEHFLGQNEFPLLETFASEGVKVCQVAPFLLEKMAYRERPEGLIAIAKMKRH 108 Query: 184 TTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRT 242 T + V G L E P NLG M+RS GV G ++ + + + IR Sbjct: 109 TLAEMPVRPNG---LYLVAEAVEKPGNLGSMLRSADAAGVDGFIICNKCTDIYNPNVIRA 165 Query: 243 AEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEG 302 + G V +N D ++ + + + + + +V+G E G Sbjct: 166 STGALFSVPLAEAEN-QEAYDWLKKNNIRTLAATPHTDQIYTDVDMTQAVAIVVGTEQTG 224 Query: 303 LPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L + + +DL V+I G + LN++ AT +LL E RQ Sbjct: 225 LTELWMEHSDLPVRIPMLGKIDSLNVATATTILLYEAARQR 265 >UniRef50_A6Q6S3 RNA methyltransferase, TrmH family n=2 Tax=Epsilonproteobacteria RepID=A6Q6S3_SULNB Length = 234 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 90/231 (38%), Gaps = 11/231 (4%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQ-SVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG+ C + PE + + + + P+ + ++E S Sbjct: 7 MIIYGKQVCLYALEKHPETVSTVYVAKKGILPQ-----KLFHQFHDKIKFLEEKWAQSMS 61 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 +H G+ I + ++ +D ++ L+ ++ N+G ++RS G V Sbjct: 62 KGGNHQGLLLEISELEQPSLSDV----KREDFLVILDGLTDVGNIGAIVRSAYALGADAV 117 Query: 227 VVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + L A RT+ G + + NI++V ++ Q G+ + + E + Sbjct: 118 IATGVKQLNFEAIARTSSGALLDMPFLLIPNILDVCNELHQVGFKLYGAAMEGDA-VQLM 176 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 K L+LG E +GL A+ D + I+ LN+S A +L+ Sbjct: 177 EFERKRALILGSEGKGLSKKAQGKIDHLISIEMKHAFDSLNVSAAAAILIH 227 >UniRef50_C0EHG6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EHG6_9CLOT Length = 259 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 95/249 (38%), Gaps = 4/249 (1%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK 152 + + +R + + G +S + + ++ ++ L M A Sbjct: 14 AKLSGSKKQRDASGLFCLEGVRLIADAVRS-GVTLEKILITENCLQKYNHELAEMLAING 72 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLG 212 + + K S + GV + KK + T + G C LAL + +P N+G Sbjct: 73 KMNTISGELAGKLSDVKSPQGVFAIAKKLDKTLDTDTIKSGG---CYLALCSTQDPGNIG 129 Query: 213 GMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 M+R+ G+ GV++ + + S +R+ G ++ +++ + G Sbjct: 130 TMIRTADALGIDGVLLHNTCDIYSPKVVRSTMGSLFRMRFALCPDLLGLTASLNACGVDT 189 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 E P+ + S VL +G E GLPD+ R+ I GN LN + A Sbjct: 190 CAAVVEDALPVTRASFSGPRVLYIGNEGNGLPDSIAFACARRITIPMRGNAESLNAASAA 249 Query: 333 GVLLGEWWR 341 +L+ E + Sbjct: 250 AILMWEMTK 258 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 12/266 (4%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQS--RPEAIVRAWFIQSV--TPRFK 141 ++ E R++ + + G + L ++ + +F + Sbjct: 14 QNPKIKQAVKLRERHARKQTDLFLIEGY---RELLRAVDAGRKMETLFFCPELYLGTNEA 70 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ--DCV 199 ++ +A + + E+ K S + G+ I + +++ Q Q + Sbjct: 71 SLIQKIAKTGASLYQCTESVFKKLSYRDRPDGLIA-IAPQFHLSLEDLGKQLKNQNNPFL 129 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNI 258 + E P NLG ++R G+ ++V D + + +R + G V I Sbjct: 130 IVAEAIEKPGNLGTILRCSDAVGLDALIVCDACTDIHNPNVVRASVGTLFTVPVIESQG- 188 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 L +Q G +++ + + L L + + +G E GL + D++V+I Sbjct: 189 AETLQWLKQKGISILAATPHAKQELADIDLTGPLAIAVGTEQLGLSPQWMEQADIQVRIP 248 Query: 319 GTGNVAGLNISVATGVLLGEWWRQNK 344 G LN+++AT +LL E RQ K Sbjct: 249 MYGIADSLNVAMATTILLYEALRQRK 274 >UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax=Leptospira RepID=Q04SA9_LEPBJ Length = 253 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 13/238 (5%) Query: 110 VYGENACQALFQSRPEA-----IVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 ++G+ L ++ + ++ E + + H + ++L Sbjct: 11 IFGKRTLIELTEAHIGKEHSFPFTDLYVKENPGTDIVEKILNRLPSFVKVHRISGSKLDS 70 Query: 165 ASGTEHHGGVCFLIKKRNG-----TTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 +H GV L +++++S+ L L+ +P NLG ++R+ Sbjct: 71 LVPGRNHQGVVALKSPFRQQISDKKNLEEYLSE--KPGTFLVLDRIQDPGNLGNILRTAE 128 Query: 220 HFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 FGV +++ + + + + + G ++ T N+ N L+ ++ GY +V+TS Sbjct: 129 CFGVTNIILPERESAGITPVVEKVSSGALSFLKIFTVKNLANTLELLKENGYWIVSTSDR 188 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + K ++ +++G E EG+ + +D ++I GN++ LN++VATG++L Sbjct: 189 GTENWSKLPELKELAILMGNEGEGVKRILLEKSDFVLRIPIHGNLSSLNVTVATGIVL 246 >UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulobacteraceae RepID=B8H4C5_CAUCN Length = 278 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 61/273 (22%), Positives = 105/273 (38%), Gaps = 10/273 (3%) Query: 73 SRAPGDETPEKADHGGISGKSFIDPEVLRRQRAE-ETRVYGENACQALFQSRPE-AIVRA 130 S + ++ + G R + + + ++G +A +A + A R Sbjct: 3 SHSERNDRKRPSAQGRDFRSKPRKQNDFSRGQGDAKDWIWGTHAVEAALANPRRPAPKRL 62 Query: 131 WFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK-ASGTEHHGGVCFLIKKRNGTTVQQW 189 R L+ + V++ E+ K H G+ I + T+ + Sbjct: 63 LATPDRAKRLAPHLQKLT----CLQVMEGQEIAKQLPQGAVHQGLALKIDEPEPLTIAEL 118 Query: 190 VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAE 248 A+ ++ L+ ++P N+G + RS A FG KGV++QD SG +TA G + Sbjct: 119 --GTPAKGFLVMLDQITDPQNIGAIFRSAAAFGAKGVILQDRHAPALSGVLAKTAVGAVD 176 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 N+ L++ G+ V + E + L VLVLG E EG+ Sbjct: 177 KAPYARVVNLSRALEELADLGWRAVALAGEAEQSLDAVLDSQPTVLVLGSEGEGVRRLVA 236 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 + D KI G LN+S A + L E + Sbjct: 237 EHCDALGKIPMPGGFESLNVSAAAAIALYEASK 269 >UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13 Tax=Rhizobiales RepID=A7IKP0_XANP2 Length = 288 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 9/235 (3%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG + + R ++ R E A +V ++ K G Sbjct: 56 LLYGWHTVAEAIGNPKRRFRRLRATENAIHRLAEEGLTPP---IAPEIVRPGDIDKLLGA 112 Query: 169 -EHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H G+ + ++ D VL L+ ++PHN+G ++RS A F V +V Sbjct: 113 DAVHQGLLAEVDHLPSPRLKDI----AKTDLVLVLDQITDPHNVGAIVRSAAAFAVSAIV 168 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + +G ++A GG EHV N+ L + ++ G VV SE L T Sbjct: 169 TTARHSPAATGVLAKSASGGLEHVPFCLVTNLARALTELKENGMLVVGLDSEGPADLEDT 228 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 + A + LVLG E +GL R+ D+ +ID G + LN+S A + LG R Sbjct: 229 PMRAPLALVLGAEGKGLRQLTRETCDVLARIDLPGAIKSLNVSNAAALSLGMARR 283 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 14/239 (5%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R++A + GE+ + + R + ++ + S R ++ +A VV + Sbjct: 24 RKKAGMYLLEGEHLVEEAIKERAQ--IKLIVVTSN--RLEDYKNLLAQTDVQVLVVSQDV 79 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 K S TE G+ +++ + + + L+ +P NLG ++R+ Sbjct: 80 FHKLSMTETAQGILAVVEIVKQEIL-------PHKGRFIVLDAVQDPGNLGTIVRTADAA 132 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-Q 279 G VV+ L + +R+ +G H+ N+ L ++ G V T+ Sbjct: 133 GFDAVVLGTGTVDLYNDKVLRSMQGSHFHIPVFQA-NLQEYLPILKEKGVQVAVTALHRD 191 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 K + +V+G E +G+ D D D+ V I G LN+S+A+ +L+ + Sbjct: 192 SKDYSVLQGATDVAIVVGNEGQGVSDDVIDLADVVVTIPIFGKAESLNVSIASALLMYK 250 >UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax=Orientia tsutsugamushi RepID=B3CT02_ORITI Length = 266 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 100/234 (42%), Gaps = 8/234 (3%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 ++G +A A + I + +S + ++ + Y +V L + G++ Sbjct: 33 IFGTHASLAALNNPLRVIRYIYCTESCFLSLSKLIQ-----KHDYKIVTTKFLHQLLGSQ 87 Query: 170 -HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 H G+ ++ + A + L+ + +NLG ++RS A F + +++ Sbjct: 88 IVHQGIAVNTIPLTINGIKH-IDLATPNYKIAILDQLLDHNNLGAIIRSAAAFNISTIIL 146 Query: 229 QDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 + +E +G + A G E + + N+ N ++ ++ G+ ++ L + + Sbjct: 147 PENNSIEENGTIAKIAVGALEKINLVKVKNLYNTINYLKKYGFWIIGLDLNNSNQLTEQT 206 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 +KM VLG E +GL + R D +KI + LN++ A ++ E ++ Sbjct: 207 FHSKMAFVLGSENKGLRNLTRQQCDFLIKIPMSHKTESLNVAGAATIIFYESFK 260 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 102/280 (36%), Gaps = 43/280 (15%) Query: 108 TRVYGENACQALFQSRPEAIVRA------------------WFIQSVTPRFKEALRWMAA 149 + G A + +++P A+ + + R K L AA Sbjct: 1 MVISGLRAIEEFLRAQPAALEGLHAGGKNSKTQQSCVRVLTLYYAAENARIKRLLGMAAA 60 Query: 150 NRKAYHVVDEAELTKASGT-----EHHGGVCFLI-------------KKRNGTTVQQWVS 191 A L K + + H G+ ++ KKR Q + Sbjct: 61 RGIRITHTTCAVLDKLARSLPPALRDHRGILAVLSSPSATPQGSHTRKKRPAVDSSQERT 120 Query: 192 QAGA-----QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEG 245 A VL L+ ++PHN+G ++RS F V V++ + R + G Sbjct: 121 LLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETITRVSAG 180 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 V + N+V +++G+ + G+ + + P K LVLG E G+ Sbjct: 181 AVAWVPLVRVRNLVRTAGILKRSGFWLYGADV-AGEAIGARTFPPKTALVLGNEGHGVSP 239 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 R D + I GNV LN+SVA G+LL E R ++ Sbjct: 240 LLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQS 279 >UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D0U2_PELTS Length = 270 Score = 206 bits (525), Expect = 8e-52, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 4/244 (1%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE-ALRWMAANRKAYHVVDEA 160 R++ + + G + S + + + R E L + VDE+ Sbjct: 21 REKEGKFLIEGVRFVEEALNSAWPVEMLVYCRRITETRRGEALLEKASFQGVPLVEVDES 80 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 + +GT G ++KK +++ + G ++ ++ +P NLG ++RS Sbjct: 81 LFGELAGTTTPQGALAVVKKGK-VSLED-LQAGGEPALLVIVDGVQDPGNLGTIVRSAGA 138 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G GV++ + A + + A+R G +V + V + +Q G V Sbjct: 139 AGAGGVILLKGTADIFNAKALRATMGAIFYVPVVQDVTSVEAMTYLKQLGIKAVAGDPRG 198 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K ++ L LVLG E G + RV+I G LN++V++ VLL E Sbjct: 199 DKLIYDCDLTVPCALVLGSEAAGAGEPVLRMVAERVRIPMPGRAESLNVAVSSAVLLFEA 258 Query: 340 WRQN 343 RQ Sbjct: 259 VRQR 262 >UniRef50_B6JLD6 23S rRNA methyltransferase n=13 Tax=Helicobacter RepID=B6JLD6_HELP2 Length = 227 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 99/230 (43%), Gaps = 8/230 (3%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + VYG+ + S E + + + + +F AL+ N VD + + Sbjct: 2 QAVVYGKQVIMHILNSHQEKLQEIYLSKEIDKKFFFALKKACPN---IIKVDNKKAQSLA 58 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 +H GV ++ T++++ +L L ++ N+GG+ RS G+ GV Sbjct: 59 RGGNHQGVLAKVELPLATSLKEIKKAQK----LLVLCGITDVGNIGGIFRSAYCLGMDGV 114 Query: 227 VVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 ++ A L +R++ G + N ++++++ + +G+ + S + + Sbjct: 115 ILDFAKELAYEGIVRSSLGLIYDLPFSVMPNTLDLINELKTSGFLCLGASMQGSSQVENL 174 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 SL K L LG E+EGL D + + + LN+SVA G+L+ Sbjct: 175 SL-KKCALFLGSEHEGLSKKILAKMDAILSVKMRRDFDSLNVSVAAGILM 223 >UniRef50_C0QYW1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYW1_BRAHW Length = 236 Score = 206 bits (525), Expect = 9e-52, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 98/237 (41%), Gaps = 8/237 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 + +N + + + V+ R K+ ++ + VD+ E+ K G Sbjct: 1 MFITSKNTIVEAI--SKDLVQTLYIKFPVSKREKDIIKLAEKKKVPIKNVDKNEMEKIVG 58 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 + + IK+ + ++ +A + L++ ++ HNLG ++R+ F V Sbjct: 59 KIYS--IAADIKENVEIGIDSFIEKAFEKRENPLIFILDSITDVHNLGAIIRNAYFFDVA 116 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 G+++ D + + +EG A H+ N+ V+D + G+ + S + L Sbjct: 117 GIIMPKDNSAPINEKVYEISEGAAYHLPISIETNLNRVIDLMKDKGFWIYYASEKGETSL 176 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + ++LG E+ G+ D + +D + I+ + LN+S A+ ++ + Sbjct: 177 EDFKFNSPTAIILGNEHSGVRDILKKNSDGSIIINAVNDFDSLNVSAASAIIGYAYS 233 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 103/241 (42%), Gaps = 22/241 (9%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R + + V GE+ ++ A+ + T F+ + V E+ Sbjct: 23 RDQTGKFLVEGEHLIGEALKAG--AVEQLLIEAGRTNPFEREKEAI--------VCGESV 72 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + K S + + ++ A A + L+ +P N+G ++R+ F Sbjct: 73 MRKLSANVSGAWLIAVCTQKTT---------APAGLRTVVLDGVQDPGNVGTIIRTAVAF 123 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G V++ D A + + +R+ +G H+ ++ L++ ++ G TV+ T+ + Sbjct: 124 GFDQVLLSPDCADVYNEKCVRSTQGALFHIAISR-TELIPALNELKELGVTVIGTALQGA 182 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 +PL + + + +VLG E +G+ A D D R I+ + + LN++VA G+ L + Sbjct: 183 QPLSELPVSENIAVVLGNEGQGIRPATLDICDQRALIEMS-SFESLNVAVAAGICLYRYR 241 Query: 341 R 341 R Sbjct: 242 R 242 >UniRef50_A3VTQ4 RRNA methylase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTQ4_9PROT Length = 243 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 12/245 (4%) Query: 101 RRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHV--VD 158 R E +YG + +A + V+ ++ L W+ + + V Sbjct: 5 RAPPIEPLWLYGRHTVEAALGNPQRHQVKLLATRNA-------LGWLKERGRTITIDPVT 57 Query: 159 EAELTK-ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRS 217 ++ K H G+ L ++ + + + G +L L+ ++P N+G + R Sbjct: 58 PKDIDKALPPGAVHQGLAMLANPLPSPSLAEIL-ENGETGPLLVLDQITDPQNIGALFRL 116 Query: 218 CAHFGVKGVVVQDAALLESG-AAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 A F K V+ QD G + A G E V I NI L+ R+ + + Sbjct: 117 AAAFSAKAVIAQDRRTPPLGGPLAKAATGAVECVPFIPVVNISRALEAIREKHIPIFGLA 176 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 E L T+ LVLG E +GL R D V I + LN++ A + L Sbjct: 177 GEGALSLRDTAPTRTCALVLGAEGKGLRPGVRAVCDQLVAIPIDPQIESLNVATAAAISL 236 Query: 337 GEWWR 341 R Sbjct: 237 YHLGR 241 >UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5X9_9DELT Length = 325 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 75/324 (23%), Positives = 123/324 (37%), Gaps = 23/324 (7%) Query: 35 GGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSF 94 RP +SRA G ++P K + + P++ G+S Sbjct: 3 RSKRPDRSRAKRGPAKGAKPGPAKPGPAKPGVAKPGAAKSGGAGDRPKREKGAKRGGRSR 62 Query: 95 IDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAAN---- 150 + R V GE A L ++ P + R + R E+L +AA Sbjct: 63 ERERRVARLDPRHHPVPGERAVVELLRASPTRVRRLLLEEG---RRFESLEALAAEALGE 119 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA------------GAQDC 198 R V+ G GV + + + + Sbjct: 120 RVTIERVEREIFDDLIGPGLARGVLAVTRPPRRWDFEALLEGGPEAEGGEAVRTRRGHRI 179 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 ++ L+ +PHNLG ++R+ FG VV QD A S A+R++ G E + N Sbjct: 180 IVLLDGVQDPHNLGAVIRNAEFFGATAVVWGQDRAAPLSAVAVRSSAGATERLPLGQVTN 239 Query: 258 IVNVLDDFRQAG-YTVVTTSSEQGKPLFKT--SLPAKMVLVLGQEYEGLPDAARDPNDLR 314 + L+ + +G + VV T ++G P+ + P+ M+LVLG E G+ R+ D Sbjct: 240 VARALEQAKASGTWWVVGTVVDEGTPVHEFAQDPPSDMILVLGSEERGMRRLTRERCDFL 299 Query: 315 VKIDGTGNVAGLNISVATGVLLGE 338 V I G++ LN+S A V L + Sbjct: 300 VTIARGGSLGSLNVSAAGAVALAK 323 >UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1I377_VITVI Length = 569 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 49/348 (14%) Query: 16 YVRSDDDSDKRTH---NPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTV 72 Y+ D+ +++ +PR K R D R R + + + W W+ Sbjct: 229 YMERDESAEEEMEVIDDPRWDKIKNR-YTETGDVKGRYERPELRRWNKQENWGRKTWKEA 287 Query: 73 SRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWF 132 + + I G+ +YG A + + Sbjct: 288 TESTI---------PKIVGEG----------------IYGVGPVLAALSAGRREFYALYV 322 Query: 133 IQSVTPR-----------FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKR 181 + + F++ L+ + + + +L H G+ Sbjct: 323 QEGLDLSGNNRKKKDKKGFEKVLKLAEKIGLSIKDLSKHDLNMVVDNRPHQGLVLDASPL 382 Query: 182 NGTTVQQW---VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESG 237 +++ +++ +AL+ ++P NLG ++RS FGV GVV+ + SG Sbjct: 383 EMVKIKELDPVLTEGEKGPLWVALDEVTDPQNLGAIIRSAYFFGVSGVVLCAKNSAPLSG 442 Query: 238 AAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS-SEQGKPLFKTSLPAKMVLVL 296 + + G E ++ N++ L + G+ V+ S S + PL + S A +LVL Sbjct: 443 VVSKASAGSLELMELRFCKNMMQFLTSSAENGWQVLGGSVSPRAIPLNEISPGAPTILVL 502 Query: 297 GQEYEGLPDAARDPNDLRVKIDG----TGNVAGLNISVATGVLLGEWW 340 G E GL ++I G V LN+SVA GVLL Sbjct: 503 GSEGTGLRPLVERSCTQLIRIPGNIPSFLAVESLNVSVAAGVLLHHLV 550 >UniRef50_A0RMQ8 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Campylobacterales RepID=A0RMQ8_CAMFF Length = 226 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 9/228 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG+ L + E ++ + + + K+ + + H VD + + Sbjct: 1 MIIYGKQLFLHLLEKHKEKLINIYLAKDIE---KDIFNKIVKSGVKIHKVDNKKAQALAR 57 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 +H G + + ++ + QD ++ L S+ N+G ++R+ G GV+ Sbjct: 58 GGNHQGFLAEVCEFEFASLNEI----KKQDFLVVLYGLSDVGNIGSIVRTTYALGGGGVI 113 Query: 228 VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTS 287 + + G IR + A + + +++L++ +Q G+ + + ++ P + Sbjct: 114 MISKSASMEG-IIRASSAAAYELPITLVSDGLSLLNELKQLGFKIYGSDAKGKNP-SECK 171 Query: 288 LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 K VLV+G E EG+P A + D + I+ LN+SVA G+L Sbjct: 172 FGKKTVLVMGSEGEGIPRKALEKCDENLGINMREGWDSLNVSVAFGIL 219 >UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39 Tax=Alphaproteobacteria RepID=A9M5R9_BRUC2 Length = 286 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 12/289 (4%) Query: 56 QSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAE-ETRVYGEN 114 Q R +DS + + R +KA G S + P + AE R+YG + Sbjct: 2 TDQNSPRTPKDSHYARLRR---QHRDQKAGAEGKSPRKPQRPAIAASAVAEGTVRLYGLH 58 Query: 115 ACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE-HHGG 173 +A ++ I+R ++ R + + + +VD ++ K +G+E H G Sbjct: 59 TVRAAVENPQRKILRMRATRNGFARLE--IGEADSLPFPVEIVDPRDIDKETGSEAVHQG 116 Query: 174 VCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAAL 233 V + + + +L L+ ++PHN+G +MRS FG ++ Sbjct: 117 VMIEAEPLRTRKLSEL----RESPLLLVLDQVTDPHNVGAIMRSAVAFGAGALITTSRHS 172 Query: 234 L-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKM 292 E+G + A G E + I N+ +++ G+ + S+ + T ++ Sbjct: 173 PQETGVLAKAASGALELIAHIEVRNLAEAIEELHTLGFQTIGLDSQGPLEMEATLSGNRI 232 Query: 293 VLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 LVLG E +GL R+ ++D G + LN+S A + L R Sbjct: 233 ALVLGAEGKGLRQKTRETVTALARLDMPGEIKSLNVSNAAAISLYAAER 281 >UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepID=C0WU39_LACBU Length = 255 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 12/242 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R + + + G + + + I + F + L A Y + E Sbjct: 24 RLSSGQYIIEGWHIVDEAIKHD-QQIDAVIVTDAN---FLDQLEVDPAVTDTYLITPE-V 78 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 S TE GV ++ N + + G L L+N +P N+G M+R+ Sbjct: 79 AKHISATETPQGVFAVLTTENYH--ESIPEKLGGS--WLMLDNIQDPGNIGTMVRTADAA 134 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQ 279 G+ GV+ + A + + +R+ +G HV+ ++ + F + V T +Q Sbjct: 135 GMNGVIFGKGTADIYNPKVVRSMQGSQFHVRLY-SGDLAVWMAAFNKHNVPVYGTELNDQ 193 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + LV+G E G+ D D + I G LN++VATG+L+ + Sbjct: 194 AISYDDVEPTKQFALVMGNEGNGVSADLLDKTDQNLYIPMNGEAESLNVAVATGILIFHF 253 Query: 340 WR 341 + Sbjct: 254 VK 255 >UniRef50_C8PM13 RNA methyltransferase, TrmH family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM13_9SPIO Length = 271 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 15/249 (6%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV-DEAELTK 164 +E V G A +AL PE I R +F S F +++A ++ Y +V +AEL K Sbjct: 19 KELAVCGFEAVKALAAEHPEKISRLFFAGSRARTFGALCKYLAQRKRLYRLVQSDAELEK 78 Query: 165 ASGTEHHGGVCFLIKKR--NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 G+ HH GV +I++ T ++ + VL + N +NLG ++RS A FG Sbjct: 79 LCGSVHHQGVVAMIEEPCIAAVTPERIKQWEAGKAAVLLCDRIGNANNLGAVIRSAAFFG 138 Query: 223 VKGVVVQ--DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV-VTTSSEQ 279 ++ +V+ DA + +A R A+GG E + T + + L +GY + + Sbjct: 139 IEHIVISGEDAQAQLTPSAYRIAQGGMEFITLYTAPSAEHFLKAC--SGYLMRLGADHRA 196 Query: 280 GKPLFKTSL----PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + L +V+VLG E G+ A+ D+ VKI G+G + LN++ A + Sbjct: 197 YRSLKDIPSLVRADEAVVVVLGNEEHGISAEAKKLCDVLVKISGSGAIESLNVAQAGTLF 256 Query: 336 ---LGEWWR 341 L E R Sbjct: 257 CSALAELRR 265 >UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYS7_HYPNA Length = 269 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 56/266 (21%), Positives = 99/266 (37%), Gaps = 12/266 (4%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 + P D G+ R + ++G +A A + ++ Sbjct: 7 KRPPNTDVATRPGRPENQRFSRRDEEGGPVWLWGTHAVMAALANPARKFHTLLATENAAQ 66 Query: 139 RFKEALRWMAANRKAYHVVDEAELT-KASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + + A + + E+ + H G+ ++ ++ + Sbjct: 67 K-------LPAGVISPQLATAKEIDNRLPPGAVHQGIALRADPLEEAILEDVIAAGATR- 118 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGD 256 + L+ S+PHNLG + RS A FG +G+V+Q A +G ++A G E V I Sbjct: 119 -IAVLDQVSDPHNLGAIFRSAAAFGFEGLVLQTRNAPPITGIVAKSAAGAIETVTEIRAV 177 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFK-TSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 NI L+ +A + V + E + L + AK+ +VLG E GL A Sbjct: 178 NIARALEQLAEADFHTVGLAGESTRSLDEAVKGAAKVAIVLGAEGSGLRPAVAKACSELA 237 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWR 341 +I + LN+S A + E R Sbjct: 238 RIPIAAQMESLNVSNAAAIAFYEASR 263 >UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH5_9CLOT Length = 270 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 98/242 (40%), Gaps = 6/242 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R++ E G C+ S I+R ++ + R+ + + + + ++ + Sbjct: 26 RRQEEAFLAEGVRLCRDAAYS-GVRILRMFYTEEALERYPKDVELLREKAERAFLLSQQL 84 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 S T G+ + + T + +G +L LE+ +P NLG ++R+ Sbjct: 85 AGGLSATVTPQGIFCVCAMLDKTDCLDKMDASGQ---LLGLEDIQDPSNLGTVLRTAEAL 141 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-Q 279 G+ GV++ + + S +R + G + + + ++ Q G+ + + + Sbjct: 142 GIGGVILTRGCCDIYSPKVLRGSMGAVFRLPMALVETMPPAVNALEQKGFVTMAAVPDRE 201 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +P+ + + ++++G E GL RV I G LN SVA +L+ E Sbjct: 202 AEPITQVLFSSPSIVLVGNEGNGLKPETIRACQRRVTIPMLGRAESLNASVAASLLMWEM 261 Query: 340 WR 341 R Sbjct: 262 MR 263 >UniRef50_Q5WEJ4 23S rRNA methyltransferase n=2 Tax=Bacilli RepID=Q5WEJ4_BACSK Length = 246 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 19/237 (8%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R + + GE+ + ++S + F V EA Sbjct: 24 RDQTGRFLIEGEHLVEEAWKSD-WKVETVLTTADDASLFPGECIG----------VSEAV 72 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + + S T+ G+ + +K+ QW + + + L+ +P N+G ++R+ Sbjct: 73 MKELSETKSPQGIVAVCQKK------QWHTPERLKGRFVLLDRVQDPGNVGTIIRTALAA 126 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GVV+ A L + IR +G H+ ++V ++ +++G V TS + Sbjct: 127 DAAGVVLGSGCADLFNAKVIRATQGALFHLPVY-MGDLVTWIEALKESGIPVYGTSLQDA 185 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 P + + L+LG E EG+ D + I LN+SVA G+LL Sbjct: 186 TPHDQFHSQEQFALLLGNEGEGVQSHLLDAATENLFIRQNRKAESLNVSVAAGILLF 242 >UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Proteobacteria RepID=A6Q869_SULNB Length = 263 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 5/232 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG NA + I + +S P ++ + + D+A L++ S Sbjct: 32 IYGRNAVLEALEDPDITIHKLHLSKSNKDAPVLEQMKKIASKRGIEVQYHDKASLSRISK 91 Query: 168 TEHH-GGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 GV I + + ++S+ ++AL+ +NP NLG ++RSCA + + Sbjct: 92 NAKQDQGVALDIVLEHFGDEKDFISKNINYR-IIALDGVTNPQNLGMIIRSCAAGNIDAI 150 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ A S I+ + G + I N+ L FR+ G ++ T SS K + Sbjct: 151 LLPTKGAAQISPLVIKASVGTLFKMSIIKTSNLKETLKHFRKEGASLYTLSSHADKSYKE 210 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 K + VLG E EG+ A + + I V LN++V +L Sbjct: 211 QIYSEKTIFVLGNESEGVSPAVEKLCNASIAIPMQRGVESLNVAVTASLLAF 262 >UniRef50_C1SL80 rRNA methylase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SL80_9BACT Length = 225 Score = 203 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 92/234 (39%), Gaps = 11/234 (4%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++G N + + IV+ F++ + + ++ R E G Sbjct: 1 MIIHGRNTVEEALKL---GIVKLLFVKVNST--FDTSKYDVETRTY----GPKEFEHYYG 51 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 E G+ I+ + + + V+ L+ +P N G ++R+ FG+K ++ Sbjct: 52 KEA-QGIAAEIRDMLPKKFDKAFDEIVEKGSVVLLDRIFDPMNYGAIIRAANCFGIKTIL 110 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 V D + A + + G + + N L ++ GYT L Sbjct: 111 VGLDRQAPITSAVCKASSGTIFYTDIVGAVNTATALKKLQENGYTAYAADVNGKVELKDV 170 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K ++++G E +G+ A D D+ +KI G++ LN+S + V+L E+ Sbjct: 171 EFAEKSIIIMGSEGKGIRPALLDTADVHIKIPMNGDIDSLNVSQSAAVILYEYA 224 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 94/238 (39%), Gaps = 11/238 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R+ + + G + + ++ + + F Q + L + + V + Sbjct: 24 REELNQYIIEGFHLVEEAVKANAD-VQWILFNQRGQQEWGTWLAEQETEKLIF--VSDEV 80 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 L S G+ ++ +Q +S G L L+N +P N+G M+R+ Sbjct: 81 LNSLSELPTSQGILAIVTLETQQ--EQSLSFKGGW---LLLDNIQDPGNVGTMIRTADAA 135 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQ 279 G+ GV++ + A + + +R+ +G H+ + + + V+ F++ G V T E Sbjct: 136 GLAGVILGKGTADIYNTKVLRSMQGSHYHLPVLQRE-LTEVVQAFKKQGLPVFGTELNEA 194 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 ++ L+LG E G+ + I G LN+++A GVL+ Sbjct: 195 AIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMKGQAESLNVAIAAGVLMF 252 >UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veillonella RepID=D1BMG9_VEIPT Length = 264 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 5/261 (1%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 ++ + + RQ+ E V G + + + + ++ + Sbjct: 5 QSKDNKTIKRIISLRQRKNRQKNGEYIVEGIRSIRDIAAMGAVKTIVIRESKAQDKNILD 64 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 L ++ + K T + GV ++ K S + + L Sbjct: 65 LLDLDTVQSVPKYIAQDPVFDKVDNTVNGQGVVAIVSKPTY----DIESISIVDGLYITL 120 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + +P NLG ++R+ GVKG+ + + + +R+ + + + Sbjct: 121 DGVQDPGNLGTIIRTAVAAGVKGIFLMKGTVDPFNDKTVRSTMSALHKIPLYEDITLTLL 180 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 D ++ T T+ E P + +LVLG E G+ + R+ I G Sbjct: 181 HDMVTESNMTSYVTALEHSNPYHTVRYAKRTMLVLGNEGNGVTPEVMNLCTNRIMIPMYG 240 Query: 322 NVAGLNISVATGVLLGEWWRQ 342 ++ LN+SVA + + + Q Sbjct: 241 DMESLNVSVAAALCMYKVQEQ 261 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 18/233 (7%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 + G + + Q + + ++ + R + + +V L + + + Sbjct: 28 LIEGWHLFEEA-QQSGQGFRHIFVLEELAERVADQEK--------VVLVSADVLKELTDS 78 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 G+ + + Q L LE+ +P NLG ++R+ G GV + Sbjct: 79 PSPQGIIAEVDMPQLAFPTDY------QGKYLILEDVQDPGNLGTIIRTADAAGFDGVFL 132 Query: 229 QDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-GKPLFKT 286 + A + + +R+ +G H+ +I + + ++ V+ T+ + Sbjct: 133 SEKSADVYNSKTLRSMQGSHFHLPIWR-TDIYKICREMQEHNTPVLATTLSKVSVDYKTV 191 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 LV+G E +G+ D V I G LN++VA G+L+ + Sbjct: 192 PHQESFALVMGNEGQGISAEMTTLADQLVHITMPGQAESLNVAVAAGILIFSF 244 >UniRef50_UPI00006CAEFD RNA methyltransferase, TrmH family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CAEFD Length = 293 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 58/246 (23%), Positives = 94/246 (38%), Gaps = 23/246 (9%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVT----PRFKEALRWMAANRKAYHVVDEAELTKA 165 VYG N S IV Q V P+ + A + VD +L + Sbjct: 38 VYGLNPTMIALHSNKRNIVEVIINQHVQSHLPPKISNIINTANAKKIPVKFVDREKLDRL 97 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 + H V + + S + +L L+ ++P N G ++R+C + GV Sbjct: 98 VQNQPHQNVVIKAEPLKYLRTKS--SDILQGNMILFLDRITDPQNFGAIIRTCQYLGVDN 155 Query: 226 VVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT---SSEQGK 281 VVV + + + +T+ G E + + V L D + G+ V +T SE Sbjct: 156 VVVDEFSRCPLNPTVSKTSSGALEVMDIYCTPDPVEFLKDCQLRGWKVYSTGLNHSENQI 215 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI--------DG---TGNVAGLNISV 330 L K L K+VLV+G E G+ +D V I + LN++ Sbjct: 216 SLEK--LKDKIVLVMGNEGNGVDPKILKVSDKIVSIDQTLYLNRPMVFPYTLIDSLNVNS 273 Query: 331 ATGVLL 336 AT +L+ Sbjct: 274 ATSILI 279 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 5/189 (2%) Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMM 215 + + K + + G+ +IK+ N T+ Q +L +E P NLG ++ Sbjct: 82 ELSKHAFEKVAYRDRPEGLLAVIKQWNH-TLDDL--QLSDPPFLLIVEAIEKPGNLGTIL 138 Query: 216 RSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 RS GV V+ D+ L + A+R++ G + +T + V+ RQ G + Sbjct: 139 RSADAAGVDAVICCDSVTDLFNPNAVRSSTGVLFSMPTVTASS-DEVIKWIRQKGIRTIA 197 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 T+ T L + +V+G E GL + D +V I G LN+++AT + Sbjct: 198 TTPHTDILYTDTDLRGPLAIVMGSEQFGLSEKWLSACDTKVLIPMAGQADSLNVAMATLI 257 Query: 335 LLGEWWRQN 343 L E RQ Sbjct: 258 TLFEAVRQR 266 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 99/247 (40%), Gaps = 11/247 (4%) Query: 101 RRQRAEETRVYGENACQALFQ--SRPEAIVRAWFIQSVTPRFKEALRW-MAANRKAYHVV 157 R++ V G + L I + + + + EA + + + V Sbjct: 27 ERRKQGLFVVEG---VRELIHCAHAGYEIENLFCCRDILDKNPEAWKLDSLIGQTTIYEV 83 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRS 217 +A K + G+ +K +N T + ++ ++ LE+ P NLG ++RS Sbjct: 84 TQAVYEKMAYRGSTEGMMAEVKVKNRTLADLDLPES---PLIVVLESVEKPGNLGAVLRS 140 Query: 218 CAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 V+V + L + IR++ G V + + ++ ++ ++T Sbjct: 141 ADASKADAVIVCNPLTDLFNPNLIRSSIGAIFTVPTVACSS-QACMNFLKERNIKILTAQ 199 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + P + + + +V+G E GL DA R D ++I G + LN+SV+ +L+ Sbjct: 200 LQDSAPYYDSDMRGGTAIVMGTESTGLTDAWRKAADAHIRIPMLGQLDSLNVSVSAAILM 259 Query: 337 GEWWRQN 343 E RQ Sbjct: 260 FEAVRQR 266 >UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03G93_PEDPA Length = 255 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 48/238 (20%), Positives = 95/238 (39%), Gaps = 12/238 (5%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R++ ++ + G + + + A + I E + ++ +V + Sbjct: 24 RKKFKKFLLEGRHPVETALEQ---ATEYEFLIVQEDFDLGELAEQVDNDKLI--LVTKEV 78 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 S T H G+ + + W L L+N +P N+G M+R+ Sbjct: 79 ANHISDTVHDQGIFLI----GYINEEDWQFPDDLSGKWLVLDNVQDPGNIGTMVRTADAA 134 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT-SSEQ 279 G GVV D A + +R +G H+Q + N+ + + + G + + E Sbjct: 135 GFTGVVFGDGTADFYNPKILRAMQGSQYHLQ-LKRLNLEKWIRNCKDQGSVIFGSILDEN 193 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + K +P + L++G E G+ + + D+ + I G+ LN++VA GVL+ Sbjct: 194 ARDYRKIDVPDQFSLIMGNEGNGMSERLIEMTDMNLYIPIKGSAESLNVAVAAGVLMF 251 >UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWK7_9RHOB Length = 271 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 55/274 (20%), Positives = 109/274 (39%), Gaps = 15/274 (5%) Query: 65 EDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRP 124 + P R + PG +K + + PE +YG + +A F ++ Sbjct: 4 DKKPSRPAGK-PGFRGNKKFGGKPAPRRPGLPPEGP-------VLLYGLHTVEAAFANKD 55 Query: 125 EAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT 184 ++ + + R +E R + + ++ A + H G+ Sbjct: 56 RKRLKLFATDNALRRLEE--RGVKIDVPVESMMPRALDRMVTKDAVHQGMILEADPLPAY 113 Query: 185 TVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTA 243 + VLAL+ ++PHN+G ++RS VV + E G+ + ++A Sbjct: 114 GAEHL----KGARLVLALDQVTDPHNVGAILRSAVALDADAVVTTERHAPEEGSVLAKSA 169 Query: 244 EGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGL 303 G + ++ + N+ + + + G++ + S+ L +T K VLVLG E +G+ Sbjct: 170 SGALDMIKHVRVKNMARFIAEMKDEGFSCIALDSDGPASLEETPFSDKTVLVLGSEGKGV 229 Query: 304 PDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 R+ L ++D G + LN+S A + L Sbjct: 230 RQGVREACGLTARLDMPGEIRSLNVSNAAVLSLY 263 >UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selenomonas RepID=C4V3B4_9FIRM Length = 276 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 101/256 (39%), Gaps = 6/256 (2%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP--RFKEALRWMAAN 150 + + R + V G + QS AI+ A + R + L ++A Sbjct: 19 AMLIRSPRRAVKENVFFVEGLRLAEMAVQSN-WAILHAVVTEHAMKMERMQLLLTKLSAR 77 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHN 210 V E + S T+ G+ L+++ T +++ V LAL+ +P N Sbjct: 78 NIPIASVSERLFSACSETDSPQGIILLLQRLPCTPLEEMVQVTEGLPLYLALDRVQDPGN 137 Query: 211 LGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAG 269 +G ++R+ G GV+ ++ A + +R A G ++ +TG + +++ ++ Sbjct: 138 VGTILRTADAAGASGVILLRGCADVYGSKVVRAAMGSLFYLPFVTGVDEEDLVRFAKENV 197 Query: 270 YTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 + + G F L ++VLG E G+ + + + G LN+ Sbjct: 198 LCFYAAACDTDGVTHFAAELSRPSLVVLGNEANGVSERLLR-AGQHLYVPMCGRAESLNV 256 Query: 329 SVATGVLLGEWWRQNK 344 + A +L E RQ K Sbjct: 257 AAAATAILYEAIRQRK 272 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AGJ6 Uncharacterized tRNA/rRNA methyltransferase yfiF... 352 1e-95 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 306 6e-82 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 297 5e-79 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 296 9e-79 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 295 2e-78 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 294 3e-78 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 293 8e-78 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 292 2e-77 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 291 2e-77 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 291 2e-77 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 291 3e-77 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 289 1e-76 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 287 4e-76 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 287 4e-76 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 287 4e-76 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 286 7e-76 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 286 1e-75 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 285 1e-75 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 285 1e-75 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 285 1e-75 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 285 1e-75 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 283 7e-75 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 283 8e-75 UniRef50_C6CLV0 tRNA/rRNA methyltransferase (SpoU) n=25 Tax=Ente... 282 1e-74 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 282 1e-74 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 282 1e-74 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 282 1e-74 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 282 2e-74 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 281 2e-74 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 281 2e-74 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 281 3e-74 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 281 3e-74 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 281 3e-74 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 280 5e-74 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 280 5e-74 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 280 6e-74 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 280 6e-74 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 280 6e-74 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 280 7e-74 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 280 7e-74 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 279 9e-74 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 279 1e-73 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 279 1e-73 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 278 2e-73 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 278 2e-73 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 278 3e-73 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 277 3e-73 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 277 3e-73 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 277 4e-73 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 277 5e-73 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 276 8e-73 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 276 8e-73 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 276 9e-73 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 276 1e-72 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 275 1e-72 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 275 1e-72 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 275 1e-72 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 275 2e-72 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 274 4e-72 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 274 4e-72 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 273 5e-72 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 273 6e-72 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 273 9e-72 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 272 1e-71 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 272 1e-71 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 272 2e-71 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 272 2e-71 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 272 2e-71 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 271 2e-71 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 271 2e-71 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 271 3e-71 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 270 5e-71 UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desul... 270 6e-71 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 270 7e-71 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 270 7e-71 UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 269 8e-71 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 269 9e-71 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 269 1e-70 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 269 1e-70 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 269 1e-70 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 268 1e-70 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 268 1e-70 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 268 3e-70 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 268 3e-70 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 267 3e-70 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 267 4e-70 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 267 4e-70 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 267 5e-70 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 266 7e-70 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 266 8e-70 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 266 1e-69 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 265 1e-69 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 264 3e-69 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 264 3e-69 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 264 3e-69 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 264 4e-69 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 264 4e-69 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 263 5e-69 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 263 7e-69 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 263 7e-69 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 263 7e-69 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 263 9e-69 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 262 1e-68 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 262 1e-68 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 262 1e-68 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 262 2e-68 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 261 2e-68 UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomona... 261 2e-68 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 261 3e-68 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 261 4e-68 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 260 4e-68 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 260 5e-68 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 260 6e-68 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 260 7e-68 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 260 7e-68 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 260 7e-68 UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, grou... 259 1e-67 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 259 1e-67 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 259 1e-67 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 259 1e-67 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 258 2e-67 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 258 2e-67 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 258 2e-67 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 258 2e-67 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 257 4e-67 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 257 4e-67 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 257 5e-67 UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepI... 256 6e-67 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 256 6e-67 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 256 7e-67 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 256 8e-67 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 256 8e-67 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 256 1e-66 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 256 1e-66 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 256 1e-66 UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 255 2e-66 UniRef50_Q5WEJ4 23S rRNA methyltransferase n=2 Tax=Bacilli RepID... 255 2e-66 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 255 2e-66 UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=She... 253 5e-66 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 253 6e-66 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 253 7e-66 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 253 9e-66 UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veill... 252 1e-65 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 252 1e-65 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 252 2e-65 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 252 2e-65 UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D... 251 2e-65 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 251 2e-65 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 251 2e-65 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 251 2e-65 UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostri... 251 3e-65 UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax... 251 3e-65 UniRef50_C0EHG6 Putative uncharacterized protein n=2 Tax=Clostri... 251 3e-65 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 251 3e-65 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 250 4e-65 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 250 6e-65 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 250 8e-65 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 249 9e-65 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 249 1e-64 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 249 1e-64 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 248 1e-64 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 248 2e-64 UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selen... 248 2e-64 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 248 2e-64 UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacill... 248 2e-64 UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Acti... 248 2e-64 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 248 3e-64 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 248 3e-64 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 248 3e-64 UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casse... 247 3e-64 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 247 4e-64 UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococc... 247 4e-64 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 246 6e-64 UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsu... 246 7e-64 UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, s... 246 8e-64 UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5G... 246 8e-64 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 246 9e-64 UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_... 246 1e-63 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 246 1e-63 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 246 1e-63 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 245 1e-63 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 245 2e-63 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 245 2e-63 UniRef50_A9B181 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Chlor... 244 3e-63 UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococ... 244 3e-63 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 244 3e-63 UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacte... 244 4e-63 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 243 5e-63 UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdema... 243 5e-63 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 243 6e-63 UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verru... 243 6e-63 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 243 8e-63 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 243 9e-63 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 242 1e-62 UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 ... 242 1e-62 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 242 1e-62 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 242 2e-62 UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 241 2e-62 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 241 2e-62 UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 ... 241 3e-62 UniRef50_C6VPS4 rRNA methylase n=8 Tax=Lactobacillales RepID=C6V... 241 3e-62 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 241 3e-62 UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (c... 240 4e-62 UniRef50_Q7NN60 Gll0554 protein n=1 Tax=Gloeobacter violaceus Re... 240 5e-62 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 240 5e-62 UniRef50_Q04FE0 rRNA methylase n=2 Tax=Oenococcus oeni RepID=Q04... 240 6e-62 UniRef50_C5NX63 Putative tRNA/rRNA methyltransferase n=1 Tax=Gem... 240 8e-62 UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16... 239 1e-61 UniRef50_C6XSD9 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Sphin... 239 1e-61 UniRef50_C9RRQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 239 1e-61 UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1... 239 1e-61 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 238 2e-61 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 238 2e-61 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 238 2e-61 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 237 4e-61 UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 237 5e-61 UniRef50_B5YER6 23S rRNA methyltransferase n=1 Tax=Dictyoglomus ... 237 6e-61 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 236 7e-61 UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacte... 236 8e-61 UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonad... 236 8e-61 UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Aceto... 236 8e-61 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 236 9e-61 UniRef50_Q038C4 rRNA methylase n=8 Tax=Lactobacillus RepID=Q038C... 236 1e-60 UniRef50_C9LL58 RNA methyltransferase, TrmH family n=1 Tax=Diali... 235 1e-60 UniRef50_Q3ABT2 RNA methyltransferase, TrmH family protein n=1 T... 235 1e-60 UniRef50_C6NZV4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sider... 235 2e-60 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 235 2e-60 UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 ... 235 2e-60 UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia ... 235 2e-60 UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synec... 235 2e-60 UniRef50_C7HA00 tRNA/rRNA methyltransferase n=3 Tax=Ruminococcac... 235 2e-60 UniRef50_C0VZD1 RNA methyltransferase n=1 Tax=Actinomyces coleoc... 235 2e-60 UniRef50_B7C827 Putative uncharacterized protein n=1 Tax=Eubacte... 235 2e-60 UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus A... 235 2e-60 UniRef50_B9DPU7 SpoU rRNA Methylase family protein n=62 Tax=Stap... 234 3e-60 UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Ba... 234 4e-60 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 234 5e-60 UniRef50_A4G4T6 tRNA/rRNA methyltransferase SpoU-like n=3 Tax=Ox... 233 7e-60 UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Ta... 233 9e-60 UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8... 232 1e-59 UniRef50_Q8Z0C3 rRNA methylase n=30 Tax=Cyanobacteria RepID=Q8Z0... 232 1e-59 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 232 1e-59 UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular or... 232 2e-59 UniRef50_D2NNP6 rRNA methylase n=2 Tax=Rothia mucilaginosa RepID... 231 2e-59 UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 T... 231 3e-59 UniRef50_A5US41 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 231 3e-59 UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium ce... 231 3e-59 UniRef50_B6BUD4 tRNA/rRNA methyltransferase n=1 Tax=beta proteob... 231 3e-59 UniRef50_C7M4Y5 tRNA/rRNA methyltransferase (SpoU) n=13 Tax=Bact... 231 4e-59 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 230 4e-59 Sequences not found previously or not previously below threshold: >UniRef50_P0AGJ6 Uncharacterized tRNA/rRNA methyltransferase yfiF n=148 Tax=Enterobacteriaceae RepID=YFIF_ECO57 Length = 345 Score = 352 bits (903), Expect = 1e-95, Method: Composition-based stats. Identities = 345/345 (100%), Positives = 345/345 (100%) Query: 1 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR 60 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR Sbjct: 1 MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR 60 Query: 61 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF 120 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF Sbjct: 61 DRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALF 120 Query: 121 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK Sbjct: 121 QSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 Query: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI 240 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI Sbjct: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI 240 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY Sbjct: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 Query: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA Sbjct: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 306 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 132/342 (38%), Gaps = 16/342 (4%) Query: 8 KSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDS 67 +SGK++ R+ KR P+ + G P + + +P R D Q Q K Sbjct: 15 RSGKLQPR--RAGQSVSKRVQRPK--RRDGDPKLALREAPVKPIRRDAQRQWPQGKMAPQ 70 Query: 68 PWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAI 127 P + + G + G+ + E+ +YG A +S+ + Sbjct: 71 PVGELDPGL-----STGETGILPGEVQPQADGNPETELEQEIIYGRQTVLAALKSQA-TL 124 Query: 128 VRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTT 185 R W + + +P+F L A V L + +H G+ Sbjct: 125 NRVWILPKLRYSPQFLSLLEEAKARGTVIDEVSPKRLNALTAGANHQGIAAQATPYQYVA 184 Query: 186 VQQWVSQAGA---QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIR 241 ++ V ++ ++ L+ +PHNLG + RS FG++G+V+ A + ++ Sbjct: 185 LEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRRAAGVTSTVMK 244 Query: 242 TAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYE 301 A G + N+ L+ ++ G+ V T+S P++ + LV+G E E Sbjct: 245 VAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTTSRGADPIYSADFQRPIALVVGSEGE 304 Query: 302 GLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 G+ + D + I G LN SVA G+ L E RQ Sbjct: 305 GISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHRQR 346 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 297 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 77/360 (21%), Positives = 140/360 (38%), Gaps = 30/360 (8%) Query: 11 KVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGR--RPARDDKQSQPRDRKWEDSP 68 K R D P+ + G +P + D + + D Q +PR R +D P Sbjct: 8 KFSPRSAR-GDKPRYGEQKPKLKRSGDKP-RFNDDQPQGFKEKSDRFQDKPRPRTNDDKP 65 Query: 69 WRTVSRAP----------------GDETPEKADHGGISGKSFIDPEVL---RRQRAEETR 109 R + GD+ P ++ GK+F + + Sbjct: 66 RRAGDKPSNFKSRFKDKDRDKPRYGDDRPRRSGQKPPFGKTFPAAPPPMDSEQAQEALDL 125 Query: 110 VYGENACQALFQSRPEAIVRAWFIQS--VTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG +A A + R W R++ ++ AN VD L + + Sbjct: 126 LYGHHAVLAALDGD-RQLNRIWITSHLRHDIRYRTKIQTAKANGTVVDEVDNFRLNQITH 184 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVK 224 +H G+ + + + + +A +Q ++ +++ ++PHNLG ++R+ FG + Sbjct: 185 NANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFGAQ 244 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 G+V+ + ++ A G EH N+ L+ +++G+ + T + + L Sbjct: 245 GMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGTVAGKQTAL 304 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L M LV+G E EGL + D + I G LN SVA + L E +RQ Sbjct: 305 HQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFRQR 364 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 105/244 (43%), Gaps = 5/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 E+ ++G N +S E I + + ++ + + + D L++ Sbjct: 2 EEQNVIFGRNPVIEAIKSGKE-IEKIYVSKTAGGNISKIINFAKEAGIVVSTTDNDTLSE 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 +G+ +H GV L V + Q + +L L+ ++PHNLG ++RS F Sbjct: 61 LAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAEAF 120 Query: 222 GVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV G+++ + + ++T+ G EH++ NI N + D ++ G +V T Sbjct: 121 GVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVNAE 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K + + + V+G E +G+ D VKI G + LN SVA +L+ + Sbjct: 181 KSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQVV 240 Query: 341 RQNK 344 + K Sbjct: 241 SKRK 244 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 74/343 (21%), Positives = 126/343 (36%), Gaps = 17/343 (4%) Query: 17 VRSDDDSDKRTHNPRTGK----GGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTV 72 R ++ T P GK G R + R+ + R + Sbjct: 5 PRKIISTNTSTGEPNRGKPIKIKGKRVVSNPTRNPRKIDSNPISVANPTRNPRKIDSNPI 64 Query: 73 SRAPGDETPEKADHGGISGKSFIDPEVLRRQ-------RAEETRVYGENACQALFQSRPE 125 S A P K D ISG S + + +YG + + Q + Sbjct: 65 SVANPTRNPRKIDSNTISGNSRQRNSNFSQSPVSTQPIEEDNDIIYGRHPVLSALQ-KQR 123 Query: 126 AIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNG 183 + R W + P F L N V+ L + +H GV Sbjct: 124 NLNRIWITTRLRYDPSFHHFLLQAKENGTVIDEVEPKRLDYLTNGANHQGVAAQTAPYGY 183 Query: 184 TTVQQWVSQAG--AQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAI 240 + + Q+ ++ + ++PHNLG ++R+ G +G+V+ A + + Sbjct: 184 IELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIGAQGLVIPQRRASGITSTVM 243 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEY 300 + A G E+ N+ L++ ++AG+ + T++ +P+ + +VLV+G E Sbjct: 244 KVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAASGSEPVHTVNFKGPIVLVIGSEG 303 Query: 301 EGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 EGL + D V I G LN SVA G+ L E +RQ Sbjct: 304 EGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYRQR 346 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 129/330 (39%), Gaps = 13/330 (3%) Query: 26 RTHNPRTGKGGGRP---GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSR--APGDET 80 R P+ +P K + + R R + D+ + P Sbjct: 6 RPQRPKRPSTKAKPYSAAKPKTKRPAKLVRKATGEVSRPERPRDATRTAKVKDITPTGAG 65 Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TP 138 P V+ AE +YG+ + A Q+ + R W + + P Sbjct: 66 SRAPKTIKTRMAPEAAPTVVESDEAE--LLYGKQSVLAALQNS-RPLNRVWLTEKLRYDP 122 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ--AGAQ 196 RF L A +V+ L + + +H GV ++ ++ Sbjct: 123 RFLRLLDAAKAGGAVIDIVEPRRLDQLTAGGNHQGVAAQAAAHPYVEFEELIASLVERPD 182 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITG 255 +LA + +PHNLG ++RS FG +G+++ A+ + + A G EH+ Sbjct: 183 PVLLAADGIEDPHNLGALIRSAEAFGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIARV 242 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 N+ ++ ++AGY VV T + + L++ L +V+V+G E +G+ + D V Sbjct: 243 TNLNQAIERLKEAGYQVVGTQEKASQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMV 302 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 I G LN SVA G++L E RQ +A Sbjct: 303 SIPLAGKTTSLNASVAGGIMLYEVMRQRRA 332 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 112/302 (37%), Gaps = 10/302 (3%) Query: 47 GRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAE 106 + R+ + + K + ++ K + G + R Sbjct: 2 NSKLKRNISSGKFMEDKDKSVTESKGKAKSYNQVKNKNKKDNMVGNDKSTSAIEER---- 57 Query: 107 ETRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELTKA 165 E V G NA + I + + K + N+ VD+ +L Sbjct: 58 EDIVIGRNAVIEALR-GERTIEALYISNSKLEGSIKTIVGLAKENKILIKEVDKRKLDSM 116 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 G E H GV + + V + + G ++ L+ +PHNLG ++R+ FG Sbjct: 117 CGGEVHQGVIAKVTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFG 176 Query: 223 VKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V G+++ + S +++ G EHV+ N+ + +++ ++ G + + Sbjct: 177 VHGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEE 236 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 ++ +++G E G+ + D +KI G + LN SVA G+++ E + Sbjct: 237 YSYQVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLK 296 Query: 342 QN 343 Sbjct: 297 GR 298 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 6/272 (2%) Query: 77 GDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQ-S 135 G + +KA S + R + R+ G N+ ++ I + + Sbjct: 5 GKKDYKKAKTSQRSDVKLNGRKEERDGAKDLDRIEGRNSVLEAIKAG-RTINKILVPKGE 63 Query: 136 VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---Q 192 ++ + D + L K S T H GV + ++ V + Sbjct: 64 KEGSIRQIIALARERGIVVQETDRSNLDKISTTHAHQGVIAYVAFKDYVEVDDILKIAQD 123 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQ 251 G ++ L+ ++ +NLG ++R+ G GVV+ + + A + + G E+V Sbjct: 124 KGEDPYIIILDGITDAYNLGSILRTADAVGAHGVVIPKRRAIGLNAAVSKASAGAIEYVP 183 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPN 311 NI ++ ++ +V T KP F+ L + LV+G E EG+ + Sbjct: 184 VARVTNISQTIEYLKKKNIWIVGTDLSGEKPFFEADLKGPVALVIGSEGEGMGRLVSEKC 243 Query: 312 DLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D V I G ++ LN +VA +++ E RQ Sbjct: 244 DFIVNIPMQGKISSLNAAVAAAIIMYEIRRQR 275 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 87/339 (25%), Positives = 140/339 (41%), Gaps = 14/339 (4%) Query: 14 VMYVRSDDDSDKRTHNPRTGKG--GGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRT 71 + DD KR++ R +G P + R+D + D+ + DR R Sbjct: 199 PRFSGRPDDDGKRSYERRDDQGTRSSAPNRFRSDRPAQGRFRDRSERSPDRYRSGDERRQ 258 Query: 72 VSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAW 131 S P D G S + + PE + ++G +A QA +S I R W Sbjct: 259 SSP-----RPRFGDSGPRSQRPNLQPEAEASTPPADDLIWGRHASQAALESG-RPIHRIW 312 Query: 132 FIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQW 189 + P+F + LR + V A L + +G H G+ + + Sbjct: 313 CTPEMRSAPKFLQLLREAKTSGVLVEEVTWARLAQVTGGSVHQGIALQTAAADTLDLSAL 372 Query: 190 VS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEG 245 + + G +LAL+ ++PHNLG ++RS G G+V+ + +G+A + A G Sbjct: 373 IEGCSELGEPPLLLALDGITDPHNLGAVVRSAEAMGAHGLVLPQRRSAGLTGSAAKVAAG 432 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 EH+ N+ L+ + +GY V+ ++E L L +VLV G E +GL Sbjct: 433 AMEHLPVARVVNLNRSLEKLKDSGYRVIGLAAEGDVTLMDVDLEGPLVLVTGSEDQGLSL 492 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 R D V+I G LN SVAT + + E R+N Sbjct: 493 LTRRHCDQLVRIPLRGITPSLNASVATALCVYEVARRNW 531 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 111/243 (45%), Gaps = 8/243 (3%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKA 165 + V+G NA + + + + + R +E L + +++ ++ + Sbjct: 2 KELVFGINAVSEALK-GQRRVYKIYAQRERQDKRLEEILTLAREKQLKLQYLEKKKMDEL 60 Query: 166 SGTEHHGGVCFLIKKRNGTTV----QQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + H G+ +++ + ++ +Q +L L+ +P NLG ++R+ Sbjct: 61 CEGK-HQGIIAEVERYPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRTAECA 119 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV G+++ + + R + G EH+ I +N+VN + +Q G+ V+ ++ Sbjct: 120 GVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGADAKAR 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + F TS+P+ LV+G E +G+ R+ D+ V+I G + LN SVA +L+ E Sbjct: 180 QSYFNTSIPSPTALVIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEVL 239 Query: 341 RQN 343 RQ Sbjct: 240 RQR 242 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 3/242 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT 163 A + +YG +A A P++IV + + R +E L A + D L Sbjct: 2 ANQRPIYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEKAANENIRVYFADADRLN 61 Query: 164 KASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 S H GV I +N ++ + +L L+ ++PHNLG +R+ G Sbjct: 62 AISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMG 121 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V V+ D + + + A G AE V IT N+ L + ++ G ++ T Sbjct: 122 VHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGES 181 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ +LP V+G E +G+ R+ D+ V I G V +N+SV+ G++L E R Sbjct: 182 DLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRR 241 Query: 342 QN 343 Q Sbjct: 242 QR 243 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 4/242 (1%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG + +SR + + PR + + + + L + + Sbjct: 2 DVIYGIHPVSEALKSRGRSFQYVAIAKDRMDPRVQRIVEDARESGITVRFLPRDFLDRTA 61 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 T H GV + K+ + + + G V+ L+ +PHNLG ++RS GV G Sbjct: 62 NTNMHQGVIAVTSKKEYLDLDDIIEKKRGEHAFVVVLDGIEDPHNLGALIRSADGAGVDG 121 Query: 226 VVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA-GYTVVTTSSEQGKPL 283 VV+ + + +G A++ + G AE+V NI ++D + V + Sbjct: 122 VVIPERRAVGVTGTAMKASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLDERGTQNY 181 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + LVLG E +GL D R DL VKI G V+ LN+SVA G+++ E RQ Sbjct: 182 DEIDYNMSLALVLGAEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQR 241 Query: 344 KA 345 +A Sbjct: 242 RA 243 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 5/266 (1%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRF 140 + + + K + R V G + S + + ++ PR Sbjct: 5 ITSSNNQVIKKVASLKQKKYRDEYNLFVVEGIRLVEEAAGSTWRPAMCFYTEKAAAAPRV 64 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 + L +AA V + K + TE G+ +++K+ T Q+ ++ ++ Sbjct: 65 QATLEILAAKGCRIFPVADNVYAKITDTEQPQGILCVMEKKRYT-FDDL--QSSDRELIV 121 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIV 259 L+N +P N+G ++R+ G GV++ A L SG +R G H+ ITG Sbjct: 122 VLDNVQDPGNVGTVVRTADAAGCCGVILTKGCADLFSGKTVRATMGSLFHLPVITGVAEQ 181 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 V + G ++ T+ + L + + +V G E G+ + D R+ I Sbjct: 182 EVAAFLERQGIRLLATALDSSSLYHDVDLRSPVAIVFGNEGAGVSKVILEKADERLYIPL 241 Query: 320 TGNVAGLNISVATGVLLGEWWRQNKA 345 G LN++VA V+L E RQ + Sbjct: 242 YGRAESLNVAVAAAVILYEARRQRRV 267 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 98/266 (36%), Gaps = 8/266 (3%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP- 138 ++ R V G + ++I + + + Sbjct: 2 NYIQSSQNSTIKDIKSLHLKKNRDAHGLYFVEGIRFVSDAIDNG-QSIAKIIISEKLEGL 60 Query: 139 -RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 E + + +V E + S T+ G+ +IKK + + +++ + Sbjct: 61 NGGSELIEKVKGACSDISLVPEKIFREVSDTQTPQGILAVIKKNKY-SFDKVITEGSS-- 117 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGD 256 V+ L+ +P N G ++R+ G+ V++ L S +R+ G H+ G Sbjct: 118 -VVILDCLQDPGNAGTIIRTADAAGISAVLMSKGCVDLYSPKVLRSTMGSVFHIPIFEGL 176 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 NI ++ +Q Y V+ + F+ L + +++G E G+ D D VK Sbjct: 177 NITEIIRVLKQNDYKVIASHLSGKNNYFQEDLTGRSAIIVGNEANGISDETAYMADSLVK 236 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQ 342 I G LN SVA V++ E RQ Sbjct: 237 IPMPGKAESLNASVAASVMIYEIVRQ 262 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 100/239 (41%), Gaps = 6/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 + G+N + S + I + + E + VD++++ K S T Sbjct: 4 IEGKNPVKEALNSSTQ-ITEVYISNTTKDKSISEIINLCKQKGIVVKFVDKSKIDKMSKT 62 Query: 169 EHHGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 ++ GV + ++ + + + G + ++ L+ ++PHN G ++RS G G Sbjct: 63 KNPQGVIAIAQEYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHG 122 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 ++ + + + + + G EH++ N+ +D ++ G V + K ++ Sbjct: 123 IITEARNSCPITPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAEKFVY 182 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + +++G E +G+ ++ D VKI G + N SVA G++ E +Q Sbjct: 183 DCDFKIPICIIIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQR 241 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 97/242 (40%), Gaps = 7/242 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELTKA 165 + V G N + + + + F K+ + VD+ + K Sbjct: 2 QYLV-GRNPVMEALEMD-MGVTNIYIQKGELKGFIKKIEKKAYDMGIRVEYVDKKYIEKF 59 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 + H GV + ++V + + + ++ L+ ++PHNLG ++R+ G Sbjct: 60 AENTAHQGVMAKMPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVAG 119 Query: 223 VKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 GV++ A + AI+T+ G +++ NI ++ ++ + E + Sbjct: 120 CHGVIIPKHRACEVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWIYGACGEASQ 179 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 + +L + LV+G E +G+ R+ D +KI G LN S A +L+ E R Sbjct: 180 THTQANLKGPIGLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIR 239 Query: 342 QN 343 Q Sbjct: 240 QR 241 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 3/242 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT 163 + + ++G +A A P++++ W R K L A H+VD+ L Sbjct: 2 SNKRLIHGFHAINARLWQNPKSLIEIWLAGGRHDARAKAVLDKAGAENVKLHIVDKERLD 61 Query: 164 KASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 SG H GV +I N + + +L L+ ++PHNLG +R G Sbjct: 62 SMSGNARHQGVVAMIDASMNYVDLDDVLENLSEPPLLLILDGVTDPHNLGACLRVADAMG 121 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V+ D + + + A G AE V IT N+ L D + AG + T+ E Sbjct: 122 AHAVIAPKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEADT 181 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ + V+G E EG+ R+ D+ V I G V LN+SV++G++L E R Sbjct: 182 DLYHFDASGPLAWVMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRR 241 Query: 342 QN 343 Q Sbjct: 242 QR 243 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 122/342 (35%), Gaps = 21/342 (6%) Query: 14 VMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVS 73 S SD + P K + + + + E + V Sbjct: 38 PKLKSSGQSSDPNSSRP----------KPQRKLSAQRTQRSAKVFSGAAGNEGYKGKKVI 87 Query: 74 RAPGDETPEKADHGGISGKSFIDPEV-----LRRQRAEETRVYGENACQALFQSRPEAIV 128 G E+ G G P + +YG + A +S + Sbjct: 88 EVSGTGRGEQNQTPGYRGGDRPAPGAPSHFTKESTDGDSDLIYGRHTLLAALESE-RQLN 146 Query: 129 RAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTV 186 R W + + PRF L A VD L + + H G+ + + + Sbjct: 147 RIWVVNQLRYDPRFHSLLLQAKAAGVVIDEVDYLRLDQITAHAKHQGIAAQVAPYSYLEL 206 Query: 187 QQWVSQAG--AQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTA 243 + +LA + ++PHNLG ++R+ G +G+VV A+ + + A Sbjct: 207 DTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGAQGLVVPQRRAVGITSTVAKVA 266 Query: 244 EGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGL 303 G EH N+ L+ + AG+ + ++ KP++ +VLV+G E GL Sbjct: 267 AGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATAAKPIYSVEFSGPVVLVVGAEGTGL 326 Query: 304 PDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 A+ D V I G LN SVATG+ L E +RQ + Sbjct: 327 SLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQRSS 368 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 105/243 (43%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTK 164 E+ + G +A + S I + W + + + L+ + V +++L Sbjct: 2 EDIVIVGRHAVKEAIVSG-HTINKIWIQEGIRKQQINDILQNAKEQKLIVQTVPKSKLDN 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHF 221 + H GV LI Q++ + V+ L+ +PHNLG ++R+ Sbjct: 61 LA-NAPHQGVAALIAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADAS 119 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV GV++ ++ + + + G +HV + N+ +D+ ++ GY V ++ Sbjct: 120 GVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAEADNA 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + +V+G E +G+ +D D +KI G+V LN SVA +++ E + Sbjct: 180 TDYRDMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEVY 239 Query: 341 RQN 343 R+ Sbjct: 240 RKR 242 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTK 164 E+T + G +A + + I + + + + E L+ + V +++L Sbjct: 2 EDTVIVGRHAVREAIITG-HPINKILIQEGIKKQQINEILKNAKDQKIIVQTVPKSKLDF 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLALENESNPHNLGGMMRSCAHF 221 + H GV LI Q++ Q ++ VL L+ +PHNLG ++R+ Sbjct: 61 LA-NAPHQGVAALIAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADAT 119 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV GV++ ++ + + + G EHV I N+ +D+ + G+ V T + Sbjct: 120 GVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEANNA 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + +V+G E +G+ D D +KI G+V LN SVA +++ E + Sbjct: 180 TDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEVF 239 Query: 341 RQN 343 R+ Sbjct: 240 RKR 242 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 6/246 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 ++ ++YG +A QAL Q P+ + + W + + PR + L A NR + E+ Sbjct: 2 SQLEKIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMD 61 Query: 164 KASGTEHHGGVCFLIKKRN---GTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 H GV + +++ + + +L L+ ++PHNLG +R+ Sbjct: 62 AWVEGV-HQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADA 120 Query: 221 FGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G V+V D + + + A G AE + + N+ L+ +Q G VV T+ E Sbjct: 121 AGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEA 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + +++ L +V+++G E +G+ R+ D VK+ G+V+ LN+SVATGV L E Sbjct: 181 EQEIYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEA 240 Query: 340 WRQNKA 345 RQ + Sbjct: 241 VRQRQV 246 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 7/240 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFK-EALRWMAANRKAYHVVDEAELTKASG 167 V G+N + + R + + F+ E L+ + V L K Sbjct: 6 LVPGKNPVVEAIRGN-RKVFRIYISKDSNKNFQDEMLKLAQQHNINLDKVPLDRLDKMVP 64 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVS----QAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 T H G+ + + + + +L L++ ++P N G ++R+ GV Sbjct: 65 TTEHQGIVAETEPFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAVGV 124 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ ++ + ++ + G AEHV I N+ + ++ ++ T + + Sbjct: 125 DGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGDRG 184 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +F+ + + LV+G E G+ + D I G V LN SVAT V+L E +RQ Sbjct: 185 IFEENYNIPLALVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQ 244 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 7/256 (2%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANR 151 + + ++ E + G NA F+S + + + + + +R + Sbjct: 10 KKMHDKKSYDKKENENIIEGRNAVMEAFRSGK-PVDKLYVLDGCQDGAVRSIIREARKHD 68 Query: 152 KAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNP 208 + V++ L + S T H GV + V+ + + G ++ L+N +P Sbjct: 69 TILNFVEKDRLNQLSETGKHQGVIASVAAYEYAEVEDMLKLAEEKGEDPFLIILDNIEDP 128 Query: 209 HNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 HNLG ++R+ G GV++ + + RT+ G + N+V ++D ++ Sbjct: 129 HNLGAIIRTANQAGAHGVIIPKRRAVGLTATVARTSAGALNYTPVAKVTNLVKTMEDLKK 188 Query: 268 AGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLN 327 G V + ++ ++ + LV+G E EG+ +D D +I G++ LN Sbjct: 189 KGLWFVCADMDGDV-MYDVNMKGPIGLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLN 247 Query: 328 ISVATGVLLGEWWRQN 343 SVA GVL E RQ Sbjct: 248 ASVAAGVLAYEIVRQR 263 >UniRef50_C6CLV0 tRNA/rRNA methyltransferase (SpoU) n=25 Tax=Enterobacteriaceae RepID=C6CLV0_DICZE Length = 397 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 220/395 (55%), Positives = 260/395 (65%), Gaps = 52/395 (13%) Query: 1 