Job Description P39371 Confidence 94.85% Date Thu Jan 5 12:00:05 GMT 2012 Rank 31 Aligned Residues 112 % Identity 17% Template c1gxdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:72 kda type iv collagenase; PDBTitle: prommp-2/timp-2 complex Resolution 3.10 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																.						.	.															.	.
Query SS confidence																																																.						.	.															.	.
Query Sequence		A	S	V	L	P	E	T	P	V	P	F	K	S	G	T	G	A	I	D	N	D	T	V	Y	I	G	L	G	S	A	G	T	A	W	Y	K	L	D	T	Q	A	K	D	K	K	W	.	T	A	L	A	A	.	.	F	P	G	G	P	R	D	Q	A	T	S	A	F	I	.	.	D	G	N	L	Y	V	F	G	G	I
Query Conservation																																																.						.	.															.	.
Alig confidence																														.	.	.																.						.	.															.	.										.
Template Conservation																														.	.	.																																																	.
Template Sequence		A	T	F	W	P	E	L	P	E	K	I	D	A	V	Y	E	A	P	Q	E	E	K	A	V	F	F	A	G	.	.	.	N	E	Y	W	I	Y	S	A	S	T	L	E	R	G	Y	P	K	P	L	T	S	L	G	L	P	P	D	V	Q	R	V	D	A	A	F	N	W	S	K	N	K	K	T	Y	I	F	A	G	.
Template Known Secondary structure		G	G	T		S	S	S		S	S								T	T	T	T							T	.	.	.	T							T	T				T	T		S			S	T	T	T	T	S		T	T	T	T									S	S	S								T	.
Template Predicted Secondary structure																														.	.	.																																																	.
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.				.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.							.															.	.
Query SS confidence																									.	.	.	.	.							.															.	.
Query Sequence		G	K	N	S	E	G	L	T	Q	V	F	N	D	V	H	K	Y	N	P	K	T	N	S	.	.	.	.	.	W	V	K	L	M	S	.	H	A	P	M	G	M	A	G	H	V	T	F	V	H	.	.	N	G	K	A	Y	V	T	G	G
Query Conservation																									.	.	.	.	.							.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.							.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	D	K	F	W	R	Y	N	E	V	K	K	K	M	D	P	G	F	P	K	L	I	A	D	A	W	N	A	I	P	D	N	L	D	A	V	V	D	L	Q	G	G	G	H	S	Y	F	F	K	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T					B		T	T	S	S	S			T	T					T	T	S	S			S			S	S		S						S	S	S		B						T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions