28 c3c9uB_ Probab=99.96   E-value=1.3e-30  Score=207.86  Aligned_columns=278  Identities=17%

Q ss_pred             CCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE---EECCCCCCCCCCCC
Q ss_conf             544520488888853004788379930266555112344442346665654555553479997---50377887538898
Q batch____       230 GEQQPKSLFKMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAHILMK---VETHNHPTAISPWP  306 (1295)
Q Consensus       230 g~~~~~~l~~~i~~t~~~~~~~~~~~~~dna~vi~~~~~~~~~~~~~~~~~~~~~~~~~v~fK---~ETHNHPSaIePf~  306 (1295)
                      ++-.+..|.+.+++.+...      .++|||++++                  ..+.+.++-.   +|++++|..-+||.
T Consensus        10 ~~lgE~~li~~l~~~l~~~------~~GdDaavi~------------------~~~~~lvvs~D~~~~~~~~~~~~~p~~   65 (312)
T c3c9uB_          10 KELGEFGLIDLIKKTLESK------VIGDDTAPVE------------------YCSKKLLLTTDVLNEGVHFLRSYIPEA   65 (312)
T ss_dssp             HHHCHHHHHHHHHHHHTCS------STTSSSEEEE------------------ETTEEEEEEEEEEEBTTTBCTTSCHHH
T ss_pred             HHCCHHHHHHHHHHHCCCC------CCCCCEEEEE------------------CCCCEEEEEEEEEECCCCCCCCCCHHH
T ss_conf             3259899999999742777------8885158996------------------289669999711222756466898899


Q ss_pred             CCCCCCCCEEECCEECCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCEECCEECC
Q ss_conf             83215372010301038876122310024412676765447433333444343458787664305202138200440217
Q batch____       307 GAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALN  386 (1295)
Q Consensus       307 GAaTGvGGiiRDi~~~G~gArPiA~~~~~~fg~l~~~~~~~p~e~~~~~~~~~~~~~~i~~~~~~Gis~YGN~~GvPtv~  386 (1295)
                      .+...+-..++|+.+||  |+|++.++++.+ +.+.+                   ...+.+.+.|++++.+++|+|.++
T Consensus        66 ~G~~av~~~vsDi~a~G--a~P~~~~~~l~~-p~~~~-------------------~~~l~~i~~Gi~~a~~~~gv~ivG  123 (312)
T c3c9uB_          66 VGWKAISVNVSDVIANG--GLPKWALISLNL-PEDLE-------------------VSYVERFYIGVKRACEFYKCEVVG  123 (312)
T ss_dssp             HHHHHHHHHHHHHHHTT--CEEEEEEEEEEE-CTTSC-------------------HHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHHHHHHHHC--CEEEEEEEEEEC-CCCCC-------------------HHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             99999998734435318--779677775422-88999-------------------999999999999999871986972


Q ss_pred             CEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHCC
Q ss_conf             52443034446666532113447448987874107878023446898789997066454475502366775245402103
Q batch____       387 GYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLD  466 (1295)
Q Consensus       387 G~~~~f~~~~~~~~~~~~~~y~kplv~~~~vG~~~~~~~~~~~~~~Gd~vv~iGg~TgRDGigGat~SS~~~~~~s~~~~  466 (1295)
                      |.+ .+...              |.+.+.++|..++ .+.+..+++||.|++    ||..|.+++.+++........+  
T Consensus       124 Gdt-~~~~~--------------~~i~v~~iG~~~~-~i~~~~ak~GD~Iil----tg~~G~~~~g~~~~~~~~~~~~--  181 (312)
T c3c9uB_         124 GNI-SKSEK--------------IGISVFLVGETER-FVGRDGARLGDSVFV----SGTLGDSRAGLELLLMEKEEYE--  181 (312)
T ss_dssp             EEE-EECSS--------------CEEEEEEEEEESS-CCCSSCCCTTCEEEE----CSCSSHHHHHHHHHHTTCSCCC--
T ss_pred             EEC-CCCCC--------------EEEEEEEEECCCC-CCCCCCCCCCCEEEE----ECCCCCCHHHHHHHHCCCCCCC--
T ss_conf             102-24687--------------3999999963554-335445789988999----8577730568999861456555--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCEEEEEHHCCCCCC--------CCC
Q ss_conf             565445883787899999999997320495789953586530001344201337826998312367789--------887
Q batch____       467 FASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELREILSDEP--------GMS  538 (1295)
Q Consensus       467 ~~aVQ~GdP~~ekkl~~vi~~~le~~~~~~i~~i~D~GAgGls~a~~Ela~~~g~G~~i~Ld~vp~r~~--------gm~  538 (1295)
                          +......++.+...-+........+.+.+++|.- ||+..++.||+..++.|++|+++++|+.+.        +++
T Consensus       182 ----~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~Dis-gGl~~~l~ela~~s~~g~~I~~~~ipi~~~~~~~~~~~~~~  256 (312)
T c3c9uB_         182 ----PFELALIQRHLRPTARIDYVKHIQKYANASMDIS-DGLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKN  256 (312)
T ss_dssp             ----HHHHHHHHHHHSCCCCGGGHHHHHHHCSEEEEES-SCHHHHHHHHHHHHTCEEEECGGGSCCCHHHHHHHHHHTCC
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCCHHHHHCCCCCEEEEEHHHCCCCHHHHHHHHHCCCC
T ss_conf             ----4888999986501448999986023132855238-87534416540035533898356488898999998873998


Q ss_pred             HHHHHHHHHCC-CEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEE
Q ss_conf             89977631013-369998621179899999970997899999816984999
Q batch____       539 PLEIWCNESQE-RYVLAVAADQLPLFDELCKRERAPYAVIGEATEELHLSL  588 (1295)
Q Consensus       539 p~Ei~~SESQE-RM~l~v~~~~~~~~~~i~~~~~~~~~vIG~vt~~~~~~~  588 (1295)
                      |+|++++.++| +|+++|+|++.+++        +++++||+||+.+.+++
T Consensus       257 ~~~~~~~gg~~~~ll~tv~~~~~~~~--------i~~~~IG~v~~~~~v~l  299 (312)
T c3c9uB_         257 PIEYALFGGEDYQLLFTHPKERWNPF--------LDMTEIGRVEEGEGVFV  299 (312)
T ss_dssp             HHHHHHHCCCCCEEEEEECTTCCCTT--------CCCEEEEEEESSSSEEE
T ss_pred             HHHHHHCCCCCEEEEEEECHHHHHCC--------CCEEEEEEEEECCCEEE
T ss_conf             78999528995489999857767316--------87899999980780899