 |
| Job Description | P0AGL7 | | Confidence | 53.16% | Date | Thu Jan 5 11:29:27 GMT 2012 |
| Rank | 51 | Aligned Residues | 41 |
| % Identity | 15% | Template | c2e6zA_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt5; |
PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5
|
| Resolution | UNK |
|
|   |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | G | P | G | Q | A | L | Q | L | F | D | G | S | N | Q | V | F | D | A | E | I | T | S | A | S | K | K | S | V | E | V | K | V | L | E | G | Q | I | D | D | R |
| Query Conservation |   |
  |   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|
|   |
|
|
|   |   |
|
|
|   |   |
|   |
|   |
|   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |
|   |   |   |
| Template Sequence |   |
F | Q | P | G | D | N | V | E | V | C | E | G | E | L | I | N | L | Q | G | K | I | L | S | V | D | G | N | K | I | T | I | M | P | K | H | E | D | L | K | D | M |
| Template Known Secondary structure |   |
|
| T | T | S |  |  |  |  |
| S | S | T | T | T | T |
|  |  |  |  |
|
|
| B | T | T |  |  |  |  |  |  |
|
| S | S |
|
| S |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|