Job Description P39371 Confidence 99.97% Date Thu Jan 5 12:00:05 GMT 2012 Rank 8 Aligned Residues 264 % Identity 18% Template c1x2rA_ PDB info PDB header:transcription Chain: A: PDB Molecule:kelch-like ech-associated protein 1; PDBTitle: structural basis for the defects of human lung cancer2 somatic mutations in the repression activity of keap1 on3 nrf2 Resolution 1.70 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		D	N	D	T	V	Y	I	G	L	G	S	A	G	.	.	.	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	D	G	N	L	Y	V	F	G	G	I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K
Query Conservation															.	.	.
Alig confidence															.	.	.										.	.												.																										.
Template Conservation																											.	.												.																										.
Template Sequence		V	G	R	L	I	Y	T	A	G	G	Y	F	R	Q	S	L	S	Y	L	E	A	Y	N	P	S	.	.	N	G	S	W	L	R	L	A	D	L	Q	.	V	P	R	S	G	L	A	G	C	V	V	G	G	L	L	Y	A	V	G	G	R	N	N	S	P	.	D	G	N	T	D	S	S	A	L	D	C	Y	N	P	M
Template Known Secondary structure												B	S	S	S	B									T	T	.	.	T	T									S	.	S			B	S							T	T												T	.	T													T	T
Template Predicted Secondary structure																											.	.												.																										.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	S	W	V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N	A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D
Query Conservation
Alig confidence															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	Q	W	S	P	C	A	S	M	S	V	P	.	R	N	R	I	G	V	G	V	I	D	G	H	I	Y	A	V	G	G	S	H	G	C	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	S	V	E	R	Y	E
Template Known Secondary structure		T	T									S	S		.		B	T							T	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.																																			.	.	.	440	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	A	G	A	A	V	V	N	K	G	D	K	T	W	L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S
Query Conservation
Alig confidence															.																											.	.	.																										.	.
Template Conservation															.																											.	.	.																										.	.
Template Sequence		P	E	R	D	E	W	H	L	V	A	P	M	L	.	T	R	R	I	G	V	G	V	A	V	L	N	R	L	L	Y	A	V	G	G	F	D	G	T	N	R	.	.	.	L	N	S	A	E	C	Y	Y	P	E	R	N	E	W	R	M	I	T	P	M	N	T	I	R	S	.	.	G	A	G	V	C	V	L	H	N	C
Template Known Secondary structure		T	T	T	T									S	.	S			B	S							T	T										S	S	S		.	.	.									G	G	G	T									S	S			B	.	.	S							T	T
Template Predicted Secondary structure															.																											.	.	.																										.	.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.		.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.				.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.			.	510	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	F	A	G	G	A	G	F	K	G	S	R	E	N	Y	Q	N	G	K	N	Y	A	H	E	G	L	K	K	S	Y	S	T	D	I	H	L	W	H	N	G	K	W	D	K	S	G	E	L	S	Q	G	R	A	Y	G	V	S	L	P	W	N	N	S	L	L	I	I	G	G	E	T	A	G	G	K	A	V	T	D
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Sequence		I	Y	A	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	G	Q	D	Q	L	N	S	V	E	R	Y	D	V	E	T	E	T	W	T	F	V	A	P	M	R	H	H	R	S	A	L	G	I	T	V	H	Q	G	K	I	Y	V	L	G	G	Y	D	G	H	.	T	F	L	D	S
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B		S	S	S	B									T	T	T										S	S			B	S							T	T										S	S	.	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template SS confidence
		519	520	.	.	.	.																		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.		.	.	.	.	580
		354	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	I	T	V	K	D	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	C	Y	D	P	D	S	D	T
Template Known Secondary structure							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		581	.	.	.	.	.	.	.	.	590

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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