MNDEMKGKSGKVKVMYVRSDDDSDK-----RTHNPRTGKG-------------------- 35 M+D + GK GKV+VMYVRS+D +K RT + R G G Sbjct: 1 MSDTLSGKGGKVRVMYVRSEDGDEKNGKPKRTSDKRRGDGDNTRGGGRKGRDGAPRGGRD 60 Query: 36 ----GGRPGKSRADGGR--RPARDDKQSQPRDRKWEDSPWRTVS---------------- 73 GGR R G R RD+ + RD WR S Sbjct: 61 NAERGGRDNAERGGRGNAERGGRDNAERGGRDSAERGGKWRGESAGRERPRPPRREPVEH 120 Query: 74 -----RAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIV 128 + E DHGGISGKS +DPE +RRQRAEETRVYGENACQALF SRPEAIV Sbjct: 121 ADSPWKTVSRAPGETPDHGGISGKSQVDPEQIRRQRAEETRVYGENACQALFLSRPEAIV 180 Query: 129 RAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQ 188 R WF+Q VTPRF++ALRWMAANRKAYHVV++ EL +ASGTEHHGGVCFLIKKR G V Sbjct: 181 RGWFLQEVTPRFRDALRWMAANRKAYHVVEDDELVRASGTEHHGGVCFLIKKRQGLDVAA 240 Query: 189 WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAE 248 ++ +AG DCVLALE+ NPHNLGG+MRSCAHFGVKGV+V DA+ LESGAA+RTAEGGAE Sbjct: 241 YLREAGETDCVLALEDVGNPHNLGGIMRSCAHFGVKGVLVNDASQLESGAAVRTAEGGAE 300 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 HV+ I+ + +V+ L FR AGYT+VTTSS +G L K +LPAK V+VLGQE +GL D+A Sbjct: 301 HVKAISAEGLVDALAQFRAAGYTIVTTSSHKGTTLSKVALPAKSVIVLGQEGDGLSDSAW 360 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D++V IDGTGNV LNISVATG+LL EWWRQ+ Sbjct: 361 QQGDVKVSIDGTGNVESLNISVATGILLAEWWRQH 395 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 108/263 (41%), Gaps = 9/263 (3%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ I ++ + R + + + G ++ I + + Sbjct: 4 IESKENTIYKEAKKLKDRKNRNKINKYVIEGFRLVDEAIKAN-LDIDYLILTEIGYEKLD 62 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 + + + + + + + TE+ G+ ++K N D L Sbjct: 63 NYIDKDKIKKHKVYCITDTLFKELASTENPQGIIAIVKMNN-------KKLDFQGDFYLF 115 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 + +P NLG ++R+ GV G+V+ + + IR+ G ++ D+ + Sbjct: 116 CDKVQDPGNLGTIIRTAHAAGVNGIVLSKGTVDIYNEKTIRSTMGSLFYMPIYYDDDEFS 175 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 ++ ++ G+T++ TS E K FK L K++L +G E G+ + D D RVKI Sbjct: 176 LIKSLKKDGFTLIVTSLESSKDFFKEDLKGKIILTVGNEGNGVSNEVLDLADRRVKIPMP 235 Query: 321 GNVAGLNISVATGVLLGEWWRQN 343 G LN+++AT +++ E RQN Sbjct: 236 GGAESLNVAIATSIIIYEKVRQN 258 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 53/238 (22%), Positives = 111/238 (46%), Gaps = 6/238 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG+N + ++ + + + + + + +VD++E K G Sbjct: 7 YIYGKNTILEALKGDK-SVYTVYVQNNA--KDNGIIEQCKRKKIPFKIVDKSEFIKKLGN 63 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H GV I++ ++ + ++ G Q +L L+ +PHNLG ++R+C GV GV Sbjct: 64 VSHQGVMAEIEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIGVDGV 123 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ ++ ++ +G + + G +HV+ N+ L+D ++ + VV ++ + + Sbjct: 124 IIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDLDKSQDYRQ 183 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +V+V+G E G+ + D+ V + G+V LN SVAT V+L + + Sbjct: 184 VDYNMPLVIVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYNSR 241 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 11/321 (3%) Query: 31 RTGKGGGRP-GKSRADGGRRPARD-DKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 R+GK P G R G R + D DK S D + D P ++ G E Sbjct: 18 RSGKYASSPSGSKRTKFGTRKSFDPDKSSSKPDWQKGDRPRKSSDHL-GKSRVEGNRIRQ 76 Query: 89 ISGKSFIDPEVLRRQR-AEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALR 145 + +D +YG +A +A ++ ++ R W + F+ + Sbjct: 77 SFSRDHLDSRFESIDEDTSPDLIYGRHAVEAAIEAG-RSLNRLWVNAKLHYDSHFRPLIA 135 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLAL 202 AN V+ L++ + H G+ + ++ V QA + ++A Sbjct: 136 TAKANGSVVDEVENVRLSQMTQGASHQGIVAQVSAYEYVDLEVLVQQAKNKARRPVIVAA 195 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + ++PHNLG ++RS G +G+V+ A+ + + + G E++ N+ Sbjct: 196 DGITDPHNLGAIIRSAEAIGAQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVINLGRA 255 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 L+ + + + ++E + + T A +VLV+G E GL + ++ D V I+ +G Sbjct: 256 LEYLKSNSFWIYGLTAEAAQSIHTTDFSAPVVLVVGAEGSGLSLSVQNLCDQLVSIELSG 315 Query: 322 NVAGLNISVATGVLLGEWWRQ 342 LN SVATG+ L E +RQ Sbjct: 316 KTPSLNASVATGMALYEIYRQ 336 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 6/243 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG +A +A+ PE + A+ ++ R L + + + L + Sbjct: 4 EFIYGIHAVRAVLDKEPERFIEAYVLKGRQDDRLMPILNELQMVGVSLQQMTRKTLDDKA 63 Query: 167 GTEHHGGVCFLIKK---RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 +H G+ +K N + +++ A +L L+ ++PHNLG +R+ GV Sbjct: 64 HGANHQGIIARVKPAKQLNENDLDDILAK-HASPLLLILDGVTDPHNLGACLRNADAAGV 122 Query: 224 KGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 V+V D + + + A G AE V + N+ + ++ G +V T+ E Sbjct: 123 AAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIVGTAGEATHD 182 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +++ L + +V+G E +G+ R+ D +KI G V+ LN+SVA+G+ L E RQ Sbjct: 183 IYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQ 242 Query: 343 NKA 345 A Sbjct: 243 RLA 245 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 7/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 VYG NA L QS + + + RF++ + A + + VD+A L + + Sbjct: 4 EIVYGRNAVWELLQSGK-PVNKLLLQGEGTAGRFQDIVSHARAQKIPFQFVDKAALDRLT 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 H G+ + R V ++ + G +L L+ +PHNLG ++R+ GV Sbjct: 63 EKAKHQGILAYVAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGV 122 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ ++ + +T+ G EHV N+V L D ++AG V +E + Sbjct: 123 HGVIIPKRRSVSLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAEGTE- 181 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 ++++ L V+V+G E +GL ++ D V + G + LN SVA +L+ E RQ Sbjct: 182 VYRSDLTGARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQ 241 Query: 343 N 343 Sbjct: 242 R 242 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 10/257 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + ++ RQ+ + G+ A + S I +F P E + Sbjct: 9 KNDLVKRAASLKMKKYRQKEGLFLLEGKRAVEEALASG-WTIRALFFT--RLPEGWE--Q 63 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + ++ V L K + TE V L++ R ++ + A + VL L+ Sbjct: 64 QAENSSLPWYEVPLPVLQKITATEDPQSVAALVELRR----EELAAFAPERGMVLVLDRI 119 Query: 206 SNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P NLG ++R+ G GVV+ ++ A L + +R+ G H+ TG + + Sbjct: 120 RDPGNLGTLIRTADALGAAGVVLLENTADLYNPKVVRSTMGSLFHLPVFTGVKTGELEEW 179 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 RQ GY + T+ E + + + + P K LVLG E EG+ D +VKI G+ Sbjct: 180 CRQHGYALWATALEGAEDMTRLTWPEKTALVLGSEAEGVSPEILAAADQKVKIPMAGHAE 239 Query: 325 GLNISVATGVLLGEWWR 341 LN++VA G+++ E R Sbjct: 240 SLNVAVAGGIVMFEAAR 256 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 7/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 VYG +A Q+ + + + + + A + L++ + Sbjct: 20 DIVYGVHAVTESLQAN--TGNKLYIQEDLRGKKVDNIKSLATQKKVAISWTPKKTLSQMT 77 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGA--QDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G + T V + + A +L L+ ++PHNLG ++R+ V Sbjct: 78 DGAVHQGFVLRVSAFAYTDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNVC 137 Query: 225 GVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GV++ ++ + +T+ G EH+ N+ LD + G+ + T P Sbjct: 138 GVIIPKHRSVGVTPVVSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNG-TPS 196 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + K+ LV+G E +G+ + D + I G+V LN SVA +L+ E +R Sbjct: 197 DCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRNR 256 Query: 344 K 344 + Sbjct: 257 R 257 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 6/241 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG +A + + P+ IV+ + ++ R + + A ++ EL S Sbjct: 7 IYGIHAVSGVLDAAPQRIVKLYVQENRDDQRLQSLVEKAKALGVKVILLSRTELNTLS-N 65 Query: 169 EHHGGVCFLIKKRNGTT---VQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 E H G+ ++ + + + +L L+ +PHNLG +RS FGV+ Sbjct: 66 EKHQGIVADCEEVENLDESALLSLLKKRETPALLLILDGVKDPHNLGACLRSANAFGVRA 125 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 V+ D A+ + + A G AE I N+ +D ++ G +V T+ E + Sbjct: 126 VIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETLIQ 185 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + L + +VLG E GL ++ D +I G+V LN+SVA G+ L E RQ + Sbjct: 186 EIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQRE 245 Query: 345 A 345 A Sbjct: 246 A 246 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 126/336 (37%), Gaps = 11/336 (3%) Query: 15 MYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQ---PRDRKWEDSPWRT 71 + R +S R + + + R+ + R + Sbjct: 82 RFERKSTNSSYRNQDSQETNNYRGSNRFERKSTNSSYRNQDSQETNNYRGSNRFERKSTN 141 Query: 72 VSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAW 131 + + + + + E + + ++G ++ +A AI R W Sbjct: 142 PAYRNKNSQRASSYKREENNEPLSYSESFSKT-LSDDLIWGRHSTEAALV-GGRAIHRIW 199 Query: 132 FIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQW 189 + TP+F + L+ A+ V + L + + H G+ I ++ Sbjct: 200 CTSELRSTPKFFQLLKDQKASGVLVEEVSWSRLGQLTNGAVHQGIVLQIAASKTLDLKNL 259 Query: 190 VSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEG 245 + G +LAL+ ++P NLG ++RS G +G+++ + +G+ + A G Sbjct: 260 IDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALGAQGLILPQRRSAGLTGSVAKVAAG 319 Query: 246 GAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPD 305 EH+ N+ L+ + GYTVV + E L + +V+V+G E +G+ Sbjct: 320 ALEHLPVARVVNLNRSLEKLKDEGYTVVGLAEEGSSTLSEIKFQGPLVVVVGSEDKGISL 379 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 R D V+I G LN SVAT + L E R Sbjct: 380 ITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVAR 415 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 64/345 (18%), Positives = 145/345 (42%), Gaps = 12/345 (3%) Query: 3 DEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDR 62 D K + + +S DD ++R R R +R D +R +++ + Sbjct: 79 DNFKRRDDSKRRDNFKSRDDLNRRYDFNRRDNFKRRDDSNRRDDFKRRDDYERKGAIKSN 138 Query: 63 KWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLR-----RQRAEETRVYGENACQ 117 ++ + R +++ + +++ + + +R E ++G+++ Sbjct: 139 EYSYLKSKEKPRNSFNQSQTRFSSNAQQTENYSENSSKKFQLSPNERNYEDWIWGKHSVF 198 Query: 118 ALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVC 175 A S I R W + + +F L+ + + V + L++ + H GV Sbjct: 199 AALNSE-RPINRIWCTSEIFSSEKFYLLLKDLKSKGVLIEEVPWSRLSQLTSGAVHQGVA 257 Query: 176 FLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DA 231 ++++ + + ++ ++AL+ ++PHN G ++RS F KG++V Sbjct: 258 LQHASTESISLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIRSAEAFDCKGIIVPQRR 317 Query: 232 ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAK 291 + +G + A G EH+ N+ +D+ ++ G+ ++ S + P+ + A Sbjct: 318 SAGLTGTVAKVAAGALEHIPVSRVVNLNRAIDELKKKGFIIIGLSGDGQVPISEFKEKAP 377 Query: 292 MVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 +V+++G E +G+ + D +KI G + LN SVA + L Sbjct: 378 VVVIVGAENKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 16/272 (5%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 + + S I + R R G + + E +V +F +S ++ + Sbjct: 9 STSNQRVKELSQIQKKSKIRSREGIFIAEGIRMVRE---TPHERLVGLYFSESFEKKYGK 65 Query: 143 A---------LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA 193 L+ RK ++ +A + S T+ GV ++ + T Q Sbjct: 66 EVLDVISGGDLKVREQIRKKTEILSDAVFSYVSDTKTPQGVLAVVHQMEYTLGQM---TE 122 Query: 194 GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQP 252 GA ++ L+N +P NLG + R+ GV G+++ D + + IR+ G + Sbjct: 123 GAIPHLMILDNLQDPGNLGTIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPF 182 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 + +++ + ++ + K ++G E GL + D Sbjct: 183 VYVEDLRETIHTLKEKNIKSYAAHLDGKNTYDKEDYRQGTAFLIGNEGNGLREEIAQCAD 242 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 ++I G V LN +VA VL+ E RQ + Sbjct: 243 TWIRIPMCGQVESLNAAVAATVLMFEVSRQRR 274 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 111/308 (36%), Gaps = 21/308 (6%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 GK R G R ++ + T + ++ + Sbjct: 4 GKKRRKTGARGSKLRNDVTMEGKALNRKKNNTSRKNMKNKNRDAKKTDL----------- 52 Query: 100 LRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDE 159 + VYG N + + I + +F K + +D+ Sbjct: 53 -----GNKFFVYGRNIVEEALIHSAKYIEKIYFSSKKKKNQKGIEDLAISKGLRPEYIDD 107 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMR 216 E+ + G + K + + A G + VL L+ +P NLG ++R Sbjct: 108 DEIAEFISENDAQGCIAVFNKFAYRDIDDALRLADIRGEKPLVLVLDRIEDPRNLGAIIR 167 Query: 217 SCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 + GV G+++ +D A + + +EG + I N+ L D +Q G+ V Sbjct: 168 TARCAGVHGIIIAKDRAAGITPTVAKVSEGAIFSIPCIMVTNLAAALKDLKQRGFWVYAA 227 Query: 276 SSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVL 335 + F+ + LVLG E +G+ + +D +V I + LN+SVA G+L Sbjct: 228 DANGD-SCFEQEFGGSVALVLGNEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGIL 286 Query: 336 LGEWWRQN 343 + E R+N Sbjct: 287 MYEIVRKN 294 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 106/264 (40%), Gaps = 4/264 (1%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + + RQ+ + V G + S + + + Q+ + Sbjct: 2 ITSSQNLRVKLVKKLAQRNFRQKERKLAVEGIRFVEEALSSTWQTEILLYTDQACQAQRG 61 Query: 142 EAL-RWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 + L V +A + + S TE G+ ++++ + T ++ + + + V+ Sbjct: 62 KILLDLARDKGVEVLAVSDAIMKELSDTETPQGMLAVLRQPDYT-LEDII-RPDQKPLVV 119 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIV 259 ++ +P NLG ++RS G GV++ + + + +R G H+ I ++ Sbjct: 120 IVDGVQDPGNLGTIIRSADAAGASGVILLKGTVDIYNPKTLRATMGSLFHLPVIQVSDVN 179 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L+ G T++ G P+FK +L + +++ E G + N ++ I Sbjct: 180 EALEYLASIGVTLLVGEPAGGIPVFKANLQTPVGIIVANEGAGPREEIFRYNHQKITIPM 239 Query: 320 TGNVAGLNISVATGVLLGEWWRQN 343 G LN+++AT ++L E RQ Sbjct: 240 PGCAESLNVAIATSIILYEAIRQR 263 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 63/252 (25%), Positives = 103/252 (40%), Gaps = 9/252 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEA 160 R + E+ ++G + AL +S P+ I + + R + + + + Sbjct: 2 RNQPEKEFIFGFHTITALLKSAPQKIDTLYCREDRQDKRVQSIRNLAKLHGIPIGTLSKV 61 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQW-------VSQAGAQDCVLALENESNPHNLGG 213 + + + H GV IKK + Q + +L L+ +PHNLG Sbjct: 62 QCNEIAPNAVHQGVFAKIKKTSRLNEQDLMIFLHHRLHNNLNPPFLLVLDGVQDPHNLGA 121 Query: 214 MMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 +RS GV V++ D A+ ++ +TA G AE T N+ L+ ++ G Sbjct: 122 CLRSANAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLFTVTNLATCLERLKKCGIWC 181 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + ++ L + LVLG E +GL + D V I G V LN+SVA Sbjct: 182 YGLDQSGTRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCDDLVAIPMVGTVGSLNVSVAA 241 Query: 333 GVLLGEWWRQNK 344 GV L E RQ + Sbjct: 242 GVGLFEVVRQRQ 253 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 8/246 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-----RFKEALRWMAANRKAYHVVDEAEL 162 +YG + + ++ + + + + + + +L Sbjct: 2 DVLYGLHPVEEALRAGSRKFDHVCVSRERQDHGAAQKLQRIVDLCRSEGVRLRFENREQL 61 Query: 163 TKASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSCAH 220 T+ + T H GV ++++R+ T++ ++ G +LAL+ +P NLG ++RS Sbjct: 62 TRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADG 121 Query: 221 FGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV GV++ + + S A++T+ G AEH++ N+V L+ ++ V Sbjct: 122 AGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLDERG 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 V+VLG+E EGL D R D V+I G V+ LN+S A V+L E Sbjct: 182 TMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEA 241 Query: 340 WRQNKA 345 RQ + Sbjct: 242 ARQRRV 247 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 3/237 (1%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G NA + +V + PR +E + A + +L K G Sbjct: 4 YLFGLNAVFEAL-GQGRKVVALYVEAQRNPRLEEIVAQATERHVAVKQCERRQLDKMVGD 62 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV +K ++ ++ Q ++Q+ + L L+ ++PHN G ++RS A G +GV+ Sbjct: 63 VRHQGVVAQVKAQDFVSLAQLLAQSSQSERFFLILDGITDPHNFGALIRSAAAAGCQGVI 122 Query: 228 V-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 +D + +G +TA G +VQ N+ +++ ++AG V + E+G+ LF+ Sbjct: 123 FAKDRSCPVTGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEGQSLFEA 182 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L A + LV G E G+ R D + I G V LN+SVATG+ L E R + Sbjct: 183 PLSAPIALVAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVRNH 239 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 6/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 ++ET+++G N QAL +S + W ++ R +E + A + + Sbjct: 2 SDETKIHGVNPVQALLESG-RPVSSLWVLKGRHGKRVEEMIEGFRARGVPIQFCERTAMD 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + + H GV R + + + Q ++ L+ +PHNLG +MRS F Sbjct: 61 RMADGGAHQGVIARCAPREAMSWDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEAF 120 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G V++ D + AI+ + G AE + I N+ ++ +Q V+ + E G Sbjct: 121 GALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEAG 180 Query: 281 KPL-FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 PL + LV+G E GL R+ D I G V LN+SVATGV L E Sbjct: 181 APLIGTLDCKGPLALVMGNEGSGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYEV 240 Query: 340 WRQN 343 RQ Sbjct: 241 LRQR 244 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 8/240 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELTKA 165 +YG+N + + ++R + +F S T R KE + +A +Y L K Sbjct: 1 MYIYGKNILKEIIEAR-YPVKHIFFSSSKTERGSLKEIVEDVANLGYSYSFSPNEVLEKM 59 Query: 166 SGTEHHGGVCFLI-KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 + T H G+ I + + + + ++ L+ +PHN G ++R+ GV Sbjct: 60 ALTNKHQGIVIDIGNDFKYENLD--IIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVD 117 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +++ D A+ + I+ + G + I N+ N ++ ++ V E KP Sbjct: 118 AIIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEG-KPY 176 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++ K+ LV G E G+ ++ D V I NV LN+SV++G++L E +Q Sbjct: 177 YEIDWQGKICLVFGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 99/244 (40%), Gaps = 7/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELT 163 + V G+NA +S + + W ++ V + ++ + V +L Sbjct: 3 QQHDYVIGKNAVIETLKSD-RKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLD 61 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 + T H GV + + + Q L L+ +PHNLG +MR+ Sbjct: 62 QMV-TGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADA 120 Query: 221 FGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G G+V+ + + + + G EH+ N+ L++ ++ G VV T + Sbjct: 121 VGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASA 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + + LV+G E +G+ ++ D +K+ G V LN SVA G+L+ E Sbjct: 181 REDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEV 240 Query: 340 WRQN 343 +R+ Sbjct: 241 YRKR 244 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 3/238 (1%) Query: 109 RVYGENACQALFQSRPEAIVRAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++G +A + + P++I + R ++ + + ++ L K +G Sbjct: 6 YIFGFHAITSRLRQHPDSIKEIYLDTNRHDQRARDLMSLAETTSTRLILCEQDRLCKMTG 65 Query: 168 TEHHGGVCFLI-KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 T H GV + K R T++ + +L L+ +PHNLG +R FGV V Sbjct: 66 TTRHQGVAAHVTKLRRYATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFGVHAV 125 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 VV D A+ S + A G + V N+ L + ++ G +V T+++ L Sbjct: 126 VVPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPDTLDS 185 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +L + VLG E G+ R+ DL V I +G++ LN+SV+ G+ L E +RQ+ Sbjct: 186 VTLTRPLAWVLGAEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFRQH 243 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 46/241 (19%), Positives = 95/241 (39%), Gaps = 6/241 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 + G N +S I + + + + ++ + + L K + + Sbjct: 4 IEGRNPVIEAIKSG-RTIKKIFIQEGVRGKKVDRIIKEASRFNIPLQKAKKDFLDKKARS 62 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H G+ + + ++ V + G ++ L+ +PHNLG ++R+ G G Sbjct: 63 HSHQGIIAMADDIKYVSPREMVEIAREKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHG 122 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 ++ + + + + G H+ NI + D + G + T +P + Sbjct: 123 LIYPRKRSADITPVVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRGTRPYY 182 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 + LV+G E +G+ ++ D V I +G + LN SVA GV++ E RQ + Sbjct: 183 SADYKGPVGLVIGNEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQRR 242 Query: 345 A 345 + Sbjct: 243 S 243 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 3/253 (1%) Query: 94 FIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRK 152 D + E VYG NA L QS+PE++ + + + + P+ KE + + Sbjct: 3 RTDHAEIPAPEPREQVVYGRNAVIELLQSKPESVEKIYLQFNTSHPKLKEIVITARRLKI 62 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ-DCVLALENESNPHNL 211 +LT SGT + GVC L+ T+ + ++ ++ L+ +PHN+ Sbjct: 63 PCGKARMEKLTLISGTAKNQGVCALLTSVTFYTLDEVLAAPRNSSPLLVILQGLEDPHNV 122 Query: 212 GGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++R+ V+ ++ S + + G H++ ++V LD + G+ Sbjct: 123 GAIIRTAEAVAADSVIMIEGKGAPISATVHKASAGALSHMRVCKVKSLVKTLDLLHERGF 182 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 ++V E VLV+G E +GL R D V+I G V LN+SV Sbjct: 183 SIVAADMEAEHNHTDIDWKRPTVLVMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSV 242 Query: 331 ATGVLLGEWWRQN 343 A GV+L E RQ Sbjct: 243 AAGVMLYEAMRQR 255 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 21/295 (7%) Query: 67 SPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR---QRAEETRVYGENACQALFQSR 123 + PG G+ K E +R + E + V+G + L + R Sbjct: 2 ARRGAAGALPGSGPLRPRLKPGMKKKVVSRKESGQRWPADQPEASLVWGIHPVTELLRRR 61 Query: 124 PEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRN 182 P + + + R + A++R +D A L A+ H GV + + Sbjct: 62 PGLVRKLYLAGGRDDGRVAAIVELAASHRIP---LDRAGLPPAAAELPHQGVAARVAPPS 118 Query: 183 GTTVQQWVSQ-------------AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 ++ + + + AG +L L++ +PHNLG ++RS A FGV GV++ Sbjct: 119 PLSLAELLQRLPALGPAPASSPAAGPPPLLLVLDSLQDPHNLGAVLRSAAAFGVDGVILP 178 Query: 230 -DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 D + SG ++ A G A + N+ L ++ G+ + S E L++T Sbjct: 179 KDRSAPLSGTVLKAAAGTAALLDICRTTNLAGALGTLKKHGFWIYGASGEASGNLYETDF 238 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 LVLG E +G+ + D + I V LN+SVA G++L E R+ Sbjct: 239 TGPTCLVLGNEQKGIRPLLKKHCDFLLAIPLAAGVESLNVSVAAGIMLAEIRRRQ 293 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 108/277 (38%), Gaps = 8/277 (2%) Query: 70 RTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVR 129 + + E D + F RR+ E + G N+ ++ + + Sbjct: 10 KKERKCDPHEKRRSGDQSIRGERGFSSG--GRRKEEETCFIGGRNSVLESLRAG--QVKK 65 Query: 130 AWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQ 188 + R A +E L + + H GV +K +++ Sbjct: 66 VFIKSGKKDGRLLALAEEAERLGVAAIETEERTLDRLTEGVRHQGVAASLKPYAYADLEE 125 Query: 189 WVSQ-AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGG 246 +S ++ L+ + N+G ++R+ G V++ + + AA++TA G Sbjct: 126 VLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPVTAAAMKTASGA 185 Query: 247 AEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA 306 ++ NI L+ ++ G+ V + G L++ L +V+V+G E +G+ Sbjct: 186 FAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGG-DLYQADLKGPLVIVMGAEGKGISPL 244 Query: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + D V+I G V+ LN+SVA +L+ E RQ Sbjct: 245 TKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQR 281 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 6/244 (2%) Query: 105 AEETRVYGENACQALFQ-SRPEAIVRAWFIQSVTPRFK-EALRWMAANRKAYHVVDEAEL 162 V+G +A + E I + + + V F E R+ V + +L Sbjct: 10 TNNDFVFGRHAGIDFLKTQDSEKINKVFLAEGVQEDFAREVYRYAKKKHLIIQRVPKNKL 69 Query: 163 TKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA--QDCVLALENESNPHNLGGMMRSCAH 220 K +G E+H G+ + Q + + +L L+N +PHNLG ++RS Sbjct: 70 DKLTGGENHQGLVLAVASFEYADFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADA 129 Query: 221 FGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV GV++ + +T+ G +HV +N+V + GY + T+ E Sbjct: 130 TGVSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAMEG 189 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K + K VLV+G E +G+ D + I G+V LN SVATGVLL + Sbjct: 190 D-DYRKWNANGKTVLVIGNEGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQA 248 Query: 340 WRQN 343 + Sbjct: 249 FNSR 252 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 46/278 (16%), Positives = 102/278 (36%), Gaps = 22/278 (7%) Query: 82 EKADHGGISGKSFIDPEVLR-RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF 140 + E R++ + V G + ++ +S+ Sbjct: 4 ISSKDNKRIKYIRSLLEKGNIRKKNHQFVVEGIKLVDEALEYGK--VLEVVCAESLYNEL 61 Query: 141 --------------KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTV 186 + + + VV + S T+ G+ + + + + Sbjct: 62 ISGDLSGNRLLAENDKNITNYVKKGSSLLVVSDTVFKSMSETKTPQGILAVAEMPDYRLL 121 Query: 187 QQ-WVSQAGAQD---CVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIR 241 + ++ QA ++ +L LE+ ++P NLG +MR+ GV GV++ + + + +R Sbjct: 122 DKGFLEQAYTKNGKIKLLVLEDTADPGNLGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVR 181 Query: 242 TAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYE 301 + G + +++ + + +++G + T + K + +++G E Sbjct: 182 STMGSIFRLPFTYVEDLKETIKELKKSGISFYATHLKGEKSYKDIKYSGRSAIIVGNEAR 241 Query: 302 GLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 GL D D D V I G V LN +VA +++ E Sbjct: 242 GLSDEVADLADTYVLIPMQGKVESLNAAVAAALMMYEV 279 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 7/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTK 164 E+ + G +A + S AI + + + + L+ + + V +++L Sbjct: 2 EDIVIVGRHAVKEAIISG-HAINKILIQDGIKKQQINDILKNAKSQKLIVQTVPKSKLDF 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHF 221 + H GV L+ +++ + + V+ L+ +PHNLG ++R+ Sbjct: 61 LA-NAPHQGVAALVAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADAS 119 Query: 222 GVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV V++ ++ + + + G +HV I N+ +D+ + G+ + T + Sbjct: 120 GVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEANNA 179 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + +V+G E +G+ D D +KI G+V LN SVA +++ E + Sbjct: 180 TDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEVY 239 Query: 341 RQN 343 R+ Sbjct: 240 RKR 242 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 5/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELT 163 RV+G +A +A P+ IV+AW R + + D L Sbjct: 2 TGVRRVWGIHAAEAALDYSPDKIVKAWLDDHRMQNRLQAVATRLDELGVEIVRADRKRLD 61 Query: 164 KASGTEHHGGVCFLIKKRNG---TTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAH 220 + + H G+ + + + A L L++ +PHNLG +R+C Sbjct: 62 RLADPRKHQGILLELDLPGEQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDA 121 Query: 221 FGVKG-VVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GVKG VV +D ++ + + A G AE V N+ LD F+Q GY VV + E Sbjct: 122 AGVKGLVVTKDQSVGLTPTVAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGAAGEA 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + L++ L +V+V+G E GL R+ D ++I G V LN+SVATG++L E Sbjct: 182 ERTLYELDLRLPLVVVMGAEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEV 241 Query: 340 WRQN 343 RQ Sbjct: 242 MRQR 245 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 12/275 (4%) Query: 81 PEKADHGGISGKSFID--PEVLRRQRAE----ETRVYGENACQALFQSRPEAIVRAWFIQ 134 E++ GG G+ + P+ R VYG N A ++RP+ + R + ++ Sbjct: 2 RERSSKGGRGGERASEEVPQRASRGERGGGEASRFVYGVNPVLAALRARPDEVERLFLVE 61 Query: 135 S--VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ 192 E L V L + H GV ++ ++ + Sbjct: 62 GQLGARAAGELLSRAREFGIRVEKVTRERLGTLAEGGVHQGVVVELRGFKYAELEDLLEA 121 Query: 193 A---GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAE 248 A G V+ L+ +PHNLG ++RS G GVV+ +D A+ +G + + G E Sbjct: 122 AKALGQPPLVVVLDGIQDPHNLGAIIRSADALGAHGVVIAKDRAVQVTGTVAKASAGAVE 181 Query: 249 HVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAAR 308 H + NI L++ ++AG V + +P++ L + LV+G E G+ D Sbjct: 182 HSRIARVVNISRALEELKEAGLWVAAADVDAKEPMWSARLDGPLALVVGAEGAGVRDGVL 241 Query: 309 DPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 D R++I G V LN SV+ G+LL E RQ Sbjct: 242 KHCDFRLRIPMAGQVGSLNASVSAGILLYEVARQR 276 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 102/265 (38%), Gaps = 4/265 (1%) Query: 78 DETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT 137 ++ ++ I R + + V G + + + + + + Sbjct: 2 EKNMITSETNSIIKYVKSLQLKKNRMKHMQFTVEGLRIVEECVKHNGDIAYIIYSEEIYS 61 Query: 138 PRFKE-ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ 196 + E L +A + V +K S TE+ G+ ++ +N ++++ SQ G + Sbjct: 62 TQGAEKLLDKIALAGYTLYEVSSQLFSKISTTENPQGIMAVVHMKN-RSLEEIKSQKGKE 120 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITG 255 + L+ +P N+G ++R+ V++ + + +R G H+ I Sbjct: 121 LFFVILDRIQDPGNMGTIIRTAESANADAVIITKGSVDPYNSKTLRATMGAIFHMPIIQC 180 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 D+ LDD ++ ++ + K + +++G E G+ +A D RV Sbjct: 181 DD-DRWLDDLKENEVKLIAADLDTDKTYIDIDYNTSIGIIIGNEANGISEALLSKVDQRV 239 Query: 316 KIDGTGNVAGLNISVATGVLLGEWW 340 I G + LN SVA +L+ + Sbjct: 240 IIPILGKIESLNASVAASILIYKAA 264 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 6/241 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQ-SVTPRFKEALRWMAANRKAYHVVDEAELTK 164 E V+G N + + I + + R + L + +LT+ Sbjct: 2 REELVFGVNPVREALR-GKREIFGLYVQSTATDHRLDKILELARERGVRVIRREREDLTR 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 G+ HH G+ + + + + + A +L L+ +PHNLG ++R+ A Sbjct: 61 MCGSSHHQGMALKVAPFSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAACA 120 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G GVV+ D A + AA + + G E + NI L+ +++GY V S E Sbjct: 121 GASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEAD 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 L++ + K+ LV+G E EG+ R D V I G V LN SVA G+ L E Sbjct: 181 ASLYEVAFSGKIALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVA 240 Query: 341 R 341 R Sbjct: 241 R 241 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 105/268 (39%), Gaps = 18/268 (6%) Query: 85 DHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV------TP 138 + + + ++ + R+ + V G + + +++ + +S Sbjct: 12 SNPKVKMLNKLNKDSRLRRERDVFIVEGIRMFREI---PVDSVDEIYMSESAYAEYCDED 68 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 +E V+ ++ S T+ G +++ + ++ + Sbjct: 69 DLQELYNAAE-----VTVMSDSVFAGVSQTKTPQGCMAVVRCFHYEMTD--IAGSTDTAT 121 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDN 257 L L+ +P N+G + RS G+ GV++ + + +R+ G V + D+ Sbjct: 122 YLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDD 181 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 ++ +D ++ G + + + L+ T P K+ ++G E GL A D D ++I Sbjct: 182 LIYTIDALKRKGVLIYGAHLDGEE-LYDTEFPDKIAFLIGNEGNGLSKAVSDTADRLLRI 240 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQNKA 345 G V LN +++ +L E RQ ++ Sbjct: 241 PMEGKVESLNAAISATLLSYEAMRQRRS 268 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 1/236 (0%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 +YG +A A + + + R ++ A R L + T+ Sbjct: 6 LYGIHAVSAALDAEELLELWVAVERRADERIAPLVQKAAEQRLPVQEWRSVALGRKLNTD 65 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 H GV L++ G + ++Q +L L+ +PHNLG +RS GV V++ Sbjct: 66 RHQGVGGLLRAFPGQDFEAILAQLNGCGFLLVLDGVLDPHNLGACLRSAEAAGVDAVILP 125 Query: 230 -DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 D A + + + G A V T N+ L ++AG+ +V + E + L+ L Sbjct: 126 RDNACPVNATVRKASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMAGEGSRSLYALDL 185 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 +V+V+G E +GL R+ D I G + LN+SVATG+ L E RQ + Sbjct: 186 DMPLVMVMGGEEKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEAARQRR 241 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 5/249 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDE 159 ++ +YG + A + + + R ++AL+ + + + Sbjct: 2 KRPDRSETLYGIHPVMAAITAGRRKVDTLFIASGRETRQPHQQALQAAEQHNIPVNEIPA 61 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRS 217 +L + +G + H G+ + + ++ + +L + ++PHNLG + R+ Sbjct: 62 RDLEQMTGGKVHQGIAARVSVYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALART 121 Query: 218 CAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 GV G+++ D A + AA++ + G E + NI VLD + AG + Sbjct: 122 ALCAGVHGLIIPKDNAASPTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLD 181 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + ++ + L + LV+G E G+ D + I T V LN SVA V + Sbjct: 182 GRGEQTIYDSDLTGPLALVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAM 241 Query: 337 GEWWRQNKA 345 E +RQ +A Sbjct: 242 YEAFRQRRA 250 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 52/238 (21%), Positives = 101/238 (42%), Gaps = 6/238 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 VYG+N +AL + + + + E + + + V ++ Sbjct: 4 YVYGKNVVKALL-ADKKKVYEIILSDGFRDK--ELEQEIRKRKIPCKVNSRKKMDTMFSG 60 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 +H G+ I T+++ V+ G + L+ +PHNLG ++R+C GV GV Sbjct: 61 SNHQGIAAKIDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVGVDGV 120 Query: 227 VV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ + + + + + G + V+ N+ L ++ G+ V + + + Sbjct: 121 IIGKHRGVKLTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADFDNSQDYRQ 180 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 S +VLV+G E G+ + D V++ G+V+ LN SVA VLL + + Q Sbjct: 181 ASYDMPLVLVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYAQR 238 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 92/257 (35%), Gaps = 17/257 (6%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 R + + G + Q +S I ++ E Sbjct: 6 KNEKVKSWKKLHRRKERLKTNTFLIDGIHLIQEALKSN-WVIQELIVVEGY-----ELPN 59 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 V E L + S T+ GV +++ + ++ L+ Sbjct: 60 DAKD--VPVAYVSENVLKEISQTQTPQGVIAVVEM-------NIPKVQEDNNLIILLDAI 110 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N+G ++R+ GV VV+ D + + IR +G H+ T + + Sbjct: 111 QDPGNMGTIIRTADAAGVDAVVLGDGCVDIFNDKVIRATQGSIFHIPIYTAT-LEQEIHM 169 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 + G+T++ T+ + S+ K+ L+LG E G+ + + + R+ I G Sbjct: 170 LQTQGFTILATALHDAVEYTEVSVHNKVGLILGNEGAGIAPSLLNKANQRINIPIYGKAE 229 Query: 325 GLNISVATGVLLGEWWR 341 LN+ +A G+L+ + Sbjct: 230 SLNVGIAAGILMYHLKK 246 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 273 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 6/243 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 + +V G NA + ++ + + + ++ ++ + + + +L Sbjct: 2 SNYEKVIGRNAVRETLKAG-RNVNKLYISENHDSGLVSIIKMAKSKGISIQKTNNHKLDS 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHF 221 SG+ HH GV L ++++ + + + V+ L+N ++PHN G ++RS Sbjct: 61 MSGSTHHQGVLALCSPVETISLRELIEKMNEKVTKPLVVILDNITDPHNAGAIIRSAYCA 120 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G GV++ + +++ G EH+ NI +D ++ G VV Sbjct: 121 GADGVIMQTRRSASIGEGMYKSSAGAIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDMNGE 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + LV+G E +GL ++ D I + LN SVA G++L E Sbjct: 181 -NYYDMDYDMPLALVVGAEGKGLGRLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFEAV 239 Query: 341 RQN 343 + Sbjct: 240 KTR 242 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 5/241 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKAS 166 +YG N + S E + R + + E + + + L + Sbjct: 2 EVIYGVNPLREALISGGEGVTRIVVARGRSESSISEIRTLAKQRGIPVEIRERSFLDDLA 61 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAHFGV 223 G H GV + + ++ D VL L+ +PHNLG ++RS FG Sbjct: 62 GHASHQGVLGVCTAYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGA 121 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+++ + A +G I+T+ G A H+ N+ LD+ + G+ + + + Sbjct: 122 NGIILPERRAASVTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARADQS 181 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + + LV+G E +GL R D + I G + LN+SV+ G++L E R+ Sbjct: 182 VSDPDYQGAVGLVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRK 241 Query: 343 N 343 N Sbjct: 242 N 242 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 7/236 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 VYG N + + S + +F S + + + + Y + + L K G Sbjct: 1 MIVYGRNVLKEILTSN-HPVKLIYFSDSHDKELDKLIEQVKERKLPYTIAPKNVLKKLCG 59 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 E + GV I ++ L+ +P NLG ++R+ GV VV Sbjct: 60 EEKNQGVVIDIGDFQYADESYL----PENPFIVLLDQVQDPQNLGAIVRTAVAAGVNMVV 115 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + D + + +I+ + G + + N+ ++ + G + KPL++ Sbjct: 116 LTKDNSAHVTPGSIKASAGTIFRIPIVITVNLARYIEKLKDKGVWIYGADMRG-KPLWEV 174 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 L + +V G E G+ ++ D V I + LN+SV+ G+L+ E R+ Sbjct: 175 KLERPLGIVFGNEGSGIRQLVKESCDELVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 8/240 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 + G +S AI + + +E L ++ L + Sbjct: 11 DLLAGRQPVMEALKSG-RAINKLVVAKGAREGSIREILGMARDRGIPITELERTVLDR-- 67 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGV 223 HH G+ + V++ + +A G VL L+ +PHN+G ++R+ G Sbjct: 68 EVRHHQGIIAHVAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGA 127 Query: 224 KGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 GV++ + + + G E+V N+V + ++AG ++ ++ + +P Sbjct: 128 HGVIIPKRRGGAITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPRP 187 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 F+ + L++G E +G+ R+ D V I G V LN SVA +L+ E RQ Sbjct: 188 YFRQDFRGPVGLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 8/235 (3%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 +YG S I +A+ I+ + +E + + + VD+ K Sbjct: 9 IYGRKPVIDAIDSG-VKIYKAFVIKQNSKIVEEIIAKLNKANVEINFVDKRFFDKI--EL 65 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 +H GV + ++ ++ L+ +PHNLG ++RS FG GV++ Sbjct: 66 NHQGVMVEAESFEYKDLRDLDKYQR----LIILDQIEDPHNLGAIIRSAESFGFDGVIIP 121 Query: 230 DA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 + + S +T+ G ++ I N +++ ++AG+ V + E P+ + L Sbjct: 122 ERRSASVSPIVYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEASSPIDQVDL 181 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 K+ L++G E +GL R+ D+ + I G V LN SVA+ + + E RQN Sbjct: 182 KGKVCLIVGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQN 236 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 57/255 (22%), Positives = 98/255 (38%), Gaps = 11/255 (4%) Query: 96 DPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR---FKEALRWMAANRK 152 + R G NA L + P + + V R + R Sbjct: 3 NSNPKRDLEEGLVL--GRNAVIELLK-GPREVECIYICDDVPARGQPISRIVALAKEARV 59 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPH 209 VD L + +H GV + TV++ ++A G ++ ++ +PH Sbjct: 60 PVKRVDVRRLDTLANGLNHQGVAAQAAAFHYCTVEELFARAAARGEPPLLVIADSIEDPH 119 Query: 210 NLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA 268 NLG ++R+ G G+++ + RT+ G EH+ N+V+ + + + Sbjct: 120 NLGAIIRTAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVARVTNLVSTIKELKAR 179 Query: 269 GYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 G + + + +T L LV+G E GL R+ D + + G V LN Sbjct: 180 GVWIYGADASGAR-WDQTDLTGPSALVIGSEGFGLSRLVRETCDALLSLPMRGEVNSLNA 238 Query: 329 SVATGVLLGEWWRQN 343 SVA G+L+ E RQ Sbjct: 239 SVAAGILMYEAVRQR 253 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 49/260 (18%), Positives = 95/260 (36%), Gaps = 16/260 (6%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQS-VTP 138 + R +A + G + + ++ I + V P Sbjct: 32 KRIDSVKNEQVKGWKKLHTKKGRDKAGRFLIEGFHLVEEALKA-KFHIEVILMTEQTVLP 90 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 E +V L + S TE G+ + ++ Q Sbjct: 91 LTWEVYEN------DIIIVSPQVLKEISETETPQGIAAVCAIPAPPSMTTLSGQ------ 138 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDN 257 L ++ +P N+G M+R+ G+ GVV+ + + L + IR ++G H+ I + Sbjct: 139 FLLIDRVQDPGNIGTMIRTADAAGMTGVVLGEGSVDLFNSKVIRASQGSIFHMPVIR-GS 197 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 ++ ++ ++ V TS + + L++G E EG+ + +D + I Sbjct: 198 LIEWVEKLKEKNIPVFGTSLTEASSYTAIEPQPEFALIVGNEGEGVQSELLEGSDQNIYI 257 Query: 318 DGTGNVAGLNISVATGVLLG 337 G LN++VATG+LL Sbjct: 258 PIYGQAESLNVAVATGILLY 277 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 57/250 (22%), Positives = 94/250 (37%), Gaps = 6/250 (2%) Query: 96 DPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYH 155 + V G +A A +S + + W + + + + Sbjct: 9 ARRRSAQGEEAADLVKGRHAVLAALESE-RPVNKVWVAEGASG-MDAIVAKARSRGVVVQ 66 Query: 156 VVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLGGM 214 V + L + + H GV + + + + G V+ L+ ++PHN G + Sbjct: 67 FVPRSRLDEMAS--AHQGVIAQVAPYAYVDLDDVIRRDTGFAPLVVVLDEIADPHNFGAI 124 Query: 215 MRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ G +GVV+ + + A G E + N+ L +QAGY +V Sbjct: 125 LRTAEASGAQGVVIGKRRQAQVTDVVAKAAAGALETLPVARVANVAQALQRLKQAGYWIV 184 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 E P + +V+G E +G+ R+ D V I G V LN SVA G Sbjct: 185 GADVEAKVPYTEVDYRGPTAVVIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNASVAAG 244 Query: 334 VLLGEWWRQN 343 VLL E RQ Sbjct: 245 VLLYEAVRQR 254 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 5/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFI-QSVTPRFKEALRWMAANRKAYHVVDEAELT 163 ++ + +A QA +S P ++ + + + R + + +L Sbjct: 2 SKSIIITSFHAVQAQLKSNPTCFIKVFILNKRCDKRLNTLTSEFNNFGISVQRCTKIQLD 61 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 K S + H GV I + +S + +L L++ +P NLG +RS Sbjct: 62 KLSNHQTHQGVAAEILLPTLPDQGELISYVSKLDNAGFILILDSIQDPRNLGACLRSANA 121 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV VV+ ++ + + +T+ G ++ N+ + +Q V+ Sbjct: 122 AGVHCVVINKNGSAPINSLVHKTSAGALNQLKIFQVTNLSRTIKALQQKNIWVIGLDGSV 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +++ L +++G E GL + D KI G V LN+SVATGV L E Sbjct: 182 NISIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQLAKIPMQGKVESLNVSVATGVTLFEV 241 Query: 340 WRQN 343 RQ Sbjct: 242 NRQR 245 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 98/260 (37%), Gaps = 8/260 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + + R R + G + Q F+S + + P E + Sbjct: 10 QNERVKQWASLLDKKYRDRTGLFIIEGVHLVQEAFKSSAAVQCVVYNSERGIPH--ELEQ 67 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + + K +GT+ V +++K + V+ L+ Sbjct: 68 LAREGGAEWVQATTQVMAKCTGTDTPPPVFAVLEKLKRDDTALF----RNNSLVVVLDGV 123 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N+G ++RS G VV+ + L + +R+ G H+ I ++ +L + Sbjct: 124 RDPGNVGTIIRSADAVGADAVVLGKGSVDLYNPKTVRSTMGSLFHLPIIEA-DLAELLPE 182 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 + G +V TS + + A L++G E EGL DA R D V I G Sbjct: 183 AQSKGIKLVGTSLQATHTCYTYDWTAGTWLLMGNESEGLSDAVRLAVDESVIIPMQGEAE 242 Query: 325 GLNISVATGVLLGEWWRQNK 344 LN+++A VLL E RQ K Sbjct: 243 SLNVAMAATVLLYEAVRQRK 262 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 4/243 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELT 163 E+ + G ++ I R + + + L +D+A L Sbjct: 2 EEKRMIEGRRPVMEALRAG-TKITRILLQKGSRGKPVDDILALAKEYSVKVEYLDKAALD 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAG-AQDCVLALENESNPHNLGGMMRSCAHFG 222 K + + +H GV T +++AG ++ L++ +PHNLG ++R+ G Sbjct: 61 KRATSRNHQGVMAETPPFRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALIRTAYAAG 120 Query: 223 VKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 G+++ + A + AA+RTA G AE++ N+ LD+ + AG V + Sbjct: 121 CDGIIIPERRAAQMTPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDGES 180 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 VLV+G E EGL ++ D V++ G VA LN SVA +L+ E +R Sbjct: 181 VYTTGDYQGGTVLVIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEVYR 240 Query: 342 QNK 344 Q + Sbjct: 241 QRE 243 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 99/266 (37%), Gaps = 12/266 (4%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 + + + R++ +E V G + + +V+ + + E Sbjct: 19 STSSSQVKHVISLLSKARERKKNKEYVVEGVRMVSEV---PADLLVKIYMSERFHSNNPE 75 Query: 143 AL-RWMAANRKA---YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 + + + +V + + S T+ G+ +++ ++ +++ ++ Sbjct: 76 YVHELVKKQGISSDSIEIVADNVFDRMSQTQTPQGIMAVVRMKD-SSISDMLT---DNPL 131 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDN 257 ++ +EN +P NLG ++R GV GV++ + + + IR+ G V + + Sbjct: 132 LILVENLQDPGNLGTILRMGEGAGVTGVIMSSNTVDIYNPKTIRSTMGSIFRVPFVYVQD 191 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + + + AG V + ++G E GL + D ++I Sbjct: 192 FSDAVSQCKNAGIKVYAAHLDGKNTYLGEDYREGTAFLIGNEGNGLTEDITKQADTLIRI 251 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQN 343 G V LN ++A +L E RQ Sbjct: 252 PMQGEVESLNAAIACTILTYEAVRQR 277 >UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desulfitobacterium hafniense RepID=B8FZK3_DESHD Length = 271 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 97/262 (37%), Gaps = 6/262 (2%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + R+ E + G + + + + + Sbjct: 6 QNEQVKYVVNLHKRKFREENGEFLIEGWRFVEEGLARGAHLTKVFFCSECKNESWPQLAE 65 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGT--TVQQWVSQAGAQ--DCVLA 201 + VDE L K S TE+ G+ ++K+ T + V+ AG +L Sbjct: 66 ALKVKGVPVIEVDERVLRKMSDTENPQGILAVVKQSRWTWDDFIEIVNPAGRSAIPMLLI 125 Query: 202 LENESNPHNLGGMMRSCAHFGVKGV-VVQDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +P N G ++R+ GV V + + L + +R+ G + +T Sbjct: 126 LDGVQDPGNCGTILRTALAAGVTQVCLTEGTVDLYNLKVLRSTMGAIFSLNIVTHCQPEE 185 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 +L R V E L++T M LV+G E G A + P R+ I + Sbjct: 186 ILKVCRSHKIPVFVGDVEG-TDLYETHFAQPMALVVGNEGNGPSAAFQGPGVKRITIPMS 244 Query: 321 GNVAGLNISVATGVLLGEWWRQ 342 V LN+++ATG++L E R+ Sbjct: 245 HQVESLNVAMATGIILYEVRRR 266 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 5/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG ++ + + P + + ++ R + ++ + AN +H+ + L Sbjct: 7 IYGFHSITSQIRLDPLVVKEIFIDEARSDGRVNDLMKIIKANEVKFHLSTKDRLDGMVSG 66 Query: 169 EHHGGVCFLIKK--RNGTTVQQWVSQAGAQDCV-LALENESNPHNLGGMMRSCAHFGVKG 225 H GV L+++ TV+ + + + + L L+ +P NLG R GV Sbjct: 67 NKHQGVVALVREAQNKYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVADAMGVDA 126 Query: 226 VVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 ++ D A+ + + A GGAE V + N+ + + + V T K L Sbjct: 127 LICPKDNAVGLNATVRKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNANKSLQ 186 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 KT+ + LV+G E +G+ + D I G V LN+SVA+G+ L E RQ Sbjct: 187 KTNFKGSIALVMGSEGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 83/265 (31%), Gaps = 4/265 (1%) Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQS-VTPR 139 + E R G + Q+ E + + PR Sbjct: 2 KITSRSNERIKYLKKFHEKKHRDLENGFLAEGLKVIEEALQAGWEVRMLLYTSDVLRHPR 61 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 L A ++ L + T+ G LI K + + Q V Sbjct: 62 GVALLDKARATGTELWECEKQVLAVVTDTKTPQGALALIAKPEHSL--DVLLQGRGTPLV 119 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNI 258 + L+ +P NLG ++R+ ++GV+ ++ L +R + G H+ Sbjct: 120 VVLDGLQDPGNLGTIIRTADACELQGVITLEGTVDLFHPKVVRASAGALFHLPAFGDLPA 179 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 VL+ F AG L++ L +G E G + D V I Sbjct: 180 PAVLEFFTGAGVQKFVADPRGDYSLYECDFSRPTALFMGNEARGCGEMLHAAADRVVAIP 239 Query: 319 GTGNVAGLNISVATGVLLGEWWRQN 343 G LN+ VA + + E RQ Sbjct: 240 MPGQAESLNVGVAASLFIYEAVRQR 264 >UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=A4XKC2_CALS8 Length = 271 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 11/267 (4%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 K+ + + R+ + V G A + E I F Q + +++ Sbjct: 10 IKSKENECVKRLKKLHDKKHREEFKVFLVEGVKAVKEALDYAIEDINLLIFSQEASKKYE 69 Query: 142 EALRWMAA-----NRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ 196 E + K V E S T GV + + Sbjct: 70 EFFSRCISLLNSGKLKRIVQVPEKIFEHISTTTTPQGVLAECSF-----FDKELDVLKKH 124 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITG 255 + V+ +++ +P NLG ++R FG + V+ V + + +R+A G HV + Sbjct: 125 NRVVVIDSVQDPGNLGTIIRCADAFGFECVITVNGTVDVYNPKVVRSAMGSMFHVDVVRE 184 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 VL+ + G+ + T+ + K S+ + +V+G E +G+ A + +V Sbjct: 185 RKKEEVLEALNKRGFALYVTTPYGDVDISKLSVDDRFAIVIGNESKGVDVAFLENATKKV 244 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQ 342 KI G LN +VA ++L E ++ Sbjct: 245 KISMPGKAESLNSAVAAAIVLYELRKK 271 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 269 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 7/236 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG ++ + + + S + + + + L K + Sbjct: 3 YIYGRGPVIEALKNNK--VDKIYLA-SHEGSIIKIKAMAKEKKVLISSLSKDRLDKMAPG 59 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGVKGV 226 ++H GV L+ Q+ + + + +L L+ +PHNLG + RS F G+ Sbjct: 60 KNHQGVVALVSGYEYKDFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSALFFNFDGI 119 Query: 227 VVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ L + +T++G ++V N+ ++ ++AG+ + E + Sbjct: 120 IIPKHREALVNDTVYKTSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLEGD-NIKD 178 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 K+ +++G E +G+ D +D +VKI LN SVA G+++ E R Sbjct: 179 VDFSGKVAIIIGNEGKGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYEVIR 234 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 103/237 (43%), Gaps = 5/237 (2%) Query: 107 ETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTK 164 E ++YG+NA +S + + + + + +F E L V+ + + K Sbjct: 2 EDKIYGKNAVLEALKSN-IPLNKIYIAKGIHFDNKFNEILNLAKEKGVPIKYVERSVIEK 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 G + GV +I + + ++ L++ +PHNLG + R+ G Sbjct: 61 MVGG-NSQGVLAIISSVPYREWEDIEKTLNNKSVIVVLDHIQDPHNLGAIARTSEFAGAS 119 Query: 225 GVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +V+ + + A+ + + G ++ + NI N L + ++ G+ +V + Sbjct: 120 AIVIPKARSAGVTSASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTENLY 179 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + + LV+G E EGL ++ DL VKI G V LN+SVA G++L + Sbjct: 180 NQVNYRFPLALVVGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIILYKIR 236 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 99/263 (37%), Gaps = 15/263 (5%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 K+ I + R + V G+ + ++ I + + + Sbjct: 3 IKSVQNQIFKDALSLQNKKLRDKNGLFFVEGKKQIYEIPKN--RTIKQIFISEKYKNDVT 60 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 K ++ +K S T+ G+ +++K+ V+ + +G + Sbjct: 61 NL--------KNVIMLSNHLFSKLSATKSPQGIMAIVEKK-YYAVEDIIKNSG---LFIL 108 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVN 260 LEN +P NLG ++RS FG K V V A + S IR G H+ I NI N Sbjct: 109 LENIQDPGNLGTIIRSADAFGAKAVFVSKGSADIYSDKTIRATMGSIFHLPIIDSINIKN 168 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 L+ + +V S + K L P K V+G E GL + D VKI Sbjct: 169 TLNLMKNKKISVFAASLKGEKYLNDIKFPNKSAFVIGNEANGLRSETENSADTLVKIYMP 228 Query: 321 GNVAGLNISVATGVLLGEWWRQN 343 GN LN + A +++ E + Sbjct: 229 GNTESLNAATAASIIMYEAAKNR 251 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 7/241 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTK 164 ++ + G NA +S I + F + + R K + V + +L Sbjct: 30 DKEVIAGRNAILEAIKSG-REINKILFQEGIEKGRLKSIFAIANEKKIICQEVPKRKLDN 88 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 S TE H GV + + + + V+ + +L L++ +PHNLG ++R+ G Sbjct: 89 -STTERHQGVIAYVAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASG 147 Query: 223 VKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQG 280 VK +++ A + S A++ + G EH+ I N+ + + ++ G+ + T+ E+ Sbjct: 148 VKAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERS 207 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + K + + +V+G E EG+ + D + G + LN SVA G+++ E Sbjct: 208 EDYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERI 267 Query: 341 R 341 + Sbjct: 268 K 268 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 100/264 (37%), Gaps = 18/264 (6%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 T + + RQ + V GE+ ++ +V+ +S +P+ Sbjct: 2 TKITSTKSETIKRLKRLMTKKGRQETGQFLVEGEHLVDEAIRAG--RLVQLIMAESYSPK 59 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 L M + + S TE GV ++K V Sbjct: 60 GTWRLEDM-----PVLELSDHVADLLSETEKTQGVFAVVKMTPV---------ERKMKKV 105 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNI 258 L L+ +P NLG M+R+ G V++ + + +R +G HV + ++ Sbjct: 106 LVLDRVQDPGNLGTMIRTADAAGFDTVLLGKGTVDPFNAKVVRATQGSLFHVNVTSV-DL 164 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + L + ++ G+ V T+ + + + K+ LV+G E +G+ D RV I Sbjct: 165 LEKLPELKEDGFHVYGTALSKATSYEQVAFEEKVALVIGNEAQGVHADVLALCDTRVHIP 224 Query: 319 GTGNVAGLNISVATGVLLGEWWRQ 342 G+V LN +VA G+L+ Q Sbjct: 225 VLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 102/245 (41%), Gaps = 6/245 (2%) Query: 104 RAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELT 163 + + +YG N F+ +A+ + ++ + KE LR + +V+E + Sbjct: 4 KDKLMYIYGVNPVLESFK-ISDALKEIYISKNRISKLKEILRLAEEKSISVKIVEETFIE 62 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 K + H GV IK + T+ + + + L L+ +P N G + R Sbjct: 63 KITQGV-HQGVVAKIKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADA 121 Query: 221 FGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV ++ + ++ + + + G HV + +NI + ++ T+ ++ Sbjct: 122 AGVHAIIYQKKRSVGIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQA 181 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +++ + L++G E +G+ D +KI G + LN+SVA+ ++ E Sbjct: 182 KDVFWESDFTQPLGLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEV 241 Query: 340 WRQNK 344 RQ K Sbjct: 242 LRQRK 246 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 9/240 (3%) Query: 112 GENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G +A + + ++I + PR E + + + V + L + + Sbjct: 6 GIHAVKHALDAG-DSIDELLIEKGKHHPRLNELIHLAKKHSIRFSFVPKEALARLAEGVP 64 Query: 171 HGGVCFL---IKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H GV + T + W+ VL L+ ++PHNLG +R+ G Sbjct: 65 HQGVVAKMVAAGAQAVPTFEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAEAAGCAA 124 Query: 226 VVV--QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V+V AA + S + A G + + N+ ++ +Q G+ V + E + Sbjct: 125 VIVLKDHAADVHSPVVAKAACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLAGEAELSI 184 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L +V+G E +G+ R+ D + I G V LN+SVATGV L E RQ Sbjct: 185 YDAKLSGATAVVMGSEDKGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALFEINRQR 244 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 100/246 (40%), Gaps = 7/246 (2%) Query: 103 QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAE 161 Q E+ + G N + +S I + + + K+ L + V + + Sbjct: 3 QENEQEWIGGRNPVLEVLRSD-RDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQK 61 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSC 218 + K H GV + + + A A+ + L+ +PHNLG +MR+ Sbjct: 62 IEKVVSGA-HQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTA 120 Query: 219 AHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 G G+++ ++ + + + G E+V + N+V +++ ++ G + T + Sbjct: 121 DSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDA 180 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + + +V+G E G+ R+ D V + G V LN SVA +LL Sbjct: 181 KGSSDYRTMDVDMPLAIVIGSEGFGMSCLVREKCDFLVHLPMRGKVTSLNASVAASLLLY 240 Query: 338 EWWRQN 343 E +R+ Sbjct: 241 EVYRKR 246 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 53/243 (21%), Positives = 96/243 (39%), Gaps = 7/243 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKA-S 166 + G +A ++ I R V E + V ++L S Sbjct: 27 ILAGRHAIIEAIKAG-RGINRILLADGVRGSGVNELRDLAREHGIMVDTVGRSKLDALVS 85 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGV 223 H G + V++ ++ A G +L L+ +P NLG ++R+ GV Sbjct: 86 QDVRHQGAVAYVAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGV 145 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+++ ++ + R + G E+V NI + ++ G+ + + Sbjct: 146 HGILLPRRHSVPLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEI 205 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + +L +VLV+G E G+ RD D V++ G + LN SVA +L+ E RQ Sbjct: 206 YDRANLTGALVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQ 265 Query: 343 NKA 345 +A Sbjct: 266 RRA 268 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 77/329 (23%), Positives = 125/329 (37%), Gaps = 18/329 (5%) Query: 27 THNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADH 86 NPR KG P K G R + + K ED P+ R+ A Sbjct: 2 AGNPRAAKGKKGPSKGTGGLG----RKALEGKGPTPKAEDRPYHKAFRSKELSERSAAKR 57 Query: 87 GGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSR-PEAIVRAWFIQSVTPRFKEALR 145 G S S RR R E V G N+ ++ P + V R KE L+ Sbjct: 58 PGSS--SPSLQRTQRRGRPSEEMVTGRNSVVEALRAGIPAKALYIAVRIEVDDRVKEVLK 115 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---------GAQ 196 + + EL + + H G+ I + + Sbjct: 116 LASERGIPLMETHKPELDRMTDDAVHQGLALQIPPYDYPDAIDIAQETVDKFKKGYIKNS 175 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITG 255 ++AL+ ++P NLG ++RS + F + V+V + ++ + +A +T+ G A V Sbjct: 176 PLIVALDGITDPRNLGAIIRSVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPVARA 235 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLR 314 N+ L+ F+ GY V+ + L ++ + +V+G E +GL R+ D Sbjct: 236 GNLNRALESFKGMGYFVLGLDGDGDVSLPALAVAKEPVCIVVGSEGKGLSRLVRENCDQI 295 Query: 315 VKIDGTGNVAGLNISVATGVLLGEWWRQN 343 V I + LN S+A G+ L E RQ Sbjct: 296 VSIPIDSAMESLNASMAVGITLYEIARQR 324 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 7/264 (2%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + + R+ + V G + + +S E + + Q + Sbjct: 10 QNPLVKRLHQLLSRKGREEQQRFLVEGAHLVEEALKSGAEVVTVIYDQQRDMDPACQRAL 69 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---CVLAL 202 E L K S T+ G+ +KK +WV Q + +L L Sbjct: 70 ANHPEAVQVIAAPETVLAKLSETKSPQGIVAEVKK-TAADWAKWVDQKREEQGSLLLLFL 128 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + +P NLG ++R+ + GVV+ + + +G +R G + T ++V+ Sbjct: 129 DEIQDPGNLGTILRTAEAAAIDGVVLGSGSVDIYNGKVVRATMGALFRIPVFT-QSLVDT 187 Query: 262 LDDFRQAGYTVVTTSSEQ-GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 D+++ G V+ +S EQ + LV+G E G+ D V I Sbjct: 188 ADEWKAKGGRVLISSLEQNSVSYDEADYAGLTALVIGNEGRGVSKEMFAKADQFVHIPLY 247 Query: 321 GNVAGLNISVATGVLLGEWWRQNK 344 G LN +VA G+ + E R+ + Sbjct: 248 GGAESLNAAVAAGIFVYEAQRKRR 271 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 106/242 (43%), Gaps = 8/242 (3%) Query: 108 TRVYGENACQALFQSRPEA--IVRAWFI--QSVTPRFKEALRWMAANRKAYHVVDEAELT 163 ++G N + + + P+ I + F ++V +E A VV +L Sbjct: 1 MYLHGRNVLREILKLEPKKLKIKKVLFTDQKNVDRELEELKEHTAKKGYRMEVVPPEKLF 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQ--AGAQDCVLALENESNPHNLGGMMRSCAHF 221 S + H GV +K+ T+++ + + + ++ L+ +PHNLG ++RS Sbjct: 61 NLSREKKHQGVVINLKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAA 120 Query: 222 GVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G GV++ + A + + A ++ + G + + N+ ++ ++ G+ + E Sbjct: 121 GADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATMEGE 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 P + S K L+ G E +G+ + +D V I + LN++ + ++L E+ Sbjct: 181 -PYYSVSFTDKAALIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYR 239 Query: 341 RQ 342 RQ Sbjct: 240 RQ 241 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 6/243 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE-ALRWMAANRKAYHVVDEAELTK 164 + +YG + + + + +S T KE L D++ Sbjct: 2 KTELLYGMHPVREALLAGKRQFQAVYVSESRTGEGKEDILSLARERGIEVKTPDQSFFKG 61 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAG--AQDCVLALENESNPHNLGGMMRSCAHFG 222 GV + ++ V +AG L ++ ++P N G +MR+ G Sbjct: 62 QDRGG--QGVAARVSLFKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAG 119 Query: 223 VKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V GV++ D + S A + + G EH+ N+V + + G + Sbjct: 120 VNGVIMPDKRSSPLSPAVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASG 179 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 +++ L +V+G E +GL R D V I G + LN SVA + + E R Sbjct: 180 TVWEADLTGPAAVVVGNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMR 239 Query: 342 QNK 344 Q + Sbjct: 240 QRR 242 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 94/244 (38%), Gaps = 7/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAELT 163 + ++G A Q+ I + + + KE + V + Sbjct: 3 EKNEMIFGVRAVIEAIQAG-REIDKVLVKKDIQSELSKELFACLKNTLIPVQRVPVERIN 61 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 + + ++H GV I + V + G + L+ ++ N G + R+C Sbjct: 62 RITR-KNHQGVVAFISSVTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCEC 120 Query: 221 FGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 G +++ ++ + A++T+ G + N+ N + + G+ +V + + Sbjct: 121 AGADAIIIPSKNSVSVNADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAATEKG 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 K + + +++G E G+P D +KI G + LN+SVA G+L+ E Sbjct: 181 DYDYTKANYKDPVCIIMGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEA 240 Query: 340 WRQN 343 +Q Sbjct: 241 VKQR 244 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 8/235 (3%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTE 169 +YG + + +A+ ++ + + + + VD+ K Sbjct: 4 IYGRKPVLDTLDTD-IKVYKAYILKQNSKLVDKIIDKLNQKNIEISFVDKRFFDKI--DM 60 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 +H GV ++ ++++ + ++ L+ +PHNLG ++RS FG V++ Sbjct: 61 NHQGVMLEVESFKYSSLEDLSDSSR----LIILDKIEDPHNLGAIIRSAESFGFDAVIIP 116 Query: 230 DA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 + + + +T+ G +++ + N+ + D + G+ + + E + L Sbjct: 117 ERRSASVTSTVYKTSAGAINNIKVVRVTNLTRTIKDLKDKGFWIYGLAGEAHSDISHADL 176 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 K+ LV+G E EG+ R+ D+ + I G V LN SVA + + E RQN Sbjct: 177 RGKVGLVVGNEGEGISRLVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQN 231 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 101/285 (35%), Gaps = 31/285 (10%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQS------- 135 + + + + + R G E + + + +S Sbjct: 4 STSNQQMKNLTLLMKKAKARNEQGVFVAEGRKMFLEA---PVEWVKQVYVSESFYGTCTQ 60 Query: 136 ---------VTPRFKE------ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKK 180 TP+ E L + Y +V + S T+ G+ +IKK Sbjct: 61 GNMQDCMESCTPKHGEEKLNRKVLERLNETG--YEIVSDNVFKSVSDTQTPQGILCVIKK 118 Query: 181 RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAA 239 +++ + G Q +L LE+ +P NLG M+R+ G+ GV++ Q L + Sbjct: 119 PEYA-LEELIK--GEQTHLLILESIQDPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKT 175 Query: 240 IRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQE 299 IR+ G V ++ + ++ V + + K ++G E Sbjct: 176 IRSTMGSIYRVPFFITKDLAGTISSLKEQQVNVYAAHLKGTLSYDEPDYKKKTAFLIGNE 235 Query: 300 YEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 GL D D D +KI G V LN +++ +L+ E RQ + Sbjct: 236 GNGLSDEIADLADTYIKIPMQGQVESLNAAISASLLMYETGRQRR 280 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 8/258 (3%) Query: 92 KSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK-EALRWMAAN 150 ++F + ++ + + V+G A S E I + + + E + + Sbjct: 2 QNFQRHDRNEKRESNQM-VFGIRAVIEAIDSGKE-IESLFVQRGLGGSLFLELKALIKEH 59 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ---AGAQDCVLALENESN 207 + V +L + + ++H GV +I ++ + + G +L L+ ++ Sbjct: 60 EIGFQQVPIEKLNRITR-KNHQGVIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTD 118 Query: 208 PHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 NLG + R+ GV ++V + + AI+T+ G + DN+ V Sbjct: 119 VRNLGAIARTAECSGVHAIIVPKKGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLI 178 Query: 267 QAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGL 326 +G +V ++ + + ++ A +++G E G+ D +D KI G + L Sbjct: 179 DSGIQLVVSTEKTEESIYSVDYTAPTCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSL 238 Query: 327 NISVATGVLLGEWWRQNK 344 N+SV+ GV+L E RQ + Sbjct: 239 NVSVSAGVVLYEAIRQRQ 256 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 51/263 (19%), Positives = 106/263 (40%), Gaps = 11/263 (4%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ ++ E R R +E + G + S I + + + T R + Sbjct: 4 IRSKDNLHIKEAKKLKEKKYRIRRKEFIIEGFRFVKEAINSEFY-ISQIFLSEYFTNREE 62 Query: 142 EA-LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 L + + V + L S TE+ G+ ++K + ++ Q + Sbjct: 63 RFFLERNNKVKCPIYFVTDEILRSISCTENPQGIIAVVKNKE-------LNIKDEQGFYI 115 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIV 259 + +P N+G ++RS G G++ + + +R G ++ I +N+ Sbjct: 116 LADRIQDPGNMGTIIRSAHASGALGIITTKGTVDVYNEKTLRATMGSIFYIPIIQDENLE 175 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 + RQ G+ ++++S + + L K+++ +G E GL + +D+ V I Sbjct: 176 K-VSTLRQMGFKLISSSLDSDINFYDMDLRGKIIIAIGNEGNGLLQDVKKISDIEVNIPM 234 Query: 320 TGNVAGLNISVATGVLLGEWWRQ 342 GN LN +VA +++ E RQ Sbjct: 235 PGNAESLNAAVAASIMMFEVVRQ 257 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 107/257 (41%), Gaps = 5/257 (1%) Query: 90 SGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWF--IQSVTPRFKEALRWM 147 + + E + + +YG NA + + + R S + + Sbjct: 3 AREIRKSHEQESVKPSGRVYIYGRNAVRECLLAGRRKVYRLLVAYSHSASQTLEAIESLA 62 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC-VLALENES 206 A + V+ + L + + +H GV + + ++++ ++ + +L L++ Sbjct: 63 ARSGLQIERVERSILDRLTHGANHQGVVIEASEFSYSSIEDLLASGELRGKDILMLDSLQ 122 Query: 207 NPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDF 265 +P N G ++R+ FG+ V++ ++ + A + + G EH+ N+ Sbjct: 123 DPQNFGTLLRTAEVFGIGAVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNLARTASKL 182 Query: 266 RQAGYTVVTTSSEQGKP-LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 ++ GY V+ ++ ++ L + LV+G E G+ + R DL VKI G + Sbjct: 183 KEYGYWVLGLEYDESSSVIWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKIPQAGRIG 242 Query: 325 GLNISVATGVLLGEWWR 341 LN +VA + L E ++ Sbjct: 243 SLNAAVAGSIALYEIYK 259 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 5/249 (2%) Query: 99 VLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVV 157 R ++T +YG N + + + + ++ PR F+E R VV Sbjct: 2 RDSRDSEKQTVIYGRNPVREALR-GGRTLHKILVVRGADPRLFRELRELARPGRIPVQVV 60 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRS 217 + L + + H GV + ++ TV++ + ++ L +P NLG ++R+ Sbjct: 61 ERPLLDRLTDGGAHQGVAATVSVKDFATVEELL--GTENPLIVVLNAIQDPRNLGAILRT 118 Query: 218 CAHFGVKG-VVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 GV G VV A + AA +TA G E++ NI L +F+Q G VV Sbjct: 119 AEAAGVDGAVVPSRRAAPLTPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGAD 178 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + + L + LV+G E GL A R D V+I +G V LN SVA +L+ Sbjct: 179 PDGPVSYWDADLGGPLALVIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLI 238 Query: 337 GEWWRQNKA 345 E RQ +A Sbjct: 239 YEAVRQRRA 247 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 101/265 (38%), Gaps = 12/265 (4%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRF 140 A + I + + R++ V G + + + +S RF Sbjct: 4 SASNKSIKNVQALLSKAKERKKQGVFVVEGPKMSFEA---PYDWVSAVYMSESFFNDDRF 60 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 KE + +V ++ S T+ GV ++K + + + G + +L Sbjct: 61 KEEKKRFLD---KTEIVSDSVFKSMSDTQTPQGVLAIVKMPHY-EIDELFK--GDKTELL 114 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIV 259 LE+ +P NLG M+R+ GV G+++ + + +R+ G V D++ Sbjct: 115 VLESIQDPGNLGTMVRTGEGAGVSGIIMNRTTVDIFNPKTVRSTMGSLYRVPFYITDDLP 174 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 ++ + G ++ + + ++G E GL D D D ++I Sbjct: 175 ETIEYAKSKGVSLYAAHLKGKCSYDRPDYTGACGFMIGNEGNGLSDEIADMADTYIRIPM 234 Query: 320 TGNVAGLNISVATGVLLGEWWRQNK 344 G V LN +++ +L+ E RQ + Sbjct: 235 EGAVESLNAAISATLLMYECNRQRR 259 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 14/319 (4%) Query: 37 GRPGKSRADGGRRPARDDKQSQPR--DRKWEDSPWRTVSRAPGDE-TPEKADHGGISGKS 93 G + R DG + A + + R +K + ++ + + D + S Sbjct: 113 GNTSRLRRDGPKGKATREMITSNRIFSKKIGRTIGKSEKNYHVRSFSNKSQDLDTSTYFS 172 Query: 94 FIDPE----VLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEALRWM 147 FI+ + + E+ ++G ++ QA +S I R W V + +F + L+ + Sbjct: 173 FINDSNYDSLEKSSETEKDLIWGRHSTQAALESG-RPIHRIWCTSEVKSSSKFLQLLKKV 231 Query: 148 AANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ---AGAQDCVLALEN 204 A+ V A L + G H G+ + + + + G ++A+E Sbjct: 232 KASSVLVEEVSWARLGQLIGGSGHQGIALQMAAVETLDLTKLIEDCCHLGENPLLMAVEG 291 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 ++PHNLG ++RS G G+++ +G+ + A G EH+ N+ LD Sbjct: 292 LTDPHNLGAIVRSAEALGAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRSLD 351 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 + GY +V ++E L + L +V+V G E GL R D ++I G Sbjct: 352 ILKDKGYRIVGLATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRIPLRGAT 411 Query: 324 AGLNISVATGVLLGEWWRQ 342 LN SVA+ ++L E R+ Sbjct: 412 PSLNASVASALMLYEVARR 430 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 54/243 (22%), Positives = 87/243 (35%), Gaps = 17/243 (6%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R V G + +S E I + V E Sbjct: 23 RYEEGLFFVEGTTSVLEALKSNFE-IEYIVMGEGVKIDIP-------TGNFKIVHTTERV 74 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 K S T V +IK + + +N +P NLG ++R+ F Sbjct: 75 FKKISDTVTPQMVMAIIKIPKYEEDTYI----KDKGIYIIADNIQDPGNLGTIIRTADAF 130 Query: 222 GVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G + + + + + +R + G H+ I + +L +Q G V T + Sbjct: 131 GASAIFTINNCVDVFNPKVLRASMGSIFHIPVIVTAS--QILLKLKQRGIKVFATHLKAR 188 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K + + ++ K+ VLG E +G+ D D VKI TG LN+S+A G+ L E Sbjct: 189 KLVHECNISDKVAFVLGNEAKGVS--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQ 246 Query: 341 RQN 343 RQ Sbjct: 247 RQR 249 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 7/238 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G+N A +S + F + ++E + VD+ L K + Sbjct: 4 YIFGKNTVTAYLKSGQKPKNLYLFNKGN---YQEIVALAKEQGIRVQFVDKFRLDKMADG 60 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 H GV I+ ++Q+ + A + ++ + +PHNLG ++R+C GV GVVV Sbjct: 61 V-HQGVVIEIQDYKYHSLQEIIKGA-KNNLIVLCDQLEDPHNLGAILRTCDACGVDGVVV 118 Query: 229 -QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGKPLFKT 286 + ++ + + + G V+ N+V + + ++AGY VV + + Sbjct: 119 GKHRSVGLTSTVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDAVDYTEF 178 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 ++ +VLV+G E +G+ + D+ I G+V LN+SVATGVLL + R+ K Sbjct: 179 NVDMPLVLVVGSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIVRRRK 236 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 263 bits (672), Expect = 7e-69, Method: Composition-based stats. Identities = 64/237 (27%), Positives = 96/237 (40%), Gaps = 3/237 (1%) Query: 112 GENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G +A A+ Q PE + + P + L A + +L + Sbjct: 15 GIHAVAAVLQHAPERVRLLQLASGTLEPALAQLLEQAQARGISVERAGRDKLDQHHPGFQ 74 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQ-DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ 229 H GV R + V + D VL L+ ++PHNLG +R+ G +V Sbjct: 75 HQGVIVHCAPRPVVEEKALVQRVRNGLDLVLVLDGVTDPHNLGACLRTADAAGAGAIVTP 134 Query: 230 -DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 + + AAI+ A G AE V + N+ L + AG V + L+ L Sbjct: 135 RHHSAALTPAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLDGAAHEDLYAVDL 194 Query: 289 PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 +V+G E EG+ R+ D +I G V LN+SVATG+ L E RQ +A Sbjct: 195 RPPTAIVMGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARRQRRA 251 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 98/265 (36%), Gaps = 8/265 (3%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 + + + + R+ V G C+ L PE + + ++ Sbjct: 4 STSNKQVKRVVSLRSKAKARREEGMYVVEGLRMCREL---NPEDVDALYVTENFAGDAD- 59 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC-VLA 201 R V + + + T+ GV +++++ T + ++ Sbjct: 60 --NRKWMGRFRPETVSDVVMNVMADTQTPQGVLAVVRQKRYTMDDIVKPAPDGRSLAIMV 117 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 LE +P NLG ++R+ G+ G+V+ D A + + IR+ G + + D++ + Sbjct: 118 LETIQDPGNLGTIIRAGEGAGITGIVMNHDTADIYNPKVIRSTMGSIFRMPFVYADDLQD 177 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 + G + + + + ++G E GL + D VKI Sbjct: 178 ACLLMKNRGVRLFAAHLKGMNNYDQEDYTDNVGFLIGNEANGLTEETTSLADCLVKIPME 237 Query: 321 GNVAGLNISVATGVLLGEWWRQNKA 345 G V LN ++A VL+ E RQ ++ Sbjct: 238 GKVESLNAAIAASVLMFETARQRRS 262 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 5/240 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWF-IQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 + G NA + ++ E + S R + V L G Sbjct: 7 WIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGVGG 66 Query: 168 TEHHGGVCFL---IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H GV ++ ++ V AG Q +L L+ +PHNLG +RS A GV Sbjct: 67 GVRHQGVAARYAAVRLWEEHDLKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAAGVT 126 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V++ D ++ + +T+ G A+ + I N+ L + ++ + + E L Sbjct: 127 AVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVETSL 186 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L + LVLG E +GL R+ D+ +I G V LN+SVA GV L E RQ Sbjct: 187 YALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVRQR 246 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 7/254 (2%) Query: 97 PEVLRRQR-----AEETRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAAN 150 P L++ + ++ ++G NA + + + + ++ + A + Sbjct: 5 PSKLKKNKPLLGNHQKCWIWGRNAVRETLFAGFWPMYELHLSDHLKSEEIEQLEQQAARS 64 Query: 151 RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHN 210 + + ELT+ H G+ + T+++ + Q L L+ +P N Sbjct: 65 TIPVFISTDKELTQKCRASDHQGMIAKMAPFPYTSIELFNQQEITSPLFLILDRIQDPFN 124 Query: 211 LGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAG 269 G ++RS G G+ + RT+ G HV + ++V++ D++Q G Sbjct: 125 FGAIIRSAEIMGADGIFSGTHEQCEVTSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNG 184 Query: 270 YTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 +V T+ + + L + +++G E G+ + V+I G LN++ Sbjct: 185 INIVGTAMQASEKLNDYNFQQPTAVIVGNEGTGISPELQAECTHLVRIPQQGKTESLNVA 244 Query: 330 VATGVLLGEWWRQN 343 V+ +LL E RQ Sbjct: 245 VSASILLYEASRQR 258 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 8/239 (3%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG +A + + P I F + V R + + AY + ++ K G Sbjct: 6 LYGIHAIEKFLKQSPHLIYSLTFQKGPVNKRVQSLMDQAKRMGIAYQLEPKSFFNKLEG- 64 Query: 169 EHHGGVCFLIKK---RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 H GV + K N T ++ + A + L L+ +PHNLG ++R+ GV Sbjct: 65 -VHQGVVATVAKEADLNETDLKALLE-AESNPLFLFLDEVQDPHNLGAILRTADATGVTA 122 Query: 226 VVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 VV+ ++ + + A G AE V+ + N+V + + +QAG V + E L+ Sbjct: 123 VVIPKHNSVGVNATVRKVACGAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETNTTLY 182 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + LV+G E GL R+ D I G++ LN+SVATGV+L E +RQ Sbjct: 183 QLDFKGAVGLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQR 241 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 9/240 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG N + + + V F +R + A EL + +G Sbjct: 1 MLLYGRNPVLEALRDG--RVTEVLVARGVEEAF---VRSLKAFDVRLRFAPRIELDQLAG 55 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQA---GAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 T H GV ++ TV + +A G ++ L+ ++P N G ++RS G Sbjct: 56 TTQHQGVIAEVEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAH 115 Query: 225 GVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GVVV++ + S ++TA G ++ N+ ++D ++ G + + E + + Sbjct: 116 GVVVEERRSAPLSPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGAAGEAAQDI 175 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +T L K+ LV+G E EGL R+ D V+I G V LN SVA G+LL E R Sbjct: 176 GRTDLSGKVALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 5/245 (2%) Query: 101 RRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR-WMAANRKAYHVVDE 159 ++ VYG +A + + ++ + + + F LR A+ +V Sbjct: 2 DKKEGGAELVYGRHAVKEALLAG-RSLYKILVARGLGGAFFHELRSLAASRSVPVQIVPA 60 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCA 219 L + + H G L+ N ++ + + A C+L L ++P NLG ++R+ A Sbjct: 61 EALDRLTARGVHQGCVALVSPYNYASLDEIL--ATHPSCLLVLAYITDPRNLGAILRTAA 118 Query: 220 HFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE 278 GV+GV++ A + A++ + GGAEHV+ N+ L ++ G+ V+ ++ Sbjct: 119 AVGVEGVIIPSRRAAGLTAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEAD 178 Query: 279 QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE 338 L++ +V+V+G E GL R D+ V+I T + LN SVA V+L E Sbjct: 179 AKVSLWEAEWNEPLVVVIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYE 238 Query: 339 WWRQN 343 R+ Sbjct: 239 VLRRQ 243 >UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY01_SYNWW Length = 264 Score = 261 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 105/265 (39%), Gaps = 9/265 (3%) Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF 140 + + + R++ + G+ + + P+ + + + + + Sbjct: 3 RICSKDNKKIKYAARLKQKSFRKQEACFLIEGKKMLEEALK-HPKLLRQIFIEAELASEY 61 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 E + +VVD+ + S TE G+ L + + + + +L Sbjct: 62 TELYQQHPEW--ECYVVDKRLMKHISDTETPPGIVALCQIPSWSREEFL----SQNAFLL 115 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIV 259 L+ ++P NLG ++RS GV G+++ ++ S +R + GG ++ + ++ Sbjct: 116 YLDRIADPGNLGTIIRSGWALGVDGILLSPESVDPFSPKVVRASMGGIFNIPLLLDFSVD 175 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L +Q YT S + + +F +L +G E +G+ + D KI Sbjct: 176 E-LKRLKQNAYTFFCASLQARQEIFSLDFTGPSLLAIGSESQGVRPVIEEICDFNCKIPI 234 Query: 320 TGNVAGLNISVATGVLLGEWWRQNK 344 V LN +VA +++ E W+Q + Sbjct: 235 KPGVDSLNAAVACAIIINEAWKQRQ 259 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 48/239 (20%), Positives = 104/239 (43%), Gaps = 6/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G A +S I + + + + + E + + ++ A V +L + S Sbjct: 7 IFGLRAIIEAIESGS-TINKIYLQKGLRGSLYYELDKLIKDSKIATSTVPVEKLNRLSKN 65 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 +H G I + ++ + +A L L+ S+ N G ++R+ GV G Sbjct: 66 SNHQGAVAQISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAECTGVNG 125 Query: 226 VVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 +++ ++ + + I+T+ G A + D+I + L + + V + + ++ Sbjct: 126 IIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEKTDSSIY 185 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + +++G E+ G+ + D + K+ +GN+ LN+SVA GV L E RQ Sbjct: 186 DVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYETVRQR 244 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 104/242 (42%), Gaps = 7/242 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTK 164 ++ ++G ++ I + + ++ + E ++ + + V +L + Sbjct: 20 KDDFIFGLRPVIEAIEAGK-TIDKIFMQNALQGDIYYELKTLLSKHNIRPNYVPIEKLNR 78 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQ---AGAQDCVLALENESNPHNLGGMMRSCAHF 221 + ++H GV I ++Q + Q G +L L+ ++ N G + R+ Sbjct: 79 FTR-KNHQGVVAFISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECV 137 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 GV +++ A + AI+T+ G +++ N+ + +D +Q+G V + S + Sbjct: 138 GVHAIILPEKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQ 197 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K ++ +V+G E G+ +D ++K+ G LN+SVA G +L E Sbjct: 198 KLIYDVDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAV 257 Query: 341 RQ 342 RQ Sbjct: 258 RQ 259 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 27/282 (9%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 + I + + + R V G + + E I R + +S + Sbjct: 4 STSNAQIKELAKLQKKSRLRDERRIFLVEGPRMVEEI---PKERIERLYISESFERKNPA 60 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ------ 196 +R + V+ + + S T++ G+ ++K+ T ++ + ++ + Sbjct: 61 YIREL---GMPAEVLSDPVFSYVSDTKNPQGILAVVKRLEYT-MEDVLGKSALKCEEKSG 116 Query: 197 -------------DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRT 242 V+ L+N +P NLG + R+ G G+++ D+ + + IR+ Sbjct: 117 EKEKNPENHQIRVPHVIVLDNLQDPGNLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRS 176 Query: 243 AEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEG 302 G + ++ + G + ++G E G Sbjct: 177 TMGAVFRMPFFYVKDLPAAVKSLSSQGIRTYAAHLNGKNVYDEEDYTEGCAFLIGNEGNG 236 Query: 303 LPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 L D + D ++I G LN +VA VL+ E RQ + Sbjct: 237 LRDEVSECADCLIRIPMCGKAESLNAAVAAAVLMFEAGRQRR 278 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 6/239 (2%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASGTE 169 YG ++ ++L + PE ++ + ++ R ++ L + L K +G Sbjct: 8 YGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILELAEPFGISVQKASRDSLEKLAGLP 67 Query: 170 HHGGVCFLIKKRNGTTVQQW--VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV ++ + + Q Q +LAL+ ++PHNLG +R+ A G+ V+ Sbjct: 68 FHQGVVAAVRPHPVLNEKDLDQLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIAAVI 127 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY-TVVTTSSEQ-GKPLF 284 V D + + A + A GGAE V+ I N+ L + + VV T ++ P+ Sbjct: 128 VPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKALPIQ 187 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 K + +V+G E GL + D V I +GN+ LN+SVA G+ L E RQ Sbjct: 188 KYDFSGNVAIVMGAEDTGLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACRQR 246 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 108/261 (41%), Gaps = 5/261 (1%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 + + I + + R + G+ + + + I + + +S ++ + Sbjct: 4 SSSNSQIKNLIKLQKQSKVRNELKVFVCEGKKMFEEVASQQRNQIKKVYLAESYYHQYTK 63 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 + V+ + + +AS T G+ ++K+ T ++ +G +L L Sbjct: 64 QNPEYLK-GLDFEVLSDQVMKEASETITPQGILAIVKQPIYT-LKDM--TSGDSIRLLLL 119 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 E+ +P NLG M+R+ G+ G+V+ D+ + + IR+ G V ++ Sbjct: 120 EDIRDPGNLGTMVRTAEGVGMTGIVLSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDFYAC 179 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 L+ + + + K S K +++G E GL D A + R+KI G Sbjct: 180 LNQIKNEEIAIYAAHLQGAVWYDKVSYQGKSAILIGNEANGLSDKATSLSTQRIKIPMEG 239 Query: 322 NVAGLNISVATGVLLGEWWRQ 342 NV LN ++A VL+ E +RQ Sbjct: 240 NVESLNAAIAAAVLMYESYRQ 260 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 97/239 (40%), Gaps = 5/239 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++G N + S P+ E L + +L + + Sbjct: 9 YVIWGRNPVIEALVAGQSMEKILIAHDSKAPK--ELLDLAKERGIKVQIAPRQKLEELAN 66 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 T+ GV ++ ++ + + + L++ ++P N+G + R+ FG G+ Sbjct: 67 TKKTQGVVAILSPITYVPEEELFRKTIEEKGFFVVLDHITDPQNVGSIARTVEVFGGIGL 126 Query: 227 VVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 ++ D + + ++++ G H++ +I + F++ G V + GK + K Sbjct: 127 LIPKDRSAPINAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYALE-KGGKDITK 185 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 M +VLG E EG+ + +D+RV I G V LN+S A + L E ++ + Sbjct: 186 VDFAYPMCIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQE 244 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 106/244 (43%), Gaps = 9/244 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG +A QA+ + P+ + ++ RF+ ++ + + +V+ L Sbjct: 3 EIIYGIHAVQAILKRDPQLFKEVYLLERRNDQRFQCIIKQLKQKKIIIKIVNRQWLDMQV 62 Query: 167 GTEHHGGVCFLI----KKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 H G+ + ++ + ++Q +L L+ ++PHNLG +R G Sbjct: 63 KGATHQGIIARVQTNRRQFQEQDLPALLAQ-HTAPLLLVLDGVTDPHNLGACLRCADAAG 121 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V +++ + + + + A G AE + I N+ L ++ ++ T+ E Sbjct: 122 VNAIIIPRNRSAYLNATVKKVASGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEADS 181 Query: 282 PLFK--TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +++ + + LV+G E G+ + + ++I G+VA LN+SVA GV L E Sbjct: 182 HIYQTSFKFTSPIALVVGAEGNGIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFEV 241 Query: 340 WRQN 343 RQ Sbjct: 242 VRQR 245 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 3/260 (1%) Query: 84 ADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KE 142 D + R+ ++ +G NA ++ ++ P A + + + F + Sbjct: 5 KDKRKVRSDRSKGRTTSSRRSEDKDLCWGRNAVISMLETVPSACKKIYLATGIQTTFRDD 64 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 L N + + L + +G E H G+ I + Q+ + G +LA+ Sbjct: 65 LLSLAGKNAVEVTEANGSYLDEITGGEKHQGIVANIDLPKPRDLSQFSPKKG-PSLLLAM 123 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 ++ +PHN G M+R+ G GV+ ++ +G I+T+ G A V N+V Sbjct: 124 DHVKDPHNFGAMIRTAEAVGALGVIYPSRRSVGVTGTVIKTSAGAAFRVPLYEVTNLVRS 183 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 ++ ++ GY VV E+ + ++ + LP K+VL++G E EGL + + D +I G Sbjct: 184 MEILKKEGYWVVGLDHEEPRDIWSSPLPDKLVLMVGSEGEGLSRLSSERCDDLRRIPMVG 243 Query: 322 NVAGLNISVATGVLLGEWWR 341 LN SVA + + EW R Sbjct: 244 KTGSLNASVAAALGMFEWRR 263 >UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, group 3) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBT7_DESAH Length = 253 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 90/248 (36%), Gaps = 5/248 (2%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEA 160 R+ + G + + ++ + + R E L + D Sbjct: 3 RKSEAVEILCGIHPIREALRAGRRKFYAILVSKDRSRARLAEILGVAQEQSIPVEITDTM 62 Query: 161 ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA---QDCVLALENESNPHNLGGMMRS 217 L + H GV + + V Q +L +E +P N G ++R+ Sbjct: 63 TLDALTDNARHQGVAARVSPFATVRAEGIVKQMPKGVSNRFILVIETLEDPQNFGALIRT 122 Query: 218 CAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS 276 GV +++ + S + R + G EH + N +L + G+ V Sbjct: 123 ALCAGVDHIMIPKERSASPSPSVSRASAGAMEHAEISLITNTAGLLRQLKAMGFWVAGLD 182 Query: 277 SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLL 336 + PLF L +VLV+G E++G+ + D V + V LN SVA G+ + Sbjct: 183 GQGTTPLFSADLTGNLVLVVGGEHKGIRPLVKKECDFLVSLPIKAGVTSLNASVAGGIAM 242 Query: 337 GEWWRQNK 344 E RQ + Sbjct: 243 YEALRQRQ 250 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 4/241 (1%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE-ALRWMAANRKAYHVVDEAELT 163 A + +G N L + RPE + + + F++ R A R V+ EL Sbjct: 19 ASDDLCWGRNPVLTLLEHRPELCRKVFLLAGAQDEFRDTVARLCADGRIPLDFVEREELE 78 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + SG H GV + + V A ++ L++ +PHNLG ++R+ Sbjct: 79 RLSGGAVHQGVAARVAPIPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVA 138 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G VV Q D + +G ++T+ G A + N+ ++ ++ G+ VV Sbjct: 139 GAACVVCQNDRSATVNGTVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTD 198 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + ++ ++LP ++ LV+G E EG+ D+ VK G LN SVA + + EW Sbjct: 199 ETVWSSALPERLALVVGSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWV 258 Query: 341 R 341 R Sbjct: 259 R 259 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 113/360 (31%), Gaps = 46/360 (12%) Query: 30 PRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGI 89 G K++ ++K + + R T +R+ + Sbjct: 11 NSRGNFKKPTKKNKNVQNAHFTSNEKGAPYKKRTRVSGDSGTRARSSSAHARSFSSQKRS 70 Query: 90 SGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-----KEAL 144 SG S R + + G AC ++ + + +++ + + Sbjct: 71 SGASSAYMRPRRERGVRAPMIEGRRACFEALEAH-LPLKKLLVQENMNAALQTADVERLI 129 Query: 145 RWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA----------- 193 A V ++ + S H GV F ++ Sbjct: 130 TCARERGIACEYVKKSAMDSLSSHGAHQGVMFEAAPFAYAEFGDVLAAIDRKGARATDAS 189 Query: 194 ----------------------------GAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 V+ L++ + N G ++RS G Sbjct: 190 AADASAADASAADAHELVTNTDNQTAAHKQASLVVLLDHVVDEGNFGAIVRSAEVVGASC 249 Query: 226 VVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 V++ + A +T+ G H+ + N+ +D+ ++ G+ V+ S + ++ Sbjct: 250 VIIANARCASVGVGAYKTSAGAVLHMPIVQVVNLARAIDELKEHGFWVIGASEHAQQTVW 309 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 K+ L++G E G+ + D K+ G + LN++ A V+ EW RQNK Sbjct: 310 DAPFTGKVCLIMGSEENGISSLVQKKCDFICKLPQRGRIESLNVAQAATVMCYEWMRQNK 369 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 13/240 (5%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 ++ G NA + I + + R ++ L + D+ + Sbjct: 2 EKIIGLNAVREALDGSKN-IEKIEIYKGTNKDRIRDILSKASKKNIKIFYTDKRQ----- 55 Query: 167 GTEHHGGVCFLIKKRNG-TTVQQWVSQ--AGAQDCVLALENESNPHNLGGMMRSCAHFGV 223 E+ G+ L+ + + + +++ + A + VL L+ +P N G ++RS FGV Sbjct: 56 --ENSQGIAALVSEYDYYLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGV 113 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 G+++QD ++ + ++++ G EHV I N+ + +D ++ GY + ++ Sbjct: 114 DGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAEADGETE 173 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 + P K+ LVLG E +G+ ++ D + I G + LN+SVA G+LL E + Sbjct: 174 YYNEPFPEKLCLVLGSEGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISKN 233 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 93/267 (34%), Gaps = 15/267 (5%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 E + G+ + + +R GE L ++++ + + Sbjct: 2 HRIESPHNEGLKEIRELTKKAKKRWEKGMFVAEGERL---LLDLPASSLLQLYVQEDYKG 58 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 R + ++ + + S TEH G+ L++ + D Sbjct: 59 ALP---RGIEKEDSRICILSKKAMESISTTEHGQGILGLLRFPK--------KEKPKGDL 107 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDN 257 L LEN +P NLG + R+ GV + + + S +R+ G + ++ Sbjct: 108 FLILENIQDPGNLGTLFRTAEAAGVNHIFLSRNTVDPFSPKVVRSTMGSLFRLPFSIEED 167 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + + + + AG V + K F+ + + G E GL ++ I Sbjct: 168 LFFLCESLKSAGVQVFALDLDGKKTHFQAAFQGPSAFLFGNEGNGLTKELSQCATEKLLI 227 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQNK 344 G + LN++ + ++L E RQ + Sbjct: 228 PMEGKIESLNVATSASIVLYEAVRQRR 254 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 50/244 (20%), Positives = 107/244 (43%), Gaps = 6/244 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELT 163 E TR++G S+ + I + + + ++ P FKE R + V +L Sbjct: 2 EETTRIFGIRTVIEAIDSKKD-IEKVFIQKDLSGPLFKELNRNLKEGNYNISYVPVEKLN 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENESNPHNLGGMMRSCAH 220 K S +H GV I ++++ V + + L+ ++ N G ++R+ Sbjct: 61 KLSKNGNHQGVVANISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAEC 120 Query: 221 FGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV G+++Q + + ++T+ G ++ ++I + + + ++ + + Sbjct: 121 CGVTGIIIQEKGSAPINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKT 180 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 +F L + +++G E +G+ ++ D + K+ G++A LN+SVA G L E Sbjct: 181 DDVIFDIDLKQPIAIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEA 240 Query: 340 WRQN 343 RQ Sbjct: 241 VRQR 244 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 66/325 (20%), Positives = 121/325 (37%), Gaps = 23/325 (7%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K G R+ + K ED + +A + ++ + +D Sbjct: 7 KKGPTKGSGGKHRNKLKGYGPTPKAEDRVYHKAYKAKKVAERRQMADPRLAARRRVDKFA 66 Query: 100 LRRQRAEETRVYGENACQALFQSR-PEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVD 158 VYG N+ + P + + R +E ++ N D Sbjct: 67 SADTS---DLVYGRNSVLEALRVGVPSSTLYIMSRIEHDDRTREIVKIAGMNGLHMLEAD 123 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ-----------------DCVLA 201 E+ + + + +H GV + +++ + +A + +A Sbjct: 124 RLEMDRIARSGNHQGVILKVDPFQYSSLNELADRAEKKAKAMEAANSAAARIAARPLFIA 183 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ ++P NLG ++RS A FG GV++ + + + AA + + G A H+ N+ Sbjct: 184 LDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVNAAAWKVSAGAAAHMPVARVVNLTK 243 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L+ ++ GY VV K + +T +V+VLG E GL R+ D I Sbjct: 244 ALEGLKERGYYVVGLDGGGDKLVGETGFESDPLVVVLGSEGSGLGRLVRETCDAIAGIPI 303 Query: 320 TGNVAGLNISVATGVLLGEWWRQNK 344 + +V LN SVA G+ L + Sbjct: 304 SSSVESLNASVAAGISLYAVSNARR 328 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 101/267 (37%), Gaps = 11/267 (4%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQ--SV 136 + K+ R++ + + G R + + Sbjct: 2 KEVIKSSDNKNFKYLKKLYNKSFRKKEGKFILEGYRLIMEA--CGKARFDRIFMTPYFAK 59 Query: 137 TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ 196 T +E +R + H V L + TE+ G+ + + + + Sbjct: 60 TDEGEEIIRKFKDH-IPVHFVTGKLLYNVADTENPQGIAAI--TYVPRSGANILFHNRNR 116 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITG 255 +L L+ +P N+G ++R+ G++G++ ++ + + + IR + G + +TG Sbjct: 117 GIILILDRIQDPGNMGTIIRTAVAAGIEGIICLKGSVDIYNLKVIRASMGAIFSIPILTG 176 Query: 256 DNIVNVLDDFRQA--GYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDL 313 + L R Y ++ T K + ++LV+G E G+ + D+ Sbjct: 177 VSFKR-LQKIRDEYPDYKLICTDLNTSKFYHEIDYQEPLMLVIGNEARGIREELLSLADI 235 Query: 314 RVKIDGTGNVAGLNISVATGVLLGEWW 340 ++KI GN+ LN +V+T ++L + Sbjct: 236 KIKIPLMGNIDSLNAAVSTAIVLYDIV 262 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 97/264 (36%), Gaps = 8/264 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPRFKEA 143 ++ E R++ + + G + + +F + Sbjct: 14 QNPKIKQAVKLRERHARKQTDLFLIEGYRELLRAVDAG-RKMETLFFCPELYLGTNEASL 72 Query: 144 LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA--QDCVLA 201 ++ +A + + E+ K S + G+ + + +++ Q ++ Sbjct: 73 IQKIAKTGASLYQCTESVFKKLSYRDRPDGLIAIAPQF-HLSLEDLGKQLKNQNNPFLIV 131 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVN 260 E P NLG ++R G+ ++V D + + +R + G V I Sbjct: 132 AEAIEKPGNLGTILRCSDAVGLDALIVCDACTDIHNPNVVRASVGTLFTVPVIESQG-AE 190 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 L +Q G +++ + + L L + + +G E GL + D++V+I Sbjct: 191 TLQWLKQKGISILAATPHAKQELADIDLTGPLAIAVGTEQLGLSPQWMEQADIQVRIPMY 250 Query: 321 GNVAGLNISVATGVLLGEWWRQNK 344 G LN+++AT +LL E RQ K Sbjct: 251 GIADSLNVAMATTILLYEALRQRK 274 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 257 bits (657), Expect = 4e-67, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 19/255 (7%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS--VTPRFKEALRWMAANRKAYHVVDEAELTKA 165 + G++ + I R + ++ L A V A+L K Sbjct: 3 EFIEGKHPVWEALSTH-VPITRIFLADGNKHDRLLQDILHMAARQHIVMETVPRAQLDKR 61 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD---------------CVLALENESNPHN 210 S H G+ + ++ +++ Q ++ L++ ++ N Sbjct: 62 SKRGSHQGIMAQAQPFAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDAGN 121 Query: 211 LGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAG 269 LG + RS G G+++ + + + +++ G H+ N+ L + G Sbjct: 122 LGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALARLKNEG 181 Query: 270 YTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 Y V S + ++ +L + LV+G E GL ++ D V + G V+ LN++ Sbjct: 182 YWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLNVA 241 Query: 330 VATGVLLGEWWRQNK 344 + V + EW RQN+ Sbjct: 242 QSATVCMYEWLRQNR 256 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 129/345 (37%), Gaps = 9/345 (2%) Query: 6 KGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWE 65 + G+ + + DD + R +GG R R R R S Sbjct: 142 RRFEGRSEGGFRGRDDRGGSGGYRGRDDRGGFRGRDDRGGFRGRDDRGSSGSYRGRDDRG 201 Query: 66 DSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPE 125 R + + ++ + P ++ + +YG +A A Q Sbjct: 202 GF-RGRDDRRDDRDNFRPSRDRELNREVNTSP-AGDQEATDHELIYGRHAVLAALQGN-R 258 Query: 126 AIVRAWFIQSV--TPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNG 183 + R W + F E + A V + + + H G+ + Sbjct: 259 TLNRIWVTPRLRYESTFLELIDAAKAGGAVVDEVPVERIRQLTDGAVHQGIAAQVAPYPY 318 Query: 184 TTVQQWVSQAGA---QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAA 239 + ++QA A ++ + ++PHNLG ++R+ G G+V+ A+ + A Sbjct: 319 QELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEALGAHGLVIPQRRAVGVTAAV 378 Query: 240 IRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQE 299 + A G E N+ L++ + AG+ + + E + + +TS +VLV+G E Sbjct: 379 AKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAAGEAKQSIHETSFSGPVVLVVGSE 438 Query: 300 YEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQNK 344 EGL R+ D + I G LN SVA G++L E RQ + Sbjct: 439 DEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYEVSRQRQ 483 >UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepID=C0WU39_LACBU Length = 255 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 12/262 (4%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ + R + + + G + + + I F Sbjct: 4 ITSNQNNRVKEWRKMQSKKGRLSSGQYIIEGWHIVDEAIKHD-QQIDAVIVT---DANFL 59 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 + L + +++ S TE GV ++ N + + G L Sbjct: 60 DQLE-VDPAVTDTYLITPEVAKHISATETPQGVFAVLTTENYH--ESIPEKLGGS--WLM 114 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+N +P N+G M+R+ G+ GV+ + A + + +R+ +G HV+ ++ Sbjct: 115 LDNIQDPGNIGTMVRTADAAGMNGVIFGKGTADIYNPKVVRSMQGSQFHVRLY-SGDLAV 173 Query: 261 VLDDFRQAGYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 + F + V T +Q + LV+G E G+ D D + I Sbjct: 174 WMAAFNKHNVPVYGTELNDQAISYDDVEPTKQFALVMGNEGNGVSADLLDKTDQNLYIPM 233 Query: 320 TGNVAGLNISVATGVLLGEWWR 341 G LN++VATG+L+ + + Sbjct: 234 NGEAESLNVAVATGILIFHFVK 255 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 256 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 111/271 (40%), Gaps = 10/271 (3%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 E + K + Q + V+G + +S + I + + + ++ Sbjct: 2 ENRRNPRVNRPNYKPRPGGSKPQYQPQPDEMVFGIQSVIETLKSD-QQIDKLYMEKGLSN 60 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGA 195 + R V L + + ++H GV LI + + ++ + G Sbjct: 61 --PDIQNLAFQKRVTIQRVPVERLDRFTR-KNHQGVVCLIAQVQYVKLSNVIADVFERGE 117 Query: 196 QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPIT 254 L L+ ++ N G + R+ G++ +V+ A + A++T+ G H+ Sbjct: 118 VPFFLLLDRITDVRNFGAIARTAECTGIQCIVIPGRGAAAINSDAMKTSSGALNHISVCR 177 Query: 255 GDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK--TSLPAKMVLVLGQEYEGLPDAARDPND 312 ++ + +++G TVV + + + L++ T L M +++G E +G+ D Sbjct: 178 EPDLTETVKYLQESGITVVACTEKSARDLYERTTDLTGPMAIIMGSEEDGISPELLRMVD 237 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 VKI G V LN+SVATGV+L E RQ Sbjct: 238 THVKIPLLGAVGSLNVSVATGVILYEAVRQR 268 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 256 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 96/259 (37%), Gaps = 14/259 (5%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + + R++A + GE+ + + R + I + +K Sbjct: 4 ISSPKNEKIKELVKLQTAKGRKKAGMYLLEGEHLVEEAIKERAQ-IKLIVVTSNRLEDYK 62 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 L A VV + K S TE G+ +++ + + + Sbjct: 63 NLL---AQTDVQVLVVSQDVFHKLSMTETAQGILAVVEIVKQEIL-------PHKGRFIV 112 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +P NLG ++R+ G VV+ L + +R+ +G H+ N+ Sbjct: 113 LDAVQDPGNLGTIVRTADAAGFDAVVLGTGTVDLYNDKVLRSMQGSHFHIPVFQA-NLQE 171 Query: 261 VLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L ++ G V T+ K + +V+G E +G+ D D D+ V I Sbjct: 172 YLPILKEKGVQVAVTALHRDSKDYSVLQGATDVAIVVGNEGQGVSDDVIDLADVVVTIPI 231 Query: 320 TGNVAGLNISVATGVLLGE 338 G LN+S+A+ +L+ + Sbjct: 232 FGKAESLNVSIASALLMYK 250 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 94/265 (35%), Gaps = 8/265 (3%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 T + + + R + + + G + + + + + Sbjct: 3 TNINSKDNEKLKYTRALLKSKNRNKESKFIIEGYRIVMLALECMAN-LDYVFINEEFENK 61 Query: 140 --FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + L + + + TE+ G+ ++ + + Sbjct: 62 KEHVKLLEDLDKKNTKIYKTTNKNFKELVDTENTQGIIGVVSFKKKKLSESI---NKKDK 118 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGD 256 VL L+ +P N+G ++R+ GV ++ ++ + + IR+ G + I Sbjct: 119 FVLILDRIQDPGNMGTIIRTADSAGVDAIIALKGCVDIYNPKVIRSTMGSIFDMNII-DA 177 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 + +D + + +V++ K +K+ LV+G E G+ + +D+ VK Sbjct: 178 SQDETVDMLKSLDFNIVSSYLNTENFYDKIDYGSKVALVIGNEANGINEELVSKSDILVK 237 Query: 317 IDGTGNVAGLNISVATGVLLGEWWR 341 I G LN ++++ +L+ E + Sbjct: 238 IPIYGKAESLNAAISSAILMYEIKK 262 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 64/325 (19%), Positives = 121/325 (37%), Gaps = 24/325 (7%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K G R+ + + K ED + +A + ++ + Sbjct: 4 KKGPTKGSGGKHRNSLRGKGPTPKAEDRVYHKAYKAKKQAEKRQRSDPRLAARRRAAHF- 62 Query: 100 LRRQRAEETRVYGENACQALFQSR-PEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVD 158 + V G N+ + P +++ R +E +R + D Sbjct: 63 ---TSNSDDLVIGRNSVLEALRVGVPASVLYVANRIEHDDRTREIVRLAGQHGLNLLEAD 119 Query: 159 EAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ-----------------DCVLA 201 E+ + + + +H GV +++ + V +A + +A Sbjct: 120 RLEMDRIARSGNHQGVILKADPFQYSSLHELVERAERKARAMEMADSKASRLSARPLFIA 179 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ ++P NLG ++RS A FGV GV++ + + + AA + + G A H+ N+ Sbjct: 180 LDGITDPQNLGAVIRSAAAFGVNGVILPERRSASVNAAAWKVSAGAAAHMPIARVVNLTK 239 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 ++ ++ GY + K + +T +V+VLG E +GL R+ D I Sbjct: 240 AIEALKERGYYSIGLDGGGSKLVGETGFETDPLVVVLGSEGKGLSRLTREACDAIASIPI 299 Query: 320 TGNVAGLNISVATGVLLGEWWRQNK 344 T V LN SVA G+ L + Sbjct: 300 TSAVESLNASVAAGIALYATVNARR 324 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 7/250 (2%) Query: 99 VLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVV 157 R+ E V G N L ++ + + ++ E + A H V Sbjct: 3 SKNNSRSSENVVCGRNPVLELLKAARRTVNKIMVSRTARGVVISEIINLAKQKGIALHSV 62 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA--QDCVLALENESNPHNLGGMM 215 +L K S E G+ + T + + ++ + ++ L+ +PHNLG ++ Sbjct: 63 PPEKLDKFS--ESSQGIVAEVSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAII 120 Query: 216 RSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 R+C FG GV++ A + +++ G EH+ +N + ++ + +V Sbjct: 121 RNCVAFGADGVIIPKWRAAGVNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVG 180 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 G+ L K LP + +++G E GL + +D + I ++ LN S A+ V Sbjct: 181 AE-NGGRILEKIDLPFPLAVIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAV 239 Query: 335 LLGEWWRQNK 344 +L E ++ K Sbjct: 240 ILYEIAKKRK 249 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 98/261 (37%), Gaps = 10/261 (3%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEAL-RWMAANR 151 Q E+ VYG+N L +S + + + P Sbjct: 8 RRPRRSSTEEQPKNESLVYGKNPVTELLKSGS-GVDTVLIAEGMAPAVAAYYTAMAKEAG 66 Query: 152 KAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWV---SQAGAQDCVLALENESNP 208 V +L +GTE H GV + TV+ + + G ++ + +P Sbjct: 67 ATVKRVHPNKLRLMTGTESHQGVAAFASEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDP 126 Query: 209 HNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQ 267 HNLG +MRS G G+V+ + I+++ G AE + NI + + Sbjct: 127 HNLGAVMRSALLCGAHGIVIPKRGGASVTPTVIKSSAGAAERLPVARVANIGETIRRLKD 186 Query: 268 AGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG---NVA 324 G V + PL K +L + LVLG E G+ + D V++D V Sbjct: 187 QGVFVYCADMDG-VPLRKNNLTGPIALVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGVD 245 Query: 325 GLNISVATGVLLGEWWRQNKA 345 N+SVA G++L E Q A Sbjct: 246 SFNVSVAAGIILYEIQSQRAA 266 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 99/262 (37%), Gaps = 17/262 (6%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 ++ R + + GE+ + +S P + R Sbjct: 2 KQIESAKNQKVKDWKKLHTKKERTKTNTFLIEGEHLVEEALKS-PGIVKEILVKDET--R 58 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 L +++ E + + TE + + ++ ++ A V Sbjct: 59 IPSDLE----TGIQCYMLSEDAFSAVTETETPQQIAAVCHMP-----EEKLATARK---V 106 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNI 258 L ++ +P NLG M+R+ G+ VV+ D A +G +R+A+G H+ + N+ Sbjct: 107 LLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTLRSAQGSHFHIPVVR-RNL 165 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + +D+ + G V T+ + G P + L++G E G+ A + DL + + Sbjct: 166 PSYVDELKAEGVKVYGTALQNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVP 225 Query: 319 GTGNVAGLNISVATGVLLGEWW 340 G LN++VA +L+ Sbjct: 226 LYGQAESLNVAVAAAILVYHLR 247 >UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 Length = 259 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 89/257 (34%), Gaps = 13/257 (5%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + R++ + G + Q+ + + + + Sbjct: 9 KNARVKEWKKLQTRKGRKQQGRYLLEGWHLVNEALQAD-RGLHELIGTKEELAAHPDIVA 67 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + V A + + T G+ + + V +S A L L+ Sbjct: 68 RFKE----VYSVTPAIMAAVTETVTPQGIMVVADLPDLHQVATDLSGA-----WLFLDRV 118 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N+G M+R+ G GVV D A L S +R+ +G H+ ++ +D Sbjct: 119 QDPGNVGTMVRTADAAGFAGVVAGDGSADLFSPKVVRSMQGSQFHLALYE-GDLKKWFED 177 Query: 265 FRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 +QAGY V T K + LV+G E G+ + + I G Sbjct: 178 VKQAGYPVYGTQLNPAAKDFRIVTPQGGFALVMGNEGRGMSEELLKQTTANLYIPMRGQA 237 Query: 324 AGLNISVATGVLLGEWW 340 LN++V+ G+L+ E Sbjct: 238 ESLNVAVSAGILMFELA 254 >UniRef50_Q5WEJ4 23S rRNA methyltransferase n=2 Tax=Bacilli RepID=Q5WEJ4_BACSK Length = 246 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 94/259 (36%), Gaps = 19/259 (7%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 ++ R + + GE+ + ++S + Sbjct: 2 KRIESVKNERIKAWKKLHSKKGRDQTGRFLIEGEHLVEEAWKSD-WKVETVLTTADDASL 60 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 F V EA + + S T+ G+ + +K+ T ++ + Sbjct: 61 FP----------GECIGVSEAVMKELSETKSPQGIVAVCQKKQWHTPERL------KGRF 104 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNI 258 + L+ +P N+G ++R+ GVV+ A L + IR +G H+ ++ Sbjct: 105 VLLDRVQDPGNVGTIIRTALAADAAGVVLGSGCADLFNAKVIRATQGALFHLPVY-MGDL 163 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 V ++ +++G V TS + P + + L+LG E EG+ D + I Sbjct: 164 VTWIEALKESGIPVYGTSLQDATPHDQFHSQEQFALLLGNEGEGVQSHLLDAATENLFIR 223 Query: 319 GTGNVAGLNISVATGVLLG 337 LN+SVA G+LL Sbjct: 224 QNRKAESLNVSVAAGILLF 242 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 13/249 (5%) Query: 98 EVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHV 156 + R ++ G N + +S I + + + KE L + Sbjct: 4 NKEKAGRNVMEKIIGINPVTEVLKSDKN-IEKIEVYKGIKKDTIKEILNLASKRNIKIFY 62 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNG-TTVQQWVSQ--AGAQDCVLALENESNPHNLGG 213 D TE+ GV L+ + + + ++ + A + V+ L+ +P N G Sbjct: 63 TDRR-------TENSQGVVALVSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGA 115 Query: 214 MMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++RS FGV G+V+QD + + ++++ G EHV I NI + +D F++ GY V Sbjct: 116 IIRSAECFGVDGIVIQDRNNVKVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKV 175 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 ++ ++ S P K+ LVLG E G+ R+ D +KI G LN+SVA Sbjct: 176 YGAEADGENLYYEESYPKKVCLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAG 235 Query: 333 GVLLGEWWR 341 G++L E + Sbjct: 236 GIILAEMSK 244 >UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8M2_SHEAM Length = 333 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 122/331 (36%), Positives = 185/331 (55%), Gaps = 2/331 (0%) Query: 15 MYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSR 74 R+D + G G ++ R D S RT R Sbjct: 2 RPARADRYQGRNQQERTQGDKGSTVEHAQGREDRARKGADGCSGKGRFDRNTGSGRTERR 61 Query: 75 APGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQ 134 + QR ETR+YG NAC+ F+ R + +++ + + Sbjct: 62 DAYHHREAPRREPAHRATGAQAGFDGKDQRLNETRLYGINACRETFKLRSDEVIKLYLDE 121 Query: 135 SVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ-- 192 P+F + ++++A NRKAYHVVD EL K +G++HHGGV +++++ + +++ Sbjct: 122 ETAPKFADVMKYLARNRKAYHVVDADELEKIAGSQHHGGVVMVVRRKPVQDIAGYLAANT 181 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQP 252 A ++DC+LAL+ NPHNLG +MRSCAHFGV G+V+ +A LL+SGAA RTAEGG EHV+ Sbjct: 182 AKSRDCLLALDGVGNPHNLGAIMRSCAHFGVAGIVMTEAGLLQSGAAARTAEGGMEHVEG 241 Query: 253 ITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPND 312 I D + + L R AGY+++TTSS G+ L+++ LPA++V+V G+E +G+ A D Sbjct: 242 IRCDRLTDALQLCRDAGYSIITTSSHGGESLYRSKLPARVVVVFGEEMDGVSKAVASRAD 301 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + V+I GTG V LN+SVA ++LGEW+RQ Sbjct: 302 IGVQIPGTGLVESLNVSVAASLILGEWYRQQ 332 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 102/248 (41%), Gaps = 9/248 (3%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTP---RFKEALRWMAANRKAYHVVDEAE 161 ++ VYG +S+ I + +F + +KE + V + + Sbjct: 2 SKLEIVYGIRPLIEAIRSKK-TISKLFFQRGFRKISNAYKELISLSKKENIPIQTVPKQK 60 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSC 218 + ++H GV ++ ++ + + G ++ L+ ++ N G ++R+ Sbjct: 61 FYQL-KNKNHQGVFAILSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRTS 119 Query: 219 AHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS 277 A G +++ + +I+T+ G V NI N ++ +G +V+ + Sbjct: 120 ACVGADAIIIPKKYTAMIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSATE 179 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + + L+LG E +G+ + + + KI ++ LN+SVA GV+L Sbjct: 180 KSNIYWYNIDFSGPTALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVILY 239 Query: 338 EWWRQNKA 345 E +RQ K+ Sbjct: 240 EVFRQRKS 247 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 72/333 (21%), Positives = 120/333 (36%), Gaps = 17/333 (5%) Query: 22 DSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPR--DRKWEDSPWRTVSRAPGDE 79 +++ R G + + G RR + + P+ DR Sbjct: 2 PGNEQYPGARRRPGSKKGPTKGSGGNRRQGLEGRGPTPKAEDRVGHPKARAKARAEARAA 61 Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAW--FIQSVT 137 P + + F PE V G NA ++ I R + Sbjct: 62 QPTRTKQLEKIRRRFDVPE-------GYEIVCGRNAVAEAARAG-VPISRVFMAVSAESD 113 Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQA---G 194 R +R + +L + H GV + T+ + +A G Sbjct: 114 DRLGAVVRRATLIGCPVLETTKLDLEALTDGAVHQGVAIEVPAYGYTSALDLLDRARAVG 173 Query: 195 AQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPI 253 ++AL+ ++PHNLG ++RS FG GV++ + ++ + + + G A V Sbjct: 174 HTPLLVALDQVTDPHNLGAVLRSTGAFGGDGVIIPERRSVGVNATVWKVSAGAAARVPVA 233 Query: 254 TGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA-KMVLVLGQEYEGLPDAARDPND 312 N+V L+ ++ G VV + SL +VLV G E GL R+ D Sbjct: 234 RETNLVRTLETLKKEGCFVVGLDGGGETLMEDLSLADSPLVLVTGAEGAGLSRLVRETCD 293 Query: 313 