Phyre 2 alignment of P0AEK0 with d1bywa_

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Job Description | P0AEK0
Confidence | 2.99% | Date | Thu Jan 5 11:23:32 GMT 2012
Rank | 72 | Aligned Residues | 26
% Identity | 15% | Template | d1bywa_
SCOP info | Profilin-like | PYP-like sensor domain (PAS domain) | Flavin-binding PAS domain
Resolution | 2.60

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | D | R | P | I | . | . | . | S | P | Q | A | M | A | I | H | R | I | T | E | A | M | V | A | D | K | P | W | I
Query Conservation |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | N | C | A | V | I | Y | C | N | D | G | F | C | E | L | C | G | Y | S | R | A | E | V | M | Q | R | P | C | T
Template Known Secondary structure |  | S | S |  | B |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T | S | B | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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