Phyre 2 alignment of P0AE45 with d2plia1

Return to main results | Retrieve Phyre Job Id

Job Description | P0AE45
Confidence | 99.83% | Date | Thu Jan 5 11:22:30 GMT 2012
Rank | 17 | Aligned Residues | 82
% Identity | 30% | Template | d2plia1
SCOP info | FAD-binding/transporter-associated domain-like | FAD-binding/transporter-associated domain-like | CorC/HlyC domain-like
Resolution | 1.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 343 | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | Q | I | V | A | R | D | E | N | S | W | L | I | D | G | G | T | P | I | D | D | V | M | R | V | L | D | I | D | E | F | P | Q | S | G | N | Y | E | T | I | G | G | F | M | M | F | M | L | R | K | I | P | K | R | T | D | S | V | K | F | A | G | Y | K | F | E | V | V | D | I | D | N | Y | R | I | D | Q | L | L | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | N | I | H | A | V | S | S | E | R | W | R | I | H | A | A | T | E | I | E | D | I | N | T | F | F | G | T | E | Y | . | . | S | S | E | E | A | D | T | I | G | G | L | V | I | Q | E | L | G | H | L | P | V | R | G | E | K | V | L | I | G | G | L | Q | F | T | V | A | R | A | D | N | R | R | L | H | T | L | X | A
Template Known Secondary structure |  |  | S |  |  |  |  |  | T | T |  |  |  |  |  | T | T |  | B |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  | S | S |  |  | B |  |  |  |  |  |  |  |  |  | S | S |  |  |  | T | T |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |  |  | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | .
|  | 423 | . | . | .
Predicted Secondary structure |  |  |  |  |
Query SS confidence |  |  |  |  |
Query Sequence |  | T | R | I | D
Query Conservation |  |  |  |  |
Alig confidence |  |  |  |  |
Template Conservation |  |  |  |  |
Template Sequence |  | T | R | V | K
Template Known Secondary structure |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |
Template SS confidence |  |  |  |  |
|  | 85 | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions