 |
| Job Description | P76224 | | Confidence | 1.56% | Date | Thu Jan 5 12:20:51 GMT 2012 |
| Rank | 71 | Aligned Residues | 27 |
| % Identity | 19% | Template | d1s7oa_ |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| YlxM/p13-like
|
| Resolution | 2.31 |
|
|   |   |
155 | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
| Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | S | E | K | W | L | L | Q | Q | V | I | V | L | D | S | L | G | Y | S | R | W | Q | C | L | N | W | L |
| Query Conservation |   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|
| Template Sequence |   |
L | Y | Y | A | D | D | Y | S | L | A | E | I | A | D | E | F | G | V | S | R | Q | A | V | Y | D | N | I |
| Template Known Secondary structure |   |
 |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|