17/01/2012 16:09:45 : INFO  : Run start: Tue Jan 17 16:09:43 GMT 2012
17/01/2012 16:09:52 : INFO  : Initialised job
17/01/2012 16:09:55 : INFO  : Renaming log file 'phyre2_20120117_160942.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/c008354b7a67059b/phyre_20120117_160942.log'
17/01/2012 16:09:56 : INFO  : Initialised job:
Sequence
>batch____
MKKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVD
GGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMI
VDAWLGAQYEGGRHQQRVEAITAIEQRRN

17/01/2012 16:09:58 : INFO  : Checked sequence
17/01/2012 16:10:03 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 16:10:04 : INFO  : PSI-BLAST 3 iterations
17/01/2012 16:11:18 : INFO  : PSI-BLAST 5 iterations
17/01/2012 16:12:20 : INFO  : Finished PSI-BLAST
17/01/2012 16:12:24 : INFO  : Running Buildali to generate a3m file
17/01/2012 16:18:47 : INFO  : Converting to HMM
17/01/2012 16:18:49 : INFO  : Calibrating HMM
17/01/2012 16:19:02 : INFO  : Searching HMM database
17/01/2012 16:22:01 : INFO  : Finished buildali
17/01/2012 16:22:03 : INFO  : Predicting secondary structure
17/01/2012 16:22:13 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 16:22:15 : INFO  : Predicting Disordered regions
17/01/2012 16:22:21 : INFO  : Predicted Disorder (Disopred)
17/01/2012 16:22:24 : INFO  : Running memsat_svm check
17/01/2012 16:27:16 : INFO  : Globular protein
17/01/2012 16:27:18 : INFO  : Predicted Transmembrane (memsat_svm) ID 'c008354b7a67059b'
17/01/2012 16:27:20 : INFO  : Initialising fold library search
17/01/2012 16:27:27 : INFO  : Initialised search input
17/01/2012 16:27:30 : INFO  : Building Ensemble models
17/01/2012 16:27:35 : INFO  : Building hh.d1nn4a_.model.1.pdb
17/01/2012 16:28:02 : INFO  : Building d1nn4a_.1.pdb
17/01/2012 16:28:24 : INFO  : Building c3he8A_.2.pdb
17/01/2012 16:28:46 : INFO  : Building c3m1pA_.3.pdb
17/01/2012 16:29:08 : INFO  : Building c3k7pA_.4.pdb
17/01/2012 16:29:27 : INFO  : Building d2vvpa1.5.pdb
17/01/2012 16:29:45 : INFO  : Building d1o1xa_.6.pdb
17/01/2012 16:30:04 : INFO  : Building c3qd5B_.7.pdb
17/01/2012 16:30:21 : INFO  : Building c3s5pA_.8.pdb
17/01/2012 16:30:39 : INFO  : Building c2ppwA_.9.pdb
17/01/2012 16:30:56 : INFO  : Building c3onoA_.10.pdb
17/01/2012 16:31:14 : INFO  : Building c3c5yD_.11.pdb
17/01/2012 16:31:31 : INFO  : Building c2pjkA_.12.pdb
17/01/2012 16:31:49 : INFO  : Building d1mkza_.13.pdb
17/01/2012 16:32:07 : INFO  : Building d1y5ea1.14.pdb
17/01/2012 16:32:25 : INFO  : Building d1p5dx1.15.pdb
17/01/2012 16:32:42 : INFO  : Building c3pdkB_.16.pdb
17/01/2012 16:32:58 : INFO  : Building c3i3wB_.17.pdb
17/01/2012 16:33:16 : INFO  : Building c2is8A_.18.pdb
17/01/2012 16:33:33 : INFO  : Building c1wqaB_.19.pdb
17/01/2012 16:33:52 : INFO  : Building c2f7lA_.20.pdb
17/01/2012 16:34:30 : INFO  : Finished HH model building
17/01/2012 16:34:32 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 16:35:34 : INFO  : html domain output complete ID 'c008354b7a67059b'
17/01/2012 16:51:51 : INFO  : Run end  : Tue Jan 17 16:51:50 GMT 2012
