Email l.a.kelley@imperial.ac.uk Description P06972 Date Thu Jan 5 10:59:37 GMT 2012 Unique Job ID c10a195fbc2cd4c0

Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	K	R	I	A	L	F	P	A	L	L	L	A	L	L	V	I	V	A	T	A	L	T	W	M	N	F	S	Q	A	L	P	R	S	Q	W	A	Q	A	A	W	S	P	D	I	D	V	I	E	Q	M	I	F	H	Y	S	L	L	P
Secondary structure
SS confidence
Disorder		?	?	?	?	?																						?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		R	L	A	I	S	L	L	V	G	A	G	L	G	L	V	G	V	L	F	Q	Q	V	L	R	N	P	L	A	E	P	T	T	L	G	V	A	T	G	A	Q	L	G	I	T	V	T	T	L	W	A	I	P	G	A	M	A	S	Q	F	A
Secondary structure
SS confidence
Disorder																																																					?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		A	Q	A	G	A	C	V	V	G	L	I	V	F	G	V	A	W	G	K	R	L	S	P	V	T	L	I	L	A	G	L	V	V	S	L	Y	C	G	A	I	N	Q	L	L	V	I	F	H	H	D	Q	L	Q	S	M	F	L	W	S	T
Secondary structure
SS confidence
Disorder																	?		?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		G	T	L	T	Q	T	D	W	G	G	V	E	R	L	W	P	Q	L	L	G	G	V	M	L	T	L	L	L	L	R	P	L	T	L	M	G	L	D	D	G	V	A	R	N	L	G	L	A	L	S	L	A	R	L	A	A	L	S	L	A
Secondary structure
SS confidence
Disorder				?
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		I	V	I	S	A	L	L	V	N	A	V	G	I	I	G	F	I	G	L	F	A	P	L	L	A	K	M	L	G	A	R	R	L	L	P	R	L	M	L	A	S	L	I	G	A	L	I	L	W	L	S	D	Q	I	I	L	W	L	T	R
Secondary structure
SS confidence
Disorder																																																													?
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Sequence		V	W	M	E	V	S	T	G	S	V	T	A	L	I	G	A	P	L	L	L	W	L	L	P	R	L	R	S	I	S	A	P	D	M	K	V	N	D	R	V	A	A	E	R	Q	H	V	L	A	F	A	L	A	G	G	V	L	L	L	M
Secondary structure
SS confidence
Disorder		?																								?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence		A	V	V	V	A	L	S	F	G	R	D	A	H	G	W	T	W	A	S	G	A	L	L	E	D	L	M	P	W	R	W	P	R	I	M	A	A	L	F	A	G	V	M	L	A	V	A	G	C	I	I	Q	R	L	T	G	N	P	M	A
Secondary structure
SS confidence
Disorder						?		?	?	?	?	?	?		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Sequence		S	P	E	V	L	G	I	S	S	G	A	A	F	G	V	V	L	M	L	F	L	V	P	G	N	A	F	G	W	L	L	P	A	G	S	L	G	A	A	V	T	L	L	I	I	M	I	A	A	G	R	G	G	F	S	P	H	R	M	L
Secondary structure
SS confidence
Disorder																										?	?																							?	?	?	?		?
Disorder confidence
		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Sequence		L	A	G	M	A	L	S	T	A	F	T	M	L	L	M	M	L	Q	A	S	G	D	P	R	M	A	Q	V	L	T	W	I	S	G	S	T	Y	N	A	T	D	A	Q	V	W	R	T	G	I	V	M	V	I	L	L	A	I	T	P	L
Secondary structure
SS confidence
Disorder																					?
Disorder confidence
		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Sequence		C	R	R	W	L	T	I	L	P	L	G	G	D	T	A	R	A	V	G	M	A	L	T	P	T	R	I	A	L	L	L	L	A	A	C	L	T	A	T	A	T	M	T	I	G	P	L	S	F	V	G	L	M	A	P	H	I	A	R	M
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Sequence		M	G	F	R	R	T	M	P	H	I	V	I	S	A	L	V	G	G	L	L	L	V	F	A	D	W	C	G	R	M	V	L	F	P	F	Q	I	P	A	G	L	L	S	T	F	I	G	A	P	Y	F	I	Y	L	L	R	K	Q	S	R
Secondary structure
SS confidence
Disorder																																																											?	?	?
Disorder confidence
Sequence
Secondary structure
SS confidence
Disorder
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand