Phyre 2 alignment of P75715 with d1dm9a_

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Job Description | P75715
Confidence | 1.44% | Date | Thu Jan 5 12:13:24 GMT 2012
Rank | 58 | Aligned Residues | 26
% Identity | 8% | Template | d1dm9a_
SCOP info | Alpha-L RNA-binding motif | Alpha-L RNA-binding motif | Heat shock protein 15 kD
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | S | F | G | G | R | V | E | V | P | Q | N | C | E | L | N | A | G | Q | I | V | E | F | D | F | G | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | H | Y | N | G | Q | R | S | . | K | P | S | K | I | V | E | L | N | A | T | L | T | L | R | Q | G | N
Template Known Secondary structure |  |  |  |  | T | T |  |  |  | . |  | T | T |  | B |  |  | T | T |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 36 | . | . | . | 40 | . | . | . |  | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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