BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (110 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AET0 Chaperone-like protein hdeA n=59 Tax=Enterobacte... 219 2e-56 UniRef50_B7LQG8 Stress response protein, acid-resistance protein... 172 4e-42 UniRef50_C1D607 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 89 3e-17 UniRef50_Q2YK18 Chaperone-like protein hdeA n=35 Tax=Brucella Re... 84 2e-15 UniRef50_Q2KWS9 Acid-resistance protein, (Putative chaperone) n=... 82 6e-15 UniRef50_Q2KVV4 Acid-resistance protein, (Putative chaperone) n=... 82 6e-15 UniRef50_B2PWI3 Putative uncharacterized protein n=6 Tax=Provide... 80 2e-14 UniRef50_C1D4E4 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 67 2e-10 UniRef50_B1Z8R9 HNS-dependent expression A n=4 Tax=Methylobacter... 53 3e-06 UniRef50_B2PVU4 Putative uncharacterized protein n=1 Tax=Provide... 47 1e-04 >UniRef50_P0AET0 Chaperone-like protein hdeA n=59 Tax=Enterobacteriaceae RepID=HDEA_ECO57 Length = 110 Score = 219 bits (558), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL Sbjct: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM Sbjct: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 >UniRef50_B7LQG8 Stress response protein, acid-resistance protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG8_ESCF3 Length = 127 Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 87/110 (79%), Positives = 102/110 (92%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK + ++LGGLLL+PV+SNAA+ QKAADN+KPVNSWTCEDFLA+D +FQPTAVGFAEAL Sbjct: 18 MKKAISILLGGLLLMPVISNAAETQKAADNQKPVNSWTCEDFLALDATFQPTAVGFAEAL 77 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 N KDKPEDAV+DVQGI TVTPAIVQACTQDK+A+FK+K +GEW KIKKD+ Sbjct: 78 NKKDKPEDAVMDVQGIETVTPAIVQACTQDKKASFKEKAQGEWAKIKKDL 127 >UniRef50_C1D607 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D607_LARHH Length = 105 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 39/80 (48%), Positives = 55/80 (68%) Query: 31 KKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQD 90 KKPV+ WTCE+FL +D+ F+P AV F+E LN K +P DAV+D G VTP +V C +D Sbjct: 26 KKPVSQWTCEEFLTLDDQFKPNAVYFSEGLNKKHQPVDAVMDETGALKVTPMVVTECQKD 85 Query: 91 KQANFKDKVKGEWDKIKKDM 110 ++A+F K+K W I++ M Sbjct: 86 RKASFWSKLKTTWQHIEQKM 105 >UniRef50_Q2YK18 Chaperone-like protein hdeA n=35 Tax=Brucella RepID=HDEA_BRUA2 Length = 114 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 58/89 (65%) Query: 18 VSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIA 77 ++ +A K KK V+ TCEDF ++ESF+PT VG+ N K K EDAV+DV GI Sbjct: 25 MAESAKTHKTDMAKKKVSELTCEDFNGLEESFKPTVVGWVVGFNKKGKEEDAVIDVDGIE 84 Query: 78 TVTPAIVQACTQDKQANFKDKVKGEWDKI 106 TVTPAI++AC Q+ +A+F K + E K+ Sbjct: 85 TVTPAIIEACKQEPKASFWKKAEAELKKV 113 >UniRef50_Q2KWS9 Acid-resistance protein, (Putative chaperone) n=1 Tax=Bordetella avium 197N RepID=Q2KWS9_BORA1 Length = 98 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 2/84 (2%) Query: 14 LLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDV 73 +L + S A A AD KKPV W C D+L V+E+++PTA+GFAEA+N K K EDAV+D+ Sbjct: 10 MLGLASLAGAAH--ADTKKPVQLWLCSDYLEVNETYRPTALGFAEAVNKKGKVEDAVVDL 67 Query: 74 QGIATVTPAIVQACTQDKQANFKD 97 +GI + P+++ C ++ + +D Sbjct: 68 EGIEKIKPSLLTYCKENPKIALRD 91 >UniRef50_Q2KVV4 Acid-resistance protein, (Putative chaperone) n=1 Tax=Bordetella avium 197N RepID=Q2KVV4_BORA1 Length = 117 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 34/70 (48%), Positives = 50/70 (71%) Query: 28 ADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQAC 87 AD KKP+ W C D+L ++ES++P A+GFAEA+N K KPED V+D++GIA +TP +V C Sbjct: 23 ADAKKPMPLWQCSDYLQLNESYRPVALGFAEAVNRKGKPEDDVVDIEGIAQITPTLVTYC 82 Query: 88 TQDKQANFKD 97 ++ + D Sbjct: 83 QENPKVALTD 92 >UniRef50_B2PWI3 Putative uncharacterized protein n=6 Tax=Providencia RepID=B2PWI3_PROST Length = 113 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 3/93 (3%) Query: 8 ILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 + G++ + +++ +A A + KPV+ W CEDFL +D++F PTA+G AE + K K E Sbjct: 18 LFAGIITMSLMATSA---FATTDTKPVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVE 74 Query: 68 DAVLDVQGIATVTPAIVQACTQDKQANFKDKVK 100 D L++ GI TVTP IV AC + + +F KV+ Sbjct: 75 DPTLNISGIETVTPLIVDACKKAPKESFIQKVE 107 >UniRef50_C1D4E4 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4E4_LARHH Length = 110 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 27/51 (52%), Positives = 37/51 (72%) Query: 37 WTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQAC 87 WTC+DFL +DESF+P V +AE NNK KP+ A++DVQG+ + P +V C Sbjct: 39 WTCQDFLDLDESFKPKVVYWAEGFNNKGKPDAAMVDVQGVEKIIPVVVDQC 89 >UniRef50_B1Z8R9 HNS-dependent expression A n=4 Tax=Methylobacterium RepID=B1Z8R9_METPB Length = 119 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Query: 5 LGVILGGLLLLPVVSNAADAQKAADN--KKPVNSWTCEDFLAVDESFQPTAVGFAEALNN 62 + V+L L+ S A K + KP+ TCE+F +++F+P V +A Sbjct: 14 IAVVLSAGLVQAETSGGKSADKHQEKLASKPLEKVTCEEFNGFEDTFKPKVVAWAAGYKQ 73 Query: 63 KDKPEDAV-LDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKI 106 K DAV +D+ G+ VTP I + C + A+ K+ GE K+ Sbjct: 74 GQKKPDAVAIDIAGVEKVTPLIAEECRKAPAASLWSKIDGELKKV 118 >UniRef50_B2PVU4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PVU4_PROST Length = 49 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 25/35 (71%) Query: 33 PVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 PV+ W CEDFL +D++F PTA+G AE + K K E Sbjct: 8 PVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVE 42 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AET0 Chaperone-like protein hdeA n=59 Tax=Enterobacte... 157 9e-38 UniRef50_B7LQG8 Stress response protein, acid-resistance protein... 143 1e-33 UniRef50_B2PWI3 Putative uncharacterized protein n=6 Tax=Provide... 127 1e-28 UniRef50_B1Z8R9 HNS-dependent expression A n=4 Tax=Methylobacter... 124 1e-27 UniRef50_C1D607 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 122 3e-27 UniRef50_Q2YK18 Chaperone-like protein hdeA n=35 Tax=Brucella Re... 121 9e-27 UniRef50_Q2KWS9 Acid-resistance protein, (Putative chaperone) n=... 114 1e-24 UniRef50_Q2KVV4 Acid-resistance protein, (Putative chaperone) n=... 107 1e-22 UniRef50_C1D4E4 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 87 2e-16 UniRef50_B2PVU4 Putative uncharacterized protein n=1 Tax=Provide... 60 2e-08 Sequences not found previously or not previously below threshold: UniRef50_A1TIB2 Putative uncharacterized protein n=2 Tax=Acidovo... 59 4e-08 UniRef50_C5AMD7 HdeA protein n=1 Tax=Burkholderia glumae BGR1 Re... 54 1e-06 UniRef50_A6CY27 Putative uncharacterized protein n=1 Tax=Vibrio ... 46 5e-04 UniRef50_C9NTA9 Putative uncharacterized protein n=1 Tax=Vibrio ... 45 8e-04 UniRef50_B5XU12 HdeB family protein n=5 Tax=Klebsiella RepID=B5X... 43 0.003 UniRef50_A1JKE6 Putative exported protein n=38 Tax=Yersinia RepI... 40 0.030 UniRef50_B4T5V2 Protein HdeB n=33 Tax=Enterobacteriaceae RepID=B... 39 0.052 >UniRef50_P0AET0 Chaperone-like protein hdeA n=59 Tax=Enterobacteriaceae RepID=HDEA_ECO57 Length = 110 Score = 157 bits (397), Expect = 9e-38, Method: Composition-based stats. Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL Sbjct: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM Sbjct: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 >UniRef50_B7LQG8 Stress response protein, acid-resistance protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG8_ESCF3 Length = 127 Score = 143 bits (361), Expect = 1e-33, Method: Composition-based stats. Identities = 87/110 (79%), Positives = 102/110 (92%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK + ++LGGLLL+PV+SNAA+ QKAADN+KPVNSWTCEDFLA+D +FQPTAVGFAEAL Sbjct: 18 MKKAISILLGGLLLMPVISNAAETQKAADNQKPVNSWTCEDFLALDATFQPTAVGFAEAL 77 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 N KDKPEDAV+DVQGI TVTPAIVQACTQDK+A+FK+K +GEW KIKKD+ Sbjct: 78 NKKDKPEDAVMDVQGIETVTPAIVQACTQDKKASFKEKAQGEWAKIKKDL 127 >UniRef50_B2PWI3 Putative uncharacterized protein n=6 Tax=Providencia RepID=B2PWI3_PROST Length = 113 Score = 127 bits (318), Expect = 1e-28, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 3/98 (3%) Query: 8 ILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 + G++ + +++ +A A + KPV+ W CEDFL +D++F PTA+G AE + K K E Sbjct: 18 LFAGIITMSLMATSA---FATTDTKPVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVE 74 Query: 68 DAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDK 105 D L++ GI TVTP IV AC + + +F KV+ K Sbjct: 75 DPTLNISGIETVTPLIVDACKKAPKESFIQKVEEYLKK 112 >UniRef50_B1Z8R9 HNS-dependent expression A n=4 Tax=Methylobacterium RepID=B1Z8R9_METPB Length = 119 Score = 124 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 4 VLGVILGGLLLLPVVSNAADAQKAAD--NKKPVNSWTCEDFLAVDESFQPTAVGFAEALN 61 + V+L L+ S A K + KP+ TCE+F +++F+P V +A Sbjct: 13 AIAVVLSAGLVQAETSGGKSADKHQEKLASKPLEKVTCEEFNGFEDTFKPKVVAWAAGYK 72 Query: 62 NKDKPEDAV-LDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKI 106 K DAV +D+ G+ VTP I + C + A+ K+ GE K+ Sbjct: 73 QGQKKPDAVAIDIAGVEKVTPLIAEECRKAPAASLWSKIDGELKKV 118 >UniRef50_C1D607 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D607_LARHH Length = 105 Score = 122 bits (306), Expect = 3e-27, Method: Composition-based stats. Identities = 39/80 (48%), Positives = 55/80 (68%) Query: 31 KKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQD 90 KKPV+ WTCE+FL +D+ F+P AV F+E LN K +P DAV+D G VTP +V C +D Sbjct: 26 KKPVSQWTCEEFLTLDDQFKPNAVYFSEGLNKKHQPVDAVMDETGALKVTPMVVTECQKD 85 Query: 91 KQANFKDKVKGEWDKIKKDM 110 ++A+F K+K W I++ M Sbjct: 86 RKASFWSKLKTTWQHIEQKM 105 >UniRef50_Q2YK18 Chaperone-like protein hdeA n=35 Tax=Brucella RepID=HDEA_BRUA2 Length = 114 Score = 121 bits (302), Expect = 9e-27, Method: Composition-based stats. Identities = 42/91 (46%), Positives = 58/91 (63%) Query: 16 PVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQG 75 ++ +A K KK V+ TCEDF ++ESF+PT VG+ N K K EDAV+DV G Sbjct: 23 GAMAESAKTHKTDMAKKKVSELTCEDFNGLEESFKPTVVGWVVGFNKKGKEEDAVIDVDG 82 Query: 76 IATVTPAIVQACTQDKQANFKDKVKGEWDKI 106 I TVTPAI++AC Q+ +A+F K + E K+ Sbjct: 83 IETVTPAIIEACKQEPKASFWKKAEAELKKV 113 >UniRef50_Q2KWS9 Acid-resistance protein, (Putative chaperone) n=1 Tax=Bordetella avium 197N RepID=Q2KWS9_BORA1 Length = 98 Score = 114 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 6/100 (6%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK + + +L + S A A AD KKPV W C D+L V+E+++PTA+GFAEA+ Sbjct: 1 MKKAML----AVTMLGLASLAGAAH--ADTKKPVQLWLCSDYLEVNETYRPTALGFAEAV 54 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVK 100 N K K EDAV+D++GI + P+++ C ++ + +D + Sbjct: 55 NKKGKVEDAVVDLEGIEKIKPSLLTYCKENPKIALRDALD 94 >UniRef50_Q2KVV4 Acid-resistance protein, (Putative chaperone) n=1 Tax=Bordetella avium 197N RepID=Q2KVV4_BORA1 Length = 117 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 5/99 (5%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK++ + L A AD KKP+ W C D+L ++ES++P A+GFAEA+ Sbjct: 1 MKKIIISLSIAAATLSFSGTA-----LADAKKPMPLWQCSDYLQLNESYRPVALGFAEAV 55 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKV 99 N K KPED V+D++GIA +TP +V C ++ + D + Sbjct: 56 NRKGKPEDDVVDIEGIAQITPTLVTYCQENPKVALTDAL 94 >UniRef50_C1D4E4 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4E4_LARHH Length = 110 Score = 86.8 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 39/66 (59%) Query: 36 SWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANF 95 WTC+DFL +DESF+P V +AE NNK KP+ A++DVQG+ + P +V C Sbjct: 38 KWTCQDFLDLDESFKPKVVYWAEGFNNKGKPDAAMVDVQGVEKIIPVVVDQCKLKPTEKL 97 Query: 96 KDKVKG 101 +K Sbjct: 98 MKIMKS 103 >UniRef50_B2PVU4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PVU4_PROST Length = 49 Score = 60.2 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 19/35 (54%), Positives = 25/35 (71%) Query: 33 PVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 PV+ W CEDFL +D++F PTA+G AE + K K E Sbjct: 8 PVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVE 42 >UniRef50_A1TIB2 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1TIB2_ACIAC Length = 134 Score = 59.0 bits (141), Expect = 4e-08, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 31 KKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQD 90 +KP+ TC D++ +DE+ +P + +A K E AV + I + P + Q C+ Sbjct: 48 RKPLVKTTCSDYVGMDETVKPKFIYYAVGHTQGGKKE-AVFEEDAIEKIKPELDQYCSVH 106 Query: 91 KQANFKDKV 99 + KV Sbjct: 107 LTKSAYAKV 115 >UniRef50_C5AMD7 HdeA protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AMD7_BURGB Length = 113 Score = 54.4 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK+ + L +N A AQ AA P C DF +D++++P + +A + Sbjct: 1 MKKITMWYMAAALAGIATANVAFAQTAAKTISP-AKMVCADFETLDDAYKPAVIYWATGV 59 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVK 100 + E + + V + + C + DK++ Sbjct: 60 DKLGVRETDQITIDTAHPVAEQVTEECKATPKVKIVDKIR 99 >UniRef50_A6CY27 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CY27_9VIBR Length = 116 Score = 45.6 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Query: 35 NSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATV-TPAIVQACTQDKQA 93 ++ TC +FL +D P +G+ A N+K E V D+ + + IV C + A Sbjct: 35 STMTCSEFLELDYDLMPVTLGYLVAWNHKSNSEVQVFDITQLDAIEIDEIVDQCHKAPAA 94 Query: 94 NFKDKVKGEWDKIKKD 109 V + K + Sbjct: 95 RVHKVVAKQLADAKSE 110 >UniRef50_C9NTA9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NTA9_9VIBR Length = 107 Score = 44.8 bits (104), Expect = 8e-04, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 2/104 (1%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKK--PVNSWTCEDFLAVDESFQPTAVGFAE 58 MKK V++ + V ++ + ++++ V+ TCE F ++ QP + + Sbjct: 1 MKKPFTVLILAAVFGVVGYSSVKSYAECEDQEILSVDKMTCEQFNELELQTQPVVMEYLL 60 Query: 59 ALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE 102 + N +++ GI + Q C D V E Sbjct: 61 SWNYNTDEVAVIIESNGIEAYIDELAQQCRDTPDIMLHDIVVDE 104 >UniRef50_B5XU12 HdeB family protein n=5 Tax=Klebsiella RepID=B5XU12_KLEP3 Length = 121 Score = 43.2 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Query: 8 ILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVD-ESFQPTAVGFAEALNNKDKP 66 ++ G+++L + S AA A D + + C+D+L +D ++ P + + +P Sbjct: 17 LMAGIIVLAISSVAAGKNIAPDEVRTRDMMRCQDYLQLDPRTWTPMVI-WLMNDPFSLQP 75 Query: 67 EDAVLDVQGIATVTPAIVQACTQDKQANFKD 97 + + +TP + + C Q+ A Sbjct: 76 PEWTDFHEAELVLTPILTEICRQEPDAWLTS 106 >UniRef50_A1JKE6 Putative exported protein n=38 Tax=Yersinia RepID=A1JKE6_YERE8 Length = 110 Score = 39.8 bits (91), Expect = 0.030, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 12/78 (15%) Query: 35 NSWTCEDFLAVD-ESFQPTAVGFAEALNNKDKPEDAVLDVQGIAT-VTPAIVQACTQDKQ 92 + TC++FL ++ +SF P V + + + K D V D+ T VTP +V+ C + Sbjct: 35 SDMTCKEFLDLNPKSFTP-VVYWVLNDDTQYKKGDYV-DLHETDTIVTPKVVEVCKKAP- 91 Query: 93 ANFKDKVKGEWDKIKKDM 110 + + +IK+D+ Sbjct: 92 -------ESKLSEIKQDI 102 >UniRef50_B4T5V2 Protein HdeB n=33 Tax=Enterobacteriaceae RepID=B4T5V2_SALNS Length = 109 Score = 39.0 bits (89), Expect = 0.052, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 4/100 (4%) Query: 6 GVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDK 65 G+I+ L+ V+ A D K K ++ C++F+ ++ + + K Sbjct: 10 GIIVAALVTSVSVNAATDTTKTNVTPKGMS---CQEFVDLNPQTMAPVAFWVLNEDEDFK 66 Query: 66 PEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDK 105 D V + T P V+ C ++ Q+ K+K E K Sbjct: 67 GGDYVDFQETETTAVPLAVELCKKNPQSEL-SKIKDEIKK 105 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AET0 Chaperone-like protein hdeA n=59 Tax=Enterobacte... 126 2e-28 UniRef50_B7LQG8 Stress response protein, acid-resistance protein... 117 1e-25 UniRef50_C9NTA9 Putative uncharacterized protein n=1 Tax=Vibrio ... 107 1e-22 UniRef50_B2PWI3 Putative uncharacterized protein n=6 Tax=Provide... 104 7e-22 UniRef50_Q2YK18 Chaperone-like protein hdeA n=35 Tax=Brucella Re... 104 9e-22 UniRef50_B1Z8R9 HNS-dependent expression A n=4 Tax=Methylobacter... 101 6e-21 UniRef50_C1D607 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 100 1e-20 UniRef50_Q2KVV4 Acid-resistance protein, (Putative chaperone) n=... 99 2e-20 UniRef50_Q2KWS9 Acid-resistance protein, (Putative chaperone) n=... 98 8e-20 UniRef50_C5AMD7 HdeA protein n=1 Tax=Burkholderia glumae BGR1 Re... 83 3e-15 UniRef50_C1D4E4 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 83 3e-15 UniRef50_A6CY27 Putative uncharacterized protein n=1 Tax=Vibrio ... 81 9e-15 UniRef50_A1TIB2 Putative uncharacterized protein n=2 Tax=Acidovo... 74 2e-12 UniRef50_B2PVU4 Putative uncharacterized protein n=1 Tax=Provide... 51 1e-05 Sequences not found previously or not previously below threshold: UniRef50_Q89I73 Bll5766 protein n=3 Tax=Bradyrhizobiaceae RepID=... 46 5e-04 UniRef50_A1JKE6 Putative exported protein n=38 Tax=Yersinia RepI... 42 0.007 UniRef50_P0AET3 Protein hdeB n=61 Tax=Enterobacteriaceae RepID=H... 39 0.032 UniRef50_D0ZDS4 Acid-resistance protein n=2 Tax=Edwardsiella Rep... 39 0.033 UniRef50_B5XU12 HdeB family protein n=5 Tax=Klebsiella RepID=B5X... 39 0.038 UniRef50_UPI0001C33F4A acid-resistance protein n=1 Tax=Citrobact... 39 0.043 UniRef50_B7LQG7 Protein hdeB (10K-L protein) Periplasmic protein... 39 0.048 UniRef50_UPI000197C70E acid-resistance protein n=1 Tax=Providenc... 38 0.083 UniRef50_B7JYP2 Putative uncharacterized protein n=3 Tax=Chrooco... 38 0.084 >UniRef50_P0AET0 Chaperone-like protein hdeA n=59 Tax=Enterobacteriaceae RepID=HDEA_ECO57 Length = 110 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 110/110 (100%), Positives = 110/110 (100%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL Sbjct: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM Sbjct: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 >UniRef50_B7LQG8 Stress response protein, acid-resistance protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG8_ESCF3 Length = 127 Score = 117 bits (292), Expect = 1e-25, Method: Composition-based stats. Identities = 87/110 (79%), Positives = 102/110 (92%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK + ++LGGLLL+PV+SNAA+ QKAADN+KPVNSWTCEDFLA+D +FQPTAVGFAEAL Sbjct: 18 MKKAISILLGGLLLMPVISNAAETQKAADNQKPVNSWTCEDFLALDATFQPTAVGFAEAL 77 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM 110 N KDKPEDAV+DVQGI TVTPAIVQACTQDK+A+FK+K +GEW KIKKD+ Sbjct: 78 NKKDKPEDAVMDVQGIETVTPAIVQACTQDKKASFKEKAQGEWAKIKKDL 127 >UniRef50_C9NTA9 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NTA9_9VIBR Length = 107 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 2/104 (1%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKK--PVNSWTCEDFLAVDESFQPTAVGFAE 58 MKK V++ + V ++ + ++++ V+ TCE F ++ QP + + Sbjct: 1 MKKPFTVLILAAVFGVVGYSSVKSYAECEDQEILSVDKMTCEQFNELELQTQPVVMEYLL 60 Query: 59 ALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE 102 + N +++ GI + Q C D V E Sbjct: 61 SWNYNTDEVAVIIESNGIEAYIDELAQQCRDTPDIMLHDIVVDE 104 >UniRef50_B2PWI3 Putative uncharacterized protein n=6 Tax=Providencia RepID=B2PWI3_PROST Length = 113 Score = 104 bits (260), Expect = 7e-22, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 3/98 (3%) Query: 8 ILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 + G++ + +++ +A A + KPV+ W CEDFL +D++F PTA+G AE + K K E Sbjct: 18 LFAGIITMSLMATSAFA---TTDTKPVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVE 74 Query: 68 DAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDK 105 D L++ GI TVTP IV AC + + +F KV+ K Sbjct: 75 DPTLNISGIETVTPLIVDACKKAPKESFIQKVEEYLKK 112 >UniRef50_Q2YK18 Chaperone-like protein hdeA n=35 Tax=Brucella RepID=HDEA_BRUA2 Length = 114 Score = 104 bits (259), Expect = 9e-22, Method: Composition-based stats. Identities = 42/92 (45%), Positives = 58/92 (63%) Query: 15 LPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQ 74 ++ +A K KK V+ TCEDF ++ESF+PT VG+ N K K EDAV+DV Sbjct: 22 GGAMAESAKTHKTDMAKKKVSELTCEDFNGLEESFKPTVVGWVVGFNKKGKEEDAVIDVD 81 Query: 75 GIATVTPAIVQACTQDKQANFKDKVKGEWDKI 106 GI TVTPAI++AC Q+ +A+F K + E K+ Sbjct: 82 GIETVTPAIIEACKQEPKASFWKKAEAELKKV 113 >UniRef50_B1Z8R9 HNS-dependent expression A n=4 Tax=Methylobacterium RepID=B1Z8R9_METPB Length = 119 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%) Query: 4 VLGVILGGLLLLPVVSNAADAQKAAD--NKKPVNSWTCEDFLAVDESFQPTAVGFAEALN 61 + V+L L+ S A K + KP+ TCE+F +++F+P V +A Sbjct: 13 AIAVVLSAGLVQAETSGGKSADKHQEKLASKPLEKVTCEEFNGFEDTFKPKVVAWAAGYK 72 Query: 62 NKDKPEDAV-LDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKI 106 K DAV +D+ G+ VTP I + C + A+ K+ GE K+ Sbjct: 73 QGQKKPDAVAIDIAGVEKVTPLIAEECRKAPAASLWSKIDGELKKV 118 >UniRef50_C1D607 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D607_LARHH Length = 105 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 39/80 (48%), Positives = 55/80 (68%) Query: 31 KKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQD 90 KKPV+ WTCE+FL +D+ F+P AV F+E LN K +P DAV+D G VTP +V C +D Sbjct: 26 KKPVSQWTCEEFLTLDDQFKPNAVYFSEGLNKKHQPVDAVMDETGALKVTPMVVTECQKD 85 Query: 91 KQANFKDKVKGEWDKIKKDM 110 ++A+F K+K W I++ M Sbjct: 86 RKASFWSKLKTTWQHIEQKM 105 >UniRef50_Q2KVV4 Acid-resistance protein, (Putative chaperone) n=1 Tax=Bordetella avium 197N RepID=Q2KVV4_BORA1 Length = 117 Score = 99 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 5/106 (4%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK++ + L A AD KKP+ W C D+L ++ES++P A+GFAEA+ Sbjct: 1 MKKIIISLSIAAATLSFSGTA-----LADAKKPMPLWQCSDYLQLNESYRPVALGFAEAV 55 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKI 106 N K KPED V+D++GIA +TP +V C ++ + D + Sbjct: 56 NRKGKPEDDVVDIEGIAQITPTLVTYCQENPKVALTDALAQTKANA 101 >UniRef50_Q2KWS9 Acid-resistance protein, (Putative chaperone) n=1 Tax=Bordetella avium 197N RepID=Q2KWS9_BORA1 Length = 98 Score = 98.0 bits (242), Expect = 8e-20, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 6/100 (6%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK + + +L + S A A AD KKPV W C D+L V+E+++PTA+GFAEA+ Sbjct: 1 MKKA----MLAVTMLGLASLAGAAH--ADTKKPVQLWLCSDYLEVNETYRPTALGFAEAV 54 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVK 100 N K K EDAV+D++GI + P+++ C ++ + +D + Sbjct: 55 NKKGKVEDAVVDLEGIEKIKPSLLTYCKENPKIALRDALD 94 >UniRef50_C5AMD7 HdeA protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AMD7_BURGB Length = 113 Score = 83.0 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MKK+ + L +N A AQ AA P C DF +D++++P + +A + Sbjct: 1 MKKITMWYMAAALAGIATANVAFAQTAAKTISP-AKMVCADFETLDDAYKPAVIYWATGV 59 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVK 100 + E + + V + + C + DK++ Sbjct: 60 DKLGVRETDQITIDTAHPVAEQVTEECKATPKVKIVDKIR 99 >UniRef50_C1D4E4 HdeA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D4E4_LARHH Length = 110 Score = 82.6 bits (202), Expect = 3e-15, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 39/66 (59%) Query: 36 SWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANF 95 WTC+DFL +DESF+P V +AE NNK KP+ A++DVQG+ + P +V C Sbjct: 38 KWTCQDFLDLDESFKPKVVYWAEGFNNKGKPDAAMVDVQGVEKIIPVVVDQCKLKPTEKL 97 Query: 96 KDKVKG 101 +K Sbjct: 98 MKIMKS 103 >UniRef50_A6CY27 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CY27_9VIBR Length = 116 Score = 81.0 bits (198), Expect = 9e-15, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 1/110 (0%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 M ++ ++ P + + ++ TC +FL +D P +G+ A Sbjct: 1 MFSLVTILAYAANAQPENTGEVTLSQPIATASFESTMTCSEFLELDYDLMPVTLGYLVAW 60 Query: 61 NNKDKPEDAVLDVQGIATV-TPAIVQACTQDKQANFKDKVKGEWDKIKKD 109 N+K E V D+ + + IV C + A V + K + Sbjct: 61 NHKSNSEVQVFDITQLDAIEIDEIVDQCHKAPAARVHKVVAKQLADAKSE 110 >UniRef50_A1TIB2 Putative uncharacterized protein n=2 Tax=Acidovorax RepID=A1TIB2_ACIAC Length = 134 Score = 73.7 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 31 KKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQD 90 +KP+ TC D++ +DE+ +P + +A K E AV + I + P + Q C+ Sbjct: 48 RKPLVKTTCSDYVGMDETVKPKFIYYAVGHTQGGKKE-AVFEEDAIEKIKPELDQYCSVH 106 Query: 91 KQANFKDKV 99 + KV Sbjct: 107 LTKSAYAKV 115 >UniRef50_B2PVU4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PVU4_PROST Length = 49 Score = 51.0 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 19/35 (54%), Positives = 25/35 (71%) Query: 33 PVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 PV+ W CEDFL +D++F PTA+G AE + K K E Sbjct: 8 PVSQWKCEDFLVIDDNFYPTAIGAAEIVTQKGKVE 42 >UniRef50_Q89I73 Bll5766 protein n=3 Tax=Bradyrhizobiaceae RepID=Q89I73_BRAJA Length = 101 Score = 45.6 bits (106), Expect = 5e-04, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 8/105 (7%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEAL 60 MK +L ++ L L + A K +++ TC FL E + + + Sbjct: 5 MKTMLSILFAAALSLSSMPAHA-------VKWDLSTMTCRQFLESGEDNIAVVLTWMDGW 57 Query: 61 NNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDK 105 K ++A++D + C ++ + K Sbjct: 58 -YKGDEDNAIIDTEVFIENAKKFGAYCGKNPTVSVVTAADEILGK 101 >UniRef50_A1JKE6 Putative exported protein n=38 Tax=Yersinia RepID=A1JKE6_YERE8 Length = 110 Score = 41.8 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%) Query: 35 NSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQAN 94 + TC++FL ++ V + + + K D V + VTP +V+ C + ++ Sbjct: 35 SDMTCKEFLDLNPKSFTPVVYWVLNDDTQYKKGDYVDLHETDTIVTPKVVEVCKKAPESK 94 Query: 95 FKDKVKGEWDKIKKDM 110 + + KK M Sbjct: 95 LSEIKQDILGFAKKHM 110 >UniRef50_P0AET3 Protein hdeB n=61 Tax=Enterobacteriaceae RepID=HDEB_ECOL6 Length = 108 Score = 39.4 bits (90), Expect = 0.032, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 2/94 (2%) Query: 5 LGVILGGLLLLPVVS--NAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNN 62 + + + + V+ + +AQ A + TC++F+ ++ + Sbjct: 3 ISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHEET 62 Query: 63 KDKPEDAVLDVQGIATVTPAIVQACTQDKQANFK 96 K D V + T P +++ C ++ Q N Sbjct: 63 VYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLY 96 >UniRef50_D0ZDS4 Acid-resistance protein n=2 Tax=Edwardsiella RepID=D0ZDS4_EDWTE Length = 120 Score = 39.4 bits (90), Expect = 0.033, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 3/96 (3%) Query: 4 VLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNK 63 V+ + L +L + A +AA P + TC++F+ ++ + + Sbjct: 15 VMKMTLLAAVLGTLTLGCASLAQAATETTP-QNMTCKEFVNLNPKAMTPVAFWMLNKDTD 73 Query: 64 DKPEDAVLDVQGIATVT-PAIVQACTQDKQANFKDK 98 K D V D + TV P +++ C Q Q D Sbjct: 74 YKGGDYV-DWNEVETVAVPQVMEVCKQHPQKKVMDI 108 >UniRef50_B5XU12 HdeB family protein n=5 Tax=Klebsiella RepID=B5XU12_KLEP3 Length = 121 Score = 39.4 bits (90), Expect = 0.038, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%) Query: 8 ILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPE 67 ++ G+++L + S AA A D + + C+D+L +D V + +P Sbjct: 17 LMAGIIVLAISSVAAGKNIAPDEVRTRDMMRCQDYLQLDPRTWTPMVIWLMNDPFSLQPP 76 Query: 68 DAVLDVQGIATVTPAIVQACTQDKQANFKD 97 + + +TP + + C Q+ A Sbjct: 77 EWTDFHEAELVLTPILTEICRQEPDAWLTS 106 >UniRef50_UPI0001C33F4A acid-resistance protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=UPI0001C33F4A Length = 108 Score = 39.1 bits (89), Expect = 0.043, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Query: 6 GVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDK 65 ++ +L+ V++ + A + TC++F+ + ++ TA+ F N D Sbjct: 5 MIVSAVMLMTFVMAPMSRAFATQATEAAPQDMTCKEFVDMSHQYK-TAIAFVIVNKNSDF 63 Query: 66 PEDAVLDVQGIATVT-PAIVQACTQDKQANF 95 D + +Q + TV P ++ C Q Sbjct: 64 KGDDYVPLQEVETVAVPKMINLCHQRPDTKL 94 >UniRef50_B7LQG7 Protein hdeB (10K-L protein) Periplasmic protein, repressed by H-NS n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LQG7_ESCF3 Length = 136 Score = 39.1 bits (89), Expect = 0.048, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 6 GVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDK 65 ++ G + ++NA A A++ K +C++F+ ++ + K Sbjct: 37 TLVFLGAVAALSLANAQSALAASEMPK---DMSCQEFINLNPKAMTPVAWWMLHEETVYK 93 Query: 66 PEDAVLDVQGIATVTPAIVQACTQDKQANFK 96 D V + T P +++ C ++ + N Sbjct: 94 GGDTVTLNETDLTQIPQVIEYCKKNPEKNLY 124 >UniRef50_UPI000197C70E acid-resistance protein n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C70E Length = 101 Score = 38.3 bits (87), Expect = 0.083, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 4/103 (3%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVD-ESFQPTAVGFAEA 59 MKK+ I + + N + + P +C++++ ++ +S+ P A+ + Sbjct: 1 MKKIFIPICITVAT-SLSFNVLATENEGMHLTP-EKMSCQEYIDLNPQSWAPIAMWMSNQ 58 Query: 60 LNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE 102 + L Q IA V P IV C + KD V + Sbjct: 59 TTQFKGGDFVSLSQQSIAEV-PLIVNFCKLHPNKSLKDYVSSK 100 >UniRef50_B7JYP2 Putative uncharacterized protein n=3 Tax=Chroococcales RepID=B7JYP2_CYAP8 Length = 106 Score = 38.3 bits (87), Expect = 0.084, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 5/106 (4%) Query: 1 MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVN----SWTCEDFLAVDESFQPTAVGF 56 MK++ ++ +L + + +A +N + TC + + + F Sbjct: 1 MKRIKALLSILVLTTVISGVGTSSSQAQENSGEMTVNLMEVTCRELFKASAEDKDLILVF 60 Query: 57 AEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE 102 L K V+D + T I C + +A + Sbjct: 61 YHGLVT-AKKNQMVIDRTQLEQATDKITDYCIDNPKATLMTVFEKY 105 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.119 0.285 Lambda K H 0.267 0.0364 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 464,207,666 Number of Sequences: 3077464 Number of extensions: 13812465 Number of successful extensions: 28965 Number of sequences better than 1.0e-01: 27 Number of HSP's better than 0.1 without gapping: 39 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 28913 Number of HSP's gapped (non-prelim): 54 length of query: 110 length of database: 1,040,396,356 effective HSP length: 78 effective length of query: 32 effective length of database: 800,354,164 effective search space: 25611333248 effective search space used: 25611333248 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 86 (37.9 bits)