BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (145 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C8QE75 Putative uncharacterized protein n=1 Tax=Pantoea... 168 6e-41 UniRef50_C2LLG0 Plasmid-related protein n=2 Tax=Proteus mirabili... 107 8e-23 UniRef50_A8GJ61 Putative uncharacterized protein n=3 Tax=Serrati... 89 6e-17 UniRef50_A7M7F9 Sea38 n=1 Tax=Serratia entomophila RepID=A7M7F9_... 78 7e-14 UniRef50_Q7N7T0 Similar to unknown protein n=2 Tax=Photorhabdus ... 78 9e-14 UniRef50_B6VNI3 Putative uncharacterized protein n=1 Tax=Photorh... 76 3e-13 UniRef50_B7MZL7 Putative uncharacterized protein n=3 Tax=Enterob... 70 2e-11 UniRef50_D0FNQ8 Conserved uncharacterized protein n=6 Tax=Entero... 62 4e-09 UniRef50_A7ZRE1 Transposition helper protein, IS21 family n=2 Ta... 48 1e-04 UniRef50_B7J9D2 Putative uncharacterized protein n=1 Tax=Acidith... 38 0.082 >UniRef50_C8QE75 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QE75_9ENTR Length = 319 Score = 168 bits (425), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 79/145 (54%), Positives = 99/145 (68%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 P DLL VL RLDVE+NGFNG +L GVPS Y WYT YG K P GY++NI + G++++ Sbjct: 175 QPLDLLMVLPPRLDVEINGFNGRLLAGVPSGYDWYTHHYGTKWPRGYDLNICNGGEDWLA 234 Query: 61 VDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWSS 120 VDFDTPW P ++A LS R+ T+EHWYAE+GC++CG+ Y GE + LEWS Sbjct: 235 VDFDTPWSPPSESLLAALSGRYGVTVEHWYAERGCDYCGYALYSDGEQAEACCDSLEWSE 294 Query: 121 PTDDDELPEVTAPEWIVDKVAHYGG 145 D+D EVT P WIVD VAH+GG Sbjct: 295 EEDEDGFREVTGPAWIVDNVAHFGG 319 >UniRef50_C2LLG0 Plasmid-related protein n=2 Tax=Proteus mirabilis RepID=C2LLG0_PROMI Length = 333 Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 18/162 (11%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVP----------------SAYHWYTEQYGVKGP 44 +P D+ T+L T L E++GFNG L P S YH Y +YGVK P Sbjct: 173 IPMDMRTLLPTSLAAELHGFNG-CLWKTPEVIWRQARWQAFAPGNSTYHLYQCRYGVKWP 231 Query: 45 CGYEVNISSQG-DNFIQVDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRY 103 G + G + +FDTPW P + V+ LS RF C + H YAE+GC FCG+ Y Sbjct: 232 NGSGFHCIDGGYATELSAEFDTPWGPPSAAVLCALSARFRCQVRHVYAEEGCGFCGYSEY 291 Query: 104 ERGELVDVLWGELEWSSPTDDDELPEVTAPEWIVDKVAHYGG 145 + G L D E+E+S ++D +VT P++I+D + HYGG Sbjct: 292 DHGRLTDHESDEIEFSDEENEDGFQDVTGPDYILDSLPHYGG 333 >UniRef50_A8GJ61 Putative uncharacterized protein n=3 Tax=Serratia proteamaculans 568 RepID=A8GJ61_SERP5 Length = 313 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 8/134 (5%) Query: 2 PFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQV 61 P D+L ++ TRL E+NG +G +L VP+ Y QYGV+ P G+ G N + V Sbjct: 173 PCDMLMLIPTRLATELNG-SGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTV 231 Query: 62 DFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVD-------VLWG 114 FD+PW P +VI +S RFSC +EH + G+ RY+RGE VD V G Sbjct: 232 HFDSPWYPPAGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAG 291 Query: 115 ELEWSSPTDDDELP 128 E+ + D D +P Sbjct: 292 EVIHLTYADKDSVP 305 >UniRef50_A7M7F9 Sea38 n=1 Tax=Serratia entomophila RepID=A7M7F9_9ENTR Length = 135 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 52/87 (59%) Query: 59 IQVDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEW 118 +Q+DFDT W PE I LS++FSC + H ++E G FCG+ Y GE +D +LEW Sbjct: 49 VQIDFDTRWAPPECVDIRALSQQFSCHVIHTFSEAGEGFCGYHVYACGEYIDSASDDLEW 108 Query: 119 SSPTDDDELPEVTAPEWIVDKVAHYGG 145 S D+D V PE+++ V +YGG Sbjct: 109 SEELDEDGYAMVVGPEYVLGNVPNYGG 135 >UniRef50_Q7N7T0 Similar to unknown protein n=2 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N7T0_PHOLL Length = 307 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 3/145 (2%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 +P DL ++ TRL E+NGF GG+L + + Y YG+ P GY++ D + Sbjct: 165 VPCDLFLLIPTRLASEINGFYGGLLKDHETTHELYFRLYGMTRPRGYDIAWKHHDDGSLT 224 Query: 61 VDFDTPWCQP-ESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWS 119 FD +P +I LSR++ C + H++ E C CG+ +Y G+ + ELE+ Sbjct: 225 GHFDKTLREPWYEKIIVPLSRQYHCRITHYFKEV-CGCCGYDKYLNGQWEAGIIDELEFG 283 Query: 120 SPTDDDELPEVTAPEWIVDKVAHYG 144 D+D +V P++I+ ++H G Sbjct: 284 E-EDEDGTRKVVGPDYILGNISHDG 307 >UniRef50_B6VNI3 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=B6VNI3_PHOAA Length = 346 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 5/145 (3%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 +P DL ++ T L E+NGF GG+L G + + Y Y + P GYE+ D + Sbjct: 205 VPCDLFLLIPTHLASEINGFCGGLLRGYETTHELYFRLYDMVRPRGYEIAWKHNDDGSLT 264 Query: 61 VDFD-TPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWS 119 FD PW ++ LS+++ C + H++ E C FCG+ +Y G+ + ELE+ Sbjct: 265 GSFDAAPWEPWYEKIMVPLSKQYHCHITHYF-EDVCGFCGYDKYRNGQWEEGSVDELEFG 323 Query: 120 SPTDDDELPEVTAPEWIVDKVAHYG 144 ++D + +V P +I+ ++H G Sbjct: 324 ---EEDGIRKVIGPAYILGNISHDG 345 >UniRef50_B7MZL7 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B7MZL7_ECO81 Length = 326 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Query: 2 PFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQV 61 P D+L V+ RL E+NG +GG+L G+ + Y+ YGV+ P G+ V + + + Sbjct: 177 PCDMLMVIPPRLATELNG-SGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLVL 235 Query: 62 DFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVD 110 DTPW P +++ +S+ F C + HWY+E G+ Y+ GE D Sbjct: 236 LTDTPWYPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTD 284 >UniRef50_D0FNQ8 Conserved uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=D0FNQ8_ERWPY Length = 313 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Query: 2 PFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQV 61 P D+L V+ +RL E+NG G+ +G+ + Y + +G++ P G++ S + + + + Sbjct: 166 PCDMLMVMPSRLATELNG-TSGLFSGLNTTSELYMQLFGMEFPAGHQARWSREDISSLAL 224 Query: 62 DFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVD 110 +P P +V+ +S F C + H++ Q G+ ++RG+ VD Sbjct: 225 TLSSPGYPPSGEVMGQMSSLFDCEIRHYWISQDTGLSGYNCFDRGDHVD 273 >UniRef50_A7ZRE1 Transposition helper protein, IS21 family n=2 Tax=Escherichia coli RepID=A7ZRE1_ECO24 Length = 275 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 38/76 (50%) Query: 35 YTEQYGVKGPCGYEVNISSQGDNFIQVDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQG 94 Y YGV+ P G+ V + + + DTPW P +++ +S+ F C + HWY+E Sbjct: 158 YARVYGVEWPSGHNVRWVRDEMSSLVLLTDTPWYPPSGELVGEISKVFDCEIRHWYSEPV 217 Query: 95 CNFCGWQRYERGELVD 110 G+ Y+ GE D Sbjct: 218 RGIQGYNCYDGGEHTD 233 >UniRef50_B7J9D2 Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J9D2_ACIF2 Length = 251 Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 32 YHWYTEQYGVKGPCGYEVNISSQGDNFIQVDFDTPWCQPESDVIAVLSRRF-SCTLEHWY 90 Y W +G K Y +I+ + FI+ + T W P S+ I L+ + EH + Sbjct: 124 YGWSVNNWGTKW-NAYWGSINDPAEPFIEAAYSTAWS-PGSEAIDALAAMYPGAEFEHHF 181 Query: 91 AEQGCNFCGWQRYERGELV 109 ++G F G + Y GELV Sbjct: 182 LDEGGGFAGTREYSAGELV 200 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C8QE75 Putative uncharacterized protein n=1 Tax=Pantoea... 214 8e-55 UniRef50_B6VNI3 Putative uncharacterized protein n=1 Tax=Photorh... 207 8e-53 UniRef50_Q7N7T0 Similar to unknown protein n=2 Tax=Photorhabdus ... 205 4e-52 UniRef50_C2LLG0 Plasmid-related protein n=2 Tax=Proteus mirabili... 192 4e-48 UniRef50_A8GJ61 Putative uncharacterized protein n=3 Tax=Serrati... 180 1e-44 UniRef50_B7MZL7 Putative uncharacterized protein n=3 Tax=Enterob... 170 9e-42 UniRef50_D0FNQ8 Conserved uncharacterized protein n=6 Tax=Entero... 156 2e-37 UniRef50_A7M7F9 Sea38 n=1 Tax=Serratia entomophila RepID=A7M7F9_... 131 9e-30 UniRef50_A7ZRE1 Transposition helper protein, IS21 family n=2 Ta... 127 9e-29 Sequences not found previously or not previously below threshold: UniRef50_B4RLP6 Ydd n=12 Tax=Neisseria RepID=B4RLP6_NEIG2 41 0.008 UniRef50_Q7VMQ7 Putative uncharacterized protein n=1 Tax=Haemoph... 40 0.024 UniRef50_B0UVF8 Putative uncharacterized protein n=1 Tax=Haemoph... 40 0.025 CONVERGED! >UniRef50_C8QE75 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QE75_9ENTR Length = 319 Score = 214 bits (545), Expect = 8e-55, Method: Composition-based stats. Identities = 79/145 (54%), Positives = 99/145 (68%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 P DLL VL RLDVE+NGFNG +L GVPS Y WYT YG K P GY++NI + G++++ Sbjct: 175 QPLDLLMVLPPRLDVEINGFNGRLLAGVPSGYDWYTHHYGTKWPRGYDLNICNGGEDWLA 234 Query: 61 VDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWSS 120 VDFDTPW P ++A LS R+ T+EHWYAE+GC++CG+ Y GE + LEWS Sbjct: 235 VDFDTPWSPPSESLLAALSGRYGVTVEHWYAERGCDYCGYALYSDGEQAEACCDSLEWSE 294 Query: 121 PTDDDELPEVTAPEWIVDKVAHYGG 145 D+D EVT P WIVD VAH+GG Sbjct: 295 EEDEDGFREVTGPAWIVDNVAHFGG 319 >UniRef50_B6VNI3 Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=B6VNI3_PHOAA Length = 346 Score = 207 bits (528), Expect = 8e-53, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 5/145 (3%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 +P DL ++ T L E+NGF GG+L G + + Y Y + P GYE+ D + Sbjct: 205 VPCDLFLLIPTHLASEINGFCGGLLRGYETTHELYFRLYDMVRPRGYEIAWKHNDDGSLT 264 Query: 61 VDFD-TPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWS 119 FD PW ++ LS+++ C + H++ E C FCG+ +Y G+ + ELE+ Sbjct: 265 GSFDAAPWEPWYEKIMVPLSKQYHCHITHYF-EDVCGFCGYDKYRNGQWEEGSVDELEFG 323 Query: 120 SPTDDDELPEVTAPEWIVDKVAHYG 144 +D + +V P +I+ ++H G Sbjct: 324 E---EDGIRKVIGPAYILGNISHDG 345 >UniRef50_Q7N7T0 Similar to unknown protein n=2 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N7T0_PHOLL Length = 307 Score = 205 bits (522), Expect = 