18/01/2012 08:29:49 : INFO  : Run start: Wed Jan 18 08:29:47 GMT 2012
18/01/2012 08:29:59 : INFO  : Initialised job
18/01/2012 08:30:01 : INFO  : Renaming log file 'phyre2_20120118_082946.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/phyre_20120118_082946.log'
18/01/2012 08:30:03 : INFO  : Initialised job:
Sequence
>batch____
MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT
RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR
GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT

18/01/2012 08:30:05 : INFO  : Checked sequence
18/01/2012 08:30:11 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 08:30:12 : INFO  : PSI-BLAST 3 iterations
18/01/2012 08:32:16 : INFO  : PSI-BLAST 5 iterations
18/01/2012 08:34:30 : INFO  : Finished PSI-BLAST
18/01/2012 08:34:34 : INFO  : Running Buildali to generate a3m file
18/01/2012 08:46:14 : INFO  : Converting to HMM
18/01/2012 08:46:19 : INFO  : Calibrating HMM
18/01/2012 08:46:39 : INFO  : Searching HMM database
18/01/2012 08:51:51 : INFO  : Finished buildali
18/01/2012 08:51:54 : INFO  : Predicting secondary structure
18/01/2012 08:52:08 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 08:52:11 : INFO  : Predicting Disordered regions
18/01/2012 08:52:18 : INFO  : Predicted Disorder (Disopred)
18/01/2012 08:52:21 : INFO  : Running memsat_svm check
18/01/2012 08:56:12 : INFO  : Globular protein
18/01/2012 08:56:14 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c02656c0030affd4'
18/01/2012 08:56:17 : INFO  : Initialising fold library search
18/01/2012 08:56:23 : INFO  : Initialised search input
18/01/2012 08:56:27 : INFO  : Building Ensemble models
18/01/2012 08:56:34 : INFO  : Building hh.d2guia1.model.1.pdb
18/01/2012 08:57:00 : INFO  : Building hh.d1y97a1.model.2.pdb
18/01/2012 08:57:23 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/hh.d1y97a1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/d1y97a1.1.pdb
18/01/2012 08:57:30 : INFO  : Building hh.d2qxfa1.model.3.pdb
18/01/2012 08:57:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/hh.d2qxfa1.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/d2qxfa1.2.pdb
18/01/2012 08:58:00 : INFO  : Building hh.c2p1jB_.model.4.pdb
18/01/2012 08:58:23 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/hh.c2p1jB_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/c02656c0030affd4/c2p1jB_.7.pdb
18/01/2012 08:58:30 : INFO  : Building d1y97a1.1.pdb
18/01/2012 08:58:58 : INFO  : Building d2qxfa1.2.pdb
18/01/2012 08:59:24 : INFO  : Building c3u6fA_.3.pdb
18/01/2012 08:59:49 : INFO  : Building c1zbhA_.4.pdb
18/01/2012 09:00:18 : INFO  : Building c1zbuB_.5.pdb
18/01/2012 09:00:44 : INFO  : Building d2guia1.6.pdb
18/01/2012 09:01:09 : INFO  : Building c2p1jB_.7.pdb
18/01/2012 09:01:35 : INFO  : Building c3cm6A_.8.pdb
18/01/2012 09:02:01 : INFO  : Building d3b6oa1.9.pdb
18/01/2012 09:02:26 : INFO  : Building d1wlja_.10.pdb
18/01/2012 09:02:49 : INFO  : Building d1j9aa_.11.pdb
18/01/2012 09:03:13 : INFO  : Building c3tr8A_.12.pdb
18/01/2012 09:03:38 : INFO  : Building d1w0ha_.13.pdb
18/01/2012 09:04:05 : INFO  : Building c2xriA_.14.pdb
18/01/2012 09:04:31 : INFO  : Building d2f96a1.15.pdb
18/01/2012 09:04:57 : INFO  : Building d2igia1.16.pdb
18/01/2012 09:05:23 : INFO  : Building c2gbzA_.17.pdb
18/01/2012 09:05:49 : INFO  : Building c2is3B_.18.pdb
18/01/2012 09:06:14 : INFO  : Building d1uoca_.19.pdb
18/01/2012 09:06:39 : INFO  : Building d1kfsa1.20.pdb
18/01/2012 09:08:52 : INFO  : Finished HH model building
18/01/2012 09:08:55 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 09:10:18 : INFO  : html domain output complete ID 'c02656c0030affd4'
18/01/2012 10:31:14 : INFO  : Run end  : Wed Jan 18 10:31:12 GMT 2012
