Job Description P76510 Confidence 76.86% Date Thu Jan 5 12:23:50 GMT 2012 Rank 71 Aligned Residues 50 % Identity 14% Template c2v6xA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: stractural insight into the interaction between escrt-iii2 and vps4 Resolution 1.98 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		L	C	L	T	R	Q	A	E	E	L	E	S	R	G	.	.	.	.	.	.	.	L	Y	R	R	A	A	T	V	W	M	A	A	F	R	E	S	H	S	Q	P	E	R	N	N	F	L	A	R	R	E	R	C	L	R	K	S
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	L	V	Q	K	A	I	D	L	D	T	A	T	Q	Y	E	E	A	Y	T	A	Y	Y	N	G	L	D	Y	L	X	L	A	L	K	Y	E	K	N	P	K	S	K	D	L	I	R	A	K	F	T	E	Y	L	N	R	A
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions