Phyre 2 alignment of P0AEK0 with c1vytE_

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Job Description | P0AEK0
Confidence | 3.10% | Date | Thu Jan 5 11:23:32 GMT 2012
Rank | 71 | Aligned Residues | 20
% Identity | 25% | Template | c1vytE_
PDB info | PDB header:transport protein | Chain: E: PDB Molecule:voltage-dependent l-type calcium channel | PDBTitle: beta3 subunit complexed with aid
Resolution | 2.6 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | R | G | K | A | V | S | D | V | A | E | R | D | P | G | Y | L | R | W | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | K | L | R | E | K | Q | Q | L | E | E | D | L | K | G | Y | L | D | W | I
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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