LRVKIDGTGNVAGLNISVATGVLLGEWWRQNKA 345 + I + V LN +VATG+ L E R +A Sbjct: 294 VIASIPISQTVESLNAAVATGISLYEVDRLRRA 326 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 47/239 (19%), Positives = 98/239 (41%), Gaps = 5/239 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 E +YG N + I + + + L+ + + E+T Sbjct: 2 QEYIYIYGINPVVESLLNPAVKINKLYLLPQ-GKNNDYYLKLAKSRQLKVVFCSAVEMTT 60 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQDCVLALENESNPHNLGGMMRSCAHFG 222 T H + I K ++ ++A +L L+ S+PHN G ++R+C F Sbjct: 61 LVQTSKHQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFN 120 Query: 223 VKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QG 280 V GV+ + + + +T+ G +V +N+ N ++ ++ G+ + TS + Sbjct: 121 VDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNTKA 180 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + + + + L++G E G+ D + I G++ LN+SVA+ +L+ + Sbjct: 181 QNVSELKYDIPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQI 239 >UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veillonella RepID=D1BMG9_VEIPT Length = 264 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 91/262 (34%), Gaps = 5/262 (1%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ + + RQ+ E V G + + + + ++ Sbjct: 4 IQSKDNKTIKRIISLRQRKNRQKNGEYIVEGIRSIRDIAAMGAVKTIVIRESKAQDKNIL 63 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 + L ++ + K T + GV ++ K S + + Sbjct: 64 DLLDLDTVQSVPKYIAQDPVFDKVDNTVNGQGVVAIVSKPTY----DIESISIVDGLYIT 119 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +P NLG ++R+ GVKG+ + + + +R+ + + Sbjct: 120 LDGVQDPGNLGTIIRTAVAAGVKGIFLMKGTVDPFNDKTVRSTMSALHKIPLYEDITLTL 179 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 + D ++ T T+ E P + +LVLG E G+ + R+ I Sbjct: 180 LHDMVTESNMTSYVTALEHSNPYHTVRYAKRTMLVLGNEGNGVTPEVMNLCTNRIMIPMY 239 Query: 321 GNVAGLNISVATGVLLGEWWRQ 342 G++ LN+SVA + + + Q Sbjct: 240 GDMESLNVSVAAALCMYKVQEQ 261 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 55/287 (19%), Positives = 106/287 (36%), Gaps = 7/287 (2%) Query: 58 QPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQ 117 + R + + + R + V G + + Sbjct: 2 RNASRYHGLRKTKLDQSPNDRLRLITSRQNNAVKELRAAFHTGRPTDDGYSAVEGVHLLE 61 Query: 118 ALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFL 177 +S +F Q+ R + L + +N ++ + + A TE GV L Sbjct: 62 EAIRSGLR-FKTIFFSQAAEDRAGKLLPQIHSN-VETLLLPDEVFSSAVLTESPQGVAAL 119 Query: 178 IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLES 236 +K + ++ + +L + +P NLG ++RS FG GV++ D A + Sbjct: 120 VKLKTFK-LEDLLRA--ENPMLLGVAGVQDPGNLGTILRSAEAFGATGVLIGDKTASPWN 176 Query: 237 GAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVL 296 IR + G + + + L+ R G ++ TSS +G+PL + ++++ Sbjct: 177 PKVIRGSSGSVFRLPVVKVE-WPAALEQLRAKGVQILATSSHKGEPLPEVDFTGPTIVLI 235 Query: 297 GQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 G E G+P D + I + V LN +A +++ E RQ Sbjct: 236 GGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQR 282 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 59/242 (24%), Positives = 89/242 (36%), Gaps = 10/242 (4%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVT-PRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G + I + Q V+ + V EA L S Sbjct: 11 GRGPVLEALKRDDLGIEKVMLKQDVSGAQIGAIRSIADDRGTPVQYVPEARLRHESDGAT 70 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAG--------AQDCVLALENESNPHNLGGMMRSCAHFG 222 H GV + V +S AQ +L ++ ++P N G M+RS G Sbjct: 71 HQGVVAITAPIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAMLRSAVAAG 130 Query: 223 VKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 GV+V + AAI+ + G A + D++ VL ++ GY V Sbjct: 131 TDGVIVPTREMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYGAEGTAET 190 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 PL+ + +VLG E +GL + D + I G LN+SVATG+L+ E R Sbjct: 191 PLWDADWDRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGLLVFEAAR 250 Query: 342 QN 343 Sbjct: 251 SR 252 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 110/258 (42%), Gaps = 7/258 (2%) Query: 91 GKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAA 149 K F + ++ ++G ++ E I + +++ +E Sbjct: 7 KKRFSSSYDENKPANDKDMIFGIRPVIEALEAGKE-IDKILIQRNIEQAVVQELFELANR 65 Query: 150 NRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENES 206 + V +L + + ++H GV + N ++ VS ++G ++ L+ + Sbjct: 66 VKVPVIKVPVEKLDRVTR-KNHQGVICYLSAINFASLDNIVSACFESGKNPLLVMLDRVT 124 Query: 207 NPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDF 265 + N G + RS GV ++V A + A++T+ G H+ D++++ + Sbjct: 125 DVRNFGAVARSAECLGVDAMIVPSRGAAQLNSDAVKTSAGALYHIPVCRVDHLIDTVKYL 184 Query: 266 RQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAG 325 +Q G ++ S + ++ L V+++G E +G+ D V I +G++ Sbjct: 185 KQCGLRIIACSEKASINVYDEDLTDPCVILMGSEEDGISMDLLRYADAHVTIPMSGHINS 244 Query: 326 LNISVATGVLLGEWWRQN 343 LN+SVATG++L E RQ Sbjct: 245 LNVSVATGMILSEVTRQR 262 >UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D0U2_PELTS Length = 270 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 4/262 (1%) Query: 84 ADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE- 142 + R++ + + G + S + + + R E Sbjct: 3 SRQNSRIKYLRRLGSRRFREKEGKFLIEGVRFVEEALNSAWPVEMLVYCRRITETRRGEA 62 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 L + VDE+ + +GT G ++KK +++ + G ++ + Sbjct: 63 LLEKASFQGVPLVEVDESLFGELAGTTTPQGALAVVKK-GKVSLED-LQAGGEPALLVIV 120 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + +P NLG ++RS G GV++ + A + + A+R G +V + V Sbjct: 121 DGVQDPGNLGTIVRSAGAAGAGGVILLKGTADIFNAKALRATMGAIFYVPVVQDVTSVEA 180 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 + +Q G V K ++ L LVLG E G + RV+I G Sbjct: 181 MTYLKQLGIKAVAGDPRGDKLIYDCDLTVPCALVLGSEAAGAGEPVLRMVAERVRIPMPG 240 Query: 322 NVAGLNISVATGVLLGEWWRQN 343 LN++V++ VLL E RQ Sbjct: 241 RAESLNVAVSSAVLLFEAVRQR 262 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 55/243 (22%), Positives = 95/243 (39%), Gaps = 6/243 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 VYG + +++ P I+ + + + R K + + L S Sbjct: 3 ELVYGIHTVESIVNQSPNRILIVYIVSNPRDLRLKSLIYRIRKMNINIQECTRRVLNIKS 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ----DCVLALENESNPHNLGGMMRSCAHFG 222 H G+ + + + +L L+ ++PHNLG +RS G Sbjct: 63 MKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADAAG 122 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 V ++V D + + + A G ++ V + N+ L ++ +V + + Sbjct: 123 VHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRSNQ 182 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 LF T L + LV+G E G+ R+ D V I + LN+SVATG+ L E R Sbjct: 183 ILFNTRLIDPIALVMGSESSGIRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFETVR 242 Query: 342 QNK 344 Q K Sbjct: 243 QRK 245 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 98/239 (41%), Gaps = 7/239 (2%) Query: 110 VYGENACQALFQSRPEAIVRAWFIQS-VTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 ++G A + I + + + ++ + + V A+L K Sbjct: 7 IFGSKAVLEAILAGK-TIDKIFIDKDTKNADYQSIFNAIRYKQIPCSRVPVAKLNKLVPL 65 Query: 169 EHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 +H G+ L+ T+ V + G ++ L+ ++ NLG ++R+ G Sbjct: 66 -NHQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGAHA 124 Query: 226 VVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 +V+ + A++T+ G H+ N+ ++ + +G V+ + ++ Sbjct: 125 LVLPKQGSASLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACHEKTQTSIY 184 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L ++LG E +G+ + D++ I G ++ LN+SVA ++L E +RQ Sbjct: 185 QVKLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFRQR 243 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 92/265 (34%), Gaps = 8/265 (3%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TPR 139 + + R + G A + +F Sbjct: 7 ISSLQNPRVKNLVKLRDRRPRNQQGLFIAEGYRAISRALEKDVVP-TEIYFCPDCFLGDN 65 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 L A + + K + + G+ +IK+ N T + Q + Sbjct: 66 EDALLAQAQAAGATLFELSKHAFEKVAYRDRPEGLLAVIKQWNHT-LDDL--QLSDPPFL 122 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNI 258 L +E P NLG ++RS GV V+ D+ L + A+R++ G + +T + Sbjct: 123 LIVEAIEKPGNLGTILRSADAAGVDAVICCDSVTDLFNPNAVRSSTGVLFSMPTVTASS- 181 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 V+ RQ G + T+ T L + +V+G E GL + D +V I Sbjct: 182 DEVIKWIRQKGIRTIATTPHTDILYTDTDLRGPLAIVMGSEQFGLSEKWLSACDTKVLIP 241 Query: 319 GTGNVAGLNISVATGVLLGEWWRQN 343 G LN+++AT + L E RQ Sbjct: 242 MAGQADSLNVAMATLITLFEAVRQR 266 >UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH5_9CLOT Length = 270 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 101/261 (38%), Gaps = 6/261 (2%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 ++ + + + R++ E G C+ I+R ++ + R+ + Sbjct: 7 SKENPAVKHAARLLKSAKFRRQEEAFLAEGVRLCRDA-AYSGVRILRMFYTEEALERYPK 65 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 + + + ++ + S T G+ + + T + +G +L L Sbjct: 66 DVELLREKAERAFLLSQQLAGGLSATVTPQGIFCVCAMLDKTDCLDKMDASGQ---LLGL 122 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 E+ +P NLG ++R+ G+ GV++ + S +R + G + + + Sbjct: 123 EDIQDPSNLGTVLRTAEALGIGGVILTRGCCDIYSPKVLRGSMGAVFRLPMALVETMPPA 182 Query: 262 LDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 ++ Q G+ + + + +P+ + + ++++G E GL RV I Sbjct: 183 VNALEQKGFVTMAAVPDREAEPITQVLFSSPSIVLVGNEGNGLKPETIRACQRRVTIPML 242 Query: 321 GNVAGLNISVATGVLLGEWWR 341 G LN SVA +L+ E R Sbjct: 243 GRAESLNASVAASLLMWEMMR 263 >UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B15F Length = 242 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 49/257 (19%), Positives = 96/257 (37%), Gaps = 24/257 (9%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ + R V G + + ++ Sbjct: 2 IQSVNNKTIKDLVKLKNKKTRDEKGLFLVDGFHMVEEAKKAG--LCDLVISTDESL---- 55 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 + VV ++ + K S T+ + + K++ + D VL Sbjct: 56 -------EGQDKVLVVSDSVMEKLSYTKTPQPIMAVCHKKD--------NILKHYDRVLI 100 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +P NLG ++RS FG K +V+ D L + A+R+ +G H+ + D++ + Sbjct: 101 LDGVQDPGNLGTILRSALAFGFKQIVMSPDCVDLYNDKALRSTQGAVFHLDIVR-DDLHH 159 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 V+ + ++ G V+ TS + KM V+G E G+ D +D + I Sbjct: 160 VIPELQKLGVRVIATSLHNASSIDDIKSTDKMAFVMGNEGNGVRDETIAMSDASLYIPID 219 Query: 321 GNVAGLNISVATGVLLG 337 + LN+ VA G+++ Sbjct: 220 -TMESLNVGVAAGIVMY 235 >UniRef50_C0EHG6 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C0EHG6_9CLOT Length = 259 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 95/249 (38%), Gaps = 4/249 (1%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK 152 + + +R + + G +S + + ++ ++ L M A Sbjct: 14 AKLSGSKKQRDASGLFCLEGVRLIADAVRSG-VTLEKILITENCLQKYNHELAEMLAING 72 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLG 212 + + K S + GV + KK + T + G C LAL + +P N+G Sbjct: 73 KMNTISGELAGKLSDVKSPQGVFAIAKKLDKTLDTDTIKSGG---CYLALCSTQDPGNIG 129 Query: 213 GMMRSCAHFGVKGVVVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 M+R+ G+ GV++ + + S +R+ G ++ +++ + G Sbjct: 130 TMIRTADALGIDGVLLHNTCDIYSPKVVRSTMGSLFRMRFALCPDLLGLTASLNACGVDT 189 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 E P+ + S VL +G E GLPD+ R+ I GN LN + A Sbjct: 190 CAAVVEDALPVTRASFSGPRVLYIGNEGNGLPDSIAFACARRITIPMRGNAESLNAASAA 249 Query: 333 GVLLGEWWR 341 +L+ E + Sbjct: 250 AILMWEMTK 258 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 64/332 (19%), Positives = 113/332 (34%), Gaps = 10/332 (3%) Query: 21 DDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDET 80 + + N R+G GR SR GR A S R K G + Sbjct: 3 RNQRSTSKNTRSGGAAGRGASSRGASGRGGATGRGGSAGRGSKKAADWGGYFGSKNGKGS 62 Query: 81 PEKADHGG------ISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAW--F 132 G G+ ++ + G A Sbjct: 63 KGGRSAQGVRAVQGTRGQRGAGAGRPGNKKPATDLIEGRRAVAEALTVGIPLKNALVQAA 122 Query: 133 IQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ 192 + R + V L S H GV + + + + + Sbjct: 123 SGQKDQEIEALARQLEQEGIPVERVARPVLDSLSSHGAHQGVIVRTQPFAYADLSEIIQR 182 Query: 193 AG-AQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHV 250 AG A V+ L++ ++ N G ++RS G GVV+ + A A +T+ G H+ Sbjct: 183 AGSANALVVVLDHVTDEGNFGAIVRSAEVVGAAGVVIANARAARVGVGAYKTSAGAVLHL 242 Query: 251 QPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDP 310 N+ L++ + AG+ ++ + +++ + ++ LV+G E G+ + Sbjct: 243 PIAQVSNLPRALEELKAAGFWTCGSTEHATQSVWEAPMGGRLALVMGSEGSGISRLMLEK 302 Query: 311 NDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 D K+ G V LN++ AT V+ EW R+ Sbjct: 303 CDFTCKLPQFGQVESLNVAQATTVMCYEWLRR 334 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 12/320 (3%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 N R+ K P K RR + + K ED + + ++ + Sbjct: 7 NRRSVKKKKGPLKGTGGHSRRALKPKGPTP----KAEDRVYHAAHKRKVEKEIAEKKKAQ 62 Query: 89 ISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMA 148 + A + G NA + + I ++ R + +R Sbjct: 63 AEAHRTRTSIKIA---AGNELIVGRNAVFEAVDAGIDIIRVFLAGNALDERIGKVVRTAT 119 Query: 149 ANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ---DCVLALENE 205 A V + +L ASG H + + + + + Q + + ++AL+ Sbjct: 120 ALGAPVLEVTKMDLENASGESAHQSIGIEVPEYDYCSAQDLLERTKENAQIPLIVALDQV 179 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 ++PHNLG ++RS FG+ GV++ + + + AA + + G A V N+V L + Sbjct: 180 TDPHNLGAVLRSGGAFGITGVLISERRSASVNAAAWKVSAGAAARVPVARETNLVRALGE 239 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 ++AG VV L L +V+V G E +GL R+ D V I + V Sbjct: 240 LKEAGCFVVGLDGGGDVSLRDLDLATGPLVVVTGAEGKGLSRLVRETCDQIVSIPISSAV 299 Query: 324 AGLNISVATGVLLGEWWRQN 343 LN +VATG+ L E + Sbjct: 300 ESLNAAVATGIALYEVASKR 319 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 92/266 (34%), Gaps = 8/266 (3%) Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV--TP 138 + + R++ + T + G + E IV +F Sbjct: 5 KITSTQNDSVKHVIKLRDRRPREKEQLTVLEGYRELTRAREYGME-IVEVFFAPEHFLGQ 63 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 L A+ V L K + E G+ + K + T + V Sbjct: 64 NEFPLLETFASEGVKVCQVAPFLLEKMAYRERPEGLIAIAKMKRHTLAEMPV---RPNGL 120 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKG-VVVQDAALLESGAAIRTAEGGAEHVQPITGDN 257 L E P NLG M+RS GV G ++ + + IR + G V +N Sbjct: 121 YLVAEAVEKPGNLGSMLRSADAAGVDGFIICNKCTDIYNPNVIRASTGALFSVPLAEAEN 180 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 D ++ + + + + + +V+G E GL + + +DL V+I Sbjct: 181 -QEAYDWLKKNNIRTLAATPHTDQIYTDVDMTQAVAIVVGTEQTGLTELWMEHSDLPVRI 239 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQN 343 G + LN++ AT +LL E RQ Sbjct: 240 PMLGKIDSLNVATATTILLYEAARQR 265 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 8/242 (3%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVD--EAELTKAS 166 +YG +A +L ++ + + + + + + + +D + + Sbjct: 4 LIYGIHAVDSLVEANQAKEILVFKKSNANHKIESIIAKAESKGLKVTFIDSFKQLPGRVR 63 Query: 167 GTEHHGGVCFL----IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 +H + + K + ++ + Q +L L+N +PHN G +RS G Sbjct: 64 KDANHQNIFAIEINDFKTYSENDIENLIPQ-DKNAFILILDNVQDPHNFGACIRSAHSAG 122 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 + +++ D + + + A G AEH + + N+ ++ +Q G ++ + E Sbjct: 123 IDFIIIPKDNSAPVNATVKKVACGAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAGEAND 182 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L+ +L + +V G E G+ + D K+ G V+ LN+SVATG+ L E R Sbjct: 183 SLYSMNLADSVAIVAGAEGSGMRQRTKASCDFLAKLPMLGEVSSLNVSVATGIALYETVR 242 Query: 342 QN 343 Q Sbjct: 243 QR 244 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 249 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 113/293 (38%), Gaps = 13/293 (4%) Query: 60 RDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQAL 119 +++K + ++A G K+ RR R E ++G + Sbjct: 2 KNKKTNQAGSGVQAKADRGAPRRDNKSAGQDKKAATQD---RRIRFSEDLIWGIHPIVEA 58 Query: 120 FQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTK-ASGTEHHGGVCFL 177 + P I + +F E + A + +D L + + H GV Sbjct: 59 LKYEPNRISEIIAQKDRRGAKFDEIVELARAAKVKVTFIDSISLQGDGAASARHQGVIAK 118 Query: 178 IKKRNGTTVQQWVSQ------AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-D 230 + + + ++ + G + ++ ++ +PHNLG ++RS G GV++ + Sbjct: 119 VTQADLMDFADFLQKFKDAVDRGEKPRIIVCDSLQDPHNLGAIVRSALASGAIGVLLTRE 178 Query: 231 AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-GKPLFKTSLP 289 + G A +++ G H+ N+V L + ++ G V + LF L Sbjct: 179 RSAPLGGTAAKSSAGAISHMDICQVTNLVKSLAELKKVGAWVFGAIKDADAVSLFDADLN 238 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 +V+G E G+ R D+++ I G + LN SVA V+L E RQ Sbjct: 239 VPACIVVGSEGTGIRPLVRRECDIQLSIPMVGELDSLNSSVAAAVILFEAMRQ 291 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 101/241 (41%), Gaps = 7/241 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 ++G ++ F++ E I + + + + T + + +R V +L + + Sbjct: 6 MIFGLHSISEAFEAGKE-IDKIFIRRGLKTEQTEAIIREAVERCVPVMHVPIEKLDRLTS 64 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 ++H GV ++ T + Q + + G +L L+ ++ N G + R+ GV Sbjct: 65 -KNHQGVVAILSAIEYTRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECAGVD 123 Query: 225 GVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 +++ + ++ G AI+T+ G + +I + ++ G +V S + Sbjct: 124 AIIIPERGSVSVGGDAIKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAASEKAADLY 183 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + + +V+G E G D V I G + LN+SVA G+++ E RQ Sbjct: 184 TDVPMKLPLGIVMGAEDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVVRQQ 243 Query: 344 K 344 + Sbjct: 244 R 244 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 4/234 (1%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G + Q L ++R + + + + A V E+ Sbjct: 9 GIHTVQQLLADG--HVLRLYVADNKKSKNLTALVGEAQARGVPVETVALYEIEMMLPGVR 66 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD 230 H GV + + R + +L L++ +PHNLG +RS A GV V++ + Sbjct: 67 HQGVAAVSEARGQAADWADAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLIPN 126 Query: 231 -AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 A + + A G E + N+ ++ ++ G VV + + L+ T L Sbjct: 127 SRAADVTPVVEKVACGATEILPLFRVSNLRREVERMQRQGIWVVGGAGGAAQSLYATDLT 186 Query: 290 AKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + +++G E EG+ R+ D V+I + LN+SVA GV+L E RQ Sbjct: 187 VPLAVIVGNEGEGIRHGLREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQR 240 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 53/263 (20%), Positives = 105/263 (39%), Gaps = 8/263 (3%) Query: 88 GISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM 147 K + R +A + G ++ AI R + ++ T +R + Sbjct: 4 RKFKKPGGFRQHAPRPKASSLVI-GRQPIVEAMKAGK-AIERIFMLRGATGEIIPQIRQL 61 Query: 148 AAN-RKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALE 203 A ++V +L + +H G + N +Q +S + G L L+ Sbjct: 62 AEQYNIPINLVPVEKLNGLTS-ANHQGCVAITGNINYLDLQDVISHVTEQGQTPLFLILD 120 Query: 204 NESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVL 262 ++ N+G + RS G + +++ D + AI+++ G E + ++++ + Sbjct: 121 GITDVRNIGAIARSAVCCGAQAIIIPDRGIAALNEEAIKSSAGALETISVCRVNSLLKAI 180 Query: 263 DDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 D G V+ + E L+ L + +++G E +G+ A +D I GN Sbjct: 181 DTLHLNGIKVIASEMEAETKLYDCQLQEPVAVIMGSEDKGVFPALIKASDTLFHIPMAGN 240 Query: 323 VAGLNISVATGVLLGEWWRQNKA 345 N+SVA G++L E +Q A Sbjct: 241 FESFNVSVAAGIILYEAMKQRGA 263 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 103/293 (35%), Gaps = 12/293 (4%) Query: 62 RKWEDSPWRTVSRAPGDETPEKADHG--GISGKSFIDPEVLRRQRAEE-----TRVYGEN 114 + +P A G + D + +R R + G Sbjct: 3 DNRKRTPRGGKQAASGSRPIRRYDRAAAPKGQRDRTQAARPQRNRDNVQAPKGEFIEGRR 62 Query: 115 ACQALFQSRPEAIVRAWFIQ--SVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHG 172 A ++ + A + + + A V A+L S H Sbjct: 63 AAAEALRTG-FPVKCALIAEGGERDAALSRLVDDLNAAGVRIKYVPRAQLDALSSHGAHQ 121 Query: 173 GVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNLGGMMRSCAHFGVKGVVVQD- 230 G+ + V + +AG V+ L++ ++ N G ++RS G GV++ + Sbjct: 122 GIALEVGNFPYADVADILDRAGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAAGVIIANK 181 Query: 231 AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA 290 A + + +T+ G H+ NI LDD + AG+ V S + Sbjct: 182 RAAGVTVGSYKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVSGASERAEGSCWDAPFEG 241 Query: 291 KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++ LV+G E +G+ + D K+ G LN++ AT L EW R+N Sbjct: 242 RVALVMGSEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATTALCFEWLRRN 294 >UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selenomonas RepID=C4V3B4_9FIRM Length = 276 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 102/266 (38%), Gaps = 6/266 (2%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP--RF 140 A++ I + + R + V G + QS + + R Sbjct: 9 SAENPLIRRLAMLIRSPRRAVKENVFFVEGLRLAEMAVQSNWAILHAV-VTEHAMKMERM 67 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 + L ++A V E + S T+ G+ L+++ T +++ V L Sbjct: 68 QLLLTKLSARNIPIASVSERLFSACSETDSPQGIILLLQRLPCTPLEEMVQVTEGLPLYL 127 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIV 259 AL+ +P N+G ++R+ G GV+ ++ A + +R A G ++ +TG + Sbjct: 128 ALDRVQDPGNVGTILRTADAAGASGVILLRGCADVYGSKVVRAAMGSLFYLPFVTGVDEE 187 Query: 260 NVLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 +++ ++ + + G F L ++VLG E G+ + + + Sbjct: 188 DLVRFAKENVLCFYAAACDTDGVTHFAAELSRPSLVVLGNEANGVSERLLR-AGQHLYVP 246 Query: 319 GTGNVAGLNISVATGVLLGEWWRQNK 344 G LN++ A +L E RQ K Sbjct: 247 MCGRAESLNVAAAATAILYEAIRQRK 272 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 7/244 (2%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELTKA 165 +YG NA + ++R R + +R +D EL + Sbjct: 3 DLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELDRR 62 Query: 166 SGTEHHGGVCFLIKKRNGTTVQQ---WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 +H GV + + G +L L++ +P N+G ++R+ G Sbjct: 63 LRDANHQGVALECSDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEVVG 122 Query: 223 VKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT-SSEQG 280 V GVV+ + A + T+ G EH++ N+ ++ + AG VV E+ Sbjct: 123 VHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDERA 182 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + L + LVLG E GL R+ D V++ G +A LN++VA ++L W Sbjct: 183 YEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYHAW 242 Query: 341 RQNK 344 R + Sbjct: 243 RVRE 246 >UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacillus RepID=Q1G9C5_LACDA Length = 260 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 100/261 (38%), Gaps = 6/261 (2%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + + + R+ + + G + + ++ ++ R Sbjct: 4 RTSVNNPQIKAIGKLQQKKYREESGYYLIEGFHLVEEALKAS-VKYREILATEAALSRLA 62 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 + +A + + ++ + S T++ + +K + + A + + Sbjct: 63 QL--GLAYDEGKLIKISQSVASHLSSTKNSQDIFMTVKINMTVKINRPKHFAFSYGKWVL 120 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L++ ++P N+G ++R+ G GV++ + L + R+ +G H+ I ++ + Sbjct: 121 LDDLADPGNVGTIIRTADAAGFDGVILSNKTVDLYNPKVQRSMQGSQFHLNLIKA-DLPD 179 Query: 261 VLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 + + A V + + K L + A++ L++G E G+ D ++ I Sbjct: 180 AIASLKAADIPVYASLLDPAAKQLGDFAPVAQVALIIGNEAHGVSPEIEALADEKLYIPI 239 Query: 320 TGNVAGLNISVATGVLLGEWW 340 G LN +VA G+++ + Sbjct: 240 KGRAESLNAAVAAGIMIYHFS 260 >UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Actinomycetales RepID=D1A1M0_THECD Length = 289 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 82/265 (30%), Gaps = 9/265 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + + R R G A + P + + R E + Sbjct: 10 RSPRVKSARRLAKRTFRHRERRFLAEGPQAVREAL-GLPGVLTELFTTAEAESRHAELVT 68 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 V + + + T G+ + + + + V L + Sbjct: 69 AAERAGVPVLRVSGEVMAELAQTVTPQGLLGVCTFVDVSLADAL---SPPPTLVTVLAHV 125 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N G ++R+ G VV D + +G +R + G HV + G ++ Sbjct: 126 RDPGNAGTVLRTADAAGCDAVVFTDASVDPYNGKCVRASAGSLFHVPVVAGTRFETLIGA 185 Query: 265 FRQAGYTVVTTSSEQGKPLFKTS----LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 R+ G TV+ L L V G E GLP+ D V++ Sbjct: 186 LRECGLTVLAADGAGEHTLDAALDGGLLDRPTAWVFGNEAWGLPEEILRAVDHVVRVPIY 245 Query: 321 GNVAGLNISVATGVLLGEWWRQNKA 345 G LN++ A V L R +A Sbjct: 246 GRAESLNLATAAAVCLYASARAQRA 270 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 3/251 (1%) Query: 94 FIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA 153 E+ R + +G N + E++ R W + V F+ + +A R A Sbjct: 22 RPGRELSRDESDGLLLCWGRNPSLEQLERSGESVERVWLARGVEAEFEAQVVRLA-GRTA 80 Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLG 212 VD L + +G H G+ +++ + ++ + Q AG V+ L+ +PHNLG Sbjct: 81 LERVDRLALDQMTGGAVHQGIALSLRRPDEVSLDDLLDQLAGGPALVILLDRCQDPHNLG 140 Query: 213 GMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYT 271 ++R+ G V+V D ++ +G ++ + G A I+ N+ LDD ++AG+ Sbjct: 141 SVIRTAEAAGASAVLVPKDRSVRLTGTVVKASAGAALRFPVISVVNVKRALDDLKEAGFW 200 Query: 272 VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVA 331 VV + E +PL K + + VL +G E GL + R D +I +G LN VA Sbjct: 201 VVGLAGESSEPLGKLAWDQRTVLAVGAEGTGLAELTRKSCDFLARIPMSGQAESLNAGVA 260 Query: 332 TGVLLGEWWRQ 342 + EW R+ Sbjct: 261 AALGAYEWARR 271 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 9/250 (3%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R E + G + C + Q+ + E R V E Sbjct: 5 RNHEECMWICGRHVCISALQNPNRVCRELLVTGEFLKKHPEVARMAQNKGIRPRRVAAEE 64 Query: 162 LTKA--SGTEHHGGVCFLIKKR-----NGTTVQQWVSQAG-AQDCVLALENESNPHNLGG 213 + K G H G+ + K + V+ VS + V+ L+ ++ +N+G Sbjct: 65 IGKIWGHGRTVHQGIALRVGKLFGRDGDKLRVEDIVSGSAFTASTVVLLDQVTDINNVGA 124 Query: 214 MMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++RS A F V V++ + E+ R + G A+ V + N+V ++ +Q GY Sbjct: 125 IVRSAACFDVDAVILPEHHSPSENCIITRVSSGAADLVPVVRVGNLVKTMEYLKQNGYWC 184 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + K L + S + ++LG E +G+ R+ D VKI + + LN+S A Sbjct: 185 YGMDVDGDKALHEISFCERRAIILGSEGKGIRRLTREHCDHLVKIPMSARINSLNVSNAA 244 Query: 333 GVLLGEWWRQ 342 ++L + Q Sbjct: 245 AIVLYSSYLQ 254 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 86/259 (33%), Gaps = 8/259 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + ++ QR + G + + S + + + + K L Sbjct: 5 QSPENPLIKEIKKIKETQRRKIFF-EGVHLVETSLVSDYVFTEKVFVTEKFIEKQKNFLE 63 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + + ++ E S T GV + + ++ + Sbjct: 64 ILQEKKIPVIIISEKVAKTISDTVTPQGVFAIAD-FKIKNINDL----SNPTFIVIADRI 118 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N+G ++R+ FG + V+V S A+R + G + I + + + Sbjct: 119 QDPGNIGTIIRAAEAFGAEAVLVTHGTCNPFSNKALRASAGSIFFLPVIKVT-VKEIEEF 177 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 + G +V T + F + +V G E +G+ R KI G Sbjct: 178 VSKYGLNLVITDLKATISSFNMDFTKPLAIVFGNESKGVSQDLRAIKHTSCKIPHKGKAE 237 Query: 325 GLNISVATGVLLGEWWRQN 343 LN+++A +L E RQ Sbjct: 238 SLNVAMAATAILYEILRQR 256 >UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casseliflavus RepID=C9A4E5_ENTCA Length = 259 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 14/258 (5%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ + + R + + G + Q + I Sbjct: 10 IQSKKNTFIKEIKKLTQKKHRTQTNSYLIDGWHLVQEALHA-QVPIKALLVTPRGLSEAN 68 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 L +++ E S G+ +++K+ +Q L Sbjct: 69 GQLDDYQEES---YLITEEIAAMLSDLPTPQGIFAVVEKQEQ-DLQTL------TGNWLI 118 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+N +P N+G M+R+ G GV + A L S +R+ +G H+ + G I Sbjct: 119 LDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLYSTKVLRSMQGSNYHLPIVEGA-IPP 177 Query: 261 VLDDFRQAGYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L + AG + T ++ P + +LG E +G+ D + I Sbjct: 178 FLKQLQAAGVAIYGTELNKEAVPYTELPKGQAAAFILGNEGQGVNQELLALTDKNLYIPI 237 Query: 320 TGNVAGLNISVATGVLLG 337 G LN+++A G+L+ Sbjct: 238 YGQAESLNVAIAAGILMY 255 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 48/250 (19%), Positives = 102/250 (40%), Gaps = 11/250 (4%) Query: 102 RQRAEET-RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA 160 R + +YG++AC + ++ + + ++ + V+ A Sbjct: 3 RIKDNRYLWIYGKHACLSALKNPNRVCIELLITHKFIDKNDPVIKLAKNRKIGIRDVEIA 62 Query: 161 ELTKASGTEH-HGGVCFLIKKR------NGTTVQQWVSQAGAQDC--VLALENESNPHNL 211 ++ G++ H G+ + + ++ V+Q A +L L+ ++ HN+ Sbjct: 63 KIDSLVGSKAIHQGMLLKVLPLFGRNASSLIRIEDIVAQTEAAPTSTILVLDEVTDVHNV 122 Query: 212 GGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G ++R+ A F V VV+ + ES + + G + V + N+V L+ +Q Y Sbjct: 123 GAVLRTAACFNVDAVVLTEHNSPSESCGMAKASSGAIDIVPVVCIGNLVKTLEYLKQKNY 182 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 + G L + + V++LG E +G+ + D VKI + + LN+S Sbjct: 183 WCYGFDASGGTCLHQVEFSERRVVILGAEGKGMRHLTKKHCDHLVKIPMSEKMESLNVSN 242 Query: 331 ATGVLLGEWW 340 A + + + Sbjct: 243 AAAIAMYSVF 252 >UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E768_MACCJ Length = 246 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 95/257 (36%), Gaps = 19/257 (7%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + R++ ++ + GE+ + S + + + + + Sbjct: 8 QNQKIKQIAKLHNRKDRKKMQQFIIEGEHLVEEAVNSNID--IEMILTVNPDRLTEAMVA 65 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + + K S TE G+ + ++G + + V+ L+ Sbjct: 66 GSKQQ----YEITFKVAEKLSQTEAPQGIYAVCNMKDGKDAEL--------NRVIYLDRI 113 Query: 206 SNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N+G ++R+ G+ V++ + + + +R ++G H+ I + + Sbjct: 114 QDPGNVGTIIRTADAAGLDAVIIAKGTVDIYNDKVLRASQGSVFHIPVIEM----DFDEV 169 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 + T+ TS E+ + + ++VLG E +G+ D + I G Sbjct: 170 SSKFNGTIYGTSLEEARDYKEVIPSDNFMIVLGNEGQGVNPEILSATDENLYIPIYGRAE 229 Query: 325 GLNISVATGVLLGEWWR 341 LN++V G+L+ + + Sbjct: 230 SLNVAVCAGILMYHFVK 246 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 7/242 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA---YHVVDEAELTKA 165 +YG + A + + + +S A++ A +++ EL K Sbjct: 10 LIYGLHPVAAAWINPERRCRGLYVTESALAALDGAVQRAAELGLERPDPTFLEKEELDKL 69 Query: 166 SG-TEHHGGVCFLIKKRNGTTVQQ--WVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 H GV V+ +++ Q V+ L+ ++PHN+G +MRS A FG Sbjct: 70 LPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAAFG 129 Query: 223 VKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGK 281 + V+VQD +G +TA G + V + N+ LD +QAG+ V + Sbjct: 130 ARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESGAR 189 Query: 282 PLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 PL + L + LVLG E EGL + D ++ G V LN+S A V L E R Sbjct: 190 PLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEVAR 249 Query: 342 QN 343 + Sbjct: 250 RR 251 >UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPX8_9FIRM Length = 271 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 95/267 (35%), Gaps = 6/267 (2%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + R + R+ G + + S + + V Sbjct: 3 IDSASNKKIKLMESLRLRKHRAKEGLFRIEGVRLSEMVAASGWAIRFGLYTAELVEKERG 62 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRN---GTTVQQWVSQAGAQDC 198 AL + + + A K + T+ G+ + +++ + A + Sbjct: 63 RALVEALQAKCPLYEIGAALAKKVAATDTPQGIFLVAEQQKKSLPQMAEHLQQAAARKPL 122 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDN 257 ++ L+ +P N G ++R+ G GV++ + + S +R G H+ +T + Sbjct: 123 LVVLDGVQDPGNAGTIIRTADAVGADGVILTKGSVDVFSDKTVRATMGSLFHLPVVTDVS 182 Query: 258 IVNVLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 V + AG ++ T+ + Q KP F ++ G E G+ + +V Sbjct: 183 AEEVATFAQAAGCQLLATALDEQAKPHFAVDFGKGSLIAFGNEGGGVSEELLAAA-EKVY 241 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQN 343 I G LN+ V++ V+L E RQ Sbjct: 242 IPMYGEAESLNVGVSSAVVLYEAVRQR 268 >UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1I377_VITVI Length = 569 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 123/348 (35%), Gaps = 49/348 (14%) Query: 16 YVRSDDDSDKRT---HNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTV 72 Y+ D+ +++ +PR K R D R R + + + W W+ Sbjct: 229 YMERDESAEEEMEVIDDPRWDKIKNRY-TETGDVKGRYERPELRRWNKQENWGRKTWKEA 287 Query: 73 SRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWF 132 + + I G+ +YG A + + Sbjct: 288 TEST---------IPKIVGEG----------------IYGVGPVLAALSAGRREFYALYV 322 Query: 133 IQSVT-----------PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKR 181 + + F++ L+ + + + +L H G+ Sbjct: 323 QEGLDLSGNNRKKKDKKGFEKVLKLAEKIGLSIKDLSKHDLNMVVDNRPHQGLVLDASPL 382 Query: 182 NGTTVQQW---VSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESG 237 +++ +++ +AL+ ++P NLG ++RS FGV GVV+ + SG Sbjct: 383 EMVKIKELDPVLTEGEKGPLWVALDEVTDPQNLGAIIRSAYFFGVSGVVLCAKNSAPLSG 442 Query: 238 AAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTS-SEQGKPLFKTSLPAKMVLVL 296 + + G E ++ N++ L + G+ V+ S S + PL + S A +LVL Sbjct: 443 VVSKASAGSLELMELRFCKNMMQFLTSSAENGWQVLGGSVSPRAIPLNEISPGAPTILVL 502 Query: 297 GQEYEGLPDAARDPNDLRVKIDG----TGNVAGLNISVATGVLLGEWW 340 G E GL ++I G V LN+SVA GVLL Sbjct: 503 GSEGTGLRPLVERSCTQLIRIPGNIPSFLAVESLNVSVAAGVLLHHLV 550 >UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5GSE7_WOLTR Length = 258 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 41/241 (17%), Positives = 107/241 (44%), Gaps = 5/241 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWM-AANRKAYHVVDEAELT 163 + +YG++ C +++ + ++ +++ +R + +V L+ Sbjct: 7 NKNFWLYGKHTCMLALKNKNRLCIELLVTENSYREYEKEIRQCVDSKGIKVQLVKNKILS 66 Query: 164 K-ASGTEHHGGVCFLIKK-RNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + S + +H G+ + + ++++ + ++ L+ ++ HN+G ++R+ A F Sbjct: 67 EVLSKSANHQGIALKVAPILHSLSIKEIAESSSDSSTIVILDQVTDTHNIGSILRTSACF 126 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 V +V+ + + E+ + + A G + V I N+V ++ ++ GY S Sbjct: 127 NVDALVLPYNHSPSENASIAKAASGTLDIVPLIHVTNVVKTMEYLKKVGYWCYGFDSNAK 186 Query: 281 KPLFKTS-LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + + + K+V++ G E +G+ ++ D +KI + + LN+S A + L Sbjct: 187 ENIDEIKSFGKKIVIIFGSEGKGMRRLVKENCDYLLKIPMSNVIDSLNVSNAAAIGLYSV 246 Query: 340 W 340 + Sbjct: 247 Y 247 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 10/241 (4%) Query: 112 GENACQALFQSRPEAIVRAWFIQSV----TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 G +A +AL + RPEA++ + + PR ++ A L K +G Sbjct: 9 GFHAVEALLRHRPEAVLELFVQDTRADRDDPRLAALMQAAKDFGIAIQRARREVLEKHAG 68 Query: 168 TEHHGGVCFLIKKRNGTT---VQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 ++ G+ + R + QW+ A+ +L LEN ++PHNLG +RS GV+ Sbjct: 69 PQN-QGIVARARPRRPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQ 127 Query: 225 GVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-GKP 282 V+V A + A RTA G AE + N+ ++LD R G VV T+ E+ + Sbjct: 128 AVIVPRRNAAGLTPVACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSES 187 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 LF P + +V+G E GL RD D ++I G V LN+SVATGV+L + Q Sbjct: 188 LFTFQAPESLAVVMGAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVMLFQVRAQ 247 Query: 343 N 343 Sbjct: 248 R 248 >UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_3644c n=102 Tax=Actinobacteridae RepID=Y3644_MYCBP Length = 322 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 70/306 (22%), Positives = 111/306 (36%), Gaps = 7/306 (2%) Query: 39 PGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPE 98 PG SR G R + K + P H + ++ P Sbjct: 2 PGNSRRRGAVRKSGTKKGAGVGSGGQRRRGLEGRGPTPPAHLRP---HHPAAKRARAQPR 58 Query: 99 VLRRQRAEETRVYGENACQALFQSR-PEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVV 157 ++ E V G N ++ P + R E + A + A + Sbjct: 59 RPVKRADETETVLGRNPVLECLRAGVPATALYVALGTEADERLTECVARAADSGIAIVEL 118 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD--CVLALENESNPHNLGGMM 215 A+L + + H G+ + N ++ A Q ++AL+N S+P NLG ++ Sbjct: 119 LRADLDRMTANHLHQGIALQVPPYNYAHPDDLLAAALDQPPALLVALDNLSDPRNLGAIV 178 Query: 216 RSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVT 274 RS A FG GV++ + + A RT+ G A + N+ L + G V+ Sbjct: 179 RSVAAFGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIG 238 Query: 275 TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + G L +V+V+G E +GL R D V I LN SVA GV Sbjct: 239 LDAGGGTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNASVAAGV 298 Query: 335 LLGEWW 340 +L Sbjct: 299 VLAAIA 304 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 44/241 (18%), Positives = 102/241 (42%), Gaps = 7/241 (2%) Query: 106 EETRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEALRWMAANRKAYHVVDEAELT 163 V+G +A + ++R +++ + + + ++A++ N +D + Sbjct: 4 NLDIVFGVHAVTEVIKNRKRRVIQLYVLDNKAGHRGIEDAIKAAKRNNIKIDRMDVKTMD 63 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHF 221 + +H G+ ++ + + + +D +A++ ++P NLG ++RS A Sbjct: 64 ALTKKGNHQGIAARVEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACL 123 Query: 222 GVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQG 280 G +++ + + + + A G E V + N+ L D + G+ + G Sbjct: 124 GFSTIILPSRRTVGLTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYGADM-GG 182 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT-GNVAGLNISVATGVLLGEW 339 + + KT VLV+G E G+ + + D V I G+V LN + A +++ + Sbjct: 183 QSIVKTDYSFPAVLVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMFDM 242 Query: 340 W 340 + Sbjct: 243 F 243 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 72/240 (30%), Positives = 98/240 (40%), Gaps = 6/240 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKASG 167 VYG++A + P + W R + L + V L + + Sbjct: 25 LVYGQHAAREAAAYDPAGVEAVWVEHGRRDARLERLLDKLGRQGVTVERVHRRVLDQMAE 84 Query: 168 TEHHGGVCFL---IKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 +H G+ R + V +L L+ +PHNLG MRS A G Sbjct: 85 GGNHQGIVLRYSGTPARGEGELADLVDAEPE-PLLLVLDRVQDPHNLGACMRSAAAAGAH 143 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 GVV D A S A +TA G + + N+ L R AG VV + E K Sbjct: 144 GVVAPRDRAAALSPAVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAAGEAEKSC 203 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 ++ L + LVLG E EGL R+ D RV I G++ LN+SVA GVLL E RQ Sbjct: 204 YEVDLRGPLALVLGGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQR 263 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 4/237 (1%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASG 167 + G +A + ++R + T + + A + V + Sbjct: 5 WIGGIHALRQALNDGN--LLRLEVSEGKTSKNLASLVADAKAAQIEIITVPRHYIDHRLP 62 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H G+ + + Q + +L L++ +PHNLG +R+ GV VV Sbjct: 63 DVRHQGIAGECRLSAQASNWQQAISGVERPFILVLDSIQDPHNLGACLRTAMAAGVDAVV 122 Query: 228 VQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + A + + A G AE + N+ ++ ++ G VV + E K LF Sbjct: 123 LPNSCAADITPVVRKIACGAAEALAIFRVANLKREVEMMKEKGLWVVGGAGEAEKSLFDL 182 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L +V+++G E +G+ R D I + LN+SVA G++L E RQ Sbjct: 183 DLSGGLVMIVGNEEKGIHYGLRQTCDWLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 7/237 (2%) Query: 112 GENACQALFQSRPEAIVRAWFIQSVTPR-FKEALRWMAANRKAYHVVDEAELTKASGTEH 170 G N + ++ + + + + E + V+ A L K +G H Sbjct: 7 GRNQVREALRAG-RPLNKILLAPHLEGQAIGEIINLARERGVPLQRVNRAALEKLAG-HH 64 Query: 171 HGGVCFLIKKRNGTTVQQWVSQAGA---QDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H GV L R ++ +++AG ++ L+ +PHNLG ++RS G GV+ Sbjct: 65 HQGVVALAAAREYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAVGAHGVI 124 Query: 228 VQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + + + A R A G E+V N+ L++ + G + + + G+ F Sbjct: 125 IPRRRGVGLTAAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAAGDAGQEAFNA 184 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +VLVLG E GL R D V + G + LN++ A VL+ E RQ Sbjct: 185 DFTVPLVLVLGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVLRQR 241 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 108/241 (44%), Gaps = 6/241 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG N +SR + + R A R A +D EL + Sbjct: 4 LIYGVNPVLEALKSRQRKPLELLVLHGAESSRLSAVCEAARARRVAIRSLDRRELDALAE 63 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H GV ++ ++ ++ + AG + +L L+ ++PHNLG + RS G + Sbjct: 64 GARHQGVALRLESQSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAVGCQ 123 Query: 225 GVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSE-QGKP 282 G+V+ D + + AA + + G ++ N+ L+ F+QAG+ V + + + Sbjct: 124 GIVLPKDRSCPITAAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAGSQS 183 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 L+ T L +VLV+G E +GL D R D + I G V+ LN SVA GV L E RQ Sbjct: 184 LYDTDLRGNVVLVVGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEVLRQ 243 Query: 343 N 343 Sbjct: 244 Q 244 >UniRef50_A9B181 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Chloroflexi (class) RepID=A9B181_HERA2 Length = 262 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 89/266 (33%), Gaps = 15/266 (5%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT--PRF 140 + + + R V G +++ + + + R Sbjct: 8 STANHHVKYLRSLLRSRKDRHSERRFVVEGVRLVGEALNFATPSLL-LYVPEQLASTERG 66 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 ++ L +A A L S E G+ +I T+ + +L Sbjct: 67 QQLLDLIAQL-PNAFATTPAILAGLSDVETPQGIIAVIPMPQFTS--------QSASLIL 117 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIV 259 L+ +P N+G ++RS GV V+ + A + S +R+ G + + G N Sbjct: 118 MLDGVQDPGNVGTLLRSAEAAGVGQVLCLPGTADVWSPKVVRSGMGVHFRLPIVDGLNWE 177 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 L + + + L VL++G E G+ + + I Sbjct: 178 TALP-LIEHCQQRFAAVQDSPLSYDQADLTQPTVLIIGNEANGVSATTLSYS-STITIPM 235 Query: 320 TGNVAGLNISVATGVLLGEWWRQNKA 345 G++ LN +VA VLL E RQ + Sbjct: 236 LGSLESLNAAVAGSVLLFEAARQRRV 261 >UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococcaceae RepID=Q8DNE3_STRR6 Length = 252 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 48/263 (18%), Positives = 105/263 (39%), Gaps = 20/263 (7%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 T + + + + R+ A + G + + Q+ I + + +++ + Sbjct: 8 TIITSKANSVVKNAKKLHQKKYRKSA--YLIEGWHLFEEAVQAG-VTIEKIFALENYRDQ 64 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 + + + E L + ++ G+ +++K ++ +Q Sbjct: 65 LAAFPQTV--------WISEDILLDLADSQTPQGIVAVVQK------EEVGQADLSQGKF 110 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNI 258 L LE+ +P N+G ++R+ G GV+V D A + S +R+ +G H+ + Sbjct: 111 LFLEDVQDPGNVGTIIRTADAAGFTGVIVSDKSADIYSLKTLRSMQGSHFHLPIYRMTS- 169 Query: 259 VNVLDDFRQAGYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 +LD+ ++ V+ T+ + + VLV+G E +G+ + D V I Sbjct: 170 PALLDETKKVAIPVLATTLSKDSVDYRELPSIENFVLVMGNEGQGISPLMAESADQLVHI 229 Query: 318 DGTGNVAGLNISVATGVLLGEWW 340 G LN++VA G+L+ Sbjct: 230 SMKGQAESLNVAVAAGILIFHLS 252 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 86/237 (36%), Gaps = 18/237 (7%) Query: 103 QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAEL 162 R + G + + Q + + ++ + R + + +V L Sbjct: 22 HRQHSYLIEGWHLFEEA-QQSGQGFRHIFVLEELAERVADQEK--------VVLVSADVL 72 Query: 163 TKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFG 222 + + + G+ + + Q L LE+ +P NLG ++R+ G Sbjct: 73 KELTDSPSPQGIIAEVDMPQLAFPTDY------QGKYLILEDVQDPGNLGTIIRTADAAG 126 Query: 223 VKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-G 280 GV + +A + + +R+ +G H+ +I + + ++ V+ T+ + Sbjct: 127 FDGVFLSEKSADVYNSKTLRSMQGSHFHLPIWR-TDIYKICREMQEHNTPVLATTLSKVS 185 Query: 281 KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 LV+G E +G+ D V I G LN++VA G+L+ Sbjct: 186 VDYKTVPHQESFALVMGNEGQGISAEMTTLADQLVHITMPGQAESLNVAVAAGILIF 242 >UniRef50_B0MRI6 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRI6_9FIRM Length = 262 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 101/266 (37%), Gaps = 9/266 (3%) Query: 82 EKADHGGISGKSFIDPE-VLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF 140 + + E R++ G +S A++ + ++ Sbjct: 3 ITSKQNTYIKEYRKLTEQRKYRRQTGYFVCEGAKLAVEAVKSGCALGENAYYTAAAAEKY 62 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 E + + + K + E S T+ G+ ++ + + + + Sbjct: 63 PECISLLRESCKMVQ-ISEEVADSISDTKSPQGIFITVRHLDKILNLSTIDSSRQ---FI 118 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIV 259 LEN + N+G ++RSC F + GV++ D A + + +R+A G + + Sbjct: 119 ILENLQDMGNIGTIIRSCDAFSIDGVILAGDCADVFAPKTVRSAMGSLFRLPIY-CCDTE 177 Query: 260 NVLDDFRQAGYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + ++ G+TV + ++ L + LP K +V+G E G+ D + D + I Sbjct: 178 EAITLLQKGGFTVYSAELSDRSVRLGEEKLPQKTAVVIGNEGNGVSDTVKKLCDKSLFIP 237 Query: 319 GTGNVAGLNISVATGVLLGEWWRQNK 344 + + LN SVA V+ E + + Sbjct: 238 IS-SAESLNASVAASVIAWEMSKVRE 262 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 110/257 (42%), Gaps = 22/257 (8%) Query: 109 RVYGENACQALFQSRPEAIVR---------AWFIQSVTPRFKEALRWMAANRKAYHVVDE 159 + G +A + ++ I + ++ + PR K+ L D Sbjct: 4 IITGFHAIDEILRAEKLKIEKEKNRKPSLEIFYSKE-GPRVKKILEAARKLNLKIEKKDN 62 Query: 160 AELTKASGT-----EHHGGVCFLIK---KRNGTTVQQWVSQAGAQD--CVLALENESNPH 209 L + T H G+ + + ++ G +V ++ ++ + V+ L++ ++PH Sbjct: 63 QFLDSLTKTLPEQLRDHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTDPH 122 Query: 210 NLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA 268 N G ++RS FG+ G++V + + + + G V + N+V ++ ++ Sbjct: 123 NTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNLVRTVERLKKE 182 Query: 269 GYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNI 328 G+ + + GK L + P K VL++G E G+ + D V I G + LN+ Sbjct: 183 GFWIYGADA-GGKALPNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSLNV 241 Query: 329 SVATGVLLGEWWRQNKA 345 SVA G+LL E R+ + Sbjct: 242 SVAAGILLYEISRKKEV 258 >UniRef50_B9Y9V6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM Length = 244 Score = 243 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 51/248 (20%), Positives = 103/248 (41%), Gaps = 22/248 (8%) Query: 95 IDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAY 154 + R + + V GE+ ++ A+ + T F K Sbjct: 16 KLQQKKYRDQTGKFLVEGEHLIGEALKAG--AVEQLLIEAGRTNPF--------EREKEA 65 Query: 155 HVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 V E+ + K S + + ++ A A + L+ +P N+G + Sbjct: 66 IVCGESVMRKLSANVSGAWLIAVCTQKTT---------APAGLRTVVLDGVQDPGNVGTI 116 Query: 215 MRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ FG V++ D A + + +R+ +G H+ ++ L++ ++ G TV+ Sbjct: 117 IRTAVAFGFDQVLLSPDCADVYNEKCVRSTQGALFHIAISR-TELIPALNELKELGVTVI 175 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 T+ + +PL + + + +VLG E +G+ A D D R I+ + + LN++VA G Sbjct: 176 GTALQGAQPLSELPVSENIAVVLGNEGQGIRPATLDICDQRALIEMS-SFESLNVAVAAG 234 Query: 334 VLLGEWWR 341 + L + R Sbjct: 235 ICLYRYRR 242 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 117/326 (35%), Gaps = 26/326 (7%) Query: 40 GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEV 99 K G R+ + + K ED + A ++ + +D Sbjct: 4 KKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYFAKKAAIKRTFADPRLAARRRVDKLG 63 Query: 100 LRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQ--SVTPRFKEALRWMAANRKAYHVV 157 V G NA + + + R +E ++ Sbjct: 64 SDSDE----LVIGRNAALEALR-VGVPSTQLYVANRIEHDDRTREIVKLAGMQGLRLLEA 118 Query: 158 DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ-----------------DCVL 200 D E+ + + + +H G+ ++ ++Q+ V +A + + Sbjct: 119 DRLEMDRIAHSTNHQGIIVKVQPYQYHSLQELVERAEKKARAMEAADSDSARINARPLFI 178 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIV 259 AL+ ++P NLG ++RS A FG GV++ + + + AA + + G A H+ N+ Sbjct: 179 ALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLN 238 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + R+ G+ + K + +T +V+VLG E +G+ R+ D I Sbjct: 239 KAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIP 298 Query: 319 GTGNVAGLNISVATGVLLGEWWRQNK 344 + V LN SVA G+ L + Sbjct: 299 ISSAVESLNASVAAGISLYAVANARR 324 >UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=Q6MA83_PARUW Length = 265 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 93/264 (35%), Gaps = 8/264 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE--A 143 + + R ++ + G + E + + ++ E Sbjct: 2 QNPKVKQILHLRDRPERDISQTFLIEGYRELLRAADADWE-VNLLFICPALFLGMNEPTL 60 Query: 144 LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQ--DCVLA 201 + + + E K S + G+ I + T+ + + Sbjct: 61 IERLTSRGTELFYCSEKVFRKISYRDRPDGLLA-IAPQRHLTLDDLSLKTKKPMAPFFVV 119 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVN 260 E P NLG ++RS G+ G++V D + + +R + G V + + Sbjct: 120 AEAIEKPGNLGTILRSSDAVGIDGLIVCDRCTDIYNPNVVRASVGTLFTVPTVEARG-ED 178 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 +L + G ++ + K + L + + + +G E GL + ++V+I Sbjct: 179 ILLWLNKQGIDILAATPHAEKEFTQVDLTSPVAIAVGTEQLGLSERWMKQATMQVRIPMM 238 Query: 321 GNVAGLNISVATGVLLGEWWRQNK 344 G LN+++AT +LL E RQ + Sbjct: 239 GVADSLNVAMATTLLLYEVLRQRQ 262 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 94/293 (32%), Gaps = 31/293 (10%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQS--VT 137 + + + R A + G + + + + ++ + Sbjct: 4 EKISSLQNPRVKQLVKLRDRRPRDEAGVFLIEGFREIRRALE-KRVPLRELYYAPEWFLG 62 Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIK--KRNGTTVQQWVS---- 191 + A + ++ K + E G+ + KR + + V+ Sbjct: 63 ENEPALIAQAEAAGAQLFELTKSAFAKVAYRERPDGLLAVAPQWKRTLQDLDKIVAGSGG 122 Query: 192 --------------------QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQD- 230 +L +E P NLG ++RS G V+V D Sbjct: 123 PGRPGSTTPATTSAVGAGAPDLQRAPFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDP 182 Query: 231 AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA 290 + + +R + G V + ++ VL R G + T+ K L Sbjct: 183 VTDIFNPNVVRASTGVLFSVPLVVAES-APVLAWLRAQGVRTIATTPAAEKLYTDADLRG 241 Query: 291 KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + +V+G E GL + DL V+I G LN+++AT + L E RQ Sbjct: 242 PLAIVMGSEQYGLSEFWLKNCDLPVRIPMAGQADSLNVAMATIITLFEAVRQR 294 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 89/238 (37%), Gaps = 11/238 (4%) Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAE 161 R+ + + G + + ++ + + F Q + L + V + Sbjct: 24 REELNQYIIEGFHLVEEAVKANAD-VQWILFNQRGQQEWGTWL--AEQETEKLIFVSDEV 80 Query: 162 LTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHF 221 L S G+ ++ + L L+N +P N+G M+R+ Sbjct: 81 LNSLSELPTSQGILAIVTLETQQE-----QSLSFKGGWLLLDNIQDPGNVGTMIRTADAA 135 Query: 222 GVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQ 279 G+ GV++ + A + + +R+ +G H+ + + + V+ F++ G V T E Sbjct: 136 GLAGVILGKGTADIYNTKVLRSMQGSHYHLPVLQRE-LTEVVQAFKKQGLPVFGTELNEA 194 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 ++ L+LG E G+ + I G LN+++A GVL+ Sbjct: 195 AIAYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMKGQAESLNVAIAAGVLMF 252 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 13/238 (5%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSV-TPRFKEALRWMAANRKAYHVVDEAELTKAS 166 +V G N +S + + + ++ PR KE + + + L K + Sbjct: 1 MKVMGINGVMEALKSGK--VNKIFVLKDATNPRIKEIVALAKKKKIPVVYTPQ--LPKEA 56 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVSQ-AGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 GV I V + + +L L++ +P N+G +MRS FG G Sbjct: 57 R-----GVMAEISPIEYKEVDTIIDKCIREGSFILFLDSVEDPQNMGAIMRSAEFFGCAG 111 Query: 226 VVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF 284 VV+ + + + + G H+ +N+ N+L ++ G TVV + PL Sbjct: 112 VVIPKRRCVQVNETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLDGE-PLR 170 Query: 285 KTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 L + +V+G E +GL + D KI+G G + LN+SVA +++ E+ R+ Sbjct: 171 NVDLSPPLAIVVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Beijerinckiaceae RepID=B2IK44_BEII9 Length = 293 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 20/303 (6%) Query: 37 GRPGKSRADGGRRP-ARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFI 95 R S+ R P A+ + PR + WE G+ P + S + Sbjct: 2 SRMDSSKTHQSRGPTAKRSETKPPRSKPWEG---------QGESRPHRPKSAPASQEK-- 50 Query: 96 DPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYH 155 +P R+ + ++G +A + +S + + ++ + A A H Sbjct: 51 NPSPFRQSSPDVILLHGFHAVREALRSDQRTCLALYATEAAAEKLAP---DSKAAGLAPH 107 Query: 156 VVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 +V +L++ G++ H GV + + + +++G VL L+ ++PHN+G + Sbjct: 108 IVTAEDLSRRLGSQTVHQGVLLEARPLEPLDITEIPTRSG---VVLVLDQITDPHNVGAI 164 Query: 215 MRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ A F V +V + G + + A GG EHVQ + N+ L+ + Y V Sbjct: 165 VRTAAAFDVDAIVTTERHAPALGGVLAKAASGGLEHVQIVPVVNLARALETLGRLNYLRV 224 Query: 274 TTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATG 333 S + L + LVLG E GL R+ D ++D G + LN+S A Sbjct: 225 GLDSAAEADFTQLPLQRPIALVLGGEGTGLRRLTREKCDFLARLDMPGKIKSLNVSNACA 284 Query: 334 VLL 336 V+L Sbjct: 285 VVL 287 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 66/334 (19%), Positives = 126/334 (37%), Gaps = 32/334 (9%) Query: 22 DSDKRTHNPRTGKGGGRPGKSRADGG-RRPARDDKQSQPRDRKWEDSPWRTVSRAPGDET 80 S + ++P++ KG P KS + ++ + +PRD+ G Sbjct: 2 SSQRERNDPKSRKGPNGPKKSGSKAAFSGQSKPYAKDKPRDK--------------GGYA 47 Query: 81 PEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEA-IVRAWFIQSVTPR 139 P + + P+ R + ++G +A +A +++ +R + Sbjct: 48 PAQTARSQTQTHAQARPKPPVRVSEDG-WIWGLHAVEAALKNQSRLGPIRLYVTPDRQKA 106 Query: 140 FKEALRWMAANRKAYHVVDEAELTK-ASGTEHHGGVCFLIKKRNGTTVQQWVSQA--GAQ 196 ++ + + AE + H GV G + + A + Sbjct: 107 LEQV--APKRGDLHVRLTEMAEFSGFLPQGAVHQGVALNGPPLEGDDLNGLMEGALRQER 164 Query: 197 DCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLESGAAI-RTAEGGAEHVQPITG 255 ++ L+ ++P N+G ++R+CA FG G+++QD + +TA G + V Sbjct: 165 PVLVMLDQVTDPQNIGAILRTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMDRVPFARV 224 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPL---------FKTSLPAKMVLVLGQEYEGLPDA 306 N+ L+ + G+ + + E L + P +V+V+G E EGL Sbjct: 225 TNLSRALESLTENGFVSLGMAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSEGEGLRRL 284 Query: 307 ARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + D VKI G LN+S AT + L E Sbjct: 285 VAEHCDHLVKIPMPGGFESLNVSHATSIALYEAL 318 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 100/245 (40%), Gaps = 7/245 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE-ALRWMAANRKAYHVVDEAELT 163 E ++G A +S ++ R W ++ + E L + A+ V L Sbjct: 2 EETVTIFGIRAILEAIESGK-SLDRVWLLKGTQSKLFEQLLHVLRNKNIAFSFVPVERLD 60 Query: 164 KASGTEHHGGVCFLIKKRNGTTVQQWVS---QAGAQDCVLALENESNPHNLGGMMRSCAH 220 + S ++H G I + ++ + + + L+ ++ N G ++RS A Sbjct: 61 RFSS-KNHQGAVARIGALSTQDMEPLIESVLKEKENPVFVLLDGVTDTRNFGAILRSAAA 119 Query: 221 FGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ 279 GV V + + +G ++T+ GGA V ++ +V+ + + + + Sbjct: 120 TGVDAVFISSTGSAPLNGDVVKTSAGGAFKVPISKVQHLKDVVYYLKAHDIPTLGITEKS 179 Query: 280 GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 + L+ + L + LV G E G+ + D + K+ T V LN+SVA V+ E Sbjct: 180 TETLYDSDLKGPLALVFGAEDVGISNGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYET 239 Query: 340 WRQNK 344 RQ + Sbjct: 240 IRQRR 244 >UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class) RepID=A9WFI1_CHLAA Length = 261 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 53/258 (20%), Positives = 91/258 (35%), Gaps = 9/258 (3%) Query: 87 GGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR--FKEAL 144 + R + G Q + + E + Sbjct: 8 NPTIKALRALRQRKARDEQGRYLIEGIRPVAEAIQCGA-PLDMLVVAPELLNSSFAHELI 66 Query: 145 RWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALEN 204 AA V A + + ++ G+ + + + T + + A + L Sbjct: 67 DTYAAGGGKILTVSAAVFSSLADKDNPQGLAA-VGRIHYTPLPNL---SPAPVGWVVLVE 122 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 ++P NLG ++R+ G GV++ AA+R + G Q + ++L Sbjct: 123 VADPGNLGTILRTADGAGFSGVILVGATTDPFDPAAVRASMGALFSQQIAR-TSWPDLLT 181 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 RQ +V +S T+ P ++LVLG E GL D DL V+I G Sbjct: 182 WARQHRIALVGSSDRGASDYRATTYPRPLLLVLGSERHGLTDEQLAACDLVVRIPMRGRS 241 Query: 324 AGLNISVATGVLLGEWWR 341 LN++VA G+L+ E R Sbjct: 242 DSLNLAVAAGILMYEATR 259 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 3/237 (1%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 V G N + + + ++ +S R +E + A A L+ G Sbjct: 13 WVSGFNPVREVLLTGRVEVLEMIVARS-DQRVRELVELGALRGIAPRQETRDGLSALVGH 71 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQA-GAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 HH GV +++ ++ + + G ++ ++ L+ +P NLG M+RS G +GV+ Sbjct: 72 AHHQGVALRMREFPYAALEALLEKPTGEREPLVILDCLQDPQNLGAMLRSACFLGARGVI 131 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 V D + + IR A G ++ I +N+V L+ ++ G + ++ + ++ Sbjct: 132 VPRDRSARVTSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLDAQAAQTIYDA 191 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L + LV+G E +GL D V+I G + LN + + + L E R+ Sbjct: 192 DLTVPLGLVVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Y1_THEAS Length = 256 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 7/243 (2%) Query: 105 AEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTK 164 A + VYG N +L + + + + P + + A + VD L + Sbjct: 8 AGDDLVYGRNPVMSLLEGGGDCLKVLISRRRSDPVRERIVEICRARGIPFQEVDGKVLDR 67 Query: 165 ASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV-----LALENESNPHNLGGMMRSCA 219 GT H GV + ++ AGA D V L +++ +PHNLG M+R+ Sbjct: 68 MVGTSSHQGVVARVSPVGILKLEDLYRLAGASDPVAAFALLVVDHVEDPHNLGAMIRTAE 127 Query: 220 HFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQA-GYTVVTTSS 277 G V+ L +G ++ + G A V I N+ + ++ G V + Sbjct: 128 AAGFSAVLFPSRREALPTGVVVKASAGAALRVPLIMVGNVSQAIRRVKEDLGLWAVGLEA 187 Query: 278 EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + +F LP ++ LV+G E +GL A D + I G LN+SVA G+++ Sbjct: 188 QGRASVFDERLPPRIALVVGSEGKGLSRVASAACDDILMIPMMGASGSLNVSVAAGIVMY 247 Query: 338 EWW 340 +W+ Sbjct: 248 QWY 250 >UniRef50_C6VPS4 rRNA methylase n=8 Tax=Lactobacillales RepID=C6VPS4_LACPJ Length = 257 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 83/258 (32%), Gaps = 12/258 (4%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 R++ + + G + ++ AI + Sbjct: 10 QNAHVKAWKKLQTKKGRKQQGQYLLDGWHLVNEAVKAH-VAIQTLLITAKQLATEPDL-- 66 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + A + + S T GV L ++ + L L+N Sbjct: 67 ---THFPAVIEISDEVAKHISATVTPQGVFALATLP--AAIEDLSQLDLTRP-WLLLDNV 120 Query: 206 SNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P N+G M+R+ G GV + R +G H+Q I ++ ++D Sbjct: 121 QDPGNIGTMVRTADAAGFAGVAFGTGTVDIHQPKVERAMQGSQFHLQLI-STDLDKLVDQ 179 Query: 265 FRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 + G V + Q PA L++G E G+ D + I G Sbjct: 180 LQAQGSPVYGSELNPQAARYLDIDAPASFGLIMGNEGNGMSRELLARTDQNLYIPIKGQA 239 Query: 324 AGLNISVATGVLLGEWWR 341 LN++VA GVL+ +R Sbjct: 240 ESLNVAVAAGVLMFGLYR 257 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 61/355 (17%), Positives = 107/355 (30%), Gaps = 54/355 (15%) Query: 42 SRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLR 101 + G R + K + + R + ++ Sbjct: 1 MKKKGTGGHGRKRLAGKGPTPKASNRTYHQAYRDRIAAEKKATHTNAQRSRAAAKDHYRP 60 Query: 102 RQRAEETRVYGENACQALFQSRPEAIVRAWFIQS--VTPRFKEALRWMAANRKAYHVVDE 159 RA ++G N R + + P+ + + +A+ Sbjct: 61 HTRAGAELIFGRNPVSEA-AVAGVPFKRLFVASTIMKDPKLAKVVERASASGVPLRECSA 119 Query: 160 AELTKASGTEHHGGVCFLIKKRNGTTVQQWVS---------------------------- 191 A+L + + H G+ + V + Sbjct: 120 ADLDRLTEGGVHQGIAAELCAYQYLDVMELWDLAVARAEAAGCAASAGCAVVSPAVHEVP 179 Query: 192 ---------------------QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ- 229 ++AL+ ++PHNLG ++RS A FG GV++ Sbjct: 180 SGVLGETPKSDLAPHETVATKPPTHPPLLVALDQVTDPHNLGAVLRSAAAFGADGVIIPE 239 Query: 230 DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLP 289 A + AA + + G A V N+ L D ++AG V+ L L Sbjct: 240 HRAASVNAAAWKVSAGAAAIVPVAQATNLTRALQDLKRAGAFVIGLDGGGDVALPDLQLT 299 Query: 290 A-KMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 +V+V G E G+ RD D V I + LN +VATG+ L + + Sbjct: 300 DVPLVVVTGSEGRGISRLVRDTCDQIVSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (class) RepID=Q6AGD8_LEIXX Length = 277 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 91/268 (33%), Gaps = 11/268 (4%) Query: 86 HGGISGKSFI---DPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 S + + R + G A R E +V + + R ++ Sbjct: 12 DNPRSPRVRAVAKLTKRTARSETGLFLLEGPQAVAEALAFRSELLVELYATPTALERHQD 71 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 + AA V E L + T G + ++ + + + AG+ V L Sbjct: 72 IAQAAAAAGTQVEFVTEQVLGTIADTVTPQGFVAVARQFPTSVREIF---AGSPALVAIL 128 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 E +P N G ++R+ G VV+ L + +R+ G H+ G ++ V Sbjct: 129 EEVRDPGNAGTIIRAADSAGADAVVLTGRTVDLYNPKVVRSTTGSLFHIPVAVGADLPEV 188 Query: 262 LDDFRQAGYTVVTTSSEQGKPL---FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + R AG V+ L L V G E GLPD D V + Sbjct: 189 VSCARAAGLRVLAADIAGEDLLAARTAGQLARPTAWVFGNEARGLPDEWLGLVDRAVAVP 248 Query: 319 GTGNVAGLNISVATGVLLGE-WWRQNKA 345 G +N++ A V L E + Q A Sbjct: 249 IYGRAESMNLATAASVCLYESAFAQRSA 276 >UniRef50_Q7NN60 Gll0554 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NN60_GLOVI Length = 265 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 99/261 (37%), Gaps = 7/261 (2%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + + RQ V G + A + + ++ Sbjct: 6 QNPVIKQLRKLHAAKERQAQGLFLVEGTHPVAAAL-AGGWELEFVCATEAWVGEHPAMHT 64 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL-EN 204 ++ Y V A + + T H GV +++R W +L L E Sbjct: 65 ALSGRAGRYETVAPAVIEALADTVHPSGVVAAVRRRA----DAWRPLLERDVSLLVLGER 120 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 +P N+G ++RSCA G G+V+ D+ + +R + G P++ ++ + Sbjct: 121 LQDPGNVGTLVRSCAAVGADGLVLSADSVDPDHPKVLRASAGLWFRSPPLSVPDLTACVA 180 Query: 264 DFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 D + G V+ + G+ L++ L VLG E +GL + R RV I V Sbjct: 181 DLVRRGVQVLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGV 240 Query: 324 AGLNISVATGVLLGEWWRQNK 344 LN++V+ +LL E RQ + Sbjct: 241 ESLNVAVSGALLLFEAARQRR 261 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 46/238 (19%), Positives = 96/238 (40%), Gaps = 12/238 (5%) Query: 108 TRVYGENACQALFQSRPEAIVRA-WFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKAS 166 R+ G N ++ + I + ++ ++ + + Sbjct: 2 ERIIGINPVTEALLNKEKNIEKLEFYNGLKGETVQKLKDLASKRNIKIFYTGKKI----- 56 Query: 167 GTEHHGGVCFLIKKRNG-TTVQQWVSQAGAQD--CVLALENESNPHNLGGMMRSCAHFGV 223 ++ GV I + + + +D VL L+ +P N G ++RS F V Sbjct: 57 --DNSQGVAVYISNYDYYKDFDEAYEELAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKV 114 Query: 224 KGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKP 282 +++ + ++ + ++T+ G E+V N+ + ++ ++ Y V + E Sbjct: 115 DLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEASIN 174 Query: 283 LFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 + + K++LVLG E G+ R+ D +KI G + LN+SVA+G+LL Sbjct: 175 YNEENYSNKIILVLGNEGSGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILLSRIV 232 >UniRef50_Q04FE0 rRNA methylase n=2 Tax=Oenococcus oeni RepID=Q04FE0_OENOB Length = 255 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 39/245 (15%), Positives = 82/245 (33%), Gaps = 11/245 (4%) Query: 95 IDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAY 154 + R+++ + G + Q I + + + Sbjct: 17 SLQTLKGREKSGTYMLDGWHLVQEALNQAA-PIQAVIATEEQMDQH--LIDV--PQGVPA 71 Query: 155 HVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGM 214 V E + T G+ N + + L L+ +P N+G + Sbjct: 72 FQVSEEVARHIAKTNTPQGIFAQTSLPN----NSFDPKYVHNGSWLLLDRIQDPGNVGTL 127 Query: 215 MRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVV 273 +R+ G GV + +A + +R +G H++ + ++ + +D Y V Sbjct: 128 IRTADAAGFSGVALSKESADPFNPKVVRAMQGSQFHLKLVKEVDLNDWVDKLEANDYNVY 187 Query: 274 TTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 ++ E L+LG E +G+ + + I+ G LN++VA Sbjct: 188 GSTLSENSVDYKTVVPEKNFALILGNEGQGIDPEIQAKTSENLHINFLGKAESLNVAVAG 247 Query: 333 GVLLG 337 G+L+ Sbjct: 248 GILMF 252 >UniRef50_C5NX63 Putative tRNA/rRNA methyltransferase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX63_9BACL Length = 251 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 41/258 (15%), Positives = 94/258 (36%), Gaps = 17/258 (6%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + E ++ + G++ + ++ + +S Sbjct: 2 ITSASNKRIKDIQKLKENKNIKKYGRYLIEGKHLVEEALDAK--VVEEIIVSESF----- 54 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 E + + V ++ L S T G+ + + VL Sbjct: 55 EEYNIVDSFEGDLIKVTDSVLKSISDTITSQGIIAVCRIVKKEL------DINNYSKVLI 108 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +P NLG ++R+ F +++ + L IR+ +G H+ ++V Sbjct: 109 LDKIQDPGNLGTIIRTADAFNFDCIILGKGTTSLYGQKVIRSTQGSNFHIDCFDNIDLVE 168 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTS-LPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 ++D+ + + + TS + K + + + K+ +V G E G+ + + +KI Sbjct: 169 LIDEMHE--FNIFATSLKADKYIEQLDNITGKVAVVFGNEGAGVSEEILSKVNNLLKISM 226 Query: 320 TGNVAGLNISVATGVLLG 337 G LN+S+A G+++ Sbjct: 227 PGRAESLNVSIAAGIVMH 244 >UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=A8LF93_FRASN Length = 386 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 84/341 (24%), Positives = 130/341 (38%), Gaps = 13/341 (3%) Query: 5 MKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKW 64 ++GK G +R + +R G ++ GG+ D+ R Sbjct: 43 LQGK-GATPPAEMRPGHPAQRRA----AVSAAGTRAAAKRPGGQAADERDRPRAERGTGG 97 Query: 65 EDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRP 124 HGG G RR +E V G NA ++ Sbjct: 98 SAGAVGAGRSGGHSGHGGNGAHGGHGGAGAPGAYGSRRVETDE-LVVGRNAVVEALRAG- 155 Query: 125 EAIVRAWFIQSVT--PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRN 182 + + R +A R A + EL + GT H G+ + Sbjct: 156 VPATTLYIAGGLDFDERIADARRLAGRAGLAVVDIGRFELDRLCGTAPHQGLALSVPPFE 215 Query: 183 GTTVQQWVSQAGA--QDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAA 239 ++ A A V+AL+ ++P NLG ++RS A FG GVVV + A + AA Sbjct: 216 YAHPDDVLAAAQAAAPGLVVALDGVTDPRNLGAVVRSAAAFGASGVVVPERRAAGVTAAA 275 Query: 240 IRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQ 298 +T+ G A + N+ L F ++G VV +++ L + + +VLV+G Sbjct: 276 WKTSAGAAARLPVARAVNLTRTLRSFAESGLFVVGLAADGEVSLDELQVATDPLVLVIGS 335 Query: 299 EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 E +GL + DLRV+I G V LN VATG+ L E Sbjct: 336 EGKGLSRLVGECCDLRVRIPMAGQVESLNAGVATGIALSEI 376 >UniRef50_C6XSD9 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Sphingobacteriaceae RepID=C6XSD9_PEDHD Length = 249 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 87/250 (34%), Gaps = 15/250 (6%) Query: 94 FIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKA 153 + R+ + G + + S + +++ Sbjct: 11 KSLHQKKYRKENGIFIIEGIKSIEEFIHSN-YQVHSIYYLAQYQSLLPAL-----PANIK 64 Query: 154 YHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGG 213 V+ AEL K S + G+ L+ + L L+ +P N+G Sbjct: 65 LFEVNNAELDKISTLQTPQGILALVNIPEPPLFK---PATPKNLFSLVLDGVQDPGNMGT 121 Query: 214 MMRSCAHFGVKGVVVQDAAL-LESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++R+ FG K ++ + + + + ++ G V +++ +L + + V Sbjct: 122 IIRTADWFGFKNIICSNNCVEVYNPKTVQATMGSLSRVNIFY-EDLPGILTNVK---LPV 177 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 + K ++KT + +++LG E +G+ V I G LN++++ Sbjct: 178 FGAVLDG-KSIYKTDWGNEGLVILGNEGQGITPPVMKLITHPVTIPRIGGAESLNVAISA 236 Query: 333 GVLLGEWWRQ 342 +L + R Sbjct: 237 AILCADISRN 246 >UniRef50_C9RRQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRQ7_FIBSS Length = 415 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 58/342 (16%), Positives = 120/342 (35%), Gaps = 37/342 (10%) Query: 29 NPRTGKGGGRP-GKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKA--- 84 + R GRP + GG R RD + + D+ + P ++ + PE+ Sbjct: 74 DNRDENREGRPFNREERRGGGRFDRDRRPRRFGDKPFNRGPRGAMNAPVYRQRPEQKEAI 133 Query: 85 -----------------------DHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQ 121 + R+R + G + + L + Sbjct: 134 DENLDEAALEARAAQIEAVEDAGSTPPWFKRLIACTTEKGREREGKFLGEGVHVVEELVK 193 Query: 122 SRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKR 181 E ++ + ++ +E + + H + E ++ + S T G+ Sbjct: 194 HHRELVISVYVVEGFEN--EELIEAINEAEITLHTLTEDQMKRLSSTMTTQGIIAYCNIA 251 Query: 182 NGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAI 240 + V + ++ + ++ +P NLG + R+ F G+++ + + Sbjct: 252 SKKPVYE-----TSRSVLTLVDAVQDPGNLGTLFRTSLGFNSSGMILGRGTVSPFNPKVV 306 Query: 241 RTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPA--KMVLVLGQ 298 R + G V ++V+ ++ R GYT++ T + L + KM ++G Sbjct: 307 RGSSGTFLRVPFEFDVDLVDQINFLRSKGYTIIATDLHAKQSLREIPAHKLRKMAFLVGN 366 Query: 299 EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 E G + D VKI + + LN++VA G+L E Sbjct: 367 EGAGTNPYFIELADETVKIPMSSELESLNVAVAHGILSYEAA 408 >UniRef50_P74261 Uncharacterized tRNA/rRNA methyltransferase slr1673 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y1673_SYNY3 Length = 274 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 99/265 (37%), Gaps = 7/265 (2%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + + + + R++ + + G + + F + Sbjct: 11 ITSTQNPLVKQLRQLHQTKGRKQQGQLLLEGTHLLEVALAQGK-GFNHGCFTAMWQEKNP 69 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 + A ++V L K + T + GV + W S L Sbjct: 70 VLADRLMAQSVHSYLVSGEVLAKMASTVNPDGVVATLTMDQF-----WRSPPPHARLGLV 124 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 LE +P NLG ++R+ A GV+G+ + D S +R++ G + + ++ Sbjct: 125 LERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSPKVLRSSAGSSLLLPQQQLQSLPP 184 Query: 261 VLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGT 320 +L+ F G ++ T + + L++ +++ G E +GL + +V I Sbjct: 185 LLEKFHTQGLQLIATVPQATQTLWEIDFQRPTIVIFGSEGQGLSAPVLELTTHQVAIPQA 244 Query: 321 GNVAGLNISVATGVLLGEWWRQNKA 345 V LN+++A GV+L E RQ A Sbjct: 245 PQVESLNVAIAVGVMLYEARRQQWA 269 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 13/235 (5%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG+N+ ++ I + + + + + A K + E+ + Sbjct: 4 LIYGKNSVLDALKAN-FPIAKIYLQKGLVNK--------AITFKNIEYLSIQEMNQLVKN 54 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 +H G I + + VL L++ +PHN G ++R+ FG+K +++ Sbjct: 55 GNHQGYIAEIYNYQYYDLGTIFKD--KPNLVLMLDHIQDPHNFGAIIRNANGFGIKHIII 112 Query: 229 Q-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQ-GKPLFKT 286 + A + ++ + G ++ I ++ + L + ++ G+ + +++ + L KT Sbjct: 113 PKNRACEVTPTVLKISSGAFTEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKATKLHKT 172 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 L++G E G+ +D V I+ G V LN++ AT VLL E + Sbjct: 173 KFATPTCLIVGNEESGVSHTLIKHSDALVYIEQKGTVQSLNVASATAVLLYEATK 227 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 101/262 (38%), Gaps = 11/262 (4%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALF--QSRPEAIVRAWFIQSVTPRFKEA 143 + + + + R++ V G + L I + + + + EA Sbjct: 12 NAKVKNLVALQQKSSERRKQGLFVVEG---VRELIHCAHAGYEIENLFCCRDILDKNPEA 68 Query: 144 LRWMAANR-KAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 + + + V +A K + G+ +K +N T+ ++ L Sbjct: 69 WKLDSLIGQTTIYEVTQAVYEKMAYRGSTEGMMAEVKVKN-RTLADL--DLPESPLIVVL 125 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 E+ P NLG ++RS V+V + L + IR++ G V + + Sbjct: 126 ESVEKPGNLGAVLRSADASKADAVIVCNPLTDLFNPNLIRSSIGAIFTVPTVACSS-QAC 184 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 ++ ++ ++T + P + + + +V+G E GL DA R D ++I G Sbjct: 185 MNFLKERNIKILTAQLQDSAPYYDSDMRGGTAIVMGTESTGLTDAWRKAADAHIRIPMLG 244 Query: 322 NVAGLNISVATGVLLGEWWRQN 343 + LN+SV+ +L+ E RQ Sbjct: 245 QLDSLNVSVSAAILMFEAVRQR 266 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 60/254 (23%), Positives = 95/254 (37%), Gaps = 6/254 (2%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK 152 + R + T +YG NA + + W A A+ Sbjct: 5 APAPTREPRTLPDDVTILYGRNAVHEALR-GSREVQHIWATAHAVEEPWLAAVAHDASAV 63 Query: 153 AYHVV-DEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNL 211 +VV D + + SG+ H GVC + V + ++ ++AL+ +P NL Sbjct: 64 DVNVVADGGWIERRSGSPDHQGVCAQVAPFRYAYVDELLAV--EHPLIVALDEIQDPQNL 121 Query: 212 GGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G + R+ G G+V+ + + A + + G EH+ N+ + L D R G Sbjct: 122 GAIARTAECAGATGLVIPARRSADVTPAVCKASAGAVEHLPIARARNLADFLGDARGVGA 181 Query: 271 TVVTTSSEQGKPLFKTSLPAK-MVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNIS 329 V + G P +VLVLG E GL D + + G + LN+S Sbjct: 182 WVYGAEGDGGVPYTGVDYSGPGVVLVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVS 241 Query: 330 VATGVLLGEWWRQN 343 A LL E RQ Sbjct: 242 AAASALLYEIVRQR 255 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 99/294 (33%), Gaps = 10/294 (3%) Query: 51 ARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRV 110 +R+D+ S+ + E P G + I R + Sbjct: 2 SRNDEFSRSGGSRPEHRPEH---PKVGQVKEVTSLANPIVKDLRSLALKKFRDQQGVFLA 58 Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMA-ANRKAYHVVDEAELTKASGTE 169 G + + + E + A V E ++ + + Sbjct: 59 EGLKLVIDALEQDWRIKTLVFAKSGKGNKTVEQVAARTFAKGGLVLEVTEKVISAITRRD 118 Query: 170 HHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV- 228 + V + ++ + + D +AL+ +P NLG ++R+ G KGV++ Sbjct: 119 NPQMVAGVFEQ-QYHQLAGL--KPKGNDVYVALDRVRDPGNLGAVIRTADAVGAKGVILI 175 Query: 229 QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL 288 D S +R G V + L+ + VV T + Sbjct: 176 GDTTDPYSLETVRATMGSVFSVPLYRASE-ADFLNWRKGFSGLVVGTHLKGAVDYRTIPY 234 Query: 289 -PAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 ++L++G E +GLPD+ D +I G LN+++ATGV+L E R Sbjct: 235 ANKPVILIMGNEQQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRR 288 >UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR56_AZOPC Length = 274 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 87/267 (32%), Gaps = 7/267 (2%) Query: 79 ETPEKADHGGISGKSFIDP-EVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT 137 + H + R+ + + G + + + Sbjct: 9 SRIITSTHNPRIKNIQKLRIKAYERKSQKLFIIEGIREFNLSLVGN-YILDSVYICFELL 67 Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + + + V +A K + E+H G+ L K + +S Sbjct: 68 EKSNSSEIINIIPSNIIYEVSKAVFQKIACRENHQGILALAKPKLHLLADLNLSN---NP 124 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKG-VVVQDAALLESGAAIRTAEGGAEHVQPITGD 256 ++ LE+ P NLG ++R+ + ++ + + + +R++ G Sbjct: 125 LIIVLESIEKPGNLGAILRTAEAAKIDATIICNPSTDIYNPNVVRSSIGCLFSNPIAVAS 184 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 N L + + K + T + +V+G E GL + D R+K Sbjct: 185 N-EETLAYLKSKSVQIFAAELTAFKQYYNTDFTSASAIVIGAEVNGLTNFWLDNAHQRIK 243 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQN 343 I G + LN+SV+ ++ E RQ Sbjct: 244 IPMQGIIDSLNVSVSVAIITFEAIRQR 270 >UniRef50_B5YER6 23S rRNA methyltransferase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YER6_DICT6 Length = 266 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 11/265 (4%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRF 140 + + + + +R++ + V G Q + +I + +S+ + Sbjct: 4 ISSPSNEVIKEVIKLHDKNKRKKLNKCLVEGWRLIQDA-KENGISIEKLIISKSLWNKKR 62 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 +E L ++ ++V++ + K S E G+ + + + + VL Sbjct: 63 EEILEKFSS--CDLYIVEDNLMNKISLMETPPGIMGVFPLFLSPKWE--ILKNKDNKIVL 118 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIV 259 ++ +P NLG ++R GV ++ + + IR + G V D+ Sbjct: 119 YSDDIQDPGNLGTIIRVADGVGVDAFILSENTVDPYNYKVIRASTGSIFRVPIWISDD-K 177 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDA-ARDPNDLRVKID 318 ++ F+ + +V + K F+ + VL+LG E G+ D N + ++I Sbjct: 178 TFVEFFKD--WKIVIADPKGSKLYFEENFKESFVLILGNEAWGIKKEKYLDLNPILLRIP 235 Query: 319 GTGNVAGLNISVATGVLLGEWWRQN 343 V LN+SVA V L E RQ Sbjct: 236 LRKGVDSLNVSVAASVFLFEAQRQR 260 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 102/248 (41%), Gaps = 8/248 (3%) Query: 101 RRQRAEE--TRVYGENACQALFQSRPEAIVRAWFIQSVT--PRFKEALRWMAANRKAYHV 156 RR + +YG NA + R R + + R + V Sbjct: 2 RRLQPGRPSEYLYGRNAVAEALRGRRRH-RRLFVASGIETHGRIVALMEAARVRGIPVIV 60 Query: 157 VDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMR 216 + +EL + G+ +H GV + A VL L++ +P N+ ++R Sbjct: 61 IPRSELDRMVGSVNHQGVVLETSPYPYVDFATLLDPAPE-SIVLLLDHLQDPQNIATLLR 119 Query: 217 SCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTT 275 + GV+GVV+ + A + A + + G EH+Q N+ +D R+ GY +V Sbjct: 120 TAEAAGVRGVVLPERRAAGITPAVVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVAL 179 Query: 276 SSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV 334 + LF+ LP +VL++G E GL D++V I G + LN +VA + Sbjct: 180 EPGPNAQSLFRAPLPLPLVLLVGAEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSI 239 Query: 335 LLGEWWRQ 342 L E R+ Sbjct: 240 ALYEIVRR 247 >UniRef50_A8R7Q7 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R7Q7_9FIRM Length = 244 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 45/259 (17%), Positives = 92/259 (35%), Gaps = 21/259 (8%) Query: 84 ADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEA 143 + K E R V GE+ + +++ + + T Sbjct: 6 SKTNARVKKWAKYKEKKYRDSDRCFLVEGEHLLEEAIRAK--LLDCILVEEGHTYDTGAY 63 Query: 144 LRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALE 203 + V + K S + + + + V+ L+ Sbjct: 64 ---------PCYEVSSMIMRKLSDSVSGTWLIGVCHMPCPMDFVM-------GEKVILLD 107 Query: 204 NESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNVL 262 + +P N+G ++RS FG VV+ A + S IR+ +G H+Q I ++ ++ Sbjct: 108 DVQDPGNVGTILRSAYSFGFDTVVLSKHCADVYSDKVIRSTQGALFHMQVIR-TDLSQII 166 Query: 263 DDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGN 322 D ++ V+ T+ E + ++ L+ G E G+ D + I+ Sbjct: 167 DQLKEKKIPVIGTALENASAMSTIEAVDRVALLFGNEGNGVSKELLAKCDETMYIEMH-A 225 Query: 323 VAGLNISVATGVLLGEWWR 341 LN++VA G+ + ++ R Sbjct: 226 FESLNVAVAAGIAMYKFRR 244 >UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonadaceae RepID=Q3BPZ8_XANC5 Length = 390 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%) Query: 29 NPRTGKGGGRPGKSRADGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGG 88 +P + GR G+ DGG P+ + PW + Sbjct: 83 DPTMTQHDGRGGRPPRDGGSGPSHN--------------PWGRAAPRTPAPRSAAPRAPA 128 Query: 89 ISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMA 148 + P A E R+YG NA QA+F++RP+A+ + + ++ P+FK L W Sbjct: 129 QHTSAVTPPAAAASGNAREVRLYGINAVQAVFKARPQALRKLYLSEARIPQFKALLAWCV 188 Query: 149 ANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV-LALENESN 207 R Y VVDEA+L+K + + HH G+ + + +Q+W++ + L L+ N Sbjct: 189 TQRIGYRVVDEADLSKLAASAHHEGIVAEVLRVAPQPLQEWLAALPQGPVLALWLDGVGN 248 Query: 208 PHNLGGMMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFR 266 PHN G ++RS AHFGV G+++ + L SGAA R AEGGAE V + + + R Sbjct: 249 PHNFGAILRSSAHFGVAGLLLPAGSTLGLSGAAARVAEGGAEAVPLVQLPDTATAMAQLR 308 Query: 267 QAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGL 326 QAG+ + T + G+ +F +LP ++V V+G E EG+ A DL++ I G+G V L Sbjct: 309 QAGFAIAATLVDGGQDVFAAALPQRLVYVMGAESEGMDRAFARDCDLQLSIRGSGKVESL 368 Query: 327 NISVATGVL 335 N++ AT V Sbjct: 369 NVASATAVF 377 >UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Acetobacteraceae RepID=Q0BV71_GRABC Length = 441 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 85/337 (25%), Positives = 136/337 (40%), Gaps = 24/337 (7%) Query: 13 KVMY--VRSDDDSDKRTHNP-RTGKGGGRPGKSRADGGRRPA-RDDKQSQPRDRKWEDSP 68 + + R + +RT P R +GG RP R+ R A R D+ ++ R R Sbjct: 121 RPRFEAPREEQSFGERTERPTRHRQGGERPSGGRSFRPRDGANRSDEHAERRPRSDHSRS 180 Query: 69 WRTVSRAPGDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIV 128 T P E P ++ G++ P ++G +A +A ++ + Sbjct: 181 DTTAQAQPAAERPSRS-----GGRALQAP-------VGAVWLHGLHAVEAALRNPARRLR 228 Query: 129 RAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH-HGGVCFLIKKRNGTTVQ 187 R + E R + A + + GTE H G+ L K + Sbjct: 229 RLLLTEEAEATLAE--RLPPPWALVAERTERAHMDQLLGTESVHQGIALLADKLPSPPLG 286 Query: 188 QWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVVQDAALLE-SGAAIRTAEGG 246 + ++Q VL L+ S+P N+G ++RS A F V+VQD E SG + A G Sbjct: 287 EILAQ--RPGPVLVLDQVSDPRNVGAILRSAAAFQACCVIVQDRNAPEESGTMAKAASGA 344 Query: 247 AEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSL-PAKMVLVLGQEYEGLPD 305 + + + NI L + A VV +E PL +L ++ LV+G E +GL Sbjct: 345 LDRLPMLRVVNIARTLAALKAADLWVVGLDAEGA-PLSGPALGKRRVALVMGAEGDGLRR 403 Query: 306 AARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQ 342 R+ D V + + LN+SVAT + L E R Sbjct: 404 LTRESCDEIVSLAMAEGMESLNVSVATAIALYEISRN 440 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 85/265 (32%), Gaps = 16/265 (6%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 E + + + R+ G + + + + Sbjct: 2 EHITSRQNPLMVRIKKLGQSRALRREEGVFVCEGPKLIEEALKWGA-CVETILAAEG--- 57 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 K + + + V ++ L S E G+ + + T + Sbjct: 58 --KPLPQGLTGESRQVE-VPDSLLRAVSSVETPQGLLAVCRNPGLTPPDKL-----TGGR 109 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 L L+ +P NLG + R+ FG G+++ + A S IR G + + Sbjct: 110 YLVLDGVQDPGNLGTIWRTADAFGADGLLLVNGCADPWSPKTIRATMGACFRLP-AWETD 168 Query: 258 IVNVLDDFRQAGYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 + V A + T+ E + L + +V+G E G+ D A +K Sbjct: 169 LETVRALLDGADIPLYATALREDTVDVRDVDL-KRAAVVIGSEGRGISDEALALCRRTIK 227 Query: 317 IDGTGNVAGLNISVATGVLLGEWWR 341 I LN ++A GV+L E R Sbjct: 228 IPMRARCESLNAAMAAGVVLWEMCR 252 >UniRef50_Q038C4 rRNA methylase n=8 Tax=Lactobacillus RepID=Q038C4_LACC3 Length = 253 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 90/261 (34%), Gaps = 15/261 (5%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 + + ++ A + G + Q S + + + Sbjct: 4 ISSPKNDRIKTAKKLTVKKHQKDAGRYLLEGRHLVQEALASG-QTPYDIYATEKYVED-- 60 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 R + + + E+ S T+ G+ ++ +R + Q L Sbjct: 61 ---RALKPFYEKITQISESVSEHLSDTQTPQGIFAVMPRRAEQLPEPLSGQ------FLL 111 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+ +P N+G ++R+ G++ VV + A +R +G HV+ ++ ++ Sbjct: 112 LDAIQDPGNVGTLVRTADAAGIQTVVFGNGTADAFGPKVLRAMQGSQFHVRIVSAK-LMP 170 Query: 261 VLDDFRQAGYTVVTTSS-EQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 ++ + G V + E+ K + L++G E G+ D + I Sbjct: 171 IIKALHRGGIPVYGSELNEKAKSYHSIQPSERFALIVGNEGNGMDPVLLQNTDTNLYIPI 230 Query: 320 TGNVAGLNISVATGVLLGEWW 340 G LN++VA V++ Sbjct: 231 RGKAESLNVAVAAAVMMFHLV 251 >UniRef50_C9LL58 RNA methyltransferase, TrmH family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL58_9FIRM Length = 269 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 91/259 (35%), Gaps = 6/259 (2%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRF 140 + + + + R + + + G + + IV + Sbjct: 4 ITSKNNRWIRLAIRLKQKKYRDKNKMFLMEGLRNAEDVQNQEISDIVCLVQSERAENGSV 63 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 + + V+E + SGTE+ G+ L+K+ Q ++ G + Sbjct: 64 QHIFERGENLHWLFCEVEEPLMRLISGTENGQGIILLVKQPYVMDYPQLLN--GLHGKYV 121 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIV 259 L+ +P N+G ++R+ A G GV++ A S +R++ G + +I Sbjct: 122 LLDTVQDPGNVGAIIRTAAAAGCSGVLLTKGSADPYSEKVVRSSMGSILRLPIYHDLDI- 180 Query: 260 NVLDDFRQ-AGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 L + + + + TS + + V + G E G+ D D V I Sbjct: 181 EFLKEIKSFSKVPFIGTSLSASQNYRHAKFVTEGVFIFGNEGSGISPEILDLTDWNVFIP 240 Query: 319 GTGNVAGLNISVATGVLLG 337 G V LN+S ++L Sbjct: 241 MAGTVESLNVSSTAAIILF 259 >UniRef50_Q3ABT2 RNA methyltransferase, TrmH family protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABT2_CARHZ Length = 258 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 18/268 (6%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 + ++ + + R++ V GE L + + +S Sbjct: 3 KKISSPENSFYKELKKLYQDSAFRRKNGMFIVEGEKLVFELI-TDNWPLKYLVVSESYWQ 61 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 + + + V+ + K S G+ + ++ AG Sbjct: 62 A-----KKIDDDGVKIVVLTDQLFNKISELVTPPGILAVACMKS------LSWPAGKDGA 110 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPIT--G 255 L L+ +P N+G ++R+ FGV GV++ A + + IR + G A + Sbjct: 111 FLVLDGLQDPGNVGTLLRAAFGFGVSGVILLPPAVDIYNPKVIRASAGTAFKFPVLRMEA 170 Query: 256 DNIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRV 315 D + +++ + + SE G PL PAK + +G E +G+ + ++ Sbjct: 171 DELKDII--LK-NNIPLFLAESEGGIPLTAIDFPAKFFVAVGNEGQGISTTLKSLPHQKI 227 Query: 316 KIDGTGNVAGLNISVATGVLLGEWWRQN 343 I G + LN ++A G+++ EW + Sbjct: 228 SIPMPGKIESLNAALAGGIIIYEWAKNR 255 >UniRef50_C6NZV4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZV4_9PROT Length = 261 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 54/269 (20%), Positives = 92/269 (34%), Gaps = 17/269 (6%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 + D+ I R+ A +T + G + +A + + Sbjct: 5 KRITSRDNPFYKSLHRISSSARERREAGQTLLDGSHLLRAFLDNGGKPKHLLL--NEQAQ 62 Query: 139 RFKEALRWMAA-NRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + E + + A ++A + S + G+ LI + Sbjct: 63 QDAEIVALLDACVDVPQTQFEDALFAQLSELKTPNGLLALIDIPAAQV------EVAHSQ 116 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGD 256 L LE+ +P NLG ++RS A G V + A S +R GG + + Sbjct: 117 FALLLEDIQDPGNLGSILRSAAAAGCDAVFMSPGCADAWSPKVLRAGMGGHFALSILESA 176 Query: 257 NIVNVLDDFRQAGYT--VVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLR 314 +++ V G+T ++ S K L+ +L K+ +G E GL Sbjct: 177 DLLKV-----ATGFTGKILAASLHARKSLYDCNLRGKLAFAIGNEGAGLSPELLTAAQQH 231 Query: 315 VKIDGTGNVAGLNISVATGVLLGEWWRQN 343 I G + LN + AT V L E RQ Sbjct: 232 FIIPMQGKIESLNAAAATAVCLFEASRQR 260 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 50/232 (21%), Positives = 105/232 (45%), Gaps = 14/232 (6%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 V+G+N+ + I + + + L++ K +D L K + Sbjct: 4 IVFGKNSVLEAIEYE-FPIEEIYLQKGL---VNNNLKF-----KKVVYLDRNSLDKLTEN 54 Query: 169 EHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV 228 +H G +K + + VL L++ +P N G ++RS FG K +++ Sbjct: 55 GNHQGYAAKLKDFQYHDLGSIFKDGSDK--VLILDHIQDPQNFGAIIRSANVFGFKHIII 112 Query: 229 Q-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQGKPLFKT 286 D A + + ++T+ GG ++V+ I +++ + +++ + G+ + ++ +Q K L Sbjct: 113 PKDRACDVTPSVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQQAKKLNDA 172 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG-TGNVAGLNISVATGVLLG 337 K+ +++G E G+ +D + I+ +V LN+SVATG+LL Sbjct: 173 KFNEKIAIIVGNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLY 224 >UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2Z7_9CYAN Length = 269 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 90/251 (35%), Gaps = 11/251 (4%) Query: 104 RAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF-KEALRWMAANRKAYHVVDEAEL 162 R + VYG + I + + F E ++ + Sbjct: 10 RDKFITVYGRKPVLEALSNPDIIIDKLLIANNARGEFIDEIIKQARQRGVKVSRESPKYI 69 Query: 163 TKASGTEHH-GGVCFLIKKRNGTTVQQWVSQAGAQDC--------VLALENESNPHNLGG 213 T+ S H GV + + ++ + + LAL+ NP N+G Sbjct: 70 TRISRNGRHDQGVVVDVIPPAMEALSTYLERQQSHPPNQKPQTHKFLALDGVKNPSNVGM 129 Query: 214 MMRSCAHFGVKGVVVQDAALL-ESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTV 272 ++R+C G G+++ + I+ + G A + + + + + L RQA YT+ Sbjct: 130 IIRTCLAAGFDGIILPRKGCPDLNPLVIKASAGTAFYTRVLRCAELSDALQQLRQANYTI 189 Query: 273 VTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVAT 332 S L+ S V VLG E EG+ + D V I LN++ A Sbjct: 190 YGLSGTATSTLYNLSFSPFSVFVLGNETEGINRDHHNLIDTWVSIPIEFPAESLNVASAA 249 Query: 333 GVLLGEWWRQN 343 V+ E RQ+ Sbjct: 250 AVVCFELKRQH 260 >UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D323_WIGBR Length = 250 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 4/240 (1%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTP-RFKEALRWMAANRKAYHVVDEAELTKAS 166 +YG + + +++ I+ F++S +FK+ + VD+ L K + Sbjct: 3 EIIYGIHVIEEFIKNKSNKILCILFLKSRKDIKFKKLILISNEKNIKIKFVDKKFLNKIT 62 Query: 167 GTEHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 + H G+ IK + + L L+ +P NLG +RS FGV+ Sbjct: 63 NNKKHQGIVAYIKNSKILKEPFLLKMLENKKNYFFLILDGIMDPRNLGSCIRSAYIFGVQ 122 Query: 225 GVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 V++ ++ + S A + A G + + I N+V ++ ++ ++ TS + + Sbjct: 123 AVIIRKNRSAKISSAVKKVASGSLDLIPLIYVTNLVRTINLLKKYNIQIIGTSRKAQLDI 182 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 L + +V+G E G+ ++ D + I N LNISVATG+ + E R+N Sbjct: 183 CNKKLKQSIAVVMGSENLGISRLVKENCDNILNIPTVKNNLPLNISVATGICIFEIIRKN 242 >UniRef50_Q2JVF6 RNA methyltransferase, TrmH family n=2 Tax=Synechococcus RepID=Q2JVF6_SYNJA Length = 270 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 50/262 (19%), Positives = 90/262 (34%), Gaps = 9/262 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + R+ V G + + + + R L Sbjct: 10 KNPWIRQLRQLHRSKGRREQGAFLVEGSHLLEEAL-GVGWPLRAVCYTFDWAERHPRLLA 68 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + + + V + S TE GV + R + A L +E Sbjct: 69 SLPKHLRR-QAVSLEVMAALSTTESPEGVVAVAVSRQIAS-----PPPEALRLGLVVETL 122 Query: 206 SNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P NLG ++R A G G+ + D+ E+ +R + G P ++ + Sbjct: 123 QDPGNLGSLIRVVAATGADGLWLSADSVDPENPKVLRASAGQWFRRPPQVLSDLPAWIQS 182 Query: 265 FRQAGYTVVTTSSEQ-GKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNV 323 R+ G V+ + + L + +LG E GL ++ D +V+I V Sbjct: 183 CRRQGIQVLAATLAPLATCYWDHDLTRPTLFLLGNEGAGLQESTIQLADAQVRIPMAAGV 242 Query: 324 AGLNISVATGVLLGEWWRQNKA 345 LN+++ G+LL E RQ +A Sbjct: 243 ESLNVAMTGGLLLYEALRQQRA 264 >UniRef50_C7HA00 tRNA/rRNA methyltransferase n=3 Tax=Ruminococcaceae RepID=C7HA00_9FIRM Length = 259 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 101/265 (38%), Gaps = 14/265 (5%) Query: 79 ETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTP 138 E ++ I + R+ + G C L R A+ + ++ Sbjct: 2 EKITSRENAKIKYACRLASSGAFRRSEGKFLAEGRKLCPEL--CRGAALETLFCTEAALE 59 Query: 139 RFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 + E + ++V++ K + H GV + + T + +A Sbjct: 60 KCPELAGLPGEH----YLVEDHVADKLADVGTHQGVFGIFRTPVHT-----LDEAKTGGR 110 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 LALE +P N+G ++RS A FG GV++ D A + + +R + G A V + Sbjct: 111 YLALERVQDPGNVGTLLRSAAAFGFDGVLLSDGCASVFAPKTLRASMGAAVRVPVMEVGA 170 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTS--LPAKMVLVLGQEYEGLPDAARDPNDLRV 315 + + R T + + Q +PL P + +V+G E +GL + V Sbjct: 171 MPAAIAALRAKNITCLAAALYQSQPLSAARPGYPGGVCVVIGSEGQGLTEETIAACSGTV 230 Query: 316 KIDGTGNVAGLNISVATGVLLGEWW 340 +I T V LN +A +LL + Sbjct: 231 RIPMTDRVESLNAGIAGSILLWHFR 255 >UniRef50_C0VZD1 RNA methyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZD1_9ACTO Length = 282 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 81/245 (33%), Gaps = 15/245 (6%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 V G A + + + ++ + + R+ E ++ A + H V S Sbjct: 41 VLVEGPQAVREALRFCGKDLLDVYISEEAWERYPELVQEAKAATRWVHQVTNEVSKAIST 100 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV- 226 G+ ++K + + D ++ L +P N G M+R G V Sbjct: 101 D--SQGITAVVKDFRTDGLPKV-----DWDFIVVLAQTQDPGNAGTMIRIADAAGADAVF 153 Query: 227 VVQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK- 285 + + + S +R++ G H+ I + VL+ R G ++ LF Sbjct: 154 ICSGSVDVTSPKVVRSSAGSVFHLPSIVNVGLPEVLEWARARGMQLLGADGNGSVDLFDA 213 Query: 286 ------TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEW 339 L + G E G + V I G+ LN+S A V L Sbjct: 214 ADCMVDVDLAEPTAWIFGNEAHGFAQFDTSEIEHFVSIPLGGHAESLNVSAAAAVCLFAS 273 Query: 340 WRQNK 344 + + Sbjct: 274 AKARR 278 >UniRef50_B7C827 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C827_9FIRM Length = 244 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 104/258 (40%), Gaps = 24/258 (9%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFK 141 ++ + + + R + V GE+ + + + A+ + ++ + + Sbjct: 2 IQSINNKKIKEYAKLIQKKERDKTNLFLVEGEHMVKEAYNAN--ALQELFILEGIECPIQ 59 Query: 142 EALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLA 201 Y V + L K S + + + KK N V++ + +L Sbjct: 60 ----------FNYETVTQQVLNKLSNQNSNSKMIGVCKKLNLKPVKE--------ENILL 101 Query: 202 LENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVN 260 L+N +P N+G ++R+ FG+ + + A + + I++++G ++ I ++V Sbjct: 102 LDNVQDPGNVGTILRTAHSFGIDCIYMSKGCADIYNPKTIQSSQGALFYIPVIQ-TDLVE 160 Query: 261 VLDDFRQAGYTVVTTSSEQG-KPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 + ++ V T+ K L K +++G E +G+ D ++ VKI+ Sbjct: 161 EIKKLQERNIEVYATALHDKHKDLQDIKPSKKYAILVGNEGQGVRKELIDLSNHIVKIEM 220 Query: 320 TGNVAGLNISVATGVLLG 337 LN+++AT + + Sbjct: 221 E-TFESLNVAIATSICMY 237 >UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03G93_PEDPA Length = 255 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 94/260 (36%), Gaps = 12/260 (4%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 + + R++ ++ + G + + + E + Sbjct: 2 EKISSTKNSKVKEWVKLKTNNGRKKFKKFLLEGRHPVETALEQATEY-EFLIVQEDFD-- 58 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 E + + +V + S T H G+ + + W Sbjct: 59 LGELAEQV--DNDKLILVTKEVANHISDTVHDQGIFLI----GYINEEDWQFPDDLSGKW 112 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNI 258 L L+N +P N+G M+R+ G GVV D A + +R +G H+Q N+ Sbjct: 113 LVLDNVQDPGNIGTMVRTADAAGFTGVVFGDGTADFYNPKILRAMQGSQYHLQLKRL-NL 171 Query: 259 VNVLDDFRQAGYTVVTTSSE-QGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 + + + G + + + + K +P + L++G E G+ + + D+ + I Sbjct: 172 EKWIRNCKDQGSVIFGSILDENARDYRKIDVPDQFSLIMGNEGNGMSERLIEMTDMNLYI 231 Query: 318 DGTGNVAGLNISVATGVLLG 337 G+ LN++VA GVL+ Sbjct: 232 PIKGSAESLNVAVAAGVLMF 251 >UniRef50_B9DPU7 SpoU rRNA Methylase family protein n=62 Tax=Staphylococcus RepID=B9DPU7_STACT Length = 248 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 46/261 (17%), Positives = 96/261 (36%), Gaps = 17/261 (6%) Query: 80 TPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPR 139 + + + R ++ V G + +SR I + + ++ Sbjct: 2 EQITSAQNAKIKHANKLKKKKERDKSGLVLVEGTHLIDEAVKSR-LTIKQLFIVEPERFD 60 Query: 140 FKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCV 199 E + + ++ SGT G+ +I+K + + + Q V Sbjct: 61 I-ELIEAAEEQ----YQINFKVAEALSGTVTPQGIFAIIEKPDVSKQVEVAKQ------V 109 Query: 200 LALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNI 258 L L+ +P NLG ++R+ + +V+ +A +R ++G H+ I +I Sbjct: 110 LLLDRIQDPGNLGTLIRTADAAALDLIVMSPGSADPFQDKVLRASQGSVFHLPII-SQDI 168 Query: 259 VNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKID 318 + DF V T+ + + K L+LG E +G+ + R+ I Sbjct: 169 KEFVQDF---DGPVYGTALDNAINFNEVESQEKFGLLLGNEGQGVDPELLEYTTQRLTIP 225 Query: 319 GTGNVAGLNISVATGVLLGEW 339 G LN+++A +L+ + Sbjct: 226 MYGEAESLNVAIAGSILIYKL 246 >UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Bacteria RepID=Q6UCQ6_9PROT Length = 257 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 105/247 (42%), Gaps = 2/247 (0%) Query: 93 SFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRK 152 S ++ ++++ + +YG +A + +F + K ++ N Sbjct: 2 SKRSKKLPKKRQNSDYWIYGHHAVVGALMNENRVKYEVYFTSEAEKKLKNEIKLENINVI 61 Query: 153 AYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGA-QDCVLALENESNPHNL 211 + + G +H G+C ++K + +++ + + L+ +P N+ Sbjct: 62 SIKKTRDEIDLLLKGISNHQGICMRVEKLQTPKLSDFINNLNEERSIIFLLDQLDDPQNV 121 Query: 212 GGMMRSCAHFGVKGVVVQDA-ALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGY 270 G + RS F + G+++ + ++ E+ +TA + V I NI + + + +GY Sbjct: 122 GAIFRSALAFNIDGIILTNTNSVTENSFLAKTASSALDKVPFIKIQNISSCIKILKDSGY 181 Query: 271 TVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISV 330 + + + + +T+ P K+V +LG E +G+ D +KI + N+ LN+S Sbjct: 182 WIYGLDMKAERSITETTFPKKIVFILGSESKGMRKITDSLCDEGLKIKMSDNLESLNVSN 241 Query: 331 ATGVLLG 337 +++ Sbjct: 242 TAAIIMF 248 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 59/250 (23%), Positives = 91/250 (36%), Gaps = 19/250 (7%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPR------FKEALRWMAANRKAYHVVDEAEL 162 VYG + L R I + S R + + +L Sbjct: 6 LVYGVGPVEELLGRRAREIAVLYVNPSRRSRQRAGDPVAAVAEQARRRGVSVEELSREQL 65 Query: 163 TKAS---------GTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD-CVLALENESNPHNLG 212 G HH GV L+ ++ ++ + +AL++ ++PHNLG Sbjct: 66 DALVAGRGDAEDGGRVHHQGVVALVGAFEYAALEDLIAAPRQRPALFVALDSVTDPHNLG 125 Query: 213 GMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYT 271 ++RS G GV++ D A SG + + G E + N+ L+ +QA Sbjct: 126 AIVRSAHVLGADGVILPKDRAAQVSGVVTKVSAGATEQIAIAQVTNLARALEQLKQAEVW 185 Query: 272 VVT-TSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG-NVAGLNIS 329 + + E L + LVLG E GL D ++I G V LN+S Sbjct: 186 IAGLAAGEGATSLPAFDATGALCLVLGAEGTGLRPLVARTCDFLIEIPMLGAGVGSLNVS 245 Query: 330 VATGVLLGEW 339 VA GV L E Sbjct: 246 VAAGVALYEV 255 >UniRef50_A4G4T6 tRNA/rRNA methyltransferase SpoU-like n=3 Tax=Oxalobacteraceae RepID=A4G4T6_HERAR Length = 265 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 96/263 (36%), Gaps = 11/263 (4%) Query: 82 EKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV-TPRF 140 D+ + R++A T + G + C+A Q + ++ Sbjct: 7 SSRDNPLYKELKHLATSSQARRKAGRTLLDGIHLCEAYLQQVGLPPLCIASETALLNSEV 66 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 ++ + V+ +A S EH + F+I T Q+ + A + Sbjct: 67 TVIVQQCIHSHTQCIVLPDALFHALSQVEHGVDILFVIDTPELTEPQRLLQSA------V 120 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIV 259 L+ +P N G ++RS A G+K V S +R G ++ ++ Sbjct: 121 LLDRVQDPGNFGSIVRSAAAAGIKQVFCSAGTTFAWSPKVMRAGMGAHFLMEIFENVDLE 180 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 ++ A V+ TSS K L+ L + + G E +G+ + ++ I Sbjct: 181 ALIAR---ADIPVIATSSHAEKRLYDLDLTQPVAWLFGHEGQGVTEHLLALATHQITIPH 237 Query: 320 TGNVAGLNISVATGVLLGEWWRQ 342 G + LN++ ++ V E RQ Sbjct: 238 LGAIESLNVAASSAVCFFEQVRQ 260 >UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0619 Length = 262 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 101/266 (37%), Gaps = 13/266 (4%) Query: 78 DETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT 137 D+ + I + + RQ+ V G A L + I+ Q++ Sbjct: 3 DKNITSITNPIIKNVKELQSKKSTRQKESLFVVXGTRAVHDL--ANTMEILYFIATQNID 60 Query: 138 PRFKEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQD 197 + + V + T S T+ G+ ++K+RN ++ + Sbjct: 61 XSDYN-------PKTQWITVSDNVYTHISDTKTPQGLMAIVKQRN-KSLNDF--TIKQNG 110 Query: 198 CVLALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGD 256 L LE +P NLG ++R+ V + + D L S +R G + I Sbjct: 111 TYLILEGIKDPGNLGTIVRTAYGLFVDAIFLTKDCVELYSPKVVRATMGAISKIDIIRNY 170 Query: 257 NIVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVK 316 + + +D FR+ + T Q L+ T +V+G E G+ + R D +K Sbjct: 171 EMTSYVDFFRENKVKIYATDLYQSNNLYTTKFDGSSAIVIGNEATGISEYTRAQADSTIK 230 Query: 317 IDGTGNVAGLNISVATGVLLGEWWRQ 342 I N+ LN ++AT ++L E RQ Sbjct: 231 IPTRDNLESLNAAIATSIVLYEVARQ 256 >UniRef50_C8NJ74 rRNA methylase n=38 Tax=Actinomycetales RepID=C8NJ74_COREF Length = 272 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 51/260 (19%), Positives = 90/260 (34%), Gaps = 9/260 (3%) Query: 85 DHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEAL 144 I + + +R++ + GEN+ +A + + + +F+E + Sbjct: 12 RTPRIVNAAKLLKTA-QRKKTHQFLAEGENSVEAAIATGAAT--DLFVTEQAAEKFEEIV 68 Query: 145 RWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALEN 204 R H + + S T G+ L T + S++ V Sbjct: 69 RTAGYMNVYTHPITDRAAKSLSDTVTTTGIFALCNDVLWTVGKAVNSRSR---LVSVPVE 125 Query: 205 ESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLD 263 P N G ++R G VV + + +R + G HV NI +VL Sbjct: 126 TREPGNAGTLIRVADAVGADAVVFAGETVDPQGPKVVRASAGSLFHVPVARNVNIDDVLG 185 Query: 264 DFRQAGYTVVTTSSEQGKPLFKT--SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 R G ++ T+++ L L + G E GL + D RV+I G Sbjct: 186 QLRSQGLQILATAADGEVDLDDAGELLSRPTAWLFGNEAHGLGEELLAKADHRVRIPIRG 245 Query: 322 NVAGLNISVATGVLLGEWWR 341 LN++ A + L E + Sbjct: 246 RAESLNLATAASICLYESSK 265 >UniRef50_Q8Z0C3 rRNA methylase n=30 Tax=Cyanobacteria RepID=Q8Z0C3_ANASP Length = 273 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 8/258 (3%) Query: 86 HGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALR 145 + + R + + G + + + Sbjct: 19 QNSLVKQIRKLHSTKERHKQGLFLLEGTHLLEEACAMD-YPLEVVCCTPEWEANHTALWD 77 Query: 146 WMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENE 205 + Y +V E L + T GV K+ + Q VLALE Sbjct: 78 DACSRCDRYEIVSEEVLQAIATTVQPDGVVATAKRSEQQS------QVPFTGVVLALETI 131 Query: 206 SNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDD 264 +P NLG ++R+ A G G+++ QD+ L++ +R + G + +++ + Sbjct: 132 QDPGNLGTIIRTAAAAGASGLLLSQDSVDLDNPKVLRASAGQWFRLATAVSEDLKATVQL 191 Query: 265 FRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVA 324 +QAG VV T ++ +++LG E GL D VKI + V Sbjct: 192 CQQAGMQVVATLPTAKLTYWEIDWRKPSLILLGNEGAGLSPDLAAMADQEVKIPLSPGVE 251 Query: 325 GLNISVATGVLLGEWWRQ 342 LN+++ + ++L E RQ Sbjct: 252 SLNVAITSALMLYEVQRQ 269 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 10/235 (4%) Query: 111 YGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGTEH 170 +G+ A ++I + + + + E + + N+ Y +V+EA + + + Sbjct: 5 FGKKALLDAI-GNKQSISKVYLLS----KNYELINLINKNKITYEIVNEAWFKQFDHSLN 59 Query: 171 HGGVC--FLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGV 226 H + + K T+++ ++ + VL L+ +P N G ++R+ FGV + Sbjct: 60 HQNIAFKLVKKNFQKTSLESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDAI 119 Query: 227 VVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFK 285 + + + I+T+ G ++ I +N+ N + + + G+ V TS + +P K Sbjct: 120 IYKKHHQASINDLVIKTSMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLLKSQPYEK 179 Query: 286 TSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWW 340 K V ++G E +G+ D ++ID G+V LN+ VATG++L + Sbjct: 180 VDYANKTVFIVGNENKGVSPLILKNADQSIRIDMFGDVQSLNVGVATGIILAHYR 234 >UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A8F2F0_RICM5 Length = 256 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 95/231 (41%), Gaps = 7/231 (3%) Query: 108 TRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASG 167 +YG++ + + I + + K+ + ++Y +V+ L+K Sbjct: 27 YYMYGKHPVFSALNNPKRQIDNILCTREIFDTNKKLI-----GTRSYEIVNNDILSKLLE 81 Query: 168 TEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVV 227 H G+ I+ ++ + + L+ ++ N+G ++RS A F + ++ Sbjct: 82 NHTHQGIAAKIRPIFSYNLEDI-DITNPKCKIAILDQITDTQNIGAIIRSAAAFDINAII 140 Query: 228 VQ-DAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLFKT 286 + D + ESG + A G E + I N+ + ++ ++ G+ ++ + Sbjct: 141 LPQDNSPNESGGIAKAACGTLELIPIIKVTNLRSCMNYLKKHGFWIIGLTGSANDYFTDK 200 Query: 287 SLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 + K+VLV G E +G+ + D KI + V LN+S A ++ Sbjct: 201 LISDKIVLVFGSEDKGIRRLVAETCDYLAKIPISQRVESLNVSNAASIIFH 251 >UniRef50_D2NNP6 rRNA methylase n=2 Tax=Rothia mucilaginosa RepID=D2NNP6_9MICC Length = 344 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 86/286 (30%), Gaps = 37/286 (12%) Query: 95 IDPEVLRRQRAEETRVYGENACQALFQSR--PEAIVRAWFIQSVTPRFKEALRWMAA--- 149 R + + V G A + ++ + + ++ R ++ + Sbjct: 55 KLRTRAARTKKGQFLVEGPQAVREALKAHLQKPILDAVYVTEAAFDRHEDIAELLEQVYG 114 Query: 150 -------NRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 R VV + L + + G+ + + + W A + L Sbjct: 115 TPTPEEGRRVFMRVVTDEVLEAMADSVSPQGIIAVSFMVDASFSLLWGDGALNPKLIAVL 174 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNV 261 +P N G ++R G V+ + L + +R+ G HV I G + + Sbjct: 175 SRVQDPGNAGTILRVADAAGADLVITTKGSVDLYNPKTVRSTAGSLFHVPIIQGVQLEDF 234 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFK-----------------------TSLPAKMVLVLGQ 298 +D + G V+ L + L + + G Sbjct: 235 AEDVKSQGTAVLAADGYGAVNLQELSEYTAARRAGVEASAPSGVKGNFDLSKPTMWLFGN 294 Query: 299 EYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGE-WWRQN 343 E +GL + +RV + G+ LN+ A V L Q Sbjct: 295 EAQGLNAEEKAAATMRVAVPVYGSAESLNVGTAAAVCLYASAMAQR 340 >UniRef50_UPI000185C1B1 23s ribosomal rna methyltransferase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C1B1 Length = 276 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 52/271 (19%), Positives = 105/271 (38%), Gaps = 9/271 (3%) Query: 77 GDETPEKADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSV 136 ++ P +S + +R++A V G N+ A ++ EA+V + Sbjct: 7 FNDEPFTPRTPRVSA-AIQLHRAAKRKKAGRFLVEGFNSVDAAIRA--EAVVEIFVTAPA 63 Query: 137 TPRFKEALRWMAANRKA---YHVVDEAELTKASGTEHHGGVCFLIKKRNG-TTVQQWVSQ 192 +F E L + ++D++ S T G+ + T++++ + Sbjct: 64 AEQFCELLTGYLESGTQRKSVSLIDDSAARSLSETVTTTGLFAVCDTGAVSTSLEEAIEV 123 Query: 193 AGAQDCVLALENESNPHNLGGMMRSCAHFGVKGVVV-QDAALLESGAAIRTAEGGAEHVQ 251 C++ ++P N+G ++R G V++ D+ + A+R++ G H Sbjct: 124 GKQSGCLVIPVECNDPGNVGTIVRMTDALGAGAVILAGDSVDPLNSKAVRSSAGSVFHTP 183 Query: 252 PITGDNIVNVLDDFRQAGYTVVTTSSEQGKPLF-KTSLPAKMVLVLGQEYEGLPDAARDP 310 +I V++ R+AG+T + T+ + L + + G E GL + Sbjct: 184 VARERDIDVVVERVREAGFTTLATAMDGALTLGVDALPDGPVAWLFGNEAHGLSEEITAS 243 Query: 311 NDLRVKIDGTGNVAGLNISVATGVLLGEWWR 341 V I G LN++ A + L E R Sbjct: 244 AGASVAIPIKGEAESLNLATAAAMCLWETVR 274 >UniRef50_A5US41 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexaceae RepID=A5US41_ROSS1 Length = 262 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 89/264 (33%), Gaps = 13/264 (4%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVT--PRF 140 + + + + R+R + G +S + + + P Sbjct: 4 SPANQHVKRIRSLASDRHERRRERMLVLEGVRLVADALESGATLTLTLYAPDQLQLTPAG 63 Query: 141 KEALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVL 200 L+ + A + + AS T H GV L + G +L Sbjct: 64 AALLQKLR-YLPASYEATPQVVAAASDTVHPQGVVALASWPHVAP--------GKPGLLL 114 Query: 201 ALENESNPHNLGGMMRSCAHFGVKGVVVQ-DAALLESGAAIRTAEGGAEHVQPITGDNIV 259 ++ +P NLG ++RS GV V+ L + +R+A G + + Sbjct: 115 VIDAVQDPGNLGTLLRSAEAVGVAQVLCSVGTVDLYAPKVVRSAMGAHFRLAMEQDLSWD 174 Query: 260 NVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDG 319 + + V E P + L++G E GL DAAR ++ I Sbjct: 175 AIGERLASVD-HVYAADPEARMPYYAADWRQPSALLVGNEAHGLSDAARRLATKQIAIPM 233 Query: 320 TGNVAGLNISVATGVLLGEWWRQN 343 G LN++VA V+L E RQ Sbjct: 234 RGGTESLNVAVAASVILFEALRQR 257 >UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GVZ1_SORC5 Length = 248 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 5/242 (2%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 VYG + ++ + + P+ R EL + S Sbjct: 4 LVYGLQPVREAIRAHGARVGWVLVQRDGGPKLDALARLAEGQGIPTERAPRNELDRRSAG 63 Query: 169 EHHGGVCFLIKKRNGTTVQQWV----SQAGAQDCVLALENESNPHNLGGMMRSCAHFGVK 224 H G + V + Q GA +AL+ +P N G ++RS G + Sbjct: 64 GRHQGAVASAPELQIVGVDEIPVVEEGQPGAGTITVALDGVMDPQNFGAVIRSAVALGAR 123 Query: 225 GVVVQDAA-LLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSSEQGKPL 283 ++ + + + A R + G EH + ++ + L+ G + ++ L Sbjct: 124 AILWPEHSSAPLTPATFRASAGAIEHARLCRVPSLPDALEALAARGVAAIALDAQGPVEL 183 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLGEWWRQN 343 + L + +V+G E +G + R ++ TG ++ LN SVA + L E RQ Sbjct: 184 GELPLTGPVAIVIGAEDKGTRRSVRRVCQHVARLPMTGPISSLNASVAGAIALYEVVRQR 243 Query: 344 KA 345 +A Sbjct: 244 RA 245 >UniRef50_B6BUD4 tRNA/rRNA methyltransferase n=1 Tax=beta proteobacterium KB13 RepID=B6BUD4_9PROT Length = 257 Score = 231 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 98/261 (37%), Gaps = 13/261 (4%) Query: 83 KADHGGISGKSFIDPEVLRRQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKE 142 D+ + + RQ T + G + +A + + + +S + E Sbjct: 6 SKDNSRLKELRKVQHNKSYRQENNLTIIEGPHLLEAYL-NEKNDFLALFCSESFNKNYPE 64 Query: 143 ALRWMAANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLAL 202 + R +++ + S + G+ LI+ L L Sbjct: 65 YCKKGWEERI--YILPDNFFNDISELKTPIGILALIEIPQ----NDSYPNHFHDGMYLFL 118 Query: 203 ENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDNIVNV 261 + +P NLG ++R+ G KG+ + + A S +R ++G + +I N+ Sbjct: 119 DKVQDPGNLGTILRTSQALGHKGIFLSEQCADPWSPKTLRASQGFQFQLPIYQNVDISNL 178 Query: 262 LDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTG 321 + G++ V + +F + K +L+LG E +G+ +D + + Sbjct: 179 I----SHGFSFVVADLNG-QSVFDYNFSHKTILILGSEGQGVTTKLKDIAHDEISLPMMN 233 Query: 322 NVAGLNISVATGVLLGEWWRQ 342 NV LN++V+ ++ ++ Q Sbjct: 234 NVESLNVAVSAAIIGYQFLNQ 254 >UniRef50_C7M4Y5 tRNA/rRNA methyltransferase (SpoU) n=13 Tax=Bacteroidetes RepID=C7M4Y5_CAPOD Length = 267 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 9/266 (3%) Query: 82 EKADHGGISGKSFIDPEVLR-RQRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRF 140 + + K + E R R++ V G + + + + + Sbjct: 3 ITSTQNPLIKKIVLLSEKSRERKKEGICVVEGAREIRLALE-GGYTLETLLYQPEIFAE- 60 Query: 141 KEALRWMA--ANRKAYHVVDEAELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDC 198 + L+ ++ A R + + K S GV LI+ + + ++ Sbjct: 61 EHLLKLLSHTAQRVNPIAISKEVYQKISYRSSTEGVIALIQTKKHSL--DTLAFVTDSPL 118 Query: 199 VLALENESNPHNLGGMMRSCAHFGVKGVVVQD-AALLESGAAIRTAEGGAEHVQPITGDN 257 +L E P N+G ++R+ + V++ + L + IR++ G V T + Sbjct: 119 LLVAEAPEKPGNIGALLRTADAANIDAVIIANPKTDLYNPNIIRSSVGCVFTVPIAT-GS 177 Query: 258 IVNVLDDFRQAGYTVVTTSSEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKI 317 V+D + G + KP ++ S +V+G E +GL + + + I Sbjct: 178 TTEVIDFLKAKGINSYCAALTAFKPYYEVSFEEASAIVVGTEDQGLTEEWLTHSTQNIII 237 Query: 318 DGTGNVAGLNISVATGVLLGEWWRQN 343 G + +N+SVA VL+ E RQ Sbjct: 238 PMEGVIDSMNVSVAAAVLIFEAKRQR 263 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 101/234 (43%), Gaps = 9/234 (3%) Query: 109 RVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEAELTKASGT 168 +YG++ L + + W + + + + +VV E +L + T Sbjct: 5 LIYGKHVIYELLKKHKNMVKEIWV---KNLKLLDEFD-LKNTKIKINVVSENKLDQLLKT 60 Query: 169 -EHHGGVCFLIKKRNGTTVQQWVS--QAGAQDCVLALENESNPHNLGGMMRSCAHFGVKG 225 E H G+ IK N T + ++ + VL L+ +P+N G ++RSC+ V G Sbjct: 61 NELHQGIIAQIKDFNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSLLNVDG 120 Query: 226 VV-VQDAALLESGAAIRTAEGGAEHVQPITGDNIVNVLDDFRQAGYTVVTTSS-EQGKPL 283 ++ + + + ++T+ G A ++ +N+ N + + G+ + T+ + + Sbjct: 121 IIILDKKQVQVNSTVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQNSTDM 180 Query: 284 FKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGVLLG 337 KT K V+++G E +G+ + +D + + N+ N SVA ++ Sbjct: 181 TKTQFANKSVVIIGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.167 0.471 Lambda K H 0.267 0.0511 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,180,830,298 Number of Sequences: 3077464 Number of extensions: 109005540 Number of successful extensions: 364829 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2983 Number of HSP's successfully gapped in prelim test: 1715 Number of HSP's that attempted gapping in prelim test: 343894 Number of HSP's gapped (non-prelim): 14613 length of query: 345 length of database: 1,040,396,356 effective HSP length: 129 effective length of query: 216 effective length of database: 643,403,500 effective search space: 138975156000 effective search space used: 138975156000 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.3 bits) S2: 94 (40.5 bits)