Phyre 2 Results for P0AEK0

Email | l.a.kelley@imperial.ac.uk
Description | P0AEK0
Date | Thu Jan 5 11:23:32 GMT 2012
Unique Job ID | c02656c0030affd4

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d1y97a1 |
|  | 100.0 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
2 | d2qxfa1 |
|  | 100.0 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
3 | c3u6fA_ |
|  | 100.0 | 18 | PDB header:hydrolase/dna Chain: A: PDB Molecule:three prime repair exonuclease 1; PDBTitle: mouse trex1 d200n mutant
4 | c1zbhA_ |
|  | 100.0 | 17 | PDB header:hydrolase/rna Chain: A: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease
5 | c1zbuB_ |
|  | 100.0 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: crystal structure of full-length 3'-exonuclease
6 | d2guia1 |
|  | 100.0 | 30 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
7 | c2p1jB_ |
|  | 100.0 | 34 | PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima
8 | c3cm6A_ |
|  | 100.0 | 17 | PDB header:hydrolase, apoptosis Chain: A: PDB Molecule:cell death-related nuclease 4; PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er
9 | d3b6oa1 |
|  | 100.0 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
10 | d1wlja_ |
|  | 100.0 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
11 | d1j9aa_ |
|  | 100.0 | 17 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
12 | c3tr8A_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:oligoribonuclease; PDBTitle: structure of an oligoribonuclease (orn) from coxiella burnetii
13 | d1w0ha_ |
|  | 100.0 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
14 | c2xriA_ |
|  | 100.0 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:eri1 exoribonuclease 3; PDBTitle: crystal structure of human eri1 exoribonuclease 3
15 | d2f96a1 |
|  | 100.0 | 22 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
16 | d2igia1 |
|  | 100.0 | 19 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
17 | c2gbzA_ |
|  | 99.9 | 16 | PDB header:hydrolase Chain: A: PDB Molecule:oligoribonuclease; PDBTitle: the crystal structure of xc847 from xanthomonas campestris: a 3-52 oligoribonuclease of dnaq fold family with a novel opposingly-shifted3 helix
18 | c2is3B_ |
|  | 99.9 | 21 | PDB header:hydrolase Chain: B: PDB Molecule:ribonuclease t; PDBTitle: crystal structure of escherichia coli rnase t
19 | d1uoca_ |
|  | 99.4 | 9 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:CAF1-like ribonuclease
20 | d1kfsa1 |
|  | 99.1 | 19 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
21 | d2d5ra1 |
| not modelled | 99.1 | 12 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:CAF1-like ribonuclease
22 | d1x9ma1 |
| not modelled | 99.1 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
23 | c2p51A_ |
| not modelled | 99.0 | 15 | PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:spcc18.06c protein; PDBTitle: crystal structure of the s. pombe pop2p deadenylation2 subunit
24 | c2kzzA_ |
| not modelled | 99.0 | 18 | PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: klenow fragment with normal substrate and zinc only
25 | c1tk0A_ |
| not modelled | 98.8 | 20 | PDB header:transferase/electron transport/dna Chain: A: PDB Molecule:dna polymerase; PDBTitle: t7 dna polymerase ternary complex with 8 oxo guanosine and2 ddctp at the insertion site
26 | c1njzA_ |
| not modelled | 98.8 | 14 | PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase i; PDBTitle: cytosine-thymine mismatch at the polymerase active site
27 | c3d45B_ |
| not modelled | 98.6 | 23 | PDB header:hydrolase Chain: B: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of mouse parn in complex with m7gpppg
28 | d2hhva1 |
| not modelled | 98.5 | 17 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
29 | c2a1sC_ |
| not modelled | 98.5 | 23 | PDB header:hydrolase Chain: C: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of native parn nuclease domain
30 | d1d5aa1 |
| not modelled | 98.0 | 18 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
31 | d1wn7a1 |
| not modelled | 97.9 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
32 | c2gv9B_ |
| not modelled | 97.9 | 12 | PDB header:transferase Chain: B: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase
33 | d1qhta1 |
| not modelled | 97.9 | 17 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
34 | c1yt3A_ |
| not modelled | 97.7 | 22 | PDB header:hydrolase,translation Chain: A: PDB Molecule:ribonuclease d; PDBTitle: crystal structure of escherichia coli rnase d, an2 exoribonuclease involved in structured rna processing
35 | d1tgoa1 |
| not modelled | 97.7 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
