BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (318 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulat... 657 0.0 UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=... 382 e-104 UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=P... 345 1e-93 UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=P... 338 2e-91 UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=P... 271 2e-71 UniRef50_Q1H3T0 Transcriptional regulator, AraC family n=27 Tax=... 259 6e-68 UniRef50_UPI0001744B11 AraC-type transcriptional regulator domai... 244 4e-63 UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein ... 240 4e-62 UniRef50_D2L3Y8 Transcriptional regulator, AraC family n=1 Tax=D... 233 9e-60 UniRef50_A9I0Y6 Transcriptional regulator, AraC family n=72 Tax=... 229 9e-59 UniRef50_A6W3U1 AraC-type transcriptional regulator domain prote... 229 1e-58 UniRef50_C9Y4C2 Uncharacterized HTH-type transcriptional regulat... 228 1e-58 UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n... 228 3e-58 UniRef50_Q30WL5 Transcriptional regulator, AraC family n=1 Tax=D... 228 3e-58 UniRef50_Q88K66 Transcriptional regulator, AraC family n=4 Tax=P... 222 1e-56 UniRef50_C4XTV7 AraC family transcriptional regulator n=5 Tax=Ba... 221 2e-56 UniRef50_Q1QZB6 Transcriptional regulator, AraC family n=10 Tax=... 219 8e-56 UniRef50_Q1ZUN2 AraC-family trancriptional regulator n=2 Tax=Pho... 213 5e-54 UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D... 210 6e-53 UniRef50_Q5E474 Predicted DNA-binding transcriptional regulator ... 206 7e-52 UniRef50_Q15PL3 Transcriptional regulator, AraC family n=3 Tax=A... 200 5e-50 UniRef50_A9AC46 AraC family transcriptional regulator n=1 Tax=Bu... 187 4e-46 UniRef50_Q089X8 Transcriptional regulator, AraC family n=4 Tax=P... 187 5e-46 UniRef50_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=P... 187 6e-46 UniRef50_C9P783 AraC-type DNA-binding domain-containing protein ... 184 3e-45 UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n... 183 7e-45 UniRef50_B6R5M8 AraC-family trancriptional regulator n=1 Tax=Pse... 182 2e-44 UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=D... 181 3e-44 UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein ... 178 2e-43 UniRef50_UPI00016AE94B transcriptional regulator, AraC family pr... 176 1e-42 UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Gr... 176 1e-42 UniRef50_B0SVQ8 Transcriptional regulator, AraC family n=8 Tax=c... 174 3e-42 UniRef50_Q1MYY9 AraC-family trancriptional regulator n=1 Tax=Ber... 173 6e-42 UniRef50_B3E2X9 Transcriptional regulator, AraC family n=7 Tax=B... 173 9e-42 UniRef50_B2IB97 Transcriptional regulator, AraC family n=5 Tax=R... 172 1e-41 UniRef50_Q15TL4 Transcriptional regulator, AraC family n=1 Tax=P... 172 2e-41 UniRef50_Q4ZQJ7 Helix-turn-helix, AraC type:AraC-type transcript... 167 4e-40 UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteoba... 167 5e-40 UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=... 166 1e-39 UniRef50_A3M8D5 Transcriptional regulator AraC family n=10 Tax=A... 162 2e-38 UniRef50_A8APL9 Putative uncharacterized protein n=1 Tax=Citroba... 160 6e-38 UniRef50_A7HDG1 AraC-type transcriptional regulator domain prote... 160 7e-38 UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=A... 159 1e-37 UniRef50_D2C3B7 Transcriptional regulator, AraC family n=2 Tax=E... 159 2e-37 UniRef50_Q7CW43 Transcriptional regulator, AraC family n=7 Tax=P... 158 2e-37 UniRef50_B4X416 AraC-type transcriptional regulator N-terminus d... 158 2e-37 UniRef50_B9Z2E6 Transcriptional regulator, AraC family n=1 Tax=L... 158 2e-37 UniRef50_Q3A5M5 Transcriptional regulator, AraC family n=4 Tax=D... 158 3e-37 UniRef50_B2KD36 Transcriptional regulator, AraC family n=1 Tax=E... 158 3e-37 UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=H... 157 4e-37 UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=... 157 4e-37 UniRef50_Q1QSH7 Transcriptional regulator, AraC family n=2 Tax=G... 156 7e-37 UniRef50_A6WBM1 AraC-type transcriptional regulator domain prote... 156 7e-37 UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n... 155 2e-36 UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus d... 155 3e-36 UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=G... 154 3e-36 UniRef50_Q1GMB4 Transcriptional regulator, AraC family n=3 Tax=R... 154 4e-36 UniRef50_B1X2S3 Transcriptional Regulator, AraC family n=3 Tax=C... 153 7e-36 UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=A... 153 9e-36 UniRef50_C6ARF9 Transcriptional regulator, AraC family n=4 Tax=P... 153 9e-36 UniRef50_C6D8S3 Transcriptional regulator, AraC family n=1 Tax=P... 152 1e-35 UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=B... 152 2e-35 UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] bra... 150 8e-35 UniRef50_B0C5B1 Transcriptional regulator, AraC family n=1 Tax=A... 150 8e-35 UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n... 149 1e-34 UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Prote... 149 2e-34 UniRef50_C8SHN4 Transcriptional regulator, AraC family n=2 Tax=M... 148 2e-34 UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteo... 148 2e-34 UniRef50_A9HQ74 Putative transcriptional regulator, AraC family ... 148 3e-34 UniRef50_A9WCQ6 AraC-type transcriptional regulator domain prote... 147 4e-34 UniRef50_A6FZ93 Transcriptional regulator, AraC family protein n... 147 5e-34 UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria... 147 5e-34 UniRef50_A6M087 AraC-type transcriptional regulator domain prote... 147 5e-34 UniRef50_Q65QM2 AraC protein n=1 Tax=Mannheimia succiniciproduce... 147 7e-34 UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=C... 147 7e-34 UniRef50_A9IS89 Transcriptional regulator, AraC family n=13 Tax=... 146 9e-34 UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein ... 145 2e-33 UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter fo... 145 3e-33 UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria... 144 4e-33 UniRef50_Q0SK59 Transcriptional regulator, AraC family protein n... 144 4e-33 UniRef50_C3MHY3 Putative transcriptional regulator, AraC family ... 144 5e-33 UniRef50_C6D3S9 Transcriptional regulator, AraC family n=1 Tax=P... 143 7e-33 UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens ... 143 8e-33 UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=G... 143 8e-33 UniRef50_Q15RK2 Transcriptional regulator, AraC family n=8 Tax=P... 143 1e-32 UniRef50_A6UG08 AraC-type transcriptional regulator domain prote... 142 1e-32 UniRef50_A9GMF7 Transcriptional regulator, AraC family n=2 Tax=P... 142 2e-32 UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiom... 141 3e-32 UniRef50_B1K2F3 Transcriptional regulator, AraC family n=7 Tax=P... 141 4e-32 UniRef50_A6W3U9 AraC-type transcriptional regulator domain prote... 140 5e-32 UniRef50_Q396P4 Transcriptional regulator, AraC family n=1 Tax=B... 140 8e-32 UniRef50_B0T5I6 Transcriptional regulator, AraC family n=1 Tax=C... 139 1e-31 UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=V... 139 1e-31 UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=T... 139 2e-31 UniRef50_C3KMN9 Transcriptional regulator, AraC family n=1 Tax=R... 138 2e-31 UniRef50_B0S9N6 Transcription regulator n=2 Tax=Leptospira bifle... 137 6e-31 UniRef50_C0N265 AraC-type transcriptional regulator N-terminus d... 136 7e-31 UniRef50_C9PHT7 Transcriptional regulator AraC family n=2 Tax=Ga... 136 9e-31 UniRef50_Q65QP8 AraC protein n=7 Tax=Pasteurellaceae RepID=Q65QP... 136 1e-30 UniRef50_A3YHM2 Putative transcriptional regulator n=1 Tax=Marin... 136 1e-30 UniRef50_Q021U2 Transcriptional regulator, AraC family n=1 Tax=C... 135 2e-30 UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=P... 135 2e-30 UniRef50_A0RQF6 Transcriptional regulator, AraC family n=1 Tax=C... 134 4e-30 UniRef50_B8DSD0 Transcriptional regulator, AraC family n=1 Tax=D... 134 6e-30 UniRef50_A4BKJ5 Probable transcriptional regulator n=1 Tax=Reine... 133 1e-29 UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=P... 131 3e-29 UniRef50_C1TR85 Transcriptional regulator, AraC family n=1 Tax=D... 130 5e-29 UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=P... 130 5e-29 UniRef50_B0KFF0 Transcriptional regulator, AraC family n=8 Tax=P... 130 5e-29 UniRef50_D0LTL2 Transcriptional regulator, AraC family n=1 Tax=H... 130 5e-29 UniRef50_Q021L8 Transcriptional regulator, AraC family n=1 Tax=C... 129 1e-28 UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfo... 129 1e-28 UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 ... 129 2e-28 UniRef50_Q2S734 AraC-type DNA-binding domain-containing protein ... 129 2e-28 UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=P... 127 4e-28 UniRef50_A6LZC1 AraC-type transcriptional regulator domain prote... 127 5e-28 UniRef50_UPI000197C8CE AraC family transcription regulator n=1 T... 127 6e-28 UniRef50_A7GXA4 Transcriptional regulator, AraC family n=2 Tax=C... 127 7e-28 UniRef50_D0DBP1 AraC-type transcriptional regulator domain prote... 126 1e-27 UniRef50_A9HXN5 Transcriptional regulator, AraC family n=9 Tax=P... 125 1e-27 UniRef50_A9G5E9 Transcriptional regulator, AraC family n=1 Tax=S... 125 2e-27 UniRef50_B4Y346 Putative AraC family transcriptional regulator n... 125 2e-27 UniRef50_B1KC45 Transcriptional regulator, AraC family n=17 Tax=... 124 3e-27 UniRef50_A3QEE9 Transcriptional regulator, AraC family n=1 Tax=S... 123 1e-26 UniRef50_Q2NVE4 Putative transcriptional regulator n=1 Tax=Sodal... 120 9e-26 UniRef50_A9D252 Transcriptional regulator, AraC family protein n... 120 9e-26 UniRef50_Q6FB96 Putative transcription regulator (AraC family) n... 119 2e-25 UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=S... 119 2e-25 UniRef50_C6ARF6 Transcriptional regulator, AraC family n=12 Tax=... 119 2e-25 UniRef50_A9FZJ5 Transcriptional regulator, AraC family n=1 Tax=S... 118 2e-25 UniRef50_C7DDR7 Transcriptional regulator, AraC family n=2 Tax=R... 116 1e-24 UniRef50_Q82GC0 Putative AraC-family transcriptional regulator n... 115 2e-24 UniRef50_C0A3K5 AraC family transcriptional regulator n=1 Tax=Op... 114 5e-24 UniRef50_A7JPV4 AraC family transcriptional regulator n=2 Tax=Ma... 111 4e-23 UniRef50_Q1J2Q3 Transcriptional regulator, AraC family n=1 Tax=D... 110 5e-23 UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=B... 110 1e-22 UniRef50_B9JLS7 Transcriptional regulator protein n=1 Tax=Agroba... 108 3e-22 UniRef50_B5J4U5 Transcriptional regulator, AraC family protein n... 103 1e-20 UniRef50_C5CNC1 Transcriptional regulator, AraC family n=1 Tax=V... 102 1e-20 UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 T... 98 4e-19 UniRef50_B8Y3J6 AraC n=3 Tax=Actinobacillus pleuropneumoniae Rep... 82 3e-14 UniRef50_D1N3N0 Transcriptional regulator, AraC family n=1 Tax=V... 79 1e-13 UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=M... 76 1e-12 UniRef50_Q2SGY3 AraC-type DNA-binding domain-containing protein ... 75 3e-12 UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein ... 75 4e-12 UniRef50_B8ESK8 Transcriptional regulator, AraC family n=8 Tax=P... 74 6e-12 UniRef50_B9JLR2 Transcriptional regulator protein n=2 Tax=Rhizob... 74 7e-12 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 74 7e-12 UniRef50_C0B5R1 Putative uncharacterized protein n=1 Tax=Coproco... 74 9e-12 UniRef50_UPI00019065BD helix-turn-helix domain-containing protei... 74 9e-12 UniRef50_Q09DL8 Transcriptional regulator, AraC family protein n... 73 1e-11 UniRef50_Q0AK28 Transcriptional regulator, AraC family n=1 Tax=M... 73 2e-11 UniRef50_Q0TS33 Transcriptional regulator, AraC family n=6 Tax=C... 72 2e-11 UniRef50_A6UH43 Helix-turn-helix-domain containing protein AraC ... 72 2e-11 UniRef50_C6B325 Transcriptional regulator, AraC family n=5 Tax=A... 72 2e-11 UniRef50_Q01Y24 Transcriptional regulator, AraC family n=2 Tax=A... 71 6e-11 UniRef50_A6VZ04 Helix-turn-helix-domain containing protein AraC ... 70 7e-11 UniRef50_C6AWA8 Transcriptional regulator, AraC family n=1 Tax=R... 70 9e-11 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 70 9e-11 UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 ... 70 1e-10 UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=G... 70 1e-10 UniRef50_Q0S0T6 Transcriptional regulator n=1 Tax=Rhodococcus jo... 70 1e-10 UniRef50_A6VY86 Helix-turn-helix-domain containing protein AraC ... 70 1e-10 UniRef50_A8ZMX0 Transcriptional regulator, AraC family n=1 Tax=A... 70 1e-10 UniRef50_B7BF73 Putative uncharacterized protein (Fragment) n=1 ... 70 1e-10 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 70 1e-10 UniRef50_A8UP06 Sensor protein n=1 Tax=Flavobacteriales bacteriu... 70 1e-10 UniRef50_C3QVG6 Two-component system sensor histidine kinase/res... 69 1e-10 UniRef50_B5ZFX2 Transcriptional regulator, AraC family n=1 Tax=G... 69 1e-10 UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=C... 69 2e-10 UniRef50_D1BRX4 Transcriptional regulator, AraC family n=1 Tax=X... 69 2e-10 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 69 2e-10 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 69 2e-10 UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminoc... 69 2e-10 UniRef50_C0ZJ95 Probable transcriptional regulator n=1 Tax=Brevi... 69 3e-10 UniRef50_A8L3A5 Transcriptional regulator, AraC family n=1 Tax=F... 69 3e-10 UniRef50_C9XTT1 Putative uncharacterized protein n=1 Tax=Cronoba... 69 3e-10 UniRef50_Q1VS20 Transcriptional regulator, AraC family protein n... 69 3e-10 UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n... 68 3e-10 UniRef50_Q21H00 Transcriptional regulator, AraC family n=1 Tax=S... 68 4e-10 UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=C... 68 4e-10 UniRef50_A9DAF9 Transcriptional regulator, AraC family protein n... 68 4e-10 UniRef50_D2BAU8 AraC family transcriptional regulator n=1 Tax=St... 68 4e-10 UniRef50_C5EPJ4 Predicted protein n=2 Tax=Clostridiales RepID=C5... 68 4e-10 UniRef50_A8RQG1 Putative uncharacterized protein n=2 Tax=Clostri... 68 4e-10 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 68 4e-10 UniRef50_A5V4G7 Transcriptional regulator, AraC family n=1 Tax=S... 68 4e-10 UniRef50_Q099H5 Helix-turn-helix, AraC type:AraC-type transcript... 68 4e-10 UniRef50_A4W931 Transcriptional regulator, AraC family n=2 Tax=E... 68 5e-10 UniRef50_UPI00017895AE two component transcriptional regulator, ... 68 5e-10 UniRef50_A7HFH7 Helix-turn-helix-domain containing protein AraC ... 68 5e-10 UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 T... 68 5e-10 UniRef50_C6B202 Transcriptional regulator, AraC family n=3 Tax=R... 67 6e-10 UniRef50_UPI0001C34C27 transcriptional regulator, AraC family pr... 67 6e-10 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 67 6e-10 UniRef50_B1KKM5 Transcriptional regulator, AraC family n=1 Tax=S... 67 6e-10 UniRef50_A6DMX5 Two-component response regulator n=1 Tax=Lentisp... 67 6e-10 UniRef50_C6W947 Transcriptional regulator, AraC family n=1 Tax=A... 67 6e-10 UniRef50_Q12NJ3 Sensor protein n=1 Tax=Shewanella denitrificans ... 67 7e-10 UniRef50_A5W5M8 Transcriptional regulator, AraC family n=15 Tax=... 67 7e-10 UniRef50_C1I3A1 Response regulator receiver protein n=1 Tax=Clos... 67 8e-10 UniRef50_Q5LIH5 Sensor protein n=16 Tax=Bacteroides RepID=Q5LIH5... 67 8e-10 UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=... 67 8e-10 UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=C... 67 9e-10 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 67 9e-10 UniRef50_A6ES38 AraC-type DNA-binding domain-containing protein ... 67 1e-09 UniRef50_A4F0L2 Transcriptional regulator, AraC family protein n... 67 1e-09 UniRef50_C3WDI9 Two component transcriptional regulator n=2 Tax=... 67 1e-09 UniRef50_Q0JZZ7 Transcriptional regulator, AraC-family n=1 Tax=R... 67 1e-09 UniRef50_C6DED7 Transcriptional regulator, AraC family n=8 Tax=E... 67 1e-09 UniRef50_UPI0001C355CA AraC family regulatory protein n=1 Tax=Cl... 67 1e-09 UniRef50_UPI0001C358FB two component transcriptional regulator, ... 67 1e-09 UniRef50_D1N9J7 Transcriptional regulator, AraC family n=1 Tax=V... 66 1e-09 UniRef50_B3CE13 Putative uncharacterized protein n=1 Tax=Bactero... 66 1e-09 UniRef50_A9FWP2 Transcriptional regulator, AraC family n=1 Tax=S... 66 1e-09 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 66 2e-09 UniRef50_UPI0001789459 transcriptional regulator, AraC family n=... 66 2e-09 UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostri... 66 2e-09 UniRef50_B5XWK6 Transcriptional regulator, AraC family n=5 Tax=K... 66 2e-09 UniRef50_A9CLF9 Transcriptional regulator, AraC family n=5 Tax=R... 66 2e-09 UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=G... 66 2e-09 UniRef50_UPI0001AEBE6B AraC family transcriptional regulator n=1... 66 2e-09 UniRef50_Q392E1 Transcriptional regulator, AraC family n=32 Tax=... 66 2e-09 UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotro... 66 2e-09 UniRef50_B7X2X7 Transcriptional regulator, AraC family n=1 Tax=C... 66 2e-09 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 66 2e-09 UniRef50_B8I947 Two component transcriptional regulator, AraC fa... 66 2e-09 UniRef50_Q15UL8 Transcriptional regulator, AraC family n=1 Tax=P... 66 2e-09 UniRef50_C7PWE8 Transcriptional regulator, AraC family n=2 Tax=A... 66 2e-09 UniRef50_A9CGU4 Transcriptional regulator, AraC family n=2 Tax=A... 66 2e-09 UniRef50_Q7NUP3 Probable transcriptional regulator n=1 Tax=Chrom... 66 2e-09 UniRef50_UPI0001AF4439 helix-turn-helix, AraC type:AraC-type tra... 65 2e-09 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 65 2e-09 UniRef50_A8UJN9 Sensor protein n=1 Tax=Flavobacteriales bacteriu... 65 2e-09 UniRef50_Q2SMH5 AraC-type DNA-binding domain-containing protein ... 65 3e-09 UniRef50_A7MMI8 Putative uncharacterized protein n=1 Tax=Cronoba... 65 3e-09 UniRef50_A8LA37 Transcriptional regulator, AraC family n=1 Tax=F... 65 3e-09 UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_A1KC76 Putative AraC family transcriptional regulator n... 65 3e-09 UniRef50_B5ZZ22 Transcriptional regulator, AraC family n=5 Tax=R... 65 3e-09 UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n... 65 3e-09 UniRef50_A2SEH8 Transcriptional regulator, AraC family n=1 Tax=M... 65 3e-09 UniRef50_B0NUV9 Sensor protein n=3 Tax=Bacteroides RepID=B0NUV9_... 65 3e-09 UniRef50_B5JMW9 Transcriptional regulator, AraC family protein n... 65 3e-09 UniRef50_UPI0001788EF7 two component transcriptional regulator, ... 65 3e-09 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 65 3e-09 UniRef50_Q5QTS9 Predicted regulatory protein containing AraC-typ... 65 3e-09 UniRef50_Q3A690 Transcriptional regulator, AraC family n=1 Tax=P... 65 3e-09 UniRef50_D0C8I5 Transcriptional regulator n=2 Tax=Acinetobacter ... 65 3e-09 UniRef50_C1AVG9 Putative AraC family transcriptional regulator n... 65 3e-09 >UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulator yqhC n=112 Tax=Bacteria RepID=YQHC_ECOLI Length = 318 Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/318 (100%), Positives = 318/318 (100%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA Sbjct: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL Sbjct: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 Query: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK Sbjct: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV Sbjct: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY Sbjct: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 Query: 301 FGVTPGEDAARMRAMQGN 318 FGVTPGEDAARMRAMQGN Sbjct: 301 FGVTPGEDAARMRAMQGN 318 >UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=Gammaproteobacteria RepID=A4THW4_YERPP Length = 297 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 176/290 (60%), Positives = 225/290 (77%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 +I +ADK+ +L + + V++LY RTPVMY P ++I+F GHK+GY+ Sbjct: 6 DIQAQMADKIARLAQGDGLTPSTVSGVKILYSTVHQPRTPVMYTPSVVIIFQGHKVGYLG 65 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 +VF+YD YL+L+VPLPFECET+A+ E+PLAG+ + VD LQ+L+M +G+DE +P Sbjct: 66 SKVFQYDPKNYLILSVPLPFECETFASPEIPLAGISIQVDSQMLQDLMMTMGDDELEKPP 125 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 SG+NSA L+EE+LCA ERLLDVM DAR+LG QI+REILYYVL G CGGAL ALV Sbjct: 126 GNTSGVNSAPLTEEMLCATERLLDVMSIARDARVLGPQIVREILYYVLCGSCGGALQALV 185 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 +R HF+ I++ L+RIEN + +NLSVEQLAAE NMSVSAFHHNFK+VT+TSPLQYLK+YR Sbjct: 186 NRHGHFNQITKTLRRIENHFADNLSVEQLAAEVNMSVSAFHHNFKAVTNTSPLQYLKSYR 245 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LH+ARMM++HDG+KAS AA++VGYESASQFSREFKRYFG TP E A+ R Sbjct: 246 LHRARMMMLHDGLKASTAAIKVGYESASQFSREFKRYFGHTPSEGVAKQR 295 >UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=Pectobacterium carotovorum RepID=C6DIU8_PECCP Length = 329 Score = 345 bits (885), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 168/281 (59%), Positives = 218/281 (77%), Gaps = 1/281 (0%) Query: 35 KLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEY 94 + K + L+P V++LY E R PVMYEP I+I+F G KIGY+ + F+YD Y Sbjct: 41 RCSTKNWATPSLVPQVKILYTEQHHPRVPVMYEPTIVIIFQGQKIGYVGGKTFQYDPENY 100 Query: 95 LLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH-FQPSMAASGINSAT 153 LL+TVPLPFECET A++E PL G+ + +DI LQ+LL+DIG+D+ +P G+NSA Sbjct: 101 LLMTVPLPFECETIASAEHPLVGMAIRIDIQMLQDLLIDIGDDDSAVRPCSCTCGVNSAP 160 Query: 154 LSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 L++EILCA ERLLD M+ P DAR+LG I+REI+Y++L G G AL ALV+R THFS I+ Sbjct: 161 LTDEILCAVERLLDAMDNPRDARVLGPTIVREIIYHMLCGERGAALQALVNRHTHFSQIA 220 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 + L+RIEN Y +NL+VEQLAAE NMS+SAFHHNFK+VT+TSPLQYLK+YRLHKAR+M+I+ Sbjct: 221 KSLRRIENHYADNLNVEQLAAEVNMSISAFHHNFKAVTNTSPLQYLKSYRLHKARVMMIN 280 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +G++A AA RVGYES SQFSREFKRYFG TP ++AAR++A Sbjct: 281 EGLRAGVAAARVGYESVSQFSREFKRYFGATPSDEAARLKA 321 >UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=Pectobacterium RepID=D0KFC4_PECWW Length = 346 Score = 338 bits (866), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 171/313 (54%), Positives = 231/313 (73%), Gaps = 5/313 (1%) Query: 7 QSNC-RIIPKKL--RDMKREEICRL-LADKVNKLKNKENSLSGLLPDVRLLYGETPFART 62 +S C R++ K++ + ++++ R + + + K L+P VR+LY E R Sbjct: 26 ESQCERLVQKQIIQKQTEQQQAARQRIVQQAIRCSTKSWVTPSLVPQVRILYTEQHHPRV 85 Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 PVMY+P I+I+ G KIGY+ + F YD YLL+TVPLPFECET A+ E PL G+ +++ Sbjct: 86 PVMYDPTIVIILQGKKIGYLGGKTFLYDPENYLLMTVPLPFECETIASVENPLVGIAISI 145 Query: 123 DILQLQELLMDIGEDEH-FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 DI LQ+LL+DIG+D+ +P G+NSA L++EILCA ERLLD M P DAR+LG Sbjct: 146 DIPMLQDLLIDIGDDDSAIRPCSCTCGVNSAPLNDEILCAVERLLDTMNNPRDARVLGPT 205 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 I+REI+Y++L G G AL ALV+R THFS I++ L+RI+N Y ++L+VEQLAAE NMSVS Sbjct: 206 IVREIIYHMLCGERGAALQALVNRHTHFSQITKALRRIKNHYADSLNVEQLAAEVNMSVS 265 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 AFHHNFK+VT+TSPLQYLK+YRLHKAR+M+++DG++A AA RVGYESASQFSREFKRYF Sbjct: 266 AFHHNFKAVTNTSPLQYLKSYRLHKARVMMLNDGLRAGVAAARVGYESASQFSREFKRYF 325 Query: 302 GVTPGEDAARMRA 314 G TPG++ R++A Sbjct: 326 GATPGDEVTRLKA 338 >UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=D1UN50_9BURK Length = 379 Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 138/287 (48%), Positives = 187/287 (65%), Gaps = 1/287 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L + + L K+ L V L+ TP R PVMYEP I+I+ G K GY+ ++VF+ Sbjct: 75 LTEVFDMLAPKQGMTRSSLEGVNLMRANTPMPRMPVMYEPSIVIVCQGRKRGYLGDQVFQ 134 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 YDA +YL+L+VPLPFECET A+ P G+ + VD+ + ELLM + E + + G Sbjct: 135 YDAQQYLVLSVPLPFECETEASPGEPFLGISIRVDLTMVAELLMALNETQGTARN-EPLG 193 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 I S L + A +RLL+ + PLDARIL I+REI Y VLTG G A+ A ++ Q H Sbjct: 194 IYSTPLDPALSSAVQRLLEALMSPLDARILAPGIVREICYRVLTGEQGDAIRAALTHQNH 253 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 F I++ L+RI Y L V+ LAAEA MS++ FH FK+VT+TSP+QY+K RLH AR Sbjct: 254 FGRIAKALRRIHADYHGALDVDTLAAEAGMSLAVFHAQFKAVTATSPMQYVKTTRLHHAR 313 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 ++++ DG+ A AAA RVGYESASQFSREFKR FG++P ++ RMRA+ Sbjct: 314 LLMVQDGLNAGAAAARVGYESASQFSREFKRLFGLSPVDEVKRMRAI 360 >UniRef50_Q1H3T0 Transcriptional regulator, AraC family n=27 Tax=cellular organisms RepID=Q1H3T0_METFK Length = 346 Score = 259 bits (663), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 133/303 (43%), Positives = 195/303 (64%), Gaps = 6/303 (1%) Query: 13 IPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIII 72 +P D+ R+ +++ + +L E LL VRL+ + P RTPV+YEP I+I Sbjct: 32 MPHTQPDLSRQA---EMSELIQQLAPHEGHTRSLLDGVRLMRADRPLGRTPVLYEPSIVI 88 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLM 132 + GHK GY+ +RV+ YD YL+L+VPLPF ET A+ E PL + + +D+ + +L++ Sbjct: 89 VCQGHKRGYLADRVYHYDPQHYLVLSVPLPFSSETDASPEEPLLAVSVRLDMTAVADLVI 148 Query: 133 DIGEDEHFQPSMAA-SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 ++ D+ P AA +GI S L + RLL + L+AR+LG I+RE+ + VL Sbjct: 149 EV--DQQASPVPAAPAGIVSTPLDATLADTTVRLLRALRSTLEARVLGPAIVRELCFRVL 206 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 G GGA+ A ++ +F I+RVL+RI N Y + L V+ LA EA +SV AFH +FK+V Sbjct: 207 LGEQGGAIRAALANHGNFGRIARVLRRIHNDYAQPLDVDTLAREAGLSVPAFHAHFKAVA 266 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 +TSP+QY+K+ RLH+AR+M+I D + A+ AA RVGYES SQF+REFKR FG +PGE+A Sbjct: 267 ATSPIQYIKSVRLHQARLMMIRDNVTAAGAAARVGYESPSQFNREFKRLFGRSPGEEARE 326 Query: 312 MRA 314 MR+ Sbjct: 327 MRS 329 >UniRef50_UPI0001744B11 AraC-type transcriptional regulator domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B11 Length = 302 Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 130/269 (48%), Positives = 169/269 (62%), Gaps = 6/269 (2%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LP+VR + +P++Y+P I+I+ G K G + R YD + YL+L VPLPFECE Sbjct: 31 LPEVRFMRSTQHVPNSPIVYDPSIVIIAQGRKTGTFDGRKIIYDPSHYLVLAVPLPFECE 90 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIG--EDEHFQPSMAASGINSATLSEEILCAAER 164 T + PL G+ + V + ELL+ + DE P I+SA L E + A R Sbjct: 91 TEGSLGEPLLGVSIAVKPATVAELLLQMTFIRDEDVAPH----AIDSAGLDEALSEATVR 146 Query: 165 LLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYT 224 LL+ + DARILG Q +RE++Y VL GP G L L + +HF ISRVL R+ YT Sbjct: 147 LLESLRTEEDARILGPQRVREVVYRVLQGPLGHCLRLLAAPDSHFGQISRVLNRLHLDYT 206 Query: 225 ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMR 284 +N V LA EA MSVS FH +FK+VTS+SPLQYLKN RLHKAR +++H+G A AA++ Sbjct: 207 QNHDVTFLAQEAGMSVSTFHAHFKAVTSSSPLQYLKNIRLHKARQLMVHEGANAGVAALQ 266 Query: 285 VGYESASQFSREFKRYFGVTPGEDAARMR 313 VGYESASQFSREFKR FG P +A R+R Sbjct: 267 VGYESASQFSREFKRLFGEGPAAEAERLR 295 >UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF73_HAHCH Length = 320 Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 128/279 (45%), Positives = 172/279 (61%), Gaps = 1/279 (0%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L D +N+ + LP+V P R PV+YEP I+I+ G K GY+ E+ + Sbjct: 31 LFVDLLNQHAKQVGVNHTPLPEVTTFRVVKPSPRQPVVYEPAIVIVGQGGKRGYVGEQTY 90 Query: 88 RYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YDA YL+L+VPLPFECE Y A+ E PL GLR+ VD L L +LL+D+G+ Sbjct: 91 TYDAYNYLVLSVPLPFECEIYEASPESPLLGLRILVDTLALNDLLIDMGDPPSRTSGDIP 150 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 I S L++ ++ A RL+ V+ P +A+ILG QI+REI Y VL G G L A + Sbjct: 151 KSIYSTPLNDTLIEACIRLVKVLSDPAEAKILGPQILREIYYRVLCGDRGETLRAAANHN 210 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + + I++VLK I +Y + L ++ +A ANMS S HHNFK+VT SPLQYLK+ RLH+ Sbjct: 211 SRVAQIAKVLKMIHQQYDQPLDIDTMARAANMSHSTLHHNFKAVTDCSPLQYLKSIRLHQ 270 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 AR ++ G+ AS AAM+VGY S SQFSREFKR FG P Sbjct: 271 ARNLLARGGINASTAAMKVGYVSPSQFSREFKRLFGAPP 309 >UniRef50_D2L3Y8 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3Y8_9DELT Length = 296 Score = 233 bits (593), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 4/291 (1%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 EE+ ++A L +E LP V L R P +Y+PG++IL G K GY+ Sbjct: 3 EELKEIMA----SLAIREGESPSALPGVTFLRHSRSQPRAPALYQPGVVILGQGRKRGYL 58 Query: 83 NERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 V YDAN YL+L VPLP ECE A+ + P+ +RL+VD + +LL+ +G++E Sbjct: 59 GPEVHAYDANNYLVLAVPLPAECEVIASPQEPMLSMRLDVDAAMVADLLLAMGDNEPRTR 118 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 ++ GI L+ ++ AA RL + PLD+R+L + +E+LY VL GG L AL Sbjct: 119 LLSKGGIAPTPLTSDVREAATRLARALASPLDSRVLAPALAKELLYRVLLDAQGGLLRAL 178 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 +RQ F+ I+ +L+RI Y + ++ LA + +MS + H +FK+VT+TSP+QY+K Sbjct: 179 AARQGDFARIADLLRRIHANYATPMEIDALANQIDMSPATLHRHFKAVTATSPMQYVKAI 238 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RLHKARM+++ DG + AA RVGYES SQFSRE+KR+F TP DAAR R Sbjct: 239 RLHKARMLMVADGFGVAMAASRVGYESPSQFSREYKRFFKTTPAADAARWR 289 >UniRef50_A9I0Y6 Transcriptional regulator, AraC family n=72 Tax=Proteobacteria RepID=A9I0Y6_BORPD Length = 349 Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 116/268 (43%), Positives = 172/268 (64%), Gaps = 1/268 (0%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LPD+RLL P PV+Y+PGI+I+ G K GY +++ YD YL + VP+PF E Sbjct: 66 LPDIRLLRSNRPMKNVPVLYDPGIVIVCQGRKRGYFGNQLYLYDDQHYLAVAVPVPFTME 125 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 T A++E PL + +++D +L++ I + P+ G+ S L + + RLL Sbjct: 126 TDASAEEPLLAVYMHLDFKLAADLMLQIDQLGGTAPARP-RGMVSTPLDRRMGESVVRLL 184 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 + + PL+A ILG ++REI ++ LTG G ++ A ++ Q F I+R L+RI + Sbjct: 185 EALGEPLEAPILGPALVREIYFHALTGEQGASMRAALAMQGQFGKIARALRRIHASFHAE 244 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 LSVEQLA EA MSV+ FH +FK+VT +SP+QYLK+ RLH+AR+ ++ +GM A+AA+ VG Sbjct: 245 LSVEQLAREAGMSVATFHTHFKTVTRSSPVQYLKSVRLHQARLHMVRNGMTAAAASAEVG 304 Query: 287 YESASQFSREFKRYFGVTPGEDAARMRA 314 Y+S SQFSREFKR FG +P ++ RM+A Sbjct: 305 YDSPSQFSREFKRLFGRSPVQEVRRMKA 332 >UniRef50_A6W3U1 AraC-type transcriptional regulator domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3U1_MARMS Length = 297 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/283 (39%), Positives = 179/283 (63%), Gaps = 1/283 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L D + L +++ L+ +VRL+ R P++Y PG+ I+ G KIGY+ +R Sbjct: 11 LVDLIKPLVSEDGFCDTLIANVRLMKCAKSLPRMPLIYRPGLTIIVQGQKIGYLGDREIH 70 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 Y++ YL+ T+PLPFECET+A+ + PL G+ +++D + L EL+ + +E S++ Sbjct: 71 YNSGHYLVQTLPLPFECETFASQQEPLLGVSIDIDPVLLSELI-SVPYEEKLNQSISYFP 129 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 ++S +S+E++ + RL+ + P A+I+G+ +RE+++ L P G AL ALV Q Sbjct: 130 MSSVPMSDEMVESVSRLIKALHDPYTAKIMGQSRVREVIFEALQSPQGDALRALVLNQGR 189 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 FSLI LK++ + + + VEQLA +ANMSVS+FHH+FK++ +SPLQYLK RL KA+ Sbjct: 190 FSLIVNSLKQLHLQLDQEVRVEQLAEDANMSVSSFHHHFKNIAGSSPLQYLKRLRLLKAQ 249 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 M++ + S ++ VGY+S QFSR++KRYFG P +D R Sbjct: 250 MLLNQGHLNVSQISLEVGYKSVHQFSRDYKRYFGAPPTKDKLR 292 >UniRef50_C9Y4C2 Uncharacterized HTH-type transcriptional regulator yqhC n=1 Tax=Cronobacter turicensis RepID=C9Y4C2_CROTZ Length = 340 Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 124/297 (41%), Positives = 181/297 (60%), Gaps = 6/297 (2%) Query: 17 LRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 ++ ++RE I L +L +E L VR + ARTPV+YEP I+I+ G Sbjct: 32 MQPVQRETIALL-----EQLAPQEGYTRSQLDAVRFMRSNRALARTPVLYEPCIVIVCQG 86 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGE 136 K GY+ ++++ Y+A+ YL+L+VPLPF ET AT + PL + + +++ + EL++ + + Sbjct: 87 CKRGYLADKIYTYNASHYLVLSVPLPFSTETDATPQKPLLAVAVRLEMTVIAELVLAL-D 145 Query: 137 DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 E + GI S L + RLL + P +A+ILG I++E+ Y VL G G Sbjct: 146 GERGAGAAPPEGILSTPLDAPLADTTLRLLRALSHPQEAQILGPAIVKELYYRVLIGEQG 205 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 GA+ A ++ FS ISRVL+RI Y L V LAAEA MS AFH +FK+VT SP+ Sbjct: 206 GAIRAALASFGKFSRISRVLQRIHADYAGRLDVATLAAEAGMSAPAFHAHFKAVTRNSPV 265 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 QY+K RLH+AR+++I D + A+ AA+RVGYES SQF+REF+R FG TPG + M+ Sbjct: 266 QYIKAVRLHQARLLMIRDNLSAATAALRVGYESPSQFNREFRRLFGRTPGAETREMK 322 >UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLD5_9BURK Length = 290 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 123/274 (44%), Positives = 176/274 (64%), Gaps = 13/274 (4%) Query: 40 ENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTV 99 E++LSG V + AR P +YEP I+I+ G K G+ + ++ YDAN YL+++V Sbjct: 16 ESALSG----VTFMRCNGALARMPALYEPSIVIVIQGTKHGFHDGNIYTYDANHYLVVSV 71 Query: 100 PLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ----PSMAASGINSATLS 155 PLPF+ ET AT+E PL GL + VD ELL+D+ E Q P + AS ++ A L Sbjct: 72 PLPFDVETQATAEKPLLGLIIRVDFEMAAELLLDLKESVVDQGEAVPPLFASRMD-AKLG 130 Query: 156 EEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRV 215 + + RLL++++ P ++R+LG +I+EI Y VLTG G +L S ++ S +++V Sbjct: 131 DSVF----RLLEILQSPTESRVLGSSVIKEITYRVLTGEQGRSLRLAFSSDSYLSRVAKV 186 Query: 216 LKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDG 275 LK I + Y L V LA EANMSV FH +FKSVTS++P+QY+K RLH+AR+M+I G Sbjct: 187 LKLIHSNYHCALDVATLAQEANMSVPTFHAHFKSVTSSTPIQYIKAIRLHQARLMMIRKG 246 Query: 276 MKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + A+ + VGYES SQFSREFKRYFG TP +++ Sbjct: 247 ISAAQVSAMVGYESPSQFSREFKRYFGRTPVQES 280 >UniRef50_Q30WL5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WL5_DESDG Length = 294 Score = 228 bits (580), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 115/266 (43%), Positives = 165/266 (62%), Gaps = 7/266 (2%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LP VR AR P++Y PGI I+ SGHK+ Y+ + FRYD + YL+ +V +PFECE Sbjct: 23 LPGVRFFKETRHVARRPMLYNPGICIVVSGHKVAYVGGQTFRYDVDNYLVTSVAMPFECE 82 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS-----GINSATLSEEILCA 161 ++ + E PL G+ +++DI QL L+ + ++ PS+A S I + + ++ A Sbjct: 83 SFPSQENPLLGMFIDIDIGQLNNLISMMERQDN--PSVAVSNGRQLAIGPSAMDADMKDA 140 Query: 162 AERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIEN 221 A +L+ ++ +ARILG ++RE+ Y L G L +LV FS ++R++ +E Sbjct: 141 AVKLVKALQSEQEARILGPGLVREVYYRALCGNQAPVLYSLVRGSGSFSQVARIIHMMEG 200 Query: 222 KYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAA 281 Y+E ++QLA +MSVSAFH FK +T+ SPLQYLK RL +AR +I+ GMKA A Sbjct: 201 SYSEKFDIQQLADSVHMSVSAFHKAFKDITADSPLQYLKKIRLSRARDLIVQQGMKAYLA 260 Query: 282 AMRVGYESASQFSREFKRYFGVTPGE 307 A VGYES SQFSREFKRYFG +P E Sbjct: 261 ADEVGYESPSQFSREFKRYFGRSPAE 286 >UniRef50_Q88K66 Transcriptional regulator, AraC family n=4 Tax=Pseudomonas putida RepID=Q88K66_PSEPK Length = 301 Score = 222 bits (566), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 119/282 (42%), Positives = 166/282 (58%), Gaps = 3/282 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L + L + + LLP V++L + A +P +YEP ++I+ G K+ + R Sbjct: 13 LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG--EDEHFQPSMAA 146 Y A YL+ + +PF CET+AT E PL G+ + +D L EL+ +G D Q Sbjct: 73 YGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTPQ 132 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 S + SA L + + ERLL ++ PLDA++LG +RE+LY L GP G L ALV +Q Sbjct: 133 S-MTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQ 191 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 HF+ I L + Y E LSVE LAA ANMSVS FH +FK T +P+QYLK RL K Sbjct: 192 GHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLK 251 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 A+ M+I +G+ + AA RVGY+S SQFSRE+KR F +PG++ Sbjct: 252 AQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDE 293 >UniRef50_C4XTV7 AraC family transcriptional regulator n=5 Tax=Bacteria RepID=C4XTV7_DESMR Length = 294 Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 119/292 (40%), Positives = 170/292 (58%), Gaps = 8/292 (2%) Query: 20 MKREEICRLLAD-KVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 M+ +I LL ++ E+ L+G VR P R P++Y PGI I+ GHK Sbjct: 1 MQMPKIVELLGKFQITDGGATESRLTG----VRFFKDTQPVPRRPMLYNPGICIVAQGHK 56 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 IGY+ FRYDA+ YL+ +V +PFECET+A+ + PL GL +++D+ QL +L+ + E Sbjct: 57 IGYLGGHTFRYDADNYLVTSVAMPFECETFASQDDPLLGLYIDIDMAQLHDLIGQMALQE 116 Query: 139 H---FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + GI +T+ E++ A +LL + +A+IL ++REI Y L G Sbjct: 117 EVGKLGENDFPLGIGPSTMDEDMRDAVIKLLKALWTETEAKILAPGLVREIYYRALRGTQ 176 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 L +L F+ + R +K +++ Y++ L +E LA ANMSVSAFH FK +T SP Sbjct: 177 APVLYSLARGNGSFAQVGRTIKMMQSNYSKKLEIEDLATTANMSVSAFHKAFKEITCDSP 236 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 LQYLK RL +AR +I+ KA AA VGYES SQFSREFKRYFG +P + Sbjct: 237 LQYLKKIRLSRARDLIVQQKAKAYMAASEVGYESPSQFSREFKRYFGHSPAD 288 >UniRef50_Q1QZB6 Transcriptional regulator, AraC family n=10 Tax=Gammaproteobacteria RepID=Q1QZB6_CHRSD Length = 306 Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 113/282 (40%), Positives = 170/282 (60%), Gaps = 7/282 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA ++ L +E + LP V+L+ ARTP+MYEP ++I+ G+K GY+ +R+ Sbjct: 21 LASRLAPLATQEGFAATPLPGVQLITSHCGHARTPLMYEPSLVIIVQGNKTGYLGDRIIH 80 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELL--MDIGEDEHFQPSMAA 146 Y A YL+ +PLPFECET+A+ PL GL +++D+ L EL+ + MAA Sbjct: 81 YGAGHYLIQAMPLPFECETHASDTAPLLGLSVSLDMAMLGELVRRLPTAPPTRMPAPMAA 140 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 ++ A + + ++ RL+D + A LG IRE+L+ L GP G +L LV+ Sbjct: 141 VDMD-ADMGDSVM----RLIDCLHDHEQAAALGDGRIREVLFAALRGPQGASLRQLVAHH 195 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 +S I+ L + +Y ++L+VE LA NMS S FHH+FK T +P+QYLK RL K Sbjct: 196 GQYSRIAEALTFLHQQYAQSLNVESLARRVNMSASHFHHHFKRTTQLAPMQYLKRLRLLK 255 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 AR+++ G + + AA +VGY+SASQFSR++KRYFG +P +D Sbjct: 256 ARVLLTQQGYQVAQAATQVGYQSASQFSRDYKRYFGQSPLDD 297 >UniRef50_Q1ZUN2 AraC-family trancriptional regulator n=2 Tax=Photobacterium RepID=Q1ZUN2_PHOAS Length = 304 Score = 213 bits (543), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 107/273 (39%), Positives = 166/273 (60%), Gaps = 1/273 (0%) Query: 35 KLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEY 94 K+ ++ N + LL VRL + TP MYE GI+++F G KIG++N+ F YD + Sbjct: 21 KISDQTNRVHTLLTGVRLFRIDRYHKLTPKMYEQGIVVIFQGSKIGHLNQHQFGYDVEQC 80 Query: 95 LLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG-EDEHFQPSMAASGINSAT 153 L+++ P CET+A+ + PL G+ +++DI + +L+ D+ E +++ G++ A Sbjct: 81 LIVSTSYPITCETFASQQEPLMGINIDLDINAISQLVSDMELESKNWGELDTRCGVSPAP 140 Query: 154 LSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 ++E + LL+V+ PLDA++LG I+R+ YY+L G L + + + IS Sbjct: 141 MTESMYLCMLELLNVLHNPLDAKVLGPSILRQFFYYLLQSEKGYLLAHYCEQDSSLAKIS 200 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 V+ ++ + + L V +LAA A MSVS FH FK V + PLQY+K RL+ A+ I+ Sbjct: 201 TVIGHVQKNFAQKLHVNELAAMAGMSVSVFHKVFKQVVTDPPLQYIKKIRLNHAKNYILQ 260 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 +G+ AS A+ RVGYESA+QFSREFKRYFGV P Sbjct: 261 EGLSASLASQRVGYESAAQFSREFKRYFGVPPS 293 >UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio RepID=B8DKQ8_DESVM Length = 292 Score = 210 bits (534), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 117/281 (41%), Positives = 167/281 (59%), Gaps = 5/281 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 +A+ ++KL E LP V L RTP++Y+ G+IIL G K+ + RV++ Sbjct: 4 IAELMSKLAINEGKTETGLPGVGLYRTSGSIHRTPLLYQQGLIILGQGAKLVHFGGRVYQ 63 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE----HFQPSM 144 YD + YL L+VP+ ECE AT E PL L +++D+ L +L+ I ED Sbjct: 64 YDQDHYLALSVPIAAECEAVATPEKPLLSLVVDIDLGVLNQLIGQI-EDRIDYRSLTQGC 122 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 G+ A +RLL + PL+A++LG ++RE+L+ VL G AL AL + Sbjct: 123 THQGLFLAKADAAFRNTVQRLLLALSCPLEAQVLGPGLVRELLFRVLCGENAAALHALAT 182 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + T+ S I + LK+I ++E +V+QLA NMS S FH FK VT+ SP+QYLK RL Sbjct: 183 KNTNMSRIEKALKQIHGNFSEPFNVDQLAGFVNMSPSTFHRAFKDVTAFSPIQYLKRVRL 242 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +KAR ++ DG++AS AA VGYES SQFSREF+RYFG++P Sbjct: 243 NKARSLLREDGVRASEAARMVGYESVSQFSREFRRYFGISP 283 >UniRef50_Q5E474 Predicted DNA-binding transcriptional regulator n=23 Tax=Gammaproteobacteria RepID=Q5E474_VIBF1 Length = 294 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 108/273 (39%), Positives = 164/273 (60%), Gaps = 9/273 (3%) Query: 41 NSLSGL----LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLL 96 N L G+ +P V R P +Y+ GII+L GHK YI + Y ++YL+ Sbjct: 18 NDLEGIKETAIPGVWFYRSSKGNQRQPFVYQSGIIVLGKGHKNIYIGNQPVHYGPDDYLV 77 Query: 97 LTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS----GINSA 152 + VP+P ECE + + PL GL ++VD L L+ ++ E+ FQP + S G+ S Sbjct: 78 VGVPMPLECEAFPENGEPLLGLSIDVDSALLHRLVNEL-EEAKFQPCIQTSSDGFGLTSV 136 Query: 153 TLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI 212 ++ ++L + +RL+ + LD ++LG+ ++ EI+Y VLTGP G L L + ++ + Sbjct: 137 KMANDMLESCKRLMAALHTDLDTKMLGEALLTEIVYRVLTGPEGHVLFNLAHHDSQYARV 196 Query: 213 SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMII 272 ++ + ++ Y +L+V+ LA EANMSVSAFH F+ +T SPLQYLK RL+KA+ +I Sbjct: 197 AKAMNKMHQSYANSLTVQNLAEEANMSVSAFHSAFRKITLESPLQYLKKVRLNKAKELIQ 256 Query: 273 HDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +G + + AA VGY S SQFSREFKR+F VTP Sbjct: 257 LEGKRVNDAAHLVGYTSTSQFSREFKRHFNVTP 289 >UniRef50_Q15PL3 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15PL3_PSEA6 Length = 296 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 107/284 (37%), Positives = 162/284 (57%), Gaps = 4/284 (1%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + A+K L N E + L VR R P++Y+ GIII+ G K+ + + Sbjct: 9 HVFAEKAGLL-NLEGHVETALSGVRFFRASKGSPRQPLVYQSGIIIVVQGRKVIHFPDHH 67 Query: 87 FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 +Y A +YL+L VP+P ECE + + +P+ GL ++V L +L+ + + + + S Sbjct: 68 IQYGAGDYLVLGVPMPLECEAFVDNGLPIMGLSIDVKPALLHQLVNHMQQHQRYTQSEPC 127 Query: 147 SGIN---SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 S I+ +A + + +RLL V+ P++ I G +++E++Y VL GP G L L Sbjct: 128 SQISCAQAAKVDAPLEHTIQRLLAVLANPVETDIFGADVVKELVYRVLCGPQGKTLFGLA 187 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 H++ ++R L + Y ++VE LA + NMSVSAFH FK VT SPLQYLK R Sbjct: 188 QHDGHYARVARALASLHANYASPITVETLADDVNMSVSAFHRAFKQVTFESPLQYLKKVR 247 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 L KA+ +I +G +A+ AA +VGY SASQFSREFKR+F +P E Sbjct: 248 LVKAKDLITANGSRANEAAFQVGYTSASQFSREFKRHFNQSPSE 291 >UniRef50_A9AC46 AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AC46_BURM1 Length = 295 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 24/281 (8%) Query: 34 NKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANE 93 +L E + VR + P R PV+YEP I+++ G K+GY+ ER F YDA + Sbjct: 23 TRLAPDEGDTPAAIDGVRFIRVSRPAPRLPVLYEPSIVVVCQGRKLGYLGERSFVYDAQQ 82 Query: 94 YLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA-ASGINSA 152 YL +++ VD+ + EL + + DE +++ G+ S Sbjct: 83 YLAISI---------------------RVDLAVIAELAILL--DETLGAAVSEPHGVYST 119 Query: 153 TLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI 212 L + A RLL+ + P D R+LG I+REI Y VLTG G A+ A + +Q HF I Sbjct: 120 PLDAPLADAVLRLLETLASPHDTRVLGPSIMREIAYRVLTGAQGDAIRAALVQQHHFGRI 179 Query: 213 SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMII 272 ++ L+RI +L VE LA EA MS++ FH FK VT+TSP+QY+K RLH+AR+M++ Sbjct: 180 AKALRRIHADLQADLDVETLAREAGMSLAVFHAQFKHVTATSPMQYVKTARLHQARLMMV 239 Query: 273 HDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +G+ A AAA RVGY SASQFSREFKR FG +PG++ MR Sbjct: 240 QNGLGAGAAAARVGYASASQFSREFKRLFGRSPGDEVRAMR 280 >UniRef50_Q089X8 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=Q089X8_SHEFN Length = 289 Score = 187 bits (474), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 113/291 (38%), Positives = 169/291 (58%), Gaps = 11/291 (3%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 EI L+A K + LSG+ YG AR P+ Y G++I+ G K Y++ Sbjct: 3 EIATLMAQLAPKEGVNDTHLSGVHVFRSSQYG----ARGPMCYSQGVLIVGQGKKRVYLD 58 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ-- 141 + F YD L++TVPLP ECET+A+ E P+ L +++D++QL ++ + DEH Q Sbjct: 59 NQTFEYDRQHSLVMTVPLPVECETFASIEEPVLVLMVDIDLVQLNYIIRLM--DEHHQIP 116 Query: 142 ---PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 SG A +E++ C RLL ++ PL+A+++G+ ++ E+LY +L P Sbjct: 117 KDLNESRQSGFFVADNTEDMDCCVIRLLQALQSPLEAKVMGEALVLELLYRLLDSPDAAP 176 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L AL T S + + L I Y E++ V+ LA+ NMS SAFH +FK VT++SP+QY Sbjct: 177 LYALSLSHTRLSRVEKALNYIHKHYGESVEVDTLASLVNMSPSAFHRSFKEVTASSPIQY 236 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 LK RL+KA+ ++ +K + +VGYES +QFSREFKRYF +PGE A Sbjct: 237 LKKIRLNKAKALLQLQNLKVKEVSTQVGYESTAQFSREFKRYFDQSPGECA 287 >UniRef50_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAD1_9RHOB Length = 294 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 103/267 (38%), Positives = 155/267 (58%), Gaps = 5/267 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LP VR+ + P R P++Y III+ G K Y+ + F+YD N YL++ +PL FEC Sbjct: 28 LPGVRVFHSTVPLPREPLVYGSSIIIIGQGRKSLYLGDLSFQYDENNYLVVGLPLAFECS 87 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 T A+ E PL+GL +++D L EL+ + +D + G +S+ + ERL Sbjct: 88 TEASPENPLSGLVVDLDTSLLLELINKV-DDPVVSNTTTKLGAEPVAMSDHMQDVVERLT 146 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 + P+D +LG ++RE+ Y L G L L ++ + I+RVL+++ Sbjct: 147 ACLLSPVDTSVLGAGLVRELHYRALNDRHGSVLRMLSNQGNPSARIARVLQKLSGNLAGK 206 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 SV+QLA E MS SAF+ F+S T +P+QYLK RL+ AR +I+++G +A+ AA +VG Sbjct: 207 YSVDQLAKEIGMSSSAFYRAFRSTTGETPVQYLKKLRLNHARSLILYEGKRANEAATQVG 266 Query: 287 YESASQFSREFKRYFGVTPGEDAARMR 313 YES SQFSR+FK +FG T AA+ R Sbjct: 267 YESLSQFSRDFKVHFGTT----AAKAR 289 >UniRef50_C9P783 AraC-type DNA-binding domain-containing protein n=3 Tax=Vibrionaceae RepID=C9P783_VIBME Length = 302 Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 166/290 (57%), Gaps = 6/290 (2%) Query: 21 KREEICRLLADKVNK--LKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 ++ ++ +L+ + V+K L + E +P V +R P +Y+ GI+IL G K Sbjct: 7 EKPDLAQLMQNYVDKYALHHLEGCTDTAIPGVWFYRSSQGNSRQPFIYQSGIVILGQGQK 66 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 ++ Y N+YL++ VP+P ECE A PL GL +++D L + + + E+ Sbjct: 67 RIHLGANAVDYGPNDYLVVGVPMPLECEAVAKQNQPLLGLTIDIDHSLLLKQVAAL-EEN 125 Query: 139 HFQPSMAAS---GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 F+P + A+ G+ S ++ +L + +RL++ + L+A +LG ++ E+ + LT Sbjct: 126 GFKPPVDANNPCGLKSVQMNHTMLNSCKRLMNALIDGLEAELLGGSLLEEMAFRALTSLE 185 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L L + H++ I++ L ++ Y +L+V LA EANMSVSAFH F+ VT SP Sbjct: 186 GHVLFELAHHEGHYARIAKALSKVHRDYATSLTVNTLAEEANMSVSAFHQAFRGVTMESP 245 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 LQYLK RL+KA+ +I +G + + AA VGY S SQFSRE+KR+F TP Sbjct: 246 LQYLKKVRLNKAKELIQIEGKRVNDAARLVGYSSPSQFSREYKRHFNHTP 295 >UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGU5_9DELT Length = 301 Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 99/278 (35%), Positives = 153/278 (55%), Gaps = 2/278 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA ++ +L E S +P +R+ P V Y+P + ++ G K + + Sbjct: 13 LAARIERLAVGEGSTETAVPGLRVFRATEPVGPFAVEYQPCLCVVGQGRKAATVGAQTCE 72 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 YD ++YL++ +PLP A+ E P + L +D+ +L +LLM + DE ++ Sbjct: 73 YDPDQYLVVALPLPVSARIIEASREQPFLSMVLAIDVAELGQLLMAM-PDEPEPERAPST 131 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 + +++ + A RLL E P +AR+LG I+REIL++VL G G L +L R Sbjct: 132 AMWVSSIEPRLRDAVLRLLQAAEDPTEARVLGPGIVREILFHVLGGDQGALLRSLALRNG 191 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H + R ++ +++ Y + L V +A +S S H FK VT SP+QYLK RLH+A Sbjct: 192 HGQRVVRAIRFMQDHYEQALDVATIAKSVGVSASRLQHVFKDVTGLSPIQYLKRVRLHRA 251 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +MI+ +G+ A AA RVGY S SQFSREFKR FG++P Sbjct: 252 HVMILTEGLGAGEAAFRVGYGSPSQFSREFKRQFGLSP 289 >UniRef50_B6R5M8 AraC-family trancriptional regulator n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5M8_9RHOB Length = 262 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 142/253 (56%), Gaps = 2/253 (0%) Query: 64 VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNV 122 VMY P I I+F G G++ + F Y Y L P+P E E A+ E PL + L + Sbjct: 10 VMYSPSIRIVFQGLVRGHLGSQSFLYSQQSYAALVSPIPLEIEIVEASPEKPLYAVNLAI 69 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQI 182 DI L EL++ I E E + A LSEE L + RL+ + +IL Sbjct: 70 DINVLAELMLLI-EQEPLEFEYGEMLGRPAHLSEEALFSVCRLMQTLNSEEQTKILADGY 128 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 RE LY+VL G +L L I+RVL+ + ++ NLSV+Q+A A MS+SA Sbjct: 129 YREFLYHVLKSEYGASLRVLFQNSEKSQGIARVLQVLHEDFSTNLSVDQMAKMACMSISA 188 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 FH FK T SPLQY+K+ RLHKAR M++ M AS AA RVGY S SQFSREFKR+FG Sbjct: 189 FHAGFKGATGLSPLQYVKSIRLHKARSMMLSQNMSASQAAYRVGYASPSQFSREFKRFFG 248 Query: 303 VTPGEDAARMRAM 315 +P ++AA+ R + Sbjct: 249 SSPTQEAAKFRVV 261 >UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWP6_DESAD Length = 302 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/259 (36%), Positives = 158/259 (61%), Gaps = 2/259 (0%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 ++P++YE I GHKI ++++ F Y +E+L++ +P + E + PL + + Sbjct: 44 KSPLIYEQCFCIAVYGHKICHLSDATFTYGEDEFLVVPAIVPLDIEVVPDVDNPLLSITV 103 Query: 121 NVDILQLQELLMDIG--EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 +D +Q+L+ I + + + ++SGI L+ ++ + RLL V++ +A I Sbjct: 104 PLDFEVIQDLVEFINKYDKQALEKISSSSGIYFEPLTNNVMESTIRLLKVLKSRKEANIF 163 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 GKQIIREI Y++L G G L + ++ ++LI++ L+ + + Y + + ++ LA ANM Sbjct: 164 GKQIIREIYYHILMGKHGHLLASAAFGESDYALIAKSLRFLHDNYDKGIDIDHLAKSANM 223 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 SV +F+++FK+VT+ +P+QYLK RL KAR ++ G +AS+AA VGYES SQFSREFK Sbjct: 224 SVRSFYNHFKAVTALTPVQYLKRIRLEKARQFMVVQGEQASSAAHMVGYESPSQFSREFK 283 Query: 299 RYFGVTPGEDAARMRAMQG 317 R+FG TP E + M G Sbjct: 284 RHFGYTPREAVRNSQGMAG 302 >UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein n=2 Tax=Acinetobacter RepID=C0VLQ6_9GAMM Length = 291 Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 158/274 (57%), Gaps = 4/274 (1%) Query: 35 KLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEY 94 KL KE + + + L+ + V+ EP ++ + G K GYI + + E Sbjct: 13 KLIAKEGFFATAIDGITLMRVDHNTPPLAVLQEPTLVFVLQGSKRGYIGTETYAFQQGEC 72 Query: 95 LLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG-EDEHFQPSMAASGINSAT 153 L+++V +PF+C+T A+ E+P+ + + ++ + ELL E++ F+P +G++ Sbjct: 73 LIVSVSMPFDCDTVASPELPMIAMIMKLEADTVNELLAKTYLENDKFKP--LTTGMSVIQ 130 Query: 154 LSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 E I RLL + D+ ILG+QI RE+LY V+ AL LV Q + I Sbjct: 131 YDETISNVLIRLLKTLSSEQDSLILGEQIKRELLYRVIQHSGADALTGLVV-QGNLRQIY 189 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 ++ + I++ +TE L+VE LA +ANMS+SAFH FK VT SPLQYLK RLHKA+ M+ + Sbjct: 190 KICEYIQHHFTEKLTVEMLAEQANMSISAFHKAFKQVTLHSPLQYLKVTRLHKAKQMLQN 249 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + + AA VGY+S+SQFSREFK+ FG +P + Sbjct: 250 ENQSVAQAAYAVGYQSSSQFSREFKKQFGFSPNQ 283 >UniRef50_UPI00016AE94B transcriptional regulator, AraC family protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE94B Length = 282 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 41/267 (15%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LP VR+L +RTPV+Y+PGI+I+ G K GY ++++ YD YL P E Sbjct: 39 LPSVRVLRSNRALSRTPVLYDPGIVIVCQGRKRGYFGDQLYLYDERHYLACA---PKRME 95 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 A + S L + + + R L Sbjct: 96 --------------------------------------APRSMTSTPLDDAMQTSVLRFL 117 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 + M RPL+A +LG+ ++RE+ + VLTG GG++ ++ + F I R L+ I Y + Sbjct: 118 EAMHRPLEAAVLGQGLLRELYFRVLTGAQGGSMREALAMRGQFGRIGRSLRLIHAAYAQP 177 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 L V +LA EA MS+ +FH +FK++T SP+QY+K+ RLH+AR++++ + A AA VG Sbjct: 178 LDVPRLAEEAGMSIPSFHSHFKAITQVSPMQYVKSTRLHQARLLMLRHDLTAEAAGHAVG 237 Query: 287 YESASQFSREFKRYFGVTPGEDAARMR 313 Y SASQF+REFKR F +TP +A RMR Sbjct: 238 YTSASQFTREFKRLFDLTPAAEAKRMR 264 >UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5P8_VIBHO Length = 293 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/263 (38%), Positives = 145/263 (55%), Gaps = 3/263 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P ++L ++P P++ +P I + K ++ + Y A+ YL+ +V P E Sbjct: 23 IPGLKLYASQSPIVLMPIVLQPSICFVLQAKKRVATGQQAYVYSADSYLINSVTRPVEAS 82 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGIN-SATLSEEILCAAER 164 T P G LN+D + +L+M++ + S SG SA ++ EI A R Sbjct: 83 LLDVTDSHPYVGFSLNIDQQMVGQLMMEMTRWQKEMYSAPQSGFTQSAPITPEISNIASR 142 Query: 165 LLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYT 224 LL ++ +D IL I RE+ Y VL GP GG L VS T + I+ V+ IE + Sbjct: 143 LLGLLNDEMDKEILAPSICRELYYAVLKGPGGGLLRNCVSNHTGANRIAPVVHYIEQNFE 202 Query: 225 ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMR 284 NL++E++A+ A MS S H +FK VT+ SP+QY+K+ RLHKAR M + G + + Sbjct: 203 RNLTIEEIASVAGMSASTLHDHFKQVTTVSPMQYVKSLRLHKARSM-LSVGYQVAEVCYG 261 Query: 285 VGYESASQFSREFKRYFGVTPGE 307 VGY S SQFSREFKRYFGVTP E Sbjct: 262 VGYSSPSQFSREFKRYFGVTPSE 284 >UniRef50_B0SVQ8 Transcriptional regulator, AraC family n=8 Tax=cellular organisms RepID=B0SVQ8_CAUSK Length = 323 Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 108/289 (37%), Positives = 160/289 (55%), Gaps = 12/289 (4%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 EE+ RL A N+ + +G+ P + ++ G P +YEP I ++ G K I Sbjct: 6 EELRRLAARAENR-----RTETGI-PRLAMVRGAIPEHELAAVYEPMINLILQGSKSMTI 59 Query: 83 NERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + RYD Y +++V LP + A++ P + L ++ + +L D+ + Q Sbjct: 60 GGQTLRYDPATYFVMSVDLPAIGAVHSASTGEPYLAVSLTLEPSVIAAIL-DLAQPSAGQ 118 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 SG + AT++ E+L A RL+ +MERPLD +LG RE+LY VL GP G L Sbjct: 119 ----GSGFSVATVTPELLDAWVRLMGLMERPLDIAVLGPGYEREVLYRVLQGPQGWMLRD 174 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + T S I ++ I + + L +E LA + MSVSAFH FK+VT+ SPLQ+ K Sbjct: 175 IATPDTALSRIHAAVRWIRENFNKPLRIEDLARQVAMSVSAFHRQFKTVTNMSPLQFQKT 234 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 RL +AR ++ + + A+A A RVGYESASQFSRE+ R FG +P DAA Sbjct: 235 IRLMQARRLMTTEALGAAAVATRVGYESASQFSREYARLFGRSPARDAA 283 >UniRef50_Q1MYY9 AraC-family trancriptional regulator n=1 Tax=Bermanella marisrubri RepID=Q1MYY9_9GAMM Length = 300 Score = 173 bits (439), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 102/269 (37%), Positives = 150/269 (55%), Gaps = 5/269 (1%) Query: 46 LLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC 105 LLP V+L + + P+MY+ G+ + G K G + F YLLL+ +P EC Sbjct: 25 LLPHVKLYVLDQYQSACPLMYDSGLFFVLQGSKRGKAAGQEFSTSPQTYLLLSNTMPVEC 84 Query: 106 ETYATSEVPLAGLRL--NVDILQLQELLMDIGEDEHFQPSMAASG---INSATLSEEILC 160 ET A + P+ G+ + N D + Q +M+ + Q S AA INS + + + Sbjct: 85 ETLAQPDEPVVGIYVAFNRDEISRQVHIMESHKIRGEQESDAAEQLNVINSMSTPDRLAV 144 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 +L + M P ILG + ++ Y VLTGP L VS + FS ++R ++ ++ Sbjct: 145 LVSQLAEAMLDPCQLEILGPSFVNQLYYQVLTGPGYHTLKQWVSADSKFSAVTRSIEYMQ 204 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 + T+ +SV+ LA+ A MSVSA+HH FK VT SPLQ+LK RL +A+ +++ + AS Sbjct: 205 SNLTKRISVDDLASIAGMSVSAYHHYFKQVTGVSPLQHLKQLRLVRAKDLLVQQKLSASQ 264 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDA 309 A VGYES +QFSREFKRYFGV P + A Sbjct: 265 TAFDVGYESPNQFSREFKRYFGVPPSKAA 293 >UniRef50_B3E2X9 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=B3E2X9_GEOLS Length = 314 Score = 173 bits (438), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 161/274 (58%), Gaps = 2/274 (0%) Query: 46 LLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC 105 ++P + L P +YEPG+ ++ G K + + +RYDA YL+ +V LP Sbjct: 39 VIPGLALFRRTEPTEPVSGIYEPGVCLIAQGAKRVMLGDDRYRYDAQHYLITSVHLPTIV 98 Query: 106 ETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER 164 + A+ E P GLRL D+ ++ +L++D + +P ++ G+ + ++ +++ A R Sbjct: 99 QVIEASPEKPYLGLRLTFDLREVSQLMVDSNLPQP-RPQQSSRGMATGQVTLQLVNAFIR 157 Query: 165 LLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYT 224 L+D++ D IL I REI+Y +L G G L + + + I++ + +++ Y+ Sbjct: 158 LIDLLADEKDIPILAPVIQREIIYRLLVGDQGERLRQIATAGSQSQQIAKAIGWLQSNYS 217 Query: 225 ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMR 284 +++S++QLAA+ NMS S FHH+F+S+T+ SPLQY K RL +AR +++ + M A+ AA + Sbjct: 218 QSISMDQLAAQTNMSTSTFHHHFRSLTALSPLQYQKQLRLQEARRLMLAERMDAANAAFQ 277 Query: 285 VGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 VGYES SQF+RE+ R FG P D +R + + Sbjct: 278 VGYESPSQFNREYSRMFGAPPLRDITSLRQLAAD 311 >UniRef50_B2IB97 Transcriptional regulator, AraC family n=5 Tax=Rhizobiales RepID=B2IB97_BEII9 Length = 318 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 147/272 (54%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 L VR+L E PV+Y+PG I + G K G + V+ YD YL ++VP+PF E Sbjct: 45 LQGVRILRTEAVLHDVPVLYKPGAIFVLQGRKQGVLEGEVYLYDEEHYLAVSVPVPFRME 104 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 + A+ E PL + + D+ E+ ++G + S+ + I RLL Sbjct: 105 SVASPERPLLAVYVEFDMRLAAEIASEVGARHARSTVGKVKSLVSSRMEPAIEDVVLRLL 164 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 + P++ ILG I+RE+ Y VL GP GGA+++ + + I + L R+ Y+ Sbjct: 165 RALHDPVELTILGSGILRELHYRVLVGPQGGAMISALQQCGTSGRIVQSLARLRETYSSE 224 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 + V LA EA MSV ++H +FK++T +SP+QY+K RLH+AR+M+ + A VG Sbjct: 225 ILVAALAGEAGMSVPSYHVHFKALTGSSPIQYVKAMRLHEARLMLARQDKTIAEVAASVG 284 Query: 287 YESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 Y S +QFSR+FKR+F T E+A +R G Sbjct: 285 YASPAQFSRDFKRHFRRTASEEAEWVRRHLGE 316 >UniRef50_Q15TL4 Transcriptional regulator, AraC family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15TL4_PSEA6 Length = 301 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 101/293 (34%), Positives = 159/293 (54%), Gaps = 13/293 (4%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFART-PVMYEPGIIILFSGHKIGYINERVF 87 L KV +L E + +P + L +TP PV+Y+P I ++ G K Y+ + + Sbjct: 4 LIKKVFELAPHEGDFNTSVPHLSLFRRDTPTTSPMPVIYQPSIYMVLLGSKAAYLGKERY 63 Query: 88 RYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMDIGEDEHFQPSMA- 145 +YD YL+ VPLP E + SE P R++++ + ELLM + DE P A Sbjct: 64 QYDPMHYLVSCVPLPLEGQILQASEQRPYLAARISLETHMINELLMQM-PDEPEAPVTAI 122 Query: 146 ---------ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + GI + ++ +I RLLD A +LG+ ++E++Y++L G Sbjct: 123 DIQSNDGTSSRGIYVSKMNTDIQHTLSRLLDCAHSTTKAHVLGQLALKELIYHILNAEHG 182 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L A + I+ VL+ I Y ++ + LA++ANMS S+F+H+FK+ T+TSP+ Sbjct: 183 SLLRAFACQDRQQYHIANVLQFINRHYASSMDIATLASKANMSESSFYHHFKAATNTSPI 242 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 QY+K RLH A+ ++ + A++AA VGY SASQFSRE++R F V P +DA Sbjct: 243 QYIKMVRLHAAKRKMMFEQHNATSAAFEVGYTSASQFSREYRRLFSVPPAQDA 295 >UniRef50_Q4ZQJ7 Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZQJ7_PSEU2 Length = 295 Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 99/250 (39%), Positives = 141/250 (56%), Gaps = 4/250 (1%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVD 123 +Y+P + ++ G K I E RY A Y L+ V +P + +A T + P + L +D Sbjct: 39 VYQPMLHLVLQGTKTLSIGEDASRYTAGHYFLVPVDVPATGQIHADTPDKPYLAVSLTLD 98 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 + LLM G + G+ + +E++ A R+L +M+RP +A IL I Sbjct: 99 PEVIATLLMAEGRAPEAPQNACFEGVIA---PDEMIDAWLRMLRLMDRPHEAAILAPMIE 155 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 REIL+ L GP GG L + + I RV + I YTE VE LA A+MSV+AF Sbjct: 156 REILFRALQGPLGGILRDVARPDGRLTQIRRVTQWIGEHYTEPFRVEPLAQMADMSVAAF 215 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 + +FKSVT+ SP+QY K RL KAR +++ D + A++ A VGYESASQF+RE+ R FG+ Sbjct: 216 YRHFKSVTAMSPIQYQKRLRLLKARWLLLFDTLDATSIAYAVGYESASQFNREYARLFGL 275 Query: 304 TPGEDAARMR 313 P DAAR R Sbjct: 276 PPARDAARFR 285 >UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteobacteria RepID=B4EQD3_BURCJ Length = 338 Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 158/295 (53%), Gaps = 3/295 (1%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 + E+ R LA++V + + L +P++ E P M EP ++ G K Sbjct: 34 RENELRRTLAERVARWTEGVDHLDTAIPNLSFHRREAPTQPMECMVEPSFGLVVQGAKRV 93 Query: 81 YINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + + YDA+ +L+ ++ LP + A+ + P GL L +D + EL+M + D Sbjct: 94 MQSGDAYIYDADRFLITSLDLPGSTQIIEASPDKPFLGLGLKLDFRVMAELMMQVAPDHD 153 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 P A G+ ++E + A RLL +++ P +LG I REI Y +LT GG L Sbjct: 154 DAP--AGRGLVVGDMTEPLYDALNRLLALLDDPHAIAVLGPYIEREIYYRLLTSDQGGRL 211 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + S + + +SR ++ + Y E+L V+ LAA+ MS S FHH+F+ +T SPLQY Sbjct: 212 RQIASTGSQCNRVSRAIRWLRAHYDESLRVDDLAAQVQMSSSTFHHHFRQLTGMSPLQYQ 271 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RL++AR +++ + + A++AA RVGY S +QF+RE+ R FG +P D +R Sbjct: 272 KWIRLNEARRLMLAERLDAASAAFRVGYASPTQFNREYSRLFGNSPRRDIDSLRG 326 >UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=Q3A5L7_PELCD Length = 307 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 8/302 (2%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 K + L ++ +L + + +P + L P MY+P I ++ G K Sbjct: 7 KTSDALECLLQRIARLTEQGELHTTAIPGLSLFRRTEPTEPVTGMYQPSICLIAQGAKRV 66 Query: 81 YINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + + YDA YL+ +V LP + T A+ E P GLRL D+ ++ +L+ D Sbjct: 67 KLGDESLVYDAQHYLITSVHLPTVVQITEASPEKPYLGLRLTFDLREVSQLMAD----SQ 122 Query: 140 FQPSM---AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 P ++ G+ + ++ +L A +RL+D++ D IL I REI+Y +L G G Sbjct: 123 LPPPRTRESSRGMATGEVTRPLLNAFQRLIDLLNEDEDIPILAPVIQREIIYRLLVGDQG 182 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L + + + I+R ++ ++ +T+ L ++ LA +A+MS S FHH+F+S+T+ SPL Sbjct: 183 ARLRQIATAGSQSQQIARAIEWLKGNFTQPLRIDDLAEQASMSTSTFHHHFRSMTALSPL 242 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 QY K RL +AR +++ + + A+ A +VGYES SQFSRE+ R FG P D +R + Sbjct: 243 QYQKQLRLREARRLMLMERLDAATAGFQVGYESPSQFSREYSRLFGAPPLRDITNLRQVA 302 Query: 317 GN 318 G Sbjct: 303 GG 304 >UniRef50_A3M8D5 Transcriptional regulator AraC family n=10 Tax=Acinetobacter RepID=A3M8D5_ACIBT Length = 297 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 165/298 (55%), Gaps = 18/298 (6%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M++ ++ + L + L +E + ++ L+ + V+ EP I+++ G K Sbjct: 1 MQQNDLTKSLVEAFLYLAPQEGLYPTHISNITLMRVDHSTQPVAVLQEPSIVLVIQGVKR 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELL--MD---- 133 YI + +F++ + L +++ +PF+C+T E P+ + + + + EL MD Sbjct: 61 AYIGKDIFKFQQGQCLFISIAIPFDCDTLVERE-PMLAIAIKFEPQMMAELATKMDKEHR 119 Query: 134 -IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + ED + + G+N ++ I A RLL+++ D ILG+Q+ RE++Y VL Sbjct: 120 PLIEDFDNKEIKLSCGLNIIEMNSVISDVALRLLNLLRSKQDTAILGEQVKRELIYRVLQ 179 Query: 193 GPCGGA-----LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNF 247 GG+ L A++SR I +++R Y NL+V++LA +A MSVS FH F Sbjct: 180 A--GGSDFIQNLSAIMSRSGVIYTICEIIQR---DYYRNLTVQELAKQAGMSVSLFHQAF 234 Query: 248 KSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 K VT+ SPLQY+K RLHKAR +I+++ M + AA VGY SASQFSREFKR FGV P Sbjct: 235 KKVTNYSPLQYIKITRLHKARDLILNNQMGVAEAAYEVGYVSASQFSREFKRLFGVPP 292 >UniRef50_A8APL9 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8APL9_CITK8 Length = 331 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 94/257 (36%), Positives = 145/257 (56%), Gaps = 10/257 (3%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVD 123 +Y+P + ++ G K + + + Y+ + +LL V LP E A++E P L L +D Sbjct: 66 IYQPSVSLILQGEKRVTLGDTAYVYNESRFLLTAVNLPTVAEVMQASAERPFISLLLELD 125 Query: 124 ILQLQELLMDI---GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 + +E+L+D+ G D F A G++ + + A R + + ERP D +G Sbjct: 126 LSVAREVLVDMEQHGNDVGF----AGEGLSLSHADRFLFDAILRYITLAERPQDKGYIGN 181 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 I REILY +LT P G L V + IS + + Y++ L +E LA A M V Sbjct: 182 LIQREILYRILTSPAGMTLRETVLTGSSSQRISSAINWLRTHYSQPLKMEDLAGIAGMGV 241 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 S HH+F+ +T+ SPLQY K RLH+AR +++ D + AS AA+RVGYES SQF RE+KR Sbjct: 242 STLHHHFRRMTNMSPLQYQKQLRLHEARRLLLSDNVDASTAAIRVGYESVSQFHREYKRL 301 Query: 301 FGVTPGEDAARMRAMQG 317 FG+TP D ++++++G Sbjct: 302 FGITPIGD--KVQSLKG 316 >UniRef50_A7HDG1 AraC-type transcriptional regulator domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HDG1_ANADF Length = 297 Score = 160 bits (404), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 96/281 (34%), Positives = 149/281 (53%), Gaps = 3/281 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA + L ++E P V + TP +Y +I++ SG K + E+ F Sbjct: 11 LAAGIAGLAHQEGCSRTRHPGVVVWRMTDAHPPTPTLYAASLILVGSGEKQATLGEQTFA 70 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 Y+A+ L++T PLP C T A+ P+ L + +++ L+EL+++ + + Sbjct: 71 YNADHLLVVTSPLPMLCRTIASETEPVLTLVVEIEMPLLRELILEAPASSPPRWPASTRT 130 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 + LS E+ A RLL + ++LG+Q IRE+L+ VL CG +L A+ + Sbjct: 131 VFRMALSPELEDAGARLLRHLGDDRRTKVLGRQTIREMLFLVLESSCGDSLRAVA--EGT 188 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 S S VL+ + + + VE+LA A+ SV FH FK++T TSPLQY+K RL +AR Sbjct: 189 VSRFSHVLRHMNGNFAGRMKVEELARLAHTSVPTFHQRFKAMTGTSPLQYMKTLRLTRAR 248 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 ++ +G A A VGYES SQFSRE++R FG P D+ Sbjct: 249 -QLLREGAMVKAVAHDVGYESESQFSREYRRLFGGPPSSDS 288 >UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=Q0C048_HYPNA Length = 307 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 97/254 (38%), Positives = 146/254 (57%), Gaps = 8/254 (3%) Query: 60 ARTPV--MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLA 116 AR P+ +Y P + I G K + VFRY A E L + + LP A+S+VP Sbjct: 38 ARMPMRQVYRPSLCIALQGAKEILFGDDVFRYGAMECLAVGLDLPASGRVVEASSDVPYI 97 Query: 117 GLRLNVDILQLQELLMDIGEDEHFQPSMAASG--INSATLSEEILCAAERLLDVMERPLD 174 G+ L++D+ L+++L G E + SG + AT + + +RL+ +++ P Sbjct: 98 GITLDLDMAILRDVL---GYLETLPVPASGSGPCLFVATADQTLADCLQRLIRLLQTPEA 154 Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 IL I+REI Y++LT P GG L L +T+ ++RV+ + + + L VEQLA Sbjct: 155 IPILYPAIMREICYWLLTSPNGGELRNLALPETNSDRVARVIHLLHANFAQTLRVEQLAE 214 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A MS S+FHH+FK++TS +PLQY K RL +AR +++ + + AA +VGYES SQFS Sbjct: 215 TARMSASSFHHHFKALTSMTPLQYQKQLRLLEARRVMVTEAASVAEAAYQVGYESPSQFS 274 Query: 295 REFKRYFGVTPGED 308 RE+ R FGV P +D Sbjct: 275 REYSRMFGVAPKQD 288 >UniRef50_D2C3B7 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D2C3B7_DICD5 Length = 300 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/286 (35%), Positives = 162/286 (56%), Gaps = 2/286 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA V K+ + +P + L A P +Y G+ I G K + +++F Sbjct: 10 LALLVAKMATIDGDYETAIPALSLYRRSAATAPMPCIYGLGLGITVQGGKRVTLGDKIFD 69 Query: 89 YDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 Y + L+ +V LP T A+++ P G+RLN+D + +L+ D+ + H + + S Sbjct: 70 YGPGQSLVTSVDLPVVSHVTKASTDEPYLGIRLNLDARLISQLVADM-DFSHTAKTCSTS 128 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 I+ L E +L A RL+ ++ + I +EI +L G G L LV++ + Sbjct: 129 AISVVELDESLLEAICRLIRLLNDHTLLPHIAPLIQQEITARLLHGQHGPTLRHLVTQGS 188 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 I++VL ++ +T++LS+E+LAA+A MS SAF +F+S+T SPLQYLKN RL +A Sbjct: 189 PGQQIAKVLSWLKLNFTQDLSMEELAAKAYMSPSAFRQHFRSLTDMSPLQYLKNLRLQEA 248 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 R +++++ + AS+AA+RVGYESASQFSRE+ R FG P D ++R Sbjct: 249 RQLMMNESLDASSAAVRVGYESASQFSREYTRLFGSPPLRDMKKLR 294 >UniRef50_Q7CW43 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q7CW43_AGRT5 Length = 305 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/268 (34%), Positives = 148/268 (55%), Gaps = 2/268 (0%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LP ++L+ PV+YEP + ++ G K + + F YD + YL+ +V LP Sbjct: 25 LPGLKLIRCSETTLPMPVVYEPTLCLVAQGRKQAVLGQTSFVYDPSSYLVASVDLPVMGS 84 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 A+ + P ++L++D ++L +L + ++H P G+ + E I+ AA RL Sbjct: 85 VIEASKDKPYLSMQLDLDTVELADLAIRYPSEQH-APINGPIGLLLNKVDEGIIDAASRL 143 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 L +++ P D L REILY ++TG G AL +V H + I+R + I + E Sbjct: 144 LALLDTPRDIDALSPLAKREILYRLITGVGGAALRQIVQAGAHVNQIARSIVWIRKHFRE 203 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 SVE A A MS S FH +FK+VT+ SPL++ RL +AR +++ +G+ A+ A +V Sbjct: 204 TCSVEAGAEVAGMSRSTFHAHFKAVTNMSPLEFRTQLRLQEARRLMLSEGLDAATAGFQV 263 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMR 313 GY S SQFSRE+ R FG++P + A +R Sbjct: 264 GYASPSQFSREYGRVFGMSPAKHANALR 291 >UniRef50_B4X416 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X416_9GAMM Length = 355 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/278 (33%), Positives = 151/278 (54%), Gaps = 6/278 (2%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P V L + + +YEP +I + G K + +R Y + YL +V LP + Sbjct: 75 IPGVSLYRADDTSSCASTVYEPSLIFILQGTKTIELGDREIVYGPSSYLASSVHLPVLGQ 134 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGED-EHFQPS----MAASGINSATLSEEILC 160 A+ P ++++VD ++ +L++++G+ ++P G+ + + E + Sbjct: 135 IVDASPNHPYLAVKIDVDPQEVTDLVLELGDKVGRYEPGNECPEVGCGLCMSHMDESMQG 194 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 A RLL++M P D +L REI+Y L G G + S + + ISRV+ ++ Sbjct: 195 ALYRLLNLMTTPDDIAVLAPLTRREIIYRSLIGEMGPRMRKFASIDSQANRISRVISTLK 254 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 ++Y+E L V+ LA ANMS S H+FK VT SPLQ+ K RLH+AR +++ +G++A+ Sbjct: 255 DRYSEPLRVKDLADSANMSESTLFHSFKQVTRMSPLQFQKKLRLHEARRLMLTEGLEAAT 314 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 A+ RVGYES S FSRE+ R FG P D +++R Q Sbjct: 315 ASYRVGYESPSHFSREYSRLFGAPPRADVSKLRGAQAG 352 >UniRef50_B9Z2E6 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2E6_9NEIS Length = 324 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 95/290 (32%), Positives = 154/290 (53%), Gaps = 9/290 (3%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPV--MYEPGIIILFSGHKI 79 R+E+ +A+ V+ ++ + P RL P+ ++EPGI ++ G K Sbjct: 15 RQELAAAIANWVDS-----DAAPYVTPIQRLTLYRLQMPSEPIRCIFEPGIALIVQGSKR 69 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + E Y A + L+ V +P T A+ E P L + +D+ + EL+++ G Sbjct: 70 VLLGEETLSYHAGQLLVTAVNVPTIANITTASPEQPYLSLWMPIDLQAMAELMVE-GNLS 128 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 +P + GI + IL + RL+++++ P +L I+REILY +L G Sbjct: 129 PPRPQPTSRGIAVGQANAAILKSFLRLIELLDEPETIPVLSPLILREILYRLLMSDFGAH 188 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L + + + I+R + ++ + + L VE+LAA MS S FHH+FK++T+ SPLQY Sbjct: 189 LWQISTAGSQSHRIARAIDWLQANFAKALRVEELAASVQMSASTFHHHFKALTAMSPLQY 248 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 K RLH+AR ++++D + A+ A RVGYESASQF RE+ R FG P D Sbjct: 249 QKKLRLHEARRLMLNDRLDAATTAFRVGYESASQFGREYHRMFGAPPARD 298 >UniRef50_Q3A5M5 Transcriptional regulator, AraC family n=4 Tax=Desulfuromonadales RepID=Q3A5M5_PELCD Length = 314 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 11/298 (3%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 K E + L+AD + + +P + + + P P + EP I ++ G K Sbjct: 15 KSEPLTALVAD-IARWTTGCGEFQTPVPGLTFYHHDQPTEPKPGLTEPSICLIAQGAKRI 73 Query: 81 YINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQLQELLMDIGEDEH 139 ++ + F YDA+ YLL +V LP + + S P GL L D+ +L L++D Sbjct: 74 HLEDETFDYDAHRYLLASVYLPTTYQVISASPGEPYLGLVLKFDMRELSRLMIDSN---- 129 Query: 140 FQPSMAASGINSATLSEEI----LCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 P+ I+ + E+ L A +RL+ ++ P D IL + REILY +L G Sbjct: 130 -LPATRTRDIDRCMSTGEVTLPLLSAFQRLVALVNEPEDIPILAPMLHREILYRLLVGDQ 188 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L + + + ++R ++ ++ + + L +++LA ANMS S+FH +F+++TS SP Sbjct: 189 GDRLRQIAASGSRSHQVARAIEWLKTNFAQQLRIDELAGMANMSASSFHSHFRAMTSLSP 248 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LQY K+ RL +AR +++ + + A+ AA +VGYES+SQFSRE+ R FG P D +R Sbjct: 249 LQYQKHLRLQEARRLMLAEDLDATRAAFQVGYESSSQFSREYSRLFGAPPLRDVNSLR 306 >UniRef50_B2KD36 Transcriptional regulator, AraC family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KD36_ELUMP Length = 298 Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 97/287 (33%), Positives = 158/287 (55%), Gaps = 4/287 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E+ + L +KV L K S + + +R+ P Y+P I ++ G K N Sbjct: 7 ELNKQLQEKVLNLVPKPGSFATDIKGLRIFRRNQPEEARKCFYKPIIALMLQGSKQCVFN 66 Query: 84 ERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 Y ANE L+ ++ +P T A+ E P G+ L +D +++L+++ + P Sbjct: 67 AEKIEYVANECLVTSIDIPSASRITDASPEKPCIGVTLGIDSFIIKQLIIETNLLKTDYP 126 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDAR-ILGKQIIREILYYVLTGPCGGALLA 201 + A G+ A + EIL A R++ ++E+P + + IL IIREI Y +L P G L Sbjct: 127 AQRAVGVTKA--NSEILDAFLRIVTLLEQPKEQQNILAPMIIREIYYRLLMTPVGEQLRM 184 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + T + I+ ++ ++ + E L+VE+LAA+ NMS S+F+ NF+ VT SPLQY K Sbjct: 185 VNTVGTKSNQIATAIEWLKENFKEELNVEKLAAKVNMSPSSFYRNFRKVTDVSPLQYQKQ 244 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 RL++A+ +++ D + A+ A VGYES +QF+RE+KR FG P D Sbjct: 245 LRLYEAQRLMVSDNLDAANAGYAVGYESPTQFNREYKRMFGNPPKTD 291 >UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3B5_HERA2 Length = 312 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 83/252 (32%), Positives = 146/252 (57%), Gaps = 2/252 (0%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLN 121 P +Y+P I ++ G K + ++ + YD L++ V LP + T A++ P +L Sbjct: 58 PALYQPSICLVAQGAKQLVLGDQTYNYDTEHVLIVAVDLPVAAQITQASAAEPYLCFKLE 117 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 D ++ EL + + P+ I++ + +++ AA RLLD++ +P + +L Sbjct: 118 FDPQRVAELALKVYSQGVPAPTQL-RAISTERTNRQLVQAASRLLDLLSQPDEVELLAPL 176 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 +I E++ +L P GG L + + + +++ + + + + L VE+LA ANMSVS Sbjct: 177 VIDEMIIRLLRSPFGGRLAQIGQTTSRVTPVAQAIGWLRRHFAQPLRVEELATLANMSVS 236 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 AFH +FK+VT+ SP+Q+ K RLH+AR +++ ++ + + +VGY S SQFSRE++RYF Sbjct: 237 AFHLHFKAVTALSPIQFQKTLRLHEARRLLVATALEIGSISQQVGYASLSQFSREYRRYF 296 Query: 302 GVTPGEDAARMR 313 G +P ED AR+R Sbjct: 297 GCSPTEDLARLR 308 >UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=A4XVM8_PSEMY Length = 315 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 97/279 (34%), Positives = 145/279 (51%), Gaps = 14/279 (5%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P ++L +P +Y+P + I+ G K + + ++ YD YL+ +V LP Sbjct: 40 IPGLKLARATSPSLPMQTVYDPCLCIIAQGRKEIRLGDELYVYDPLNYLVASVMLPVTGR 99 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSAT------LSEEIL 159 A+ E P L L +D + LL ++ P + A S L +L Sbjct: 100 VIEASPEAPYLSLALEIDPALISSLLTEM-------PPIPAPDAASQRALFLDRLDPRLL 152 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI 219 A RLL ++E P D +L +REI Y +L P G L +V + ISR ++ + Sbjct: 153 DAVIRLLRLLETPRDIAMLAPLALREIFYRMLLSPQGHRLHEVVVADSQSQRISRAIEWL 212 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 + + L +E+LA E N+S S HH FK+VT+ SPLQY K RL +AR +++ D ++A+ Sbjct: 213 RKNFDQPLRIEELAREVNLSPSTLHHRFKAVTAFSPLQYQKQLRLQEARRLMLCDNLEAA 272 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 AA+ RVGYES SQFSRE+ R FG P D AR+R N Sbjct: 273 AASYRVGYESPSQFSREYSRLFGAPPQRDIARLRQAAQN 311 >UniRef50_Q1QSH7 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1QSH7_CHRSD Length = 322 Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 166/304 (54%), Gaps = 14/304 (4%) Query: 23 EEICRL---LADKVNKLKNKENSLSGLLPDVRLLYGETPFART--PVMYEPGIIILFSGH 77 +EI +L L+ ++ K +E +P + L+ + +Y+P + ++ G Sbjct: 13 DEIVQLADTLSRRIQKWAPEEGLTPTAVPGLELVRANSSLTNCIGSTVYDPSLCLIAQGS 72 Query: 78 KIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGE 136 K ++ +R Y ++ V LP + T A++E P GL+L VD ++ +L++++GE Sbjct: 73 KRIWLGDREIDYGPLSCMVSAVHLPVLGKITEASAERPYLGLKLAVDAQEVTDLVLELGE 132 Query: 137 D----EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 E + A G+ + ++ A RL+ +++ P D RIL + REI Y L Sbjct: 133 GLSEMEERGCAETACGLGRVQAEKGLVEAMLRLVSLLDSPQDIRILAPLVRREIFYRALV 192 Query: 193 GPCGGAL--LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 G G + A+ QTH IS+V+ +++++TE L V +LA NMS S+ H+FK V Sbjct: 193 GEIGLHMRKFAVADTQTH--RISKVIAVLKDRFTEPLRVRELADMVNMSESSLFHSFKQV 250 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T SP+Q+ K RLH+AR +++ +GM+A+ A+ RVGY S S FSRE+ R FGV P D + Sbjct: 251 TRMSPVQFQKKLRLHEARRLMLAEGMEAATASFRVGYGSPSHFSREYSRLFGVPPRTDVS 310 Query: 311 RMRA 314 ++R Sbjct: 311 KLRG 314 >UniRef50_A6WBM1 AraC-type transcriptional regulator domain protein n=5 Tax=Actinomycetales RepID=A6WBM1_KINRD Length = 330 Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 93/261 (35%), Positives = 144/261 (55%), Gaps = 4/261 (1%) Query: 57 TPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PL 115 TP A M + ++ G K +++R RY A +Y++ ++ LP + SE P Sbjct: 63 TPAAPAASMDGAVLAVIAQGEKTLVLDDRELRYGAGQYVVASLDLPVTGQFTGASEAEPA 122 Query: 116 AGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSE---EILCAAERLLDVMERP 172 G L + + ELL+ E A+ + T+ + ++L A R+L ++ERP Sbjct: 123 LGFGLALKPALIAELLLHPAARELPGTGRGAAAPFALTIGDAGSDLLDAVVRMLRLLERP 182 Query: 173 LDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQL 232 D +L I REIL+ ++TGP G A+ L + S ++R ++ + Y + L V++L Sbjct: 183 RDRVVLAPLIEREILWLLITGPHGEAVRQLGLADSSLSNVARAVRWLREHYAQPLRVQEL 242 Query: 233 AAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQ 292 A A MS SAFH F +VTS SP+Q+ K RL +AR+ ++ D + A VGYESASQ Sbjct: 243 AQVAAMSPSAFHRAFAAVTSMSPIQFQKRIRLQQARLRLLTDPADVAGAGHAVGYESASQ 302 Query: 293 FSREFKRYFGVTPGEDAARMR 313 FSRE++R FG+ PG+DA R+R Sbjct: 303 FSREYRRLFGLPPGQDATRLR 323 >UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVI5_9RHOB Length = 298 Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 141/250 (56%), Gaps = 3/250 (1%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLN 121 PV+Y P ++ G K Y+ + R+ A + L++ + LP + + S P L L Sbjct: 44 PVVYRPIFCLVLQGEKQTYLGSQTVRFGAMQSLIVGLDLPAQARVVSASRTEPYVALALP 103 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 +D+ ++EL ++I D + S A+ + S I+ A RL ++ + P ++L Sbjct: 104 LDMALIRELALEI--DRPGKSSPASGAVASGRADAAIVDAMRRLFELSQMPEAGKVLLPL 161 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 ++REI Y++LT G L + + +H + I+RV+ I +L V+ LA +A MSVS Sbjct: 162 LLREIHYWLLTAKHGAILRQVAEQDSHAARIARVIAGIRRDIAASLRVDDLAGDAGMSVS 221 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 AFH +FK +T TSPLQ+ K RL +AR ++ + + S AA +VGYES +QFSRE+ R+F Sbjct: 222 AFHAHFKELTGTSPLQFQKQLRLMEARRLLQAEKLSVSRAAFQVGYESPTQFSREYSRHF 281 Query: 302 GVTPGEDAAR 311 G+ P D A+ Sbjct: 282 GLPPRADKAQ 291 >UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDX1_9CAUL Length = 302 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 146/267 (54%), Gaps = 4/267 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P +RL + P V YEP + ++ SG K + E V+ Y A + L+++ LP C Sbjct: 26 VPGLRLYGSDAPTRMVSVGYEPMLCLVVSGGKQTILGETVYSYRAGDCLVVSAELPV-CG 84 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 + E P L +++ + L+++IG PS SGI+ L +E+L RLL Sbjct: 85 SII--EAPYRALSFDLNPATIAGLMVEIGAPAASDPS-PPSGIHVTQLEDELLEPMARLL 141 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 +++RP + ++ I RE+++ +L + + S ++ S +SR + I Y E Sbjct: 142 RLLDRPHEIAVMTPMIERELVWRLLHSRHAATVRQIGSAESRLSGVSRAINWIRAHYAEP 201 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 + +E L+ A MS+S FH +F++VT+ SPLQ+ K RL +AR ++ A+ VG Sbjct: 202 MRLEALSDLAGMSLSTFHRHFRTVTTMSPLQFQKQVRLQQARARLLSGADGAAETGFAVG 261 Query: 287 YESASQFSREFKRYFGVTPGEDAARMR 313 Y+S SQFSRE+ R FG+ PG DAARMR Sbjct: 262 YDSPSQFSREYARQFGMPPGRDAARMR 288 >UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=A6B9E2_VIBPA Length = 307 Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 90/253 (35%), Positives = 142/253 (56%), Gaps = 2/253 (0%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDI 124 + P I ++ G K + E F YDAN +L+ ++ LP A+ E P GL + +D+ Sbjct: 56 HNPSICLIAQGRKRVLLGEESFIYDANHFLISSIDLPIIANIIEASEEQPYLGLIMELDL 115 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 ++ +L++D GE Q A GI LSE +L A RL +++ + +IL I R Sbjct: 116 TEISQLIVD-GELAFIQSKEAQKGIAVGELSESLLDAFVRLAELLNEGQNIKILAPIIKR 174 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 EI Y +L G L +V+ +H I++ + ++N + + LSV LA+ MS S+F+ Sbjct: 175 EIFYRLLMSEQGTRLHQIVTAGSHSHQIAKAIDWLKNNFVKPLSVGDLASYTGMSKSSFY 234 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 +F+S+TS +PLQ+ K RL +AR +++ + + A AA +VGYES SQFSRE+ R FG Sbjct: 235 THFRSMTSMTPLQFQKKLRLSEARRLMLTENLDAMAATFKVGYESPSQFSREYSRLFGAP 294 Query: 305 PGEDAARMRAMQG 317 P +D +R G Sbjct: 295 PSKDIKSLRENLG 307 >UniRef50_Q1GMB4 Transcriptional regulator, AraC family n=3 Tax=Rhodobacterales RepID=Q1GMB4_SILST Length = 299 Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 143/243 (58%), Gaps = 4/243 (1%) Query: 64 VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNV 122 YEP + ++ G K Y+N RV RY A + L+++ +P E A+ + P L L + Sbjct: 45 AFYEPIMCLVLQGAKEAYLNGRVVRYSAGDTLIVSHAIPVESAVMQASPDAPYTALALRL 104 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQI 182 D+ + + +IGE + S A +N+A ++ A RL +V + P++AR L I Sbjct: 105 DLAMARSMNDEIGERDD---SANAHSLNAAASDAALIDATHRLFNVSKDPVEARTLAPLI 161 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 +REI + +L GG L L+++ + S I++V+ + + NL V LA+E MS+SA Sbjct: 162 LREIHFRLLRAQHGGMLRQLLNQDSPASRIAQVIATMRENFKSNLPVADLASECGMSLSA 221 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 FH +F+SVT+T+PLQY K+ RL +AR +++ + ++AA VGYES +QFSREF R FG Sbjct: 222 FHEHFRSVTATTPLQYQKDLRLLEARRLLVTENRSVASAAYEVGYESPTQFSREFSRKFG 281 Query: 303 VTP 305 + P Sbjct: 282 MPP 284 >UniRef50_B1X2S3 Transcriptional Regulator, AraC family n=3 Tax=Cyanobacteria RepID=B1X2S3_CYAA5 Length = 313 Score = 153 bits (387), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 86/252 (34%), Positives = 153/252 (60%), Gaps = 6/252 (2%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP---FECETYATSEVPLAGLRLN 121 +Y+P + ++ G K + E+ ++Y A +YL+++V LP F E AT E P GL+LN Sbjct: 56 VYQPILALVVQGQKEALLGEKRYQYGAGQYLIISVDLPLSGFVIE--ATPEKPYLGLKLN 113 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 +D++QL +L++ + + + + + G++ + + ++ A RL+ +++ P +L Sbjct: 114 LDLMQLCDLVVQMSPRLNKKEN-SVQGLSVSNVDAGLIECALRLVKLLDTPQHISMLAPI 172 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 +I E+ Y +L G A+ + + ++ I+ +K ++ K+T+ + +E LA+ +MS S Sbjct: 173 MICELNYRLLIGKQSEAVRQIATSGSNMQRIASAIKLLKAKFTQPIRIEDLASHVSMSTS 232 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 +FH +FK VTS SPLQY K RL +AR +++ + + A +AA +VGYES+SQFSRE+ R F Sbjct: 233 SFHQHFKRVTSMSPLQYQKQLRLLEARRLMLAENVDAMSAAYQVGYESSSQFSREYARMF 292 Query: 302 GVTPGEDAARMR 313 G P D R+R Sbjct: 293 GAPPIRDIERLR 304 >UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=Alphaproteobacteria RepID=A1B7B0_PARDP Length = 317 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 12/302 (3%) Query: 16 KLRDMKREEICRL--LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73 +LR M+ + + L L + + +E + GL+ L P +Y P + ++ Sbjct: 15 RLRFMENDHLAPLKELIARQWQAHGRETPIEGLV----LTSVTAPTGPIHAVYRPSLCVV 70 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLM 132 G K + ER +RYDA + L+ ++ +P E T AT + P L +D + +LL+ Sbjct: 71 AQGAKTSMLGERAYRYDAGKCLIASMEVPIRAEITRATPDRPYLAFSLALDPATISDLLL 130 Query: 133 D-IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 + G D+ P+ AA +++ E+ RLL + +RP D IL + REI + +L Sbjct: 131 ERDGTDD--APAGAALAVHA--FGPELADPLCRLLALCDRPRDIAILAPLVRREITWLLL 186 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 GP G AL + + + I+R + I + + L++ QLA A MS + FH +FK+VT Sbjct: 187 NGPMGPALRQIGLAGSPMARIARAIACIREGFADKLNIRQLADVAGMSPATFHRHFKAVT 246 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + +P+QY K RL +AR +++ D + +GYES SQFSRE++R FG PG D Sbjct: 247 AMTPVQYQKQLRLQEARRLLLFDNADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQE 306 Query: 312 MR 313 +R Sbjct: 307 IR 308 >UniRef50_C6ARF9 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=C6ARF9_RHILS Length = 306 Score = 153 bits (386), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 144/259 (55%), Gaps = 8/259 (3%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTV---PLPFECETYATSEVPLAGLR 119 P++Y+P ++ G + +I +++F Y + +++ L CE A+ + P + Sbjct: 39 PLIYDPAASLVIQGTQRMFIGDKMFEYGPGQSMIVAAEIAALGQICE--ASEDQPFLAVG 96 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 L +D L +L++++ SG +T S +L A RLL++++RP + ++ Sbjct: 97 LFLDPALLSDLVLEMAAIPELP---IESGYGVSTASASLLGAWGRLLELLDRPTEIPVMA 153 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 + + E+++ +L GP GG L +V + I + + I + YTE L+ + +AA A MS Sbjct: 154 QSLEHELMFRLLMGPHGGLLRQIVGSDSRLMHIRKAMAWIRDHYTERLNFKAVAALAGMS 213 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 VS F+ FK+V + SPLQY K RLH+AR +I + + A+ VGYESASQFSRE+KR Sbjct: 214 VSVFYDRFKAVAAVSPLQYQKYIRLHEARRRMIANQVSAAEVGFAVGYESASQFSREYKR 273 Query: 300 YFGVTPGEDAARMRAMQGN 318 FG PG+D R +A G Sbjct: 274 LFGAPPGQDTERAKAGLGG 292 >UniRef50_C6D8S3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S3_PAESJ Length = 305 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 ++ E+ R LAD + + + +P++ L++ +Y+P + ++ G K Sbjct: 5 LRMEQALRQLADLILRHAPSSGTFPTSVPNLSLMHATHLSEPLESVYKPSLCLVALGAKT 64 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + + +RYD ++++ LP + A+ E P L+L+ D ++++D+ ++ Sbjct: 65 ATLGDETYRYDPMTFVVIAAELPIISKIVEASPEAPYLSLKLSFD----PDVILDMVKES 120 Query: 139 HFQPSMAAS---GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + A GI S +L AA RL+ +++ P D +L I+REILY VL Sbjct: 121 SHAAASPADASPGITMNRTSPGLLEAAVRLVQLLDTPEDIPVLAPLIVREILYRVLQSEH 180 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G + + +H I++ ++ I +Y E L ++QLA A++S SAFH +FK VTS SP Sbjct: 181 GSLIHSFAMIGSHSHNIAQAIRMINRQYAEPLVIDQLAKVASLSTSAFHKHFKRVTSMSP 240 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 LQY K RL +AR +++ + + AS AA RVGYES SQFSRE+ R +G P D RA Sbjct: 241 LQYQKTLRLQEARRLMLTETVHASEAAFRVGYESPSQFSREYARMYGRPPMLDIQEQRA 299 >UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=Bacteria RepID=B2J894_NOSP7 Length = 326 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 87/247 (35%), Positives = 138/247 (55%), Gaps = 3/247 (1%) Query: 68 PGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQ 126 P + G K + ++YD YLL TV LP + S+ P LRL++D Sbjct: 72 PAFCAIAQGSKEVLLGSERYQYDPMHYLLATVELPIVSQILEASKAQPYLSLRLDLDPTL 131 Query: 127 LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREI 186 + ++++ G + + A I+ + L+ +L A RL+ +++ P +A +L I REI Sbjct: 132 VGSVMVEAGYPSRRRADVKA--IDVSPLNANLLDAVVRLVRLLDSPAEAHVLAPLIKREI 189 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 +Y +L G G L + + I+R ++R+ + E + +E +A E MSVS FHH+ Sbjct: 190 IYRLLMGEQGNRLRHIAVLGGYTYHIARAVERLRKDFNEPIKIESIARELGMSVSGFHHH 249 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FKSVT+ SPLQY K RL +AR +++ + + A++AA RVGY+ AS F+RE+KR FG P Sbjct: 250 FKSVTAMSPLQYQKQLRLQEARRLMLGEKLDATSAAYRVGYDDASHFNREYKRLFGAPPM 309 Query: 307 EDAARMR 313 D R+R Sbjct: 310 RDVERLR 316 >UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] brachysporum RepID=A8KCK0_9BURK Length = 322 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 168/313 (53%), Gaps = 12/313 (3%) Query: 3 QNCAQSNCRIIPK----KLRDMKR-EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGET 57 Q+ Q+N +P ++D R E+ RLL N+ ++ + +P + ++ T Sbjct: 4 QDQVQTNNAALPSLEVNAVKDNVRVSELARLL----NQHAPRKGVGATAIPRLSVIKLST 59 Query: 58 PFAR-TPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPL 115 P ++EP + I+ G K + + V+ YD + +L+ + LP + T AT E P Sbjct: 60 PSDELVHALHEPAVCIIAQGAKRVMLRDEVYCYDTSRFLVFSTDLPISAQVTDATFERPY 119 Query: 116 AGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDA 175 RL++D ++ EL++ +G + + + G+ + ++ +L AA RLL +++ P D Sbjct: 120 LCFRLDLDPKEVSELVLQLGAPPATR-NATSRGLFLSAATDAMLDAAVRLLRLLDTPEDV 178 Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 L RE++Y +L G L + + ++R + ++ Y E L V++LA Sbjct: 179 PALAPLATRELVYRLLKSEQGERLAQVARADSPGHRVTRAIAWLKANYAEPLKVDELARC 238 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 MS S+ HH+F+ +TS SPLQY K RL +AR +++ +G++ S AA VGYESASQFSR Sbjct: 239 CCMSTSSLHHHFRVLTSMSPLQYQKQLRLQEARRLMLSEGIEVSKAAYTVGYESASQFSR 298 Query: 296 EFKRYFGVTPGED 308 E+ R +G+ P +D Sbjct: 299 EYSRLYGIAPSKD 311 >UniRef50_B0C5B1 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B1_ACAM1 Length = 291 Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 92/259 (35%), Positives = 145/259 (55%), Gaps = 6/259 (2%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLR 119 R P +Y+P I ++ G K Y++ YD ++YL T+P+P E E A+ E PL GL Sbjct: 36 RLPGVYDPSICVIVQGQKRAYLDGTTHIYDRDQYLCSTLPIPAEAEVVEASPEKPLLGLL 95 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMA--ASGINSATLSEEILCAAERLLDVMERPLDARI 177 L ++ + E ++++ + S A G+ A E+ +RLL++++ P+ I Sbjct: 96 LRLETRTMFETVLEMTALDRGSASRAEVVPGLTVAKWDEDFATGLQRLLELLDDPVALNI 155 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 LG ++E+++ VL G GGA + ISR L + E +S+++LA EA Sbjct: 156 LGSGRLKELMFAVLRGEAGGAFVHAFG--GGMQQISRALTFLNANLHEAISIDELAKEAG 213 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 MS + FH FK VT+ SP+Q++K +RL++A +I+ G A AA RVGY S SQFSR+F Sbjct: 214 MSRAVFHRKFKEVTTYSPIQFIKLHRLNEASRLIV-SGSTAGDAANRVGYSSQSQFSRDF 272 Query: 298 KRYFGVTPGEDAARMRAMQ 316 +RYFG +P + R+ Q Sbjct: 273 RRYFGKSPYQWGLEQRSEQ 291 >UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F2M7_9ALTE Length = 310 Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 8/289 (2%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 R L ++ + E+++ GL R+ P +Y+ I+ G K+ + E Sbjct: 21 RDLVEQQWQAHGPESAIDGL----RVTRALEPSGTIRALYQTSFCIVLQGAKVTAVGESA 76 Query: 87 FRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 F Y E LL +V +P ATS+ P L L++D + ELL+ E + P Sbjct: 77 FHYRQGECLLASVNVPVNSRIVQATSDKPYLALSLSIDPAMISELLVTHPEMAYRCPKQP 136 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 A +++A + +E+ RLL ++++P D +L + REI + VL P G AL + + Sbjct: 137 A--LSTAGMPDELYDPVIRLLRLLDQPDDREVLEPLVRREICWRVLRSPLGPALQQVGLK 194 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + + I RV ++ Y + V +LAA A+MS + FH +FKS+T +P+Q+ K RL Sbjct: 195 DSDTARIGRVTAWMQANYQQPFRVAELAAMASMSPATFHRHFKSITRLTPVQFQKLVRLQ 254 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR +++ D + ++ RVGYES SQFSR++++ FG PG D A MR+ Sbjct: 255 EARRLLLSD-QEVASIGYRVGYESPSQFSRDYRKLFGAPPGRDKAVMRS 302 >UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Proteobacteria RepID=B9JGH7_AGRRK Length = 335 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 141/250 (56%), Gaps = 1/250 (0%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDI 124 Y P I+ GHK + + Y EY+L + LP + T SE P + +D Sbjct: 81 YRPCFAIVVQGHKTLTVGADTYHYGVGEYILTALDLPVSTQVTNVGSETPYLCFGMALDS 140 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 +L+ELL +G + G+ S E+L A+ RLL +++RP D + I + Sbjct: 141 ERLKELLSRVGIPREAVTAEPVRGLAVNPASPELLDASLRLLRLLDRPEDIPAMAPLIEQ 200 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 EILY +LTGP G LL + ++ + ++R + I +T+ L +E+LA A MSVS+ H Sbjct: 201 EILYRLLTGPNGPRLLQVAMAESQSNRVARAIAWIRGNFTQPLRIEELAERAGMSVSSLH 260 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 H+FK+VT+ +P+QY K RLH+AR ++I + + +A RVGY+S SQFSRE+ R +G++ Sbjct: 261 HHFKAVTAMTPIQYQKQLRLHEARRLMIVEQLDVGSAGHRVGYQSPSQFSREYSRLYGLS 320 Query: 305 PGEDAARMRA 314 P D +R+ Sbjct: 321 PLRDVEGIRS 330 >UniRef50_C8SHN4 Transcriptional regulator, AraC family n=2 Tax=Mesorhizobium RepID=C8SHN4_9RHIZ Length = 297 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/269 (33%), Positives = 139/269 (51%), Gaps = 7/269 (2%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P V + E + P + +P + + G K I +R Y A Y + V P + Sbjct: 25 IPRVSIGRSEIATSPLPELCQPTALFVLQGTKTVLIGDRTLFYGAGSYFVYAVETPATSQ 84 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 A+S P + +DI + L++D +P++ + +E+L A R+ Sbjct: 85 LIEASSARPYVAVAFALDIELIATLIVD------HKPALDGDSFVTNRADDELLDAWRRM 138 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 L +++RP + +L + REI + +L GP G L L S I R I + Y E Sbjct: 139 LRLLDRPAEIPVLAPMLEREIAFRLLQGPQGAKLRQLARADGRLSQIRRATAWIRSHYNE 198 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 + V +LA A+MS ++FH +FK+ T+ SP+QY K RL +AR ++I + A+ A V Sbjct: 199 PIDVTELAELAHMSNASFHRHFKAATAMSPIQYQKQVRLLEARHLLIAESGNATRVAFAV 258 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMRA 314 GYESASQFSRE+ R+FG+ P DAAR+ A Sbjct: 259 GYESASQFSREYARHFGLPPARDAARLLA 287 >UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteobacteria RepID=B9JBG2_AGRRK Length = 333 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/252 (34%), Positives = 139/252 (55%), Gaps = 4/252 (1%) Query: 64 VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNV 122 ++Y P + ++ G K +++RV Y + L++++ LP A+ E P + L Sbjct: 80 MIYRPALCVIVQGAKQLMLHDRVIDYAEMQALIISIELPAAGRVIEASPEKPYIAISLEF 139 Query: 123 DILQLQELLMDIGEDEHFQPSMAAS-GINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 D+ ++E++ + D +P+ A GI LS+ + RL ++ P +L Sbjct: 140 DVGMMREVMEQL--DVPPKPTGGAGLGIFVEDLSQPLADCLVRLTGLLATPRAIPVLHPA 197 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 I+REI +++LTGP GG + LV + I+ ++ + + + E + +EQLAA A MS S Sbjct: 198 IMREICFWLLTGPNGGEVCKLVLPDSQTRRIADAIRLLRDNFAEPVRIEQLAAAARMSPS 257 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 +FH +FK++TS +PLQY K RL +AR +++ AA RVGYESASQFSRE+ R F Sbjct: 258 SFHQHFKTLTSMTPLQYQKQMRLLEARRLMVAGSANVENAAYRVGYESASQFSREYTRMF 317 Query: 302 GVTPGEDAARMR 313 G P D +R Sbjct: 318 GAPPKRDVTELR 329 >UniRef50_A9HQ74 Putative transcriptional regulator, AraC family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQ74_GLUDA Length = 306 Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 86/253 (33%), Positives = 135/253 (53%), Gaps = 6/253 (2%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVD 123 +Y + ++ G K + F YD + YL+ TV LP A+ P L ++ D Sbjct: 42 IYRSRLYLIVQGRKRVELGTHAFTYDDSHYLITTVDLPVSSAVIEASPHQPYLALSIDFD 101 Query: 124 ILQLQELLMDI--GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 L +LL+ + G D + + +G+ A+L E +L + RL+ +++ P D +L Sbjct: 102 PAVLADLLLSVPVGGD---RGAGDEAGLAVASLDEALLDSVRRLVALLDTPGDIAVLAPL 158 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 + +EI Y +LTGP G L A+ +H + I+RV+ + Y E ++ LA A MS Sbjct: 159 VRQEIYYRLLTGPLGVRLRAIAVADSHLTRIARVMAWMRTHYAEEFGIDDLARLAGMSAP 218 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 + +FK+V SP+QY RL +AR ++ DG A+ A VGY+S SQFSR+++R F Sbjct: 219 SLFRHFKAVALMSPMQYRTCIRLQEARRRLVADGDDAAEAGFAVGYDSPSQFSRDYRRMF 278 Query: 302 GVTPGEDAARMRA 314 GV P DAAR+R Sbjct: 279 GVPPARDAARLRG 291 >UniRef50_A9WCQ6 AraC-type transcriptional regulator domain protein n=2 Tax=Chloroflexus RepID=A9WCQ6_CHLAA Length = 314 Score = 147 bits (372), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 147/268 (54%), Gaps = 4/268 (1%) Query: 50 VRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYA 109 +RL Y P ++ + P + ++ G K + + YDA YL+ LP A Sbjct: 44 LRLYYTTRPTSKRHGVSTPALCVVLQGAKEVVLGSDRYCYDAQHYLITAAALPITTRVIA 103 Query: 110 TS-EVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDV 168 S E P G+ L +D + ++ + G+ S+ A + + L ++L A RL+ + Sbjct: 104 ASPEQPYLGIVLQLDPALVGSVIAEAGQSGLTNRSVCA--FHVSPLEGKLLDAVTRLVRL 161 Query: 169 MERPLD-ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENL 227 E P + A L I+REI++ +L G G L + + I + L+R+ ++ + L Sbjct: 162 AEDPPEEANFLRPLIVREIVFRLLRGNQGDRLQQIAATGGQIQRIIKALERLRAEFDQPL 221 Query: 228 SVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGY 287 + ++A E MSVS+FHH+FK++T+ +P+Q+ K RL +AR +++ +G+ AS+AA +VGY Sbjct: 222 RIAEMARELGMSVSSFHHHFKAITTLTPVQFQKQLRLQEARRLMLSEGLDASSAAFQVGY 281 Query: 288 ESASQFSREFKRYFGVTPGEDAARMRAM 315 S F+R++KR+FG TP D R+RAM Sbjct: 282 HDPSHFTRDYKRFFGTTPLRDMKRLRAM 309 >UniRef50_A6FZ93 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZ93_9DELT Length = 301 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 96/287 (33%), Positives = 150/287 (52%), Gaps = 20/287 (6%) Query: 31 DKVNKLKNKENSLSGL----LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 D++ L + GL + + L P R P +Y + + G K Y+ Sbjct: 4 DRLRALVERHAGPDGLSATPIAGLSLFRVNQPVERLPAVYPASMCCVAQGSKRAYLGGVA 63 Query: 87 FRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + YDA+ YL + +PLP E E A+ + P+ G+ L++D + E L + + +P A Sbjct: 64 YTYDADHYLCVAMPLPVEAEVPVASPDEPVLGVLLDLDTPAMAETL--VAYEAAARPRSA 121 Query: 146 AS-----GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 ++ G+ L A RLL++++ P+ R+L K +RE+L+ +L G G + Sbjct: 122 STRALSPGLAVVEADAAFLDAVVRLLELLDNPVALRVLAKGRMRELLFTILAGQAGPLM- 180 Query: 201 ALVSRQTHFSL--ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 RQ+ + I+RVL I + LSV++LA A MS + FH F++ TS SPLQ+ Sbjct: 181 ----RQSFGAAQDITRVLHHIREHLHDPLSVDELAQRAGMSRAVFHRRFRAATSFSPLQF 236 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +K RL A M+I+ G S AA VGY SASQFSREF+++FG +P Sbjct: 237 IKALRLSHAAMLIV-GGQAVSQAADAVGYTSASQFSREFRKHFGDSP 282 >UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria RepID=Q3JGA1_BURP1 Length = 390 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 153/298 (51%), Gaps = 12/298 (4%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 RE R LA + + + + +P + +P + + G K Sbjct: 91 REAARRELAALIERFAPADGAHPSAIPALSFFRCSSPVDLGCSVTRAAFVFAAQGAKRVT 150 Query: 82 INERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 + + + YD + L+ +V LP + T A++ P +++ +D+ ++ EL ++ Sbjct: 151 VAGQAYEYDHQQCLVTSVDLPMLSQVTRASAGAPYLCVKIALDVQRIAELSAEM----RM 206 Query: 141 QPSMA---ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 P A GI LSE + AA RL+ +++ P D IL I +E+LY +LT G Sbjct: 207 PPPEAVPTGEGIVVGALSEPLFDAALRLVRLLDTPADIPILAPLIEKELLYRLLTSGLGA 266 Query: 198 AL--LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 L +A+ QT+ I+R ++ + + YTE L VE LA + NMSVS+ HH+FK VT+ SP Sbjct: 267 RLRHIAVAGSQTY--RIARAIEWLRHHYTEPLRVETLAQQVNMSVSSLHHHFKHVTTLSP 324 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LQY K RLH+AR +++ + A+RVGY+S SQFSRE+ R FG P D + R Sbjct: 325 LQYQKQLRLHEARRLLLGQHGDVGSVALRVGYDSPSQFSREYSRLFGAPPLRDVVQRR 382 >UniRef50_A6M087 AraC-type transcriptional regulator domain protein n=2 Tax=Firmicutes RepID=A6M087_CLOB8 Length = 311 Score = 147 bits (371), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 162/303 (53%), Gaps = 5/303 (1%) Query: 15 KKLRDMKREEIC---RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGII 71 K++ ++K ++C R LA V K ++ S +P + L+ +Y P I Sbjct: 3 KRIYNIKNYKLCSQQRRLASLVEKFTYRDGFQSTDIPSLDLIRASNISEPLHSIYIPSIC 62 Query: 72 ILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQEL 130 ++ G K + + +RYDA+ YL+ +V LP + AT + P +RL+ + Q+ ++ Sbjct: 63 VIVQGAKTVILGKESYRYDASSYLVASVNLPIIGKIIEATPDQPYLCVRLSFNSDQILDI 122 Query: 131 LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 + + +D +P + G+ + +L A RL+ ++E + +L IREILY V Sbjct: 123 IKESKQDFEEKPGLE-RGLTVTKGNSLLLDALLRLVSLLETTEEIPVLAPLFIREILYRV 181 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L G L +H IS+ + I N + + L +++LA E NMS S+ HH FK V Sbjct: 182 LQDKHGYILKQFAMIGSHARAISKAINLINNNFEKPLRIDELAKEINMSSSSLHHCFKKV 241 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T+ SPLQY K RL +AR +++ + ++A+ A +VGYES SQFSRE+ R FG+ P D Sbjct: 242 TAMSPLQYQKQIRLQEARRLLLSEVLEAAEAGYKVGYESPSQFSREYARMFGLPPISDIK 301 Query: 311 RMR 313 R++ Sbjct: 302 RLK 304 >UniRef50_Q65QM2 AraC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QM2_MANSM Length = 290 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 92/280 (32%), Positives = 151/280 (53%), Gaps = 5/280 (1%) Query: 35 KLKNKENSLSGL---LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDA 91 KLK+ E G+ +P++ + + ET + E GI ++ G K + ++ +RY A Sbjct: 11 KLKSGEKGTMGIETPVPELFVFHSETDLRDVSQLQESGICLILQGRKDVRVGDQHYRYQA 70 Query: 92 NEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINS 151 E++ TV LP E Y T + LRL D+ ++E++ ++ ++F + A+ Sbjct: 71 GEFVCYTVDLPIMTE-YLTDDGGYLDLRLFFDLPLMREIIDELNR-QNFSFAPASQQKIV 128 Query: 152 ATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSL 211 +T S E++ A E L+ + E D I+ I + I +Y+LTG GG L + + ++ Sbjct: 129 STASPELIRAFEMLICLTENSQDLPIMLPLIKKAIYFYLLTGEQGGTLRQIALQNSNSQR 188 Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I + ++ Y E+ +EQLAA ++MS+S F+ F+ +T SPLQY KN RL KA ++ Sbjct: 189 IVETVGWLKEHYNESFDIEQLAAASSMSISGFYAQFRRLTGMSPLQYQKNLRLTKANALL 248 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 S A +GY+S QFSRE+KRYFG +P D +R Sbjct: 249 KLGQKNISEIAFEIGYDSLPQFSREYKRYFGHSPRSDLSR 288 >UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=Caulobacter RepID=B0T4V7_CAUSK Length = 303 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 92/258 (35%), Positives = 136/258 (52%), Gaps = 13/258 (5%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVD 123 ++ + ++ G K V YDA YL+ +V LP + A+ E P R+ +D Sbjct: 43 VFGAAVCVVAQGRKKVLAGGSVLVYDAMHYLVASVDLPVIGQVVDASPEEPYLCFRMTLD 102 Query: 124 ILQLQELLMDIGEDEHFQP-------SMAASGINSATLSEEILCAAERLLDVMERPLDAR 176 + +LL+ +G + +MA S +N +L A R++ +++ P DA Sbjct: 103 PAVIGDLLLQLGGEPALAQDAGPLVGAMAVSQVNP-----PLLDAVMRMVRLIDTPRDAA 157 Query: 177 ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236 IL I REILY +L G G L + + R + I+ + + S+E LAAEA Sbjct: 158 ILAPLIEREILYRMLLGDQGPRLAQIARADGRMRQVKRAIGWIQQNFDQPFSIEDLAAEA 217 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 MS SA H +FK+VT+ SPLQY K RL +AR +I+ + A +A VGY+SASQFSRE Sbjct: 218 RMSPSALHRHFKAVTALSPLQYQKQIRLQEARKLILVQRLDAGSAGHAVGYDSASQFSRE 277 Query: 297 FKRYFGVTPGEDAARMRA 314 + R FG P DAAR+R+ Sbjct: 278 YARLFGAPPLRDAARLRS 295 >UniRef50_A9IS89 Transcriptional regulator, AraC family n=13 Tax=Bacteria RepID=A9IS89_BORPD Length = 358 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 90/250 (36%), Positives = 138/250 (55%), Gaps = 2/250 (0%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVD 123 +Y P + +L G K + E V+ Y A+ YLL ++ LP T A+ P L++D Sbjct: 96 VYRPSLALLVQGAKRVEVGEDVYEYSASHYLLTSIDLPVASRVTLASPGTPYLCFVLDLD 155 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 L+ + G + + A G+ A L +L AA R+ +++ P D ++L + Sbjct: 156 PRDTAGLIAETGLPQPAD-TDAGRGLAVAQLCPPLLDAALRMARLLDAPQDIQVLAPLLR 214 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 REI+Y +LTG GG L + + + + ++ ++ + L +EQLA NMS S+ Sbjct: 215 REIIYRLLTGALGGRLRHIARHEGPTHQVRQAIEWLQAHFDRPLRIEQLAHTVNMSTSSL 274 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 HH+FK+VT+ SPLQY K RL +AR +++ A AAA +VGYESASQFSRE+ R +G Sbjct: 275 HHHFKAVTAMSPLQYQKQLRLQEARRLLLAGLADAGAAARQVGYESASQFSREYSRQYGA 334 Query: 304 TPGEDAARMR 313 P D AR+R Sbjct: 335 PPRRDVARLR 344 >UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein n=5 Tax=Acinetobacter RepID=B2I1B8_ACIBC Length = 294 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 155/284 (54%), Gaps = 8/284 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA V++ ++ + + + L ET + M + + ++ G K ++E + Sbjct: 11 LAQLVDQWTREKGTFETAITGLTLYRAETLTKPSSSMMDASLCMIAQGKKQVILSEETYT 70 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIG---EDEHFQPSM 144 YD+N +L + LP + A+ E P + L +D L +++++ +D + + Sbjct: 71 YDSNHFLFTAIDLPVIAQVLEASVEQPYLSIVLRLDPYLLAQIMLEAHIPFKDVNTEKKG 130 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 A G+ ++ L++ + RL+ +++ P D IL II+EI Y +L P G L +V+ Sbjct: 131 MAVGVVNSELNDAFI----RLIKLLDTPQDIPILSPLIIKEIFYRLLMSPQGDRLKRIVA 186 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 T I + ++ ++ + + S+E+LA+ MS S+FH +F+ +TS SPLQY K RL Sbjct: 187 AGTTGHRIVKAIEWLKTNFAKPFSIEELASTMGMSASSFHQHFRDITSMSPLQYQKRMRL 246 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 +AR +++ + S+ +M+VGYES SQFSRE+KR+FGV+P D Sbjct: 247 TEARRLLMTEEYDISSTSMQVGYESLSQFSREYKRFFGVSPSVD 290 >UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X2I3_OXAFO Length = 304 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/257 (33%), Positives = 143/257 (55%), Gaps = 10/257 (3%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY---ATSEVPLAGLRLN 121 YEP + ++ G K + + + Y N+ LL +V LP + Y A E P GL L Sbjct: 52 FYEPAVGVVIQGKKRSVVGSQEYHYRENDSLLNSVDLP--SKNYILDAGPEKPFLGLGLK 109 Query: 122 VDILQLQELLMDIGEDEHFQPSM--AASGINSATLSEEILCAAERLLDVMERPLDARILG 179 +D + +L I E H + G++ + ++L A RL ++++ P +L Sbjct: 110 IDKYMVGQL---ISELPHLSQNSDEPVRGLSVTPIEADLLDAFLRLTELLDNPEQIPVLA 166 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 I+REI Y +L GP G L A+ + + + I++V+ + N Y E L V++LA +ANM+ Sbjct: 167 PMIVREIHYRLLVGPRGRFLRAINTAGSQGNRIAQVISWLRNNYKEPLQVDELARKANMA 226 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S FH +FK +T+ SPLQY K RL++A+ +++ + A+ A + VGYES +QF+RE+KR Sbjct: 227 TSTFHRHFKQITTLSPLQYQKRLRLYEAQRLMLVENEYAANACLAVGYESPTQFNREYKR 286 Query: 300 YFGVTPGEDAARMRAMQ 316 FG P + ++R ++ Sbjct: 287 LFGEPPSRNIHKVREVR 303 >UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria RepID=C3X9E6_OXAFO Length = 304 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 82/253 (32%), Positives = 138/253 (54%), Gaps = 2/253 (0%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVD 123 YEP + ++ G K YI R +RY L+ + LP + AT + P G+ + +D Sbjct: 52 FYEPAVGVIIQGQKHSYIGSREYRYGEGYCLVNGIDLPAKNTILDATPDNPFLGMGIRLD 111 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 +L +I + G++ +IL A RLLD++E+P ++ I+ Sbjct: 112 KSLTTQLAAEIPPPPKTG-NEPDCGLSLTRTDPDILDAFARLLDLLEKPEQIPVMAPMIL 170 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 REI Y +L GP G L + + T + +++ + + N Y E + V++LA + NM+ S F Sbjct: 171 REIHYRLLIGPQGSFLRTVNTFGTQGNQVAQAISWLRNNYKEPVQVDELAKKVNMATSTF 230 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 H +FK +TS SPLQ+ K RL++A+ +++ + A+ A M VGYES +QF+RE+KR FG Sbjct: 231 HRHFKQLTSLSPLQFQKRLRLYEAQRLMLVENEYAANACMAVGYESPTQFNREYKRLFGE 290 Query: 304 TPGEDAARMRAMQ 316 P + ++R ++ Sbjct: 291 PPSRNINKVRELR 303 >UniRef50_Q0SK59 Transcriptional regulator, AraC family protein n=2 Tax=Corynebacterineae RepID=Q0SK59_RHOSR Length = 307 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 79/251 (31%), Positives = 136/251 (54%), Gaps = 1/251 (0%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVD 123 + EP ++I+ G K + +R++ Y A + L++T +P SE P + L + Sbjct: 46 LTEPLLVIMTQGGKRLLLGDRLYEYRAGQCLVVTASVPVTGHYIDISEGAPSLAMGLVLR 105 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 + L++ + + + I + +L AA R+L +++ P DA +L I Sbjct: 106 PAAIAALVLQAPTERWSRGAAGVPAIETGDADVHLLDAAARMLRLLDHPADAPVLAPLIE 165 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 +EIL+ +LTGP G + + + + +SR + I + Y+E + ++ LA ++MS SAF Sbjct: 166 QEILWRLLTGPHGSTIRQIGMADSDLAHVSRAIHWIRDNYSEPMRIDDLARLSSMSASAF 225 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 H +F++VT+ SPLQY K RL AR M++ + VGY+S SQF+RE++R FG Sbjct: 226 HRHFRAVTAMSPLQYQKRIRLQHARSMLVAHPGDVAGVGHHVGYDSPSQFNREYRRLFGA 285 Query: 304 TPGEDAARMRA 314 +PG+DA +R Sbjct: 286 SPGKDAHGLRG 296 >UniRef50_C3MHY3 Putative transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MHY3_RHISN Length = 313 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 87/249 (34%), Positives = 146/249 (58%), Gaps = 2/249 (0%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDI 124 Y+P + I+ G K + +F Y A++YLL ++ LP F + A+++ P + +D Sbjct: 49 YKPSLAIIVQGAKRVLLGGELFVYGASDYLLTSIDLPVFSQISLASADEPYLSMNFQIDT 108 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 ++ LL +GE P+ ++ G+ TL+ ++ AA RLL +++R + IL I + Sbjct: 109 TKIPALLDRLGEQPAASPA-SSRGMTVNTLTADLEDAALRLLRLLDRHAEMPILLPLIEQ 167 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 EILY +L GP G L + + ++ I R + ++ Y+ L ++ LA+ +MSVS+ H Sbjct: 168 EILYRLLVGPHGARLRQMTTAESQPHQIGRAVAWLKEHYSRPLRIDDLASRVSMSVSSLH 227 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 H+FK++T+ SPLQY K RL +AR +++ + + A A +VGY+S SQFSRE+ R+FG Sbjct: 228 HHFKAITAMSPLQYQKQLRLQEARRLMLEERLDAGDAGHQVGYDSQSQFSREYARHFGEP 287 Query: 305 PGEDAARMR 313 P D R+R Sbjct: 288 PMRDIGRVR 296 >UniRef50_C6D3S9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S9_PAESJ Length = 323 Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 9/285 (3%) Query: 39 KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYL--L 96 +E S ++P + ++ R P + P ++ G K Y+ + +F Y A +Y+ L Sbjct: 36 EEGRNSTIVPFLSIVKRSRDTVRCPGVLTPSFCLILQGEKKLYLGQDIFHYSAGDYVASL 95 Query: 97 LTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSE 156 L +P F AT E P GLR++ QE+ + E E S ++A + + Sbjct: 96 LDIP-AFGQVVGATEEKPYIGLRVD---FTTQEIASVVVEAEILAESKEKDLTSAAFIGK 151 Query: 157 E---ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 +L RLL ++++P +AR L + + +E+++ +L+G G + V ++ Sbjct: 152 SDANLLDIFYRLLKLIDKPKEARFLSELLKKEMIFNLLSGDFGHLFMQKVLFGQRADGVA 211 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 + + I+ YT + +VE+LA NMS S HH FK++T+ PLQY K RL +AR +++ Sbjct: 212 KAIHWIQENYTHSFTVEELAKSCNMSTSGLHHKFKAITTMGPLQYQKQLRLQEARRLMLS 271 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A+ AA+ VGYES SQF+RE++R FG P +D +R G Sbjct: 272 GPVGATTAALTVGYESPSQFNREYRRLFGQPPLQDIKTLRKASGG 316 >UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q0_PHYPA Length = 263 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 81/253 (32%), Positives = 138/253 (54%), Gaps = 10/253 (3%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATS-EVPLAGLRLNVDIL 125 +P + I+ G KI + ++Y ++YL +++ +P + S E P +RL++D Sbjct: 9 KPSLCIVAQGEKIIILGNESYKYGVSDYLAVSLDVPISGQVIKPSPEAPFLSIRLDLDAG 68 Query: 126 QLQELLMDIG----EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 ++ E++ + EH+ S+ +N +L A RL+ +++ P D L Sbjct: 69 EIFEIMKETHLFPESIEHYPKSLFVGKMNI-----NLLDAVIRLVRLLDTPKDILALAPL 123 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 II+EI+Y +LT G + + +HF+ I+ V++RI+ + + L + +LA ANMS S Sbjct: 124 IIKEIIYRLLTEKEGDVFKQIATSGSHFATIAEVVERIKTNFDKPLRINELAQIANMSTS 183 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 + + +FK VT+ +P+QY K RL + R ++I D + A VGYES SQFSRE+ R F Sbjct: 184 SLYRHFKQVTAMTPVQYQKQLRLQEGRRLLITDKYNVADVAFHVGYESPSQFSREYARLF 243 Query: 302 GVTPGEDAARMRA 314 G P D RM++ Sbjct: 244 GCPPTTDILRMQS 256 >UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1Q9Q6_PSYCK Length = 284 Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 146/276 (52%), Gaps = 6/276 (2%) Query: 36 LKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYL 95 LKNK ++ +P++ + P + EP I I+ G + Y+ + ++D + + Sbjct: 14 LKNK--TIESTIPNLFFYCADRPSKTVSYIQEPSICIVLQGEREIYLGKDCQKFDNSSLM 71 Query: 96 LLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL 154 V +P +A+S+ P+ L + ++++ +QE+L I + + GI L Sbjct: 72 FCPVDIPLSMHIKHASSDHPVIVLSMKLNLVMIQEVLARIPPQQQVKEGYL--GIK-WQL 128 Query: 155 SEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISR 214 + I+ A ERL+++++ P D L I +EI Y +L+ G L LV +H I++ Sbjct: 129 DDAIMQAFERLVNLLDCPNDTGFLSSLIQQEIYYRLLSAQQGNKLRQLVINGSHTHRIAQ 188 Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 ++ E + + LA+ MS+S FH +FK +T SPLQY K RL +AR +II + Sbjct: 189 ATDWLKAHLDEPVVIGDLASRCGMSISGFHQHFKEITQLSPLQYQKKLRLMEARRLIITN 248 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 + S AM+VGYES SQFSRE+KR FG +P D + Sbjct: 249 DSQISQIAMQVGYESPSQFSREYKRLFGNSPNSDLS 284 >UniRef50_Q15RK2 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q15RK2_PSEA6 Length = 297 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 153/294 (52%), Gaps = 19/294 (6%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M +E I +L+ K + E +SG V+L P P +YEP + + SG K Sbjct: 1 MSKELIRQLIDAKAGQSGMIETRISG----VQLFKITEPIRCAPALYEPSVTAIVSGGKE 56 Query: 80 GYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDI---- 134 N YD N+Y+ T+ +P E T A+ + PL G+ ++++ + EL +++ Sbjct: 57 AIWNGNKHYYDKNKYICCTMSMPIEAGTPEASPDNPLMGVYISLNTRVMTELAIELESAT 116 Query: 135 GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 G + S+ GI++A E A RL+ + + D ILG IRE+ Y +L G Sbjct: 117 GVTYKVKESVHPQGISTANWDEAFTDALYRLIMLEKSTTDIAILGSSRIRELYYAILKGD 176 Query: 195 CGGALLALVSRQTHFSL---ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 G A+ + F + I+R ++ + + E++++E LA + MS + FH FK T Sbjct: 177 SGYAV------RRSFGVGNEIARSIELLSSNLNESVTIENLAHQVGMSRAVFHRKFKQAT 230 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 S SP+Q++K+ RL+ A M I +G + AAM VGY S+SQFSR+FKR +G P Sbjct: 231 SMSPIQFVKSMRLNNAAMK-IAEGRNVNVAAMEVGYVSSSQFSRDFKRMYGQAP 283 >UniRef50_A6UG08 AraC-type transcriptional regulator domain protein n=2 Tax=Sinorhizobium RepID=A6UG08_SINMW Length = 318 Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 153/297 (51%), Gaps = 17/297 (5%) Query: 22 REEICRLLA---DKVNKLKNKENSLSGLLPDV---RLLYGETPFARTPVMYEPGIIILFS 75 REE L A D+++KL S +P + R++ PF+ +YEP + + Sbjct: 12 REETAPLRAQILDRLSKLPWDGLSFEHPIPGLSLYRIIQPAGPFSS---VYEPSLSFIIK 68 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMDI 134 G K + YD + L + LP + A SE P L +D+ +++ ++ D Sbjct: 69 GSKNVRVGNETMVYDEGCFFLTAIGLPVTGQICAASEREPYVAAALRLDMEKVRRIIAD- 127 Query: 135 GEDEHFQPSMAAS---GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 D H P+ G+ T + E+ A RL+ + P D L I EI+Y +L Sbjct: 128 -HDIH--PTDLPERDLGVAVGTATCELFDALFRLISLAGAPADIPFLAGHIQNEIIYRLL 184 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 TG G L T+ + +++ + ++ YT+ L VE+LA ANM VS HH+F+++T Sbjct: 185 TGEQGARLRRFALAGTNSNRVAKAVAWLKENYTKQLRVEELAEIANMGVSTLHHHFRAMT 244 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 + SPLQ+ K+ RLH AR +++ + A+ AA+RVGYES +QF+RE++R FG P D Sbjct: 245 AMSPLQFQKHLRLHHARELMLSQSLDAATAALRVGYESPTQFNREYRRAFGHPPLRD 301 >UniRef50_A9GMF7 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9GMF7_SORC5 Length = 310 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/296 (30%), Positives = 150/296 (50%), Gaps = 9/296 (3%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + + R + D +K N + +P +R++ P +Y P + ++ G K + Sbjct: 2 DNLRRAVRDYASKHANGDGLALTKVPGLRMMCVHAPSGPLHSIYRPLVCLVLQGAKRMLV 61 Query: 83 NERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQEL---LMDIGEDE 138 E +++T +P S+ P L + +D+ ++E+ L ED Sbjct: 62 GSEERIVSRGESVIVTADMPVTGRIVQASQSEPYLALAVELDVALIREIASGLSSTAEDG 121 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 P + + I+ E +L A RL+ ++ RP +L I RE+ Y++L+GP G Sbjct: 122 SKAPPLLVANID-----EVVLDCALRLMRLLGRPEAIPLLHPGIARELHYWLLSGPHGAV 176 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L AL + S ++ + + +Y + V +LA A MS +AFH FK +TS +P+Q+ Sbjct: 177 LRALSLPTSSASRLAAAVAMLRAEYRTRIPVRRLAKSAGMSSTAFHVQFKRLTSLAPIQF 236 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RL +AR +++H+G+ A+AAA VGYESASQFSRE+ R FG P DA R R+ Sbjct: 237 QKRLRLMEARRLMVHEGVSATAAAFEVGYESASQFSREYARLFGAPPKRDALRARS 292 >UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM7_9GAMM Length = 309 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/303 (32%), Positives = 157/303 (51%), Gaps = 5/303 (1%) Query: 20 MKREEICRLLADKVNKLK---NKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 M + + R +AD +L KE+ + D+ L++ P P++Y P + + G Sbjct: 1 MSDQYLTRRMADLTQRLLPLLTKESLTQTAIDDISLMHLSNPSQVRPIIYRPAVCFMLQG 60 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIG 135 K + Y+ YLL+ V P + A+ + P GL N D +L+EL++ +G Sbjct: 61 AKELLVGNTKVTYEQMNYLLIPVVFPVSGRVSQASPDNPYVGLSFNFDTAELRELILLLG 120 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 D + S + + E++ ER +++E+P DA++L I RE++Y +L G Sbjct: 121 -DRIPATVKSQSSLCVGKVDSEMMQLLERATELLEKPDDAKVLFPLIRRELMYRLLLGEL 179 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 GG L T S I++ + I+ + E L V+ LA+ ++S SAF+ FKSVT+ SP Sbjct: 180 GGLLRDFNLIDTQASRIAQAIDIIKRRLHEPLRVKDLASAVHLSESAFYQAFKSVTAMSP 239 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +Q+ K RL +AR +++ +G S A +VGYES SQFSRE+ R FG +P D R Sbjct: 240 IQFQKKLRLDEARRIMLFEGSDVSTACYQVGYESPSQFSREYSRLFGQSPKADINDFRIS 299 Query: 316 QGN 318 G+ Sbjct: 300 SGS 302 >UniRef50_B1K2F3 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=B1K2F3_BURCC Length = 299 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 88/254 (34%), Positives = 143/254 (56%), Gaps = 5/254 (1%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLN 121 P +Y P + ++ GHK + +RV +Y Y ++T LP AT + P L L+ Sbjct: 41 PNVYRPQLCLVAQGHKEVTLGDRVLKYAPGRYGVVTYDLPATGRVVDATPDKPYLCLYLD 100 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 D + L +L + + ++ A +L AA RLL +++ P +LG Sbjct: 101 FDPVMLADLALRVPPLPEAPSPPVGKTVSDA--GAALLDAALRLLRLLDNPAALPVLGPL 158 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 +EILY++L GP G + + + Q + + R + + + E S+++LAAEA MS S Sbjct: 159 AEQEILYHLLAGPDGARMRHITAGQGRVAQVGRAIAWLGKHFRERFSIDRLAAEAGMSPS 218 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKAR-MMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 + H +F++VT+ +PLQ+ K RL +AR +M++HD + + AA+RVGYES SQFSRE++R+ Sbjct: 219 SLHEHFRAVTAMTPLQFQKQLRLQQARSLMLVHD-IDVTTAAIRVGYESPSQFSREYRRH 277 Query: 301 FGVTPGEDAARMRA 314 FG +P D R+RA Sbjct: 278 FGESPARDITRLRA 291 >UniRef50_A6W3U9 AraC-type transcriptional regulator domain protein n=4 Tax=Proteobacteria RepID=A6W3U9_MARMS Length = 336 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 90/268 (33%), Positives = 132/268 (49%), Gaps = 4/268 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P + +L P P +Y+P I ++ G K I ++V Y A + + +V LP E Sbjct: 53 IPRLDILRVCQPTELFPEIYQPLISLILQGSKRIVIGDQVVDYRAGQSFITSVELPVIGE 112 Query: 107 TYATSEV-PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 +S P LRL++D + E+L ++ + G +SE++ A R+ Sbjct: 113 VVESSPASPYLALRLSLDRALVTEILCEMDSPLSLSET---RGFCIDQVSEDLADAWYRM 169 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 + + + P D ++ I REILY +L GP G L + F I + I Y Sbjct: 170 IRLTDHPEDIDLIAPLIEREILYRMLRGPQGAVLRQIAGIDDRFFQIRNAITWIRKHYAT 229 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 VE+LAA NMS SAFH FK+ SPLQY K RL++AR M+ + + A+ V Sbjct: 230 AFRVEELAATVNMSPSAFHRRFKATVGLSPLQYQKQIRLYEARRMLFTELGGVTTVALSV 289 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMR 313 GYES SQFSRE+ R FG P D +R Sbjct: 290 GYESLSQFSREYSRLFGAPPARDIRTLR 317 >UniRef50_Q396P4 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. 383 RepID=Q396P4_BURS3 Length = 299 Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 82/254 (32%), Positives = 129/254 (50%), Gaps = 3/254 (1%) Query: 62 TPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRL 120 P++ +P + ++ G K R + Y L+++V +P SE P GL L Sbjct: 41 APLIMKPALCVVVQGGKWTTFGGRRYDYGPGRALVVSVEMPATSRIVKASESEPFLGLVL 100 Query: 121 NVDILQLQELLMDIGEDEHFQPSMA-ASGINSATLSEEILCAAERLLDVMERPLDARILG 179 D+ ++E+L + + QP A G+ + R++ +++ P ++ Sbjct: 101 EFDLAMMREVLERL-DTPPPQPHGAIGHGVCVTDFGGPLADCVLRMMRLLDTPAAIPVVA 159 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 + REI Y++L GP GG + +V H + + + ++ E + VE LAA A MS Sbjct: 160 PLVKREICYWLLAGPHGGEVSRVVFANGHAQRVVAAIHALRGQFAEAIRVEDLAAVAQMS 219 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 SAFH FK++TS +PLQY K RL +AR +++ A AA RVGYESASQFSRE+ R Sbjct: 220 PSAFHRQFKALTSMTPLQYQKQLRLLEARHLMVTGAANAETAAYRVGYESASQFSREYAR 279 Query: 300 YFGVTPGEDAARMR 313 FG P D ++ Sbjct: 280 MFGAPPRRDVVTLK 293 >UniRef50_B0T5I6 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T5I6_CAUSK Length = 303 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/251 (34%), Positives = 131/251 (52%), Gaps = 5/251 (1%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDIL 125 +P + ++ G K + R+ RYD + + LP C A + P + +++D Sbjct: 51 DPMVCVVLQGAKQVLVGGRLLRYDPSHSFASVIGLPATGCVLEAAPDKPYVAIGMSLDRT 110 Query: 126 QLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIRE 185 L EL++ Q A+G AT+S +L A L +++ P D L K RE Sbjct: 111 ILAELVLAAPRGTRPQ---RAAGFGVATVSPGLLEALNSFLSLLDYPEDIPALAKGRERE 167 Query: 186 ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 + Y +L G L + + FS I +V+ + ++LS E LA A MSV +FH Sbjct: 168 VAYRLLQSEHGPMLRQAIHVEGQFSKIHQVIAWMRQDLDQHLSGEDLARRAGMSVPSFHR 227 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +FK+ T+ SPLQY K RLH+AR ++I + A+ A VGYES SQFSRE+ R FG +P Sbjct: 228 HFKAATAMSPLQYRKTLRLHEARKLLITNA-DAAKTAYAVGYESPSQFSREYSRLFGTSP 286 Query: 306 GEDAARMRAMQ 316 DAAR+R ++ Sbjct: 287 ARDAARLRGVE 297 >UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMS2_VARPS Length = 330 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 136/246 (55%), Gaps = 4/246 (1%) Query: 68 PGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQ 126 P + ++ G K + + ++ YD YL+ +V LP + TS+ P G+RL + I + Sbjct: 69 PALGLIAQGSKRIIVGDDIYVYDPMHYLVTSVDLPVCGQVRLTSDNEPYLGVRLELAIDE 128 Query: 127 LQELLMDIGEDEHFQPSMAAS-GINSATLSEEILCAAERLLDVMERPLDARILGKQIIRE 185 + +L+ D E + + AS G+ + +L RLL ++E P D I+ I RE Sbjct: 129 IGKLIGD--EKLPAKANAPASRGMYVNRIGMPVLEPVLRLLRLVESPEDVPIMAPLIKRE 186 Query: 186 ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 I+Y +L G L + + +H I++ + + Y+++L +E +A +MSVS+FHH Sbjct: 187 IMYRLLVNGEGARLRQIALQDSHTQRIAKAISALRINYSQSLRIEDMARAVHMSVSSFHH 246 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +FK+VT+ SPLQY K RL +AR ++ G S+AA VGYES SQF+RE+ R FG P Sbjct: 247 HFKAVTAMSPLQYQKQLRLQEARRQMLMAGADVSSAAHSVGYESPSQFAREYSRMFGAPP 306 Query: 306 GEDAAR 311 D R Sbjct: 307 LRDKRR 312 >UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=Thermotogaceae RepID=A5INH3_THEP1 Length = 299 Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/270 (32%), Positives = 150/270 (55%), Gaps = 10/270 (3%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 LP + + E+P + + P I I G K I E + YD +LL + +P + Sbjct: 28 LPGLTVGRRESPTEPSTYILPPSICIAVQGAKRVLIGEEYYVYDVENFLLNSFDIPVIAQ 87 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF--QPSMAASGINSATLSEEILCAAE 163 A+ E P G+ +D+ E+LM+I ++ +P ++ G + ++ ++L A + Sbjct: 88 VIEASKEKPYIGITWEIDM----EILMEIVVEQKLNTRPIASSRGTSLGKVTYQLLDAFK 143 Query: 164 RLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKY 223 R+LD+++ P L I +EI+Y +L G L+ + + + + L ++ + Sbjct: 144 RMLDLLDEPEHISALLPVIKKEIIYRLLVSEQGSKLIQIALSGKNDVIAA--LNYLKEHF 201 Query: 224 TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAM 283 +E +++++LA MSVS F+ NFK++T +PLQY K RL +AR +++ G + AA Sbjct: 202 SEPVNMKKLAEMVGMSVSTFYQNFKTLTGMTPLQYQKKLRLCEARKLLMA-GHDVTTAAY 260 Query: 284 RVGYESASQFSREFKRYFGVTPGEDAARMR 313 +VGYES SQFSRE+KR+FGV+P +DA R+R Sbjct: 261 QVGYESLSQFSREYKRFFGVSPSQDAKRLR 290 >UniRef50_C3KMN9 Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KMN9_RHISN Length = 321 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 8/297 (2%) Query: 18 RDMKREEICRLLA---DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 R REE L A D++ +L +P + L P +YEP + ++ Sbjct: 10 RQRLREETAPLRARILDELAQLPWDGLRYGHAVPGLSLYRVVEPAGPFSAVYEPSLSLII 69 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFE---CETYATSEVPLAGLRLNVDILQLQELL 131 G K ++ + YD + + L + LP CE A+ + P L +D+ +L+ ++ Sbjct: 70 QGSKRVHVGSQTLVYDESCFFLTALGLPATGQICE--ASLDEPYVAASLRLDLEKLRRII 127 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 D P G+ + + A RL+ + P D L I EILY +L Sbjct: 128 ADHDLHPTDTPERDLVGVAVGAATPLLFDAFLRLISLANAPGDIPFLANHIHNEILYRLL 187 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 TG G L T+ + ++R + ++ YT L VE+LA ANM VS HH+F+++T Sbjct: 188 TGEQGARLRRFALAGTNSNRVARAVAWLKENYTRPLRVEELAEIANMGVSTLHHHFRAMT 247 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 + SPLQ+ K+ RLH A +++ + A+ AA+RVGYES +QFSRE++R FG P D Sbjct: 248 AMSPLQFQKHLRLHHAGELMLSQSLDAATAALRVGYESPTQFSREYRRAFGHPPLRD 304 >UniRef50_B0S9N6 Transcription regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9N6_LEPBA Length = 295 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 86/273 (31%), Positives = 136/273 (49%), Gaps = 4/273 (1%) Query: 42 SLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPL 101 +L+G+ P V ++ GE P + +YEP + ++ G K I ++ + Y ++ + Sbjct: 20 TLTGI-PRVLMIQGEVPEHQLAAVYEPLVGLVVQGGKTISIGRQMVPMEGPSYFVIPTEM 78 Query: 102 PFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 P A + P + L +D L +LL D F+ AT E L Sbjct: 79 PATGSVRQAKNGRPYLSVALQLDQKVLLDLLKDTPNTVAFKNDTDEFSACPAT--PEFLE 136 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 R+L +M+ P L REILY+VL GP G L L S I + ++ + Sbjct: 137 VWLRMLRLMKTPEHIAALAPAYEREILYHVLIGPEGWRLRQLFQSHQKGSSIHQSIQWVR 196 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 +T + +E LA +A M ++ FH FKS+T SP+Q+ K RL +AR ++ + G + Sbjct: 197 QHFTHSFEIEDLANKACMGITTFHRQFKSITGLSPIQFQKQLRLLEARKLLTYSGYSVTD 256 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 AA+ VGYES SQF+RE+ R+FG +P D R++ Sbjct: 257 AALDVGYESTSQFNREYTRFFGASPARDTKRLK 289 >UniRef50_C0N265 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N265_9GAMM Length = 302 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 159/302 (52%), Gaps = 10/302 (3%) Query: 13 IPKKLRDMKREEICRLLADKVNKLKNKENSLSGLL---PDVRLLYGETPFARTPV-MYEP 68 +PK+ K E+ +L +K+ KL ++ GL P VR+L + A+ + +P Sbjct: 1 MPKQNHQDKNNEL--MLRNKLAKLISQYAPADGLFEVCPGVRVLRESSQDAKPARNISQP 58 Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQL 127 G+ I+ G K + +F YD + ++ + +P A+ + P L +++ +L Sbjct: 59 GMCIVAQGAKRVVLGNDIFEYDNSRMVVYSTEVPISANIIRASIDEPYLCLIIDITPQKL 118 Query: 128 QELLMDIGEDEHFQPSMAAS-GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREI 186 EL H P + S I+ + +I+ A RLL++ P D +L ++ EI Sbjct: 119 AELTAKAFP--HGLPRVPESRAIHIGPTNPKIVDAGIRLLELFSEPDDVDLLIPLVLDEI 176 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 +L G + + ++ +S+ + + Y + + V+QLAA NMSVSAFH + Sbjct: 177 FIRLLRSHIGALVAQIGITDSNLQKVSKGISWVREHYAQPMKVDQLAAHVNMSVSAFHQH 236 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK+VT+ SPLQ+ K RLH+A+ +++ M S+A+++VGY S SQFSRE+ R FGV+P Sbjct: 237 FKAVTTMSPLQFQKELRLHEAKNLMLSKMMDVSSASLQVGYASVSQFSREYSRLFGVSPS 296 Query: 307 ED 308 +D Sbjct: 297 KD 298 >UniRef50_C9PHT7 Transcriptional regulator AraC family n=2 Tax=Gammaproteobacteria RepID=C9PHT7_VIBFU Length = 296 Score = 136 bits (343), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 10/292 (3%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L ++V +KE S +P + + TP A +Y G ++ G K I++R Sbjct: 10 LVEQVRAYSSKEGSYVTDIPGLEVHIRNTPTAPLHCIYSLGFSLILQGSKQLAIDDRQVP 69 Query: 89 YDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVD---ILQL-QELLMDIGEDEHFQPS 143 +A + +L T P T AT P + L +D I+Q EL +D D HF+ Sbjct: 70 VEAGQSMLTTFDTPIVSHVTEATRHQPFLAIVLKLDYDLIMQTCTELKLD-KPDRHFE-- 126 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 I+ + + I RLL + + P L I +E++ +L GP G L + Sbjct: 127 --YQSISIQNMDDGIYRTMSRLLALEQEPEYLASLVPLIKKELVIRLLHGPHGTQLRHIA 184 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S + + I +++ ++ +TE + + +LA +A+MS S+F +FK++T +SPLQY+KN R Sbjct: 185 SVGSPSNHILKIVTWMKKNFTETVGMNELAGQAHMSASSFRVHFKALTGSSPLQYMKNLR 244 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 L +AR ++ +G+ A+ A+ VGYESASQFSRE+ R FG+ P +D R+R + Sbjct: 245 LQEAREQMLLNGLDATQASNLVGYESASQFSREYSRLFGLPPQKDIQRLRQI 296 >UniRef50_Q65QP8 AraC protein n=7 Tax=Pasteurellaceae RepID=Q65QP8_MANSM Length = 302 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/291 (31%), Positives = 151/291 (51%), Gaps = 19/291 (6%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + RLL D + + + + GL+ + + + PF+ V+ EP I I+ G + + Sbjct: 22 QSFARLL-DVIPHNQTYHSPIKGLI----IHHSDHPFSYDNVIQEPSICIVIRGEREVQL 76 Query: 83 NERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + + +D ++ V +P + AT+E P + + +D+ + ++L++ Q Sbjct: 77 GNQCYLFDNRHFMFCPVNVPMCGKVLQATAEEPFVVMSMKIDLQAVNKILLE-------Q 129 Query: 142 PSMAASGINSAT------LSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 ++ A + T L E+ A ERLL + E D L I +EI Y +LTG Sbjct: 130 TALLAKNSENPTAFGQWHLDAELENAFERLLLLHENTKDITFLAPLIQQEIYYRLLTGEQ 189 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L +VS ++ I++ + ++ Y E ++VE LA MS+S FH++FK T+ SP Sbjct: 190 GDKLKQMVSFGSNTQKIAKATEYLKAHYIETITVESLAELCGMSLSGFHNHFKKHTTLSP 249 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 LQY K+ RL +A +I + + S AA +VGYES SQFSRE+KRYFG P Sbjct: 250 LQYQKSLRLMEANRLISQENLPISTAAFQVGYESPSQFSREYKRYFGKAPS 300 >UniRef50_A3YHM2 Putative transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YHM2_9GAMM Length = 293 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 11/296 (3%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M E+ L + ++ LS +PD + + P +Y P I+ G K Sbjct: 1 MTLAELLALATHYIESQTMDDDELSSPIPDFFVHQSKKPTQLNACIYHPIACIILQGSKE 60 Query: 80 GYINERVFRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDILQLQELLMDIGE-- 136 + Y A L+ + +P F A+ E P GL + +D+ L+ L +IGE Sbjct: 61 AIVGGEKISYRAGMSLIASHSVPAFSSIVEASEEAPYIGLAICLDLGILRSLQREIGELD 120 Query: 137 --DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 ++ F+P AA S+ ++ A R + +PL+ +++G I++EI + +L Sbjct: 121 ILNKTFKPLCAAQS------SDALIDAMGRYFALAGKPLEMKVMGPLILKEIHFLLLKSS 174 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G L L + +H S +++ + I + LS+ +A MS S+F+ +FK VT ++ Sbjct: 175 NGDMLRHLTEQDSHVSKVTQAIDVIRQNFKTALSMPDIAKNIGMSTSSFYEHFKQVTKST 234 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 PLQY K RL +A+ +I + SAAA VGYES +QFSRE+ R FG TP ++ A Sbjct: 235 PLQYQKELRLIEAQRLIREENTSVSAAAFEVGYESPTQFSREYSRKFGNTPRQELA 290 >UniRef50_Q021U2 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021U2_SOLUE Length = 316 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 10/295 (3%) Query: 24 EICRLLADKV--NKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E+ R+LA ++ + + E+S S +P + L +P YEP + + G K Sbjct: 17 ELRRVLAARIAGHAVSGGEHSTS--VPGLTLYRRISPSPCHRGSYEPSLNVFAQGRKRIN 74 Query: 82 INERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQLQELLM--DIGEDE 138 + + D + +L+ ++ +P + + SE VPL + L +D+ + E+L D+ E Sbjct: 75 LGGTEYLCDGSSFLVSSIDIPVQSQIVEASEDVPLLSMLLRLDMAMVGEVLSREDLPEP- 133 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 Q S G+ + +L A RL++ ++ P D L I REI+Y VL G Sbjct: 134 --QGSSHHHGLAVGATTTGLLGACIRLMETLDTPEDIPFLSPLIQREIIYRVLRTEQGQR 191 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L A+ +R ++ + ++ YT+ L +E+LA + M VS HH F+++T+ SPLQY Sbjct: 192 LRAIATRGDLSHRTAKAIAWLKANYTKPLRMEELAEVSRMGVSTLHHQFRALTAMSPLQY 251 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K RL AR ++ +G+ A+ AA VGYES SQFSRE+ R+FG P D +R Sbjct: 252 QKQLRLQAARQRMLTEGIDATRAAYDVGYESVSQFSREYSRFFGQPPMRDIRALR 306 >UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CSL0_PAESJ Length = 301 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/251 (34%), Positives = 133/251 (52%), Gaps = 8/251 (3%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQL 127 I +F G K + E F Y +EYL+ +V LP A+SE P L+L Q+ Sbjct: 53 SICFVFQGKKEVSLAEERFPYSPDEYLVASVELPVISRILEASSERPYLALKLEFSPEQI 112 Query: 128 QELLMDIGEDEHFQP---SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 ++ + G QP A G+ + + A RL+ ++E+P D +L +I+ Sbjct: 113 LGVMKESG----IQPRPQEHARRGLFIGQMERSLTDAIHRLVQLLEQPDDIPLLAPLLIK 168 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 EILY +L G +L L I V+ I+ Y +++ ++LAA ANMSV + Sbjct: 169 EILYRILQSKHGVSLEQLALEGGGAFRIKEVIDHIKKNYEKSIRSDELAAIANMSVPTLY 228 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 +FK VT+ SP+Q+ K+ RL AR +++ + + A+ A RVGYES SQFSRE+ R FG++ Sbjct: 229 RHFKEVTAMSPIQFQKHLRLQAARSLLLSEPVNAADVAFRVGYESPSQFSREYARMFGLS 288 Query: 305 PGEDAARMRAM 315 P +D R+R Sbjct: 289 PIQDIKRLRTF 299 >UniRef50_A0RQF6 Transcriptional regulator, AraC family n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RQF6_CAMFF Length = 297 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 90/290 (31%), Positives = 159/290 (54%), Gaps = 15/290 (5%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVM---YEPGIIILFSGHK 78 R+EI +L+ LK K N + D++ L T T + YEP I ++ G K Sbjct: 4 RDEILKLI------LKTKAN-YGEIQTDIKQLSFYTAIKPTEFLNTIYEPSICVIIQGQK 56 Query: 79 -IGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGE 136 +G+ N+ ++ Y+ ++YLL T +P + A+ + P L + + + E++ ++G+ Sbjct: 57 AVGFGND-LYSYNPHKYLLATTYIPARIQIEKASKDQPYISLVIKLKPESIYEVIKEVGD 115 Query: 137 DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPC 195 + +G+ + L + +L A + + ++E+P DA L I++EI+Y +L Sbjct: 116 FKIQNKKNIKNGLCFSDLDDTLLEAIAKFVKLIEKPKNDAEFLSNLILKEIIYLILK-QN 174 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L + + ISR + I+N + EN+++++L+ E +S S + NFK +TS SP Sbjct: 175 GDLLKQYILEGNLANQISRAIMAIKNSFNENINMKKLSKEIGISESLLYQNFKKITSLSP 234 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 LQ+ K RL +A+ ++I ++AS A +VGYES SQFSRE+ R FG++P Sbjct: 235 LQFQKKIRLEEAKNLLISTNLEASQIAFKVGYESPSQFSREYARMFGMSP 284 >UniRef50_B8DSD0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSD0_DESVM Length = 299 Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 16/258 (6%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP--FECETYATSEVPLAGLRLNV 122 Y P + ++ G K I Y +++ V +P F T+A+ + P L + + Sbjct: 50 FYHPIVALIVQGFKRSMIGNHDADYGERHSMVVGVDMPGIFHI-THASQQNPFLSLSVRL 108 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSAT------LSEEILCAAERLLDVMERPLDAR 176 D + +L ++ PS+ S A SEE+L A RL+D+++ P Sbjct: 109 DRRIISQLATEM-------PSIVTSDNKPANPVAISEASEELLEAFIRLVDLLDTPSRIP 161 Query: 177 ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236 + I+REI +++L+G G L + T S I++ + + YT +L +E+LA + Sbjct: 162 VFAPMILREIHFHLLSGSQGDCLRLFSTGGTQTSQIAQAITWLRENYTGHLHMEELARQV 221 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 NM+ S F+ +FK VTS SPLQ+ K RL++A +++ +G A AA+ VGYES SQFSRE Sbjct: 222 NMAPSTFNRHFKQVTSLSPLQFQKRLRLYEAERLMLLEGKDAGTAAVMVGYESGSQFSRE 281 Query: 297 FKRYFGVTPGEDAARMRA 314 +KR FG P D A+ R+ Sbjct: 282 YKRQFGAPPRRDVAQKRS 299 >UniRef50_A4BKJ5 Probable transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BKJ5_9GAMM Length = 297 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 153/284 (53%), Gaps = 13/284 (4%) Query: 30 ADKVNKLKNKENSLS-GLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 ADK ++L N+ + G L VR P A +Y P + ++ G K + ERV Sbjct: 13 ADK-HRLSNEPTPIGVGGLSIVR---SREPSALMNTLYNPLLCLVLQGQKEARLGERVVT 68 Query: 89 YDANEYLLLTVPLPFECETYATSEV-PLAGLRLNV--DILQLQELLMDIGEDEHFQPSMA 145 + A E L++++ +P + A S P L L + D ++ + +++ +D+ + Sbjct: 69 FSAGESLIVSINIPTVSQVTAASPAKPYVALALEICLDTIRAIQAELELSDDDVADNASI 128 Query: 146 ASGINSATLSEEILCAAERLLDVMERP-LDARILGKQIIREILYYVLTGPCGGALLALVS 204 ASGI+ E++ A +RL ++ +R ++ +I+ ++REI + +L GG L L Sbjct: 129 ASGISGG----ELVQAVKRLFELRDRSYVEQKIMAPILLREIHFRLLLESHGGMLRRLAY 184 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 +H S I+R + +++ + E + V+ LAA MS S+FH +FK+VT+T+PLQ+LK+ RL Sbjct: 185 PDSHESRINRAILKLQKDFAEPICVQDLAALVGMSASSFHEHFKAVTATTPLQFLKDVRL 244 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 A+ ++ + S VG+ES + FSRE+ R FG P ++ Sbjct: 245 LVAQQKLLATALSVSTVGFEVGFESTAHFSREYARKFGYPPSQN 288 >UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q880S7_PSESM Length = 313 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/273 (31%), Positives = 136/273 (49%), Gaps = 4/273 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +PD+ + T +YEP + I+ G K E+ + + + +V +P Sbjct: 40 IPDLTFYRMDKLATPTYCIYEPCVAIILQGAKEITFGEQACEFAQGSFFVTSVDIPTLAR 99 Query: 107 TYATSE-VPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 A SE P + L +D+ L +++ + + + A G S S E+L A RL Sbjct: 100 VTAASEQTPYLSIVLKLDLSMLNDVIQTQAPLKQ-EATPEARGFASGMASSEMLDAFARL 158 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSL-ISRVLKRIENKYT 224 + +PL+A ++ I REI +L C G L V+R + I R ++ ++ Y Sbjct: 159 SALTGQPLEAGLMSDLIKREICVRLLLS-CAGQWLRSVTRDGYRDKGIVRAIEWLKLHYD 217 Query: 225 ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMR 284 E L V QLA + M+ S HHNF+ +T TSP+QY K+ RL AR +++ + + + AA+R Sbjct: 218 EPLHVAQLAQLSGMASSTLHHNFRKLTGTSPVQYQKSLRLQAARSLMLTERVDVNTAALR 277 Query: 285 VGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 VGYES +QFSRE+ R FG P D R G Sbjct: 278 VGYESVAQFSREYARRFGAPPSRDIKYAREAGG 310 >UniRef50_C1TR85 Transcriptional regulator, AraC family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR85_9BACT Length = 244 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 45/273 (16%) Query: 40 ENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTV 99 E ++GL+ L+ G +P + I ++ G K ++ E + YD +L+ +V Sbjct: 14 ETEIAGLV----LIRGNSPTEPLSYTMDSSICLIAQGRKRIFLGEESYIYDDRYFLITSV 69 Query: 100 PLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEIL 159 LP + SE P+M L Sbjct: 70 DLPVVAQVLEASEA---------------------------TPNM--------------L 88 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI 219 A RL+++++ P D +LG I REI Y +L G G L +V+ H I+ ++ + Sbjct: 89 EAFLRLVNLLKSPEDLPVLGLMIKREIFYRLLVGEQGPKLRRIVTAGNHSHSIASTIEWL 148 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 + + + +++LA+ + MS S FHH+F+SVT+ SPLQ+ K RL++AR +++ + + A+ Sbjct: 149 RRNFADQIKMDELASRSGMSQSTFHHHFRSVTAMSPLQFQKRLRLNEARRLMLTERLDAA 208 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 AA +VGYES SQFSRE+KR FG P +D M Sbjct: 209 TAAFQVGYESPSQFSREYKRLFGTPPAQDVKNM 241 >UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KE48_PSEF5 Length = 323 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 6/307 (1%) Query: 10 CRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG 69 C + M + LA + + +P++ L TP + P +Y G Sbjct: 17 CTVATSDCPPMTQPRTPTALAALIARHTPHSGDFPSAVPNLTLHRRSTPTSAIPCIYSLG 76 Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQ 128 + ++ G K + E V Y A + +L ++ P T ++ P G+ L +D + Sbjct: 77 LGVIAQGGKQVLLQEAVINYRAGQGMLTSIDQPVVARVTQGSAAEPFLGMMLTLD---MH 133 Query: 129 ELLMDIGEDEHFQPSMAAS--GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREI 186 ++L + + PS A+ + L + A ERL+ +++ P L I +EI Sbjct: 134 QILQTAAQMQPPPPSRASDYRTVVVDELEPGLASALERLVGLLDEPALIPQLAPLIQQEI 193 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 + +L GP AL L++ + I + + ++ +T+ L V+ LA A+MS S F + Sbjct: 194 IVRLLAGPYSLALQQLLAVGSPTQQIFKTVAWLKQNFTQPLRVDDLAQRAHMSPSTFRQH 253 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 F+++ SPLQ+ K RL +AR +++ + A AA VGYESASQFSRE+ R FG P Sbjct: 254 FRAIIGVSPLQFHKQLRLQEARQLMLSQNIDAGRAAGLVGYESASQFSREYSRVFGAPPQ 313 Query: 307 EDAARMR 313 D RMR Sbjct: 314 RDIRRMR 320 >UniRef50_B0KFF0 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=B0KFF0_PSEPG Length = 321 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 85/291 (29%), Positives = 146/291 (50%), Gaps = 8/291 (2%) Query: 25 ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 +CR+ + L + + D+ + P + EP I+++ G K I Sbjct: 23 LCRV----IGALAPTAGDFATSIADLSVYRRNAPAPPITCIIEPSIVLVVQGAKEMVIGS 78 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGE-DEHFQP 142 VF YD +L+ ++ +P T A+ P GL +D+ L EL+ G + Q Sbjct: 79 DVFPYDRTRFLVTSLNIPAHSAVTMASDAAPCLGLVFKLDLRTLSELIAQDGRLPLNGQA 138 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 ++G+ LS ++ + RL+ ++E P +L I REI Y +L L + Sbjct: 139 FHTSAGVGK--LSSKLFESFARLIQLLEEPDAIPVLWPLIQREIHYRLLLSDQAPLLRHI 196 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 S + I++ + ++ Y L V++LA+ M +S FH +F+ +T+ SPLQY K Sbjct: 197 ASVGSKGHRIAKAIDWMKLNYAAPLRVDELASRVQMGLSTFHQHFRQLTAMSPLQYQKWL 256 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL++A+ +++++ + A+ AA +VGYES SQFSRE+ R FG+ P D +R Sbjct: 257 RLNEAKRLMLNEHLDAATAAFKVGYESPSQFSREYGRQFGMPPKRDIVELR 307 >UniRef50_D0LTL2 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTL2_HALO1 Length = 290 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/284 (33%), Positives = 143/284 (50%), Gaps = 19/284 (6%) Query: 31 DKVNKLKNKE--NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + +N N++ + GLL LL + P A +YEP + ++ G K + ++ Sbjct: 14 ESLNPGANRQIARPIGGLL----LLKQDAPSAFEATVYEPVMCLILRGRKQVSVGQQTLS 69 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGE----DEHFQPSM 144 + + E LL++ LP S+ P L L VD+ L+ L + E DE Sbjct: 70 FGSGECLLVSHDLPVNSRI---SKAPYLALVLPVDLAILRRLYEQVEEAALDDER----- 121 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 A + +L A R L + + P DA++LG I E+ Y +L P GG L +L+ Sbjct: 122 -ARATETHRADPALLDALCRYLALADSPSDAKVLGPLIATELHYRLLMAPFGGMLRSLLR 180 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 ++ S I+R + I L+V +LA MS S+FH +FK++TST+PLQY K RL Sbjct: 181 HDSNASAITRAIAHIRGDLCAPLAVPELARRVGMSPSSFHKHFKAITSTTPLQYQKELRL 240 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 +AR ++ G +AAA VGYES SQFSRE+ R FG P D Sbjct: 241 LEARRLLSTGGASVTAAAYDVGYESPSQFSREYARKFGAPPSRD 284 >UniRef50_Q021L8 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021L8_SOLUE Length = 316 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%) Query: 43 LSGLLPDVRLL---YGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTV 99 + ++P V L+ + P T P + ++ G K E Y A +YLL ++ Sbjct: 32 FTAVIPGVHLMRFGWRSQPLVATQF---PCMAMVIQGTKSVEFGETNLEYGAGQYLLTSI 88 Query: 100 PLPFECETYATSEV-PLAGLRLNVDILQLQELL--MDIGEDEHFQPSMAASGINSATLSE 156 +P S+ PL + + +D +L+E++ D + QP GI Sbjct: 89 DVPATSRIVNASKARPLLAVGVQIDFAELKEVIRRCDAMPQLNTQP-----GITIFDADL 143 Query: 157 EILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVL 216 EIL A RLL +++ P ++ L I +EILY +L+G G LL + + + I+ V Sbjct: 144 EILDAVVRLLRLLDTPEHSKPLAPLIRQEILYRLLSGRSGSRLLEICRSGSPSNRIAEVT 203 Query: 217 KRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM 276 I+ + E+ VE LA MS S+FH +FK+VT +P+QY + RL +AR ++ + + Sbjct: 204 GWIKKHFAESFLVEGLAHHVGMSPSSFHQHFKAVTGMTPIQYQRRIRLQEARKSLLMEAI 263 Query: 277 KASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 A++RVGYES SQFS+++++YFG P +D A Sbjct: 264 NIGEASVRVGYESHSQFSKDYRQYFGRLPKDDIA 297 >UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPQ1_9DELT Length = 313 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 2/265 (0%) Query: 52 LLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATS 111 L+ E P A P + ++ G K I + F + ++L+ + +P + T+ Sbjct: 39 LVRREDPPAPDRCFERPLVSVIVQGSKRSLIGSQEFVFRRGQFLVSGIDMPSSSSFFDTA 98 Query: 112 E-VPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 P L +D L +L++ + P G+ A E L A RL ++++ Sbjct: 99 PGQPFLSLFFYLDRQILTDLMLRM-RPAGKAPQEDGPGVAVADAEPEFLEAVLRLAELLD 157 Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 +P I I++E+ Y +L GP G L L ++ + S + + + + + +E Sbjct: 158 KPEQIAIRAPMILQELHYLLLIGPLGHVLRGLYAQGSQNSQVLQAVSILRRDLGAPVRME 217 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 LA + MS+S H +FK+VT SPLQYLK RLH+A+ +++ + M+A++AA+ VGYES Sbjct: 218 SLARQVGMSLSTLHRHFKTVTGLSPLQYLKQLRLHEAQRLMLMEDMRAASAALSVGYESV 277 Query: 291 SQFSREFKRYFGVTPGEDAARMRAM 315 +QFSRE+KR FG P D R R + Sbjct: 278 TQFSREYKRMFGEPPHRDIQRKRTL 302 >UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEQ8_TRIAD Length = 240 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/239 (32%), Positives = 130/239 (54%), Gaps = 5/239 (2%) Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMDI 134 G K+ ++ V+ Y A + + +PLP + E SE P L +++++L E+++ I Sbjct: 2 GEKVCHVGSEVYTYSAGNFFINFLPLPVQTEVVEASEQEPFLSAALGINLVRLAEIILQI 61 Query: 135 G--EDEHFQ-PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 E++ Q S S + +++ A RLL V +A ILG II EI + +L Sbjct: 62 ERIENQEIQNSSFDTSCVVVGDADADLVDAFNRLLKVSRSEAEAAILGGAIIDEIYFRIL 121 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 T G AL L+++ H +S+ + I +++ VE+LA +NMS + F + FK + Sbjct: 122 TSEHGFALRELLNQYGHIQPVSKAVNYIHANLDKSIQVEELANLSNMSKTTFFNAFKRLM 181 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 P QY+K +L +A+ + + GM+A+ A+ VGY S SQFSRE+KR+FG +P + A Sbjct: 182 HLPPNQYIKGIKLQRAQAL-LKQGMQANEASYHVGYSSFSQFSREYKRFFGFSPSQTLA 239 >UniRef50_Q2S734 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S734_HAHCH Length = 304 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/269 (29%), Positives = 144/269 (53%), Gaps = 5/269 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P + + +P +++P + I+ G K E++F+YDA YL+++V LP + Sbjct: 29 IPRLSFIRSSSPTEPVLAVHQPAVCIVAQGAKKVISGEQLFKYDAAHYLVVSVDLPIAGQ 88 Query: 107 TY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 A+ E P +RL++D+ L EL++D G ++ P + + + ++ +L A RL Sbjct: 89 VMQASPEQPYLCVRLDLDLTILSELILDEGSVDNSAPHQS---VGVSLVTPRLLEAVIRL 145 Query: 166 LDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYT 224 + ++ + P D +L +EILY++ G GG L + + + IS+ ++ I+ + Sbjct: 146 VALLNDNPKDIAVLAPLAEKEILYWLANGDQGGILREITNGDSRIRQISKAIQHIKTTFD 205 Query: 225 ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMR 284 + +++L MS S+F H+F++ T +PLQY K RL +AR + Sbjct: 206 QPFDMDELLKLTCMSASSFFHHFRTATHMTPLQYQKQLRLLEARRRLFLGEQDICNIGYG 265 Query: 285 VGYESASQFSREFKRYFGVTPGEDAARMR 313 VGY+S SQFSRE+ R FG+ P +D AR++ Sbjct: 266 VGYDSPSQFSREYARLFGLPPSKDLARIK 294 >UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=B8JHL7_ANAD2 Length = 311 Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 86/297 (28%), Positives = 152/297 (51%), Gaps = 6/297 (2%) Query: 19 DMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 D R + R + ++++ ++ LL E P EP ++++ G K Sbjct: 11 DAIRAALARTIGRWTEGVEDRSTPIADLL----FFRREGPTPPGICRVEPSVVLVVQGKK 66 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGED 137 + + YD + +L+ ++ +P + A+ + P GL L +D+ L EL+ + Sbjct: 67 RMLAGDDAYAYDRDHFLIASLDVPASSQVLEASPKRPCLGLTLKLDLRLLAELVPQVHLA 126 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 + S AA G+ ++ +L A RL D+++ P +L + RE+ Y +LT G Sbjct: 127 AREERS-AAKGMALGAVTPPLLDAFMRLTDLLDEPDAIDVLAPLVRRELHYRLLTSDQAG 185 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 L + S + I+R ++ ++ Y L + +LAA +MS S+ H +F+ +T+ SPLQ Sbjct: 186 RLRQIASVGSQSHAIARAIEWLKVNYAAPLRIAELAARVHMSPSSLHQHFRQLTAMSPLQ 245 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 Y K RL++AR +++++G A+ AA +VGYES SQFSRE+ R FG P +R+ Sbjct: 246 YQKWLRLNEARRVMLNEGFDAAGAAFKVGYESPSQFSREYARLFGAPPRRHVVSLRS 302 >UniRef50_A6LZC1 AraC-type transcriptional regulator domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZC1_CLOB8 Length = 318 Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/251 (31%), Positives = 138/251 (54%), Gaps = 8/251 (3%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDI 124 Y P + I+ G + I ++ D ++ L+ + LP +T AT PL +R+++D Sbjct: 64 YLPSLSIVAQGARSISIGHETYKLDKSQMLMNPITLPISLQTMKATKSEPLLIIRVDLDP 123 Query: 125 LQLQELLMDIGEDEHFQPSM---AASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 ++ E++ + H P + A + +A +S I+ A RLL+ +++P D + Sbjct: 124 ERIAEIVPKVYS--HGLPEIKQWCAGHVMNADIS--IIDAMIRLLECLQKPGDVEFIAPL 179 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 I+ EIL +L GP G + A+ + + +S + + +++ + V LA +MSVS Sbjct: 180 IMEEILIRLLRGPAGIYVAAMGFADSEVNQVSEAIAWLRKNFSQAVKVSDLAKLTHMSVS 239 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 +F+++FK+VTS SP+QY K RLH+AR +++ M A+ A VGY S SQFSR++ ++ Sbjct: 240 SFYNHFKAVTSMSPMQYQKALRLHEARNLMLSQHMDATTACRMVGYVSNSQFSRDYSAFY 299 Query: 302 GVTPGEDAARM 312 G P +D R+ Sbjct: 300 GAPPRKDIGRL 310 >UniRef50_UPI000197C8CE AraC family transcription regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C8CE Length = 299 Score = 127 bits (319), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 81/250 (32%), Positives = 131/250 (52%), Gaps = 9/250 (3%) Query: 68 PGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDILQ 126 P + ++ G K F Y E ++++ +P E T A++ P L L +DI Sbjct: 48 PLVAMMLQGRKRVTTGSNSFEYGPGEAMVISADIPIEGLITKASAGEPYYSLVLELDISL 107 Query: 127 LQELL--MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 L ELL M I + +AS I+ + + A RL+ + E ILGK +IR Sbjct: 108 LSELLSAMKIKRNR------SASNIHIEPIRTNVADTACRLVRLFEEHEALNILGKGLIR 161 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 E+ Y++L G A+ AL + +H +SR ++++ N + + +++LA+ MSV FH Sbjct: 162 ELHYWLLRSEHGEAIRALGAMDSHSVKVSRAIEKLRNDFMYPIKIKELASSVGMSVPVFH 221 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 F+ +T+ +PLQ+ K RL AR ++ +G+ + AA VGY S SQF+RE+ R F ++ Sbjct: 222 KYFRLLTTLTPLQFQKQLRLIHARNQMLTNGVSITHAASAVGYNSVSQFTREYSRMFNIS 281 Query: 305 PGEDAARMRA 314 PG D RA Sbjct: 282 PGRDNKLFRA 291 >UniRef50_A7GXA4 Transcriptional regulator, AraC family n=2 Tax=Campylobacteraceae RepID=A7GXA4_CAMC5 Length = 300 Score = 127 bits (318), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 138/254 (54%), Gaps = 6/254 (2%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVD 123 +YEP ++ G K + ++ YD N YLL + +P T A+ + P L L Sbjct: 48 LYEPSFCVILQGAKAVGFGKNMYGYDENTYLLASTYMPLNVRVTKASKDEPYVSLALKFS 107 Query: 124 ILQLQELLMDIG-EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL-DARILGKQ 181 + ++ E+L +I + ++ Q S G+ LS+E+L RL+ + ++P + + Sbjct: 108 LDEIYEVLKNIEIQKQNLQKS--EKGVFFGELSDELLEPILRLVWLNDKPKSNIDYIAGL 165 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFS-LISRVLKRIENKYTENLSVEQLAAEANMSV 240 I +EIL+ + G L + Q S ISR + +I++ + E ++++ LA +MS Sbjct: 166 IKKEILFALANDKKSGYFLNKFAMQGSASNKISRAIIKIKDNFNEKINIKDLARACDMSE 225 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 S+ + NFK++TS SP+ + K RL +A+ ++ + + + AA VGYESASQFSRE+ R Sbjct: 226 SSLYQNFKTITSLSPIAFQKKIRLEEAKNLLSNTDLPVAQAAFEVGYESASQFSREYSRM 285 Query: 301 FGVTPGEDAARMRA 314 FGV P +A ++A Sbjct: 286 FGVAPKVHSAMLKA 299 >UniRef50_D0DBP1 AraC-type transcriptional regulator domain protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBP1_9RHOB Length = 326 Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 11/285 (3%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLY-GETPFARTPVMYEPGIIILFSGHKIGYINE 84 CR AD ++ + + L VR L+ GE A + +P I +L G K Sbjct: 43 CRRFADANSRPDGSAPTPARGLTVVRALHPGELMVA----VQKPVIAMLLQGRKRVTTLG 98 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 F Y E +++ +P T A+ P L L +D L+ L + P Sbjct: 99 ASFEYAPGEAMVIAADIPTVSRITRASIAAPYYALVLELDPAILRALRPAVSVRSGKAPP 158 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + I++ E++ AA RL +++RP +L ++RE+ Y++L G G A+ AL Sbjct: 159 VRVEPIDA-----EVIDAALRLARLLDRPEALSVLADGLLRELHYWLLMGVHGPAIAALG 213 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 +H I+R + + +Y + VE+LA A MS AFH +F+++T+ SPLQ+ K R Sbjct: 214 VPDSHAGRIARAVDILRREYARPIRVEELAEAAAMSEPAFHKHFRAITTLSPLQFQKQLR 273 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 L +AR +++ +G K + AA VGY S +QF+RE+ R F PG+D Sbjct: 274 LIEARRLMLAEGAKIAQAAHTVGYASVTQFTREYGRLFDAPPGKD 318 >UniRef50_A9HXN5 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria RepID=A9HXN5_BORPD Length = 306 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 5/268 (1%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 +P V +L P + +P + ++ G+K + ER + + A E LL++ +P + Sbjct: 29 VPGVVVLRETAPSLLQYAISKPLVALVLQGNKRVSMGERSYDFGAGESLLISTDVPTVSQ 88 Query: 107 -TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 T A+ +P L + +D + L +IG P + E+ A RL Sbjct: 89 ITRASQAMPYYSLVVELDTALIAGLAGEIGA----VPLAVQEPVRVEPTEAEVADTALRL 144 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 L +++RP +LG ++RE+ +++LTG GGA+ AL +H I R + + KY + Sbjct: 145 LRLLDRPRHLAVLGPALLRELHFWLLTGRHGGAIRALGVMGSHAQRIGRAVAILREKYAQ 204 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 + +E LA A MSVSAFH +F+ +TS +PLQ+ K RL +AR ++++G+ S AA V Sbjct: 205 PVRIETLADAAGMSVSAFHVHFRRITSLTPLQFQKQLRLIEARRRMLYEGVSISRAADAV 264 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMR 313 GYES QF+RE+ R FG+ P ++R Sbjct: 265 GYESVPQFTREYARLFGLPPARSIRQVR 292 >UniRef50_A9G5E9 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G5E9_SORC5 Length = 288 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/263 (31%), Positives = 134/263 (50%), Gaps = 7/263 (2%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 L ++ +L P + +YEP + ++ G K + F E LL++ LP Sbjct: 28 LKNIGILRHHQPTSFEAAVYEPVMGLVLQGRKETVLGADSFPMGVGECLLISHDLPVIAR 87 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS-GINSATLSEEILCAAERL 165 ++ P L +V++ L++L + + PS A + T ++ A R Sbjct: 88 V---TKAPYLVLLFDVELDTLRDLYEAMADS---LPSAAPPRSLAVHTCDARLVDALHRY 141 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 L + DA +LG + REI Y + T P GG L L+ +H S I+R + ++ + Sbjct: 142 LALAGSRTDAAVLGPLVSREIHYRLATAPFGGMLRDLIRHDSHASAIARAIAQLRRDFRS 201 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 + + +LA MS S+FH +FK++T++SPLQY K +L +AR ++ + SAAA V Sbjct: 202 PVEIPKLARSVGMSPSSFHKHFKAITASSPLQYRKGLQLLEARRLLRAGTISVSAAAFDV 261 Query: 286 GYESASQFSREFKRYFGVTPGED 308 GYESA+QFSR++ R FG +P D Sbjct: 262 GYESAAQFSRDYTRKFGASPKHD 284 >UniRef50_B4Y346 Putative AraC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y346_9BURK Length = 324 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 7/285 (2%) Query: 36 LKNKENSLSGLLPD----VRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDA 91 L ++ G P ++L+ P V Y P + ++ G K ++N ++ Y + Sbjct: 4 LFDRHAPADGFFPSPVAGLQLIRASAPTDPLSVFYRPALCLVLGGRKRVFLNNQITEYGS 63 Query: 92 NEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMDIG--EDEHFQPSMAASG 148 + +L+++ LP + S + P + L + ++ ++++ G ++ + AA G Sbjct: 64 DGHLVISQDLPALGQVVEASPLEPYLCVHLRFEQAEINRIVLEHGPPQEPEGASTRAARG 123 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 + S +L A RL+ +++ P D L I R I++ +L+ G L Sbjct: 124 LYVEPSSAALLDAILRLVRLLDAPADQPTLEPLIRRGIVHRLLSSANGWRLARTARTGCC 183 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 I+R L+ + ++ E + V +LA A++S+ A + NFK+VTS +PLQY+K RL +AR Sbjct: 184 DHRIARGLEVLRARFRETIGVRELADIAHLSLPAMNLNFKAVTSFTPLQYVKQLRLQEAR 243 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +++ M A+A AM +GY+S S+FSRE+ R FG P D AR+R Sbjct: 244 RLVVSTEMDAAAVAMTIGYDSPSEFSREYARMFGEPPSRDRARLR 288 >UniRef50_B1KC45 Transcriptional regulator, AraC family n=17 Tax=Bacteria RepID=B1KC45_BURCC Length = 373 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 82/244 (33%), Positives = 124/244 (50%), Gaps = 4/244 (1%) Query: 72 ILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQEL 130 ++ G K + + + D + L+ T LP T A P +L +D ++ L Sbjct: 121 LVGQGAKSMRVGDATYGIDESRMLVATADLPVTGRVTRADPAEPFLYAQLELDPRRIAAL 180 Query: 131 LMDIGEDEHFQPSMAASG-INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 + H P G +++ + EI+ A RL+ ++ +P D +L I+ EIL Sbjct: 181 TPVVFP--HGLPKAVDYGALDTLDATPEIVDAVARLMQLIAQPDDLDLLAPLIVDEILIR 238 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 +L GP G + + + ISR + I + Y + ++V+ LA + MS S FHH+F++ Sbjct: 239 LLRGPSGARVAQIGDAGSTTQRISRAVAWIRDHYLDPMAVDALARQVEMSPSTFHHHFRA 298 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 VTS SPLQ K RL +AR ++ M A A VGY SASQFSRE+ R FG PG D Sbjct: 299 VTSMSPLQCQKVLRLQEARRLMCLSAMDARQACRSVGYVSASQFSREYARLFGDAPGRDV 358 Query: 310 ARMR 313 AR+R Sbjct: 359 ARLR 362 >UniRef50_A3QEE9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica PV-4 RepID=A3QEE9_SHELP Length = 299 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 6/288 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LAD +E +PD+ L TP +Y + ++ G K I++R+ Sbjct: 13 LADTAFAYGRREGDHDTSIPDLTLHIRNTPTEPLHCIYTLSLSLILQGSKQVAIDDRLRI 72 Query: 89 YDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS--MA 145 A + +L T LP T AT P GL L +D + + ++ + +PS + Sbjct: 73 CSAGQSMLTTFDLPVISHVTEATRYHPFIGLVLKLDYGLIAQTCTELNLE---RPSKDLR 129 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 I++ + + A RLL + P L + +EI+ +L G G L L S Sbjct: 130 YQAISTQDIDTGLCDAMSRLLGLHLTPEYIESLAQLYKKEIVIRLLHGSHGMHLRHLASV 189 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + I +++ ++ + + + + +LA +A+MS SAF +FK++T +SPLQYLK+ RL Sbjct: 190 GSPSRQIVQIVAWMKQNFAQAIGINELADKAHMSASAFRQHFKALTGSSPLQYLKHLRLQ 249 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +AR ++ +G+ AS A+ VGYES SQFSRE+ R FG+ P +D R+R Sbjct: 250 EARDQMLLNGLDASQASGVVGYESPSQFSREYSRLFGLPPQKDIQRLR 297 >UniRef50_Q2NVE4 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVE4_SODGM Length = 235 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 2/206 (0%) Query: 16 KLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFS 75 K+RD I R +A ++ L E LL ++ + E P RTPV+Y+P I+I+ Sbjct: 9 KMRDAI-ASIPRQMALLLDTLARAEGYTRSLLEGIQFMRAEHPLERTPVLYDPCIVIVCQ 67 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG 135 G K GY+ E+ + YD + YL+L+VPL F ET A+ + PL + + +++ L EL+M + Sbjct: 68 GRKRGYLAEKGYCYDQHHYLVLSVPLQFLTETEASPQYPLLAVAIALNMAVLSELVMWL- 126 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + + A GI L I RLL + +ARILG Q++RE+ Y VL G Sbjct: 127 DRPGTRACDAPEGIIYTPLDAAIADTTLRLLQALASKEEARILGPQVVRELYYRVLVGER 186 Query: 196 GGALLALVSRQTHFSLISRVLKRIEN 221 G AL A ++ Q HF+ ISR L+RI Sbjct: 187 GNALRAALANQGHFAHISRSLERIHR 212 >UniRef50_A9D252 Transcriptional regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D252_9RHIZ Length = 296 Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 138/298 (46%), Gaps = 24/298 (8%) Query: 25 ICRLLADKVNKLKNKENSLSGLL----PDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 I + L +V+ L ++ G L LL E P + P +Y P I ++ G K Sbjct: 2 IRKALVTRVSSLLDQSGLREGALFHEDSGTHLLRHEAPTGQNPTVYRPLICLILQGAKEV 61 Query: 81 YINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 N+R A + L+++ LP T A ++P L +D+ L+ L Sbjct: 62 GTNKRTITVRAGQSLIVSHALPVVSRITEAAPDLPYVALVFPLDLDLLRSL--------- 112 Query: 140 FQPSMAASGINSAT---------LSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 P++ S ++ A+ EEI A R + R+L REI + Sbjct: 113 -APAVLPSSVSRASEPFSIHLCDTDEEIEDALWRYFSQCDTDATRRLLAPITAREIHARL 171 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L GP G L L+ ++ S I + + I+ ++V++LA + MS SAF FK+V Sbjct: 172 LMGPHGETLHKLLWHESTASRIFQATRDIQTHLARAIAVKELARDVGMSSSAFFEQFKAV 231 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 T TSPLQY K+ RL +AR + K S A VGYES++QFSRE+ R FG +P D Sbjct: 232 TGTSPLQYQKDLRLLRAREALQTSSAKVSEIAFGVGYESSAQFSREYSRKFGRSPRHD 289 >UniRef50_Q6FB96 Putative transcription regulator (AraC family) n=2 Tax=Acinetobacter sp. ADP1 RepID=Q6FB96_ACIAD Length = 299 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 4/245 (1%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVD 123 +Y+ G+ ++ G K I +F Y + +L T+ LP T + P G+ L +D Sbjct: 51 IYDLGLGVILQGEKQVLIGNEIFSYGCGQTMLTTIDLPAVSRLTQVSYSEPFLGMMLKLD 110 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 I + E+ G E+ + + + ++ A +RL+D++E P + I Sbjct: 111 IGMITEI---AGSMENINVTSNIPSFSIEQMDLGLIEALDRLVDLVEDPSLISQIAPLIQ 167 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 EI+ +L G G L L+ I +V+ + N + ++ V+++A +ANM+ + F Sbjct: 168 HEIIVRLLLGKHGDYLRNLIKISVSEKNIFKVISWLRNNFLNDVRVDEIAEQANMTSATF 227 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 ++F+ +T +PLQY K RL +AR +++ ++ A VGYES SQF+RE+ R FG+ Sbjct: 228 RNHFREITRMTPLQYQKQLRLQEARKLMLMQSIEIRRVAESVGYESQSQFTREYVRLFGI 287 Query: 304 TPGED 308 TP +D Sbjct: 288 TPQKD 292 >UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08YF3_STIAU Length = 336 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 23/307 (7%) Query: 19 DMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 D +E+ L + + + + ++P + L+ P M +P ++ G K Sbjct: 32 DADTQELLARLTAQFLRRTPSDGETTTIVPGLTLMRLSGPTVVQRGMLKPSFCVVAQGEK 91 Query: 79 IGYIN-ERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG- 135 IG + RY A ++L ++ +P + +A+ P + + +L D Sbjct: 92 IGQAGADTTIRYSAGQFLASSINMPVAGQVLHASKARPYLAAVFELCPADVLSVLADAKI 151 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL-------DARILGKQIIREILY 188 + + P A+ + +A RLLDV+ R + +AR + RE++Y Sbjct: 152 QVDATAPCCPATFVGTAD---------ARLLDVVLRSVSSLDDEREARFFAPLLRRELIY 202 Query: 189 YVLTGPCGGALL--ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 ++TGP A+ AL SR + R ++ I+ + + L +++LA NMS S+ HH Sbjct: 203 RLVTGPSAFAVAQSALQSRPDDG--VGRAVEWIKTHFAQPLVIDELAKHVNMSTSSLHHK 260 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK+ PLQY K RL +AR +++ A+ AA VGYES SQF RE++R FG +P Sbjct: 261 FKATVMMGPLQYQKRLRLEEARRLLLSGLADATRAAFDVGYESPSQFIREYRRLFGTSPM 320 Query: 307 EDAARMR 313 D RMR Sbjct: 321 RDVKRMR 327 >UniRef50_C6ARF6 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=C6ARF6_RHILS Length = 299 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/275 (30%), Positives = 129/275 (46%), Gaps = 5/275 (1%) Query: 41 NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 S L+P + + G+ + P +Y I + G K I + + YD+ +Y + + Sbjct: 19 GSTDTLIPRLDMFVGQDTMGKVPCLYRSMICFILQGSKRVAIGDTLLSYDSAQYFISALD 78 Query: 101 LPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGE-DEHFQPSMAASGINSATLSEEI 158 LP + A P + L ++ L EL + E Q M G+ + + Sbjct: 79 LPLTGQILDAGKGRPYVAVSLVLEPGLLAELAATMPSVRESDQKGM---GVAVNPMIAPL 135 Query: 159 LCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKR 218 RLL +++ P D IL I RE+LY +L GP G L + + + + R + Sbjct: 136 RDTLLRLLSLLDNPADIPILSPMIERELLYRLLQGPQGRLLRQIARPEGALARVRRAIAW 195 Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 I + L +E L + MS ++ H +F ++T SPLQY K RL +AR +++ G A Sbjct: 196 IRDHPDAQLRIEALCDASGMSRASLHRHFLAITGFSPLQYQKQLRLQEARQLLLAGGHSA 255 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 S AA VGYESASQFSRE+ R FG P MR Sbjct: 256 SDAAFAVGYESASQFSREYLRQFGAPPARHVQEMR 290 >UniRef50_A9FZJ5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZJ5_SORC5 Length = 302 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/254 (33%), Positives = 132/254 (51%), Gaps = 8/254 (3%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDI 124 + I+ G K + +VFR Y++ + LP S PL GL+++ D Sbjct: 45 WRASFCIVVQGTKEILLERQVFREREPHYIVSPIDLPVTSRVMGVSPAQPLLGLKMDFDA 104 Query: 125 LQLQELL--MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQI 182 L+E+ +D E + A I A S+ +L AA RL +++ P DA +L + Sbjct: 105 ALLREVAAQLDRARPEGLENPGRAIFIGKA--SDRMLDAAVRLGELLATPDDAAVLAPLV 162 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 +E+ +++L GP G A+ +V + I+ + ++ E++ + LA A MS +A Sbjct: 163 RKELTFHLLKGPDGPAIRQIVRAGSLAHRIAEAVYHLQASLDEDVDIAALARAAGMSRAA 222 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 F FK T+ SPLQY K RL +AR +++ +G A +A RVGY SASQFSRE+ R FG Sbjct: 223 FFKRFKEATAMSPLQYQKRLRLLEARRLMVEEGAGAEVSAFRVGYTSASQFSREYSRMFG 282 Query: 303 VTPGEDAARMRAMQ 316 +P DA RA+Q Sbjct: 283 NSPLRDA---RALQ 293 >UniRef50_C7DDR7 Transcriptional regulator, AraC family n=2 Tax=Rhodobacterales RepID=C7DDR7_9RHOB Length = 217 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 112/199 (56%), Gaps = 2/199 (1%) Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 T A+ P L L +D+ ++ L + + + P + ++ + L R Sbjct: 13 TKASVGEPYIALILALDLGVVRSLCNQVADAD--LPEASPQTLSVWQADPKWLGPLTRYA 70 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 ++ +D ++LG I+REI Y +L P GG L +++ +H + I++ ++ + N++ + Sbjct: 71 ELTGNTMDTQVLGPSILREIHYRLLLSPIGGMLRRMMTADSHANRIAKAIQMLRNEFRTS 130 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +S+ +LA A MS S+FH +FK+ TST+PLQY K++ L AR +++ DG + A VG Sbjct: 131 ISMAELADWAGMSTSSFHTHFKAFTSTTPLQYQKDFCLIAARTLLVQDGRSVTDTAYAVG 190 Query: 287 YESASQFSREFKRYFGVTP 305 YES + FSR++ + FG+ P Sbjct: 191 YESPTHFSRDYSKKFGLPP 209 >UniRef50_Q82GC0 Putative AraC-family transcriptional regulator n=1 Tax=Streptomyces avermitilis RepID=Q82GC0_STRAW Length = 308 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/253 (31%), Positives = 127/253 (50%), Gaps = 5/253 (1%) Query: 64 VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVD 123 ++Y P I + G K +R + + L ++ LP C T+ + P L++D Sbjct: 49 LLYAPMICFIADGAKRTLAGDRSWVTGRGDMFLNSLVLPVTC-TF--EQAPYRSAVLHLD 105 Query: 124 I-LQLQELLMDIGEDEHFQPSMAASGIN-SATLSEEILCAAERLLDVMERPLDARILGKQ 181 L LL G D P A G +A+++ +L A R + +++ P D R L + Sbjct: 106 GRLLADLLLELDGTDPLPLPRPGAPGAQVTASMTPALLDAVTRWVRLLDTPDDIRPLASR 165 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 I EILY +L GP G L + + + I Y E LS+ +AA A+MS + Sbjct: 166 IEAEILYRLLAGPLGPILRQYTLADSGAARVRVAAAYISTHYAEPLSIATIAATAHMSPA 225 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 H +FK+ T SPL++ K RL +AR ++ A+ A VGY SA+QF+RE++R + Sbjct: 226 TLHRHFKAATGMSPLRFQKLLRLQEARRQLVAGNTTAAVVAEAVGYASATQFNREYRRTY 285 Query: 302 GVTPGEDAARMRA 314 G+ PG+DA+ +R Sbjct: 286 GLPPGQDASLLRG 298 >UniRef50_C0A3K5 AraC family transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3K5_9BACT Length = 292 Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/274 (32%), Positives = 141/274 (51%), Gaps = 7/274 (2%) Query: 41 NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 S++ +P + LL + + V Y P +L SG K ++ + F Y +YL+ + Sbjct: 15 ESVTSPIPKLTLLRSDVVNEPSAVSYAPLFCMLASGRKRVWLGRQEFVYGPRDYLITSAE 74 Query: 101 LPFECETYATSEVPLAGLRLNVDILQLQELLMDIGE-DEHFQPSMAASGINSATLSEEIL 159 LP + E P G +D + E+L+ + + D PS A + A +E+ Sbjct: 75 LPLVAQVI---EAPYLGFAFALDPEVIAEILLKLPKADPGRVPSKA---VAVARAEDELF 128 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI 219 A RLL +++RPL I+ I REIL+++L GP + L + + S + R + I Sbjct: 129 DAVGRLLRLLDRPLHIPIMAPMIEREILFHLLQGPHADTIRQLGAPASPLSQVRRGIDWI 188 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 Y E + V + A A MS FH +F++VT+ SPLQ+ K RL +AR ++ + A+ Sbjct: 189 REHYNETMRVGRAAKAAGMSAPTFHRHFRAVTNLSPLQFQKRLRLEEARRRLLAERADAA 248 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + A VGYES SQFSRE++R FG P DA+ R Sbjct: 249 SIAFDVGYESPSQFSREYRRMFGAPPRRDASEAR 282 >UniRef50_A7JPV4 AraC family transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JPV4_PASHA Length = 283 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/243 (32%), Positives = 126/243 (51%), Gaps = 11/243 (4%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDIL 125 +P + ++ G + N + E + V LP +T + +E P + L +D Sbjct: 45 DPSLCVVLLGERQICTNGHCQVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLDFD 104 Query: 126 QLQELLMDIGEDEHFQPSMAASGINSAT---LSEEILCAAERLLDVMERPLDARILGKQI 182 + +++ + P + IN T L EI RLL+++ P L I Sbjct: 105 LIAKIITQL------PPQKISENINQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLI 158 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 + E+ +Y+L GG + +L+S+ + + I+ K +E K+ + L++ LA E MSV+ Sbjct: 159 LNELYFYLLQSEQGGYIRSLLSQDGNIAKIANATKILERKFADTLNMSALAEEVGMSVAG 218 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 F+ +FKSVTS +PLQY K+ RL+ AR + G+ S A +VGYES SQFSRE+KR FG Sbjct: 219 FYAHFKSVTSMTPLQYQKSLRLNAAREK-LQAGVSVSETAYQVGYESPSQFSREYKRQFG 277 Query: 303 VTP 305 +P Sbjct: 278 ESP 280 >UniRef50_Q1J2Q3 Transcriptional regulator, AraC family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2Q3_DEIGD Length = 365 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 130/250 (52%), Gaps = 4/250 (1%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDIL 125 +P + I+ G+K I + Y+ + L+ V LP T A+ P +R+++D Sbjct: 57 QPALCIVAQGNKSVQIGAEQYTYNPDRMLVYAVNLPTAFWVTEASPSAPFLTVRVDLDPQ 116 Query: 126 QLQELLMDIGEDEHFQPSMAAS-GINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 + EL + + H P + S G+ I+ AA +L+ E DAR +G I+ Sbjct: 117 FIAELALKL--YPHGLPRLQDSRGVQMTAADPAIIHAAVHILETAENERDARWVGPIILD 174 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 E+L +L P G + L + ++R ++ I+ + L+++ LA A++ VS F+ Sbjct: 175 ELLMCLLLSPVGPVVAQLGRVDSGAQRVARAIEWIQGHLDKPLNIKLLAERAHLGVSTFY 234 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 +FK+V + SPLQ+ KN RL +AR ++ + A + +VGY SASQFSR++ R FG T Sbjct: 235 AHFKAVATMSPLQFQKNLRLQEARRLLPSTSLDVGAISRQVGYASASQFSRDYSRLFGRT 294 Query: 305 PGEDAARMRA 314 P + + RA Sbjct: 295 PRTEMTQGRA 304 >UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKP8_9FIRM Length = 299 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 4/294 (1%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 E R + + KL KE +P V + E R P + P + I+ G + Sbjct: 2 ETAIRTMQKDIRKLSLKEGENQTGIPGVTVYCFEEEKIRMPSVDNPYLYIVLDGMLRLHT 61 Query: 83 NERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 + Y A +Y + + P SE L ++V+ + +G D Sbjct: 62 PSGIMDYMAGQYSVSRIDTPLMGTVLKFSE-QRDFLAMSVEFTVNDVITTVLGLDNDLTE 120 Query: 143 SMAASGI--NSATLSEE-ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + + N LS+E ++ + ++L + R + + + K I+RE++Y VL G CG Sbjct: 121 KIMKEQLDRNRMALSDEAVIESVDKLFSGIYRAVPSEFMRKNILREMIYAVLCGSCGRQF 180 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + V I I+ + ++ +VE LA + NMSVS FH F+S PLQ Sbjct: 181 IQSVVNTRPAEEIYEANSWIKENFRDSFTVESLAEQRNMSVSLFHQKFRSAVGMGPLQCQ 240 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K RL +AR +++ + + A++ VGYES SQF R++++ FG P ED M+ Sbjct: 241 KRLRLTEARRLMLDERKNVTEASVEVGYESVSQFIRDYRKMFGSAPKEDILNMK 294 >UniRef50_B9JLS7 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLS7_AGRRK Length = 292 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 7/249 (2%) Query: 62 TPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRL 120 TP ++EP + G K+ + F + + + LP+ + T A P G+ L Sbjct: 47 TPAVFEPMFYAVLRGTKVLIMGANRFELVTGDCAVSSFGLPYSHQLTGAKPNFPYVGVSL 106 Query: 121 NVDILQLQELLMDIGE-DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 ++D L ++ DI + ++ + ++AA G++ + A RL++++ P D L Sbjct: 107 HLDADILTRVMFDIPKREDRWTCAVAAGGLDG-----PVGDAFARLVELVNAPDDIGALA 161 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 E+ Y +L G L + R F + + + ++E +++ LAA ++MS Sbjct: 162 PHYEFELYYRLLQSSMGDTLRQVSQRNGRFQQLKSAADWLASNHSEPVNIPALAAASHMS 221 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 V++FH +FK VT SPL + ++ RL +AR ++ S A VGY+S SQFSRE+K Sbjct: 222 VTSFHRHFKEVTGFSPLAFQRHIRLLEARKLLASGSTNVSRVAYEVGYKSPSQFSREYKS 281 Query: 300 YFGVTPGED 308 FG P D Sbjct: 282 MFGSAPVAD 290 >UniRef50_B5J4U5 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=B5J4U5_9RHOB Length = 300 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 81/260 (31%), Positives = 123/260 (47%), Gaps = 2/260 (0%) Query: 52 LLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-AT 110 L+ +TP A +Y+P + ++ G K N++ A + L+++ LP A Sbjct: 39 LVRQDTPTAVFSTVYKPMLCLILQGTKEIGSNDKSLTAHAGQSLIVSHILPVVSRIIEAG 98 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 E P L +D+ L+ L ++ Q S S I + + +R D E Sbjct: 99 PEQPYVALVFPLDLSLLRSLASEVVPSFSDQSSDPFS-ICLCDTDDALEGTMQRYFDQCE 157 Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 + + REI +L P L L+ ++ S + + + I++ + + V Sbjct: 158 TQQTRQFIAPITKREIHMRLLLSPHAQILRKLLWHESTASRVFQATENIQSNLADKIIVG 217 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 +LA A MS SAF FK+VT TSPLQY K+ RL +AR + K S A VGYES+ Sbjct: 218 ELAQSAGMSSSAFFERFKAVTGTSPLQYQKDLRLLRARGELQASNAKISDIAFGVGYESS 277 Query: 291 SQFSREFKRYFGVTPGEDAA 310 +QFSREF R FG TP +D A Sbjct: 278 AQFSREFSRKFGRTPRQDRA 297 >UniRef50_C5CNC1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CNC1_VARPS Length = 313 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 15/289 (5%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE------PGIIILFSGHKIGYI 82 L D V + + L P +R F+R PV YE PG++++ G K ++ Sbjct: 22 LRDMVAARTSADGRTDALYPGLRCYR----FSR-PVRYEKTQRLTPGVVVVLQGRKTAHL 76 Query: 83 --NERVFRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + R Y A + L+L + A+++ P + L++ L + + + E Sbjct: 77 GGDRRSLDYGATQCLVLGAEVACLGTVVGASADAPYLAIHLDLPPDVLVKSFVALAESGT 136 Query: 140 FQPSMAASGIN-SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 A N +A ++ E++ A RLL + P+D R L + EI+ +L A Sbjct: 137 LAAEPARVTENFTAPVALEVVEAFARLLQAADDPVDRRTLAPLAVEEIVLRLLRSEAAAA 196 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 + ++ + + I + + LSV ++A +MS S F H+F+ V +P++ Sbjct: 197 IRSVGAVTRAGARIQAAIAFMRRHLGRPLSVAEIAGHVHMSPSHFAHSFREVAGVTPMRC 256 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 +++ RL +AR++++ G++ AA +VG+ESA+ F+R F+R F TP E Sbjct: 257 IRDLRLEEARVLMLGAGLRPGDAAAKVGFESAAHFNRAFRRRFEATPAE 305 >UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B5740E Length = 299 Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDI 124 Y P + ++ +G K + + + + + + V LP AT E R +D Sbjct: 48 YTPSLSVVLAGRKRSVVGDDDQVWGLDRFFITPVDLPVLSGVVATDERYGFLSARWRLDP 107 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 + E+ + +PS + + T + + A RLL +++ P +LG Q R Sbjct: 108 ALVTEVATAMPRTRR-EPSGRLDRLGAWTPALADVFA--RLLGLLDEPEHIPLLGPQFAR 164 Query: 185 EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFH 244 E + +L +LA + H ++ R ++ + + E +++ LAAE + S + Sbjct: 165 ETVLRLLQTTQAPRVLAAI--DAHDPVVPRAVRLLTERIAEPWTLDALAAEVSASRATLS 222 Query: 245 HNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 FK TS +P+QYLK RL +AR ++ G A+ AA VGY SA F+R+++ +G + Sbjct: 223 RRFKQATSMTPMQYLKRLRLGEARHRMVVRGDSAARAATAVGYRSAPHFTRDYRLVYGTS 282 Query: 305 PGEDAARMR 313 P DAAR R Sbjct: 283 PAADAARAR 291 >UniRef50_B8Y3J6 AraC n=3 Tax=Actinobacillus pleuropneumoniae RepID=B8Y3J6_ACTPL Length = 140 Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/118 (39%), Positives = 68/118 (57%) Query: 154 LSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 L E +L ERL+D+++ P D L I ++I Y +L G L LV+ +H I+ Sbjct: 23 LEENLLAQFERLIDLLKTPEDIDFLAPLIQQQIYYVLLKSNQGQKLRELVNEGSHTQRIA 82 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + IE +E L VE LA +A MSVS FH + K +T+ SPLQY K++RL A+ +I Sbjct: 83 QTAFWIEQHLSEPLRVEDLAKQAGMSVSGFHSHLKKMTNMSPLQYQKSHRLLAAQRLI 140 >UniRef50_D1N3N0 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3N0_9BACT Length = 336 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 1/124 (0%) Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 + LTG C A L + + ISRV++++ ++Y+E SV ++A A MSVS F H F Sbjct: 191 HALTGICRKARLQGGRGEENSFRISRVVEQLNSRYSEEFSVPRMAKLAGMSVSNFRHRFS 250 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 V SP++YL RL A + + ++ A RVG+E ++ F+R+F++Y G+TP E Sbjct: 251 EVMGVSPVEYLTRLRLKMAAPLFMMP-ENITSIAFRVGFEDSNYFARQFRKYAGLTPTEF 309 Query: 309 AARM 312 R+ Sbjct: 310 RNRL 313 >UniRef50_C9KN89 Transcriptional regulator, AraC family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KN89_9FIRM Length = 286 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/106 (36%), Positives = 59/106 (55%) Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 L+ RV IE Y E LS+ +A E + S H FK T+ +PLQYL+ +R+ KA+ + Sbjct: 173 LMERVRSYIEQHYAEALSIRDIAQEFHASRDYIAHAFKHTTNYAPLQYLRRWRIGKAQTL 232 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 +I + + A RVG++ + FSR F++ G+ PG RA Q Sbjct: 233 LIDTDLSLTEVASRVGFDDPNYFSRVFRQVIGMPPGTFRRTWRAAQ 278 >UniRef50_Q2SGY3 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SGY3_HAHCH Length = 331 Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/96 (39%), Positives = 55/96 (57%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I+R L +Y E L+VEQ+A MS SAF FK P++YL ++R ++AR ++ Sbjct: 213 IARALNIFHRRYHEPLTVEQVAGAVGMSRSAFSVLFKRNLKQGPMEYLNSWRFYQARKIL 272 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 S ++ VGY S + FSR FKR + +TPGE Sbjct: 273 QQSHRPLSQVSLDVGYASEAAFSRAFKRRYDITPGE 308 >UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein n=2 Tax=Flavobacteriaceae RepID=Q1VVA7_9FLAO Length = 306 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 16/252 (6%) Query: 68 PGIIILFSGHKIGYI-NERVFRYDANEYLLLTVPLPFECETY-----ATSEVPLAGLRLN 121 P I + SG KI ++ N+ F + E +V LP + + AT + P + L Sbjct: 52 PIIASMISGRKIIHLKNKATFDFLPGE----SVVLPAKKKMIIDFPDATLDSPTRCMALG 107 Query: 122 VDILQLQELLMDIGEDEHFQPSMA-ASGINSATL----SEEILCAAERLLDVMERPLDAR 176 +D ++QE + + S S +N + L + ++ ERLL ++ Sbjct: 108 IDSQKIQETIDVYQNATEIEESFTLGSNLNLSPLHLNNNTQVQHLLERLLQTFSSGHKSK 167 Query: 177 -ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 L +I+E++ +L GALL S ++ VLK I Y ++++VE LA + Sbjct: 168 DALLDVMIKELILRLLQTNARGALLDENSYLFDNHRMAFVLKYIREYYKDDITVEDLADK 227 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 A MS S F+ +FK+ +P++YL + RL +A+ +I K S A G+ S+S F Sbjct: 228 ACMSKSHFYKSFKNTLGETPMEYLNSERLKQAKKLIRTTSSKLSEIAFSTGFNSSSYFVT 287 Query: 296 EFKRYFGVTPGE 307 +FK+ G+TP + Sbjct: 288 QFKKQEGMTPSQ 299 >UniRef50_B8ESK8 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=B8ESK8_METSB Length = 304 Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 5/131 (3%) Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 +RI+ +IR + +V G G L L + I+R LK I K + S+ LA Sbjct: 162 SRIIDLLVIRVLRSWVHKGQTSGWLGGLTDAR-----IARSLKAIHEKPMQRWSINALAD 216 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 MS S+F F ++ SPL+Y +RL AR M+ + +R+GYES + FS Sbjct: 217 LVGMSRSSFCERFTALVGRSPLRYQNEWRLALARDMLAKRDARVGEIGLRIGYESEAAFS 276 Query: 295 REFKRYFGVTP 305 R +K+ FG +P Sbjct: 277 RAYKKLFGHSP 287 >UniRef50_B9JLR2 Transcriptional regulator protein n=2 Tax=Rhizobiales RepID=B9JLR2_AGRRK Length = 328 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 7/133 (5%) Query: 175 ARILGKQIIREILYYVLTGPC--GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQL 232 +R++ +IR + +V T P G L AL + ISR LK I ++ +V +L Sbjct: 195 SRLIDVLVIRAMRIWVRTAPPEEKGWLAALADAR-----ISRALKAIHDEPFRRRTVAEL 249 Query: 233 AAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQ 292 AA A MS S F F ++ PL Y +RL A M+ + S A RVGY+S + Sbjct: 250 AAMAGMSRSNFAERFSTLVGAGPLHYQTRWRLLLASDMLRRSDARVSDVARRVGYDSEAA 309 Query: 293 FSREFKRYFGVTP 305 FSR FK FG+ P Sbjct: 310 FSRAFKAQFGIPP 322 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 58/105 (55%) Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 +S + L+ VL IE YTE +++ +LA A MS F H F +T +P+ Y+ Y Sbjct: 174 LSTHRNIYLLKNVLNYIEAHYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYY 233 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 R+ +A ++ G + AM G+ S F+R FK+Y G++PG+ Sbjct: 234 RVERACCLLAGIGHSITDIAMLCGFNDVSYFTRAFKKYKGISPGQ 278 >UniRef50_C0B5R1 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B5R1_9FIRM Length = 220 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 3/106 (2%) Query: 204 SRQTHFSLISRV---LKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 SR + L SR+ ++ IEN Y E +S+E+LAAEAN+S S FK T+P++YL Sbjct: 101 SRNKNLLLQSRLREMMQFIENHYKERISLERLAAEANISKSEALRCFKRGIGTTPVKYLI 160 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 +YRL +A+ ++ A VG ++ S F R FK+ +G+TPG Sbjct: 161 DYRLERAKELLCKTNDTVIRVAADVGIDNTSYFVRIFKKMYGMTPG 206 >UniRef50_UPI00019065BD helix-turn-helix domain-containing protein n=2 Tax=Rhizobium etli RepID=UPI00019065BD Length = 250 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 58/96 (60%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + +V+ ++ T+++S++QLA+EA MS F FK+ T SP+QY+ + RL +AR++ Sbjct: 151 LRKVIAYVQEHLTDDISLDQLASEAAMSRYHFARAFKAATGRSPIQYVIDERLDRARLLF 210 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + A RVGY S+F + F++ G+TP + Sbjct: 211 KTTSATVAEVAFRVGYADVSRFGQHFRKRVGITPAQ 246 >UniRef50_Q09DL8 Transcriptional regulator, AraC family protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09DL8_STIAU Length = 755 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 6/126 (4%) Query: 182 IIREILYYVLTGPC-GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 +++ I ++ G C L AL Q I + L I + E+ +VE LAA +S Sbjct: 605 LVQAIRTHIAAGGCQNHGLCALADPQ-----IGKALALIHERPAESWTVESLAAAVALSR 659 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 S F F S+ PL+YL +R+ KA ++ + S A GY S + F+R FKR+ Sbjct: 660 SGFAARFSSLVGDPPLEYLARWRMTKAAQLLRESNLSLSEVAAHAGYHSEASFNRAFKRW 719 Query: 301 FGVTPG 306 GV PG Sbjct: 720 EGVAPG 725 >UniRef50_Q0AK28 Transcriptional regulator, AraC family n=1 Tax=Maricaulis maris MCS10 RepID=Q0AK28_MARMM Length = 320 Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 10/140 (7%) Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 A IL Q+IR L + GP LA + H + R L I N S++ LA Sbjct: 186 ADILVIQLIRRWLEHA--GPGERGWLAAL----HEPGLGRALAAIHTDPAINWSLDSLAG 239 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A MS SAF F ++ T+P++Y+ +RL +AR ++ + + R GY S + FS Sbjct: 240 IAAMSRSAFCARFTTMLDTAPMKYVTRHRLARAREALVQTQDSLADISERYGYGSDAAFS 299 Query: 295 REFKRYFGVTPGEDAARMRA 314 R FK+Y+G+ PG R+RA Sbjct: 300 RAFKKYYGMAPG----RVRA 315 >UniRef50_Q0TS33 Transcriptional regulator, AraC family n=6 Tax=Clostridium perfringens RepID=Q0TS33_CLOP1 Length = 506 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 61/98 (62%) Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 S+ ++V+K I+N+Y+ LS++ +A + N + + + FK T ++ ++Y+ ++R++KA+ Sbjct: 403 SIANKVIKIIKNEYSSELSLDYIADKVNFTPTYLSYVFKKETGSNIVKYITDFRMNKAKE 462 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + MK GYE+ S F+R FK YFGVTP + Sbjct: 463 FLEEGNMKIVQVGKACGYENQSYFNRIFKNYFGVTPNQ 500 >UniRef50_A6UH43 Helix-turn-helix-domain containing protein AraC type n=7 Tax=Proteobacteria RepID=A6UH43_SINMW Length = 329 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/182 (31%), Positives = 79/182 (43%), Gaps = 18/182 (9%) Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG---------PCGGAL 199 IN+ T SE A +LD M R + A +G + L VL CG Sbjct: 149 INALTASEP---AIPHMLDAMAREVGASRVGSGGVLARLADVLAALIIRSWVEHGCGNTS 205 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 V+ H L RV+ + + +V+ LA S S F F SV +P +YL Sbjct: 206 -GWVAAVRHPGL-GRVIAAMHLDPEKAWTVDSLARLMGASRSGFAQQFASVVGETPARYL 263 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP----GEDAARMRAM 315 R+H+AR + D M+ S A R+GY+S + FSR FKR G P G D A + Sbjct: 264 AQVRMHQARQWLTRDRMRISVVARRLGYDSEASFSRAFKRVIGQPPSHYRGADPAEVSTF 323 Query: 316 QG 317 G Sbjct: 324 AG 325 >UniRef50_C6B325 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=C6B325_RHILS Length = 331 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 55/94 (58%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +SR L I + + S+EQLAA + MS SA F+++ STSP++Y++++RL+ A + + Sbjct: 229 LSRCLSLIHDDPRRDWSLEQLAAASGMSRSALAERFQAMLSTSPIRYIRDWRLYLASVAL 288 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 G +A A GY + + F+R F R F P Sbjct: 289 ATSGQPIAAIAYEAGYATEAAFNRAFSRAFATPP 322 >UniRef50_Q01Y24 Transcriptional regulator, AraC family n=2 Tax=Acidobacteria RepID=Q01Y24_SOLUE Length = 335 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 10/135 (7%) Query: 175 ARILGKQIIREILYYVLTGP--CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQL 232 A +L QI+R ++ +GP G L A+ + + L I + +VE L Sbjct: 191 AEVLFIQILRA---HIASGPERNKGWLRAIFDPK-----MGTALSAIHDSVKTPWTVESL 242 Query: 233 AAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQ 292 A A MS SAF FK + +PL+Y+ +R+ KA ++ K A VGYES + Sbjct: 243 AEAAGMSRSAFAARFKELLGQTPLEYVTEWRMQKAMQLLQQRDKKLIDVARSVGYESGAA 302 Query: 293 FSREFKRYFGVTPGE 307 FS+ FKR G+ PGE Sbjct: 303 FSKAFKRVVGINPGE 317 >UniRef50_A6VZ04 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZ04_MARMS Length = 328 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 8/149 (5%) Query: 165 LLDVMERPLDARILGKQIIREILYYVLTGPC-------GGALLALVSRQTHFSLISRVLK 217 +LDVM + L A+ G +I L V+ G + V L ++VL Sbjct: 171 ILDVMTKELKAKRPGYSVILTRLADVVAAAILRRWVEIGCNVCGWVEAMRDPKL-AQVLS 229 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 + ++ SV +A+E +S S F F +T ++P QYL N R+ A I D + Sbjct: 230 ALHHEPGRQWSVADMASEMGVSRSVFAERFTELTHSTPQQYLGNLRMRLASQWISQDNLS 289 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPG 306 A R+GY SA+ FSR FKR G++PG Sbjct: 290 LDEIADRLGYGSAASFSRAFKRMTGISPG 318 >UniRef50_C6AWA8 Transcriptional regulator, AraC family n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AWA8_RHILS Length = 348 Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%) Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 G L L RQ +++ L RI ++EQLA + MS S F FKSV PL Sbjct: 214 GWLAGLTHRQ-----LAQTLHRIHADLAHPWTLEQLARDVGMSRSTFAVLFKSVVGVPPL 268 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 Y+ +R+++A+ +I+ G SAAA + GY + SR FK GV PG+ Sbjct: 269 TYITTWRIYRAK-LILAAGHSISAAAAQTGYGTDIALSRAFKAATGVAPGQ 318 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 4/137 (2%) Query: 174 DARILGKQIIREILYYVLTGPCGGALLAL----VSRQTHFSLISRVLKRIENKYTENLSV 229 + +++ K ++ E+L Y+L G + L S++ +++ + +EN Y E +++ Sbjct: 134 EFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSKSQRRQQQIVNYTVYYLENHYKEEITL 193 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 E+LA + +S + FK T SP+ YL RL +A+ M+ ++ + A VGY+ Sbjct: 194 EKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIRLKRAKDMLKNENLTIKEVASAVGYQD 253 Query: 290 ASQFSREFKRYFGVTPG 306 A FS+ FK+ +GV+P Sbjct: 254 AYHFSKSFKKLYGVSPS 270 >UniRef50_C4ZF37 L-rhamnose operon transcriptional activator n=4 Tax=Clostridiales RepID=C4ZF37_EUBR3 Length = 291 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 1/119 (0%) Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 ++VL C L S++T + VLK +EN Y + +S+ +A A S S F Sbjct: 167 FFFVLDNRCRNLTKPLKSKKT-LDKMKVVLKYVENNYADKISIADIADVAGFSESHFMRY 225 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FK TS + YLK+YRL A ++ + + VG+ES S F+R FK+++G+TP Sbjct: 226 FKETMGTSFVDYLKDYRLTMAARLLQSSDSSVLSISGEVGFESLSYFNRAFKKHYGMTP 284 >UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3B3_GEOSF Length = 292 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 19/140 (13%) Query: 194 PCGGALLALVS-RQTHFSL------------------ISRVLKRIENKYTENLSVEQLAA 234 P G A+LA VS R TH L I+RV++ + +Y E ++V+++A Sbjct: 152 PGGEAVLAAVSIRITHSILRAAHGVNSSAPHISNRIEINRVVEYLHRRYGEKVTVDKMAT 211 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A MS S F F+ T SP+ YL + RL KAR +++ ++ A+R G+ S S F+ Sbjct: 212 VAAMSPSHFSRVFRKETGLSPMNYLIDLRLAKARRLLVSGETCVTSVALRCGFASHSHFT 271 Query: 295 REFKRYFGVTPGEDAARMRA 314 F++ FG P + ++A Sbjct: 272 DTFRKRFGCPPSDVMTTVKA 291 >UniRef50_Q0S0T6 Transcriptional regulator n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S0T6_RHOSR Length = 294 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 57/110 (51%) Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 Q I+R L I + +V+ LA A MS SAF F ++ +P YL + R+ Sbjct: 180 QVSDPFIARALDAIHESPGDPWTVQNLAQVATMSRSAFAVRFTTLVGQTPASYLTDVRME 239 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 ++ ++I DG+ + A R+GYES + F R F+R+ G P + R++ Sbjct: 240 TSKTLLIRDGLSIAETAHRLGYESEAGFRRAFRRHTGSAPAAWRGQQRSL 289 >UniRef50_A6VY86 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VY86_MARMS Length = 308 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 5/114 (4%) Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 GP G L A +R + + L+ + + +VE LA A MS S+F FK+V Sbjct: 188 GPTQGWLSAFANRN-----LRQALEAMHRAPEQVWTVESLAHTAGMSRSSFAACFKAVVG 242 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 SPL YL +R++ A ++ H + S + +VGYES S FSR F R TPG Sbjct: 243 QSPLDYLTRWRIYCATRLLQHGNLTLSEISSQVGYESVSAFSRVFVRITAKTPG 296 >UniRef50_A8ZMX0 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMX0_ACAM1 Length = 328 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 73/269 (27%), Positives = 116/269 (43%), Gaps = 32/269 (11%) Query: 63 PVMYEPG-IIILFSG--HKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLR 119 P++ E G ++I FSG H+I E + EY+L +PF C A S + L Sbjct: 75 PMVVEAGEMVICFSGSPHQISQGTEP--PSISVEYVLSGGEIPFRCSADARS----SSLL 128 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAA-SGINSATLSE-EILCAAERLLDVMERPLDARI 177 I L+ D + P AA + A +S+ E + ++ + LD Sbjct: 129 CLCGIFYLR--------DTYLNPLFAALPPVLHAPVSQVESFQNLTGVASLIAKELDKPS 180 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSR----------QTHFSLISRVLKRIENKYTENL 227 G + E L +L C GA+ + ++R +ISR L +I + + Sbjct: 181 AGSSFMVERLLELL---CAGAVRSYMARLHPQDPSWLTGLRDPIISRALAKIHAQPGHDW 237 Query: 228 SVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGY 287 SV+ LA +S S F FK+ P+ Y+ +RLH A ++ A VGY Sbjct: 238 SVDSLAQSVELSPSRFAARFKTTLGEGPMTYVSKWRLHIASRLLNRTEKNIYEIASDVGY 297 Query: 288 ESASQFSREFKRYFGVTPGEDAARMRAMQ 316 ++ + F+R FKRYFG PG R +++ Sbjct: 298 DNLAAFTRAFKRYFGEPPGAWRTRHESVR 326 >UniRef50_B7BF73 Putative uncharacterized protein (Fragment) n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BF73_9PORP Length = 244 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 55/84 (65%) Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 +E YTE+L++E+ A+ S++ F +F +++ SP +++ +RL KA+ M++ DG+ A Sbjct: 161 MEQNYTEDLTLEEFASYTGRSLATFKRDFAKISTLSPQRWITEHRLEKAKKMLLEDGVSA 220 Query: 279 SAAAMRVGYESASQFSREFKRYFG 302 + VG+++ S FS+ FK+ +G Sbjct: 221 QEVSYMVGFKNRSHFSQAFKKQYG 244 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 57/96 (59%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I++++ I KY+E+LS+ LA E ++SV F H FK VT +P++Y+ R+++A+ ++ Sbjct: 199 INQMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLL 258 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + A VGY++ FSR F+ G+ P E Sbjct: 259 SESSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSE 294 >UniRef50_A8UP06 Sensor protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UP06_9FLAO Length = 1315 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 1/104 (0%) Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 V+ Q +LI+ + + I NK + LS+EQLA + S + H K++T+ S Y+ + Sbjct: 1206 VANQLDLNLIANLQEHILNK-SNKLSIEQLAKKLGTSRTQLHRKIKALTNMSVTNYINHI 1264 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 R+ KA+ ++ + + ++ A +G+ES++ FSR FK+ G+TP Sbjct: 1265 RVEKAKFLLKNTKLNSNEIAYEIGFESSTYFSRVFKKELGITPA 1308 >UniRef50_C3QVG6 Two-component system sensor histidine kinase/response regulator n=3 Tax=Bacteroides RepID=C3QVG6_9BACE Length = 944 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 85/152 (55%), Gaps = 7/152 (4%) Query: 163 ERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI-EN 221 ++LL + R ++ + I +I Y T P GGA+ SR L+S+++ ++ EN Sbjct: 793 QQLLAELARERESHRTHEMFINQITYGACT-PQGGAM----SRADE-QLMSQLIAKVREN 846 Query: 222 KYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAA 281 N +VE LAA NMS S+ H K++T S L +++ RL +A ++ ++ + Sbjct: 847 LSDANYNVEALAAAMNMSRSSLHRKIKALTDLSSLDFIRIIRLKRAAELLQEGELRINEI 906 Query: 282 AMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + RVG++S S F++ F++ FGVTP E A + + Sbjct: 907 SDRVGFQSPSYFAKIFQKQFGVTPTEFAQQNK 938 >UniRef50_B5ZFX2 Transcriptional regulator, AraC family n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZFX2_GLUDA Length = 315 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 52/94 (55%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 ++R L+ I + + +VE+LA A MS SAF F TSP+ Y +R+++AR M+ Sbjct: 207 LARALQIIHGEASPPWTVERLARHAGMSRSAFADRFARTLGTSPINYATQWRINQARSML 266 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 M + A + G++S S FS F R GV+P Sbjct: 267 ASRDMPMAQIARQAGFQSVSAFSTAFSRVVGVSP 300 >UniRef50_C6LDG4 Transcriptional regulator, AraC family n=3 Tax=Clostridiales RepID=C6LDG4_9FIRM Length = 369 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/94 (41%), Positives = 52/94 (55%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + RVL+RIE Y + L+V +AA S S F FK +T TSPL YL RL A + Sbjct: 271 LKRVLQRIEQDYAKPLTVPDMAAVCGCSSSHFMRWFKRMTGTSPLAYLNERRLAAAAENL 330 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 K A G+E+ S F+R+FK+ +GVTP Sbjct: 331 RETDDKILVIAENAGFENLSNFNRQFKKRYGVTP 364 >UniRef50_D1BRX4 Transcriptional regulator, AraC family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BRX4_XYLCX Length = 324 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 49/96 (51%) Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 ++ VL + ++E LAA A++S SAF F +V P Y+ +RL A M Sbjct: 202 VLGPVLAAVHTDPARPWTLESLAALAHLSRSAFAERFAAVVGEPPAAYVAGWRLGLAARM 261 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 + G +A A RVGY+S F R F R G+TPG Sbjct: 262 LCEPGASVAAVAERVGYDSVPGFHRAFTRRHGMTPG 297 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 80/317 (25%), Positives = 130/317 (41%), Gaps = 37/317 (11%) Query: 6 AQSNCRIIPKKLRDMKREEICRLLAD---KVNKLKNKENSLSGLLPDVRLLYGETPFART 62 A+ NCR +P L CR D K+ L+ E+S+ ++P V Sbjct: 10 AKVNCRQMPGTL---VFASCCRRWQDLLVKIYTLRQTEDSV--IIPSV------------ 52 Query: 63 PVMYEPGIIILFSGHKIGYINERVF--RYDAN-----EYLLLTVPLPFECETYATSEVPL 115 EP I+ + SG+ + I ER + AN ++ L T P P+E A E L Sbjct: 53 ---AEPFIVWVLSGNAV--IEERELDGEWTANHVAAGDFYLTTSPTPYELRWKAVGEAQL 107 Query: 116 AGLRLNVDILQLQELLMDI-GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP-- 172 + L + + ++ ++ G+ SG + LS + + D +P Sbjct: 108 EVMHLYLGLPLFRQAAREVLGKAGRRASLREVSGRHDPVLSVFLGQLHREITDSGGKPSL 167 Query: 173 LDARILGKQI-IREILYYVLTGPCG-GALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 L AR + + + + + +Y T G G L + S + R+ +E E ++ Sbjct: 168 LFARGIAQSVAVHLVRHYADTNTAGTGDAHGLRGGRLPASSLRRITDFMEAHLDEEFRLD 227 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 +LA EA MS F F+ T SP +Y R+ AR ++ + VGY S Sbjct: 228 ELAREAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLLRETSRSVIEVGLEVGYSSP 287 Query: 291 SQFSREFKRYFGVTPGE 307 S F++ F+R GV P E Sbjct: 288 SHFAQVFQREAGVPPSE 304 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 9/182 (4%) Query: 133 DIGEDEHFQPSMAAS-----GINSATLSEEILCAAERLLDVM--ERPLDARILGKQIIRE 185 D+ D+ QP ++ + INS + L + +D + +RP ++ K + + Sbjct: 107 DLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQ 166 Query: 186 ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 I +Y+L CG + +S++ I +L + + +N+S+E++A S S F Sbjct: 167 I-FYLLISNCGLNQIKPISKKA-LEKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMK 224 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FK S +QYL +YRL A ++ A+ G+++ S F+R FK+ +G+TP Sbjct: 225 FFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITP 284 Query: 306 GE 307 G+ Sbjct: 285 GK 286 >UniRef50_A5KJJ5 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJJ5_9FIRM Length = 398 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S+ L+S +L + + TE L++E + E +S S+ FK+ +TSP YL N + Sbjct: 280 SKSAQNDLLSEILAYMNKRLTEPLTIEDICHEFFISRSSLQALFKTHLNTSPKNYLLNIK 339 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 L K++ +I + S A R+G+ S FSR FK+YF TP D AR A N Sbjct: 340 LQKSKELIRENQYTISEIAYRLGFSSIHYFSRLFKKYFNTTPS-DYARKAAENQN 393 >UniRef50_C0ZJ95 Probable transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZJ95_BREBN Length = 530 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 55/96 (57%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + R + +E Y E L+V+QLA EAN+ + FK +T PL Y+ R+++A+ ++ Sbjct: 170 VERSIAYVEKHYQEPLTVDQLAHEANVPRWRYTQLFKEMTGEIPLDYMNQLRINRAKQLL 229 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + G + + A VG+ S FSR FK+ G+ PG+ Sbjct: 230 LMTGDRINEIAQNVGFNSEYYFSRRFKQRVGLAPGK 265 >UniRef50_A8L3A5 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec RepID=A8L3A5_FRASN Length = 349 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 57/107 (53%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 IS+ L + ++ E ++E LA E MS SAF +F+ + SP +L R+ ++ ++ Sbjct: 213 ISKALLVMYTRFVEPWTIESLAREVGMSRSAFAASFREIVGESPSSHLVLRRMRESARLL 272 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A +VGY+SA F F++ FG+TPGE R R + G Sbjct: 273 AESDIPLGAIPQKVGYKSAVGFHIAFRKRFGITPGEYRQRFRRVTGK 319 >UniRef50_C9XTT1 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XTT1_CROTZ Length = 326 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 12/194 (6%) Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER-LLDVMERPLD---ARILGKQII- 183 ELLM++G E P A + A L EIL +R + + E LD AR G+ ++ Sbjct: 120 ELLMNVGHCEFDTPDKA---LIVALLPSEILIQGQRRFITLFELLLDESRARRPGRDVVM 176 Query: 184 ----REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 + +L L + A + R ++ L I K + + QLA E MS Sbjct: 177 MHLLQLLLVESLRSDPALSKTAGILRGLQHDRVATALHLIHEKPGADWQIAQLARECAMS 236 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S+F F SP+QYL +R+ AR +I A+R GY+SAS FS F + Sbjct: 237 RSSFFAVFSETVGMSPMQYLFFWRMSLARKALISGQDNIEQIALRTGYQSASAFSVAFAK 296 Query: 300 YFGVTPGEDAARMR 313 + G+ PGE R R Sbjct: 297 HAGMPPGEFRRRSR 310 >UniRef50_Q1VS20 Transcriptional regulator, AraC family protein n=3 Tax=Flavobacteriaceae RepID=Q1VS20_9FLAO Length = 279 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 69/128 (53%), Gaps = 8/128 (6%) Query: 183 IREILYYVLT---GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 EI+ Y+L L +L+S++ IS +E+ NL +E++A NMS Sbjct: 154 FEEIMLYLLNKYGSTFEDYLHSLISKE-----ISLFKNVVESNVNSNLKLEEIAFLCNMS 208 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 +S F +F S P ++L++ RLHKA+ ++ +KAS + +GY + S FS FK+ Sbjct: 209 LSTFKRHFTSEYKEPPGKWLQDKRLHKAKELLEGGDLKASDIYLDIGYNNLSNFSVAFKK 268 Query: 300 YFGVTPGE 307 FG++P + Sbjct: 269 KFGISPTD 276 >UniRef50_A9HPW1 Transcriptional regulator, AraC family protein n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HPW1_9RHOB Length = 273 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 54/94 (57%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I RV+ I + ++LS++QLA A MS +H F ++ SP Q +++ R+HKA M++ Sbjct: 4 ILRVIDYIHTQAADDLSLDQLADVAAMSRFHWHRVFTAIMGASPAQIIRSVRMHKATMLL 63 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 + + + A VGY + FSR FK +G TP Sbjct: 64 LRTDLPIAQIAAHVGYSNDRSFSRTFKDIYGQTP 97 >UniRef50_Q21H00 Transcriptional regulator, AraC family n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21H00_SACD2 Length = 297 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 39/96 (40%), Positives = 51/96 (53%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 IS VL RI + SVE L ANMS SAF + F +T SPLQY+ RL++A ++ Sbjct: 194 ISMVLSRIHAEPQHKWSVESLGQIANMSRSAFSNRFSELTQMSPLQYVMFIRLNRASRLL 253 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 I A +GY+S + FS F + F PGE Sbjct: 254 IESDYSLGQIAELIGYQSEAAFSLAFSKQFDCRPGE 289 >UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XH00_CALS8 Length = 275 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 22/241 (9%) Query: 73 LFSGHKIGYINE-RVFRYDANEYLLL----TVPLPFECETYATSEVPLAGLRLNVDILQL 127 + G K INE F+YD+N +++L V L E +T A L + +D + Sbjct: 42 ILQGDKYVEINESEKFKYDSNSFVILPPYSRVKLEIEEKTKA--------LVIEIDSYLI 93 Query: 128 QELLMDIG-EDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIRE 185 +L + E E ++ + S ++ ++++D R ++ L +E Sbjct: 94 NHVLSKLKIEFEPYELGNVNNIFFVGKYSPDLTQTYKKIVDTFFSRKVNREFLLDLYTQE 153 Query: 186 ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 +Y + GA + + + I +L I N Y L + +A E NM F Sbjct: 154 FVYDIF--KYRGAEKIINDKNSE---IYHILDYINNNYLRRLKISDIAKEFNMKEYEFTR 208 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FK T SP +Y+K+ +L+KA+ ++ + + + +GYE+ S F +EFK FGVTP Sbjct: 209 YFKKFTGKSPKEYIKDLKLNKAKELLKFENV--TDVCYDIGYENISHFIKEFKNKFGVTP 266 Query: 306 G 306 Sbjct: 267 N 267 >UniRef50_A9DAF9 Transcriptional regulator, AraC family protein n=3 Tax=cellular organisms RepID=A9DAF9_9RHIZ Length = 334 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 7/127 (5%) Query: 182 IIREILYYVLTGPCG--GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 +I+ I ++ T P G L AL Q + + L + + + SVE LA+ A MS Sbjct: 190 VIQAIRSWLETSPSADTGWLKALRDPQ-----VGKTLALMHREPGHDWSVETLASRAGMS 244 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 SAF F + +PL+YL +R+ AR +I + + +GY+S + F R FKR Sbjct: 245 RSAFAARFSELVGETPLKYLTKWRMRVARNRLIDTSDALAVISNDLGYQSEASFCRAFKR 304 Query: 300 YFGVTPG 306 FG PG Sbjct: 305 VFGQPPG 311 >UniRef50_D2BAU8 AraC family transcriptional regulator n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2BAU8_STRRD Length = 327 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%) Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 V R ISR L + +++ E ++E LAAEA +S SAF F+ + P+++L Sbjct: 200 VLRALRHPAISRALLAVHSRFAEPWTLESLAAEAGLSRSAFAATFRDLVGEPPMRHLTGR 259 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 R+ +A ++ + + + RVGY S F F+ + G TPGE Sbjct: 260 RMQEAARLLTETTLAQNRVSERVGYRSGVGFHLAFRTWCGQTPGE 304 >UniRef50_C5EPJ4 Predicted protein n=2 Tax=Clostridiales RepID=C5EPJ4_9FIRM Length = 240 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 55/97 (56%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I + ++ IEN + ++S+E+++ +M+ + F FK T + Y+ + R+ KAR +I Sbjct: 143 IGKAIQYIENNFYRSISLEEVSQAVHMNTAYFSTLFKKQTGKKYIDYVTDLRMEKARKLI 202 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 ++ +K A A VGY S F+R +K FG TP D Sbjct: 203 LNTDLKIGAIAEMVGYGSTKHFTRIYKEKFGTTPNAD 239 >UniRef50_A8RQG1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8RQG1_9CLOT Length = 522 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 1/110 (0%) Query: 203 VSRQTHFSLISRVLKRIENKY-TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 +++ + LI + + I+N Y + + S++++A +S S F FKS T + YL Sbjct: 412 INKSRYGKLIDQAILYIQNHYMSSSFSIDEVAGAVCLSTSYFSTVFKSETGITFTDYLIK 471 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 R+ KAR ++ + MK + R GYE+A+ FS FKRY+G +P E +R Sbjct: 472 VRMEKARGLLENTSMKMYEISSRAGYENAAYFSAAFKRYYGKSPSEFQSR 521 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 59/106 (55%) Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 L+ + + I L I + Y ENL+++ ++ N+S S+ FK + +P YL + Sbjct: 188 LIKQTKNIMQIKAALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLS 247 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 YR+ ++ ++ +GM + AA+ VG+ S+S +S FK+Y TP E Sbjct: 248 YRIQRSIPYLLSEGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTE 293 >UniRef50_A5V4G7 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V4G7_SPHWW Length = 319 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 6/169 (3%) Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 P + A G+ + + I AA R + R A ++++R ++ + GP G + A Sbjct: 128 PELEAFGMLENVIDDRISDAAFRFRRDLLRDGAADDSVQELVRTVIDVLRRGP--GDIGA 185 Query: 202 LVSRQTHFSL-ISRVLKRIENKYTENLSVEQLAAEANMSVSAFH--HNFKSVTSTSPLQY 258 R SL + R L I Y++ +SVE++AA A +SAFH H F+S +P QY Sbjct: 186 GSERVRISSLRLKRALDYIGRHYSKKISVEEIAA-AVGGISAFHFAHVFRSSLGQAPHQY 244 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + ++LH+AR ++I + A VG+ S + + F R GVTP + Sbjct: 245 VLEHKLHRARTLLIETQGDIAGIAYAVGFSSQAHMTEAFSRRMGVTPAQ 293 >UniRef50_Q099H5 Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q099H5_STIAU Length = 225 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 27/172 (15%) Query: 145 AASGINSATLSE---EILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 A+SG +A + + ++L + ++E P DA L REI+Y + TGP GGA Sbjct: 69 ASSGKAAAFIGQSDSKLLEVVLHFMRLLEDPSDAAFLAPSSKREIIYRLFTGP-GGA--- 124 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + + + + ++ +FK PLQY K+ Sbjct: 125 --------------------DFCQGMQLGRQGVGIGRAIDWLTAHFKQPLKMGPLQYQKH 164 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL +AR + + ++ AA V YES SQF RE++R FG+ P D MR Sbjct: 165 LRLEEARRLRLGGLADSTGAAFAVDYESPSQFIREYRRRFGLPPLRDVKSMR 216 >UniRef50_A4W931 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=A4W931_ENT38 Length = 340 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 ++R + I + SV +LAA++++S S F F S+ P +Y + R+ A I Sbjct: 231 LARAILTIHRDTSREWSVAELAAQSHVSRSVFAERFTSIIGIPPQRYAREVRMRLAGHWI 290 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 IHD + A+R+GY S + FSR FKR G PG A R R+ + Sbjct: 291 IHDKISIDTVALRLGYASQAAFSRAFKRINGYPPG--AMRQRSAK 333 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 212 ISRVLKRIENKYT-ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 I + + IE Y E+LS++++A MSV+ FKS T+ + ++YL R+ KAR + Sbjct: 246 IQKAKRFIEENYAMEDLSLQEVADSVGMSVTYLSRTFKSETNMNFVKYLVQVRMEKAREL 305 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 + + A AA RVG+ FS+ FK++ G+TP + +AM G Sbjct: 306 LAESELSAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAYRKQCKAMNG 352 >UniRef50_A7HFH7 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFH7_ANADF Length = 327 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 49/94 (52%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I L RI +VE LAA A MS S+F F + + SP +YL +R+ A + Sbjct: 226 IGLALARIHRNPGHPWTVETLAAAAGMSRSSFAQRFVQLLNVSPARYLLQWRMRLAATWL 285 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 M + AA +VGY+S + FSR FKR G+ P Sbjct: 286 RSGSMTVAEAAAQVGYDSDAGFSRAFKRAMGLPP 319 >UniRef50_C5EE80 Helix-turn-helix domain-containing protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EE80_9FIRM Length = 323 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Query: 207 THFSLISRV---LKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 H S RV L+ I +Y L +E +A AN+SVS +FK V S SP+ YL +YR Sbjct: 189 VHDSRYQRVRCCLEYIHKEYAGRLRLEDIARAANVSVSECCRDFKEVLSQSPVDYLISYR 248 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 + M+ H A+ VG+ +S FS F RY G TP Sbjct: 249 VRMGEYMLAHSDKSVLEIALAVGFSGSSHFSNTFCRYMGCTP 290 >UniRef50_C6B202 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=C6B202_RHILS Length = 303 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 46/94 (48%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I + I N +VE LA MS SAF FK + +PL Y+ +R+H+AR + Sbjct: 200 IGAAISLIHNSPGHRWTVEALATRIGMSRSAFAQRFKELVGVAPLDYVTRWRMHRAREAL 259 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 + + + A +GY S S F FKR FG P Sbjct: 260 RREDVSVAGLAAALGYSSESAFGNAFKRVFGRAP 293 >UniRef50_UPI0001C34C27 transcriptional regulator, AraC family protein n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34C27 Length = 262 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 52/93 (55%) Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 +E Y ++S+ +LA + N++ S F F+ T SP QYL +YR+ +A ++ G Sbjct: 162 LEANYMRDVSIGELAGKLNLNRSYFSTLFRKKTGKSPQQYLTDYRMGRACQLMTEHGYSP 221 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 AA+ GY FSR FK++FGV P E + R Sbjct: 222 GKAALSTGYPDIFSFSRMFKKHFGVFPREYSRR 254 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 58/100 (58%) Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 V++ IE Y E + +++LA A MS S F FK +T+ SP++Y+ +YR+ +A + Sbjct: 193 VIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQT 252 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K A+ VG+ S S F+ F++ FG TP E +R++ Sbjct: 253 DAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQV 292 >UniRef50_B1KKM5 Transcriptional regulator, AraC family n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKM5_SHEWM Length = 330 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 58/98 (59%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +SR L I + ++ +VE L +MS ++F + F+S+ +PL YL +R+H A ++ Sbjct: 225 LSRALILIHQEPSKAWTVESLGRAVSMSRTSFANRFQSIVGMTPLAYLSQWRMHIAYGLL 284 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + + + A +VGY+S + F + FK+ G++PG+ A Sbjct: 285 VEGELSMLSIAEQVGYKSEASFGKAFKKIVGISPGKVA 322 >UniRef50_A6DMX5 Two-component response regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMX5_9BACT Length = 275 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 54/95 (56%) Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 LIS+V ++ +T + +E LA MSVS+F F +T TSP +Y+ RL +AR + Sbjct: 172 LISKVDAYLDECHTGKIKLEDLANHCAMSVSSFRFKFTEITRTSPGRYIIYKRLERAREL 231 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 +++ + + + Y S F R+FK++ GVTP Sbjct: 232 LLNSKLSVLEISTELSYPDVSDFCRQFKKFIGVTP 266 >UniRef50_C6W947 Transcriptional regulator, AraC family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6W947_ACTMD Length = 309 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%) Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H +S + + +V LA A MS SAF F+ T SPL +L +R+H+A Sbjct: 192 HDPRLSLATRAMHGDLAHPWTVASLAGRAGMSRSAFAAAFRERTGESPLAHLTYWRMHRA 251 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 + + + +G A+RVGYE+ + SR F+R GV+PG Sbjct: 252 KAL-LREGRTLQEIAVRVGYETDTALSRAFRRAEGVSPG 289 >UniRef50_Q12NJ3 Sensor protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NJ3_SHEDO Length = 1396 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 1/83 (1%) Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 NLSV+ L A A++S F+++ +PL ++ YRL KA+ M + G + S ++ V Sbjct: 1313 NLSVQDLVAAAHLSERQLARKFQAILGITPLDFITQYRLAKAKTM-LQQGHRISQVSLDV 1371 Query: 286 GYESASQFSREFKRYFGVTPGED 308 G+ SA+ FSR++K+ +GV+P +D Sbjct: 1372 GFSSANYFSRQYKKKYGVSPSQD 1394 >UniRef50_A5W5M8 Transcriptional regulator, AraC family n=15 Tax=Pseudomonas RepID=A5W5M8_PSEP1 Length = 281 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 11/119 (9%) Query: 198 ALLALVSRQT---------HFSL-ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNF 247 A+LALV R H L ++R + +E++ + S+E LAA N+S F F Sbjct: 151 AVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALAAAVNLSPFHFARVF 210 Query: 248 KSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 + T P +LK RL +AR M+ H G+ AS A +G+ S SR+FK+ +GVTPG Sbjct: 211 RQATGLPPHAWLKQRRLARAREMLKH-GLAASQVAFDLGFADQSHLSRQFKQAYGVTPG 268 >UniRef50_C1I3A1 Response regulator receiver protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3A1_9CLOT Length = 249 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 59/107 (55%) Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 +V + + I + LK I++ Y +++S+ +A +S F FK + YL Sbjct: 141 IVKPKAYSRSIEKALKYIDDNYKKHISLMDVAKHIYLSHEYFSRLFKEEVGENFSTYLTI 200 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 YR+ KA+ +I + MK S A+ VGY +A FS+ +KRY G++P ED Sbjct: 201 YRIKKAKELIKNTDMKISQIALEVGYSNAGYFSKNYKRYTGISPEED 247 >UniRef50_Q5LIH5 Sensor protein n=16 Tax=Bacteroides RepID=Q5LIH5_BACFN Length = 1329 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 16/162 (9%) Query: 156 EEILCAAERLLDVMERPLDARILGKQI-----IREILYYVLTGPCGGALLALVS------ 204 E C A+ + E+P R L KQI +R+ + ++ GG A +S Sbjct: 1168 EGFECGADVYI---EKPFSIRQLRKQIENLLKLRQAFHKMMAELSGGNGAAPISPVEYSV 1224 Query: 205 RQTHFSLISRVLKRIENKYT-ENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 Q L+++V +E + + EN SV+ LA NMS S F+ K++ P YLK R Sbjct: 1225 SQKDCELMAKVRAAVEAQLSDENFSVDTLAESLNMSRSNFYRKIKALAGMPPNDYLKTIR 1284 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 L+KA + + G++ + ++G+ S+S F++ FK FGV P Sbjct: 1285 LNKAAEL-LKSGVRITEVCEKIGFSSSSYFAKCFKIQFGVLP 1325 >UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia RepID=A4TH83_YERPP Length = 292 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 16/226 (7%) Query: 96 LLTVPLPFECETYATSEVPLAGLRLNVDILQLQELL--MDIGEDEHFQPSMAASGINSAT 153 L +P+ + E + + P L L +D +L ++ +D+ + QP + T Sbjct: 77 LAWLPVRWPHEHFPNKQEPWEILWLRIDGAKLNNIMQILDVAQ----QP------VFEFT 126 Query: 154 LSEEILCAAERLLDVME-RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI 212 E I RL D+M+ L A + +++Y +L A + V +H L Sbjct: 127 SPETITDIYHRLFDLMQSHTLVADAHCDVLCSQLIYTLLENRSFDATKSPVI--SHRGL- 183 Query: 213 SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMII 272 R++ +I + Y ++ +++ +S S F+ + SPL++LKNYRL +AR +++ Sbjct: 184 GRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQETFNQSPLRWLKNYRLSQARRLLV 243 Query: 273 HDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 S A VGY FSR+F R G++P + + R + + Sbjct: 244 ETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDFRRQERQLDND 289 >UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DIQ4_CLOTH Length = 204 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%) Query: 153 TLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI 212 +S E++ ++ + RI+G + I E L ++ C + +V +T +LI Sbjct: 43 VISHEVMVYIKKFIT----EYQERIIGYKDILEALSEII---CHSLIRGIVGVKTEKNLI 95 Query: 213 S------RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 S +++ + + + ++VE+LA + NMS S F FK +T SP+ YL N R+ K Sbjct: 96 SDNFEIENIIEYMHQHFGQKITVEELAKKTNMSKSHFIRVFKKITGLSPMDYLINIRIEK 155 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 A+ ++ S + G+ S S FS F + GV+P + Sbjct: 156 AKKLLGAGTKNISEISFLCGFNSLSHFSSTFSKIVGVSPSK 196 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 53/96 (55%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I RV++ I+ + LS+ QLAA A MS S F FK T PL YL RL +AR ++ Sbjct: 190 IHRVIEYIQTHAGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPLAYLNRVRLEQARKLL 249 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 ++ A+ G+ S S F+ F+R++G +P + Sbjct: 250 RTGECSVTSVALSCGFASPSHFTDSFRRFYGQSPTD 285 >UniRef50_A6ES38 AraC-type DNA-binding domain-containing protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ES38_9BACT Length = 306 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 18/254 (7%) Query: 68 PGIIILFSGHKIGYINE-RVFRYDANEYLLLTVPLPFECETY-----ATSEVPLAGLRLN 121 P I + +G KI ++NE F + E +V +P E AT E P L L Sbjct: 50 PVIASMLTGKKIMHLNELSPFEFLPGE----SVVMPAHQEMVIDFPIATKEKPTQCLALG 105 Query: 122 VDILQLQELLMDIGE-----DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDAR 176 +D ++ E+ E DE ++ + T E+ ERL+ + ++ Sbjct: 106 IDAEKIHEVAYKFNEQILLKDEKDVWTLEEGTASHLTNQIEVNYLIERLVTTFTKNTASK 165 Query: 177 -ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI-ENKYTENLSVEQLAA 234 +L +I+E++ +L ++L + + I V+K I EN +N++V+QLA Sbjct: 166 DVLLDLMIQELIVRLLQTKAKHSILNDHLQIFSDTRIGHVVKFIRENLTDKNINVDQLAE 225 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA-RMMIIHDGMKASAAAMRVGYESASQF 293 +A MS S+FH FK+ SP+ ++ + ++ A ++M + M S A + G+ + S F Sbjct: 226 KAYMSTSSFHKKFKNTLGISPIDFINSEKIKFAKKLMKRNKKMLISEIAYKSGFNNVSYF 285 Query: 294 SREFKRYFGVTPGE 307 +R+FK+ +TP + Sbjct: 286 NRQFKKLEFMTPQQ 299 >UniRef50_A4F0L2 Transcriptional regulator, AraC family protein n=7 Tax=Rhodobacterales RepID=A4F0L2_9RHOB Length = 330 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 51/94 (54%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +SR L ++ +VEQLA A MS + F +F + +P+QYL +R+ A + Sbjct: 227 LSRALSAFHKAPAQSWTVEQLARIAGMSRTGFAQSFSAKMGLTPMQYLTTWRMQIACQGL 286 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 + G+ + AA GY S + FSR F++ GV+P Sbjct: 287 VEQGLNVADAAEMAGYASEAAFSRVFRKQIGVSP 320 >UniRef50_C3WDI9 Two component transcriptional regulator n=2 Tax=Fusobacterium RepID=C3WDI9_FUSMR Length = 269 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 54/102 (52%) Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 QT + + L++I+N+Y E +S+ ++A E +S FK + L+ L YR+ Sbjct: 155 QTKNKYVYKALQKIQNRYNEKISIIEIADELGVSSGYLSRKFKEELEETFLEILNKYRVQ 214 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 KA +++ + +K + +VG+ F FK+Y G+ PGE Sbjct: 215 KAMKLLVKEDLKMYEISEKVGFSDYKHFCTVFKKYLGMAPGE 256 >UniRef50_Q0JZZ7 Transcriptional regulator, AraC-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0JZZ7_RALEH Length = 347 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H +SRVL I E + ++ LA AN+S F FK +P+ Y++ RL +A Sbjct: 236 HPQALSRVLDYIHGT-PEAVKLQALADMANVSRFHFARMFKRSIGETPMAYVERVRLLRA 294 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 R MI + A VG+ S F R FKR+FG TPGE A A QG Sbjct: 295 REMIRSGDYPLALVATLVGFADQSHFGRRFKRHFGCTPGEFAGHKDASQG 344 >UniRef50_C6DED7 Transcriptional regulator, AraC family n=8 Tax=Enterobacteriaceae RepID=C6DED7_PECCP Length = 377 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 55/96 (57%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I +V + +E+ + LS+ ++A NMS S +F+ + S +YL+N RL +A + + Sbjct: 277 IQQVREMLESGSADQLSMSEIAKSVNMSESTLQRHFRQTFNMSVFEYLRNSRLQRAMLAL 336 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 DG+ + AA GY S + F+ +R FG+TPG+ Sbjct: 337 QKDGIGIAQAASIAGYNSPANFATALRRAFGITPGQ 372 >UniRef50_UPI0001C355CA AraC family regulatory protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C355CA Length = 327 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 1/133 (0%) Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 +++ +L+ + P L V+R +I +V +RI EN++++QLA E +S Sbjct: 190 KVLELLLFLRMIDPEQERALDRVTR-NQIDIIRQVRRRITQNLQENITIDQLAREYCISP 248 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 ++ NFK V ST+ YL+ R+ +A +++ + A +GY + S+FS FK Sbjct: 249 TSLKSNFKQVYSTTIKDYLRKVRMERASALLLTTDSTVADIAASLGYTNQSKFSAAFKTV 308 Query: 301 FGVTPGEDAARMR 313 +G+ P E + R Sbjct: 309 YGLAPAEYRKKCR 321 >UniRef50_UPI0001C358FB two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C358FB Length = 273 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 55/97 (56%) Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 +I + L +E+ Y E++S+E ++ ++ + F FK T S +QYL YRL KA+++ Sbjct: 164 VIRKALNYMEDHYHEDISLESISEVVFLNKNYFSELFKKETGKSFVQYLTEYRLEKAKLL 223 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + G K S A G+++ S F FK+Y G TP E Sbjct: 224 LAISGFKGSEVADMTGFQNNSYFISVFKKYVGCTPKE 260 >UniRef50_D1N9J7 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9J7_9BACT Length = 296 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 53/94 (56%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +++VL I++ Y LS+ A +S S F+ T+P +YL ++R+ +A MM+ Sbjct: 198 LTKVLGLIDSDYGRPLSIADFTAAGGVSESGLARLFRRYLHTTPYRYLTSHRMRQAEMML 257 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 + + A RVGY++ FS EFK++FG +P Sbjct: 258 LQGVLSVKEIAARVGYDNPLNFSTEFKKFFGSSP 291 >UniRef50_B3CE13 Putative uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CE13_9BACE Length = 283 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 56/98 (57%) Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H LI++V+ I + L++E LAAE +MSV FH FKS + Y+ R+ +A Sbjct: 9 HQELINQVIDYIHTHLHKALTLEMLAAEMHMSVYHFHRLFKSHLQETLSAYITRQRMERA 68 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 M + + + ++GY++A FS+ FKRYFGV+P Sbjct: 69 VMYLQTRDLSLQELSEKMGYDTAQSFSKAFKRYFGVSP 106 >UniRef50_A9FWP2 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FWP2_SORC5 Length = 304 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 51/95 (53%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 ++RVL+ ++ K E SVE LA A +S +A F + PL+YL R+ +A ++ Sbjct: 188 VARVLRLMQEKPAERWSVEALAKAAGLSRAALARRFLAELGVPPLRYLAELRMQRAAELL 247 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 +A A VGY+S FSR FKR+ G PG Sbjct: 248 AEGDGSLAAVAAEVGYDSEFAFSRAFKRHTGEAPG 282 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 4/138 (2%) Query: 170 ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSL--ISRVLKRIENKYTENL 227 E+P +L K + I YY+ A + R+ L I L I + Y+ ++ Sbjct: 142 EKPKGYELLVKGYLFVIFYYLFNKRYVTA--SSTDRELDLKLEKIKSALDFINSNYSSDI 199 Query: 228 SVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGY 287 ++ LA AN+S F FK +T +P+ Y+ +R+ KA +I + + S A VG+ Sbjct: 200 DIDLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGF 259 Query: 288 ESASQFSREFKRYFGVTP 305 + S F + FK Y GVTP Sbjct: 260 NNVSYFIKVFKEYVGVTP 277 >UniRef50_UPI0001789459 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789459 Length = 769 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (51%) Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 +L+ I Y + LS+E A NMS+ F FK ++Y+ YRL KA+ ++ Sbjct: 671 ILEYIHEHYDQELSIEHFAGMMNMSIGHFSRTFKEEVGEKYVEYIAKYRLMKAKQFLLET 730 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 +K A +VGY + R F+RY G+TP + Sbjct: 731 DLKIDEIAEKVGYWGRNSLIRAFRRYEGITPAK 763 >UniRef50_A7VNA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNA5_9CLOT Length = 282 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 52/96 (54%) Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 SL+++VL + Y N ++E A N+SV FK VT SP QYL R+ +AR Sbjct: 178 SLVTQVLNDMYKTYYRNYTIEDYAKRHNVSVCWLIRRFKQVTGESPNQYLIQIRIRRARE 237 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 ++ + A +GYES FSR+FK+ GV+P Sbjct: 238 LLESSRLNMGEIASVLGYESPLYFSRQFKQLQGVSP 273 >UniRef50_B5XWK6 Transcriptional regulator, AraC family n=5 Tax=Klebsiella RepID=B5XWK6_KLEP3 Length = 306 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +++ ++ + +V LAA+ +S S F +T +P+ YL +R+ A + Sbjct: 197 VAQAIRLLHQAPARRWTVNDLAADCALSRSTLFERFTDLTGMTPMGYLLGWRMTLAMQWL 256 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 G+ + A R+GY SAS FS F RY G++PG+ AR RA Q Sbjct: 257 SETGISIADIAERIGYGSASAFSVAFTRYTGISPGK-YARQRATQ 300 >UniRef50_A9CLF9 Transcriptional regulator, AraC family n=5 Tax=Rhizobiales RepID=A9CLF9_AGRT5 Length = 299 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 ++ L+RI N++VE LA A MS S F F+ +P++Y +R+ A+ ++ Sbjct: 197 LAPTLRRIHEDPGRNMTVEGLAQFAAMSRSTFFERFRREVGVAPMEYATGWRMALAKELL 256 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 D + + A RVGY SAS FS F R+ G TPG Sbjct: 257 RKD-VATAEIAQRVGYGSASAFSVAFSRHVGQTPG 290 >UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSM7_9BACI Length = 550 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 7/130 (5%) Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 R + +E+LYY++ L A SR T L ++R N ENL++EQLA Sbjct: 153 RFYSQFAFQELLYYIMKN---RRLQAKESR-TSLELAKEYMERYFN---ENLTIEQLARI 205 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 AN+S F FK S + YL R++KA+ ++ K A +VGY FSR Sbjct: 206 ANISPKYFVDLFKKTYGISAIDYLTELRINKAKQLMAQSDAKLRDIAHQVGYNDEFYFSR 265 Query: 296 EFKRYFGVTP 305 +FK+ GVTP Sbjct: 266 KFKKKVGVTP 275 >UniRef50_UPI0001AEBE6B AraC family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBE6B Length = 298 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/102 (34%), Positives = 55/102 (53%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I+ L+ + N ++ +VE LA+ ANMS S + FK+ +P++YL +RL A I Sbjct: 195 IANSLQALHNAPEQHWNVEMLASIANMSKSNYAAKFKACAGVTPIKYLTQWRLRCACTEI 254 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 I A + GYE+ + FS+ FKR GV+P + + R Sbjct: 255 IQSNKPLITIANQYGYETEASFSKAFKREIGVSPSQKRVQAR 296 >UniRef50_Q392E1 Transcriptional regulator, AraC family n=32 Tax=Bacteria RepID=Q392E1_BURS3 Length = 349 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 47/95 (49%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + R + + N SV +LA EA +S S F F + T +P++YL R+ A I Sbjct: 243 LGRAIVALHRDPGRNWSVAELATEAGVSRSVFAERFLAATGMTPVRYLTELRMRLAAQWI 302 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 D A A R+GY S + FSR FKR G PG Sbjct: 303 TRDHETIEAVAYRLGYGSLAAFSRAFKRVVGKPPG 337 >UniRef50_C4G478 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G478_ABIDE Length = 299 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I ++L IEN Y+ +++ +A ++S+S+ FK + T+P+QYL YRL KA Sbjct: 196 IKKILFFIENNYSTTITIADIAKSGDISISSCLRLFKQILKTTPIQYLIKYRLQKAVEEF 255 Query: 272 IH-DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +G A G+ A+ F+R FK+ FG TP E A+ A Sbjct: 256 DSLEGRSIGDIAYSCGFSDATYFNRCFKKEFGCTPTEYMAKKSA 299 >UniRef50_B7X2X7 Transcriptional regulator, AraC family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2X7_COMTE Length = 304 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 15/121 (12%) Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN----LSVEQLAAEANMSVSAFHHN 246 L+GP ALL+ ++ LKR++ EN L + LAAE +S F + Sbjct: 190 LSGPSSTALLS-----------AKQLKRVQALVIENMEQPLPIAVLAAEVQLSSYHFARS 238 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK+ +P Q++ R+ +AR +++ + A+RVG+ +AS FS+ F +Y+G TP Sbjct: 239 FKATCGLTPHQFVLQQRMKRARKLMLESSDSIADIALRVGFGTASHFSQAFSKYWGTTPS 298 Query: 307 E 307 + Sbjct: 299 K 299 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 62/108 (57%) Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + ++++ + I+++++ IE+ + ++++++ +A E NMS F FK T + + YL Sbjct: 415 IKTINKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYL 474 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 N R+ KA+ ++ + + +VGY + FS+ FK+ G+TP E Sbjct: 475 TNLRVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTE 522 >UniRef50_B8I947 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I947_CLOCE Length = 539 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 61/111 (54%) Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L++ +S+ ++I++V K IE ++ E +S+ LA + ++ + FK VT T+ Sbjct: 418 ATLMSSMSKTYSHTIINQVRKTIEERFKEQISISTLARDVYLTPTYLCVLFKQVTGTTIN 477 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 YL RL KA+ ++ +K VGY S S FSR FK+Y G++P E Sbjct: 478 DYLTLTRLEKAKKLLSDPYIKLYDVCYEVGYLSPSYFSRLFKKYTGISPSE 528 >UniRef50_Q15UL8 Transcriptional regulator, AraC family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15UL8_PSEA6 Length = 316 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 18/173 (10%) Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERP--LDARILGKQIIREILYYVLTG-- 193 +H S +ASG+N + LLD ++P A I+G+ I IL + Sbjct: 149 KHQTVSTSASGLNYLL---------DALLDESKQPNKGSALIMGR-IAEAILAIIFREHL 198 Query: 194 PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTST 253 P +LA + + ++ + + K+T VE LA MS + F+ FKSV Sbjct: 199 PADNGMLAATAHPKLGAAMAAIHSEPDKKWT----VEMLAQRCFMSRAGFNELFKSVLHQ 254 Query: 254 SPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 SP++Y+ +RL A M+ + + AA+ GYE+ S FS+ FKR GV+PG Sbjct: 255 SPMEYVTQWRLGLAYRMLADENVTTLHAALASGYENESSFSKAFKRVLGVSPG 307 >UniRef50_C7PWE8 Transcriptional regulator, AraC family n=2 Tax=Actinomycetales RepID=C7PWE8_CATAD Length = 255 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 + + + N+Y + LS++++A A +S F F+S+T TSP ++L RL KA+ +++ Sbjct: 10 QAIATMWNRYADPLSLDEIADSAILSKFYFSRVFRSLTGTSPGRFLSAIRLFKAKNLLLE 69 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 M + A VGY S F+ F R G +PG R RAM Sbjct: 70 TDMSVTEVAYGVGYNSLGTFTSRFTRSVGASPG----RYRAMS 108 >UniRef50_A9CGU4 Transcriptional regulator, AraC family n=2 Tax=Alphaproteobacteria RepID=A9CGU4_AGRT5 Length = 321 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 37/266 (13%) Query: 68 PGIIILFSGHKIGYINER-VFRYDANEYLLL-TVPLPFECETYATSEVPLAGLRLNVDIL 125 PG ++ +G I R R ++LLL T P C VP+ Sbjct: 50 PGFALVLAGAAWVMIEGRDPLRLGRGDFLLLPTTPAFSLCSETGVDCVPV---------- 99 Query: 126 QLQELLMDIGEDEHFQPSMAASG------INSATL------------SEEILCAAERLLD 167 + Q+ + GE E +A G IN++ L +E+ RL++ Sbjct: 100 EPQDRAVRHGEQEGMPDFLALGGSFAFERINASLLLSLMPGLIYVPAAEKRASRLARLIE 159 Query: 168 VMERPLDARILGKQ-IIREILYYVLTG----PCGG--ALLALVSRQTHFSLISRVLKRIE 220 ++ GK+ IIR +L +L P G A+ A + + ++R L + Sbjct: 160 LLSEECAGEDPGKELIIRRMLEVLLVEALRRPDAGNVAIPAGLVKGMRLPGLARALSAMH 219 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 + +V +LA A MS SAF F + +P++YL +R+ AR +I Sbjct: 220 ADVRASWTVAELAGIAGMSRSAFSARFLEMVGCAPIEYLARWRMALARDSLIRGVKSLDH 279 Query: 281 AAMRVGYESASQFSREFKRYFGVTPG 306 A +GYESAS FS F+R G+ PG Sbjct: 280 IADEIGYESASAFSTAFRRRMGIAPG 305 >UniRef50_Q7NUP3 Probable transcriptional regulator n=1 Tax=Chromobacterium violaceum RepID=Q7NUP3_CHRVO Length = 236 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 57/105 (54%) Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 F L SR+ + ++ + L+V +A ++S S FH K+ T +P+ YL R+ +AR Sbjct: 130 FRLSSRLDRFLDGRLARPLAVADMAEACHLSSSQFHARLKAETGLTPMAYLCRMRMERAR 189 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 ++ A++VGY+SAS F +++ FG +P E R+R Sbjct: 190 ALLRDSRASVLDVALQVGYQSASAFGAAYRQRFGASPSEGRGRVR 234 >UniRef50_UPI0001AF4439 helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF4439 Length = 182 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%) Query: 229 VEQLAAEANMSVSAFHHNFKSVTSTSPL--QYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 ++QL + + + + + +PL QY K RL +AR ++I++G+ S+A RVG Sbjct: 93 IDQLLLDTVLRLVRLLDTPRDIGMLAPLALQYQKQLRLQEARWLMINEGLDVSSACYRVG 152 Query: 287 YESASQFSREFKRYFGVTPGEDAARMRAM 315 ES QFSRE+ R FG P D +R+R + Sbjct: 153 SESPLQFSREYSRQFGCPPSTDLSRVRQI 181 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%) Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H ++R + I+ Y ENL++++LA A +S F F SP +L YR+ KA Sbjct: 171 HVQAVNRAREYIKTHYAENLTLKELAGVACLSPFYFQRLFLENVGISPHDFLIQYRIKKA 230 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 R M + G + AA+ VG+ S F+R FKR G++PG Sbjct: 231 REM-LDQGSSLADAALDVGFTDQSHFTRAFKRVTGISPG 268 >UniRef50_A8UJN9 Sensor protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UJN9_9FLAO Length = 1397 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%) Query: 211 LISRVLKRIENKYTE-NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 I +VL I + NL+VE LA++ N+S S F+ K++T+ + ++++N RL KA+ Sbjct: 1292 FIEKVLSFINESIGDPNLNVESLASQLNLSRSQFYRKIKALTNQTANEFIRNIRLIKAKQ 1351 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 +I S +VG+ S S F++ FK +FG+ P E Sbjct: 1352 LIESGNNNISEVCYKVGFSSPSYFTKCFKSHFGILPKE 1389 >UniRef50_Q2SMH5 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMH5_HAHCH Length = 292 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 1/93 (1%) Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 +VL+ I+ + E+LS+E+LA A +S F FK + +P QYL+ R++ A+ ++ Sbjct: 192 KVLEYIQAHFGEDLSLERLALVAGLSPFHFARMFKVTMAEAPHQYLRRLRINAAKE-LLG 250 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 GM S AA+ G+ + S F+R FK+ GVTPG Sbjct: 251 KGMDLSEAALICGFANQSHFTRAFKQVAGVTPG 283 >UniRef50_A7MMI8 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MMI8_ENTS8 Length = 314 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 12/188 (6%) Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER-LLDVMERPLDA---RILGKQII- 183 ELLM++G E P A + A L EIL +R + + E LD R G+ ++ Sbjct: 108 ELLMNVGHCEFDTPDRA---LIVALLPNEILIKGQRRFVTLFELLLDESRNRRPGRDVVM 164 Query: 184 ----REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 + +L L A A + R I+ L I +K + + LA E MS Sbjct: 165 THLLQLLLVESLRSDPELAKTAGILRGLQHEKIATALHLIHDKPGADWQIAHLARECAMS 224 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 SAF F SP+QYL +R+ AR + A+R GY+SAS FS F + Sbjct: 225 RSAFFATFSETVGMSPMQYLLFWRMSLARKALTSGQDNIEQIALRTGYQSASAFSVAFTK 284 Query: 300 YFGVTPGE 307 + G+ PGE Sbjct: 285 HAGMPPGE 292 >UniRef50_A8LA37 Transcriptional regulator, AraC family n=1 Tax=Frankia sp. EAN1pec RepID=A8LA37_FRASN Length = 214 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 46/95 (48%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 IS L + SVE LA EA +S +AF F ++ PL YL +R+ A ++ Sbjct: 105 ISTALHHVHRHPGRPWSVEDLAREAGLSRAAFAKRFATIVGQPPLAYLTWWRMTTAARLL 164 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 SA A R GY S F++ FKR FG PG Sbjct: 165 RESKAPLSAVAERCGYRSEFAFAKAFKREFGAAPG 199 >UniRef50_C6D1W6 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D1W6_PAESJ Length = 264 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 55/96 (57%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +S+V++ + + E LS+ +LAA +S S H FKS T S + L N RL +A +++ Sbjct: 156 VSQVMRILSAQMQEPLSINELAARVGLSASRLSHLFKSETGRSIVDTLNNMRLEQAVLLM 215 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + G A A+ VG++S + F+ F+R +G P E Sbjct: 216 LQAGRTAGEASFDVGFQSYNHFAALFRRRYGCGPAE 251 >UniRef50_A1KC76 Putative AraC family transcriptional regulator n=1 Tax=Azoarcus sp. BH72 RepID=A1KC76_AZOSB Length = 345 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 53/102 (51%) Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 SRQ +LI+ I + Y V + A + + +F F+ T SP++Y+ R Sbjct: 224 SRQAEDALIADCQAWIADNYQRPTPVAAMVARSGLPERSFKRRFQLATGMSPMEYVHTLR 283 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 L +A+ M+ + A A+ +GYE AS F+R F+R G+TP Sbjct: 284 LEEAKQMLEASTLAVEAVALELGYEDASFFNRLFRREVGLTP 325 >UniRef50_B5ZZ22 Transcriptional regulator, AraC family n=5 Tax=Rhizobiales RepID=B5ZZ22_RHILW Length = 329 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 6/132 (4%) Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 A +L ++IR + +G LA + R H I RVL + N ++E LA Sbjct: 188 ADLLAARLIR--CWVNCSGASTTGWLAAI-RDPH---IGRVLAAMHRDPGHNWTLESLAG 241 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A S S F F ++ YL R+ AR ++ GM + A R+GYES + F+ Sbjct: 242 VAGQSRSIFAERFSAILGEGAAHYLVRLRMQLARDLLGQSGMSIAEVASRLGYESEASFA 301 Query: 295 REFKRYFGVTPG 306 R FKR V+PG Sbjct: 302 RAFKRVTNVSPG 313 >UniRef50_Q2CGL8 Transcriptional regulator, AraC family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGL8_9RHOB Length = 253 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 15/179 (8%) Query: 137 DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 +E F P A I L IL ER++D +E L A G Q++ + Sbjct: 72 EEDFFPEAVAQAIKEDDL--RILGHGERIVDRVE--LIANEHG-QLVWASTSKLPIQNGA 126 Query: 197 GALLALVSRQT----------HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 G +L LV F V+++IE +V +LAA ANMS S F + Sbjct: 127 GDVLGLVGLTQLLDVNTELPPRFEKFRDVIRKIEAALETPPTVPELAAMANMSESHFRRS 186 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FK V +P +++ RL +A ++ + A+ G+ S FSR+F+R+FG +P Sbjct: 187 FKQVFGVAPQEFILQQRLRQAATLLTRTNRSIAQVALTCGFGDQSHFSRQFRRFFGESP 245 >UniRef50_A2SEH8 Transcriptional regulator, AraC family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SEH8_METPP Length = 337 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 48/92 (52%) Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 LK + + ++ SVE+LA +S + F+ P+QYL ++RL A + Sbjct: 237 ALKLLHDAPLQDWSVERLARAVGVSRTVLAERFRHYLDQPPMQYLAHWRLQLAAQQLKTG 296 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 A RVGYES + FSR FKR+FG+ PG Sbjct: 297 DQPLKTIADRVGYESEAAFSRAFKRHFGLPPG 328 >UniRef50_B0NUV9 Sensor protein n=3 Tax=Bacteroides RepID=B0NUV9_BACSE Length = 1473 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Query: 211 LISRVLKRIENKYTE-NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 + +V+K IE NL VE +A E NMS S F K++T SP+++LK R+ +A Sbjct: 1366 FMDKVMKTIEKHLDNGNLMVEDIANEVNMSRSVFFKKLKTLTGLSPVEFLKEIRMKRAAQ 1425 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 +I D + A VG + FS+ FK+ +G+TP E Sbjct: 1426 LIETDEYSMAQIAYMVGLNDSHYFSKCFKQQYGITPTE 1463 >UniRef50_B5JMW9 Transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMW9_9BACT Length = 224 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 45/87 (51%) Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 IE +Y E L VE LA EA SV+ H FK+ ++P Q + RL AR ++ G Sbjct: 128 IETRYAEPLKVESLAKEAGWSVAHLHDQFKTAYGSTPRQMILERRLSSAREQLVGTGYSI 187 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTP 305 A G+ +S F F++ FGVTP Sbjct: 188 KEIAANTGFTHSSAFCSAFRKAFGVTP 214 >UniRef50_UPI0001788EF7 two component transcriptional regulator, AraC family n=2 Tax=Bacillales RepID=UPI0001788EF7 Length = 516 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 4/104 (3%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +S +++++++ Y E LS++ L+ M + F+ S YL YR+ KA ++ Sbjct: 414 VSFLVEQVQHHYPEELSLKTLSQRLQMHPNYLGQLFQQEVGASFSDYLNQYRIEKATQLL 473 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +H K + A VGY +S F R+FK+Y GV+P E MR+M Sbjct: 474 LHTDQKTADIAFSVGYTDSSYFYRQFKKYTGVSPTE----MRSM 513 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 7/145 (4%) Query: 164 RLLDVMERP-LDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENK 222 ++LD+ P A+ K + +L + T CG Q + LI + I Sbjct: 128 QILDIQSIPGAAAKFQTKVLFLSLLQEIFTAACG------QPGQENSKLIEEAMGYIRLN 181 Query: 223 YTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAA 282 Y + L+V+++A E ++ F + FK T SP+ YL R+ KA+ ++ G A Sbjct: 182 YADELTVQKVADEFSVERRQFSYLFKRHTGMSPIHYLIECRISKAKELLGSPGCSVKQVA 241 Query: 283 MRVGYESASQFSREFKRYFGVTPGE 307 VGY + FS+ FK+Y GV+P E Sbjct: 242 EWVGYTDSLYFSKAFKKYTGVSPSE 266 >UniRef50_Q5QTS9 Predicted regulatory protein containing AraC-type DNA-binding domain and DSBH domain n=1 Tax=Idiomarina loihiensis RepID=Q5QTS9_IDILO Length = 307 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 5/111 (4%) Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 G L AL RQ + V+ + N+ + +VE+LA A +SVSAF T +P Sbjct: 195 GPLAALSDRQ-----LRTVIMAVINEPGADWTVERLAELAYLSVSAFAERCIKKTGVTPK 249 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + + RL +AR+M+ + A ++GY+SA+ FSR FK+Y G++P E Sbjct: 250 KLVDQLRLQRARIMLSSSQLSMDLIAEQLGYQSATAFSRFFKKYAGLSPAE 300 >UniRef50_Q3A690 Transcriptional regulator, AraC family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A690_PELCD Length = 305 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 43/78 (55%) Query: 229 VEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYE 288 +EQLAA ++ + F+ + TS +NYRL AR ++ D + + AAM VGY Sbjct: 211 LEQLAARVGLNATKLKRGFRHLFGTSVFDCFRNYRLETARRILEQDQVSVTEAAMTVGYS 270 Query: 289 SASQFSREFKRYFGVTPG 306 + F FK+ FGV+PG Sbjct: 271 NVGHFCAAFKKQFGVSPG 288 >UniRef50_D0C8I5 Transcriptional regulator n=2 Tax=Acinetobacter RepID=D0C8I5_ACIBA Length = 295 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 52/94 (55%) Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 IS+ L + + T+ +VE LA E N S S F NF + T+P+ YLK++R+ A+ + Sbjct: 191 ISKALFLMHSNPTKEWTVEILAKETNQSKSKFSKNFIQLVGTTPINYLKHWRMKLAKQYL 250 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 + S A VGY S + F+R F + FG +P Sbjct: 251 METNKSISQIADLVGYSSPAAFTRSFIQTFGYSP 284 >UniRef50_C1AVG9 Putative AraC family transcriptional regulator n=1 Tax=Rhodococcus opacus B4 RepID=C1AVG9_RHOOB Length = 326 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 62/105 (59%), Gaps = 2/105 (1%) Query: 204 SRQTHFSLISRVLKRIENK-YTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 ++Q H + + R ++ + + ENLS+ + AAE +S+ F+S ST P ++L + Sbjct: 219 TQQAHTADLHRAQNLLKTRLHDENLSITEAAAELGISLRYLQKIFQSTGST-PSEWLLHA 277 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 RL +ARM+++ + A RVG++ S FSR F+ +G++PG+ Sbjct: 278 RLERARMILLSTDITIGDLASRVGFKDISHFSRSFRTLYGISPGQ 322 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulat... 454 e-126 UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=... 371 e-101 UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=P... 350 3e-95 UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=P... 350 3e-95 UniRef50_Q1H3T0 Transcriptional regulator, AraC family n=27 Tax=... 339 7e-92 UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=P... 338 1e-91 UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteoba... 329 8e-89 UniRef50_B3E2X9 Transcriptional regulator, AraC family n=7 Tax=B... 323 5e-87 UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein ... 322 9e-87 UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=... 322 1e-86 UniRef50_Q3A5M5 Transcriptional regulator, AraC family n=4 Tax=D... 319 9e-86 UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=... 319 1e-85 UniRef50_Q7CW43 Transcriptional regulator, AraC family n=7 Tax=P... 315 9e-85 UniRef50_A9I0Y6 Transcriptional regulator, AraC family n=72 Tax=... 314 3e-84 UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein ... 314 3e-84 UniRef50_C4XTV7 AraC family transcriptional regulator n=5 Tax=Ba... 313 5e-84 UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D... 311 2e-83 UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] bra... 311 2e-83 UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria... 309 7e-83 UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=G... 309 9e-83 UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n... 309 1e-82 UniRef50_A6W3U1 AraC-type transcriptional regulator domain prote... 308 1e-82 UniRef50_Q1QZB6 Transcriptional regulator, AraC family n=10 Tax=... 308 2e-82 UniRef50_C9Y4C2 Uncharacterized HTH-type transcriptional regulat... 307 4e-82 UniRef50_D2C3B7 Transcriptional regulator, AraC family n=2 Tax=E... 305 9e-82 UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=B... 305 9e-82 UniRef50_B4X416 AraC-type transcriptional regulator N-terminus d... 305 1e-81 UniRef50_UPI0001744B11 AraC-type transcriptional regulator domai... 302 7e-81 UniRef50_C6D8S3 Transcriptional regulator, AraC family n=1 Tax=P... 302 1e-80 UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter fo... 302 2e-80 UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n... 301 2e-80 UniRef50_D2L3Y8 Transcriptional regulator, AraC family n=1 Tax=D... 301 2e-80 UniRef50_A6M087 AraC-type transcriptional regulator domain prote... 301 2e-80 UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria... 300 5e-80 UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=C... 299 7e-80 UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=V... 298 1e-79 UniRef50_A9HQ74 Putative transcriptional regulator, AraC family ... 298 2e-79 UniRef50_Q1QSH7 Transcriptional regulator, AraC family n=2 Tax=G... 298 2e-79 UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=A... 297 3e-79 UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=T... 297 3e-79 UniRef50_Q88K66 Transcriptional regulator, AraC family n=4 Tax=P... 296 5e-79 UniRef50_B2KD36 Transcriptional regulator, AraC family n=1 Tax=E... 296 5e-79 UniRef50_A9IS89 Transcriptional regulator, AraC family n=13 Tax=... 296 6e-79 UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=A... 295 1e-78 UniRef50_Q15PL3 Transcriptional regulator, AraC family n=3 Tax=A... 295 1e-78 UniRef50_A9WCQ6 AraC-type transcriptional regulator domain prote... 295 2e-78 UniRef50_Q30WL5 Transcriptional regulator, AraC family n=1 Tax=D... 295 2e-78 UniRef50_B9Z2E6 Transcriptional regulator, AraC family n=1 Tax=L... 294 2e-78 UniRef50_Q396P4 Transcriptional regulator, AraC family n=1 Tax=B... 294 4e-78 UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein ... 293 6e-78 UniRef50_C3KMN9 Transcriptional regulator, AraC family n=1 Tax=R... 292 9e-78 UniRef50_A6W3U9 AraC-type transcriptional regulator domain prote... 292 1e-77 UniRef50_C9P783 AraC-type DNA-binding domain-containing protein ... 292 1e-77 UniRef50_B0KFF0 Transcriptional regulator, AraC family n=8 Tax=P... 291 2e-77 UniRef50_Q5E474 Predicted DNA-binding transcriptional regulator ... 291 2e-77 UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Prote... 290 5e-77 UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=P... 289 8e-77 UniRef50_C3MHY3 Putative transcriptional regulator, AraC family ... 289 9e-77 UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=H... 289 1e-76 UniRef50_B0SVQ8 Transcriptional regulator, AraC family n=8 Tax=c... 288 1e-76 UniRef50_Q021U2 Transcriptional regulator, AraC family n=1 Tax=C... 288 2e-76 UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Gr... 288 2e-76 UniRef50_A6UG08 AraC-type transcriptional regulator domain prote... 288 2e-76 UniRef50_Q1ZUN2 AraC-family trancriptional regulator n=2 Tax=Pho... 287 2e-76 UniRef50_Q4ZQJ7 Helix-turn-helix, AraC type:AraC-type transcript... 287 3e-76 UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n... 287 3e-76 UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=P... 287 3e-76 UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus d... 287 4e-76 UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n... 286 6e-76 UniRef50_B1X2S3 Transcriptional Regulator, AraC family n=3 Tax=C... 286 6e-76 UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=P... 286 6e-76 UniRef50_C0N265 AraC-type transcriptional regulator N-terminus d... 286 7e-76 UniRef50_C8SHN4 Transcriptional regulator, AraC family n=2 Tax=M... 286 9e-76 UniRef50_C6D3S9 Transcriptional regulator, AraC family n=1 Tax=P... 285 1e-75 UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens ... 284 2e-75 UniRef50_Q15TL4 Transcriptional regulator, AraC family n=1 Tax=P... 284 3e-75 UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteo... 284 3e-75 UniRef50_B1K2F3 Transcriptional regulator, AraC family n=7 Tax=P... 282 1e-74 UniRef50_A3M8D5 Transcriptional regulator AraC family n=10 Tax=A... 282 1e-74 UniRef50_Q089X8 Transcriptional regulator, AraC family n=4 Tax=P... 281 2e-74 UniRef50_A8APL9 Putative uncharacterized protein n=1 Tax=Citroba... 281 2e-74 UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=S... 278 1e-73 UniRef50_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=P... 278 2e-73 UniRef50_A6FZ93 Transcriptional regulator, AraC family protein n... 278 2e-73 UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=D... 277 3e-73 UniRef50_A9GMF7 Transcriptional regulator, AraC family n=2 Tax=P... 276 6e-73 UniRef50_Q2S734 AraC-type DNA-binding domain-containing protein ... 275 1e-72 UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=P... 275 1e-72 UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=G... 275 2e-72 UniRef50_Q021L8 Transcriptional regulator, AraC family n=1 Tax=C... 274 2e-72 UniRef50_B2IB97 Transcriptional regulator, AraC family n=5 Tax=R... 274 3e-72 UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfo... 273 6e-72 UniRef50_A3YHM2 Putative transcriptional regulator n=1 Tax=Marin... 273 7e-72 UniRef50_A3QEE9 Transcriptional regulator, AraC family n=1 Tax=S... 272 1e-71 UniRef50_Q65QP8 AraC protein n=7 Tax=Pasteurellaceae RepID=Q65QP... 271 2e-71 UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiom... 271 3e-71 UniRef50_A6WBM1 AraC-type transcriptional regulator domain prote... 270 5e-71 UniRef50_C6ARF9 Transcriptional regulator, AraC family n=4 Tax=P... 270 5e-71 UniRef50_B0C5B1 Transcriptional regulator, AraC family n=1 Tax=A... 270 7e-71 UniRef50_B8DSD0 Transcriptional regulator, AraC family n=1 Tax=D... 269 7e-71 UniRef50_C9PHT7 Transcriptional regulator AraC family n=2 Tax=Ga... 269 8e-71 UniRef50_Q0SK59 Transcriptional regulator, AraC family protein n... 267 3e-70 UniRef50_A7HDG1 AraC-type transcriptional regulator domain prote... 267 3e-70 UniRef50_B0T5I6 Transcriptional regulator, AraC family n=1 Tax=C... 266 6e-70 UniRef50_A0RQF6 Transcriptional regulator, AraC family n=1 Tax=C... 266 9e-70 UniRef50_B0S9N6 Transcription regulator n=2 Tax=Leptospira bifle... 265 1e-69 UniRef50_Q65QM2 AraC protein n=1 Tax=Mannheimia succiniciproduce... 265 1e-69 UniRef50_B4Y346 Putative AraC family transcriptional regulator n... 265 2e-69 UniRef50_C6ARF6 Transcriptional regulator, AraC family n=12 Tax=... 263 5e-69 UniRef50_UPI000197C8CE AraC family transcription regulator n=1 T... 261 3e-68 UniRef50_Q1GMB4 Transcriptional regulator, AraC family n=3 Tax=R... 261 3e-68 UniRef50_A9D252 Transcriptional regulator, AraC family protein n... 260 4e-68 UniRef50_Q1MYY9 AraC-family trancriptional regulator n=1 Tax=Ber... 260 5e-68 UniRef50_A4BKJ5 Probable transcriptional regulator n=1 Tax=Reine... 255 2e-66 UniRef50_Q6FB96 Putative transcription regulator (AraC family) n... 253 6e-66 UniRef50_C1TR85 Transcriptional regulator, AraC family n=1 Tax=D... 253 6e-66 UniRef50_A9AC46 AraC family transcriptional regulator n=1 Tax=Bu... 253 8e-66 UniRef50_B6R5M8 AraC-family trancriptional regulator n=1 Tax=Pse... 251 2e-65 UniRef50_B5J4U5 Transcriptional regulator, AraC family protein n... 250 3e-65 UniRef50_B1KC45 Transcriptional regulator, AraC family n=17 Tax=... 250 4e-65 UniRef50_A9HXN5 Transcriptional regulator, AraC family n=9 Tax=P... 248 2e-64 UniRef50_A6LZC1 AraC-type transcriptional regulator domain prote... 247 3e-64 UniRef50_A7GXA4 Transcriptional regulator, AraC family n=2 Tax=C... 247 4e-64 UniRef50_Q15RK2 Transcriptional regulator, AraC family n=8 Tax=P... 246 6e-64 UniRef50_D0LTL2 Transcriptional regulator, AraC family n=1 Tax=H... 244 3e-63 UniRef50_Q1J2Q3 Transcriptional regulator, AraC family n=1 Tax=D... 244 3e-63 UniRef50_A9G5E9 Transcriptional regulator, AraC family n=1 Tax=S... 244 4e-63 UniRef50_B9JLS7 Transcriptional regulator protein n=1 Tax=Agroba... 243 7e-63 UniRef50_D0DBP1 AraC-type transcriptional regulator domain prote... 243 8e-63 UniRef50_Q82GC0 Putative AraC-family transcriptional regulator n... 243 8e-63 UniRef50_A9FZJ5 Transcriptional regulator, AraC family n=1 Tax=S... 242 2e-62 UniRef50_C5CNC1 Transcriptional regulator, AraC family n=1 Tax=V... 241 3e-62 UniRef50_UPI00016AE94B transcriptional regulator, AraC family pr... 238 3e-61 UniRef50_A7JPV4 AraC family transcriptional regulator n=2 Tax=Ma... 237 3e-61 UniRef50_C0A3K5 AraC family transcriptional regulator n=1 Tax=Op... 236 9e-61 UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 ... 228 2e-58 UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=B... 226 7e-58 UniRef50_C7DDR7 Transcriptional regulator, AraC family n=2 Tax=R... 217 4e-55 UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 T... 212 1e-53 UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein ... 194 4e-48 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 192 1e-47 UniRef50_Q2NVE4 Putative transcriptional regulator n=1 Tax=Sodal... 190 4e-47 UniRef50_A6ES38 AraC-type DNA-binding domain-containing protein ... 183 9e-45 UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=C... 173 8e-42 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 173 9e-42 UniRef50_D2QFH9 Transcriptional regulator, AraC family n=1 Tax=S... 172 2e-41 UniRef50_Q3ADL3 Transcriptional regulator, AraC family n=1 Tax=C... 172 2e-41 UniRef50_Q099H5 Helix-turn-helix, AraC type:AraC-type transcript... 168 3e-40 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 161 4e-38 UniRef50_C6IPT3 Transcriptional regulator n=3 Tax=Bacteroides Re... 158 2e-37 UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=... 156 9e-37 UniRef50_Q3ID67 Putative transcriptional regulator (AraC/XylS fa... 156 1e-36 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 153 1e-35 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 151 4e-35 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 150 5e-35 UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=D... 149 8e-35 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 149 9e-35 UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus R... 149 1e-34 UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=C... 148 2e-34 UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=D... 148 4e-34 UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=G... 147 4e-34 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 146 1e-33 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 146 1e-33 UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Ther... 145 2e-33 UniRef50_A1ZXA6 Probable transcriptional regulatory protein, put... 145 2e-33 UniRef50_UPI0001692E87 YbbB n=1 Tax=Paenibacillus larvae subsp. ... 144 3e-33 UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostri... 144 4e-33 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 144 4e-33 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 144 5e-33 UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=C... 144 5e-33 UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=G... 144 5e-33 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 143 6e-33 UniRef50_A8ZMX0 Transcriptional regulator, AraC family n=1 Tax=A... 142 2e-32 UniRef50_C9XTT1 Putative uncharacterized protein n=1 Tax=Cronoba... 142 2e-32 UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=E... 141 2e-32 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 141 3e-32 UniRef50_A3IBD0 Putative uncharacterized protein n=1 Tax=Bacillu... 141 4e-32 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 141 4e-32 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 140 5e-32 UniRef50_A7MMI8 Putative uncharacterized protein n=1 Tax=Cronoba... 140 5e-32 UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=G... 140 6e-32 UniRef50_A9U6B0 Predicted protein n=1 Tax=Physcomitrella patens ... 140 7e-32 UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1... 140 7e-32 UniRef50_A9KJM4 Two component transcriptional regulator, AraC fa... 140 7e-32 UniRef50_Q5WDQ8 AraC/XylS family transcriptional regulator n=1 T... 140 8e-32 UniRef50_A8LUG5 Transcriptional regulator, AraC family n=8 Tax=B... 139 9e-32 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 139 9e-32 UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=... 139 1e-31 UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus R... 139 1e-31 UniRef50_C1F8R2 Transcriptional regulator, AraC family n=1 Tax=A... 139 2e-31 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 139 2e-31 UniRef50_UPI00017895AE two component transcriptional regulator, ... 139 2e-31 UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=F... 138 2e-31 UniRef50_Q21KB5 Transcriptional regulator, AraC family with amid... 138 2e-31 UniRef50_C1I3A1 Response regulator receiver protein n=1 Tax=Clos... 138 2e-31 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 138 2e-31 UniRef50_UPI0001C36195 two component transcriptional regulator, ... 138 2e-31 UniRef50_B0UI49 Transcriptional regulator, AraC family n=3 Tax=R... 138 3e-31 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 138 3e-31 Sequences not found previously or not previously below threshold: UniRef50_A5FFR2 Transcriptional regulator, AraC family n=3 Tax=B... 170 6e-41 UniRef50_C6VUN3 Transcriptional regulator, AraC family n=1 Tax=D... 166 7e-40 UniRef50_A3HZK9 AraC-type DNA-binding domain-containing protein ... 163 9e-39 UniRef50_Q1QTE9 Transcriptional regulator, AraC family n=1 Tax=C... 162 1e-38 UniRef50_Q0TTY3 Transcriptional regulator, AraC family n=8 Tax=C... 162 2e-38 UniRef50_B9JQ27 Helix-turn-helix, AraC type n=1 Tax=Agrobacteriu... 161 2e-38 UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacte... 161 3e-38 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 157 4e-37 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 155 2e-36 UniRef50_C7PFA7 Transcriptional regulator, AraC family n=1 Tax=C... 152 2e-35 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 150 6e-35 UniRef50_C0YPK7 AraC-type DNA-binding domain-containing protein ... 149 9e-35 UniRef50_A6FIS9 Putative transcriptional regulator (AraC/XylS fa... 148 2e-34 UniRef50_Q2SKY5 AraC-type DNA-binding domain-containing protein ... 148 2e-34 UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=B... 148 3e-34 UniRef50_C9RVZ3 Two component transcriptional regulator, AraC fa... 147 6e-34 UniRef50_A6EQ46 Putative transcriptional regulator (AraC/XylS fa... 147 6e-34 UniRef50_Q2S2I5 Transcriptional regulator, putative n=1 Tax=Sali... 146 1e-33 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 146 1e-33 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 146 1e-33 UniRef50_A6W0F8 Helix-turn-helix-domain containing protein AraC ... 145 2e-33 UniRef50_A1B409 Transcriptional regulator, AraC family n=5 Tax=A... 143 9e-33 UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumil... 143 1e-32 UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=S... 142 1e-32 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 142 1e-32 UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=... 142 2e-32 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 142 2e-32 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 142 2e-32 UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=C... 142 2e-32 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 142 2e-32 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 141 2e-32 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 141 3e-32 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 140 5e-32 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 140 6e-32 UniRef50_Q6FB91 Putative transcriptional regulator (AraC family)... 140 6e-32 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 140 7e-32 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 140 7e-32 UniRef50_A6CZX1 Transcriptional regulator, AraC family protein n... 140 8e-32 UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=C... 139 8e-32 UniRef50_C5D8H7 Two component transcriptional regulator, AraC fa... 139 9e-32 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 139 1e-31 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 139 1e-31 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 139 1e-31 UniRef50_A4CDX9 AraC-type DNA-binding domain-containing protein ... 139 1e-31 UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC ... 139 2e-31 UniRef50_C6LLK3 Putative two-component response regulator n=1 Ta... 139 2e-31 UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostri... 139 2e-31 UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=P... 138 2e-31 UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=... 138 2e-31 UniRef50_A3YD69 Putative transcriptional regulator (AraC/XylS fa... 138 2e-31 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 138 3e-31 >UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulator yqhC n=112 Tax=Bacteria RepID=YQHC_ECOLI Length = 318 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 318/318 (100%), Positives = 318/318 (100%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA Sbjct: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL Sbjct: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 Query: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK Sbjct: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV Sbjct: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY Sbjct: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 Query: 301 FGVTPGEDAARMRAMQGN 318 FGVTPGEDAARMRAMQGN Sbjct: 301 FGVTPGEDAARMRAMQGN 318 >UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=Gammaproteobacteria RepID=A4THW4_YERPP Length = 297 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 176/290 (60%), Positives = 225/290 (77%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 +I +ADK+ +L + + V++LY RTPVMY P ++I+F GHK+GY+ Sbjct: 6 DIQAQMADKIARLAQGDGLTPSTVSGVKILYSTVHQPRTPVMYTPSVVIIFQGHKVGYLG 65 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 +VF+YD YL+L+VPLPFECET+A+ E+PLAG+ + VD LQ+L+M +G+DE +P Sbjct: 66 SKVFQYDPKNYLILSVPLPFECETFASPEIPLAGISIQVDSQMLQDLMMTMGDDELEKPP 125 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 SG+NSA L+EE+LCA ERLLDVM DAR+LG QI+REILYYVL G CGGAL ALV Sbjct: 126 GNTSGVNSAPLTEEMLCATERLLDVMSIARDARVLGPQIVREILYYVLCGSCGGALQALV 185 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 +R HF+ I++ L+RIEN + +NLSVEQLAAE NMSVSAFHHNFK+VT+TSPLQYLK+YR Sbjct: 186 NRHGHFNQITKTLRRIENHFADNLSVEQLAAEVNMSVSAFHHNFKAVTNTSPLQYLKSYR 245 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LH+ARMM++HDG+KAS AA++VGYESASQFSREFKRYFG TP E A+ R Sbjct: 246 LHRARMMMLHDGLKASTAAIKVGYESASQFSREFKRYFGHTPSEGVAKQR 295 >UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=Pectobacterium carotovorum RepID=C6DIU8_PECCP Length = 329 Score = 350 bits (899), Expect = 3e-95, Method: Composition-based stats. Identities = 168/295 (56%), Positives = 224/295 (75%), Gaps = 1/295 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 ++ + + + + + K + L+P V++LY E R PVMYEP I+I+F G KIG Sbjct: 27 SQQTVRQRIVRQAIRCSTKNWATPSLVPQVKILYTEQHHPRVPVMYEPTIVIIFQGQKIG 86 Query: 81 YINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 Y+ + F+YD YLL+TVPLPFECET A++E PL G+ + +DI LQ+LL+DIG+D+ Sbjct: 87 YVGGKTFQYDPENYLLMTVPLPFECETIASAEHPLVGMAIRIDIQMLQDLLIDIGDDDSA 146 Query: 141 -QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 +P G+NSA L++EILCA ERLLD M+ P DAR+LG I+REI+Y++L G G AL Sbjct: 147 VRPCSCTCGVNSAPLTDEILCAVERLLDAMDNPRDARVLGPTIVREIIYHMLCGERGAAL 206 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 ALV+R THFS I++ L+RIEN Y +NL+VEQLAAE NMS+SAFHHNFK+VT+TSPLQYL Sbjct: 207 QALVNRHTHFSQIAKSLRRIENHYADNLNVEQLAAEVNMSISAFHHNFKAVTNTSPLQYL 266 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K+YRLHKAR+M+I++G++A AA RVGYES SQFSREFKRYFG TP ++AAR++A Sbjct: 267 KSYRLHKARVMMINEGLRAGVAAARVGYESVSQFSREFKRYFGATPSDEAARLKA 321 >UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=Pectobacterium RepID=D0KFC4_PECWW Length = 346 Score = 350 bits (899), Expect = 3e-95, Method: Composition-based stats. Identities = 170/313 (54%), Positives = 229/313 (73%), Gaps = 5/313 (1%) Query: 7 QSNC-RIIPKKLRDMK---REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART 62 +S C R++ K++ + ++ + + + + K L+P VR+LY E R Sbjct: 26 ESQCERLVQKQIIQKQTEQQQAARQRIVQQAIRCSTKSWVTPSLVPQVRILYTEQHHPRV 85 Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 PVMY+P I+I+ G KIGY+ + F YD YLL+TVPLPFECET A+ E PL G+ +++ Sbjct: 86 PVMYDPTIVIILQGKKIGYLGGKTFLYDPENYLLMTVPLPFECETIASVENPLVGIAISI 145 Query: 123 DILQLQELLMDIGEDE-HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 DI LQ+LL+DIG+D+ +P G+NSA L++EILCA ERLLD M P DAR+LG Sbjct: 146 DIPMLQDLLIDIGDDDSAIRPCSCTCGVNSAPLNDEILCAVERLLDTMNNPRDARVLGPT 205 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 I+REI+Y++L G G AL ALV+R THFS I++ L+RI+N Y ++L+VEQLAAE NMSVS Sbjct: 206 IVREIIYHMLCGERGAALQALVNRHTHFSQITKALRRIKNHYADSLNVEQLAAEVNMSVS 265 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 AFHHNFK+VT+TSPLQYLK+YRLHKAR+M+++DG++A AA RVGYESASQFSREFKRYF Sbjct: 266 AFHHNFKAVTNTSPLQYLKSYRLHKARVMMLNDGLRAGVAAARVGYESASQFSREFKRYF 325 Query: 302 GVTPGEDAARMRA 314 G TPG++ R++A Sbjct: 326 GATPGDEVTRLKA 338 >UniRef50_Q1H3T0 Transcriptional regulator, AraC family n=27 Tax=cellular organisms RepID=Q1H3T0_METFK Length = 346 Score = 339 bits (871), Expect = 7e-92, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 193/305 (63%), Gaps = 4/305 (1%) Query: 11 RIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 +P D+ R+ +++ + +L E LL VRL+ + P RTPV+YEP I Sbjct: 30 AEMPHTQPDLSRQ---AEMSELIQQLAPHEGHTRSLLDGVRLMRADRPLGRTPVLYEPSI 86 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQEL 130 +I+ GHK GY+ +RV+ YD YL+L+VPLPF ET A+ E PL + + +D+ + +L Sbjct: 87 VIVCQGHKRGYLADRVYHYDPQHYLVLSVPLPFSSETDASPEEPLLAVSVRLDMTAVADL 146 Query: 131 LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 ++++ + P+ A GI S L + RLL + L+AR+LG I+RE+ + V Sbjct: 147 VIEVDQQASPVPAAPA-GIVSTPLDATLADTTVRLLRALRSTLEARVLGPAIVRELCFRV 205 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L G GGA+ A ++ +F I+RVL+RI N Y + L V+ LA EA +SV AFH +FK+V Sbjct: 206 LLGEQGGAIRAALANHGNFGRIARVLRRIHNDYAQPLDVDTLAREAGLSVPAFHAHFKAV 265 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 +TSP+QY+K+ RLH+AR+M+I D + A+ AA RVGYES SQF+REFKR FG +PGE+A Sbjct: 266 AATSPIQYIKSVRLHQARLMMIRDNVTAAGAAARVGYESPSQFNREFKRLFGRSPGEEAR 325 Query: 311 RMRAM 315 MR+ Sbjct: 326 EMRSA 330 >UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=D1UN50_9BURK Length = 379 Score = 338 bits (868), Expect = 1e-91, Method: Composition-based stats. Identities = 138/302 (45%), Positives = 187/302 (61%), Gaps = 1/302 (0%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 + L + + L K+ L V L+ TP R PVMYEP I+I+ Sbjct: 61 SSAPSADAHAAQQRLTEVFDMLAPKQGMTRSSLEGVNLMRANTPMPRMPVMYEPSIVIVC 120 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDI 134 G K GY+ ++VF+YDA +YL+L+VPLPFECET A+ P G+ + VD+ + ELLM + Sbjct: 121 QGRKRGYLGDQVFQYDAQQYLVLSVPLPFECETEASPGEPFLGISIRVDLTMVAELLMAL 180 Query: 135 GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 E + GI S L + A +RLL+ + PLDARIL I+REI Y VLTG Sbjct: 181 NETQGTA-RNEPLGIYSTPLDPALSSAVQRLLEALMSPLDARILAPGIVREICYRVLTGE 239 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G A+ A ++ Q HF I++ L+RI Y L V+ LAAEA MS++ FH FK+VT+TS Sbjct: 240 QGDAIRAALTHQNHFGRIAKALRRIHADYHGALDVDTLAAEAGMSLAVFHAQFKAVTATS 299 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 P+QY+K RLH AR++++ DG+ A AAA RVGYESASQFSREFKR FG++P ++ RMRA Sbjct: 300 PMQYVKTTRLHHARLLMVQDGLNAGAAAARVGYESASQFSREFKRLFGLSPVDEVKRMRA 359 Query: 315 MQ 316 + Sbjct: 360 IY 361 >UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteobacteria RepID=B4EQD3_BURCJ Length = 338 Score = 329 bits (844), Expect = 8e-89, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 158/295 (53%), Gaps = 3/295 (1%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 + E+ R LA++V + + L +P++ E P M EP ++ G K Sbjct: 34 RENELRRTLAERVARWTEGVDHLDTAIPNLSFHRREAPTQPMECMVEPSFGLVVQGAKRV 93 Query: 81 YINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + + YDA+ +L+ ++ LP + A+ + P GL L +D + EL+M + D Sbjct: 94 MQSGDAYIYDADRFLITSLDLPGSTQIIEASPDKPFLGLGLKLDFRVMAELMMQVAPDHD 153 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 P A G+ ++E + A RLL +++ P +LG I REI Y +LT GG L Sbjct: 154 DAP--AGRGLVVGDMTEPLYDALNRLLALLDDPHAIAVLGPYIEREIYYRLLTSDQGGRL 211 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + S + + +SR ++ + Y E+L V+ LAA+ MS S FHH+F+ +T SPLQY Sbjct: 212 RQIASTGSQCNRVSRAIRWLRAHYDESLRVDDLAAQVQMSSSTFHHHFRQLTGMSPLQYQ 271 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RL++AR +++ + + A++AA RVGY S +QF+RE+ R FG +P D +R Sbjct: 272 KWIRLNEARRLMLAERLDAASAAFRVGYASPTQFNREYSRLFGNSPRRDIDSLRG 326 >UniRef50_B3E2X9 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=B3E2X9_GEOLS Length = 314 Score = 323 bits (828), Expect = 5e-87, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 166/295 (56%), Gaps = 2/295 (0%) Query: 25 ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 L + + + + ++P + L P +YEPG+ ++ G K + + Sbjct: 18 AIEELNRSIARWTEQGEMHTTVIPGLALFRRTEPTEPVSGIYEPGVCLIAQGAKRVMLGD 77 Query: 85 RVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 +RYDA YL+ +V LP + A+ E P GLRL D+ ++ +L++D + +P Sbjct: 78 DRYRYDAQHYLITSVHLPTIVQVIEASPEKPYLGLRLTFDLREVSQLMVDSNLPQP-RPQ 136 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 ++ G+ + ++ +++ A RL+D++ D IL I REI+Y +L G G L + Sbjct: 137 QSSRGMATGQVTLQLVNAFIRLIDLLADEKDIPILAPVIQREIIYRLLVGDQGERLRQIA 196 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + + I++ + +++ Y++++S++QLAA+ NMS S FHH+F+S+T+ SPLQY K R Sbjct: 197 TAGSQSQQIAKAIGWLQSNYSQSISMDQLAAQTNMSTSTFHHHFRSLTALSPLQYQKQLR 256 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 L +AR +++ + M A+ AA +VGYES SQF+RE+ R FG P D +R + + Sbjct: 257 LQEARRLMLAERMDAANAAFQVGYESPSQFNREYSRMFGAPPLRDITSLRQLAAD 311 >UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF73_HAHCH Length = 320 Score = 322 bits (827), Expect = 9e-87, Method: Composition-based stats. Identities = 127/281 (45%), Positives = 172/281 (61%), Gaps = 1/281 (0%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L D +N+ + LP+V P R PV+YEP I+I+ G K GY+ E+ + Sbjct: 31 LFVDLLNQHAKQVGVNHTPLPEVTTFRVVKPSPRQPVVYEPAIVIVGQGGKRGYVGEQTY 90 Query: 88 RYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YDA YL+L+VPLPFECE A+ E PL GLR+ VD L L +LL+D+G+ Sbjct: 91 TYDAYNYLVLSVPLPFECEIYEASPESPLLGLRILVDTLALNDLLIDMGDPPSRTSGDIP 150 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 I S L++ ++ A RL+ V+ P +A+ILG QI+REI Y VL G G L A + Sbjct: 151 KSIYSTPLNDTLIEACIRLVKVLSDPAEAKILGPQILREIYYRVLCGDRGETLRAAANHN 210 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + + I++VLK I +Y + L ++ +A ANMS S HHNFK+VT SPLQYLK+ RLH+ Sbjct: 211 SRVAQIAKVLKMIHQQYDQPLDIDTMARAANMSHSTLHHNFKAVTDCSPLQYLKSIRLHQ 270 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 AR ++ G+ AS AAM+VGY S SQFSREFKR FG P + Sbjct: 271 ARNLLARGGINASTAAMKVGYVSPSQFSREFKRLFGAPPRD 311 >UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=Q3A5L7_PELCD Length = 307 Score = 322 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 161/299 (53%), Gaps = 2/299 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 K + L ++ +L + + +P + L P MY+P I ++ G K Sbjct: 7 KTSDALECLLQRIARLTEQGELHTTAIPGLSLFRRTEPTEPVTGMYQPSICLIAQGAKRV 66 Query: 81 YINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + + YDA YL+ +V LP + T A+ E P GLRL D+ ++ +L+ D + Sbjct: 67 KLGDESLVYDAQHYLITSVHLPTVVQITEASPEKPYLGLRLTFDLREVSQLMAD-SQLPP 125 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + ++ G+ + ++ +L A +RL+D++ D IL I REI+Y +L G G L Sbjct: 126 PRTRESSRGMATGEVTRPLLNAFQRLIDLLNEDEDIPILAPVIQREIIYRLLVGDQGARL 185 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + + + I+R ++ ++ +T+ L ++ LA +A+MS S FHH+F+S+T+ SPLQY Sbjct: 186 RQIATAGSQSQQIARAIEWLKGNFTQPLRIDDLAEQASMSTSTFHHHFRSMTALSPLQYQ 245 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 K RL +AR +++ + + A+ A +VGYES SQFSRE+ R FG P D +R + G Sbjct: 246 KQLRLREARRLMLMERLDAATAGFQVGYESPSQFSREYSRLFGAPPLRDITNLRQVAGG 304 >UniRef50_Q3A5M5 Transcriptional regulator, AraC family n=4 Tax=Desulfuromonadales RepID=Q3A5M5_PELCD Length = 314 Score = 319 bits (818), Expect = 9e-86, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 156/297 (52%), Gaps = 2/297 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + E L + + +P + + + P P + EP I ++ G K Sbjct: 13 LTKSEPLTALVADIARWTTGCGEFQTPVPGLTFYHHDQPTEPKPGLTEPSICLIAQGAKR 72 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 ++ + F YDA+ YLL +V LP + A+ P GL L D+ +L L++D Sbjct: 73 IHLEDETFDYDAHRYLLASVYLPTTYQVISASPGEPYLGLVLKFDMRELSRLMIDSNLPA 132 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + +++ ++ +L A +RL+ ++ P D IL + REILY +L G G Sbjct: 133 TRTRDIDRC-MSTGEVTLPLLSAFQRLVALVNEPEDIPILAPMLHREILYRLLVGDQGDR 191 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L + + + ++R ++ ++ + + L +++LA ANMS S+FH +F+++TS SPLQY Sbjct: 192 LRQIAASGSRSHQVARAIEWLKTNFAQQLRIDELAGMANMSASSFHSHFRAMTSLSPLQY 251 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 K+ RL +AR +++ + + A+ AA +VGYES+SQFSRE+ R FG P D +R Sbjct: 252 QKHLRLQEARRLMLAEDLDATRAAFQVGYESSSQFSREYSRLFGAPPLRDVNSLRQA 308 >UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=A4XVM8_PSEMY Length = 315 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 98/301 (32%), Positives = 152/301 (50%), Gaps = 2/301 (0%) Query: 19 DMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 D E+ +A V + + +P ++L +P +Y+P + I+ G K Sbjct: 12 DTPLAELSHEMARLVERFVPDDGLHLTAIPGLKLARATSPSLPMQTVYDPCLCIIAQGRK 71 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGED 137 + + ++ YD YL+ +V LP A+ E P L L +D + LL ++ Sbjct: 72 EIRLGDELYVYDPLNYLVASVMLPVTGRVIEASPEAPYLSLALEIDPALISSLLTEMPPI 131 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 + + + L +L A RLL ++E P D +L +REI Y +L P G Sbjct: 132 -PAPDAASQRALFLDRLDPRLLDAVIRLLRLLETPRDIAMLAPLALREIFYRMLLSPQGH 190 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 L +V + ISR ++ + + + L +E+LA E N+S S HH FK+VT+ SPLQ Sbjct: 191 RLHEVVVADSQSQRISRAIEWLRKNFDQPLRIEELAREVNLSPSTLHHRFKAVTAFSPLQ 250 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 Y K RL +AR +++ D ++A+AA+ RVGYES SQFSRE+ R FG P D AR+R Sbjct: 251 YQKQLRLQEARRLMLCDNLEAAAASYRVGYESPSQFSREYSRLFGAPPQRDIARLRQAAQ 310 Query: 318 N 318 N Sbjct: 311 N 311 >UniRef50_Q7CW43 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q7CW43_AGRT5 Length = 305 Score = 315 bits (809), Expect = 9e-85, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 2/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + + + + + LP ++L+ PV+YEP + ++ G K + + Sbjct: 5 HTIEATIARHAPHDGTFETQLPGLKLIRCSETTLPMPVVYEPTLCLVAQGRKQAVLGQTS 64 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 F YD + YL+ +V LP A+ + P ++L++D ++L +L + ++H P Sbjct: 65 FVYDPSSYLVASVDLPVMGSVIEASKDKPYLSMQLDLDTVELADLAIRYPSEQH-APING 123 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ + E I+ AA RLL +++ P D L REILY ++TG G AL +V Sbjct: 124 PIGLLLNKVDEGIIDAASRLLALLDTPRDIDALSPLAKREILYRLITGVGGAALRQIVQA 183 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 H + I+R + I + E SVE A A MS S FH +FK+VT+ SPL++ RL Sbjct: 184 GAHVNQIARSIVWIRKHFRETCSVEAGAEVAGMSRSTFHAHFKAVTNMSPLEFRTQLRLQ 243 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR +++ +G+ A+ A +VGY S SQFSRE+ R FG++P + A +R Sbjct: 244 EARRLMLSEGLDAATAGFQVGYASPSQFSREYGRVFGMSPAKHANALRQ 292 >UniRef50_A9I0Y6 Transcriptional regulator, AraC family n=72 Tax=Proteobacteria RepID=A9I0Y6_BORPD Length = 349 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 118/292 (40%), Positives = 179/292 (61%), Gaps = 1/292 (0%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + + + + +L E LPD+RLL P PV+Y+PGI+I+ G K GY Sbjct: 42 PALRQRMVALLERLAPCEGYNLTALPDIRLLRSNRPMKNVPVLYDPGIVIVCQGRKRGYF 101 Query: 83 NERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 +++ YD YL + VP+PF ET A++E PL + +++D +L++ I + P Sbjct: 102 GNQLYLYDDQHYLAVAVPVPFTMETDASAEEPLLAVYMHLDFKLAADLMLQIDQLGGTAP 161 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + G+ S L + + RLL+ + PL+A ILG ++REI ++ LTG G ++ A Sbjct: 162 ARP-RGMVSTPLDRRMGESVVRLLEALGEPLEAPILGPALVREIYFHALTGEQGASMRAA 220 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 ++ Q F I+R L+RI + LSVEQLA EA MSV+ FH +FK+VT +SP+QYLK+ Sbjct: 221 LAMQGQFGKIARALRRIHASFHAELSVEQLAREAGMSVATFHTHFKTVTRSSPVQYLKSV 280 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RLH+AR+ ++ +GM A+AA+ VGY+S SQFSREFKR FG +P ++ RM+A Sbjct: 281 RLHQARLHMVRNGMTAAAASAEVGYDSPSQFSREFKRLFGRSPVQEVRRMKA 332 >UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein n=5 Tax=Acinetobacter RepID=B2I1B8_ACIBC Length = 294 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 85/285 (29%), Positives = 151/285 (52%), Gaps = 2/285 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + LA V++ ++ + + + L ET + M + + ++ G K ++E Sbjct: 9 QELAQLVDQWTREKGTFETAITGLTLYRAETLTKPSSSMMDASLCMIAQGKKQVILSEET 68 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + YD+N +L + LP + A+ E P + L +D L +++++ + Sbjct: 69 YTYDSNHFLFTAIDLPVIAQVLEASVEQPYLSIVLRLDPYLLAQIMLE-AHIPFKDVNTE 127 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ ++ E+ A RL+ +++ P D IL II+EI Y +L P G L +V+ Sbjct: 128 KKGMAVGVVNSELNDAFIRLIKLLDTPQDIPILSPLIIKEIFYRLLMSPQGDRLKRIVAA 187 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 T I + ++ ++ + + S+E+LA+ MS S+FH +F+ +TS SPLQY K RL Sbjct: 188 GTTGHRIVKAIEWLKTNFAKPFSIEELASTMGMSASSFHQHFRDITSMSPLQYQKRMRLT 247 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 +AR +++ + S+ +M+VGYES SQFSRE+KR+FGV+P D Sbjct: 248 EARRLLMTEEYDISSTSMQVGYESLSQFSREYKRFFGVSPSVDIK 292 >UniRef50_C4XTV7 AraC family transcriptional regulator n=5 Tax=Bacteria RepID=C4XTV7_DESMR Length = 294 Score = 313 bits (802), Expect = 5e-84, Method: Composition-based stats. Identities = 118/297 (39%), Positives = 167/297 (56%), Gaps = 6/297 (2%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M+ +I LL + L VR P R P++Y PGI I+ GHKI Sbjct: 1 MQMPKIVELLGKFQ---ITDGGATESRLTGVRFFKDTQPVPRRPMLYNPGICIVAQGHKI 57 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 GY+ FRYDA+ YL+ +V +PFECET+A+ + PL GL +++D+ QL +L+ + E Sbjct: 58 GYLGGHTFRYDADNYLVTSVAMPFECETFASQDDPLLGLYIDIDMAQLHDLIGQMALQEE 117 Query: 140 ---FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + GI +T+ E++ A +LL + +A+IL ++REI Y L G Sbjct: 118 VGKLGENDFPLGIGPSTMDEDMRDAVIKLLKALWTETEAKILAPGLVREIYYRALRGTQA 177 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L +L F+ + R +K +++ Y++ L +E LA ANMSVSAFH FK +T SPL Sbjct: 178 PVLYSLARGNGSFAQVGRTIKMMQSNYSKKLEIEDLATTANMSVSAFHKAFKEITCDSPL 237 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 QYLK RL +AR +I+ KA AA VGYES SQFSREFKRYFG +P + +R Sbjct: 238 QYLKKIRLSRARDLIVQQKAKAYMAASEVGYESPSQFSREFKRYFGHSPADLMREVR 294 >UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio RepID=B8DKQ8_DESVM Length = 292 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 115/281 (40%), Positives = 166/281 (59%), Gaps = 3/281 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 +A+ ++KL E LP V L RTP++Y+ G+IIL G K+ + RV++ Sbjct: 4 IAELMSKLAINEGKTETGLPGVGLYRTSGSIHRTPLLYQQGLIILGQGAKLVHFGGRVYQ 63 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGED---EHFQPSMA 145 YD + YL L+VP+ ECE AT E PL L +++D+ L +L+ I + Sbjct: 64 YDQDHYLALSVPIAAECEAVATPEKPLLSLVVDIDLGVLNQLIGQIEDRIDYRSLTQGCT 123 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ A +RLL + PL+A++LG ++RE+L+ VL G AL AL ++ Sbjct: 124 HQGLFLAKADAAFRNTVQRLLLALSCPLEAQVLGPGLVRELLFRVLCGENAAALHALATK 183 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 T+ S I + LK+I ++E +V+QLA NMS S FH FK VT+ SP+QYLK RL+ Sbjct: 184 NTNMSRIEKALKQIHGNFSEPFNVDQLAGFVNMSPSTFHRAFKDVTAFSPIQYLKRVRLN 243 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 KAR ++ DG++AS AA VGYES SQFSREF+RYFG++P Sbjct: 244 KARSLLREDGVRASEAARMVGYESVSQFSREFRRYFGISPS 284 >UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] brachysporum RepID=A8KCK0_9BURK Length = 322 Score = 311 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 93/309 (30%), Positives = 166/309 (53%), Gaps = 4/309 (1%) Query: 3 QNCAQSNCRIIPKKLRDMKREEIC-RLLADKVNKLKNKENSLSGLLPDVRLLYGETPF-A 60 Q+ Q+N +P + ++ + LA +N+ ++ + +P + ++ TP Sbjct: 4 QDQVQTNNAALPSLEVNAVKDNVRVSELARLLNQHAPRKGVGATAIPRLSVIKLSTPSDE 63 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLR 119 ++EP + I+ G K + + V+ YD + +L+ + LP + T AT E P R Sbjct: 64 LVHALHEPAVCIIAQGAKRVMLRDEVYCYDTSRFLVFSTDLPISAQVTDATFERPYLCFR 123 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 L++D ++ EL++ +G + + + G+ + ++ +L AA RLL +++ P D L Sbjct: 124 LDLDPKEVSELVLQLGAPPATR-NATSRGLFLSAATDAMLDAAVRLLRLLDTPEDVPALA 182 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 RE++Y +L G L + + ++R + ++ Y E L V++LA MS Sbjct: 183 PLATRELVYRLLKSEQGERLAQVARADSPGHRVTRAIAWLKANYAEPLKVDELARCCCMS 242 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S+ HH+F+ +TS SPLQY K RL +AR +++ +G++ S AA VGYESASQFSRE+ R Sbjct: 243 TSSLHHHFRVLTSMSPLQYQKQLRLQEARRLMLSEGIEVSKAAYTVGYESASQFSREYSR 302 Query: 300 YFGVTPGED 308 +G+ P +D Sbjct: 303 LYGIAPSKD 311 >UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria RepID=Q3JGA1_BURP1 Length = 390 Score = 309 bits (793), Expect = 7e-83, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 149/301 (49%), Gaps = 2/301 (0%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73 P RE R LA + + + + +P + +P + + Sbjct: 83 PDAQTLAPREAARRELAALIERFAPADGAHPSAIPALSFFRCSSPVDLGCSVTRAAFVFA 142 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLM 132 G K + + + YD + L+ +V LP + T A++ P +++ +D+ ++ EL Sbjct: 143 AQGAKRVTVAGQAYEYDHQQCLVTSVDLPMLSQVTRASAGAPYLCVKIALDVQRIAELSA 202 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 ++ + GI LSE + AA RL+ +++ P D IL I +E+LY +LT Sbjct: 203 EM-RMPPPEAVPTGEGIVVGALSEPLFDAALRLVRLLDTPADIPILAPLIEKELLYRLLT 261 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 G L + + I+R ++ + + YTE L VE LA + NMSVS+ HH+FK VT+ Sbjct: 262 SGLGARLRHIAVAGSQTYRIARAIEWLRHHYTEPLRVETLAQQVNMSVSSLHHHFKHVTT 321 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 SPLQY K RLH+AR +++ + A+RVGY+S SQFSRE+ R FG P D + Sbjct: 322 LSPLQYQKQLRLHEARRLLLGQHGDVGSVALRVGYDSPSQFSREYSRLFGAPPLRDVVQR 381 Query: 313 R 313 R Sbjct: 382 R 382 >UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=A6B9E2_VIBPA Length = 307 Score = 309 bits (792), Expect = 9e-83, Method: Composition-based stats. Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 2/298 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 R + LA +++ N + +R TP T + P I ++ G K Sbjct: 11 SRAFATQKLAKLIDRWTGDANQYDTPISGLRFSRWTTPTPPTSYTHNPSICLIAQGRKRV 70 Query: 81 YINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + E F YDAN +L+ ++ LP A+ E P GL + +D+ ++ +L++D GE Sbjct: 71 LLGEESFIYDANHFLISSIDLPIIANIIEASEEQPYLGLIMELDLTEISQLIVD-GELAF 129 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 Q A GI LSE +L A RL +++ + +IL I REI Y +L G L Sbjct: 130 IQSKEAQKGIAVGELSESLLDAFVRLAELLNEGQNIKILAPIIKREIFYRLLMSEQGTRL 189 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 +V+ +H I++ + ++N + + LSV LA+ MS S+F+ +F+S+TS +PLQ+ Sbjct: 190 HQIVTAGSHSHQIAKAIDWLKNNFVKPLSVGDLASYTGMSKSSFYTHFRSMTSMTPLQFQ 249 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 K RL +AR +++ + + A AA +VGYES SQFSRE+ R FG P +D +R G Sbjct: 250 KKLRLSEARRLMLTENLDAMAATFKVGYESPSQFSREYSRLFGAPPSKDIKSLRENLG 307 >UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGU5_9DELT Length = 301 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 99/287 (34%), Positives = 154/287 (53%), Gaps = 2/287 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA ++ +L E S +P +R+ P V Y+P + ++ G K + + Sbjct: 13 LAARIERLAVGEGSTETAVPGLRVFRATEPVGPFAVEYQPCLCVVGQGRKAATVGAQTCE 72 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 YD ++YL++ +PLP A+ E P + L +D+ +L +LLM + DE ++ Sbjct: 73 YDPDQYLVVALPLPVSARIIEASREQPFLSMVLAIDVAELGQLLMAM-PDEPEPERAPST 131 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 + +++ + A RLL E P +AR+LG I+REIL++VL G G L +L R Sbjct: 132 AMWVSSIEPRLRDAVLRLLQAAEDPTEARVLGPGIVREILFHVLGGDQGALLRSLALRNG 191 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H + R ++ +++ Y + L V +A +S S H FK VT SP+QYLK RLH+A Sbjct: 192 HGQRVVRAIRFMQDHYEQALDVATIAKSVGVSASRLQHVFKDVTGLSPIQYLKRVRLHRA 251 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +MI+ +G+ A AA RVGY S SQFSREFKR FG++P + Sbjct: 252 HVMILTEGLGAGEAAFRVGYGSPSQFSREFKRQFGLSPSHAVREQQG 298 >UniRef50_A6W3U1 AraC-type transcriptional regulator domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3U1_MARMS Length = 297 Score = 308 bits (790), Expect = 1e-82, Method: Composition-based stats. Identities = 112/283 (39%), Positives = 179/283 (63%), Gaps = 1/283 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L D + L +++ L+ +VRL+ R P++Y PG+ I+ G KIGY+ +R Sbjct: 11 LVDLIKPLVSEDGFCDTLIANVRLMKCAKSLPRMPLIYRPGLTIIVQGQKIGYLGDREIH 70 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 Y++ YL+ T+PLPFECET+A+ + PL G+ +++D + L EL+ + +E S++ Sbjct: 71 YNSGHYLVQTLPLPFECETFASQQEPLLGVSIDIDPVLLSELIS-VPYEEKLNQSISYFP 129 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 ++S +S+E++ + RL+ + P A+I+G+ +RE+++ L P G AL ALV Q Sbjct: 130 MSSVPMSDEMVESVSRLIKALHDPYTAKIMGQSRVREVIFEALQSPQGDALRALVLNQGR 189 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 FSLI LK++ + + + VEQLA +ANMSVS+FHH+FK++ +SPLQYLK RL KA+ Sbjct: 190 FSLIVNSLKQLHLQLDQEVRVEQLAEDANMSVSSFHHHFKNIAGSSPLQYLKRLRLLKAQ 249 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 M++ + S ++ VGY+S QFSR++KRYFG P +D R Sbjct: 250 MLLNQGHLNVSQISLEVGYKSVHQFSRDYKRYFGAPPTKDKLR 292 >UniRef50_Q1QZB6 Transcriptional regulator, AraC family n=10 Tax=Gammaproteobacteria RepID=Q1QZB6_CHRSD Length = 306 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 112/304 (36%), Positives = 172/304 (56%), Gaps = 3/304 (0%) Query: 13 IPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIII 72 P + LA ++ L +E + LP V+L+ ARTP+MYEP ++I Sbjct: 5 APYATSPAADHGLEARLASRLAPLATQEGFAATPLPGVQLITSHCGHARTPLMYEPSLVI 64 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLM 132 + G+K GY+ +R+ Y A YL+ +PLPFECET+A+ PL GL +++D+ L EL+ Sbjct: 65 IVQGNKTGYLGDRIIHYGAGHYLIQAMPLPFECETHASDTAPLLGLSVSLDMAMLGELVR 124 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + P+ + + + + ++ + RL+D + A LG IRE+L+ L Sbjct: 125 RL---PTAPPTRMPAPMAAVDMDADMGDSVMRLIDCLHDHEQAAALGDGRIREVLFAALR 181 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 GP G +L LV+ +S I+ L + +Y ++L+VE LA NMS S FHH+FK T Sbjct: 182 GPQGASLRQLVAHHGQYSRIAEALTFLHQQYAQSLNVESLARRVNMSASHFHHHFKRTTQ 241 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 +P+QYLK RL KAR+++ G + + AA +VGY+SASQFSR++KRYFG +P +D Sbjct: 242 LAPMQYLKRLRLLKARVLLTQQGYQVAQAATQVGYQSASQFSRDYKRYFGQSPLDDRQSR 301 Query: 313 RAMQ 316 A Sbjct: 302 SAHS 305 >UniRef50_C9Y4C2 Uncharacterized HTH-type transcriptional regulator yqhC n=1 Tax=Cronobacter turicensis RepID=C9Y4C2_CROTZ Length = 340 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 1/295 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + + R + +L +E L VR + ARTPV+YEP I+I+ G K Sbjct: 30 MTMQPVQRETIALLEQLAPQEGYTRSQLDAVRFMRSNRALARTPVLYEPCIVIVCQGCKR 89 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 GY+ ++++ Y+A+ YL+L+VPLPF ET AT + PL + + +++ + EL++ + + E Sbjct: 90 GYLADKIYTYNASHYLVLSVPLPFSTETDATPQKPLLAVAVRLEMTVIAELVLAL-DGER 148 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + GI S L + RLL + P +A+ILG I++E+ Y VL G GGA+ Sbjct: 149 GAGAAPPEGILSTPLDAPLADTTLRLLRALSHPQEAQILGPAIVKELYYRVLIGEQGGAI 208 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 A ++ FS ISRVL+RI Y L V LAAEA MS AFH +FK+VT SP+QY+ Sbjct: 209 RAALASFGKFSRISRVLQRIHADYAGRLDVATLAAEAGMSAPAFHAHFKAVTRNSPVQYI 268 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RLH+AR+++I D + A+ AA+RVGYES SQF+REF+R FG TPG + M+ Sbjct: 269 KAVRLHQARLLMIRDNLSAATAALRVGYESPSQFNREFRRLFGRTPGAETREMKQ 323 >UniRef50_D2C3B7 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D2C3B7_DICD5 Length = 300 Score = 305 bits (783), Expect = 9e-82, Method: Composition-based stats. Identities = 102/295 (34%), Positives = 164/295 (55%), Gaps = 2/295 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + LA V K+ + +P + L A P +Y G+ I G K Sbjct: 1 MLAQNGSERLALLVAKMATIDGDYETAIPALSLYRRSAATAPMPCIYGLGLGITVQGGKR 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + +++F Y + L+ +V LP T A+++ P G+RLN+D + +L+ D+ + Sbjct: 61 VTLGDKIFDYGPGQSLVTSVDLPVVSHVTKASTDEPYLGIRLNLDARLISQLVADM-DFS 119 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 H + + S I+ L E +L A RL+ ++ + I +EI +L G G Sbjct: 120 HTAKTCSTSAISVVELDESLLEAICRLIRLLNDHTLLPHIAPLIQQEITARLLHGQHGPT 179 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L LV++ + I++VL ++ +T++LS+E+LAA+A MS SAF +F+S+T SPLQY Sbjct: 180 LRHLVTQGSPGQQIAKVLSWLKLNFTQDLSMEELAAKAYMSPSAFRQHFRSLTDMSPLQY 239 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LKN RL +AR +++++ + AS+AA+RVGYESASQFSRE+ R FG P D ++R Sbjct: 240 LKNLRLQEARQLMMNESLDASSAAVRVGYESASQFSREYTRLFGSPPLRDMKKLR 294 >UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=Bacteria RepID=B2J894_NOSP7 Length = 326 Score = 305 bits (783), Expect = 9e-82, Method: Composition-based stats. Identities = 96/311 (30%), Positives = 162/311 (52%), Gaps = 7/311 (2%) Query: 7 QSNCRII--PKKLRDMKREEICR-LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTP 63 +SN ++ P+ R + R + R L + + + + ++ L + +P Sbjct: 9 KSNIDLMNDPQAKRQVDRAQANRDELKELIAQAIPHDGTIE-PLKGLHFNRSSSPSECVH 67 Query: 64 VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNV 122 + P + G K + ++YD YLL TV LP + A+ P LRL++ Sbjct: 68 SVSIPAFCAIAQGSKEVLLGSERYQYDPMHYLLATVELPIVSQILEASKAQPYLSLRLDL 127 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQI 182 D + ++++ G + + A I+ + L+ +L A RL+ +++ P +A +L I Sbjct: 128 DPTLVGSVMVEAGYPSRRRADVKA--IDVSPLNANLLDAVVRLVRLLDSPAEAHVLAPLI 185 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 REI+Y +L G G L + + I+R ++R+ + E + +E +A E MSVS Sbjct: 186 KREIIYRLLMGEQGNRLRHIAVLGGYTYHIARAVERLRKDFNEPIKIESIARELGMSVSG 245 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 FHH+FKSVT+ SPLQY K RL +AR +++ + + A++AA RVGY+ AS F+RE+KR FG Sbjct: 246 FHHHFKSVTAMSPLQYQKQLRLQEARRLMLGEKLDATSAAYRVGYDDASHFNREYKRLFG 305 Query: 303 VTPGEDAARMR 313 P D R+R Sbjct: 306 APPMRDVERLR 316 >UniRef50_B4X416 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X416_9GAMM Length = 355 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 158/301 (52%), Gaps = 6/301 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + + LA V + + L +P V L + + +YEP +I + G K + Sbjct: 52 TLEQQLAQLVCEQIAEPGMLDSGIPGVSLYRADDTSSCASTVYEPSLIFILQGTKTIELG 111 Query: 84 ERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGE-----D 137 +R Y + YL +V LP + A+ P ++++VD ++ +L++++G+ + Sbjct: 112 DREIVYGPSSYLASSVHLPVLGQIVDASPNHPYLAVKIDVDPQEVTDLVLELGDKVGRYE 171 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 + G+ + + E + A RLL++M P D +L REI+Y L G G Sbjct: 172 PGNECPEVGCGLCMSHMDESMQGALYRLLNLMTTPDDIAVLAPLTRREIIYRSLIGEMGP 231 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 + S + + ISRV+ ++++Y+E L V+ LA ANMS S H+FK VT SPLQ Sbjct: 232 RMRKFASIDSQANRISRVISTLKDRYSEPLRVKDLADSANMSESTLFHSFKQVTRMSPLQ 291 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 + K RLH+AR +++ +G++A+ A+ RVGYES S FSRE+ R FG P D +++R Q Sbjct: 292 FQKKLRLHEARRLMLTEGLEAATASYRVGYESPSHFSREYSRLFGAPPRADVSKLRGAQA 351 Query: 318 N 318 Sbjct: 352 G 352 >UniRef50_UPI0001744B11 AraC-type transcriptional regulator domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B11 Length = 302 Score = 302 bits (775), Expect = 7e-81, Method: Composition-based stats. Identities = 130/289 (44%), Positives = 174/289 (60%), Gaps = 2/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 L +++L + LP+VR + +P++Y+P I+I+ G K G + R Sbjct: 11 PRLIALLSELAAGQGFSDSRLPEVRFMRSTQHVPNSPIVYDPSIVIIAQGRKTGTFDGRK 70 Query: 87 FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YD + YL+L VPLPFECET + PL G+ + V + ELL+ + +A Sbjct: 71 IIYDPSHYLVLAVPLPFECETEGSLGEPLLGVSIAVKPATVAELLLQMTFIRD--EDVAP 128 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 I+SA L E + A RLL+ + DARILG Q +RE++Y VL GP G L L + Sbjct: 129 HAIDSAGLDEALSEATVRLLESLRTEEDARILGPQRVREVVYRVLQGPLGHCLRLLAAPD 188 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 +HF ISRVL R+ YT+N V LA EA MSVS FH +FK+VTS+SPLQYLKN RLHK Sbjct: 189 SHFGQISRVLNRLHLDYTQNHDVTFLAQEAGMSVSTFHAHFKAVTSSSPLQYLKNIRLHK 248 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 AR +++H+G A AA++VGYESASQFSREFKR FG P +A R+R Sbjct: 249 ARQLMVHEGANAGVAALQVGYESASQFSREFKRLFGEGPAAEAERLRKA 297 >UniRef50_C6D8S3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S3_PAESJ Length = 305 Score = 302 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 2/296 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 ++ E+ R LAD + + + +P++ L++ +Y+P + ++ G K Sbjct: 5 LRMEQALRQLADLILRHAPSSGTFPTSVPNLSLMHATHLSEPLESVYKPSLCLVALGAKT 64 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + + +RYD ++++ LP + A+ E P L+L+ D + +++ + Sbjct: 65 ATLGDETYRYDPMTFVVIAAELPIISKIVEASPEAPYLSLKLSFDPDVILDMVKESSHAA 124 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + A+ GI S +L AA RL+ +++ P D +L I+REILY VL G Sbjct: 125 ASP-ADASPGITMNRTSPGLLEAAVRLVQLLDTPEDIPVLAPLIVREILYRVLQSEHGSL 183 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 + + +H I++ ++ I +Y E L ++QLA A++S SAFH +FK VTS SPLQY Sbjct: 184 IHSFAMIGSHSHNIAQAIRMINRQYAEPLVIDQLAKVASLSTSAFHKHFKRVTSMSPLQY 243 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RL +AR +++ + + AS AA RVGYES SQFSRE+ R +G P D RA Sbjct: 244 QKTLRLQEARRLMLTETVHASEAAFRVGYESPSQFSREYARMYGRPPMLDIQEQRA 299 >UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X2I3_OXAFO Length = 304 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 150/291 (51%), Gaps = 2/291 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + +K+ K + + L + YEP + ++ G K + + Sbjct: 14 HTIREKLLKWVPEPGDYQTPIEGFSLFRRDDCDVCDSCFYEPAVGVVIQGKKRSVVGSQE 73 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + Y N+ LL +V LP + A E P GL L +D + +L+ ++ Sbjct: 74 YHYRENDSLLNSVDLPSKNYILDAGPEKPFLGLGLKIDKYMVGQLISELPHLSQ-NSDEP 132 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G++ + ++L A RL ++++ P +L I+REI Y +L GP G L A+ + Sbjct: 133 VRGLSVTPIEADLLDAFLRLTELLDNPEQIPVLAPMIVREIHYRLLVGPRGRFLRAINTA 192 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + + I++V+ + N Y E L V++LA +ANM+ S FH +FK +T+ SPLQY K RL+ Sbjct: 193 GSQGNRIAQVISWLRNNYKEPLQVDELARKANMATSTFHRHFKQITTLSPLQYQKRLRLY 252 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 +A+ +++ + A+ A + VGYES +QF+RE+KR FG P + ++R ++ Sbjct: 253 EAQRLMLVENEYAANACLAVGYESPTQFNREYKRLFGEPPSRNIHKVREVR 303 >UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLD5_9BURK Length = 290 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 118/287 (41%), Positives = 176/287 (61%), Gaps = 1/287 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + +L E L V + AR P +YEP I+I+ G K G+ + ++ Sbjct: 1 MVAITQQLATTEGYSESALSGVTFMRCNGALARMPALYEPSIVIVIQGTKHGFHDGNIYT 60 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 YDAN YL+++VPLPF+ ET AT+E PL GL + VD ELL+D+ E Q A Sbjct: 61 YDANHYLVVSVPLPFDVETQATAEKPLLGLIIRVDFEMAAELLLDLKESVVDQ-GEAVPP 119 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 + ++ + ++ + RLL++++ P ++R+LG +I+EI Y VLTG G +L S ++ Sbjct: 120 LFASRMDAKLGDSVFRLLEILQSPTESRVLGSSVIKEITYRVLTGEQGRSLRLAFSSDSY 179 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 S +++VLK I + Y L V LA EANMSV FH +FKSVTS++P+QY+K RLH+AR Sbjct: 180 LSRVAKVLKLIHSNYHCALDVATLAQEANMSVPTFHAHFKSVTSSTPIQYIKAIRLHQAR 239 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +M+I G+ A+ + VGYES SQFSREFKRYFG TP +++ +++ Sbjct: 240 LMMIRKGISAAQVSAMVGYESPSQFSREFKRYFGRTPVQESQYSQSI 286 >UniRef50_D2L3Y8 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3Y8_9DELT Length = 296 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 121/285 (42%), Positives = 174/285 (61%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L + + L +E LP V L R P +Y+PG++IL G K GY+ V Sbjct: 5 LKEIMASLAIREGESPSALPGVTFLRHSRSQPRAPALYQPGVVILGQGRKRGYLGPEVHA 64 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 YDAN YL+L VPLP ECE A+ + P+ +RL+VD + +LL+ +G++E ++ G Sbjct: 65 YDANNYLVLAVPLPAECEVIASPQEPMLSMRLDVDAAMVADLLLAMGDNEPRTRLLSKGG 124 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 I L+ ++ AA RL + PLD+R+L + +E+LY VL GG L AL +RQ Sbjct: 125 IAPTPLTSDVREAATRLARALASPLDSRVLAPALAKELLYRVLLDAQGGLLRALAARQGD 184 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 F+ I+ +L+RI Y + ++ LA + +MS + H +FK+VT+TSP+QY+K RLHKAR Sbjct: 185 FARIADLLRRIHANYATPMEIDALANQIDMSPATLHRHFKAVTATSPMQYVKAIRLHKAR 244 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 M+++ DG + AA RVGYES SQFSRE+KR+F TP DAAR R Sbjct: 245 MLMVADGFGVAMAASRVGYESPSQFSREYKRFFKTTPAADAARWR 289 >UniRef50_A6M087 AraC-type transcriptional regulator domain protein n=2 Tax=Firmicutes RepID=A6M087_CLOB8 Length = 311 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 163/305 (53%), Gaps = 5/305 (1%) Query: 13 IPKKLRDMKREEIC---RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG 69 + K++ ++K ++C R LA V K ++ S +P + L+ +Y P Sbjct: 1 MEKRIYNIKNYKLCSQQRRLASLVEKFTYRDGFQSTDIPSLDLIRASNISEPLHSIYIPS 60 Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQ 128 I ++ G K + + +RYDA+ YL+ +V LP + AT + P +RL+ + Q+ Sbjct: 61 ICVIVQGAKTVILGKESYRYDASSYLVASVNLPIIGKIIEATPDQPYLCVRLSFNSDQIL 120 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 +++ + +D +P + G+ + +L A RL+ ++E + +L IREILY Sbjct: 121 DIIKESKQDFEEKPGLE-RGLTVTKGNSLLLDALLRLVSLLETTEEIPVLAPLFIREILY 179 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 VL G L +H IS+ + I N + + L +++LA E NMS S+ HH FK Sbjct: 180 RVLQDKHGYILKQFAMIGSHARAISKAINLINNNFEKPLRIDELAKEINMSSSSLHHCFK 239 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 VT+ SPLQY K RL +AR +++ + ++A+ A +VGYES SQFSRE+ R FG+ P D Sbjct: 240 KVTAMSPLQYQKQIRLQEARRLLLSEVLEAAEAGYKVGYESPSQFSREYARMFGLPPISD 299 Query: 309 AARMR 313 R++ Sbjct: 300 IKRLK 304 >UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria RepID=C3X9E6_OXAFO Length = 304 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + +K+ K + + L YEP + ++ G K YI R +R Sbjct: 16 IKEKLLKWLPESGEYQTPVNGFFLFRKNECECPENCFYEPAVGVIIQGQKHSYIGSREYR 75 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 Y L+ + LP + AT + P G+ + +D +L +I Sbjct: 76 YGEGYCLVNGIDLPAKNTILDATPDNPFLGMGIRLDKSLTTQLAAEIPPPPKTGNEPD-C 134 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 G++ +IL A RLLD++E+P ++ I+REI Y +L GP G L + + T Sbjct: 135 GLSLTRTDPDILDAFARLLDLLEKPEQIPVMAPMILREIHYRLLIGPQGSFLRTVNTFGT 194 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 + +++ + + N Y E + V++LA + NM+ S FH +FK +TS SPLQ+ K RL++A Sbjct: 195 QGNQVAQAISWLRNNYKEPVQVDELAKKVNMATSTFHRHFKQLTSLSPLQFQKRLRLYEA 254 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 + +++ + A+ A M VGYES +QF+RE+KR FG P + ++R ++ Sbjct: 255 QRLMLVENEYAANACMAVGYESPTQFNREYKRLFGEPPSRNINKVRELR 303 >UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=Caulobacter RepID=B0T4V7_CAUSK Length = 303 Score = 299 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 3/289 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA + + ++ ++ P T ++ + ++ G K V Sbjct: 7 LAALIERYAPEDGFYDICGDKASVVRVSKPSEPTHGVFGAAVCVVAQGRKKVLAGGSVLV 66 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA- 146 YDA YL+ +V LP + A+ E P R+ +D + +LL+ +G + Sbjct: 67 YDAMHYLVASVDLPVIGQVVDASPEEPYLCFRMTLDPAVIGDLLLQLGGEPALAQDAGPL 126 Query: 147 -SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + + ++ +L A R++ +++ P DA IL I REILY +L G G L + Sbjct: 127 VGAMAVSQVNPPLLDAVMRMVRLIDTPRDAAILAPLIEREILYRMLLGDQGPRLAQIARA 186 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + R + I+ + + S+E LAAEA MS SA H +FK+VT+ SPLQY K RL Sbjct: 187 DGRMRQVKRAIGWIQQNFDQPFSIEDLAAEARMSPSALHRHFKAVTALSPLQYQKQIRLQ 246 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR +I+ + A +A VGY+SASQFSRE+ R FG P DAAR+R+ Sbjct: 247 EARKLILVQRLDAGSAGHAVGYDSASQFSREYARLFGAPPLRDAARLRS 295 >UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMS2_VARPS Length = 330 Score = 298 bits (764), Expect = 1e-79, Method: Composition-based stats. Identities = 91/313 (29%), Positives = 159/313 (50%), Gaps = 3/313 (0%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLK-NKENSLSGLLPDVRLLYGETPF 59 M Q+ + I + + +E + L +N++ ++ ++ + +++ P Sbjct: 1 MPQDTPEIAAAIAQPMPLEPELDEARKELVALINRITRGQDGTVETPVAGLQVFCISKPD 60 Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGL 118 P + ++ G K + + ++ YD YL+ +V LP + TS+ P G+ Sbjct: 61 GPKHAFATPALGLIAQGSKRIIVGDDIYVYDPMHYLVTSVDLPVCGQVRLTSDNEPYLGV 120 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 RL + I ++ +L+ D + + A+ G+ + +L RLL ++E P D I+ Sbjct: 121 RLELAIDEIGKLIGD-EKLPAKANAPASRGMYVNRIGMPVLEPVLRLLRLVESPEDVPIM 179 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 I REI+Y +L G L + + +H I++ + + Y+++L +E +A +M Sbjct: 180 APLIKREIMYRLLVNGEGARLRQIALQDSHTQRIAKAISALRINYSQSLRIEDMARAVHM 239 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 SVS+FHH+FK+VT+ SPLQY K RL +AR ++ G S+AA VGYES SQF+RE+ Sbjct: 240 SVSSFHHHFKAVTAMSPLQYQKQLRLQEARRQMLMAGADVSSAAHSVGYESPSQFAREYS 299 Query: 299 RYFGVTPGEDAAR 311 R FG P D R Sbjct: 300 RMFGAPPLRDKRR 312 >UniRef50_A9HQ74 Putative transcriptional regulator, AraC family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQ74_GLUDA Length = 306 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 3/287 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L D + + +P + L E +Y + ++ G K + F Sbjct: 7 LRDLIGRHAAG-RRTPTAVPGLMLFRSEGRSVPLNCIYRSRLYLIVQGRKRVELGTHAFT 65 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 YD + YL+ TV LP A+ P L ++ D L +LL+ + A Sbjct: 66 YDDSHYLITTVDLPVSSAVIEASPHQPYLALSIDFDPAVLADLLLSVPVGGDRGAGDEA- 124 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 G+ A+L E +L + RL+ +++ P D +L + +EI Y +LTGP G L A+ + Sbjct: 125 GLAVASLDEALLDSVRRLVALLDTPGDIAVLAPLVRQEIYYRLLTGPLGVRLRAIAVADS 184 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H + I+RV+ + Y E ++ LA A MS + +FK+V SP+QY RL +A Sbjct: 185 HLTRIARVMAWMRTHYAEEFGIDDLARLAGMSAPSLFRHFKAVALMSPMQYRTCIRLQEA 244 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 R ++ DG A+ A VGY+S SQFSR+++R FGV P DAAR+R Sbjct: 245 RRRLVADGDDAAEAGFAVGYDSPSQFSRDYRRMFGVPPARDAARLRG 291 >UniRef50_Q1QSH7 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1QSH7_CHRSD Length = 322 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 94/304 (30%), Positives = 161/304 (52%), Gaps = 7/304 (2%) Query: 18 RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART--PVMYEPGIIILFS 75 D + ++ L+ ++ K +E +P + L+ + +Y+P + ++ Sbjct: 11 PDDEIVQLADTLSRRIQKWAPEEGLTPTAVPGLELVRANSSLTNCIGSTVYDPSLCLIAQ 70 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDI 134 G K ++ +R Y ++ V LP + T A++E P GL+L VD ++ +L++++ Sbjct: 71 GSKRIWLGDREIDYGPLSCMVSAVHLPVLGKITEASAERPYLGLKLAVDAQEVTDLVLEL 130 Query: 135 GE----DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 GE E + A G+ + ++ A RL+ +++ P D RIL + REI Y Sbjct: 131 GEGLSEMEERGCAETACGLGRVQAEKGLVEAMLRLVSLLDSPQDIRILAPLVRREIFYRA 190 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L G G + T IS+V+ +++++TE L V +LA NMS S+ H+FK V Sbjct: 191 LVGEIGLHMRKFAVADTQTHRISKVIAVLKDRFTEPLRVRELADMVNMSESSLFHSFKQV 250 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T SP+Q+ K RLH+AR +++ +GM+A+ A+ RVGY S S FSRE+ R FGV P D + Sbjct: 251 TRMSPVQFQKKLRLHEARRLMLAEGMEAATASFRVGYGSPSHFSREYSRLFGVPPRTDVS 310 Query: 311 RMRA 314 ++R Sbjct: 311 KLRG 314 >UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=Q0C048_HYPNA Length = 307 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 2/291 (0%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + + + E + V ++ +Y P + I G K Sbjct: 4 SLLAAVNAWIETQGGGEGLFPTQIESVHIVRSFEARMPMRQVYRPSLCIALQGAKEILFG 63 Query: 84 ERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 + VFRY A E L + + LP A+S+VP G+ L++D+ L+++L + E Sbjct: 64 DDVFRYGAMECLAVGLDLPASGRVVEASSDVPYIGITLDLDMAILRDVLGYL-ETLPVPA 122 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 S + + AT + + +RL+ +++ P IL I+REI Y++LT P GG L L Sbjct: 123 SGSGPCLFVATADQTLADCLQRLIRLLQTPEAIPILYPAIMREICYWLLTSPNGGELRNL 182 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 +T+ ++RV+ + + + L VEQLA A MS S+FHH+FK++TS +PLQY K Sbjct: 183 ALPETNSDRVARVIHLLHANFAQTLRVEQLAETARMSASSFHHHFKALTSMTPLQYQKQL 242 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL +AR +++ + + AA +VGYES SQFSRE+ R FGV P +D ++ Sbjct: 243 RLLEARRVMVTEAASVAEAAYQVGYESPSQFSREYSRMFGVAPKQDVLNLQ 293 >UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=Thermotogaceae RepID=A5INH3_THEP1 Length = 299 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 89/294 (30%), Positives = 160/294 (54%), Gaps = 7/294 (2%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 + + R L +++ L K+ + LP + + E+P + + P I I G K Sbjct: 3 EFDHTRRKLIERILHLTEKQ-PVVRPLPGLTVGRRESPTEPSTYILPPSICIAVQGAKRV 61 Query: 81 YINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 I E + YD +LL + +P + A+ E P G+ +D+ L E++++ + + Sbjct: 62 LIGEEYYVYDVENFLLNSFDIPVIAQVIEASKEKPYIGITWEIDMEILMEIVVE--QKLN 119 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 +P ++ G + ++ ++L A +R+LD+++ P L I +EI+Y +L G L Sbjct: 120 TRPIASSRGTSLGKVTYQLLDAFKRMLDLLDEPEHISALLPVIKKEIIYRLLVSEQGSKL 179 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + + + + L ++ ++E +++++LA MSVS F+ NFK++T +PLQY Sbjct: 180 IQIALSGKND--VIAALNYLKEHFSEPVNMKKLAEMVGMSVSTFYQNFKTLTGMTPLQYQ 237 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K RL +AR +++ G + AA +VGYES SQFSRE+KR+FGV+P +DA R+R Sbjct: 238 KKLRLCEARKLLMA-GHDVTTAAYQVGYESLSQFSREYKRFFGVSPSQDAKRLR 290 >UniRef50_Q88K66 Transcriptional regulator, AraC family n=4 Tax=Pseudomonas putida RepID=Q88K66_PSEPK Length = 301 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 116/281 (41%), Positives = 165/281 (58%), Gaps = 1/281 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L + L + + LLP V++L + A +P +YEP ++I+ G K+ + R Sbjct: 13 LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ-PSMAAS 147 Y A YL+ + +PF CET+AT E PL G+ + +D L EL+ +G + + Sbjct: 73 YGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTPQ 132 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 + SA L + + ERLL ++ PLDA++LG +RE+LY L GP G L ALV +Q Sbjct: 133 SMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQG 192 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 HF+ I L + Y E LSVE LAA ANMSVS FH +FK T +P+QYLK RL KA Sbjct: 193 HFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLKA 252 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 + M+I +G+ + AA RVGY+S SQFSRE+KR F +PG++ Sbjct: 253 QQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDE 293 >UniRef50_B2KD36 Transcriptional regulator, AraC family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KD36_ELUMP Length = 298 Score = 296 bits (759), Expect = 5e-79, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 158/294 (53%), Gaps = 4/294 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E+ + L +KV L K S + + +R+ P Y+P I ++ G K N Sbjct: 7 ELNKQLQEKVLNLVPKPGSFATDIKGLRIFRRNQPEEARKCFYKPIIALMLQGSKQCVFN 66 Query: 84 ERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 Y ANE L+ ++ +P T A+ E P G+ L +D +++L+++ + P Sbjct: 67 AEKIEYVANECLVTSIDIPSASRITDASPEKPCIGVTLGIDSFIIKQLIIETNLLKTDYP 126 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDAR-ILGKQIIREILYYVLTGPCGGALLA 201 A + + EIL A R++ ++E+P + + IL IIREI Y +L P G L Sbjct: 127 --AQRAVGVTKANSEILDAFLRIVTLLEQPKEQQNILAPMIIREIYYRLLMTPVGEQLRM 184 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + T + I+ ++ ++ + E L+VE+LAA+ NMS S+F+ NF+ VT SPLQY K Sbjct: 185 VNTVGTKSNQIATAIEWLKENFKEELNVEKLAAKVNMSPSSFYRNFRKVTDVSPLQYQKQ 244 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 RL++A+ +++ D + A+ A VGYES +QF+RE+KR FG P D ++ + Sbjct: 245 LRLYEAQRLMVSDNLDAANAGYAVGYESPTQFNREYKRMFGNPPKTDIKILQTL 298 >UniRef50_A9IS89 Transcriptional regulator, AraC family n=13 Tax=Bacteria RepID=A9IS89_BORPD Length = 358 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 145/287 (50%), Gaps = 2/287 (0%) Query: 33 VNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDAN 92 VN+ + + + P +Y P + +L G K + E V+ Y A+ Sbjct: 64 VNRHAAADGLHQTAIEGLSFFRSSQPSELAFCVYRPSLALLVQGAKRVEVGEDVYEYSAS 123 Query: 93 EYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINS 151 YLL ++ LP T A+ P L++D L+ + G + + A G+ Sbjct: 124 HYLLTSIDLPVASRVTLASPGTPYLCFVLDLDPRDTAGLIAETGLPQP-ADTDAGRGLAV 182 Query: 152 ATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSL 211 A L +L AA R+ +++ P D ++L + REI+Y +LTG GG L + + Sbjct: 183 AQLCPPLLDAALRMARLLDAPQDIQVLAPLLRREIIYRLLTGALGGRLRHIARHEGPTHQ 242 Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + + ++ ++ + L +EQLA NMS S+ HH+FK+VT+ SPLQY K RL +AR ++ Sbjct: 243 VRQAIEWLQAHFDRPLRIEQLAHTVNMSTSSLHHHFKAVTAMSPLQYQKQLRLQEARRLL 302 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A AAA +VGYESASQFSRE+ R +G P D AR+R Sbjct: 303 LAGLADAGAAARQVGYESASQFSREYSRQYGAPPRRDVARLRGASAE 349 >UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=Alphaproteobacteria RepID=A1B7B0_PARDP Length = 317 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 88/299 (29%), Positives = 148/299 (49%), Gaps = 6/299 (2%) Query: 16 KLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFS 75 +LR M+ + + L + + + + + L P +Y P + ++ Sbjct: 15 RLRFMENDHLAP-LKELIARQWQAHGR-ETPIEGLVLTSVTAPTGPIHAVYRPSLCVVAQ 72 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDI 134 G K + ER +RYDA + L+ ++ +P E T AT + P L +D + +LL++ Sbjct: 73 GAKTSMLGERAYRYDAGKCLIASMEVPIRAEITRATPDRPYLAFSLALDPATISDLLLE- 131 Query: 135 GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 + + A + + E+ RLL + +RP D IL + REI + +L GP Sbjct: 132 --RDGTDDAPAGAALAVHAFGPELADPLCRLLALCDRPRDIAILAPLVRREITWLLLNGP 189 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G AL + + + I+R + I + + L++ QLA A MS + FH +FK+VT+ + Sbjct: 190 MGPALRQIGLAGSPMARIARAIACIREGFADKLNIRQLADVAGMSPATFHRHFKAVTAMT 249 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 P+QY K RL +AR +++ D + +GYES SQFSRE++R FG PG D +R Sbjct: 250 PVQYQKQLRLQEARRLLLFDNADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQEIR 308 >UniRef50_Q15PL3 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15PL3_PSEA6 Length = 296 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 107/287 (37%), Positives = 163/287 (56%), Gaps = 4/287 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + + A+K L N E + L VR R P++Y+ GIII+ G K+ + Sbjct: 6 DAIHVFAEKAG-LLNLEGHVETALSGVRFFRASKGSPRQPLVYQSGIIIVVQGRKVIHFP 64 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 + +Y A +YL+L VP+P ECE + + +P+ GL ++V L +L+ + + + + S Sbjct: 65 DHHIQYGAGDYLVLGVPMPLECEAFVDNGLPIMGLSIDVKPALLHQLVNHMQQHQRYTQS 124 Query: 144 MAASGIN---SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 S I+ +A + + +RLL V+ P++ I G +++E++Y VL GP G L Sbjct: 125 EPCSQISCAQAAKVDAPLEHTIQRLLAVLANPVETDIFGADVVKELVYRVLCGPQGKTLF 184 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 L H++ ++R L + Y ++VE LA + NMSVSAFH FK VT SPLQYLK Sbjct: 185 GLAQHDGHYARVARALASLHANYASPITVETLADDVNMSVSAFHRAFKQVTFESPLQYLK 244 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 RL KA+ +I +G +A+ AA +VGY SASQFSREFKR+F +P E Sbjct: 245 KVRLVKAKDLITANGSRANEAAFQVGYTSASQFSREFKRHFNQSPSE 291 >UniRef50_A9WCQ6 AraC-type transcriptional regulator domain protein n=2 Tax=Chloroflexus RepID=A9WCQ6_CHLAA Length = 314 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPD-VRLLYGETPFARTPVMYEPGIII 72 P +R+ L + V +L + S + LP +RL Y P ++ + P + + Sbjct: 7 PSTVRETPIAGKRAALTEYVLRLFRQYESDTLELPGGLRLYYTTRPTSKRHGVSTPALCV 66 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVDILQLQELL 131 + G K + + YDA YL+ LP A + E P G+ L +D + ++ Sbjct: 67 VLQGAKEVVLGSDRYCYDAQHYLITAAALPITTRVIAASPEQPYLGIVLQLDPALVGSVI 126 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP-LDARILGKQIIREILYYV 190 + G + + + + + L ++L A RL+ + E P +A L I+REI++ + Sbjct: 127 AEAG--QSGLTNRSVCAFHVSPLEGKLLDAVTRLVRLAEDPPEEANFLRPLIVREIVFRL 184 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L G G L + + I + L+R+ ++ + L + ++A E MSVS+FHH+FK++ Sbjct: 185 LRGNQGDRLQQIAATGGQIQRIIKALERLRAEFDQPLRIAEMARELGMSVSSFHHHFKAI 244 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T+ +P+Q+ K RL +AR +++ +G+ AS+AA +VGY S F+R++KR+FG TP D Sbjct: 245 TTLTPVQFQKQLRLQEARRLMLSEGLDASSAAFQVGYHDPSHFTRDYKRFFGTTPLRDMK 304 Query: 311 RMRAMQG 317 R+RAM Sbjct: 305 RLRAMTA 311 >UniRef50_Q30WL5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WL5_DESDG Length = 294 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 112/277 (40%), Positives = 167/277 (60%), Gaps = 3/277 (1%) Query: 41 NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 + LP VR AR P++Y PGI I+ SGHK+ Y+ + FRYD + YL+ +V Sbjct: 17 GVVESRLPGVRFFKETRHVARRPMLYNPGICIVVSGHKVAYVGGQTFRYDVDNYLVTSVA 76 Query: 101 LPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS---GINSATLSEE 157 +PFECE++ + E PL G+ +++DI QL L+ + ++ +++ I + + + Sbjct: 77 MPFECESFPSQENPLLGMFIDIDIGQLNNLISMMERQDNPSVAVSNGRQLAIGPSAMDAD 136 Query: 158 ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLK 217 + AA +L+ ++ +ARILG ++RE+ Y L G L +LV FS ++R++ Sbjct: 137 MKDAAVKLVKALQSEQEARILGPGLVREVYYRALCGNQAPVLYSLVRGSGSFSQVARIIH 196 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 +E Y+E ++QLA +MSVSAFH FK +T+ SPLQYLK RL +AR +I+ GMK Sbjct: 197 MMEGSYSEKFDIQQLADSVHMSVSAFHKAFKDITADSPLQYLKKIRLSRARDLIVQQGMK 256 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 A AA VGYES SQFSREFKRYFG +P E +R+ Sbjct: 257 AYLAADEVGYESPSQFSREFKRYFGRSPAELMRDVRS 293 >UniRef50_B9Z2E6 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2E6_9NEIS Length = 324 Score = 294 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 153/292 (52%), Gaps = 5/292 (1%) Query: 19 DMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 + R+E+ +A+ V+ + + + L + P ++EPGI ++ G K Sbjct: 12 EAVRQELAAAIANWVD---SDAAPYVTPIQRLTLYRLQMPSEPIRCIFEPGIALIVQGSK 68 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGED 137 + E Y A + L+ V +P T A+ E P L + +D+ + EL+++ G Sbjct: 69 RVLLGEETLSYHAGQLLVTAVNVPTIANITTASPEQPYLSLWMPIDLQAMAELMVE-GNL 127 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 +P + GI + IL + RL+++++ P +L I+REILY +L G Sbjct: 128 SPPRPQPTSRGIAVGQANAAILKSFLRLIELLDEPETIPVLSPLILREILYRLLMSDFGA 187 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 L + + + I+R + ++ + + L VE+LAA MS S FHH+FK++T+ SPLQ Sbjct: 188 HLWQISTAGSQSHRIARAIDWLQANFAKALRVEELAASVQMSASTFHHHFKALTAMSPLQ 247 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 Y K RLH+AR ++++D + A+ A RVGYESASQF RE+ R FG P D Sbjct: 248 YQKKLRLHEARRLMLNDRLDAATTAFRVGYESASQFGREYHRMFGAPPARDI 299 >UniRef50_Q396P4 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. 