52 d1clia1 Probab=98.93   E-value=4.5e-10  Score=80.74  Aligned_columns=146  Identities=17%

Q ss_pred             CCCCCHHHHHHHHHHHCC-CCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEE---EEEEEE-----CCCCCC
Q ss_conf             544520488888853004-78837993026655511234444234666565455555347---999750-----377887
Q batch____       230 GEQQPKSLFKMIKNTFET-TPDHVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAH---ILMKVE-----THNHPT  300 (1295)
Q Consensus       230 g~~~~~~l~~~i~~t~~~-~~~~~~~~~~dna~vi~~~~~~~~~~~~~~~~~~~~~~~~~---v~fK~E-----THNHPS  300 (1295)
                      +..+...+.+.|++..+. ..+.++.+.+|++++++                  ....+.   ++++.+     +|.+|.
T Consensus        11 d~d~~~~~i~~I~~~~~~~~~~~v~~giGddaavi~------------------~~~~~~d~~Lv~ttD~~~~k~~f~~~   72 (166)
T d1clia1          11 DIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCA------------------LPQKYREPVLVSGTDGVGTKLRLAMD   72 (166)
T ss_dssp             CTTHHHHHHHHTHHHHHTTCCTTEESCSSSSSCEEC------------------CCTTCSSEEEEEEEEECCTHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE------------------CCCCCCCEEEEEEECCCCCCCEECHH
T ss_conf             889999999999999863047451136787505875------------------38777871899970676545131000


Q ss_pred             CCCCCCCCCCCCCCEEECCEECCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCEE
Q ss_conf             53889883215372010301038876122310024412676765447433333444343458787664305202138200
Q batch____       301 AISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEF  380 (1295)
Q Consensus       301 aIePf~GAaTGvGGiiRDi~~~G~gArPiA~~~~~~fg~l~~~~~~~p~e~~~~~~~~~~~~~~i~~~~~~Gis~YGN~~  380 (1295)
                      .-.|+.-+-.++...++|+.+||  |+|++.++++.++.++                     ...+.+.+.|+.++-+++
T Consensus        73 ~~~~~~iG~~~v~~n~sDi~amG--a~P~~~l~~l~~p~~~---------------------~~~~~~i~~Gi~~~~~~~  129 (166)
T d1clia1          73 LKRHDTIGIDLVAMCVNDLVVQG--AEPLFFLDYYATGKLD---------------------VDTASAVISGIAEGCLQS  129 (166)
T ss_dssp             TTCCSSHHHHHHHHHHHHHGGGT--CEEEEEEEEEEESSCC---------------------HHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHC--CEEEEEEEEEECCCCC---------------------HHHHHHHHHHHHHHHHHC
T ss_conf             07877899999999877889738--9475346552268999---------------------899999999999999970


Q ss_pred             CCEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEE-EEEECHHHHC
Q ss_conf             440217524430344466665321134474489878-7410787802
Q batch____       381 GRPALNGYFRTYEEKVNSHNGEELRGYHKPIMLAGG-IGNIRADHVQ  426 (1295)
Q Consensus       381 GvPtv~G~~~~f~~~~~~~~~~~~~~y~kplv~~~~-vG~~~~~~~~  426 (1295)
                      |+|.++|.+-+.-.-+..+          .+..+++ +|.++++++.
T Consensus       130 gv~ivGGdT~~~p~~~~~~----------~~~l~~taiG~vek~~ii  166 (166)
T d1clia1         130 GCSLVGGETAEMPGMYHGE----------DYDVAGFCVGVVEKSEII  166 (166)
T ss_dssp             TCEEEEEEEEECTTTSCTT----------CEEEEEEEEEEEEGGGCC
T ss_pred             CCEEECCCCCCCCCCCCCC----------CEEEEEEEEEEEEHHHCC
T ss_conf             9859715100068843688----------479999999885052139