36 | d1noya_ |
| not modelled | 97.6 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
37 | d1q8ia1 |
| not modelled | 97.5 | 18 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
38 | c3iayA_ |
| not modelled | 97.5 | 21 | PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase delta catalytic subunit; PDBTitle: ternary complex of dna polymerase delta
39 | d1ih7a1 |
| not modelled | 97.3 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
40 | c2e6mA_ |
| not modelled | 97.3 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:werner syndrome atp-dependent helicase homolog; PDBTitle: structure of mouse werner exonuclease domain
41 | c2dtuA_ |
| not modelled | 97.2 | 18 | PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the beta hairpin loop deletion variant2 of rb69 gp43 in complex with dna containing an abasic site3 analog
42 | c1d5aA_ |
| not modelled | 97.1 | 16 | PDB header:transferase Chain: A: PDB Molecule:protein (dna polymerase); PDBTitle: crystal structure of an archaebacterial dna polymerase2 d.tok. deposition of second native structure at 2.43 angstrom
43 | c3cymA_ |
| not modelled | 97.1 | 18 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bad_0989; PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis
44 | c2vwkA_ |
| not modelled | 97.0 | 18 | PDB header:dna replication Chain: A: PDB Molecule:dna polymerase; PDBTitle: uracil recognition in archaeal dna polymerases captured by2 x-ray crystallography. v93q polymerase variant
45 | d1yt3a3 |
| not modelled | 96.9 | 21 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
46 | c1q8iA_ |
| not modelled | 96.6 | 20 | PDB header:transferase Chain: A: PDB Molecule:dna polymerase ii; PDBTitle: crystal structure of escherichia coli dna polymerase ii
47 | d1s5ja1 |
| not modelled | 96.4 | 15 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
48 | c4ktqA_ |
| not modelled | 96.4 | 16 | PDB header:transferase/dna Chain: A: PDB Molecule:protein (large fragment of dna polymerase i); PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna
49 | d2hbka2 |
| not modelled | 94.6 | 15 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
50 | d1vk0a_ |
| not modelled | 93.0 | 17 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
51 | c1s5jA_ |
| not modelled | 92.1 | 16 | PDB header:transferase Chain: A: PDB Molecule:dna polymerase i; PDBTitle: insight in dna replication: the crystal structure of dna2 polymerase b1 from the archaeon sulfolobus solfataricus
52 | c3ikmD_ |
| not modelled | 91.9 | 18 | PDB header:transferase Chain: D: PDB Molecule:dna polymerase subunit gamma-1; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme
53 | c2hbkA_ |
| not modelled | 85.4 | 20 | PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:exosome complex exonuclease rrp6; PDBTitle: structure of the yeast nuclear exosome component, rrp6p,2 reveals an interplay between the active site and the hrdc3 domain; protein in complex with mn
54 | c3mx2A_ |
| not modelled | 68.9 | 20 | PDB header:nuclear protein Chain: A: PDB Molecule:nucleoprotein; PDBTitle: lassa fever virus nucleoprotein complexed with dttp
55 | c3q7cA_ |
| not modelled | 68.4 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:nucleoprotein; PDBTitle: exonuclease domain of lassa virus nucleoprotein bound to manganese
56 | c1cmwA_ |
| not modelled | 64.2 | 18 | PDB header:transferase Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: crystal structure of taq dna-polymerase shows a new2 orientation for the structure-specific nuclease domain
57 | c3sahA_ |
| not modelled | 49.5 | 21 | PDB header:hydrolase Chain: A: PDB Molecule:exosome component 10; PDBTitle: crystal structure of the human rrp6 catalytic domain with y436a2 mutation in the catalytic site
58 | d2py5a1 |
| not modelled | 17.8 | 19 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
59 | c1lj2B_ |
| not modelled | 9.4 | 13 | PDB header:viral protein/ translation Chain: B: PDB Molecule:nonstructural rna-binding protein 34; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization
60 | c3eukC_ |
| not modelled | 5.4 | 14 | PDB header:cell cycle Chain: C: PDB Molecule:chromosome partition protein mukb, linker; PDBTitle: crystal structure of muke-mukf(residues 292-443)-mukb(head2 domain)-atpgammas complex, asymmetric dimer
61 | c3g6iA_ |
| not modelled | 5.3 | 18 | PDB header:unknown function Chain: A: PDB Molecule:putative outer membrane protein, part of carbohydrate PDBTitle: crystal structure of an outer membrane protein, part of a putative2 carbohydrate binding complex (bt_1022) from bacteroides3 thetaiotaomicron vpi-5482 at 1.93 a resolution