383 RepID=Q396P4_BURS3 Length = 299 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 4/294 (1%) Query: 29 LADKVNKLKN---KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 L ++V +L +E+ ++ + + LL P++ +P + ++ G K R Sbjct: 5 LVERVARLTGAPGEESPVATAIDGLILLRSNREKLPAPLIMKPALCVVVQGGKWTTFGGR 64 Query: 86 VFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 + Y L+++V +P A+ P GL L D+ ++E+L + Sbjct: 65 RYDYGPGRALVVSVEMPATSRIVKASESEPFLGLVLEFDLAMMREVLERLDTPPPQPHGA 124 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 G+ + R++ +++ P ++ + REI Y++L GP GG + +V Sbjct: 125 IGHGVCVTDFGGPLADCVLRMMRLLDTPAAIPVVAPLVKREICYWLLAGPHGGEVSRVVF 184 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 H + + + ++ E + VE LAA A MS SAFH FK++TS +PLQY K RL Sbjct: 185 ANGHAQRVVAAIHALRGQFAEAIRVEDLAAVAQMSPSAFHRQFKALTSMTPLQYQKQLRL 244 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 +AR +++ A AA RVGYESASQFSRE+ R FG P D ++ Sbjct: 245 LEARHLMVTGAANAETAAYRVGYESASQFSREYARMFGAPPRRDVVTLKIASAG 298 >UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein n=2 Tax=Acinetobacter RepID=C0VLQ6_9GAMM Length = 291 Score = 293 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 101/281 (35%), Positives = 158/281 (56%), Gaps = 2/281 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 ++L KL KE + + + L+ + V+ EP ++ + G K GYI Sbjct: 5 QILISLFLKLIAKEGFFATAIDGITLMRVDHNTPPLAVLQEPTLVFVLQGSKRGYIGTET 64 Query: 87 FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 + + E L+++V +PF+C+T A+ E+P+ + + ++ + ELL E+ + Sbjct: 65 YAFQQGECLIVSVSMPFDCDTVASPELPMIAMIMKLEADTVNELLAKTY-LENDKFKPLT 123 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 +G++ E I RLL + D+ ILG+QI RE+LY V+ AL LV Q Sbjct: 124 TGMSVIQYDETISNVLIRLLKTLSSEQDSLILGEQIKRELLYRVIQHSGADALTGLVV-Q 182 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + I ++ + I++ +TE L+VE LA +ANMS+SAFH FK VT SPLQYLK RLHK Sbjct: 183 GNLRQIYKICEYIQHHFTEKLTVEMLAEQANMSISAFHKAFKQVTLHSPLQYLKVTRLHK 242 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 A+ M+ ++ + AA VGY+S+SQFSREFK+ FG +P + Sbjct: 243 AKQMLQNENQSVAQAAYAVGYQSSSQFSREFKKQFGFSPNQ 283 >UniRef50_C3KMN9 Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KMN9_RHISN Length = 321 Score = 292 bits (749), Expect = 9e-78, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 4/297 (1%) Query: 18 RDMKREE---ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 R REE + + D++ +L +P + L P +YEP + ++ Sbjct: 10 RQRLREETAPLRARILDELAQLPWDGLRYGHAVPGLSLYRVVEPAGPFSAVYEPSLSLII 69 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMD 133 G K ++ + YD + + L + LP + A+ + P L +D+ +L+ ++ D Sbjct: 70 QGSKRVHVGSQTLVYDESCFFLTALGLPATGQICEASLDEPYVAASLRLDLEKLRRIIAD 129 Query: 134 IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG 193 P G+ + + A RL+ + P D L I EILY +LTG Sbjct: 130 HDLHPTDTPERDLVGVAVGAATPLLFDAFLRLISLANAPGDIPFLANHIHNEILYRLLTG 189 Query: 194 PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTST 253 G L T+ + ++R + ++ YT L VE+LA ANM VS HH+F+++T+ Sbjct: 190 EQGARLRRFALAGTNSNRVARAVAWLKENYTRPLRVEELAEIANMGVSTLHHHFRAMTAM 249 Query: 254 SPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 SPLQ+ K+ RLH A +++ + A+ AA+RVGYES +QFSRE++R FG P D Sbjct: 250 SPLQFQKHLRLHHAGELMLSQSLDAATAALRVGYESPTQFSREYRRAFGHPPLRDIK 306 >UniRef50_A6W3U9 AraC-type transcriptional regulator domain protein n=4 Tax=Proteobacteria RepID=A6W3U9_MARMS Length = 336 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 4/272 (1%) Query: 43 LSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP 102 +P + +L P P +Y+P I ++ G K I ++V Y A + + +V LP Sbjct: 49 TQTQIPRLDILRVCQPTELFPEIYQPLISLILQGSKRIVIGDQVVDYRAGQSFITSVELP 108 Query: 103 FECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCA 161 E ++ P LRL++D + E+L ++ + G +SE++ A Sbjct: 109 VIGEVVESSPASPYLALRLSLDRALVTEILCEM---DSPLSLSETRGFCIDQVSEDLADA 165 Query: 162 AERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIEN 221 R++ + + P D ++ I REILY +L GP G L + F I + I Sbjct: 166 WYRMIRLTDHPEDIDLIAPLIEREILYRMLRGPQGAVLRQIAGIDDRFFQIRNAITWIRK 225 Query: 222 KYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAA 281 Y VE+LAA NMS SAFH FK+ SPLQY K RL++AR M+ + + Sbjct: 226 HYATAFRVEELAATVNMSPSAFHRRFKATVGLSPLQYQKQIRLYEARRMLFTELGGVTTV 285 Query: 282 AMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 A+ VGYES SQFSRE+ R FG P D +R Sbjct: 286 ALSVGYESLSQFSREYSRLFGAPPARDIRTLR 317 >UniRef50_C9P783 AraC-type DNA-binding domain-containing protein n=3 Tax=Vibrionaceae RepID=C9P783_VIBME Length = 302 Score = 292 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 102/290 (35%), Positives = 162/290 (55%), Gaps = 4/290 (1%) Query: 21 KREEICRLLADKVNK--LKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 ++ ++ +L+ + V+K L + E +P V +R P +Y+ GI+IL G K Sbjct: 7 EKPDLAQLMQNYVDKYALHHLEGCTDTAIPGVWFYRSSQGNSRQPFIYQSGIVILGQGQK 66 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 ++ Y N+YL++ VP+P ECE A PL GL +++D L + + + E+ Sbjct: 67 RIHLGANAVDYGPNDYLVVGVPMPLECEAVAKQNQPLLGLTIDIDHSLLLKQVAALEENG 126 Query: 139 HFQPSMA--ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 P A G+ S ++ +L + +RL++ + L+A +LG ++ E+ + LT G Sbjct: 127 FKPPVDANNPCGLKSVQMNHTMLNSCKRLMNALIDGLEAELLGGSLLEEMAFRALTSLEG 186 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L L + H++ I++ L ++ Y +L+V LA EANMSVSAFH F+ VT SPL Sbjct: 187 HVLFELAHHEGHYARIAKALSKVHRDYATSLTVNTLAEEANMSVSAFHQAFRGVTMESPL 246 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 QYLK RL+KA+ +I +G + + AA VGY S SQFSRE+KR+F TP Sbjct: 247 QYLKKVRLNKAKELIQIEGKRVNDAARLVGYSSPSQFSREYKRHFNHTPR 296 >UniRef50_B0KFF0 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=B0KFF0_PSEPG Length = 321 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 2/287 (0%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L + L + + D+ + P + EP I+++ G K I VF Sbjct: 22 TLCRVIGALAPTAGDFATSIADLSVYRRNAPAPPITCIIEPSIVLVVQGAKEMVIGSDVF 81 Query: 88 RYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YD +L+ ++ +P T A+ P GL +D+ L EL+ G + Sbjct: 82 PYDRTRFLVTSLNIPAHSAVTMASDAAPCLGLVFKLDLRTLSELIAQDGRLPLNGQAFHT 141 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 S LS ++ + RL+ ++E P +L I REI Y +L L + S Sbjct: 142 SA-GVGKLSSKLFESFARLIQLLEEPDAIPVLWPLIQREIHYRLLLSDQAPLLRHIASVG 200 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + I++ + ++ Y L V++LA+ M +S FH +F+ +T+ SPLQY K RL++ Sbjct: 201 SKGHRIAKAIDWMKLNYAAPLRVDELASRVQMGLSTFHQHFRQLTAMSPLQYQKWLRLNE 260 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 A+ +++++ + A+ AA +VGYES SQFSRE+ R FG+ P D +R Sbjct: 261 AKRLMLNEHLDAATAAFKVGYESPSQFSREYGRQFGMPPKRDIVELR 307 >UniRef50_Q5E474 Predicted DNA-binding transcriptional regulator n=23 Tax=Gammaproteobacteria RepID=Q5E474_VIBF1 Length = 294 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 164/290 (56%), Gaps = 5/290 (1%) Query: 22 REEICRLLADKVNKLK--NKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + L+ + + E +P V R P +Y+ GII+L GHK Sbjct: 1 MKSLGELMQSYADHCGFNDLEGIKETAIPGVWFYRSSKGNQRQPFVYQSGIIVLGKGHKN 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 YI + Y ++YL++ VP+P ECE + + PL GL ++VD L L+ ++ E + Sbjct: 61 IYIGNQPVHYGPDDYLVVGVPMPLECEAFPENGEPLLGLSIDVDSALLHRLVNELEEAKF 120 Query: 140 ---FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 Q S G+ S ++ ++L + +RL+ + LD ++LG+ ++ EI+Y VLTGP G Sbjct: 121 QPCIQTSSDGFGLTSVKMANDMLESCKRLMAALHTDLDTKMLGEALLTEIVYRVLTGPEG 180 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L L + ++ +++ + ++ Y +L+V+ LA EANMSVSAFH F+ +T SPL Sbjct: 181 HVLFNLAHHDSQYARVAKAMNKMHQSYANSLTVQNLAEEANMSVSAFHSAFRKITLESPL 240 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 QYLK RL+KA+ +I +G + + AA VGY S SQFSREFKR+F VTP Sbjct: 241 QYLKKVRLNKAKELIQLEGKRVNDAAHLVGYTSTSQFSREFKRHFNVTPK 290 >UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Proteobacteria RepID=B9JGH7_AGRRK Length = 335 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 92/289 (31%), Positives = 149/289 (51%), Gaps = 1/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + LA + + + + + L Y P I+ GHK + Sbjct: 42 QELASIIARFATGDGEHHTPIEGLNLYRQSAATVWQHGAYRPCFAIVVQGHKTLTVGADT 101 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + Y EY+L + LP + SE P + +D +L+ELL +G + Sbjct: 102 YHYGVGEYILTALDLPVSTQVTNVGSETPYLCFGMALDSERLKELLSRVGIPREAVTAEP 161 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ S E+L A+ RLL +++RP D + I +EILY +LTGP G LL + Sbjct: 162 VRGLAVNPASPELLDASLRLLRLLDRPEDIPAMAPLIEQEILYRLLTGPNGPRLLQVAMA 221 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ++ + ++R + I +T+ L +E+LA A MSVS+ HH+FK+VT+ +P+QY K RLH Sbjct: 222 ESQSNRVARAIAWIRGNFTQPLRIEELAERAGMSVSSLHHHFKAVTAMTPIQYQKQLRLH 281 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR ++I + + +A RVGY+S SQFSRE+ R +G++P D +R+ Sbjct: 282 EARRLMIVEQLDVGSAGHRVGYQSPSQFSREYSRLYGLSPLRDVEGIRS 330 >UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KE48_PSEF5 Length = 323 Score = 289 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 2/305 (0%) Query: 10 CRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG 69 C + M + LA + + +P++ L TP + P +Y G Sbjct: 17 CTVATSDCPPMTQPRTPTALAALIARHTPHSGDFPSAVPNLTLHRRSTPTSAIPCIYSLG 76 Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQ 128 + ++ G K + E V Y A + +L ++ P T ++ P G+ L +D+ Q+ Sbjct: 77 LGVIAQGGKQVLLQEAVINYRAGQGMLTSIDQPVVARVTQGSAAEPFLGMMLTLDMHQIL 136 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 + + + S + L + A ERL+ +++ P L I +EI+ Sbjct: 137 QTAAQMQPPPPSRAS-DYRTVVVDELEPGLASALERLVGLLDEPALIPQLAPLIQQEIIV 195 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 +L GP AL L++ + I + + ++ +T+ L V+ LA A+MS S F +F+ Sbjct: 196 RLLAGPYSLALQQLLAVGSPTQQIFKTVAWLKQNFTQPLRVDDLAQRAHMSPSTFRQHFR 255 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 ++ SPLQ+ K RL +AR +++ + A AA VGYESASQFSRE+ R FG P D Sbjct: 256 AIIGVSPLQFHKQLRLQEARQLMLSQNIDAGRAAGLVGYESASQFSREYSRVFGAPPQRD 315 Query: 309 AARMR 313 RMR Sbjct: 316 IRRMR 320 >UniRef50_C3MHY3 Putative transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MHY3_RHISN Length = 313 Score = 289 bits (740), Expect = 9e-77, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 163/298 (54%), Gaps = 3/298 (1%) Query: 17 LRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 + DM+R + + + + ++ + ++P + + + Y+P + I+ G Sbjct: 1 MSDMQRTP-RQEMIEIIARIAEVDGDHPTIVPGLSIHRHSSSAKPNCAAYKPSLAIIVQG 59 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG 135 K + +F Y A++YLL ++ LP + A+++ P + +D ++ LL +G Sbjct: 60 AKRVLLGGELFVYGASDYLLTSIDLPVFSQISLASADEPYLSMNFQIDTTKIPALLDRLG 119 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 E P+ ++ G+ TL+ ++ AA RLL +++R + IL I +EILY +L GP Sbjct: 120 EQPAASPA-SSRGMTVNTLTADLEDAALRLLRLLDRHAEMPILLPLIEQEILYRLLVGPH 178 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L + + ++ I R + ++ Y+ L ++ LA+ +MSVS+ HH+FK++T+ SP Sbjct: 179 GARLRQMTTAESQPHQIGRAVAWLKEHYSRPLRIDDLASRVSMSVSSLHHHFKAITAMSP 238 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LQY K RL +AR +++ + + A A +VGY+S SQFSRE+ R+FG P D R+R Sbjct: 239 LQYQKQLRLQEARRLMLEERLDAGDAGHQVGYDSQSQFSREYARHFGEPPMRDIGRVR 296 >UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3B5_HERA2 Length = 312 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 156/290 (53%), Gaps = 3/290 (1%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFAR-TPVMYEPGIIILFSGHKIGYINE 84 R LA + + + P + P R P +Y+P I ++ G K + + Sbjct: 20 RRYLAQLLAQHAPHDGRFDLAFPRTYAIRESKPHQRSLPALYQPSICLVAQGAKQLVLGD 79 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 + + YD L++ V LP + T A++ P +L D ++ EL + + P+ Sbjct: 80 QTYNYDTEHVLIVAVDLPVAAQITQASAAEPYLCFKLEFDPQRVAELALKVYSQGVPAPT 139 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 I++ + +++ AA RLLD++ +P + +L +I E++ +L P GG L + Sbjct: 140 QL-RAISTERTNRQLVQAASRLLDLLSQPDEVELLAPLVIDEMIIRLLRSPFGGRLAQIG 198 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + + +++ + + + + L VE+LA ANMSVSAFH +FK+VT+ SP+Q+ K R Sbjct: 199 QTTSRVTPVAQAIGWLRRHFAQPLRVEELATLANMSVSAFHLHFKAVTALSPIQFQKTLR 258 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LH+AR +++ ++ + + +VGY S SQFSRE++RYFG +P ED AR+R Sbjct: 259 LHEARRLLVATALEIGSISQQVGYASLSQFSREYRRYFGCSPTEDLARLR 308 >UniRef50_B0SVQ8 Transcriptional regulator, AraC family n=8 Tax=cellular organisms RepID=B0SVQ8_CAUSK Length = 323 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 106/291 (36%), Positives = 156/291 (53%), Gaps = 12/291 (4%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 EE+ RL A N+ +P + ++ G P +YEP I ++ G K I Sbjct: 6 EELRRLAARAENR------RTETGIPRLAMVRGAIPEHELAAVYEPMINLILQGSKSMTI 59 Query: 83 NERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + RYD Y +++V LP + A++ P + L ++ + +L D Sbjct: 60 GGQTLRYDPATYFVMSVDLPAIGAVHSASTGEPYLAVSLTLEPSVIAAIL-----DLAQP 114 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 + SG + AT++ E+L A RL+ +MERPLD +LG RE+LY VL GP G L Sbjct: 115 SAGQGSGFSVATVTPELLDAWVRLMGLMERPLDIAVLGPGYEREVLYRVLQGPQGWMLRD 174 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + T S I ++ I + + L +E LA + MSVSAFH FK+VT+ SPLQ+ K Sbjct: 175 IATPDTALSRIHAAVRWIRENFNKPLRIEDLARQVAMSVSAFHRQFKTVTNMSPLQFQKT 234 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 RL +AR ++ + + A+A A RVGYESASQFSRE+ R FG +P DAA + Sbjct: 235 IRLMQARRLMTTEALGAAAVATRVGYESASQFSREYARLFGRSPARDAAAL 285 >UniRef50_Q021U2 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021U2_SOLUE Length = 316 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 5/304 (1%) Query: 14 PKKLRDMKRE---EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 PK+ + E+ R+LA ++ S +P + L +P YEP + Sbjct: 4 PKQQEPDRNPALIELRRVLAARIAGHAVSGGEHSTSVPGLTLYRRISPSPCHRGSYEPSL 63 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQE 129 + G K + + D + +L+ ++ +P + + A+ +VPL + L +D+ + E Sbjct: 64 NVFAQGRKRINLGGTEYLCDGSSFLVSSIDIPVQSQIVEASEDVPLLSMLLRLDMAMVGE 123 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 +L + Q S G+ + +L A RL++ ++ P D L I REI+Y Sbjct: 124 VLSR-EDLPEPQGSSHHHGLAVGATTTGLLGACIRLMETLDTPEDIPFLSPLIQREIIYR 182 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 VL G L A+ +R ++ + ++ YT+ L +E+LA + M VS HH F++ Sbjct: 183 VLRTEQGQRLRAIATRGDLSHRTAKAIAWLKANYTKPLRMEELAEVSRMGVSTLHHQFRA 242 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +T+ SPLQY K RL AR ++ +G+ A+ AA VGYES SQFSRE+ R+FG P D Sbjct: 243 LTAMSPLQYQKQLRLQAARQRMLTEGIDATRAAYDVGYESVSQFSREYSRFFGQPPMRDI 302 Query: 310 ARMR 313 +R Sbjct: 303 RALR 306 >UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5P8_VIBHO Length = 293 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 100/271 (36%), Positives = 145/271 (53%), Gaps = 3/271 (1%) Query: 41 NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 +P ++L ++P P++ +P I + K ++ + Y A+ YL+ +V Sbjct: 17 GKWQTDIPGLKLYASQSPIVLMPIVLQPSICFVLQAKKRVATGQQAYVYSADSYLINSVT 76 Query: 101 LPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGIN-SATLSEEI 158 P E T P G LN+D + +L+M++ + S SG SA ++ EI Sbjct: 77 RPVEASLLDVTDSHPYVGFSLNIDQQMVGQLMMEMTRWQKEMYSAPQSGFTQSAPITPEI 136 Query: 159 LCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKR 218 A RLL ++ +D IL I RE+ Y VL GP GG L VS T + I+ V+ Sbjct: 137 SNIASRLLGLLNDEMDKEILAPSICRELYYAVLKGPGGGLLRNCVSNHTGANRIAPVVHY 196 Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 IE + NL++E++A+ A MS S H +FK VT+ SP+QY+K+ RLHKAR M+ G + Sbjct: 197 IEQNFERNLTIEEIASVAGMSASTLHDHFKQVTTVSPMQYVKSLRLHKARSML-SVGYQV 255 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + VGY S SQFSREFKRYFGVTP E Sbjct: 256 AEVCYGVGYSSPSQFSREFKRYFGVTPSEAR 286 >UniRef50_A6UG08 AraC-type transcriptional regulator domain protein n=2 Tax=Sinorhizobium RepID=A6UG08_SINMW Length = 318 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 2/298 (0%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73 P++ + + + D+++KL S +P + L P +YEP + + Sbjct: 7 PQRNLREETAPLRAQILDRLSKLPWDGLSFEHPIPGLSLYRIIQPAGPFSSVYEPSLSFI 66 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQLQELLM 132 G K + YD + L + LP + A SE P L +D+ +++ ++ Sbjct: 67 IKGSKNVRVGNETMVYDEGCFFLTAIGLPVTGQICAASEREPYVAAALRLDMEKVRRIIA 126 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 D P G+ T + E+ A RL+ + P D L I EI+Y +LT Sbjct: 127 DHDIHPTDLPERDL-GVAVGTATCELFDALFRLISLAGAPADIPFLAGHIQNEIIYRLLT 185 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 G G L T+ + +++ + ++ YT+ L VE+LA ANM VS HH+F+++T+ Sbjct: 186 GEQGARLRRFALAGTNSNRVAKAVAWLKENYTKQLRVEELAEIANMGVSTLHHHFRAMTA 245 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 SPLQ+ K+ RLH AR +++ + A+ AA+RVGYES +QF+RE++R FG P D Sbjct: 246 MSPLQFQKHLRLHHARELMLSQSLDAATAALRVGYESPTQFNREYRRAFGHPPLRDIR 303 >UniRef50_Q1ZUN2 AraC-family trancriptional regulator n=2 Tax=Photobacterium RepID=Q1ZUN2_PHOAS Length = 304 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 111/293 (37%), Positives = 173/293 (59%), Gaps = 7/293 (2%) Query: 22 REEICRLLADKVNKL------KNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFS 75 + E+ R LA ++L ++ N + LL VRL + TP MYE GI+++F Sbjct: 2 KAELKRQLAIVASQLCEYYKISDQTNRVHTLLTGVRLFRIDRYHKLTPKMYEQGIVVIFQ 61 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG 135 G KIG++N+ F YD + L+++ P CET+A+ + PL G+ +++DI + +L+ D+ Sbjct: 62 GSKIGHLNQHQFGYDVEQCLIVSTSYPITCETFASQQEPLMGINIDLDINAISQLVSDME 121 Query: 136 -EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 E +++ G++ A ++E + LL+V+ PLDA++LG I+R+ YY+L Sbjct: 122 LESKNWGELDTRCGVSPAPMTESMYLCMLELLNVLHNPLDAKVLGPSILRQFFYYLLQSE 181 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G L + + + IS V+ ++ + + L V +LAA A MSVS FH FK V + Sbjct: 182 KGYLLAHYCEQDSSLAKISTVIGHVQKNFAQKLHVNELAAMAGMSVSVFHKVFKQVVTDP 241 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 PLQY+K RL+ A+ I+ +G+ AS A+ RVGYESA+QFSREFKRYFGV P Sbjct: 242 PLQYIKKIRLNHAKNYILQEGLSASLASQRVGYESAAQFSREFKRYFGVPPSR 294 >UniRef50_Q4ZQJ7 Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZQJ7_PSEU2 Length = 295 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 104/276 (37%), Positives = 149/276 (53%), Gaps = 7/276 (2%) Query: 39 KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLT 98 ++ LP V ++ E A +Y+P + ++ G K I E RY A Y L+ Sbjct: 16 QDKWTDTGLPRVSMVRAE---ACADQVYQPMLHLVLQGTKTLSIGEDASRYTAGHYFLVP 72 Query: 99 VPLPFECETYA-TSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEE 157 V +P + +A T + P + L +D + LLM G + G+ +E Sbjct: 73 VDVPATGQIHADTPDKPYLAVSLTLDPEVIATLLMAEGRAPEAPQNACFEGVI---APDE 129 Query: 158 ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLK 217 ++ A R+L +M+RP +A IL I REIL+ L GP GG L + + I RV + Sbjct: 130 MIDAWLRMLRLMDRPHEAAILAPMIEREILFRALQGPLGGILRDVARPDGRLTQIRRVTQ 189 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 I YTE VE LA A+MSV+AF+ +FKSVT+ SP+QY K RL KAR +++ D + Sbjct: 190 WIGEHYTEPFRVEPLAQMADMSVAAFYRHFKSVTAMSPIQYQKRLRLLKARWLLLFDTLD 249 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 A++ A VGYESASQF+RE+ R FG+ P DAAR R Sbjct: 250 ATSIAYAVGYESASQFNREYARLFGLPPARDAARFR 285 >UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F2M7_9ALTE Length = 310 Score = 287 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 5/305 (1%) Query: 11 RIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 P + L D V + + +R+ P +Y+ Sbjct: 2 TAQPNVIPMQPDNPSLSQLRDLVEQQWQAHGP-ESAIDGLRVTRALEPSGTIRALYQTSF 60 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQE 129 I+ G K+ + E F Y E LL +V +P ATS+ P L L++D + E Sbjct: 61 CIVLQGAKVTAVGESAFHYRQGECLLASVNVPVNSRIVQATSDKPYLALSLSIDPAMISE 120 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 LL+ E + P A +++A + +E+ RLL ++++P D +L + REI + Sbjct: 121 LLVTHPEMAYRCPKQPA--LSTAGMPDELYDPVIRLLRLLDQPDDREVLEPLVRREICWR 178 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 VL P G AL + + + + I RV ++ Y + V +LAA A+MS + FH +FKS Sbjct: 179 VLRSPLGPALQQVGLKDSDTARIGRVTAWMQANYQQPFRVAELAAMASMSPATFHRHFKS 238 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +T +P+Q+ K RL +AR +++ D ++ RVGYES SQFSR++++ FG PG D Sbjct: 239 ITRLTPVQFQKLVRLQEARRLLLSDQE-VASIGYRVGYESPSQFSRDYRKLFGAPPGRDK 297 Query: 310 ARMRA 314 A MR+ Sbjct: 298 AVMRS 302 >UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CSL0_PAESJ Length = 301 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 88/290 (30%), Positives = 146/290 (50%), Gaps = 3/290 (1%) Query: 30 ADKVNKLKNKE-NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 A+ +++ ++ + + L P + ++ I +F G K + E F Sbjct: 13 AELIDRFAGQQNGVHETPISSLFLFRQNQPTEPSHGVHSRSICFVFQGKKEVSLAEERFP 72 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 Y +EYL+ +V LP A+SE P L+L Q+ ++ + G Q A Sbjct: 73 YSPDEYLVASVELPVISRILEASSERPYLALKLEFSPEQILGVMKESGIQPRPQEH-ARR 131 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 G+ + + A RL+ ++E+P D +L +I+EILY +L G +L L Sbjct: 132 GLFIGQMERSLTDAIHRLVQLLEQPDDIPLLAPLLIKEILYRILQSKHGVSLEQLALEGG 191 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 I V+ I+ Y +++ ++LAA ANMSV + +FK VT+ SP+Q+ K+ RL A Sbjct: 192 GAFRIKEVIDHIKKNYEKSIRSDELAAIANMSVPTLYRHFKEVTAMSPIQFQKHLRLQAA 251 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 R +++ + + A+ A RVGYES SQFSRE+ R FG++P +D R+R Sbjct: 252 RSLLLSEPVNAADVAFRVGYESPSQFSREYARMFGLSPIQDIKRLRTFDA 301 >UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDX1_9CAUL Length = 302 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 5/290 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + ++ V + + +P +RL + P V YEP + ++ SG K + Sbjct: 4 SLLPEMSAIVARHAPPD-LSRSAVPGLRLYGSDAPTRMVSVGYEPMLCLVVSGGKQTILG 62 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 E V+ Y A + L+++ LP E P L +++ + L+++IG PS Sbjct: 63 ETVYSYRAGDCLVVSAELPVCGSII---EAPYRALSFDLNPATIAGLMVEIGAPAASDPS 119 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 SGI+ L +E+L RLL +++RP + ++ I RE+++ +L + + Sbjct: 120 -PPSGIHVTQLEDELLEPMARLLRLLDRPHEIAVMTPMIERELVWRLLHSRHAATVRQIG 178 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S ++ S +SR + I Y E + +E L+ A MS+S FH +F++VT+ SPLQ+ K R Sbjct: 179 SAESRLSGVSRAINWIRAHYAEPMRLEALSDLAGMSLSTFHRHFRTVTTMSPLQFQKQVR 238 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 L +AR ++ A+ VGY+S SQFSRE+ R FG+ PG DAARMR Sbjct: 239 LQQARARLLSGADGAAETGFAVGYDSPSQFSREYARQFGMPPGRDAARMR 288 >UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVI5_9RHOB Length = 298 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 3/293 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M +E+ R L + + + L+ P PV+Y P ++ G K Sbjct: 1 MPPDELIRKLVAFADDHGAGGDPFPVGAGSMTLVRQRQPTLIYPVVYRPIFCLVLQGEKQ 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 Y+ + R+ A + L++ + LP + A+ P L L +D+ ++EL ++I D Sbjct: 61 TYLGSQTVRFGAMQSLIVGLDLPAQARVVSASRTEPYVALALPLDMALIRELALEI--DR 118 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + S A+ + S I+ A RL ++ + P ++L ++REI Y++LT G Sbjct: 119 PGKSSPASGAVASGRADAAIVDAMRRLFELSQMPEAGKVLLPLLLREIHYWLLTAKHGAI 178 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L + + +H + I+RV+ I +L V+ LA +A MSVSAFH +FK +T TSPLQ+ Sbjct: 179 LRQVAEQDSHAARIARVIAGIRRDIAASLRVDDLAGDAGMSVSAFHAHFKELTGTSPLQF 238 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 K RL +AR ++ + + S AA +VGYES +QFSRE+ R+FG+ P D A+ Sbjct: 239 QKQLRLMEARRLLQAEKLSVSRAAFQVGYESPTQFSREYSRHFGLPPRADKAQ 291 >UniRef50_B1X2S3 Transcriptional Regulator, AraC family n=3 Tax=Cyanobacteria RepID=B1X2S3_CYAA5 Length = 313 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 165/300 (55%), Gaps = 4/300 (1%) Query: 19 DMKREEICRLLADKVNKLK--NKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 + C+ LA V + N S + + L +T +Y+P + ++ G Sbjct: 8 PDVIADRCQELATLVMRHTEFNGNGIHSTAIKQLDLTRSDTVSTALHSVYQPILALVVQG 67 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQELLMDIG 135 K + E+ ++Y A +YL+++V LP AT E P GL+LN+D++QL +L++ + Sbjct: 68 QKEALLGEKRYQYGAGQYLIISVDLPLSGFVIEATPEKPYLGLKLNLDLMQLCDLVVQMS 127 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + + + + G++ + + ++ A RL+ +++ P +L +I E+ Y +L G Sbjct: 128 PRLNKKEN-SVQGLSVSNVDAGLIECALRLVKLLDTPQHISMLAPIMICELNYRLLIGKQ 186 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 A+ + + ++ I+ +K ++ K+T+ + +E LA+ +MS S+FH +FK VTS SP Sbjct: 187 SEAVRQIATSGSNMQRIASAIKLLKAKFTQPIRIEDLASHVSMSTSSFHQHFKRVTSMSP 246 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 LQY K RL +AR +++ + + A +AA +VGYES+SQFSRE+ R FG P D R+R Sbjct: 247 LQYQKQLRLLEARRLMLAENVDAMSAAYQVGYESSSQFSREYARMFGAPPIRDIERLRTA 306 >UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=B8JHL7_ANAD2 Length = 311 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 150/303 (49%), Gaps = 2/303 (0%) Query: 13 IPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIII 72 +P + I LA + + S + D+ E P EP +++ Sbjct: 1 MPSDQTGTSLDAIRAALARTIGRWTEGVEDRSTPIADLLFFRREGPTPPGICRVEPSVVL 60 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELL 131 + G K + + YD + +L+ ++ +P + A+ + P GL L +D+ L EL+ Sbjct: 61 VVQGKKRMLAGDDAYAYDRDHFLIASLDVPASSQVLEASPKRPCLGLTLKLDLRLLAELV 120 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 + + AA G+ ++ +L A RL D+++ P +L + RE+ Y +L Sbjct: 121 PQV-HLAAREERSAAKGMALGAVTPPLLDAFMRLTDLLDEPDAIDVLAPLVRRELHYRLL 179 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 T G L + S + I+R ++ ++ Y L + +LAA +MS S+ H +F+ +T Sbjct: 180 TSDQAGRLRQIASVGSQSHAIARAIEWLKVNYAAPLRIAELAARVHMSPSSLHQHFRQLT 239 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + SPLQY K RL++AR +++++G A+ AA +VGYES SQFSRE+ R FG P Sbjct: 240 AMSPLQYQKWLRLNEARRVMLNEGFDAAGAAFKVGYESPSQFSREYARLFGAPPRRHVVS 299 Query: 312 MRA 314 +R+ Sbjct: 300 LRS 302 >UniRef50_C0N265 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N265_9GAMM Length = 302 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 6/303 (1%) Query: 13 IPKKLRDMKREEI--CRLLADKVNKLKNKENSLSGLLPDVRLLY-GETPFARTPVMYEPG 69 +PK+ K E+ LA +++ + + P VR+L + +PG Sbjct: 1 MPKQNHQDKNNELMLRNKLAKLISQYAPADGLFE-VCPGVRVLRESSQDAKPARNISQPG 59 Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQ 128 + I+ G K + +F YD + ++ + +P A+ + P L +++ +L Sbjct: 60 MCIVAQGAKRVVLGNDIFEYDNSRMVVYSTEVPISANIIRASIDEPYLCLIIDITPQKLA 119 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 EL + I+ + +I+ A RLL++ P D +L ++ EI Sbjct: 120 ELTAKAFPH-GLPRVPESRAIHIGPTNPKIVDAGIRLLELFSEPDDVDLLIPLVLDEIFI 178 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 +L G + + ++ +S+ + + Y + + V+QLAA NMSVSAFH +FK Sbjct: 179 RLLRSHIGALVAQIGITDSNLQKVSKGISWVREHYAQPMKVDQLAAHVNMSVSAFHQHFK 238 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 +VT+ SPLQ+ K RLH+A+ +++ M S+A+++VGY S SQFSRE+ R FGV+P +D Sbjct: 239 AVTTMSPLQFQKELRLHEAKNLMLSKMMDVSSASLQVGYASVSQFSREYSRLFGVSPSKD 298 Query: 309 AAR 311 Sbjct: 299 TRS 301 >UniRef50_C8SHN4 Transcriptional regulator, AraC family n=2 Tax=Mesorhizobium RepID=C8SHN4_9RHIZ Length = 297 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 8/292 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 EE + L + + +P V + E + P + +P + + G K Sbjct: 1 MEEALQELIVIAGRYAHG-RRTKTAIPRVSIGRSEIATSPLPELCQPTALFVLQGTKTVL 59 Query: 82 INERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I +R Y A Y + V P + A+S P + +DI + L++D Sbjct: 60 IGDRTLFYGAGSYFVYAVETPATSQLIEASSARPYVAVAFALDIELIATLIVDH------ 113 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 +P++ + +E+L A R+L +++RP + +L + REI + +L GP G L Sbjct: 114 KPALDGDSFVTNRADDELLDAWRRMLRLLDRPAEIPVLAPMLEREIAFRLLQGPQGAKLR 173 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 L S I R I + Y E + V +LA A+MS ++FH +FK+ T+ SP+QY K Sbjct: 174 QLARADGRLSQIRRATAWIRSHYNEPIDVTELAELAHMSNASFHRHFKAATAMSPIQYQK 233 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 RL +AR ++I + A+ A VGYESASQFSRE+ R+FG+ P DAAR+ Sbjct: 234 QVRLLEARHLLIAESGNATRVAFAVGYESASQFSREYARHFGLPPARDAARL 285 >UniRef50_C6D3S9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S9_PAESJ Length = 323 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 81/292 (27%), Positives = 147/292 (50%), Gaps = 1/292 (0%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L ++ +E S ++P + ++ R P + P ++ G K Y+ + +F Sbjct: 25 QLIGMTERMTLEEGRNSTIVPFLSIVKRSRDTVRCPGVLTPSFCLILQGEKKLYLGQDIF 84 Query: 88 RYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 Y A +Y+ + +P + AT E P GLR++ ++ ++++ + Sbjct: 85 HYSAGDYVASLLDIPAFGQVVGATEEKPYIGLRVDFTTQEIASVVVEAEILAESKEKDLT 144 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 S +L RLL ++++P +AR L + + +E+++ +L+G G + V Sbjct: 145 SAAFIGKSDANLLDIFYRLLKLIDKPKEARFLSELLKKEMIFNLLSGDFGHLFMQKVLFG 204 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 +++ + I+ YT + +VE+LA NMS S HH FK++T+ PLQY K RL + Sbjct: 205 QRADGVAKAIHWIQENYTHSFTVEELAKSCNMSTSGLHHKFKAITTMGPLQYQKQLRLQE 264 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 AR +++ + A+ AA+ VGYES SQF+RE++R FG P +D +R G Sbjct: 265 ARRLMLSGPVGATTAALTVGYESPSQFNREYRRLFGQPPLQDIKTLRKASGG 316 >UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q0_PHYPA Length = 263 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 2/255 (0%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLR 119 + +P + I+ G KI + ++Y ++YL +++ +P + + E P +R Sbjct: 3 PICRIQKPSLCIVAQGEKIIILGNESYKYGVSDYLAVSLDVPISGQVIKPSPEAPFLSIR 62 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 L++D ++ E++ + S + ++ +L A RL+ +++ P D L Sbjct: 63 LDLDAGEIFEIMKETHLFPESIEHYPKS-LFVGKMNINLLDAVIRLVRLLDTPKDILALA 121 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 II+EI+Y +LT G + + +HF+ I+ V++RI+ + + L + +LA ANMS Sbjct: 122 PLIIKEIIYRLLTEKEGDVFKQIATSGSHFATIAEVVERIKTNFDKPLRINELAQIANMS 181 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S+ + +FK VT+ +P+QY K RL + R ++I D + A VGYES SQFSRE+ R Sbjct: 182 TSSLYRHFKQVTAMTPVQYQKQLRLQEGRRLLITDKYNVADVAFHVGYESPSQFSREYAR 241 Query: 300 YFGVTPGEDAARMRA 314 FG P D RM++ Sbjct: 242 LFGCPPTTDILRMQS 256 >UniRef50_Q15TL4 Transcriptional regulator, AraC family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15TL4_PSEA6 Length = 301 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 96/293 (32%), Positives = 161/293 (54%), Gaps = 11/293 (3%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPF-ARTPVMYEPGIIILFSGHKIGYINERVF 87 L KV +L E + +P + L +TP + PV+Y+P I ++ G K Y+ + + Sbjct: 4 LIKKVFELAPHEGDFNTSVPHLSLFRRDTPTTSPMPVIYQPSIYMVLLGSKAAYLGKERY 63 Query: 88 RYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM-- 144 +YD YL+ VPLP E + A+ + P R++++ + ELLM + ++ + Sbjct: 64 QYDPMHYLVSCVPLPLEGQILQASEQRPYLAARISLETHMINELLMQMPDEPEAPVTAID 123 Query: 145 -------AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 ++ GI + ++ +I RLLD A +LG+ ++E++Y++L G Sbjct: 124 IQSNDGTSSRGIYVSKMNTDIQHTLSRLLDCAHSTTKAHVLGQLALKELIYHILNAEHGS 183 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 L A + I+ VL+ I Y ++ + LA++ANMS S+F+H+FK+ T+TSP+Q Sbjct: 184 LLRAFACQDRQQYHIANVLQFINRHYASSMDIATLASKANMSESSFYHHFKAATNTSPIQ 243 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 Y+K RLH A+ ++ + A++AA VGY SASQFSRE++R F V P +DA Sbjct: 244 YIKMVRLHAAKRKMMFEQHNATSAAFEVGYTSASQFSREYRRLFSVPPAQDAR 296 >UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteobacteria RepID=B9JBG2_AGRRK Length = 333 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 2/274 (0%) Query: 41 NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 + ++ P ++Y P + ++ G K +++RV Y + L++++ Sbjct: 57 GVFWTGIDGFCVMRSSEPKMPHKMIYRPALCVIVQGAKQLMLHDRVIDYAEMQALIISIE 116 Query: 101 LPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEIL 159 LP A+ E P + L D+ ++E++ + + A GI LS+ + Sbjct: 117 LPAAGRVIEASPEKPYIAISLEFDVGMMREVMEQL-DVPPKPTGGAGLGIFVEDLSQPLA 175 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI 219 RL ++ P +L I+REI +++LTGP GG + LV + I+ ++ + Sbjct: 176 DCLVRLTGLLATPRAIPVLHPAIMREICFWLLTGPNGGEVCKLVLPDSQTRRIADAIRLL 235 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 + + E + +EQLAA A MS S+FH +FK++TS +PLQY K RL +AR +++ Sbjct: 236 RDNFAEPVRIEQLAAAARMSPSSFHQHFKTLTSMTPLQYQKQMRLLEARRLMVAGSANVE 295 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 AA RVGYESASQFSRE+ R FG P D +R Sbjct: 296 NAAYRVGYESASQFSREYTRMFGAPPKRDVTELR 329 >UniRef50_B1K2F3 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=B1K2F3_BURCC Length = 299 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 152/292 (52%), Gaps = 3/292 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E +A + + + + + + + L+ T P +Y P + ++ GHK + Sbjct: 2 ETLTEIASVIARHVSMDGFQATPIKRMTLVRSSTVTMPMPNVYRPQLCLVAQGHKEVTLG 61 Query: 84 ERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 +RV +Y Y ++T LP AT + P L L+ D + L +L + + Sbjct: 62 DRVLKYAPGRYGVVTYDLPATGRVVDATPDKPYLCLYLDFDPVMLADLALRVPPLPEAPS 121 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 G + +L AA RLL +++ P +LG +EILY++L GP G + + Sbjct: 122 PPV--GKTVSDAGAALLDAALRLLRLLDNPAALPVLGPLAEQEILYHLLAGPDGARMRHI 179 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 + Q + + R + + + E S+++LAAEA MS S+ H +F++VT+ +PLQ+ K Sbjct: 180 TAGQGRVAQVGRAIAWLGKHFRERFSIDRLAAEAGMSPSSLHEHFRAVTAMTPLQFQKQL 239 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL +AR +++ + + AA+RVGYES SQFSRE++R+FG +P D R+RA Sbjct: 240 RLQQARSLMLVHDIDVTTAAIRVGYESPSQFSREYRRHFGESPARDITRLRA 291 >UniRef50_A3M8D5 Transcriptional regulator AraC family n=10 Tax=Acinetobacter RepID=A3M8D5_ACIBT Length = 297 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M++ ++ + L + L +E + ++ L+ + V+ EP I+++ G K Sbjct: 1 MQQNDLTKSLVEAFLYLAPQEGLYPTHISNITLMRVDHSTQPVAVLQEPSIVLVIQGVKR 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG---- 135 YI + +F++ + L +++ +PF+C+T E P+ + + + + EL + Sbjct: 61 AYIGKDIFKFQQGQCLFISIAIPFDCDTLVERE-PMLAIAIKFEPQMMAELATKMDKEHR 119 Query: 136 ---EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 ED + + G+N ++ I A RLL+++ D ILG+Q+ RE++Y VL Sbjct: 120 PLIEDFDNKEIKLSCGLNIIEMNSVISDVALRLLNLLRSKQDTAILGEQVKRELIYRVLQ 179 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 + L + + +I + + I+ Y NL+V++LA +A MSVS FH FK VT+ Sbjct: 180 AGGSDFIQNLSAIMSRSGVIYTICEIIQRDYYRNLTVQELAKQAGMSVSLFHQAFKKVTN 239 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 SPLQY+K RLHKAR +I+++ M + AA VGY SASQFSREFKR FGV P Sbjct: 240 YSPLQYIKITRLHKARDLILNNQMGVAEAAYEVGYVSASQFSREFKRLFGVPPK 293 >UniRef50_Q089X8 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=Q089X8_SHEFN Length = 289 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 109/292 (37%), Positives = 165/292 (56%), Gaps = 7/292 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 EI L+A +L KE L V + AR P+ Y G++I+ G K Y Sbjct: 1 MNEIATLMA----QLAPKEGVNDTHLSGVHVFRSSQYGARGPMCYSQGVLIVGQGKKRVY 56 Query: 82 INERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ---ELLMDIGEDE 138 ++ + F YD L++TVPLP ECET+A+ E P+ L +++D++QL L+ + + Sbjct: 57 LDNQTFEYDRQHSLVMTVPLPVECETFASIEEPVLVLMVDIDLVQLNYIIRLMDEHHQIP 116 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 SG A +E++ C RLL ++ PL+A+++G+ ++ E+LY +L P Sbjct: 117 KDLNESRQSGFFVADNTEDMDCCVIRLLQALQSPLEAKVMGEALVLELLYRLLDSPDAAP 176 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L AL T S + + L I Y E++ V+ LA+ NMS SAFH +FK VT++SP+QY Sbjct: 177 LYALSLSHTRLSRVEKALNYIHKHYGESVEVDTLASLVNMSPSAFHRSFKEVTASSPIQY 236 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 LK RL+KA+ ++ +K + +VGYES +QFSREFKRYF +PGE A Sbjct: 237 LKKIRLNKAKALLQLQNLKVKEVSTQVGYESTAQFSREFKRYFDQSPGECAR 288 >UniRef50_A8APL9 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8APL9_CITK8 Length = 331 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 5/319 (1%) Query: 1 MLQNCAQSNCRIIPKKLRDMK-REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPF 59 ML++ + R P+ R + + + KV + + P + + P Sbjct: 1 MLRSLTMLDHRPNPQDDRLRQDTASLRHEITAKVRTYTEHQERVVCPFPGLSVAELHGPM 60 Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGL 118 +Y+P + ++ G K + + + Y+ + +LL V LP E A++E P L Sbjct: 61 PPLSYIYQPSVSLILQGEKRVTLGDTAYVYNESRFLLTAVNLPTVAEVMQASAERPFISL 120 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 L +D+ +E+L+D+ + + A G++ + + A R + + ERP D + Sbjct: 121 LLELDLSVAREVLVDMEQHGNDV-GFAGEGLSLSHADRFLFDAILRYITLAERPQDKGYI 179 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 G I REILY +LT P G L V + IS + + Y++ L +E LA A M Sbjct: 180 GNLIQREILYRILTSPAGMTLRETVLTGSSSQRISSAINWLRTHYSQPLKMEDLAGIAGM 239 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 VS HH+F+ +T+ SPLQY K RLH+AR +++ D + AS AA+RVGYES SQF RE+K Sbjct: 240 GVSTLHHHFRRMTNMSPLQYQKQLRLHEARRLLLSDNVDASTAAIRVGYESVSQFHREYK 299 Query: 299 RYFGVTPGEDAARMRAMQG 317 R FG+TP D ++++++G Sbjct: 300 RLFGITPIGD--KVQSLKG 316 >UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08YF3_STIAU Length = 336 Score = 278 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 3/297 (1%) Query: 19 DMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 D +E+ L + + + + ++P + L+ P M +P ++ G K Sbjct: 32 DADTQELLARLTAQFLRRTPSDGETTTIVPGLTLMRLSGPTVVQRGMLKPSFCVVAQGEK 91 Query: 79 IGYIN-ERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGE 136 IG + RY A ++L ++ +P + A+ P + + +L D Sbjct: 92 IGQAGADTTIRYSAGQFLASSINMPVAGQVLHASKARPYLAAVFELCPADVLSVLADAKI 151 Query: 137 DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + T +L R + ++ +AR + RE++Y ++TGP Sbjct: 152 QVDATAPCCPATF-VGTADARLLDVVLRSVSSLDDEREARFFAPLLRRELIYRLVTGPSA 210 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 A+ + + R ++ I+ + + L +++LA NMS S+ HH FK+ PL Sbjct: 211 FAVAQSALQSRPDDGVGRAVEWIKTHFAQPLVIDELAKHVNMSTSSLHHKFKATVMMGPL 270 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 QY K RL +AR +++ A+ AA VGYES SQF RE++R FG +P D RMR Sbjct: 271 QYQKRLRLEEARRLLLSGLADATRAAFDVGYESPSQFIREYRRLFGTSPMRDVKRMR 327 >UniRef50_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAD1_9RHOB Length = 294 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 101/283 (35%), Positives = 160/283 (56%), Gaps = 3/283 (1%) Query: 24 EICRLLADKVNKLKNKENSL--SGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 + + + D ++ +++ LP VR+ + P R P++Y III+ G K Y Sbjct: 3 TLRQPMNDLIDHFHMGDDNAIAETSLPGVRVFHSTVPLPREPLVYGSSIIIIGQGRKSLY 62 Query: 82 INERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + + F+YD N YL++ +PL FEC T A+ E PL+GL +++D L EL+ + +D Sbjct: 63 LGDLSFQYDENNYLVVGLPLAFECSTEASPENPLSGLVVDLDTSLLLELINKV-DDPVVS 121 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 + G +S+ + ERL + P+D +LG ++RE+ Y L G L Sbjct: 122 NTTTKLGAEPVAMSDHMQDVVERLTACLLSPVDTSVLGAGLVRELHYRALNDRHGSVLRM 181 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 L ++ + I+RVL+++ SV+QLA E MS SAF+ F+S T +P+QYLK Sbjct: 182 LSNQGNPSARIARVLQKLSGNLAGKYSVDQLAKEIGMSSSAFYRAFRSTTGETPVQYLKK 241 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVT 304 RL+ AR +I+++G +A+ AA +VGYES SQFSR+FK +FG T Sbjct: 242 LRLNHARSLILYEGKRANEAATQVGYESLSQFSRDFKVHFGTT 284 >UniRef50_A6FZ93 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZ93_9DELT Length = 301 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 91/287 (31%), Positives = 140/287 (48%), Gaps = 8/287 (2%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L V + + + + + L P R P +Y + + G K Y+ + Sbjct: 5 RLRALVERHAGPDGLSATPIAGLSLFRVNQPVERLPAVYPASMCCVAQGSKRAYLGGVAY 64 Query: 88 RYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLM---DIGEDEHFQPS 143 YDA+ YL + +PLP E E A+ + P+ G+ L++D + E L+ Sbjct: 65 TYDADHYLCVAMPLPVEAEVPVASPDEPVLGVLLDLDTPAMAETLVAYEAAARPRSASTR 124 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + G+ L A RLL++++ P+ R+L K +RE+L+ +L G G + Sbjct: 125 ALSPGLAVVEADAAFLDAVVRLLELLDNPVALRVLAKGRMRELLFTILAGQAGPLMRQSF 184 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 I+RVL I + LSV++LA A MS + FH F++ TS SPLQ++K R Sbjct: 185 ---GAAQDITRVLHHIREHLHDPLSVDELAQRAGMSRAVFHRRFRAATSFSPLQFIKALR 241 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 L A M+I+ G S AA VGY SASQFSREF+++FG +P A Sbjct: 242 LSHAAMLIV-GGQAVSQAADAVGYTSASQFSREFRKHFGDSPRRWAK 287 >UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWP6_DESAD Length = 302 Score = 277 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 174/300 (58%), Gaps = 2/300 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 ++ +++ L + ++ +E L +V L+ ++P++YE I GHKI Sbjct: 3 IQDKKLLDELKEALDDGAVREGINETFLEEVTLVRVSEHKPKSPLIYEQCFCIAVYGHKI 62 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG--ED 137 ++++ F Y +E+L++ +P + E + PL + + +D +Q+L+ I + Sbjct: 63 CHLSDATFTYGEDEFLVVPAIVPLDIEVVPDVDNPLLSITVPLDFEVIQDLVEFINKYDK 122 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 + + ++SGI L+ ++ + RLL V++ +A I GKQIIREI Y++L G G Sbjct: 123 QALEKISSSSGIYFEPLTNNVMESTIRLLKVLKSRKEANIFGKQIIREIYYHILMGKHGH 182 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 L + ++ ++LI++ L+ + + Y + + ++ LA ANMSV +F+++FK+VT+ +P+Q Sbjct: 183 LLASAAFGESDYALIAKSLRFLHDNYDKGIDIDHLAKSANMSVRSFYNHFKAVTALTPVQ 242 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 YLK RL KAR ++ G +AS+AA VGYES SQFSREFKR+FG TP E + M G Sbjct: 243 YLKRIRLEKARQFMVVQGEQASSAAHMVGYESPSQFSREFKRHFGYTPREAVRNSQGMAG 302 >UniRef50_A9GMF7 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9GMF7_SORC5 Length = 310 Score = 276 bits (707), Expect = 6e-73, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 3/295 (1%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 + + R + D +K N + +P +R++ P +Y P + ++ G K Sbjct: 1 MDNLRRAVRDYASKHANGDGLALTKVPGLRMMCVHAPSGPLHSIYRPLVCLVLQGAKRML 60 Query: 82 INERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 + E +++T +P A+ P L + +D+ ++E+ G Sbjct: 61 VGSEERIVSRGESVIVTADMPVTGRIVQASQSEPYLALAVELDVALIREIAS--GLSSTA 118 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + A + A + E +L A RL+ ++ RP +L I RE+ Y++L+GP G L Sbjct: 119 EDGSKAPPLLVANIDEVVLDCALRLMRLLGRPEAIPLLHPGIARELHYWLLSGPHGAVLR 178 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 AL + S ++ + + +Y + V +LA A MS +AFH FK +TS +P+Q+ K Sbjct: 179 ALSLPTSSASRLAAAVAMLRAEYRTRIPVRRLAKSAGMSSTAFHVQFKRLTSLAPIQFQK 238 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 RL +AR +++H+G+ A+AAA VGYESASQFSRE+ R FG P DA R R+ Sbjct: 239 RLRLMEARRLMVHEGVSATAAAFEVGYESASQFSREYARLFGAPPKRDALRARSA 293 >UniRef50_Q2S734 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S734_HAHCH Length = 304 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 149/289 (51%), Gaps = 5/289 (1%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + LA + + + +P + + +P +++P + I+ G K E++ Sbjct: 9 KELARLIQRHCPTDGVRESDIPRLSFIRSSSPTEPVLAVHQPAVCIVAQGAKKVISGEQL 68 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 F+YDA YL+++V LP + A+ E P +RL++D+ L EL++D G ++ P Sbjct: 69 FKYDAAHYLVVSVDLPIAGQVMQASPEQPYLCVRLDLDLTILSELILDEGSVDNSAPH-- 126 Query: 146 ASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 + + ++ +L A RL+ ++ + P D +L +EILY++ G GG L + + Sbjct: 127 -QSVGVSLVTPRLLEAVIRLVALLNDNPKDIAVLAPLAEKEILYWLANGDQGGILREITN 185 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + IS+ ++ I+ + + +++L MS S+F H+F++ T +PLQY K RL Sbjct: 186 GDSRIRQISKAIQHIKTTFDQPFDMDELLKLTCMSASSFFHHFRTATHMTPLQYQKQLRL 245 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +AR + VGY+S SQFSRE+ R FG+ P +D AR++ Sbjct: 246 LEARRRLFLGEQDICNIGYGVGYDSPSQFSREYARLFGLPPSKDLARIK 294 >UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q880S7_PSESM Length = 313 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 5/303 (1%) Query: 19 DMKREEICRLLADKVNKLKNKENSLS---GLLPDVRLLYGETPFARTPVMYEPGIIILFS 75 + +E + L + K+ + +PD+ + T +YEP + I+ Sbjct: 9 PAEPDERLQALKRLIGKVTPQIGLNDVCKTSIPDLTFYRMDKLATPTYCIYEPCVAIILQ 68 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMDI 134 G K E+ + + + +V +P A SE P + L +D+ L +++ Sbjct: 69 GAKEITFGEQACEFAQGSFFVTSVDIPTLARVTAASEQTPYLSIVLKLDLSMLNDVIQTQ 128 Query: 135 GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 + + + A G S S E+L A RL + +PL+A ++ I REI +L Sbjct: 129 APLKQ-EATPEARGFASGMASSEMLDAFARLSALTGQPLEAGLMSDLIKREICVRLLLSC 187 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G L ++ I R ++ ++ Y E L V QLA + M+ S HHNF+ +T TS Sbjct: 188 AGQWLRSVTRDGYRDKGIVRAIEWLKLHYDEPLHVAQLAQLSGMASSTLHHNFRKLTGTS 247 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 P+QY K+ RL AR +++ + + + AA+RVGYES +QFSRE+ R FG P D R Sbjct: 248 PVQYQKSLRLQAARSLMLTERVDVNTAALRVGYESVAQFSREYARRFGAPPSRDIKYARE 307 Query: 315 MQG 317 G Sbjct: 308 AGG 310 >UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1Q9Q6_PSYCK Length = 284 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 86/279 (30%), Positives = 147/279 (52%), Gaps = 4/279 (1%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 +++ K+ K ++ +P++ + P + EP I I+ G + Y+ + ++D Sbjct: 7 EQLLKILLKNKTIESTIPNLFFYCADRPSKTVSYIQEPSICIVLQGEREIYLGKDCQKFD 66 Query: 91 ANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 + + V +P +A+S+ P+ L + ++++ +QE+L I + + GI Sbjct: 67 NSSLMFCPVDIPLSMHIKHASSDHPVIVLSMKLNLVMIQEVLARIPPQQQVKEGYL--GI 124 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF 209 L + I+ A ERL+++++ P D L I +EI Y +L+ G L LV +H Sbjct: 125 K-WQLDDAIMQAFERLVNLLDCPNDTGFLSSLIQQEIYYRLLSAQQGNKLRQLVINGSHT 183 Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 I++ ++ E + + LA+ MS+S FH +FK +T SPLQY K RL +AR Sbjct: 184 HRIAQATDWLKAHLDEPVVIGDLASRCGMSISGFHQHFKEITQLSPLQYQKKLRLMEARR 243 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 +II + + S AM+VGYES SQFSRE+KR FG +P D Sbjct: 244 LIITNDSQISQIAMQVGYESPSQFSREYKRLFGNSPNSD 282 >UniRef50_Q021L8 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021L8_SOLUE Length = 316 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 4/289 (1%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + R + + ++ + ++P V L+ P + ++ G K Sbjct: 12 NSLWREARSILVRHCEEDGLFTAVIPGVHLMRFGWRSQPLVATQFPCMAMVIQGTKSVEF 71 Query: 83 NERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 E Y A +YLL ++ +P A+ PL + + +D +L+E++ + Sbjct: 72 GETNLEYGAGQYLLTSIDVPATSRIVNASKARPLLAVGVQIDFAELKEVIR---RCDAMP 128 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 GI EIL A RLL +++ P ++ L I +EILY +L+G G LL Sbjct: 129 QLNTQPGITIFDADLEILDAVVRLLRLLDTPEHSKPLAPLIRQEILYRLLSGRSGSRLLE 188 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + + I+ V I+ + E+ VE LA MS S+FH +FK+VT +P+QY + Sbjct: 189 ICRSGSPSNRIAEVTGWIKKHFAESFLVEGLAHHVGMSPSSFHQHFKAVTGMTPIQYQRR 248 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 RL +AR ++ + + A++RVGYES SQFS+++++YFG P +D A Sbjct: 249 IRLQEARKSLLMEAINIGEASVRVGYESHSQFSKDYRQYFGRLPKDDIA 297 >UniRef50_B2IB97 Transcriptional regulator, AraC family n=5 Tax=Rhizobiales RepID=B2IB97_BEII9 Length = 318 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 97/281 (34%), Positives = 149/281 (53%) Query: 38 NKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLL 97 + S L VR+L E PV+Y+PG I + G K G + V+ YD YL + Sbjct: 36 PHQGYNSTPLQGVRILRTEAVLHDVPVLYKPGAIFVLQGRKQGVLEGEVYLYDEEHYLAV 95 Query: 98 TVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEE 157 +VP+PF E+ A+ E PL + + D+ E+ ++G + S+ + Sbjct: 96 SVPVPFRMESVASPERPLLAVYVEFDMRLAAEIASEVGARHARSTVGKVKSLVSSRMEPA 155 Query: 158 ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLK 217 I RLL + P++ ILG I+RE+ Y VL GP GGA+++ + + I + L Sbjct: 156 IEDVVLRLLRALHDPVELTILGSGILRELHYRVLVGPQGGAMISALQQCGTSGRIVQSLA 215 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 R+ Y+ + V LA EA MSV ++H +FK++T +SP+QY+K RLH+AR+M+ Sbjct: 216 RLRETYSSEILVAALAGEAGMSVPSYHVHFKALTGSSPIQYVKAMRLHEARLMLARQDKT 275 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A VGY S +QFSR+FKR+F T E+A +R G Sbjct: 276 IAEVAASVGYASPAQFSRDFKRHFRRTASEEAEWVRRHLGE 316 >UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPQ1_9DELT Length = 313 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 2/296 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 +E+I L D + + + + L+ E P A P + ++ G K Sbjct: 8 IKEDILAALKDILMRHLPAPEIRPSPIDGLVLVRREDPPAPDRCFERPLVSVIVQGSKRS 67 Query: 81 YINERVFRYDANEYLLLTVPLPFECETYAT-SEVPLAGLRLNVDILQLQELLMDIGEDEH 139 I + F + ++L+ + +P + T P L +D L +L++ + Sbjct: 68 LIGSQEFVFRRGQFLVSGIDMPSSSSFFDTAPGQPFLSLFFYLDRQILTDLMLRM-RPAG 126 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 P G+ A E L A RL +++++P I I++E+ Y +L GP G L Sbjct: 127 KAPQEDGPGVAVADAEPEFLEAVLRLAELLDKPEQIAIRAPMILQELHYLLLIGPLGHVL 186 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 L ++ + S + + + + + +E LA + MS+S H +FK+VT SPLQYL Sbjct: 187 RGLYAQGSQNSQVLQAVSILRRDLGAPVRMESLARQVGMSLSTLHRHFKTVTGLSPLQYL 246 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 K RLH+A+ +++ + M+A++AA+ VGYES +QFSRE+KR FG P D R R + Sbjct: 247 KQLRLHEAQRLMLMEDMRAASAALSVGYESVTQFSREYKRMFGEPPHRDIQRKRTL 302 >UniRef50_A3YHM2 Putative transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YHM2_9GAMM Length = 293 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 3/292 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M E+ L + ++ LS +PD + + P +Y P I+ G K Sbjct: 1 MTLAELLALATHYIESQTMDDDELSSPIPDFFVHQSKKPTQLNACIYHPIACIILQGSKE 60 Query: 80 GYINERVFRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + Y A L+ + +P F A+ E P GL + +D+ L+ L +IGE + Sbjct: 61 AIVGGEKISYRAGMSLIASHSVPAFSSIVEASEEAPYIGLAICLDLGILRSLQREIGELD 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + + +A S+ ++ A R + +PL+ +++G I++EI + +L G Sbjct: 121 ILNKTFKP--LCAAQSSDALIDAMGRYFALAGKPLEMKVMGPLILKEIHFLLLKSSNGDM 178 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L + +H S +++ + I + LS+ +A MS S+F+ +FK VT ++PLQY Sbjct: 179 LRHLTEQDSHVSKVTQAIDVIRQNFKTALSMPDIAKNIGMSTSSFYEHFKQVTKSTPLQY 238 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K RL +A+ +I + SAAA VGYES +QFSRE+ R FG TP ++ A Sbjct: 239 QKELRLIEAQRLIREENTSVSAAAFEVGYESPTQFSREYSRKFGNTPRQELA 290 >UniRef50_A3QEE9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica PV-4 RepID=A3QEE9_SHELP Length = 299 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 146/294 (49%), Gaps = 2/294 (0%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + + LAD +E +PD+ L TP +Y + ++ G K I Sbjct: 7 NSMIQSLADTAFAYGRREGDHDTSIPDLTLHIRNTPTEPLHCIYTLSLSLILQGSKQVAI 66 Query: 83 NERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 ++R+ A + +L T LP T AT P GL L +D + + ++ + + Sbjct: 67 DDRLRICSAGQSMLTTFDLPVISHVTEATRYHPFIGLVLKLDYGLIAQTCTELNLERPSK 126 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 + I++ + + A RLL + P L + +EI+ +L G G L Sbjct: 127 -DLRYQAISTQDIDTGLCDAMSRLLGLHLTPEYIESLAQLYKKEIVIRLLHGSHGMHLRH 185 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 L S + I +++ ++ + + + + +LA +A+MS SAF +FK++T +SPLQYLK+ Sbjct: 186 LASVGSPSRQIVQIVAWMKQNFAQAIGINELADKAHMSASAFRQHFKALTGSSPLQYLKH 245 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 RL +AR ++ +G+ AS A+ VGYES SQFSRE+ R FG+ P +D R+R Sbjct: 246 LRLQEARDQMLLNGLDASQASGVVGYESPSQFSREYSRLFGLPPQKDIQRLRQA 299 >UniRef50_Q65QP8 AraC protein n=7 Tax=Pasteurellaceae RepID=Q65QP8_MANSM Length = 302 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 142/277 (51%), Gaps = 2/277 (0%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 ++ + + + + + + + PF+ V+ EP I I+ G + + + + +D Sbjct: 25 ARLLDVIPHNQTYHSPIKGLIIHHSDHPFSYDNVIQEPSICIVIRGEREVQLGNQCYLFD 84 Query: 91 ANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 ++ V +P + AT+E P + + +D+ + ++L++ + S + Sbjct: 85 NRHFMFCPVNVPMCGKVLQATAEEPFVVMSMKIDLQAVNKILLE-QTALLAKNSENPTAF 143 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF 209 L E+ A ERLL + E D L I +EI Y +LTG G L +VS ++ Sbjct: 144 GQWHLDAELENAFERLLLLHENTKDITFLAPLIQQEIYYRLLTGEQGDKLKQMVSFGSNT 203 Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 I++ + ++ Y E ++VE LA MS+S FH++FK T+ SPLQY K+ RL +A Sbjct: 204 QKIAKATEYLKAHYIETITVESLAELCGMSLSGFHNHFKKHTTLSPLQYQKSLRLMEANR 263 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 +I + + S AA +VGYES SQFSRE+KRYFG P Sbjct: 264 LISQENLPISTAAFQVGYESPSQFSREYKRYFGKAPS 300 >UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM7_9GAMM Length = 309 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 5/303 (1%) Query: 20 MKREEICRLLADKVNKLKN---KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 M + + R +AD +L KE+ + D+ L++ P P++Y P + + G Sbjct: 1 MSDQYLTRRMADLTQRLLPLLTKESLTQTAIDDISLMHLSNPSQVRPIIYRPAVCFMLQG 60 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG 135 K + Y+ YLL+ V P A+ + P GL N D +L+EL++ +G Sbjct: 61 AKELLVGNTKVTYEQMNYLLIPVVFPVSGRVSQASPDNPYVGLSFNFDTAELRELILLLG 120 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 D + S + + E++ ER +++E+P DA++L I RE++Y +L G Sbjct: 121 -DRIPATVKSQSSLCVGKVDSEMMQLLERATELLEKPDDAKVLFPLIRRELMYRLLLGEL 179 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 GG L T S I++ + I+ + E L V+ LA+ ++S SAF+ FKSVT+ SP Sbjct: 180 GGLLRDFNLIDTQASRIAQAIDIIKRRLHEPLRVKDLASAVHLSESAFYQAFKSVTAMSP 239 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +Q+ K RL +AR +++ +G S A +VGYES SQFSRE+ R FG +P D R Sbjct: 240 IQFQKKLRLDEARRIMLFEGSDVSTACYQVGYESPSQFSREYSRLFGQSPKADINDFRIS 299 Query: 316 QGN 318 G+ Sbjct: 300 SGS 302 >UniRef50_A6WBM1 AraC-type transcriptional regulator domain protein n=5 Tax=Actinomycetales RepID=A6WBM1_KINRD Length = 330 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 10/310 (3%) Query: 8 SNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE 67 + R L M E+ +L+ + + + + V TP A M Sbjct: 20 AQERRAGGSLTGMSLAELRQLITRHASP------ATTTAIEGVHAARTTTPAAPAASMDG 73 Query: 68 PGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQ 126 + ++ G K +++R RY A +Y++ ++ LP + T A+ P G L + Sbjct: 74 AVLAVIAQGEKTLVLDDRELRYGAGQYVVASLDLPVTGQFTGASEAEPALGFGLALKPAL 133 Query: 127 LQELLMDIGEDE---HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 + ELL+ E + + A + ++L A R+L ++ERP D +L I Sbjct: 134 IAELLLHPAARELPGTGRGAAAPFALTIGDAGSDLLDAVVRMLRLLERPRDRVVLAPLIE 193 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 REIL+ ++TGP G A+ L + S ++R ++ + Y + L V++LA A MS SAF Sbjct: 194 REILWLLITGPHGEAVRQLGLADSSLSNVARAVRWLREHYAQPLRVQELAQVAAMSPSAF 253 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 H F +VTS SP+Q+ K RL +AR+ ++ D + A VGYESASQFSRE++R FG+ Sbjct: 254 HRAFAAVTSMSPIQFQKRIRLQQARLRLLTDPADVAGAGHAVGYESASQFSREYRRLFGL 313 Query: 304 TPGEDAARMR 313 PG+DA R+R Sbjct: 314 PPGQDATRLR 323 >UniRef50_C6ARF9 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=C6ARF9_RHILS Length = 306 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 153/290 (52%), Gaps = 5/290 (1%) Query: 31 DKVNKLKNKE-NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRY 89 DK+ + + S LP + + P++Y+P ++ G + +I +++F Y Sbjct: 6 DKIRAMAMRHAGRQSPQLPRLFAYTLDHTTEIDPLIYDPAASLVIQGTQRMFIGDKMFEY 65 Query: 90 DANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 + +++ + + A+ + P + L +D L +L++++ SG Sbjct: 66 GPGQSMIVAAEIAALGQICEASEDQPFLAVGLFLDPALLSDLVLEMA---AIPELPIESG 122 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 +T S +L A RLL++++RP + ++ + + E+++ +L GP GG L +V + Sbjct: 123 YGVSTASASLLGAWGRLLELLDRPTEIPVMAQSLEHELMFRLLMGPHGGLLRQIVGSDSR 182 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 I + + I + YTE L+ + +AA A MSVS F+ FK+V + SPLQY K RLH+AR Sbjct: 183 LMHIRKAMAWIRDHYTERLNFKAVAALAGMSVSVFYDRFKAVAAVSPLQYQKYIRLHEAR 242 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 +I + + A+ VGYESASQFSRE+KR FG PG+D R +A G Sbjct: 243 RRMIANQVSAAEVGFAVGYESASQFSREYKRLFGAPPGQDTERAKAGLGG 292 >UniRef50_B0C5B1 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B1_ACAM1 Length = 291 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 157/291 (53%), Gaps = 6/291 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + + +++ E + + ++L R P +Y+P I ++ G K Y++ Sbjct: 4 IIELIDRHAISEGATETPIEGLQLFRTNHLVERLPGVYDPSICVIVQGQKRAYLDGTTHI 63 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA-- 145 YD ++YL T+P+P E E A+ E PL GL L ++ + E ++++ + S A Sbjct: 64 YDRDQYLCSTLPIPAEAEVVEASPEKPLLGLLLRLETRTMFETVLEMTALDRGSASRAEV 123 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ A E+ +RLL++++ P+ ILG ++E+++ VL G GGA + + Sbjct: 124 VPGLTVAKWDEDFATGLQRLLELLDDPVALNILGSGRLKELMFAVLRGEAGGAFVH--AF 181 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ISR L + E +S+++LA EA MS + FH FK VT+ SP+Q++K +RL+ Sbjct: 182 GGGMQQISRALTFLNANLHEAISIDELAKEAGMSRAVFHRKFKEVTTYSPIQFIKLHRLN 241 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 +A +I+ G A AA RVGY S SQFSR+F+RYFG +P + R+ Q Sbjct: 242 EASRLIV-SGSTAGDAANRVGYSSQSQFSRDFRRYFGKSPYQWGLEQRSEQ 291 >UniRef50_B8DSD0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSD0_DESVM Length = 299 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 150/289 (51%), Gaps = 2/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 +L +K+ K +++ L + + L + + Y P + ++ G K I Sbjct: 12 AILKEKLLKWLPEQSRLETQIFGLALSRFDQETSAEKCFYHPIVALIVQGFKRSMIGNHD 71 Query: 87 FRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 Y +++ V +P T+A+ + P L + +D + +L ++ + Sbjct: 72 ADYGERHSMVVGVDMPGIFHITHASQQNPFLSLSVRLDRRIISQLATEMPSIVTSD-NKP 130 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 A+ + + SEE+L A RL+D+++ P + I+REI +++L+G G L + Sbjct: 131 ANPVAISEASEELLEAFIRLVDLLDTPSRIPVFAPMILREIHFHLLSGSQGDCLRLFSTG 190 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 T S I++ + + YT +L +E+LA + NM+ S F+ +FK VTS SPLQ+ K RL+ Sbjct: 191 GTQTSQIAQAITWLRENYTGHLHMEELARQVNMAPSTFNRHFKQVTSLSPLQFQKRLRLY 250 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +A +++ +G A AA+ VGYES SQFSRE+KR FG P D A+ R+ Sbjct: 251 EAERLMLLEGKDAGTAAVMVGYESGSQFSREYKRQFGAPPRRDVAQKRS 299 >UniRef50_C9PHT7 Transcriptional regulator AraC family n=2 Tax=Gammaproteobacteria RepID=C9PHT7_VIBFU Length = 296 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 2/297 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + L ++V +KE S +P + + TP A +Y G ++ G K Sbjct: 1 MNSNNANQALVEQVRAYSSKEGSYVTDIPGLEVHIRNTPTAPLHCIYSLGFSLILQGSKQ 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 I++R +A + +L T P T AT P + L +D + + ++ D+ Sbjct: 61 LAIDDRQVPVEAGQSMLTTFDTPIVSHVTEATRHQPFLAIVLKLDYDLIMQTCTELKLDK 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + I+ + + I RLL + + P L I +E++ +L GP G Sbjct: 121 PDR-HFEYQSISIQNMDDGIYRTMSRLLALEQEPEYLASLVPLIKKELVIRLLHGPHGTQ 179 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L + S + + I +++ ++ +TE + + +LA +A+MS S+F +FK++T +SPLQY Sbjct: 180 LRHIASVGSPSNHILKIVTWMKKNFTETVGMNELAGQAHMSASSFRVHFKALTGSSPLQY 239 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +KN RL +AR ++ +G+ A+ A+ VGYESASQFSRE+ R FG+ P +D R+R + Sbjct: 240 MKNLRLQEAREQMLLNGLDATQASNLVGYESASQFSREYSRLFGLPPQKDIQRLRQI 296 >UniRef50_Q0SK59 Transcriptional regulator, AraC family protein n=2 Tax=Corynebacterineae RepID=Q0SK59_RHOSR Length = 307 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 80/275 (29%), Positives = 140/275 (50%), Gaps = 2/275 (0%) Query: 42 SLSGLLPDVRLLYGETPFA-RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 L + + L A + EP ++I+ G K + +R++ Y A + L++T Sbjct: 22 DLQTPIDGLLLSKVTAESAAPEYSLTEPLLVIMTQGGKRLLLGDRLYEYRAGQCLVVTAS 81 Query: 101 LPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEIL 159 +P + P + L + + L++ + + + I + +L Sbjct: 82 VPVTGHYIDISEGAPSLAMGLVLRPAAIAALVLQAPTERWSRGAAGVPAIETGDADVHLL 141 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI 219 AA R+L +++ P DA +L I +EIL+ +LTGP G + + + + +SR + I Sbjct: 142 DAAARMLRLLDHPADAPVLAPLIEQEILWRLLTGPHGSTIRQIGMADSDLAHVSRAIHWI 201 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 + Y+E + ++ LA ++MS SAFH +F++VT+ SPLQY K RL AR M++ + Sbjct: 202 RDNYSEPMRIDDLARLSSMSASAFHRHFRAVTAMSPLQYQKRIRLQHARSMLVAHPGDVA 261 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 VGY+S SQF+RE++R FG +PG+DA +R Sbjct: 262 GVGHHVGYDSPSQFNREYRRLFGASPGKDAHGLRG 296 >UniRef50_A7HDG1 AraC-type transcriptional regulator domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HDG1_ANADF Length = 297 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 96/280 (34%), Positives = 147/280 (52%), Gaps = 3/280 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA + L ++E P V + TP +Y +I++ SG K + E+ F Sbjct: 11 LAAGIAGLAHQEGCSRTRHPGVVVWRMTDAHPPTPTLYAASLILVGSGEKQATLGEQTFA 70 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 Y+A+ L++T PLP C T A+ P+ L + +++ L+EL+++ + + Sbjct: 71 YNADHLLVVTSPLPMLCRTIASETEPVLTLVVEIEMPLLRELILEAPASSPPRWPASTRT 130 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 + LS E+ A RLL + ++LG+Q IRE+L+ VL CG +L A+ + Sbjct: 131 VFRMALSPELEDAGARLLRHLGDDRRTKVLGRQTIREMLFLVLESSCGDSLRAVA--EGT 188 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 S S VL+ + + + VE+LA A+ SV FH FK++T TSPLQY+K RL +AR Sbjct: 189 VSRFSHVLRHMNGNFAGRMKVEELARLAHTSVPTFHQRFKAMTGTSPLQYMKTLRLTRAR 248 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 ++ M A A VGYES SQFSRE++R FG P D Sbjct: 249 QLLREGAM-VKAVAHDVGYESESQFSREYRRLFGGPPSSD 287 >UniRef50_B0T5I6 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T5I6_CAUSK Length = 303 Score = 266 bits (681), Expect = 6e-70, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 142/300 (47%), Gaps = 6/300 (2%) Query: 18 RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGH 77 +K E + + D V + + + L P +P + ++ G Sbjct: 3 HGLKMEPLLDRMRDLVLRHAEG-LQFVTAVESLSLGVLRQPLVPEFFFSDPMVCVVLQGA 61 Query: 78 KIGYINERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDILQLQELLMDIGE 136 K + R+ RYD + + LP C A + P + +++D L EL++ Sbjct: 62 KQVLVGGRLLRYDPSHSFASVIGLPATGCVLEAAPDKPYVAIGMSLDRTILAELVLAAPR 121 Query: 137 DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 Q A+G AT+S +L A L +++ P D L K RE+ Y +L G Sbjct: 122 GTRPQ---RAAGFGVATVSPGLLEALNSFLSLLDYPEDIPALAKGREREVAYRLLQSEHG 178 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L + + FS I +V+ + ++LS E LA A MSV +FH +FK+ T+ SPL Sbjct: 179 PMLRQAIHVEGQFSKIHQVIAWMRQDLDQHLSGEDLARRAGMSVPSFHRHFKAATAMSPL 238 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 QY K RLH+AR ++I A+ A VGYES SQFSRE+ R FG +P DAAR+R ++ Sbjct: 239 QYRKTLRLHEARKLLI-TNADAAKTAYAVGYESPSQFSREYSRLFGTSPARDAARLRGVE 297 >UniRef50_A0RQF6 Transcriptional regulator, AraC family n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RQF6_CAMFF Length = 297 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 83/287 (28%), Positives = 149/287 (51%), Gaps = 7/287 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 R+EI +L + K K + + + P +YEP I ++ G K Sbjct: 4 RDEILKL----ILKTKANYGEIQTDIKQLSFYTAIKPTEFLNTIYEPSICVIIQGQKAVG 59 Query: 82 INERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 ++ Y+ ++YLL T +P + A+ + P L + + + E++ ++G+ + Sbjct: 60 FGNDLYSYNPHKYLLATTYIPARIQIEKASKDQPYISLVIKLKPESIYEVIKEVGDFKIQ 119 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPCGGAL 199 +G+ + L + +L A + + ++E+P DA L I++EI+Y +L G L Sbjct: 120 NKKNIKNGLCFSDLDDTLLEAIAKFVKLIEKPKNDAEFLSNLILKEIIYLILK-QNGDLL 178 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + + ISR + I+N + EN+++++L+ E +S S + NFK +TS SPLQ+ Sbjct: 179 KQYILEGNLANQISRAIMAIKNSFNENINMKKLSKEIGISESLLYQNFKKITSLSPLQFQ 238 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 K RL +A+ ++I ++AS A +VGYES SQFSRE+ R FG++P Sbjct: 239 KKIRLEEAKNLLISTNLEASQIAFKVGYESPSQFSREYARMFGMSPK 285 >UniRef50_B0S9N6 Transcription regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9N6_LEPBA Length = 295 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 5/293 (1%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 +++ +A+ K +P V ++ GE P + +YEP + ++ G K Sbjct: 1 MQKLVNEIAELCCSATTK--PTLTGIPRVLMIQGEVPEHQLAAVYEPLVGLVVQGGKTIS 58 Query: 82 INERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I ++ + Y ++ +P A + P + L +D L +LL D F Sbjct: 59 IGRQMVPMEGPSYFVIPTEMPATGSVRQAKNGRPYLSVALQLDQKVLLDLLKDTPNTVAF 118 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + ++ + E L R+L +M+ P L REILY+VL GP G L Sbjct: 119 KNDTDE--FSACPATPEFLEVWLRMLRLMKTPEHIAALAPAYEREILYHVLIGPEGWRLR 176 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 L S I + ++ + +T + +E LA +A M ++ FH FKS+T SP+Q+ K Sbjct: 177 QLFQSHQKGSSIHQSIQWVRQHFTHSFEIEDLANKACMGITTFHRQFKSITGLSPIQFQK 236 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL +AR ++ + G + AA+ VGYES SQF+RE+ R+FG +P D R++ Sbjct: 237 QLRLLEARKLLTYSGYSVTDAALDVGYESTSQFNREYTRFFGASPARDTKRLK 289 >UniRef50_Q65QM2 AraC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QM2_MANSM Length = 290 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 5/286 (1%) Query: 29 LADKVNKLKNKENSL---SGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 L + KLK+ E +P++ + + ET + E GI ++ G K + ++ Sbjct: 5 LIRQTLKLKSGEKGTMGIETPVPELFVFHSETDLRDVSQLQESGICLILQGRKDVRVGDQ 64 Query: 86 VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 +RY A E++ TV LP E T + LRL D+ ++E++ ++ ++F + A Sbjct: 65 HYRYQAGEFVCYTVDLPIMTEYL-TDDGGYLDLRLFFDLPLMREIIDELNR-QNFSFAPA 122 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + +T S E++ A E L+ + E D I+ I + I +Y+LTG GG L + + Sbjct: 123 SQQKIVSTASPELIRAFEMLICLTENSQDLPIMLPLIKKAIYFYLLTGEQGGTLRQIALQ 182 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ++ I + ++ Y E+ +EQLAA ++MS+S F+ F+ +T SPLQY KN RL Sbjct: 183 NSNSQRIVETVGWLKEHYNESFDIEQLAAASSMSISGFYAQFRRLTGMSPLQYQKNLRLT 242 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 KA ++ S A +GY+S QFSRE+KRYFG +P D +R Sbjct: 243 KANALLKLGQKNISEIAFEIGYDSLPQFSREYKRYFGHSPRSDLSR 288 >UniRef50_B4Y346 Putative AraC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y346_9BURK Length = 324 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 146/288 (50%), Gaps = 3/288 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + ++ + + ++L+ P V Y P + ++ G K ++N ++ Sbjct: 1 MRALFDRHAPADGFFPSPVAGLQLIRASAPTDPLSVFYRPALCLVLGGRKRVFLNNQITE 60 Query: 89 YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF--QPSMA 145 Y ++ +L+++ LP + A+ P + L + ++ ++++ G + + A Sbjct: 61 YGSDGHLVISQDLPALGQVVEASPLEPYLCVHLRFEQAEINRIVLEHGPPQEPEGASTRA 120 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 A G+ S +L A RL+ +++ P D L I R I++ +L+ G L Sbjct: 121 ARGLYVEPSSAALLDAILRLVRLLDAPADQPTLEPLIRRGIVHRLLSSANGWRLARTART 180 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 I+R L+ + ++ E + V +LA A++S+ A + NFK+VTS +PLQY+K RL Sbjct: 181 GCCDHRIARGLEVLRARFRETIGVRELADIAHLSLPAMNLNFKAVTSFTPLQYVKQLRLQ 240 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +AR +++ M A+A AM +GY+S S+FSRE+ R FG P D AR+R Sbjct: 241 EARRLVVSTEMDAAAVAMTIGYDSPSEFSREYARMFGEPPSRDRARLR 288 >UniRef50_C6ARF6 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=C6ARF6_RHILS Length = 299 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 3/276 (1%) Query: 41 NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVP 100 S L+P + + G+ + P +Y I + G K I + + YD+ +Y + + Sbjct: 19 GSTDTLIPRLDMFVGQDTMGKVPCLYRSMICFILQGSKRVAIGDTLLSYDSAQYFISALD 78 Query: 101 LPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEIL 159 LP + A P + L ++ L EL + + G+ + + Sbjct: 79 LPLTGQILDAGKGRPYVAVSLVLEPGLLAELAATMPSVR--ESDQKGMGVAVNPMIAPLR 136 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRI 219 RLL +++ P D IL I RE+LY +L GP G L + + + + R + I Sbjct: 137 DTLLRLLSLLDNPADIPILSPMIERELLYRLLQGPQGRLLRQIARPEGALARVRRAIAWI 196 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 + L +E L + MS ++ H +F ++T SPLQY K RL +AR +++ G AS Sbjct: 197 RDHPDAQLRIEALCDASGMSRASLHRHFLAITGFSPLQYQKQLRLQEARQLLLAGGHSAS 256 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 AA VGYESASQFSRE+ R FG P MR Sbjct: 257 DAAFAVGYESASQFSREYLRQFGAPPARHVQEMRQA 292 >UniRef50_UPI000197C8CE AraC family transcription regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C8CE Length = 299 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 5/294 (1%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E+ L + ++ + + ++ + P + ++ G K Sbjct: 2 NNELLNLCRHYADARAVFNGVITTPVSGLTIVRSIHQGELQVAVSRPLVAMMLQGRKRVT 61 Query: 82 INERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 F Y E ++++ +P E T A++ P L L +DI L ELL + Sbjct: 62 TGSNSFEYGPGEAMVISADIPIEGLITKASAGEPYYSLVLELDISLLSELLSAM----KI 117 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + + +AS I+ + + A RL+ + E ILGK +IRE+ Y++L G A+ Sbjct: 118 KRNRSASNIHIEPIRTNVADTACRLVRLFEEHEALNILGKGLIRELHYWLLRSEHGEAIR 177 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 AL + +H +SR ++++ N + + +++LA+ MSV FH F+ +T+ +PLQ+ K Sbjct: 178 ALGAMDSHSVKVSRAIEKLRNDFMYPIKIKELASSVGMSVPVFHKYFRLLTTLTPLQFQK 237 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL AR ++ +G+ + AA VGY S SQF+RE+ R F ++PG D RA Sbjct: 238 QLRLIHARNQMLTNGVSITHAASAVGYNSVSQFTREYSRMFNISPGRDNKLFRA 291 >UniRef50_Q1GMB4 Transcriptional regulator, AraC family n=3 Tax=Rhodobacterales RepID=Q1GMB4_SILST Length = 299 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 153/288 (53%), Gaps = 4/288 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + + + D V + + + + YEP + ++ G K Sbjct: 1 MVPKNLISDVFDLVERTGTLGEGCATGVDGLFAFAQTKTTECAAAFYEPIMCLVLQGAKE 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 Y+N RV RY A + L+++ +P E A+ + P L L +D+ + + +IGE + Sbjct: 61 AYLNGRVVRYSAGDTLIVSHAIPVESAVMQASPDAPYTALALRLDLAMARSMNDEIGERD 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 S A +N+A ++ A RL +V + P++AR L I+REI + +L GG Sbjct: 121 D---SANAHSLNAAASDAALIDATHRLFNVSKDPVEARTLAPLILREIHFRLLRAQHGGM 177 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L+++ + S I++V+ + + NL V LA+E MS+SAFH +F+SVT+T+PLQY Sbjct: 178 LRQLLNQDSPASRIAQVIATMRENFKSNLPVADLASECGMSLSAFHEHFRSVTATTPLQY 237 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 K+ RL +AR +++ + ++AA VGYES +QFSREF R FG+ P Sbjct: 238 QKDLRLLEARRLLVTENRSVASAAYEVGYESPTQFSREFSRKFGMPPS 285 >UniRef50_A9D252 Transcriptional regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D252_9RHIZ Length = 296 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 92/291 (31%), Positives = 136/291 (46%), Gaps = 6/291 (2%) Query: 25 ICRLLADKVNKLKNKENSLSGLL----PDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 I + L +V+ L ++ G L LL E P + P +Y P I ++ G K Sbjct: 2 IRKALVTRVSSLLDQSGLREGALFHEDSGTHLLRHEAPTGQNPTVYRPLICLILQGAKEV 61 Query: 81 YINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 N+R A + L+++ LP T A ++P L +D+ L+ L + Sbjct: 62 GTNKRTITVRAGQSLIVSHALPVVSRITEAAPDLPYVALVFPLDLDLLRSLAPAVLPSSV 121 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + S S I+ EEI A R + R+L REI +L GP G L Sbjct: 122 SRASEPFS-IHLCDTDEEIEDALWRYFSQCDTDATRRLLAPITAREIHARLLMGPHGETL 180 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 L+ ++ S I + + I+ ++V++LA + MS SAF FK+VT TSPLQY Sbjct: 181 HKLLWHESTASRIFQATRDIQTHLARAIAVKELARDVGMSSSAFFEQFKAVTGTSPLQYQ 240 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K+ RL +AR + K S A VGYES++QFSRE+ R FG +P D Sbjct: 241 KDLRLLRAREALQTSSAKVSEIAFGVGYESSAQFSREYSRKFGRSPRHDRE 291 >UniRef50_Q1MYY9 AraC-family trancriptional regulator n=1 Tax=Bermanella marisrubri RepID=Q1MYY9_9GAMM Length = 300 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 98/288 (34%), Positives = 155/288 (53%), Gaps = 7/288 (2%) Query: 27 RLLADKVNKLKNKE--NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 + L +++ + E + LLP V+L + + P+MY+ G+ + G K G Sbjct: 4 KTLIEQLLEAAGGEKMGYVDTLLPHVKLYVLDQYQSACPLMYDSGLFFVLQGSKRGKAAG 63 Query: 85 RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE--LLMDIGEDEHFQP 142 + F YLLL+ +P ECET A + P+ G+ + + ++ +M+ + Q Sbjct: 64 QEFSTSPQTYLLLSNTMPVECETLAQPDEPVVGIYVAFNRDEISRQVHIMESHKIRGEQE 123 Query: 143 SMAASGINS---ATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 S AA +N + + + +L + M P ILG + ++ Y VLTGP L Sbjct: 124 SDAAEQLNVINSMSTPDRLAVLVSQLAEAMLDPCQLEILGPSFVNQLYYQVLTGPGYHTL 183 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 VS + FS ++R ++ +++ T+ +SV+ LA+ A MSVSA+HH FK VT SPLQ+L Sbjct: 184 KQWVSADSKFSAVTRSIEYMQSNLTKRISVDDLASIAGMSVSAYHHYFKQVTGVSPLQHL 243 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 K RL +A+ +++ + AS A VGYES +QFSREFKRYFGV P + Sbjct: 244 KQLRLVRAKDLLVQQKLSASQTAFDVGYESPNQFSREFKRYFGVPPSK 291 >UniRef50_A4BKJ5 Probable transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BKJ5_9GAMM Length = 297 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 75/282 (26%), Positives = 142/282 (50%), Gaps = 4/282 (1%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 +K + + + ++ P A +Y P + ++ G K + ERV + Sbjct: 11 AYADKHRLSNEPTPIGVGGLSIVRSREPSALMNTLYNPLLCLVLQGQKEARLGERVVTFS 70 Query: 91 ANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 A E L++++ +P + A + P L L + + ++ + ++ + A+ I Sbjct: 71 AGESLIVSINIPTVSQVTAASPAKPYVALALEICLDTIRAIQAELELSDDDVADNAS--I 128 Query: 150 NSATLSEEILCAAERLLDVMERP-LDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 S E++ A +RL ++ +R ++ +I+ ++REI + +L GG L L +H Sbjct: 129 ASGISGGELVQAVKRLFELRDRSYVEQKIMAPILLREIHFRLLLESHGGMLRRLAYPDSH 188 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 S I+R + +++ + E + V+ LAA MS S+FH +FK+VT+T+PLQ+LK+ RL A+ Sbjct: 189 ESRINRAILKLQKDFAEPICVQDLAALVGMSASSFHEHFKAVTATTPLQFLKDVRLLVAQ 248 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 ++ + S VG+ES + FSRE+ R FG P ++ Sbjct: 249 QKLLATALSVSTVGFEVGFESTAHFSREYARKFGYPPSQNRR 290 >UniRef50_Q6FB96 Putative transcription regulator (AraC family) n=2 Tax=Acinetobacter sp. ADP1 RepID=Q6FB96_ACIAD Length = 299 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E + LA KV+ L E + L +Y+ G+ ++ G K I Sbjct: 12 EKTKSLARKVDGLVKNE-DFQTEISGFSLHRR-VNKQSIHCIYDLGLGVILQGEKQVLIG 69 Query: 84 ERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 +F Y + +L T+ LP T + P G+ L +DI + E+ G E+ Sbjct: 70 NEIFSYGCGQTMLTTIDLPAVSRLTQVSYSEPFLGMMLKLDIGMITEIA---GSMENINV 126 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + + + ++ A +RL+D++E P + I EI+ +L G G L L Sbjct: 127 TSNIPSFSIEQMDLGLIEALDRLVDLVEDPSLISQIAPLIQHEIIVRLLLGKHGDYLRNL 186 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 + I +V+ + N + ++ V+++A +ANM+ + F ++F+ +T +PLQY K Sbjct: 187 IKISVSEKNIFKVISWLRNNFLNDVRVDEIAEQANMTSATFRNHFREITRMTPLQYQKQL 246 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 RL +AR +++ ++ A VGYES SQF+RE+ R FG+TP +D Sbjct: 247 RLQEARKLMLMQSIEIRRVAESVGYESQSQFTREYVRLFGITPQKDLK 294 >UniRef50_C1TR85 Transcriptional regulator, AraC family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR85_9BACT Length = 244 Score = 253 bits (647), Expect = 6e-66, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 41/280 (14%) Query: 33 VNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDAN 92 +++ L + + L+ G +P + I ++ G K ++ E + YD Sbjct: 3 IDRRTRTRPRLETEIAGLVLIRGNSPTEPLSYTMDSSICLIAQGRKRIFLGEESYIYDDR 62 Query: 93 EYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSA 152 +L+ +V LP + SE Sbjct: 63 YFLITSVDLPVVAQVLEASEA--------------------------------------- 83 Query: 153 TLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI 212 + +L A RL+++++ P D +LG I REI Y +L G G L +V+ H I Sbjct: 84 --TPNMLEAFLRLVNLLKSPEDLPVLGLMIKREIFYRLLVGEQGPKLRRIVTAGNHSHSI 141 Query: 213 SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMII 272 + ++ + + + + +++LA+ + MS S FHH+F+SVT+ SPLQ+ K RL++AR +++ Sbjct: 142 ASTIEWLRRNFADQIKMDELASRSGMSQSTFHHHFRSVTAMSPLQFQKRLRLNEARRLML 201 Query: 273 HDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 + + A+ AA +VGYES SQFSRE+KR FG P +D M Sbjct: 202 TERLDAATAAFQVGYESPSQFSREYKRLFGTPPAQDVKNM 241 >UniRef50_A9AC46 AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AC46_BURM1 Length = 295 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 115/291 (39%), Positives = 162/291 (55%), Gaps = 22/291 (7%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + + R + + +L E + VR + P R PV+YEP I+++ G K+GY+ Sbjct: 12 DRVRRRMIELHTRLAPDEGDTPAAIDGVRFIRVSRPAPRLPVLYEPSIVVVCQGRKLGYL 71 Query: 83 NERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 ER F YDA +YL + + VD+ + EL + + E Sbjct: 72 GERSFVYDAQQYL---------------------AISIRVDLAVIAELAILLDETLGAAV 110 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 S G+ S L + A RLL+ + P D R+LG I+REI Y VLTG G A+ A Sbjct: 111 SEP-HGVYSTPLDAPLADAVLRLLETLASPHDTRVLGPSIMREIAYRVLTGAQGDAIRAA 169 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 + +Q HF I++ L+RI +L VE LA EA MS++ FH FK VT+TSP+QY+K Sbjct: 170 LVQQHHFGRIAKALRRIHADLQADLDVETLAREAGMSLAVFHAQFKHVTATSPMQYVKTA 229 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RLH+AR+M++ +G+ A AAA RVGY SASQFSREFKR FG +PG++ MR Sbjct: 230 RLHQARLMMVQNGLGAGAAAARVGYASASQFSREFKRLFGRSPGDEVRAMR 280 >UniRef50_B6R5M8 AraC-family trancriptional regulator n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5M8_9RHOB Length = 262 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 108/259 (41%), Positives = 142/259 (54%), Gaps = 2/259 (0%) Query: 56 ETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVP 114 T VMY P I I+F G G++ + F Y Y L P+P E E A+ E P Sbjct: 2 TTATKPRAVMYSPSIRIVFQGLVRGHLGSQSFLYSQQSYAALVSPIPLEIEIVEASPEKP 61 Query: 115 LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLD 174 L + L +DI L EL++ I E E + A LSEE L + RL+ + Sbjct: 62 LYAVNLAIDINVLAELMLLI-EQEPLEFEYGEMLGRPAHLSEEALFSVCRLMQTLNSEEQ 120 Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 +IL RE LY+VL G +L L I+RVL+ + ++ NLSV+Q+A Sbjct: 121 TKILADGYYREFLYHVLKSEYGASLRVLFQNSEKSQGIARVLQVLHEDFSTNLSVDQMAK 180 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A MS+SAFH FK T SPLQY+K+ RLHKAR M++ M AS AA RVGY S SQFS Sbjct: 181 MACMSISAFHAGFKGATGLSPLQYVKSIRLHKARSMMLSQNMSASQAAYRVGYASPSQFS 240 Query: 295 REFKRYFGVTPGEDAARMR 313 REFKR+FG +P ++AA+ R Sbjct: 241 REFKRFFGSSPTQEAAKFR 259 >UniRef50_B5J4U5 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=B5J4U5_9RHOB Length = 300 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 2/292 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + + + +N+ + L L+ +TP A +Y+P + ++ G K Sbjct: 7 MTGKTLLTRASAILNQSGIRNGGLLHENSGTFLVRQDTPTAVFSTVYKPMLCLILQGTKE 66 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 N++ A + L+++ LP A E P L +D+ L+ L ++ Sbjct: 67 IGSNDKSLTAHAGQSLIVSHILPVVSRIIEAGPEQPYVALVFPLDLSLLRSLASEVVPSF 126 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 Q S S I + + +R D E + + REI +L P Sbjct: 127 SDQSSDPFS-ICLCDTDDALEGTMQRYFDQCETQQTRQFIAPITKREIHMRLLLSPHAQI 185 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L+ ++ S + + + I++ + + V +LA A MS SAF FK+VT TSPLQY Sbjct: 186 LRKLLWHESTASRVFQATENIQSNLADKIIVGELAQSAGMSSSAFFERFKAVTGTSPLQY 245 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K+ RL +AR + K S A VGYES++QFSREF R FG TP +D A Sbjct: 246 QKDLRLLRARGELQASNAKISDIAFGVGYESSAQFSREFSRKFGRTPRQDRA 297 >UniRef50_B1KC45 Transcriptional regulator, AraC family n=17 Tax=Bacteria RepID=B1KC45_BURCC Length = 373 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 3/291 (1%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFAR-TPVMYEPGIIILFSGHKIGYINE 84 LA + + L +R P + ++ + ++ G K + + Sbjct: 74 TARLAALIAAYAPHDGMFDLPLRGMRAARASAPSPQWNHGVHHACLSLVGQGAKSMRVGD 133 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 + D + L+ T LP T A P +L +D ++ L + + Sbjct: 134 ATYGIDESRMLVATADLPVTGRVTRADPAEPFLYAQLELDPRRIAALTPVVFPH-GLPKA 192 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + +++ + EI+ A RL+ ++ +P D +L I+ EIL +L GP G + + Sbjct: 193 VDYGALDTLDATPEIVDAVARLMQLIAQPDDLDLLAPLIVDEILIRLLRGPSGARVAQIG 252 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + ISR + I + Y + ++V+ LA + MS S FHH+F++VTS SPLQ K R Sbjct: 253 DAGSTTQRISRAVAWIRDHYLDPMAVDALARQVEMSPSTFHHHFRAVTSMSPLQCQKVLR 312 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 L +AR ++ M A A VGY SASQFSRE+ R FG PG D AR+R Sbjct: 313 LQEARRLMCLSAMDARQACRSVGYVSASQFSREYARLFGDAPGRDVARLRG 363 >UniRef50_A9HXN5 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria RepID=A9HXN5_BORPD Length = 306 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 91/291 (31%), Positives = 149/291 (51%), Gaps = 8/291 (2%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E R AD + + +P V +L P + +P + ++ G+K + Sbjct: 9 EHARRYADL---RVDAHGVATTPVPGVVVLRETAPSLLQYAISKPLVALVLQGNKRVSMG 65 Query: 84 ERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 ER + + A E LL++ +P + T A+ +P L + +D + L +IG P Sbjct: 66 ERSYDFGAGESLLISTDVPTVSQITRASQAMPYYSLVVELDTALIAGLAGEIG----AVP 121 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + E+ A RLL +++RP +LG ++RE+ +++LTG GGA+ AL Sbjct: 122 LAVQEPVRVEPTEAEVADTALRLLRLLDRPRHLAVLGPALLRELHFWLLTGRHGGAIRAL 181 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 +H I R + + KY + + +E LA A MSVSAFH +F+ +TS +PLQ+ K Sbjct: 182 GVMGSHAQRIGRAVAILREKYAQPVRIETLADAAGMSVSAFHVHFRRITSLTPLQFQKQL 241 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL +AR ++++G+ S AA VGYES QF+RE+ R FG+ P ++R Sbjct: 242 RLIEARRRMLYEGVSISRAADAVGYESVPQFTREYARLFGLPPARSIRQVR 292 >UniRef50_A6LZC1 AraC-type transcriptional regulator domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZC1_CLOB8 Length = 318 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 3/287 (1%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTP-VMYEPGIIILFSGHKIGYINERV 86 LA + ++ L+ + + ++ P Y P + I+ G + I Sbjct: 25 RLAHLLYTCAPQDGVLTLPISGLSIIRYSGTEIDCPKTFYLPSLSIVAQGARSISIGHET 84 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 ++ D ++ L+ + LP +T AT PL +R+++D ++ E++ + Sbjct: 85 YKLDKSQMLMNPITLPISLQTMKATKSEPLLIIRVDLDPERIAEIVPKVYSH-GLPEIKQ 143 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + I+ A RLL+ +++P D + I+ EIL +L GP G + A+ Sbjct: 144 WCAGHVMNADISIIDAMIRLLECLQKPGDVEFIAPLIMEEILIRLLRGPAGIYVAAMGFA 203 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + + +S + + +++ + V LA +MSVS+F+++FK+VTS SP+QY K RLH Sbjct: 204 DSEVNQVSEAIAWLRKNFSQAVKVSDLAKLTHMSVSSFYNHFKAVTSMSPMQYQKALRLH 263 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 +AR +++ M A+ A VGY S SQFSR++ ++G P +D R+ Sbjct: 264 EARNLMLSQHMDATTACRMVGYVSNSQFSRDYSAFYGAPPRKDIGRL 310 >UniRef50_A7GXA4 Transcriptional regulator, AraC family n=2 Tax=Campylobacteraceae RepID=A7GXA4_CAMC5 Length = 300 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 79/299 (26%), Positives = 150/299 (50%), Gaps = 5/299 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETP-FARTPVMYEPGIIILFSGHK 78 M + + + + + + + + ++ + P + +YEP ++ G K Sbjct: 2 MSVQNLREQIKELLLQKYGVAGHANSQMEALKFYITDRPGESLRAALYEPSFCVILQGAK 61 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGED 137 + ++ YD N YLL + +P T A+ + P L L + ++ E+L +I E Sbjct: 62 AVGFGKNMYGYDENTYLLASTYMPLNVRVTKASKDEPYVSLALKFSLDEIYEVLKNI-EI 120 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPCG 196 + + G+ LS+E+L RL+ + ++P + + I +EIL+ + Sbjct: 121 QKQNLQKSEKGVFFGELSDELLEPILRLVWLNDKPKSNIDYIAGLIKKEILFALANDKKS 180 Query: 197 GALLA-LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L + + + ISR + +I++ + E ++++ LA +MS S+ + NFK++TS SP Sbjct: 181 GYFLNKFAMQGSASNKISRAIIKIKDNFNEKINIKDLARACDMSESSLYQNFKTITSLSP 240 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 + + K RL +A+ ++ + + + AA VGYESASQFSRE+ R FGV P +A ++A Sbjct: 241 IAFQKKIRLEEAKNLLSNTDLPVAQAAFEVGYESASQFSREYSRMFGVAPKVHSAMLKA 299 >UniRef50_Q15RK2 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q15RK2_PSEA6 Length = 297 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 88/289 (30%), Positives = 147/289 (50%), Gaps = 9/289 (3%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 L+ ++ + + + V+L P P +YEP + + SG K N Sbjct: 4 ELIRQLIDAKAGQSGMIETRISGVQLFKITEPIRCAPALYEPSVTAIVSGGKEAIWNGNK 63 Query: 87 FRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDI----GEDEHFQ 141 YD N+Y+ T+ +P E T A+ + PL G+ ++++ + EL +++ G + Sbjct: 64 HYYDKNKYICCTMSMPIEAGTPEASPDNPLMGVYISLNTRVMTELAIELESATGVTYKVK 123 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 S+ GI++A E A RL+ + + D ILG IRE+ Y +L G G A+ Sbjct: 124 ESVHPQGISTANWDEAFTDALYRLIMLEKSTTDIAILGSSRIRELYYAILKGDSGYAVRR 183 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + I+R ++ + + E++++E LA + MS + FH FK TS SP+Q++K+ Sbjct: 184 SFGVG---NEIARSIELLSSNLNESVTIENLAHQVGMSRAVFHRKFKQATSMSPIQFVKS 240 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 RL+ A M I +G + AAM VGY S+SQFSR+FKR +G P + + Sbjct: 241 MRLNNAA-MKIAEGRNVNVAAMEVGYVSSSQFSRDFKRMYGQAPKQWSQ 288 >UniRef50_D0LTL2 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTL2_HALO1 Length = 290 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 92/287 (32%), Positives = 140/287 (48%), Gaps = 12/287 (4%) Query: 29 LADKVNKLKNKENSLSGL-------LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 L + + E+ G + + LL + P A +YEP + ++ G K Sbjct: 3 LEQLIERASRHESLNPGANRQIARPIGGLLLLKQDAPSAFEATVYEPVMCLILRGRKQVS 62 Query: 82 INERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + ++ + + E LL++ LP S+ P L L VD+ L+ L + +E Sbjct: 63 VGQQTLSFGSGECLLVSHDLPVNSRI---SKAPYLALVLPVDLAILRRLYEQV--EEAAL 117 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 A + +L A R L + + P DA++LG I E+ Y +L P GG L + Sbjct: 118 DDERARATETHRADPALLDALCRYLALADSPSDAKVLGPLIATELHYRLLMAPFGGMLRS 177 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 L+ ++ S I+R + I L+V +LA MS S+FH +FK++TST+PLQY K Sbjct: 178 LLRHDSNASAITRAIAHIRGDLCAPLAVPELARRVGMSPSSFHKHFKAITSTTPLQYQKE 237 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 RL +AR ++ G +AAA VGYES SQFSRE+ R FG P D Sbjct: 238 LRLLEARRLLSTGGASVTAAAYDVGYESPSQFSREYARKFGAPPSRD 284 >UniRef50_Q1J2Q3 Transcriptional regulator, AraC family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2Q3_DEIGD Length = 365 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 8/301 (2%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART-PVMYEPGIIILFSGHKIGYI 82 E+ R L + V + + + +P + + + +P + I+ G+K I Sbjct: 14 ELAR-LRELVARHALYDAVFTTRVPGITVARSTRTHEAMEHSVQQPALCIVAQGNKSVQI 72 Query: 83 NERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + Y+ + L+ V LP T A+ P +R+++D + EL + + Sbjct: 73 GAEQYTYNPDRMLVYAVNLPTAFWVTEASPSAPFLTVRVDLDPQFIAELALKLYPH-GLP 131 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 + G+ I+ AA +L+ E DAR +G I+ E+L +L P G + Sbjct: 132 RLQDSRGVQMTAADPAIIHAAVHILETAENERDARWVGPIILDELLMCLLLSPVGPVVAQ 191 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 L + ++R ++ I+ + L+++ LA A++ VS F+ +FK+V + SPLQ+ KN Sbjct: 192 LGRVDSGAQRVARAIEWIQGHLDKPLNIKLLAERAHLGVSTFYAHFKAVATMSPLQFQKN 251 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP----GEDAARMRAMQG 317 RL +AR ++ + A + +VGY SASQFSR++ R FG TP + AR ++G Sbjct: 252 LRLQEARRLLPSTSLDVGAISRQVGYASASQFSRDYSRLFGRTPRTEMTQGRARPSGLEG 311 Query: 318 N 318 Sbjct: 312 G 312 >UniRef50_A9G5E9 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G5E9_SORC5 Length = 288 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 ++ + +++ + L ++ +L P + +YEP + ++ G K + F Sbjct: 12 RQLPRPEDRASQYVRPLKNIGILRHHQPTSFEAAVYEPVMGLVLQGRKETVLGADSFPMG 71 Query: 91 ANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGIN 150 E LL++ LP + P L +V++ L++L + + + + Sbjct: 72 VGECLLISHDLPVIARVT---KAPYLVLLFDVELDTLRDLYEAMADS--LPSAAPPRSLA 126 Query: 151 SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFS 210 T ++ A R L + DA +LG + REI Y + T P GG L L+ +H S Sbjct: 127 VHTCDARLVDALHRYLALAGSRTDAAVLGPLVSREIHYRLATAPFGGMLRDLIRHDSHAS 186 Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 I+R + ++ + + + +LA MS S+FH +FK++T++SPLQY K +L +AR + Sbjct: 187 AIARAIAQLRRDFRSPVEIPKLARSVGMSPSSFHKHFKAITASSPLQYRKGLQLLEARRL 246 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + + SAAA VGYESA+QFSR++ R FG +P D Sbjct: 247 LRAGTISVSAAAFDVGYESAAQFSRDYTRKFGASPKHDI 285 >UniRef50_B9JLS7 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLS7_AGRRK Length = 292 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 6/282 (2%) Query: 25 ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 + + +A V+ + +P + + + TP ++EP + G K+ + Sbjct: 11 LLKAVAPFVSARAGTVG-VPTPVPRLTIWTSARATSPTPAVFEPMFYAVLRGTKVLIMGA 69 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 F + + + LP+ + T A P G+ L++D L ++ DI + E Sbjct: 70 NRFELVTGDCAVSSFGLPYSHQLTGAKPNFPYVGVSLHLDADILTRVMFDIPKRED---- 125 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + + L + A RL++++ P D L E+ Y +L G L + Sbjct: 126 RWTCAVAAGGLDGPVGDAFARLVELVNAPDDIGALAPHYEFELYYRLLQSSMGDTLRQVS 185 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 R F + + + ++E +++ LAA ++MSV++FH +FK VT SPL + ++ R Sbjct: 186 QRNGRFQQLKSAADWLASNHSEPVNIPALAAASHMSVTSFHRHFKEVTGFSPLAFQRHIR 245 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 L +AR ++ S A VGY+S SQFSRE+K FG P Sbjct: 246 LLEARKLLASGSTNVSRVAYEVGYKSPSQFSREYKSMFGSAP 287 >UniRef50_D0DBP1 AraC-type transcriptional regulator domain protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBP1_9RHOB Length = 326 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 9/291 (3%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 CR AD ++ + S + ++ P + +P I +L G K Sbjct: 43 CRRFADANSR---PDGSAPTPARGLTVVRALHPGELMVAVQKPVIAMLLQGRKRVTTLGA 99 Query: 86 VFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 F Y E +++ +P T A+ P L L +D L+ L + P Sbjct: 100 SFEYAPGEAMVIAADIPTVSRITRASIAAPYYALVLELDPAILRALRPAVSVRSGKAPP- 158 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 + + E++ AA RL +++RP +L ++RE+ Y++L G G A+ AL Sbjct: 159 ----VRVEPIDAEVIDAALRLARLLDRPEALSVLADGLLRELHYWLLMGVHGPAIAALGV 214 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 +H I+R + + +Y + VE+LA A MS AFH +F+++T+ SPLQ+ K RL Sbjct: 215 PDSHAGRIARAVDILRREYARPIRVEELAEAAAMSEPAFHKHFRAITTLSPLQFQKQLRL 274 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +AR +++ +G K + AA VGY S +QF+RE+ R F PG+D A+ Sbjct: 275 IEARRLMLAEGAKIAQAAHTVGYASVTQFTREYGRLFDAPPGKDIRAANAV 325 >UniRef50_Q82GC0 Putative AraC-family transcriptional regulator n=1 Tax=Streptomyces avermitilis RepID=Q82GC0_STRAW Length = 308 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 85/288 (29%), Positives = 136/288 (47%), Gaps = 6/288 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA + + S +P + L+ + A ++Y P I + G K +R + Sbjct: 15 LAAAIARHNEGLWS-DSAVPRLTLVALDELIAPVDLLYAPMICFIADGAKRTLAGDRSWV 73 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVD-ILQLQELLMDIGEDEHFQPSMAAS 147 + L ++ LP C + P L++D L LL G D P A Sbjct: 74 TGRGDMFLNSLVLPVTCTFE---QAPYRSAVLHLDGRLLADLLLELDGTDPLPLPRPGAP 130 Query: 148 GINS-ATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 G A+++ +L A R + +++ P D R L +I EILY +L GP G L Sbjct: 131 GAQVTASMTPALLDAVTRWVRLLDTPDDIRPLASRIEAEILYRLLAGPLGPILRQYTLAD 190 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + + + I Y E LS+ +AA A+MS + H +FK+ T SPL++ K RL + Sbjct: 191 SGAARVRVAAAYISTHYAEPLSIATIAATAHMSPATLHRHFKAATGMSPLRFQKLLRLQE 250 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 AR ++ A+ A VGY SA+QF+RE++R +G+ PG+DA+ +R Sbjct: 251 ARRQLVAGNTTAAVVAEAVGYASATQFNREYRRTYGLPPGQDASLLRG 298 >UniRef50_A9FZJ5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZJ5_SORC5 Length = 302 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 80/290 (27%), Positives = 136/290 (46%), Gaps = 1/290 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L +++ + + +P + + R + I+ G K + +VFR Sbjct: 8 LKTLISRWCPGDGVHASPVPGISCIKVSHSQQRAKRHWRASFCIVVQGTKEILLERQVFR 67 Query: 89 YDANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 Y++ + LP + PL GL+++ D L+E+ + Sbjct: 68 EREPHYIVSPIDLPVTSRVMGVSPAQPLLGLKMDFDAALLREVAAQLDRARPEGLENPGR 127 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 I S+ +L AA RL +++ P DA +L + +E+ +++L GP G A+ +V + Sbjct: 128 AIFIGKASDRMLDAAVRLGELLATPDDAAVLAPLVRKELTFHLLKGPDGPAIRQIVRAGS 187 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 I+ + ++ E++ + LA A MS +AF FK T+ SPLQY K RL +A Sbjct: 188 LAHRIAEAVYHLQASLDEDVDIAALARAAGMSRAAFFKRFKEATAMSPLQYQKRLRLLEA 247 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 R +++ +G A +A RVGY SASQFSRE+ R FG +P DA ++ Sbjct: 248 RRLMVEEGAGAEVSAFRVGYTSASQFSREYSRMFGNSPLRDARALQQKAA 297 >UniRef50_C5CNC1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CNC1_VARPS Length = 313 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 15/298 (5%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE------PGIIILFSGHKIG 80 L D V + + L P +R P YE PG++++ G K Sbjct: 20 ARLRDMVAARTSADGRTDALYPGLRCYRFSRPVR-----YEKTQRLTPGVVVVLQGRKTA 74 Query: 81 YINE--RVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGED 137 ++ R Y A + L+L + A+++ P + L++ L + + + E Sbjct: 75 HLGGDRRSLDYGATQCLVLGAEVACLGTVVGASADAPYLAIHLDLPPDVLVKSFVALAES 134 Query: 138 EHFQPSMAASGIN-SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 A N +A ++ E++ A RLL + P+D R L + EI+ +L Sbjct: 135 GTLAAEPARVTENFTAPVALEVVEAFARLLQAADDPVDRRTLAPLAVEEIVLRLLRSEAA 194 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 A+ ++ + + I + + LSV ++A +MS S F H+F+ V +P+ Sbjct: 195 AAIRSVGAVTRAGARIQAAIAFMRRHLGRPLSVAEIAGHVHMSPSHFAHSFREVAGVTPM 254 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 + +++ RL +AR++++ G++ AA +VG+ESA+ F+R F+R F TP E R+++ Sbjct: 255 RCIRDLRLEEARVLMLGAGLRPGDAAAKVGFESAAHFNRAFRRRFEATPAEYVRRVQS 312 >UniRef50_UPI00016AE94B transcriptional regulator, AraC family protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE94B Length = 282 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 41/288 (14%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 + + + L E LP VR+L +RTPV+Y+PGI+I+ G K GY ++ Sbjct: 18 RKRMVSLLLSLAPDEGYNLTALPSVRVLRSNRALSRTPVLYDPGIVIVCQGRKRGYFGDQ 77 Query: 86 VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 ++ YD YL + A Sbjct: 78 LYLYDERHYLACA-----------------------------------------PKRMEA 96 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + S L + + + R L+ M RPL+A +LG+ ++RE+ + VLTG GG++ ++ Sbjct: 97 PRSMTSTPLDDAMQTSVLRFLEAMHRPLEAAVLGQGLLRELYFRVLTGAQGGSMREALAM 156 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + F I R L+ I Y + L V +LA EA MS+ +FH +FK++T SP+QY+K+ RLH Sbjct: 157 RGQFGRIGRSLRLIHAAYAQPLDVPRLAEEAGMSIPSFHSHFKAITQVSPMQYVKSTRLH 216 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +AR++++ + A AA VGY SASQF+REFKR F +TP +A RMR Sbjct: 217 QARLLMLRHDLTAEAAGHAVGYTSASQFTREFKRLFDLTPAAEAKRMR 264 >UniRef50_A7JPV4 AraC family transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JPV4_PASHA Length = 283 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 5/281 (1%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 R + + + L K + + + + + + +P + ++ G + N Sbjct: 5 RAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQDPSLCVVLLGERQICTNGHC 64 Query: 87 FRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + E + V LP +T + +E P + L +D + +++ + + S Sbjct: 65 QVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLDFDLIAKIITQLPPQKI---SEN 121 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + L EI RLL+++ P L I+ E+ +Y+L GG + +L+S+ Sbjct: 122 INQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILNELYFYLLQSEQGGYIRSLLSQ 181 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + + I+ K +E K+ + L++ LA E MSV+ F+ +FKSVTS +PLQY K+ RL+ Sbjct: 182 DGNIAKIANATKILERKFADTLNMSALAEEVGMSVAGFYAHFKSVTSMTPLQYQKSLRLN 241 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 AR + G+ S A +VGYES SQFSRE+KR FG +P Sbjct: 242 AAREKL-QAGVSVSETAYQVGYESPSQFSREYKRQFGESPK 281 >UniRef50_C0A3K5 AraC family transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3K5_9BACT Length = 292 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 88/284 (30%), Positives = 146/284 (51%), Gaps = 6/284 (2%) Query: 30 ADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRY 89 D + + + E S++ +P + LL + + V Y P +L SG K ++ + F Y Sbjct: 5 RDILRRHCSGE-SVTSPIPKLTLLRSDVVNEPSAVSYAPLFCMLASGRKRVWLGRQEFVY 63 Query: 90 DANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 +YL+ + LP + E P G +D + E+L+ + + + + + + + Sbjct: 64 GPRDYLITSAELPLVAQVI---EAPYLGFAFALDPEVIAEILLKLPKADPGR--VPSKAV 118 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF 209 A +E+ A RLL +++RPL I+ I REIL+++L GP + L + + Sbjct: 119 AVARAEDELFDAVGRLLRLLDRPLHIPIMAPMIEREILFHLLQGPHADTIRQLGAPASPL 178 Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 S + R + I Y E + V + A A MS FH +F++VT+ SPLQ+ K RL +AR Sbjct: 179 SQVRRGIDWIREHYNETMRVGRAAKAAGMSAPTFHRHFRAVTNLSPLQFQKRLRLEEARR 238 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 ++ + A++ A VGYES SQFSRE++R FG P DA+ R Sbjct: 239 RLLAERADAASIAFDVGYESPSQFSREYRRMFGAPPRRDASEAR 282 >UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEQ8_TRIAD Length = 240 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 129/237 (54%), Gaps = 5/237 (2%) Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMD 133 G K+ ++ V+ Y A + + +PLP + E A+ + P L +++++L E+++ Sbjct: 1 QGEKVCHVGSEVYTYSAGNFFINFLPLPVQTEVVEASEQEPFLSAALGINLVRLAEIILQ 60 Query: 134 IGEDEHFQ---PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 I E+ + S S + +++ A RLL V +A ILG II EI + + Sbjct: 61 IERIENQEIQNSSFDTSCVVVGDADADLVDAFNRLLKVSRSEAEAAILGGAIIDEIYFRI 120 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 LT G AL L+++ H +S+ + I +++ VE+LA +NMS + F + FK + Sbjct: 121 LTSEHGFALRELLNQYGHIQPVSKAVNYIHANLDKSIQVEELANLSNMSKTTFFNAFKRL 180 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 P QY+K +L +A+ ++ GM+A+ A+ VGY S SQFSRE+KR+FG +P + Sbjct: 181 MHLPPNQYIKGIKLQRAQALLKQ-GMQANEASYHVGYSSFSQFSREYKRFFGFSPSQ 236 >UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKP8_9FIRM Length = 299 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 8/299 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E R + + KL KE +P V + E R P + P + I+ G + Sbjct: 1 METAIRTMQKDIRKLSLKEGENQTGIPGVTVYCFEEEKIRMPSVDNPYLYIVLDGMLRLH 60 Query: 82 INERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMD-IGEDEH 139 + Y A +Y + + P SE + + + +++ +G D Sbjct: 61 TPSGIMDYMAGQYSVSRIDTPLMGTVLKFSEQRDFLAMSVEF---TVNDVITTVLGLDND 117 Query: 140 FQPSMAASGINSATL---SEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + ++ + E ++ + ++L + R + + + K I+RE++Y VL G CG Sbjct: 118 LTEKIMKEQLDRNRMALSDEAVIESVDKLFSGIYRAVPSEFMRKNILREMIYAVLCGSCG 177 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 + V I I+ + ++ +VE LA + NMSVS FH F+S PL Sbjct: 178 RQFIQSVVNTRPAEEIYEANSWIKENFRDSFTVESLAEQRNMSVSLFHQKFRSAVGMGPL 237 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 Q K RL +AR +++ + + A++ VGYES SQF R++++ FG P ED M+ Sbjct: 238 QCQKRLRLTEARRLMLDERKNVTEASVEVGYESVSQFIRDYRKMFGSAPKEDILNMKKH 296 >UniRef50_C7DDR7 Transcriptional regulator, AraC family n=2 Tax=Rhodobacterales RepID=C7DDR7_9RHOB Length = 217 Score = 217 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 116/211 (54%), Gaps = 3/211 (1%) Query: 97 LTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLS 155 ++ LP T A+ P L L +D+ ++ L + + + P + ++ Sbjct: 2 VSHDLPVVSRITKASVGEPYIALILALDLGVVRSLCNQVADAD--LPEASPQTLSVWQAD 59 Query: 156 EEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRV 215 + L R ++ +D ++LG I+REI Y +L P GG L +++ +H + I++ Sbjct: 60 PKWLGPLTRYAELTGNTMDTQVLGPSILREIHYRLLLSPIGGMLRRMMTADSHANRIAKA 119 Query: 216 LKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDG 275 ++ + N++ ++S+ +LA A MS S+FH +FK+ TST+PLQY K++ L AR +++ DG Sbjct: 120 IQMLRNEFRTSISMAELADWAGMSTSSFHTHFKAFTSTTPLQYQKDFCLIAARTLLVQDG 179 Query: 276 MKASAAAMRVGYESASQFSREFKRYFGVTPG 306 + A VGYES + FSR++ + FG+ P Sbjct: 180 RSVTDTAYAVGYESPTHFSRDYSKKFGLPPS 210 >UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B5740E Length = 299 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 7/267 (2%) Query: 49 DVRLLY-GETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET 107 + L P Y P + ++ +G K + + + + + + V LP Sbjct: 30 GLGLSRLRTVPGGLAYQRYTPSLSVVLAGRKRSVVGDDDQVWGLDRFFITPVDLPVLSGV 89 Query: 108 YATSEV-PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 AT E R +D + E+ + + + RLL Sbjct: 90 VATDERYGFLSARWRLDPALVTEVATAMPRTRREPSGRLDR---LGAWTPALADVFARLL 146 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 +++ P +LG Q RE + +L +LA + H ++ R ++ + + E Sbjct: 147 GLLDEPEHIPLLGPQFARETVLRLLQTTQAPRVLAAI--DAHDPVVPRAVRLLTERIAEP 204 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +++ LAAE + S + FK TS +P+QYLK RL +AR ++ G A+ AA VG Sbjct: 205 WTLDALAAEVSASRATLSRRFKQATSMTPMQYLKRLRLGEARHRMVVRGDSAARAATAVG 264 Query: 287 YESASQFSREFKRYFGVTPGEDAARMR 313 Y SA F+R+++ +G +P DAAR R Sbjct: 265 YRSAPHFTRDYRLVYGTSPAADAARAR 291 >UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein n=2 Tax=Flavobacteriaceae RepID=Q1VVA7_9FLAO Length = 306 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 18/258 (6%) Query: 68 PGIIILFSGHKIGYI-NERVFRYDANEYLLLT------VPLPFECETYATSEVPLAGLRL 120 P I + SG KI ++ N+ F + E ++L + P AT + P + L Sbjct: 52 PIIASMISGRKIIHLKNKATFDFLPGESVVLPAKKKMIIDFP-----DATLDSPTRCMAL 106 Query: 121 NVDILQLQELLMDIGEDEHFQPSMA-ASGINSATL----SEEILCAAERLLDVMERPLDA 175 +D ++QE + + S S +N + L + ++ ERLL + Sbjct: 107 GIDSQKIQETIDVYQNATEIEESFTLGSNLNLSPLHLNNNTQVQHLLERLLQTFSSGHKS 166 Query: 176 R-ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 + L +I+E++ +L GALL S ++ VLK I Y ++++VE LA Sbjct: 167 KDALLDVMIKELILRLLQTNARGALLDENSYLFDNHRMAFVLKYIREYYKDDITVEDLAD 226 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 +A MS S F+ +FK+ +P++YL + RL +A+ +I K S A G+ S+S F Sbjct: 227 KACMSKSHFYKSFKNTLGETPMEYLNSERLKQAKKLIRTTSSKLSEIAFSTGFNSSSYFV 286 Query: 295 REFKRYFGVTPGEDAARM 312 +FK+ G+TP + + Sbjct: 287 TQFKKQEGMTPSQFRKSI 304 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 76/318 (23%), Positives = 122/318 (38%), Gaps = 31/318 (9%) Query: 6 AQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVM 65 A+ NCR +P L CR D + K+ L P + Sbjct: 10 AKVNCRQMPGTL---VFASCCRRWQDLLVKIYT--------------LRQTEDSVIIPSV 52 Query: 66 YEPGIIILFSGHKIGYINERVFR-------YDANEYLLLTVPLPFECETYATSEVPLAGL 118 EP I+ + SG+ I ER A ++ L T P P+E A E L + Sbjct: 53 AEPFIVWVLSGN--AVIEERELDGEWTANHVAAGDFYLTTSPTPYELRWKAVGEAQLEVM 110 Query: 119 RLNVDILQLQELLMD-IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP--LDA 175 L + + ++ + +G+ SG + LS + + D +P L A Sbjct: 111 HLYLGLPLFRQAAREVLGKAGRRASLREVSGRHDPVLSVFLGQLHREITDSGGKPSLLFA 170 Query: 176 RILGKQI-IREILYYVLTGPCG-GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLA 233 R + + + + + +Y T G G L + S + R+ +E E +++LA Sbjct: 171 RGIAQSVAVHLVRHYADTNTAGTGDAHGLRGGRLPASSLRRITDFMEAHLDEEFRLDELA 230 Query: 234 AEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQF 293 EA MS F F+ T SP +Y R+ AR ++ + VGY S S F Sbjct: 231 REAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLLRETSRSVIEVGLEVGYSSPSHF 290 Query: 294 SREFKRYFGVTPGEDAAR 311 ++ F+R GV P E + Sbjct: 291 AQVFQREAGVPPSEYRRQ 308 >UniRef50_Q2NVE4 Putative transcriptional regulator n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NVE4_SODGM Length = 235 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 113/207 (54%), Gaps = 2/207 (0%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 K+RD I R +A ++ L E LL ++ + E P RTPV+Y+P I+I+ Sbjct: 8 GKMRDAI-ASIPRQMALLLDTLARAEGYTRSLLEGIQFMRAEHPLERTPVLYDPCIVIVC 66 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDI 134 G K GY+ E+ + YD + YL+L+VPL F ET A+ + PL + + +++ L EL+M + Sbjct: 67 QGRKRGYLAEKGYCYDQHHYLVLSVPLQFLTETEASPQYPLLAVAIALNMAVLSELVMWL 126 Query: 135 GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 + + A GI L I RLL + +ARILG Q++RE+ Y VL G Sbjct: 127 -DRPGTRACDAPEGIIYTPLDAAIADTTLRLLQALASKEEARILGPQVVRELYYRVLVGE 185 Query: 195 CGGALLALVSRQTHFSLISRVLKRIEN 221 G AL A ++ Q HF+ ISR L+RI Sbjct: 186 RGNALRAALANQGHFAHISRSLERIHR 212 >UniRef50_A6ES38 AraC-type DNA-binding domain-containing protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ES38_9BACT Length = 306 Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 19/300 (6%) Query: 30 ADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE-PGIIILFSGHKIGYINE-RVF 87 A K+ L + + ++ + + + ++ P I + +G KI ++NE F Sbjct: 11 ARKLYTLVENRTTYNAAYSELNIFETHKVANQVSLTFDFPVIASMLTGKKIMHLNELSPF 70 Query: 88 RYDANEYLLLTVPLPFECET-----YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 + E +V +P E AT E P L L +D ++ E+ E + Sbjct: 71 EFLPGE----SVVMPAHQEMVIDFPIATKEKPTQCLALGIDAEKIHEVAYKFNEQILLKD 126 Query: 143 SMAASGINSATLSE-----EILCAAERLLDVMERPLDAR-ILGKQIIREILYYVLTGPCG 196 + T S E+ ERL+ + ++ +L +I+E++ +L Sbjct: 127 EKDVWTLEEGTASHLTNQIEVNYLIERLVTTFTKNTASKDVLLDLMIQELIVRLLQTKAK 186 Query: 197 GALLALVSRQTHFSLISRVLKRIENKY-TENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 ++L + + I V+K I +N++V+QLA +A MS S+FH FK+ SP Sbjct: 187 HSILNDHLQIFSDTRIGHVVKFIRENLTDKNINVDQLAEKAYMSTSSFHKKFKNTLGISP 246 Query: 256 LQYLKNYRLHKARMMI-IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 + ++ + ++ A+ ++ + M S A + G+ + S F+R+FK+ +TP + + + Sbjct: 247 IDFINSEKIKFAKKLMKRNKKMLISEIAYKSGFNNVSYFNRQFKKLEFMTPQQFKISLGS 306 >UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XH00_CALS8 Length = 275 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 14/248 (5%) Query: 70 IIILFSGHKIGYINE-RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 + G K INE F+YD+N +++ LP E L + +D + Sbjct: 39 FCSILQGDKYVEINESEKFKYDSNSFVI----LPPYSRVKLEIEEKTKALVIEIDSYLIN 94 Query: 129 ELLMDIG-EDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREI 186 +L + E E ++ + S ++ ++++D R ++ L +E Sbjct: 95 HVLSKLKIEFEPYELGNVNNIFFVGKYSPDLTQTYKKIVDTFFSRKVNREFLLDLYTQEF 154 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 +Y + ++ S I +L I N Y L + +A E NM F Sbjct: 155 VYDIFKYRGAEKII-----NDKNSEIYHILDYINNNYLRRLKISDIAKEFNMKEYEFTRY 209 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK T SP +Y+K+ +L+KA+ ++ + + +GYE+ S F +EFK FGVTP Sbjct: 210 FKKFTGKSPKEYIKDLKLNKAKELLKFEN--VTDVCYDIGYENISHFIKEFKNKFGVTPN 267 Query: 307 EDAARMRA 314 + + Sbjct: 268 LYKKALNS 275 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 173 bits (438), Expect = 9e-42, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 100/280 (35%), Gaps = 34/280 (12%) Query: 50 VRLLYGETPFAR--TPVMYEPGIIILFSGHKIGYINERVFRYD-------ANEYLLLTVP 100 V++ P + EP I+ + SG I ER D ++ L P Sbjct: 66 VQVYSRLKKQEPFLVPAVAEPLIVWVISGEAIV--EEREIDRDWVTNTVTVGDFFLTRSP 123 Query: 101 LPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 P+E AT P + L + + + + D+ SG LS Sbjct: 124 TPYEMRWRATGAAPFQVMHLYLSVPLFERVAKDLLGRAARPALRDVSGGKDEQLSH---- 179 Query: 161 AAERLLDVMERPLDARILGKQI----------IREILYYVLTGPCGGALLALVSRQTHFS 210 LL ++ + L A G Q+ + I Y G GG AL Sbjct: 180 ----LLALIHQELTAEGKGSQLFIQGLAQSLAVHLIRNYASNGSEGGRQTAL-----PGF 230 Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 + R + +E E ++ +L+ MS F FK T SP +Y R+ +A+++ Sbjct: 231 KLRRAVAYLEEHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLL 290 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 + M VGY S S F++ F+R G+ P Sbjct: 291 LQETDTSIIKIGMSVGYSSPSHFAQVFRRETGLPPSHYRR 330 >UniRef50_D2QFH9 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QFH9_9SPHI Length = 311 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 128/311 (41%), Gaps = 10/311 (3%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE-PGIIIL 73 KKL + E +++ L + +LS ++ L + + P + + Sbjct: 2 KKLGKLATNEAVSAWGARLDTLVENKLTLSHDAAELHLYETFQQAQLIQLRFNAPVMTSM 61 Query: 74 FSGHKIGYINE-RVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELL 131 SG K+ ++ E F Y E LLL + + AT+ P L L + ++E + Sbjct: 62 LSGRKVMHLREMEPFNYQPGESLLLPSDRLMQIDFPDATTHDPTRCLALTISDEFIRETI 121 Query: 132 MDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLDVM--ERPLDARILGKQIIRE 185 ++ E+ + +N+ EI ++L+ + P K +RE Sbjct: 122 AELNEEVPRVELVDEWQLNTDNYLLQNDPEISSLTDKLIRLFRENNPFKT-FFIKNTLRE 180 Query: 186 ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 ++ + LL S+ T + ++ ++ I + T NLS+++L+ +A +S S F Sbjct: 181 LIVRLSQTQVRTGLLHQTSQHTTTNRLAYIVSYIRDNITRNLSIDELSDKACLSQSHFFR 240 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FKS SP Q++ R+ +A+ ++ + A G+ S + FS F+ + P Sbjct: 241 LFKSELGISPAQFILTERIRRAKTILSDPAKSVTDACYESGFNSVTHFSNAFRSIEHICP 300 Query: 306 GEDAARMRAMQ 316 + ++ + Sbjct: 301 RDFKRQLAGLN 311 >UniRef50_Q3ADL3 Transcriptional regulator, AraC family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADL3_CARHZ Length = 287 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 105/251 (41%), Gaps = 21/251 (8%) Query: 70 IIILFSGHKIGYINE-RVFRYDANEYLLLT----VPLPFECETYATSEVPLAGLRLNVDI 124 I + G K INE Y + +L V L E +T A L + VD Sbjct: 40 ICTILEGKKQVSINELERVEYTKENFAILAPNSKVDLNIENKTKA--------LVIEVDN 91 Query: 125 LQLQELLMDIGEDEHFQP-SMAASGINSATLSEEILCAAERLLDVME-RPLDARILGKQI 182 + +L+ I + ++ + +EE+L +R++ + + L Sbjct: 92 NVVNQLIERIQFELGYEEIKKITNYFFLCNFTEEMLETYKRIVRTLNSQEKGKEFLLDLY 151 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 I+E+LY +L ++ V + I+ +L I Y +N+ V +A M Sbjct: 152 IQEMLYEILKFRGAKEIINSVKN----ARINNILSYINESYHKNIKVADIAKIFGMEEYE 207 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 F FK+ T +P +Y+K RL KA+ ++ + + VGYE+ S F +EFK+ F Sbjct: 208 FCRYFKTYTCKTPKEYIKELRLKKAKELLQYQ--SVTETCYEVGYENISYFIKEFKKAFQ 265 Query: 303 VTPGEDAARMR 313 +TP + + Sbjct: 266 MTPKQYQKEAK 276 >UniRef50_A5FFR2 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes RepID=A5FFR2_FLAJ1 Length = 307 Score = 170 bits (431), Expect = 6e-41, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 127/293 (43%), Gaps = 19/293 (6%) Query: 34 NKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG-----------IIILFSGHKIGYI 82 + E SL L+ + + YE + + G KI ++ Sbjct: 10 PPHLSNEKSLKTLVENRSVYTLNQCELNLFETYESSNLVPLKFNDFVVTSMLRGKKIMHL 69 Query: 83 -NERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 +E F Y E +++ + + + A+ E P L L +D ++ E L + E Sbjct: 70 FDEPAFDYLPGETVVVPSNIEMKIDFPEASRENPTQCLALAIDNTKINETLNFLNERYPK 129 Query: 141 QPSMAASGINSATL----SEEILCAAERLL-DVMERPLDARILGKQIIREILYYVLTGPC 195 + + A +N + ++ +L+ + M + L ++E+L ++ Sbjct: 130 EGTDAFWQLNYQNYFFYNNVDLAATINKLIKECMSTSITKDALADLTLQELLIRIIQTQT 189 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 ++ + Q++ + I V + I EN++++ L+ +A MS ++F+ FK SP Sbjct: 190 AKSIDEGIVIQSN-NPIYEVTEFIRLNLKENINLKILSEKACMSTTSFYRFFKRELGMSP 248 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 ++Y+ N ++ A+ ++ + G++ + G+E A+ F R FK++ G+TP + Sbjct: 249 IEYILNEKIKHAKKLLRNPGIQINEVCYLSGFEDANYFIRLFKKHEGITPKQY 301 >UniRef50_Q099H5 Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q099H5_STIAU Length = 225 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 92/242 (38%), Gaps = 27/242 (11%) Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELL 131 + G K ++V Y +L ++ +P E A+ P + + ++ +L Sbjct: 1 MVQGRKELSFGQKVLAYTVGNHLAPSIHMPAEGRGVGASKARPYLCVWFD-PPHEVGSVL 59 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 + G S A+ ++L + ++E P DA L REI+Y + Sbjct: 60 AEAGLRLGSASSGKAAAF-IGQSDSKLLEVVLHFMRLLEDPSDAAFLAPSSKREIIYRLF 118 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 TGP G + I R + + FK Sbjct: 119 TGPGGADFCQGMQLGRQGVGIGRAIDWLTAH------------------------FKQPL 154 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 PLQY K+ RL +AR + + ++ AA V YES SQF RE++R FG+ P D Sbjct: 155 KMGPLQYQKHLRLEEARRLRLGGLADSTGAAFAVDYESPSQFIREYRRRFGLPPLRDVKS 214 Query: 312 MR 313 MR Sbjct: 215 MR 216 >UniRef50_C6VUN3 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUN3_DYAFD Length = 308 Score = 166 bits (422), Expect = 7e-40, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 119/269 (44%), Gaps = 11/269 (4%) Query: 50 VRLLYGETPFARTPVMYEPGIII--LFSGHKIGYINERV-FRYDANEYLLLTVPLPFECE 106 + L P A P+ + P ++ + G K+ ++ ++ F Y E +L+ + + + Sbjct: 35 LNLFETLQPSALVPLTF-PDFVVTSMLRGKKVMHLFDQPGFDYLPGETVLVPANVTMKID 93 Query: 107 T-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCA 161 A + P + L +D ++Q+++ + E + + + E+ Sbjct: 94 FPEAQRDNPTQCIALAIDHTKIQQIVDRLSETYPREGRQQFWSLQHNQYHFLNNIELAQT 153 Query: 162 AERLLDVME-RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 +L+ + L IL ++E++ +++ A + Q + ++ V+ I+ Sbjct: 154 LNKLIKICSGSALGKDILADLTLQELIVHIIQTQHLAAT-DDAAYQHEDNPLAFVVNYIK 212 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 E + VE L+ +A MS ++F+ FK S SPL ++ ++ KA+ ++ H S Sbjct: 213 ANINEKIQVEDLSEKACMSRASFYRAFKREFSISPLDFILREKIKKAKQLLSHTKDSISD 272 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDA 309 ++G+ + F R+F++ G++P + Sbjct: 273 ICYQLGFSDLNYFGRQFRKSEGISPSQYR 301 >UniRef50_A3HZK9 AraC-type DNA-binding domain-containing protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HZK9_9SPHI Length = 307 Score = 163 bits (412), Expect = 9e-39, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 104/252 (41%), Gaps = 18/252 (7%) Query: 73 LFSGHKIGYINERV-FRYDANEYLLLT------VPLPFECETYATSEVPLAGLRLNVDIL 125 + G K+ ++ ++ F Y E +++ + P A + P + L++ Sbjct: 59 MLKGKKVMHLFDKPGFEYLPGESVIVPPNEVMKIDFP-----EAQWDNPTQCIALSISKE 113 Query: 126 QLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLD--VMERPLDARILG 179 ++ + E + G++ + ++++ R + V + + ++ Sbjct: 114 MIEATFNLLNEKFPDKVITKDWGLDLSYFHLINTQDLSEIINRFVRIGVKDGSKEKDLIA 173 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 ++E+L + L + ++ V++ I+ E +S++ LA EA MS Sbjct: 174 TLALKELLIRLSQTQARDMLEKTYKELASGNRMAHVVEYIKKNIRETISLDDLAGEACMS 233 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 + F +FK +P++++ + RL+ A+ ++ + G+ + + F R FK+ Sbjct: 234 KAHFLRSFKQELGLTPMEFVLHERLNLAKQYLLLGNHQIQEVCYMAGFRNITYFIRAFKQ 293 Query: 300 YFGVTPGEDAAR 311 FG+TP + Sbjct: 294 EFGLTPKVFQTK 305 >UniRef50_Q1QTE9 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTE9_CHRSD Length = 318 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 112/311 (36%), Gaps = 27/311 (8%) Query: 14 PKKL-RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLL-----YGETPFARTPVMYE 67 P L R RL+ +++ +G ++ + + + V+Y Sbjct: 17 PGTLERLTDTPRTRRLIENRI--------CYAGPHAELSVYDTWWPARDVALSAERVLY- 67 Query: 68 PGIIILFSGHKIGY-INERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDIL 125 + G K+ + E + E +L + A + P + +++D Sbjct: 68 ---CGMLKGRKVMHGATEEPETFLPGESFVLAPYQEVRIDFPEARPDAPTTCMTIDLDPA 124 Query: 126 QLQELLMDIGEDEHF-----QPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILG 179 ++ L + + + A ++ ERL+ + E D L Sbjct: 125 RVHALSERLNQSHPRDKELGEWHYAPRALHV-PHGPSTQSLIERLMGLFRENHPDRDALI 183 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 I E++ +L LLA + ++ L +E + L QLA EA MS Sbjct: 184 GLGIDELIVRLLRTQSRELLLADARQTPPRHGLAAALAWLERHPEQPLDGAQLAREACMS 243 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 + + F+ +P +Y + RL +AR + + +GY S S F+R FK Sbjct: 244 KARLYRLFQREVGCTPGEYQQRLRLARARQWLRDADAPITEICYSLGYRSLSHFTRRFKA 303 Query: 300 YFGVTPGEDAA 310 +G+TPG+ Sbjct: 304 AYGLTPGDYRR 314 >UniRef50_Q0TTY3 Transcriptional regulator, AraC family n=8 Tax=Clostridium perfringens RepID=Q0TTY3_CLOP1 Length = 285 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 52/249 (20%), Positives = 106/249 (42%), Gaps = 15/249 (6%) Query: 70 IIILFSGHKIGYINE-RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 + + G K IN YD+++Y+L LP E P L L ++ + Sbjct: 42 LCTIVDGEKNVRINNGENIIYDSSKYML----LPPNSSVEMKIEKPTKALVLELNEDLIN 97 Query: 129 ELLMDI--GEDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIRE 185 + + D S+ + +E I +R+++ + + L +E Sbjct: 98 TVSEKLSYELDVDLNKSILEKPFFNEN-NELIELTTKRIVETATKDTNNKEFLLDLYAQE 156 Query: 186 ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 I Y +L +++ + I+R ++ ++ N++V ++A + NMS+ +F Sbjct: 157 ITYSLLNTKGAKDIIS----SDFNNPINRSIQIMKGNLKNNITVSEIAYDLNMSLPSFSS 212 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FK +P YL + +L++A ++ + A +GYE+ S F + FK+ FG+TP Sbjct: 213 KFKKAMGMTPNDYLTSLKLNEAARLLKFS--SVTEVAYDLGYENISHFIKLFKKKFGLTP 270 Query: 306 GEDAARMRA 314 + + + Sbjct: 271 KQYSLKYSG 279 >UniRef50_B9JQ27 Helix-turn-helix, AraC type n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ27_AGRRK Length = 299 Score = 161 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 12/256 (4%) Query: 67 EPGIIILFSGHKIGYI-NERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDI 124 P + + GHKI + + F + E +L+ +P E A+ E P + + +D Sbjct: 39 NPIVCQMMRGHKIMRVNGSKPFDFLPGEAMLVAPGMPLEILFPEASPEDPTECICIEIDR 98 Query: 125 LQLQELLMDIGEDEHF-----QPSMAASGINSATLSEEILCAAERLLDVMERPLD--ARI 177 Q+ E++ + + + + S+ + IL RL+ + + Sbjct: 99 SQVDEIVERVNQGQKRLGLDGRFSLDWTRFAVFRKDLAILGQMNRLMTLYRDEKSPFRDV 158 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 L E++ +L LL + + + + + + E ++E LA A Sbjct: 159 LVDLGHEELVLRILQA-QSRELLVEQRTFSPTTGLDVAAEMLRDNPRERYAIEDLAQIAC 217 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 MS + F FK+ +P ++ + R+H+AR ++ + A +G+ S FSR F Sbjct: 218 MSEATFFRRFKARFGVTPAKFANDCRIHRARALLATT--PVTEVAFDLGFASVEHFSRLF 275 Query: 298 KRYFGVTPGEDAARMR 313 +R G TPG R+R Sbjct: 276 RRVTGETPGGIRKRLR 291 >UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacteroidetes RepID=A1ZYI4_9SPHI Length = 303 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 52/257 (20%), Positives = 107/257 (41%), Gaps = 17/257 (6%) Query: 67 EPGIIILFSGHKIGYINER-VFRYDANEYLLLT------VPLPFECETYATSEVPLAGLR 119 +P + + +G KI Y F + E L+L + P A+ + P L Sbjct: 48 QPILASMLTGKKIMYFEHTKSFDFLPGESLILPGNETMCIDFP-----EASLQKPTRCLA 102 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSA---TLSEEILCAAERLLDVMERPLDAR 176 + ++ +++++ + E+ I+ T I +RLL + ++ Sbjct: 103 MAINEDKIKKIAALLNENMPKIDGNEWRFIDFNFHFTNDVAIHGIIQRLLFLFTENHPSK 162 Query: 177 -ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 I +++E++ +L + V Q ++ V+K I+ + LS++ L+ + Sbjct: 163 DIFADFMLKELIIRILQKENREHF-SSVQSQPDDHRLTYVIKYIKENLDQPLSIQHLSDQ 221 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 +MS S F+ FK+ SP ++ + R+ A ++ K + G+ S S F+R Sbjct: 222 VHMSESNFYRVFKNELGVSPTDFINDERIKLATRLLHDPHKKIKEVYLECGFNSMSYFTR 281 Query: 296 EFKRYFGVTPGEDAARM 312 FKR +P E ++ Sbjct: 282 LFKRKKKASPSEFQRKL 298 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 106/261 (40%), Gaps = 18/261 (6%) Query: 51 RLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 R+ GE RT + GII+ +G I +N + + + +P E + Sbjct: 24 RMEPGEVDLGRTTAPEKCGIIVPLAGSAIFSLNGTPYVMEPGVIVHAGPQMPIEVNVTSQ 83 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 A + N+ + E+ P + + + +I+ ++L++ Sbjct: 84 KVWEYAVVHYNLPM-----------EETALYPLVEQHFLIKTGHNTQIITQVQQLVESYS 132 Query: 171 RPLDARIL-GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 P + + K + +L ++L L L+ + L+ I Y E +SV Sbjct: 133 FPGNMAVFKSKTLFMNLLEHILIAAKVKVL------DNANELMEQALQYIHEHYAEQISV 186 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 +++E ++ F + F+ T +P +Y+ YR+ +A+ ++ + G+ + A VGY Sbjct: 187 SNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYGGIPVAEIAECVGYVD 246 Query: 290 ASQFSREFKRYFGVTPGEDAA 310 FSR FK+ G++P Sbjct: 247 CFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_C6IPT3 Transcriptional regulator n=3 Tax=Bacteroides RepID=C6IPT3_9BACE Length = 286 Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 25/264 (9%) Query: 52 LLYGETPFARTPVMY-EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 L+ G+T + MY P K YI F ++ YL + + Sbjct: 47 LISGKTQILKANHMYFIPAF------TKHSYICNSYF---SHYYLHIYEEHQSDSNLLDN 97 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 + P+ + +D+ Q L I Q S S N+ TL + LL + Sbjct: 98 WDFPIEIPAVEIDLALFQRLCT-INPHMTLQKSDPTSYDNNYTL-------MQNLLKNKQ 149 Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 R L +I + I+ ++L L A V + + I + I E + + Sbjct: 150 RTLSDKIESRGIVYQLLARFLK-------RAQVKMELKDNRIEEAIHYIRKHINETIDLR 202 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 LA + +S F FK T +PL+Y+ ++ KA++++I D M A+ + +E Sbjct: 203 VLAENSCLSKDHFIRLFKKETGDTPLKYINRKKIEKAQLILITDDMSIKNVALNLAFEDY 262 Query: 291 SQFSREFKRYFGVTPGEDAARMRA 314 S F+R FK+ G+TP E + Sbjct: 263 SYFNRLFKKITGITPQEYRTSYHS 286 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 89/229 (38%), Gaps = 10/229 (4%) Query: 86 VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDI-GEDEHFQPSM 144 A ++ L P+E A + L + + + + ++ G + Sbjct: 154 TMNVRAGDFFLTDTDEPYEMRWQALEGERFEVMHLYLGLPLIDQAARELLGPQSTSVALL 213 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT---GPCGGALLA 201 SG T+ ++ R ++++RP + + + + + + ++L P GG Sbjct: 214 DVSGARDETV-RWLMDQLRR--ELLDRPQASPLYVRGLAQALAVHLLRHYRDPHGGVRR- 269 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 S + +V+ + + E S+ LA +S F FK T SP QY Sbjct: 270 --SNALPAYKLRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIG 327 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 R+ +AR +++ + VGY S S FS+ F+R GVTP Sbjct: 328 LRMARARQLLLETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPSIYRQ 376 >UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia RepID=A4TH83_YERPP Length = 292 Score = 156 bits (395), Expect = 9e-37, Method: Composition-based stats. Identities = 54/250 (21%), Positives = 104/250 (41%), Gaps = 14/250 (5%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 +I +G + + L +P+ + E + + P L L +D +L Sbjct: 53 LIFCLNGSGFIRLENNLHEVKKGN--LAWLPVRWPHEHFPNKQEPWEILWLRIDGAKLNN 110 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMER-PLDARILGKQIIREILY 188 ++ + +A + T E I RL D+M+ L A + +++Y Sbjct: 111 IMQIL--------DVAQQPVFEFTSPETITDIYHRLFDLMQSHTLVADAHCDVLCSQLIY 162 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 +L A + V + R++ +I + Y ++ +++ +S S F+ Sbjct: 163 TLLENRSFDATKSPVISHRG---LGRLIYQIHSHYNDDWDIDKFMQYCQVSKSQLFRLFQ 219 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 + SPL++LKNYRL +AR +++ S A VGY FSR+F R G++P + Sbjct: 220 ETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDFHRSVGLSPSDF 279 Query: 309 AARMRAMQGN 318 + R + + Sbjct: 280 RRQERQLDND 289 >UniRef50_Q3ID67 Putative transcriptional regulator (AraC/XylS family) n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3ID67_PSEHT Length = 300 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 8/252 (3%) Query: 67 EPGIIILFSGHKIGYINERVFR--YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVD 123 E + SG K+ ++ + + +E +L + A+ P L + + Sbjct: 48 ELLFCAMLSGKKVMHVESCQYHRAFLPHESFVLAPEQGVLIDFEQASLSAPTTCLAIEIS 107 Query: 124 ILQLQELLMDIGEDEHFQPSMA---ASGINSATLSEEILCAAERLLDVMERPLDAR-ILG 179 ++ ++ + ++ F + + + + R++ + P + R L Sbjct: 108 TDKITQVANALNIEQRFASDDLFAYTPQLVHSQHNSQTQQLLARMVHLFSEPDEQRGYLI 167 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 + E++ +L LL + + ++ L+ IE E L +E+L A MS Sbjct: 168 DLSLNELITRLLQQQSRDLLLKHGNNPQLKTPVNNALQYIEEHLNEALDIERLCKIACMS 227 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S F+ FK TSP + + RL KA ++ G K S A +G+ S FSR FK+ Sbjct: 228 RSKFYQQFKLAFGTSPALWQQQLRLKKAYSKLLQGG-KVSQACYELGFNCPSHFSRLFKQ 286 Query: 300 YFGVTPGEDAAR 311 +GV P A + Sbjct: 287 AYGVPPASIAKK 298 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 90/294 (30%), Gaps = 31/294 (10%) Query: 37 KNKENSLSGLLPDVRLLYGET--PFARTPVMYEPGIIILFSGHKIGY----INE-RVFRY 89 + + V+L+ E P P + EP ++ + SG E Sbjct: 25 ASNDGMPESGASLVQLIRRERDNPGVTVPAVAEPLLVWIVSGQAQVSEREGAGEWETRLA 84 Query: 90 DANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 + L P++ P + + + + L + GI Sbjct: 85 RPGTFYLTATTTPYDMRWTLAEGKPFTVMHIYLALTLLDD------------AFRLCHGI 132 Query: 150 NSAT--LSEEILCAAERLLDVME---------RPLDARILGKQIIREILYYVLT-GPCGG 197 A + + A L ++ + IL + +Y V G G Sbjct: 133 AYAQGEIDDVAADADPHLDKLLGWCWQEVAHPQKGSGAILAGALKSLAVYLVRHYGRARG 192 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 + +V + ++ + LA MS FK T SP + Sbjct: 193 ERGTARPHALPAWKLQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSE 252 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + + R+ +A ++ + A VGY S S FS+ F+R G+ P R Sbjct: 253 WFIHQRIQRACRLLRETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 8/234 (3%) Query: 81 YINERVFRYDANEYL-LLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 Y++ ++ + EYL + + + E S G + D+ L D + E+ Sbjct: 57 YVDGYEYKLNEGEYLFVNSGSIHSGLEMIKRS----IGYAIVFDLRLLYSEEPDYCKHEY 112 Query: 140 FQPSMAASGINSATLSEE-ILCAAERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGG 197 F P + + L++E I R+++V E+ + K ++ +I + V Sbjct: 113 FLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIKSLLFDIFWRVFK-YYAE 171 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 I VL I Y +NLS+++L+ + +MS FK SP++ Sbjct: 172 RRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSKFYLCRLFKESLRMSPVE 231 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 Y+ R+ KA ++I+ M S A G+++ S F + FK+Y TP + + Sbjct: 232 YINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKYMHTTPLKFRKQ 285 >UniRef50_C7PFA7 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFA7_CHIPD Length = 309 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 104/255 (40%), Gaps = 17/255 (6%) Query: 70 IIILFSGHKIGYINERV-FRYDANEYLLLT------VPLPFECETYATSEVPLAGLRLNV 122 I + G K+ +++++ F Y E +++ + P AT+E P + L + Sbjct: 56 ITSMIRGKKVMHLSDKPSFDYLPGETVIVPPQETMIIDFP-----EATAENPTQCIALAI 110 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLDVMERPLDAR-I 177 D + ++E + + + ++ + EI +L+ + ++ I Sbjct: 111 DDVYIRETVDYLNNYYNSGEGRQNWQLSFHQYHFENNHEITELINKLIRICTSQDKSKNI 170 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 ++E+L +L G + + + ++ VL I TE ++V+ L+ +A Sbjct: 171 YADLQLKELLIRLLQSQQLGQAVESSVADNNGNRLNFVLHYIREHLTEKIAVDALSRKAY 230 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 +S + F F+ +P++Y+ R+ A+ ++ + G+ + F R F Sbjct: 231 LSRNLFFKWFREQFGITPVEYVNKERIKLAKELLAKPQSSIYDVSKLCGFTDVNYFIRVF 290 Query: 298 KRYFGVTPGEDAARM 312 ++ G TP ++ Sbjct: 291 RKIEGTTPKVYQCQL 305 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 20/269 (7%) Query: 53 LYGETPFARTPVMY----EPGIIILFSGHKIGYINERVFRYDANEYLLLTVP-----LPF 103 + + + Y E +I + SG INE + LL+ P+ Sbjct: 22 YHVTESHPQYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPY 81 Query: 104 ECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAE 163 +C L V +L Q + Q + A I E Sbjct: 82 DCV--------YECLVFPVSLLSSQTYASEFLNRLDRQDLILDEYF-PAGDDTAIHSLLE 132 Query: 164 RLLDVMERPLDA-RILGKQIIREILYYVLTGP-CGGALLALVSRQTHFSLISRVLKRIEN 221 RL +M+ + ++ ++ + + +L + + +S + L+ VL IE Sbjct: 133 RLFALMQDSDEGGKLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEA 192 Query: 222 KYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAA 281 YTE +++ +LA A MS F H F +T +P+ Y+ YR+ +A ++ G + Sbjct: 193 HYTEKITLHELARTAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDI 252 Query: 282 AMRVGYESASQFSREFKRYFGVTPGEDAA 310 AM G+ S F+R FK+Y G++PG+ Sbjct: 253 AMLCGFNDVSYFTRAFKKYKGISPGQYLK 281 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 113/254 (44%), Gaps = 17/254 (6%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN---VDILQ 126 +I++ G + +N + +A + + + F + ++ S+ + + Sbjct: 46 LIVIKKGQGLVNVNLVTYTVNAGDVVFV-----FPGQLHSISQKDYSIMEYENILFKSSL 100 Query: 127 LQELLMDIGEDEHFQPSMAA-----SGINSATLSEEILCAAERLLDVM--ERPLDARILG 179 L+ D+ D+ QP ++ INS + L + +D + +RP ++ Sbjct: 101 LKSSGYDLCNDKFIQPLLSGNLNIYPVINSNFDFHDSLYSLINEIDKLCDKRPYAYQLAV 160 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 K + +I +Y+L CG + +S++ I +L + + +N+S+E++A S Sbjct: 161 KSYLFQI-FYLLISNCGLNQIKPISKKA-LEKIKTILSYVAEHFQDNISIEEIAGHCFYS 218 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S F FK S +QYL +YRL A ++ A+ G+++ S F+R FK+ Sbjct: 219 KSYFMKFFKETMGMSFVQYLNDYRLEVAAKLLTTTSDDIINIAINTGFDNLSYFNRCFKK 278 Query: 300 YFGVTPGEDAARMR 313 +G+TPG+ R Sbjct: 279 KYGITPGKYRKDAR 292 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 17/250 (6%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN---VDILQ 126 II++ G I ++ + A + + + LP + +A S+ + Sbjct: 51 IIVIKKGSGIVSVDLTTYSVSAGDIIFV---LP--GQLHAISQKDNEIMEYENILFKSSL 105 Query: 127 LQELLMDIGEDEHFQPSMAAS------GINSATLSEEILCAAERLLDVME-RPLDARILG 179 L+ D+ D+ QP + S N ++ A + + + RP ++ Sbjct: 106 LKSSGYDLCNDKFIQPLFSGSLNICPVINNQTPYYPPVITAINEIDHLCDLRPYAYQLSI 165 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 K + +ILY +++ + + Q I +L I N + EN+++E +A S Sbjct: 166 KAHLFQILYTLVSNCGQNKIKPI--NQKSLKKIKTILSYIANNFQENIAIEDIANYCFYS 223 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S F FK S +QYL +YRL A ++ A G+ + S F+R FK+ Sbjct: 224 KSYFMKFFKETMGVSFIQYLNDYRLEIAAELLTTTTDNILDIAFATGFNNISYFNRCFKK 283 Query: 300 YFGVTPGEDA 309 +GV+P + Sbjct: 284 KYGVSPRKYR 293 >UniRef50_B8FQG3 Transcriptional regulator, AraC family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQG3_DESHD Length = 273 Score = 149 bits (378), Expect = 8e-35, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 97/244 (39%), Gaps = 20/244 (8%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 G++I FSG + + + + + + E E A + ++ Sbjct: 44 GLVIPFSGSACFTFDGKPYVIEPGMVVHAGPGMRLSKEVIGDREWEYAVIHYHI------ 97 Query: 129 ELLMDIGEDEHFQPSMAASGINSATL-SEEILCAAERLLDVMERP-LDARILGKQIIREI 186 + E + + + A S ++ ++LD+ P A+ K + + Sbjct: 98 ------PQHERDEYPLFHKDFSLAHGRSAKVPHLVRQILDIQSIPGAAAKFQTKVLFLSL 151 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 L + T CG Q + LI + I Y + L+V+++A E ++ F + Sbjct: 152 LQEIFTAACGQP------GQENSKLIEEAMGYIRLNYADELTVQKVADEFSVERRQFSYL 205 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK T SP+ YL R+ KA+ ++ G A VGY + FS+ FK+Y GV+P Sbjct: 206 FKRHTGMSPIHYLIECRISKAKELLGSPGCSVKQVAEWVGYTDSLYFSKAFKKYTGVSPS 265 Query: 307 EDAA 310 E Sbjct: 266 EYRE 269 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 40/143 (27%), Positives = 65/143 (45%) Query: 170 ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 E+P +L K + I YY+ A I L I + Y+ ++ + Sbjct: 142 EKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDI 201 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 + LA AN+S F FK +T +P+ Y+ +R+ KA +I + + S A VG+ + Sbjct: 202 DLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNN 261 Query: 290 ASQFSREFKRYFGVTPGEDAARM 312 S F + FK Y GVTP + + Sbjct: 262 VSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_C0YPK7 AraC-type DNA-binding domain-containing protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YPK7_9FLAO Length = 307 Score = 149 bits (378), Expect = 9e-35, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 101/256 (39%), Gaps = 20/256 (7%) Query: 69 GIIILFSGHKIGYINERV--FRYDANEYLLLTVPLPFECETYATSEV---PLAGLRLNVD 123 + G K ++ + F Y E +L+ P E E P + L+++ Sbjct: 57 AFTAMLRGKKHMKLDNKTSYFDYYPGESILVA---PGETMVIDFPEADETPTQCISLSLN 113 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLDV-MERPLDARIL 178 +++ L + + I ++ + A ++ + M+ I+ Sbjct: 114 PDFIEDSLNYLNYHLPKVDEASQWNIQLDEYFLFNNKALASATNNIMRIAMDDNSQKDIM 173 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQ--THFSLISRVLKRIENKYTENLSVEQLAAEA 236 ++E+L ++ ++V + + S I V+ I+ + LS++ +A A Sbjct: 174 ADFALKELLIRLMQTQA----RSMVEKNIVKNKSRIGFVVDYIKTNLHQKLSIDSIAKLA 229 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 +S S F FK TSP ++ R+++A+ ++ A + G+ + F+R Sbjct: 230 YVSKSNFFKMFKDELGTSPNDFILQERINRAKELL-ASQTSIKETAFQTGFSDTNYFTRV 288 Query: 297 FKRYFGVTPGEDAARM 312 FK+ GVTP RM Sbjct: 289 FKQLEGVTPKSYQDRM 304 >UniRef50_C9B1F2 Transcriptional regulator n=4 Tax=Enterococcus RepID=C9B1F2_ENTCA Length = 278 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 5/163 (3%) Query: 149 INSATLSEEILCAAERLLDVMERPLD-ARILGKQIIREILYYVLTGPCGGALLAL----V 203 + ++L A +L+ D +++ K ++ E+L Y+L G + L Sbjct: 108 LELGKYHHQVLEKAWQLVRESSEERDEFQLMQKAVLMEMLVYILRGLNEDHINVLPYLSK 167 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S++ +++ + +EN Y E +++E+LA + +S + FK T SP+ YL R Sbjct: 168 SQRRQQQIVNYTVYYLENHYKEEITLEKLAQDQFLSPTYLSKIFKEATGVSPINYLIEIR 227 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 L +A+ M+ ++ + A VGY+ A FS+ FK+ +GV+P Sbjct: 228 LKRAKDMLKNENLTIKEVASAVGYQDAYHFSKSFKKLYGVSPS 270 >UniRef50_A6FIS9 Putative transcriptional regulator (AraC/XylS family) n=1 Tax=Moritella sp. PE36 RepID=A6FIS9_9GAMM Length = 309 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 108/258 (41%), Gaps = 11/258 (4%) Query: 67 EPGIIILFSGHKIGYINERVFRYD--ANEYLLLTVPLPFECET-YATSEVPLAGLRLNVD 123 +P + +G K+ + + + D +E +L E + A+ P L + + Sbjct: 52 QPLFCAMLTGKKVMHTQDSSYDSDFVPHESFVLAPSQSVEIDFPVASLAAPTRCLAIEIT 111 Query: 124 ILQLQELL----MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVM--ERPLDARI 177 ++ ++ + + F P + + + +R+ ++ + P D Sbjct: 112 TERINQIADNLNAQVEKYSEFGPWQYQQQLLHTHHNAQTQALLQRMTELYIGDDP-DRSY 170 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 + + E+ +L +++ +Q S ++ + I E + +EQL + Sbjct: 171 MINLAVSELTVRLLRQQSRDFMMSFCQQQPDHSGLTMAIDYINQHLHECIEIEQLCRISC 230 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 M + F + FK +PL + + RL KA +I GM+ + + +G+ S+S FSR F Sbjct: 231 MCRTKFFNQFKLQFGCTPLAFQQQQRLKKATELIK-TGMQITLVSFELGFISSSHFSRIF 289 Query: 298 KRYFGVTPGEDAARMRAM 315 KR++G++P R + M Sbjct: 290 KRFYGLSPKSYQHRHKTM 307 >UniRef50_A3DIQ4 Transcriptional regulator, AraC family n=3 Tax=Clostridium thermocellum RepID=A3DIQ4_CLOTH Length = 204 Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 9/157 (5%) Query: 158 ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS---- 213 I + RI+G + I E L ++ C + +V +T +LIS Sbjct: 44 ISHEVMVYIKKFITEYQERIIGYKDILEALSEII---CHSLIRGIVGVKTEKNLISDNFE 100 Query: 214 --RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 +++ + + + ++VE+LA + NMS S F FK +T SP+ YL N R+ KA+ ++ Sbjct: 101 IENIIEYMHQHFGQKITVEELAKKTNMSKSHFIRVFKKITGLSPMDYLINIRIEKAKKLL 160 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 S + G+ S S FS F + GV+P + Sbjct: 161 GAGTKNISEISFLCGFNSLSHFSSTFSKIVGVSPSKY 197 >UniRef50_Q2SKY5 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKY5_HAHCH Length = 302 Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 23/257 (8%) Query: 71 IILFSGHKIGY---------INERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN 121 + SG KI + + + F E +++ P A + P + L + Sbjct: 51 CGMISGRKILHGRDDYTAEFLPQESFVMAPGET--ISIDFP-----DAELDRPTSCLTVE 103 Query: 122 VDILQLQELLMDIG-----EDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDA 175 + ++ + + + + + ++ ER++ E D Sbjct: 104 ISRTRVDSICSHMNKVAPLHKDFEEWRYRTETLIHTPHTQATQALLERMIATFSENGPDR 163 Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 IL + E++ +L LL RQ + ++ L I+ T+ L ++QL Sbjct: 164 DILIDLGVSELVVRMLRQQTRAFLLGACERQPDINGLAAALSHIQKHITQPLDIDQLCKI 223 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 A MS S F FKS +P ++ + RL +A + G + +GY + S FSR Sbjct: 224 ACMSRSRFFTEFKSHFGCTPAEFQQQLRLQRAGERLRQ-GESVTRVCFDLGYRNLSHFSR 282 Query: 296 EFKRYFGVTPGEDAARM 312 F+R +G +P + ++ Sbjct: 283 RFQRQYGRSPSQYQKQL 299 >UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=Q13QC7_BURXL Length = 307 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 11/220 (5%) Query: 100 PLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEIL 159 P P + S+ PL+ + L+++ + + + + + + L +L Sbjct: 90 PAPISWRWRSISDEPLSTVHLHIERSLIDSVAEQMELGGSRELVLGDAMQFRDPLVAAML 149 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFS--------L 211 A R P D+R+ ++ + ++L G A S + Sbjct: 150 AALHR---AAADPADSRLFVDALVHALAAHLLQHYSRGRSAAAGSPAGLPACPERFVPRR 206 Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I RV I +L++ +LAA+A +S F F+ T +P +++ RL +A ++ Sbjct: 207 IRRVTDYIRANLAGDLAISELAAQAGLSSFHFARVFRRETRETPHRFVTRLRLEEAARLL 266 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 A+ VG+E+AS FS +FKR +GVTP R Sbjct: 267 HATDQTVLQIALAVGFENASHFSVQFKRDYGVTPLAYRLR 306 >UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC3_DESAD Length = 293 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 49/276 (17%), Positives = 113/276 (40%), Gaps = 9/276 (3%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 + V+ ++ + + ++ + G K + + E E Sbjct: 22 ITFVQFQSRKSKIRHEVCVSQHSLVFVLEGTKYIHSADGDMVIRKGEAFFCRKGCHLMSE 81 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 + D L + + +++ S S ++E++ +L Sbjct: 82 MIPEDGGTFDTVLFFFDDAILGNFVDQLSAEKNQIASTDRSAFRI-KVTEQVSIYLSSML 140 Query: 167 DVMERPL--DARILGKQIIREILYYVLTGPCGGALLA--LVSRQTHFSLISRVLKRIENK 222 + + PL + L + + E+L+Y+ T ++ + R + +S V++R Sbjct: 141 SLFDSPLGKNDDFL-RLKVNELLHYIYTASGNDEFVSFLVACRNSSRGDLSAVMERY--- 196 Query: 223 YTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAA 282 + +N+S+E +A + S+S+F FK +T+P ++++ R+ A ++ + + + Sbjct: 197 FNKNISLETVAELSGRSLSSFKREFKKTFNTTPARWIRERRMSWAEQLLRNSAKSITEIS 256 Query: 283 MRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 GYES S FS F++ +GVTP E A + + + + Sbjct: 257 YESGYESLSHFSTLFRKNYGVTPREYRAELNSAKSD 292 >UniRef50_C6QSM7 Transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QSM7_9BACI Length = 550 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 61/251 (24%), Positives = 101/251 (40%), Gaps = 22/251 (8%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQ 128 +I++ SG ++ ++ + + P E A L D+ Q+ Sbjct: 48 LIVVKSGQGRLTLDHDEYQLRPDTVYVCA---PGETYGIEAEKASQLKLFLFKFDVFQVT 104 Query: 129 ELLMDIGE---DEHFQPSMAASGINSATLSEEILCAAE---RLLDVMERPLDARILGKQI 182 E + + E P I+ A + A R D +E R + Sbjct: 105 EQGYERVQGIKKERLFPLKGEIQISPAGQLVSLCDAIYDHWRSEDGLE-----RFYSQFA 159 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 +E+LYY++ L ++++ SL + +E + ENL++EQLA AN+S Sbjct: 160 FQELLYYIMKN------RRLQAKESRTSL-ELAKEYMERYFNENLTIEQLARIANISPKY 212 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 F FK S + YL R++KA+ ++ K A +VGY FSR+FK+ G Sbjct: 213 FVDLFKKTYGISAIDYLTELRINKAKQLMAQSDAKLRDIAHQVGYNDEFYFSRKFKKKVG 272 Query: 303 VTPGEDAARMR 313 VTP R Sbjct: 273 VTPTVYMKSRR 283 >UniRef50_C9RVZ3 Two component transcriptional regulator, AraC family n=4 Tax=Geobacillus RepID=C9RVZ3_GEOSY Length = 513 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 53/111 (47%) Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 +Q + + + I+ Y E L++E++A +A +S F FK + + Y+ N R Sbjct: 402 RQQQAYGKLGKAKDYIDRHYAEPLTLEEVAEQAGISPYYFSKLFKEHFGITFIDYVTNVR 461 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 + +A+ + VGY + FSR FK+ G++P E +++A Sbjct: 462 IERAKEALAETDQSLKEICFSVGYNDPNYFSRVFKKQTGLSPSEYRKKVQA 512 Score = 41.3 bits (96), Expect = 0.051, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 263 RLHKARMMIIH---DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 +L KA+ I + + A + G S FS+ FK +FG+T + +R + Sbjct: 409 KLGKAKDYIDRHYAEPLTLEEVAEQAGI-SPYYFSKLFKEHFGITFIDYVTNVRIERAK 466 >UniRef50_A6EQ46 Putative transcriptional regulator (AraC/XylS family) protein n=2 Tax=Bacteroidetes RepID=A6EQ46_9BACT Length = 298 Score = 147 bits (371), Expect = 6e-34, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 103/257 (40%), Gaps = 20/257 (7%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLL------LTVPLPFECETYATSEVPLAGLRLNVD 123 + ++ GHK + F + +L+ T+ +P A+ P L L + Sbjct: 40 LTLMLQGHKTIETDNVKFEFFPGSFLIPEKETINTISIP-----NASVNNPTKCLVLELT 94 Query: 124 ILQLQELLMDIGEDE------HFQPSMAASGINSATLSEEILCAAERLL--DVMERPLDA 175 LQ + DI H +P+ I + + ++ A RL + + + Sbjct: 95 PSYLQSIYEDILHTTNNSQLLHNEPTDGDKKIFVSN-DKLLIQAFTRLYKHQLEHKTANK 153 Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 ++ II+E+L + L + + + +V+ I+N E L+ E+L Sbjct: 154 SLIDDLIIKEVLLRLFCTEGLNLLKMDFEQSIEDTAVRKVISFIQNNIKEKLTTEKLTEI 213 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 + + + F FK T +P+ Y+++ R+ +A++MI + A + G+ S F Sbjct: 214 SGLGQTTFFKKFKVCTGHTPIDYIRHERVRQAKIMIKKGNYRLQEIAYKCGFNSYEYFCS 273 Query: 296 EFKRYFGVTPGEDAARM 312 FK+ P + ++ Sbjct: 274 SFKKIEKAKPSDFKKKI 290 >UniRef50_Q2S2I5 Transcriptional regulator, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2I5_SALRD Length = 261 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 17/247 (6%) Query: 74 FSGHKIGYI-NERVFRYDANEYLLLTVPLPFECETY---ATSEVPLAGLRLNVDILQLQE 129 G + E +A E L++ P + T A E P + L +D Q++ Sbjct: 14 VDGTARVDVEGEEGLAVEAGESLVVP---PLQTITVDFPAAHEDPARYVVLRIDRSQVRS 70 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSE--------EILCAAERLLDVMERPLDARILGKQ 181 +L + D P++ G + +L L E P + L Sbjct: 71 ILDRVASDVPSGPAVQDGGRDDPAYFHVPENEGIARVLNMVAYLFR--EDPPNRDRLIDL 128 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 E+L +L L+ + R T ++ ++ I++ ++S+++L EA MS S Sbjct: 129 NAMELLIQMLQTASRPLLVGELPRNTSAGGLAAAVQYIQDNLDRHISIDELVEEACMSKS 188 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 +F+ +F SPL+Y+ R+ +AR ++ + + +G+ S S F FK + Sbjct: 189 SFYRHFSDEFEMSPLEYITRERVVRARELLADSDNTVTNVSHALGFSSTSHFIDMFKEHE 248 Query: 302 GVTPGED 308 GVTP + Sbjct: 249 GVTPKQY 255 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 101/238 (42%), Gaps = 16/238 (6%) Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ--ELLM 132 G + I + + +E+++ P ++ ++VP L L + ++ ++L Sbjct: 43 QGRRQHIIEDSQYILQPDEFII--FPPFVMHHSFEENDVPFRRLLLYFNPEVIRSPQILR 100 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + E A L ++IL ER L +R L ++ + ++ Sbjct: 101 TLSERARVYKLPRAQSAPIYNLMKDILQEQER------DDLYSRELITLMVNALALQLVR 154 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 +R + ++ ++ + +TE++++EQLA +S FK TS Sbjct: 155 NS------DEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYVSQYHLCREFKRYTS 208 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 ++ +QY+ N R+ A+ ++ + + RVG+ + + F+R +K G++P ++ Sbjct: 209 STIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYKSVTGMSPSQNKQ 266 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 26/255 (10%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 I I+ G ++ + L+ P C++ + V+ L+ Sbjct: 41 SIGIVLEGKRVIDQKGASVVIGPKDVFLINPGEPHACKSEDGKHT---YFTICVEPEALK 97 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLD--------ARILGK 180 I E P + A EE+ + ++++ IL Sbjct: 98 SFASQISEKAQETPYFS----CLAAKDEELNSLIREFMTLVQKSGSTMEKEASLISILST 153 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 I+R G + H ++R + I+ Y ENL++++LA A +S Sbjct: 154 AILR----------YGDNPPEIRRISPHVQAVNRAREYIKTHYAENLTLKELAGVACLSP 203 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 F F SP +L YR+ KAR M+ G + AA+ VG+ S F+R FKR Sbjct: 204 FYFQRLFLENVGISPHDFLIQYRIKKAREML-DQGSSLADAALDVGFTDQSHFTRAFKRV 262 Query: 301 FGVTPGEDAARMRAM 315 G++PG ++ M Sbjct: 263 TGISPGRYIRNLQDM 277 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 51/291 (17%), Positives = 109/291 (37%), Gaps = 7/291 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI-NERVF 87 + + + LK ++ P V + + +E I++ +G K +I E + Sbjct: 1 MPEMIPTLKKEDWFHPDGFPIV-VERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSY 59 Query: 88 RYDANEYLLLTVPLP---FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE-HFQPS 143 + ++ P + + + L L + I LQ L Sbjct: 60 ELVTGDTFVIGGDRPHDYLNMDQLSLINILFDPLELPLSIGDLQSLSGYHALFTLEPAWR 119 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILG-KQIIREILYYVLTGPCGGALLAL 202 + L+ L R ++ +++ L R G + + + ++T + Sbjct: 120 KRHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCYIRTR 179 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 I+ + I+ + +S++ L + MS F F+ TSP++YL Sbjct: 180 NPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKYLIQV 239 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 R+ +A ++ + A VG+ ++ FSR+F+ + G++P E +MR Sbjct: 240 RIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 20/258 (7%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPL-------AGL 118 YE +I++ G + ++ + + +++L+ LP + +++ + Sbjct: 44 YE--LILIEEGKGLSFVGDSIQELSPGDFMLIGKNLP---HLWLSADEYYQNSGLVSRSV 98 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 D L DI E E+ + S I A + L + + Sbjct: 99 YTQFDDRIFPASLHDIPELENIYSLLKKSQKGVFFTGGSI-EALKELFRSLVTKEGFEKI 157 Query: 179 GKQIIREILYYVLTGPCGGALLA----LVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 +LY L+ C A L + S T +I++V I Y N+++E +A Sbjct: 158 EGLYT--LLYR-LSSECNHATLTTENYINSDSTEDPIINKVHLFINKNYQNNIALEDIAC 214 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 M+ SA +K T +YL R+ A ++I+ + S A GY S S F+ Sbjct: 215 NVGMNPSALCRYYKKHTGKRMFEYLTELRISYATKLLINKNINISQVAYDCGYNSLSHFN 274 Query: 295 REFKRYFGVTPGEDAARM 312 +FK+ G TP E A ++ Sbjct: 275 HQFKQVTGYTPSEYAQKL 292 >UniRef50_A6W0F8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0F8_MARMS Length = 307 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 109/279 (39%), Gaps = 19/279 (6%) Query: 42 SLSGLLPDVRLLYGETPFARTPVMYEPGI-IILFSGHKIGYINE-RVFRYDANEYLLLT- 98 +G ++ + + + + + + +G K+ + E + +E +L Sbjct: 27 CFAGPHSELSIYDTYEQAQKVSLKADSLLYCGMVTGAKVMHTKEHDNIPFLPHESFILAP 86 Query: 99 -----VPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG----EDEHFQPSMAASGI 149 + P A P L + + ++ ++ + E ++ + Sbjct: 87 KEEVFIDFP-----EAQFHRPTTCLTIAISQERVAQICDRMNDIMVESFPSGVALDPNQH 141 Query: 150 NSATLSEEILCAAERLL-DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 ++ +RL D + D +L + E++ ++ ALL Sbjct: 142 LHTLHTQATQQVIDRLTSDFLRNDPDRDLLVDFGVSELVTRIIRHHGRDALLRFTQHSPD 201 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 + ++ V++ IE + L + QLA A MS S F+ +FK +PL+Y R+ +A Sbjct: 202 ANGLTCVIQWIEQNLAQPLDINQLAKMACMSRSRFYESFKRQLGCTPLEYQHQRRMSRAY 261 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 + + + + +GY S S FSR F ++FG++P + Sbjct: 262 QRL-QEKCSVTEVSYELGYLSLSHFSRRFHQHFGMSPRQ 299 >UniRef50_B0K234 Response regulator receiver protein n=8 Tax=Thermoanaerobacteraceae RepID=B0K234_THEPX Length = 537 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 62/108 (57%) Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 ++++ + I+++++ IE+ + ++++++ +A E NMS F FK T + + YL N Sbjct: 418 INKEKMDTFIAKIIRFIEDNFNKDITLDDVAKEVNMSYHYFSKFFKDQTGKNFIDYLTNL 477 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 R+ KA+ ++ + + +VGY + FS+ FK+ G+TP E + Sbjct: 478 RVTKAKELLEDETVSIKEVCYKVGYSDPNYFSKIFKKATGMTPTEYRS 525 >UniRef50_A1ZXA6 Probable transcriptional regulatory protein, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZXA6_9SPHI Length = 290 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 4/237 (1%) Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDI 134 GHK Y ++ + A E + E +A + + L + + Q+L + Sbjct: 51 QGHKEVYAPQQKIQLKAGEGFFIRKGQYLMSEKFAQTAQYYSSLMVFFNDDIAQQLSAPL 110 Query: 135 GEDEHFQPSMAASGINSATLSEE--ILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 S + S AT + + P + + K ++E+ + + Sbjct: 111 LGHSSPTASASLSLFKLATSDHTQVFSHSLTNYFGA-DLPPNFDDMLKIKLQELFWILSQ 169 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 G G + A + + IS + + +E Y E + +EQLA S+S F FK V Sbjct: 170 GAKGSSFKAFLKSLQNDQAIS-LTQLMEQHYREPMPLEQLAFLGGYSLSTFKRKFKEVFQ 228 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 SP +++++ RL +AR ++ + VG+E+ S F + FK FG TPG+ Sbjct: 229 QSPSRWIQSRRLQEARFLLTSTQKNITEVGYEVGFENISHFIQVFKTAFGATPGDFR 285 >UniRef50_UPI0001692E87 YbbB n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E87 Length = 528 Score = 144 bits (364), Expect = 3e-33, Method: Composition-based stats. Identities = 54/241 (22%), Positives = 95/241 (39%), Gaps = 20/241 (8%) Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ-ELLMD- 133 G I +R + V + +T S G +D+ ++ ++ D Sbjct: 38 GEGRLNIGLHEYRLRQD-----AVHIALPGQTIGVSSEETGG----LDLYVIRFDVCRDS 88 Query: 134 -IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + P I S T ILC + E+ L+ R + +E+LY+++ Sbjct: 89 GLAGKGDTFPLKGEFPIYSET-QMAILCESLYFCCSSEQTLE-RFRAQSAFQELLYWIMK 146 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 L + + R ++N Y ENL++EQLA A +S F FK Sbjct: 147 N------FRLQPDSDSRTALDRTRSYMDNHYNENLTIEQLAHMAEVSPKYFVDLFKKTYG 200 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 S + Y+ R++ A+ +++ + A +VGY FSR+FK+ G++P Sbjct: 201 KSAMDYVTEVRVNSAKKLMVRSDARLRDIAHQVGYNDEFYFSRKFKKEVGMSPSAYMKNR 260 Query: 313 R 313 R Sbjct: 261 R 261 >UniRef50_B0NX83 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX83_9CLOT Length = 539 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 12/165 (7%) Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 G+ A + +++ V A + + II+ I + + Sbjct: 384 GVEKANIDRTFKDYKQQIAAVSTGEKAAEYIEELIIQAI-----------RMRNERLGKK 432 Query: 208 HFSLISRVLKRIENKYTEN-LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 H SLI+ + I Y E LS+ +A + +S S F FK T S +++L + R+ K Sbjct: 433 HSSLITEAKEFIVKNYQEETLSLSDVADQVGLSSSHFSTTFKQETGESFVEFLTSVRMDK 492 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 A+ M+ MKAS + VGY+ FS FK+ G TP E +R Sbjct: 493 AKEMLCFTDMKASQISYEVGYKDPHYFSYLFKKTQGCTPSEYRSR 537 Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 31/99 (31%) Query: 245 HNFKSV--------TSTSPLQYLKNY-----RLH-------------KARMMII----HD 274 FK T +Y++ R+ +A+ I+ + Sbjct: 392 RTFKDYKQQIAAVSTGEKAAEYIEELIIQAIRMRNERLGKKHSSLITEAKEFIVKNYQEE 451 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + S A +VG S S FS FK+ G + E +R Sbjct: 452 TLSLSDVADQVGLSS-SHFSTTFKQETGESFVEFLTSVR 489 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 98/265 (36%), Gaps = 10/265 (3%) Query: 53 LYGETPFARTPVM----YEPGIIILFSGHKIGYINERVFRYDANEY-LLLTVPLPFECET 107 F R ++ E II + SG+ +++ R DA L++ + T Sbjct: 22 YRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSM--HGGT 79 Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 + L ++ L + + SA SE A + Sbjct: 80 PKDNCR-YDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSAD-SEPAKDAKAVIDA 137 Query: 168 VMERPLDARILGKQIIREILYYVL-TGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 ++E+ + +L +++ + S V+ IE Y +N Sbjct: 138 MLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKN 197 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +++E+LA E M+ + F FK T +P++YL +R+ A +I K AM+ G Sbjct: 198 ITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCG 257 Query: 287 YESASQFSREFKRYFGVTPGEDAAR 311 + S F + FK GVTP + R Sbjct: 258 FNDYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 14/242 (5%) Query: 80 GYINERVFRYDANEY-LLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + R F E+ + + L E S P + + L L DI + Sbjct: 52 LTVRGRSFTLHPGEFCFINSGEL---HEIK--SGGPSLHHAIVFNPDILDFTLYDICQHS 106 Query: 139 HFQPSMAA-------SGINSATLSEEILCAAERLLDVMER-PLDARILGKQIIREILYYV 190 +P + + S S+ IL + ++ + P A + K I +IL Sbjct: 107 FIRPVTSGNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELF 166 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 C + + + +V++ I Y +S+ LA MS + F H FK Sbjct: 167 FQADCFLENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQE 226 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 P+ ++ YR+ KA ++ + S A+ VG+++ S F R+F+ Y VTP E + Sbjct: 227 IGKPPIAFINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRS 286 Query: 311 RM 312 + Sbjct: 287 HL 288 >UniRef50_C7IFZ3 Transcriptional regulator, AraC family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFZ3_9CLOT Length = 296 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 21/262 (8%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 ++I+ +G +N F + + + L Y + + +L E Sbjct: 39 LVIVLNGTATHIVNSEEFFIKKGDVFVFNMDL---SHGYKDPHN-FKIINIMYKPERLDE 94 Query: 130 LLMDIGEDEHFQPSMAASGI--------NSATLSEEILCAAERLLDVMERPLDARILGKQ 181 + DI + +Q N+ +LS L L + + G Q Sbjct: 95 ICNDIKKSPGYQALFVLEPFFRKKYSFSNTLSLSISSLEYVAELGARINEEYKRKDQGYQ 154 Query: 182 II-----REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236 + E++ Y+ ++ F +++ + +E+ Y + +E+LA EA Sbjct: 155 TMIYARFMEMVVYLSR----QYIIENKLLHDTFVHLAKAILFLEDNYLNPIKLEKLADEA 210 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 +MSV F+ FK T+P + + R++ A ++ + + + A+ G+ ++ FSR+ Sbjct: 211 HMSVRHFNRIFKENYGTTPFNCILHLRVNHACSLLKNSNLCIADIALESGFSDSNYFSRQ 270 Query: 297 FKRYFGVTPGEDAARMRAMQGN 318 FK+ G+TP E AR + + N Sbjct: 271 FKKITGITPKEYRARYKLIYSN 292 >UniRef50_A5GD53 Transcriptional regulator, AraC family n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GD53_GEOUR Length = 291 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 13/237 (5%) Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETYATSEVP-LAGLRLNVDILQLQELLMDIGED 137 I + + + + E A E P + ++ D+ + ++G Sbjct: 66 RLAIGGKTVLSQPGQIMAIDPDA-VHHEMTA-DETPRYIAIFIDRDLFE-----KELGRY 118 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARI-LGKQIIREILYYVLTGPCG 196 +P + T E++ + ++ E L AR L I I++ ++ G Sbjct: 119 PSIRPR--PFRFRTFTPGREMMGLLKEFMNEAEARLPAREPLLAAIGTRIVHALIRAAHG 176 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 ++ + + I RV++ I+ + LS+ QLAA A MS S F FK T PL Sbjct: 177 --IITPDASIGNRVEIHRVIEYIQTHAGKKLSIGQLAAVAAMSTSHFSRIFKRETGHPPL 234 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 YL RL +AR ++ ++ A+ G+ S S F+ F+R++G +P + + Sbjct: 235 AYLNRVRLEQARKLLRTGECSVTSVALSCGFASPSHFTDSFRRFYGQSPTDFLKSYK 291 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 143 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 53/254 (20%), Positives = 96/254 (37%), Gaps = 22/254 (8%) Query: 65 MYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDI 124 +Y+ I + SG I + F + L + A P + + Sbjct: 42 IYK--IHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIFYQ--ADEVDPWTYSWIGFNG 97 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 Q+ E+L P+ +++ + + L +++ ++ ++ Sbjct: 98 EQVAEILSRT----RLTPASPVLPMDTHLMPQ--------LYELLNEAEESNTTRDLRLQ 145 Query: 185 EILYYVLT-----GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 +LY +T P G Q + I R L + + Y+E +SV QLAA + Sbjct: 146 TLLYEFMTLLVELVPASGD-ADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLD 204 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 FK T P QYL YR+ KA ++ + + A VGY+ A FS+ FK+ Sbjct: 205 RKYLSSLFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKK 264 Query: 300 YFGVTPGEDAARMR 313 G +P + + + Sbjct: 265 TVGTSPSDYREQWQ 278 >UniRef50_A1B409 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=A1B409_PARDP Length = 294 Score = 143 bits (361), Expect = 9e-33, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 12/256 (4%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLP--FECETYATSEVPLAGLRLNVDILQL 127 I ++ + YI + V + + ++ LP + + VPL L + + Sbjct: 38 IHLVVATSGTFYIGDHVGSFRPGQLIMTGPNLPQNWISDIPPGEAVPLRSLVIQFPEAFI 97 Query: 128 QELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ-IIREI 186 E + E + P + S + R+ +MER ++A+ L + + EI Sbjct: 98 DEASTAMPEMQALGPLLERSRRGLLFDDA----TSARVRPLMERLVEAQGLRRLALFWEI 153 Query: 187 LYYVLTGPCGGALLALV----SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 L + P L +L + H I+R L + TE + +LA S SA Sbjct: 154 LDLLANAPEYEVLASLSFELDLTRIHDGGINRALGYLREHLTEQIEEGELAEMVGQSQSA 213 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD-GMKASAAAMRVGYESASQFSREFKRYF 301 F FK T T+ ++Y R+ A M++ D +K + VG+ + S F+R F + Sbjct: 214 FSRAFKRHTGTTLVRYRNQLRVDLACQMLLTDPDIKVAEICYEVGFSNLSNFNRHFLKLK 273 Query: 302 GVTPGEDAARMRAMQG 317 G++P + A A + Sbjct: 274 GMSPSQFRATFAAQKA 289 >UniRef50_B4AG99 Transcriptional regulator n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AG99_BACPU Length = 302 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 97/248 (39%), Gaps = 29/248 (11%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGL--RLNVDILQ 126 G ++ G IN + + + +T + + SE L LN D Sbjct: 79 GFLLSIRGEARLNINGKSYDLQPGSVMHVTPGCQLALQVISQSEYEYHSLFYHLNCDKES 138 Query: 127 LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARI-LGKQIIRE 185 + + + I+ LL ++ + + A +GK ++E Sbjct: 139 DCDTAFKL----------------ETGANPRIIE----LLTMLHQNVHAPGGMGKLRVKE 178 Query: 186 ILYYVLTGPCGGALLALVSRQT--HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 + +L L+ +++ + +I + I +Y L+++ LA +M+ +F Sbjct: 179 LFLRIL----YQMLMGCKQKESSPNERIIEEAVAYIRGQYMNPLTLQDLAELCDMNPKSF 234 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 + F T P+ Y+ YR+ +AR ++ + +M VGY + FSR FK+ FGV Sbjct: 235 SYFFHKYTGLHPIDYVIQYRMERAREILKAGNIPIRDVSMTVGYPNPLYFSRLFKKKFGV 294 Query: 304 TPGEDAAR 311 P A+ Sbjct: 295 PPSAYTAK 302 >UniRef50_A5V467 Transcriptional regulator, AraC family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V467_SPHWW Length = 296 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 3/194 (1%) Query: 122 VDILQLQELLMDI-GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDA-RILG 179 D+ EL+ E P+ IL + +L + P L Sbjct: 103 FDVYLPYELMQAAWAEHFKGDPARVNLQAKLVFEDPSILLLMQSILSTILSPRPISAFLM 162 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFS-LISRVLKRIENKYTENLSVEQLAAEANM 238 + I ++ +L G ++ +R S ++ RV +E E++S++ LA EA + Sbjct: 163 ETITNHLISSLLCSENGAIVVRPAARSVLSSPVLQRVKDYVEAHIAEDISLDMLAREAGV 222 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 S F FK +P YL R+ +A +++H A+ G+E S F+ F+ Sbjct: 223 SRFHFIRLFKDSVGMTPHAYLIERRMVRACNLLMHTKQSIGEIAVNCGFEDPSYFAARFR 282 Query: 299 RYFGVTPGEDAARM 312 R + + P E R+ Sbjct: 283 RLYRMCPREFRKRL 296 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 22/161 (13%) Query: 180 KQIIREILY--YVLTGPCG-------GALLALVSR-------------QTHFSLISRVLK 217 Q +RE LY Y+ GP G L ++ + + +K Sbjct: 121 PQAVREALYNIYLSRGPEPQCEALMTGYLYIFMAHLMKEARDAMPNVGSSSSQYVLSAIK 180 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 I+ Y+ ++SV+ +A +S S + F + SP+ YL NYR+ +A ++ + + Sbjct: 181 YIQFNYSHDISVDDIAKAVGVSRSHLYRVFMANVGQSPIDYLTNYRISEACSLLKNSNLS 240 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A+ VG+ FSR FK+ GV P + A + Q Sbjct: 241 IAEIAVSVGFFDQFYFSRVFKKVKGVPPSKYLATLEKEQSK 281 >UniRef50_C6JEP4 Two component transcriptional regulator n=3 Tax=Clostridiales RepID=C6JEP4_9FIRM Length = 531 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 52/103 (50%) Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 S+I R + I + ++S++ ++ E ++S F FK T + ++YL RL AR Sbjct: 428 SIIDRAKEYINENFRRDISLDDVSREVDISPYYFSKLFKQETGKNFIEYLTEIRLKNARE 487 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 ++ + + GY + FSR FK+Y GVTP E R+ Sbjct: 488 LLQDSRLSIKEICAQSGYSDPNYFSRIFKKYEGVTPSEFRERL 530 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 94/247 (38%), Gaps = 18/247 (7%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDILQLQ 128 I ++ SG I + R + + P + A + P + + Sbjct: 45 IHLVVSGKGIFEVGGRTWEVSEGDLFFAR---PSQLIRYTADEQQPWEYSWVGFNGACAH 101 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL--DVMERPLDARILGKQIIREI 186 +L + P + ++ + + + A + ++ +A ++G + Sbjct: 102 KLAAQL-------PFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYL--F 152 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 + ++ G + + + +K I+ Y+ ++S++ +A +S S + Sbjct: 153 IAALMRETSAGKPH---TASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLYRV 209 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 F SP+ YL YR+++A ++ + + A+ VG+ FSR FKR GV P Sbjct: 210 FMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPS 269 Query: 307 EDAARMR 313 + A + Sbjct: 270 KYFAAQQ 276 >UniRef50_A8ZMX0 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMX0_ACAM1 Length = 328 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 24/265 (9%) Query: 63 PVMYEPG-IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN 121 P++ E G ++I FSG + EY+L +PF C A S L L Sbjct: 75 PMVVEAGEMVICFSGSPHQISQGTEPPSISVEYVLSGGEIPFRCSADARSSS-LLCL--- 130 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 I L++ + P + + ++ + + A + +++P G Sbjct: 131 CGIFYLRD--TYLNPLFAALPPVLHAPVSQVESFQNLTGVASLIAKELDKPSA----GSS 184 Query: 182 IIREILYYVLTGPCGGALLALVSR----------QTHFSLISRVLKRIENKYTENLSVEQ 231 + E L +L C GA+ + ++R +ISR L +I + + SV+ Sbjct: 185 FMVERLLELL---CAGAVRSYMARLHPQDPSWLTGLRDPIISRALAKIHAQPGHDWSVDS 241 Query: 232 LAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESAS 291 LA +S S F FK+ P+ Y+ +RLH A ++ A VGY++ + Sbjct: 242 LAQSVELSPSRFAARFKTTLGEGPMTYVSKWRLHIASRLLNRTEKNIYEIASDVGYDNLA 301 Query: 292 QFSREFKRYFGVTPGEDAARMRAMQ 316 F+R FKRYFG PG R +++ Sbjct: 302 AFTRAFKRYFGEPPGAWRTRHESVR 326 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 34/268 (12%) Query: 66 YEPGIIIL-FSGH--KIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLR--- 119 Y P I ++ +G K I V Y + +L+ LP T A + + Sbjct: 39 YHPEIELVYVNGGNGKR-QIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNTSESVVQMK 97 Query: 120 ---LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCA-----AERLLDVMER 171 L D + E+ E + +A +G + E+I +RLL ++ Sbjct: 98 TDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIGEKIEILEYKSDFQRLLAILN- 156 Query: 172 PLDARILGKQIIREI----LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENL 227 I+ E+ Y +L L++ ++ I+ + ++ Y E + Sbjct: 157 ----------ILNELGSTSEYQILNAEH----LSVETQSKENERINSIFNFVKENYREPI 202 Query: 228 SVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGY 287 S+E++A +M+V +F FK VT+ + +Q++ YR+ A ++ + M + G+ Sbjct: 203 SLEEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGF 262 Query: 288 ESASQFSREFKRYFGVTPGEDAARMRAM 315 + S F++ FK + G++P E +++++ Sbjct: 263 NNFSHFNKSFKAFTGMSPSEYRNQLKSV 290 >UniRef50_C9XTT1 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XTT1_CROTZ Length = 326 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 25/266 (9%) Query: 71 IILFSGHKIGYINER-VFRYDANEYLLLTVPLPFECETYATSEVPLAGL---------RL 120 + G + +N + R A +++L+ F ET + P + Sbjct: 53 CAVLQGECLMSVNGKAPRRLVAGDFILIPATYAF--ETTSAGAAPPVDFSQPTVLGDGHV 110 Query: 121 NVDILQ-LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER----LLDVMERPLDA 175 + ELLM++G E P A + A L EIL +R L +++ A Sbjct: 111 RIGSTTGPAELLMNVGHCEFDTPDKA---LIVALLPSEILIQGQRRFITLFELLLDESRA 167 Query: 176 RILGKQIIR-----EILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 R G+ ++ +L L + A + R ++ L I K + + Sbjct: 168 RRPGRDVVMMHLLQLLLVESLRSDPALSKTAGILRGLQHDRVATALHLIHEKPGADWQIA 227 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 QLA E MS S+F F SP+QYL +R+ AR +I A+R GY+SA Sbjct: 228 QLARECAMSRSSFFAVFSETVGMSPMQYLFFWRMSLARKALISGQDNIEQIALRTGYQSA 287 Query: 291 SQFSREFKRYFGVTPGEDAARMRAMQ 316 S FS F ++ G+ PGE R R + Sbjct: 288 SAFSVAFAKHAGMPPGEFRRRSRTAR 313 >UniRef50_B4B1U3 Transcriptional regulator, AraC family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B1U3_9CHRO Length = 298 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 5/205 (2%) Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 A + P+ L LN+ L ++ E F + G N + +I A L Sbjct: 98 KAYWDRPVDSLVLNLKPGLLTRNAEELLECNSF-ELLPQFGFNDGLI-HQIGLALYADLK 155 Query: 168 VMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFS-LISRVLKRIENKYTEN 226 + +RP R+ + + + ++L C ++ S + V I +++ Sbjct: 156 L-QRPG-GRLYAEHLANTLAVHLLRSYCSNNRQSIGCWDCFSSKRLKPVFDYIHEFLSQD 213 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +S+ L++ ANMS F FK +T +P QY+ R+ +A+ +++ M + A+ G Sbjct: 214 ISLSTLSSIANMSQYHFSRTFKEMTGLTPHQYVIRQRVERAKQLLLQSKMSINDVAIACG 273 Query: 287 YESASQFSREFKRYFGVTPGEDAAR 311 + S R FKR GVTP + Sbjct: 274 FTHQSHLHRHFKRLIGVTPSAFREK 298 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 103/280 (36%), Gaps = 16/280 (5%) Query: 49 DVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP----FE 104 + L + E ++I+ +G YI V Y A + L+ +P + Sbjct: 15 SLSLAHFPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCD 74 Query: 105 CETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER 164 T A L + + I E + S + + Sbjct: 75 SLTGKNGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRK 134 Query: 165 LLDVMERPLDARILGKQIIREILYYV--LTGPCGGALLAL--VSRQTHFSL---ISRVLK 217 + +++ G IR +L + L +L+A V T + V + Sbjct: 135 QVQRLDKGQ-----GIGRIRWLLALLDTLARSQETSLIASGPVRNGTALRRQETVDTVCR 189 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 + + ENL ++ +A EA M+ SA +F+ T + +L R+ A +++ + Sbjct: 190 YLREHFRENLCLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLS 249 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 SA A G+ + S F+R+FK G TPGE +R+ G Sbjct: 250 ISAIAWETGFANLSHFNRQFKSLTGQTPGEYRKNIRSGVG 289 >UniRef50_C0X5H9 AraC family transcriptional regulator n=22 Tax=Enterococcus faecalis RepID=C0X5H9_ENTFA Length = 272 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 75/147 (51%), Gaps = 5/147 (3%) Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR-----QTHFSLISRVLKRIEN 221 ++ + +++ + K ++ E+L Y+L + +R + +L++ + +E Sbjct: 126 ELNHQEVESALQIKALVIELLVYILRSLAVDQENKIETRLSKTEKRKRNLVNHTIYYLET 185 Query: 222 KYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAA 281 + E +++EQLA ++ + FK+ T P+ YL RL+ A+ ++ +D + Sbjct: 186 HHDEEITLEQLAEMLYVTPTYLSKTFKAATGVGPINYLIQIRLNHAKELLKNDSLSVKEV 245 Query: 282 AMRVGYESASQFSREFKRYFGVTPGED 308 A VGYE A FS+ FK+Y+G +P + Sbjct: 246 AKTVGYEDAYHFSKLFKKYYGKSPSQF 272 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 141 bits (357), Expect = 2e-32, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 89/237 (37%), Gaps = 14/237 (5%) Query: 82 INERVFR--YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + E F+ Y E +++ P +C+ + L L+++ + D+ + Sbjct: 84 LGELSFQGPYGHGELMIIPAHTPQQCQWHQAVSF----LSLSLEPQFFETAAYDLTQVNR 139 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL-GKQIIREILYYVLT--GPCG 196 F+ N A I L + L ++ + +++ Sbjct: 140 FELLP-----NIAVQDRLIYDIGTALRQELNTLEFTDHLYIDSLVTALSIHLMKRYCTQV 194 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L + +L++R L+ I + +NL + LA E MS F FK +P Sbjct: 195 PRLKDSSDQGLPPALLNRALEYINDHLDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPH 254 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 QY R+ KA+ ++ + A + G+ + S S+ F++ GVTP + R Sbjct: 255 QYAIKQRIKKAKGLLRQTNTPIAMIARQCGFTNPSHLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 81/200 (40%), Gaps = 6/200 (3%) Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLDVM-ERPL 173 + D+ L D+ ++ P + E +L + ++ + +P Sbjct: 93 AMVFDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLLSKHKPA 152 Query: 174 DARILGKQIIREILY-YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQL 232 K + +L+ +G + + T + +V+ I++ Y + + +L Sbjct: 153 GYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILYIQSHYHRPIRLSEL 212 Query: 233 AAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQ 292 A MS F FKS+T +P+ Y+ +YR+ +A ++ K S A+ VG+ S Sbjct: 213 ADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALDVGFGHISY 272 Query: 293 FSREFKRYFGVTPGEDAARM 312 F R F++ TP E ++ Sbjct: 273 FVRVFRKIMNCTPSEYRKKL 292 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 97/252 (38%), Gaps = 10/252 (3%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 II + SG +N + N+ + + F +AT++ + + Sbjct: 49 IIWVISGSIKVSVNSTEHILNKNQGIFINAG--FLHSIHATNDGEYVLRSIVFHPRLIGS 106 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEI-------LCAAERLLDVMERPLDARILGKQI 182 + I + +P + + L I + + I + Sbjct: 107 -IDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVWNRLYNTENGFEIYVRNE 165 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 + +++ VLT + + I +L+ I+ ++E +++ LA A +S S Sbjct: 166 LSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQYIQMHFSETITISTLARVALISESE 225 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 F ++P QYLK YR+ KA M+I M + A + G++S+S F++ F+ G Sbjct: 226 VLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQCGFQSSSYFTKTFREQIG 285 Query: 303 VTPGEDAARMRA 314 TP E R + Sbjct: 286 CTPLEYRKRDQQ 297 >UniRef50_A3IBD0 Putative uncharacterized protein n=1 Tax=Bacillus sp. B14905 RepID=A3IBD0_9BACI Length = 640 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 8/214 (3%) Query: 103 FECETYATSEVPLAGLRLN--VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 + A E + + + QE++ + D FQ A + N TL +++ Sbjct: 55 VCIQIVAEKEFEYFLIFYKTTLPLPNRQEIVALLENDNPFQYQYAFAPANPLTLLDKVEQ 114 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 L E+ L R+ K + + +Y +L + + +++ ++ IE Sbjct: 115 MNTVWLQPNEKELK-RLHIKALFYQYIYELLRQMHAQRIHPI-----KPDIVTEAVRYIE 168 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 Y L++E+LA E + SV FK TSP+ YL R++KA +++ Sbjct: 169 EHYQRPLTLEKLAQELSCSVGYLSKLFKEKMHTSPIHYLGVIRINKAAKLLVQTDATLQD 228 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 A VGY SR FKR+ G++P + + Sbjct: 229 IADHVGYPDGYSLSRSFKRHKGISPAQFKRAWKQ 262 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 3/159 (1%) Query: 157 EILCAAERLLDVMERPLDARILG-KQIIREILYYVLTGPCGGALLALVSRQTH-FSLISR 214 E+L +++ +V A L K ++ IL L ++ ++ + + Sbjct: 134 ELLAMLDQIFEVHRNEQAASELTIKGLLFSILAK-LVSLGKPSVRVKPEQEGYRIERLKT 192 Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 V++ IE Y E + +++LA A MS S F FK +T+ SP++Y+ +YR+ +A + Sbjct: 193 VIEYIEQNYAEPIPLQKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQT 252 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K A+ VG+ S S F+ F++ FG TP E +R++ Sbjct: 253 DAKIMEVALDVGFNSLSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 4/160 (2%) Query: 157 EILCAAERLLDVMERPLDARI-LGKQIIREILYYVLTGPCGGALLALVS--RQTHFSLIS 213 I+ L + + L++ LG ++ L +LT G L Q I+ Sbjct: 142 GIIDDVTALFKKIIQELNSHRPLGSHMVNAYLLEMLT-LLGRRLQTAEEPGAQGRHPDIN 200 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 +++ I KY+E+LS+ LA E ++SV F H FK VT +P++Y+ R+++A+ ++ Sbjct: 201 QMIAFIHEKYSESLSISDLAGECSLSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLLSE 260 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + A VGY++ FSR F+ G+ P E + + Sbjct: 261 SSLHVKEVAAVVGYDNPLYFSRIFRSTVGIPPSEYKKQFQ 300 >UniRef50_A7MMI8 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MMI8_ENTS8 Length = 314 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 108/265 (40%), Gaps = 21/265 (7%) Query: 71 IILFSGHKIGYINER-VFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDILQ-- 126 + G + +IN + R A +++L+ FE T T V ++ L D Sbjct: 41 CAVLQGECLMHINGKAPVRLVAGDFMLIPATYTFENTSTGTTPPVDISVPTLLSDGHVRI 100 Query: 127 -----LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER----LLDVMERPLDARI 177 ELLM++G E P A + A L EIL +R L +++ R Sbjct: 101 GATTGPAELLMNVGHCEFDTPDRA---LIVALLPNEILIKGQRRFVTLFELLLDESRNRR 157 Query: 178 LGKQIIRE-----ILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQL 232 G+ ++ +L L A A + R I+ L I +K + + L Sbjct: 158 PGRDVVMTHLLQLLLVESLRSDPELAKTAGILRGLQHEKIATALHLIHDKPGADWQIAHL 217 Query: 233 AAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQ 292 A E MS SAF F SP+QYL +R+ AR + A+R GY+SAS Sbjct: 218 ARECAMSRSAFFATFSETVGMSPMQYLLFWRMSLARKALTSGQDNIEQIALRTGYQSASA 277 Query: 293 FSREFKRYFGVTPGEDAARMRAMQG 317 FS F ++ G+ PGE + R + Sbjct: 278 FSVAFTKHAGMPPGEFRRQSRTARS 302 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 94/244 (38%), Gaps = 15/244 (6%) Query: 73 LFSGHKIGYINER--VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQEL 130 + SG NER + + L+ C A + P + + L+ Sbjct: 46 ILSGRGSFLENERHEAIQLGPGQGFLMPPN--TVCSYTADQDDPWTYCWIEFNGLKAANF 103 Query: 131 LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 + G + + + +++ + + R ++ ++ + + ++ ++ Sbjct: 104 MRQAGLNANNLIFTPHKPMIISSIKDTL-ETIIR----NHSQHESFLIAQLYL--LVDHL 156 Query: 191 LT-GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 + + H I + I++ Y +N SV+QLA +++ + F FK Sbjct: 157 IRFSKHSPQQR---PNEIHSFYIREAIHYIQDHYMDNPSVDQLADICHLNRNYFTRLFKQ 213 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +P Q++ YR++++ ++ A ++GY + FS FKR G+TP E Sbjct: 214 ELHMTPSQFILTYRINQSCELLASTNRSIRDIADQIGYSNQFNFSSAFKRVKGMTPMEWR 273 Query: 310 ARMR 313 R R Sbjct: 274 RRYR 277 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 63/143 (44%) Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 IL ++ + I Y +L L + I +L + Y + +++ Sbjct: 158 SEFGYEILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLN 217 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 +A N+S FK+ SP+QY+ YR+ A M+ + + + VG++S Sbjct: 218 DIAKVVNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSP 277 Query: 291 SQFSREFKRYFGVTPGEDAARMR 313 S FS+ FKR+ G+TP + + + Sbjct: 278 SYFSKIFKRFIGITPTQYRNKSK 300 >UniRef50_Q6FB91 Putative transcriptional regulator (AraC family) n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FB91_ACIAD Length = 219 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 2/171 (1%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L KV+ L E ++ + +P T +Y G+ ++ G K I + V+ Sbjct: 15 RLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTHCIYSMGLSLVLQGQKEVIIGDNVY 74 Query: 88 RYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIG-EDEHFQPSMA 145 + +L + LP A+S+ P + L +DI + EL+ ++ E + + + Sbjct: 75 QCHEGHSMLTMMDLPVTSRIINASSQKPFLAVLLLLDIQVVNELVANLPVEAKTIISNDS 134 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + + ++ A RL+ +++ P L + +EI+ +L G Sbjct: 135 HESFSVEFVDISLIDAVMRLVKMLDEPKMIPHLADLVKKEIIIRLLNSSQG 185 >UniRef50_B9M3B3 Transcriptional regulator, AraC family n=1 Tax=Geobacter sp. FRC-32 RepID=B9M3B3_GEOSF Length = 292 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 5/161 (3%) Query: 156 EEILCAAERLLDVMER--PLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 E++ + + E P +L IR I + +L G + + ++ I+ Sbjct: 134 PELINLLKEFMTEHEAGLPGGEAVLAAVSIR-ITHSILRAAHG--VNSSAPHISNRIEIN 190 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 RV++ + +Y E ++V+++A A MS S F F+ T SP+ YL + RL KAR +++ Sbjct: 191 RVVEYLHRRYGEKVTVDKMATVAAMSPSHFSRVFRKETGLSPMNYLIDLRLAKARRLLVS 250 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 ++ A+R G+ S S F+ F++ FG P + ++A Sbjct: 251 GETCVTSVALRCGFASHSHFTDTFRKRFGCPPSDVMTTVKA 291 >UniRef50_A9U6B0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6B0_PHYPA Length = 404 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 19/244 (7%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQL 127 + + +G ++ + + P T VP + + Sbjct: 61 CLALPITGSVSLNASDGCLQAGPGHMYCIP---PGSKHTYTVDKGVPFRCYWVRFE---- 113 Query: 128 QELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREIL 187 +D G E F+ +++A + L A R L + + + + II E++ Sbjct: 114 ----LDAGSTEFFKSLQLP--LSAAVDEPDQLEARYRRLISLSGNITDELRARAIIMELI 167 Query: 188 Y-YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 Y+ G G + A+ + SL S +L+ IE ENLSV+ LA + + + F Sbjct: 168 AVYLQRGLEGHSSAAVA---SELSLFSEILEYIEQHPAENLSVDDLARQMYLHPNYFISL 224 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 F+S T +P+QY+ ++ AR ++ + A VG FSR FK+ G +P Sbjct: 225 FRSFTGCTPIQYVNQRKMEHARKLLEESTLPVRDIASEVGLTGP-YFSRMFKQLIGTSPR 283 Query: 307 EDAA 310 Sbjct: 284 RYRQ 287 >UniRef50_Q9KE68 Transcriptional regulator (AraC/XylS family) n=1 Tax=Bacillus halodurans RepID=Q9KE68_BACHD Length = 278 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 6/137 (4%) Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 I K + I + +L ++R++ +I +V++ I + Y E ++V++LA Sbjct: 140 EIQAKALFYTIFHDMLICA-----RNRLNRESQL-VIEQVVEYIHHHYMEPMTVKKLADM 193 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 + M V F + FK P+ YL YRL +A+ +++ + A +GY A FSR Sbjct: 194 SGMGVKPFSYLFKKYIGMFPIDYLIQYRLKRAKNLLVSSNSSIADIAESIGYLDALYFSR 253 Query: 296 EFKRYFGVTPGEDAARM 312 FK++ G +P A+M Sbjct: 254 LFKKHIGCSPTAFRAQM 270 >UniRef50_A9KJM4 Two component transcriptional regulator, AraC family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJM4_CLOPH Length = 517 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 55/105 (52%) Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + F+ I +VL+ ++ Y E++++E++A N+S F FK + + YL N R+ Sbjct: 408 ENSFAAIRKVLRYVDTHYDEDITLEEVAGILNISPQYFSRIFKEKMGVTYVDYLTNIRIK 467 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 KA+ +I+ VGY+ + FSR FK+ GVTP + Sbjct: 468 KAQEWLIYSDKNIQEICYMVGYKDPNYFSRVFKKTVGVTPKQFVE 512 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 2/159 (1%) Query: 157 EILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPCGGALLALVSRQTHF-SLISR 214 +I+ R+L E P + L ++ E+ + ++ ++ LI Sbjct: 140 DIIVLLNRILKERENPDIGSEFLNYLLVMELFVLISRALKMEWENSIKNKSPKIKELIQA 199 Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 + I N Y ++S++ +A +S S F FK SP+ YL R+ +A+ ++ Sbjct: 200 SVNYINNNYERDISLKDIARYVFLSTSYFTRAFKEEMGISPINYLLKIRVERAKELLKDT 259 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + S A+ VG+ + +F+ FK+Y +TP + ++ Sbjct: 260 DNRISDIALSVGFSNQQRFNDIFKKYVKLTPLQYRKNVQ 298 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 99/255 (38%), Gaps = 14/255 (5%) Query: 66 YEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVD 123 Y P +I + G I + + + +L+ LP T ++ + + Sbjct: 58 YHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNESTHNEYE-MVIQFK 116 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK--Q 181 L E + DI E + + S EE+ + + M L + + Sbjct: 117 PDFLGEPIWDIPEMQRISALLEKSKAGI-VFGEEVKKRIGKEITEMHETSSLDKLCRFLK 175 Query: 182 IIREIL----YYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 I+ E+ Y +L L ++ I+ + +++ + E +++E++A AN Sbjct: 176 ILDELSVTQDYRILNAGK----YYLQTQVEDNERINLIFNYVKDHFKEAITLEEVADLAN 231 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 M V +F FK +T+ + Q++ YR+ A ++ + + G+ + S F+R F Sbjct: 232 MKVPSFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNFSYFNRTF 291 Query: 298 KRYFGVTPGEDAARM 312 K Y +P + Sbjct: 292 KEYIQKSPSQYRKEF 306 >UniRef50_A6CZX1 Transcriptional regulator, AraC family protein n=2 Tax=Vibrio RepID=A6CZX1_9VIBR Length = 286 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 108/249 (43%), Gaps = 14/249 (5%) Query: 68 PGIIILFSGHKIGYIN-ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQ 126 P + + G K +N + F+Y+ ++++L LP Y L D Sbjct: 43 PRLCTILKGTKSVSVNQSQSFQYNRDQFVL----LPPNSNIYMKMPEYTKALVYEFDEQM 98 Query: 127 LQELLMDIGE--DEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQII 183 ++ + + + + ++ + ++ + I R+ +++ E+ L Sbjct: 99 IEGVSQRVADTLEVDSPTALESQSFAVNSIDKRIDKLHTRMQEILREQEACMDFLIDLTG 158 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 +E+++ +L +++S IS+ ++ + + +++ Q+A E +S S+F Sbjct: 159 QELVFELLRN---NTCQSIISNHRSHP-ISKAIRIMNSPMGLKMTLAQVAEEVGLSQSSF 214 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 FK+ T SP QYL RL ++ + + + + AA GY++ S + R FK +G+ Sbjct: 215 SQKFKAATQLSPKQYLTQLRLQSSKQSL--NKLSVTDAAYEAGYDNISHYIRLFKNAYGL 272 Query: 304 TPGEDAARM 312 TP + + Sbjct: 273 TPKQYQRSL 281 >UniRef50_Q5WDQ8 AraC/XylS family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDQ8_BACSK Length = 272 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 7/153 (4%) Query: 155 SEEILCAAERLLDVMERPLDARIL-GKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 IL + L+ + P + L K + ++L +VL L L + + ++ Sbjct: 118 EPSILQMVDELIQIDAEPGEMAALQKKALFYQLLAHVLR------LARLQQKPKNSEVME 171 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 ++ I Y E +++ QLAA +M+ F F+ T P+ Y+ + R+ +A +++ Sbjct: 172 ETIRYIHAHYHEPITLGQLAARYDMTPKYFSAAFRKCTGVGPIDYVIHCRMKRAHQLLMT 231 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 SA A VGY+ FSR FK+ FGV P Sbjct: 232 GAFTVSAVARSVGYQDPYYFSRLFKKQFGVAPS 264 >UniRef50_A4XJL7 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJL7_CALS8 Length = 291 Score = 139 bits (352), Expect = 8e-32, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 55/106 (51%) Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 R + S I ++++ I+N Y E+++++ LA +S + + FK + +YL N RL Sbjct: 172 RISSLSSIEKIIEYIKNHYMEDITLDDLAKMVYLSPTYLSYLFKKQLGITFKEYLINIRL 231 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K++ +I + + VG E + FSR FK+ FGV+P Sbjct: 232 KKSKELIETTDLSIGEISKMVGIEDQNYFSRLFKKKFGVSPLNYKK 277 >UniRef50_C5D8H7 Two component transcriptional regulator, AraC family n=3 Tax=Geobacillus RepID=C5D8H7_GEOSW Length = 515 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 47/113 (41%) Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + Q I + I+ Y L++E++A +S F FK + + Y+ Sbjct: 399 IQAWRHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGISPYYFSKLFKDRFGMTFIDYV 458 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 R+ +A+ + VGY + FSR FK++ G++P E ++ Sbjct: 459 TEVRIARAKKEMADPNKSLKEICFLVGYNDPNYFSRVFKKHTGMSPTEYRKKL 511 Score = 43.2 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 11/71 (15%) Query: 258 YLKNYR-------LHKARMMI---IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 Y++ +R + KA+ I H + A VG S FS+ FK FG+T + Sbjct: 398 YIQAWRHQQANGKIGKAKDYIDEHYHHPLTLEEVAEYVGI-SPYYFSKLFKDRFGMTFID 456 Query: 308 DAARMRAMQGN 318 +R + Sbjct: 457 YVTEVRIARAK 467 >UniRef50_A8LUG5 Transcriptional regulator, AraC family n=8 Tax=Bacteria RepID=A8LUG5_DINSH Length = 295 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 11/231 (4%) Query: 87 FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELL-MDIGEDEHFQPSMA 145 F + +E ++ + +ATS+ + + +D + ++G Q Sbjct: 73 FTFHKHEIVVTPAGMRSGWRWFATSD----VIVVTLDPEMVGRFAQSELGLLLDPQQFRD 128 Query: 146 ASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALL-ALV 203 + ++ A L D + + L + ++ + + R +L +L + A + Sbjct: 129 LPLFS----DPDLCAAGVMLRDALEDDSLTSGVMFEALSRVLLVKLLQRYGQRRVEDADL 184 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S + +RVL I ++VE L+ EA MS S F FK T+P+QY+ YR Sbjct: 185 SARFTAQHYNRVLTHIRAHLDRTITVEHLSREAGMSPSHFSRVFKETLGTTPMQYVMAYR 244 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 + +A M+ A+ G+ + FSR FK+ G TP A + A Sbjct: 245 IEQAMKMMADPLRPLGDIALACGFADQAHFSRSFKQVTGRTPRAHRAALSA 295 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 139 bits (352), Expect = 9e-32, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 1/156 (0%) Query: 155 SEEILCAAERLLDVMERPLD-ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 +E+I+ RL ++ + +L + + E+ +Y+ L+ + + I Sbjct: 140 NEQIVSLLMRLEELYREKAEGYELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIMQIK 199 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 L I + Y ENL+++ ++ N+S S+ FK + +P YL +YR+ ++ ++ Sbjct: 200 AALDYIHDNYKENLTLDDISEACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPYLLS 259 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +GM + AA+ VG+ S+S +S FK+Y TP E Sbjct: 260 EGMNITEAALSVGFSSSSYYSEIFKKYMKCTPTEYK 295 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 17/231 (7%) Query: 83 NERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 ++R + A + L++ C A + P + L D L+ + L G + QP Sbjct: 59 DQREYHLTAGQGFLISPD--AICSYEADEKDPWTYIWLEFDGLKTEHFLRQAGLSKE-QP 115 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + + S + +++L + + A +LG Y+ L Sbjct: 116 IFSQREM---PTSSPVYHEMKQILALHHQ-KSALVLG-------HLYLFISCLIDCSLTK 164 Query: 203 VSRQTHFSL---ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 S + + I + +E Y + +SV+ LA N++ F FK + SP Q++ Sbjct: 165 TSSKHDENKEFYIREAINFVERNYEKAISVDDLAQVCNLNRHYFSRLFKEQMNISPQQFI 224 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 YRL +A ++ + A +GY + FS FKR++ ++P Sbjct: 225 IQYRLSEACELLKNTTKTLQEIAEEIGYSNQFNFSTAFKRHYQISPNRWRK 275 >UniRef50_UPI00017894C2 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017894C2 Length = 310 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 7/191 (3%) Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 D+ L+ L + + + + + +++L ER + L A++L Sbjct: 123 FDVAFLEYFLRKEMNAQSQITLDSVTDVTVRNVLKDMLIEYERRTPFFQISLKAKLLV-- 180 Query: 182 IIREILYYVLTGPCGGALL-ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 +L + G L + + +++RV+ I N Y E++++ L + +N+S Sbjct: 181 ----LLSILARQVNGELLREGFEKSEKYREIMTRVVDHIHNHYQEDMNLNDLCSLSNLSR 236 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 S F FK T + +YL + R+ +A MM+ + + G+ S F R FK+Y Sbjct: 237 STFCILFKEWTGKTFNRYLTDLRILQAMMMLKQPELSVTDVCYSTGFNELSYFCRIFKKY 296 Query: 301 FGVTPGEDAAR 311 G++P + + Sbjct: 297 TGISPTDFRKQ 307 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%) Query: 186 ILYYVLTGPCGGALLALVS-----RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 ILY + T + L R + I++V IE + E + + +AA NMS Sbjct: 150 ILYDLSTADRHILVSNLYDTKDTIRTSKSRRIAKVCDYIEKNFEEPIKLGDVAALVNMSE 209 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 SAF H F+ T+ + + Y+ N R+ +A M+ + G+ + S F R FK+ Sbjct: 210 SAFSHFFRKKTNCTFIDYINNLRVARACQMLTETSHTVAEICYSCGFNNLSNFIRIFKKK 269 Query: 301 FGVTPGEDAARMRAM 315 G TP E ++ M Sbjct: 270 KGNTPSEYRTILQQM 284 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 47/247 (19%), Positives = 95/247 (38%), Gaps = 18/247 (7%) Query: 73 LFSGHKIGYINE-----RVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQ 126 + SG + + + + + L+ P + T A ++P + + D L+ Sbjct: 46 VLSGTGTLMADNAKGITQTYNIKSGQGFLI---FPGQINTYIADDKLPWEYIWIEFDGLR 102 Query: 127 LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREI 186 ++E L + +S + E+++ + P ++ + Sbjct: 103 VKEALTTT----ELTKNNPVYHTHSKDIREKLVEEMLYITR---HPSESPYHLIGHMYLF 155 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 L Y++ L + + I + IE + ++S+E +A ++ S Sbjct: 156 LDYLMQSAKSSKL--VPGGKMSDFYIKEAMNYIEQNFQNDISIEDIAGVCGINRSYLGKI 213 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK+ SP ++L NYR+ KA ++ + + VGYE+ FSR FK +GV P Sbjct: 214 FKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYENQLHFSRAFKNIYGVAPR 273 Query: 307 EDAARMR 313 E + Sbjct: 274 EWRNEHK 280 >UniRef50_C6JCU7 Transcriptional regulator n=3 Tax=Ruminococcus RepID=C6JCU7_9FIRM Length = 282 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 53/101 (52%) Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 + +VL+ IE Y +++++L+A +MS F F +T +P+ YL R+ +A + Sbjct: 182 QLKQVLEFIEKNYANPITLQELSASVSMSPKYFCRFFSEMTHQTPVDYLNRQRIEEACLQ 241 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + + A R G+ S F R FK+Y G+TPG+ R Sbjct: 242 LAATDDSITEIAYRNGFNDLSYFIRTFKKYKGMTPGKYKRR 282 >UniRef50_A4CDX9 AraC-type DNA-binding domain-containing protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDX9_9GAMM Length = 304 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 50/253 (19%), Positives = 104/253 (41%), Gaps = 17/253 (6%) Query: 67 EPGIIILFSGHKIGYIN--ERVFRYDANEYLL------LTVPLPFECETYATSEVPLAGL 118 + + + SG K+ + ++ R+ + + + + P A+ + P + L Sbjct: 57 QLMLCAMSSGEKVMHHTSFDQGQRFVPGQSFMIAAGEEVAIDFP-----TASWQAPTSCL 111 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARI 177 + +D ++Q+++ + ++ PS++A ++ +RL V E P D + Sbjct: 112 TIEIDSKKIQQVVERLALEQP--PSLSAQATLQLDNTQATQALYQRLTQVCYEEPDDRGL 169 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 L I E++ + L V R + + L ++ + + +E++ A Sbjct: 170 LLDLGISELIVRLFRVKARAMFLQHVQRDPELTPLHAALAYMQRNLHQQIEIEEVCKVAC 229 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 + S + FK +++P +L RL A I H G + A G+ S FSR F Sbjct: 230 VGRSRLYGLFKKHLNSTPQAFLLEQRLSFAADKIKH-GANITRACYDSGFVDPSHFSRRF 288 Query: 298 KRYFGVTPGEDAA 310 K FG++P + Sbjct: 289 KSMFGLSPKQFQQ 301 >UniRef50_C1F8R2 Transcriptional regulator, AraC family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8R2_ACIC5 Length = 327 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 14/162 (8%) Query: 162 AERLLDVMERP-----LDARILGKQIIREIL-YYVLTGPCG--GALLALVSRQTHFSLIS 213 ER++ V+ P L L + ++ E+L +V G G L AL RQ + Sbjct: 161 VERMMKVVREPRPGSVLMGEYLAQMMLVEVLQLHVANSASGAVGWLFALADRQ-----VR 215 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 + + + +V++LA +A MS SAF FK + YL +R+ A ++H Sbjct: 216 AAIAAMHRAPAQRWTVQELAEQAGMSRSAFAQRFKERVGLPAMSYLTRWRMMLAADQLMH 275 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 + A +GYES S F FKR G +P + R RA+ Sbjct: 276 SKDSVAEIAFSLGYESESAFGFAFKREMGCSPRQY-GRNRAL 316 >UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Oceanospirillales RepID=A6VU91_MARMS Length = 298 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 108/253 (42%), Gaps = 14/253 (5%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP--FECETYATSEVPLAGLRLNVD 123 YE I+ SG ++ + + Y + +L LP + C+ EV L + + D Sbjct: 41 YELHFIVATSGK--VFVGDYIGNYSPGQLILTGPRLPHNWICQ-KDQEEVQLRDMVIRFD 97 Query: 124 ILQLQELLMDIGEDEHFQP--SMAASGINSATLSEE-ILCAAERLLDV--MERPLDARIL 178 + I E P + A SGI E + +++ D + R + A L Sbjct: 98 HESFSNGMKIIPELAEILPMLARAKSGIEFYDQDHEYLKDVFQKVRDSTGLSRLILALPL 157 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 +++ + Y +L+ + L S +T I+ V+ + Y++++++ +A+ M Sbjct: 158 LQKLAQSRSYRLLSTVQ----IDLKSSETLQRKINTVVDYVSQNYSQDITLSSVASLIGM 213 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 S S F FK T ++++ R+ +A ++ + + +VG+ + + F+R F Sbjct: 214 SDSHFSRFFKKATGNRFIEFVNRVRVSRACSLLTETDQQIATICFQVGFNNVANFNRRFH 273 Query: 299 RYFGVTPGEDAAR 311 GVTP + + Sbjct: 274 ELKGVTPRDFRTQ 286 >UniRef50_C6LLK3 Putative two-component response regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LLK3_9FIRM Length = 531 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 54/109 (49%) Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + SL+ + ++ Y+ +S++ ++ E N+S F FK + + +YL N R Sbjct: 421 NEDRSESLVEKARSYMQENYSREISLDDVSKEVNVSPYYFSKIFKEESGENFTEYLTNIR 480 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 + KA+ ++ + + + GY + FSR FK++ G+TP E R Sbjct: 481 IGKAKELLENPELSIKEIGVMSGYTDPNYFSRIFKKHTGITPREYRERY 529 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 54/110 (49%) Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 A + + R+L+ +E Y E ++VE A S S F FK +QYL Sbjct: 224 AAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELCFYSNSHFMKYFKQYMGVPFIQYLN 283 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 +RL KA M++ +A A R G+++ S F+R F+R +G TPGE Sbjct: 284 EFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRLFRRKYGKTPGEYRK 333 >UniRef50_B0ABU8 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABU8_9CLOT Length = 412 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 49/100 (49%) Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 LI + + I Y E++++E +A +++ S F FK S YL R+ +++++ Sbjct: 311 LIQKCISYINEHYNEDINLETIANIVHLNPSYFSSIFKKEVGVSFSNYLNKIRIEQSKLL 370 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 + + A+ VG+E S FS+ FK +TP + Sbjct: 371 LKNTDSSIVEIALEVGFEDQSYFSKVFKNLTKMTPKQYRQ 410 >UniRef50_UPI00017895AE two component transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI00017895AE Length = 353 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 111/310 (35%), Gaps = 59/310 (19%) Query: 49 DVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY 108 + + I+ SGH + RY +++LL + + + Sbjct: 63 GLEFIRRVRESHAQMHF------IILSGHDNFEFARQAMRYGVSDFLLKPID---PAQFH 113 Query: 109 ATSEVPLA---------------GLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSAT 153 AT E L +L ELL E E + + + Sbjct: 114 ATLERACRELDERKARFSRQTKWTLAQQRHKARLAELLWSAEEREALEQTHEIMALFETM 173 Query: 154 LSEEIL------CAAERLLDVM------------------ERPLDARILGKQIIREILYY 189 +E+ LL + + PL R + ++E+L Sbjct: 174 GPKEVSLSRYAHMLISELLSALEERGLMLNMDTGEEQWAQDDPLACRRQTEDKVKEML-- 231 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYT-ENLSVEQLAAEANMSVSAFHHNFK 248 AL+ I + + IE Y E+LS++++A MSV+ FK Sbjct: 232 --------ALIKGSRNLGSRHNIQKAKRFIEENYAMEDLSLQEVADSVGMSVTYLSRTFK 283 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 S T+ + ++YL R+ KAR ++ + A AA RVG+ FS+ FK++ G+TP Sbjct: 284 SETNMNFVKYLVQVRMEKARELLAESELSAQEAAYRVGFSDYVHFSKTFKKFHGLTPSAY 343 Query: 309 AARMRAMQGN 318 + +AM G Sbjct: 344 RKQCKAMNGG 353 >UniRef50_C6D7E7 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D7E7_PAESJ Length = 281 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 97/251 (38%), Gaps = 16/251 (6%) Query: 66 YEPG---IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 Y P ++ G I+ + +R + + + A S+ P + + Sbjct: 38 YIPSYNKFYLICEGEGWLNIDGQDYRPVPGQLVHMPAH--VLQSYSAVSDRPYSKYWCHF 95 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATL-SEEILCAAERLLDVME-RPLDARILGK 180 +GE + FQ ++ + ++ + L+++ + R ARI K Sbjct: 96 --------TATMGEMDLFQWLEIPPILDISPDHTDSLTKLFRELVELYQNRSYLARIREK 147 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 I+ EI+ + L + R + ++ IE +E L++EQLA ++ Sbjct: 148 AILLEIIA-LFLSHSDTHLKFVPGRLGEIERLKQIEAFIEANLSEALTLEQLAKHVHLHP 206 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 + F + PL+YL R+ KA+ ++ + A VG+ + F++ F++ Sbjct: 207 NYLVRYFNKHFAVPPLKYLNRKRMQKAKSLLGTTDLAIKEIAELVGFPDTNHFAKAFRKE 266 Query: 301 FGVTPGEDAAR 311 +P E R Sbjct: 267 ASCSPTEYRHR 277 >UniRef50_C7H4U6 Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4U6_9FIRM Length = 332 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 68/155 (43%) Query: 158 ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLK 217 + C E V P D + + L + T GG Q + ++L+ Sbjct: 177 LACLREAWQAVAVEPFDYENRVRYYLSAALRLLSTQCVGGKTKVSQQEQIAAERMKQMLR 236 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 +E Y E L+VE++AA +S SA +F+ + +P+QY+K +R+ KA ++ +K Sbjct: 237 FVEEHYAEELTVERIAASVALSESACLRSFRQMLGITPIQYVKQFRVEKAAELLRSTRLK 296 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 M G+ S F + F+ TP E A+ Sbjct: 297 TGEIGMECGFADGSYFIKTFREIKHCTPKEYRAKF 331 >UniRef50_Q21KB5 Transcriptional regulator, AraC family with amidase-like domain n=2 Tax=Alteromonadales RepID=Q21KB5_SACD2 Length = 330 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 65/156 (41%) Query: 159 LCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKR 218 + A L + + ++ + + R + + G L I + Sbjct: 170 VNALADLTVLFIQRYYSKHVASHVERHFFHEIRQAYQSGTSLLEQENSHPDEEIIQTQIW 229 Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 + + + + + + +A +MS F FKS T +PL YL+N R+ A+ ++ + Sbjct: 230 LRDNFAKEIKLNDVAQLFSMSPRTFTRRFKSATGRTPLHYLQNIRIDVAKDLLQTSNLSV 289 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 S RVGY + F+ FK+ GVTP + +RA Sbjct: 290 SEIMFRVGYHDPTHFTNLFKKSLGVTPSQYRTTVRA 325 >UniRef50_C1I3A1 Response regulator receiver protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3A1_9CLOT Length = 249 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 59/110 (53%) Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 +V + + I + LK I++ Y +++S+ +A +S F FK + YL Sbjct: 139 HNIVKPKAYSRSIEKALKYIDDNYKKHISLMDVAKHIYLSHEYFSRLFKEEVGENFSTYL 198 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 YR+ KA+ +I + MK S A+ VGY +A FS+ +KRY G++P ED Sbjct: 199 TIYRIKKAKELIKNTDMKISQIALEVGYSNAGYFSKNYKRYTGISPEEDR 248 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 49/264 (18%), Positives = 99/264 (37%), Gaps = 17/264 (6%) Query: 59 FARTPVMYEPGIII---LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPL 115 R P +Y+ + + G + + A + L+ + ++ P Sbjct: 34 HQRGPKVYD--FYLMHTVLEGKGEFTCGGKSYPLQAGDTFLIEPE--ALVSYISNADEPW 89 Query: 116 AGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDA 175 + + Q EL G A+ + + + + + A Sbjct: 90 LYRWVAFNGPQAAELAQAAG-------FSVANPVAETAAIRRVGVLYNHIFSIFRKNDPA 142 Query: 176 RIL-GKQIIREILYYVLT-GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLA 233 L ++ +L T A+ + LI +++ + +Y + +S+EQ+A Sbjct: 143 AHLKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLSTQYAQPVSIEQMA 202 Query: 234 AEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH-DGMKASAAAMRVGYESASQ 292 + + FK T SP+ +L R+ KAR MI +G+ A VG + + Sbjct: 203 ESFGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQIAASVGLQDSLY 262 Query: 293 FSREFKRYFGVTPGEDAARMRAMQ 316 FS++F+R++G++P MR M+ Sbjct: 263 FSKQFRRFYGLSPSAYRESMRQMK 286 >UniRef50_UPI000178AA55 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178AA55 Length = 275 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 46/243 (18%), Positives = 95/243 (39%), Gaps = 19/243 (7%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT--SEVPLAGLRLNVDILQL 127 + + G I + + +L +P + S P + Sbjct: 46 LYFILDGEGWVKIGDEELYPVPGQLVL----MPARTRQSYSVISGRPYLKYWSHFS---- 97 Query: 128 QELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREI 186 +G+ + F + + + E+ ++L+D L AR+ K ++ +I Sbjct: 98 ----ATVGDSDVFSWLNVPHCYDLSG-NAEMPALFQQLVDAHRSDTLAARLREKSVMLDI 152 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 L V + A + + +V + I+N E +++EQ+A ++ + F Sbjct: 153 LSRVF-EHQQPQIHA--DKMEDMGRLHKVQQYIKNHLHEEITLEQMAGTLHLHPNYFIKY 209 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK +P +YL R+ +A++M+ + A G+ESA+ FS+ F++ G +P Sbjct: 210 FKRHFGITPQKYLSLKRMEQAKLMLRTTSLSIKEIADATGFESANYFSKTFRKEVGYSPS 269 Query: 307 EDA 309 E Sbjct: 270 EYR 272 >UniRef50_UPI0001C36195 two component transcriptional regulator, AraC family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36195 Length = 145 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 57/111 (51%) Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 LL V + +I + + IE Y ++L+V LA + ++VS FK T + Sbjct: 12 RLLDGVRNKESADVIISIREYIEKNYDDSLNVADLARKYGLNVSYLSTLFKERTGINITS 71 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 Y++ R+ KA ++ K + A VGY ++ FSR FK+Y GVTPGE Sbjct: 72 YIEGIRMEKAMNLLRETNWKVTEVAFHVGYSNSGYFSRVFKKYTGVTPGEY 122 >UniRef50_A3YD69 Putative transcriptional regulator (AraC/XylS family protein) n=1 Tax=Marinomonas sp. MED121 RepID=A3YD69_9GAMM Length = 368 Score = 138 bits (348), Expect = 2e-31, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 101/253 (39%), Gaps = 18/253 (7%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLT------VPLPFECETYATSEVPLAGLRLNVD 123 + + +G K+ + ++ F + + +++ + P A + P L +N+ Sbjct: 115 LCGMLTGKKVVHCDDVAFDFLPQQSFVMSPNQHIDIDFP-----LAKEQAPTTCLTINLS 169 Query: 124 ILQLQELLMDI-----GEDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARI 177 ++Q++ + E + S LS+ ERL+ + E + + Sbjct: 170 QARIQQISDQLNFKNKPMMEIGEWRYRDSDHLHMDLSQPTQSLLERLVALYSENSDERDL 229 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 + + I E+ +L LL + + + + L+ IEN L EQL A Sbjct: 230 MIELGISELTVRMLQQQARNFLLKQLDYDPELTGLHKALQHIENYLDLPLDTEQLQKLAC 289 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 MS S F FK +P +Y R+ + + GM + A++ G+++ S FSR F Sbjct: 290 MSRSKFFQRFKQQLGCTPGEYQMQRRIEVSANKLKQ-GMSVTQASIESGFQNVSHFSRRF 348 Query: 298 KRYFGVTPGEDAA 310 +G +P E Sbjct: 349 YLRYGKSPTEFKR 361 >UniRef50_B0UI49 Transcriptional regulator, AraC family n=3 Tax=Rhizobiales RepID=B0UI49_METS4 Length = 353 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 10/215 (4%) Query: 112 EVPL-AGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 E PL L + + E ++ + + + I E+I A R ++ Sbjct: 129 EQPLHDCLHIFLPPDPFAECVLQDLNIDPARAGLRYEAIAYDPFIEQIAFAINR--ELQA 186 Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALV----SRQTHFSLISRVLKRIENKYTEN 226 R+L + + R + Y++ + A+ ++ +SRVL+ I + +N Sbjct: 187 ETSAGRLLVESLARSLSAYLVNRYSELSTRAIGFSSEAKPIDSRRMSRVLEFIGARLDQN 246 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +V +L++ A MS + F FK+ T +P ++ RL A+ M+ A+ G Sbjct: 247 FTVAELSSVACMSQAHFARAFKATTGHAPHAFVSRMRLESAKRMLADGLRPIGEIALAAG 306 Query: 287 YESASQFSREFKRYFGVTPGEDA---ARMRAMQGN 318 + S S FSR F+ G+ PG+ AR RA G+ Sbjct: 307 FSSQSNFSRAFRSAVGLPPGDYRRSQARSRAASGD 341 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 58/106 (54%) Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 + V++ I++ Y+ + + +LAA MS F FKS+T +P+ Y+ +YR+ +A Sbjct: 192 IDRLKTVIQHIQHNYSHPIRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAA 251 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 ++ K S A+ VG+++ S F R F++ +P E R++A Sbjct: 252 ELLREPERKISDIALEVGFDNISYFIRVFRKAMNCSPSEFRKRLQA 297 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 90/242 (37%), Gaps = 8/242 (3%) Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG 135 GH +N + +++++ + + L G+++ D+ L Sbjct: 42 GHCTIKVNGESYDCQPGDFVII-HTMEDHTLIRNSDCK-LLGVQM--DLSVLDTAFSPFY 97 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG-KQIIREILYYVLTGP 194 E ++ P + SG + E +L + + G + I+ + + + Sbjct: 98 ESQYLVPFIRGSGKYQRRIRVPKGSLLESILSEILVEYQKKQPGYEMYIKGDILRLFSCL 157 Query: 195 CGGALLALVSRQTHFS---LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 ++ + R +F I V+ +E LSV A A MS F FK V Sbjct: 158 VRTKVIEIGERNVNFQDLERIKPVIDYMEQHIETELSVAAAAKIACMSYYHFCRLFKKVI 217 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + ++Y R+ +A ++I + A G+ S + F+R FK+ G P + Sbjct: 218 GKTFVEYQNFIRIRRAEKLLITTDRTITNIAFETGFGSVAYFNRVFKKETGQAPANYRKK 277 Query: 312 MR 313 MR Sbjct: 278 MR 279 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulat... 371 e-101 UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=... 326 6e-88 UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=... 316 5e-85 UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=P... 316 9e-85 UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=P... 314 3e-84 UniRef50_B3E2X9 Transcriptional regulator, AraC family n=7 Tax=B... 312 7e-84 UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=P... 312 1e-83 UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=... 312 1e-83 UniRef50_Q3A5M5 Transcriptional regulator, AraC family n=4 Tax=D... 311 3e-83 UniRef50_Q1H3T0 Transcriptional regulator, AraC family n=27 Tax=... 310 4e-83 UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteoba... 309 1e-82 UniRef50_Q7CW43 Transcriptional regulator, AraC family n=7 Tax=P... 304 2e-81 UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] bra... 303 4e-81 UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria... 303 6e-81 UniRef50_D2C3B7 Transcriptional regulator, AraC family n=2 Tax=E... 301 2e-80 UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=V... 300 3e-80 UniRef50_B4X416 AraC-type transcriptional regulator N-terminus d... 300 5e-80 UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein ... 300 5e-80 UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=D... 299 1e-79 UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter fo... 298 2e-79 UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=B... 298 2e-79 UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein ... 297 4e-79 UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria... 297 5e-79 UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=G... 296 6e-79 UniRef50_Q1QZB6 Transcriptional regulator, AraC family n=10 Tax=... 295 9e-79 UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=A... 295 2e-78 UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n... 294 3e-78 UniRef50_C4XTV7 AraC family transcriptional regulator n=5 Tax=Ba... 294 4e-78 UniRef50_B2KD36 Transcriptional regulator, AraC family n=1 Tax=E... 293 7e-78 UniRef50_C9Y4C2 Uncharacterized HTH-type transcriptional regulat... 292 2e-77 UniRef50_C6D8S3 Transcriptional regulator, AraC family n=1 Tax=P... 291 2e-77 UniRef50_B9Z2E6 Transcriptional regulator, AraC family n=1 Tax=L... 291 2e-77 UniRef50_Q396P4 Transcriptional regulator, AraC family n=1 Tax=B... 291 2e-77 UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=P... 290 3e-77 UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n... 290 5e-77 UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Prote... 290 5e-77 UniRef50_B1X2S3 Transcriptional Regulator, AraC family n=3 Tax=C... 290 6e-77 UniRef50_A9IS89 Transcriptional regulator, AraC family n=13 Tax=... 289 7e-77 UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=C... 289 1e-76 UniRef50_A9I0Y6 Transcriptional regulator, AraC family n=72 Tax=... 288 2e-76 UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=A... 287 3e-76 UniRef50_A9WCQ6 AraC-type transcriptional regulator domain prote... 287 4e-76 UniRef50_C6D3S9 Transcriptional regulator, AraC family n=1 Tax=P... 287 5e-76 UniRef50_A9HQ74 Putative transcriptional regulator, AraC family ... 286 6e-76 UniRef50_A6M087 AraC-type transcriptional regulator domain prote... 286 7e-76 UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=P... 286 8e-76 UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus d... 286 9e-76 UniRef50_A8APL9 Putative uncharacterized protein n=1 Tax=Citroba... 285 1e-75 UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=P... 285 1e-75 UniRef50_C3KMN9 Transcriptional regulator, AraC family n=1 Tax=R... 285 1e-75 UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n... 285 2e-75 UniRef50_Q4ZQJ7 Helix-turn-helix, AraC type:AraC-type transcript... 284 2e-75 UniRef50_B0KFF0 Transcriptional regulator, AraC family n=8 Tax=P... 284 3e-75 UniRef50_A6W3U9 AraC-type transcriptional regulator domain prote... 284 3e-75 UniRef50_C3MHY3 Putative transcriptional regulator, AraC family ... 284 3e-75 UniRef50_Q15PL3 Transcriptional regulator, AraC family n=3 Tax=A... 284 4e-75 UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=H... 283 6e-75 UniRef50_UPI0001744B11 AraC-type transcriptional regulator domai... 283 7e-75 UniRef50_Q1QSH7 Transcriptional regulator, AraC family n=2 Tax=G... 282 9e-75 UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=T... 282 1e-74 UniRef50_C8SHN4 Transcriptional regulator, AraC family n=2 Tax=M... 282 1e-74 UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein ... 282 1e-74 UniRef50_A6UG08 AraC-type transcriptional regulator domain prote... 282 1e-74 UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n... 281 2e-74 UniRef50_Q30WL5 Transcriptional regulator, AraC family n=1 Tax=D... 281 3e-74 UniRef50_A6W3U1 AraC-type transcriptional regulator domain prote... 281 3e-74 UniRef50_C0N265 AraC-type transcriptional regulator N-terminus d... 280 4e-74 UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=S... 280 5e-74 UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteo... 279 8e-74 UniRef50_Q5E474 Predicted DNA-binding transcriptional regulator ... 278 2e-73 UniRef50_D2L3Y8 Transcriptional regulator, AraC family n=1 Tax=D... 277 5e-73 UniRef50_Q021U2 Transcriptional regulator, AraC family n=1 Tax=C... 276 7e-73 UniRef50_B1K2F3 Transcriptional regulator, AraC family n=7 Tax=P... 276 8e-73 UniRef50_B0SVQ8 Transcriptional regulator, AraC family n=8 Tax=c... 275 1e-72 UniRef50_C9P783 AraC-type DNA-binding domain-containing protein ... 275 2e-72 UniRef50_Q089X8 Transcriptional regulator, AraC family n=4 Tax=P... 274 3e-72 UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Gr... 274 3e-72 UniRef50_Q88K66 Transcriptional regulator, AraC family n=4 Tax=P... 274 3e-72 UniRef50_A6WBM1 AraC-type transcriptional regulator domain prote... 274 3e-72 UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=P... 274 4e-72 UniRef50_Q021L8 Transcriptional regulator, AraC family n=1 Tax=C... 274 4e-72 UniRef50_C9PHT7 Transcriptional regulator AraC family n=2 Tax=Ga... 273 7e-72 UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiom... 272 9e-72 UniRef50_A9GMF7 Transcriptional regulator, AraC family n=2 Tax=P... 272 1e-71 UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=D... 271 2e-71 UniRef50_A6FZ93 Transcriptional regulator, AraC family protein n... 271 3e-71 UniRef50_A3M8D5 Transcriptional regulator AraC family n=10 Tax=A... 270 5e-71 UniRef50_A3QEE9 Transcriptional regulator, AraC family n=1 Tax=S... 269 8e-71 UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=G... 269 9e-71 UniRef50_Q15TL4 Transcriptional regulator, AraC family n=1 Tax=P... 269 1e-70 UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfo... 268 2e-70 UniRef50_B8DSD0 Transcriptional regulator, AraC family n=1 Tax=D... 268 2e-70 UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens ... 267 3e-70 UniRef50_A3YHM2 Putative transcriptional regulator n=1 Tax=Marin... 267 3e-70 UniRef50_Q65QP8 AraC protein n=7 Tax=Pasteurellaceae RepID=Q65QP... 266 9e-70 UniRef50_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=P... 265 2e-69 UniRef50_Q0SK59 Transcriptional regulator, AraC family protein n... 265 2e-69 UniRef50_B4Y346 Putative AraC family transcriptional regulator n... 264 4e-69 UniRef50_C6ARF9 Transcriptional regulator, AraC family n=4 Tax=P... 263 5e-69 UniRef50_A0RQF6 Transcriptional regulator, AraC family n=1 Tax=C... 262 1e-68 UniRef50_Q1ZUN2 AraC-family trancriptional regulator n=2 Tax=Pho... 262 2e-68 UniRef50_Q1MYY9 AraC-family trancriptional regulator n=1 Tax=Ber... 260 4e-68 UniRef50_B1KC45 Transcriptional regulator, AraC family n=17 Tax=... 260 4e-68 UniRef50_Q2S734 AraC-type DNA-binding domain-containing protein ... 260 5e-68 UniRef50_B0T5I6 Transcriptional regulator, AraC family n=1 Tax=C... 259 9e-68 UniRef50_A9D252 Transcriptional regulator, AraC family protein n... 259 1e-67 UniRef50_Q65QM2 AraC protein n=1 Tax=Mannheimia succiniciproduce... 257 3e-67 UniRef50_B0C5B1 Transcriptional regulator, AraC family n=1 Tax=A... 256 6e-67 UniRef50_B5J4U5 Transcriptional regulator, AraC family protein n... 256 7e-67 UniRef50_B2IB97 Transcriptional regulator, AraC family n=5 Tax=R... 255 1e-66 UniRef50_A6LZC1 AraC-type transcriptional regulator domain prote... 255 1e-66 UniRef50_Q1J2Q3 Transcriptional regulator, AraC family n=1 Tax=D... 255 1e-66 UniRef50_B0S9N6 Transcription regulator n=2 Tax=Leptospira bifle... 254 2e-66 UniRef50_UPI000197C8CE AraC family transcription regulator n=1 T... 254 3e-66 UniRef50_Q1GMB4 Transcriptional regulator, AraC family n=3 Tax=R... 254 5e-66 UniRef50_C6ARF6 Transcriptional regulator, AraC family n=12 Tax=... 252 1e-65 UniRef50_A7HDG1 AraC-type transcriptional regulator domain prote... 252 1e-65 UniRef50_A4BKJ5 Probable transcriptional regulator n=1 Tax=Reine... 252 2e-65 UniRef50_B9JLS7 Transcriptional regulator protein n=1 Tax=Agroba... 250 6e-65 UniRef50_A7GXA4 Transcriptional regulator, AraC family n=2 Tax=C... 249 1e-64 UniRef50_A9HXN5 Transcriptional regulator, AraC family n=9 Tax=P... 249 1e-64 UniRef50_Q6FB96 Putative transcription regulator (AraC family) n... 247 5e-64 UniRef50_A9FZJ5 Transcriptional regulator, AraC family n=1 Tax=S... 246 9e-64 UniRef50_D0DBP1 AraC-type transcriptional regulator domain prote... 244 4e-63 UniRef50_C5CNC1 Transcriptional regulator, AraC family n=1 Tax=V... 241 2e-62 UniRef50_D0LTL2 Transcriptional regulator, AraC family n=1 Tax=H... 239 8e-62 UniRef50_Q82GC0 Putative AraC-family transcriptional regulator n... 239 9e-62 UniRef50_Q15RK2 Transcriptional regulator, AraC family n=8 Tax=P... 238 1e-61 UniRef50_C1TR85 Transcriptional regulator, AraC family n=1 Tax=D... 238 2e-61 UniRef50_A7JPV4 AraC family transcriptional regulator n=2 Tax=Ma... 237 5e-61 UniRef50_A9G5E9 Transcriptional regulator, AraC family n=1 Tax=S... 233 4e-60 UniRef50_A9AC46 AraC family transcriptional regulator n=1 Tax=Bu... 233 6e-60 UniRef50_B6R5M8 AraC-family trancriptional regulator n=1 Tax=Pse... 232 9e-60 UniRef50_C0A3K5 AraC family transcriptional regulator n=1 Tax=Op... 227 3e-58 UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=B... 225 2e-57 UniRef50_UPI00016AE94B transcriptional regulator, AraC family pr... 220 6e-56 UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 ... 218 2e-55 UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC ... 211 2e-53 UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein ... 210 7e-53 UniRef50_C7DDR7 Transcriptional regulator, AraC family n=2 Tax=R... 204 4e-51 UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 T... 203 5e-51 UniRef50_A5FFR2 Transcriptional regulator, AraC family n=3 Tax=B... 202 2e-50 UniRef50_C6VUN3 Transcriptional regulator, AraC family n=1 Tax=D... 200 8e-50 UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC ... 198 2e-49 UniRef50_A6ES38 AraC-type DNA-binding domain-containing protein ... 198 2e-49 UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Ox... 198 3e-49 UniRef50_D2QFH9 Transcriptional regulator, AraC family n=1 Tax=S... 198 3e-49 UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=C... 197 3e-49 UniRef50_Q3ADL3 Transcriptional regulator, AraC family n=1 Tax=C... 197 4e-49 UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecali... 196 7e-49 UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coproco... 196 1e-48 UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=R... 196 1e-48 UniRef50_A3HZK9 AraC-type DNA-binding domain-containing protein ... 196 1e-48 UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacte... 196 1e-48 UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dict... 195 1e-48 UniRef50_Q1QTE9 Transcriptional regulator, AraC family n=1 Tax=C... 195 1e-48 UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacteri... 195 2e-48 UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=C... 195 3e-48 UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=A... 193 7e-48 UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacte... 193 8e-48 UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronoba... 192 1e-47 UniRef50_A1B409 Transcriptional regulator, AraC family n=5 Tax=A... 191 2e-47 UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostri... 191 2e-47 UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacte... 191 3e-47 UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1... 191 4e-47 UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 ... 190 5e-47 UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=D... 190 5e-47 UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clos... 190 6e-47 UniRef50_C7PFA7 Transcriptional regulator, AraC family n=1 Tax=C... 190 8e-47 UniRef50_B9JPZ9 Transcriptional regulator (AraC/XylS family) n=1... 189 9e-47 UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes Re... 188 1e-46 UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=P... 188 2e-46 UniRef50_B9JQ27 Helix-turn-helix, AraC type n=1 Tax=Agrobacteriu... 188 2e-46 UniRef50_Q398W4 Transcriptional regulator, AraC family n=30 Tax=... 188 2e-46 UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 T... 188 2e-46 UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=C... 187 4e-46 UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1... 187 4e-46 UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus ... 187 5e-46 UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=C... 186 8e-46 UniRef50_UPI0001788255 transcriptional regulator, AraC family n=... 186 9e-46 UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=S... 186 9e-46 UniRef50_B1KR44 Transcriptional regulator, AraC family n=2 Tax=A... 186 1e-45 UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonel... 185 1e-45 UniRef50_C0YPK7 AraC-type DNA-binding domain-containing protein ... 185 1e-45 UniRef50_Q98D14 Transcriptional regulator (AraC/XylS family) n=2... 185 2e-45 UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=D... 185 2e-45 UniRef50_Q3ID67 Putative transcriptional regulator (AraC/XylS fa... 185 2e-45 UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptoco... 185 3e-45 UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostri... 185 3e-45 UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=C... 184 3e-45 UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligr... 184 4e-45 UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminoc... 184 4e-45 UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=... 183 5e-45 UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=D... 183 6e-45 UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=P... 183 7e-45 UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=C... 183 8e-45 UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eu... 183 1e-44 UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 T... 182 1e-44 UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bactero... 182 1e-44 UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella... 182 2e-44 UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC ... 181 2e-44 UniRef50_A3XKJ7 Transcriptional regulator n=1 Tax=Leeuwenhoekiel... 181 2e-44 UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=C... 181 2e-44 UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=... 181 3e-44 UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bactero... 181 3e-44 UniRef50_Q3JM08 Transcriptional regulator, AraC family n=53 Tax=... 181 3e-44 UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas Re... 181 3e-44 UniRef50_B1Y6T0 Transcriptional regulator, AraC family n=4 Tax=B... 180 4e-44 UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostri... 180 5e-44 UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacilla... 180 5e-44 UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=P... 180 6e-44 UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostri... 180 6e-44 UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides Re... 180 6e-44 UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=C... 180 7e-44 UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=... 180 7e-44 UniRef50_A6FIS9 Putative transcriptional regulator (AraC/XylS fa... 180 8e-44 UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=S... 179 1e-43 UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus ... 179 1e-43 UniRef50_Q2SKY5 AraC-type DNA-binding domain-containing protein ... 179 1e-43 UniRef50_Q0TTY3 Transcriptional regulator, AraC family n=8 Tax=C... 179 1e-43 UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryan... 179 1e-43 UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Rosebur... 179 1e-43 UniRef50_UPI0001744FFC activator protein MtlR n=1 Tax=Verrucomic... 178 2e-43 UniRef50_A3HVZ7 Transcriptional regulator n=1 Tax=Algoriphagus s... 178 2e-43 UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostri... 178 2e-43 UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostri... 178 2e-43 UniRef50_A4BBA6 Transcriptional regulator, AraC family protein n... 178 2e-43 UniRef50_B2IHG7 Transcriptional regulator, AraC family n=1 Tax=B... 178 2e-43 UniRef50_C9PJ43 Transcriptional regulator AraC family n=1 Tax=Vi... 178 3e-43 UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostri... 178 3e-43 UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=A... 177 3e-43 UniRef50_UPI00017450D3 transcriptional regulator, AraC family pr... 177 3e-43 UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostri... 177 3e-43 UniRef50_C7PHM8 Transcriptional regulator, AraC family n=1 Tax=C... 177 4e-43 UniRef50_A6W0F8 Helix-turn-helix-domain containing protein AraC ... 177 4e-43 UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptoc... 176 7e-43 UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=B... 176 8e-43 UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=V... 176 9e-43 UniRef50_Q2S2I5 Transcriptional regulator, putative n=1 Tax=Sali... 176 1e-42 UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Pa... 176 1e-42 Sequences not found previously or not previously below threshold: UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=C... 183 7e-45 UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coproco... 181 2e-44 UniRef50_C7PTR1 Transcriptional regulator, AraC family n=1 Tax=C... 181 3e-44 UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostri... 181 3e-44 UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacterial... 179 9e-44 UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales ... 179 9e-44 UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=C... 179 1e-43 UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=C... 178 3e-43 UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria Re... 176 1e-42 UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales ... 175 1e-42 >UniRef50_Q46855 Uncharacterized HTH-type transcriptional regulator yqhC n=112 Tax=Bacteria RepID=YQHC_ECOLI Length = 318 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 318/318 (100%), Positives = 318/318 (100%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA Sbjct: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL Sbjct: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 Query: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK Sbjct: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV Sbjct: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY Sbjct: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 Query: 301 FGVTPGEDAARMRAMQGN 318 FGVTPGEDAARMRAMQGN Sbjct: 301 FGVTPGEDAARMRAMQGN 318 >UniRef50_A4THW4 Transcriptional regulator, AraC family n=17 Tax=Gammaproteobacteria RepID=A4THW4_YERPP Length = 297 Score = 326 bits (836), Expect = 6e-88, Method: Composition-based stats. Identities = 176/290 (60%), Positives = 225/290 (77%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 +I +ADK+ +L + + V++LY RTPVMY P ++I+F GHK+GY+ Sbjct: 6 DIQAQMADKIARLAQGDGLTPSTVSGVKILYSTVHQPRTPVMYTPSVVIIFQGHKVGYLG 65 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 +VF+YD YL+L+VPLPFECET+A+ E+PLAG+ + VD LQ+L+M +G+DE +P Sbjct: 66 SKVFQYDPKNYLILSVPLPFECETFASPEIPLAGISIQVDSQMLQDLMMTMGDDELEKPP 125 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 SG+NSA L+EE+LCA ERLLDVM DAR+LG QI+REILYYVL G CGGAL ALV Sbjct: 126 GNTSGVNSAPLTEEMLCATERLLDVMSIARDARVLGPQIVREILYYVLCGSCGGALQALV 185 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 +R HF+ I++ L+RIEN + +NLSVEQLAAE NMSVSAFHHNFK+VT+TSPLQYLK+YR Sbjct: 186 NRHGHFNQITKTLRRIENHFADNLSVEQLAAEVNMSVSAFHHNFKAVTNTSPLQYLKSYR 245 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LH+ARMM++HDG+KAS AA++VGYESASQFSREFKRYFG TP E A+ R Sbjct: 246 LHRARMMMLHDGLKASTAAIKVGYESASQFSREFKRYFGHTPSEGVAKQR 295 >UniRef50_A4XVM8 Transcriptional regulator, AraC family n=15 Tax=Proteobacteria RepID=A4XVM8_PSEMY Length = 315 Score = 316 bits (811), Expect = 5e-85, Method: Composition-based stats. Identities = 98/308 (31%), Positives = 153/308 (49%), Gaps = 2/308 (0%) Query: 12 IIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGII 71 + D E+ +A V + + +P ++L +P +Y+P + Sbjct: 5 LATAATLDTPLAELSHEMARLVERFVPDDGLHLTAIPGLKLARATSPSLPMQTVYDPCLC 64 Query: 72 ILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQEL 130 I+ G K + + ++ YD YL+ +V LP A+ E P L L +D + L Sbjct: 65 IIAQGRKEIRLGDELYVYDPLNYLVASVMLPVTGRVIEASPEAPYLSLALEIDPALISSL 124 Query: 131 LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 L ++ + + + L +L A RLL ++E P D +L +REI Y + Sbjct: 125 LTEMPPI-PAPDAASQRALFLDRLDPRLLDAVIRLLRLLETPRDIAMLAPLALREIFYRM 183 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L P G L +V + ISR ++ + + + L +E+LA E N+S S HH FK+V Sbjct: 184 LLSPQGHRLHEVVVADSQSQRISRAIEWLRKNFDQPLRIEELAREVNLSPSTLHHRFKAV 243 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T+ SPLQY K RL +AR +++ D ++A+AA+ RVGYES SQFSRE+ R FG P D A Sbjct: 244 TAFSPLQYQKQLRLQEARRLMLCDNLEAAAASYRVGYESPSQFSREYSRLFGAPPQRDIA 303 Query: 311 RMRAMQGN 318 R+R N Sbjct: 304 RLRQAAQN 311 >UniRef50_D0KFC4 Transcriptional regulator, AraC family n=2 Tax=Pectobacterium RepID=D0KFC4_PECWW Length = 346 Score = 316 bits (809), Expect = 9e-85, Method: Composition-based stats. Identities = 171/313 (54%), Positives = 229/313 (73%), Gaps = 5/313 (1%) Query: 7 QSNC-RIIPKKLRDMKREE---ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART 62 +S C R++ K++ + E+ + + + + K L+P VR+LY E R Sbjct: 26 ESQCERLVQKQIIQKQTEQQQAARQRIVQQAIRCSTKSWVTPSLVPQVRILYTEQHHPRV 85 Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 PVMY+P I+I+ G KIGY+ + F YD YLL+TVPLPFECET A+ E PL G+ +++ Sbjct: 86 PVMYDPTIVIILQGKKIGYLGGKTFLYDPENYLLMTVPLPFECETIASVENPLVGIAISI 145 Query: 123 DILQLQELLMDIGEDEH-FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 DI LQ+LL+DIG+D+ +P G+NSA L++EILCA ERLLD M P DAR+LG Sbjct: 146 DIPMLQDLLIDIGDDDSAIRPCSCTCGVNSAPLNDEILCAVERLLDTMNNPRDARVLGPT 205 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 I+REI+Y++L G G AL ALV+R THFS I++ L+RI+N Y ++L+VEQLAAE NMSVS Sbjct: 206 IVREIIYHMLCGERGAALQALVNRHTHFSQITKALRRIKNHYADSLNVEQLAAEVNMSVS 265 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 AFHHNFK+VT+TSPLQYLK+YRLHKAR+M+++DG++A AA RVGYESASQFSREFKRYF Sbjct: 266 AFHHNFKAVTNTSPLQYLKSYRLHKARVMMLNDGLRAGVAAARVGYESASQFSREFKRYF 325 Query: 302 GVTPGEDAARMRA 314 G TPG++ R++A Sbjct: 326 GATPGDEVTRLKA 338 >UniRef50_C6DIU8 Transcriptional regulator, AraC family n=3 Tax=Pectobacterium carotovorum RepID=C6DIU8_PECCP Length = 329 Score = 314 bits (804), Expect = 3e-84, Method: Composition-based stats. Identities = 168/297 (56%), Positives = 224/297 (75%), Gaps = 1/297 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 ++ + + + + + K + L+P V++LY E R PVMYEP I+I+F G KIG Sbjct: 27 SQQTVRQRIVRQAIRCSTKNWATPSLVPQVKILYTEQHHPRVPVMYEPTIVIIFQGQKIG 86 Query: 81 YINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 Y+ + F+YD YLL+TVPLPFECET A++E PL G+ + +DI LQ+LL+DIG+D+ Sbjct: 87 YVGGKTFQYDPENYLLMTVPLPFECETIASAEHPLVGMAIRIDIQMLQDLLIDIGDDDSA 146 Query: 141 -QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 +P G+NSA L++EILCA ERLLD M+ P DAR+LG I+REI+Y++L G G AL Sbjct: 147 VRPCSCTCGVNSAPLTDEILCAVERLLDAMDNPRDARVLGPTIVREIIYHMLCGERGAAL 206 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 ALV+R THFS I++ L+RIEN Y +NL+VEQLAAE NMS+SAFHHNFK+VT+TSPLQYL Sbjct: 207 QALVNRHTHFSQIAKSLRRIENHYADNLNVEQLAAEVNMSISAFHHNFKAVTNTSPLQYL 266 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 K+YRLHKAR+M+I++G++A AA RVGYES SQFSREFKRYFG TP ++AAR++A Sbjct: 267 KSYRLHKARVMMINEGLRAGVAAARVGYESVSQFSREFKRYFGATPSDEAARLKASN 323 >UniRef50_B3E2X9 Transcriptional regulator, AraC family n=7 Tax=Bacteria RepID=B3E2X9_GEOLS Length = 314 Score = 312 bits (801), Expect = 7e-84, Method: Composition-based stats. Identities = 94/295 (31%), Positives = 166/295 (56%), Gaps = 2/295 (0%) Query: 25 ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 L + + + + ++P + L P +YEPG+ ++ G K + + Sbjct: 18 AIEELNRSIARWTEQGEMHTTVIPGLALFRRTEPTEPVSGIYEPGVCLIAQGAKRVMLGD 77 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 +RYDA YL+ +V LP + A+ E P GLRL D+ ++ +L++D + +P Sbjct: 78 DRYRYDAQHYLITSVHLPTIVQVIEASPEKPYLGLRLTFDLREVSQLMVDSNLPQP-RPQ 136 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 ++ G+ + ++ +++ A RL+D++ D IL I REI+Y +L G G L + Sbjct: 137 QSSRGMATGQVTLQLVNAFIRLIDLLADEKDIPILAPVIQREIIYRLLVGDQGERLRQIA 196 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + + I++ + +++ Y++++S++QLAA+ NMS S FHH+F+S+T+ SPLQY K R Sbjct: 197 TAGSQSQQIAKAIGWLQSNYSQSISMDQLAAQTNMSTSTFHHHFRSLTALSPLQYQKQLR 256 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 L +AR +++ + M A+ AA +VGYES SQF+RE+ R FG P D +R + + Sbjct: 257 LQEARRLMLAERMDAANAAFQVGYESPSQFNREYSRMFGAPPLRDITSLRQLAAD 311 >UniRef50_D1UN50 Transcriptional regulator, AraC family n=3 Tax=Proteobacteria RepID=D1UN50_9BURK Length = 379 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 142/316 (44%), Positives = 193/316 (61%), Gaps = 5/316 (1%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 M + QS+ P + L + + L K+ L V L+ TP Sbjct: 51 MSPHSPQSSLSSAPS----ADAHAAQQRLTEVFDMLAPKQGMTRSSLEGVNLMRANTPMP 106 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 R PVMYEP I+I+ G K GY+ ++VF+YDA +YL+L+VPLPFECET A+ P G+ + Sbjct: 107 RMPVMYEPSIVIVCQGRKRGYLGDQVFQYDAQQYLVLSVPLPFECETEASPGEPFLGISI 166 Query: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGK 180 VD+ + ELLM + E + GI S L + A +RLL+ + PLDARIL Sbjct: 167 RVDLTMVAELLMALNETQG-TARNEPLGIYSTPLDPALSSAVQRLLEALMSPLDARILAP 225 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 I+REI Y VLTG G A+ A ++ Q HF I++ L+RI Y L V+ LAAEA MS+ Sbjct: 226 GIVREICYRVLTGEQGDAIRAALTHQNHFGRIAKALRRIHADYHGALDVDTLAAEAGMSL 285 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 + FH FK+VT+TSP+QY+K RLH AR++++ DG+ A AAA RVGYESASQFSREFKR Sbjct: 286 AVFHAQFKAVTATSPMQYVKTTRLHHARLLMVQDGLNAGAAAARVGYESASQFSREFKRL 345 Query: 301 FGVTPGEDAARMRAMQ 316 FG++P ++ RMRA+ Sbjct: 346 FGLSPVDEVKRMRAIY 361 >UniRef50_Q3A5L7 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=Q3A5L7_PELCD Length = 307 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 95/299 (31%), Positives = 161/299 (53%), Gaps = 2/299 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 K + L ++ +L + + +P + L P MY+P I ++ G K Sbjct: 7 KTSDALECLLQRIARLTEQGELHTTAIPGLSLFRRTEPTEPVTGMYQPSICLIAQGAKRV 66 Query: 81 YINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + + YDA YL+ +V LP + T A+ E P GLRL D+ ++ +L+ D + Sbjct: 67 KLGDESLVYDAQHYLITSVHLPTVVQITEASPEKPYLGLRLTFDLREVSQLMAD-SQLPP 125 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + ++ G+ + ++ +L A +RL+D++ D IL I REI+Y +L G G L Sbjct: 126 PRTRESSRGMATGEVTRPLLNAFQRLIDLLNEDEDIPILAPVIQREIIYRLLVGDQGARL 185 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + + + I+R ++ ++ +T+ L ++ LA +A+MS S FHH+F+S+T+ SPLQY Sbjct: 186 RQIATAGSQSQQIARAIEWLKGNFTQPLRIDDLAEQASMSTSTFHHHFRSMTALSPLQYQ 245 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 K RL +AR +++ + + A+ A +VGYES SQFSRE+ R FG P D +R + G Sbjct: 246 KQLRLREARRLMLMERLDAATAGFQVGYESPSQFSREYSRLFGAPPLRDITNLRQVAGG 304 >UniRef50_Q3A5M5 Transcriptional regulator, AraC family n=4 Tax=Desulfuromonadales RepID=Q3A5M5_PELCD Length = 314 Score = 311 bits (796), Expect = 3e-83, Method: Composition-based stats. Identities = 90/303 (29%), Positives = 157/303 (51%), Gaps = 2/303 (0%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 + + + E L + + +P + + + P P + EP I ++ Sbjct: 8 GSVVALTKSEPLTALVADIARWTTGCGEFQTPVPGLTFYHHDQPTEPKPGLTEPSICLIA 67 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMD 133 G K ++ + F YDA+ YLL +V LP + A+ P GL L D+ +L L++D Sbjct: 68 QGAKRIHLEDETFDYDAHRYLLASVYLPTTYQVISASPGEPYLGLVLKFDMRELSRLMID 127 Query: 134 IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG 193 + +++ ++ +L A +RL+ ++ P D IL + REILY +L G Sbjct: 128 SN-LPATRTRDIDRCMSTGEVTLPLLSAFQRLVALVNEPEDIPILAPMLHREILYRLLVG 186 Query: 194 PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTST 253 G L + + + ++R ++ ++ + + L +++LA ANMS S+FH +F+++TS Sbjct: 187 DQGDRLRQIAASGSRSHQVARAIEWLKTNFAQQLRIDELAGMANMSASSFHSHFRAMTSL 246 Query: 254 SPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 SPLQY K+ RL +AR +++ + + A+ AA +VGYES+SQFSRE+ R FG P D +R Sbjct: 247 SPLQYQKHLRLQEARRLMLAEDLDATRAAFQVGYESSSQFSREYSRLFGAPPLRDVNSLR 306 Query: 314 AMQ 316 Sbjct: 307 QAA 309 >UniRef50_Q1H3T0 Transcriptional regulator, AraC family n=27 Tax=cellular organisms RepID=Q1H3T0_METFK Length = 346 Score = 310 bits (795), Expect = 4e-83, Method: Composition-based stats. Identities = 131/305 (42%), Positives = 194/305 (63%), Gaps = 4/305 (1%) Query: 11 RIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 +P D+ R+ +++ + +L E LL VRL+ + P RTPV+YEP I Sbjct: 30 AEMPHTQPDLSRQ---AEMSELIQQLAPHEGHTRSLLDGVRLMRADRPLGRTPVLYEPSI 86 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQEL 130 +I+ GHK GY+ +RV+ YD YL+L+VPLPF ET A+ E PL + + +D+ + +L Sbjct: 87 VIVCQGHKRGYLADRVYHYDPQHYLVLSVPLPFSSETDASPEEPLLAVSVRLDMTAVADL 146 Query: 131 LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 ++++ + P+ A +GI S L + RLL + L+AR+LG I+RE+ + V Sbjct: 147 VIEVDQQASPVPA-APAGIVSTPLDATLADTTVRLLRALRSTLEARVLGPAIVRELCFRV 205 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L G GGA+ A ++ +F I+RVL+RI N Y + L V+ LA EA +SV AFH +FK+V Sbjct: 206 LLGEQGGAIRAALANHGNFGRIARVLRRIHNDYAQPLDVDTLAREAGLSVPAFHAHFKAV 265 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 +TSP+QY+K+ RLH+AR+M+I D + A+ AA RVGYES SQF+REFKR FG +PGE+A Sbjct: 266 AATSPIQYIKSVRLHQARLMMIRDNVTAAGAAARVGYESPSQFNREFKRLFGRSPGEEAR 325 Query: 311 RMRAM 315 MR+ Sbjct: 326 EMRSA 330 >UniRef50_B4EQD3 AraC family regulatory protein n=13 Tax=Proteobacteria RepID=B4EQD3_BURCJ Length = 338 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 3/293 (1%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 E+ R LA++V + + L +P++ E P M EP ++ G K Sbjct: 36 NELRRTLAERVARWTEGVDHLDTAIPNLSFHRREAPTQPMECMVEPSFGLVVQGAKRVMQ 95 Query: 83 NERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + + YDA+ +L+ ++ LP + A+ + P GL L +D + EL+M + D Sbjct: 96 SGDAYIYDADRFLITSLDLPGSTQIIEASPDKPFLGLGLKLDFRVMAELMMQVAPDHDDA 155 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 P A G+ ++E + A RLL +++ P +LG I REI Y +LT GG L Sbjct: 156 P--AGRGLVVGDMTEPLYDALNRLLALLDDPHAIAVLGPYIEREIYYRLLTSDQGGRLRQ 213 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + S + + +SR ++ + Y E+L V+ LAA+ MS S FHH+F+ +T SPLQY K Sbjct: 214 IASTGSQCNRVSRAIRWLRAHYDESLRVDDLAAQVQMSSSTFHHHFRQLTGMSPLQYQKW 273 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL++AR +++ + + A++AA RVGY S +QF+RE+ R FG +P D +R Sbjct: 274 IRLNEARRLMLAERLDAASAAFRVGYASPTQFNREYSRLFGNSPRRDIDSLRG 326 >UniRef50_Q7CW43 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q7CW43_AGRT5 Length = 305 Score = 304 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 2/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + + + + + LP ++L+ PV+YEP + ++ G K + + Sbjct: 5 HTIEATIARHAPHDGTFETQLPGLKLIRCSETTLPMPVVYEPTLCLVAQGRKQAVLGQTS 64 Query: 87 FRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 F YD + YL+ +V LP A+ + P ++L++D ++L +L + ++H P Sbjct: 65 FVYDPSSYLVASVDLPVMGSVIEASKDKPYLSMQLDLDTVELADLAIRYPSEQHA-PING 123 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ + E I+ AA RLL +++ P D L REILY ++TG G AL +V Sbjct: 124 PIGLLLNKVDEGIIDAASRLLALLDTPRDIDALSPLAKREILYRLITGVGGAALRQIVQA 183 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 H + I+R + I + E SVE A A MS S FH +FK+VT+ SPL++ RL Sbjct: 184 GAHVNQIARSIVWIRKHFRETCSVEAGAEVAGMSRSTFHAHFKAVTNMSPLEFRTQLRLQ 243 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR +++ +G+ A+ A +VGY S SQFSRE+ R FG++P + A +R Sbjct: 244 EARRLMLSEGLDAATAGFQVGYASPSQFSREYGRVFGMSPAKHANALRQ 292 >UniRef50_A8KCK0 HTH AraC-type regulator n=1 Tax=[Polyangium] brachysporum RepID=A8KCK0_9BURK Length = 322 Score = 303 bits (777), Expect = 4e-81, Method: Composition-based stats. Identities = 93/309 (30%), Positives = 165/309 (53%), Gaps = 4/309 (1%) Query: 3 QNCAQSNCRIIPKKLRDMKREEIC-RLLADKVNKLKNKENSLSGLLPDVRLLYGETPF-A 60 Q+ Q+N +P + ++ + LA +N+ ++ + +P + ++ TP Sbjct: 4 QDQVQTNNAALPSLEVNAVKDNVRVSELARLLNQHAPRKGVGATAIPRLSVIKLSTPSDE 63 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLR 119 ++EP + I+ G K + + V+ YD + +L+ + LP + T AT E P R Sbjct: 64 LVHALHEPAVCIIAQGAKRVMLRDEVYCYDTSRFLVFSTDLPISAQVTDATFERPYLCFR 123 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 L++D ++ EL++ +G + + G+ + ++ +L AA RLL +++ P D L Sbjct: 124 LDLDPKEVSELVLQLG-APPATRNATSRGLFLSAATDAMLDAAVRLLRLLDTPEDVPALA 182 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 RE++Y +L G L + + ++R + ++ Y E L V++LA MS Sbjct: 183 PLATRELVYRLLKSEQGERLAQVARADSPGHRVTRAIAWLKANYAEPLKVDELARCCCMS 242 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S+ HH+F+ +TS SPLQY K RL +AR +++ +G++ S AA VGYESASQFSRE+ R Sbjct: 243 TSSLHHHFRVLTSMSPLQYQKQLRLQEARRLMLSEGIEVSKAAYTVGYESASQFSREYSR 302 Query: 300 YFGVTPGED 308 +G+ P +D Sbjct: 303 LYGIAPSKD 311 >UniRef50_Q3JGA1 AraC family regulatory protein n=57 Tax=Bacteria RepID=Q3JGA1_BURP1 Length = 390 Score = 303 bits (776), Expect = 6e-81, Method: Composition-based stats. Identities = 93/301 (30%), Positives = 149/301 (49%), Gaps = 2/301 (0%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73 P RE R LA + + + + +P + +P + + Sbjct: 83 PDAQTLAPREAARRELAALIERFAPADGAHPSAIPALSFFRCSSPVDLGCSVTRAAFVFA 142 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLM 132 G K + + + YD + L+ +V LP + T A++ P +++ +D+ ++ EL Sbjct: 143 AQGAKRVTVAGQAYEYDHQQCLVTSVDLPMLSQVTRASAGAPYLCVKIALDVQRIAELSA 202 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 ++ + GI LSE + AA RL+ +++ P D IL I +E+LY +LT Sbjct: 203 EM-RMPPPEAVPTGEGIVVGALSEPLFDAALRLVRLLDTPADIPILAPLIEKELLYRLLT 261 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 G L + + I+R ++ + + YTE L VE LA + NMSVS+ HH+FK VT+ Sbjct: 262 SGLGARLRHIAVAGSQTYRIARAIEWLRHHYTEPLRVETLAQQVNMSVSSLHHHFKHVTT 321 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 SPLQY K RLH+AR +++ + A+RVGY+S SQFSRE+ R FG P D + Sbjct: 322 LSPLQYQKQLRLHEARRLLLGQHGDVGSVALRVGYDSPSQFSREYSRLFGAPPLRDVVQR 381 Query: 313 R 313 R Sbjct: 382 R 382 >UniRef50_D2C3B7 Transcriptional regulator, AraC family n=2 Tax=Enterobacteriaceae RepID=D2C3B7_DICD5 Length = 300 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 102/300 (34%), Positives = 165/300 (55%), Gaps = 2/300 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + LA V K+ + +P + L A P +Y G+ I G K Sbjct: 1 MLAQNGSERLALLVAKMATIDGDYETAIPALSLYRRSAATAPMPCIYGLGLGITVQGGKR 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + +++F Y + L+ +V LP T A+++ P G+RLN+D + +L+ D+ + Sbjct: 61 VTLGDKIFDYGPGQSLVTSVDLPVVSHVTKASTDEPYLGIRLNLDARLISQLVADM-DFS 119 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 H + + S I+ L E +L A RL+ ++ + I +EI +L G G Sbjct: 120 HTAKTCSTSAISVVELDESLLEAICRLIRLLNDHTLLPHIAPLIQQEITARLLHGQHGPT 179 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L LV++ + I++VL ++ +T++LS+E+LAA+A MS SAF +F+S+T SPLQY Sbjct: 180 LRHLVTQGSPGQQIAKVLSWLKLNFTQDLSMEELAAKAYMSPSAFRQHFRSLTDMSPLQY 239 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 LKN RL +AR +++++ + AS+AA+RVGYESASQFSRE+ R FG P D ++R + Sbjct: 240 LKNLRLQEARQLMMNESLDASSAAVRVGYESASQFSREYTRLFGSPPLRDMKKLRKYSSS 299 >UniRef50_C5CMS2 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CMS2_VARPS Length = 330 Score = 300 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 91/314 (28%), Positives = 159/314 (50%), Gaps = 3/314 (0%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLK-NKENSLSGLLPDVRLLYGETPF 59 M Q+ + I + + +E + L +N++ ++ ++ + +++ P Sbjct: 1 MPQDTPEIAAAIAQPMPLEPELDEARKELVALINRITRGQDGTVETPVAGLQVFCISKPD 60 Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGL 118 P + ++ G K + + ++ YD YL+ +V LP + TS+ P G+ Sbjct: 61 GPKHAFATPALGLIAQGSKRIIVGDDIYVYDPMHYLVTSVDLPVCGQVRLTSDNEPYLGV 120 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 RL + I ++ +L+ D + + A+ G+ + +L RLL ++E P D I+ Sbjct: 121 RLELAIDEIGKLIGD-EKLPAKANAPASRGMYVNRIGMPVLEPVLRLLRLVESPEDVPIM 179 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 I REI+Y +L G L + + +H I++ + + Y+++L +E +A +M Sbjct: 180 APLIKREIMYRLLVNGEGARLRQIALQDSHTQRIAKAISALRINYSQSLRIEDMARAVHM 239 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 SVS+FHH+FK+VT+ SPLQY K RL +AR ++ G S+AA VGYES SQF+RE+ Sbjct: 240 SVSSFHHHFKAVTAMSPLQYQKQLRLQEARRQMLMAGADVSSAAHSVGYESPSQFAREYS 299 Query: 299 RYFGVTPGEDAARM 312 R FG P D R Sbjct: 300 RMFGAPPLRDKRRW 313 >UniRef50_B4X416 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X416_9GAMM Length = 355 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 95/301 (31%), Positives = 158/301 (52%), Gaps = 6/301 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + + LA V + + L +P V L + + +YEP +I + G K + Sbjct: 52 TLEQQLAQLVCEQIAEPGMLDSGIPGVSLYRADDTSSCASTVYEPSLIFILQGTKTIELG 111 Query: 84 ERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGE-----D 137 +R Y + YL +V LP + A+ P ++++VD ++ +L++++G+ + Sbjct: 112 DREIVYGPSSYLASSVHLPVLGQIVDASPNHPYLAVKIDVDPQEVTDLVLELGDKVGRYE 171 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 + G+ + + E + A RLL++M P D +L REI+Y L G G Sbjct: 172 PGNECPEVGCGLCMSHMDESMQGALYRLLNLMTTPDDIAVLAPLTRREIIYRSLIGEMGP 231 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 + S + + ISRV+ ++++Y+E L V+ LA ANMS S H+FK VT SPLQ Sbjct: 232 RMRKFASIDSQANRISRVISTLKDRYSEPLRVKDLADSANMSESTLFHSFKQVTRMSPLQ 291 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 + K RLH+AR +++ +G++A+ A+ RVGYES S FSRE+ R FG P D +++R Q Sbjct: 292 FQKKLRLHEARRLMLTEGLEAATASYRVGYESPSHFSREYSRLFGAPPRADVSKLRGAQA 351 Query: 318 N 318 Sbjct: 352 G 352 >UniRef50_Q2SF73 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF73_HAHCH Length = 320 Score = 300 bits (768), Expect = 5e-80, Method: Composition-based stats. Identities = 127/281 (45%), Positives = 172/281 (61%), Gaps = 1/281 (0%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L D +N+ + LP+V P R PV+YEP I+I+ G K GY+ E+ + Sbjct: 31 LFVDLLNQHAKQVGVNHTPLPEVTTFRVVKPSPRQPVVYEPAIVIVGQGGKRGYVGEQTY 90 Query: 88 RYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YDA YL+L+VPLPFECE A+ E PL GLR+ VD L L +LL+D+G+ Sbjct: 91 TYDAYNYLVLSVPLPFECEIYEASPESPLLGLRILVDTLALNDLLIDMGDPPSRTSGDIP 150 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 I S L++ ++ A RL+ V+ P +A+ILG QI+REI Y VL G G L A + Sbjct: 151 KSIYSTPLNDTLIEACIRLVKVLSDPAEAKILGPQILREIYYRVLCGDRGETLRAAANHN 210 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + + I++VLK I +Y + L ++ +A ANMS S HHNFK+VT SPLQYLK+ RLH+ Sbjct: 211 SRVAQIAKVLKMIHQQYDQPLDIDTMARAANMSHSTLHHNFKAVTDCSPLQYLKSIRLHQ 270 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 AR ++ G+ AS AAM+VGY S SQFSREFKR FG P + Sbjct: 271 ARNLLARGGINASTAAMKVGYVSPSQFSREFKRLFGAPPRD 311 >UniRef50_B8DKQ8 Transcriptional regulator, AraC family n=2 Tax=Desulfovibrio RepID=B8DKQ8_DESVM Length = 292 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 115/282 (40%), Positives = 166/282 (58%), Gaps = 3/282 (1%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 +A+ ++KL E LP V L RTP++Y+ G+IIL G K+ + RV+ Sbjct: 3 EIAELMSKLAINEGKTETGLPGVGLYRTSGSIHRTPLLYQQGLIILGQGAKLVHFGGRVY 62 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGED---EHFQPSM 144 +YD + YL L+VP+ ECE AT E PL L +++D+ L +L+ I + Sbjct: 63 QYDQDHYLALSVPIAAECEAVATPEKPLLSLVVDIDLGVLNQLIGQIEDRIDYRSLTQGC 122 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 G+ A +RLL + PL+A++LG ++RE+L+ VL G AL AL + Sbjct: 123 THQGLFLAKADAAFRNTVQRLLLALSCPLEAQVLGPGLVRELLFRVLCGENAAALHALAT 182 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + T+ S I + LK+I ++E +V+QLA NMS S FH FK VT+ SP+QYLK RL Sbjct: 183 KNTNMSRIEKALKQIHGNFSEPFNVDQLAGFVNMSPSTFHRAFKDVTAFSPIQYLKRVRL 242 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 +KAR ++ DG++AS AA VGYES SQFSREF+RYFG++P Sbjct: 243 NKARSLLREDGVRASEAARMVGYESVSQFSREFRRYFGISPS 284 >UniRef50_C3X2I3 Transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X2I3_OXAFO Length = 304 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 86/305 (28%), Positives = 153/305 (50%), Gaps = 3/305 (0%) Query: 13 IPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIII 72 +P + + +K+ K + + L + YEP + + Sbjct: 1 MP-ANSQTSLMDKNHTIREKLLKWVPEPGDYQTPIEGFSLFRRDDCDVCDSCFYEPAVGV 59 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELL 131 + G K + + + Y N+ LL +V LP + A E P GL L +D + +L+ Sbjct: 60 VIQGKKRSVVGSQEYHYRENDSLLNSVDLPSKNYILDAGPEKPFLGLGLKIDKYMVGQLI 119 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 ++ G++ + ++L A RL ++++ P +L I+REI Y +L Sbjct: 120 SELPHLSQ-NSDEPVRGLSVTPIEADLLDAFLRLTELLDNPEQIPVLAPMIVREIHYRLL 178 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 GP G L A+ + + + I++V+ + N Y E L V++LA +ANM+ S FH +FK +T Sbjct: 179 VGPRGRFLRAINTAGSQGNRIAQVISWLRNNYKEPLQVDELARKANMATSTFHRHFKQIT 238 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + SPLQY K RL++A+ +++ + A+ A + VGYES +QF+RE+KR FG P + + Sbjct: 239 TLSPLQYQKRLRLYEAQRLMLVENEYAANACLAVGYESPTQFNREYKRLFGEPPSRNIHK 298 Query: 312 MRAMQ 316 +R ++ Sbjct: 299 VREVR 303 >UniRef50_B2J894 Transcriptional regulator, AraC family n=6 Tax=Bacteria RepID=B2J894_NOSP7 Length = 326 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 160/314 (50%), Gaps = 7/314 (2%) Query: 7 QSNCRII--PKKLRDMKREEICR-LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTP 63 +SN ++ P+ R + R + R L + + + + ++ L + +P Sbjct: 9 KSNIDLMNDPQAKRQVDRAQANRDELKELIAQAIPHDGTIE-PLKGLHFNRSSSPSECVH 67 Query: 64 VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNV 122 + P + G K + ++YD YLL TV LP + A+ P LRL++ Sbjct: 68 SVSIPAFCAIAQGSKEVLLGSERYQYDPMHYLLATVELPIVSQILEASKAQPYLSLRLDL 127 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQI 182 D + ++++ G + I+ + L+ +L A RL+ +++ P +A +L I Sbjct: 128 DPTLVGSVMVEAGYPSRRRA--DVKAIDVSPLNANLLDAVVRLVRLLDSPAEAHVLAPLI 185 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 REI+Y +L G G L + + I+R ++R+ + E + +E +A E MSVS Sbjct: 186 KREIIYRLLMGEQGNRLRHIAVLGGYTYHIARAVERLRKDFNEPIKIESIARELGMSVSG 245 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 FHH+FKSVT+ SPLQY K RL +AR +++ + + A++AA RVGY+ AS F+RE+KR FG Sbjct: 246 FHHHFKSVTAMSPLQYQKQLRLQEARRLMLGEKLDATSAAYRVGYDDASHFNREYKRLFG 305 Query: 303 VTPGEDAARMRAMQ 316 P D R+R Sbjct: 306 APPMRDVERLREAA 319 >UniRef50_B2I1B8 AraC-type DNA-binding domain-containing protein n=5 Tax=Acinetobacter RepID=B2I1B8_ACIBC Length = 294 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 2/294 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 R + LA V++ ++ + + + L ET + M + + ++ G K Sbjct: 2 ANRSNHNQELAQLVDQWTREKGTFETAITGLTLYRAETLTKPSSSMMDASLCMIAQGKKQ 61 Query: 80 GYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 ++E + YD+N +L + LP + A+ E P + L +D L +++++ Sbjct: 62 VILSEETYTYDSNHFLFTAIDLPVIAQVLEASVEQPYLSIVLRLDPYLLAQIMLE-AHIP 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + G+ ++ E+ A RL+ +++ P D IL II+EI Y +L P G Sbjct: 121 FKDVNTEKKGMAVGVVNSELNDAFIRLIKLLDTPQDIPILSPLIIKEIFYRLLMSPQGDR 180 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L +V+ T I + ++ ++ + + S+E+LA+ MS S+FH +F+ +TS SPLQY Sbjct: 181 LKRIVAAGTTGHRIVKAIEWLKTNFAKPFSIEELASTMGMSASSFHQHFRDITSMSPLQY 240 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 K RL +AR +++ + S+ +M+VGYES SQFSRE+KR+FGV+P D + Sbjct: 241 QKRMRLTEARRLLMTEEYDISSTSMQVGYESLSQFSREYKRFFGVSPSVDIKNI 294 >UniRef50_C3X9E6 Transcriptional regulator n=2 Tax=Proteobacteria RepID=C3X9E6_OXAFO Length = 304 Score = 297 bits (760), Expect = 5e-79, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 2/303 (0%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 + E + +K+ K + + L YEP + ++ Sbjct: 2 GQDNQTGFENKNDPIKEKLLKWLPESGEYQTPVNGFFLFRKNECECPENCFYEPAVGVII 61 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMD 133 G K YI R +RY L+ + LP + AT + P G+ + +D +L + Sbjct: 62 QGQKHSYIGSREYRYGEGYCLVNGIDLPAKNTILDATPDNPFLGMGIRLDKSLTTQLAAE 121 Query: 134 IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG 193 I + G++ +IL A RLLD++E+P ++ I+REI Y +L G Sbjct: 122 IPP-PPKTGNEPDCGLSLTRTDPDILDAFARLLDLLEKPEQIPVMAPMILREIHYRLLIG 180 Query: 194 PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTST 253 P G L + + T + +++ + + N Y E + V++LA + NM+ S FH +FK +TS Sbjct: 181 PQGSFLRTVNTFGTQGNQVAQAISWLRNNYKEPVQVDELAKKVNMATSTFHRHFKQLTSL 240 Query: 254 SPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 SPLQ+ K RL++A+ +++ + A+ A M VGYES +QF+RE+KR FG P + ++R Sbjct: 241 SPLQFQKRLRLYEAQRLMLVENEYAANACMAVGYESPTQFNREYKRLFGEPPSRNINKVR 300 Query: 314 AMQ 316 ++ Sbjct: 301 ELR 303 >UniRef50_A6B9E2 Transcriptional regulator, AraC family n=5 Tax=Gammaproteobacteria RepID=A6B9E2_VIBPA Length = 307 Score = 296 bits (759), Expect = 6e-79, Method: Composition-based stats. Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 2/298 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 R + LA +++ N + +R TP T + P I ++ G K Sbjct: 11 SRAFATQKLAKLIDRWTGDANQYDTPISGLRFSRWTTPTPPTSYTHNPSICLIAQGRKRV 70 Query: 81 YINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + E F YDAN +L+ ++ LP A+ E P GL + +D+ ++ +L++D GE Sbjct: 71 LLGEESFIYDANHFLISSIDLPIIANIIEASEEQPYLGLIMELDLTEISQLIVD-GELAF 129 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 Q A GI LSE +L A RL +++ + +IL I REI Y +L G L Sbjct: 130 IQSKEAQKGIAVGELSESLLDAFVRLAELLNEGQNIKILAPIIKREIFYRLLMSEQGTRL 189 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 +V+ +H I++ + ++N + + LSV LA+ MS S+F+ +F+S+TS +PLQ+ Sbjct: 190 HQIVTAGSHSHQIAKAIDWLKNNFVKPLSVGDLASYTGMSKSSFYTHFRSMTSMTPLQFQ 249 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 K RL +AR +++ + + A AA +VGYES SQFSRE+ R FG P +D +R G Sbjct: 250 KKLRLSEARRLMLTENLDAMAATFKVGYESPSQFSREYSRLFGAPPSKDIKSLRENLG 307 >UniRef50_Q1QZB6 Transcriptional regulator, AraC family n=10 Tax=Gammaproteobacteria RepID=Q1QZB6_CHRSD Length = 306 Score = 295 bits (757), Expect = 9e-79, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 172/305 (56%), Gaps = 3/305 (0%) Query: 12 IIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGII 71 P + LA ++ L +E + LP V+L+ ARTP+MYEP ++ Sbjct: 4 PAPYATSPAADHGLEARLASRLAPLATQEGFAATPLPGVQLITSHCGHARTPLMYEPSLV 63 Query: 72 ILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELL 131 I+ G+K GY+ +R+ Y A YL+ +PLPFECET+A+ PL GL +++D+ L EL+ Sbjct: 64 IIVQGNKTGYLGDRIIHYGAGHYLIQAMPLPFECETHASDTAPLLGLSVSLDMAMLGELV 123 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 + P+ + + + + ++ + RL+D + A LG IRE+L+ L Sbjct: 124 RRLP---TAPPTRMPAPMAAVDMDADMGDSVMRLIDCLHDHEQAAALGDGRIREVLFAAL 180 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 GP G +L LV+ +S I+ L + +Y ++L+VE LA NMS S FHH+FK T Sbjct: 181 RGPQGASLRQLVAHHGQYSRIAEALTFLHQQYAQSLNVESLARRVNMSASHFHHHFKRTT 240 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 +P+QYLK RL KAR+++ G + + AA +VGY+SASQFSR++KRYFG +P +D Sbjct: 241 QLAPMQYLKRLRLLKARVLLTQQGYQVAQAATQVGYQSASQFSRDYKRYFGQSPLDDRQS 300 Query: 312 MRAMQ 316 A Sbjct: 301 RSAHS 305 >UniRef50_Q0C048 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=Q0C048_HYPNA Length = 307 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 2/291 (0%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + + + E + V ++ +Y P + I G K Sbjct: 4 SLLAAVNAWIETQGGGEGLFPTQIESVHIVRSFEARMPMRQVYRPSLCIALQGAKEILFG 63 Query: 84 ERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 + VFRY A E L + + LP A+S+VP G+ L++D+ L+++L + E Sbjct: 64 DDVFRYGAMECLAVGLDLPASGRVVEASSDVPYIGITLDLDMAILRDVLGYL-ETLPVPA 122 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 S + + AT + + +RL+ +++ P IL I+REI Y++LT P GG L L Sbjct: 123 SGSGPCLFVATADQTLADCLQRLIRLLQTPEAIPILYPAIMREICYWLLTSPNGGELRNL 182 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 +T+ ++RV+ + + + L VEQLA A MS S+FHH+FK++TS +PLQY K Sbjct: 183 ALPETNSDRVARVIHLLHANFAQTLRVEQLAETARMSASSFHHHFKALTSMTPLQYQKQL 242 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL +AR +++ + + AA +VGYES SQFSRE+ R FGV P +D ++ Sbjct: 243 RLLEARRVMVTEAASVAEAAYQVGYESPSQFSREYSRMFGVAPKQDVLNLQ 293 >UniRef50_A6GGU5 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGU5_9DELT Length = 301 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 98/302 (32%), Positives = 157/302 (51%), Gaps = 2/302 (0%) Query: 17 LRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 + ++ LA ++ +L E S +P +R+ P V Y+P + ++ G Sbjct: 1 MILLRMTTQRDSLAARIERLAVGEGSTETAVPGLRVFRATEPVGPFAVEYQPCLCVVGQG 60 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG 135 K + + YD ++YL++ +PLP A+ E P + L +D+ +L +LLM + Sbjct: 61 RKAATVGAQTCEYDPDQYLVVALPLPVSARIIEASREQPFLSMVLAIDVAELGQLLMAMP 120 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + E ++ + +++ + A RLL E P +AR+LG I+REIL++VL G Sbjct: 121 D-EPEPERAPSTAMWVSSIEPRLRDAVLRLLQAAEDPTEARVLGPGIVREILFHVLGGDQ 179 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L +L R H + R ++ +++ Y + L V +A +S S H FK VT SP Sbjct: 180 GALLRSLALRNGHGQRVVRAIRFMQDHYEQALDVATIAKSVGVSASRLQHVFKDVTGLSP 239 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +QYLK RLH+A +MI+ +G+ A AA RVGY S SQFSREFKR FG++P + Sbjct: 240 IQYLKRVRLHRAHVMILTEGLGAGEAAFRVGYGSPSQFSREFKRQFGLSPSHAVREQQGT 299 Query: 316 QG 317 Sbjct: 300 TA 301 >UniRef50_C4XTV7 AraC family transcriptional regulator n=5 Tax=Bacteria RepID=C4XTV7_DESMR Length = 294 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 118/297 (39%), Positives = 167/297 (56%), Gaps = 6/297 (2%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M+ +I LL + L VR P R P++Y PGI I+ GHKI Sbjct: 1 MQMPKIVELLGKF---QITDGGATESRLTGVRFFKDTQPVPRRPMLYNPGICIVAQGHKI 57 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 GY+ FRYDA+ YL+ +V +PFECET+A+ + PL GL +++D+ QL +L+ + E Sbjct: 58 GYLGGHTFRYDADNYLVTSVAMPFECETFASQDDPLLGLYIDIDMAQLHDLIGQMALQEE 117 Query: 140 ---FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + GI +T+ E++ A +LL + +A+IL ++REI Y L G Sbjct: 118 VGKLGENDFPLGIGPSTMDEDMRDAVIKLLKALWTETEAKILAPGLVREIYYRALRGTQA 177 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L +L F+ + R +K +++ Y++ L +E LA ANMSVSAFH FK +T SPL Sbjct: 178 PVLYSLARGNGSFAQVGRTIKMMQSNYSKKLEIEDLATTANMSVSAFHKAFKEITCDSPL 237 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 QYLK RL +AR +I+ KA AA VGYES SQFSREFKRYFG +P + +R Sbjct: 238 QYLKKIRLSRARDLIVQQKAKAYMAASEVGYESPSQFSREFKRYFGHSPADLMREVR 294 >UniRef50_B2KD36 Transcriptional regulator, AraC family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KD36_ELUMP Length = 298 Score = 293 bits (750), Expect = 7e-78, Method: Composition-based stats. Identities = 95/294 (32%), Positives = 158/294 (53%), Gaps = 4/294 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E+ + L +KV L K S + + +R+ P Y+P I ++ G K N Sbjct: 7 ELNKQLQEKVLNLVPKPGSFATDIKGLRIFRRNQPEEARKCFYKPIIALMLQGSKQCVFN 66 Query: 84 ERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 Y ANE L+ ++ +P T A+ E P G+ L +D +++L+++ + P Sbjct: 67 AEKIEYVANECLVTSIDIPSASRITDASPEKPCIGVTLGIDSFIIKQLIIETNLLKTDYP 126 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDAR-ILGKQIIREILYYVLTGPCGGALLA 201 A + + EIL A R++ ++E+P + + IL IIREI Y +L P G L Sbjct: 127 --AQRAVGVTKANSEILDAFLRIVTLLEQPKEQQNILAPMIIREIYYRLLMTPVGEQLRM 184 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + T + I+ ++ ++ + E L+VE+LAA+ NMS S+F+ NF+ VT SPLQY K Sbjct: 185 VNTVGTKSNQIATAIEWLKENFKEELNVEKLAAKVNMSPSSFYRNFRKVTDVSPLQYQKQ 244 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 RL++A+ +++ D + A+ A VGYES +QF+RE+KR FG P D ++ + Sbjct: 245 LRLYEAQRLMVSDNLDAANAGYAVGYESPTQFNREYKRMFGNPPKTDIKILQTL 298 >UniRef50_C9Y4C2 Uncharacterized HTH-type transcriptional regulator yqhC n=1 Tax=Cronobacter turicensis RepID=C9Y4C2_CROTZ Length = 340 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 1/295 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + + R + +L +E L VR + ARTPV+YEP I+I+ G K Sbjct: 30 MTMQPVQRETIALLEQLAPQEGYTRSQLDAVRFMRSNRALARTPVLYEPCIVIVCQGCKR 89 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 GY+ ++++ Y+A+ YL+L+VPLPF ET AT + PL + + +++ + EL++ + + E Sbjct: 90 GYLADKIYTYNASHYLVLSVPLPFSTETDATPQKPLLAVAVRLEMTVIAELVLAL-DGER 148 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + GI S L + RLL + P +A+ILG I++E+ Y VL G GGA+ Sbjct: 149 GAGAAPPEGILSTPLDAPLADTTLRLLRALSHPQEAQILGPAIVKELYYRVLIGEQGGAI 208 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 A ++ FS ISRVL+RI Y L V LAAEA MS AFH +FK+VT SP+QY+ Sbjct: 209 RAALASFGKFSRISRVLQRIHADYAGRLDVATLAAEAGMSAPAFHAHFKAVTRNSPVQYI 268 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RLH+AR+++I D + A+ AA+RVGYES SQF+REF+R FG TPG + M+ Sbjct: 269 KAVRLHQARLLMIRDNLSAATAALRVGYESPSQFNREFRRLFGRTPGAETREMKQ 323 >UniRef50_C6D8S3 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D8S3_PAESJ Length = 305 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 2/296 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 ++ E+ R LAD + + + +P++ L++ +Y+P + ++ G K Sbjct: 5 LRMEQALRQLADLILRHAPSSGTFPTSVPNLSLMHATHLSEPLESVYKPSLCLVALGAKT 64 Query: 80 GYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + + +RYD ++++ LP + A+ E P L+L+ D + +++ + Sbjct: 65 ATLGDETYRYDPMTFVVIAAELPIISKIVEASPEAPYLSLKLSFDPDVILDMVKES-SHA 123 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 P+ A+ GI S +L AA RL+ +++ P D +L I+REILY VL G Sbjct: 124 AASPADASPGITMNRTSPGLLEAAVRLVQLLDTPEDIPVLAPLIVREILYRVLQSEHGSL 183 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 + + +H I++ ++ I +Y E L ++QLA A++S SAFH +FK VTS SPLQY Sbjct: 184 IHSFAMIGSHSHNIAQAIRMINRQYAEPLVIDQLAKVASLSTSAFHKHFKRVTSMSPLQY 243 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RL +AR +++ + + AS AA RVGYES SQFSRE+ R +G P D RA Sbjct: 244 QKTLRLQEARRLMLTETVHASEAAFRVGYESPSQFSREYARMYGRPPMLDIQEQRA 299 >UniRef50_B9Z2E6 Transcriptional regulator, AraC family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z2E6_9NEIS Length = 324 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 92/298 (30%), Positives = 152/298 (51%), Gaps = 3/298 (1%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKEN-SLSGLLPDVRLLYGETPFARTPVMYEPGIII 72 + + E + + LA + + + + + L + P ++EPGI + Sbjct: 3 QQAREQEQLEAVRQELAAAIANWVDSDAAPYVTPIQRLTLYRLQMPSEPIRCIFEPGIAL 62 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELL 131 + G K + E Y A + L+ V +P T A+ E P L + +D+ + EL+ Sbjct: 63 IVQGSKRVLLGEETLSYHAGQLLVTAVNVPTIANITTASPEQPYLSLWMPIDLQAMAELM 122 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 ++ G +P + GI + IL + RL+++++ P +L I+REILY +L Sbjct: 123 VE-GNLSPPRPQPTSRGIAVGQANAAILKSFLRLIELLDEPETIPVLSPLILREILYRLL 181 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 G L + + + I+R + ++ + + L VE+LAA MS S FHH+FK++T Sbjct: 182 MSDFGAHLWQISTAGSQSHRIARAIDWLQANFAKALRVEELAASVQMSASTFHHHFKALT 241 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + SPLQY K RLH+AR ++++D + A+ A RVGYESASQF RE+ R FG P D Sbjct: 242 AMSPLQYQKKLRLHEARRLMLNDRLDAATTAFRVGYESASQFGREYHRMFGAPPARDI 299 >UniRef50_Q396P4 Transcriptional regulator, AraC family n=1 Tax=Burkholderia sp. 383 RepID=Q396P4_BURS3 Length = 299 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 84/295 (28%), Positives = 140/295 (47%), Gaps = 4/295 (1%) Query: 28 LLADKVNKLKN---KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 L ++V +L +E+ ++ + + LL P++ +P + ++ G K Sbjct: 4 ELVERVARLTGAPGEESPVATAIDGLILLRSNREKLPAPLIMKPALCVVVQGGKWTTFGG 63 Query: 85 RVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 R + Y L+++V +P A+ P GL L D+ ++E+L + Sbjct: 64 RRYDYGPGRALVVSVEMPATSRIVKASESEPFLGLVLEFDLAMMREVLERLDTPPPQPHG 123 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 G+ + R++ +++ P ++ + REI Y++L GP GG + +V Sbjct: 124 AIGHGVCVTDFGGPLADCVLRMMRLLDTPAAIPVVAPLVKREICYWLLAGPHGGEVSRVV 183 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 H + + + ++ E + VE LAA A MS SAFH FK++TS +PLQY K R Sbjct: 184 FANGHAQRVVAAIHALRGQFAEAIRVEDLAAVAQMSPSAFHRQFKALTSMTPLQYQKQLR 243 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 L +AR +++ A AA RVGYESASQFSRE+ R FG P D ++ Sbjct: 244 LLEARHLMVTGAANAETAAYRVGYESASQFSREYARMFGAPPRRDVVTLKIASAG 298 >UniRef50_Q4KE48 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=Q4KE48_PSEF5 Length = 323 Score = 290 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 2/316 (0%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 M + C + M + LA + + +P++ L TP + Sbjct: 8 MANRRTVAACTVATSDCPPMTQPRTPTALAALIARHTPHSGDFPSAVPNLTLHRRSTPTS 67 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLR 119 P +Y G+ ++ G K + E V Y A + +L ++ P T ++ P G+ Sbjct: 68 AIPCIYSLGLGVIAQGGKQVLLQEAVINYRAGQGMLTSIDQPVVARVTQGSAAEPFLGMM 127 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 L +D+ Q+ + + + S + L + A ERL+ +++ P L Sbjct: 128 LTLDMHQILQTAAQMQPPPPSRAS-DYRTVVVDELEPGLASALERLVGLLDEPALIPQLA 186 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 I +EI+ +L GP AL L++ + I + + ++ +T+ L V+ LA A+MS Sbjct: 187 PLIQQEIIVRLLAGPYSLALQQLLAVGSPTQQIFKTVAWLKQNFTQPLRVDDLAQRAHMS 246 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S F +F+++ SPLQ+ K RL +AR +++ + A AA VGYESASQFSRE+ R Sbjct: 247 PSTFRQHFRAIIGVSPLQFHKQLRLQEARQLMLSQNIDAGRAAGLVGYESASQFSREYSR 306 Query: 300 YFGVTPGEDAARMRAM 315 FG P D RMR Sbjct: 307 VFGAPPQRDIRRMREA 322 >UniRef50_A6F2M7 Transcriptional regulator, AraC family protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F2M7_9ALTE Length = 310 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 90/305 (29%), Positives = 148/305 (48%), Gaps = 5/305 (1%) Query: 11 RIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 P + L D V + + +R+ P +Y+ Sbjct: 2 TAQPNVIPMQPDNPSLSQLRDLVEQQWQAHGP-ESAIDGLRVTRALEPSGTIRALYQTSF 60 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQE 129 I+ G K+ + E F Y E LL +V +P ATS+ P L L++D + E Sbjct: 61 CIVLQGAKVTAVGESAFHYRQGECLLASVNVPVNSRIVQATSDKPYLALSLSIDPAMISE 120 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 LL+ E + P +++A + +E+ RLL ++++P D +L + REI + Sbjct: 121 LLVTHPEMAYRCPKQP--ALSTAGMPDELYDPVIRLLRLLDQPDDREVLEPLVRREICWR 178 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 VL P G AL + + + + I RV ++ Y + V +LAA A+MS + FH +FKS Sbjct: 179 VLRSPLGPALQQVGLKDSDTARIGRVTAWMQANYQQPFRVAELAAMASMSPATFHRHFKS 238 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +T +P+Q+ K RL +AR +++ + ++ RVGYES SQFSR++++ FG PG D Sbjct: 239 ITRLTPVQFQKLVRLQEARRLLL-SDQEVASIGYRVGYESPSQFSRDYRKLFGAPPGRDK 297 Query: 310 ARMRA 314 A MR+ Sbjct: 298 AVMRS 302 >UniRef50_B9JGH7 Transcriptional regulator protein n=14 Tax=Proteobacteria RepID=B9JGH7_AGRRK Length = 335 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 1/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 + LA + + + + + L Y P I+ GHK + Sbjct: 42 QELASIIARFATGDGEHHTPIEGLNLYRQSAATVWQHGAYRPCFAIVVQGHKTLTVGADT 101 Query: 87 FRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + Y EY+L + LP + T SE P + +D +L+ELL +G + Sbjct: 102 YHYGVGEYILTALDLPVSTQVTNVGSETPYLCFGMALDSERLKELLSRVGIPREAVTAEP 161 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ S E+L A+ RLL +++RP D + I +EILY +LTGP G LL + Sbjct: 162 VRGLAVNPASPELLDASLRLLRLLDRPEDIPAMAPLIEQEILYRLLTGPNGPRLLQVAMA 221 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ++ + ++R + I +T+ L +E+LA A MSVS+ HH+FK+VT+ +P+QY K RLH Sbjct: 222 ESQSNRVARAIAWIRGNFTQPLRIEELAERAGMSVSSLHHHFKAVTAMTPIQYQKQLRLH 281 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR ++I + + +A RVGY+S SQFSRE+ R +G++P D +R+ Sbjct: 282 EARRLMIVEQLDVGSAGHRVGYQSPSQFSREYSRLYGLSPLRDVEGIRS 330 >UniRef50_B1X2S3 Transcriptional Regulator, AraC family n=3 Tax=Cyanobacteria RepID=B1X2S3_CYAA5 Length = 313 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 163/300 (54%), Gaps = 4/300 (1%) Query: 19 DMKREEICRLLADKVNKLKN--KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 + C+ LA V + S + + L +T +Y+P + ++ G Sbjct: 8 PDVIADRCQELATLVMRHTEFNGNGIHSTAIKQLDLTRSDTVSTALHSVYQPILALVVQG 67 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQELLMDIG 135 K + E+ ++Y A +YL+++V LP AT E P GL+LN+D++QL +L++ + Sbjct: 68 QKEALLGEKRYQYGAGQYLIISVDLPLSGFVIEATPEKPYLGLKLNLDLMQLCDLVVQMS 127 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + + + G++ + + ++ A RL+ +++ P +L +I E+ Y +L G Sbjct: 128 PRLNKKE-NSVQGLSVSNVDAGLIECALRLVKLLDTPQHISMLAPIMICELNYRLLIGKQ 186 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 A+ + + ++ I+ +K ++ K+T+ + +E LA+ +MS S+FH +FK VTS SP Sbjct: 187 SEAVRQIATSGSNMQRIASAIKLLKAKFTQPIRIEDLASHVSMSTSSFHQHFKRVTSMSP 246 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 LQY K RL +AR +++ + + A +AA +VGYES+SQFSRE+ R FG P D R+R Sbjct: 247 LQYQKQLRLLEARRLMLAENVDAMSAAYQVGYESSSQFSREYARMFGAPPIRDIERLRTA 306 >UniRef50_A9IS89 Transcriptional regulator, AraC family n=13 Tax=Bacteria RepID=A9IS89_BORPD Length = 358 Score = 289 bits (741), Expect = 7e-77, Method: Composition-based stats. Identities = 93/287 (32%), Positives = 145/287 (50%), Gaps = 2/287 (0%) Query: 33 VNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDAN 92 VN+ + + + P +Y P + +L G K + E V+ Y A+ Sbjct: 64 VNRHAAADGLHQTAIEGLSFFRSSQPSELAFCVYRPSLALLVQGAKRVEVGEDVYEYSAS 123 Query: 93 EYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINS 151 YLL ++ LP T A+ P L++D L+ + G + + A G+ Sbjct: 124 HYLLTSIDLPVASRVTLASPGTPYLCFVLDLDPRDTAGLIAETGLPQPAD-TDAGRGLAV 182 Query: 152 ATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSL 211 A L +L AA R+ +++ P D ++L + REI+Y +LTG GG L + + Sbjct: 183 AQLCPPLLDAALRMARLLDAPQDIQVLAPLLRREIIYRLLTGALGGRLRHIARHEGPTHQ 242 Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 + + ++ ++ + L +EQLA NMS S+ HH+FK+VT+ SPLQY K RL +AR ++ Sbjct: 243 VRQAIEWLQAHFDRPLRIEQLAHTVNMSTSSLHHHFKAVTAMSPLQYQKQLRLQEARRLL 302 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A AAA +VGYESASQFSRE+ R +G P D AR+R Sbjct: 303 LAGLADAGAAARQVGYESASQFSREYSRQYGAPPRRDVARLRGASAE 349 >UniRef50_B0T4V7 Transcriptional regulator, AraC family n=2 Tax=Caulobacter RepID=B0T4V7_CAUSK Length = 303 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 3/290 (1%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 LA + + ++ ++ P T ++ + ++ G K V Sbjct: 6 ELAALIERYAPEDGFYDICGDKASVVRVSKPSEPTHGVFGAAVCVVAQGRKKVLAGGSVL 65 Query: 88 RYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YDA YL+ +V LP + A+ E P R+ +D + +LL+ +G + Sbjct: 66 VYDAMHYLVASVDLPVIGQVVDASPEEPYLCFRMTLDPAVIGDLLLQLGGEPALAQDAGP 125 Query: 147 S--GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 + + ++ +L A R++ +++ P DA IL I REILY +L G G L + Sbjct: 126 LVGAMAVSQVNPPLLDAVMRMVRLIDTPRDAAILAPLIEREILYRMLLGDQGPRLAQIAR 185 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + R + I+ + + S+E LAAEA MS SA H +FK+VT+ SPLQY K RL Sbjct: 186 ADGRMRQVKRAIGWIQQNFDQPFSIEDLAAEARMSPSALHRHFKAVTALSPLQYQKQIRL 245 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR +I+ + A +A VGY+SASQFSRE+ R FG P DAAR+R+ Sbjct: 246 QEARKLILVQRLDAGSAGHAVGYDSASQFSREYARLFGAPPLRDAARLRS 295 >UniRef50_A9I0Y6 Transcriptional regulator, AraC family n=72 Tax=Proteobacteria RepID=A9I0Y6_BORPD Length = 349 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 119/302 (39%), Positives = 180/302 (59%), Gaps = 2/302 (0%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73 P + + + + +L E LPD+RLL P PV+Y+PGI+I+ Sbjct: 34 PHSNPGDAPA-LRQRMVALLERLAPCEGYNLTALPDIRLLRSNRPMKNVPVLYDPGIVIV 92 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMD 133 G K GY +++ YD YL + VP+PF ET A++E PL + +++D +L++ Sbjct: 93 CQGRKRGYFGNQLYLYDDQHYLAVAVPVPFTMETDASAEEPLLAVYMHLDFKLAADLMLQ 152 Query: 134 IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG 193 I + P+ G+ S L + + RLL+ + PL+A ILG ++REI ++ LTG Sbjct: 153 IDQLGGTAPARP-RGMVSTPLDRRMGESVVRLLEALGEPLEAPILGPALVREIYFHALTG 211 Query: 194 PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTST 253 G ++ A ++ Q F I+R L+RI + LSVEQLA EA MSV+ FH +FK+VT + Sbjct: 212 EQGASMRAALAMQGQFGKIARALRRIHASFHAELSVEQLAREAGMSVATFHTHFKTVTRS 271 Query: 254 SPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 SP+QYLK+ RLH+AR+ ++ +GM A+AA+ VGY+S SQFSREFKR FG +P ++ RM+ Sbjct: 272 SPVQYLKSVRLHQARLHMVRNGMTAAAASAEVGYDSPSQFSREFKRLFGRSPVQEVRRMK 331 Query: 314 AM 315 A Sbjct: 332 AE 333 >UniRef50_A1B7B0 Transcriptional regulator, AraC family n=9 Tax=Alphaproteobacteria RepID=A1B7B0_PARDP Length = 317 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 148/300 (49%), Gaps = 6/300 (2%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 +LR M+ + + L + + + + + L P +Y P + ++ Sbjct: 14 PRLRFMENDHL-APLKELIARQWQAHGR-ETPIEGLVLTSVTAPTGPIHAVYRPSLCVVA 71 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMD 133 G K + ER +RYDA + L+ ++ +P E T AT + P L +D + +LL+ Sbjct: 72 QGAKTSMLGERAYRYDAGKCLIASMEVPIRAEITRATPDRPYLAFSLALDPATISDLLL- 130 Query: 134 IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG 193 E + + A + + E+ RLL + +RP D IL + REI + +L G Sbjct: 131 --ERDGTDDAPAGAALAVHAFGPELADPLCRLLALCDRPRDIAILAPLVRREITWLLLNG 188 Query: 194 PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTST 253 P G AL + + + I+R + I + + L++ QLA A MS + FH +FK+VT+ Sbjct: 189 PMGPALRQIGLAGSPMARIARAIACIREGFADKLNIRQLADVAGMSPATFHRHFKAVTAM 248 Query: 254 SPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +P+QY K RL +AR +++ D + +GYES SQFSRE++R FG PG D +R Sbjct: 249 TPVQYQKQLRLQEARRLLLFDNADVARIGYAIGYESPSQFSREYRRLFGSPPGRDGQEIR 308 >UniRef50_A9WCQ6 AraC-type transcriptional regulator domain protein n=2 Tax=Chloroflexus RepID=A9WCQ6_CHLAA Length = 314 Score = 287 bits (734), Expect = 4e-76, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 160/307 (52%), Gaps = 5/307 (1%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPD-VRLLYGETPFARTPVMYEPGIII 72 P +R+ L + V +L + S + LP +RL Y P ++ + P + + Sbjct: 7 PSTVRETPIAGKRAALTEYVLRLFRQYESDTLELPGGLRLYYTTRPTSKRHGVSTPALCV 66 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVDILQLQELL 131 + G K + + YDA YL+ LP A + E P G+ L +D + ++ Sbjct: 67 VLQGAKEVVLGSDRYCYDAQHYLITAAALPITTRVIAASPEQPYLGIVLQLDPALVGSVI 126 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP-LDARILGKQIIREILYYV 190 + G+ + + + + L ++L A RL+ + E P +A L I+REI++ + Sbjct: 127 AEAGQ--SGLTNRSVCAFHVSPLEGKLLDAVTRLVRLAEDPPEEANFLRPLIVREIVFRL 184 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L G G L + + I + L+R+ ++ + L + ++A E MSVS+FHH+FK++ Sbjct: 185 LRGNQGDRLQQIAATGGQIQRIIKALERLRAEFDQPLRIAEMARELGMSVSSFHHHFKAI 244 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T+ +P+Q+ K RL +AR +++ +G+ AS+AA +VGY S F+R++KR+FG TP D Sbjct: 245 TTLTPVQFQKQLRLQEARRLMLSEGLDASSAAFQVGYHDPSHFTRDYKRFFGTTPLRDMK 304 Query: 311 RMRAMQG 317 R+RAM Sbjct: 305 RLRAMTA 311 >UniRef50_C6D3S9 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3S9_PAESJ Length = 323 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 81/297 (27%), Positives = 149/297 (50%), Gaps = 1/297 (0%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 ++ L ++ +E S ++P + ++ R P + P ++ G K Y+ Sbjct: 20 KKTLDQLIGMTERMTLEEGRNSTIVPFLSIVKRSRDTVRCPGVLTPSFCLILQGEKKLYL 79 Query: 83 NERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + +F Y A +Y+ + +P + AT E P GLR++ ++ ++++ + Sbjct: 80 GQDIFHYSAGDYVASLLDIPAFGQVVGATEEKPYIGLRVDFTTQEIASVVVEAEILAESK 139 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 S +L RLL ++++P +AR L + + +E+++ +L+G G + Sbjct: 140 EKDLTSAAFIGKSDANLLDIFYRLLKLIDKPKEARFLSELLKKEMIFNLLSGDFGHLFMQ 199 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 V +++ + I+ YT + +VE+LA NMS S HH FK++T+ PLQY K Sbjct: 200 KVLFGQRADGVAKAIHWIQENYTHSFTVEELAKSCNMSTSGLHHKFKAITTMGPLQYQKQ 259 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 RL +AR +++ + A+ AA+ VGYES SQF+RE++R FG P +D +R G Sbjct: 260 LRLQEARRLMLSGPVGATTAALTVGYESPSQFNREYRRLFGQPPLQDIKTLRKASGG 316 >UniRef50_A9HQ74 Putative transcriptional regulator, AraC family n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQ74_GLUDA Length = 306 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 3/292 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 L D + + +P + L E +Y + ++ G K + Sbjct: 2 SAIDHLRDLIGRHAAGR-RTPTAVPGLMLFRSEGRSVPLNCIYRSRLYLIVQGRKRVELG 60 Query: 84 ERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 F YD + YL+ TV LP A+ P L ++ D L +LL+ + + Sbjct: 61 THAFTYDDSHYLITTVDLPVSSAVIEASPHQPYLALSIDFDPAVLADLLLSVP-VGGDRG 119 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + +G+ A+L E +L + RL+ +++ P D +L + +EI Y +LTGP G L A+ Sbjct: 120 AGDEAGLAVASLDEALLDSVRRLVALLDTPGDIAVLAPLVRQEIYYRLLTGPLGVRLRAI 179 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 +H + I+RV+ + Y E ++ LA A MS + +FK+V SP+QY Sbjct: 180 AVADSHLTRIARVMAWMRTHYAEEFGIDDLARLAGMSAPSLFRHFKAVALMSPMQYRTCI 239 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL +AR ++ DG A+ A VGY+S SQFSR+++R FGV P DAAR+R Sbjct: 240 RLQEARRRLVADGDDAAEAGFAVGYDSPSQFSRDYRRMFGVPPARDAARLRG 291 >UniRef50_A6M087 AraC-type transcriptional regulator domain protein n=2 Tax=Firmicutes RepID=A6M087_CLOB8 Length = 311 Score = 286 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 98/305 (32%), Positives = 163/305 (53%), Gaps = 5/305 (1%) Query: 13 IPKKLRDMKREEIC---RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG 69 + K++ ++K ++C R LA V K ++ S +P + L+ +Y P Sbjct: 1 MEKRIYNIKNYKLCSQQRRLASLVEKFTYRDGFQSTDIPSLDLIRASNISEPLHSIYIPS 60 Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQ 128 I ++ G K + + +RYDA+ YL+ +V LP + AT + P +RL+ + Q+ Sbjct: 61 ICVIVQGAKTVILGKESYRYDASSYLVASVNLPIIGKIIEATPDQPYLCVRLSFNSDQIL 120 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 +++ + +D +P + G+ + +L A RL+ ++E + +L IREILY Sbjct: 121 DIIKESKQDFEEKPGLE-RGLTVTKGNSLLLDALLRLVSLLETTEEIPVLAPLFIREILY 179 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 VL G L +H IS+ + I N + + L +++LA E NMS S+ HH FK Sbjct: 180 RVLQDKHGYILKQFAMIGSHARAISKAINLINNNFEKPLRIDELAKEINMSSSSLHHCFK 239 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 VT+ SPLQY K RL +AR +++ + ++A+ A +VGYES SQFSRE+ R FG+ P D Sbjct: 240 KVTAMSPLQYQKQIRLQEARRLLLSEVLEAAEAGYKVGYESPSQFSREYARMFGLPPISD 299 Query: 309 AARMR 313 R++ Sbjct: 300 IKRLK 304 >UniRef50_C6CSL0 Transcriptional regulator, AraC family n=2 Tax=Paenibacillus sp. JDR-2 RepID=C6CSL0_PAESJ Length = 301 Score = 286 bits (732), Expect = 8e-76, Method: Composition-based stats. Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 3/290 (1%) Query: 30 ADKVNKLKNK-ENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 A+ +++ + + + L P + ++ I +F G K + E F Sbjct: 13 AELIDRFAGQQNGVHETPISSLFLFRQNQPTEPSHGVHSRSICFVFQGKKEVSLAEERFP 72 Query: 89 YDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 Y +EYL+ +V LP A+SE P L+L Q+ ++ + G + A Sbjct: 73 YSPDEYLVASVELPVISRILEASSERPYLALKLEFSPEQILGVMKESG-IQPRPQEHARR 131 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 G+ + + A RL+ ++E+P D +L +I+EILY +L G +L L Sbjct: 132 GLFIGQMERSLTDAIHRLVQLLEQPDDIPLLAPLLIKEILYRILQSKHGVSLEQLALEGG 191 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 I V+ I+ Y +++ ++LAA ANMSV + +FK VT+ SP+Q+ K+ RL A Sbjct: 192 GAFRIKEVIDHIKKNYEKSIRSDELAAIANMSVPTLYRHFKEVTAMSPIQFQKHLRLQAA 251 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 R +++ + + A+ A RVGYES SQFSRE+ R FG++P +D R+R Sbjct: 252 RSLLLSEPVNAADVAFRVGYESPSQFSREYARMFGLSPIQDIKRLRTFDA 301 >UniRef50_B4WDX1 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDX1_9CAUL Length = 302 Score = 286 bits (732), Expect = 9e-76, Method: Composition-based stats. Identities = 91/290 (31%), Positives = 150/290 (51%), Gaps = 5/290 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + ++ V + + +P +RL + P V YEP + ++ SG K + Sbjct: 4 SLLPEMSAIVARHAPPD-LSRSAVPGLRLYGSDAPTRMVSVGYEPMLCLVVSGGKQTILG 62 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 E V+ Y A + L+++ LP E P L +++ + L+++IG PS Sbjct: 63 ETVYSYRAGDCLVVSAELPVCGSII---EAPYRALSFDLNPATIAGLMVEIGAPAASDPS 119 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 SGI+ L +E+L RLL +++RP + ++ I RE+++ +L + + Sbjct: 120 -PPSGIHVTQLEDELLEPMARLLRLLDRPHEIAVMTPMIERELVWRLLHSRHAATVRQIG 178 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S ++ S +SR + I Y E + +E L+ A MS+S FH +F++VT+ SPLQ+ K R Sbjct: 179 SAESRLSGVSRAINWIRAHYAEPMRLEALSDLAGMSLSTFHRHFRTVTTMSPLQFQKQVR 238 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 L +AR ++ A+ VGY+S SQFSRE+ R FG+ PG DAARMR Sbjct: 239 LQQARARLLSGADGAAETGFAVGYDSPSQFSREYARQFGMPPGRDAARMR 288 >UniRef50_A8APL9 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC BAA-895 RepID=A8APL9_CITK8 Length = 331 Score = 285 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 3/307 (0%) Query: 1 MLQNCAQSNCRIIPKKLRDMK-REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPF 59 ML++ + R P+ R + + + KV + + P + + P Sbjct: 1 MLRSLTMLDHRPNPQDDRLRQDTASLRHEITAKVRTYTEHQERVVCPFPGLSVAELHGPM 60 Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGL 118 +Y+P + ++ G K + + + Y+ + +LL V LP E A++E P L Sbjct: 61 PPLSYIYQPSVSLILQGEKRVTLGDTAYVYNESRFLLTAVNLPTVAEVMQASAERPFISL 120 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 L +D+ +E+L+D+ + + A G++ + + A R + + ERP D + Sbjct: 121 LLELDLSVAREVLVDMEQHGND-VGFAGEGLSLSHADRFLFDAILRYITLAERPQDKGYI 179 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 G I REILY +LT P G L V + IS + + Y++ L +E LA A M Sbjct: 180 GNLIQREILYRILTSPAGMTLRETVLTGSSSQRISSAINWLRTHYSQPLKMEDLAGIAGM 239 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 VS HH+F+ +T+ SPLQY K RLH+AR +++ D + AS AA+RVGYES SQF RE+K Sbjct: 240 GVSTLHHHFRRMTNMSPLQYQKQLRLHEARRLLLSDNVDASTAAIRVGYESVSQFHREYK 299 Query: 299 RYFGVTP 305 R FG+TP Sbjct: 300 RLFGITP 306 >UniRef50_B8JHL7 Transcriptional regulator, AraC family n=5 Tax=Proteobacteria RepID=B8JHL7_ANAD2 Length = 311 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 2/306 (0%) Query: 13 IPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIII 72 +P + I LA + + S + D+ E P EP +++ Sbjct: 1 MPSDQTGTSLDAIRAALARTIGRWTEGVEDRSTPIADLLFFRREGPTPPGICRVEPSVVL 60 Query: 73 LFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELL 131 + G K + + YD + +L+ ++ +P + A+ + P GL L +D+ L EL+ Sbjct: 61 VVQGKKRMLAGDDAYAYDRDHFLIASLDVPASSQVLEASPKRPCLGLTLKLDLRLLAELV 120 Query: 132 MDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVL 191 + + AA G+ ++ +L A RL D+++ P +L + RE+ Y +L Sbjct: 121 PQVH-LAAREERSAAKGMALGAVTPPLLDAFMRLTDLLDEPDAIDVLAPLVRRELHYRLL 179 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 T G L + S + I+R ++ ++ Y L + +LAA +MS S+ H +F+ +T Sbjct: 180 TSDQAGRLRQIASVGSQSHAIARAIEWLKVNYAAPLRIAELAARVHMSPSSLHQHFRQLT 239 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + SPLQY K RL++AR +++++G A+ AA +VGYES SQFSRE+ R FG P Sbjct: 240 AMSPLQYQKWLRLNEARRVMLNEGFDAAGAAFKVGYESPSQFSREYARLFGAPPRRHVVS 299 Query: 312 MRAMQG 317 +R+ Sbjct: 300 LRSKAA 305 >UniRef50_C3KMN9 Transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3KMN9_RHISN Length = 321 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 85/291 (29%), Positives = 142/291 (48%), Gaps = 1/291 (0%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 + + + D++ +L +P + L P +YEP + ++ G K Sbjct: 16 ETAPLRARILDELAQLPWDGLRYGHAVPGLSLYRVVEPAGPFSAVYEPSLSLIIQGSKRV 75 Query: 81 YINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 ++ + YD + + L + LP + A+ + P L +D+ +L+ ++ D Sbjct: 76 HVGSQTLVYDESCFFLTALGLPATGQICEASLDEPYVAASLRLDLEKLRRIIADHDLHPT 135 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 P G+ + + A RL+ + P D L I EILY +LTG G L Sbjct: 136 DTPERDLVGVAVGAATPLLFDAFLRLISLANAPGDIPFLANHIHNEILYRLLTGEQGARL 195 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 T+ + ++R + ++ YT L VE+LA ANM VS HH+F+++T+ SPLQ+ Sbjct: 196 RRFALAGTNSNRVARAVAWLKENYTRPLRVEELAEIANMGVSTLHHHFRAMTAMSPLQFQ 255 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K+ RLH A +++ + A+ AA+RVGYES +QFSRE++R FG P D Sbjct: 256 KHLRLHHAGELMLSQSLDAATAALRVGYESPTQFSREYRRAFGHPPLRDIK 306 >UniRef50_A0NVI5 Transcriptional Regulator, AraC family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVI5_9RHOB Length = 298 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 3/293 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M +E+ R L + + + L+ P PV+Y P ++ G K Sbjct: 1 MPPDELIRKLVAFADDHGAGGDPFPVGAGSMTLVRQRQPTLIYPVVYRPIFCLVLQGEKQ 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 Y+ + R+ A + L++ + LP + A+ P L L +D+ ++EL ++I D Sbjct: 61 TYLGSQTVRFGAMQSLIVGLDLPAQARVVSASRTEPYVALALPLDMALIRELALEI--DR 118 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + S A+ + S I+ A RL ++ + P ++L ++REI Y++LT G Sbjct: 119 PGKSSPASGAVASGRADAAIVDAMRRLFELSQMPEAGKVLLPLLLREIHYWLLTAKHGAI 178 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L + + +H + I+RV+ I +L V+ LA +A MSVSAFH +FK +T TSPLQ+ Sbjct: 179 LRQVAEQDSHAARIARVIAGIRRDIAASLRVDDLAGDAGMSVSAFHAHFKELTGTSPLQF 238 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 K RL +AR ++ + + S AA +VGYES +QFSRE+ R+FG+ P D A+ Sbjct: 239 QKQLRLMEARRLLQAEKLSVSRAAFQVGYESPTQFSREYSRHFGLPPRADKAQ 291 >UniRef50_Q4ZQJ7 Helix-turn-helix, AraC type:AraC-type transcriptional regulator, N-terminal n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZQJ7_PSEU2 Length = 295 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 105/294 (35%), Positives = 153/294 (52%), Gaps = 9/294 (3%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E+ L V + ++ LP V ++ E + +Y+P + ++ G K Sbjct: 1 MEKSLAELRCIVMR--AQDKWTDTGLPRVSMVRAEACADQ---VYQPMLHLVLQGTKTLS 55 Query: 82 INERVFRYDANEYLLLTVPLPFECETYAT-SEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I E RY A Y L+ V +P + +A + P + L +D + LLM G Sbjct: 56 IGEDASRYTAGHYFLVPVDVPATGQIHADTPDKPYLAVSLTLDPEVIATLLMAEGRAPEA 115 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + G+ +E++ A R+L +M+RP +A IL I REIL+ L GP GG L Sbjct: 116 PQNACFEGVI---APDEMIDAWLRMLRLMDRPHEAAILAPMIEREILFRALQGPLGGILR 172 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 + + I RV + I YTE VE LA A+MSV+AF+ +FKSVT+ SP+QY K Sbjct: 173 DVARPDGRLTQIRRVTQWIGEHYTEPFRVEPLAQMADMSVAAFYRHFKSVTAMSPIQYQK 232 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL KAR +++ D + A++ A VGYESASQF+RE+ R FG+ P DAAR R Sbjct: 233 RLRLLKARWLLLFDTLDATSIAYAVGYESASQFNREYARLFGLPPARDAARFRT 286 >UniRef50_B0KFF0 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=B0KFF0_PSEPG Length = 321 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 8/314 (2%) Query: 1 MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFA 60 M+ A + +P + L + L + + D+ + P Sbjct: 1 MIGTFAMAISAPLPSSTNPLGT------LCRVIGALAPTAGDFATSIADLSVYRRNAPAP 54 Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLR 119 + EP I+++ G K I VF YD +L+ ++ +P T A+ P GL Sbjct: 55 PITCIIEPSIVLVVQGAKEMVIGSDVFPYDRTRFLVTSLNIPAHSAVTMASDAAPCLGLV 114 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 +D+ L EL+ G + S LS ++ + RL+ ++E P +L Sbjct: 115 FKLDLRTLSELIAQDGRLPLNGQAFHTSA-GVGKLSSKLFESFARLIQLLEEPDAIPVLW 173 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 I REI Y +L L + S + I++ + ++ Y L V++LA+ M Sbjct: 174 PLIQREIHYRLLLSDQAPLLRHIASVGSKGHRIAKAIDWMKLNYAAPLRVDELASRVQMG 233 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 +S FH +F+ +T+ SPLQY K RL++A+ +++++ + A+ AA +VGYES SQFSRE+ R Sbjct: 234 LSTFHQHFRQLTAMSPLQYQKWLRLNEAKRLMLNEHLDAATAAFKVGYESPSQFSREYGR 293 Query: 300 YFGVTPGEDAARMR 313 FG+ P D +R Sbjct: 294 QFGMPPKRDIVELR 307 >UniRef50_A6W3U9 AraC-type transcriptional regulator domain protein n=4 Tax=Proteobacteria RepID=A6W3U9_MARMS Length = 336 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 92/299 (30%), Positives = 134/299 (44%), Gaps = 5/299 (1%) Query: 21 KREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIG 80 L V K +P + +L P P +Y+P I ++ G K Sbjct: 28 DMNHPLEKLKSLVEKRATS-LLTQTQIPRLDILRVCQPTELFPEIYQPLISLILQGSKRI 86 Query: 81 YINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 I ++V Y A + + +V LP E ++ P LRL++D + E+ + E + Sbjct: 87 VIGDQVVDYRAGQSFITSVELPVIGEVVESSPASPYLALRLSLDRALVTEI---LCEMDS 143 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 G +SE++ A R++ + + P D ++ I REILY +L GP G L Sbjct: 144 PLSLSETRGFCIDQVSEDLADAWYRMIRLTDHPEDIDLIAPLIEREILYRMLRGPQGAVL 203 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 + F I + I Y VE+LAA NMS SAFH FK+ SPLQY Sbjct: 204 RQIAGIDDRFFQIRNAITWIRKHYATAFRVEELAATVNMSPSAFHRRFKATVGLSPLQYQ 263 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 K RL++AR M+ + + A+ VGYES SQFSRE+ R FG P D +R Sbjct: 264 KQIRLYEARRMLFTELGGVTTVALSVGYESLSQFSREYSRLFGAPPARDIRTLRRDAQG 322 >UniRef50_C3MHY3 Putative transcriptional regulator, AraC family n=1 Tax=Rhizobium sp. NGR234 RepID=C3MHY3_RHISN Length = 313 Score = 284 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 90/298 (30%), Positives = 163/298 (54%), Gaps = 3/298 (1%) Query: 17 LRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 + DM+R + + + + ++ + ++P + + + Y+P + I+ G Sbjct: 1 MSDMQRTP-RQEMIEIIARIAEVDGDHPTIVPGLSIHRHSSSAKPNCAAYKPSLAIIVQG 59 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG 135 K + +F Y A++YLL ++ LP + A+++ P + +D ++ LL +G Sbjct: 60 AKRVLLGGELFVYGASDYLLTSIDLPVFSQISLASADEPYLSMNFQIDTTKIPALLDRLG 119 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 E P+ ++ G+ TL+ ++ AA RLL +++R + IL I +EILY +L GP Sbjct: 120 EQPAASPA-SSRGMTVNTLTADLEDAALRLLRLLDRHAEMPILLPLIEQEILYRLLVGPH 178 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L + + ++ I R + ++ Y+ L ++ LA+ +MSVS+ HH+FK++T+ SP Sbjct: 179 GARLRQMTTAESQPHQIGRAVAWLKEHYSRPLRIDDLASRVSMSVSSLHHHFKAITAMSP 238 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LQY K RL +AR +++ + + A A +VGY+S SQFSRE+ R+FG P D R+R Sbjct: 239 LQYQKQLRLQEARRLMLEERLDAGDAGHQVGYDSQSQFSREYARHFGEPPMRDIGRVR 296 >UniRef50_Q15PL3 Transcriptional regulator, AraC family n=3 Tax=Alteromonadales RepID=Q15PL3_PSEA6 Length = 296 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 103/271 (38%), Positives = 154/271 (56%), Gaps = 3/271 (1%) Query: 40 ENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTV 99 E + L VR R P++Y+ GIII+ G K+ + + +Y A +YL+L V Sbjct: 21 EGHVETALSGVRFFRASKGSPRQPLVYQSGIIIVVQGRKVIHFPDHHIQYGAGDYLVLGV 80 Query: 100 PLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL---SE 156 P+P ECE + + +P+ GL ++V L +L+ + + + + S S I+ A Sbjct: 81 PMPLECEAFVDNGLPIMGLSIDVKPALLHQLVNHMQQHQRYTQSEPCSQISCAQAAKVDA 140 Query: 157 EILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVL 216 + +RLL V+ P++ I G +++E++Y VL GP G L L H++ ++R L Sbjct: 141 PLEHTIQRLLAVLANPVETDIFGADVVKELVYRVLCGPQGKTLFGLAQHDGHYARVARAL 200 Query: 217 KRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM 276 + Y ++VE LA + NMSVSAFH FK VT SPLQYLK RL KA+ +I +G Sbjct: 201 ASLHANYASPITVETLADDVNMSVSAFHRAFKQVTFESPLQYLKKVRLVKAKDLITANGS 260 Query: 277 KASAAAMRVGYESASQFSREFKRYFGVTPGE 307 +A+ AA +VGY SASQFSREFKR+F +P E Sbjct: 261 RANEAAFQVGYTSASQFSREFKRHFNQSPSE 291 >UniRef50_A9B3B5 Transcriptional regulator, AraC family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B3B5_HERA2 Length = 312 Score = 283 bits (724), Expect = 6e-75, Method: Composition-based stats. Identities = 90/308 (29%), Positives = 160/308 (51%), Gaps = 3/308 (0%) Query: 12 IIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFAR-TPVMYEPGI 70 + P + + R LA + + + P + P R P +Y+P I Sbjct: 6 LAPTRETEPLLGPERRYLAQLLAQHAPHDGRFDLAFPRTYAIRESKPHQRSLPALYQPSI 65 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQE 129 ++ G K + ++ + YD L++ V LP + T A++ P +L D ++ E Sbjct: 66 CLVAQGAKQLVLGDQTYNYDTEHVLIVAVDLPVAAQITQASAAEPYLCFKLEFDPQRVAE 125 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 L + + P+ I++ + +++ AA RLLD++ +P + +L +I E++ Sbjct: 126 LALKVYSQGVPAPTQL-RAISTERTNRQLVQAASRLLDLLSQPDEVELLAPLVIDEMIIR 184 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 +L P GG L + + + +++ + + + + L VE+LA ANMSVSAFH +FK+ Sbjct: 185 LLRSPFGGRLAQIGQTTSRVTPVAQAIGWLRRHFAQPLRVEELATLANMSVSAFHLHFKA 244 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 VT+ SP+Q+ K RLH+AR +++ ++ + + +VGY S SQFSRE++RYFG +P ED Sbjct: 245 VTALSPIQFQKTLRLHEARRLLVATALEIGSISQQVGYASLSQFSREYRRYFGCSPTEDL 304 Query: 310 ARMRAMQG 317 AR+R Sbjct: 305 ARLRRSSA 312 >UniRef50_UPI0001744B11 AraC-type transcriptional regulator domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B11 Length = 302 Score = 283 bits (724), Expect = 7e-75, Method: Composition-based stats. Identities = 130/288 (45%), Positives = 174/288 (60%), Gaps = 2/288 (0%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L +++L + LP+VR + +P++Y+P I+I+ G K G + R Sbjct: 12 RLIALLSELAAGQGFSDSRLPEVRFMRSTQHVPNSPIVYDPSIVIIAQGRKTGTFDGRKI 71 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 YD + YL+L VPLPFECET + PL G+ + V + ELL+ + +A Sbjct: 72 IYDPSHYLVLAVPLPFECETEGSLGEPLLGVSIAVKPATVAELLLQM--TFIRDEDVAPH 129 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 I+SA L E + A RLL+ + DARILG Q +RE++Y VL GP G L L + + Sbjct: 130 AIDSAGLDEALSEATVRLLESLRTEEDARILGPQRVREVVYRVLQGPLGHCLRLLAAPDS 189 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 HF ISRVL R+ YT+N V LA EA MSVS FH +FK+VTS+SPLQYLKN RLHKA Sbjct: 190 HFGQISRVLNRLHLDYTQNHDVTFLAQEAGMSVSTFHAHFKAVTSSSPLQYLKNIRLHKA 249 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 R +++H+G A AA++VGYESASQFSREFKR FG P +A R+R Sbjct: 250 RQLMVHEGANAGVAALQVGYESASQFSREFKRLFGEGPAAEAERLRKA 297 >UniRef50_Q1QSH7 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1QSH7_CHRSD Length = 322 Score = 282 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 94/307 (30%), Positives = 162/307 (52%), Gaps = 7/307 (2%) Query: 16 KLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART--PVMYEPGIIIL 73 + D + ++ L+ ++ K +E +P + L+ + +Y+P + ++ Sbjct: 9 ETPDDEIVQLADTLSRRIQKWAPEEGLTPTAVPGLELVRANSSLTNCIGSTVYDPSLCLI 68 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLM 132 G K ++ +R Y ++ V LP + T A++E P GL+L VD ++ +L++ Sbjct: 69 AQGSKRIWLGDREIDYGPLSCMVSAVHLPVLGKITEASAERPYLGLKLAVDAQEVTDLVL 128 Query: 133 DIGE----DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 ++GE E + A G+ + ++ A RL+ +++ P D RIL + REI Y Sbjct: 129 ELGEGLSEMEERGCAETACGLGRVQAEKGLVEAMLRLVSLLDSPQDIRILAPLVRREIFY 188 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 L G G + T IS+V+ +++++TE L V +LA NMS S+ H+FK Sbjct: 189 RALVGEIGLHMRKFAVADTQTHRISKVIAVLKDRFTEPLRVRELADMVNMSESSLFHSFK 248 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 VT SP+Q+ K RLH+AR +++ +GM+A+ A+ RVGY S S FSRE+ R FGV P D Sbjct: 249 QVTRMSPVQFQKKLRLHEARRLMLAEGMEAATASFRVGYGSPSHFSREYSRLFGVPPRTD 308 Query: 309 AARMRAM 315 +++R Sbjct: 309 VSKLRGE 315 >UniRef50_A5INH3 Transcriptional regulator, AraC family n=5 Tax=Thermotogaceae RepID=A5INH3_THEP1 Length = 299 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 160/295 (54%), Gaps = 7/295 (2%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + R L +++ L K+ + LP + + E+P + + P I I G K Sbjct: 2 DEFDHTRRKLIERILHLTEKQ-PVVRPLPGLTVGRRESPTEPSTYILPPSICIAVQGAKR 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 I E + YD +LL + +P + A+ E P G+ +D+ L E++++ + Sbjct: 61 VLIGEEYYVYDVENFLLNSFDIPVIAQVIEASKEKPYIGITWEIDMEILMEIVVE--QKL 118 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + +P ++ G + ++ ++L A +R+LD+++ P L I +EI+Y +L G Sbjct: 119 NTRPIASSRGTSLGKVTYQLLDAFKRMLDLLDEPEHISALLPVIKKEIIYRLLVSEQGSK 178 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L+ + + + L ++ ++E +++++LA MSVS F+ NFK++T +PLQY Sbjct: 179 LIQIALSGKND--VIAALNYLKEHFSEPVNMKKLAEMVGMSVSTFYQNFKTLTGMTPLQY 236 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K RL +AR +++ G + AA +VGYES SQFSRE+KR+FGV+P +DA R+R Sbjct: 237 QKKLRLCEARKLLMA-GHDVTTAAYQVGYESLSQFSREYKRFFGVSPSQDAKRLR 290 >UniRef50_C8SHN4 Transcriptional regulator, AraC family n=2 Tax=Mesorhizobium RepID=C8SHN4_9RHIZ Length = 297 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 8/292 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 EE + L + + +P V + E + P + +P + + G K Sbjct: 1 MEEALQELIVIAGRYAHGR-RTKTAIPRVSIGRSEIATSPLPELCQPTALFVLQGTKTVL 59 Query: 82 INERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I +R Y A Y + V P + A+S P + +DI + L++D Sbjct: 60 IGDRTLFYGAGSYFVYAVETPATSQLIEASSARPYVAVAFALDIELIATLIVDH------ 113 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 +P++ + +E+L A R+L +++RP + +L + REI + +L GP G L Sbjct: 114 KPALDGDSFVTNRADDELLDAWRRMLRLLDRPAEIPVLAPMLEREIAFRLLQGPQGAKLR 173 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 L S I R I + Y E + V +LA A+MS ++FH +FK+ T+ SP+QY K Sbjct: 174 QLARADGRLSQIRRATAWIRSHYNEPIDVTELAELAHMSNASFHRHFKAATAMSPIQYQK 233 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 RL +AR ++I + A+ A VGYESASQFSRE+ R+FG+ P DAAR+ Sbjct: 234 QVRLLEARHLLIAESGNATRVAFAVGYESASQFSREYARHFGLPPARDAARL 285 >UniRef50_C0VLQ6 AraC-type DNA-binding domain-containing protein n=2 Tax=Acinetobacter RepID=C0VLQ6_9GAMM Length = 291 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 100/281 (35%), Positives = 158/281 (56%), Gaps = 2/281 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 ++L KL KE + + + L+ + V+ EP ++ + G K GYI Sbjct: 5 QILISLFLKLIAKEGFFATAIDGITLMRVDHNTPPLAVLQEPTLVFVLQGSKRGYIGTET 64 Query: 87 FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 + + E L+++V +PF+C+T A+ E+P+ + + ++ + ELL E+ + Sbjct: 65 YAFQQGECLIVSVSMPFDCDTVASPELPMIAMIMKLEADTVNELLAKTY-LENDKFKPLT 123 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 +G++ E I RLL + D+ ILG+QI RE+LY V+ AL LV + Sbjct: 124 TGMSVIQYDETISNVLIRLLKTLSSEQDSLILGEQIKRELLYRVIQHSGADALTGLVVQG 183 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + I ++ + I++ +TE L+VE LA +ANMS+SAFH FK VT SPLQYLK RLHK Sbjct: 184 -NLRQIYKICEYIQHHFTEKLTVEMLAEQANMSISAFHKAFKQVTLHSPLQYLKVTRLHK 242 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 A+ M+ ++ + AA VGY+S+SQFSREFK+ FG +P + Sbjct: 243 AKQMLQNENQSVAQAAYAVGYQSSSQFSREFKKQFGFSPNQ 283 >UniRef50_A6UG08 AraC-type transcriptional regulator domain protein n=2 Tax=Sinorhizobium RepID=A6UG08_SINMW Length = 318 Score = 282 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 89/298 (29%), Positives = 147/298 (49%), Gaps = 2/298 (0%) Query: 14 PKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIIL 73 P++ + + + D+++KL S +P + L P +YEP + + Sbjct: 7 PQRNLREETAPLRAQILDRLSKLPWDGLSFEHPIPGLSLYRIIQPAGPFSSVYEPSLSFI 66 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQLQELLM 132 G K + YD + L + LP + A SE P L +D+ +++ ++ Sbjct: 67 IKGSKNVRVGNETMVYDEGCFFLTAIGLPVTGQICAASEREPYVAAALRLDMEKVRRIIA 126 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 D P G+ T + E+ A RL+ + P D L I EI+Y +LT Sbjct: 127 DHDIHPTDLPERD-LGVAVGTATCELFDALFRLISLAGAPADIPFLAGHIQNEIIYRLLT 185 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 G G L T+ + +++ + ++ YT+ L VE+LA ANM VS HH+F+++T+ Sbjct: 186 GEQGARLRRFALAGTNSNRVAKAVAWLKENYTKQLRVEELAEIANMGVSTLHHHFRAMTA 245 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 SPLQ+ K+ RLH AR +++ + A+ AA+RVGYES +QF+RE++R FG P D Sbjct: 246 MSPLQFQKHLRLHHARELMLSQSLDAATAALRVGYESPTQFNREYRRAFGHPPLRDIR 303 >UniRef50_A6GLD5 Transcriptional regulator, AraC family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GLD5_9BURK Length = 290 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 118/287 (41%), Positives = 173/287 (60%), Gaps = 4/287 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + +L E L V + AR P +YEP I+I+ G K G+ + ++ Sbjct: 1 MVAITQQLATTEGYSESALSGVTFMRCNGALARMPALYEPSIVIVIQGTKHGFHDGNIYT 60 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 YDAN YL+++VPLPF+ ET AT+E PL GL + VD ELL+D+ E Q A Sbjct: 61 YDANHYLVVSVPLPFDVETQATAEKPLLGLIIRVDFEMAAELLLDLKESVVDQ-GEAVPP 119 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 + ++ + ++ + RLL++++ P ++R+LG +I+EI Y VLTG G +L S ++ Sbjct: 120 LFASRMDAKLGDSVFRLLEILQSPTESRVLGSSVIKEITYRVLTGEQGRSLRLAFSSDSY 179 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 S +++VLK I + Y L V LA EANMSV FH +FKSVTS++P+QY+K RLH+AR Sbjct: 180 LSRVAKVLKLIHSNYHCALDVATLAQEANMSVPTFHAHFKSVTSSTPIQYIKAIRLHQAR 239 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP---GEDAARM 312 +M+I G+ A+ + VGYES SQFSREFKRYFG TP + + + Sbjct: 240 LMMIRKGISAAQVSAMVGYESPSQFSREFKRYFGRTPVQESQYSQSI 286 >UniRef50_Q30WL5 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30WL5_DESDG Length = 294 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 112/290 (38%), Positives = 173/290 (59%), Gaps = 4/290 (1%) Query: 29 LADKVNKLKNKEN-SLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 + ++++ + + LP VR AR P++Y PGI I+ SGHK+ Y+ + F Sbjct: 4 MVKLLDEIAGVDGGVVESRLPGVRFFKETRHVARRPMLYNPGICIVVSGHKVAYVGGQTF 63 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA-- 145 RYD + YL+ +V +PFECE++ + E PL G+ +++DI QL L+ + ++ +++ Sbjct: 64 RYDVDNYLVTSVAMPFECESFPSQENPLLGMFIDIDIGQLNNLISMMERQDNPSVAVSNG 123 Query: 146 -ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 I + + ++ AA +L+ ++ +ARILG ++RE+ Y L G L +LV Sbjct: 124 RQLAIGPSAMDADMKDAAVKLVKALQSEQEARILGPGLVREVYYRALCGNQAPVLYSLVR 183 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 FS ++R++ +E Y+E ++QLA +MSVSAFH FK +T+ SPLQYLK RL Sbjct: 184 GSGSFSQVARIIHMMEGSYSEKFDIQQLADSVHMSVSAFHKAFKDITADSPLQYLKKIRL 243 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +AR +I+ GMKA AA VGYES SQFSREFKRYFG +P E +R+ Sbjct: 244 SRARDLIVQQGMKAYLAADEVGYESPSQFSREFKRYFGRSPAELMRDVRS 293 >UniRef50_A6W3U1 AraC-type transcriptional regulator domain protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W3U1_MARMS Length = 297 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 112/283 (39%), Positives = 179/283 (63%), Gaps = 1/283 (0%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 L D + L +++ L+ +VRL+ R P++Y PG+ I+ G KIGY+ +R Sbjct: 11 LVDLIKPLVSEDGFCDTLIANVRLMKCAKSLPRMPLIYRPGLTIIVQGQKIGYLGDREIH 70 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 Y++ YL+ T+PLPFECET+A+ + PL G+ +++D + L EL+ + +E S++ Sbjct: 71 YNSGHYLVQTLPLPFECETFASQQEPLLGVSIDIDPVLLSELIS-VPYEEKLNQSISYFP 129 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 ++S +S+E++ + RL+ + P A+I+G+ +RE+++ L P G AL ALV Q Sbjct: 130 MSSVPMSDEMVESVSRLIKALHDPYTAKIMGQSRVREVIFEALQSPQGDALRALVLNQGR 189 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 FSLI LK++ + + + VEQLA +ANMSVS+FHH+FK++ +SPLQYLK RL KA+ Sbjct: 190 FSLIVNSLKQLHLQLDQEVRVEQLAEDANMSVSSFHHHFKNIAGSSPLQYLKRLRLLKAQ 249 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 M++ + S ++ VGY+S QFSR++KRYFG P +D R Sbjct: 250 MLLNQGHLNVSQISLEVGYKSVHQFSRDYKRYFGAPPTKDKLR 292 >UniRef50_C0N265 AraC-type transcriptional regulator N-terminus domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N265_9GAMM Length = 302 Score = 280 bits (717), Expect = 4e-74, Method: Composition-based stats. Identities = 85/303 (28%), Positives = 149/303 (49%), Gaps = 6/303 (1%) Query: 13 IPKKLRDMKREEI--CRLLADKVNKLKNKENSLSGLLPDVRLLY-GETPFARTPVMYEPG 69 +PK+ K E+ LA +++ + + P VR+L + +PG Sbjct: 1 MPKQNHQDKNNELMLRNKLAKLISQYAPADGLFE-VCPGVRVLRESSQDAKPARNISQPG 59 Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQ 128 + I+ G K + +F YD + ++ + +P A+ + P L +++ +L Sbjct: 60 MCIVAQGAKRVVLGNDIFEYDNSRMVVYSTEVPISANIIRASIDEPYLCLIIDITPQKLA 119 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 EL + I+ + +I+ A RLL++ P D +L ++ EI Sbjct: 120 ELTAKAFPH-GLPRVPESRAIHIGPTNPKIVDAGIRLLELFSEPDDVDLLIPLVLDEIFI 178 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 +L G + + ++ +S+ + + Y + + V+QLAA NMSVSAFH +FK Sbjct: 179 RLLRSHIGALVAQIGITDSNLQKVSKGISWVREHYAQPMKVDQLAAHVNMSVSAFHQHFK 238 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 +VT+ SPLQ+ K RLH+A+ +++ M S+A+++VGY S SQFSRE+ R FGV+P +D Sbjct: 239 AVTTMSPLQFQKELRLHEAKNLMLSKMMDVSSASLQVGYASVSQFSREYSRLFGVSPSKD 298 Query: 309 AAR 311 Sbjct: 299 TRS 301 >UniRef50_Q08YF3 Transcriptional regulator, AraC family n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08YF3_STIAU Length = 336 Score = 280 bits (716), Expect = 5e-74, Method: Composition-based stats. Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 3/298 (1%) Query: 18 RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGH 77 D +E+ L + + + + ++P + L+ P M +P ++ G Sbjct: 31 SDADTQELLARLTAQFLRRTPSDGETTTIVPGLTLMRLSGPTVVQRGMLKPSFCVVAQGE 90 Query: 78 KIGYIN-ERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG 135 KIG + RY A ++L ++ +P + +A+ P + + +L D Sbjct: 91 KIGQAGADTTIRYSAGQFLASSINMPVAGQVLHASKARPYLAAVFELCPADVLSVLADAK 150 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + T +L R + ++ +AR + RE++Y ++TGP Sbjct: 151 IQVDATAPCCPATF-VGTADARLLDVVLRSVSSLDDEREARFFAPLLRRELIYRLVTGPS 209 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 A+ + + R ++ I+ + + L +++LA NMS S+ HH FK+ P Sbjct: 210 AFAVAQSALQSRPDDGVGRAVEWIKTHFAQPLVIDELAKHVNMSTSSLHHKFKATVMMGP 269 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LQY K RL +AR +++ A+ AA VGYES SQF RE++R FG +P D RMR Sbjct: 270 LQYQKRLRLEEARRLLLSGLADATRAAFDVGYESPSQFIREYRRLFGTSPMRDVKRMR 327 >UniRef50_B9JBG2 Transcriptional regulator protein n=2 Tax=Proteobacteria RepID=B9JBG2_AGRRK Length = 333 Score = 279 bits (714), Expect = 8e-74, Method: Composition-based stats. Identities = 87/298 (29%), Positives = 145/298 (48%), Gaps = 4/298 (1%) Query: 18 RDMKREEICRLLADKVNKLKNKE-NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 M + L + + + ++ P ++Y P + ++ G Sbjct: 34 PPMSSA-LKDALTHFIESSDGGDNGVFWTGIDGFCVMRSSEPKMPHKMIYRPALCVIVQG 92 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIG 135 K +++RV Y + L++++ LP A+ E P + L D+ ++E++ + Sbjct: 93 AKQLMLHDRVIDYAEMQALIISIELPAAGRVIEASPEKPYIAISLEFDVGMMREVMEQL- 151 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + A GI LS+ + RL ++ P +L I+REI +++LTGP Sbjct: 152 DVPPKPTGGAGLGIFVEDLSQPLADCLVRLTGLLATPRAIPVLHPAIMREICFWLLTGPN 211 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 GG + LV + I+ ++ + + + E + +EQLAA A MS S+FH +FK++TS +P Sbjct: 212 GGEVCKLVLPDSQTRRIADAIRLLRDNFAEPVRIEQLAAAARMSPSSFHQHFKTLTSMTP 271 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 LQY K RL +AR +++ AA RVGYESASQFSRE+ R FG P D +R Sbjct: 272 LQYQKQMRLLEARRLMVAGSANVENAAYRVGYESASQFSREYTRMFGAPPKRDVTELR 329 >UniRef50_Q5E474 Predicted DNA-binding transcriptional regulator n=23 Tax=Gammaproteobacteria RepID=Q5E474_VIBF1 Length = 294 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 105/290 (36%), Positives = 164/290 (56%), Gaps = 5/290 (1%) Query: 22 REEICRLLADKVNKLK--NKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + L+ + + E +P V R P +Y+ GII+L GHK Sbjct: 1 MKSLGELMQSYADHCGFNDLEGIKETAIPGVWFYRSSKGNQRQPFVYQSGIIVLGKGHKN 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 YI + Y ++YL++ VP+P ECE + + PL GL ++VD L L+ ++ E + Sbjct: 61 IYIGNQPVHYGPDDYLVVGVPMPLECEAFPENGEPLLGLSIDVDSALLHRLVNELEEAKF 120 Query: 140 ---FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 Q S G+ S ++ ++L + +RL+ + LD ++LG+ ++ EI+Y VLTGP G Sbjct: 121 QPCIQTSSDGFGLTSVKMANDMLESCKRLMAALHTDLDTKMLGEALLTEIVYRVLTGPEG 180 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L L + ++ +++ + ++ Y +L+V+ LA EANMSVSAFH F+ +T SPL Sbjct: 181 HVLFNLAHHDSQYARVAKAMNKMHQSYANSLTVQNLAEEANMSVSAFHSAFRKITLESPL 240 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 QYLK RL+KA+ +I +G + + AA VGY S SQFSREFKR+F VTP Sbjct: 241 QYLKKVRLNKAKELIQLEGKRVNDAAHLVGYTSTSQFSREFKRHFNVTPK 290 >UniRef50_D2L3Y8 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L3Y8_9DELT Length = 296 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 121/287 (42%), Positives = 174/287 (60%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 L + + L +E LP V L R P +Y+PG++IL G K GY+ V Sbjct: 3 EELKEIMASLAIREGESPSALPGVTFLRHSRSQPRAPALYQPGVVILGQGRKRGYLGPEV 62 Query: 87 FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA 146 YDAN YL+L VPLP ECE A+ + P+ +RL+VD + +LL+ +G++E ++ Sbjct: 63 HAYDANNYLVLAVPLPAECEVIASPQEPMLSMRLDVDAAMVADLLLAMGDNEPRTRLLSK 122 Query: 147 SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 GI L+ ++ AA RL + PLD+R+L + +E+LY VL GG L AL +RQ Sbjct: 123 GGIAPTPLTSDVREAATRLARALASPLDSRVLAPALAKELLYRVLLDAQGGLLRALAARQ 182 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 F+ I+ +L+RI Y + ++ LA + +MS + H +FK+VT+TSP+QY+K RLHK Sbjct: 183 GDFARIADLLRRIHANYATPMEIDALANQIDMSPATLHRHFKAVTATSPMQYVKAIRLHK 242 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 ARM+++ DG + AA RVGYES SQFSRE+KR+F TP DAAR R Sbjct: 243 ARMLMVADGFGVAMAASRVGYESPSQFSREYKRFFKTTPAADAARWR 289 >UniRef50_Q021U2 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021U2_SOLUE Length = 316 Score = 276 bits (706), Expect = 7e-73, Method: Composition-based stats. Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 5/304 (1%) Query: 14 PKKLRDMKRE---EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 PK+ + E+ R+LA ++ S +P + L +P YEP + Sbjct: 4 PKQQEPDRNPALIELRRVLAARIAGHAVSGGEHSTSVPGLTLYRRISPSPCHRGSYEPSL 63 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQE 129 + G K + + D + +L+ ++ +P + + A+ +VPL + L +D+ + E Sbjct: 64 NVFAQGRKRINLGGTEYLCDGSSFLVSSIDIPVQSQIVEASEDVPLLSMLLRLDMAMVGE 123 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 +L + Q S G+ + +L A RL++ ++ P D L I REI+Y Sbjct: 124 VLSR-EDLPEPQGSSHHHGLAVGATTTGLLGACIRLMETLDTPEDIPFLSPLIQREIIYR 182 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 VL G L A+ +R ++ + ++ YT+ L +E+LA + M VS HH F++ Sbjct: 183 VLRTEQGQRLRAIATRGDLSHRTAKAIAWLKANYTKPLRMEELAEVSRMGVSTLHHQFRA 242 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +T+ SPLQY K RL AR ++ +G+ A+ AA VGYES SQFSRE+ R+FG P D Sbjct: 243 LTAMSPLQYQKQLRLQAARQRMLTEGIDATRAAYDVGYESVSQFSREYSRFFGQPPMRDI 302 Query: 310 ARMR 313 +R Sbjct: 303 RALR 306 >UniRef50_B1K2F3 Transcriptional regulator, AraC family n=7 Tax=Proteobacteria RepID=B1K2F3_BURCC Length = 299 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 152/292 (52%), Gaps = 3/292 (1%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E +A + + + + + + + L+ T P +Y P + ++ GHK + Sbjct: 2 ETLTEIASVIARHVSMDGFQATPIKRMTLVRSSTVTMPMPNVYRPQLCLVAQGHKEVTLG 61 Query: 84 ERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 +RV +Y Y ++T LP AT + P L L+ D + L +L + + Sbjct: 62 DRVLKYAPGRYGVVTYDLPATGRVVDATPDKPYLCLYLDFDPVMLADLALRVPPLPEAPS 121 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 G + +L AA RLL +++ P +LG +EILY++L GP G + + Sbjct: 122 PPV--GKTVSDAGAALLDAALRLLRLLDNPAALPVLGPLAEQEILYHLLAGPDGARMRHI 179 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 + Q + + R + + + E S+++LAAEA MS S+ H +F++VT+ +PLQ+ K Sbjct: 180 TAGQGRVAQVGRAIAWLGKHFRERFSIDRLAAEAGMSPSSLHEHFRAVTAMTPLQFQKQL 239 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL +AR +++ + + AA+RVGYES SQFSRE++R+FG +P D R+RA Sbjct: 240 RLQQARSLMLVHDIDVTTAAIRVGYESPSQFSREYRRHFGESPARDITRLRA 291 >UniRef50_B0SVQ8 Transcriptional regulator, AraC family n=8 Tax=cellular organisms RepID=B0SVQ8_CAUSK Length = 323 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 151/292 (51%), Gaps = 8/292 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E+ L + + +P + ++ G P +YEP I ++ G K Sbjct: 1 MEKALEELRRLAAR--AENRRTETGIPRLAMVRGAIPEHELAAVYEPMINLILQGSKSMT 58 Query: 82 INERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I + RYD Y +++V LP + A++ P + L ++ + +L Sbjct: 59 IGGQTLRYDPATYFVMSVDLPAIGAVHSASTGEPYLAVSLTLEPSVIAAILDLAQPSAG- 117 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 SG + AT++ E+L A RL+ +MERPLD +LG RE+LY VL GP G L Sbjct: 118 ----QGSGFSVATVTPELLDAWVRLMGLMERPLDIAVLGPGYEREVLYRVLQGPQGWMLR 173 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 + + T S I ++ I + + L +E LA + MSVSAFH FK+VT+ SPLQ+ K Sbjct: 174 DIATPDTALSRIHAAVRWIRENFNKPLRIEDLARQVAMSVSAFHRQFKTVTNMSPLQFQK 233 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 RL +AR ++ + + A+A A RVGYESASQFSRE+ R FG +P DAA + Sbjct: 234 TIRLMQARRLMTTEALGAAAVATRVGYESASQFSREYARLFGRSPARDAAAL 285 >UniRef50_C9P783 AraC-type DNA-binding domain-containing protein n=3 Tax=Vibrionaceae RepID=C9P783_VIBME Length = 302 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 101/290 (34%), Positives = 160/290 (55%), Gaps = 4/290 (1%) Query: 21 KREEICRLLADKVNKLKNK--ENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK 78 ++ ++ +L+ + V+K E +P V +R P +Y+ GI+IL G K Sbjct: 7 EKPDLAQLMQNYVDKYALHHLEGCTDTAIPGVWFYRSSQGNSRQPFIYQSGIVILGQGQK 66 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 ++ Y N+YL++ VP+P ECE A PL GL +++D L + + + E+ Sbjct: 67 RIHLGANAVDYGPNDYLVVGVPMPLECEAVAKQNQPLLGLTIDIDHSLLLKQVAALEENG 126 Query: 139 HFQPSMA--ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 P A G+ S ++ +L + +RL++ + L+A +LG ++ E+ + LT G Sbjct: 127 FKPPVDANNPCGLKSVQMNHTMLNSCKRLMNALIDGLEAELLGGSLLEEMAFRALTSLEG 186 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L L + H++ I++ L ++ Y +L+V LA EANMSVSAFH F+ VT SPL Sbjct: 187 HVLFELAHHEGHYARIAKALSKVHRDYATSLTVNTLAEEANMSVSAFHQAFRGVTMESPL 246 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 QYLK RL+KA+ +I +G + + AA VGY S SQFSRE+KR+F TP Sbjct: 247 QYLKKVRLNKAKELIQIEGKRVNDAARLVGYSSPSQFSREYKRHFNHTPR 296 >UniRef50_Q089X8 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=Q089X8_SHEFN Length = 289 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 105/283 (37%), Positives = 162/283 (57%), Gaps = 3/283 (1%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 +A + +L KE L V + AR P+ Y G++I+ G K Y++ + F Sbjct: 3 EIATLMAQLAPKEGVNDTHLSGVHVFRSSQYGARGPMCYSQGVLIVGQGKKRVYLDNQTF 62 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ---ELLMDIGEDEHFQPSM 144 YD L++TVPLP ECET+A+ E P+ L +++D++QL L+ + + Sbjct: 63 EYDRQHSLVMTVPLPVECETFASIEEPVLVLMVDIDLVQLNYIIRLMDEHHQIPKDLNES 122 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 SG A +E++ C RLL ++ PL+A+++G+ ++ E+LY +L P L AL Sbjct: 123 RQSGFFVADNTEDMDCCVIRLLQALQSPLEAKVMGEALVLELLYRLLDSPDAAPLYALSL 182 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 T S + + L I Y E++ V+ LA+ NMS SAFH +FK VT++SP+QYLK RL Sbjct: 183 SHTRLSRVEKALNYIHKHYGESVEVDTLASLVNMSPSAFHRSFKEVTASSPIQYLKKIRL 242 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 +KA+ ++ +K + +VGYES +QFSREFKRYF +PGE Sbjct: 243 NKAKALLQLQNLKVKEVSTQVGYESTAQFSREFKRYFDQSPGE 285 >UniRef50_D0I5P8 Transcriptional regulator AraC family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I5P8_VIBHO Length = 293 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 103/286 (36%), Positives = 149/286 (52%), Gaps = 5/286 (1%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 LA V + +P ++L ++P P++ +P I + K ++ Sbjct: 4 ITELARNVFEKAT--GKWQTDIPGLKLYASQSPIVLMPIVLQPSICFVLQAKKRVATGQQ 61 Query: 86 VFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 + Y A+ YL+ +V P E T P G LN+D + +L+M++ + S Sbjct: 62 AYVYSADSYLINSVTRPVEASLLDVTDSHPYVGFSLNIDQQMVGQLMMEMTRWQKEMYSA 121 Query: 145 AASGI-NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 SG SA ++ EI A RLL ++ +D IL I RE+ Y VL GP GG L V Sbjct: 122 PQSGFTQSAPITPEISNIASRLLGLLNDEMDKEILAPSICRELYYAVLKGPGGGLLRNCV 181 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 S T + I+ V+ IE + NL++E++A+ A MS S H +FK VT+ SP+QY+K+ R Sbjct: 182 SNHTGANRIAPVVHYIEQNFERNLTIEEIASVAGMSASTLHDHFKQVTTVSPMQYVKSLR 241 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 LHKAR M+ G + + VGY S SQFSREFKRYFGVTP E Sbjct: 242 LHKARSML-SVGYQVAEVCYGVGYSSPSQFSREFKRYFGVTPSEAR 286 >UniRef50_Q88K66 Transcriptional regulator, AraC family n=4 Tax=Pseudomonas putida RepID=Q88K66_PSEPK Length = 301 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 116/285 (40%), Positives = 165/285 (57%), Gaps = 1/285 (0%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 + L + L + + LLP V++L + A +P +YEP ++I+ G K+ + Sbjct: 8 DANAPLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLG 67 Query: 84 ERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ-P 142 R Y A YL+ + +PF CET+AT E PL G+ + +D L EL+ +G + Sbjct: 68 PRTLEYGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQ 127 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + + SA L + + ERLL ++ PLDA++LG +RE+LY L GP G L AL Sbjct: 128 AQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRAL 187 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 V +Q HF+ I L + Y E LSVE LAA ANMSVS FH +FK T +P+QYLK Sbjct: 188 VEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRL 247 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 RL KA+ M+I +G+ + AA RVGY+S SQFSRE+KR F +PG+ Sbjct: 248 RLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGD 292 >UniRef50_A6WBM1 AraC-type transcriptional regulator domain protein n=5 Tax=Actinomycetales RepID=A6WBM1_KINRD Length = 330 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 97/313 (30%), Positives = 156/313 (49%), Gaps = 10/313 (3%) Query: 8 SNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE 67 + R L M E+ + + + + + + V TP A M Sbjct: 20 AQERRAGGSLTGMSLAELRQ----LITRHASPA--TTTAIEGVHAARTTTPAAPAASMDG 73 Query: 68 PGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQ 126 + ++ G K +++R RY A +Y++ ++ LP + T A+ P G L + Sbjct: 74 AVLAVIAQGEKTLVLDDRELRYGAGQYVVASLDLPVTGQFTGASEAEPALGFGLALKPAL 133 Query: 127 LQELLMDIGEDEHF---QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 + ELL+ E + + A + ++L A R+L ++ERP D +L I Sbjct: 134 IAELLLHPAARELPGTGRGAAAPFALTIGDAGSDLLDAVVRMLRLLERPRDRVVLAPLIE 193 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 REIL+ ++TGP G A+ L + S ++R ++ + Y + L V++LA A MS SAF Sbjct: 194 REILWLLITGPHGEAVRQLGLADSSLSNVARAVRWLREHYAQPLRVQELAQVAAMSPSAF 253 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 H F +VTS SP+Q+ K RL +AR+ ++ D + A VGYESASQFSRE++R FG+ Sbjct: 254 HRAFAAVTSMSPIQFQKRIRLQQARLRLLTDPADVAGAGHAVGYESASQFSREYRRLFGL 313 Query: 304 TPGEDAARMRAMQ 316 PG+DA R+R Sbjct: 314 PPGQDATRLRTEA 326 >UniRef50_Q880S7 Transcriptional regulator, AraC family n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q880S7_PSESM Length = 313 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 87/303 (28%), Positives = 141/303 (46%), Gaps = 5/303 (1%) Query: 19 DMKREEICRLLADKVNKLKNKENSLS---GLLPDVRLLYGETPFARTPVMYEPGIIILFS 75 + +E + L + K+ + +PD+ + T +YEP + I+ Sbjct: 9 PAEPDERLQALKRLIGKVTPQIGLNDVCKTSIPDLTFYRMDKLATPTYCIYEPCVAIILQ 68 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLRLNVDILQLQELLMDI 134 G K E+ + + + +V +P A SE P + L +D+ L +++ Sbjct: 69 GAKEITFGEQACEFAQGSFFVTSVDIPTLARVTAASEQTPYLSIVLKLDLSMLNDVI-QT 127 Query: 135 GEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 + + A G S S E+L A RL + +PL+A ++ I REI +L Sbjct: 128 QAPLKQEATPEARGFASGMASSEMLDAFARLSALTGQPLEAGLMSDLIKREICVRLLLSC 187 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G L ++ I R ++ ++ Y E L V QLA + M+ S HHNF+ +T TS Sbjct: 188 AGQWLRSVTRDGYRDKGIVRAIEWLKLHYDEPLHVAQLAQLSGMASSTLHHNFRKLTGTS 247 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 P+QY K+ RL AR +++ + + + AA+RVGYES +QFSRE+ R FG P D R Sbjct: 248 PVQYQKSLRLQAARSLMLTERVDVNTAALRVGYESVAQFSREYARRFGAPPSRDIKYARE 307 Query: 315 MQG 317 G Sbjct: 308 AGG 310 >UniRef50_Q021L8 Transcriptional regulator, AraC family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021L8_SOLUE Length = 316 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 4/291 (1%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYI 82 + R + + ++ + ++P V L+ P + ++ G K Sbjct: 12 NSLWREARSILVRHCEEDGLFTAVIPGVHLMRFGWRSQPLVATQFPCMAMVIQGTKSVEF 71 Query: 83 NERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 E Y A +YLL ++ +P A+ PL + + +D +L+E++ + Sbjct: 72 GETNLEYGAGQYLLTSIDVPATSRIVNASKARPLLAVGVQIDFAELKEVIRR---CDAMP 128 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 GI EIL A RLL +++ P ++ L I +EILY +L+G G LL Sbjct: 129 QLNTQPGITIFDADLEILDAVVRLLRLLDTPEHSKPLAPLIRQEILYRLLSGRSGSRLLE 188 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + + + I+ V I+ + E+ VE LA MS S+FH +FK+VT +P+QY + Sbjct: 189 ICRSGSPSNRIAEVTGWIKKHFAESFLVEGLAHHVGMSPSSFHQHFKAVTGMTPIQYQRR 248 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 RL +AR ++ + + A++RVGYES SQFS+++++YFG P +D A Sbjct: 249 IRLQEARKSLLMEAINIGEASVRVGYESHSQFSKDYRQYFGRLPKDDIAAH 299 >UniRef50_C9PHT7 Transcriptional regulator AraC family n=2 Tax=Gammaproteobacteria RepID=C9PHT7_VIBFU Length = 296 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 2/297 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + L ++V +KE S +P + + TP A +Y G ++ G K Sbjct: 1 MNSNNANQALVEQVRAYSSKEGSYVTDIPGLEVHIRNTPTAPLHCIYSLGFSLILQGSKQ 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 I++R +A + +L T P T AT P + L +D + + ++ D+ Sbjct: 61 LAIDDRQVPVEAGQSMLTTFDTPIVSHVTEATRHQPFLAIVLKLDYDLIMQTCTELKLDK 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + I+ + + I RLL + + P L I +E++ +L GP G Sbjct: 121 PDRH-FEYQSISIQNMDDGIYRTMSRLLALEQEPEYLASLVPLIKKELVIRLLHGPHGTQ 179 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L + S + + I +++ ++ +TE + + +LA +A+MS S+F +FK++T +SPLQY Sbjct: 180 LRHIASVGSPSNHILKIVTWMKKNFTETVGMNELAGQAHMSASSFRVHFKALTGSSPLQY 239 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +KN RL +AR ++ +G+ A+ A+ VGYESASQFSRE+ R FG+ P +D R+R + Sbjct: 240 MKNLRLQEAREQMLLNGLDATQASNLVGYESASQFSREYSRLFGLPPQKDIQRLRQI 296 >UniRef50_A3WIM7 Probable transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM7_9GAMM Length = 309 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 96/303 (31%), Positives = 156/303 (51%), Gaps = 5/303 (1%) Query: 20 MKREEICRLLADKVNKLKN---KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSG 76 M + + R +AD +L KE+ + D+ L++ P P++Y P + + G Sbjct: 1 MSDQYLTRRMADLTQRLLPLLTKESLTQTAIDDISLMHLSNPSQVRPIIYRPAVCFMLQG 60 Query: 77 HKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG 135 K + Y+ YLL+ V P A+ + P GL N D +L+EL++ +G Sbjct: 61 AKELLVGNTKVTYEQMNYLLIPVVFPVSGRVSQASPDNPYVGLSFNFDTAELRELILLLG 120 Query: 136 EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPC 195 + + S + + E++ ER +++E+P DA++L I RE++Y +L G Sbjct: 121 DRIPAT-VKSQSSLCVGKVDSEMMQLLERATELLEKPDDAKVLFPLIRRELMYRLLLGEL 179 Query: 196 GGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 GG L T S I++ + I+ + E L V+ LA+ ++S SAF+ FKSVT+ SP Sbjct: 180 GGLLRDFNLIDTQASRIAQAIDIIKRRLHEPLRVKDLASAVHLSESAFYQAFKSVTAMSP 239 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +Q+ K RL +AR +++ +G S A +VGYES SQFSRE+ R FG +P D R Sbjct: 240 IQFQKKLRLDEARRIMLFEGSDVSTACYQVGYESPSQFSREYSRLFGQSPKADINDFRIS 299 Query: 316 QGN 318 G+ Sbjct: 300 SGS 302 >UniRef50_A9GMF7 Transcriptional regulator, AraC family n=2 Tax=Proteobacteria RepID=A9GMF7_SORC5 Length = 310 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 3/295 (1%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 + + R + D +K N + +P +R++ P +Y P + ++ G K Sbjct: 1 MDNLRRAVRDYASKHANGDGLALTKVPGLRMMCVHAPSGPLHSIYRPLVCLVLQGAKRML 60 Query: 82 INERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 + E +++T +P A+ P L + +D+ ++E+ G Sbjct: 61 VGSEERIVSRGESVIVTADMPVTGRIVQASQSEPYLALAVELDVALIREIAS--GLSSTA 118 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + A + A + E +L A RL+ ++ RP +L I RE+ Y++L+GP G L Sbjct: 119 EDGSKAPPLLVANIDEVVLDCALRLMRLLGRPEAIPLLHPGIARELHYWLLSGPHGAVLR 178 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 AL + S ++ + + +Y + V +LA A MS +AFH FK +TS +P+Q+ K Sbjct: 179 ALSLPTSSASRLAAAVAMLRAEYRTRIPVRRLAKSAGMSSTAFHVQFKRLTSLAPIQFQK 238 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 RL +AR +++H+G+ A+AAA VGYESASQFSRE+ R FG P DA R R+ Sbjct: 239 RLRLMEARRLMVHEGVSATAAAFEVGYESASQFSREYARLFGAPPKRDALRARSA 293 >UniRef50_C6BWP6 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BWP6_DESAD Length = 302 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 100/300 (33%), Positives = 174/300 (58%), Gaps = 2/300 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 ++ +++ L + ++ +E L +V L+ ++P++YE I GHKI Sbjct: 3 IQDKKLLDELKEALDDGAVREGINETFLEEVTLVRVSEHKPKSPLIYEQCFCIAVYGHKI 62 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG--ED 137 ++++ F Y +E+L++ +P + E + PL + + +D +Q+L+ I + Sbjct: 63 CHLSDATFTYGEDEFLVVPAIVPLDIEVVPDVDNPLLSITVPLDFEVIQDLVEFINKYDK 122 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGG 197 + + ++SGI L+ ++ + RLL V++ +A I GKQIIREI Y++L G G Sbjct: 123 QALEKISSSSGIYFEPLTNNVMESTIRLLKVLKSRKEANIFGKQIIREIYYHILMGKHGH 182 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 L + ++ ++LI++ L+ + + Y + + ++ LA ANMSV +F+++FK+VT+ +P+Q Sbjct: 183 LLASAAFGESDYALIAKSLRFLHDNYDKGIDIDHLAKSANMSVRSFYNHFKAVTALTPVQ 242 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 YLK RL KAR ++ G +AS+AA VGYES SQFSREFKR+FG TP E + M G Sbjct: 243 YLKRIRLEKARQFMVVQGEQASSAAHMVGYESPSQFSREFKRHFGYTPREAVRNSQGMAG 302 >UniRef50_A6FZ93 Transcriptional regulator, AraC family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZ93_9DELT Length = 301 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 91/287 (31%), Positives = 138/287 (48%), Gaps = 8/287 (2%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVF 87 L V + + + + + L P R P +Y + + G K Y+ + Sbjct: 5 RLRALVERHAGPDGLSATPIAGLSLFRVNQPVERLPAVYPASMCCVAQGSKRAYLGGVAY 64 Query: 88 RYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELL---MDIGEDEHFQPS 143 YDA+ YL + +PLP E E A+ + P+ G+ L++D + E L Sbjct: 65 TYDADHYLCVAMPLPVEAEVPVASPDEPVLGVLLDLDTPAMAETLVAYEAAARPRSASTR 124 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + G+ L A RLL++++ P+ R+L K +RE+L+ +L G G + Sbjct: 125 ALSPGLAVVEADAAFLDAVVRLLELLDNPVALRVLAKGRMRELLFTILAGQAGPLMRQSF 184 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 I+RVL I + LSV++LA A MS + FH F++ TS SPLQ++K R Sbjct: 185 ---GAAQDITRVLHHIREHLHDPLSVDELAQRAGMSRAVFHRRFRAATSFSPLQFIKALR 241 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 L A M+I G S AA VGY SASQFSREF+++FG +P A Sbjct: 242 LSHAA-MLIVGGQAVSQAADAVGYTSASQFSREFRKHFGDSPRRWAK 287 >UniRef50_A3M8D5 Transcriptional regulator AraC family n=10 Tax=Acinetobacter RepID=A3M8D5_ACIBT Length = 297 Score = 270 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M++ ++ + L + L +E + ++ L+ + V+ EP I+++ G K Sbjct: 1 MQQNDLTKSLVEAFLYLAPQEGLYPTHISNITLMRVDHSTQPVAVLQEPSIVLVIQGVKR 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG---- 135 YI + +F++ + L +++ +PF+C+T E P+ + + + + EL + Sbjct: 61 AYIGKDIFKFQQGQCLFISIAIPFDCDTLVERE-PMLAIAIKFEPQMMAELATKMDKEHR 119 Query: 136 ---EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 ED + + G+N ++ I A RLL+++ D ILG+Q+ RE++Y VL Sbjct: 120 PLIEDFDNKEIKLSCGLNIIEMNSVISDVALRLLNLLRSKQDTAILGEQVKRELIYRVLQ 179 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 + L + + +I + + I+ Y NL+V++LA +A MSVS FH FK VT+ Sbjct: 180 AGGSDFIQNLSAIMSRSGVIYTICEIIQRDYYRNLTVQELAKQAGMSVSLFHQAFKKVTN 239 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 SPLQY+K RLHKAR +I+++ M + AA VGY SASQFSREFKR FGV P Sbjct: 240 YSPLQYIKITRLHKARDLILNNQMGVAEAAYEVGYVSASQFSREFKRLFGVPPK 293 >UniRef50_A3QEE9 Transcriptional regulator, AraC family n=1 Tax=Shewanella loihica PV-4 RepID=A3QEE9_SHELP Length = 299 Score = 269 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 2/297 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + LAD +E +PD+ L TP +Y + ++ G K Sbjct: 4 TSGNSMIQSLADTAFAYGRREGDHDTSIPDLTLHIRNTPTEPLHCIYTLSLSLILQGSKQ 63 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 I++R+ A + +L T LP T AT P GL L +D + + ++ + Sbjct: 64 VAIDDRLRICSAGQSMLTTFDLPVISHVTEATRYHPFIGLVLKLDYGLIAQTCTELNLER 123 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + + I++ + + A RLL + P L + +EI+ +L G G Sbjct: 124 PSK-DLRYQAISTQDIDTGLCDAMSRLLGLHLTPEYIESLAQLYKKEIVIRLLHGSHGMH 182 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L S + I +++ ++ + + + + +LA +A+MS SAF +FK++T +SPLQY Sbjct: 183 LRHLASVGSPSRQIVQIVAWMKQNFAQAIGINELADKAHMSASAFRQHFKALTGSSPLQY 242 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 LK+ RL +AR ++ +G+ AS A+ VGYES SQFSRE+ R FG+ P +D R+R Sbjct: 243 LKHLRLQEARDQMLLNGLDASQASGVVGYESPSQFSREYSRLFGLPPQKDIQRLRQA 299 >UniRef50_Q1Q9Q6 Transcriptional regulator, AraC family n=2 Tax=Gammaproteobacteria RepID=Q1Q9Q6_PSYCK Length = 284 Score = 269 bits (688), Expect = 9e-71, Method: Composition-based stats. Identities = 84/280 (30%), Positives = 145/280 (51%), Gaps = 4/280 (1%) Query: 30 ADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRY 89 +++ K+ K ++ +P++ + P + EP I I+ G + Y+ + ++ Sbjct: 6 IEQLLKILLKNKTIESTIPNLFFYCADRPSKTVSYIQEPSICIVLQGEREIYLGKDCQKF 65 Query: 90 DANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 D + + V +P +A+S+ P+ L + ++++ +QE+L I + + Sbjct: 66 DNSSLMFCPVDIPLSMHIKHASSDHPVIVLSMKLNLVMIQEVLARIPPQQQVKEGYLG-- 123 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 L + I+ A ERL+++++ P D L I +EI Y +L+ G L LV +H Sbjct: 124 -IKWQLDDAIMQAFERLVNLLDCPNDTGFLSSLIQQEIYYRLLSAQQGNKLRQLVINGSH 182 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 I++ ++ E + + LA+ MS+S FH +FK +T SPLQY K RL +AR Sbjct: 183 THRIAQATDWLKAHLDEPVVIGDLASRCGMSISGFHQHFKEITQLSPLQYQKKLRLMEAR 242 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 +II + + S AM+VGYES SQFSRE+KR FG +P D Sbjct: 243 RLIITNDSQISQIAMQVGYESPSQFSREYKRLFGNSPNSD 282 >UniRef50_Q15TL4 Transcriptional regulator, AraC family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15TL4_PSEA6 Length = 301 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 96/294 (32%), Positives = 161/294 (54%), Gaps = 11/294 (3%) Query: 28 LLADKVNKLKNKENSLSGLLPDVRLLYGETPF-ARTPVMYEPGIIILFSGHKIGYINERV 86 L KV +L E + +P + L +TP + PV+Y+P I ++ G K Y+ + Sbjct: 3 ELIKKVFELAPHEGDFNTSVPHLSLFRRDTPTTSPMPVIYQPSIYMVLLGSKAAYLGKER 62 Query: 87 FRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM- 144 ++YD YL+ VPLP E + A+ + P R++++ + ELLM + ++ + Sbjct: 63 YQYDPMHYLVSCVPLPLEGQILQASEQRPYLAARISLETHMINELLMQMPDEPEAPVTAI 122 Query: 145 --------AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 ++ GI + ++ +I RLLD A +LG+ ++E++Y++L G Sbjct: 123 DIQSNDGTSSRGIYVSKMNTDIQHTLSRLLDCAHSTTKAHVLGQLALKELIYHILNAEHG 182 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L A + I+ VL+ I Y ++ + LA++ANMS S+F+H+FK+ T+TSP+ Sbjct: 183 SLLRAFACQDRQQYHIANVLQFINRHYASSMDIATLASKANMSESSFYHHFKAATNTSPI 242 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 QY+K RLH A+ ++ + A++AA VGY SASQFSRE++R F V P +DA Sbjct: 243 QYIKMVRLHAAKRKMMFEQHNATSAAFEVGYTSASQFSREYRRLFSVPPAQDAR 296 >UniRef50_B6WPQ1 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WPQ1_9DELT Length = 313 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 85/296 (28%), Positives = 144/296 (48%), Gaps = 2/296 (0%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 +E+I L D + + + + L+ E P A P + ++ G K Sbjct: 9 KEDILAALKDILMRHLPAPEIRPSPIDGLVLVRREDPPAPDRCFERPLVSVIVQGSKRSL 68 Query: 82 INERVFRYDANEYLLLTVPLPFECETYAT-SEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I + F + ++L+ + +P + T P L +D L +L++ + Sbjct: 69 IGSQEFVFRRGQFLVSGIDMPSSSSFFDTAPGQPFLSLFFYLDRQILTDLMLRM-RPAGK 127 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 P G+ A E L A RL +++++P I I++E+ Y +L GP G L Sbjct: 128 APQEDGPGVAVADAEPEFLEAVLRLAELLDKPEQIAIRAPMILQELHYLLLIGPLGHVLR 187 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 L ++ + S + + + + + +E LA + MS+S H +FK+VT SPLQYLK Sbjct: 188 GLYAQGSQNSQVLQAVSILRRDLGAPVRMESLARQVGMSLSTLHRHFKTVTGLSPLQYLK 247 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 RLH+A+ +++ + M+A++AA+ VGYES +QFSRE+KR FG P D R R + Sbjct: 248 QLRLHEAQRLMLMEDMRAASAALSVGYESVTQFSREYKRMFGEPPHRDIQRKRTLA 303 >UniRef50_B8DSD0 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSD0_DESVM Length = 299 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 150/289 (51%), Gaps = 2/289 (0%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 +L +K+ K +++ L + + L + + Y P + ++ G K I Sbjct: 12 AILKEKLLKWLPEQSRLETQIFGLALSRFDQETSAEKCFYHPIVALIVQGFKRSMIGNHD 71 Query: 87 FRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 Y +++ V +P T+A+ + P L + +D + +L ++ + Sbjct: 72 ADYGERHSMVVGVDMPGIFHITHASQQNPFLSLSVRLDRRIISQLATEMPSIV-TSDNKP 130 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 A+ + + SEE+L A RL+D+++ P + I+REI +++L+G G L + Sbjct: 131 ANPVAISEASEELLEAFIRLVDLLDTPSRIPVFAPMILREIHFHLLSGSQGDCLRLFSTG 190 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 T S I++ + + YT +L +E+LA + NM+ S F+ +FK VTS SPLQ+ K RL+ Sbjct: 191 GTQTSQIAQAITWLRENYTGHLHMEELARQVNMAPSTFNRHFKQVTSLSPLQFQKRLRLY 250 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +A +++ +G A AA+ VGYES SQFSRE+KR FG P D A+ R+ Sbjct: 251 EAERLMLLEGKDAGTAAVMVGYESGSQFSREYKRQFGAPPRRDVAQKRS 299 >UniRef50_A9U6Q0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6Q0_PHYPA Length = 263 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 2/255 (0%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLR 119 + +P + I+ G KI + ++Y ++YL +++ +P + + E P +R Sbjct: 3 PICRIQKPSLCIVAQGEKIIILGNESYKYGVSDYLAVSLDVPISGQVIKPSPEAPFLSIR 62 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG 179 L++D ++ E++ + S + ++ +L A RL+ +++ P D L Sbjct: 63 LDLDAGEIFEIMKETHLFPESIEHYPKS-LFVGKMNINLLDAVIRLVRLLDTPKDILALA 121 Query: 180 KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMS 239 II+EI+Y +LT G + + +HF+ I+ V++RI+ + + L + +LA ANMS Sbjct: 122 PLIIKEIIYRLLTEKEGDVFKQIATSGSHFATIAEVVERIKTNFDKPLRINELAQIANMS 181 Query: 240 VSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKR 299 S+ + +FK VT+ +P+QY K RL + R ++I D + A VGYES SQFSRE+ R Sbjct: 182 TSSLYRHFKQVTAMTPVQYQKQLRLQEGRRLLITDKYNVADVAFHVGYESPSQFSREYAR 241 Query: 300 YFGVTPGEDAARMRA 314 FG P D RM++ Sbjct: 242 LFGCPPTTDILRMQS 256 >UniRef50_A3YHM2 Putative transcriptional regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3YHM2_9GAMM Length = 293 Score = 267 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 3/289 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M E+ L + ++ LS +PD + + P +Y P I+ G K Sbjct: 1 MTLAELLALATHYIESQTMDDDELSSPIPDFFVHQSKKPTQLNACIYHPIACIILQGSKE 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + Y A L+ + +P A+ E P GL + +D+ L+ L +IGE + Sbjct: 61 AIVGGEKISYRAGMSLIASHSVPAFSSIVEASEEAPYIGLAICLDLGILRSLQREIGELD 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + + +A S+ ++ A R + +PL+ +++G I++EI + +L G Sbjct: 121 ILNKTF--KPLCAAQSSDALIDAMGRYFALAGKPLEMKVMGPLILKEIHFLLLKSSNGDM 178 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L + +H S +++ + I + LS+ +A MS S+F+ +FK VT ++PLQY Sbjct: 179 LRHLTEQDSHVSKVTQAIDVIRQNFKTALSMPDIAKNIGMSTSSFYEHFKQVTKSTPLQY 238 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 K RL +A+ +I + SAAA VGYES +QFSRE+ R FG TP + Sbjct: 239 QKELRLIEAQRLIREENTSVSAAAFEVGYESPTQFSREYSRKFGNTPRQ 287 >UniRef50_Q65QP8 AraC protein n=7 Tax=Pasteurellaceae RepID=Q65QP8_MANSM Length = 302 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 84/277 (30%), Positives = 142/277 (51%), Gaps = 2/277 (0%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 ++ + + + + + + + PF+ V+ EP I I+ G + + + + +D Sbjct: 25 ARLLDVIPHNQTYHSPIKGLIIHHSDHPFSYDNVIQEPSICIVIRGEREVQLGNQCYLFD 84 Query: 91 ANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 ++ V +P + AT+E P + + +D+ + ++L++ + S + Sbjct: 85 NRHFMFCPVNVPMCGKVLQATAEEPFVVMSMKIDLQAVNKILLE-QTALLAKNSENPTAF 143 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF 209 L E+ A ERLL + E D L I +EI Y +LTG G L +VS ++ Sbjct: 144 GQWHLDAELENAFERLLLLHENTKDITFLAPLIQQEIYYRLLTGEQGDKLKQMVSFGSNT 203 Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 I++ + ++ Y E ++VE LA MS+S FH++FK T+ SPLQY K+ RL +A Sbjct: 204 QKIAKATEYLKAHYIETITVESLAELCGMSLSGFHNHFKKHTTLSPLQYQKSLRLMEANR 263 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 +I + + S AA +VGYES SQFSRE+KRYFG P Sbjct: 264 LISQENLPISTAAFQVGYESPSQFSREYKRYFGKAPS 300 >UniRef50_B6RAD1 Transcriptional regulator, AraC family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RAD1_9RHOB Length = 294 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 101/293 (34%), Positives = 160/293 (54%), Gaps = 3/293 (1%) Query: 22 REEICRLLADKVNKLKNKE--NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + + D ++ + LP VR+ + P R P++Y III+ G K Sbjct: 1 MTTLRQPMNDLIDHFHMGDDNAIAETSLPGVRVFHSTVPLPREPLVYGSSIIIIGQGRKS 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 Y+ + F+YD N YL++ +PL FEC T A+ E PL+GL +++D L EL+ + +D Sbjct: 61 LYLGDLSFQYDENNYLVVGLPLAFECSTEASPENPLSGLVVDLDTSLLLELINKV-DDPV 119 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + G +S+ + ERL + P+D +LG ++RE+ Y L G L Sbjct: 120 VSNTTTKLGAEPVAMSDHMQDVVERLTACLLSPVDTSVLGAGLVRELHYRALNDRHGSVL 179 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 L ++ + I+RVL+++ SV+QLA E MS SAF+ F+S T +P+QYL Sbjct: 180 RMLSNQGNPSARIARVLQKLSGNLAGKYSVDQLAKEIGMSSSAFYRAFRSTTGETPVQYL 239 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 K RL+ AR +I+++G +A+ AA +VGYES SQFSR+FK +FG T + + Sbjct: 240 KKLRLNHARSLILYEGKRANEAATQVGYESLSQFSRDFKVHFGTTAAKARESI 292 >UniRef50_Q0SK59 Transcriptional regulator, AraC family protein n=2 Tax=Corynebacterineae RepID=Q0SK59_RHOSR Length = 307 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 80/297 (26%), Positives = 145/297 (48%), Gaps = 4/297 (1%) Query: 23 EEICRLLADKVNKLKNKENSLSGLLPDVRLLYGE-TPFARTPVMYEPGIIILFSGHKIGY 81 ++ + + + L + + L A + EP ++I+ G K Sbjct: 5 PDLLDEIRAGITVHARPD--LQTPIDGLLLSKVTAESAAPEYSLTEPLLVIMTQGGKRLL 62 Query: 82 INERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 + +R++ Y A + L++T +P + P + L + + L++ + Sbjct: 63 LGDRLYEYRAGQCLVVTASVPVTGHYIDISEGAPSLAMGLVLRPAAIAALVLQAPTERWS 122 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + + I + +L AA R+L +++ P DA +L I +EIL+ +LTGP G + Sbjct: 123 RGAAGVPAIETGDADVHLLDAAARMLRLLDHPADAPVLAPLIEQEILWRLLTGPHGSTIR 182 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 + + + +SR + I + Y+E + ++ LA ++MS SAFH +F++VT+ SPLQY K Sbjct: 183 QIGMADSDLAHVSRAIHWIRDNYSEPMRIDDLARLSSMSASAFHRHFRAVTAMSPLQYQK 242 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 RL AR M++ + VGY+S SQF+RE++R FG +PG+DA +R Sbjct: 243 RIRLQHARSMLVAHPGDVAGVGHHVGYDSPSQFNREYRRLFGASPGKDAHGLRGNTA 299 >UniRef50_B4Y346 Putative AraC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PL2G6 RepID=B4Y346_9BURK Length = 324 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 78/288 (27%), Positives = 146/288 (50%), Gaps = 3/288 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + ++ + + ++L+ P V Y P + ++ G K ++N ++ Sbjct: 1 MRALFDRHAPADGFFPSPVAGLQLIRASAPTDPLSVFYRPALCLVLGGRKRVFLNNQITE 60 Query: 89 YDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDI--GEDEHFQPSMA 145 Y ++ +L+++ LP + A+ P + L + ++ ++++ ++ + A Sbjct: 61 YGSDGHLVISQDLPALGQVVEASPLEPYLCVHLRFEQAEINRIVLEHGPPQEPEGASTRA 120 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 A G+ S +L A RL+ +++ P D L I R I++ +L+ G L Sbjct: 121 ARGLYVEPSSAALLDAILRLVRLLDAPADQPTLEPLIRRGIVHRLLSSANGWRLARTART 180 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 I+R L+ + ++ E + V +LA A++S+ A + NFK+VTS +PLQY+K RL Sbjct: 181 GCCDHRIARGLEVLRARFRETIGVRELADIAHLSLPAMNLNFKAVTSFTPLQYVKQLRLQ 240 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +AR +++ M A+A AM +GY+S S+FSRE+ R FG P D AR+R Sbjct: 241 EARRLVVSTEMDAAAVAMTIGYDSPSEFSREYARMFGEPPSRDRARLR 288 >UniRef50_C6ARF9 Transcriptional regulator, AraC family n=4 Tax=Proteobacteria RepID=C6ARF9_RHILS Length = 306 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 150/294 (51%), Gaps = 7/294 (2%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 + + S LP + + P++Y+P ++ G + +I ++ Sbjct: 5 LDKIRAMAMRHA---GRQSPQLPRLFAYTLDHTTEIDPLIYDPAASLVIQGTQRMFIGDK 61 Query: 86 VFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 +F Y + +++ + + A+ + P + L +D L +L++++ Sbjct: 62 MFEYGPGQSMIVAAEIAALGQICEASEDQPFLAVGLFLDPALLSDLVLEMA---AIPELP 118 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 SG +T S +L A RLL++++RP + ++ + + E+++ +L GP GG L +V Sbjct: 119 IESGYGVSTASASLLGAWGRLLELLDRPTEIPVMAQSLEHELMFRLLMGPHGGLLRQIVG 178 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + I + + I + YTE L+ + +AA A MSVS F+ FK+V + SPLQY K RL Sbjct: 179 SDSRLMHIRKAMAWIRDHYTERLNFKAVAALAGMSVSVFYDRFKAVAAVSPLQYQKYIRL 238 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 H+AR +I + + A+ VGYESASQFSRE+KR FG PG+D R +A G Sbjct: 239 HEARRRMIANQVSAAEVGFAVGYESASQFSREYKRLFGAPPGQDTERAKAGLGG 292 >UniRef50_A0RQF6 Transcriptional regulator, AraC family n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RQF6_CAMFF Length = 297 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 3/284 (1%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 + + K K + + + P +YEP I ++ G K Sbjct: 4 RDEILKLILKTKANYGEIQTDIKQLSFYTAIKPTEFLNTIYEPSICVIIQGQKAVGFGND 63 Query: 86 VFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 ++ Y+ ++YLL T +P + A+ + P L + + + E++ ++G+ + Sbjct: 64 LYSYNPHKYLLATTYIPARIQIEKASKDQPYISLVIKLKPESIYEVIKEVGDFKIQNKKN 123 Query: 145 AASGINSATLSEEILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPCGGALLALV 203 +G+ + L + +L A + + ++E+P DA L I++EI+Y +L L + Sbjct: 124 IKNGLCFSDLDDTLLEAIAKFVKLIEKPKNDAEFLSNLILKEIIYLILKQNG-DLLKQYI 182 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + ISR + I+N + EN+++++L+ E +S S + NFK +TS SPLQ+ K R Sbjct: 183 LEGNLANQISRAIMAIKNSFNENINMKKLSKEIGISESLLYQNFKKITSLSPLQFQKKIR 242 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 L +A+ ++I ++AS A +VGYES SQFSRE+ R FG++P Sbjct: 243 LEEAKNLLISTNLEASQIAFKVGYESPSQFSREYARMFGMSPKA 286 >UniRef50_Q1ZUN2 AraC-family trancriptional regulator n=2 Tax=Photobacterium RepID=Q1ZUN2_PHOAS Length = 304 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 111/293 (37%), Positives = 172/293 (58%), Gaps = 7/293 (2%) Query: 22 REEICRLLADKVNKLKN------KENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFS 75 + E+ R LA ++L + N + LL VRL + TP MYE GI+++F Sbjct: 2 KAELKRQLAIVASQLCEYYKISDQTNRVHTLLTGVRLFRIDRYHKLTPKMYEQGIVVIFQ 61 Query: 76 GHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIG 135 G KIG++N+ F YD + L+++ P CET+A+ + PL G+ +++DI + +L+ D+ Sbjct: 62 GSKIGHLNQHQFGYDVEQCLIVSTSYPITCETFASQQEPLMGINIDLDINAISQLVSDME 121 Query: 136 -EDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGP 194 E +++ G++ A ++E + LL+V+ PLDA++LG I+R+ YY+L Sbjct: 122 LESKNWGELDTRCGVSPAPMTESMYLCMLELLNVLHNPLDAKVLGPSILRQFFYYLLQSE 181 Query: 195 CGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTS 254 G L + + + IS V+ ++ + + L V +LAA A MSVS FH FK V + Sbjct: 182 KGYLLAHYCEQDSSLAKISTVIGHVQKNFAQKLHVNELAAMAGMSVSVFHKVFKQVVTDP 241 Query: 255 PLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 PLQY+K RL+ A+ I+ +G+ AS A+ RVGYESA+QFSREFKRYFGV P Sbjct: 242 PLQYIKKIRLNHAKNYILQEGLSASLASQRVGYESAAQFSREFKRYFGVPPSR 294 >UniRef50_Q1MYY9 AraC-family trancriptional regulator n=1 Tax=Bermanella marisrubri RepID=Q1MYY9_9GAMM Length = 300 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 153/288 (53%), Gaps = 7/288 (2%) Query: 27 RLLADKVNKLKNKE--NSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 + L +++ + E + LLP V+L + + P+MY+ G+ + G K G Sbjct: 4 KTLIEQLLEAAGGEKMGYVDTLLPHVKLYVLDQYQSACPLMYDSGLFFVLQGSKRGKAAG 63 Query: 85 RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 + F YLLL+ +P ECET A + P+ G+ + + ++ + + + Sbjct: 64 QEFSTSPQTYLLLSNTMPVECETLAQPDEPVVGIYVAFNRDEISRQVHIMESHKIRGEQE 123 Query: 145 AASG-----INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 + + INS + + + +L + M P ILG + ++ Y VLTGP L Sbjct: 124 SDAAEQLNVINSMSTPDRLAVLVSQLAEAMLDPCQLEILGPSFVNQLYYQVLTGPGYHTL 183 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 VS + FS ++R ++ +++ T+ +SV+ LA+ A MSVSA+HH FK VT SPLQ+L Sbjct: 184 KQWVSADSKFSAVTRSIEYMQSNLTKRISVDDLASIAGMSVSAYHHYFKQVTGVSPLQHL 243 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 K RL +A+ +++ + AS A VGYES +QFSREFKRYFGV P + Sbjct: 244 KQLRLVRAKDLLVQQKLSASQTAFDVGYESPNQFSREFKRYFGVPPSK 291 >UniRef50_B1KC45 Transcriptional regulator, AraC family n=17 Tax=Bacteria RepID=B1KC45_BURCC Length = 373 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 135/292 (46%), Gaps = 3/292 (1%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFAR-TPVMYEPGIIILFSGHKIGYINER 85 LA + + L +R P + ++ + ++ G K + + Sbjct: 75 ARLAALIAAYAPHDGMFDLPLRGMRAARASAPSPQWNHGVHHACLSLVGQGAKSMRVGDA 134 Query: 86 VFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 + D + L+ T LP T A P +L +D ++ L + ++ Sbjct: 135 TYGIDESRMLVATADLPVTGRVTRADPAEPFLYAQLELDPRRIAALTPVVFPH-GLPKAV 193 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 +++ + EI+ A RL+ ++ +P D +L I+ EIL +L GP G + + Sbjct: 194 DYGALDTLDATPEIVDAVARLMQLIAQPDDLDLLAPLIVDEILIRLLRGPSGARVAQIGD 253 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + ISR + I + Y + ++V+ LA + MS S FHH+F++VTS SPLQ K RL Sbjct: 254 AGSTTQRISRAVAWIRDHYLDPMAVDALARQVEMSPSTFHHHFRAVTSMSPLQCQKVLRL 313 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 +AR ++ M A A VGY SASQFSRE+ R FG PG D AR+R Sbjct: 314 QEARRLMCLSAMDARQACRSVGYVSASQFSREYARLFGDAPGRDVARLRGEA 365 >UniRef50_Q2S734 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S734_HAHCH Length = 304 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 82/295 (27%), Positives = 150/295 (50%), Gaps = 5/295 (1%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 + LA + + + +P + + +P +++P + I+ G K E+ Sbjct: 8 IKELARLIQRHCPTDGVRESDIPRLSFIRSSSPTEPVLAVHQPAVCIVAQGAKKVISGEQ 67 Query: 86 VFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 +F+YDA YL+++V LP + A+ E P +RL++D+ L EL++D G ++ P Sbjct: 68 LFKYDAAHYLVVSVDLPIAGQVMQASPEQPYLCVRLDLDLTILSELILDEGSVDNSAP-- 125 Query: 145 AASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + + ++ +L A RL+ ++ + P D +L +EILY++ G GG L + Sbjct: 126 -HQSVGVSLVTPRLLEAVIRLVALLNDNPKDIAVLAPLAEKEILYWLANGDQGGILREIT 184 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + + IS+ ++ I+ + + +++L MS S+F H+F++ T +PLQY K R Sbjct: 185 NGDSRIRQISKAIQHIKTTFDQPFDMDELLKLTCMSASSFFHHFRTATHMTPLQYQKQLR 244 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 L +AR + VGY+S SQFSRE+ R FG+ P +D AR++ + Sbjct: 245 LLEARRRLFLGEQDICNIGYGVGYDSPSQFSREYARLFGLPPSKDLARIKNAGSS 299 >UniRef50_B0T5I6 Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. K31 RepID=B0T5I6_CAUSK Length = 303 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 93/300 (31%), Positives = 142/300 (47%), Gaps = 6/300 (2%) Query: 18 RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGH 77 +K E + + D V + + + L P +P + ++ G Sbjct: 3 HGLKMEPLLDRMRDLVLRHAEG-LQFVTAVESLSLGVLRQPLVPEFFFSDPMVCVVLQGA 61 Query: 78 KIGYINERVFRYDANEYLLLTVPLPFE-CETYATSEVPLAGLRLNVDILQLQELLMDIGE 136 K + R+ RYD + + LP C A + P + +++D L EL++ Sbjct: 62 KQVLVGGRLLRYDPSHSFASVIGLPATGCVLEAAPDKPYVAIGMSLDRTILAELVLAAPR 121 Query: 137 DEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 Q A+G AT+S +L A L +++ P D L K RE+ Y +L G Sbjct: 122 GTRPQ---RAAGFGVATVSPGLLEALNSFLSLLDYPEDIPALAKGREREVAYRLLQSEHG 178 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 L + + FS I +V+ + ++LS E LA A MSV +FH +FK+ T+ SPL Sbjct: 179 PMLRQAIHVEGQFSKIHQVIAWMRQDLDQHLSGEDLARRAGMSVPSFHRHFKAATAMSPL 238 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 QY K RLH+AR ++I A+ A VGYES SQFSRE+ R FG +P DAAR+R ++ Sbjct: 239 QYRKTLRLHEARKLLI-TNADAAKTAYAVGYESPSQFSREYSRLFGTSPARDAARLRGVE 297 >UniRef50_A9D252 Transcriptional regulator, AraC family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D252_9RHIZ Length = 296 Score = 259 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 90/292 (30%), Positives = 138/292 (47%), Gaps = 2/292 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M R+ + ++ +++ +E +L LL E P + P +Y P I ++ G K Sbjct: 1 MIRKALVTRVSSLLDQSGLREGALFHEDSGTHLLRHEAPTGQNPTVYRPLICLILQGAKE 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 N+R A + L+++ LP T A ++P L +D+ L+ L + Sbjct: 61 VGTNKRTITVRAGQSLIVSHALPVVSRITEAAPDLPYVALVFPLDLDLLRSLAPAVLPSS 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 + S S I+ EEI A R + R+L REI +L GP G Sbjct: 121 VSRASEPFS-IHLCDTDEEIEDALWRYFSQCDTDATRRLLAPITAREIHARLLMGPHGET 179 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L+ ++ S I + + I+ ++V++LA + MS SAF FK+VT TSPLQY Sbjct: 180 LHKLLWHESTASRIFQATRDIQTHLARAIAVKELARDVGMSSSAFFEQFKAVTGTSPLQY 239 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K+ RL +AR + K S A VGYES++QFSRE+ R FG +P D Sbjct: 240 QKDLRLLRAREALQTSSAKVSEIAFGVGYESSAQFSREYSRKFGRSPRHDRE 291 >UniRef50_Q65QM2 AraC protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QM2_MANSM Length = 290 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 5/286 (1%) Query: 29 LADKVNKLKNKENSL---SGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 L + KLK+ E +P++ + + ET + E GI ++ G K + ++ Sbjct: 5 LIRQTLKLKSGEKGTMGIETPVPELFVFHSETDLRDVSQLQESGICLILQGRKDVRVGDQ 64 Query: 86 VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 +RY A E++ TV LP E T + LRL D+ ++E++ ++ ++F + A Sbjct: 65 HYRYQAGEFVCYTVDLPIMTEYL-TDDGGYLDLRLFFDLPLMREIIDELNR-QNFSFAPA 122 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + +T S E++ A E L+ + E D I+ I + I +Y+LTG GG L + + Sbjct: 123 SQQKIVSTASPELIRAFEMLICLTENSQDLPIMLPLIKKAIYFYLLTGEQGGTLRQIALQ 182 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ++ I + ++ Y E+ +EQLAA ++MS+S F+ F+ +T SPLQY KN RL Sbjct: 183 NSNSQRIVETVGWLKEHYNESFDIEQLAAASSMSISGFYAQFRRLTGMSPLQYQKNLRLT 242 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 KA ++ S A +GY+S QFSRE+KRYFG +P D +R Sbjct: 243 KANALLKLGQKNISEIAFEIGYDSLPQFSREYKRYFGHSPRSDLSR 288 >UniRef50_B0C5B1 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5B1_ACAM1 Length = 291 Score = 256 bits (655), Expect = 6e-67, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 156/291 (53%), Gaps = 6/291 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 + + +++ E + + ++L R P +Y+P I ++ G K Y++ Sbjct: 4 IIELIDRHAISEGATETPIEGLQLFRTNHLVERLPGVYDPSICVIVQGQKRAYLDGTTHI 63 Query: 89 YDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAA- 146 YD ++YL T+P+P E E A+ E PL GL L ++ + E ++++ + S A Sbjct: 64 YDRDQYLCSTLPIPAEAEVVEASPEKPLLGLLLRLETRTMFETVLEMTALDRGSASRAEV 123 Query: 147 -SGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 G+ A E+ +RLL++++ P+ ILG ++E+++ VL G GGA + Sbjct: 124 VPGLTVAKWDEDFATGLQRLLELLDDPVALNILGSGRLKELMFAVLRGEAGGAFVHAF-- 181 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ISR L + E +S+++LA EA MS + FH FK VT+ SP+Q++K +RL+ Sbjct: 182 GGGMQQISRALTFLNANLHEAISIDELAKEAGMSRAVFHRKFKEVTTYSPIQFIKLHRLN 241 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 +A +I+ G A AA RVGY S SQFSR+F+RYFG +P + R+ Q Sbjct: 242 EASRLIV-SGSTAGDAANRVGYSSQSQFSRDFRRYFGKSPYQWGLEQRSEQ 291 >UniRef50_B5J4U5 Transcriptional regulator, AraC family protein n=3 Tax=Rhodobacteraceae RepID=B5J4U5_9RHOB Length = 300 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 2/292 (0%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + + + +N+ + L L+ +TP A +Y+P + ++ G K Sbjct: 7 MTGKTLLTRASAILNQSGIRNGGLLHENSGTFLVRQDTPTAVFSTVYKPMLCLILQGTKE 66 Query: 80 GYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 N++ A + L+++ LP A E P L +D+ L+ L ++ Sbjct: 67 IGSNDKSLTAHAGQSLIVSHILPVVSRIIEAGPEQPYVALVFPLDLSLLRSLASEVVPSF 126 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 Q S S I + + +R D E + + REI +L P Sbjct: 127 SDQSSDPFS-ICLCDTDDALEGTMQRYFDQCETQQTRQFIAPITKREIHMRLLLSPHAQI 185 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L+ ++ S + + + I++ + + V +LA A MS SAF FK+VT TSPLQY Sbjct: 186 LRKLLWHESTASRVFQATENIQSNLADKIIVGELAQSAGMSSSAFFERFKAVTGTSPLQY 245 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 K+ RL +AR + K S A VGYES++QFSREF R FG TP +D A Sbjct: 246 QKDLRLLRARGELQASNAKISDIAFGVGYESSAQFSREFSRKFGRTPRQDRA 297 >UniRef50_B2IB97 Transcriptional regulator, AraC family n=5 Tax=Rhizobiales RepID=B2IB97_BEII9 Length = 318 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 97/282 (34%), Positives = 149/282 (52%) Query: 37 KNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLL 96 + S L VR+L E PV+Y+PG I + G K G + V+ YD YL Sbjct: 35 CPHQGYNSTPLQGVRILRTEAVLHDVPVLYKPGAIFVLQGRKQGVLEGEVYLYDEEHYLA 94 Query: 97 LTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSE 156 ++VP+PF E+ A+ E PL + + D+ E+ ++G + S+ + Sbjct: 95 VSVPVPFRMESVASPERPLLAVYVEFDMRLAAEIASEVGARHARSTVGKVKSLVSSRMEP 154 Query: 157 EILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVL 216 I RLL + P++ ILG I+RE+ Y VL GP GGA+++ + + I + L Sbjct: 155 AIEDVVLRLLRALHDPVELTILGSGILRELHYRVLVGPQGGAMISALQQCGTSGRIVQSL 214 Query: 217 KRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM 276 R+ Y+ + V LA EA MSV ++H +FK++T +SP+QY+K RLH+AR+M+ Sbjct: 215 ARLRETYSSEILVAALAGEAGMSVPSYHVHFKALTGSSPIQYVKAMRLHEARLMLARQDK 274 Query: 277 KASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + A VGY S +QFSR+FKR+F T E+A +R G Sbjct: 275 TIAEVAASVGYASPAQFSRDFKRHFRRTASEEAEWVRRHLGE 316 >UniRef50_A6LZC1 AraC-type transcriptional regulator domain protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LZC1_CLOB8 Length = 318 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 144/300 (48%), Gaps = 3/300 (1%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTP-VMYEPGIIIL 73 + + LA + ++ L+ + + ++ P Y P + I+ Sbjct: 12 SDNIERLLQTKMTRLAHLLYTCAPQDGVLTLPISGLSIIRYSGTEIDCPKTFYLPSLSIV 71 Query: 74 FSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLM 132 G + I ++ D ++ L+ + LP +T AT PL +R+++D ++ E++ Sbjct: 72 AQGARSISIGHETYKLDKSQMLMNPITLPISLQTMKATKSEPLLIIRVDLDPERIAEIVP 131 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + + I+ A RLL+ +++P D + I+ EIL +L Sbjct: 132 KVYSH-GLPEIKQWCAGHVMNADISIIDAMIRLLECLQKPGDVEFIAPLIMEEILIRLLR 190 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 GP G + A+ + + +S + + +++ + V LA +MSVS+F+++FK+VTS Sbjct: 191 GPAGIYVAAMGFADSEVNQVSEAIAWLRKNFSQAVKVSDLAKLTHMSVSSFYNHFKAVTS 250 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 SP+QY K RLH+AR +++ M A+ A VGY S SQFSR++ ++G P +D R+ Sbjct: 251 MSPMQYQKALRLHEARNLMLSQHMDATTACRMVGYVSNSQFSRDYSAFYGAPPRKDIGRL 310 >UniRef50_Q1J2Q3 Transcriptional regulator, AraC family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J2Q3_DEIGD Length = 365 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 3/291 (1%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART-PVMYEPGIIILFSGHKIGYINE 84 L + V + + + +P + + + +P + I+ G+K I Sbjct: 15 LARLRELVARHALYDAVFTTRVPGITVARSTRTHEAMEHSVQQPALCIVAQGNKSVQIGA 74 Query: 85 RVFRYDANEYLLLTVPLP-FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 + Y+ + L+ V LP T A+ P +R+++D + EL + + Sbjct: 75 EQYTYNPDRMLVYAVNLPTAFWVTEASPSAPFLTVRVDLDPQFIAELALKLYPH-GLPRL 133 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + G+ I+ AA +L+ E DAR +G I+ E+L +L P G + L Sbjct: 134 QDSRGVQMTAADPAIIHAAVHILETAENERDARWVGPIILDELLMCLLLSPVGPVVAQLG 193 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 + ++R ++ I+ + L+++ LA A++ VS F+ +FK+V + SPLQ+ KN R Sbjct: 194 RVDSGAQRVARAIEWIQGHLDKPLNIKLLAERAHLGVSTFYAHFKAVATMSPLQFQKNLR 253 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 L +AR ++ + A + +VGY SASQFSR++ R FG TP + + RA Sbjct: 254 LQEARRLLPSTSLDVGAISRQVGYASASQFSRDYSRLFGRTPRTEMTQGRA 304 >UniRef50_B0S9N6 Transcription regulator n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S9N6_LEPBA Length = 295 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 5/293 (1%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 +++ +A+ K +P V ++ GE P + +YEP + ++ G K Sbjct: 1 MQKLVNEIAELCCSATTK--PTLTGIPRVLMIQGEVPEHQLAAVYEPLVGLVVQGGKTIS 58 Query: 82 INERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 I ++ + Y ++ +P A + P + L +D L +LL D F Sbjct: 59 IGRQMVPMEGPSYFVIPTEMPATGSVRQAKNGRPYLSVALQLDQKVLLDLLKDTPNTVAF 118 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + ++ + E L R+L +M+ P L REILY+VL GP G L Sbjct: 119 KNDTDE--FSACPATPEFLEVWLRMLRLMKTPEHIAALAPAYEREILYHVLIGPEGWRLR 176 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 L S I + ++ + +T + +E LA +A M ++ FH FKS+T SP+Q+ K Sbjct: 177 QLFQSHQKGSSIHQSIQWVRQHFTHSFEIEDLANKACMGITTFHRQFKSITGLSPIQFQK 236 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 RL +AR ++ + G + AA+ VGYES SQF+RE+ R+FG +P D R++ Sbjct: 237 QLRLLEARKLLTYSGYSVTDAALDVGYESTSQFNREYTRFFGASPARDTKRLK 289 >UniRef50_UPI000197C8CE AraC family transcription regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C8CE Length = 299 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 5/294 (1%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E+ L + ++ + + ++ + P + ++ G K Sbjct: 2 NNELLNLCRHYADARAVFNGVITTPVSGLTIVRSIHQGELQVAVSRPLVAMMLQGRKRVT 61 Query: 82 INERVFRYDANEYLLLTVPLPFEC-ETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 F Y E ++++ +P E T A++ P L L +DI L ELL + Sbjct: 62 TGSNSFEYGPGEAMVISADIPIEGLITKASAGEPYYSLVLELDISLLSELLSAM----KI 117 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 + + +AS I+ + + A RL+ + E ILGK +IRE+ Y++L G A+ Sbjct: 118 KRNRSASNIHIEPIRTNVADTACRLVRLFEEHEALNILGKGLIRELHYWLLRSEHGEAIR 177 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 AL + +H +SR ++++ N + + +++LA+ MSV FH F+ +T+ +PLQ+ K Sbjct: 178 ALGAMDSHSVKVSRAIEKLRNDFMYPIKIKELASSVGMSVPVFHKYFRLLTTLTPLQFQK 237 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL AR ++ +G+ + AA VGY S SQF+RE+ R F ++PG D RA Sbjct: 238 QLRLIHARNQMLTNGVSITHAASAVGYNSVSQFTREYSRMFNISPGRDNKLFRA 291 >UniRef50_Q1GMB4 Transcriptional regulator, AraC family n=3 Tax=Rhodobacterales RepID=Q1GMB4_SILST Length = 299 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 93/288 (32%), Positives = 153/288 (53%), Gaps = 4/288 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 M + + + D V + + + + YEP + ++ G K Sbjct: 1 MVPKNLISDVFDLVERTGTLGEGCATGVDGLFAFAQTKTTECAAAFYEPIMCLVLQGAKE 60 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 Y+N RV RY A + L+++ +P E A+ + P L L +D+ + + +IGE + Sbjct: 61 AYLNGRVVRYSAGDTLIVSHAIPVESAVMQASPDAPYTALALRLDLAMARSMNDEIGERD 120 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 S A +N+A ++ A RL +V + P++AR L I+REI + +L GG Sbjct: 121 D---SANAHSLNAAASDAALIDATHRLFNVSKDPVEARTLAPLILREIHFRLLRAQHGGM 177 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 L L+++ + S I++V+ + + NL V LA+E MS+SAFH +F+SVT+T+PLQY Sbjct: 178 LRQLLNQDSPASRIAQVIATMRENFKSNLPVADLASECGMSLSAFHEHFRSVTATTPLQY 237 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 K+ RL +AR +++ + ++AA VGYES +QFSREF R FG+ P Sbjct: 238 QKDLRLLEARRLLVTENRSVASAAYEVGYESPTQFSREFSRKFGMPPS 285 >UniRef50_C6ARF6 Transcriptional regulator, AraC family n=12 Tax=Proteobacteria RepID=C6ARF6_RHILS Length = 299 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 4/286 (1%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 D V + S L+P + + G+ + P +Y I + G K I + + YD Sbjct: 10 DIVLRHAAT-GSTDTLIPRLDMFVGQDTMGKVPCLYRSMICFILQGSKRVAIGDTLLSYD 68 Query: 91 ANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 + +Y + + LP + A P + L ++ L EL + + G+ Sbjct: 69 SAQYFISALDLPLTGQILDAGKGRPYVAVSLVLEPGLLAELAATMPSVR--ESDQKGMGV 126 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF 209 + + RLL +++ P D IL I RE+LY +L GP G L + + Sbjct: 127 AVNPMIAPLRDTLLRLLSLLDNPADIPILSPMIERELLYRLLQGPQGRLLRQIARPEGAL 186 Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 + + R + I + L +E L + MS ++ H +F ++T SPLQY K RL +AR Sbjct: 187 ARVRRAIAWIRDHPDAQLRIEALCDASGMSRASLHRHFLAITGFSPLQYQKQLRLQEARQ 246 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 +++ G AS AA VGYESASQFSRE+ R FG P MR Sbjct: 247 LLLAGGHSASDAAFAVGYESASQFSREYLRQFGAPPARHVQEMRQA 292 >UniRef50_A7HDG1 AraC-type transcriptional regulator domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HDG1_ANADF Length = 297 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 96/280 (34%), Positives = 147/280 (52%), Gaps = 3/280 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA + L ++E P V + TP +Y +I++ SG K + E+ F Sbjct: 11 LAAGIAGLAHQEGCSRTRHPGVVVWRMTDAHPPTPTLYAASLILVGSGEKQATLGEQTFA 70 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 Y+A+ L++T PLP C T A+ P+ L + +++ L+EL+++ + + Sbjct: 71 YNADHLLVVTSPLPMLCRTIASETEPVLTLVVEIEMPLLRELILEAPASSPPRWPASTRT 130 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTH 208 + LS E+ A RLL + ++LG+Q IRE+L+ VL CG +L A+ + Sbjct: 131 VFRMALSPELEDAGARLLRHLGDDRRTKVLGRQTIREMLFLVLESSCGDSLRAVA--EGT 188 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 S S VL+ + + + VE+LA A+ SV FH FK++T TSPLQY+K RL +AR Sbjct: 189 VSRFSHVLRHMNGNFAGRMKVEELARLAHTSVPTFHQRFKAMTGTSPLQYMKTLRLTRAR 248 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 ++ M A A VGYES SQFSRE++R FG P D Sbjct: 249 QLLREGAM-VKAVAHDVGYESESQFSREYRRLFGGPPSSD 287 >UniRef50_A4BKJ5 Probable transcriptional regulator n=1 Tax=Reinekea blandensis MED297 RepID=A4BKJ5_9GAMM Length = 297 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 76/283 (26%), Positives = 142/283 (50%), Gaps = 4/283 (1%) Query: 30 ADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRY 89 +K + + + ++ P A +Y P + ++ G K + ERV + Sbjct: 10 IAYADKHRLSNEPTPIGVGGLSIVRSREPSALMNTLYNPLLCLVLQGQKEARLGERVVTF 69 Query: 90 DANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 A E L++++ +P + T A+ P L L + + ++ + ++ + A+ Sbjct: 70 SAGESLIVSINIPTVSQVTAASPAKPYVALALEICLDTIRAIQAELELSDDDVADNAS-- 127 Query: 149 INSATLSEEILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 I S E++ A +RL ++ +R + +I+ ++REI + +L GG L L + Sbjct: 128 IASGISGGELVQAVKRLFELRDRSYVEQKIMAPILLREIHFRLLLESHGGMLRRLAYPDS 187 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 H S I+R + +++ + E + V+ LAA MS S+FH +FK+VT+T+PLQ+LK+ RL A Sbjct: 188 HESRINRAILKLQKDFAEPICVQDLAALVGMSASSFHEHFKAVTATTPLQFLKDVRLLVA 247 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 + ++ + S VG+ES + FSRE+ R FG P ++ Sbjct: 248 QQKLLATALSVSTVGFEVGFESTAHFSREYARKFGYPPSQNRR 290 >UniRef50_B9JLS7 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLS7_AGRRK Length = 292 Score = 250 bits (638), Expect = 6e-65, Method: Composition-based stats. Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 6/285 (2%) Query: 25 ICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE 84 + + +A V+ +P + + + TP ++EP + G K+ + Sbjct: 11 LLKAVAPFVSARAGTVGV-PTPVPRLTIWTSARATSPTPAVFEPMFYAVLRGTKVLIMGA 69 Query: 85 RVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 F + + + LP+ + T A P G+ L++D L ++ DI + E Sbjct: 70 NRFELVTGDCAVSSFGLPYSHQLTGAKPNFPYVGVSLHLDADILTRVMFDIPKREDRW-- 127 Query: 144 MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV 203 + + L + A RL++++ P D L E+ Y +L G L + Sbjct: 128 --TCAVAAGGLDGPVGDAFARLVELVNAPDDIGALAPHYEFELYYRLLQSSMGDTLRQVS 185 Query: 204 SRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYR 263 R F + + + ++E +++ LAA ++MSV++FH +FK VT SPL + ++ R Sbjct: 186 QRNGRFQQLKSAADWLASNHSEPVNIPALAAASHMSVTSFHRHFKEVTGFSPLAFQRHIR 245 Query: 264 LHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 L +AR ++ S A VGY+S SQFSRE+K FG P D Sbjct: 246 LLEARKLLASGSTNVSRVAYEVGYKSPSQFSREYKSMFGSAPVAD 290 >UniRef50_A7GXA4 Transcriptional regulator, AraC family n=2 Tax=Campylobacteraceae RepID=A7GXA4_CAMC5 Length = 300 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 144/291 (49%), Gaps = 5/291 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPV-MYEPGIIILFSGHK 78 M + + + + + + + + ++ + P +YEP ++ G K Sbjct: 2 MSVQNLREQIKELLLQKYGVAGHANSQMEALKFYITDRPGESLRAALYEPSFCVILQGAK 61 Query: 79 IGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGED 137 + ++ YD N YLL + +P T A+ + P L L + ++ E+L +I E Sbjct: 62 AVGFGKNMYGYDENTYLLASTYMPLNVRVTKASKDEPYVSLALKFSLDEIYEVLKNI-EI 120 Query: 138 EHFQPSMAASGINSATLSEEILCAAERLLDVMERPL-DARILGKQIIREILYYVLTGPCG 196 + + G+ LS+E+L RL+ + ++P + + I +EIL+ + Sbjct: 121 QKQNLQKSEKGVFFGELSDELLEPILRLVWLNDKPKSNIDYIAGLIKKEILFALANDKKS 180 Query: 197 GALLA-LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSP 255 G L + + + ISR + +I++ + E ++++ LA +MS S+ + NFK++TS SP Sbjct: 181 GYFLNKFAMQGSASNKISRAIIKIKDNFNEKINIKDLARACDMSESSLYQNFKTITSLSP 240 Query: 256 LQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 + + K RL +A+ ++ + + + AA VGYESASQFSRE+ R FGV P Sbjct: 241 IAFQKKIRLEEAKNLLSNTDLPVAQAAFEVGYESASQFSREYSRMFGVAPK 291 >UniRef50_A9HXN5 Transcriptional regulator, AraC family n=9 Tax=Proteobacteria RepID=A9HXN5_BORPD Length = 306 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 5/296 (1%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + + + +P V +L P + +P + ++ G+K Sbjct: 2 TPTNALLEHARRYADLRVDAHGVATTPVPGVVVLRETAPSLLQYAISKPLVALVLQGNKR 61 Query: 80 GYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + ER + + A E LL++ +P + T A+ +P L + +D + L +IG Sbjct: 62 VSMGERSYDFGAGESLLISTDVPTVSQITRASQAMPYYSLVVELDTALIAGLAGEIG--- 118 Query: 139 HFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGA 198 P + E+ A RLL +++RP +LG ++RE+ +++LTG GGA Sbjct: 119 -AVPLAVQEPVRVEPTEAEVADTALRLLRLLDRPRHLAVLGPALLRELHFWLLTGRHGGA 177 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 + AL +H I R + + KY + + +E LA A MSVSAFH +F+ +TS +PLQ+ Sbjct: 178 IRALGVMGSHAQRIGRAVAILREKYAQPVRIETLADAAGMSVSAFHVHFRRITSLTPLQF 237 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 K RL +AR ++++G+ S AA VGYES QF+RE+ R FG+ P ++R Sbjct: 238 QKQLRLIEARRRMLYEGVSISRAADAVGYESVPQFTREYARLFGLPPARSIRQVRT 293 >UniRef50_Q6FB96 Putative transcription regulator (AraC family) n=2 Tax=Acinetobacter sp. ADP1 RepID=Q6FB96_ACIAD Length = 299 Score = 247 bits (630), Expect = 5e-64, Method: Composition-based stats. Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 6/289 (2%) Query: 24 EICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYIN 83 E + LA KV+ L E + L +Y+ G+ ++ G K I Sbjct: 12 EKTKSLARKVDGLVKNE-DFQTEISGFSLHRR-VNKQSIHCIYDLGLGVILQGEKQVLIG 69 Query: 84 ERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 +F Y + +L T+ LP T + P G+ L +DI + E+ G E+ Sbjct: 70 NEIFSYGCGQTMLTTIDLPAVSRLTQVSYSEPFLGMMLKLDIGMITEIA---GSMENINV 126 Query: 143 SMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLAL 202 + + + ++ A +RL+D++E P + I EI+ +L G G L L Sbjct: 127 TSNIPSFSIEQMDLGLIEALDRLVDLVEDPSLISQIAPLIQHEIIVRLLLGKHGDYLRNL 186 Query: 203 VSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNY 262 + I +V+ + N + ++ V+++A +ANM+ + F ++F+ +T +PLQY K Sbjct: 187 IKISVSEKNIFKVISWLRNNFLNDVRVDEIAEQANMTSATFRNHFREITRMTPLQYQKQL 246 Query: 263 RLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 RL +AR +++ ++ A VGYES SQF+RE+ R FG+TP +D Sbjct: 247 RLQEARKLMLMQSIEIRRVAESVGYESQSQFTREYVRLFGITPQKDLKE 295 >UniRef50_A9FZJ5 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FZJ5_SORC5 Length = 302 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 1/297 (0%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 L +++ + + +P + + R + I+ G K Sbjct: 1 MSPGRDELKTLISRWCPGDGVHASPVPGISCIKVSHSQQRAKRHWRASFCIVVQGTKEIL 60 Query: 82 INERVFRYDANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVDILQLQELLMDIGEDEHF 140 + +VFR Y++ + LP + PL GL+++ D L+E+ + Sbjct: 61 LERQVFREREPHYIVSPIDLPVTSRVMGVSPAQPLLGLKMDFDAALLREVAAQLDRARPE 120 Query: 141 QPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 I S+ +L AA RL +++ P DA +L + +E+ +++L GP G A+ Sbjct: 121 GLENPGRAIFIGKASDRMLDAAVRLGELLATPDDAAVLAPLVRKELTFHLLKGPDGPAIR 180 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 +V + I+ + ++ E++ + LA A MS +AF FK T+ SPLQY K Sbjct: 181 QIVRAGSLAHRIAEAVYHLQASLDEDVDIAALARAAGMSRAAFFKRFKEATAMSPLQYQK 240 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 RL +AR +++ +G A +A RVGY SASQFSRE+ R FG +P DA ++ Sbjct: 241 RLRLLEARRLMVEEGAGAEVSAFRVGYTSASQFSREYSRMFGNSPLRDARALQQKAA 297 >UniRef50_D0DBP1 AraC-type transcriptional regulator domain protein n=1 Tax=Citreicella sp. SE45 RepID=D0DBP1_9RHOB Length = 326 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 84/301 (27%), Positives = 139/301 (46%), Gaps = 9/301 (2%) Query: 11 RIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 I + CR AD ++ + S + ++ P + +P I Sbjct: 28 TIAQSSPPLAQLLAHCRRFADANSR---PDGSAPTPARGLTVVRALHPGELMVAVQKPVI 84 Query: 71 IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-TYATSEVPLAGLRLNVDILQLQE 129 +L G K F Y E +++ +P T A+ P L L +D L+ Sbjct: 85 AMLLQGRKRVTTLGASFEYAPGEAMVIAADIPTVSRITRASIAAPYYALVLELDPAILRA 144 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 L + P + + E++ AA RL +++RP +L ++RE+ Y+ Sbjct: 145 LRPAVSVRSGKAP-----PVRVEPIDAEVIDAALRLARLLDRPEALSVLADGLLRELHYW 199 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 +L G G A+ AL +H I+R + + +Y + VE+LA A MS AFH +F++ Sbjct: 200 LLMGVHGPAIAALGVPDSHAGRIARAVDILRREYARPIRVEELAEAAAMSEPAFHKHFRA 259 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +T+ SPLQ+ K RL +AR +++ +G K + AA VGY S +QF+RE+ R F PG+D Sbjct: 260 ITTLSPLQFQKQLRLIEARRLMLAEGAKIAQAAHTVGYASVTQFTREYGRLFDAPPGKDI 319 Query: 310 A 310 Sbjct: 320 R 320 >UniRef50_C5CNC1 Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus S110 RepID=C5CNC1_VARPS Length = 313 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 70/302 (23%), Positives = 136/302 (45%), Gaps = 5/302 (1%) Query: 18 RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPV-MYEPGIIILFSG 76 ++ L D V + + L P +R P PG++++ G Sbjct: 11 PEVIPAAAWARLRDMVAARTSADGRTDALYPGLRCYRFSRPVRYEKTQRLTPGVVVVLQG 70 Query: 77 HKIGYINE--RVFRYDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLMD 133 K ++ R Y A + L+L + A+++ P + L++ L + + Sbjct: 71 RKTAHLGGDRRSLDYGATQCLVLGAEVACLGTVVGASADAPYLAIHLDLPPDVLVKSFVA 130 Query: 134 IGEDEHFQPSMAASG-INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + E A +A ++ E++ A RLL + P+D R L + EI+ +L Sbjct: 131 LAESGTLAAEPARVTENFTAPVALEVVEAFARLLQAADDPVDRRTLAPLAVEEIVLRLLR 190 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 A+ ++ + + I + + LSV ++A +MS S F H+F+ V Sbjct: 191 SEAAAAIRSVGAVTRAGARIQAAIAFMRRHLGRPLSVAEIAGHVHMSPSHFAHSFREVAG 250 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 +P++ +++ RL +AR++++ G++ AA +VG+ESA+ F+R F+R F TP E R+ Sbjct: 251 VTPMRCIRDLRLEEARVLMLGAGLRPGDAAAKVGFESAAHFNRAFRRRFEATPAEYVRRV 310 Query: 313 RA 314 ++ Sbjct: 311 QS 312 >UniRef50_D0LTL2 Transcriptional regulator, AraC family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTL2_HALO1 Length = 290 Score = 239 bits (611), Expect = 8e-62, Method: Composition-based stats. Identities = 92/287 (32%), Positives = 139/287 (48%), Gaps = 12/287 (4%) Query: 29 LADKVNKLKNKENSLSG-------LLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 L + + E+ G + + LL + P A +YEP + ++ G K Sbjct: 3 LEQLIERASRHESLNPGANRQIARPIGGLLLLKQDAPSAFEATVYEPVMCLILRGRKQVS 62 Query: 82 INERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQ 141 + ++ + + E LL++ LP S+ P L L VD+ L+ L + E Sbjct: 63 VGQQTLSFGSGECLLVSHDLPVNSRI---SKAPYLALVLPVDLAILRRLYEQVEEAALD- 118 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 A + +L A R L + + P DA++LG I E+ Y +L P GG L + Sbjct: 119 -DERARATETHRADPALLDALCRYLALADSPSDAKVLGPLIATELHYRLLMAPFGGMLRS 177 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 L+ ++ S I+R + I L+V +LA MS S+FH +FK++TST+PLQY K Sbjct: 178 LLRHDSNASAITRAIAHIRGDLCAPLAVPELARRVGMSPSSFHKHFKAITSTTPLQYQKE 237 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 RL +AR ++ G +AAA VGYES SQFSRE+ R FG P D Sbjct: 238 LRLLEARRLLSTGGASVTAAAYDVGYESPSQFSREYARKFGAPPSRD 284 >UniRef50_Q82GC0 Putative AraC-family transcriptional regulator n=1 Tax=Streptomyces avermitilis RepID=Q82GC0_STRAW Length = 308 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 6/288 (2%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFR 88 LA + + S +P + L+ + A ++Y P I + G K +R + Sbjct: 15 LAAAIARHNEGLWS-DSAVPRLTLVALDELIAPVDLLYAPMICFIADGAKRTLAGDRSWV 73 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 + L ++ LP C + P L++D L +LL+++ + + Sbjct: 74 TGRGDMFLNSLVLPVTCTFE---QAPYRSAVLHLDGRLLADLLLELDGTDPLPLPRPGAP 130 Query: 149 IN--SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 +A+++ +L A R + +++ P D R L +I EILY +L GP G L Sbjct: 131 GAQVTASMTPALLDAVTRWVRLLDTPDDIRPLASRIEAEILYRLLAGPLGPILRQYTLAD 190 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + + + I Y E LS+ +AA A+MS + H +FK+ T SPL++ K RL + Sbjct: 191 SGAARVRVAAAYISTHYAEPLSIATIAATAHMSPATLHRHFKAATGMSPLRFQKLLRLQE 250 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 AR ++ A+ A VGY SA+QF+RE++R +G+ PG+DA+ +R Sbjct: 251 ARRQLVAGNTTAAVVAEAVGYASATQFNREYRRTYGLPPGQDASLLRG 298 >UniRef50_Q15RK2 Transcriptional regulator, AraC family n=8 Tax=Proteobacteria RepID=Q15RK2_PSEA6 Length = 297 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 146/297 (49%), Gaps = 14/297 (4%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 L+ ++ + + + V+L P P +YEP + + SG K N Sbjct: 4 ELIRQLIDAKAGQSGMIETRISGVQLFKITEPIRCAPALYEPSVTAIVSGGKEAIWNGNK 63 Query: 87 FRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDE----HFQ 141 YD N+Y+ T+ +P E T A+ + PL G+ ++++ + EL +++ + Sbjct: 64 HYYDKNKYICCTMSMPIEAGTPEASPDNPLMGVYISLNTRVMTELAIELESATGVTYKVK 123 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA 201 S+ GI++A E A RL+ + + D ILG IRE+ Y +L G G A+ Sbjct: 124 ESVHPQGISTANWDEAFTDALYRLIMLEKSTTDIAILGSSRIRELYYAILKGDSGYAVRR 183 Query: 202 LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKN 261 + I+R ++ + + E++++E LA + MS + FH FK TS SP+Q++K+ Sbjct: 184 SFGVG---NEIARSIELLSSNLNESVTIENLAHQVGMSRAVFHRKFKQATSMSPIQFVKS 240 Query: 262 YRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED-----AARMR 313 RL+ A M I +G + AAM VGY S+SQFSR+FKR +G P + R Sbjct: 241 MRLNNAA-MKIAEGRNVNVAAMEVGYVSSSQFSRDFKRMYGQAPKQWSQTIERKNNR 296 >UniRef50_C1TR85 Transcriptional regulator, AraC family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TR85_9BACT Length = 244 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 41/280 (14%) Query: 33 VNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDAN 92 +++ L + + L+ G +P + I ++ G K ++ E + YD Sbjct: 3 IDRRTRTRPRLETEIAGLVLIRGNSPTEPLSYTMDSSICLIAQGRKRIFLGEESYIYDDR 62 Query: 93 EYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSA 152 +L+ +V LP + SE Sbjct: 63 YFLITSVDLPVVAQVLEASE---------------------------------------- 82 Query: 153 TLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI 212 + +L A RL+++++ P D +LG I REI Y +L G G L +V+ H I Sbjct: 83 -ATPNMLEAFLRLVNLLKSPEDLPVLGLMIKREIFYRLLVGEQGPKLRRIVTAGNHSHSI 141 Query: 213 SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMII 272 + ++ + + + + +++LA+ + MS S FHH+F+SVT+ SPLQ+ K RL++AR +++ Sbjct: 142 ASTIEWLRRNFADQIKMDELASRSGMSQSTFHHHFRSVTAMSPLQFQKRLRLNEARRLML 201 Query: 273 HDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 + + A+ AA +VGYES SQFSRE+KR FG P +D M Sbjct: 202 TERLDAATAAFQVGYESPSQFSREYKRLFGTPPAQDVKNM 241 >UniRef50_A7JPV4 AraC family transcriptional regulator n=2 Tax=Mannheimia haemolytica RepID=A7JPV4_PASHA Length = 283 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 5/281 (1%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERV 86 R + + + L K + + + + + + +P + ++ G + N Sbjct: 5 RAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQDPSLCVVLLGERQICTNGHC 64 Query: 87 FRYDANEYLLLTVPLPFECETYATSE-VPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 + E + V LP +T + +E P + L +D + +++ + + + Sbjct: 65 QVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLDFDLIAKIITQLPPQKISENI-- 122 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + L EI RLL+++ P L I+ E+ +Y+L GG + +L+S+ Sbjct: 123 -NQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILNELYFYLLQSEQGGYIRSLLSQ 181 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + + I+ K +E K+ + L++ LA E MSV+ F+ +FKSVTS +PLQY K+ RL+ Sbjct: 182 DGNIAKIANATKILERKFADTLNMSALAEEVGMSVAGFYAHFKSVTSMTPLQYQKSLRLN 241 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 AR + G+ S A +VGYES SQFSRE+KR FG +P Sbjct: 242 AAREKLQA-GVSVSETAYQVGYESPSQFSREYKRQFGESPK 281 >UniRef50_A9G5E9 Transcriptional regulator, AraC family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9G5E9_SORC5 Length = 288 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 5/279 (1%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYD 90 ++ + +++ + L ++ +L P + +YEP + ++ G K + F Sbjct: 12 RQLPRPEDRASQYVRPLKNIGILRHHQPTSFEAAVYEPVMGLVLQGRKETVLGADSFPMG 71 Query: 91 ANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGIN 150 E LL++ LP + P L +V++ L++L + + + + Sbjct: 72 VGECLLISHDLPVIARVT---KAPYLVLLFDVELDTLRDLYEAMAD--SLPSAAPPRSLA 126 Query: 151 SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFS 210 T ++ A R L + DA +LG + REI Y + T P GG L L+ +H S Sbjct: 127 VHTCDARLVDALHRYLALAGSRTDAAVLGPLVSREIHYRLATAPFGGMLRDLIRHDSHAS 186 Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 I+R + ++ + + + +LA MS S+FH +FK++T++SPLQY K +L +AR + Sbjct: 187 AIARAIAQLRRDFRSPVEIPKLARSVGMSPSSFHKHFKAITASSPLQYRKGLQLLEARRL 246 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + + SAAA VGYESA+QFSR++ R FG +P D Sbjct: 247 LRAGTISVSAAAFDVGYESAAQFSRDYTRKFGASPKHDI 285 >UniRef50_A9AC46 AraC family transcriptional regulator n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AC46_BURM1 Length = 295 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 114/294 (38%), Positives = 161/294 (54%), Gaps = 22/294 (7%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKI 79 + + R + + +L E + VR + P R PV+YEP I+++ G K+ Sbjct: 9 DSADRVRRRMIELHTRLAPDEGDTPAAIDGVRFIRVSRPAPRLPVLYEPSIVVVCQGRKL 68 Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 GY+ ER F YDA +YL + + VD+ + EL + + E Sbjct: 69 GYLGERSFVYDAQQYL---------------------AISIRVDLAVIAELAILLDETLG 107 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL 199 G+ S L + A RLL+ + P D R+LG I+REI Y VLTG G A+ Sbjct: 108 A-AVSEPHGVYSTPLDAPLADAVLRLLETLASPHDTRVLGPSIMREIAYRVLTGAQGDAI 166 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 A + +Q HF I++ L+RI +L VE LA EA MS++ FH FK VT+TSP+QY+ Sbjct: 167 RAALVQQHHFGRIAKALRRIHADLQADLDVETLAREAGMSLAVFHAQFKHVTATSPMQYV 226 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K RLH+AR+M++ +G+ A AAA RVGY SASQFSREFKR FG +PG++ MR Sbjct: 227 KTARLHQARLMMVQNGLGAGAAAARVGYASASQFSREFKRLFGRSPGDEVRAMR 280 >UniRef50_B6R5M8 AraC-family trancriptional regulator n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5M8_9RHOB Length = 262 Score = 232 bits (593), Expect = 9e-60, Method: Composition-based stats. Identities = 108/259 (41%), Positives = 142/259 (54%), Gaps = 2/259 (0%) Query: 56 ETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVP 114 T VMY P I I+F G G++ + F Y Y L P+P E E A+ E P Sbjct: 2 TTATKPRAVMYSPSIRIVFQGLVRGHLGSQSFLYSQQSYAALVSPIPLEIEIVEASPEKP 61 Query: 115 LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLD 174 L + L +DI L EL++ I E E + A LSEE L + RL+ + Sbjct: 62 LYAVNLAIDINVLAELMLLI-EQEPLEFEYGEMLGRPAHLSEEALFSVCRLMQTLNSEEQ 120 Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 +IL RE LY+VL G +L L I+RVL+ + ++ NLSV+Q+A Sbjct: 121 TKILADGYYREFLYHVLKSEYGASLRVLFQNSEKSQGIARVLQVLHEDFSTNLSVDQMAK 180 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A MS+SAFH FK T SPLQY+K+ RLHKAR M++ M AS AA RVGY S SQFS Sbjct: 181 MACMSISAFHAGFKGATGLSPLQYVKSIRLHKARSMMLSQNMSASQAAYRVGYASPSQFS 240 Query: 295 REFKRYFGVTPGEDAARMR 313 REFKR+FG +P ++AA+ R Sbjct: 241 REFKRFFGSSPTQEAAKFR 259 >UniRef50_C0A3K5 AraC family transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A3K5_9BACT Length = 292 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 87/284 (30%), Positives = 144/284 (50%), Gaps = 6/284 (2%) Query: 30 ADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRY 89 D + + + E+ +P + LL + + V Y P +L SG K ++ + F Y Sbjct: 5 RDILRRHCSGESVT-SPIPKLTLLRSDVVNEPSAVSYAPLFCMLASGRKRVWLGRQEFVY 63 Query: 90 DANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 +YL+ + LP + E P G +D + E+L+ + + + + + + + Sbjct: 64 GPRDYLITSAELPLVAQVI---EAPYLGFAFALDPEVIAEILLKLPKADPGR--VPSKAV 118 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF 209 A +E+ A RLL +++RPL I+ I REIL+++L GP + L + + Sbjct: 119 AVARAEDELFDAVGRLLRLLDRPLHIPIMAPMIEREILFHLLQGPHADTIRQLGAPASPL 178 Query: 210 SLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARM 269 S + R + I Y E + V + A A MS FH +F++VT+ SPLQ+ K RL +AR Sbjct: 179 SQVRRGIDWIREHYNETMRVGRAAKAAGMSAPTFHRHFRAVTNLSPLQFQKRLRLEEARR 238 Query: 270 MIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 ++ + A++ A VGYES SQFSRE++R FG P DA+ R Sbjct: 239 RLLAERADAASIAFDVGYESPSQFSREYRRMFGAPPRRDASEAR 282 >UniRef50_C6LKP8 Transcriptional regulator, AraC family n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LKP8_9FIRM Length = 299 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 8/299 (2%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGY 81 E R + + KL KE +P V + E R P + P + I+ G + Sbjct: 1 METAIRTMQKDIRKLSLKEGENQTGIPGVTVYCFEEEKIRMPSVDNPYLYIVLDGMLRLH 60 Query: 82 INERVFRYDANEYLLLTVPLPFECETYA-TSEVPLAGLRLNVDILQLQELLMD-IGEDEH 139 + Y A +Y + + P + + + + + +++ +G D Sbjct: 61 TPSGIMDYMAGQYSVSRIDTPLMGTVLKFSEQRDFLAMSVEF---TVNDVITTVLGLDND 117 Query: 140 FQPSMAASGINSATL---SEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCG 196 + ++ + E ++ + ++L + R + + + K I+RE++Y VL G CG Sbjct: 118 LTEKIMKEQLDRNRMALSDEAVIESVDKLFSGIYRAVPSEFMRKNILREMIYAVLCGSCG 177 Query: 197 GALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 + V I I+ + ++ +VE LA + NMSVS FH F+S PL Sbjct: 178 RQFIQSVVNTRPAEEIYEANSWIKENFRDSFTVESLAEQRNMSVSLFHQKFRSAVGMGPL 237 Query: 257 QYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 Q K RL +AR +++ + + A++ VGYES SQF R++++ FG P ED M+ Sbjct: 238 QCQKRLRLTEARRLMLDERKNVTEASVEVGYESVSQFIRDYRKMFGSAPKEDILNMKKH 296 >UniRef50_UPI00016AE94B transcriptional regulator, AraC family protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE94B Length = 282 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 96/288 (33%), Positives = 147/288 (51%), Gaps = 41/288 (14%) Query: 26 CRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINER 85 + + + L E LP VR+L +RTPV+Y+PGI+I+ G K GY ++ Sbjct: 18 RKRMVSLLLSLAPDEGYNLTALPSVRVLRSNRALSRTPVLYDPGIVIVCQGRKRGYFGDQ 77 Query: 86 VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 ++ YD YL + A Sbjct: 78 LYLYDERHYLACAP-----------------------------------------KRMEA 96 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 + S L + + + R L+ M RPL+A +LG+ ++RE+ + VLTG GG++ ++ Sbjct: 97 PRSMTSTPLDDAMQTSVLRFLEAMHRPLEAAVLGQGLLRELYFRVLTGAQGGSMREALAM 156 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + F I R L+ I Y + L V +LA EA MS+ +FH +FK++T SP+QY+K+ RLH Sbjct: 157 RGQFGRIGRSLRLIHAAYAQPLDVPRLAEEAGMSIPSFHSHFKAITQVSPMQYVKSTRLH 216 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +AR++++ + A AA VGY SASQF+REFKR F +TP +A RMR Sbjct: 217 QARLLMLRHDLTAEAAGHAVGYTSASQFTREFKRLFDLTPAAEAKRMR 264 >UniRef50_B3SEQ8 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEQ8_TRIAD Length = 240 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 129/237 (54%), Gaps = 5/237 (2%) Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMD 133 G K+ ++ V+ Y A + + +PLP + E A+ + P L +++++L E+++ Sbjct: 1 QGEKVCHVGSEVYTYSAGNFFINFLPLPVQTEVVEASEQEPFLSAALGINLVRLAEIILQ 60 Query: 134 IGEDEHFQ---PSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYV 190 I E+ + S S + +++ A RLL V +A ILG II EI + + Sbjct: 61 IERIENQEIQNSSFDTSCVVVGDADADLVDAFNRLLKVSRSEAEAAILGGAIIDEIYFRI 120 Query: 191 LTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 LT G AL L+++ H +S+ + I +++ VE+LA +NMS + F + FK + Sbjct: 121 LTSEHGFALRELLNQYGHIQPVSKAVNYIHANLDKSIQVEELANLSNMSKTTFFNAFKRL 180 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 P QY+K +L +A+ ++ GM+A+ A+ VGY S SQFSRE+KR+FG +P + Sbjct: 181 MHLPPNQYIKGIKLQRAQALLKQ-GMQANEASYHVGYSSFSQFSREYKRFFGFSPSQ 236 >UniRef50_C0A4C8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4C8_9BACT Length = 309 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 120/318 (37%), Gaps = 31/318 (9%) Query: 6 AQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVM 65 A+ NCR +P L CR D + K+ L P + Sbjct: 10 AKVNCRQMPGTL---VFASCCRRWQDLLVKIYT--------------LRQTEDSVIIPSV 52 Query: 66 YEPGIIILFSGHKIGYINERVF-------RYDANEYLLLTVPLPFECETYATSEVPLAGL 118 EP I+ + SG+ + I ER A ++ L T P P+E A E L + Sbjct: 53 AEPFIVWVLSGNAV--IEERELDGEWTANHVAAGDFYLTTSPTPYELRWKAVGEAQLEVM 110 Query: 119 RLNVDILQLQELLMD-IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP--LDA 175 L + + ++ + +G+ SG + LS + + D +P L A Sbjct: 111 HLYLGLPLFRQAAREVLGKAGRRASLREVSGRHDPVLSVFLGQLHREITDSGGKPSLLFA 170 Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTH--FSLISRVLKRIENKYTENLSVEQLA 233 R + + + ++ + G A R S + R+ +E E +++LA Sbjct: 171 RGIAQSVAVHLVRHYADTNTAGTGDAHGLRGGRLPASSLRRITDFMEAHLDEEFRLDELA 230 Query: 234 AEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQF 293 EA MS F F+ T SP +Y R+ AR ++ + VGY S S F Sbjct: 231 REAGMSKFHFCRLFRKTTGLSPSRYFIRLRMEMARRLLRETSRSVIEVGLEVGYSSPSHF 290 Query: 294 SREFKRYFGVTPGEDAAR 311 ++ F+R GV P E + Sbjct: 291 AQVFQREAGVPPSEYRRQ 308 >UniRef50_Q1VVA7 AraC-type DNA-binding domain-containing protein n=2 Tax=Flavobacteriaceae RepID=Q1VVA7_9FLAO Length = 306 Score = 210 bits (534), Expect = 7e-53, Method: Composition-based stats. Identities = 71/292 (24%), Positives = 130/292 (44%), Gaps = 11/292 (3%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE-PGIIILFSGHKIGYINER-VFR 88 K+ L S ++ + + + +E P I + SG KI ++ + F Sbjct: 14 RKIETLVENRTVYSAEFAEMNIYETHKKAKQVYLEFECPIIASMISGRKIIHLKNKATFD 73 Query: 89 YDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLM------DIGEDEHFQ 141 + E ++L + AT + P + L +D ++QE + +I E Sbjct: 74 FLPGESVVLPAKKKMIIDFPDATLDSPTRCMALGIDSQKIQETIDVYQNATEIEESFTLG 133 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLDA-RILGKQIIREILYYVLTGPCGGALL 200 ++ S ++ + ++ ERLL + L +I+E++ +L GALL Sbjct: 134 SNLNLSPLHLNN-NTQVQHLLERLLQTFSSGHKSKDALLDVMIKELILRLLQTNARGALL 192 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 S ++ VLK I Y ++++VE LA +A MS S F+ +FK+ +P++YL Sbjct: 193 DENSYLFDNHRMAFVLKYIREYYKDDITVEDLADKACMSKSHFYKSFKNTLGETPMEYLN 252 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 + RL +A+ +I K S A G+ S+S F +FK+ G+TP + + Sbjct: 253 SERLKQAKKLIRTTSSKLSEIAFSTGFNSSSYFVTQFKKQEGMTPSQFRKSI 304 >UniRef50_C7DDR7 Transcriptional regulator, AraC family n=2 Tax=Rhodobacterales RepID=C7DDR7_9RHOB Length = 217 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 116/211 (54%), Gaps = 3/211 (1%) Query: 97 LTVPLPFECE-TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLS 155 ++ LP T A+ P L L +D+ ++ L + + + P + ++ Sbjct: 2 VSHDLPVVSRITKASVGEPYIALILALDLGVVRSLCNQVADAD--LPEASPQTLSVWQAD 59 Query: 156 EEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRV 215 + L R ++ +D ++LG I+REI Y +L P GG L +++ +H + I++ Sbjct: 60 PKWLGPLTRYAELTGNTMDTQVLGPSILREIHYRLLLSPIGGMLRRMMTADSHANRIAKA 119 Query: 216 LKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDG 275 ++ + N++ ++S+ +LA A MS S+FH +FK+ TST+PLQY K++ L AR +++ DG Sbjct: 120 IQMLRNEFRTSISMAELADWAGMSTSSFHTHFKAFTSTTPLQYQKDFCLIAARTLLVQDG 179 Query: 276 MKASAAAMRVGYESASQFSREFKRYFGVTPG 306 + A VGYES + FSR++ + FG+ P Sbjct: 180 RSVTDTAYAVGYESPTHFSRDYSKKFGLPPS 210 >UniRef50_UPI0001B5740E AraC-like transcriptional regulator n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B5740E Length = 299 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 7/267 (2%) Query: 49 DVRLLY-GETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET 107 + L P Y P + ++ +G K + + + + + + V LP Sbjct: 30 GLGLSRLRTVPGGLAYQRYTPSLSVVLAGRKRSVVGDDDQVWGLDRFFITPVDLPVLSGV 89 Query: 108 YATSEVP-LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 AT E R +D + E+ + + + RLL Sbjct: 90 VATDERYGFLSARWRLDPALVTEVATAMPRTRREPSGRLDR---LGAWTPALADVFARLL 146 Query: 167 DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 +++ P +LG Q RE + +L +LA + H ++ R ++ + + E Sbjct: 147 GLLDEPEHIPLLGPQFARETVLRLLQTTQAPRVLAAI--DAHDPVVPRAVRLLTERIAEP 204 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +++ LAAE + S + FK TS +P+QYLK RL +AR ++ G A+ AA VG Sbjct: 205 WTLDALAAEVSASRATLSRRFKQATSMTPMQYLKRLRLGEARHRMVVRGDSAARAATAVG 264 Query: 287 YESASQFSREFKRYFGVTPGEDAARMR 313 Y SA F+R+++ +G +P DAAR R Sbjct: 265 YRSAPHFTRDYRLVYGTSPAADAARAR 291 >UniRef50_A5FFR2 Transcriptional regulator, AraC family n=3 Tax=Bacteroidetes RepID=A5FFR2_FLAJ1 Length = 307 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 125/292 (42%), Gaps = 19/292 (6%) Query: 36 LKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG-----------IIILFSGHKIGYINE 84 + E SL L+ + + YE + + G KI ++ + Sbjct: 12 HLSNEKSLKTLVENRSVYTLNQCELNLFETYESSNLVPLKFNDFVVTSMLRGKKIMHLFD 71 Query: 85 RV-FRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQP 142 F Y E +++ + + + A+ E P L L +D ++ E L + E + Sbjct: 72 EPAFDYLPGETVVVPSNIEMKIDFPEASRENPTQCLALAIDNTKINETLNFLNERYPKEG 131 Query: 143 SMAASGINSATL----SEEILCAAERLL-DVMERPLDARILGKQIIREILYYVLTGPCGG 197 + A +N + ++ +L+ + M + L ++E+L ++ Sbjct: 132 TDAFWQLNYQNYFFYNNVDLAATINKLIKECMSTSITKDALADLTLQELLIRIIQTQTAK 191 Query: 198 ALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQ 257 ++ + Q++ I V + I EN++++ L+ +A MS ++F+ FK SP++ Sbjct: 192 SIDEGIVIQSNNP-IYEVTEFIRLNLKENINLKILSEKACMSTTSFYRFFKRELGMSPIE 250 Query: 258 YLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 Y+ N ++ A+ ++ + G++ + G+E A+ F R FK++ G+TP + Sbjct: 251 YILNEKIKHAKKLLRNPGIQINEVCYLSGFEDANYFIRLFKKHEGITPKQYQ 302 >UniRef50_C6VUN3 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUN3_DYAFD Length = 308 Score = 200 bits (508), Expect = 8e-50, Method: Composition-based stats. Identities = 50/269 (18%), Positives = 117/269 (43%), Gaps = 11/269 (4%) Query: 50 VRLLYGETPFARTPVMYEPGIII--LFSGHKIGYINERV-FRYDANEYLLLTVPLPFECE 106 + L P A P+ + P ++ + G K+ ++ ++ F Y E +L+ + + + Sbjct: 35 LNLFETLQPSALVPLTF-PDFVVTSMLRGKKVMHLFDQPGFDYLPGETVLVPANVTMKID 93 Query: 107 T-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCA 161 A + P + L +D ++Q+++ + E + + + E+ Sbjct: 94 FPEAQRDNPTQCIALAIDHTKIQQIVDRLSETYPREGRQQFWSLQHNQYHFLNNIELAQT 153 Query: 162 AERLLDVME-RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 +L+ + L IL ++E++ +++ A + ++ V+ I+ Sbjct: 154 LNKLIKICSGSALGKDILADLTLQELIVHIIQTQHLAATDDAAYQHEDNP-LAFVVNYIK 212 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 E + VE L+ +A MS ++F+ FK S SPL ++ ++ KA+ ++ H S Sbjct: 213 ANINEKIQVEDLSEKACMSRASFYRAFKREFSISPLDFILREKIKKAKQLLSHTKDSISD 272 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDA 309 ++G+ + F R+F++ G++P + Sbjct: 273 ICYQLGFSDLNYFGRQFRKSEGISPSQYR 301 >UniRef50_A6UK12 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Rhizobiaceae RepID=A6UK12_SINMW Length = 331 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 14/270 (5%) Query: 50 VRLLYGETPFAR--TPVMYEPGIIILFSGHKIGYINERVFR-------YDANEYLLLTVP 100 V++ P + EP I+ + SG I ER ++ L P Sbjct: 66 VQVYSRLKKQEPFLVPAVAEPLIVWVISGEAIV--EEREIDRDWVTNTVTVGDFFLTRSP 123 Query: 101 LPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 P+E AT P + L + + + + D+ SG LS + Sbjct: 124 TPYEMRWRATGAAPFQVMHLYLSVPLFERVAKDLLGRAARPALRDVSGGKDEQLSHLLAL 183 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 + L +++ + + + + +++ + R + +E Sbjct: 184 IHQELTA---EGKGSQLFIQGLAQSLAVHLIRNYASNGSEGGRQTALPGFKLRRAVAYLE 240 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 E ++ +L+ MS F FK T SP +Y R+ +A++++ Sbjct: 241 EHLAEPFNLAKLSEAVGMSEFHFSRLFKKATGLSPSRYFIRQRVARAQLLLQETDTSIIK 300 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAA 310 M VGY S S F++ F+R G+ P Sbjct: 301 IGMSVGYSSPSHFAQVFRRETGLPPSHYRR 330 >UniRef50_A6ES38 AraC-type DNA-binding domain-containing protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ES38_9BACT Length = 306 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 129/297 (43%), Gaps = 11/297 (3%) Query: 27 RLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE-PGIIILFSGHKIGYINE- 84 A K+ L + + ++ + + + ++ P I + +G KI ++NE Sbjct: 8 HKAARKLYTLVENRTTYNAAYSELNIFETHKVANQVSLTFDFPVIASMLTGKKIMHLNEL 67 Query: 85 RVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS 143 F + E +++ + AT E P L L +D ++ E+ E + Sbjct: 68 SPFEFLPGESVVMPAHQEMVIDFPIATKEKPTQCLALGIDAEKIHEVAYKFNEQILLKDE 127 Query: 144 MAASGINSATLSE-----EILCAAERLLDVMERPLDA-RILGKQIIREILYYVLTGPCGG 197 + T S E+ ERL+ + + +L +I+E++ +L Sbjct: 128 KDVWTLEEGTASHLTNQIEVNYLIERLVTTFTKNTASKDVLLDLMIQELIVRLLQTKAKH 187 Query: 198 ALLALVSRQTHFSLISRVLKRIENKY-TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPL 256 ++L + + I V+K I +N++V+QLA +A MS S+FH FK+ SP+ Sbjct: 188 SILNDHLQIFSDTRIGHVVKFIRENLTDKNINVDQLAEKAYMSTSSFHKKFKNTLGISPI 247 Query: 257 QYLKNYRLHKARMMI-IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 ++ + ++ A+ ++ + M S A + G+ + S F+R+FK+ +TP + + Sbjct: 248 DFINSEKIKFAKKLMKRNKKMLISEIAYKSGFNNVSYFNRQFKKLEFMTPQQFKISL 304 >UniRef50_C3X327 AraC family transcriptional regulator n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X327_OXAFO Length = 289 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 97/277 (35%), Gaps = 10/277 (3%) Query: 49 DVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE-- 106 + L + E ++I+ +G YI V Y A + L+ +P Sbjct: 15 SLSLAHFPHLSYPLHCHEEYELVIVTAGTGREYIGHAVENYRAGDMTLIGPDIPHLHLCD 74 Query: 107 --TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER 164 T A L + + I E + S + + Sbjct: 75 SLTGKNGSEESACEILYFSPSLFPDNMDGIAEYRAIAAVLEKSRRGVRYSDPALTRQIRK 134 Query: 165 LLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ----THFSLISRVLKRIE 220 + +++ + + +L + + + R + V + + Sbjct: 135 QVQRLDKGQGIGRIRWLLA--LLDTLARSQETSLIASGPVRNGTALRRQETVDTVCRYLR 192 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 + ENL ++ +A EA M+ SA +F+ T + +L R+ A +++ + SA Sbjct: 193 EHFRENLCLQAIAREACMNPSALCRHFRQRTGKTLFAFLAGIRIENACRLLLETRLSISA 252 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 A G+ + S F+R+FK G TPGE +R+ G Sbjct: 253 IAWETGFANLSHFNRQFKSLTGQTPGEYRKNIRSGVG 289 >UniRef50_D2QFH9 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QFH9_9SPHI Length = 311 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 128/310 (41%), Gaps = 8/310 (2%) Query: 15 KKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYE-PGIIIL 73 KKL + E +++ L + +LS ++ L + + P + + Sbjct: 2 KKLGKLATNEAVSAWGARLDTLVENKLTLSHDAAELHLYETFQQAQLIQLRFNAPVMTSM 61 Query: 74 FSGHKIGYINE-RVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELL 131 SG K+ ++ E F Y E LLL + + AT+ P L L + ++E + Sbjct: 62 LSGRKVMHLREMEPFNYQPGESLLLPSDRLMQIDFPDATTHDPTRCLALTISDEFIRETI 121 Query: 132 MDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLDVMERPLDAR-ILGKQIIREI 186 ++ E+ + +N+ EI ++L+ + + K +RE+ Sbjct: 122 AELNEEVPRVELVDEWQLNTDNYLLQNDPEISSLTDKLIRLFRENNPFKTFFIKNTLREL 181 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 + + LL S+ T + ++ ++ I + T NLS+++L+ +A +S S F Sbjct: 182 IVRLSQTQVRTGLLHQTSQHTTTNRLAYIVSYIRDNITRNLSIDELSDKACLSQSHFFRL 241 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FKS SP Q++ R+ +A+ ++ + A G+ S + FS F+ + P Sbjct: 242 FKSELGISPAQFILTERIRRAKTILSDPAKSVTDACYESGFNSVTHFSNAFRSIEHICPR 301 Query: 307 EDAARMRAMQ 316 + ++ + Sbjct: 302 DFKRQLAGLN 311 >UniRef50_Q1QUA4 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QUA4_CHRSD Length = 303 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 98/268 (36%), Gaps = 13/268 (4%) Query: 53 LYGETPFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 + P Y P + ++ ++ + + R+ +L+ +P + Sbjct: 30 HCHDFPAPIARWNYHPEYELHLIRYSEGNYFVGDYIGRFGPGNLVLVGPNVPHAWLSDPD 89 Query: 111 SEVPL---AGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 + + L L+ ++ E + S A EE A R + Sbjct: 90 DSRSVIKGRDVVLQFKGEWLEHMMALCPELNCLSTLIEDSRQGVAFQGEE----ATRCGE 145 Query: 168 VMERPLDARILGKQIIREILYYVLTGPCGGALLA----LVSRQTHFSLISRVLKRIENKY 223 ++ + G+ + + L+ L + L + + + +L+ I + + Sbjct: 146 LLITMGEQDHAGRLLTMLTILRGLSQCDYATLSSREYGLEATGVSSAQVDAILRYIHDHF 205 Query: 224 TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAM 283 E L + LAA MS S+F FK T + + +L+ R+ A +++ + Sbjct: 206 HEELRMSALAARNGMSPSSFSRFFKHATGDTFVAFLRRIRIGHACQLLLEGRQSIADICF 265 Query: 284 RVGYESASQFSREFKRYFGVTPGEDAAR 311 +VGY + S F+R F+ G+TP + Sbjct: 266 QVGYNNLSNFNRHFRELKGMTPRQYQQS 293 >UniRef50_Q3ADL3 Transcriptional regulator, AraC family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADL3_CARHZ Length = 287 Score = 197 bits (501), Expect = 4e-49, Method: Composition-based stats. Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 13/252 (5%) Query: 70 IIILFSGHKIGYINE-RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 I + G K INE Y + +L + E L + VD + Sbjct: 40 ICTILEGKKQVSINELERVEYTKENFAILAPN----SKVDLNIENKTKALVIEVDNNVVN 95 Query: 129 ELLMDIG-EDEHFQPSMAASGINSATLSEEILCAAERLLDVME-RPLDARILGKQIIREI 186 +L+ I E + + + +EE+L +R++ + + L I+E+ Sbjct: 96 QLIERIQFELGYEEIKKITNYFFLCNFTEEMLETYKRIVRTLNSQEKGKEFLLDLYIQEM 155 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 LY +L ++ V + I+ +L I Y +N+ V +A M F Sbjct: 156 LYEILKFRGAKEIINSVKN----ARINNILSYINESYHKNIKVADIAKIFGMEEYEFCRY 211 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK+ T +P +Y+K RL KA+ ++ + + VGYE+ S F +EFK+ F +TP Sbjct: 212 FKTYTCKTPKEYIKELRLKKAKELLQYQ--SVTETCYEVGYENISYFIKEFKKAFQMTPK 269 Query: 307 EDAARMRAMQGN 318 + + + + Sbjct: 270 QYQKEAKNNKKD 281 >UniRef50_A8SBA6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBA6_9FIRM Length = 286 Score = 196 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 12/242 (4%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQ 126 I ++ SG I + R + + A + P + + Sbjct: 42 HYLIHLVVSGKGIFEVGGRTWEVSEGDLFFARPSQ--LIRYTADEQQPWEYSWVGFNGAC 99 Query: 127 LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREI 186 +L + P + ++ + + + A + + Sbjct: 100 AHKLAAQL-------PFTDDAPVHHTSDPDGMRAALTNIYSSRGLQPQDEAAMVGYLYLF 152 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 + ++ G + + + +K I+ Y+ ++S++ +A +S S + Sbjct: 153 IAALMRETSAGKPH---TASSSSQYVLNAIKYIQFNYSHDISIDDVAKSVGVSRSHLYRV 209 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 F SP+ YL YR+++A ++ + + A+ VG+ FSR FKR GV P Sbjct: 210 FMLNVGKSPIDYLTEYRINEACKLLRAGNLSIAEVAVSVGFFDQFYFSRVFKRAKGVPPS 269 Query: 307 ED 308 + Sbjct: 270 KY 271 >UniRef50_A8SRM1 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SRM1_9FIRM Length = 296 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 103/296 (34%), Gaps = 23/296 (7%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETP----FARTPVMYEPGIIILFSGHKIGYINE 84 + +K+ +EN L +V P Y I + G Y+ Sbjct: 1 MENKIVMEFPQENDTDLYL-NVFGHSITEPLHKAGPAVKTFY--LIHFVLEGEGDFYVKG 57 Query: 85 RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSM 144 + + L+ P + P + + L IG ++ Sbjct: 58 AHYHLKKGQGFLIEPDTPAT--YISDEHHPWRYVWFGFSGRCAHDTLSSIGLTQN----- 110 Query: 145 AASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS 204 I + +++ +L + + Y+ A + Sbjct: 111 --QPIFTCEDGDKLKKYVFDMLA-----HNTSGHADHYRLMGMLYLALSVIANAQKDKLE 163 Query: 205 RQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRL 264 + + ++ + I+N Y+ + VE+L+ ++ S F FK T SP++YL+N+R+ Sbjct: 164 APSGNAYVNHAISYIQNHYSMPMKVEELSDYVGINRSYFSDLFKQYTGMSPVKYLQNFRI 223 Query: 265 HKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA--ARMRAMQGN 318 KA+ M+ + + A GY+SA F + F++ G++P R R + Sbjct: 224 TKAQHMLTISELSVESIAFSCGYQSAEAFHKIFRKTTGLSPNAYRLGKRQRTLSSQ 279 >UniRef50_D1PMJ1 Transcriptional regulator, AraC family n=2 Tax=Ruminococcaceae RepID=D1PMJ1_9FIRM Length = 285 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 84/252 (33%), Gaps = 12/252 (4%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQ 126 I ++ +G + + + L A P + + Sbjct: 42 HYLIHLVVAGKGVYQVGGVSHTLQEGDLFLAKPNQ--LITYAADETDPWEYYWVGFNGAC 99 Query: 127 LQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREI 186 +L+ P ++ + + A + L + Sbjct: 100 ANKLVQQ-------TPFSDLHPVHHCKDPQAVREALYNIYLSRGPEPQCEALMTGYLYIF 152 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 + +++ + + +K I+ Y+ ++SV+ +A +S S + Sbjct: 153 MAHLMKEARDAM---PNVGSSSSQYVLSAIKYIQFNYSHDISVDDIAKAVGVSRSHLYRV 209 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 F + SP+ YL NYR+ +A ++ + + + A+ VG+ FSR FK+ GV P Sbjct: 210 FMANVGQSPIDYLTNYRISEACSLLKNSNLSIAEIAVSVGFFDQFYFSRVFKKVKGVPPS 269 Query: 307 EDAARMRAMQGN 318 + A + Q Sbjct: 270 KYLATLEKEQSK 281 >UniRef50_A3HZK9 AraC-type DNA-binding domain-containing protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HZK9_9SPHI Length = 307 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 111/271 (40%), Gaps = 9/271 (3%) Query: 50 VRLLYGETPFARTPVMY-EPGIIILFSGHKIGYINERV-FRYDANEYLLLTVPLPFECET 107 + + +++ + + + G K+ ++ ++ F Y E +++ + + Sbjct: 35 LNIFETHQQADDVNLVFGDLVLTTMLKGKKVMHLFDKPGFEYLPGESVIVPPNEVMKIDF 94 Query: 108 -YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCAA 162 A + P + L++ ++ + E + G++ + ++++ Sbjct: 95 PEAQWDNPTQCIALSISKEMIEATFNLLNEKFPDKVITKDWGLDLSYFHLINTQDLSEII 154 Query: 163 ERLLDVM--ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIE 220 R + + + + ++ ++E+L + L + ++ V++ I+ Sbjct: 155 NRFVRIGVKDGSKEKDLIATLALKELLIRLSQTQARDMLEKTYKELASGNRMAHVVEYIK 214 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 E +S++ LA EA MS + F +FK +P++++ + RL+ A+ ++ + Sbjct: 215 KNIRETISLDDLAGEACMSKAHFLRSFKQELGLTPMEFVLHERLNLAKQYLLLGNHQIQE 274 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 G+ + + F R FK+ FG+TP + Sbjct: 275 VCYMAGFRNITYFIRAFKQEFGLTPKVFQTK 305 >UniRef50_C0ERJ9 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ERJ9_9FIRM Length = 294 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 108/282 (38%), Gaps = 16/282 (5%) Query: 36 LKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYL 95 + + L + L + E II++ G I ++ + A + + Sbjct: 20 HTPDDFPYNTYLCSIPL---DFQSVNLHWHDEVEIIVIKKGSGIVSVDLTTYSVSAGDII 76 Query: 96 LLTVPLPFECETYATSEVPL-AGLRLNVDILQLQELLMDIGEDEHFQPSMAAS------G 148 + LP + + + + + L+ D+ D+ QP + S Sbjct: 77 FV---LPGQLHAISQKDNEIMEYENILFKSSLLKSSGYDLCNDKFIQPLFSGSLNICPVI 133 Query: 149 INSATLSEEILCAAERLLDVME-RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 N ++ A + + + RP ++ K + +ILY +++ + + Q Sbjct: 134 NNQTPYYPPVITAINEIDHLCDLRPYAYQLSIKAHLFQILYTLVSNCGQNKIKPI--NQK 191 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 I +L I N + EN+++E +A S S F FK S +QYL +YRL A Sbjct: 192 SLKKIKTILSYIANNFQENIAIEDIANYCFYSKSYFMKFFKETMGVSFIQYLNDYRLEIA 251 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 ++ A G+ + S F+R FK+ +GV+P + Sbjct: 252 AELLTTTTDNILDIAFATGFNNISYFNRCFKKKYGVSPRKYR 293 >UniRef50_B5YFJ6 Transcriptional regulator, putative n=2 Tax=Dictyoglomus RepID=B5YFJ6_DICT6 Length = 287 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 6/251 (2%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 E I+ + G Y++ ++ + EYL + + G + Sbjct: 39 HWHNEFEILYMERGIGKFYVDGYEYKLNEGEYLFVNSG---SIHSGLEMIKRSIGYAIVF 95 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEE-ILCAAERLLDVM-ERPLDARILGK 180 D+ L D + E+F P + + L++E I R+++V E+ + K Sbjct: 96 DLRLLYSEEPDYCKHEYFLPLINKRYHIPSNLNDEHIRNDICRIIEVFKEKSYGYELYIK 155 Query: 181 QIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSV 240 ++ +I + V I VL I Y +NLS+++L+ + +MS Sbjct: 156 SLLFDIFWRVFK-YYAERRNQDGRLGYKIERIKDVLNYINQNYNKNLSLDELSRQVDMSK 214 Query: 241 SAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRY 300 FK SP++Y+ R+ KA ++I+ M S A G+++ S F + FK+Y Sbjct: 215 FYLCRLFKESLRMSPVEYINKVRVDKAMELLINTDMSVSEIAFECGFDNISYFIKVFKKY 274 Query: 301 FGVTPGEDAAR 311 TP + + Sbjct: 275 MHTTPLKFRKQ 285 >UniRef50_Q1QTE9 Transcriptional regulator, AraC family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTE9_CHRSD Length = 318 Score = 195 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 108/308 (35%), Gaps = 17/308 (5%) Query: 12 IIPKKL-RDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI 70 P L R RL+ +++ +G ++ + P + E + Sbjct: 15 PSPGTLERLTDTPRTRRLIENRI--------CYAGPHAELSVYDTWWPARDVALSAERVL 66 Query: 71 -IILFSGHKIGY-INERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQL 127 + G K+ + E + E +L + A + P + +++D ++ Sbjct: 67 YCGMLKGRKVMHGATEEPETFLPGESFVLAPYQEVRIDFPEARPDAPTTCMTIDLDPARV 126 Query: 128 QELLMDIGEDEHFQPSMAAS----GINSATLSEEILCAAERLLDVM-ERPLDARILGKQI 182 L + + + ERL+ + E D L Sbjct: 127 HALSERLNQSHPRDKELGEWHYAPRALHVPHGPSTQSLIERLMGLFRENHPDRDALIGLG 186 Query: 183 IREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 I E++ +L LLA + ++ L +E + L QLA EA MS + Sbjct: 187 IDELIVRLLRTQSRELLLADARQTPPRHGLAAALAWLERHPEQPLDGAQLAREACMSKAR 246 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 + F+ +P +Y + RL +AR + + +GY S S F+R FK +G Sbjct: 247 LYRLFQREVGCTPGEYQQRLRLARARQWLRDADAPITEICYSLGYRSLSHFTRRFKAAYG 306 Query: 303 VTPGEDAA 310 +TPG+ Sbjct: 307 LTPGDYRR 314 >UniRef50_C2KAS7 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAS7_9FLAO Length = 311 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 97/255 (38%), Gaps = 10/255 (3%) Query: 64 VMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN 121 Y P +I + G I + + + +L+ LP T ++ + + Sbjct: 56 WHYHPEVELIFVCKGSGKRQIGSSITYFSEGDLVLIGSNLPHCGLTNESTHNEYE-MVIQ 114 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQ 181 L E + DI E + + S EE+ + + M L + Sbjct: 115 FKPDFLGEPIWDIPEMQRISALLEKSKAGI-VFGEEVKKRIGKEITEMHETSSLDKLCRF 173 Query: 182 IIREILYYVLTGPCGGALLA----LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 + IL + L A L ++ I+ + +++ + E +++E++A AN Sbjct: 174 LK--ILDELSVTQDYRILNAGKYYLQTQVEDNERINLIFNYVKDHFKEAITLEEVADLAN 231 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 M V +F FK +T+ + Q++ YR+ A ++ + + G+ + S F+R F Sbjct: 232 MKVPSFCRYFKKITNKTFTQFVNEYRITHALKLLAEQPLSITEVCFESGFNNFSYFNRTF 291 Query: 298 KRYFGVTPGEDAARM 312 K Y +P + Sbjct: 292 KEYIQKSPSQYRKEF 306 >UniRef50_A4XJ70 Transcriptional regulator, AraC family n=2 Tax=Clostridia RepID=A4XJ70_CALS8 Length = 286 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 6/263 (2%) Query: 52 LLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATS 111 + E E I+ L G ++ + + ++L + + Sbjct: 26 IFVHENNTLLPHWHDEFEIVYLEKGTASFRVDGKEYFLGPKQFLFVNCGSIHGGKAEDNP 85 Query: 112 EVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL-SEEILCAAERLLDVM- 169 E P + + L DI + ++ Q + + E ++ V Sbjct: 86 E-PY---AIVFSLSMLFSEGPDICKSKYLQSVSERKLLVQNSFEDEHTRELISNIITVWK 141 Query: 170 ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 E+P +L K + I YY+ A I L I + Y+ ++ + Sbjct: 142 EKPKGYELLVKGYLFVIFYYLFNKRYVTASSTDRELDLKLEKIKSALDFINSNYSSDIDI 201 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 + LA AN+S F FK +T +P+ Y+ +R+ KA +I + + S A VG+ + Sbjct: 202 DLLAKLANLSKFYFCRLFKEITHLTPVDYINKFRVEKAIELIKNTNLSISEIAFEVGFNN 261 Query: 290 ASQFSREFKRYFGVTPGEDAARM 312 S F + FK Y GVTP + + Sbjct: 262 VSYFIKVFKEYVGVTPFKYKKNV 284 >UniRef50_Q7CUK1 Transcriptional regulator, AraC family n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CUK1_AGRT5 Length = 297 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 53/273 (19%), Positives = 100/273 (36%), Gaps = 5/273 (1%) Query: 49 DVRLLYGETPFARTPVMYEPGI--IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 L P Y P + + + ++ + V Y + +LL LP + Sbjct: 15 SWLLFDRRLPEFPFNWHYHPEFELTLTLNSAGMRFVGDSVENYGDGDLVLLGPNLPHAWQ 74 Query: 107 TYATSEVP--LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAER 164 ++ P + ++ L+ E P + SG + + ER Sbjct: 75 SHGLINAPGVHRAVVCWFTRDWIEGLIALTPELSAITPLLVESGHGICFGEDALAKVGER 134 Query: 165 LLDVMERPLDARILGKQIIREILYYVL-TGPCGGALLALVSRQTHFSLISRVLKRIENKY 223 L + + + +IL + L V P + + + + RVL I Y Sbjct: 135 LATLHKIAPEQQILTLLGVLVDLARVSDRRPLSAGEVTASTAPRDRARMQRVLNHIHAHY 194 Query: 224 TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAM 283 +S++ L+ A++S S FK T + QY+ R+ A ++ + + A Sbjct: 195 IGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQYIGQLRVGGACRLLAQTDLSLARIAE 254 Query: 284 RVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 G+ A+ FSR+F+ G+TPG+ + Q Sbjct: 255 ETGFSDAAHFSRQFRAARGMTPGDYRRQFDQTQ 287 >UniRef50_B0MKI2 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKI2_9FIRM Length = 284 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 94/265 (35%), Gaps = 10/265 (3%) Query: 53 LYGETPFART----PVMYEPGIIILFSGHKIGYINERVFRYDANEY-LLLTVPLPFECET 107 F R E II + SG+ +++ R DA L++ + Sbjct: 22 YRVTENFPRYNMIPHWHNECEIIYVRSGYFELFLDGHTHRIDAGCCSLIIGGSM---HGG 78 Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 L ++ L + + SA SE A + Sbjct: 79 TPKDNCRYDCLVFDMAALLKSSQICTLHLQPIINHERRFITFFSAD-SEPAKDAKAVIDA 137 Query: 168 VMERPLDARILGKQIIREILYYVL-TGPCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 ++E+ + +L +++ + S V+ IE Y +N Sbjct: 138 MLEKEPGYEFTVPGRLLCMLGHIVARQEHYQSGETAASDIKKVRRFKNVISYIEQNYRKN 197 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 +++E+LA E M+ + F FK T +P++YL +R+ A +I K AM+ G Sbjct: 198 ITLEELANECGMNRNYFCRAFKEYTGKTPVEYLNYFRIESACELIASTDEKLIDIAMKCG 257 Query: 287 YESASQFSREFKRYFGVTPGEDAAR 311 + S F + FK GVTP + R Sbjct: 258 FNDYSYFIKVFKSMKGVTPRDYCRR 282 >UniRef50_C9XX01 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XX01_CROTZ Length = 306 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 96/284 (33%), Gaps = 9/284 (3%) Query: 36 LKNKENSLSGLLPDVRLLYGET--PFARTPVMYEPGIIILFSGHKIGY----INERVFRY 89 + + + V+L+ E P P + EP ++ + SG E R Sbjct: 24 IASNDGMPESGASLVQLIRRERDNPGVTVPAVAEPLLVWIVSGQAQVSEREGAGEWETRL 83 Query: 90 -DANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 + L P++ P + + + + L + + Q + Sbjct: 84 ARPGTFYLTATTTPYDMRWTLAEGKPFTVMHIYLALTLLDDAFRLCHGIAYAQGEIDDVA 143 Query: 149 INSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT-GPCGGALLALVSRQT 207 ++ +++L + + ++ A IL + +Y V G G Sbjct: 144 ADADPHLDKLLGWCWQEVAHPQKGSGA-ILAGALKSLAVYLVRHYGRARGERGTARPHAL 202 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 + +V + ++ + LA MS FK T SP ++ + R+ +A Sbjct: 203 PAWKLQKVKQHLQANLAAPFHLPTLAQMCGMSSWHLSRQFKQATGMSPSEWFIHQRIQRA 262 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 ++ + A VGY S S FS+ F+R G+ P R Sbjct: 263 CRLLRETSLPVIDIACEVGYASHSHFSQVFRRKTGMQPAAYRRR 306 >UniRef50_A1B409 Transcriptional regulator, AraC family n=5 Tax=Alphaproteobacteria RepID=A1B409_PARDP Length = 294 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 61/272 (22%), Positives = 104/272 (38%), Gaps = 18/272 (6%) Query: 58 PFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLP--FECETYATSEV 113 PF Y P I ++ + YI + V + + ++ LP + + V Sbjct: 24 PFRTVRWHYHPEYEIHLVVATSGTFYIGDHVGSFRPGQLIMTGPNLPQNWISDIPPGEAV 83 Query: 114 PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG---INSATLSEEILCAAERLLDVME 170 PL L + + E + E + P + S + S + ERL++ Sbjct: 84 PLRSLVIQFPEAFIDEASTAMPEMQALGPLLERSRRGLLFDDATSARVRPLMERLVEA-- 141 Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALV----SRQTHFSLISRVLKRIENKYTEN 226 R L + EIL + P L +L + H I+R L + TE Sbjct: 142 --QGLRRLA--LFWEILDLLANAPEYEVLASLSFELDLTRIHDGGINRALGYLREHLTEQ 197 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH-DGMKASAAAMRV 285 + +LA S SAF FK T T+ ++Y R+ A M++ +K + V Sbjct: 198 IEEGELAEMVGQSQSAFSRAFKRHTGTTLVRYRNQLRVDLACQMLLTDPDIKVAEICYEV 257 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 G+ + S F+R F + G++P + A A + Sbjct: 258 GFSNLSNFNRHFLKLKGMSPSQFRATFAAQKA 289 >UniRef50_A5Z9N2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z9N2_9FIRM Length = 293 Score = 191 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 110/286 (38%), Gaps = 14/286 (4%) Query: 35 KLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEY 94 K + + L + L + E +I++ G + +N + +A + Sbjct: 14 KHTPNDFPYNTYLCSIPL---DFKSVNLHWHNEVELIVIKKGQGLVNVNLVTYTVNAGDV 70 Query: 95 LLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL 154 + + S + + L+ D+ D+ QP ++ + + Sbjct: 71 VFVFPGQLHSISQKDYSIMEYENIL--FKSSLLKSSGYDLCNDKFIQPLLSGNLNIYPVI 128 Query: 155 S------EEILCAAERLLDVME-RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQT 207 + + + + + + RP ++ K + +I Y +++ + + + Sbjct: 129 NSNFDFHDSLYSLINEIDKLCDKRPYAYQLAVKSYLFQIFYLLISNCGLNQIKPISKKAL 188 Query: 208 HFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKA 267 I +L + + +N+S+E++A S S F FK S +QYL +YRL A Sbjct: 189 --EKIKTILSYVAEHFQDNISIEEIAGHCFYSKSYFMKFFKETMGMSFVQYLNDYRLEVA 246 Query: 268 RMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 ++ A+ G+++ S F+R FK+ +G+TPG+ R Sbjct: 247 AKLLTTTSDDIINIAINTGFDNLSYFNRCFKKKYGITPGKYRKDAR 292 >UniRef50_A1ZYI4 Putative transcriptional regulator n=2 Tax=Bacteroidetes RepID=A1ZYI4_9SPHI Length = 303 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 116/291 (39%), Gaps = 8/291 (2%) Query: 33 VNKLKNKENSLSGLLPDVRLLYGETPFARTPV-MYEPGIIILFSGHKIGYINE-RVFRYD 90 + L + S + ++ + + + +P + + +G KI Y + F + Sbjct: 13 LETLVENQTSYTLNNAEMHVFETHQQAEKVALQFKQPILASMLTGKKIMYFEHTKSFDFL 72 Query: 91 ANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 E L+L + A+ + P L + ++ +++++ + E+ I Sbjct: 73 PGESLILPGNETMCIDFPEASLQKPTRCLAMAINEDKIKKIAALLNENMPKIDGNEWRFI 132 Query: 150 ---NSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 T I +RLL + E I +++E++ +L + V Sbjct: 133 DFNFHFTNDVAIHGIIQRLLFLFTENHPSKDIFADFMLKELIIRILQKENREHF-SSVQS 191 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 Q ++ V+K I+ + LS++ L+ + +MS S F+ FK+ SP ++ + R+ Sbjct: 192 QPDDHRLTYVIKYIKENLDQPLSIQHLSDQVHMSESNFYRVFKNELGVSPTDFINDERIK 251 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 A ++ K + G+ S S F+R FKR +P E ++ + Sbjct: 252 LATRLLHDPHKKIKEVYLECGFNSMSYFTRLFKRKKKASPSEFQRKLTQKK 302 >UniRef50_UPI0001C353D2 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C353D2 Length = 286 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 6/256 (2%) Query: 57 TPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLA 116 E +I + SG INE + LL+ Y + Sbjct: 30 QYAMPYHWHEELELIHIISGTFHVTINETTRNAVPGDILLVNSGGLHGGTPY---DCVYE 86 Query: 117 GLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDA- 175 L V +L Q + Q + A I ERL +M+ + Sbjct: 87 CLVFPVSLLSSQTYASEFLNRLDRQDLILDEYF-PAGDDTAIHSLLERLFALMQDSDEGG 145 Query: 176 RILGKQIIREILYYVLTGPCGGAL-LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 ++ ++ + + +L A + +S + L+ VL IE YTE +++ +LA Sbjct: 146 KLQCLGLLYQFMGLLLQDRRYTASDKSDLSTHRNIYLLKNVLNYIEAHYTEKITLHELAR 205 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 A MS F H F +T +P+ Y+ YR+ +A ++ G + AM G+ S F+ Sbjct: 206 TAGMSSKYFCHFFSEMTGRTPIDYVNYYRVERACCLLAGIGHSITDIAMLCGFNDVSYFT 265 Query: 295 REFKRYFGVTPGEDAA 310 R FK+Y G++PG+ Sbjct: 266 RAFKKYKGISPGQYLK 281 >UniRef50_Q7UYE3 L-rhamnose operon transcriptional activator n=1 Tax=Rhodopirellula baltica RepID=Q7UYE3_RHOBA Length = 290 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 107/295 (36%), Gaps = 15/295 (5%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFAR-TPVMYEPGIIILFSGHKIGYINERVF 87 + + + LK ++ P V + + I+I+ G + E + Sbjct: 1 MPEMIPTLKKEDWFHPDGFPIV-VERRDPQEPFGLHCHEFAEIVIITGGKGVHITGEDSY 59 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDE--------H 139 + ++ P + L+ + + D L+L + D+ Sbjct: 60 ELVTGDTFVIGGDRPHDYLNMDQ----LSLINILFDPLELPLSIGDLQSLSGYHALFTLE 115 Query: 140 FQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG-KQIIREILYYVLTGPCGGA 198 + L+ L R ++ +++ L R G + + + ++T Sbjct: 116 PAWRKRHQFTSRLQLNPAELIETLRYVESLDQELKQRSAGFRTMATLTMLQLVTFLSRCY 175 Query: 199 LLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQY 258 + I+ + I+ + +S++ L + MS F F+ TSP++Y Sbjct: 176 IRTRNPESKKLLRIAEAISHIQRHFDRPISLDDLVEISGMSRRNFIRTFEGTMETSPIKY 235 Query: 259 LKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 L R+ +A ++ + A VG+ ++ FSR+F+ + G++P E +MR Sbjct: 236 LIQVRIQEASRLLRSTDRSITDIAFDVGFSDSNYFSRQFRTHLGLSPREYRKQMR 290 >UniRef50_C6W740 Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W740_DYAFD Length = 288 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 55/285 (19%), Positives = 102/285 (35%), Gaps = 9/285 (3%) Query: 40 ENSLSGLLPDVRLLYGETPFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLL 97 E R+ E P Y P + ++ I Y+ + ++A + +LL Sbjct: 6 EAFQPLPESSFRIFGYEVKEFDAPWHYHPEYELTVILQSEGIRYVGNSMESFEAGDLVLL 65 Query: 98 TVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEE 157 LP + S P + + + + +++ E + + + + ++E Sbjct: 66 GPNLPHCWKNTPDSVGPASSIVVQWPAEFMGSGWLNVEEFKSIRRLLQLATQGV-RFNQE 124 Query: 158 ILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV----SRQTHFSLIS 213 + +L M L K EIL + T L I+ Sbjct: 125 VSARVLPMLAAMLDMQPFPRLMK--FLEILELLATVKSIHLLCEQGFTHPLNYEDNQRIN 182 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 V I Y E +++ LA +MS +F F +L YR++ A M+I Sbjct: 183 TVYNYIREHYAERITLATLAGLVHMSEESFSRFFSRTMQKPLFTFLNEYRINMASKMLIE 242 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 M+ + + GYES F R+F+++ G+TP + R + Sbjct: 243 TDMQVAEISFACGYESPPFFFRQFRKFGGITPAAYRNQFRTTEAE 287 >UniRef50_A5N4U3 Predicted transcriptional regulator n=2 Tax=Clostridium kluyveri RepID=A5N4U3_CLOK5 Length = 298 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 99/266 (37%), Gaps = 10/266 (3%) Query: 56 ETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPL 115 + + II + SG +N + N+ + + F +AT++ Sbjct: 35 SSYSIPWHWHEDFEIIWVISGSIKVSVNSTEHILNKNQGIFINAG--FLHSIHATNDGEY 92 Query: 116 AGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEI-------LCAAERLLDV 168 + + + I + +P + + L I + + Sbjct: 93 VLRSIVFHPRLIGS-IDSIYWQNYIEPIIQNKNLPYILLDPFINWQDKILAYSISVWNRL 151 Query: 169 MERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLS 228 I + + +++ VLT + + I +L+ I+ ++E ++ Sbjct: 152 YNTENGFEIYVRNELSQLILIVLTNHSICEAKPSIRNLRNADRIKTMLQYIQMHFSETIT 211 Query: 229 VEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYE 288 + LA A +S S F ++P QYLK YR+ KA M+I M + A + G++ Sbjct: 212 ISTLARVALISESEVLRCFHRTIHSTPNQYLKQYRIQKACQMLIDTDMTSIDIAFQCGFQ 271 Query: 289 SASQFSREFKRYFGVTPGEDAARMRA 314 S+S F++ F+ G TP E R + Sbjct: 272 SSSYFTKTFREQIGCTPLEYRKRDQQ 297 >UniRef50_C7PFA7 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFA7_CHIPD Length = 309 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 108/271 (39%), Gaps = 8/271 (2%) Query: 50 VRLLYGETPFARTPVMY-EPGIIILFSGHKIGYINER-VFRYDANEYLLLTVPLPFECET 107 + + P+ + + I + G K+ +++++ F Y E +++ + Sbjct: 35 LNIFESYEQAYHVPLTFNDLVITSMIRGKKVMHLSDKPSFDYLPGETVIVPPQETMIIDF 94 Query: 108 -YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI----NSATLSEEILCAA 162 AT+E P + L +D + ++E + + + + + EI Sbjct: 95 PEATAENPTQCIALAIDDVYIRETVDYLNNYYNSGEGRQNWQLSFHQYHFENNHEITELI 154 Query: 163 ERLLDVMERPLDAR-ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIEN 221 +L+ + ++ I ++E+L +L G + + + ++ VL I Sbjct: 155 NKLIRICTSQDKSKNIYADLQLKELLIRLLQSQQLGQAVESSVADNNGNRLNFVLHYIRE 214 Query: 222 KYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAA 281 TE ++V+ L+ +A +S + F F+ +P++Y+ R+ A+ ++ Sbjct: 215 HLTEKIAVDALSRKAYLSRNLFFKWFREQFGITPVEYVNKERIKLAKELLAKPQSSIYDV 274 Query: 282 AMRVGYESASQFSREFKRYFGVTPGEDAARM 312 + G+ + F R F++ G TP ++ Sbjct: 275 SKLCGFTDVNYFIRVFRKIEGTTPKVYQCQL 305 >UniRef50_B9JPZ9 Transcriptional regulator (AraC/XylS family) n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPZ9_AGRRK Length = 312 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 108/309 (34%), Gaps = 17/309 (5%) Query: 16 KLRDMKREEICRLLADKVNK-LKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILF 74 ++ ++ LA K + L + ++ + D + F E I ++ Sbjct: 7 SVQPRAPRKVAPQLAPKFEQILTTEHDTFLWRIDDYPWVRSLWNFHP-----EFEIHLIR 61 Query: 75 SGHKIGYINERVFRYDANEYLLLTVPLPFEC--ETYATSEVPLAGLRLNVDILQLQELLM 132 Y+ + + + + ++ LP + ++P L + D +L++ Sbjct: 62 KSSGTAYVGDYIGDFGPGDLTVIGSNLPHDWVSHIGKDDKIPGRDLVVQFDPDKLRQASQ 121 Query: 133 DIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLT 192 + E + + + A+R ++E L + I + +L Sbjct: 122 HLPEIKRLNSLLTTAQRGLRFSGA----TAQRAAHLLETIGKFDGLERLIRFLRVLELLA 177 Query: 193 GPCGGALLALVSRQTHFSLI-----SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNF 247 +L+ + I R + I + +TE + + +AA ANMS + F F Sbjct: 178 DSKECDVLSSPEFAPNVDAITLNTMQRAILHINSHFTEKIQLPDVAAVANMSTNRFSRFF 237 Query: 248 KSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 T S Y+ + R+ +A ++ VGY + S F+R F R+ G +P Sbjct: 238 IKNTGRSFTDYVVSLRIGRACRLLSESDKPVIDICYEVGYTNLSNFNRSFLRHVGKSPSA 297 Query: 308 DAARMRAMQ 316 + Sbjct: 298 YRRAAHGKR 306 >UniRef50_A4CQ66 Activator protein MtlR n=10 Tax=Bacteroidetes RepID=A4CQ66_9FLAO Length = 292 Score = 188 bits (479), Expect = 1e-46, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 108/266 (40%), Gaps = 12/266 (4%) Query: 57 TPFARTPVMYEPGI--IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVP 114 P Y P I + + G+ I V Y + +L+ LP T A + Sbjct: 30 KPNKNLVWHYHPEIELVYVNGGNGKRQIGSHVSYYTQGDLILIGSNLPHCGFTDACTGNT 89 Query: 115 LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLD 174 + + L I E + + + A E++ + + Sbjct: 90 SESVV-QMKTDFLGSDFFSIPEMRNIRQLFEKAKGGIAFTGSAKKKIGEKIEILEYKSDF 148 Query: 175 ARILGKQ-IIREIL----YYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 R+L I+ E+ Y +L L++ ++ I+ + ++ Y E +S+ Sbjct: 149 QRLLAILNILNELGSTSEYQILNAEH----LSVETQSKENERINSIFNFVKENYREPISL 204 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 E++A +M+V +F FK VT+ + +Q++ YR+ A ++ + M + G+ + Sbjct: 205 EEMADLTHMTVPSFCRYFKKVTNKTFVQFVNEYRMVHASNLLSENEMSITEICFESGFNN 264 Query: 290 ASQFSREFKRYFGVTPGEDAARMRAM 315 S F++ FK + G++P E +++++ Sbjct: 265 FSHFNKSFKAFTGMSPSEYRNQLKSV 290 >UniRef50_C6CTF5 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTF5_PAESJ Length = 294 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 103/264 (39%), Gaps = 5/264 (1%) Query: 55 GETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVP 114 + P E ++++ G + ++ + + A E + + Sbjct: 28 SDAPLLDLHWHDELELLLVTEGTAVFRVDLQDYELQAGEAIFVNSGELHSGYVVGGKPCS 87 Query: 115 LAGLRLN---VDILQLQELLMD-IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 + + + L I + + A E+L +++ +V Sbjct: 88 FDAVVFHSSLFSSGSIDYLFDRYISPVLEKRYEVPAHLRREPGPGMELLAMLDQIFEVHR 147 Query: 171 RPLDARIL-GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 A L K ++ IL +++ + + V++ IE Y E + + Sbjct: 148 NEQAASELTIKGLLFSILAKLVSLGKPSVRVKPEQEGYRIERLKTVIEYIEQNYAEPIPL 207 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 ++LA A MS S F FK +T+ SP++Y+ +YR+ +A + K A+ VG+ S Sbjct: 208 QKLAELARMSESYFCRFFKRITTKSPIEYMNSYRVQQAASRLRQTDAKIMEVALDVGFNS 267 Query: 290 ASQFSREFKRYFGVTPGEDAARMR 313 S F+ F++ FG TP E +R++ Sbjct: 268 LSYFNTVFRQRFGCTPREYRSRLQ 291 >UniRef50_B9JQ27 Helix-turn-helix, AraC type n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ27_AGRRK Length = 299 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 112/294 (38%), Gaps = 12/294 (4%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINE-RVF 87 + + KL + + P + + GHKI +N + F Sbjct: 1 MVNVTEKLIEYRMVRHSAASEASSYLTNHIAEVSLCFPNPIVCQMMRGHKIMRVNGSKPF 60 Query: 88 RYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDEHF-----Q 141 + E +L+ +P E A+ E P + + +D Q+ E++ + + + + Sbjct: 61 DFLPGEAMLVAPGMPLEILFPEASPEDPTECICIEIDRSQVDEIVERVNQGQKRLGLDGR 120 Query: 142 PSMAASGINSATLSEEILCAAERLLDVMERPLD--ARILGKQIIREILYYVLTGPCGGAL 199 S+ + IL RL+ + +L E++ +L L Sbjct: 121 FSLDWTRFAVFRKDLAILGQMNRLMTLYRDEKSPFRDVLVDLGHEELVLRILQA-QSREL 179 Query: 200 LALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYL 259 L + + + + + + E ++E LA A MS + F FK+ +P ++ Sbjct: 180 LVEQRTFSPTTGLDVAAEMLRDNPRERYAIEDLAQIACMSEATFFRRFKARFGVTPAKFA 239 Query: 260 KNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + R+H+AR ++ + A +G+ S FSR F+R G TPG R+R Sbjct: 240 NDCRIHRARALLATT--PVTEVAFDLGFASVEHFSRLFRRVTGETPGGIRKRLR 291 >UniRef50_Q398W4 Transcriptional regulator, AraC family n=30 Tax=Burkholderia RepID=Q398W4_BURS3 Length = 322 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 85/262 (32%), Gaps = 9/262 (3%) Query: 58 PFARTPVMYEPGI--IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPL 115 P+ + P ++ + ++ + + + +LL LP + + Sbjct: 25 PYRTIRWHFHPEFELHLIVATRGKYFVGDHIGSFGPGHLVLLGPNLPHNWVSDMAEGETV 84 Query: 116 AG--LRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL 173 L + D ++ + E Q + + A L D + Sbjct: 85 ERRNLVIQFDPAFVRRCMDAFPECRDAQALLDDARRGVG-FDAATSAAIAPLFDELLAAR 143 Query: 174 DARILGKQIIREILYYVLTGPCGGALLALV--SRQTHFSLISRVLKRIENKYTENLSVEQ 231 R + + IL + L + + +S L I L Sbjct: 144 GMRRIA--LFMTILERLCGAAERTLLASPAYDQADVTPTRLSHALSYIGKNLASELRESD 201 Query: 232 LAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESAS 291 LA SVSAF F T +QY+ R+ A M++ D + + G+ + S Sbjct: 202 LAQLTGQSVSAFSRAFHRQTGMPFVQYVNRLRIESACQMLLADDANITDICFQAGFNNVS 261 Query: 292 QFSREFKRYFGVTPGEDAARMR 313 F+R+F+ G+ P E A R Sbjct: 262 NFNRQFRAVKGMAPSEFRALQR 283 >UniRef50_UPI000197BA84 hypothetical protein BACCOPRO_03194 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197BA84 Length = 292 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 114/302 (37%), Gaps = 19/302 (6%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPG--IIILFSGH 77 MK + + K++ ++ + ++ P+ P+ P +I++ G Sbjct: 1 MKTNSL-HQMEATFEKVEKRKGT------SFSVVSYTNPYFAAPLHIHPEYELILIEEGK 53 Query: 78 KIGYINERVFRYDANEYLLLTVPLPFEC----ETYATSEVPLAGLRLNVDILQLQELLMD 133 + ++ + + +++L+ LP E Y S + + D L D Sbjct: 54 GLSFVGDSIQELSPGDFMLIGKNLPHLWLSADEYYQNSGLVSRSVYTQFDDRIFPASLHD 113 Query: 134 IGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG 193 I E E+ + S I A + L + + +LY + + Sbjct: 114 IPELENIYSLLKKSQKGVFFTGGSI-EALKELFRSLVTKEGFEKIEGLYT--LLYRLSSE 170 Query: 194 PCGGALLA---LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSV 250 L + S T +I++V I Y N+++E +A M+ SA +K Sbjct: 171 CNHATLTTENYINSDSTEDPIINKVHLFINKNYQNNIALEDIACNVGMNPSALCRYYKKH 230 Query: 251 TSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 T +YL R+ A ++I+ + S A GY S S F+ +FK+ G TP E A Sbjct: 231 TGKRMFEYLTELRISYATKLLINKNINISQVAYDCGYNSLSHFNHQFKQVTGYTPSEYAQ 290 Query: 311 RM 312 ++ Sbjct: 291 KL 292 >UniRef50_A3DHI5 Transcriptional regulator, AraC family n=5 Tax=Clostridium RepID=A3DHI5_CLOTH Length = 302 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 96/251 (38%), Gaps = 7/251 (2%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL----NVDI 124 ++ + G + I N+ +++ P + + S L D Sbjct: 49 EMVYIKRGKAVFEIAGYPAEIGPNDIIIIKPNQPHKFIVKSESGCEFIVLSFKFVNRFDG 108 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL-DARILGKQII 183 L + + + + + + ++ I+ R+L E P + L ++ Sbjct: 109 QYSDVSLENFLDFVSGKETGPFITLKVSQKND-IIVLLNRILKERENPDIGSEFLNYLLV 167 Query: 184 REILYYVLTGPCGGALLALVSRQTH-FSLISRVLKRIENKYTENLSVEQLAAEANMSVSA 242 E+ + ++ ++ LI + I N Y ++S++ +A +S S Sbjct: 168 MELFVLISRALKMEWENSIKNKSPKIKELIQASVNYINNNYERDISLKDIARYVFLSTSY 227 Query: 243 FHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFG 302 F FK SP+ YL R+ +A+ ++ + S A+ VG+ + +F+ FK+Y Sbjct: 228 FTRAFKEEMGISPINYLLKIRVERAKELLKDTDNRISDIALSVGFSNQQRFNDIFKKYVK 287 Query: 303 VTPGEDAARMR 313 +TP + ++ Sbjct: 288 LTPLQYRKNVQ 298 >UniRef50_UPI0001C356F7 AraC family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C356F7 Length = 268 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 102/260 (39%), Gaps = 9/260 (3%) Query: 53 LYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSE 112 + YE L+SGH +IN ++ + + + L +++ Sbjct: 12 YEFHMAESHWHTHYE--FYYLYSGHCKIFINHTLYYVEPGDIIFLKPGEIHRTTYHSSPV 69 Query: 113 VPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP 172 + ++ D L + + ++ +E+ + S + + + R ++ E Sbjct: 70 N--ERVTISFDGEYL-DSMKELCGEENVEYIFRNSKVTVPNGNRSRVEELIRRIEYEETG 126 Query: 173 LD--ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 D + ++ K E+L + C A + I K I + Y +++E Sbjct: 127 QDGFSPLMKKGCFYELLVSL--SRCQEAETDHGRLEIGEETIEAAAKYIYDHYQNPITLE 184 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 ++A ++MS + F FK+VT +YL N R+ +A +++H + A R G+ Sbjct: 185 EVAELSHMSPAYFSRKFKAVTGFGYKEYLTNIRIREASRLLLHSACSVTEIADRCGFGDG 244 Query: 291 SQFSREFKRYFGVTPGEDAA 310 + F F++ GV+P Sbjct: 245 NYFGDAFRKAKGVSPRAFRK 264 >UniRef50_C6IWJ9 Transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWJ9_9BACL Length = 284 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 91/249 (36%), Gaps = 18/249 (7%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 I + SG I + F + L + A P + + Q+ E Sbjct: 45 IHFIHSGRGIVKVEGETFELTGGQAFLAYPERVIFYQ--ADEVDPWTYSWIGFNGEQVAE 102 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 +L P+ +++ +L +++ ++ ++ +LY Sbjct: 103 ILSR----TRLTPASPVLPMDT--------HLMPQLYELLNEAEESNTTRDLRLQTLLYE 150 Query: 190 VLTGPCGGALLA----LVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHH 245 +T + Q + I R L + + Y+E +SV QLAA + Sbjct: 151 FMTLLVELVPASGDADSTRTQAKDAYIHRCLDFLHSHYSEEMSVGQLAAIVGLDRKYLSS 210 Query: 246 NFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTP 305 FK T P QYL YR+ KA ++ + + A VGY+ A FS+ FK+ G +P Sbjct: 211 LFKRATGMPPQQYLLKYRMEKACALLRNGHYSIAEVARSVGYQDALLFSKMFKKTVGTSP 270 Query: 306 GEDAARMRA 314 + + + Sbjct: 271 SDYREQWQK 279 >UniRef50_A4XH00 Transcriptional regulator, AraC family n=2 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XH00_CALS8 Length = 275 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 14/248 (5%) Query: 70 IIILFSGHKIGYINE-RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 + G K INE F+YD+N +++L E L + +D + Sbjct: 39 FCSILQGDKYVEINESEKFKYDSNSFVILPPY----SRVKLEIEEKTKALVIEIDSYLIN 94 Query: 129 ELLMDIG-EDEHFQPSMAASGINSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREI 186 +L + E E ++ + S ++ ++++D R ++ L +E Sbjct: 95 HVLSKLKIEFEPYELGNVNNIFFVGKYSPDLTQTYKKIVDTFFSRKVNREFLLDLYTQEF 154 Query: 187 LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHN 246 +Y + ++ S I +L I N Y L + +A E NM F Sbjct: 155 VYDIFKYRGAEKII-----NDKNSEIYHILDYINNNYLRRLKISDIAKEFNMKEYEFTRY 209 Query: 247 FKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPG 306 FK T SP +Y+K+ +L+KA+ ++ + + +GYE+ S F +EFK FGVTP Sbjct: 210 FKKFTGKSPKEYIKDLKLNKAKELLKFEN--VTDVCYDIGYENISHFIKEFKNKFGVTPN 267 Query: 307 EDAARMRA 314 + + Sbjct: 268 LYKKALNS 275 >UniRef50_UPI0001788255 transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788255 Length = 292 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 93/262 (35%), Gaps = 8/262 (3%) Query: 57 TPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLA 116 + E I + G + I+ A E + + Sbjct: 33 AHVVDSHWHKEAEIFYVMEGEVLFQIDSEYIPVRAGEAIFIDGGDLHTGHAQGNEGCSFC 92 Query: 117 GLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATL----SEEILCAAERLLDVM-ER 171 + D+ L D+ ++ P + E +L + ++ + + Sbjct: 93 AMV--FDVGMLASSSYDLVQEGMIVPFQERRAAFPRRMTSGTDERLLEHIKEMMLLSKHK 150 Query: 172 PLDARILGKQIIREILYYVLT-GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVE 230 P K + +L+ + G + + T + +V+ I++ Y + + Sbjct: 151 PAGYEAAIKGHLFLMLFQAASSGRLANRSRSEAADMTRTERLKKVILYIQSHYHRPIRLS 210 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 +LA MS F FKS+T +P+ Y+ +YR+ +A ++ K S A+ VG+ Sbjct: 211 ELADLIPMSEGQFCRFFKSMTGQTPVDYMNSYRVRQAAELLRSPDNKISDIALDVGFGHI 270 Query: 291 SQFSREFKRYFGVTPGEDAARM 312 S F R F++ TP E ++ Sbjct: 271 SYFVRVFRKIMNCTPSEYRKKL 292 >UniRef50_D2QRP4 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRP4_9SPHI Length = 290 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 14/278 (5%) Query: 48 PDVRLLYGETPFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC 105 + + + P+ P Y P + + H ++ + V + A + +LL LP Sbjct: 14 SSLLVRRFQIPYFDAPWHYHPEYELTYIVKSHGRRFVGDHVDSFQAGDLVLLGPDLPHFW 73 Query: 106 E-----TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 A S + + + L + E E + + S S+ + Sbjct: 74 RNDDDYYQAGSVQKAVSIVVQFPATFPERGLATVPEAESVRKLLERSRYGL-RFSQAMSQ 132 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL----ALVSRQTHFSLISRVL 216 + LL+ + + L + IL + T L L + RVL Sbjct: 133 SVSELLEQLPQQTGLPQLLGLLT--ILNELATDQEAYLLASDGYQLAPGAAETERMKRVL 190 Query: 217 KRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM 276 + + + E + +E +A+ A M+ +AF FK+ T + ++YL R+ AR ++ + Sbjct: 191 EFVLLHFREEIRIESIASIAGMAPAAFCRYFKNRTRKTFVEYLNELRIGHARKLLTTTDL 250 Query: 277 KASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 S ++ GY ++S F R+FK Y +TP + A + Sbjct: 251 SISQVSLDCGYNNSSHFHRQFKLYTSITPFQYQALAKG 288 >UniRef50_B1KR44 Transcriptional regulator, AraC family n=2 Tax=Alteromonadales RepID=B1KR44_SHEWM Length = 289 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 52/290 (17%), Positives = 109/290 (37%), Gaps = 17/290 (5%) Query: 40 ENSLSGLLPDVRLLYGETPFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLL 97 E + R + + P Y P I + + + YI + + Y + + + Sbjct: 6 EKVIPSSNSSWRFVKYQLPNIDFNWHYHPEYEICLTLNSQGLRYIGDHIEEYSEPDLVFV 65 Query: 98 TVPLPFECETYATSEVPLAGLRL-NVDILQLQELLMDIGEDEHFQP--SMAASGINSATL 154 +P + + + + + L L + + E + + ++ GI + Sbjct: 66 GPHMPHTWHSSINEDESTQIVYVAQIPKLWLDGQVAEHPEMQGLEEMLERSSRGIFYSP- 124 Query: 155 SEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV------SRQTH 208 + E+ L + ++ A + I+ L V+ LL+ + Sbjct: 125 -----ESTEKALSLFQQMESADPFSRYILLMNLLNVMLKDAQSKLLSSRFFTYGDKTDSG 179 Query: 209 FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKAR 268 + RV++ I + L ++LAA A+MS + FH FK T + +++ R+ KA Sbjct: 180 IDKLDRVIEYIYGNFDRGLYADELAAIAHMSTNHFHRFFKKRTERTLTEFINQLRIGKAC 239 Query: 269 MMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 ++I+ S + + G+ + S F+R+F G TP +R Sbjct: 240 KLLINSNHPISVISDQCGFNNISNFNRQFLSIKGSTPSRFRKSLRLKHAQ 289 >UniRef50_C4FUL3 Putative uncharacterized protein n=2 Tax=Catonella morbi ATCC 51271 RepID=C4FUL3_9FIRM Length = 277 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 90/246 (36%), Gaps = 13/246 (5%) Query: 70 IIILFSGHKIGYINE--RVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQL 127 + SG NE + + L+ C A + P + + L+ Sbjct: 43 FHYILSGRGSFLENERHEAIQLGPGQGFLMPPNT--VCSYTADQDDPWTYCWIEFNGLKA 100 Query: 128 QELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREIL 187 + G + + + +++ + + R L Q + ++ Sbjct: 101 ANFMRQAGLNANNLIFTPHKPMIISSIKDTL-ETIIR-----NHSQHESFLIAQ-LYLLV 153 Query: 188 YYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNF 247 +++ + H I + I++ Y +N SV+QLA +++ + F F Sbjct: 154 DHLIRFSKHSP--QQRPNEIHSFYIREAIHYIQDHYMDNPSVDQLADICHLNRNYFTRLF 211 Query: 248 KSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 K +P Q++ YR++++ ++ A ++GY + FS FKR G+TP E Sbjct: 212 KQELHMTPSQFILTYRINQSCELLASTNRSIRDIADQIGYSNQFNFSSAFKRVKGMTPME 271 Query: 308 DAARMR 313 R R Sbjct: 272 WRRRYR 277 >UniRef50_C0YPK7 AraC-type DNA-binding domain-containing protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YPK7_9FLAO Length = 307 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 112/301 (37%), Gaps = 13/301 (4%) Query: 20 MKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEP-GIIILFSGHK 78 + E+ + +++ L + + + + + +E + G K Sbjct: 9 LNTPELRKE--NQLLSLVENQTKFNLNNCEFNIYETHKAAFDVKLHFENIAFTAMLRGKK 66 Query: 79 IGYINERV--FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGE 136 ++ + F Y E +L+ + E P + L+++ +++ L + Sbjct: 67 HMKLDNKTSYFDYYPGESILVAPGETMVIDFPEADETPTQCISLSLNPDFIEDSLNYLNY 126 Query: 137 DEHFQPSMAASGINSATL----SEEILCAAERLLD-VMERPLDARILGKQIIREILYYVL 191 + I ++ + A ++ M+ I+ ++E+L ++ Sbjct: 127 HLPKVDEASQWNIQLDEYFLFNNKALASATNNIMRIAMDDNSQKDIMADFALKELLIRLM 186 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 + + + S I V+ I+ + LS++ +A A +S S F FK Sbjct: 187 QTQARSMVEKNIVKNK--SRIGFVVDYIKTNLHQKLSIDSIAKLAYVSKSNFFKMFKDEL 244 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 TSP ++ R+++A+ ++ A + G+ + F+R FK+ GVTP R Sbjct: 245 GTSPNDFILQERINRAKELLA-SQTSIKETAFQTGFSDTNYFTRVFKQLEGVTPKSYQDR 303 Query: 312 M 312 M Sbjct: 304 M 304 >UniRef50_Q98D14 Transcriptional regulator (AraC/XylS family) n=2 Tax=Mesorhizobium RepID=Q98D14_RHILO Length = 305 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 105/294 (35%), Gaps = 14/294 (4%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGET-PFARTPVMYEPG--IIILFSGHKIGYINERVF 87 + + + D L + P+ R + P I +L + + + + Sbjct: 10 AAIPRTAPAFEHIVTEASDSFLWRLDDYPWERNVWNFHPEYEIHLLRKSSGVVLVGDHIG 69 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAG--LRLNVDILQLQELLMDIGEDEHFQPSMA 145 + ++ LP + T + G + L D +L+ + E +P + Sbjct: 70 EFGPGYLTIVGGGLPHDWVTAVRPGELIEGRDIVLQFDAQRLRGSAGLLPELRELEPFLE 129 Query: 146 AS---GINSATLSEEILCAAERL--LDVMERPLDARILGKQIIREILYYVLTGPCGGALL 200 S + + E ER+ + + R L + R Y +L+ P +L Sbjct: 130 RSLRGMVFHGRTALEGAGLMERMGTVHGLARLCLFLELVDLLARTDEYELLSSPDFSPVL 189 Query: 201 ALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 260 S +I R L + + E+L + +A A MS S F F+ T S +L Sbjct: 190 DAASLD----IIQRTLTYLFQHFAEDLKLPDVAERAGMSESTFSRFFQKNTGNSFSDHLA 245 Query: 261 NYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 RL +A ++ + + +VGY + S F+R F R +TP R Sbjct: 246 KLRLWQACKLLADTDVAITDICFQVGYMNISNFNRAFLRKHKMTPSSYRKLSRQ 299 >UniRef50_C6BZC3 Transcriptional regulator, AraC family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZC3_DESAD Length = 293 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 110/279 (39%), Gaps = 7/279 (2%) Query: 43 LSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLP 102 + V+ ++ + + ++ + G K + + E Sbjct: 18 TVDGITFVQFQSRKSKIRHEVCVSQHSLVFVLEGTKYIHSADGDMVIRKGEAFFCRKGCH 77 Query: 103 FECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAA 162 E + D L + + +++ S S ++E++ Sbjct: 78 LMSEMIPEDGGTFDTVLFFFDDAILGNFVDQLSAEKNQIASTDRSAFRI-KVTEQVSIYL 136 Query: 163 ERLLDVMERPLDA-RILGKQIIREILYYVLTGPCGGALLA--LVSRQTHFSLISRVLKRI 219 +L + + PL + + E+L+Y+ T ++ + R + +S V + Sbjct: 137 SSMLSLFDSPLGKNDDFLRLKVNELLHYIYTASGNDEFVSFLVACRNSSRGDLSAV---M 193 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 E + +N+S+E +A + S+S+F FK +T+P ++++ R+ A ++ + + Sbjct: 194 ERYFNKNISLETVAELSGRSLSSFKREFKKTFNTTPARWIRERRMSWAEQLLRNSAKSIT 253 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 + GYES S FS F++ +GVTP E A + + + + Sbjct: 254 EISYESGYESLSHFSTLFRKNYGVTPREYRAELNSAKSD 292 >UniRef50_Q3ID67 Putative transcriptional regulator (AraC/XylS family) n=1 Tax=Pseudoalteromonas haloplanktis TAC125 RepID=Q3ID67_PSEHT Length = 300 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 114/303 (37%), Gaps = 13/303 (4%) Query: 17 LRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMY-EPGIIILFS 75 + + + + L + + ++ + + + E + S Sbjct: 1 MHTPQLNKQRQQLKVLIENKVT----FAADNSELSIYDTYQNAQKVALHSKELLFCAMLS 56 Query: 76 GHKIGYINERVFR--YDANEYLLLTVPLPFECETY-ATSEVPLAGLRLNVDILQLQELLM 132 G K+ ++ + + +E +L + A+ P L + + ++ ++ Sbjct: 57 GKKVMHVESCQYHRAFLPHESFVLAPEQGVLIDFEQASLSAPTTCLAIEISTDKITQVAN 116 Query: 133 DIGEDEHFQPSMA---ASGINSATLSEEILCAAERLLDVMERPLDAR-ILGKQIIREILY 188 + ++ F + + + + R++ + P + R L + E++ Sbjct: 117 ALNIEQRFASDDLFAYTPQLVHSQHNSQTQQLLARMVHLFSEPDEQRGYLIDLSLNELIT 176 Query: 189 YVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFK 248 +L LL + + ++ L+ IE E L +E+L A MS S F+ FK Sbjct: 177 RLLQQQSRDLLLKHGNNPQLKTPVNNALQYIEEHLNEALDIERLCKIACMSRSKFYQQFK 236 Query: 249 SVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 TSP + + RL KA ++ G K S A +G+ S FSR FK+ +GV P Sbjct: 237 LAFGTSPALWQQQLRLKKAYSKLLQGG-KVSQACYELGFNCPSHFSRLFKQAYGVPPASI 295 Query: 309 AAR 311 A + Sbjct: 296 AKK 298 >UniRef50_C5VY46 AraC-family regulatory protein n=8 Tax=Streptococcus RepID=C5VY46_STRSE Length = 278 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 97/264 (36%), Gaps = 19/264 (7%) Query: 53 LYGETPFARTPVMYEPGIIILFSGHKIGY--INERVFRYDANEYLLLTVPLPFECETYAT 110 L+ P + + + SG Y ++R + A + L++ C A Sbjct: 31 LHSFGPTMKQHYL----FHYIISGSGTFYDTSDQREYHLTAGQGFLISPD--AICSYEAD 84 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 + P + L D L+ + L G + QP + + S + +++L + Sbjct: 85 EKDPWTYIWLEFDGLKTEHFLRQAGLSKE-QPIFSQREM---PTSSPVYHEMKQILALHH 140 Query: 171 RPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFS-LISRVLKRIENKYTENLSV 229 + ++ + ++ + I + +E Y + +SV Sbjct: 141 QKSA------LVLGHLYLFISCLIDCSLTKTSSKHDENKEFYIREAINFVERNYEKAISV 194 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 + LA N++ F FK + SP Q++ YRL +A ++ + A +GY + Sbjct: 195 DDLAQVCNLNRHYFSRLFKEQMNISPQQFIIQYRLSEACELLKNTTKTLQEIAEEIGYSN 254 Query: 290 ASQFSREFKRYFGVTPGEDAARMR 313 FS FKR++ ++P + Sbjct: 255 QFNFSTAFKRHYQISPNRWRKIHK 278 >UniRef50_B6FM02 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B6FM02_9CLOT Length = 294 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 96/258 (37%), Gaps = 8/258 (3%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 + SG + F AN+ +++ E ++ L + Sbjct: 32 PRHWHEHLQVYYFISGTAKLECGKNNFEVQANDLVIVNPN---ELHYLESTSDNLVFYTI 88 Query: 121 NVDILQLQELLMDIGEDEHFQPSMAAS--GINSATLSEEILCAAER-LLDVMERPLDARI 177 + L +D+ + ++ P N + E+ ++ L++ + + + Sbjct: 89 RFEPSFLFSNHVDLLQTKYLTPITLNRIEFNNLIQNNTELTELVKKVLMEYFNKKIGYEL 148 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI--SRVLKRIENKYTENLSVEQLAAE 235 K I ++ +L L +LI + IE KY E +++ +LA Sbjct: 149 AIKGYIYYLVVTLLRNHVQHILTQSELDDKEATLIRFQPAFELIEKKYNEKITLSKLANT 208 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 +SV F +FK +T + Y+ N RL K+ + + A+ G+E+ + FSR Sbjct: 209 VGLSVHHFCRSFKQLTGKTTTDYINNIRLDKSIYYLKQTDYNITEIALMCGFENGNYFSR 268 Query: 296 EFKRYFGVTPGEDAARMR 313 FK+Y +P + + Sbjct: 269 IFKKYHSTSPSQYRNLYK 286 >UniRef50_C4ZBG0 Transcriptional regulator, AraC family n=5 Tax=Clostridiales RepID=C4ZBG0_EUBR3 Length = 279 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 106/271 (39%), Gaps = 18/271 (6%) Query: 49 DVRLLYGETPFARTPVM-YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET 107 +V ++ + P + I + SG +N V + L+ + Sbjct: 23 NVGFQSCDSLYQWGPGIRDHYLIHYIISGKGRYTVNGSVHTLTPGDAFLVYPNTEVIYQ- 81 Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 A ++ P + +L + A I+S + EI + D Sbjct: 82 -ADAQDPWEYTWVGFTGSDAATILRATD------FTKAHPYIHSVSNGNEIKRQLMHIYD 134 Query: 168 VMERPLDARILGKQIIREILYYVLT--GPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 + + E+ + T A + + + S + + ++ I Y+ Sbjct: 135 ARGTEFENAL-------EMTGRLYTTLALFVSAATSKPPQNSANSYVQKGIEYISANYSY 187 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 ++VE +A+ +S S +F+S+ SP +YL ++R+ +A ++ H + +A A + Sbjct: 188 PITVEDIASYIGLSRSHLFRSFQSILGVSPKEYLTDFRIKQACYLLKHSSLSITAIAGSI 247 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 G++++ FS+ F + G++P E ++ + Q Sbjct: 248 GFDNSLYFSKTFHKIKGLSPKEYRSKYKKAQ 278 >UniRef50_D1PIK0 Putative pectin acetylesterase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIK0_9FIRM Length = 615 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 104/254 (40%), Gaps = 16/254 (6%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 R+ I L G + I + + +E+++ ++ ++VP L L Sbjct: 29 RSHYHEFFEIYYLEQGRRQHIIEDSQYILQPDEFIIFPP--FVMHHSFEENDVPFRRLLL 86 Query: 121 NVDILQLQ--ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARIL 178 + ++ ++L + E A L ++IL ER L +R L Sbjct: 87 YFNPEVIRSPQILRTLSERARVYKLPRAQSAPIYNLMKDILQEQER------DDLYSREL 140 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 ++ + ++ +R + ++ ++ + +TE++++EQLA + Sbjct: 141 ITLMVNALALQLVRNS------DEAARPEQRNRVTDIINYLHEHFTEDITLEQLANHFYV 194 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 S FK TS++ +QY+ N R+ A+ ++ + + RVG+ + + F+R +K Sbjct: 195 SQYHLCREFKRYTSSTIVQYIHNLRVLHAQRLLQESDYSITEISKRVGFSNVTHFNRVYK 254 Query: 299 RYFGVTPGEDAARM 312 G++P ++ Sbjct: 255 SVTGMSPSQNKQAY 268 >UniRef50_A7B0D2 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B0D2_RUMGN Length = 270 Score = 184 bits (467), Expect = 4e-45, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 14/247 (5%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 + L G ++ I ++ AN+++L + +Y ++P + L + Sbjct: 37 ELYYLLEGERMHMIEGEIYHLTANDFVLFPPHI--MHHSYGEKDMPFKRIVLYFSPDLIA 94 Query: 129 -ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREIL 187 + + + ++ +N + +IL L ++ P I ++ Sbjct: 95 NDTICQLLSEKELL------FVNEGYIPNQILSLLLSLTHEIDVPGKYH--DAYICNQLN 146 Query: 188 YYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNF 247 +L L + + ++ + I N Y E++SV QLA +S H F Sbjct: 147 GLLLN---MLRLDFEAVKSIPKTRSAKAVDYIHNHYMEDISVNQLAEILYVSPYHLCHEF 203 Query: 248 KSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 K+ T + +QYL R+ A+ +++ + + VG+ + + F+R FK+ GV P E Sbjct: 204 KNATGKTIIQYLNTTRILHAQRLMLETDYNITQISREVGFSNLTHFNRTFKKITGVAPRE 263 Query: 308 DAARMRA 314 + Sbjct: 264 KKKLYQK 270 >UniRef50_UPI0001788C0B transcriptional regulator, AraC family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788C0B Length = 288 Score = 183 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 98/268 (36%), Gaps = 10/268 (3%) Query: 51 RLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 R+ Y YE + L SG +I +I +R +R A + + + +T + Sbjct: 23 RIGYFSMSADHLHDHYE--LYYLLSGERIYFIKDRSYRVRAGDLVFV--DRNAVHKTLDS 78 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 L L ++ +L + E + + L A ER++ M Sbjct: 79 GRPDHDRLVLYINPELFADLAVPPELAEGLKEPF-GWDVPILRLPSPASEAVERMVGDMV 137 Query: 171 RPL-----DARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 + + L + E+L + G + + + V++ + + Y + Sbjct: 138 NEMIHPQAGSSWLLRHRTVELLLFAYRSRHLGMVRSADTEPVLHPKTQAVVRYLNDNYRQ 197 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 L++ ++A +S FK T + YL R+ +A+ ++ + A R Sbjct: 198 ALTLPEVAEAFRISPHYLSRLFKQTTGFTFSDYLNLLRVKEAQRLLRESDDSITDIAWRS 257 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMR 313 G+ + S F + FKR ++P + R Sbjct: 258 GFSNFSHFGKMFKRTVQLSPRAYRQQYR 285 >UniRef50_B8FM47 Transcriptional regulator, AraC family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FM47_DESAA Length = 277 Score = 183 bits (465), Expect = 6e-45, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 12/272 (4%) Query: 46 LLPDVRLLYGETPF-ARTPVMYE-PGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPF 103 +P ++ ++G + +++ I I+ G ++ + L+ P Sbjct: 16 DIPHIQAVHGLHVTNEFSRHVHDGFSIGIVLEGKRVIDQKGASVVIGPKDVFLINPGEPH 75 Query: 104 ECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAE 163 C+ + + + V+ L+ I E P + A EE+ Sbjct: 76 ACK---SEDGKHTYFTICVEPEALKSFASQISEKAQETPYFS----CLAAKDEELNSLIR 128 Query: 164 RLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKY 223 + ++++ +I + +L G + H ++R + I+ Y Sbjct: 129 EFMTLVQKSGSTMEKEASLISILSTAILR--YGDNPPEIRRISPHVQAVNRAREYIKTHY 186 Query: 224 TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAM 283 ENL++++LA A +S F F SP +L YR+ KAR M+ G + AA+ Sbjct: 187 AENLTLKELAGVACLSPFYFQRLFLENVGISPHDFLIQYRIKKAREML-DQGSSLADAAL 245 Query: 284 RVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 VG+ S F+R FKR G++PG ++ M Sbjct: 246 DVGFTDQSHFTRAFKRVTGISPGRYIRNLQDM 277 >UniRef50_A6M1S5 Transcriptional regulator, AraC family n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M1S5_CLOB8 Length = 286 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 51/269 (18%), Positives = 92/269 (34%), Gaps = 18/269 (6%) Query: 54 YGETPFARTPVM-YEPGIIILFSGHKIGYI-------NERVFRYDANEYLLLTVPLPFEC 105 + + P + + SG Y + ++ A E LLT + Sbjct: 26 RCDPLHSFGPTVKNHFLFHYVLSGKGRLYSFNKGTQNDSSIYTIKAGEGFLLTPNI--IN 83 Query: 106 ETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 A + P + + + L+ Q L +IG I L Sbjct: 84 TYEADKDDPWNYVWVEFEGLKAQRYLEEIGLSSKNLIFTPKE---YNNDDNSIKD---NL 137 Query: 166 LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 + ++ P + Y +L + + + + IE Y Sbjct: 138 MFLLNNPSAPDSAILGHLYLFFYALLENSSFNNTKS--ASNLQEFYVREAINYIEKNYNN 195 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 N+SVE +A N+ S F FK+ T+P ++L YRL KA M+ + + + Sbjct: 196 NISVENIAKWCNLDRSYFGKIFKNSMKTTPQEFLIKYRLSKACEMLKDNNISIREISELT 255 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMRA 314 GY + FSR FK + ++P + + + Sbjct: 256 GYPNQFHFSRSFKEVYNMSPRQWRNQNKT 284 >UniRef50_C6CVH4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CVH4_PAESJ Length = 287 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 99/262 (37%), Gaps = 13/262 (4%) Query: 59 FARTPVMYEPGI-IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAG 117 R P +Y+ + + G + + A + L+ + ++ P Sbjct: 34 HQRGPKVYDFYLMHTVLEGKGEFTCGGKSYPLQAGDTFLIEPE--ALVSYISNADEPWLY 91 Query: 118 LRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARI 177 + + Q EL G A+ + + + + + A Sbjct: 92 RWVAFNGPQAAELAQAAG-------FSVANPVAETAAIRRVGVLYNHIFSIFRKNDPAAH 144 Query: 178 L-GKQIIREILYYVLT-GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 L ++ +L T A+ + LI +++ + +Y + +S+EQ+A Sbjct: 145 LKAAGYLQLLLAEFCTVHKLSEDNAAMTNMDDTDKLIQQMIHYLSTQYAQPVSIEQMAES 204 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH-DGMKASAAAMRVGYESASQFS 294 + + FK T SP+ +L R+ KAR MI +G+ A VG + + FS Sbjct: 205 FGYNRAYLSRVFKRYTGESPITFLLKLRIDKARQMIREREGLTIEQIAASVGLQDSLYFS 264 Query: 295 REFKRYFGVTPGEDAARMRAMQ 316 ++F+R++G++P MR M+ Sbjct: 265 KQFRRFYGLSPSAYRESMRQMK 286 >UniRef50_C5RI71 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RI71_CLOCL Length = 300 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 104/255 (40%), Gaps = 11/255 (4%) Query: 64 VMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN 121 + P + SG I N A + + + A+++ + Sbjct: 43 CHWHPEVEFTYILSGSMIYQANNTQHLVKAGDVIFVNQNCLHSG--KASNDCSCRYFAIT 100 Query: 122 VDILQLQELLMDIGEDEHFQPSMAASGINSATL------SEEILCAAERLLDVMERPLD- 174 + + I E+++ + + I +E+I+ RL ++ + Sbjct: 101 FNPTLISGYKSSIFENKYIGEIINSDRIPFVYFEGSKKENEQIVSLLMRLEELYREKAEG 160 Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 +L + + E+ +Y+ L+ + + I L I + Y ENL+++ ++ Sbjct: 161 YELLIESKLFELWFYLYRDVYCKVPDELIKQTKNIMQIKAALDYIHDNYKENLTLDDISE 220 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 N+S S+ FK + +P YL +YR+ ++ ++ +GM + AA+ VG+ S+S +S Sbjct: 221 ACNLSKSSCCRLFKKIVHGTPFNYLLSYRIQRSIPYLLSEGMNITEAALSVGFSSSSYYS 280 Query: 295 REFKRYFGVTPGEDA 309 FK+Y TP E Sbjct: 281 EIFKKYMKCTPTEYK 295 >UniRef50_C4Z7U7 LacI family transcriptional regulator n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7U7_EUBE2 Length = 304 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 52/267 (19%), Positives = 96/267 (35%), Gaps = 9/267 (3%) Query: 54 YGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV 113 YE I + G + + + + + A + +L L + + + Sbjct: 25 RFNMNVKHFHNQYE--IFYIIEGERQFFFDNKSYNAYAGDIAILDTNLVHTTCSISDEDK 82 Query: 114 PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL 173 + L +D ++ + GI + I A L + L Sbjct: 83 GYNRVILYIDYEKMCDFDKKYPGLNLVNYFHNNYGIYHLNEDQRI--AFLNLYRDLRHEL 140 Query: 174 DARILGKQIIREI-----LYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLS 228 + G Q EI LY +L+ + V S + +E YT+ L+ Sbjct: 141 TKKNSGYQSRVEIATIYWLYKLLSLKHDSTQIHAVINSPKELSASNISAYLEANYTKELA 200 Query: 229 VEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYE 288 ++ ++ E MS FK T + +Y+ R+ KA ++ + S A +G+E Sbjct: 201 LDTISDELFMSKYYMCRIFKEYTGFTITEYVNTLRIKKATQILESSNLSISDVAAELGFE 260 Query: 289 SASQFSREFKRYFGVTPGEDAARMRAM 315 SAS F R FK+ VTP + +++ Sbjct: 261 SASYFERIFKKIMTVTPLKYRKTHQSV 287 >UniRef50_C6IWY8 Helix-turn-helix domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IWY8_9BACL Length = 293 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 102/275 (37%), Gaps = 19/275 (6%) Query: 54 YGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV 113 +E I L SG + +I ++++R A + +L+ V + + Sbjct: 24 RFSMDGEHFHDAWE--IYYLVSGERCYFIKDQIYRIGAGDLVLIPVNVLHKTSPSGKLSQ 81 Query: 114 PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL 173 P + +N + LL G +E + A LS E ++LL M Sbjct: 82 PHERILVNFRTEVVSALLP--GREEELEQLFAKYP--VLRLSAEEQQLVQQLLARMLAEQ 137 Query: 174 DARILGKQIIREILYYVLTGPCGGALLALVSRQTHF----------SLISRVLKRIENKY 223 + G E +L L +R H I+ V + I Y Sbjct: 138 KQQAGGY---EEYCQLLLAELLLNLLRMANARPNHDGEEGGGKRPYREIAEVARYINAHY 194 Query: 224 TENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAM 283 ENLS+ LA ++S H F VT + + Y+ R+ +A ++ + + A Sbjct: 195 DENLSLSDLANRFHLSPYYLSHLFPRVTGLTLVAYINRVRIEEACALLRETELPVTEIAY 254 Query: 284 RVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 RVGY+S + F R FK+ V+P R + G Sbjct: 255 RVGYQSGTHFGRVFKKAKAVSPQSYRREQRMLSGG 289 >UniRef50_C3QA40 Putative uncharacterized protein n=3 Tax=Bacteroides RepID=C3QA40_9BACE Length = 288 Score = 182 bits (462), Expect = 1e-44, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 103/281 (36%), Gaps = 15/281 (5%) Query: 45 GLLPDVRLLYG-ETPFART--PVMYEP--GIIILFSGHKIGYINERVFRYDANEYLLLTV 99 + L P A+ PV Y I ++ + + + + V ++D + ++ Sbjct: 9 TPISSDDLFIVLNHPNAKFDYPVHYHSDYEINLVMNTYGERIVGDSVEKFDNLDLVMTGP 68 Query: 100 PLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEIL 159 LP + + + L +++ + + S + +L Sbjct: 69 NLPHAWKGEIVEGN--HVVTIQFSDKLLNFPILEKRLFSPIKQLLLDSQKGISFSENTML 126 Query: 160 CAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS-----RQTHFSLISR 214 E++L + ILY + T + L R + I++ Sbjct: 127 AMKEKILQL---TRMQGFHTVLEFLSILYDLSTADRHILVSNLYDTKDTIRTSKSRRIAK 183 Query: 215 VLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHD 274 V IE + E + + +AA NMS SAF H F+ T+ + + Y+ N R+ +A M+ Sbjct: 184 VCDYIEKNFEEPIKLGDVAALVNMSESAFSHFFRKKTNCTFIDYINNLRVARACQMLTET 243 Query: 275 GMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 + G+ + S F R FK+ G TP E ++ M Sbjct: 244 SHTVAEICYSCGFNNLSNFIRIFKKKKGNTPSEYRTILQQM 284 >UniRef50_Q2SE27 Putative uncharacterized protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SE27_HAHCH Length = 288 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 58/275 (21%), Positives = 100/275 (36%), Gaps = 11/275 (4%) Query: 49 DVRLLYGETPFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 R + Y P + + Y+ + V RY++ + +L+ LP Sbjct: 15 SWRFFLRQLDELPFQWHYHPEYELTYTLNSAGQRYVGDHVDRYESGDLVLIGPNLPHSWR 74 Query: 107 T--YATSEVPLAGLRLNVDILQLQELLMDIGE--DEHFQPSMAASGINSATLSEEILCAA 162 + + P L + + LL + E D + G+ + + Sbjct: 75 SSQRPDEDKPHTVYVLWFNQQWVDRLLENFPEYGDVGDILKQSRRGLTFSPTDHA---SV 131 Query: 163 ERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLI-SRVLKRIE 220 ERL + + R+L + L + P A + I +L Sbjct: 132 ERLFTALPTQGPKERLLTLLSLLGGLAQIPHTPLASANFCTGTTSRREQDILDGILDCAH 191 Query: 221 NKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASA 280 + + L++E +A NMSVS F F + S QYL RL +A +I+ + Sbjct: 192 LAFADKLTIEDMARRHNMSVSKFSRFFSKHMNQSFNQYLTQIRLGQACSKLINTAAPIAL 251 Query: 281 AAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 A + G+ + S F+R FK++ GVTP R A Sbjct: 252 IAEQTGFNNLSNFNRLFKKHKGVTPQGFRKRFTAA 286 >UniRef50_A6VU91 Helix-turn-helix-domain containing protein AraC type n=3 Tax=Oceanospirillales RepID=A6VU91_MARMS Length = 298 Score = 181 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 47/257 (18%), Positives = 103/257 (40%), Gaps = 10/257 (3%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEV-PLAGLR 119 R + + + + ++ + + Y + +L LP E L + Sbjct: 34 RWHAHDDYELHFIVATSGKVFVGDYIGNYSPGQLILTGPRLPHNWICQKDQEEVQLRDMV 93 Query: 120 LNVDILQLQELLMDIGEDEHFQP--SMAASGINSATLSEE-ILCAAERLLDV--MERPLD 174 + D + I E P + A SGI E + +++ D + R + Sbjct: 94 IRFDHESFSNGMKIIPELAEILPMLARAKSGIEFYDQDHEYLKDVFQKVRDSTGLSRLIL 153 Query: 175 ARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAA 234 A L +++ + Y +L+ + L S +T I+ V+ + Y++++++ +A+ Sbjct: 154 ALPLLQKLAQSRSYRLLSTVQ----IDLKSSETLQRKINTVVDYVSQNYSQDITLSSVAS 209 Query: 235 EANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFS 294 MS S F FK T ++++ R+ +A ++ + + +VG+ + + F+ Sbjct: 210 LIGMSDSHFSRFFKKATGNRFIEFVNRVRVSRACSLLTETDQQIATICFQVGFNNVANFN 269 Query: 295 REFKRYFGVTPGEDAAR 311 R F GVTP + + Sbjct: 270 RRFHELKGVTPRDFRTQ 286 >UniRef50_A3XKJ7 Transcriptional regulator n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XKJ7_9FLAO Length = 283 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 90/253 (35%), Gaps = 7/253 (2%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 + E + + SG + + V R+ + L+ LP + A + L L Sbjct: 29 KLHQHAEIQMSYILSGSGTLLVGDTVSRFKPGDVLVFGENLPHVFRSDANHQGLCHMLTL 88 Query: 121 NVDILQLQELLMDIGEDEHFQPSM--AASGINSATLSEEILCAAERLLDVMERPLDARIL 178 + + E + A+SG A + RL + + Sbjct: 89 FFNREGFGHDFFETEELKELDLFFKQASSGFRIADVDARFKREFIRLRSLANLERFMSFI 148 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 +++ EI T +S V + + E ++++++A A M Sbjct: 149 --KLLYEIHNT-SKELLSNFTNKTNYTDTEGQRMSNVFDYCLSHFKERITLDEIAEIAVM 205 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDG--MKASAAAMRVGYESASQFSRE 296 S +AF FK T+ + Q+L R+ A ++ S+ A G+ S S F+R Sbjct: 206 SPTAFCRFFKERTNKTFNQFLLELRIEHACQLLRTPDNQEAISSIAYTCGFNSVSNFNRY 265 Query: 297 FKRYFGVTPGEDA 309 FK+ GV+P Sbjct: 266 FKKQKGVSPRTYK 278 >UniRef50_A8SS64 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SS64_9FIRM Length = 328 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 89/240 (37%), Gaps = 9/240 (3%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 I I+ G + I + + +A + ++ E A + P + + + + ++ Sbjct: 78 IHIVKKGKGVFTIGGKSYELEAGQAFIIRPGE--ETIYKADDDDPWSYMWVGFHGYRAED 135 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 + +G + S I + +L+ + + + + + Sbjct: 136 FIESMGYKKD-------SPIIKIEQMDTCATCINNMLEYSQITRINEVKRQSALMMLFAT 188 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 ++ G + + I KY + ++ +A +S S +FK Sbjct: 189 IMEDNTSGQQENDNVEYPSKIYVKAAVDFITEKYMNKIKIDDIADFIGISRSHLTGSFKK 248 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 SP +YL N+RL KA ++ + + A + GYE + FS+ FK+ FG++P Sbjct: 249 EMGVSPQEYLINFRLEKAASLLRSSKEQINIIAYQCGYEDSLSFSKAFKQKFGMSPKSFR 308 >UniRef50_C4ZBY6 Transcriptional regulator, AraC family n=7 Tax=Clostridiales RepID=C4ZBY6_EUBR3 Length = 280 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 94/265 (35%), Gaps = 20/265 (7%) Query: 54 YGETPFARTPVMYEPGIIILFSGHKIGYINE-----RVFRYDANEYLLLTVPLPFECETY 108 + P R + + SG + + + + + L+ Sbjct: 31 HSFGPATRNHYL----FHYVLSGTGTLMADNAKGITQTYNIKSGQGFLIFPGQ--INTYI 84 Query: 109 ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDV 168 A ++P + + D L+++E L + + + E +L + Sbjct: 85 ADDKLPWEYIWIEFDGLRVKEALTT-------TELTKNNPVYHTHSKDIREKLVEEMLYI 137 Query: 169 MERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLS 228 P ++ + L Y++ L + + I + IE + ++S Sbjct: 138 TRHPSESPYHLIGHMYLFLDYLMQSAKSSKL--VPGGKMSDFYIKEAMNYIEQNFQNDIS 195 Query: 229 VEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYE 288 +E +A ++ S FK+ SP ++L NYR+ KA ++ + + VGYE Sbjct: 196 IEDIAGVCGINRSYLGKIFKNSVGHSPQEFLMNYRMIKATELLKLTSLSIADVGSAVGYE 255 Query: 289 SASQFSREFKRYFGVTPGEDAARMR 313 + FSR FK +GV P E + Sbjct: 256 NQLHFSRAFKNIYGVAPREWRNEHK 280 >UniRef50_C7PTR1 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PTR1_CHIPD Length = 298 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 97/293 (33%), Gaps = 5/293 (1%) Query: 29 LADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHK-IGYINERVF 87 L KV + + + E + ++ G I + + Sbjct: 7 LQKKVLREITSLGVHDCC--SIFFRHKRQFAFPLHTHEELELNLVLGGAGIQRIIGDHIG 64 Query: 88 RYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAAS 147 E +L+ LP T E + + L E ++ + + + Sbjct: 65 HIGHAELVLVGPNLPHGWFTLDDREEDILEVTLQFRKELFTEGFLNTELLHAIRKLLDNA 124 Query: 148 GINSATLSEEILCAAERLLDVMERPLDARILGKQ-IIREILYYVLTGPCGGALLALVSRQ 206 G + E+LL + + +G ++ E+ T + Sbjct: 125 GRGILFTPDVAERVYEKLLALDKMSGFDSFIGLLSLLHELSVAKDTTLLSSVSFSREEIV 184 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + + + + + Y +++ +A +MS ++F K+ T + + L RL Sbjct: 185 SESRQLEQAFEYMNRHYGNPIALTAIAKVVHMSEASFSRFMKAQTGLTFTENLVELRLGH 244 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM-RAMQGN 318 M++ + + A G+ + + F++ FKR+ G TP E + R M G Sbjct: 245 VARMLVTTQLTIAEIAYHCGFNNMANFNKLFKRHKGCTPKEYRSNYNRQMSGG 297 >UniRef50_A4TH83 Transcriptional regulator, AraC family n=23 Tax=Yersinia RepID=A4TH83_YERPP Length = 292 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 103/261 (39%), Gaps = 14/261 (5%) Query: 59 FARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGL 118 R + +I +G + + L V P E + + P L Sbjct: 42 HVRRQSVAGHELIFCLNGSGFIRLENNLHEVKKGNLAWLPVRWPHEH--FPNKQEPWEIL 99 Query: 119 RLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLD-ARI 177 L +D +L ++ + +A + T E I RL D+M+ A Sbjct: 100 WLRIDGAKLNNIMQIL--------DVAQQPVFEFTSPETITDIYHRLFDLMQSHTLVADA 151 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 + +++Y +L A + V + R++ +I + Y ++ +++ Sbjct: 152 HCDVLCSQLIYTLLENRSFDATKSPVI---SHRGLGRLIYQIHSHYNDDWDIDKFMQYCQ 208 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 +S S F+ + SPL++LKNYRL +AR +++ S A VGY FSR+F Sbjct: 209 VSKSQLFRLFQETFNQSPLRWLKNYRLSQARRLLVETEETISRIAGLVGYNDPLHFSRDF 268 Query: 298 KRYFGVTPGEDAARMRAMQGN 318 R G++P + + R + + Sbjct: 269 HRSVGLSPSDFRRQERQLDND 289 >UniRef50_A5ZHU6 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZHU6_9BACE Length = 284 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 43/257 (16%), Positives = 90/257 (35%), Gaps = 6/257 (2%) Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY---ATSEVPLA 116 A+ + + G+ + + + A + L+ + E A + + Sbjct: 31 AKLHRHDAWELYYVVHGYGKRMAGDTLQPFAAGDVALIPPSMLHHWEYSPDSADDDGYVR 90 Query: 117 GLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDAR 176 L + ++ + E + + N+ R+L M + Sbjct: 91 YLMVAFSHSLVERCMAVFPELRNRLTGI-TFPTNALKFGTGSSQTIRRILSQMNDMDELG 149 Query: 177 ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236 L + +L + T ++ + + ++ + Y +S++ +AAE Sbjct: 150 RLCEMFR--LLPAIFTSSDHTFAGKPMNIERDVRRMQQICVYVMTHYIHTISLDDIAAEV 207 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 M+ SAF FK + QY+ YRL+ A ++ H + S VG+ F R Sbjct: 208 GMNRSAFCSYFKRCKGMTFSQYVTQYRLNTACELLKHSQKQVSEICFTVGFNDLPHFVRV 267 Query: 297 FKRYFGVTPGEDAARMR 313 FK G++P + R + Sbjct: 268 FKNTLGMSPSKYRRRFQ 284 >UniRef50_Q3JM08 Transcriptional regulator, AraC family n=53 Tax=Burkholderiales RepID=Q3JM08_BURP1 Length = 339 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 100/275 (36%), Gaps = 13/275 (4%) Query: 48 PDVRLLYGETPFARTPVMYEPG--IIILFSG-HKIGYINERVFRYDANEYLLLTVPLPFE 104 R + P + P I ++ G ++ + + + ++ LP Sbjct: 14 ESFRAWSHDYPHTVAKWHFHPEYEIHLI-QGSRGKFFVGDHIGDFAPGNLVVTGPNLPHN 72 Query: 105 CETYATSEV--PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAA 162 + P + L ++++ E + + + E L A Sbjct: 73 WISELGPGERVPSRDVVLQFSRDAAEKMVAAFAELQPVLDLIDEASRGVQFPDEIGLAVA 132 Query: 163 ERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALL----ALVSRQTHFSLISRVLKR 218 +L++ R+ +++ + + + L + ++ S I++VL Sbjct: 133 PLMLELASAHGCRRV---EVLMALFDRLASCAARRTLAGPGYRIDAQHYMSSTINQVLAY 189 Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 + L +A A MSVS F F+ T ++ +QYL R+++A +++ + Sbjct: 190 LRQNLPGALREADVAEFAGMSVSTFTRFFRRHTGSTFVQYLNRLRINEACELLMCSALSV 249 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + R+G+ + S F+R+F G+ P A R Sbjct: 250 TDICYRIGFNNLSNFNRQFLAMKGMPPSRFRALHR 284 >UniRef50_A8RR78 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RR78_9CLOT Length = 281 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 94/252 (37%), Gaps = 7/252 (2%) Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLR 119 YE I L SG +IN+ ++ + + ++ + + E Sbjct: 35 PHYHSYYE--IYYLLSGKCKMFINQDIYYLEPGDMTIIPPLEVHKALYEPSWEA--ERFG 90 Query: 120 LNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDA-RIL 178 + + L G + + +I ++ D ++ +I Sbjct: 91 IYFSRDTVTSFLSLCGREAFGHIFSQPKRTIPSEFRPKIEELLAQMQDEEKQGDSYCQIQ 150 Query: 179 GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 ++ +IL + G C A + + + R + + Y E +++ Q+AA ANM Sbjct: 151 LCSLLHQILVVL--GRCQEARREGHALEEAEEAMVRAARYMNQHYQEGVTLGQVAAFANM 208 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 S + F FKS T +YL R+ KA M+ + + + AM G+ + F F+ Sbjct: 209 SPTYFSKKFKSSTGLCFKEYLNYIRVQKASDMLRNTDLSVTGVAMACGFSDGNYFGDVFR 268 Query: 299 RYFGVTPGEDAA 310 R GV+P E Sbjct: 269 RLTGVSPREYRK 280 >UniRef50_A4VLS2 Transcriptional regulator n=6 Tax=Pseudomonas RepID=A4VLS2_PSEU5 Length = 377 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 83/225 (36%), Gaps = 2/225 (0%) Query: 86 VFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMA 145 A ++ L P+E A + L + + + + ++ + ++ Sbjct: 154 TMNVRAGDFFLTDTDEPYEMRWQALEGERFEVMHLYLGLPLIDQAARELLGPQSTSVALL 213 Query: 146 ASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSR 205 ++ R ++++RP + + + + + + ++L S Sbjct: 214 DVSGARDETVRWLMDQLRR--ELLDRPQASPLYVRGLAQALAVHLLRHYRDPHGGVRRSN 271 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 + +V+ + + E S+ LA +S F FK T SP QY R+ Sbjct: 272 ALPAYKLRKVIGVMNERLAEEFSLAALAQVVELSEYHFSRMFKRATGLSPSQYFIGLRMA 331 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 +AR +++ + VGY S S FS+ F+R GVTP Sbjct: 332 RARQLLLETPRSIIDIGLEVGYSSPSHFSQVFRREVGVTPSIYRQ 376 >UniRef50_B1Y6T0 Transcriptional regulator, AraC family n=4 Tax=Burkholderiales RepID=B1Y6T0_LEPCP Length = 315 Score = 180 bits (458), Expect = 4e-44, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 97/275 (35%), Gaps = 17/275 (6%) Query: 49 DVRLLYGETPFARTP---VMY--EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPF 103 DV L+ TP Y E + ++ S ++ + + ++ + +L LP Sbjct: 36 DVGLIRCLEHGFPTPLARWHYHDEYELHLITSTSGKVFVGDWIGQFQPGQLVLTGPRLPH 95 Query: 104 ECETYATSEV--PLAGLRLNVDILQLQELLMDIGEDEHFQPS--MAASGINSATLSEEIL 159 + E PL L + L I E P A GI +S+ Sbjct: 96 NWVSMDVPEGGVPLRDLVIQFPHEPLVRAAETIPELAELLPLLERARHGIEFFGISDRAQ 155 Query: 160 CAAERL---LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVL 216 +R+ + L Y +L+ L V I V+ Sbjct: 156 AHWQRVKASRGLRRFTEFCTFLCDLSACTD-YRLLSNVQ----LQSVDDDHSLDQIDAVV 210 Query: 217 KRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM 276 R+ + + +S +AAE MS S F F+ T + ++ R+++A +++ Sbjct: 211 MRLTDNLAQPISAADVAAELGMSESRFSRFFRRATGNTFTDFVNRVRINRACQLLMESDR 270 Query: 277 KASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 + VG+ + + F+R F G+TP E + Sbjct: 271 LITHICYEVGFNNVANFNRRFLEIKGMTPSEFRKQ 305 >UniRef50_A8RL67 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RL67_9CLOT Length = 272 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 99/273 (36%), Gaps = 14/273 (5%) Query: 47 LPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECE 106 + R+ +++ + L G + I +R++ E+L+ + Sbjct: 8 IAGERIQGVNDNMSKSHYHDYFELYYLEEGERFHIIQDRLYCIHPGEFLIFSPY--VMHH 65 Query: 107 TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLL 166 +Y VP L + ++ + + G + R+L Sbjct: 66 SYGQENVPFKRLLVYFSKEEVDSV---------QLLKVLEKGTGVYKPDQREKQVVHRML 116 Query: 167 DVMERPLDAR-ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTE 225 D + + D + I +L L + + + I+ V+ I Y E Sbjct: 117 DDLLKEQDDPQAYHEDYIHTLLNMAL--LTIARNIQTPVKPEKRNRITDVISYIHQNYQE 174 Query: 226 NLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRV 285 ++S++QLA + +S FK T+++ +QY+ R+ A+ M + + + Sbjct: 175 DISIDQLAQMSYVSPYYLCREFKRYTNSTIIQYVNVTRVMNAQRMFMETNKNITEISRDT 234 Query: 286 GYESASQFSREFKRYFGVTPGEDAARMRAMQGN 318 G+ + + F+R FK G+TP + G+ Sbjct: 235 GFSNITHFNRVFKSVMGMTPSNFRKMYKTEAGH 267 >UniRef50_B1HZP2 Putative uncharacterized protein n=2 Tax=Bacillaceae RepID=B1HZP2_LYSSC Length = 276 Score = 180 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 106/261 (40%), Gaps = 18/261 (6%) Query: 51 RLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 R+ GE RT + GII+ +G I +N + + + +P E + Sbjct: 24 RMEPGEVDLGRTTAPEKCGIIVPLAGSAIFSLNGTPYVMEPGVIVHAGPQMPIEVNVTSQ 83 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 A + N+ + E+ P + + + +I+ ++L++ Sbjct: 84 KVWEYAVVHYNLPM-----------EETALYPLVEQHFLIKTGHNTQIITQVQQLVESYS 132 Query: 171 RPLDARIL-GKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 P + + K + +L ++L L L+ + L+ I Y E +SV Sbjct: 133 FPGNMAVFKSKTLFMNLLEHILIAAKVKVL------DNANELMEQALQYIHEHYAEQISV 186 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 +++E ++ F + F+ T +P +Y+ YR+ +A+ ++ + G+ + A VGY Sbjct: 187 SNISSEFDIERRRFAYLFEQHTGMNPSKYITEYRIRRAKDLLEYGGIPVAEIAECVGYVD 246 Query: 290 ASQFSREFKRYFGVTPGEDAA 310 FSR FK+ G++P Sbjct: 247 CFYFSRVFKKCTGLSPSAYRK 267 >UniRef50_C6D3B4 Transcriptional regulator, AraC family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D3B4_PAESJ Length = 300 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 98/264 (37%), Gaps = 14/264 (5%) Query: 51 RLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 RL R + +I + G + + ++ T P A Sbjct: 50 RLQTRSLSRNREHGRVDFQLIYITGGKGRFRFHNETIEVPSGSLVVYTPGQPQHYSYQAE 109 Query: 111 SEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME 170 ++ + L G +++ + +++ ++++ + Sbjct: 110 DG--TEVYWIHFTGYSAYDYLQQFGLL--------TQPVHTVGIIDDVTALFKKIIQELN 159 Query: 171 RPLDA-RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSV 229 + + E+L + Q I++++ I KY+E+LS+ Sbjct: 160 SHRPLGSHMVNAYLLEMLTLLGRRLQTA---EEPGAQGRHPDINQMIAFIHEKYSESLSI 216 Query: 230 EQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYES 289 LA E ++SV F H FK VT +P++Y+ R+++A+ ++ + A VGY++ Sbjct: 217 SDLAGECSLSVFRFIHKFKEVTGMTPMKYITEIRINEAKKLLSESSLHVKEVAAVVGYDN 276 Query: 290 ASQFSREFKRYFGVTPGEDAARMR 313 FSR F+ G+ P E + + Sbjct: 277 PLYFSRIFRSTVGIPPSEYKKQFQ 300 >UniRef50_A7VQ18 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ18_9CLOT Length = 280 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 45/255 (17%), Positives = 88/255 (34%), Gaps = 8/255 (3%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 + GH +N + +++++ + L + + Sbjct: 29 HCHKHMELDYCSEGHCTIKVNGESYDCQPGDFVII----HTMEDHTLIRNSDCKLLGVQM 84 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG-KQ 181 D+ L E ++ P + SG + E +L + + G + Sbjct: 85 DLSVLDTAFSPFYESQYLVPFIRGSGKYQRRIRVPKGSLLESILSEILVEYQKKQPGYEM 144 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFS---LISRVLKRIENKYTENLSVEQLAAEANM 238 I+ + + + ++ + R +F I V+ +E LSV A A M Sbjct: 145 YIKGDILRLFSCLVRTKVIEIGERNVNFQDLERIKPVIDYMEQHIETELSVAAAAKIACM 204 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 S F FK V + ++Y R+ +A ++I + A G+ S + F+R FK Sbjct: 205 SYYHFCRLFKKVIGKTFVEYQNFIRIRRAEKLLITTDRTITNIAFETGFGSVAYFNRVFK 264 Query: 299 RYFGVTPGEDAARMR 313 + G P +MR Sbjct: 265 KETGQAPANYRKKMR 279 >UniRef50_C3QPX4 Transcriptional regulator n=9 Tax=Bacteroides RepID=C3QPX4_9BACE Length = 325 Score = 180 bits (457), Expect = 6e-44, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 100/280 (35%), Gaps = 25/280 (8%) Query: 51 RLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT 110 R E II + G + + + Y + +L LP ++ Sbjct: 52 RFYEYPRFTYPWHFHSEYEIIYVEKGEGDCLVGDSIISYSKGDLILFGSELPHSMQSPPD 111 Query: 111 SEVP----------LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 + G+ + + + + + + + I Sbjct: 112 GGEESDNEEKSELKVRGVNIQFEKDFMHYSISQYSQFIPIRNLLE-------DACRGIKF 164 Query: 161 AAER---LLDVMERPLDARILGKQIIREILYYVL-TGPCGGALLALVSRQTHF----SLI 212 R ++ ++++ A+ + + I+ L ++ T L + + Sbjct: 165 TITRSGKIIKLLKQIPSAKGVDQIILLLSLLQMMATSNHRKYLTTSHYTPSPSIMRNERM 224 Query: 213 SRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMII 272 +V+ + YTE++ ++++A+ M+ +AF FK T + +Y+ + R+ A ++ Sbjct: 225 EKVIAYLNKHYTESIGLDEIASYTAMNPTAFCRYFKENTGKTFKEYVLDMRIGYACKLLN 284 Query: 273 HDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 M S + G+ES F+R FKR G+TP +M Sbjct: 285 SSMMNISQISATCGFESPVHFNRIFKRVTGMTPTFYREQM 324 >UniRef50_C5RKC4 Transcriptional regulator, AraC family n=1 Tax=Clostridium cellulovorans 743B RepID=C5RKC4_CLOCL Length = 292 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 98/283 (34%), Gaps = 9/283 (3%) Query: 34 NKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANE 93 K + + + + G F E + + SG + I ++ + A E Sbjct: 9 EKATHGTALIPIAIRHLNYAEGLENFFYLHWHSEFEFVYILSGAILYSIEDKEYCVKAGE 68 Query: 94 YLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSAT 153 L + ++ + +P + + P + + Sbjct: 69 GLFIHSNQLHAARSF--NGMPCEACVVLFHPNLFGHNKQSSTYSKFIYPILEGDLVFENY 126 Query: 154 L--SEEILCAAERLLDVMERPL-----DARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 EE +LL ++ + +L K I EI + A +R Sbjct: 127 FKCEEEWQRLVMKLLSELDDLKYENVSENELLLKSKIFEIWHLCYKNSVALAPQGRKNRN 186 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + VL I Y E +++ LA MS F H FK V + SP+ Y+ +R+ + Sbjct: 187 YKLERMQPVLNYIHENYKEEITLMALAKILPMSEGQFCHAFKEVMNISPIAYVIRHRILQ 246 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + ++ K + A VG+ + S F+REF + G +P + Sbjct: 247 SCTLLTETDWKIADIARNVGFNNISYFNREFIKAIGCSPSKYR 289 >UniRef50_C6LHD5 Putative transcriptional regulator YfiF n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LHD5_9FIRM Length = 288 Score = 180 bits (456), Expect = 7e-44, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 103/259 (39%), Gaps = 16/259 (6%) Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLR 119 + YE I L G + + + ++ E +L + + +Y +++P + Sbjct: 42 SHYHNYYE--IYYLEDGERYHMMQDDMYDMKPGELILFSPYI--MHRSYGENDMPFKRIV 97 Query: 120 LNVDILQLQ--ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARI 177 L + ++ ELL + E+ AA+ +++ E L+ E P D Sbjct: 98 LYFESSEVASKELLDALDENNGMYRPDAATR-------QKLHRMLEELIRQYENPSD--- 147 Query: 178 LGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN 237 K R +L L + ++++ I + Y E++++EQLA + Sbjct: 148 FYKSYRRTLLNMFLFTMLMHTRRREPEQMEETGRTTQIVSYIHSHYQEDITLEQLAQKFY 207 Query: 238 MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREF 297 +S FK T+++ +QY+ R+ A+ ++ + + G+ + + F+R F Sbjct: 208 VSQFYLCREFKRYTNSTVVQYVNVTRVMNAQRKLMETDKTITEISRETGFSNLTHFNRVF 267 Query: 298 KRYFGVTPGEDAARMRAMQ 316 K G TP + MQ Sbjct: 268 KSVTGTTPSGYRKHHQNMQ 286 >UniRef50_A6FIS9 Putative transcriptional regulator (AraC/XylS family) n=1 Tax=Moritella sp. PE36 RepID=A6FIS9_9GAMM Length = 309 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 111/282 (39%), Gaps = 10/282 (3%) Query: 43 LSGLLPDVRLLYGETPFARTPVMY-EPGIIILFSGHKIGYINERVFR--YDANEYLLLTV 99 G + + R + +P + +G K+ + + + + +E +L Sbjct: 27 YDGPESQLSIYDTFQQAKRVELKSDQPLFCAMLTGKKVMHTQDSSYDSDFVPHESFVLAP 86 Query: 100 PLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGED----EHFQPSMAASGINSATL 154 E + A+ P L + + ++ ++ ++ F P + Sbjct: 87 SQSVEIDFPVASLAAPTRCLAIEITTERINQIADNLNAQVEKYSEFGPWQYQQQLLHTHH 146 Query: 155 SEEILCAAERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLIS 213 + + +R+ ++ D + + E+ +L +++ +Q S ++ Sbjct: 147 NAQTQALLQRMTELYIGDDPDRSYMINLAVSELTVRLLRQQSRDFMMSFCQQQPDHSGLT 206 Query: 214 RVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIH 273 + I E + +EQL + M + F + FK +PL + + RL KA +I Sbjct: 207 MAIDYINQHLHECIEIEQLCRISCMCRTKFFNQFKLQFGCTPLAFQQQQRLKKATELIK- 265 Query: 274 DGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAM 315 GM+ + + +G+ S+S FSR FKR++G++P R + M Sbjct: 266 TGMQITLVSFELGFISSSHFSRIFKRFYGLSPKSYQHRHKTM 307 >UniRef50_A4ATK5 Transcriptional regulator n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ATK5_9FLAO Length = 288 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 103/265 (38%), Gaps = 12/265 (4%) Query: 58 PFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYAT----SEV 113 P Y+ ++I+ G ++ + + ++A + +L LP T + Sbjct: 28 PHWHFHNEYQ--LVIVLEGTGTRFVGDDISHFEAGDMVLTGSNLPHVWRNDETYFQGLSL 85 Query: 114 PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPL 173 + + + ++ ++ E + + + S +S EI ++++ M R Sbjct: 86 VTHCIVIYFSLDFMEGEFLNKEEMKGIRELLDRSHRGL-EISGEIRDTVKKIMCDMLRLK 144 Query: 174 DARILGKQIIREILYYVLTGPCGGALLALVSR---QTHFSLISRVLKRIENKYTENLSVE 230 G + +IL + + + + + I + + ++ +E Sbjct: 145 GFD--GVLSLLQILNILSSQKLKFINKEGYLNTVTDSDSKRMRTIHSYILDNFKGDIRLE 202 Query: 231 QLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESA 290 ++A+ AN+S ++F FKS T+ + ++ R+ A ++ + + A GY + Sbjct: 203 EVASLANLSPTSFSRYFKSHTNKTFSNFVAELRIGAACKLLHSNDLSILGIAHECGYNTL 262 Query: 291 SQFSREFKRYFGVTPGEDAARMRAM 315 S F+++FK +P R + + Sbjct: 263 SNFNKKFKELTNDSPLRYRKRYQKI 287 >UniRef50_A6LH31 Transcriptional regulator n=5 Tax=Bacteroidales RepID=A6LH31_PARD8 Length = 293 Score = 179 bits (455), Expect = 9e-44, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 104/277 (37%), Gaps = 14/277 (5%) Query: 48 PDVRLLYGETPFARTPVMYEPGI--IILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC 105 + + P P Y P I + + SG ++ + V Y + ++ LP E Sbjct: 14 SHIHFYVEDLPHFIVPWHYHPAIEIMYITSGTGTRFVGDHVEGYFEGDVCMIGPQLPHEW 73 Query: 106 ETYA-----TSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC 160 +S + + L + L+ + E + + + S + + Sbjct: 74 RNDPVYFDKSSGLRATCICLFFKRQIFEPNLIRLPEMNNIRELIERSRRGIKFVGKSRKK 133 Query: 161 AAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA----LVSRQTHFSLISRVL 216 L+ A + K I +L + T L + F ++V Sbjct: 134 -IAELISQSANETGASRVIKLIA--LLELMATSEEYEILASTGFTETVNSDDFERFNKVY 190 Query: 217 KRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGM 276 K + +T + +E++AA ++ +AF FK T + ++YL + R+ A+ ++I + Sbjct: 191 KYLVKNFTSPVKLEEVAALVGLTPTAFCRYFKKRTKKTFVEYLNDMRIGHAKKLLIEGNL 250 Query: 277 KASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 K S + G+ + S F +FK+ + P E + + Sbjct: 251 KISTISSEAGFNNLSNFIGQFKKTTNMLPSEYQKKYK 287 >UniRef50_D2QN46 Transcriptional regulator, AraC family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QN46_9SPHI Length = 288 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 53/275 (19%), Positives = 101/275 (36%), Gaps = 17/275 (6%) Query: 53 LYGETPFART---PVMYEPGI--IILFSGHKIGYINERVFRYDANEYLLLTVPLPFECET 107 + A + + P I ++ G + +++ R++ + LLL LP + Sbjct: 16 FRIDQDNAPYFYGQLHFHPEIQLTLIQQGEGTLIVGDKIDRFNPYDVLLLGANLPHVLRS 75 Query: 108 YATSEVP-----LAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAA 162 P + + L++ ++++ E H + + L A Sbjct: 76 DTDYYQPESTRRATSVSVLFKPEHLEKTMLNLPETRHLTTLLQEAQHGV-RLRCGTENAL 134 Query: 163 ERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALV----SRQTHFSLISRVLKR 218 +LL+ + P + ++L + P L A R + +V Sbjct: 135 TQLLE--DIPEKRPFEQLLGLLQVLDNLAANPEREVLSATAYAQPQRPDDQRRLEQVFSY 192 Query: 219 IENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKA 278 I +Y +S++ +A AN++ AF F+ T + Q L R+ A + Sbjct: 193 ILQRYASPISLDDVANVANLTPGAFCRFFRQHTRKTFSQLLNEVRIEHACRYLRESQENI 252 Query: 279 SAAAMRVGYESASQFSREFKRYFGVTPGEDAARMR 313 S A+ GY + S F+R+FK G+ PGE R Sbjct: 253 SQIALNCGYTNLSNFNRQFKEIVGMPPGEYIRSYR 287 >UniRef50_B2GEN0 Transcriptional regulator n=1 Tax=Lactobacillus fermentum IFO 3956 RepID=B2GEN0_LACF3 Length = 278 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 45/244 (18%), Positives = 94/244 (38%), Gaps = 13/244 (5%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 I + SG I ++ + A + L+ A E P + + L Sbjct: 43 IHYILSGSGIFKVDNVTYHLHAGQGFLIVPNC--RTTYIADKETPWSYVWLGFTGKSAAT 100 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 + I + ++ S E+ +L + ++ + L Y Sbjct: 101 WIDQIN-------ISEIRPVFNSNKSYELANCVNEILALDNLSMENNLRALSCFFRFLSY 153 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 + TG A +++ ++ I + ++ ++VE LA N++ S FK Sbjct: 154 IATGTVINIQQA---NSEKNHYVTQAIQYISHHLSK-VTVESLAHAVNLNRSYLTSLFKH 209 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +P +Y++N+R+ KAR ++ + A + GY+ + F+R FKR +G++P + Sbjct: 210 DLDLTPSEYIQNFRITKARHLLESSDISIDQVAEQCGYQRTNSFTRVFKRTYGISPRQYR 269 Query: 310 ARMR 313 + Sbjct: 270 QETK 273 >UniRef50_Q2SKY5 AraC-type DNA-binding domain-containing protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SKY5_HAHCH Length = 302 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 110/300 (36%), Gaps = 10/300 (3%) Query: 22 REEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFART-PVMYEPGIIILFSGHKIG 80 + A + +L S +G ++ + P R E + SG KI Sbjct: 1 MTRAIAIAAREPRELIENRVSFAGPNSELSVYDTYLPAQRVGLSADELLYCGMISGRKIL 60 Query: 81 Y-INERVFRYDANEYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIGEDE 138 + ++ + E ++ + A + P + L + + ++ + + + Sbjct: 61 HGRDDYTAEFLPQESFVMAPGETISIDFPDAELDRPTSCLTVEISRTRVDSICSHMNKVA 120 Query: 139 HFQPSMAASG-----INSATLSEEILCAAERLLDVM-ERPLDARILGKQIIREILYYVLT 192 + ++ ER++ E D IL + E++ +L Sbjct: 121 PLHKDFEEWRYRTETLIHTPHTQATQALLERMIATFSENGPDRDILIDLGVSELVVRMLR 180 Query: 193 GPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTS 252 LL RQ + ++ L I+ T+ L ++QL A MS S F FKS Sbjct: 181 QQTRAFLLGACERQPDINGLAAALSHIQKHITQPLDIDQLCKIACMSRSRFFTEFKSHFG 240 Query: 253 TSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARM 312 +P ++ + RL +A + + +GY + S FSR F+R +G +P + ++ Sbjct: 241 CTPAEFQQQLRLQRAGERLRQGE-SVTRVCFDLGYRNLSHFSRRFQRQYGRSPSQYQKQL 299 >UniRef50_Q0TTY3 Transcriptional regulator, AraC family n=8 Tax=Clostridium perfringens RepID=Q0TTY3_CLOP1 Length = 285 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 114/282 (40%), Gaps = 14/282 (4%) Query: 31 DKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEP-GIIILFSGHKIGYIN-ERVFR 88 D+ ++ + + + E + T YE + + G K IN Sbjct: 2 DRFDRQLELADGIETEYLRILYYTFEKNYKDTYKSYEYKRLCTIVDGEKNVRINNGENII 61 Query: 89 YDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASG 148 YD+++Y+LL E P L L ++ + + + + + + Sbjct: 62 YDSSKYMLLPPN----SSVEMKIEKPTKALVLELNEDLINTVSEKLSYELDVDLNKSILE 117 Query: 149 INSATLSEEILCAA-ERLLDVM-ERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 + E++ +R+++ + + L +EI Y +L +++ Sbjct: 118 KPFFNENNELIELTTKRIVETATKDTNNKEFLLDLYAQEITYSLLNTKGAKDIISSDFNN 177 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 I+R ++ ++ N++V ++A + NMS+ +F FK +P YL + +L++ Sbjct: 178 P----INRSIQIMKGNLKNNITVSEIAYDLNMSLPSFSSKFKKAMGMTPNDYLTSLKLNE 233 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGED 308 A ++ + A +GYE+ S F + FK+ FG+TP + Sbjct: 234 AARLLKFS--SVTEVAYDLGYENISHFIKLFKKKFGLTPKQY 273 >UniRef50_C6LA91 Putative transcriptional regulator n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LA91_9FIRM Length = 288 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 93/241 (38%), Gaps = 12/241 (4%) Query: 80 GYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEH 139 + R F E+ + E + S P + + L L DI + Sbjct: 52 LTVRGRSFTLHPGEFCFINSGELHEIK----SGGPSLHHAIVFNPDILDFTLYDICQHSF 107 Query: 140 FQPSMAA-------SGINSATLSEEILCAAERLLDVMER-PLDARILGKQIIREILYYVL 191 +P + + S S+ IL + ++ + P A + K I +IL Sbjct: 108 IRPVTSGNLIFPTLPSVFSPEESQMILFHMQEIIRLYHTLPSCASLSIKIHILQILELFF 167 Query: 192 TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVT 251 C + + + +V++ I Y +S+ LA MS + F H FK Sbjct: 168 QADCFLENTISSKEKDSQNKLKKVIEYIHENYAGPISLPDLAKICFMSPNYFCHYFKQEI 227 Query: 252 STSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 P+ ++ YR+ KA ++ + S A+ VG+++ S F R+F+ Y VTP E + Sbjct: 228 GKPPIAFINEYRIQKACQILTDSELPVSQVAISVGFDNFSYFIRKFREYKNVTPTEYRSH 287 Query: 312 M 312 + Sbjct: 288 L 288 >UniRef50_C5RL17 Transcriptional regulator, AraC family n=2 Tax=Clostridium cellulovorans 743B RepID=C5RL17_CLOCL Length = 282 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 92/243 (37%), Gaps = 10/243 (4%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 I +FSG IN + ++ + L++ A + P + + ++ Sbjct: 45 IHYIFSGKGSFEINGYTYNLESGQGFLISPG--DIATYKADDKDPWTYAWVEFNGRLSEK 102 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 L IG + + + S + + + + + D ++ + +L + L Sbjct: 103 FLHQIG-------LSSKTPVFSCKKKDLLEASFQYIFDACKKSRNNNLLILSSLYHFLAM 155 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 + + + I + + IE Y NL + ++A +++ + FK Sbjct: 156 IHEASAPEQT-EKNTEKLKDYYIHQAMIFIEKNYYRNLCISEMAKYLSLNRNYMSTLFKE 214 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 +P YL NYR+ KA+ ++ + + + VGY FSR FK+ FG+ P Sbjct: 215 SVGITPQAYLINYRMDKAKELMKNSSLTIGEISSLVGYNDPLMFSRMFKKLFGIPPKNYR 274 Query: 310 ARM 312 + Sbjct: 275 NSI 277 >UniRef50_C0FP55 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP55_9FIRM Length = 279 Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 101/271 (37%), Gaps = 20/271 (7%) Query: 52 LLYGETPFARTPVMYEP--GIIILFSGHKIGYINERVFRYDANEYLLL--TVPLPFECET 107 + F Y P I L SG+ IN ++ +++L+ + F + Sbjct: 17 FAERDADFHMDRFHYHPYYEIYFLLSGNCSALINHSIYHLVPGDFVLIPQSAMHRFVYDC 76 Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 +T + ++ DI E P L+ + A RL D Sbjct: 77 NSTVKRYNLFFTMDFAASLFHSDTKDILEHLFHYP--------VLHLTSLLQGNATRLFD 128 Query: 168 VMERPL-----DARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENK 222 + + ++ + I IL ++ L L + + I + I Sbjct: 129 TLYQETVGQDSCSQAVIPAYISLILSLLVRNRDHIQLQDL---DSAENAIQASARYISTH 185 Query: 223 YTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAA 282 + E +S+ +A +MS + + FK +T +YL RL++A ++ H + + A Sbjct: 186 FQEPVSLHMVADYVHMSPTYYSKKFKQITGVGFKEYLTKTRLYEATELLTHTSLNVTEIA 245 Query: 283 MRVGYESASQFSREFKRYFGVTPGEDAARMR 313 +R G+ + F F++ FG++P + R + Sbjct: 246 IRCGFNDGNYFGDAFRKEFGLSPLQYRKRQK 276 >UniRef50_UPI0001744FFC activator protein MtlR n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744FFC Length = 313 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 98/289 (33%), Gaps = 13/289 (4%) Query: 36 LKNKENSLSGLLPDV---RLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDAN 92 E ++ ++ G+ E I ++ G + +++ R Sbjct: 26 HLVVEKPSPLAASELVACEVVRGDDFGCVWHHHPECEITLVLRGGTERMVGDKLTRLRPG 85 Query: 93 EYLLLTVPLPFECETY---ATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGI 149 + LL LP + + + + L + + + + S + Sbjct: 86 DLTLLGPDLPHDYRNEHPATGRGQRVQAIVVQFMPDLLGKGWLQHASMQRVRQLFHRSRL 145 Query: 150 NSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLA----LVSR 205 AA R+ + R++ ++ EIL + + + + Sbjct: 146 GLEVRGPTRRRAALRMKQLSRATGLRRVV---LLLEILEDLAVSRELVEIASPGFHAPAA 202 Query: 206 QTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLH 265 ++ ++ IE+ L V LA A +S SAF FK T S QYL R+ Sbjct: 203 HGPTDRVAPIIAHIESHLATPLHVRDLALMAGLSESAFSRLFKKSTGRSVPQYLNELRIG 262 Query: 266 KARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRA 314 +A ++ + A GY S + F R+F R+ +P A +RA Sbjct: 263 RACRLLAETDDTVARIATACGYPSPANFQRQFHRHQQRSPLAYRAAVRA 311 >UniRef50_A3HVZ7 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVZ7_9SPHI Length = 288 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 107/275 (38%), Gaps = 25/275 (9%) Query: 49 DVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY 108 + + + ++ G + + V R++ + LL +P + Sbjct: 24 GMHFYNNLHQHP------QCQLTVIIEGRGQLLVGDYVGRFEPGDLFLLGENIPHVFRSD 77 Query: 109 A---TSEVPLAGL--RLNVDILQLQELLMDIGEDE---HFQPSMAASGINSATLSEEILC 160 A E L+ L D +++ L ++ E H + T + IL Sbjct: 78 AEYFDEENKLSSSGNTLFFDFKAIEKSLGEVDEFRELIHLNEQINGCFKIEGTAKKSILE 137 Query: 161 AAERL-----LDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRV 215 + L+ +++ + L K +EI+ L +L R + +V Sbjct: 138 LFQNFSSCSGLEKLQKAIHMLSLIKVGSKEIIALNL----IPVTRSLSERDGK--RMDQV 191 Query: 216 LKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDG 275 ++ I + +S++++A +A MS AF FK T + QYL+ R+ +A+ +++ Sbjct: 192 MRYILENSAKPISLDEIAEQAYMSKEAFCRFFKLRTRRTFTQYLQQLRITEAKKLLLETD 251 Query: 276 MKASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 + S + +VG+++ S F++ FK TP Sbjct: 252 LGISQISYQVGFQTLSHFNKTFKSMTNQTPKSWRK 286 >UniRef50_B0AA61 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA61_9CLOT Length = 300 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 97/258 (37%), Gaps = 9/258 (3%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 E +I + SG Y++ F + + + + + A + L Sbjct: 45 HWHEEIEVIRVKSGSIHLYLDNSDFVLNEGDGVFINSNI--LHYIRAGTSEECILNSLVF 102 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGIN------SATLSEEILCAAERLLDVMER-PLDA 175 + + + + E P + ++ + + EE + E+ Sbjct: 103 NKNLISGGVQSVFEQNFVNPIVENKNLSGIAFYKNTSWGEEASACIKNAFSQFEKSEFGY 162 Query: 176 RILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAE 235 IL ++ + I Y +L L + I +L + Y + +++ +A Sbjct: 163 EILVREYLSHIWYIMLKNIQDLNLNKNNRNDLNSERIKNILSFVHKNYNKQITLNDIAKV 222 Query: 236 ANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR 295 N+S FK+ SP+QY+ YR+ A M+ + + + VG++S S FS+ Sbjct: 223 VNLSERECLRCFKNTLGISPIQYILKYRVSIATKMLRENKDPITIISDAVGFDSPSYFSK 282 Query: 296 EFKRYFGVTPGEDAARMR 313 FKR+ G+TP + + + Sbjct: 283 IFKRFIGITPTQYRNKSK 300 >UniRef50_A8RPA3 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A8RPA3_9CLOT Length = 339 Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 48/255 (18%), Positives = 95/255 (37%), Gaps = 6/255 (2%) Query: 61 RTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRL 120 + II + G + ++ + A E +++ + + + Sbjct: 82 PVHWHEDMEIIAVKKGRGVVTVDMEPYEARAGEAVVVFPGQLHGISQCGSEAMEYENIIF 141 Query: 121 NVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILC--AAERLLDVMERPLDARIL 178 L D+ + +P ++ + A + ++++ + Sbjct: 142 L--PSMLMSAESDLCTYDFLRPMTEGGIGKPLHITGGLPDYGAFMECIGILDQLCGKKNY 199 Query: 179 GKQI-IREILYYVL-TGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236 Q+ ++ L++ L A + + R+L+ +E Y E ++VE A Sbjct: 200 AYQMGVKGTLFWFLGLIAGIWGPEAAGQPRKSRERMKRLLEYMEEHYGEKITVEDGAELC 259 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 S S F FK +QYL +RL KA M++ +A A R G+++ S F+R Sbjct: 260 FYSNSHFMKYFKQYMGVPFIQYLNEFRLEKAAGMLLTTPDPVTAVAQRCGFDNISYFNRL 319 Query: 297 FKRYFGVTPGEDAAR 311 F+R +G TPGE Sbjct: 320 FRRKYGKTPGEYRKN 334 >UniRef50_A4BBA6 Transcriptional regulator, AraC family protein n=2 Tax=Proteobacteria RepID=A4BBA6_9GAMM Length = 283 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 7/252 (2%) Query: 66 YEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATS--EVPLAGLRLNVD 123 YE + + GH+ Y+ + + Y ++ +L+ P + + P L + Sbjct: 37 YELTLTLNSQGHR--YVGDSIAPYQDDDLVLVGPNTPHTWHSDSAPTSSKPHTALVVWFS 94 Query: 124 ILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQII 183 L++L+ E + Q + + ++ L +++E + R+L Sbjct: 95 EAWLRQLVTLCPEWSNLQHLIDRARGALRFSNQTGAAIRSDLQELIEAEPERRLLT---F 151 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 +IL + T L + V+ R+ +Y + +LAA ++SVS+F Sbjct: 152 VQILQMLNTDTEAQPLCRHFLHTPPDDRLQPVIDRLNREYANPPTAAELAAMTHLSVSSF 211 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 F+ T SP QY+ R+ +A +I + + A +VGY+S +QF++ FK G+ Sbjct: 212 QRQFQRHTRLSPSQYIARLRIGQACSQLISSQTQIAIIAQQVGYQSLAQFNKTFKSLKGL 271 Query: 304 TPGEDAARMRAM 315 TP + A+ RA Sbjct: 272 TPRQFRAQFRAH 283 >UniRef50_B2IHG7 Transcriptional regulator, AraC family n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IHG7_BEII9 Length = 303 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 13/256 (5%) Query: 67 EPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAG--LRLNVDI 124 E I ++ I + + + + ++ LP + T + + G + + D Sbjct: 41 ECEIHLIRESSGIELVGDHIGEFAPGRLTIVGGDLPHDWVTSLSPGETVRGRDIVVQFDA 100 Query: 125 LQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIR 184 + + + E +P +A + E ++L+ M + L Sbjct: 101 GRWCQAAAILPELAMLEPFLARASRGLGFHGET-REKGAQILESMGQARGLDRLCLLFRL 159 Query: 185 EIL------YYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANM 238 L Y +L+ T + +V+ + + +T ++ + LA M Sbjct: 160 LALLAGSHEYEILSSEDFMPNRDPAMVDT----VQQVMSYLFDHFTSDIRLTDLANMVGM 215 Query: 239 SVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFK 298 S SAF F+ + S ++ RL +A ++ M + VGY + S F+R F+ Sbjct: 216 SESAFSRFFQKNSGNSFTDHVMKLRLGRACKLLADSDMPITDICFEVGYANISNFNRNFR 275 Query: 299 RYFGVTPGEDAARMRA 314 + G+TP R Sbjct: 276 QQRGLTPSLYRRWARQ 291 >UniRef50_C9LA22 Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=C9LA22_RUMHA Length = 277 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 13/252 (5%) Query: 63 PVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNV 122 Y + + G I + N+ +L+ +P + E P + L + Sbjct: 37 HSHYFSELFFVTKGTGYFQIEGKQIPVQKNDLILINPNIPHTE--FGNKEQPWEYIALGI 94 Query: 123 DILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLD-ARILGKQ 181 + +Q Q + EI L+ ++ + + + + Sbjct: 95 EGVQFQYSEKEAPYSYSVFSLSREHR--------EIPWYLSTLVKEIQTQQEGYQTICQN 146 Query: 182 IIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVS 241 ++ IL V L A + T + V + I Y E+++++ L+A +++ Sbjct: 147 LLELILLSVARSTRQEFLSAPRQKTTRECRL--VEQYINEHYHEDITLDTLSALVHINKY 204 Query: 242 AFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYF 301 H FK+ SP+ YL R+ +AR ++ + G+ S S FS+ F+R Sbjct: 205 YLVHAFKNYKGVSPINYLIQRRVEEARYLLESTNYSVTKIGEISGFSSQSYFSQTFRRLT 264 Query: 302 GVTPGEDAARMR 313 G TP + + Sbjct: 265 GTTPNAYRKKKK 276 >UniRef50_C9PJ43 Transcriptional regulator AraC family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PJ43_VIBFU Length = 295 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 103/279 (36%), Gaps = 13/279 (4%) Query: 48 PDVRLLYGETPFARTPVMYEPG--IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFEC 105 RLL E + P + + + YI + + +Y+ + L+ +P Sbjct: 14 SSWRLLIRELDTIPFGWHFHPEYELTLTLNSAGERYIGDNISKYEHGDLTLVGPNIPHTW 73 Query: 106 E--TYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAE 163 + + +P L D + LL E + A + L Sbjct: 74 QSQWHLDPTLPQKVYVLWFDQAWVDNLLRSFPEFAPLDALFQQARHGVAFPTSFALSLLP 133 Query: 164 RLLDVMERPLDARILGKQIIREILYYVLTGPCGGAL------LALVSRQTHFSLISRVLK 217 + + ++ AR ++ +L + L + ++S++L+ Sbjct: 134 -MFEQLDNASPARR--STLLLSVLASLGECDTPQTLGVEGGMRLAETHGRDQRVLSQLLE 190 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 RI YTE L + +LA + MS S FK + S +Y+ R+ KA ++I Sbjct: 191 RIHAHYTEPLFLPELAQDVAMSESTLIRFFKRLMGQSVNRYITQVRIGKACSLLIRTDFP 250 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQ 316 S A + G+ + + F+R F +Y +TP + R + + Sbjct: 251 VSLVAEQAGFTNQANFNRLFLKYKQMTPRQFRQRFKQLN 289 >UniRef50_C0CW55 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW55_9CLOT Length = 286 Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 83/245 (33%), Gaps = 12/245 (4%) Query: 70 IIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQE 129 I + G + +N R + L+ +P + + A + P + + + Sbjct: 46 IHFVMEGGGVYTLNGRKHPVRKGQAFLIYPSMPIDYQ--ADAADPWEFCWVGFNGNDARL 103 Query: 130 LLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYY 189 L+ G + + + E + + I + E+L + Sbjct: 104 LMNATG-------FTPQNPVITLKDPERMEELLMNIYRCRGHHPHEFINMTAKLYELLAF 156 Query: 190 VLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKS 249 ++ + H + R I + Y + +++ +A + S + FK+ Sbjct: 157 LIQEASDPMPAQSRTGVEH---VQRACDFIASHYQDPITINDIAGHVGICRSRLYRVFKA 213 Query: 250 VTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 S SPLQYL +RL +A ++ A G+ FS FK+ G +P E Sbjct: 214 HLSISPLQYLTEFRLREACNLMNRQKATVKEVAYAAGFSDPLYFSTVFKKSLGQSPKEYM 273 Query: 310 ARMRA 314 + Sbjct: 274 KSSKG 278 >UniRef50_B0C7G2 Transcriptional regulator, AraC family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7G2_ACAM1 Length = 311 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 48/271 (17%), Positives = 98/271 (36%), Gaps = 21/271 (7%) Query: 53 LYGETPFARTPVMYEPGIII-----LFSGHKIGYINERVFR--YDANEYLLLTVPLPFEC 105 + +I+ +F + E F+ Y E +++ P +C Sbjct: 52 HHQPAHTTPVHKFTHHVLILSPLDNVF--EVEYQLGELSFQGPYGHGELMIIPAHTPQQC 109 Query: 106 ETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERL 165 + + ++ L L+++ + D+ + F+ N A I L Sbjct: 110 QWH----QAVSFLSLSLEPQFFETAAYDLTQVNRFELLP-----NIAVQDRLIYDIGTAL 160 Query: 166 LDVMER-PLDARILGKQIIREILYYVLTGPCGG--ALLALVSRQTHFSLISRVLKRIENK 222 + + ++ + +++ C L + +L++R L+ I + Sbjct: 161 RQELNTLEFTDHLYIDSLVTALSIHLMKRYCTQVPRLKDSSDQGLPPALLNRALEYINDH 220 Query: 223 YTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAA 282 +NL + LA E MS F FK +P QY R+ KA+ ++ + A Sbjct: 221 LDQNLKLVDLAQEVGMSRYYFSRLFKKSMGVAPHQYAIKQRIKKAKGLLRQTNTPIAMIA 280 Query: 283 MRVGYESASQFSREFKRYFGVTPGEDAARMR 313 + G+ + S S+ F++ GVTP + R Sbjct: 281 RQCGFTNPSHLSKYFRQLTGVTPKAFRDQYR 311 >UniRef50_UPI00017450D3 transcriptional regulator, AraC family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017450D3 Length = 285 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 46/247 (18%), Positives = 85/247 (34%), Gaps = 14/247 (5%) Query: 69 GIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQ 128 ++ G + RV R A ++ P + A P + ++ L Sbjct: 46 ELVYCLRGSGTVRVAGRVHRVKARGLYWVSCWHP--HQYQADPIQPWELYWVRIEGPGLD 103 Query: 129 ELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILY 188 L + + + + +++E P + + Sbjct: 104 ALASLL--------RIRETPVFPLLDDAATKACFMDAFNILESPSPN---APASMHVAVA 152 Query: 189 YVLTGPCGGALLALVSRQTH-FSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNF 247 +L+ S + R L R+ Y + L + LA A MSVS F F Sbjct: 153 RLLSLLYENRFKDGGQDTEPVPSTLERPLIRMRQHYADALRLSDLAHLAGMSVSHFIRTF 212 Query: 248 KSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 K TSP+ +L+ R+++A+ +I A + GY FS++FK+ G+ P + Sbjct: 213 KRTMGTSPIDWLRRERMNQAKHRLIDTDEPIKEIARQCGYRDPYFFSKDFKKLTGLPPTD 272 Query: 308 DAARMRA 314 + R Sbjct: 273 YRVQERG 279 >UniRef50_C5EK80 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=C5EK80_9FIRM Length = 291 Score = 177 bits (450), Expect = 3e-43, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 96/270 (35%), Gaps = 20/270 (7%) Query: 53 LYGETPFARTPVMYEPGIIILFSGHKIGYINER-----VFRYDANEYLLLTVPLPFECET 107 L+ P+AR + + SG + + + E L+ Sbjct: 30 LHSYGPYARNHYL----FHYVISGAGTLMSTDSKGMTNTYHIKSGEGFLIHPKQ--VNTY 83 Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 A + P L D L+++E L G + + + + L +L Sbjct: 84 SADRDHPWEYTWLEFDGLRVKEALELAG-------LTMDNPVYHSNARDLSLELKNEMLY 136 Query: 168 VMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENL 227 + + + L Y+ + + + I IE + ++ Sbjct: 137 IANHSDQSPFHLIGHLYLFLDYL--TRSSSSRRMMRGGKLQDFYIREATSFIEQNFQNDI 194 Query: 228 SVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGY 287 SVE +AA N++ S F F+ SP ++L +YR+ KA ++ + VGY Sbjct: 195 SVEDIAAFCNLNRSYFGKIFRDAVGKSPQEFLISYRMTKAAELLKLTELTIKDIGNAVGY 254 Query: 288 ESASQFSREFKRYFGVTPGEDAARMRAMQG 317 S FSR FK+ +G++P E + + G Sbjct: 255 PSQLHFSRAFKKTYGISPREWRSENKIASG 284 >UniRef50_C7PHM8 Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PHM8_CHIPD Length = 286 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 52/279 (18%), Positives = 101/279 (36%), Gaps = 3/279 (1%) Query: 33 VNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEP-GIIILFSGHKIGYINERVFRYDA 91 ++ + G + +R TP R +M + I L G K + Sbjct: 6 LDPHTSFGKQDEGDISILR-YRTSTPAPRAKIMLQQNLITFLLEGEKTVHFAGAQVTLKP 64 Query: 92 NEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDI-GEDEHFQPSMAASGIN 150 +++++L E A + + D L + Sbjct: 65 HQFVMLAAGNCLMSEKAAAVNADYHSILILFDNKLLADFFNRHRALLSQQTKVADQPPFL 124 Query: 151 SATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFS 210 +L L ++ +++ E L+ L G + + + + Sbjct: 125 LFEKDTFLLNFIHSLDCMLNDGQPIYHALQKVKLEELFLYLAVHYPGQIQQIRNMSADAN 184 Query: 211 LISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMM 270 + + + + N++VE+LA NMS+S+F F + +P ++L R+ KA M Sbjct: 185 EDLVIRQAVTSHMDSNITVEELAFLCNMSLSSFKRRFARIYDNTPNRWLLEKRMEKAAKM 244 Query: 271 IIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDA 309 + D +KAS +GYE+ S F + FK+ +G TP + Sbjct: 245 LKQDKLKASEIFYELGYENLSSFIQSFKQIYGKTPKQYQ 283 >UniRef50_A6W0F8 Helix-turn-helix-domain containing protein AraC type n=1 Tax=Marinomonas sp. MWYL1 RepID=A6W0F8_MARMS Length = 307 Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 110/281 (39%), Gaps = 9/281 (3%) Query: 35 KLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGI-IILFSGHKIGYINER-VFRYDAN 92 +L +G ++ + + + + + + +G K+ + E + + Sbjct: 20 QLVENRVCFAGPHSELSIYDTYEQAQKVSLKADSLLYCGMVTGAKVMHTKEHDNIPFLPH 79 Query: 93 EYLLLTVPLPFECET-YATSEVPLAGLRLNVDILQLQELLMDIG----EDEHFQPSMAAS 147 E +L + A P L + + ++ ++ + E ++ + Sbjct: 80 ESFILAPKEEVFIDFPEAQFHRPTTCLTIAISQERVAQICDRMNDIMVESFPSGVALDPN 139 Query: 148 GINSATLSEEILCAAERLL-DVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQ 206 ++ +RL D + D +L + E++ ++ ALL Sbjct: 140 QHLHTLHTQATQQVIDRLTSDFLRNDPDRDLLVDFGVSELVTRIIRHHGRDALLRFTQHS 199 Query: 207 THFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHK 266 + ++ V++ IE + L + QLA A MS S F+ +FK +PL+Y R+ + Sbjct: 200 PDANGLTCVIQWIEQNLAQPLDINQLAKMACMSRSRFYESFKRQLGCTPLEYQHQRRMSR 259 Query: 267 ARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGE 307 A + + + + +GY S S FSR F ++FG++P + Sbjct: 260 AYQRL-QEKCSVTEVSYELGYLSLSHFSRRFHQHFGMSPRQ 299 >UniRef50_B9DS09 AraC family regulatory protein n=18 Tax=Streptococcus RepID=B9DS09_STRU0 Length = 307 Score = 176 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 6/261 (2%) Query: 57 TPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLA 116 P E + + G +I+ F A + +L+ A + Sbjct: 32 RPDILFHWHPELEVTYVCEGTARYHIDYDFFNSQAGDIILIRPNGMHSIHPIAKEKHITD 91 Query: 117 GLRLNVDI---LQLQEL-LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERP 172 + ++D+ + ++ L + ++ ++I + + + Sbjct: 92 NFQFHLDMLGLSVVDQVSLHYLQPLQNSVNKFVHCIKPHMPGYDDIKACLFDIFSLAKEE 151 Query: 173 -LDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQ 231 IL K + E +Y + I +++ I N Y++NL+++ Sbjct: 152 SRHFEILLKSKLHEFIYLLYFHRYVVK-KNTDDTYRKNEKIRQLIDYINNHYSDNLTIDF 210 Query: 232 LAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESAS 291 L+ S + F FK T TS +++ RL KA ++IH A +G+ + S Sbjct: 211 LSQFIGYSKTHFMTVFKQHTGTSCTEFVIQVRLSKACELLIHSTRPILEIANEIGFNNLS 270 Query: 292 QFSREFKRYFGVTPGEDAARM 312 F+R+FKRY+ +TP + + Sbjct: 271 NFNRQFKRYYNLTPSQYRKKY 291 >UniRef50_Q13QC7 Transcriptional regulator, AraC family n=5 Tax=Burkholderia RepID=Q13QC7_BURXL Length = 307 Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 57/272 (20%), Positives = 104/272 (38%), Gaps = 16/272 (5%) Query: 52 LLYGETPFARTPVMYEPGIIILFSGHKIGY--INE--RVFRYDANEYLLLTVPLPFECET 107 L E P + E ++ L SG + +N + + P Sbjct: 39 LEPVEQELLEAPGLQELTLMTLASGAEHLERNLNGRWESADLRVGDVWFVPP-APISWRW 97 Query: 108 YATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLD 167 + S+ PL+ + L+++ + + + + + + L +L A R Sbjct: 98 RSISDEPLSTVHLHIERSLIDSVAEQMELGGSRELVLGDAMQFRDPLVAAMLAALHR--- 154 Query: 168 VMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHF--------SLISRVLKRI 219 P D+R+ ++ + ++L G A S I RV I Sbjct: 155 AAADPADSRLFVDALVHALAAHLLQHYSRGRSAAAGSPAGLPACPERFVPRRIRRVTDYI 214 Query: 220 ENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKAS 279 +L++ +LAA+A +S F F+ T +P +++ RL +A ++ Sbjct: 215 RANLAGDLAISELAAQAGLSSFHFARVFRRETRETPHRFVTRLRLEEAARLLHATDQTVL 274 Query: 280 AAAMRVGYESASQFSREFKRYFGVTPGEDAAR 311 A+ VG+E+AS FS +FKR +GVTP R Sbjct: 275 QIALAVGFENASHFSVQFKRDYGVTPLAYRLR 306 >UniRef50_D1N277 Transcriptional regulator, AraC family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N277_9BACT Length = 315 Score = 176 bits (447), Expect = 9e-43, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 101/286 (35%), Gaps = 18/286 (6%) Query: 41 NSLSGLLPDVRLL-----YGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYL 95 + L V + YE + ++ G + + Sbjct: 25 GYHATALKSVHFMNDWEKELSHTQYHKHNFYE--LAVVLRGAGTHLTDSQKLPLRPGSVF 82 Query: 96 LLTVPLPFECETYATSEVPLAGLRLNVDILQLQ----ELLMDIGEDEHFQPSMAASGINS 151 LL P E Y SE PL + D L+ L G F P+ + Sbjct: 83 LL---HPGESHAYEYSE-PLTLMNFMFDSQILRPYRKSLSGLAGYPLLFCPAEERRELCV 138 Query: 152 ATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSL 211 + + L LL M R G +++ L + V R+ S Sbjct: 139 DSATLAELDI---LLHAMAMESRQRSAGAELLLISHLLNLLVLVLRKSCSYVERERFNSD 195 Query: 212 ISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMI 271 I + + Y E +S+ +LA AN+S S+F F+ TSP+Q+L N R+ KA + Sbjct: 196 IGIAVAFMRRNYQEEISLPKLARLANLSESSFFRKFREEMKTSPMQWLLNLRIRKAMEFL 255 Query: 272 IHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQG 317 I M A G+ + FSR+F+R GV+P ++ + Sbjct: 256 IRSDMNIGEIAAATGFSDSLYFSRQFRRQVGVSPKNYRSQAHGPRQ 301 >UniRef50_Q2S2I5 Transcriptional regulator, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S2I5_SALRD Length = 261 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 11/246 (4%) Query: 73 LFSGHKIGYINERV-FRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELL 131 L G + +A E L++ + A E P + L +D Q++ +L Sbjct: 13 LVDGTARVDVEGEEGLAVEAGESLVVPPLQTITVDFPAAHEDPARYVVLRIDRSQVRSIL 72 Query: 132 MDIGEDEHFQPSMAASGINSATLSE--------EILCAAERLLDVMERPLDARILGKQII 183 + D P++ G + +L L E P + L Sbjct: 73 DRVASDVPSGPAVQDGGRDDPAYFHVPENEGIARVLNMVAYLFR--EDPPNRDRLIDLNA 130 Query: 184 REILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF 243 E+L +L L+ + R T ++ ++ I++ ++S+++L EA MS S+F Sbjct: 131 MELLIQMLQTASRPLLVGELPRNTSAGGLAAAVQYIQDNLDRHISIDELVEEACMSKSSF 190 Query: 244 HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGV 303 + +F SPL+Y+ R+ +AR ++ + + +G+ S S F FK + GV Sbjct: 191 YRHFSDEFEMSPLEYITRERVVRARELLADSDNTVTNVSHALGFSSTSHFIDMFKEHEGV 250 Query: 304 TPGEDA 309 TP + Sbjct: 251 TPKQYQ 256 >UniRef50_Q4ZTP2 Helix-turn-helix, AraC type n=23 Tax=Bacteria RepID=Q4ZTP2_PSEU2 Length = 307 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 95/273 (34%), Gaps = 14/273 (5%) Query: 49 DVRLLYGET----PFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFE 104 + ++Y E P R E + ++ + ++ + + ++ L LP Sbjct: 26 GLSIIYREHGFPCPLVRWHFHKEYELHLIVASSGKVFVGDYIGNFNPASLFLTGPNLPHN 85 Query: 105 CETYATSEV--PLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAA 162 + P + +N L+ E + P + + + Sbjct: 86 WISQIDDGEVVPKRDMLVNFTDELLESGNQVFAELKTLTPLLERARYGIEFRCKR---TI 142 Query: 163 ERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVS-----RQTHFSLISRVLK 217 + + M++ D+R + + IL +L LL+ + + +R + Sbjct: 143 RQAMKQMQKIADSRGITRLGHFFILLELLAASDDYQLLSGTAVAHTADEHSVDRTNRAVD 202 Query: 218 RIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMK 277 I Y L +E++A M + F FK T ++++ R+ K+ ++ Sbjct: 203 YIFAHYGRELPLEEVAEYLGMKPTYFSRVFKQATGRCFVEFVNRLRISKSCELLADGDKP 262 Query: 278 ASAAAMRVGYESASQFSREFKRYFGVTPGEDAA 310 + G+ + S F+R F++ G+TP Sbjct: 263 VTDVCFESGFNNISNFNRRFQQLKGMTPSHYRR 295 >UniRef50_C6IZN9 AraC family transcriptional regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IZN9_9BACL Length = 301 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 95/268 (35%), Gaps = 13/268 (4%) Query: 57 TPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLL-TVPLPFECETYATSEVPL 115 E G + ++ F A E + + + A + Sbjct: 33 EHVIDCHWHDEAEFFYCLEGETLFQVDTDYFPVGAGEAVFIDGGDIHAAH---AHGDQGC 89 Query: 116 AGLRLNVDILQLQEL---LMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVME-- 170 A L D L + Q A + + L E ++ +M Sbjct: 90 AFFSLVFDTQLLASAHYDAVQENLVLPLQERKATFPRHIRRETAADLSLLEHIVALMRSC 149 Query: 171 --RPLDARILGKQIIREILYYVLTG--PCGGALLALVSRQTHFSLISRVLKRIENKYTEN 226 K + +L + + + S + + V++ I++ Y+ Sbjct: 150 STESPGYEGAVKGHLFLMLAEIAATGRAVNRSHSSSRSESSKIDRLKTVIQHIQHNYSHP 209 Query: 227 LSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVG 286 + + +LAA MS F FKS+T +P+ Y+ +YR+ +A ++ K S A+ VG Sbjct: 210 IRLAELAALIPMSEGQFCRFFKSMTRQTPMDYINSYRIRQAAELLREPERKISDIALEVG 269 Query: 287 YESASQFSREFKRYFGVTPGEDAARMRA 314 +++ S F R F++ +P E R++A Sbjct: 270 FDNISYFIRVFRKAMNCSPSEFRKRLQA 297 >UniRef50_C3R936 Transcriptional regulator n=2 Tax=Bacteroidales RepID=C3R936_9BACE Length = 286 Score = 175 bits (445), Expect = 1e-42, Method: Composition-based stats. Identities = 38/257 (14%), Positives = 90/257 (35%), Gaps = 6/257 (2%) Query: 60 ARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATS---EVPLA 116 A+ + + G + + + A + +L+ + E A S E + Sbjct: 31 AKLHQHDAWELYYVVHGQGNRMAGDTLQPFTAGDVVLIPPSMIHRWEYNADSTDEEGHVR 90 Query: 117 GLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDAR 176 L + L+ +++ + + S ++ E R+L + + Sbjct: 91 YLMVAFSHSLLER-CIEVFPELRNRLSGVQFPTDALKFGLESSRIIRRILSEINEMDELE 149 Query: 177 ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236 L +L + T + + + ++ + Y +++++ +A E Sbjct: 150 RLSAMFR--LLPVIFTSSDYTLAGKPMRIERDVRRMQQICAYVMKHYVHSIALDDIAEEV 207 Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296 M+ SAF FK + Q++ YRL+ A ++ + + VG+ F R Sbjct: 208 GMNRSAFCSYFKRCKGMTFSQFVTQYRLNTACHLLKNTQRGVAEICYMVGFNDLPHFVRV 267 Query: 297 FKRYFGVTPGEDAARMR 313 F G++P + + + Sbjct: 268 FTNTMGMSPTKYRKQYK 284 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.309 0.155 0.428 Lambda K H 0.267 0.0477 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,080,449,183 Number of Sequences: 3077464 Number of extensions: 107829154 Number of successful extensions: 346169 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19624 Number of HSP's successfully gapped in prelim test: 1938 Number of HSP's that attempted gapping in prelim test: 291187 Number of HSP's gapped (non-prelim): 30980 length of query: 318 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 190 effective length of database: 646,480,964 effective search space: 122831383160 effective search space used: 122831383160 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 93 (40.2 bits)