12/01/2012 21:45:27 : INFO  : Run start: Thu Jan 12 21:45:27 GMT 2012
12/01/2012 21:45:29 : INFO  : Initialised job
12/01/2012 21:45:30 : INFO  : Renaming log file 'phyre2_20120112_214527.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c22629b8a1e2112e/phyre_20120112_214527.log'
12/01/2012 21:45:31 : INFO  : Initialised job:
Sequence
>batch____
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQL
PDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAY
DGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESLAQQVGNQNDASTELNLSHIL
IPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELP
GIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTD
EQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRL
NKGQMSAPVHSSFGWHLIELLDTRNVDKTDAAQKDRAYRMLMNRKFSEEAASWMQEQRAS
AYVKILSN

12/01/2012 21:45:31 : INFO  : Checked sequence
12/01/2012 21:45:33 : INFO  : Finding homologues with PSI-BLAST
12/01/2012 21:45:33 : INFO  : PSI-BLAST 3 iterations
12/01/2012 21:47:52 : INFO  : PSI-BLAST 5 iterations
12/01/2012 21:50:25 : INFO  : Finished PSI-BLAST
12/01/2012 21:50:26 : INFO  : Running Buildali to generate a3m file
12/01/2012 22:10:02 : INFO  : Converting to HMM
12/01/2012 22:10:10 : INFO  : Calibrating HMM
12/01/2012 22:10:27 : INFO  : Searching HMM database
12/01/2012 22:20:45 : INFO  : Finished buildali
12/01/2012 22:20:47 : INFO  : Predicting secondary structure
12/01/2012 22:20:52 : INFO  : Predicted secondary structure (PSI-Pred)
12/01/2012 22:20:53 : INFO  : Predicting Disordered regions
12/01/2012 22:20:55 : INFO  : Predicted Disorder (Disopred)
12/01/2012 22:20:56 : INFO  : Running memsat_svm check
12/01/2012 22:23:53 : INFO  : Globular protein
12/01/2012 22:23:54 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c22629b8a1e2112e'
12/01/2012 22:23:55 : INFO  : Initialising fold library search
12/01/2012 22:23:56 : INFO  : Initialised search input
12/01/2012 22:23:58 : INFO  : Building Ensemble models
12/01/2012 22:24:00 : INFO  : Building hh.c1m5yB_.model.1.pdb
12/01/2012 22:24:08 : INFO  : Building c1m5yB_.1.pdb
12/01/2012 22:24:16 : INFO  : Building c2pv3B_.2.pdb
12/01/2012 22:24:24 : INFO  : Building c3nrkA_.3.pdb
12/01/2012 22:24:32 : INFO  : Building c3rgcB_.4.pdb
12/01/2012 22:24:40 : INFO  : Building c3rfwA_.5.pdb
12/01/2012 22:24:51 : INFO  : Building d1m5ya1.6.pdb
12/01/2012 22:25:00 : INFO  : Building c1f8aB_.7.pdb
12/01/2012 22:25:09 : INFO  : Building d1m5ya3.8.pdb
12/01/2012 22:25:18 : INFO  : Building c1yw5A_.9.pdb
12/01/2012 22:25:26 : INFO  : Building c2jzvA_.10.pdb
12/01/2012 22:25:33 : INFO  : Building d2pv2a1.11.pdb
12/01/2012 22:25:41 : INFO  : Building d1pina2.12.pdb
12/01/2012 22:25:47 : INFO  : Building d1j6ya_.13.pdb
12/01/2012 22:25:54 : INFO  : Building c3gpkA_.14.pdb
12/01/2012 22:26:03 : INFO  : Building d1jnsa_.15.pdb
12/01/2012 22:26:10 : INFO  : Building c2rqsA_.16.pdb
12/01/2012 22:26:19 : INFO  : Building d1eq3a_.17.pdb
12/01/2012 22:26:27 : INFO  : Building c2kgjA_.18.pdb
12/01/2012 22:26:34 : INFO  : Building c1zk6A_.19.pdb
12/01/2012 22:26:42 : INFO  : Building c2nsaA_.20.pdb
12/01/2012 22:27:01 : INFO  : Finished HH model building
12/01/2012 22:27:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
12/01/2012 22:27:45 : INFO  : html domain output complete ID 'c22629b8a1e2112e'
12/01/2012 22:45:13 : INFO  : Run end  : Thu Jan 12 22:45:12 GMT 2012
