Phyre 2 alignment of P37675 with c1s1iK_

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Job Description | P37675
Confidence | 4.81% | Date | Thu Jan 5 11:56:49 GMT 2012
Rank | 90 | Aligned Residues | 21
% Identity | 10% | Template | c1s1iK_
PDB info | PDB header:ribosome | Chain: K: PDB Molecule:60s ribosomal protein l12; | PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
Resolution | 11.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | P | P | I | G | N | V | L | N | V | I | S | G | V | A | K | L | K | F | D | D | A | V | R | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | A | A | L | A | P | . | . | . | . | K | I | G | P | L | G | L | S | P | K | K | V | G | E | D
Template Known Secondary structure |  | T | T | T | T |  |  | . | . | . | . |  |  | G | G | G | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 25 | . | . | . | . | 30 |  |  |  |  | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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