Phyre 2 alignment of P37351 with c3dz1A_

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Job Description | P37351
Confidence | 35.77% | Date | Thu Jan 5 11:55:29 GMT 2012
Rank | 56 | Aligned Residues | 40
% Identity | 13% | Template | c3dz1A_
PDB info | PDB header:lyase | Chain: A: PDB Molecule:dihydrodipicolinate synthase; | PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution
Resolution | 1.87 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 33 | . | . | . | . | . | . |  | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |  | . | . | 70 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query Sequence |  | K | G | T | W | S | S | E | . | R | T | D | Y | P | H | Y | A | S | Q | V | A | L | A | V | A | G | G | E | V | D | G | G | I | L | I | C | G | . | T | G | V | G | I | S | I
Query Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | T | P | F | H | D | D | G | K | I | D | D | V | S | I | D | R | L | T | D | F | Y | A | E | V | G | C | . | . | E | G | V | T | V | L | G | I | L | G | E | A | P | K | L
Template Known Secondary structure |  |  |  |  | B |  | T | T | S |  | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | . | . | S |  |  |  |  | S | T | G | G | G | T | G | G | G | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |  |  | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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