4e-52, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 3/145 (2%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 +P DL ++ TRL E+NGF GG+L + + Y YG+ P GY++ D + Sbjct: 165 VPCDLFLLIPTRLASEINGFYGGLLKDHETTHELYFRLYGMTRPRGYDIAWKHHDDGSLT 224 Query: 61 VDFDTPWC-QPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGELEWS 119 FD +I LSR++ C + H++ E C CG+ +Y G+ + ELE+ Sbjct: 225 GHFDKTLREPWYEKIIVPLSRQYHCRITHYFKE-VCGCCGYDKYLNGQWEAGIIDELEFG 283 Query: 120 SPTDDDELPEVTAPEWIVDKVAHYG 144 D+D +V P++I+ ++H G Sbjct: 284 EE-DEDGTRKVVGPDYILGNISHDG 307 >UniRef50_C2LLG0 Plasmid-related protein n=2 Tax=Proteus mirabilis RepID=C2LLG0_PROMI Length = 333 Score = 192 bits (487), Expect = 4e-48, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 86/162 (53%), Gaps = 18/162 (11%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVP----------------SAYHWYTEQYGVKGP 44 +P D+ T+L T L E++GFNG L P S YH Y +YGVK P Sbjct: 173 IPMDMRTLLPTSLAAELHGFNG-CLWKTPEVIWRQARWQAFAPGNSTYHLYQCRYGVKWP 231 Query: 45 CGYEVNISSQG-DNFIQVDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRY 103 G + G + +FDTPW P + V+ LS RF C + H YAE+GC FCG+ Y Sbjct: 232 NGSGFHCIDGGYATELSAEFDTPWGPPSAAVLCALSARFRCQVRHVYAEEGCGFCGYSEY 291 Query: 104 ERGELVDVLWGELEWSSPTDDDELPEVTAPEWIVDKVAHYGG 145 + G L D E+E+S ++D +VT P++I+D + HYGG Sbjct: 292 DHGRLTDHESDEIEFSDEENEDGFQDVTGPDYILDSLPHYGG 333 >UniRef50_A8GJ61 Putative uncharacterized protein n=3 Tax=Serratia proteamaculans 568 RepID=A8GJ61_SERP5 Length = 313 Score = 180 bits (458), Expect = 1e-44, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 2 PFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQV 61 P D+L ++ TRL E+NG +G +L VP+ Y QYGV+ P G+ G N + V Sbjct: 173 PCDMLMLIPTRLATELNG-SGALLRDVPTTADLYGRQYGVEWPSGHNAGCVRDGINTLTV 231 Query: 62 DFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDV-------LWG 114 FD+PW P +VI +S RFSC +EH + G+ RY+RGE VD G Sbjct: 232 HFDSPWYPPAGEVIGTVSERFSCQVEHTWYMPDAERSGYDRYDRGEHVDGGRIAAEVEAG 291 Query: 115 ELEWSSPTDDDELP 128 E+ + D D +P Sbjct: 292 EVIHLTYADKDSVP 305 >UniRef50_B7MZL7 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=B7MZL7_ECO81 Length = 326 Score = 170 bits (432), Expect = 9e-42, Method: Composition-based stats. Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 1/111 (0%) Query: 1 MPFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQ 60 P D+L V+ RL E+NG +GG+L G+ + Y+ YGV+ P G+ V + + Sbjct: 176 QPCDMLMVIPPRLATELNG-SGGLLQGISTTTSLYSRIYGVEWPSGHNVRWVRDEMSSLV 234 Query: 61 VDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDV 111 + DTPW P +++ +S+ F C + HWY+E G+ Y+ GE D Sbjct: 235 LLTDTPWYPPSGELVGEISKVFDCEIRHWYSEPVRGIQGYNCYDGGEHTDS 285 >UniRef50_D0FNQ8 Conserved uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=D0FNQ8_ERWPY Length = 313 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Query: 2 PFDLLTVLFTRLDVEVNGFNGGVLNGVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQV 61 P D+L V+ +RL E+NG G+ +G+ + Y + +G++ P G++ S + + + + Sbjct: 166 PCDMLMVMPSRLATELNG-TSGLFSGLNTTSELYMQLFGMEFPAGHQARWSREDISSLAL 224 Query: 62 DFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDV 111 +P P +V+ +S F C + H++ Q G+ ++RG+ VD Sbjct: 225 TLSSPGYPPSGEVMGQMSSLFDCEIRHYWISQDTGLSGYNCFDRGDHVDS 274 >UniRef50_A7M7F9 Sea38 n=1 Tax=Serratia entomophila RepID=A7M7F9_9ENTR Length = 135 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 53/90 (58%) Query: 56 DNFIQVDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQGCNFCGWQRYERGELVDVLWGE 115 + +Q+DFDT W PE I LS++FSC + H ++E G FCG+ Y GE +D + Sbjct: 46 EGTVQIDFDTRWAPPECVDIRALSQQFSCHVIHTFSEAGEGFCGYHVYACGEYIDSASDD 105 Query: 116 LEWSSPTDDDELPEVTAPEWIVDKVAHYGG 145 LEWS D+D V PE+++ V +YGG Sbjct: 106 LEWSEELDEDGYAMVVGPEYVLGNVPNYGG 135 >UniRef50_A7ZRE1 Transposition helper protein, IS21 family n=2 Tax=Escherichia coli RepID=A7ZRE1_ECO24 Length = 275 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 38/77 (49%) Query: 35 YTEQYGVKGPCGYEVNISSQGDNFIQVDFDTPWCQPESDVIAVLSRRFSCTLEHWYAEQG 94 Y YGV+ P G+ V + + + DTPW P +++ +S+ F C + HWY+E Sbjct: 158 YARVYGVEWPSGHNVRWVRDEMSSLVLLTDTPWYPPSGELVGEISKVFDCEIRHWYSEPV 217 Query: 95 CNFCGWQRYERGELVDV 111 G+ Y+ GE D Sbjct: 218 RGIQGYNCYDGGEHTDS 234 >UniRef50_B4RLP6 Ydd n=12 Tax=Neisseria RepID=B4RLP6_NEIG2 Length = 295 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Query: 27 GVPSAYHWYTEQYGVKGPCGYEVNISSQGDNFIQVDFDTPWCQPESDVIAVLSRRF-SCT 85 G P+ Y W +G K + + G++ I++ DT W PE + L++RF Sbjct: 188 GHPNWYDWRLANWGCKWDVNPDCTFVTVGESGIRISCDTAWGPPEG-IYRELAKRFPDVE 246 Query: 86 LEHWYAEQGCNFCGWQRYERGELVDVLWGE 115 E Y E+G F G G L D + Sbjct: 247 FEAKYLEEGMWFAGTYEGHEGALFDYPCTD 276 >UniRef50_Q7VMQ7 Putative uncharacterized protein n=1 Tax=Haemophilus ducreyi RepID=Q7VMQ7_HAEDU Length = 242 Score = 39.9 bits (92), Expect = 0.024, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query: 27 GVPSAYHWYTEQYGVKGPCGY-EVNISSQGDNFIQVDFDTPWCQPESDVIAVLSRRFSCT 85 G YHW + +G K + +I + ++ F+T WC PE ++ + C Sbjct: 139 GASDWYHWCIKNWGTKWNAEMLDDSILEGQKHSLECFFNTAWCPPEEWFHSLCTAFKDCE 198 Query: 86 LEHWYAEQGCNFCGW 100 L+ ++ E G F G+ Sbjct: 199 LKLYFYEPGMCFAGF 213 >UniRef50_B0UVF8 Putative uncharacterized protein n=1 Tax=Haemophilus somnus 2336 RepID=B0UVF8_HAES2 Length = 248 Score = 39.9 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 2/91 (2%) Query: 27 GVPSAYHWYTEQYGVKGP-CGYEVNISSQGDNFIQVDFDTPWCQPESDVIAVLSRRFSCT 85 G Y W EQ+G K C +S + I FDTPW P+ A+ + Sbjct: 134 GYKDWYDWSNEQWGCKWNVCSDSCQVSFNDNGSINCLFDTPWGPPDGWFQALCTAFPDIE 193 Query: 86 LEHWYAEQGCNFCG-WQRYERGELVDVLWGE 115 + E G F G + G ++ + Sbjct: 194 FILSFFEPGMWFAGKYIANLDGSYCNIYIDD 224 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.144 0.438 Lambda K H 0.267 0.0437 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 654,945,136 Number of Sequences: 3077464 Number of extensions: 26093980 Number of successful extensions: 54930 Number of sequences better than 1.0e-01: 13 Number of HSP's better than 0.1 without gapping: 19 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 54889 Number of HSP's gapped (non-prelim): 24 length of query: 145 length of database: 1,040,396,356 effective HSP length: 109 effective length of query: 36 effective length of database: 704,952,780 effective search space: 25378300080 effective search space used: 25378300080 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 87 (38.0 bits)