Job Description P39371 Confidence 57.64% Date Thu Jan 5 12:00:05 GMT 2012 Rank 60 Aligned Residues 246 % Identity 12% Template c3no2A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein of unknown function (baccac_01654) from2 bacteroides caccae at 1.35 a resolution Resolution 1.35 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W	V	K	L	M
Query Conservation
Alig confidence																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	V	G	G	S	G	W	N	K	I	A	I	I	N	K	D	T	K	E	I	V	W	E	Y	.	.	P	L	E	K	G	W	E	C	N	S	V	A	A	T	K	A	G	E	I	L	F	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	S	K	G	A	K	X	I	T	R	D	G	R	E	L	W	N	I	A
Template Known Secondary structure							T	T		S							T	T	T	T							.	.				T	T										T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	B	S							T	T	S
Template Predicted Secondary structure																											.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.													.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																														.	.	.																	.	.	.	.	.	.
Query SS confidence																														.	.	.																	.	.	.	.	.	.
Query Sequence		S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	.	.	.	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	.	.	.	.	.	.	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F
Query Conservation																														.	.	.																	.	.	.	.	.	.
Alig confidence							.																							.	.	.																	.	.	.	.	.	.
Template Conservation							.
Template Sequence		A	P	A	G	C	.	E	X	Q	T	A	R	I	L	P	D	G	N	A	L	V	A	W	C	G	H	P	S	T	I	L	E	V	N	X	K	G	E	V	L	S	K	T	E	F	E	T	G	I	E	R	P	H	A	Q	F	R	Q	I	N	K	N	K	K	G	N	Y	L	V	P	L	F	A	T	S	E	V	R	E	I
Template Known Secondary structure				T	T		.									T	T	S								S	T	T								T	T	S											S		S	S	G	G	G	S		S						T	T	S							T	T	T	T
Template Predicted Secondary structure							.
Template SS confidence
		91	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		D	P	S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	.	.
Query Conservation																																																																																.	.
Alig confidence													.	.	.																						.	.	.	.	.	.																																						.	.
Template Conservation													.	.	.																						.	.	.	.	.	.
Template Sequence		A	P	N	G	Q	L	L	N	S	V	K	.	.	.	L	S	G	T	P	F	S	S	A	F	L	D	N	G	D	C	L	V	A	C	G	.	.	.	.	.	.	D	A	H	C	F	V	Q	L	N	L	E	S	N	R	I	V	R	R	V	N	A	N	D	I	E	G	V	Q	L	F	F	V	A	Q	L	F	P	L	Q
Template Known Secondary structure			T	T	S								.	.	.		S	S									T	T	S							B	.	.	.	.	.	.	T	T	S							T	T	T									G	G	G	S	B	S				S									T
Template Predicted Secondary structure													.	.	.																						.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	S	L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K
Query Conservation
Alig confidence																																			.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		N	G	G	L	Y	I	C	N	W	Q	G	H	D	R	E	A	G	K	G	K	H	P	Q	L	V	E	I	D	S	E	G	K	V	.	.	.	.	V	W	Q	L	N	D	K	V
Template Known Secondary structure		T	S									T	T		T	T	G	G	G	S				S						T	T	S	B		.	.	.	.							T	T
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions