Job Description P0A7E5 Confidence 85.58% Date Thu Jan 5 11:05:30 GMT 2012 Rank 130 Aligned Residues 84 % Identity 20% Template c2qvcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding PDBTitle: crystal structure of a periplasmic sugar abc transporter2 from thermotoga maritima Resolution 2.40 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																														.	.									.	.
Query SS confidence																																														.	.									.	.
Query Sequence		V	T	I	G	M	V	G	K	Y	I	E	L	P	D	A	Y	K	S	V	I	E	A	L	K	H	G	G	L	K	N	R	V	S	V	N	I	K	L	I	D	S	Q	D	V	.	.	E	T	R	G	V	E	I	L	.	.	K	G	L	D	A	I	L	V	P	G	G	F	G	Y	R	G	V	E	G	M	I	T	T	A
Query Conservation																																														.	.									.	.
Alig confidence								.	.																																					.	.									.	.											.	.	.	.
Template Conservation								.	.																																																											.	.	.	.
Template Sequence		L	T	I	G	V	I	.	.	G	K	S	V	H	P	Y	W	S	Q	V	E	Q	G	V	K	A	A	G	K	A	L	G	V	D	T	K	F	F	V	P	Q	K	E	D	I	N	A	Q	L	Q	X	L	E	S	F	I	A	E	G	V	N	G	I	A	I	A	P	.	.	.	.	S	D	P	T	A	V	I	P	T	I
Template Known Secondary structure								.	.		S		S	S																		T									S	S																T	T		S							.	.	.	.	S	S	T	T	T	T
Template Predicted Secondary structure								.	.																																																											.	.	.	.
Template SS confidence
		32	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	A	R	E	N	N	I	P	Y	L	G	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	A	L	E	X	G	I	P	V	V	T	L	D
Template Known Secondary structure							T	T							S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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