Job Description P39371 Confidence 96.87% Date Thu Jan 5 12:00:05 GMT 2012 Rank 15 Aligned Residues 183 % Identity 22% Template c1qhuA_ PDB info PDB header:binding protein Chain: A: PDB Molecule:protein (hemopexin); PDBTitle: mammalian blood serum haemopexin deglycosylated and in2 complex with its ligand haem Resolution 2.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																				.															.	.	.	.	.	.
Query SS confidence																																																				.															.	.	.	.	.	.
Query Sequence		S	V	L	P	E	T	P	V	P	F	K	S	G	T	G	A	I	D	N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	T	A	L	A	A	.	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	.	.	.	.	.	.	D	G	N	L	Y	V	F	G	G
Query Conservation																																																				.															.	.	.	.	.	.
Alig confidence													.																.	.	.										.	.	.	.	.	.						.															.	.	.	.	.	.
Template Conservation													.																.	.	.										.	.	.	.	.	.
Template Sequence		E	R	W	K	N	F	I	G	P	V	D	.	A	A	F	R	H	G	H	T	S	V	Y	L	I	K	G	.	.	.	D	K	V	W	V	Y	T	S	P	.	.	.	.	.	.	K	S	L	Q	D	E	F	P	G	I	P	F	P	L	D	A	A	V	E	C	H	R	G	E	C	Q	D	E	G	I	L	F	F	Q	G
Template Known Secondary structure				S	T	T			S			S	.						T	T	T							T	.	.	.	T									.	.	.	.	.	.							S	T	T			S	S									B	B	T	B	S	S	S							T
Template Predicted Secondary structure													.																.	.	.										.	.	.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	W	V	K	L	M	S	H	A	P	M	G	M	A	G	H	V	T	F	V	H	N	G	K	A	Y	V	T	G	G	V	N	Q	N	I	F	N	G	Y	F	E	D	L	N	E	A	G	K	D	S	T	A	I	D	K	I	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.												.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	N	R	K	W	F	W	D	L	T	T	G	.	.	T	K	K	E	R	S	W	P	A	V	G	N	C	T	S	A	L	R	W	L	G	R	Y	Y	C	F	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T	T	.	.								T	T	S				S						T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														142	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																														.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	Y	F	D	K	K	A	E	D	Y	F	F	N	K	F	L	L	S	F	D	P	S	T	Q	Q	W	S	Y	A	G	E	S	P	W	Y	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	A	V	V	N	K	G	D	K	T	W
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	F	L	R	F	N	P	V	S	G	E	.	.	.	.	.	V	P	P	G	Y	P	L	D	V	R	D	Y	F	L	S	C	P	G	R	G	H	R	S	H	G	H	E	S	T	R	C	D	P	D	L	V	L	S	A	M	V	S	D	N	H	G	A	T	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T			.	.	.	.	.			T	T									T	S			T	T			S						T	T	T	T	T		T	T										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
																181	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	N	G	E	A	K	P	G	L	R	T	D	A	V	F	E	L	D	F	T	G	N	N	L	K	W	N	K	L	A	P	V	S	S	P	D	G	V	A	G	G	F	A	G	I	S	N	D	S	L	I	F	A	G	G	A
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		V	F	S	G	.	.	.	.	.	.	.	.	S	H	Y	W	R	L	D	T	N	R	D	G	W	H	S	W	P	I	A	H	Q	W	P	Q	G	P	S	T	V	D	A	A	F	S	W	E	D	K	L	Y	L	I	Q	D	T
Template Known Secondary structure					T	.	.	.	.	.	.	.	.	T						T	T	G	G	G							G	G	G	T		T	T	S		S	S		S						T	T							T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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