BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (203 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C6APE4 Holliday junction DNA helicase RuvA n=4 Tax=Gamm... 249 3e-65 UniRef50_Q483C5 Holliday junction ATP-dependent DNA helicase ruv... 223 2e-57 UniRef50_Q1QWF9 Holliday junction DNA helicase subunit RuvA n=4 ... 204 2e-51 UniRef50_Q0A5Q3 Holliday junction ATP-dependent DNA helicase ruv... 203 3e-51 UniRef50_A6VXD2 Holliday junction ATP-dependent DNA helicase ruv... 199 5e-50 UniRef50_A8PMB3 Holliday junction DNA helicase RuvA n=1 Tax=Rick... 194 1e-48 UniRef50_B5JXJ1 Holliday junction DNA helicase RuvA n=1 Tax=gamm... 188 1e-46 UniRef50_Q5X5R9 Holliday junction ATP-dependent DNA helicase ruv... 187 1e-46 UniRef50_Q31H84 Holliday junction ATP-dependent DNA helicase ruv... 180 2e-44 UniRef50_Q21HN5 Holliday junction ATP-dependent DNA helicase ruv... 180 2e-44 UniRef50_B6BW72 Holliday junction DNA helicase RuvA n=1 Tax=beta... 176 5e-43 UniRef50_Q6F992 Holliday junction ATP-dependent DNA helicase ruv... 174 2e-42 UniRef50_B7GYB6 Holliday junction ATP-dependent DNA helicase ruv... 172 5e-42 UniRef50_A4IY85 Holliday junction ATP-dependent DNA helicase ruv... 171 2e-41 UniRef50_Q5P2U6 Holliday junction ATP-dependent DNA helicase ruv... 169 5e-41 UniRef50_C1SHM7 Holliday junction DNA helicase, RuvA subunit n=1... 168 1e-40 UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruv... 165 7e-40 UniRef50_C4KD09 Holliday junction DNA helicase RuvA n=12 Tax=Bac... 165 7e-40 UniRef50_A5CX58 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 157 2e-37 UniRef50_B9ZJ99 Holliday junction DNA helicase RuvA n=1 Tax=Thio... 150 2e-35 UniRef50_A5EXH7 Holliday junction ATP-dependent DNA helicase ruv... 148 1e-34 UniRef50_Q2LRA9 Holliday junction ATP-dependent DNA helicase ruv... 148 1e-34 UniRef50_C8W4C8 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 145 7e-34 UniRef50_B5JGR2 Holliday junction DNA helicase RuvA n=1 Tax=Verr... 145 1e-33 UniRef50_C2KW74 Possible crossover junction endonuclease RuvA n=... 142 5e-33 UniRef50_A8S4H4 Putative uncharacterized protein n=1 Tax=Clostri... 142 5e-33 UniRef50_B9XLI7 Holliday junction DNA helicase RuvA n=3 Tax=Verr... 140 3e-32 UniRef50_B6GE75 Putative uncharacterized protein n=2 Tax=Collins... 138 1e-31 UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veil... 137 1e-31 UniRef50_C6JAH0 Holliday junction DNA helicase RuvA n=1 Tax=Rumi... 136 4e-31 UniRef50_Q1Q054 Strongly similar to DNA helicase RuvA n=1 Tax=Ca... 136 4e-31 UniRef50_C0GKF3 Holliday junction DNA helicase RuvA n=1 Tax=Deth... 136 5e-31 UniRef50_A5WFC8 Holliday junction ATP-dependent DNA helicase ruv... 136 5e-31 UniRef50_A3DBU3 Holliday junction ATP-dependent DNA helicase ruv... 135 9e-31 UniRef50_B5EAH2 Holliday junction ATP-dependent DNA helicase ruv... 134 1e-30 UniRef50_A9GQJ8 Holliday junction DNA helicase n=1 Tax=Sorangium... 134 2e-30 UniRef50_A6DHC9 Holliday junction DNA helicase motor protein n=1... 134 2e-30 UniRef50_C9KK52 Holliday junction DNA helicase RuvA n=1 Tax=Mits... 134 2e-30 UniRef50_B3QVA9 Holliday junction ATP-dependent DNA helicase ruv... 134 2e-30 UniRef50_A0L4V9 Holliday junction ATP-dependent DNA helicase ruv... 134 2e-30 UniRef50_A4J536 Holliday junction ATP-dependent DNA helicase ruv... 133 4e-30 UniRef50_D0J979 Holliday junction DNA helicase motor protein n=2... 132 7e-30 UniRef50_A4EAI5 Putative uncharacterized protein n=1 Tax=Collins... 132 8e-30 UniRef50_A9KNV9 Holliday junction ATP-dependent DNA helicase ruv... 131 1e-29 UniRef50_B1ZN17 Holliday junction ATP-dependent DNA helicase ruv... 131 2e-29 UniRef50_C1A615 Holliday junction ATP-dependent DNA helicase ruv... 130 3e-29 UniRef50_B1I477 Holliday junction ATP-dependent DNA helicase ruv... 130 3e-29 UniRef50_Q5I6C8 Holliday junction DNA helicase RuvA n=17 Tax=Bac... 130 3e-29 UniRef50_B2UKW6 Holliday junction DNA helicase RuvA n=1 Tax=Akke... 130 3e-29 UniRef50_Q0W1R7 Holliday junction resolvasome, DNA-binding subun... 129 5e-29 UniRef50_Q30R94 Holliday junction ATP-dependent DNA helicase ruv... 129 6e-29 UniRef50_D2QMR9 Holliday junction DNA helicase RuvA n=1 Tax=Spir... 129 7e-29 UniRef50_Q2S5C8 Holliday junction ATP-dependent DNA helicase ruv... 129 7e-29 UniRef50_C0ZAN3 Holliday junction ATP-dependent DNA helicase ruv... 129 7e-29 UniRef50_C6P9B0 Holliday junction DNA helicase RuvA n=1 Tax=Ther... 128 1e-28 UniRef50_Q3A231 Holliday junction ATP-dependent DNA helicase ruv... 128 1e-28 UniRef50_Q1D2J5 Holliday junction ATP-dependent DNA helicase ruv... 127 2e-28 UniRef50_A5D3G0 Holliday junction resolvasome, DNA-binding subun... 127 2e-28 UniRef50_C1F8Z2 Holliday junction ATP-dependent DNA helicase ruv... 127 2e-28 UniRef50_C9LUM4 Holliday junction DNA helicase RuvA n=1 Tax=Sele... 127 2e-28 UniRef50_Q24UN6 Holliday junction ATP-dependent DNA helicase ruv... 127 2e-28 UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 T... 127 3e-28 UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-he... 126 3e-28 UniRef50_C4Z030 Holliday junction ATP-dependent DNA helicase ruv... 126 4e-28 UniRef50_Q6GG62 Holliday junction ATP-dependent DNA helicase ruv... 126 4e-28 UniRef50_A6TQM4 Holliday junction ATP-dependent DNA helicase ruv... 126 6e-28 UniRef50_C9RMJ7 Holliday junction DNA helicase RuvA n=1 Tax=Fibr... 125 8e-28 UniRef50_C8WQH8 Holliday junction DNA helicase RuvA n=2 Tax=Alic... 125 1e-27 UniRef50_Q6MKB7 Holliday junction ATP-dependent DNA helicase ruv... 124 2e-27 UniRef50_B2A5L5 Holliday junction ATP-dependent DNA helicase ruv... 124 2e-27 UniRef50_B8CXG3 Holliday junction ATP-dependent DNA helicase ruv... 123 4e-27 UniRef50_Q67Q98 Holliday junction ATP-dependent DNA helicase ruv... 123 4e-27 UniRef50_UPI0001C37714 Holliday junction DNA helicase RuvA n=1 T... 123 4e-27 UniRef50_Q6MFA5 Holliday junction ATP-dependent DNA helicase ruv... 122 5e-27 UniRef50_B6YR38 Holliday junction ATP-dependent DNA helicase ruv... 122 1e-26 UniRef50_C8W783 Holliday junction DNA helicase RuvA n=2 Tax=Atop... 122 1e-26 UniRef50_C2D6U7 Crossover junction endonuclease RuvA n=1 Tax=Ato... 121 1e-26 UniRef50_Q3ATE5 Holliday junction ATP-dependent DNA helicase ruv... 120 2e-26 UniRef50_C4XIJ9 Holliday junction ATP-dependent DNA helicase ruv... 120 3e-26 UniRef50_D1N374 Holliday junction DNA helicase RuvA n=1 Tax=Vict... 120 3e-26 UniRef50_Q3ZZK6 Holliday junction ATP-dependent DNA helicase ruv... 119 4e-26 UniRef50_B5YKF0 Holliday junction ATP-dependent DNA helicase ruv... 119 5e-26 UniRef50_B4WL13 Holliday junction DNA helicase RuvA n=1 Tax=Syne... 119 6e-26 UniRef50_C0ES21 Putative uncharacterized protein n=1 Tax=Eubacte... 119 6e-26 UniRef50_C0WEE9 Holliday junction DNA helicase ruvA n=1 Tax=Acid... 119 7e-26 UniRef50_C1D1T9 Putative Holliday junction ATP-dependent DNA hel... 118 1e-25 UniRef50_C2FZN8 Crossover junction endodeoxyribonuclease n=2 Tax... 118 1e-25 UniRef50_C7N4C8 Holliday junction DNA helicase, RuvA subunit n=4... 118 1e-25 UniRef50_A4QEN4 Holliday junction ATP-dependent DNA helicase ruv... 118 1e-25 UniRef50_Q1AWE1 Holliday junction ATP-dependent DNA helicase ruv... 117 2e-25 UniRef50_B0NYV4 Putative uncharacterized protein n=2 Tax=Clostri... 117 2e-25 UniRef50_C8QYM5 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 117 3e-25 UniRef50_B0K955 Holliday junction ATP-dependent DNA helicase ruv... 117 3e-25 UniRef50_C0EG91 Putative uncharacterized protein (Fragment) n=1 ... 117 3e-25 UniRef50_Q4L6Y7 Holliday junction ATP-dependent DNA helicase ruv... 117 3e-25 UniRef50_B0VHI7 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 117 3e-25 UniRef50_B3DZD2 Holliday junction resolvasome, DNA-binding subun... 116 4e-25 UniRef50_C9R8U6 Holliday junction DNA helicase RuvA n=1 Tax=Ammo... 116 5e-25 UniRef50_C0ABP1 Holliday junction resolvasome DNA-binding subuni... 115 8e-25 UniRef50_B2RJ07 Holliday junction ATP-dependent DNA helicase ruv... 115 8e-25 UniRef50_B2HN62 Holliday junction ATP-dependent DNA helicase ruv... 115 1e-24 UniRef50_Q2FPZ9 Holliday junction DNA helicase RuvA n=1 Tax=Meth... 115 1e-24 UniRef50_B5IKU6 Holliday junction DNA helicase RuvA n=1 Tax=Cyan... 115 1e-24 UniRef50_A8FFR3 Holliday junction ATP-dependent DNA helicase ruv... 115 1e-24 UniRef50_B3DRX9 Holliday junction ATP-dependent DNA helicase ruv... 114 1e-24 UniRef50_C2BWM5 Holliday junction DNA helicase motor protein n=3... 114 2e-24 UniRef50_A8SPH1 Putative uncharacterized protein n=2 Tax=Clostri... 114 2e-24 UniRef50_C7GZ09 Holliday junction DNA helicase RuvA n=1 Tax=Euba... 114 2e-24 UniRef50_B7K970 Holliday junction ATP-dependent DNA helicase ruv... 113 3e-24 UniRef50_Q252Y0 Holliday junction ATP-dependent DNA helicase ruv... 113 3e-24 UniRef50_Q2JWZ2 Holliday junction ATP-dependent DNA helicase ruv... 113 4e-24 UniRef50_C4GBB6 Putative uncharacterized protein n=1 Tax=Shuttle... 113 4e-24 UniRef50_A3CR11 Holliday junction ATP-dependent DNA helicase ruv... 113 4e-24 UniRef50_Q5L9Q7 Holliday junction ATP-dependent DNA helicase ruv... 113 5e-24 UniRef50_B0TF69 Holliday junction DNA helicase ruva n=1 Tax=Heli... 112 6e-24 UniRef50_Q183P4 Holliday junction DNA helicase n=7 Tax=Clostridi... 112 1e-23 UniRef50_Q0F2I8 Putative Holliday junction DNA helicase RuvA n=1... 112 1e-23 UniRef50_Q7NCU2 Holliday junction ATP-dependent DNA helicase ruv... 112 1e-23 UniRef50_B6XV05 Putative uncharacterized protein n=2 Tax=Bifidob... 111 1e-23 UniRef50_A8YTI1 Holliday junction ATP-dependent DNA helicase ruv... 111 2e-23 UniRef50_D0LZE6 Holliday junction DNA helicase RuvA n=1 Tax=Hali... 111 2e-23 UniRef50_UPI00016C0EB8 Holliday junction DNA helicase RuvA n=1 T... 111 2e-23 UniRef50_C0W3R8 Crossover junction endodeoxyribonuclease n=1 Tax... 110 2e-23 UniRef50_C0GT45 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 110 2e-23 UniRef50_A5GTL6 Holliday junction ATP-dependent DNA helicase ruv... 110 3e-23 UniRef50_Q11Z44 Holliday junction ATP-dependent DNA helicase ruv... 110 3e-23 UniRef50_C4V2G2 Crossover junction endodeoxyribonuclease n=1 Tax... 110 4e-23 UniRef50_C4FZH5 Putative uncharacterized protein n=1 Tax=Abiotro... 110 4e-23 UniRef50_Q0TP12 Holliday junction ATP-dependent DNA helicase ruv... 110 4e-23 UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1... 109 4e-23 UniRef50_A6NV14 Putative uncharacterized protein n=2 Tax=Bacteri... 109 4e-23 UniRef50_B3EU33 Holliday junction ATP-dependent DNA helicase ruv... 109 5e-23 UniRef50_Q2W2A3 Holliday junction ATP-dependent DNA helicase ruv... 109 5e-23 UniRef50_C7LQQ8 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 109 6e-23 UniRef50_C9LLE4 Holliday junction DNA helicase RuvA n=1 Tax=Dial... 109 7e-23 UniRef50_C3XJP3 Holliday junction DNA helicase motor protein n=1... 108 8e-23 UniRef50_C5VM52 Holliday junction DNA helicase RuvA n=5 Tax=Bact... 108 9e-23 UniRef50_C0YLR6 Crossover junction endonuclease RuvA n=1 Tax=Chr... 108 1e-22 UniRef50_A0LUK6 Holliday junction ATP-dependent DNA helicase ruv... 108 1e-22 UniRef50_C7M5Z6 Holliday junction DNA helicase RuvA n=2 Tax=Capn... 108 1e-22 UniRef50_A7I4H5 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 108 2e-22 UniRef50_D1PT53 Crossover junction endoribonuclease subunit A n=... 108 2e-22 UniRef50_Q4JVD8 Holliday junction ATP-dependent DNA helicase ruv... 107 2e-22 UniRef50_C6C065 Holliday junction ATP-dependent DNA helicase ruv... 107 2e-22 UniRef50_A6Q8H2 Holliday junction ATP-dependent DNA helicase ruv... 107 2e-22 UniRef50_Q0AX15 Holliday junction ATP-dependent DNA helicase ruv... 107 2e-22 UniRef50_UPI0001C338F3 Holliday junction DNA helicase, RuvA subu... 107 3e-22 UniRef50_B9L9P0 Holliday junction ATP-dependent DNA helicase ruv... 107 3e-22 UniRef50_C5EYK8 Holliday junction ATP-dependent DNA helicase ruv... 107 3e-22 UniRef50_B9KYT2 Holliday junction ATP-dependent DNA helicase ruv... 107 3e-22 UniRef50_C6X0H6 Holliday junction DNA helicase RuvA n=1 Tax=Flav... 106 4e-22 UniRef50_D1CDK2 Holliday junction DNA helicase RuvA n=1 Tax=Ther... 106 6e-22 UniRef50_C1Q8J8 Holliday junction DNA helicase subunit RuvA n=1 ... 106 6e-22 UniRef50_Q7VCI6 Holliday junction ATP-dependent DNA helicase ruv... 106 6e-22 UniRef50_D0GJ52 Holliday junction DNA helicase RuvA n=1 Tax=Lept... 105 9e-22 UniRef50_D1VUW2 Holliday junction DNA helicase RuvA n=1 Tax=Pept... 105 9e-22 UniRef50_A5IKQ6 Holliday junction ATP-dependent DNA helicase ruv... 105 1e-21 UniRef50_B2S3D5 Holliday junction ATP-dependent DNA helicase ruv... 105 1e-21 UniRef50_C9MZD4 Holliday junction DNA helicase RuvA n=1 Tax=Lept... 104 2e-21 UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruv... 104 2e-21 UniRef50_B1X417 Putative holliday junction DNA helicase RuvA n=1... 104 2e-21 UniRef50_B8ZUI1 Holliday junction ATP-dependent DNA helicase ruv... 104 2e-21 UniRef50_D2RLD5 Holliday junction DNA helicase RuvA n=1 Tax=Acid... 104 2e-21 UniRef50_Q8YZT2 Holliday junction ATP-dependent DNA helicase ruv... 103 3e-21 UniRef50_D1C4E7 Holliday junction DNA helicase RuvA n=1 Tax=Spha... 103 3e-21 UniRef50_Q2RVF6 Holliday junction ATP-dependent DNA helicase ruv... 103 3e-21 UniRef50_B0S1J4 Holliday junction ATP-dependent DNA helicase ruv... 103 3e-21 UniRef50_B4R9Z1 Holliday junction ATP-dependent DNA helicase ruv... 103 3e-21 UniRef50_B2GB19 Holliday junction ATP-dependent DNA helicase ruv... 103 5e-21 UniRef50_A9NF61 Holliday junction ATP-dependent DNA helicase ruv... 103 5e-21 UniRef50_C0QZY1 Holliday junction DNA helicase RuvA n=1 Tax=Brac... 102 7e-21 UniRef50_A5CEJ4 Holliday junction ATP-dependent DNA helicase ruv... 102 8e-21 UniRef50_A8RC90 Putative uncharacterized protein n=3 Tax=Erysipe... 102 8e-21 UniRef50_B1W3G3 Holliday junction ATP-dependent DNA helicase ruv... 102 1e-20 UniRef50_C7NI46 Holliday junction DNA helicase subunit RuvA n=2 ... 101 1e-20 UniRef50_C7NC64 Holliday junction DNA helicase RuvA n=2 Tax=Fuso... 101 2e-20 UniRef50_A5UZS3 Holliday junction ATP-dependent DNA helicase ruv... 101 2e-20 UniRef50_A7VWM3 Putative uncharacterized protein n=1 Tax=Clostri... 101 2e-20 UniRef50_B5XJ07 Holliday junction ATP-dependent DNA helicase ruv... 100 2e-20 UniRef50_D1AXU1 Holliday junction DNA helicase RuvA n=1 Tax=Stre... 100 2e-20 UniRef50_Q5NR75 Holliday junction ATP-dependent DNA helicase ruv... 100 2e-20 UniRef50_A8UZA0 Holliday junction resolvasome DNA-binding subuni... 100 3e-20 UniRef50_C8NZK0 Holliday junction DNA helicase RuvA n=1 Tax=Erys... 100 3e-20 UniRef50_C7H8Z7 Holliday junction DNA helicase RuvA n=3 Tax=Rumi... 99 7e-20 UniRef50_C7LZI9 Holliday junction DNA helicase RuvA n=1 Tax=Acid... 99 7e-20 UniRef50_UPI000038462D COG0632: Holliday junction resolvasome, D... 99 8e-20 UniRef50_C7RHH1 Holliday junction DNA helicase RuvA n=5 Tax=Anae... 99 8e-20 UniRef50_Q6A8K8 Holliday junction ATP-dependent DNA helicase ruv... 99 1e-19 UniRef50_B1MCJ1 Holliday junction ATP-dependent DNA helicase ruv... 99 1e-19 UniRef50_A1SJA6 Holliday junction ATP-dependent DNA helicase ruv... 99 1e-19 UniRef50_UPI0001C31CBF Holliday junction DNA helicase RuvA n=1 T... 99 1e-19 UniRef50_P73554 Holliday junction ATP-dependent DNA helicase ruv... 98 1e-19 UniRef50_C3RKD6 Holliday junction DNA helicase subunit RuvA n=3 ... 98 2e-19 UniRef50_C8NUB4 Holliday junction DNA helicase RuvA n=1 Tax=Cory... 98 2e-19 UniRef50_Q5FQC5 Holliday junction ATP-dependent DNA helicase ruv... 98 2e-19 UniRef50_A7HL71 Holliday junction ATP-dependent DNA helicase ruv... 97 2e-19 UniRef50_A0RP49 Holliday junction ATP-dependent DNA helicase ruv... 97 3e-19 UniRef50_C3WBK1 Holliday junction DNA helicase ruvA n=1 Tax=Fuso... 97 3e-19 UniRef50_C6JI67 Holliday junction DNA helicase ruvA n=5 Tax=Fuso... 97 3e-19 UniRef50_A1UR85 Holliday junction ATP-dependent DNA helicase ruv... 96 6e-19 UniRef50_Q3ABX9 Holliday junction ATP-dependent DNA helicase ruv... 96 6e-19 UniRef50_Q1J0F6 Holliday junction ATP-dependent DNA helicase ruv... 96 6e-19 UniRef50_C0VVS8 Holliday junction DNA helicase motor protein n=2... 96 7e-19 UniRef50_Q2RHT6 Holliday junction ATP-dependent DNA helicase ruv... 96 7e-19 UniRef50_Q8REJ7 Holliday junction ATP-dependent DNA helicase ruv... 96 9e-19 UniRef50_B8DNJ8 Holliday junction ATP-dependent DNA helicase ruv... 96 9e-19 UniRef50_A9B9X1 Holliday junction ATP-dependent DNA helicase ruv... 95 1e-18 UniRef50_UPI000196B988 hypothetical protein CATMIT_00479 n=1 Tax... 95 1e-18 UniRef50_C1DXL3 Holliday junction DNA helicase RuvA n=3 Tax=Sulf... 95 1e-18 UniRef50_UPI000038343B COG0632: Holliday junction resolvasome, D... 94 2e-18 UniRef50_Q8U9K5 Holliday junction ATP-dependent DNA helicase ruv... 94 4e-18 UniRef50_D2MP66 Holliday junction DNA helicase RuvA n=1 Tax=Bull... 93 4e-18 UniRef50_C7TAK4 Holliday junction DNA helicase RuvA n=9 Tax=Lact... 93 4e-18 UniRef50_A8SLR3 Putative uncharacterized protein n=1 Tax=Parvimo... 93 6e-18 UniRef50_A8LHP9 Holliday junction ATP-dependent DNA helicase ruv... 93 6e-18 UniRef50_C9M7E3 Holliday junction DNA helicase RuvA n=1 Tax=Jonq... 92 7e-18 UniRef50_Q03B18 Holliday junction ATP-dependent DNA helicase ruv... 92 8e-18 UniRef50_Q7U7F0 Holliday junction ATP-dependent DNA helicase ruv... 92 9e-18 UniRef50_C7MCB9 Holliday junction DNA helicase, RuvA subunit n=1... 92 1e-17 UniRef50_D1Y1N8 Holliday junction ATP-dependent DNA helicase Ruv... 92 1e-17 UniRef50_A6GER9 Holliday junction DNA helicase motor protein n=1... 92 1e-17 UniRef50_C1XYW5 Holliday junction DNA helicase subunit RuvA n=1 ... 92 1e-17 UniRef50_UPI000050F77A Holliday junction DNA helicase, RuvA subu... 92 1e-17 UniRef50_C3J9S7 Holliday junction DNA helicase RuvA n=2 Tax=Bact... 91 2e-17 UniRef50_Q7V7T9 Holliday junction ATP-dependent DNA helicase ruv... 91 2e-17 UniRef50_Q0ALX8 Holliday junction ATP-dependent DNA helicase ruv... 91 2e-17 UniRef50_A2BQZ1 Holliday junction ATP-dependent DNA helicase ruv... 91 2e-17 UniRef50_Q729U3 Holliday junction ATP-dependent DNA helicase ruv... 91 3e-17 UniRef50_A9BIJ5 Holliday junction ATP-dependent DNA helicase ruv... 91 3e-17 UniRef50_A3VP65 Holliday junction DNA helicase RuvA n=1 Tax=Parv... 90 4e-17 UniRef50_Q83GK0 Holliday junction ATP-dependent DNA helicase ruv... 90 4e-17 UniRef50_B8J094 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 90 5e-17 UniRef50_B0PAT7 Putative uncharacterized protein n=1 Tax=Anaerot... 90 5e-17 UniRef50_Q1GE12 Holliday junction DNA helicase RuvA n=12 Tax=Rho... 90 6e-17 UniRef50_C3XDN4 Holliday junction DNA helicase motor protein n=1... 89 6e-17 UniRef50_C0W1Q3 Possible crossover junction endodeoxyribonucleas... 89 8e-17 UniRef50_A5CS07 Holliday junction ATP-dependent DNA helicase ruv... 89 8e-17 UniRef50_B1C6M7 Putative uncharacterized protein n=1 Tax=Anaerof... 89 1e-16 UniRef50_A4XJS2 Holliday junction ATP-dependent DNA helicase ruv... 87 3e-16 UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae... 87 3e-16 UniRef50_B8H455 Holliday junction ATP-dependent DNA helicase ruv... 87 4e-16 UniRef50_B6ALZ0 Probable Holliday junction DNA helicase (RuvA) n... 86 5e-16 UniRef50_A0JXB2 Holliday junction ATP-dependent DNA helicase ruv... 86 5e-16 UniRef50_C1TMQ3 Holliday junction DNA helicase, RuvA subunit n=1... 86 8e-16 UniRef50_C0QRQ4 Holliday junction DNA helicase RuvA n=1 Tax=Pers... 86 1e-15 UniRef50_B3R0J1 Holliday junction ATP-dependent DNA helicase ruv... 85 1e-15 UniRef50_Q46L68 Holliday junction ATP-dependent DNA helicase ruv... 84 2e-15 UniRef50_C4LIX8 Holliday junction ATP-dependent DNA helicase ruv... 84 2e-15 UniRef50_C6XF74 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 84 3e-15 UniRef50_A5KTE9 Holliday junction DNA helicase RuvA n=2 Tax=cand... 83 5e-15 >UniRef50_C6APE4 Holliday junction DNA helicase RuvA n=4 Tax=Gammaproteobacteria RepID=C6APE4_AGGAN Length = 204 Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 124/204 (60%), Positives = 157/204 (76%), Gaps = 1/204 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L GI++EKQPP +L++V GVGYE+ +PMT FY LPE G++ +FTH VVREDA LL Sbjct: 1 MIGHLTGILMEKQPPEILLDVQGVGYELLLPMTSFYNLPEVGKQTSLFTHLVVREDAHLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+ K +RTLF+ELIKTNGVGPKLALAILS MS +F A+EREE+ LVK+PGIGKKT Sbjct: 61 FGFSQKTDRTLFRELIKTNGVGPKLALAILSAMSVDEFAYAIEREELSRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHG-DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERL+VE+K +FK + D F L + + AT + EAVAAL+ALGYKP +A + Sbjct: 121 AERLLVELKGKFKEVKTHDFFVQGDHLPSVNAETVATIEPSNEAVAALIALGYKPLDAEK 180 Query: 180 MVSKIARPDASSETLIREALRAAL 203 MV K+++P+ SSE LIREAL+AAL Sbjct: 181 MVKKVSKPELSSEQLIREALKAAL 204 >UniRef50_Q483C5 Holliday junction ATP-dependent DNA helicase ruvA n=346 Tax=Gammaproteobacteria RepID=RUVA_COLP3 Length = 211 Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 112/211 (53%), Positives = 147/211 (69%), Gaps = 8/211 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG+++EK P +LIE GVGYEV MPMT Y LPE Q+A ++THFVVREDAQLL Sbjct: 1 MIGRLRGMLVEKNSPEILIECAGVGYEVTMPMTSIYALPELEQQATIYTHFVVREDAQLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK ER LF+ LIK NGVGPKLALAILS MSA QFV+ V +++ A+VK+PG+GKKT Sbjct: 61 YGFANKVERKLFRLLIKVNGVGPKLALAILSNMSADQFVSCVRHDDISAIVKIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAAD-----LVLTSPASPAT---DDAEQEAVAALVALGY 172 AERL++EM+DR K +D L++ S T +D + +A+ AL++LGY Sbjct: 121 AERLLIEMRDRLKDWQAQQIHLVSDDGVIPEQLSAELSQETTFVNDNKGDAINALLSLGY 180 Query: 173 KPQEASRMVSKIARPDASSETLIREALRAAL 203 K +A + V + SSE +IR+AL++ + Sbjct: 181 KQVQADKAVKSVYNRGMSSENIIRDALKSMI 211 >UniRef50_Q1QWF9 Holliday junction DNA helicase subunit RuvA n=4 Tax=Proteobacteria RepID=Q1QWF9_CHRSD Length = 206 Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 110/201 (54%), Positives = 136/201 (67%), Gaps = 5/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG ++EKQPP ++++VGGVGYE+ MT LP G+E + TH VREDA LL Sbjct: 3 MIGRLRGTLLEKQPPWIVVDVGGVGYELETSMTTLLALPGPGEEVQLHTHLAVREDAHLL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ER LF+ LIK NGVGPKLALAILSGM + F+ V +++ AL +LPG+GKKT Sbjct: 63 YGFARGDERQLFRALIKVNGVGPKLALAILSGMDQEAFIRCVMEDDIKALTRLPGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPAT--DDAEQEAVAALVALGYKPQEAS 178 AERL+VEM+DRF H L L ASP T D + +A +ALVALGYKP EAS Sbjct: 123 AERLVVEMRDRFP--HWQLEQENGLHALELGASPTTAAPDPQADAESALVALGYKPTEAS 180 Query: 179 RMVSKIARPDASSETLIREAL 199 RM+S + S+E LI+ AL Sbjct: 181 RMLSGL-DDGLSTEGLIKAAL 200 >UniRef50_Q0A5Q3 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Proteobacteria RepID=RUVA_ALHEH Length = 208 Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 105/209 (50%), Positives = 142/209 (67%), Gaps = 8/209 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G + E+ PP +L++VGGVGYE+ PM+ FY LP Q ++TH VR+D Q L Sbjct: 1 MIGRLHGTVAERHPPALLLDVGGVGYELEAPMSTFYALPAGDQAVTLWTHLAVRDDGQAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ER LF+ LI+ +GVGPKLALA+LSGM+A+ +ERE+V L +LPG+G+KT Sbjct: 61 YGFASRAERDLFRVLIRISGVGPKLALALLSGMNAEGLQRCIEREDVATLTRLPGVGRKT 120 Query: 121 AERLIVEMKDRFKGL-----HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 A+RLIVE++DR GL G + L +PA P + ++AV+ALVALGYKP Sbjct: 121 AQRLIVELRDRLDGLLPAASGGVPARTGSGEQLDAPAGP--QGSREDAVSALVALGYKPA 178 Query: 176 EASRMVSKI-ARPDASSETLIREALRAAL 203 EA R+V+ + D SE LIR AL+AA+ Sbjct: 179 EAGRLVNAVPGANDLPSEELIRRALQAAV 207 >UniRef50_A6VXD2 Holliday junction ATP-dependent DNA helicase ruvA n=30 Tax=Proteobacteria RepID=RUVA_MARMS Length = 200 Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 97/204 (47%), Positives = 141/204 (69%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ G +IEK PP ++++V G+GYEV MT Y+LP+ G + +FTH +V+ED+ L Sbjct: 1 MIGRIVGTLIEKTPPELMVDVNGIGYEVSASMTTIYDLPQIGGQVTLFTHLLVKEDSHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K ER LF+ LIK NG+GPK+ALAILS MS+++ + V+ +V AL ++PG+GKKT Sbjct: 61 YGFIDKNERALFRVLIKVNGIGPKMALAILSSMSSEELITNVQESDVTALTRIPGVGKKT 120 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERLI+E++D+ + DLF+ A L D QEA AAL++LGYKPQEA++ Sbjct: 121 AERLIIELRDKLGQAAKTDLFSAPAVL------RQVQADPRQEAEAALISLGYKPQEAAK 174 Query: 180 MVSKIARPDASSETLIREALRAAL 203 ++ + A+SE +I+ AL+ L Sbjct: 175 AIAGVPVDAANSEDVIKAALKGML 198 >UniRef50_A8PMB3 Holliday junction DNA helicase RuvA n=1 Tax=Rickettsiella grylli RepID=A8PMB3_9COXI Length = 199 Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 98/202 (48%), Positives = 134/202 (66%), Gaps = 6/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGG-VGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI RLRGI++EKQPP++L+EV YE+ M FY+LP G++ ++T F+VRED Sbjct: 1 MINRLRGILVEKQPPILLVEVANAFTYEIQASMHTFYQLPHCGEKVFLYTQFIVREDGHF 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+ +ER LF +L+K +GVGPK+AL ILS + +FV+ VE++ V +L +PGIGKK Sbjct: 61 LYGFSTPEERFLFTQLLKVSGVGPKVALGILSKIEVTEFVSCVEQQNVNSLQAVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERLI+EM+DR + L + P +L + +Q+A+AAL+ALGYK QEASR Sbjct: 121 TAERLIIEMRDRLRNLSHN--QPE---ILDKNTIQSLKHIQQDAIAALMALGYKNQEASR 175 Query: 180 MVSKIARPDASSETLIREALRA 201 V +I S E LIR AL Sbjct: 176 AVLRIKDASLSLEALIRHALNT 197 >UniRef50_B5JXJ1 Holliday junction DNA helicase RuvA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXJ1_9GAMM Length = 205 Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/206 (49%), Positives = 133/206 (64%), Gaps = 6/206 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G +I KQ P +L++V GVGYEV P++ +ELP GQ +V H VREDA L Sbjct: 1 MIGRLSGTLISKQAPHLLVDVNGVGYEVEAPLSTVFELPAEGQAVVVLIHTHVREDAIQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 + F ER F+ LIK NGVG K+ALAI+SG SA+ F V++E+ AL KLPG+GKKT Sbjct: 61 FAFGTDIERRFFRSLIKINGVGAKMALAIMSGASAETFAQWVDQEDTAALTKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLF---TPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AERL++EM+DR L ++F P+ S + A E EAVAAL LGY+ EA Sbjct: 121 AERLVIEMRDR---LDKEVFMGAVPSLPKAGVSATASAPMSREDEAVAALEGLGYRAAEA 177 Query: 178 SRMVSKIARPDASSETLIREALRAAL 203 +MV+K+A+ D +E +IR AL+ L Sbjct: 178 RKMVAKVAQDDLPTEEMIRLALQQTL 203 >UniRef50_Q5X5R9 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Legionella RepID=RUVA_LEGPA Length = 199 Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 14/204 (6%) Query: 1 MIGRLRGIIIEK-QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G II+K QP ++++V GVGY+V + F+++ Q + H +VREDA L Sbjct: 1 MIGWLHGQIIDKHQPGKLVLDVNGVGYDVETSLNTFFQIENGNQPIGLHIHTIVREDALL 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +K+ER+LF+ LIK NGVGPKLA+ +LS +S ++F+ + +E L KLPGIGKK Sbjct: 61 LYGFLDKEERSLFRSLIKVNGVGPKLAMTVLSSISPKEFIQCIHQENAALLTKLPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHG---DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 TAERL+VEM+D K G D F A + ++QEA++AL ALGYKPQE Sbjct: 121 TAERLVVEMRDSIKQFDGSVSDTFQKQA----------GSTHSQQEAISALEALGYKPQE 170 Query: 177 ASRMVSKIARPDASSETLIREALR 200 A ++V+KI + S E LIREAL+ Sbjct: 171 AWKVVNKIDNGNKSCEQLIREALQ 194 >UniRef50_Q31H84 Holliday junction ATP-dependent DNA helicase ruvA n=7 Tax=Gammaproteobacteria RepID=RUVA_THICR Length = 200 Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 94/201 (46%), Positives = 130/201 (64%), Gaps = 4/201 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + K PP +LI V GVGYEV PM+ FY + E G E ++ TH VREDA LL Sbjct: 1 MIGFLSGTLHAKLPPQILINVNGVGYEVEAPMSTFYAIGEVGDEVMLLTHMHVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ ER+LFKELIK NG+G K+A+ ILS MS FV V+ + AL K+PG+GKKT Sbjct: 61 FGFASELERSLFKELIKVNGIGAKMAIGILSAMSVNDFVGLVDVGDAPALTKIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++EM+DR KG ++++ + S A + + AV AL++LGYK +A +M Sbjct: 121 AERLVIEMRDRLKGWGNG---ASSNVSSKTMVSSAPHNQKASAVEALISLGYKTAQADKM 177 Query: 181 VSKIARPDASSETLIREALRA 201 V + S E I++AL++ Sbjct: 178 VQAV-ESGLSLEETIKKALQS 197 >UniRef50_Q21HN5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Gammaproteobacteria RepID=RUVA_SACD2 Length = 207 Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/213 (48%), Positives = 140/213 (65%), Gaps = 16/213 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL GI+ EK+ P +LI++GGVGY+V PMT FY LP G++A++ THF V E +Q L Sbjct: 1 MIGRLTGILAEKKAPHLLIDIGGVGYDVIAPMTTFYRLPALGEKAVLHTHFSVSETSQQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+++Q+R LF+ LIK NGVGPKLA+ I+S M + F V + ALVKLPG+GKKT Sbjct: 61 FGFSSQQDRELFRMLIKVNGVGPKLAVGIMS-MESSDFAKCVLDGNLTALVKLPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPA--------ADLVLTSPASPATDDAEQEAVAALVALGY 172 AERL+V+M+DR K L TP+ A +V P T+ +A +AL+ LGY Sbjct: 120 AERLLVDMRDRVKALD---TTPSEHSPTGEGAGIVRVDPVI-NTNVIIADAESALIGLGY 175 Query: 173 KPQEASRMVSKIARPD--ASSETLIREALRAAL 203 KP EA++ VS A D +SE LIR AL+ + Sbjct: 176 KPTEAAKAVSA-AYNDTITTSEDLIRAALKGMI 207 >UniRef50_B6BW72 Holliday junction DNA helicase RuvA n=1 Tax=beta proteobacterium KB13 RepID=B6BW72_9PROT Length = 189 Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 89/200 (44%), Positives = 131/200 (65%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG +RGI+I++ PP V ++ GG+GYE+ +PM+ +Y LPE + + H VVREDAQLL Sbjct: 1 MIGSIRGILIDRSPPWVQVDCGGIGYEIEVPMSTYYHLPELQSDIFLHVHMVVREDAQLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E++ FK LIK NG+G K+AL+ILSG+S QF NA+E+++V LVK+PGIG+KT Sbjct: 61 FGFLTKEEKSSFKSLIKINGIGAKVALSILSGVSMDQFSNAIEQQDVSLLVKIPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE+KD+ DL L + + + + + AL ALGY + ++ Sbjct: 121 AERLIVELKDK------------QDLKLQQSSQHSKNLT--DIMDALEALGYSKSDIQKV 166 Query: 181 VSKIARPDASSETLIREALR 200 + K D + I++AL+ Sbjct: 167 I-KNFNEDINVNEGIKQALQ 185 >UniRef50_Q6F992 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Acinetobacter sp. ADP1 RepID=RUVA_ACIAD Length = 201 Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 87/203 (42%), Positives = 134/203 (66%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + P VL+ V GVGYE+ P++ F +L + GQ ++TH VVREDAQ L Sbjct: 1 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQL-QKGQHVTLWTHLVVREDAQQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + QE+ +F+ L+K NGVGPK+AL ILS +S + F++ +E +++ L+K+PG+G+KT Sbjct: 60 YGFIDAQEKLIFRTLLKVNGVGPKMALGILSTLSIELFIHTIEHDDINTLIKVPGVGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++DRFK L T + V ++ +++ EA AAL +LGYKP EA + Sbjct: 120 AERLMIELRDRFKALSVQATTGST--VTSAQIQFSSNSPIAEAEAALQSLGYKPIEAQKA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ + + LIR AL++ + Sbjct: 178 IAAVKADYTEAADLIRAALKSMM 200 >UniRef50_B7GYB6 Holliday junction ATP-dependent DNA helicase ruvA n=16 Tax=Acinetobacter RepID=RUVA_ACIB3 Length = 199 Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 95/207 (45%), Positives = 135/207 (65%), Gaps = 13/207 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + P VL+ V GVGYE+ P++ F +L + GQ+ ++TH VVREDAQ L Sbjct: 1 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQL-QKGQKVTLWTHLVVREDAQQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ QE+T+F+ L+K NGVGPK+AL ILS +S + V+ +E ++V LVK+PG+GKKT Sbjct: 60 YGFSDAQEKTIFRTLLKVNGVGPKMALGILSTLSVELLVHTIEHDDVNTLVKVPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAA----DLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 AERL++E++DRFK L + AA V SP + EA AAL +LGYKP E Sbjct: 120 AERLMIELRDRFKTLAQGTSSAAALPQIQFVSNSPVA--------EAEAALQSLGYKPLE 171 Query: 177 ASRMVSKIARPDASSETLIREALRAAL 203 A + V+ + S +IR AL++ + Sbjct: 172 AQKAVAAVKADYTESADIIRAALKSMM 198 >UniRef50_A4IY85 Holliday junction ATP-dependent DNA helicase ruvA n=18 Tax=Francisella RepID=RUVA_FRATW Length = 216 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 140/213 (65%), Gaps = 11/213 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++IEK P +LI+V G+GYEV +PMT FY L + + ++THF+VREDAQ L Sbjct: 1 MISFIKGVLIEKDPTALLIDVNGIGYEVFVPMTTFYTLGDIDSQVSLYTHFIVREDAQQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K ++ +F+ELIK NG+G + A+AILSGM ++ ++ +E ++ L +PGIGKKT Sbjct: 61 YGFKSKVDKKVFQELIKVNGIGARTAIAILSGMDSKTLLHCIENKDYALLATVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA---------TDDAEQEAVAALVALG 171 AERL+VE+ D+ + +++ + TS S A + E+V AL+ALG Sbjct: 121 AERLVVEIYDKLLKMANEIYAQTSGTTTTSQDSQAQQAPTSVVLANSIFNESVDALLALG 180 Query: 172 YKPQEASRMVSKIARPDASSET-LIREALRAAL 203 YK ++A +M ++ A DA++ +IR+AL+ ++ Sbjct: 181 YKQKDAEKM-ARSAMGDATTAAEVIRKALQGSI 212 >UniRef50_Q5P2U6 Holliday junction ATP-dependent DNA helicase ruvA n=102 Tax=Proteobacteria RepID=RUVA_AZOSE Length = 199 Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 87/201 (43%), Positives = 128/201 (63%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ GI++EK PP ++++ GVGYE+ +PM+ FY LP G+ +FTH +RED L Sbjct: 1 MIGRITGILLEKNPPQIVVDTHGVGYEIDVPMSTFYGLPATGESLSLFTHLAIREDGHFL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F++L+K +G+G + AL++LSG+S AV +E G LVK+PGIGKKT Sbjct: 61 YGFASADERAAFRQLLKVSGIGARTALSVLSGLSVSDLAQAVALQETGRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERL++E++D+ + L G A V + A PA D+ + + AL+ALGY +EA Sbjct: 121 AERLLLELRDKLGRALPGF----GASTVPGAAAQPA--DSRSDILNALLALGYSDKEAQS 174 Query: 180 MVSKIARPDASSETLIREALR 200 + I P+ IR+AL+ Sbjct: 175 ALKAIP-PETGVSDGIRQALK 194 >UniRef50_C1SHM7 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHM7_9BACT Length = 192 Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/200 (44%), Positives = 126/200 (63%), Gaps = 12/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGI+IEK P +I+ G V +E+ + + + +LPE GQ+A V+THFV+RED L Sbjct: 1 MIYSVRGILIEKNPANAVIDTGAVAFEMSISASTYQQLPETGQKAHVYTHFVMREDGVYL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E+ LF LI + VGPKLALAILSGM +F+NAV E+G + +PGIGKKT Sbjct: 61 YGFSKMEEKKLFLLLITISKVGPKLALAILSGMDVNKFMNAVMNSEIGLISTIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+F G + D P AE + V+AL+ LGY + + Sbjct: 121 AERIVVELRDKF----GSMSVSTGD-------EPVAGGAE-DVVSALLNLGYSRADCQKA 168 Query: 181 VSKIARPDASSETLIREALR 200 V+KI + D+ E L + AL+ Sbjct: 169 VNKIYKTDSGFEELFKGALK 188 >UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Xanthomonadaceae RepID=RUVA_STRM5 Length = 197 Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 88/203 (43%), Positives = 133/203 (65%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRGI+ K PP ++++V GVGYE+ PM+ FY+LPE G+E ++TH+ +ED+ L Sbjct: 1 MIGRLRGIVAYKAPPWLVVDVNGVGYELEAPMSTFYDLPELGREVTLYTHYSQKEDSVSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LF+++ K +G+G K+ALA+LSG++ ++F V+ ++ AL ++PGIGKKT Sbjct: 61 YGFLREGERRLFRDVQKVSGIGAKIALAVLSGVTVEEFARMVQAGDITALTRIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E++DR A L + + PA D +A AL LGYKP EA+RM Sbjct: 121 AERMVLELRDRAAQF-------GAGGALPTGSGPAPADPLSDATVALQQLGYKPAEAARM 173 Query: 181 VSKIARPDASSETLIREALRAAL 203 + +IR+AL++AL Sbjct: 174 AREAFNEGDEVAIVIRKALQSAL 196 >UniRef50_C4KD09 Holliday junction DNA helicase RuvA n=12 Tax=Bacteria RepID=C4KD09_THASP Length = 200 Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 127/201 (63%), Gaps = 5/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ G ++EK PP +L++ GVGYE+ +PM+ FY LP G + THFVVRED L Sbjct: 1 MIGRITGTLLEKNPPQILVDAHGVGYEIDVPMSTFYNLPATGGTVSLHTHFVVREDGHFL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ER F++L+K +GVG ++ALA+LSG+S AV +E G LVK+PGIGKKT Sbjct: 61 FGFATEEERATFRQLLKVSGVGARMALAVLSGLSVNDLAQAVALQEAGRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++D+ G L + A A DA+ + + AL+ALGY +EA Sbjct: 121 AERLLLELRDKL----GKALPSMTGARLAAAAPGAAPDAKSDILNALLALGYNEREALSA 176 Query: 181 VSKIARPDASSETLIREALRA 201 + +A D IR+AL+A Sbjct: 177 MKGLAE-DVGVSDGIRQALKA 196 >UniRef50_A5CX58 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=A5CX58_VESOH Length = 202 Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 128/200 (64%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G I+EK PP +L+EV +GYE+ M+ FY + + Q ++ +TH ++E+A +L Sbjct: 3 MIGKLSGTILEKNPPEILLEVDKIGYEILCSMSSFYAMGDEEQLSL-YTHLSIKENAHIL 61 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K E+TLF+ELI+ NG+GPK+ALAILS + + + L K PGIG KT Sbjct: 62 YGFISKDEKTLFRELIRINGIGPKVALAILSHLDINSLIKVITDGNDTLLAKTPGIGIKT 121 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++LIVE+KDR + L + ++ + +P ++A AAL ALG+K +E+ +M Sbjct: 122 AQKLIVELKDRLEKLKLN-NENHKNIHIKFKKNPNI----KQASAALQALGFKARESEKM 176 Query: 181 VSKIARPDASSETLIREALR 200 +S I S++ LIR+AL+ Sbjct: 177 LSVIKDNSLSTKALIRQALQ 196 >UniRef50_B9ZJ99 Holliday junction DNA helicase RuvA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJ99_9GAMM Length = 201 Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/203 (40%), Positives = 123/203 (60%), Gaps = 4/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL G +I ++ V+I+ GGVGYEV +P++ LPE G ++ TH VVREDA L Sbjct: 1 MIARLEGTLISREVNGVVIDAGGVGYEVEVPLSTLAALPEPGATVVLTTHLVVREDAHQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K++R LF+ LI+ NG+G KLALA+LS + + + +V L K+PGIGK+T Sbjct: 61 FGFMHKRDRDLFRRLIRVNGIGAKLALAMLSTYAGDELAGLISGGDVTGLAKVPGIGKRT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+ +R + AD P + + EA+AAL +LGY A +M Sbjct: 121 AERVVLELGERLAEMGFAAAPGGADAGADIPGAA----MDGEALAALESLGYPRASAEKM 176 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ + S E+L+R ALRA + Sbjct: 177 VAAVRDQADSVESLVRLALRATV 199 >UniRef50_A5EXH7 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RUVA_DICNV Length = 204 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/202 (42%), Positives = 120/202 (59%), Gaps = 9/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G ++ KQ +LI V GVGYE+ +P + + G+E VF H V RED Q L Sbjct: 1 MIGWLQGRVLYKQNDQLLINVCGVGYELTVPQSVMAS-AQVGEELTVFVHHVQREDGQFL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ +R LF+ELI+ +G+GPKL++ ILSG++ + + AV +E ++L GIGKKT Sbjct: 60 YGFSSFLQRQLFRELIRVSGIGPKLSIVILSGLTPEALIAAVRAQESAPFLRLSGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+ DR + DLF S +P A +EA+ AL+AL P EA Sbjct: 120 AERLLIELHDRVE--KNDLFLCDES---ESSRAPIALSASEEAIQALIALELAPAEAELW 174 Query: 181 VSKIARP---DASSETLIREAL 199 V K + DA S LI+ A Sbjct: 175 VKKAQKTLAEDADSAALIKTAF 196 >UniRef50_Q2LRA9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Syntrophus aciditrophicus SB RepID=RUVA_SYNAS Length = 204 Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 131/205 (63%), Gaps = 10/205 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++RG +I K +V+I+ G+GYEV +P++ +YELP+ G E +F + ++D+ LL Sbjct: 1 MIAQIRGKLILKTVSMVIIDNHGIGYEVMIPLSTYYELPDVGSEVSLFVYTFFKQDSILL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF + E+ LFK +I +G+GP+LA+ +LSG+++ + ++A+ ++ L+K+PG+G+K Sbjct: 61 VGFCTENEKQLFKLMISVSGIGPRLAVNVLSGINSSELIHAIANNDLNRLLKVPGLGRKM 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA--EQEAVAALVALGYKPQEAS 178 A+R+I+E++D+ G +T + + A D + E++A++AL+ LGYK Q A Sbjct: 121 AQRVILELRDKVSG-----WTSKEQITFINNKKDAIDQSVMEEDAISALINLGYKSQAAK 175 Query: 179 RMVSKIAR---PDASSETLIREALR 200 + ++ + S + ++++AL+ Sbjct: 176 DAIDRVISEGGENKSLDVILKKALK 200 >UniRef50_C8W4C8 Holliday junction DNA helicase RuvA n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4C8_DESAS Length = 203 Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 130/205 (63%), Gaps = 13/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I+ + V+++V GVGY + +P +C +LP AG+E ++ T+ V+ED+ L Sbjct: 1 MIAFLRGKIVFIEANSVVLDVSGVGYRIFVPASCQSKLPAAGEEMLLLTYLSVKEDSLQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +QER LF L+ G+GPK AL++LS +S Q AV RE++ A++K+PGIGKKT Sbjct: 61 YGFIEQQERELFVMLLNVGGIGPKGALSVLSCLSPAQLYLAVAREDIKAVMKVPGIGKKT 120 Query: 121 AERLIVEMKDRFKG--LHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+RLI+E+KD+ KG G+ TP S + ++AE +A+ AL ALGY EA Sbjct: 121 AQRLILELKDKLKGRVQPGEETTP-------ETVSGSQNEAE-DALFALEALGYSVSEAI 172 Query: 179 RMVSKIARPDA---SSETLIREALR 200 +V ++ R + S+ L++ AL+ Sbjct: 173 VVVQEVLRSSSKNISASELLKNALQ 197 >UniRef50_B5JGR2 Holliday junction DNA helicase RuvA n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGR2_9BACT Length = 205 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ P +I GG+GY VH+P++ +LP G+ + TH V RED+Q L Sbjct: 1 MIVSIEGILERATPLTAIINAGGLGYLVHIPVSTAAKLPANGETVKLHTHAVYREDSQSL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF ++ ER F+ LI K +GVGPK+A+ ++S + ++A+ + L K PGIGKK Sbjct: 61 YGFASEDERNFFQLLIEKVSGVGPKVAIGMMSKLELPSLISAIGNADAVLLAKTPGIGKK 120 Query: 120 TAERLIVEMKDRFKGL-HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 TAER+++E+KD+ H P LV + A+ E +A+ AL+ALGYK +A+ Sbjct: 121 TAERVVIELKDKLGAFAHTSSANPLQGLVPGNTAAAGKVSHEDDAILALLALGYKQSDAA 180 Query: 179 RMVSKIAR---PDASSETLIREAL 199 + V K P+AS+E LI+ AL Sbjct: 181 KSVGKAVEALGPNASTEALIKAAL 204 >UniRef50_C2KW74 Possible crossover junction endonuclease RuvA n=1 Tax=Oribacterium sinus F0268 RepID=C2KW74_9FIRM Length = 199 Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 127/204 (62%), Gaps = 13/204 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ E + +++IE GG+GY V +P + F + P+ G+E ++ T+F VRED+Q L Sbjct: 1 MIRFIHGILREVKEDMLVIEAGGLGYGVRIPASVFDKAPKTGEEILLHTYFSVREDSQEL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++R F +L+ +G+GPK AL I S MS ++ ++A+ + + K PG+GKK+ Sbjct: 61 FGFWEERDRDFFIKLLSVSGIGPKTALGIFSCMSREELIHAIISNDSKKIQKAPGLGKKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLT---SPASPATDDAEQEAVAALVALGYKPQEA 177 AERLIVE++D+ P D+ + + + AT A +EAV ALV+LGY EA Sbjct: 121 AERLIVELRDK---------VPKEDITFSGEEAVETTATSVAVEEAVEALVSLGYSVMEA 171 Query: 178 SRMVSKI-ARPDASSETLIREALR 200 R + I A + ++E L+R +L+ Sbjct: 172 KRWIRSIPAYEEKTAEELLRISLK 195 >UniRef50_A8S4H4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4H4_9CLOT Length = 209 Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 128/204 (62%), Gaps = 4/204 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ + ++++E G VG +H+P++ ELP G+E V+T+F VREDA L Sbjct: 1 MISYVKGPLMAIEEDVIVVEAGHVGLAIHVPVSLLPELPGMGKEVTVYTYFQVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + Q+R +F++L+ NG+GPK AL ILS + A+ E+V AL K PGIG KT Sbjct: 61 YGFLHSQDRDMFRQLLGVNGIGPKGALGILSVLRPDDLRLAIVSEDVKALAKAPGIGNKT 120 Query: 121 AERLIVEMKDRFK--GLHGDLFTPAADLVLTSPASPA-TDDAEQEAVAALVALGYKPQEA 177 A+RLI+++KD+ + G++ A + AS A +A +EAV ALVALGY EA Sbjct: 121 AQRLILDLKDKISMDDVLGNMAGGAGMGAADTGASVAGLVEAAKEAVQALVALGYTNTEA 180 Query: 178 SRMVSKIARPDA-SSETLIREALR 200 SR V ++ D +SE +++ +L+ Sbjct: 181 SRAVKQVEVTDGMTSEDVLKASLK 204 >UniRef50_B9XLI7 Holliday junction DNA helicase RuvA n=3 Tax=Verrucomicrobia RepID=B9XLI7_9BACT Length = 201 Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 10/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++E P V ++V GVGYEV +P++ F +LP+ G E + TH +REDA +L Sbjct: 1 MINFLHGKLVEALPTQVTVDVNGVGYEVLIPLSSFDKLPQPGGEVKLLTHLAIREDAHVL 60 Query: 61 YGFNNKQERTLFKELIKT-NGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF ER +F+ L+ T G+GPKLAL ILSGM+ AV +V +L ++ G+GKK Sbjct: 61 YGFMTAGEREMFRLLMNTVTGIGPKLALNILSGMNVTMLRGAVSNGDVKSLSQISGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS- 178 TAER++VE+KD+ G G +A L+ P D +AV AL+ALG+K EA Sbjct: 121 TAERIVVELKDKM-GAAGAWEAASAQRSLSEP-----DQRVNDAVLALMALGFKQPEAHD 174 Query: 179 --RMVSKIARPDASSETLIREALR 200 R + A+ E L+R +L+ Sbjct: 175 TVRSAQVLLGQQATVEDLVRASLK 198 >UniRef50_B6GE75 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GE75_9ACTN Length = 208 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/203 (38%), Positives = 118/203 (58%), Gaps = 4/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L G + E P + +I+V GVG+E+ + T LP+ G + +++T VVRED+ L Sbjct: 1 MISQLHGTVAEATPSMAVIDVNGVGFELGISGTTAAGLPQVGGKVLLYTRMVVREDSCTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K ERT+F +L+ +GVG KLALAIL+ S Q V E+ + +PG+GKKT Sbjct: 61 FGFASKDERTMFDKLVAVSGVGAKLALAILTTFSVPQLYAVVMAEDDKGMATVPGVGKKT 120 Query: 121 AERLIVEMKDRF---KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 A+RLI+E+K F + L G + L L A P +A +A AAL+++G+ P E Sbjct: 121 AQRLILELKGAFSKDRSLAGSAVAASIPLPL-DVARPVAPNAMDDASAALLSMGFTPAEV 179 Query: 178 SRMVSKIARPDASSETLIREALR 200 S +S D E L+ AL+ Sbjct: 180 SLALSGYDGADMRVEDLLAAALK 202 >UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veillonella RepID=D1BLL7_VEIPT Length = 202 Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 116/200 (58%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG +RGI+ ++V GVGY V++P T +L E G EA +FT+ VREDA L Sbjct: 1 MIGYVRGIVTHLFKESCYVDVHGVGYRVYVPTTTRQQLTE-GHEATLFTYLNVREDAMQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF LI +G+GPK+ L ILSGM+ + F A+ +V L KLPGIGKK+ Sbjct: 60 YGFWTEEEYELFILLISVSGIGPKVGLGILSGMTPEAFKLAIINGQVQQLTKLPGIGKKS 119 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERL++E+KD+ K H +PAA P A EA+ ALV+LGY ++ + Sbjct: 120 AERLVLELKDKIAKMTHISAESPAA----IQPIGVTASGAAGEAIEALVSLGYSERDVAD 175 Query: 180 MVSKIARPDASSETLIREAL 199 +V + LI+ +L Sbjct: 176 IVESLDDGKRDVSELIKVSL 195 >UniRef50_C6JAH0 Holliday junction DNA helicase RuvA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAH0_9FIRM Length = 202 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 16/208 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G+ ++ V++E GG+GYE++M E+ G++ V T+F VREDA L Sbjct: 1 MIAFVHGMAVDMTESSVVVEAGGIGYEIYMTGADLSEI-RMGEDVKVHTYFSVREDAMKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K + +FK L+ NGVGPK AL +L+G++A + A+ ++V L K PGIGKKT Sbjct: 60 YGFRAKDDLQMFKLLLGVNGVGPKAALGVLAGITADELRFAILSDDVKTLSKAPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA------TDDAEQEAVAALVALGYKP 174 A++LI+E+KD+ K A +L L A D QEAV ALVALGY Sbjct: 120 AQKLILELKDKMK------LEDAFELKLVHEQERAAVGAGEVSDGRQEAVEALVALGYSS 173 Query: 175 QEASRMVSKIA--RPDASSETLIREALR 200 +A R V K+ PD E L++ AL+ Sbjct: 174 ADALRAVRKVTDVSPD-DVEGLLKAALK 200 >UniRef50_Q1Q054 Strongly similar to DNA helicase RuvA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q054_9BACT Length = 196 Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 122/204 (59%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ +RG +I K P +++EV GVGY +H+P++ F ++P G E + T +RED L Sbjct: 1 MLDYIRGQVISKSPTKLVLEVAGVGYLLHIPISTFEKIPSRG-EVTIHTQLFLREDGIKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +ER LF+ L+ NGVGP +A+AILSG +A A+ RE+ AL+++ G+GKKT Sbjct: 60 FGFASDEERGLFQLLLSVNGVGPTMAIAILSGSTANDIKCAIAREDTKALMRIKGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGY-KP---QE 176 AER+++E+K+ KG + D+ + DD A+ AL++LGY +P Sbjct: 120 AERIVLELKESVKGAKASI-----DIEMDGRQRAFADD----AIMALISLGYGRPVAENA 170 Query: 177 ASRMVSKIARPDASSETLIREALR 200 V K+ D + E L+REAL+ Sbjct: 171 VKEAVKKLNSVD-NIEVLVREALK 193 >UniRef50_C0GKF3 Holliday junction DNA helicase RuvA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKF3_9FIRM Length = 200 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 7/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG +++K V+++ G+G+++ +P T L +E +FT+ VRED L Sbjct: 1 MFNYIRGTLVQKGKDTVVLDNQGIGWQISVPSTVLSGLHSLDEEVKLFTYLAVREDDLHL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +LFK LI +G+GPK AL ILS +SA +F AV E V AL ++PG+G K+ Sbjct: 61 YGFLTADDLSLFKLLISVSGIGPKAALGILSSLSAAEFHLAVMHENVKALTRVPGVGPKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+K++ L TP V +P + T A +A+ ALVALGY EA Sbjct: 121 AKRLIVELKEKVAALG----TPQT--VSATPQAGGTTSAYHDALEALVALGYNGSEAQAA 174 Query: 181 VSKIARPD-ASSETLIREAL 199 + I D S+E LI++AL Sbjct: 175 LQTIEDADRLSTEELIKKAL 194 >UniRef50_A5WFC8 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Moraxellaceae RepID=RUVA_PSYWF Length = 210 Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 120/202 (59%), Gaps = 6/202 (2%) Query: 1 MIGRLRGIIIEKQPPL-VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG + G + P+ L+ GVGYEV +P+ F +L A ++TH VREDAQL Sbjct: 1 MIGLIEGRVCHLSAPVACLMTASGVGYEVELPLPDFCQLQLEAM-ASLWTHLHVREDAQL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F++LI+ NGVG K+ALA++S SA + + ++ E AL ++PGIGKK Sbjct: 60 LYGFLHPTERDVFRQLIRVNGVGAKMALAMMSTFSATELKHCIDTENDAALTRVPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGD--LFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 TA+RL++E+K +F + D L T + + S AE E +AL++LGY+ +EA Sbjct: 120 TAQRLLIELKGKFDHIQSDMSLLTEVEQQIGIAANSEGVILAEVE--SALISLGYRDKEA 177 Query: 178 SRMVSKIARPDASSETLIREAL 199 + + DA + + ++L Sbjct: 178 QQAIKAARETDAGQQLVDTQSL 199 >UniRef50_A3DBU3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Clostridium RepID=RUVA_CLOTH Length = 202 Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 118/202 (58%), Gaps = 7/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG + K +++E GVGY + ++ + E GQE V+T+ VRED L Sbjct: 1 MFAYIRGRLEYKNNDFLIVESNGVGYRIFTSLSTISGIGEIGQEVKVYTYLYVREDVISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E +F+ LI +GVGPK A+++LS +S +F AV ++V L K GIGKK Sbjct: 61 YGFLTQEELNVFELLISVSGVGPKAAVSVLSAISPSRFSLAVITDDVKTLTKAQGIGKKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAAD--LVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+R+I+E+KD+ K + + + VL + +S EAV+AL+ LGY P EA+ Sbjct: 121 AQRIILELKDKIKKEQLTEYAQSEEGGKVLDTDSSKMA-----EAVSALMVLGYSPAEAN 175 Query: 179 RMVSKIARPDASSETLIREALR 200 + VS + R D ET+I+ AL+ Sbjct: 176 KAVSAVYREDMDIETIIKNALK 197 >UniRef50_B5EAH2 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Deltaproteobacteria RepID=RUVA_GEOBB Length = 199 Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 118/201 (58%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + K P ++++V GVGY+VH+P + +Y LP G + H V+EDA L Sbjct: 1 MIALLTGKLAYKSPEFIILDVNGVGYQVHIPFSTYYTLPVEGGALSLQIHTSVKEDAINL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +QE+ LF+ LI +GVGPKLA ILS + +++ + L +PGIGKKT Sbjct: 61 YGFRTQQEKELFQLLIGVSGVGPKLATGILSNSEPSELADSLVNGNLARLSAIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+K++ K L L P A +PA + + ++AL+ LGYK + Sbjct: 121 AERLVLELKEKMKKL--GLAQPQAG----GTTAPAKQEIRDDVLSALINLGYKEAVVQKA 174 Query: 181 VSKI-ARPDASSETLIREALR 200 ++++ DA+ E ++++AL+ Sbjct: 175 LAELKVTEDATVELVLKQALK 195 >UniRef50_A9GQJ8 Holliday junction DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQJ8_SORC5 Length = 244 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/210 (40%), Positives = 127/210 (60%), Gaps = 18/210 (8%) Query: 1 MIGRLRGIIIEK-QPPLVLIEVGGVGYEVHMPMTCFYEL------PEAGQEAI-VFTHFV 52 +IGRL G ++E+ V+++V GVGYEV +P+ +AG +AI +F H Sbjct: 37 LIGRLSGHVVEEGDEGTVVLDVSGVGYEVTVPLGAVGRARGIAANAKAGSDAITLFVHTH 96 Query: 53 VREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVK 112 VREDA LLYGF +++R F+ LI + +GPK+A+AILS + A + + R E L Sbjct: 97 VREDALLLYGFATREDRAAFRVLIGISSIGPKIAMAILSALGAGELAAVITRRETARLTA 156 Query: 113 LPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAV-AALVALG 171 +PG+GKKTAERL++E+KD+ L +PAA SP P A+Q+ + +AL +G Sbjct: 157 IPGVGKKTAERLVLELKDKLVHLPAAPLSPAA-----SP--PVATGAKQDLLHSALTRMG 209 Query: 172 YKPQEASRMVSKI-ARPDASS-ETLIREAL 199 Y+P EA R V+ + AR D++ L+R+AL Sbjct: 210 YRPAEAERAVTALGARVDSAPLGDLVRDAL 239 >UniRef50_A6DHC9 Holliday junction DNA helicase motor protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHC9_9BACT Length = 206 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 10/207 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++E + +I+VGGVGY V +PM+ + LP+ G + H VREDA L Sbjct: 1 MIAHLKGQLVELELSNAVIDVGGVGYYVDIPMSTYDRLPKVGSPVALRIHMTVREDAMNL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER+ F+ + +G+GPK+ALA LS + + F A++ + L K+ G+GK+ Sbjct: 61 YGFATDEERSFFRMITSVSGIGPKIALAALSALPTETFCEAIQEGNIKLLSKISGVGKRM 120 Query: 121 AERLIVEMKDRFK--GLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 AER++VE++D+ G+ AD +++ A +D ++ AL ALGY+P Sbjct: 121 AERMVVELRDKVGALGMTSAFVAKVADDDMSAQDKEAFND----SIMALEALGYRPDTIR 176 Query: 179 RMVSKI----ARPDASSETLIREALRA 201 + V I + SSE +I+ AL A Sbjct: 177 KTVKTIFDGLSPAQRSSENIIKAALSA 203 >UniRef50_C9KK52 Holliday junction DNA helicase RuvA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK52_9FIRM Length = 199 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 80/203 (39%), Positives = 123/203 (60%), Gaps = 10/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G +I L++V GVGY V + + +L +EA +FT+ VREDA +L Sbjct: 1 MIGYLHGRVIALYTDYCLLDVHGVGYRVFLANSTRAKL-RLKEEASLFTYTSVREDAIVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF +LI +G+GPK+AL ILS ++ + A++ ++ L KLPGIGKK+ Sbjct: 60 YGFATEEEYELFLQLIGVSGIGPKVALGILSAITVESLCRAIQNKQASVLTKLPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAA--DLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 AERLI+E+KD+ F + +L+ + DDA EA+AAL +LGY E + Sbjct: 120 AERLILELKDKVA------FADSGEEELLTIENEAEVGDDAVAEAMAALQSLGYTQAEIA 173 Query: 179 RMVSKIARPDASSETLIREALRA 201 ++ K A+ ++E +I+E+L+A Sbjct: 174 PVIRKTAKYK-TTEAIIKESLKA 195 >UniRef50_B3QVA9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RUVA_CHLT3 Length = 200 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 14/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ L G +IEK +++EV GVGY +++ T +LP G + + T+ VREDA L Sbjct: 1 MLSYLSGTLIEKFSTEIVVEVNGVGYLLNISATTHEKLPAIGNQIKILTYLYVREDALQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++R +FK LI +GVGPKLA ILSGMS Q +V + AL + G+GKKT Sbjct: 61 YGFITTEDREVFKLLIAISGVGPKLAQTILSGMSTAQLRESVIAGDTKALTAIAGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQ---EAVAALVALGYKPQEA 177 AER+I+E+KD+ L DL + + D +Q +A +AL++LG+ A Sbjct: 121 AERIILELKDKLVKL---------DLKIDIKETAFRSDKQQVRNDAYSALISLGFTKSIA 171 Query: 178 SR-MVSKIAR-PDASSETLIREALR 200 + M + IA PD S + LIR ALR Sbjct: 172 EKAMRAAIAEVPDGSVDDLIRVALR 196 >UniRef50_A0L4V9 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Proteobacteria RepID=RUVA_MAGSM Length = 204 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 121/204 (59%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G + K P V+++V GVGY V + + + ELP G+ +++T VREDA LL Sbjct: 1 MIAQLKGSLAAKHPDHVVMDVHGVGYRVFISLATYNELPTVGEACLLYTVTHVREDAFLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+++ +R +F L NG+G KLALA LS + + + A+ RE++ L +PG+GKKT Sbjct: 61 YGFHSESQRKVFNLLTSVNGIGTKLALAALSSHTPEALLTALSREDLTLLCTIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADL-VLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+R+ +E+KD+ L + P + T A+PA +E +AL+ LGYKP + Sbjct: 121 AQRMAMELKDKLGAL--PMAAPTTAIGAATMAANPA--GLREEVASALLNLGYKPPQVDA 176 Query: 180 MVSKIARPDASSETLIREALRAAL 203 ++K+ A T I AL+ AL Sbjct: 177 ALAKLF--SAGEITDISVALKGAL 198 >UniRef50_A4J536 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RUVA_DESRM Length = 199 Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 11/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++ P V+I+V G+GY V +P T +LP G E +FTH VRED Sbjct: 1 MIAYIKGLLAADGPGWVVIDVNGIGYHVSIPSTT--QLPALGHEVKLFTHMSVREDGIQF 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ F L+ GVGPK+ALA++S + +A+ E+V LVK+PG+GKKT Sbjct: 59 FGFAKEDEKECFLLLLNVAGVGPKVALAVVSHLPPSNLRSAIAIEDVNQLVKVPGVGKKT 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ KG+ AA T S T + EAV AL+ALGY EA Sbjct: 119 AQRILLELKDKLKGM-------AAVEHSTLQQSVITTGSGDEAVEALLALGYSQGEARDA 171 Query: 181 VSKIAR--PDASSETLIREALR 200 V K + P+ LI+ AL+ Sbjct: 172 VKKAQKSAPEEDLSALIKIALK 193 >UniRef50_D0J979 Holliday junction DNA helicase motor protein n=2 Tax=Blattabacterium RepID=D0J979_BLASP Length = 202 Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 122/212 (57%), Gaps = 24/212 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI LRG +IEK ++I+ GVGY +H+ + L E G+E ++T+ ++E+ + Sbjct: 1 MITHLRGKLIEKNQSSLIIDCNGVGYYLHISSYTYSSLLEEEGKEISIYTYLFIKENQHV 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F LI NG+GP A+ ILS ++ + ++ RE++ ++ GIGKK Sbjct: 61 LYGFFERIERKIFSHLISVNGIGPSSAITILSSLTPHEIKESISREDIEVFNQVKGIGKK 120 Query: 120 TAERLIVEMKDRF---------KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVAL 170 TA+R+I+E+KD+ KG + + F + ++EA++AL+ L Sbjct: 121 TAQRIIIELKDKISISPSTIPKKGKNVNFFDKPPIFI------------KKEALSALIVL 168 Query: 171 GYKPQEASRMVSKI--ARPDASSETLIREALR 200 G+ P+E+ +++ +I P+ + E LI+E+L+ Sbjct: 169 GFSPKESKKVLEEILDKNPEFTVENLIKESLK 200 >UniRef50_A4EAI5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI5_9ACTN Length = 206 Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 113/200 (56%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L G ++E +++V GVG+E+ + + LP G E ++T VREDA L Sbjct: 1 MISQLHGTLVEATMSSAVVDVSGVGFELGISGSTAATLPTPGGEVRLYTRMQVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K ERT+F L+ +GVGP+LALA+LS + Q + V E+ + K+PG+GKKT Sbjct: 61 FGFASKDERTMFDRLVSVSGVGPRLALAVLSTYTVGQLYSLVMAEDDKGMAKVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K F G + A + P A A +A AAL+++G+ PQE Sbjct: 121 AQRLILELKSTFAKDKGFVPVDAIPGQVAMPVPAAAPSAIDDARAALLSMGFSPQETDVA 180 Query: 181 VSKIARPDASSETLIREALR 200 +S D E L+ AL+ Sbjct: 181 LSGYDGQDMRVEDLLGAALK 200 >UniRef50_A9KNV9 Holliday junction ATP-dependent DNA helicase ruvA n=35 Tax=Bacteria RepID=RUVA_CLOPH Length = 203 Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G + E + V+++ G+GYE+ +P T LP G + T+ VRED L Sbjct: 1 MLAFIQGELAEVKENYVVVDNNGMGYEIFIPHTVHSYLPAIGDKVKFHTYLQVREDGMAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF N+++ +FK LI NG+GPK A+ ILS +S AV E+V A+ K PGIG KT Sbjct: 61 FGFLNREDLAMFKLLITVNGIGPKGAIGILSAISTDDLRFAVLAEDVKAISKAPGIGTKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +LI+E+KD+FK T ++ V+++ D +EA+ ALVALGY +A + Sbjct: 121 ASKLILELKDKFKLEDAFEATFQSNQVISTGGKGNNDGIREEAIQALVALGYSATDALKA 180 Query: 181 VSKI-ARPDASSETLIREALR 200 V + + +SE +++ +LR Sbjct: 181 VKAVEITSNMTSEDVLKFSLR 201 >UniRef50_B1ZN17 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Opitutus terrae PB90-1 RepID=RUVA_OPITP Length = 200 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 12/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ P ++EV G GYEVH+P+T LP AG + T + RED+Q L Sbjct: 1 MITSIQGTLVSATPLQAIVEVAGFGYEVHIPVTTAERLPAAGAAVKLHTLVIYREDSQTL 60 Query: 61 YGFNNKQERTLFKELIK-TNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF + ER F+ +I+ GVGPK+AL+I+S ++ +A+ +V +L K PGIGKK Sbjct: 61 YGFASPAERDFFRLMIEHVTGVGPKMALSIMSRLALPSLESAIRMGDVASLAKCPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLT--SPASPATDDAEQEAVAALVALGYKP--- 174 TAERL+VE++ + T AA + T + A+ A ++AVAALVALGY+ Sbjct: 121 TAERLVVELRTKVGA------TGAAPGLATQPAAAASPGASAHRDAVAALVALGYRSADA 174 Query: 175 QEASRMVSKIARPDASSETLIREAL 199 EA R S A++E+LI++AL Sbjct: 175 DEAVRRASLALGEAATTESLIKKAL 199 >UniRef50_C1A615 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RUVA_GEMAT Length = 197 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 118/202 (58%), Gaps = 14/202 (6%) Query: 1 MIGRLRGIIIEKQPPLV-LIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI ++RG I+ ++ V ++ GV YE +P++ F LP GQ + TH VVREDA Sbjct: 1 MISQVRGTIMHRELDRVEIMTASGVAYECLIPLSVFESLPSEGQTVTLHTHLVVREDAWH 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F++L+ GVGP LAL ILS ++ + V A+ ++V L+++P +G+K Sbjct: 61 LYGFAHAYERAVFQKLLHAKGVGPALALGILSALTPDRVVRALHEKDVLTLMRVPRVGRK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AE++I+++ D+ D PA T+P SP DD AV AL+ALGY EA R Sbjct: 121 KAEQIILDLADKI-----DAVGPAP-ATGTAP-SPLGDD----AVRALIALGYNQTEADR 169 Query: 180 MVSKIARPDASSE--TLIREAL 199 V + A + +L+R AL Sbjct: 170 AVRAVVESGAPKDVSSLVRGAL 191 >UniRef50_B1I477 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=RUVA_DESAP Length = 202 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 17/207 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++ P V++EVGG+GY V +P + LPE G+ ++T+ V+E A + Sbjct: 1 MIDFLKGRLVSVYPEAVVVEVGGIGYRVQVPPSLAASLPEPGETVFLYTYLSVKETALEM 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+++ +RT F L+ G+GP+ ALA++ + ++ A+ RE+ G L +PGIG K+ Sbjct: 61 FGFSSELDRTAFLLLLGVAGIGPRTALAVVGRLGTRRLWAAILREDTGILTTVPGIGVKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDD-------AEQEAVAALVALGYK 173 A R++VE++DR + V S PA+D AE EA+AAL++LGY Sbjct: 121 ARRIMVELRDRLEKQQ----------VAVSAELPASDGVPVLAGRAENEALAALISLGYT 170 Query: 174 PQEASRMVSKIARPDASSETLIREALR 200 P+EA ++++ + L+ ALR Sbjct: 171 PREAREALNRLPDRKLDAAGLVHAALR 197 >UniRef50_Q5I6C8 Holliday junction DNA helicase RuvA n=17 Tax=Bacteroidetes RepID=Q5I6C8_FLAJ1 Length = 193 Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 123/203 (60%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++EK P V+I+ GGVGY V++ + F +P A + +TH ++EDA L Sbjct: 1 MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNADFIKL-YTHLQIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ER +F+ L+ +G+G +A +LS + +Q +NA+ +VG + + GIG KT Sbjct: 60 YGFVEKSEREIFRMLLSVSGIGAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+++K++ L+ DL S T+ EA++AL LG+ + + ++ Sbjct: 120 AQRVILDLKEKVLKLY--------DLDEVSVVQNNTN--RDEALSALEVLGFVRKTSEKV 169 Query: 181 VSKIAR--PDASSETLIREALRA 201 V KI + P+A+ ET+I++AL++ Sbjct: 170 VEKIVKEDPEATVETIIKKALKS 192 >UniRef50_B2UKW6 Holliday junction DNA helicase RuvA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKW6_AKKM8 Length = 220 Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 121/205 (59%), Gaps = 14/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI LRG + E P ++++V GVGYEV +P++ F L P G+E + T+ VRE+ Q+ Sbjct: 24 MIAFLRGTVAESYPQRLILDVHGVGYEVIVPLSTFDRLNPLPGRELTLKTYLHVRENMQV 83 Query: 60 LYGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 LYGF ER +F LI + +G+GP A+AIL +S +QF AV +V + + G+GK Sbjct: 84 LYGFATDAERDIFLLLIERVSGIGPATAIAILGSLSVEQFKQAVVGGDVSGIARAKGVGK 143 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTAER+++E+KD+ GL + A AT A +A AL+ALG+K E+ Sbjct: 144 KTAERIVLELKDKV-GLAA---------TWEAQAQGATSQAAGDAELALIALGFKQVESR 193 Query: 179 RMVSKIAR--PDASSETLIREALRA 201 + ++ + PDA + LIR ALR+ Sbjct: 194 KAIAAHLKDHPDADVDELIRAALRS 218 >UniRef50_Q0W1R7 Holliday junction resolvasome, DNA-binding subunit n=2 Tax=Euryarchaeota RepID=Q0W1R7_UNCMA Length = 201 Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 13/206 (6%) Query: 1 MIGRLRGIIIEKQPP--LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE-DA 57 MI + G I K +V+IE GG+GYEVH+P +LP+ G++ ++ H RE D Sbjct: 1 MIAHIEGKIDAKSESEEVVVIEAGGIGYEVHVPTPVLDQLPQEGEDCKLYIHTNFREEDG 60 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 LYGF Q+R F+ L+ +G+GPK+ L I+SG + ++ A+ E++ L ++ G+G Sbjct: 61 TTLYGFATIQDRDFFRLLLTVSGIGPKVGLGIMSGATVEEIAEAIVTEDLKTLTRMNGVG 120 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KKTA+RL++E+KD+ L ++ + D A +AV ALVALGY Q A Sbjct: 121 KKTAQRLVLELKDKVAKLR---------IMHHAKKQVKGDTASADAVDALVALGYSRQVA 171 Query: 178 SRMVSKIARPDASSETLIREALRAAL 203 S V++ AR + ++ L+ E + A+L Sbjct: 172 SDAVAR-ARDNFTAPPLVNELVVASL 196 >UniRef50_Q30R94 Holliday junction ATP-dependent DNA helicase ruvA n=19 Tax=Campylobacterales RepID=RUVA_SULDN Length = 188 Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 17/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG+++ K+P V ++VGGV YEV + + F L +G E +FT V+REDAQLL Sbjct: 1 MIVGVRGVLVSKEPSFVHVDVGGVVYEVFISLQSFSAL--SGNEVKLFTSHVIREDAQLL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E+ LF+ LIK NGVGPK+A+AI S + QF + +++ A+ ++PGIG K+ Sbjct: 59 YGFLELGEKKLFERLIKINGVGPKVAMAICSTYTPSQFAVVLNNKDITAVQRVPGIGPKS 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE+ G +L A++ P S A A + AL +LG+K + S+ Sbjct: 119 AGRILVEL----SGFDTELIISASE-----PKSLAVAQASE----ALESLGFKKDKISKA 165 Query: 181 VSKIARPDASSETLIREALR 200 + + D + L++EAL+ Sbjct: 166 LGSCSAVDTA--ILVKEALK 183 >UniRef50_D2QMR9 Holliday junction DNA helicase RuvA n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QMR9_9SPHI Length = 198 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 14/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + K+ V+I+V GVGY VH+ + + LP G +F H + RED+Q L Sbjct: 1 MIAYLDGTLSHKEATHVIIDVHGVGYSVHISLQTYAVLPGGGDRIKLFIHHLFREDSQSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF N E++LF +LI +GVGP AL +LS M A+ E V A+ + GIG KT Sbjct: 61 YGFANADEKSLFLDLIGVSGVGPNTALGMLSAMQPGDLRLAILGENVRAVQAIKGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPA---SPATDDAEQEAVAALVALGYKPQEA 177 A+R+I+E++D+ K A +V P+ A + +E++AALVALG+ A Sbjct: 121 AQRIILELRDKMK---------RAGVVPDGPSYRQQAAANPVREESLAALVALGFPKPTA 171 Query: 178 SRMVSKI--ARPDASSETLIREALR 200 + V A P S E +IR ALR Sbjct: 172 EKSVDDALKADPALSVEDVIRRALR 196 >UniRef50_Q2S5C8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Rhodothermaceae RepID=RUVA_SALRD Length = 202 Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 119/204 (58%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G +++K L++V G+GY VH+P + + LP+ +E + T+ +RED + L Sbjct: 1 MIDYVSGTLVDKTTDSALVDVNGLGYRVHVPTSTYKRLPDTDEEVTLHTYHYLREDDESL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ERT+F+ + + VGPKLAL+ LS M+ + + V + L ++ G+G KT Sbjct: 61 YGFATKAERTVFETMTGVSRVGPKLALSALSAMTPTELRDHVMEGDKSRLTQISGVGTKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE++DR L D+ + L S S A +A +A+ AL LG +A R Sbjct: 121 ADRLIVELRDRLADL--DVLEDTSPL---SGGSDARAEARADALEALTELGLSKADAERS 175 Query: 181 VSKIARPDA---SSETLIREALRA 201 + ++ R +A S++ L+R AL+A Sbjct: 176 IRQVLRDNAGIQSADELVRRALKA 199 >UniRef50_C0ZAN3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Bacillales RepID=RUVA_BREBN Length = 205 Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 12/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + ++IE GG+GY + P + E G + +FTH VREDA LL Sbjct: 1 MIDFVEGTLSYLDSEYIVIETGGIGYRLFCPNPYQFVRYE-GNKTKLFTHHHVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LF++L+ +G+GPK LAIL+ + +Q V AV++E V L K PGIGKKT Sbjct: 60 YGFATRDERDLFRKLLDVSGIGPKGGLAILAAATPEQLVMAVQQENVTYLTKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE---QEAVAALVALGYKPQEA 177 A+R+I+++KD+ G +TP+A L + + A + A EA+ AL ALGY E Sbjct: 120 AQRIILDLKDKLVG-----YTPSAILTVAAGDLTAGEQAVSALNEALDALTALGYSDGEL 174 Query: 178 SRM---VSKIARPDASSETLIREAL 199 ++ +S+ ++ E LI++ L Sbjct: 175 QKIRNTLSEKSKEGDGVEKLIKQGL 199 >UniRef50_C6P9B0 Holliday junction DNA helicase RuvA n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9B0_CLOTS Length = 188 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 18/201 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I+E+ V++E G+G+++ +P + ELP ++T+ V+ED Sbjct: 1 MIDYIKGAIVERGIDYVVVETLGIGFKIIVPTSTLRELPNTNDIIKLYTYLHVKEDGFQF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E +FK+LI NGVGPK A++ILS +S F NA++ + + K PGIGKKT Sbjct: 61 YGFLTINEMEIFKKLIAVNGVGPKAAVSILSTISIDNFYNAIKNGDSKIIEKSPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ LF A+ V DDA ++ + AL++LGY QE+ Sbjct: 121 AQRIILELKDK-------LFINNAEAV-------KIDDASEDVLNALLSLGYTRQES--- 163 Query: 181 VSKIARPDAS-SETLIREALR 200 +S + D + +E +REAL+ Sbjct: 164 ISALYGIDCTNTENALREALK 184 >UniRef50_Q3A231 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfuromonadales RepID=RUVA_PELCD Length = 197 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 121/205 (59%), Gaps = 17/205 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVREDAQL 59 MI L G +IEK V+++VGGVGY + +P++ +Y LP+ G + V TH VREDA L Sbjct: 1 MIALLNGQLIEKTVSQVILDVGGVGYRLLIPLSTYYALPDEGDVRLRVHTH--VREDALL 58 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + E+ LF L+ +GVGPK+AL ILS + A A+ + L +PGIGKK Sbjct: 59 LFGFLTETEKDLFGLLLSVSGVGPKVALNILSHLPAADLQQALSQGNAKHLATVPGIGKK 118 Query: 120 TAERLIVEMKDR---FKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 TAERL++E++++ + + G+ PA D ++A++ALV LGYK Sbjct: 119 TAERLVLELREKVGPVQAVPGNAPLPAE----------TAGDLREDALSALVNLGYKENL 168 Query: 177 ASRMVSKI-ARPDASSETLIREALR 200 + + + I PDA E ++++AL+ Sbjct: 169 SRKALDGIDTAPDAPLEDILKQALK 193 >UniRef50_Q1D2J5 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Cystobacterineae RepID=RUVA_MYXXD Length = 202 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/204 (42%), Positives = 121/204 (59%), Gaps = 10/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RLRG ++EK I+VGGVGY V+ +LP GQ V VVREDA L Sbjct: 1 MISRLRGTVLEKDLEDATIDVGGVGYRVNFSSLALGKLPAEGQPVDVRVRTVVREDAFDL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E +F L + VGP+L+L +LSGM + V A+ R EV L K+ G+GKKT Sbjct: 61 FGFLTKGEEEVFLLLNSVSRVGPRLSLMVLSGMEVPELVAALSRGEVARLAKIHGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYK-PQ--EA 177 AERL++E+KD+ K +H + + T+PA A A + V+AL+ LGYK PQ +A Sbjct: 121 AERLVLELKDKVKTIHLEAVSRG-----TAPA--AVSGAHADLVSALLNLGYKQPQAEKA 173 Query: 178 SRMVSKIARPDASSETLIREALRA 201 + + S+ +A+ + L REAL+A Sbjct: 174 ADLASERLGAEATFQALFREALKA 197 >UniRef50_A5D3G0 Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3G0_PELTS Length = 211 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 13/202 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + E Q V+++VGG+GY V +P++ +LP G++ +++TH VRE+ L Sbjct: 16 MISYIKGKLAEVQAGAVVLDVGGIGYRVQVPLSVLNKLPARGEDVLLYTHLAVREEGFFL 75 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+++ E F +L+ +G+GPK+ALAIL+ S + + + AL ++PG+GKKT Sbjct: 76 YGFSDQNELGFFLKLLGVSGIGPKVALAILTIFSPDELGRIIIGGDTAALTRVPGVGKKT 135 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ + L E +AV AL ALGY EA + Sbjct: 136 AGRIILELKDK-----------VTETTLEREPLSGRSGVEADAVEALEALGYTAAEALKA 184 Query: 181 VSKIARPDA--SSETLIREALR 200 V ++ + S+ ++REALR Sbjct: 185 VKEVLKGPGQPSAAEIVREALR 206 >UniRef50_C1F8Z2 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Acidobacteria RepID=RUVA_ACIC5 Length = 198 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 117/204 (57%), Gaps = 13/204 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ KQP ++E GVGY+V + + F LP G E + H V EDA L Sbjct: 1 MIAHLRGTLLSKQPGQAIVECAGVGYDVAISVPTFTALPAEGAEVRLHIHTQVSEDAIAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++E+ LF+ LI +GVGPKLA+ +LSG+S ++ V A+ ++ +L ++PG+GKK Sbjct: 61 FGFLDREEKRLFERLITVSGVGPKLAIKMLSGLSPERTVAALRAQDHASLTRIPGVGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VE+KD+ DL A + A D ++AL+ LGY+ A + Sbjct: 121 AERLVVELKDKLD----DLIAAAPAAGPVAAGPAAED-----VLSALLNLGYQRPAALKA 171 Query: 181 VSKIARPDASS----ETLIREALR 200 + DA++ + L R AL+ Sbjct: 172 IETAVEKDAAAGEDFDLLFRAALK 195 >UniRef50_C9LUM4 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUM4_9FIRM Length = 201 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 5/200 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + ++V GVGY V + L G+E +FTH VREDA L Sbjct: 1 MIGFLRGKVARLSLDFCFLDVAGVGYRVFISGATHGRL-HMGEEVTLFTHLAVREDAMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF+ LI G+GPK AL ILS ++ + AV ++ L K PGIGKK+ Sbjct: 60 YGFFSEEEYELFQMLISVTGIGPKAALGILSNITPENLCLAVRNKKADILTKAPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ KG + + +L P D EA AAL++LGY E + + Sbjct: 120 AERIILELKDKMKGFMTEHEAIVEEGLLEEPVE---DTMLAEAGAALLSLGYTQAEFTPI 176 Query: 181 VSKIARPDASSETLIREALR 200 + + A+ +E LIR AL+ Sbjct: 177 LRR-AKDCKDAEALIRFALK 195 >UniRef50_Q24UN6 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfitobacterium hafniense RepID=RUVA_DESHY Length = 201 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 121/209 (57%), Gaps = 21/209 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + E Q ++++V GVGY++ +P + G E I++TH ++RED L Sbjct: 1 MIGMLRGKVWEIQADKLILDVQGVGYQLSIPYGLLGK-AHPGHELILYTHVILREDELAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ E+ LF ++ +G+GPK AL+ILS + Q +A+ E + L K+PGIGKKT Sbjct: 60 YGFSSAAEKELFLLMLSVSGIGPKAALSILSTLGIGQTESAIASENITLLTKVPGIGKKT 119 Query: 121 AERLIVEMKDRFKG----LHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 A+RLI+E+K++FKG L G + S EA+ L+ALG+ +E Sbjct: 120 AQRLILELKEKFKGRAIALEG----------IEGAGSLPQAAFHSEAMETLLALGFSQEE 169 Query: 177 ASRMVSKIARPDA----SSETLIREALRA 201 A + + A PD+ S+E +R ALR+ Sbjct: 170 AKKALQ--ALPDSAQALSTEEQVRLALRS 196 >UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCB68 Length = 200 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 114/201 (56%), Gaps = 9/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + P ++V VGY V + L G+E +++ H VREDA LL Sbjct: 1 MIGFLRGKVTYTFPDYCFLDVHDVGYRVFVSHQTRNHLS-VGEEVMLYIHTHVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF+ LI +G+GPK+A ILS ++A +F + +++V A+ KLPGIGKKT Sbjct: 60 YGFFSQEEYDLFQHLIGISGIGPKVAQGILSAITANEFYRLIHQKDVKAITKLPGIGKKT 119 Query: 121 AERLIVEMKDRF--KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 AER+I+E+KD+ D F A + + + D EA AL+ LG+ E Sbjct: 120 AERIILELKDKLTSSSFDDDSFADHA-----AGFADSMGDKISEATEALLNLGFGQSEIQ 174 Query: 179 RMVSKIARPDASSETLIREAL 199 ++ K + S+E +IR AL Sbjct: 175 SVLKKKMDWE-STEEIIRYAL 194 >UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NVI5_9DELT Length = 212 Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 12/193 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + +K +++EVGGVGYEV P LP G+E ++ VVRED+ L Sbjct: 1 MIATLRGQLTQKGADSLIVEVGGVGYEVFFPAGRQDRLPPRGEELFLYIQTVVREDSFCL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ F L+ +GVGP+LA+ IL+ + A+ +++ L KLPG+GKKT Sbjct: 61 YGFVDAAEKQFFLLLLGVSGVGPRLAMNILAAAAPDVLGRAIATDDIAGLKKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE-------QEAVAALVALGYK 173 AERL +E+KD+ D F A L A PA A+ Q+A +AL+ LGY Sbjct: 121 AERLCLELKDKV-----DFFPAAKPLARPDQAPPAEQGADFGAQPVFQDAYSALLNLGYP 175 Query: 174 PQEASRMVSKIAR 186 P A + ++ R Sbjct: 176 PVRARSALEEVRR 188 >UniRef50_C4Z030 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Clostridiales RepID=RUVA_EUBE2 Length = 207 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 122/209 (58%), Gaps = 16/209 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + E P ++++E G+GY +++P + ELP G E ++T+ V+ED L Sbjct: 1 MISYIKGELAEILPDVIVVEANGIGYNIYVPGSVPGELPSVGSEVKIYTYMNVKEDECSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + + ++FK LI NG+GPK AL LS ++A AV ++V A+ LPGIG KT Sbjct: 61 FGFLTRDDLSMFKMLICVNGIGPKAALGALSNITADDLRFAVLADDVAAIKALPGIGPKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE--------QEAVAALVALGY 172 A+++I+E+KD+ K ++F A S A +++ +AV ALV+LGY Sbjct: 121 AQKIIIELKDKLK--LDEVFESA-----LSKNKKADNNSNVSNVMMIRNDAVEALVSLGY 173 Query: 173 KPQEASRMVSKIAR-PDASSETLIREALR 200 ++A V ++ + SET+++EAL+ Sbjct: 174 SSKDALVAVKEVEDIENKDSETVLKEALK 202 >UniRef50_Q6GG62 Holliday junction ATP-dependent DNA helicase ruvA n=53 Tax=Staphylococcus aureus RepID=RUVA_STAAR Length = 200 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + P V++E GVGYE+ P + ++ E ++ T +VREDAQLL Sbjct: 1 MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQ-KHLDHEVLIHTSLIVREDAQLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++E+ +F LIK G+GPK ALAIL+ + + A+E E L K PGIGKKT Sbjct: 60 YGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + K D + L+ S D QEA+ AL ALGY +E +++ Sbjct: 120 ARQIVLDLKGKVKITEED----SDSLLQVDATSTEQDQFVQEAMLALEALGYSKRELAKV 175 Query: 181 VSKIARPDASSETLIREALRAAL 203 + + S + EA++A L Sbjct: 176 EKTLNKNKYDS---VDEAVKAGL 195 >UniRef50_A6TQM4 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Alkaliphilus RepID=RUVA_ALKMQ Length = 194 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 69/200 (34%), Positives = 112/200 (56%), Gaps = 10/200 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G+I+E Q +++EV G+GY ++ + ++ + GQ + +FTHFV+RED L Sbjct: 1 MFEYMKGMIVEAQIDKIIVEVNGIGYRINSSINSASQV-KIGQVSTLFTHFVLREDEAHL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K+E +FK+LI + +GPK+A ILS + Q+ + + A+ K PG+GKKT Sbjct: 60 YGFVDKEELAMFKKLISVSKIGPKVAAGILSTYTPQRLGAYIVSNDAQAIAKSPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ + + + E V AL+ALGY E + Sbjct: 120 AERMILELKDKIDD---------SQVEYDQNFFNHENKNNNEVVDALMALGYTKHEGEQA 170 Query: 181 VSKIARPDASSETLIREALR 200 S + S+E +IR+AL Sbjct: 171 ASAVRDTSLSTEEMIRKALN 190 >UniRef50_C9RMJ7 Holliday junction DNA helicase RuvA n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ7_FIBSS Length = 202 Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG++++K P V++E GVGY V++ +LPE G E I+ T+ VVRED+ L Sbjct: 1 MIERIRGVLVQKSPTFVVVECAGVGYGVNISAFTAGKLPEEGAEVILHTNLVVREDSMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF L++ NGVGPKLA ILSG + +N + + AL K+ G+GKKT Sbjct: 61 FGFADTTEKNLFLMLLEVNGVGPKLAQRILSGSTPADLLNMIASDNKSALGKIKGLGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPAS-PATDDAEQEAVAALVALGYKPQEASR 179 E++ + +K++ ++ D+ + S A A+ EAV AL LG K A + Sbjct: 121 CEQMTLTLKEK----ASNMLQALGDVEGSGITSVGALTGAKLEAVLALHTLGVKDPAAEK 176 Query: 180 MVSK---IARPDASSETLIREALR 200 V K + A + LI EAL+ Sbjct: 177 AVVKAVEVLGDGADAAALIPEALK 200 >UniRef50_C8WQH8 Holliday junction DNA helicase RuvA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQH8_ALIAD Length = 208 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/199 (40%), Positives = 112/199 (56%), Gaps = 7/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + P V ++V VGY VH+ L G A ++TH VRED L Sbjct: 1 MIAFLRGRVAFLGPGYVDLDVRDVGYRVHVCDRTQAAL-NLGDTAFLYTHHHVREDGWAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER LF+ L+ +G+GPKLAL ++ + V A+ E+ +L +LPGIG+K Sbjct: 60 YGFETIEERALFERLVAVSGIGPKLALQVIGAAGVGEIVAAILAEDAESLSRLPGIGRKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL+VE++++ D PAA +SP AE +AV+ALVALGY+P+EA Sbjct: 120 ASRLVVELREKL-----DDLAPAALRAPAPASSPQGSAAE-DAVSALVALGYRPREAEEA 173 Query: 181 VSKIARPDASSETLIREAL 199 VS + R S E I+ AL Sbjct: 174 VSAVGRGRQSVEDTIKAAL 192 >UniRef50_Q6MKB7 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Bdellovibrio bacteriovorus RepID=RUVA_BDEBA Length = 196 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/201 (40%), Positives = 110/201 (54%), Gaps = 13/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 MIG LRG IIE LI+V GVGYE+H +L G + IV+ H VREDA Sbjct: 1 MIGYLRGKIIEVMNDSALIDVSGVGYEIHASSNTLGDLQALLGNDIIVWIHTHVREDALQ 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF++K+E+ LF L+K NGVGPK+AL+ILSG Q +E AL LP +GKK Sbjct: 61 LFGFHDKEEKNLFLSLLKVNGVGPKMALSILSGGRPAQIHEMIEAGNAKALSGLPKVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAE++I+ +K G L + V+ S A + +AL+ LGYK Q + Sbjct: 121 TAEQIILTLK-------GKLVSIEEGGVVAKAKSV----AHTQITSALLNLGYKSQLVDQ 169 Query: 180 MVSKIARPDASSETLIREALR 200 VS + D + E IR+ + Sbjct: 170 FVSSLP-ADIAVEDGIRKGFQ 189 >UniRef50_B2A5L5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVA_NATTJ Length = 214 Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 19/215 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG ++E P ++ GG+GY++++P C E+P+ GQE + T+ VREDA L Sbjct: 1 MITRIRGEMLEITPDYCVVMAGGLGYKIYIPDNCQEEIPDPGQEIDLHTYLSVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ++ +F+ ++ +G+GPK+ALA++ + +F +V ++V L K+PGIGKK+ Sbjct: 61 YGFTSGEQLAVFELIMNVSGIGPKIALALVGTIPPTEFYLSVLNDQVNQLTKVPGIGKKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQ------------EAVAALV 168 A+R+I+E+K++ K + + D AS D+ + E AAL Sbjct: 121 AQRIILELKEKVKDI------TSKDAYQDISASEKLDNTGEKLGISTRHKHLDELKAALS 174 Query: 169 ALGYKPQEASRMVSKIARPDASSETLIREALRAAL 203 +LGY +E + V I + + E LR AL Sbjct: 175 SLGYTNREIEKTVDAIQGQITEGQDM-EELLRLAL 208 >UniRef50_B8CXG3 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Halothermothrix orenii H 168 RepID=RUVA_HALOH Length = 194 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G +I K V++E GGVGY V +P T L G++ +F + VRED+ L Sbjct: 1 MIGYLKGNVIWKAENKVILETGGVGYRVLVPSTV--RLKPVGEKLELFVYTYVREDSLDL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER LF+ L+ +G+GP+ A+ ILS +S ++F+ A+ E+V L ++ GIG KT Sbjct: 59 YGFKTMEERELFETLLSVSGIGPRAAINILSSLSYKKFIEAILTEKVSILKQVSGIGPKT 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K + K + GD P D+ E AL +LGY E Sbjct: 119 AKRLILELKGKLKDMSGDF------------EEPLPDNRNTELSDALASLGYSELEIEEA 166 Query: 181 VSKI-ARPDASSETLIREAL 199 +S + + S E I++AL Sbjct: 167 LSNADIKNNGSLEENIKKAL 186 >UniRef50_Q67Q98 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Clostridiales RepID=RUVA_SYMTH Length = 205 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ V+I+V GVGY +P + LP G ++T+ VREDA L Sbjct: 1 MIAHLRGELVTAGADWVVIDVAGVGYRCLVPASTRSRLPAQGAAVQLYTYLQVREDALTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E LF+ L++ +GVGPK+ALA+LS F AV E++ A+ ++PGIG+KT Sbjct: 61 YGFLTQAEYDLFELLLRVDGVGPKVALAVLSTTDPAAFRRAVAFEDLDAICRVPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADL-VLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+RL++E+KD+ + L V +PA DA EA AL+ALGY EA+ Sbjct: 121 AQRLVLELKDKIGAVPAGGGGVPDGLPVAVAPAG----DAWAEASEALIALGYSRGEAAA 176 Query: 180 MVSKIARPDA---SSETLIREALR 200 ++++ S ETL+R AL+ Sbjct: 177 ALARVRAEAGEAPSVETLVRLALK 200 >UniRef50_UPI0001C37714 Holliday junction DNA helicase RuvA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37714 Length = 206 Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 2/200 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + K+ +IE GGVGY L E G EA+++TH VREDA L Sbjct: 1 MIYSLKGKLTVKELGFAVIECGGVGYGCKTSYNTIASLGEVGSEAMLYTHLYVREDAVEL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +QE + F+ LI +GVGPK A++ILS ++ ++F V + + + GIG KT Sbjct: 61 FGFATQQELSCFRLLISVSGVGPKAAISILSDVTPEKFAFLVASGDSKSFTRTKGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ + + D +P+S A D+ EA+ AL+ LGY E + + Sbjct: 121 AQRIVLELKDKIS-SESISGSVSGDAAAFAPSSAAPSDSVSEALEALMVLGYTQGETAPI 179 Query: 181 VSKIARPDASSETLIREALR 200 + K+ P S++ LI+E LR Sbjct: 180 LGKL-DPSMSTQDLIKETLR 198 >UniRef50_Q6MFA5 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Parachlamydiaceae RepID=RUVA_PARUW Length = 201 Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 12/187 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G++ P +++V GVGY + +P +LP+ G+ +T +VVRE + L Sbjct: 1 MFAYIKGVLAFFNPSQAIVDVHGVGYLLFIPCRLLGQLPQIGEPVQFYTTYVVREFSHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + QER +F+ L+ G+GPK+AL+++ +S + AV R+++ L ++PG+GKKT Sbjct: 61 YGFLSYQERDIFEILMNVTGIGPKMALSLIGHLSMSELQIAVMRQDLSTLCRVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE----QEAVAALVALGYKPQE 176 AERLIVE+KD+ + G L T + P T D + Q+A+ AL+ LGY Sbjct: 121 AERLIVELKDKLAAI-GHLDT-------SDHIEPLTQDPKSKSVQDAMLALINLGYNQTT 172 Query: 177 ASRMVSK 183 A + + + Sbjct: 173 AQKAIKQ 179 >UniRef50_B6YR38 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=RUVA_AZOPC Length = 196 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 120/203 (59%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I+E P V+IE G +GY + + + ++ L + + ++ + V+RE+ L Sbjct: 1 MLDFIKGEIVELIPDSVIIETGNIGYMLFISLNTYFSLTKI-KSCKLYIYEVIREETHQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K+ER LF LI GVG +A +LS +S + + V AL L GIG KT Sbjct: 60 FGFIDKKERQLFTHLISVPGVGANIARMVLSSLSVCELEEIIFSGNVSALQALKGIGNKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+++KD+ K + P++D ++T+ +S T +EA+ AL+ LG+ + ++ Sbjct: 120 AERIIIDLKDKVKPDN----IPSSDTIITNISSNIT----KEAITALITLGFSQSASQKV 171 Query: 181 VSKIARPDASSET---LIREALR 200 V+KI ++SS T +I++AL+ Sbjct: 172 VNKIVSNNSSSTTIEQIIKKALK 194 >UniRef50_C8W783 Holliday junction DNA helicase RuvA n=2 Tax=Atopobium RepID=C8W783_ATOPD Length = 210 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 13/186 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVREDAQL 59 MI +L G ++ P + +++V GVGYE+ + + LP+AG+ + V T VVRED+ Sbjct: 1 MIVQLTGTLVSVTPSVAVLDVNGVGYELGISASTAAALPQAGEAGVTVLTRMVVREDSME 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF +++ER LF L +GVGPKLAL++LS + QQ V + L + G+GKK Sbjct: 61 LFGFASREERALFDRLRAISGVGPKLALSVLSTFTPQQLAVIVATNDGNRLKSVSGLGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLV-LTSPAS------PATDDAEQEAVAALVALGY 172 AERLI+E+ D F T LV LTSP P E EA+ AL+ +G+ Sbjct: 121 KAERLIIELSDVFAK-----DTELKQLVGLTSPTDFASIPKPTVTSVESEAIEALLGMGF 175 Query: 173 KPQEAS 178 QEA+ Sbjct: 176 TSQEAT 181 >UniRef50_C2D6U7 Crossover junction endonuclease RuvA n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6U7_9ACTN Length = 214 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 119/216 (55%), Gaps = 24/216 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVREDAQL 59 MI +L G ++E P V+++V GVGYE+ + LP GQ A+ + +V+E+A Sbjct: 1 MIVQLTGTLVEVFPNSVVLDVQGVGYELGISANTAANLPACGQTAVTLLVRMIVKENAME 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+++QER F LI +GVGPKLALA+LS S E+V + ++PG+GKK Sbjct: 61 LYGFSSRQERNAFDRLIDISGVGPKLALAVLSTYSLSDLATIALSEDVTRMAQVPGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQ---------EAVAALVAL 170 A+RL++E+ D+F A+L + + A T A + +A +AL+A+ Sbjct: 121 KAQRLLIEL--------ADVFAKDAELRILASAEQKTSGAREQAPQHSVLDDAQSALLAM 172 Query: 171 GYKPQEASRMVSKIAR------PDASSETLIREALR 200 G+ PQE + + P +++T+I +AL+ Sbjct: 173 GFTPQEVELALKPYDKKECNDNPSLTAQTVITQALQ 208 >UniRef50_Q3ATE5 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Chlorobiaceae RepID=RUVA_CHLCH Length = 204 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M RG +I +IE+ GV Y + T +LP +G E +F H VREDA LL Sbjct: 1 MYAYFRGTLISFTADEAIIELQGVAYHFLISATTSRQLPNSGSEVQLFAHLYVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ER LF+ L++ +GVGPKLAL++LSG+ + +A+ L + G+GKKT Sbjct: 61 YGFYSEEERQLFRLLLQASGVGPKLALSVLSGLPVHEVHDAIVSNIPERLYGISGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E++D+ L L T A P + A +A+ ALV LG+ A + Sbjct: 121 AARIILELRDKILKLSPVLPTATA----RRPHN-AAQQLRDDAITALVTLGFPRAAAQKT 175 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ + D +S + E +++AL Sbjct: 176 VTSLL--DENSNCTVEEVVKSAL 196 >UniRef50_C4XIJ9 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Desulfovibrionales RepID=RUVA_DESMR Length = 202 Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 114/203 (56%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPL-VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G ++ ++ +++ GGVGYE+ +P LP G + +F H VVREDA Sbjct: 1 MIGYLEGRVVARRDRFAIVLTPGGVGYELELPTPVAAALPAPGGQVSLFVHTVVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + +R F+ LI + +GP+ ALAILS +A + V + ALV++PGIGKK Sbjct: 61 LFGFASLDDRETFRTLIGISKLGPRTALAILSHFTADDLLRVVASGDAEALVRVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A+R+ +E+ + +G PAA L +P+ P + VA L LGY EA + Sbjct: 121 SAQRIFIELSYKLEGR-----APAAGL---APSVPIPGGVAGDVVAGLTNLGYPEPEARQ 172 Query: 180 MVSKI--ARPDASSETLIREALR 200 + +++ A PD +R+AL+ Sbjct: 173 VAAEVLEAEPDLDVAAALRQALK 195 >UniRef50_D1N374 Holliday junction DNA helicase RuvA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N374_9BACT Length = 203 Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 95/146 (65%), Gaps = 1/146 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL GI+ E +I+VGGVGYE +P++ F +LP+ G + + VREDA L Sbjct: 1 MIARLTGILAESSFSGCIIDVGGVGYEALIPLSTFDKLPQPGNKVELHIFTQVREDAITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E+ LF++LI +G+G K+AL++LS M F +A+ ++ +L ++ G+GK+T Sbjct: 61 FGFATPEEKKLFQQLINVSGIGGKIALSVLSSMPVSGFCSAIASGDIKSLSRISGVGKRT 120 Query: 121 AERLIVEMKDRFKGL-HGDLFTPAAD 145 AER++VE++D+ + G +F P A+ Sbjct: 121 AERMVVELRDKLGSVAGGSVFVPDAE 146 >UniRef50_Q3ZZK6 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Dehalococcoides RepID=RUVA_DEHSC Length = 194 Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 99/185 (53%), Gaps = 14/185 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L GI+ +I V GVG+ +MP T + GQ VFTH VREDA L Sbjct: 1 MISSLNGILEASGKDWAVINVSGVGFRCYMPATSPALIGGLGQRVRVFTHLHVREDALSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E +LF+ LI +G+GPKL LA+LS M+A+ +A+ L +PGIGKKT Sbjct: 61 FGFATTEELSLFETLIDVSGIGPKLGLAMLSVMNAEALASAIISGNAELLSTIPGIGKKT 120 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 + R+I+E+KD+ K + + +A + +A L ALGY EA++ Sbjct: 121 SSRIILELKDKIAKNWEAGVLSQVT-------------EANSDILATLTALGYSSSEAAK 167 Query: 180 MVSKI 184 +S + Sbjct: 168 AISSL 172 >UniRef50_B5YKF0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RUVA_THEYD Length = 190 Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 111/199 (55%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G +I +P ++I+ GG+GY V +P+ + +E +FT +V+E++ + Sbjct: 1 MLDFIKGKVITVKPDKIVIQTGGIGYSVKIPIRVSRYI-NRDEETQIFTSLIVKEESIEI 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ER LF+ELIK G+GPK+A+ ILS + ++ E++ +L K+PGIGKKT Sbjct: 60 YGFLESSERDLFEELIKIAGIGPKMAINILSTYDRETLYKIIDHEDIKSLSKIPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E++ L + D + ++AL+ LGYK EA + Sbjct: 120 AQRILLELRGILPSLQYE-----------------KDQKYDDILSALLNLGYKRLEAKEV 162 Query: 181 VSKIARPDASSETLIREAL 199 + KI + T+IRE+L Sbjct: 163 LDKIYNNEKDEATIIRESL 181 >UniRef50_B4WL13 Holliday junction DNA helicase RuvA n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL13_9SYNE Length = 207 Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 21/211 (9%) Query: 1 MIGRLRGIIIEKQP-----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MIG ++GI+ + Q + +E GGVGY++ + +LP+ G+ +FTH RE Sbjct: 1 MIGYVKGILADSQKLPNGRVIATVEAGGVGYDMQVNPRTLSQLPQVGEPVRIFTHLQSRE 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 D Q+L+GF++K ER +F+ LI +G+G ++ +++L+ + + + +V L + PG Sbjct: 61 DLQMLFGFSSKAERDVFRLLISVSGIGSQMGMSLLNALGLNELIQSVVNGNARVLTRTPG 120 Query: 116 IGKKTAERLIVEMKDRFKGL--HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYK 173 +G KTAER+I+E+K + H + P P S +D E LVALGY Sbjct: 121 VGNKTAERIILELKTKLSEWRSHSGIVAPTG-----GPISAVQEDVEM----MLVALGYS 171 Query: 174 PQEASRMVSKIARPDASS-----ETLIREAL 199 E S+ + + A S E IREA+ Sbjct: 172 NSEISKALVAVGNGTALSKSDDVEDWIREAI 202 >UniRef50_C0ES21 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES21_9FIRM Length = 230 Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 121/207 (58%), Gaps = 10/207 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 +I ++G + K V+IE G+GY++ +P E +G+EA++ T+ VRED L Sbjct: 27 LISYIKGTVAYKGKDSVVIENHGIGYQIKVPSRVL-EGVNSGEEAMLHTYLYVREDQLAL 85 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF++ QE F+ L+ +G+GPK AL++LS MS + AV E+ ++ K PGIG K Sbjct: 86 FGFSSIQELETFQILLGISGIGPKAALSVLSTMSVEDLYYAVFSEDAKSIAKTPGIGPKG 145 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATD-DAEQEAVAALVALGYKPQEASR 179 A+R+I+E+KD+ L+ + + +P S T+ D+ + V ALVALGY EA R Sbjct: 146 AKRMIIELKDK---LNLEALESVSGAEEAAPQSSFTEGDSIADTVQALVALGYSNGEAYR 202 Query: 180 MVSKIARPDA---SSETLIREALRAAL 203 V + P+A +E L++EAL+ L Sbjct: 203 AVHSV--PEAEKLDAEQLLKEALKKVL 227 >UniRef50_C0WEE9 Holliday junction DNA helicase ruvA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEE9_9FIRM Length = 201 Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG ++G + +E GVGY ++M + + + V+T+ VREDA L Sbjct: 1 MIGFIKGRVDTIGSNYAFVETQGVGYRIYMNTSDLGRMV-LDDKVKVYTYLAVREDALTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF +LI +G+GPK+A ILS F+ A++ +V L KLPGIGKKT Sbjct: 60 YGFLSQEAYGLFTKLITVSGIGPKVAQGILSASKVDDFLLAIKNRDVKFLTKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD G G L P ++ +P PA+ A E + AL +LGY E S + Sbjct: 120 AERMLLELKD-LTGPEGPL--PESNGGFLAPEGPAS--ALTETMEALASLGYTQNEISGV 174 Query: 181 VSKI-ARPDASSETLIREALR 200 +++I D S+E L+++AL+ Sbjct: 175 MNRIKVTADMSAEDLLKKALQ 195 >UniRef50_C1D1T9 Putative Holliday junction ATP-dependent DNA helicase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1T9_DEIDV Length = 202 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 114/201 (56%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 +I L G++ E + +I GGVGYEV P +L GQ A + T FVVREDAQLL Sbjct: 4 VIAYLSGVVREVRENSAVIVAGGVGYEVQCPAGTLGKLV-VGQNAELSTRFVVREDAQLL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF++ LF + +GVGPKL L++LS M + +V L + G+GKKT Sbjct: 63 FGFSDADSLKLFDLVTGVSGVGPKLGLSLLSAMPVSALAQGLMAGDVKLLSSVSGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ PA + A+P + A ++A+ AL+ALG++ + + Sbjct: 123 AERLVLELQNKVPEHLAAAGVPAG-----TRATPVSSTAGRDAIEALLALGFREAQVRGV 177 Query: 181 VSKI--ARPDASSETLIREAL 199 V+++ A P S++ LIR+ L Sbjct: 178 VAELLGADPTQSADALIRKGL 198 >UniRef50_C2FZN8 Crossover junction endodeoxyribonuclease n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZN8_9SPHI Length = 194 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G ++ K P V+++V G+GY +H+ + F L + + +F F VRED+Q L Sbjct: 1 MYEYFNGKLVFKAPTHVVLDVNGIGYYIHISLNTF-ALIKDQENCKLFISFQVREDSQTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER LF+ LI +G+GP ILS ++ ++ +A+ +V + K+ GIG KT Sbjct: 60 FGFATEGERQLFEHLISVSGIGPNTGRMILSSITPEEIQSAIINGQVAVIQKIKGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGD-LFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+RLI+E++D+ K D L +P A T + P +EA++AL+ LG+ +A + Sbjct: 120 AQRLILELQDKLKKQGPDALISPVA----TKQSVP------EEALSALIMLGFVKNQAEK 169 Query: 180 MVSKI--ARPDASSETLIREALR 200 +++ I PD S E LI+ AL+ Sbjct: 170 VLNTIINTEPDLSVEQLIKLALK 192 >UniRef50_C7N4C8 Holliday junction DNA helicase, RuvA subunit n=4 Tax=Coriobacteriaceae RepID=C7N4C8_SLAHD Length = 197 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 109/203 (53%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + IEV GVG+ V MP + +LPE G+E +V T+ VREDA L Sbjct: 1 MIAFLNGRVAGHTTDTAFIEVNGVGFAVGMPASDLAKLPERGEEVLVHTYLAVREDAMAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ F++LI +GVGPK+ALA LS ++ NA+ +V A+ +PG+GKKT Sbjct: 61 YGFLTQDEKRFFEKLIGVSGVGPKVALAALSVYKPEELANAIAAGDVKAVSMIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQE---AVAALVALGYKPQEA 177 A+R+I+E+K F +D + S T +A + A AL+++G+ EA Sbjct: 121 AQRMILELKGSF-----------SDENMQSLFDQETAEATRRLEGAREALLSMGFSSAEA 169 Query: 178 SRMVSKIARPDASSETLIREALR 200 + + LI+ ALR Sbjct: 170 DLALKDAPEELHTDSALIQYALR 192 >UniRef50_A4QEN4 Holliday junction ATP-dependent DNA helicase ruvA n=17 Tax=Actinomycetales RepID=RUVA_CORGB Length = 206 Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +I +IE GVGYEV +L G+EA+V T VVREDA L Sbjct: 1 MIASLRGTVINIGLSSAVIECNGVGYEVVTTPNTLSQLVR-GEEALVLTTMVVREDAMKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + R +F L +G+GP+LALA S +S + A+ + AL ++PG+GK+ Sbjct: 60 YGFIDNESREMFSVLQTVSGLGPRLALACESVLSPLEISQAITNADAKALQRVPGVGKRM 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+K + + A + + A+ A++ ++ ALV LG+ +++ Sbjct: 120 ADRLIVELKGKVAAFAAGVVDEAGEQISLPNANIASEVVVEQVSQALVGLGFSEKQSDDA 179 Query: 181 VSKIARPDASSETLIREALRAAL 203 VS + D S +T ALRAAL Sbjct: 180 VSFVLAADPSLDT--SGALRAAL 200 >UniRef50_Q1AWE1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RUVA_RUBXD Length = 196 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 112/200 (56%), Gaps = 10/200 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RLRG ++EK P V+++ GGVGY P++ LP G+E +V T VVREDA LL Sbjct: 1 MIDRLRGQLVEKDPEGVVVDCGGVGYRAAAPLSTLRALPAVGEECVVHTRMVVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ER F L + VGP+LALA+LS M+ Q + A R +V +PG+G+KT Sbjct: 61 FGFATREEREAFDALTSVSKVGPRLALAVLSAMTPGQMMEAAARGDVHRFAAVPGLGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++ R AA A+ D EA AL LGY +EA R Sbjct: 121 AERLVLELRGR---------ELAAAGGGGGVAAGEGDGPFMEAREALTGLGYSLEEAERA 171 Query: 181 VSKIARPDASSETLIREALR 200 + + P + E I+ ALR Sbjct: 172 LRDVP-PQETVEQYIKAALR 190 >UniRef50_B0NYV4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYV4_9CLOT Length = 190 Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 114/196 (58%), Gaps = 19/196 (9%) Query: 13 QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLF 72 P +V+++ G+GY++ +PM P+ GQE ++TH VRED L+GF +K+E+ F Sbjct: 2 SPGMVVVDNHGIGYQMMVPMRG-ESFPKIGQEIKIYTHMHVREDDVSLFGFLSKEEKEAF 60 Query: 73 KELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRF 132 + LI NG+GPK+ L++LS +S + AV E+V + K PG+G K A++LI+E+KD+ Sbjct: 61 ELLIGVNGIGPKVGLSVLSTLSVYELKMAVISEDVKTISKTPGLGPKGAKKLILELKDKL 120 Query: 133 K-------GLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIA 185 G+ ++F +AD + D+ + LV+LGY EA+ V+K+ Sbjct: 121 SFEELEEDGVGAEIFDTSAD----------SSDSVMITIEGLVSLGYSKSEAAIAVNKVE 170 Query: 186 R-PDASSETLIREALR 200 D + E L+++AL+ Sbjct: 171 DAKDLTPEELLKKALK 186 >UniRef50_C8QYM5 Holliday junction DNA helicase RuvA n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYM5_9DELT Length = 215 Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 116/217 (53%), Gaps = 20/217 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + K P ++++VGGVGYEV +P + LP G+E ++ VVRED+ L Sbjct: 1 MIASLQGKLAHKGPDSLVLQVGGVGYEVFLPASRHDRLPAVGEELFLYIQTVVREDSFNL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +E+ +F+ L+ +GVGP+LA+ IL+ A+ ++ L KLPG+GKKT Sbjct: 61 YGFPDSREKRMFQLLLGVSGVGPRLAMNILAAAEPAALSRAIIAGDIVFLKKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA-------------TDDAEQEAVAAL 167 AERL +E+ D+ + F P A + P + + Q+A +AL Sbjct: 121 AERLCLELGDKME------FFPTATTDAGTVVGPGAALSPSSAAAADFNEPSFQDAYSAL 174 Query: 168 VALGYKPQEASRMVSKI-ARPDASSETLIREALRAAL 203 + LGY +A + + + D S E + E LR AL Sbjct: 175 LNLGYPASQARAALEGLRSAADVSLELPVEELLRQAL 211 >UniRef50_B0K955 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Thermoanaerobacteraceae RepID=RUVA_THEP3 Length = 187 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 23/203 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGII + V+I+ G+G +V +P + LP G ++T+ VRED + Sbjct: 1 MIEYVRGIIEDIGQDYVVIDFMGIGIKVFVPFSTLKVLPSKGNITKLYTYLQVREDGFQI 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E LF++L+ +GVGPK AL+ILS +S FV AV + AL PGIGKKT Sbjct: 61 FGFKTKEELDLFEKLLSVSGVGPKGALSILSVVSIDNFVKAVNAGDYKALTVAPGIGKKT 120 Query: 121 AERLIVEMKDRFKG---LHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AER+I+E+KD+ GD ++ EA+ AL+ALGY EA Sbjct: 121 AERIILELKDKLPKEIVFEGD------------------NNFSNEALEALLALGYTKSEA 162 Query: 178 SRMVSKIARPDASSETLIREALR 200 ++ I S E +++AL+ Sbjct: 163 IYALADITCD--SVEDAVKQALK 183 >UniRef50_C0EG91 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG91_9CLOT Length = 202 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/188 (38%), Positives = 106/188 (56%), Gaps = 10/188 (5%) Query: 16 LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKEL 75 L +I+ GG+GYE+ MT +L + G+ A ++T+ VREDA L+GF + +ER FK L Sbjct: 20 LAVIDCGGIGYEIRTTMTTASQLKQGGK-AKLYTYLNVREDAVELFGFFDTEERNCFKML 78 Query: 76 IKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKG- 134 I +GVGPK AL+ILS ++ QF V + +L + GIG K A+R+++E+KD+ Sbjct: 79 ISVSGVGPKAALSILSNVTPSQFALCVASGDSKSLTRAKGIGAKIAQRIVLELKDKISNE 138 Query: 135 -LHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSET 193 L G + S A P+ EAV+ALV LGY +A + +S D E Sbjct: 139 QLAGGVTDSG------SVALPSGSGNTAEAVSALVVLGYNKTDAVQALSSYP-ADTPVEE 191 Query: 194 LIREALRA 201 LI+ L+A Sbjct: 192 LIKAGLKA 199 >UniRef50_Q4L6Y7 Holliday junction ATP-dependent DNA helicase ruvA n=14 Tax=Bacillales RepID=RUVA_STAHJ Length = 201 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 6/181 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIE-VGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 M +RG + + P V++E + GVGYE+ P + ++ +E +++T +VREDAQL Sbjct: 1 MYAYIRGKLTQLFPTHVVVESINGVGYEIQTPNSYRFQ-KYLEKELVIYTSLIVREDAQL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF N++E+ +F LIK G+GPK ALAIL+ + + A+E E L K PGIGKK Sbjct: 60 LYGFINEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKMAIENENDAYLTKFPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA ++++++K + + T L+ + + +++ +EA+ AL ALGY +E S+ Sbjct: 120 TARQIVLDLKGKVQITRETTET----LLSMNEENSNSENLVKEALLALEALGYSKREISK 175 Query: 180 M 180 + Sbjct: 176 V 176 >UniRef50_B0VHI7 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHI7_9BACT Length = 202 Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 113/202 (55%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + K P L +IE G+G+E+ +P++ + +LP AG+ + T+ + +D + Sbjct: 4 MIQYISGTLTFKTPVLAIIETMGIGWELKIPISTYEKLPTAGKPCKLLTYLHISQDDIRI 63 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER LF L K G+GPK+AL+ILS +S F+ AV E G L ++PGIGKK+ Sbjct: 64 FGFATEAERELFVMLNKVGGIGPKIALSILSTLSIPTFIKAVNSGEEGLLTRVPGIGKKS 123 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+KD L + + D E +AL++LG+ + + Sbjct: 124 AQRLIVELKDDVHKLLNHIDQKELQI----------GDVSSEVESALLSLGFNLHQIRKE 173 Query: 181 VSKI--ARPDASSETLIREALR 200 ++ + + ++E LI+E ++ Sbjct: 174 LALMDESMQKLNTEELIKEIIK 195 >UniRef50_B3DZD2 Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZD2_METI4 Length = 211 Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 12/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G +I P +++EV G+G+EV ++ F LP E ++TH V E+ L Sbjct: 12 MISYLKGTLIYSLFPHIIVEVRGIGFEVFCSLSLFRNLPPLYSELTLYTHLEVSENRLEL 71 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 +GF + +E+ F+ L+ K +GVGP+ AL+IL+ + + AV R + L K+ GIG+K Sbjct: 72 FGFKDLEEQLTFRLLVEKVHGVGPRTALSILNVLPPSELKAAVGRADFRLLSKIKGIGEK 131 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA RL+VE+KD + A+ +S + D ++A+ ALVALGYK EA + Sbjct: 132 TAHRLVVELKDSW---------ATAEASSSSGTAIVGDRVFEDALRALVALGYKEPEALK 182 Query: 180 MVSKI--ARPDASSETLIREALRAA 202 + ++ P E +I+E L+ A Sbjct: 183 RLRRVREKHPQMDLEGIIKECLKLA 207 >UniRef50_C9R8U6 Holliday junction DNA helicase RuvA n=1 Tax=Ammonifex degensii KC4 RepID=C9R8U6_AMMDK Length = 193 Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 114/200 (57%), Gaps = 20/200 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ LRG ++EK+ +I VGG+G EV +P++ + LP G E ++T ++RED + Sbjct: 1 MLAFLRGSVLEKERGRAVILVGGMGLEVFLPLSLYERLPAKGGEVELYTCLLLREDRPEI 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ER F L+K GVGPK ALA+LS S ++ A+ E++ L +PG+GKKT Sbjct: 61 YGFGDREERDFFLRLLKIGGVGPKTALALLSCFSVEELREAIRSEDLEKLTVVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL++E+K+ +P +A +AVAAL+ LGY+ +EA Sbjct: 121 ARRLLLELKE-------------------EKGAPVEGEAAADAVAALINLGYRRREAEEA 161 Query: 181 VSKI-ARPDASSETLIREAL 199 V + AR E L++ +L Sbjct: 162 VREAKARGAQGIEELLKLSL 181 >UniRef50_C0ABP1 Holliday junction resolvasome DNA-binding subunit-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABP1_9BACT Length = 219 Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 62/147 (42%), Positives = 92/147 (62%), Gaps = 3/147 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++ E P ++E+ G GYEV++P+T +LP G + + T + REDAQ L Sbjct: 1 MITSIQGLLTEATPLRAVVEINGFGYEVNIPVTTAEKLPAVGAKVKLHTIVIYREDAQTL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF + +ER F+ +I + +GVGPKLAL I+S MS A+ ++ +L K PGIGKK Sbjct: 61 YGFASPEERDFFRLMIEQVSGVGPKLALTIMSRMSLPVLEGAIRAGDISSLSKCPGIGKK 120 Query: 120 TAERLIVEMKDRFKG--LHGDLFTPAA 144 TAERL+VE++ + GD +P A Sbjct: 121 TAERLVVELRAKVGASPAGGDAGSPVA 147 >UniRef50_B2RJ07 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Porphyromonas RepID=RUVA_PORG3 Length = 202 Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 117/207 (56%), Gaps = 14/207 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I+ P ++IE GVGY+V++ +T Y + +E +++ ++REDA LL Sbjct: 1 MIEYLKGAIVGLTPTNLVIECAGVGYDVNVSLTT-YSAYQGKKEGLIWITQLIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ K+ERTLF +L +GVGP A ILS + Q+ + + AL + GIG KT Sbjct: 60 YGFSTKEERTLFGQLTSVSGVGPTTARLILSSYAPQELAALITTGQADALKAVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTS-----PASPATDDAEQEAVAALVALGYKPQ 175 A+R+IV++K + + ++D +L++ A+ T + +EA++AL LG+ Sbjct: 120 AQRIIVDLKGKIQ------LETSSDEILSARTAVGDAALNTIASGEEAISALKMLGFADP 173 Query: 176 EASRMVSKIARPDAS--SETLIREALR 200 + V I D+S E +I+ ALR Sbjct: 174 AIRKAVKSILSEDSSLAVEDIIKRALR 200 >UniRef50_B2HN62 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Actinomycetales RepID=RUVA_MYCMM Length = 197 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 111/205 (54%), Gaps = 17/205 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++E V+IE GVGY V+ + L + G +A + T +VRED+ L Sbjct: 1 MISSLRGEVLEVALDHVVIEAAGVGYRVNATPSTLATLRQ-GTDARLITAMIVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + R LF L+ +GVGP+LA+A LS A A+ +V AL ++PGIGK+ Sbjct: 60 YGFVDGETRDLFLTLLSVSGVGPRLAMATLSVHDANGLRQALADGDVTALTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEA--VAALVALGYKPQEAS 178 AER++VE++D+ PA ++ +PA + A V ALV LG+ ++A Sbjct: 120 AERMVVELRDKVG--------PAG----SAATAPAVNGHTVRAPVVEALVGLGFAAKQAE 167 Query: 179 RMVSKIARPDASSETLIREALRAAL 203 K+ D + T ALRAAL Sbjct: 168 EATDKVLAGDGEATT--SSALRAAL 190 >UniRef50_Q2FPZ9 Holliday junction DNA helicase RuvA n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FPZ9_METHJ Length = 195 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 115/201 (57%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG++I + V++E GG+GY + +P + + + E I++T ++R+D L Sbjct: 1 MIARIRGLVIGYETGSVIVEAGGIGYRIRVPESVLTSITK-DDEIILYTELIIRQDLMQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E +F+ LI + +GP+ LAI+S +S + +A+ ++ L ++ G+GKK Sbjct: 60 YGFYTPEETEMFRLLISVSHIGPQTGLAIISRLSLPEICDAISSKKPEILSQVQGLGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E++ + ++L + P +P + Q+AV AL++LGY +EA Sbjct: 120 AERIILELQKK-----------VSELKIQYPQTPTSSTKIQDAVLALLSLGYSREEAMGA 168 Query: 181 VSKIA--RPDASSETLIREAL 199 + + A SS L+REAL Sbjct: 169 LERSALDTETVSSSELVREAL 189 >UniRef50_B5IKU6 Holliday junction DNA helicase RuvA n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IKU6_9CHRO Length = 214 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 21/214 (9%) Query: 1 MIGRLRGIIIE-----KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MIG L+G I + K+ L+L+ GVGYEV + + LP G + H +RE Sbjct: 1 MIGWLQGDIADPWQHDKRCGLLLL-CRGVGYEVQVSQRDWRRLPPPGSPLALHIHQSIRE 59 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 DA LYGF +QER LF++L+ +GVGP++A+ +L + ++ V A+ + ++ L + PG Sbjct: 60 DAWTLYGFTARQERDLFRDLVAVSGVGPQMAMGLLGALEMEELVQAIVQPDLRRLCQAPG 119 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA-----TDDAEQEAVAALVAL 170 +GK+TAERL VE++ R + + AA+ A P D + + LV+L Sbjct: 120 VGKRTAERLAVELRVRLQERYLGAVETAAE------ADPEQLPGLADGSRDDICGTLVSL 173 Query: 171 GYKPQEASRMVSKIAR----PDASSETLIREALR 200 G+ E R + +A +AS+E IR+ LR Sbjct: 174 GFADLEIHRALRAVASQGLTAEASTEDWIRDCLR 207 >UniRef50_A8FFR3 Holliday junction ATP-dependent DNA helicase ruvA n=20 Tax=Bacillales RepID=RUVA_BACP2 Length = 201 Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 118/208 (56%), Gaps = 13/208 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I P V+IE GGVGY+V+ P Y++ ++ ++T+ ++EDA L Sbjct: 1 MIEFVKGTIDYVCPQYVVIENGGVGYQVYSPNPFIYQI---NKQETIYTYHYIKEDAFSL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ LF +L+ G+GPK ALAIL+ ++A+ERE+ L+K PG+GKKT Sbjct: 58 YGFQTREEKALFTKLLNVTGIGPKGALAILASGDPGAVISAIEREDEAFLIKFPGVGKKT 117 Query: 121 AERLIVEMKDRFKG----LHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 A ++I+++K + + G+LF D + A D EA+ AL LGY +E Sbjct: 118 ARQIILDLKGKLADVVPEMIGNLFN-HEDHIQVETQQTALD----EALEALSVLGYGDRE 172 Query: 177 ASRMVSKIA-RPDASSETLIREALRAAL 203 ++ + + +++ +++AL+ L Sbjct: 173 IKKVYPLLKEEKNLTTDQYVKKALQKML 200 >UniRef50_B3DRX9 Holliday junction ATP-dependent DNA helicase ruvA n=18 Tax=Bifidobacteriaceae RepID=RUVA_BIFLD Length = 208 Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 6/183 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + LI+VGGVGYEV M T L AGQ+ VFT+ + +DA L Sbjct: 1 MIGMLTGRVESVETDTALIDVGGVGYEVRMSATDLSRL-HAGQDTRVFTYMNLSQDAITL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ + F +LIK +G+GPK+A ++LS ++ Q +A+ + AL K PG+GKK Sbjct: 60 HGFLDRDAKKTFLQLIKVSGIGPKVAQSLLSTLTPSQLAHAIADNDATALAKAPGLGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+K DL + + D ++ V L++LG++ Q+A + Sbjct: 120 AQKIILELKGSI-----DLSQIEGASAQAATSKSPVDTGTEQVVEGLISLGWRQQDAQQA 174 Query: 181 VSK 183 V++ Sbjct: 175 VAE 177 >UniRef50_C2BWM5 Holliday junction DNA helicase motor protein n=3 Tax=Mobiluncus RepID=C2BWM5_9ACTO Length = 194 Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYE-VHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI ++G ++ K+ + VGG+G E + P T +P G A V T+ VVRED+ Sbjct: 1 MISVIKGEVVSKKLDRATVLVGGLGLEFLATPNTLATLVP--GTTATVQTYLVVREDSLT 58 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L++ G+GPKL LA LS +S + AV +V AL +PG+GKK Sbjct: 59 LYGFASPSERDTFATLMQVKGIGPKLGLAALSVLSPEALAAAVANSDVAALQGIPGVGKK 118 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +AER+I+E+ D+ G+ G V S + A +A V AL LGY A+ Sbjct: 119 SAERMILEIGDKLGGVSG---------VAASTGATAGFNAST-VVEALSNLGYNQALATE 168 Query: 180 MVSKIARPDASSETLIREALR 200 V+ ++ DA T +REAL+ Sbjct: 169 AVNAVSASDA--PTALREALK 187 >UniRef50_A8SPH1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SPH1_9FIRM Length = 208 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 5/205 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + + +++E GG+GY + + LP VFT+ VRED L Sbjct: 1 MISYITGTLEYQSGNSIVVECGGIGYSMMISGQFMNRLPAMHSHIKVFTYMSVREDEISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E +FK L+ NGVGPK A++ILS ++ + AV E+V A+ + GIG K Sbjct: 61 YGFYDRDELEVFKVLLSVNGVGPKAAMSILSALTVNELRLAVVSEDVKAITRANGIGTKG 120 Query: 121 AERLIVEMKD--RFKGLHGDLFTPAADLVLTSPASPATDDAEQEA--VAALVALGYKPQE 176 A R+I+E+KD R + + + A + A D + A VAAL ALGY E Sbjct: 121 ASRIILELKDKLRLEDMIDAAYEDAMNGSRVGSGGVAQSDIDTRANVVAALTALGYSGVE 180 Query: 177 ASRMVSKI-ARPDASSETLIREALR 200 A R V+++ D E L++ +L+ Sbjct: 181 AGRAVNRVEGWQDMDEEQLLKASLK 205 >UniRef50_C7GZ09 Holliday junction DNA helicase RuvA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ09_9FIRM Length = 194 Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 112/199 (56%), Gaps = 8/199 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I EK ++++ G +GY++++P+ + E +E +V+T +VRED L Sbjct: 1 MIKFLRGRIFEKLESCIVLDTGNIGYQINLPLNSPFFTAEISEEVLVYTELIVREDDMSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + F L+ NGVG K +LA+LS + + A+ ++ + + GIGKKT Sbjct: 61 YGFEDFKTLNFFNLLMNINGVGAKASLALLSVSTVDELARAIASKDTAFISRANGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ +E+ D+ + + +L P+ + V TS S + EA AL++LGY EA + Sbjct: 121 AERIALELSDKVESIAYNL--PSNNEV-TSVVSG----NKAEACEALMSLGYNKNEAMNV 173 Query: 181 VSKIARPDASSETLIREAL 199 + + +++ IR+AL Sbjct: 174 LKSLDEG-LDTQSYIRKAL 191 >UniRef50_B7K970 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Cyanothece RepID=RUVA_CYAP7 Length = 209 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 15/196 (7%) Query: 1 MIGRLRGII--IEKQPP---LVLIEVGGVGYEVHMPMTCFYELP-EAGQEAIVFTHFVVR 54 MI L+G I K P ++++EV +GYE+ +P L E Q +FTH +R Sbjct: 1 MINYLKGKTTQILKTPSNRNILILEVNHIGYEIQIPSRLARNLSLEEDQIVQIFTHLQIR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 ED Q+LYGF+ ER LF++LI NGVG + A+A++ + + +NA+ +V L K P Sbjct: 61 EDQQILYGFSTDSERDLFRQLININGVGTQTAIALIDTLGIEALINAIVTNDVKTLSKTP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE--QEAVAALVALGY 172 G+G KTAER+ +E+K + + L +P S E +E L+ALGY Sbjct: 121 GVGPKTAERIALELKSKLSQWE-------QAIALKTPVSVGVPSREILEEVEMTLLALGY 173 Query: 173 KPQEASRMVSKIARPD 188 +E + +S I++ + Sbjct: 174 TDEEIDQAISAISQDN 189 >UniRef50_Q252Y0 Holliday junction ATP-dependent DNA helicase ruvA n=14 Tax=Chlamydiaceae RepID=RUVA_CHLFF Length = 207 Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 13/196 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAG---QEAIVFTHFVVREDA 57 M +RGI+ ++IE G+G+ + EL AG +E IV+T+ VVRE Sbjct: 1 MYDYIRGILTYMSSGTMVIECQGLGFSICASDRWLMEL--AGLLHREVIVYTYTVVRETE 58 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 +LYGF ++ ER F+ LI +GVGPK LAIL+ + + + E+V AL +PGIG Sbjct: 59 HVLYGFRSRGERECFRMLISFSGVGPKTGLAILNTFALSKLCSIARAEDVKALASVPGIG 118 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KKTAE+L+V++K + L P LTS PA ++ + AL ALGY A Sbjct: 119 KKTAEKLMVDLKQKLPEL-----LPLDSQTLTS-WKPAKPSCMEDGIQALAALGYPKSSA 172 Query: 178 SRMVSKIAR--PDASS 191 RM+++ PD +S Sbjct: 173 ERMIAEAITELPDNAS 188 >UniRef50_Q2JWZ2 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Synechococcus RepID=RUVA_SYNJA Length = 204 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/181 (39%), Positives = 95/181 (52%), Gaps = 5/181 (2%) Query: 19 IEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKT 78 +EV G+GY V P +LP G+ VFTH VVRE +LYGF + ER +F ELIK Sbjct: 22 VEVQGIGYRVKAPARFLKQLPPIGEPVRVFTHLVVRETELVLYGFGSPAERDVFVELIKV 81 Query: 79 NGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGD 138 +GVGP L LA+L+ + V AV E V L PG+G KTA+RL +E+K + Sbjct: 82 SGVGPALGLALLNTFGLPELVQAVVTENVRLLSLTPGVGHKTAQRLALELKTKLAHWRQG 141 Query: 139 LFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREA 198 L AD L PA + E AL+ALGY QE + + +E +R+A Sbjct: 142 LEN--ADRPLAGGPPPAIRE---EVEMALLALGYSLQEIQAALQALPSQPRPTEEWLRDA 196 Query: 199 L 199 + Sbjct: 197 I 197 >UniRef50_C4GBB6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBB6_9FIRM Length = 199 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + E P ++++ G+GYE+ +P + ++ Q V+T+ VR+D L Sbjct: 1 MFSYIQGRVEEINPEGIVLDHDGIGYEIGLPQSSLSQIRRQMQLR-VYTYLQVRDDGFSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++ LFK LI G+GPK AL+IL +S Q A+ + + + PGIGKKT Sbjct: 60 FGFLKREDLDLFKLLIGVGGIGPKGALSILGVLSVDQLRFAIAAGDDKTIAQAPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASP-ATDDAEQEAVAALVALGYKPQEASR 179 A+R+I++++D+ FT + L S AS ++DD EA+ AL ALGY EA + Sbjct: 120 AQRVILDLRDKID------FTQTLEAQLDSKASDRSSDDIRGEAILALNALGYSSAEALQ 173 Query: 180 MVSKIARPDASSETLIREALR 200 + + S E LIR L+ Sbjct: 174 AIRDLDISSMSVEDLIRAGLK 194 >UniRef50_A3CR11 Holliday junction ATP-dependent DNA helicase ruvA n=49 Tax=Firmicutes RepID=RUVA_STRSV Length = 196 Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 8/200 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +GII + +++EV +GY +H+ Y + QEA V+ H VVREDA+LL Sbjct: 1 MYEYFKGIISKITAKYIVLEVNSIGYILHVANPYAYS-GQLHQEAKVYVHQVVREDAELL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ LF LI +G+GP ALAI++ V A+E++ + L K P IGKKT Sbjct: 60 YGFATEEEKQLFLSLISVSGIGPVSALAIIAADDNAGLVQAIEQKNITYLTKFPKIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++++++ L G + + +P A + +EA+ A++ALGYK E ++ Sbjct: 120 AQQMVLD-------LEGKVVAAGSPAESKAPVQTADNQELEEAMEAMLALGYKAAELKKI 172 Query: 181 VSKIARPDASSETLIREALR 200 ++E I+ AL+ Sbjct: 173 KKFFEGTTDTAENYIKSALK 192 >UniRef50_Q5L9Q7 Holliday junction ATP-dependent DNA helicase ruvA n=38 Tax=Bacteroidetes RepID=RUVA_BACFN Length = 201 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 5/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I E P +I+ G+GY V++ + Y + ++ + +REDA +L Sbjct: 1 MIEYIKGEIAELSPATAVIDCNGLGYAVNISLNT-YSAIQGKSSCKLYIYEAIREDAYVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +KQER LF LI +G+G A ILS +S + VN + E L + GIG KT Sbjct: 60 YGFADKQERELFLLLISVSGIGGNTARMILSALSPAELVNVISTENANMLKTVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IV++KD+ K PA A + ++EA+AAL LG+ + + Sbjct: 120 AQRVIVDLKDKIKTGAMAATAVGGAAGALLPAMNA--EVQEEAIAALTMLGFAAAPSQKA 177 Query: 181 VSKIAR--PDASSETLIREALR 200 V I + PDA E +I+ AL+ Sbjct: 178 VLAILKEEPDAPVEKVIKLALK 199 >UniRef50_B0TF69 Holliday junction DNA helicase ruva n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF69_HELMI Length = 274 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 54/132 (40%), Positives = 85/132 (64%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ +L++V GVGY V +P T LP+ G++ ++ T + RED L Sbjct: 1 MIAFLRGRLVGLGDDCLLLDVSGVGYRVFVPATMLASLPQVGRDILIHTFYYAREDQVSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E F+ L++ +GVGPK+ L ILS S + A+ E+V AL ++PGIG+KT Sbjct: 61 YGFLTEEELAFFRLLLEVSGVGPKVGLGILSAYSVVEVQRAIIAEDVLALTRIPGIGRKT 120 Query: 121 AERLIVEMKDRF 132 A+RL++E++D+ Sbjct: 121 AQRLVIELRDKL 132 >UniRef50_Q183P4 Holliday junction DNA helicase n=7 Tax=Clostridium RepID=Q183P4_CLOD6 Length = 203 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 113/199 (56%), Gaps = 8/199 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + E +++E G+GY++++ L + G+ ++T +VRED L Sbjct: 4 MYSYIKGTVEEIYIDSIVVENNGIGYKINVSSNTIMNL-QVGEATKIYTKLIVREDDMSL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF +++E +F+ L + +GPK+AL+ILS S Q + E++G L K PG+GKKT Sbjct: 63 CGFVSREELKMFELLTSVSKIGPKVALSILSFASPAQLGAYILSEDIGKLSKAPGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD+ + + F P L+ P + D E+V ALVALGY E+ Sbjct: 123 AERIVLELKDKVDKNNIE-FEPT--LLSQKPTLISQD----ESVDALVALGYTLSESKEA 175 Query: 181 VSKIARPDASSETLIREAL 199 V K + ++E +I++AL Sbjct: 176 VQKCKKDGMNTEAIIKKAL 194 >UniRef50_Q0F2I8 Putative Holliday junction DNA helicase RuvA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2I8_9PROT Length = 188 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 110/204 (53%), Gaps = 21/204 (10%) Query: 1 MIGRLRGIIIEKQPP-LVLIEVGGVGYEVHMPMT--CFYELPEAGQEAIVFTHFVVREDA 57 MIG L G + P VL+ GG+GY+V + + C L EA + +I H VRED Sbjct: 1 MIGWLSGTVRALDPAGSVLLVTGGIGYDVSVSVQTLCKLRLGEAAELSI---HTYVREDQ 57 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 L+GF N ER +F++L +G+G ++AL ++ GMS ++ + A+E + A+ + PGIG Sbjct: 58 ITLFGFANSNEREIFRKLTSVSGIGARMALNLMGGMSIEELIGAIEHADDLAIARTPGIG 117 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KKTA+RLI+E L G L + AA+ A + E +AL LGYKP + Sbjct: 118 KKTAQRLILE-------LQGKLGSVAAE------GGAAISNKADEVRSALTNLGYKPAQI 164 Query: 178 SRMVSKIARPDASSETLIREALRA 201 + + D E++ R AL+A Sbjct: 165 DLALKHVEPAD--FESMFRAALKA 186 >UniRef50_Q7NCU2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gloeobacter violaceus RepID=RUVA_GLOVI Length = 206 Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 12/207 (5%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI +RG++ E P ++VGGVGY V +LP G+E +FT +VRED Sbjct: 1 MITFVRGMLAEVGPRSGQSWATVDVGGVGYRVWTHARTVGKLPRIGEEVKLFTLMIVRED 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A L+GF ER LF +L+ +G+GP++ LA+L ++ + V A+ + AL PG+ Sbjct: 61 AMQLFGFLEPGERELFGQLVSVSGIGPRMGLALLETLAPTELVQAILQGNTRALALAPGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G KTA+RL +E++ R + L++ + A+ +E AL+ALG+ P E Sbjct: 121 GAKTAQRLALELRSRLSKWR-------EESGLSAMGARASSRVYEEVELALLALGFAPGE 173 Query: 177 ASRMVSKIARPDASSETLIREALRAAL 203 R + +A P + E LRAA+ Sbjct: 174 VVRALDAVA-PAMAGEEQTEAWLRAAI 199 >UniRef50_B6XV05 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XV05_9BIFI Length = 210 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 17/192 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + +IEVGGVGYE MP + AGQ V+T V +DA L Sbjct: 6 MIGMLHGQVDSIDAASAIIEVGGVGYETRMPSADLASM-HAGQTVKVYTSLNVSQDAITL 64 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + +F +L K +G+GPK+AL++LS + ++ AV + AL K PG+GKK Sbjct: 65 YGFSSLASKRMFLQLQKVSGIGPKVALSLLSTLPPERLARAVADGDATALAKAPGLGKKG 124 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPAT----DDAEQEAVAALVALGYKPQE 176 A+++I+E+K DL ASP T D ++ V L++LG++ Q+ Sbjct: 125 AQKIILELKGSI------------DLSQIEGASPETRSTEDTGSEQVVEGLMSLGWRQQD 172 Query: 177 ASRMVSKIARPD 188 A V ++ + Sbjct: 173 AVHAVQEVCESN 184 >UniRef50_A8YTI1 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Lactobacillales RepID=RUVA_LACH4 Length = 196 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 10/191 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GI+ P ++++V GVGY+V+ P Y+ G +A +F VVR+ L Sbjct: 1 MYEYFEGIVTVITPSYIVVDVNGVGYKVYSPTPFAYQ---KGDKAKIFIEQVVRDTGITL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ++ LF +L+ +G+GPK ALAI++ A A+E+ EV L + PG+GKKT Sbjct: 58 YGFQSEDDKGLFLKLLSVSGIGPKSALAIMAAEDANSLAEAIEQGEVKYLTRFPGVGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + + L + SPA +D A+ AL+ALGY +E R+ Sbjct: 118 ASQIVLDLKGKLRDYVARLDRQDEE---QGNISPALND----ALLALIALGYTQKEVDRI 170 Query: 181 VSKIARPDASS 191 +K+ +A + Sbjct: 171 TTKLEEVNADT 181 >UniRef50_D0LZE6 Holliday junction DNA helicase RuvA n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZE6_HALO1 Length = 210 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 20/214 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI--VFTHFVVREDAQ 58 MIGRLRG ++E++ +V++E GGVGYEV + + LP G+ +FTH + E Sbjct: 1 MIGRLRGTLVEQEGSMVIVECGGVGYEVTVSIHTLQSLPAEGEPVTLRIFTHAL--ESRV 58 Query: 59 LLYGFNNKQERTLFKELIKTNGVGPKLALAILS-GMSAQQFVNAVEREEVGALVKLPGIG 117 LYGF + ER LF LI VGP A+ ILS G + + E +L +L G+G Sbjct: 59 ALYGFGSTLERDLFDLLITVKKVGPSSAVGILSAGSGPAEIAEMIANGETSSLTRLRGVG 118 Query: 118 KKTAERLIVEMKDRFKGLHGD--------LFTPAADLVLTSPASPATDDAEQEAVAALVA 169 KKTAE L+VE++++ + L A S P D+ Q AL+ Sbjct: 119 KKTAEMLVVELREKCELLLATHRVQGGRAAARAPAAAARPSSRGPLLDEVAQ----ALLQ 174 Query: 170 LGYKPQEASRMVSKIARPDA--SSETLIREALRA 201 LG++ Q ++VS++A P A S E+L+R+ALRA Sbjct: 175 LGWRQQSVDQVVSELA-PTAEDSLESLLRQALRA 207 >UniRef50_UPI00016C0EB8 Holliday junction DNA helicase RuvA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EB8 Length = 183 Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 26/202 (12%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + E+ ++L+EV G+GYE+ M E ++ + ++EDA L Sbjct: 1 MIGYLVGTVAERFENIILLEVNGIGYEIFMXGKI------DVAEVKIYIYENIKEDAYDL 54 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ LFK+LI NG+GPK A A++ + V + E+ + ++PGIG K Sbjct: 55 YGFVSLAEKELFKKLISVNGIGPKAAAALIV-LHGINLVECIVNEDASEITRVPGIGAKI 113 Query: 121 AERLIVEMKDR---FKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 A RLI+E+KD+ FK L + D +EA AALVALGY ++A Sbjct: 114 ASRLILELKDKLSAFKTLEKRVVV----------------DGLEEATAALVALGYNKKQA 157 Query: 178 SRMVSKIARPDASSETLIREAL 199 +R V+ + S E I++AL Sbjct: 158 ARAVNAVYNYSDSIEDTIKKAL 179 >UniRef50_C0W3R8 Crossover junction endodeoxyribonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3R8_9ACTO Length = 209 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 9/186 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +++ +IEVGGVG T L G+E V T VVREDA L Sbjct: 1 MIASLRGTVLDISLTGAVIEVGGVGMAFQATPTTLAGL-RVGEEGTVHTELVVREDALTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L+ GVG KLALAIL+ + A+ ++V AL ++PG+G K Sbjct: 60 FGFADADERQCFRVLLGAKGVGAKLALAILAVHTPDALRRAIASQDVAALKRVPGLGPKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA--TDDAEQEAVAALVALGYKPQEAS 178 A+R+I+++ D+ L G DL P +PA ++A + VAALV LG+ A Sbjct: 120 AQRVIIDVGDKLGPLTGQ------DLAAERPQAPAETGEEANPDVVAALVQLGWNEATAR 173 Query: 179 RMVSKI 184 + V + Sbjct: 174 QAVGAV 179 >UniRef50_C0GT45 Holliday junction DNA helicase RuvA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT45_9DELT Length = 203 Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIE-KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI +RG ++ +++ G+GYEVH+ +P G+E + T VVREDA Sbjct: 1 MIALIRGTLVSFNDKSCLVMTASGLGYEVHVSAMGLQNMPGQGEELELHTSMVVREDALD 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L+ +GPK ALAIL S Q + E+ AL ++PGIG K Sbjct: 61 LYGFFTRDERETFNVLLNAPKLGPKTALAILGIFSPSQIQKIINTEDEAALTQVPGIGSK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA RLI+++KDR + P PA P Q+ +A L +LGY E + Sbjct: 121 TARRLILDLKDRLGFISPQHEDP-------RPA-PGPRGVRQDVLAGLTSLGYSAAEVTP 172 Query: 180 MVSKI--ARPDASSETLIREALR 200 ++ ++ PD + IR L+ Sbjct: 173 LLDEVLEKEPDLDVSSAIRAVLK 195 >UniRef50_A5GTL6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Synechococcus sp. RCC307 RepID=RUVA_SYNR3 Length = 208 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 108/213 (50%), Gaps = 23/213 (10%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCF----YELPEAGQEAIVFTHFV 52 MIG L G I ++ +L+ G VGYE+ + + + E P V TH Sbjct: 1 MIGWLHGTIGDRWQEGNRCWLLLICGPVGYELQVSESLWRGTALESP-----TTVHTHLQ 55 Query: 53 VREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVK 112 RED Q LYGF K +R LF+ LI NGVGP++AL ++SG+ A + A+ E+V L + Sbjct: 56 QREDGQQLYGFETKADRNLFRLLISVNGVGPQVALGLISGLGAVSLLQAMAAEDVKVLCQ 115 Query: 113 LPGIGKKTAERLIVEMKDRF--KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVAL 170 PG+GK+TAERL +E + R + TP L L P + + +E A L AL Sbjct: 116 APGVGKRTAERLSLEWRSRLQERWQQQGGSTP---LRLVEPVAES-----RELRATLEAL 167 Query: 171 GYKPQEASRMVSKIARPDASSETLIREALRAAL 203 GY P+E S V++ E + E LR L Sbjct: 168 GYGPEEVSAAVAQAGSQGLDPEQPMEEWLRHCL 200 >UniRef50_Q11Z44 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Bacteroidetes RepID=RUVA_CYTH3 Length = 199 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 9/205 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + K P V+++V G+GY + + + F +L + + + T ++EDA L Sbjct: 1 MIAYIEGKLAHKDPTFVVVDVQGIGYHIRVSLHTFSQLKDL-ERVKIHTFLHIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F L +G+GP AL +LS M+ + A+ RE+V + + GIG KT Sbjct: 60 FGFADLMEKEMFLHLTSISGIGPGTALVVLSSMNPIELKEAIAREDVKTIQSVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K D +D S + + EA+ AL+ LG+ A + Sbjct: 120 AQRVILELKDKMK---KDALLAGSD--SKQNFSVSHNSIRSEALTALITLGFTKTVAEKN 174 Query: 181 VSKIARPDASS---ETLIREALRAA 202 + I + +++S E LI++AL+ + Sbjct: 175 LDLILKGNSNSFTLEDLIKQALKMS 199 >UniRef50_C4V2G2 Crossover junction endodeoxyribonuclease n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2G2_9FIRM Length = 199 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 111/201 (55%), Gaps = 10/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMP-MTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L+G L++V VGY V + T + P A E +++ H VREDA L Sbjct: 1 MIGFLKGKATHITSDYCLLDVHDVGYRVFISDQTRAHISPNA--EVMLYIHTNVREDAIL 58 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +++E LF LI +G+GPK+A ILS + F V++++V + KLPGIGKK Sbjct: 59 LYGFFSREEYDLFLLLIGISGIGPKVAQGILSSATVNDFYCMVQQKDVKGITKLPGIGKK 118 Query: 120 TAERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 TAER+++E+KD+ + DL P D + + + EA AL+ LG++ E Sbjct: 119 TAERILLELKDKLSDVSVEDL--PEGD---NNVGAEIENGMVAEATEALLTLGFQDSEIQ 173 Query: 179 RMVSKIARPDASSETLIREAL 199 R V + ++E LIR AL Sbjct: 174 R-VFRQKHSCQNTEELIRYAL 193 >UniRef50_C4FZH5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZH5_ABIDE Length = 204 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 25/209 (11%) Query: 3 GRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYG 62 G+L G+ E V+I+V G+G E +P T LP+ + + T+ VRED LYG Sbjct: 7 GKLEGVTTES----VIIDVNGLGVEAIVPTTVINLLPKIDENIKLHTYLHVREDVMQLYG 62 Query: 63 FNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAE 122 F K++ FK LI NG+GPK A+AILS M A+ E+ + K GIG KTA+ Sbjct: 63 FLEKEDLDFFKLLITVNGIGPKAAIAILSSMPTDILTFAILSEDTKTIQKAQGIGAKTAK 122 Query: 123 RLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA----------EQEAVAALVALGY 172 +L++E+KD+ G + TP + S D+A + EAV L ALGY Sbjct: 123 KLVLELKDKV----GIIKTPQ------NTGSEIYDNAALTIGINSEIKDEAVQVLTALGY 172 Query: 173 KPQEASRMVSKI-ARPDASSETLIREALR 200 EA + +S + + +SE L++ +L+ Sbjct: 173 SQTEAVKAISTVEMYEEMTSEELVKLSLK 201 >UniRef50_Q0TP12 Holliday junction ATP-dependent DNA helicase ruvA n=36 Tax=Clostridium RepID=RUVA_CLOP1 Length = 201 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 111/198 (56%), Gaps = 7/198 (3%) Query: 3 GRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYG 62 G+ +GI V+IE+ +GY++ +P+ G+E +++ +VRED LYG Sbjct: 7 GQFQGI----SKDYVVIELNNIGYKIFTSGNTMSNMPKVGEEVLLYLEQIVREDFIGLYG 62 Query: 63 FNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAE 122 F ++E +FK L+ NGVG K AL++LS + A+ + + + PGIGKKTA+ Sbjct: 63 FTTREELEMFKLLLSINGVGAKAALSLLSISTVNNLKYAIMMGDEKHITRAPGIGKKTAQ 122 Query: 123 RLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVS 182 R+I+E+KD+ K +L + +L+ + E ++AL+ALGY +EA + + Sbjct: 123 RIILELKDKLK--PDELTSEEGELIEGINDNSDYSFNINETLSALMALGYTEKEAQKALE 180 Query: 183 KIARPDASSETLIREALR 200 K+ + S E +I+E+L+ Sbjct: 181 KVDKT-LSIENMIKESLK 197 >UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCG6_9PROT Length = 180 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/200 (32%), Positives = 111/200 (55%), Gaps = 27/200 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I EK + ++V + YE+++ + F ++ I + +++E+ L Sbjct: 1 MIAALKGKIFEKDNGKIFLDVRDIIYELNVSLNTFAN----AKDGIFYITEIIKENEYSL 56 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK E+ LF LIK NGVGPK+ALAI S + +F++ + +++ +L K+PGIG K+ Sbjct: 57 YGFINKNEKKLFDNLIKLNGVGPKVALAICSTFTPDEFISIISSQDINSLKKVPGIGPKS 116 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++EM GD + +++ +AV AL LG+K + + Sbjct: 117 AKRILMEM--------GDFEIENINPIIS------------QAVTALENLGFKRADILKA 156 Query: 181 VSKIARPDASSETLIREALR 200 +S + D S E +I+EAL+ Sbjct: 157 ISGL---DGSLEDIIKEALK 173 >UniRef50_A6NV14 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NV14_9BACE Length = 201 Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 3/200 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G ++ P L +++ GGVGY L + G+ A ++TH VREDA L Sbjct: 1 MFYYVKGPVVHMAPYLAVVDCGGVGYACRTTNNTLARLRK-GETATLYTHLNVREDAMEL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E + F+ LI +GVGPK AL+ILS S + ++ + AL PGIGKK Sbjct: 60 YGFASENELSCFQLLISVSGVGPKAALSILSSTSPEGLATSIITGDEKALTVAPGIGKKI 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ G L TP + + + + EA AAL LGY EA+ Sbjct: 120 AQRIILELKDKLA--KGQLSTPGGESYGGTGVTVIPQNKASEAAAALAVLGYSQAEAAAA 177 Query: 181 VSKIARPDASSETLIREALR 200 + I + E +I++AL+ Sbjct: 178 LKNIDMETLALEEIIKQALK 197 >UniRef50_B3EU33 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=RUVA_AMOA5 Length = 194 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/204 (30%), Positives = 114/204 (55%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I K P ++++VGG+GYE+ + + + L + +FT+ + +DA L Sbjct: 1 MIAYIQGSITYKSPTQLIVDVGGIGYELQISLQTYDSLKDIAASCKIFTYLHITQDAHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E+ F +L+ NG+GP++A+ ILS ++ + A+ + L + GIG+K Sbjct: 61 YGFSTIEEKQCFLQLLSVNGIGPRVAITILSALTPEALQQAIMTHDTITLQAVKGIGQKA 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA-EQEAVAALVALGYKPQEASR 179 A+R+I+E++ + G G++ + P+ +A QEA+AAL LG A + Sbjct: 121 AQRIILELQGKV-GKVGNMLS----------LQPSGQEAIYQEALAALSKLGIHKSTAEK 169 Query: 180 MVSKIARP---DASSETLIREALR 200 V+ I + + + E+LI+ AL+ Sbjct: 170 TVAAILKEHQGEITVESLIKLALK 193 >UniRef50_Q2W2A3 Holliday junction ATP-dependent DNA helicase ruvA n=76 Tax=Alphaproteobacteria RepID=RUVA_MAGSA Length = 212 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 105/205 (51%), Gaps = 6/205 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G+I +++ GVGY V L E G A +F VREDA L Sbjct: 1 MIAKLKGLIDSLGDDWAVVDCNGVGYLVACSSKTLARL-ETGTAAALFVETQVREDAISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L GVG K+ALAILS S Q + + ++ L + G+G K Sbjct: 60 FGFLETGERDWFRLLTTVQGVGAKVALAILSVASPDQLLQIIAAQDKAGLTRANGVGPKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAA--DLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A R++ E+KD+ + F+P D + S PA ++AV+ALV LGYK EA Sbjct: 120 AVRILTELKDKAGKIALGGFSPGGIKDALSASAPLPAASGRMEDAVSALVNLGYKRLEAF 179 Query: 179 RMVSKIAR---PDASSETLIREALR 200 + V + AR +A S LIR AL+ Sbjct: 180 QAVGETARELGDEADSSALIRAALK 204 >UniRef50_C7LQQ8 Holliday junction DNA helicase RuvA n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQQ8_DESBD Length = 198 Score = 109 bits (272), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 115/203 (56%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEK-QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI L G ++ + + VL+ GGVGY++H+ LP AG A +F H +VREDA Sbjct: 1 MIAYLEGTVLRRDEESCVLLTAGGVGYQLHLTSDGLAALPGAGDTARLFVHTLVREDALT 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+ F++ +ER F L+ +GPK ALA+L S + + +E+V AL ++PGIG K Sbjct: 61 LFAFSSWEERQAFVTLLGAPKLGPKTALAMLGCYSPAELAACIAKEDVAALSRVPGIGAK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+RL++++KD+ + +P+ T+PA A+ D AALV+LGY E Sbjct: 121 TAKRLLLDLKDKL------VSSPSLLPGRTAPAPTASAD----CAAALVSLGYGRHEVDE 170 Query: 180 MVSKI--ARPDASSETLIREALR 200 +V + PD + + IR+AL+ Sbjct: 171 VVRVVFEKEPDLDAGSAIRQALK 193 >UniRef50_C9LLE4 Holliday junction DNA helicase RuvA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLE4_9FIRM Length = 201 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 6/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG ++G IE GG+GY V + ++ G + T+ VREDA LL Sbjct: 1 MIGYIKGKATVVSKEFCFIEAGGIGYRVFISEMSRQKI-HLGAPVRLLTYMAVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF LI + +GPK+A+ ILS M FV ++ + L KLPG+GKKT Sbjct: 60 YGFLTQEEYDLFLILISVSKIGPKVAMGILSVMEPADFVLSIRNRNLSVLTKLPGVGKKT 119 Query: 121 AERLIVEMKDRFKGL-HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERL+VE+KD+ GD+ P + + P +A L ALGY+ E Sbjct: 120 AERLLVELKDKVGDFAEGDIDEPES----LAAGKPDESGIAADAAKYLRALGYEDTEIQP 175 Query: 180 MVSKIARPDASSETLIREALR 200 ++ K++ L+ ALR Sbjct: 176 VLKKLSIEYKDVSPLVSAALR 196 >UniRef50_C3XJP3 Holliday junction DNA helicase motor protein n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XJP3_9HELI Length = 193 Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI L G I K+P + ++ GV YEV + + ++ G++ + T ++REDAQ+ Sbjct: 1 MIIALEGEIFLKEPTRLGLKCTGVVYEVFISLQTSQQIQANIGEKLALHTTQIIREDAQM 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+TLF+ LIK NGVGPK+A+AILS + Q F VE ++ ++ ++PGIG K Sbjct: 61 LFGFLELLEKTLFERLIKINGVGPKVAMAILSTYTPQTFAKVVESNDIKSMQRVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R++VE+ + DLV + D Q+ + AL +LGYK +R Sbjct: 121 SAGRILVELSGW-----------SLDLVQGESLNVKKDSNLQQVILALESLGYKNDVIAR 169 Query: 180 MVSKIARPDASSETLIREALR 200 + + + S+ +++ AL+ Sbjct: 170 VTKGLENDEVSA--MVKAALK 188 >UniRef50_C5VM52 Holliday junction DNA helicase RuvA n=5 Tax=Bacteroidales RepID=C5VM52_9BACT Length = 205 Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 119/210 (56%), Gaps = 18/210 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVV----RE 55 MI +RG + + P L ++E GVGY +++ + + + G+ A+ ++ H + R+ Sbjct: 1 MIEYIRGELADLTPALAVVEAHGVGYALNISLNTYSAIQ--GKTAVKLYVHEAIMTGGRD 58 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 D LYGF NKQER+L++ LI +GVG A ILS ++ + N + + L + G Sbjct: 59 DNYTLYGFANKQERSLYRLLITVSGVGANTARMILSSLTPAELCNVIANGDEKMLKTVKG 118 Query: 116 IGKKTAERLIVEMKDRF--KGLHGDLFTPAADLVLTSPASPATDDA-EQEAVAALVALGY 172 IG +TA+R+IV++KD+ G+ +L V + P +PA + A + EAV+AL LG+ Sbjct: 119 IGLRTAQRIIVDLKDKIMQSGIADELH------VSSQPNTPAVNAAIKDEAVSALTMLGF 172 Query: 173 KPQEASRMVSKI--ARPDASSETLIREALR 200 P ++++V I +PD E +++ AL+ Sbjct: 173 SPAPSAKVVVSILTEQPDLPVEQVVKLALK 202 >UniRef50_C0YLR6 Crossover junction endonuclease RuvA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YLR6_9FLAO Length = 194 Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+GI+ E P +I V GVGY V + + L Q+ +F ++REDA LL Sbjct: 1 MIFSLQGIVQELTPTYAVINVQGVGYYVGISLMTSQTLV-LNQQTFLFIQQIIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GFN + E+ +F LI NGVG AL +LS +S + +A+ + K GIG KT Sbjct: 60 FGFNTRSEKEMFNLLISVNGVGAVSALILLSTLSLDEIASAILSGNSALIQKAKGIGAKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA-EQEAVAALVALGYKPQEASR 179 AER+IV++KD+ + + D P A++ S D+ ++E+++AL LG + + + Sbjct: 120 AERIIVDLKDKVQK-YSD---PNANI------SVMVDNKIKEESLSALEVLGIPKRTSEK 169 Query: 180 MVSKIAR--PDASSETLIREALR 200 + KI + P S E L+++ L+ Sbjct: 170 IADKIIKQNPSISVEELVKQILK 192 >UniRef50_A0LUK6 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Actinomycetales RepID=RUVA_ACIC1 Length = 196 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 17/205 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEV-HMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G + P V++EVGG G ++ P T G+ A T VVRED+ Sbjct: 1 MISFVSGRVAAVTPDSVIVEVGGFGVQLLATPATIAR--ARVGERARFATSLVVREDSLT 58 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ERT+F+ L +GVGP+LALA+L S AV E+V AL +PGIG+K Sbjct: 59 LYGFADDDERTVFELLQTASGVGPRLALAMLGVHSPTALRAAVATEDVKALALVPGIGRK 118 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+R+I+E+KDR L TP ++ A+ +T A L+ LGY ++A Sbjct: 119 TAQRIILELKDR-------LGTP------STAAAESTSGWRDAVHAGLLNLGYTARQADE 165 Query: 180 MVSKIA-RPDASSETLIREALRAAL 203 ++ IA D S+ ALR AL Sbjct: 166 AIAAIAGELDDSAAVDTATALRLAL 190 >UniRef50_C7M5Z6 Holliday junction DNA helicase RuvA n=2 Tax=Capnocytophaga RepID=C7M5Z6_CAPOD Length = 194 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G ++EK V+I+ GVGY V++ + + LPE G+ ++T+ ++EDA L Sbjct: 1 MITQLQGKLVEKNSTHVVIDCHGVGYFVNISLNTYSALPE-GEAIKLYTYLQIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ER +F L+ +GVG A +LS ++A Q NA+ +V + + GIG KT Sbjct: 60 YGFLTKAEREVFVLLLSVSGVGASTARTMLSALTAAQVRNAIINGDVATIQAVKGIGAKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++++KD+ L P A ++EA+AAL LG+ ++A ++ Sbjct: 120 AQRVVLDLKDKMLKLQDFEEVPM----------NAVSTHKEEALAALEVLGFMRKQAEKV 169 Query: 181 VSKIAR---PDASSETLIREALR 200 V I + + S E +I++AL+ Sbjct: 170 VDIIIKSSSEELSVEEIIKQALK 192 >UniRef50_A7I4H5 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I4H5_METB6 Length = 201 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G V+++V G+GY VH+P E+ AG + + T+ VREDA L Sbjct: 1 MIAYLEGTPAATGDRWVVLDVNGIGYRVHVPEPEVREIAGAGTKVKLHTYMAVREDAITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E LF +I +G+GP++AL ILS +S + FV A+ + +L ++ GIG K Sbjct: 61 YGFLHESELELFTVIIGVSGIGPQIALNILSQISLEDFVLAILSGDEKSLTRISGIGPKG 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E++D+ K + D + +PA D ++A +ALV+LG+ + Sbjct: 121 AKRLILELRDKMKKVQ--------DAMTHTPAGR-QDATLRDAASALVSLGFAEAASYDA 171 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ AR A+ ++E ++AAL Sbjct: 172 VASAARGLAAPT--VQEIVKAAL 192 >UniRef50_D1PT53 Crossover junction endoribonuclease subunit A n=6 Tax=Prevotella RepID=D1PT53_9BACT Length = 206 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/209 (31%), Positives = 118/209 (56%), Gaps = 15/209 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVV----RE 55 MI ++G + E P L ++E GG+GY + + + + ++ G++A+ ++ H + R+ Sbjct: 1 MIEYIQGELTELTPALAVVETGGIGYALSISLNTYDDIQ--GKKAVKLYVHEAIQTGGRD 58 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 D LYGF +KQER L++ LI +GVG A +LS ++ ++ NA+ + + G Sbjct: 59 DNYTLYGFASKQERELYRMLITVSGVGANTARTMLSSLTPKELCNAIANGNEKLIKSVKG 118 Query: 116 IGKKTAERLIVEMKDRF--KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYK 173 IG KTA+R+IV+++D+ G+ L D +++ + D EAV+AL LG+ Sbjct: 119 IGLKTAQRVIVDLRDKIVSSGIAEVLHAGTPDTKVSAVNTAVKD----EAVSALTMLGFS 174 Query: 174 PQEASRMVSKI--ARPDASSETLIREALR 200 P A++ V+ I +PD E +++EAL+ Sbjct: 175 PAPATKTVTAILTEQPDMVVEMVVKEALK 203 >UniRef50_Q4JVD8 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Corynebacterium RepID=RUVA_CORJK Length = 211 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 110/217 (50%), Gaps = 24/217 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +I+K V IE GVGY+ T ELP G+E V T VVRED+Q L Sbjct: 1 MIASLRGTVIDKGLDYVTIECAGVGYQCSGTATTIAELPR-GEEVFVTTALVVREDSQTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F + E+ F L +GVG +LALAILS ++ Q+ AV + L + PG+GK+ Sbjct: 60 YVFKDADEKRAFATLQSVSGVGARLALAILSVITPQELARAVSNGDHKTLQRAPGVGKRL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVA---------ALVALG 171 AER+ V++K + L G++ AD A D + +AVA ALV LG Sbjct: 120 AERMAVDLKGKVADL-GEI----ADTGAVGAAGAVGDGGDGQAVAPDVREQVLEALVGLG 174 Query: 172 YKPQEASRMVSKIAR-------PDASSETLIREALRA 201 + +A + + PDAS L+R +L A Sbjct: 175 FTESKAGTTIEAVLSQWSAPQAPDASG--LLRASLAA 209 >UniRef50_C6C065 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfovibrio RepID=RUVA_DESAD Length = 203 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 13/205 (6%) Query: 1 MIGRLRGIIIE-KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G ++E +++ GGVGYE+ + ++ LPE+G + + H V+REDA Sbjct: 1 MIAYIHGKLLEATDKSCIILTPGGVGYELFLTLSAISTLPESGSDVTFYVHSVIREDAFD 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +R +F+ LI + +GPK ALAILS + + V RE+V L +PGIG K Sbjct: 61 LYGFPCFDDREVFRTLISVDRLGPKKALAILSQFGPKDLQDLVFREDVKTLSIVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQ--EAVAALVALGYKPQEA 177 +A +++ +KD+ + L + S A P D + +A++ L LGY E Sbjct: 121 SARQILWSLKDKMETLKS--------ATVRSGACPVEGDRSEFLDALSGLRNLGYGDDEV 172 Query: 178 SRMVSKI--ARPDASSETLIREALR 200 + I PD + IR AL+ Sbjct: 173 RDFLKDIFDEEPDLDAGGAIRVALK 197 >UniRef50_A6Q8H2 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Epsilonproteobacteria RepID=RUVA_SULNB Length = 185 Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 20/200 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ + P + + V G+ YE+ + + + E + +F V+REDA LL Sbjct: 1 MIVGMEGIVERRDPTFIHLNVNGIIYEIQVSINTSNAIQE--KRVKLFITQVIREDADLL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F ++K NGVGPK+ LAI S + + F V ++V L ++PGIG K Sbjct: 59 FGFMDTNEKKMFDTVLKINGVGPKVGLAICSTFTPETFAKVVASKDVSMLKRVPGIGPKA 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE+ AD ++ A+ + A EAV AL +LG+K + Sbjct: 119 ASRILVEL---------------ADFIVDGNAAEGSSGALGEAVMALESLGFKKDAIQKA 163 Query: 181 VSKIARPDASSETLIREALR 200 +S + + TL++E L+ Sbjct: 164 LSGCS---GDTSTLVKEGLK 180 >UniRef50_Q0AX15 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RUVA_SYNWW Length = 199 Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 14/178 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + E++P ++I+V GVGYEV++ F LP+ G+ ++ T V E+ L Sbjct: 1 MIAFLKGAVFERRPDSIIIDVNGVGYEVNIHSRLFPRLPQRGEPILIHTFLQVLENEFKL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ E LFK L+ +G+G K ALA+LS M F A+ ++ LV++PG+GKKT Sbjct: 61 FGFLDQDELRLFKTLLTVSGIGSKGALAVLSTMEPLVFYRAIASQDEKTLVRIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLV-LTSPASPATDDAEQEAVAALVALGYKPQEA 177 A+R+I E++D+ P LV + P D E + AL LGY E Sbjct: 121 AQRMIFELQDK---------VPELKLVEVEKEQRPLLD----ELMEALEILGYSRSEV 165 >UniRef50_UPI0001C338F3 Holliday junction DNA helicase, RuvA subunit n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C338F3 Length = 213 Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 61/210 (29%), Positives = 115/210 (54%), Gaps = 16/210 (7%) Query: 1 MIGRLRGIIIE-----KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVR 54 MI +G +E K ++++EV +GYE+ + +L + I VF H R Sbjct: 1 MINYFKGSFVEILKDTKNKIVLIMEVNQIGYEIQITSKLEEKLSNKKSDYIQVFIHLQTR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 ED+Q+LYGF NK E+ LF++LI NG+G +L++ +L+ + +++ + AV V L + P Sbjct: 61 EDSQILYGFINKLEQELFRQLININGIGAQLSITLLNTLGSEKLIKAVCSGNVKMLSESP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+GKKTAER+I+E+ + L A ++ + + ++++ ++ ++L+ LGY Sbjct: 121 GVGKKTAERIILELNSKLLKL-----IEAFEIKVELHSCNSSENTLEDITSSLLLLGYDR 175 Query: 175 QEASRMV-----SKIARPDASSETLIREAL 199 + R+ ++ ++E L+R A+ Sbjct: 176 EGVDRVTVYLKNNQFLSKQINTEELLRTAI 205 >UniRef50_B9L9P0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Nautilia profundicola AmH RepID=RUVA_NAUPA Length = 184 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 114/200 (57%), Gaps = 23/200 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I EK +L++V V YE+++ M F + + G + + +++E+ L Sbjct: 1 MIAALRGNIFEKDGGKILLDVNNVIYELNVSMITFSSVNDKG---LFYITEIIKENEYTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K E+ LF LIK NGVGPK+ALAI S + Q F++ + ++ AL K+PGIG K+ Sbjct: 58 YGFADKNEKKLFDSLIKLNGVGPKVALAICSTYTPQTFMDIIANHDINALKKIPGIGPKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++EM + F+ V+ +P + +A++AL +LG+ + + Sbjct: 118 AKRILMEMGE-FE-------------VVFEEQNPVFN----QALSALESLGFNKNDIVKA 159 Query: 181 VSKIARPDASSETLIREALR 200 ++ I + D ET I+ AL+ Sbjct: 160 LNGI-KSDNLEET-IKLALK 177 >UniRef50_C5EYK8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Helicobacter RepID=C5EYK8_9HELI Length = 192 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 15/175 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 MI L+G I K+P + I+ GV YEV + + ++ + G+ + T ++REDAQ+ Sbjct: 1 MIIALQGEIFFKEPTRIAIKCAGVIYEVFISLQTSNQITQTKGENLTLLTTHIIREDAQI 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+ LF LIK NGVGPK+A+AILS + Q F VE ++ ++ ++PGIG K Sbjct: 61 LFGFLENNEKKLFDTLIKINGVGPKVAMAILSTYTPQTFAKVVESNDIKSMQRVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE-QEAVAALVALGYK 173 +A R++VE+ L L+ +D+ + V AL +LGYK Sbjct: 121 SAGRILVEL-------------SGWSLELSQTNQTIKEDSTLHQVVLALESLGYK 162 >UniRef50_B9KYT2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RUVA_THERP Length = 191 Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 15/177 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG ++ K+ VL++V GV + V T EL E G + TH +VRED L Sbjct: 1 MIRGVRGTLVAKRSGEVLVDVQGVTFRVQTSATTLQELGEPGDLVSLVTHLIVREDELAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E LF L+ +GVGP+ AL +LS + + + E + L + PGIGKKT Sbjct: 61 YGFATEAELELFLSLLAVSGVGPRGALNLLSLAAPDRLTEWIRGERIEELARAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 A R+++E++ R L A + +QE VAAL ALGY QEA Sbjct: 121 ASRIVLELRGRLPALT---------------EVQAGEPIDQELVAALQALGYTAQEA 162 >UniRef50_C6X0H6 Holliday junction DNA helicase RuvA n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0H6_FLAB3 Length = 255 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 18/205 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + E P V+I+V GVGY V + + +L G+E + ++REDA LL Sbjct: 62 MIYSLKGNVQELNPTSVIIDVNGVGYYVGVSLQTSEKLV-LGKETFLNIQQIIREDAHLL 120 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GFN E+ LF LI NGVGP AL +LS +S Q+ +A+ L K+ GIG KT Sbjct: 121 FGFNTISEKELFNLLISVNGVGPVSALIMLSSLSLQEIASAILSGNSLLLQKVKGIGTKT 180 Query: 121 AERLIVEMKDRFKGLH---GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AER+IV+++D+ + + G++ ++ + + EA++AL LG + + Sbjct: 181 AERIIVDLRDKVQKFNISEGNI------------SNFVNNKVKDEALSALEVLGIPKKMS 228 Query: 178 SRMVSKIARPDA--SSETLIREALR 200 ++ + + +A S E L+++ L+ Sbjct: 229 EKIADRFLKTNADLSVEDLVKQILK 253 >UniRef50_D1CDK2 Holliday junction DNA helicase RuvA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDK2_THET1 Length = 192 Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 105/203 (51%), Gaps = 17/203 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I K ++++VGGVG V P + E+ E G E + TH +VREDA L Sbjct: 1 MIASIKGHIEYKLNDGLIVQVGGVGLRVFTPSSMVREIGEIGDEVYLHTHLMVREDALTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +++ LF+ LI GVGP AL ILS S ++ A+ +E +P IGKK Sbjct: 61 YGFSTREQLRLFELLISVTGVGPNHALNILSSASVEEIQTAIAQENAQFFSLIPRIGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K + + P+ + A ++E V+AL+ALGY EA Sbjct: 121 AARIILELKGKVE--------PSGE------AVQIISHKDEELVSALLALGYTLGEAQAA 166 Query: 181 VSKIARPDASSETLIREALRAAL 203 V + E + E LR AL Sbjct: 167 VRSLP---TDKELPMEEKLRLAL 186 >UniRef50_C1Q8J8 Holliday junction DNA helicase subunit RuvA n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q8J8_9SPIR Length = 194 Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 103/181 (56%), Gaps = 15/181 (8%) Query: 22 GGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG 80 GVGYE+ + +L + I ++T + +EDA +LYGF ++E+ +F LI +G Sbjct: 22 NGVGYEIIVSK----KLEVKNDDKIRLYTQLIHKEDAMILYGFLTREEKKMFSTLIAASG 77 Query: 81 VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLF 140 VGPKLA+ ILS S ++ + +++ L K+ G+G K AE+L+ E++D+ + + Sbjct: 78 VGPKLAMEILSTYSINDLMHILFNKDINLLKKVQGMGLKKAEKLLFELRDKIEKI----- 132 Query: 141 TPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDA-SSETLIREAL 199 D+ ++S + +D E + + AL++LG+ EA + +S I D S+E LI AL Sbjct: 133 ----DINISSSSVQNYNDNESDVIKALISLGFSNNEAVKALSSIENKDNMSAEDLISNAL 188 Query: 200 R 200 R Sbjct: 189 R 189 >UniRef50_Q7VCI6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Prochlorococcus marinus RepID=RUVA_PROMA Length = 222 Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 9/183 (4%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI L G+ IE VLI GVGYEV + +L +E I++ H V RED Sbjct: 1 MISWLNGLKIEIWENGTRKGVLISCSGVGYEVQLLSR-SLQLLNTSKELILWVHEVHRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L GF NK ER LF++LI +GVGP+LA+++L A+Q ++A+ ++++ L PG+ Sbjct: 60 GSQLIGFLNKLERDLFRKLISVSGVGPQLAISLLEKNPAEQLISAITKKKIAQLTSCPGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GKKTAERL++E++++ L G + + + D E + L+ L YK E Sbjct: 120 GKKTAERLVIELQNKLSDLIGSSLKKTNNHLELEYETNVAD----EVRSTLLNLDYKNSE 175 Query: 177 ASR 179 + Sbjct: 176 IEK 178 >UniRef50_D0GJ52 Holliday junction DNA helicase RuvA n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GJ52_9FUSO Length = 213 Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 9/198 (4%) Query: 12 KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTL 71 K+ V +++ G+ Y++ + + F L E GQ+ ++ H V+ED YGF + ER L Sbjct: 12 KKIDYVALDINGLAYKIFISLKTFEALGETGQDEKLYVHTHVKEDDISFYGFKTENEREL 71 Query: 72 FKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDR 131 FK LI T+GVGPKL LAILS + + +N V K+PG+G K A+++I+++KD+ Sbjct: 72 FKALISTSGVGPKLGLAILSTYNVKDVINIVIESNSKLFTKVPGLGDKKAQKIILDLKDK 131 Query: 132 FKGLH-GDLFTPAADLVLTSPASPATDDA-----EQEAVAALVALGYKPQEASRMVSKIA 185 K L+ + + ++ +P T + +++ AL +LGY + S+ I Sbjct: 132 VKKLNIIETYNENGEISKGNPIVSDTSNTKILLMKEDIKLALESLGYLNADVSKW---IK 188 Query: 186 RPDASSETLIREALRAAL 203 + S I EA+++ L Sbjct: 189 DEELSQINDIGEAIKSIL 206 >UniRef50_D1VUW2 Holliday junction DNA helicase RuvA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUW2_9FIRM Length = 198 Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I E ++++ +GY + + +L +E ++ ++RED L Sbjct: 1 MLDFIKGNISEIYEGEIVLDNNDIGYLISISQLDISKLS-LNEELKIYLRLILREDNISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK RTLF L + VGPKL++ IL + + Q +A+ E+ L K PG+GKKT Sbjct: 60 YGFLNKDSRTLFDLLNTVSSVGPKLSMTILGALGSSQLRSAILSEDANILTKSPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ FT DL + +S D A+ AL++LGY EA Sbjct: 120 ANRIILELKDKISKKS---FTEDLDLSIL-DSSDTIDINNDPALEALLSLGYNEYEAKIA 175 Query: 181 VSKIARPDASSETLIREALR 200 + + + SE +IR+AL+ Sbjct: 176 LRNVDQNQELSE-IIRQALK 194 >UniRef50_A5IKQ6 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Thermotoga RepID=RUVA_THEP1 Length = 188 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 23/203 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G +++K ++L+E GV +E+ + E+ E G E + T V +D Sbjct: 1 MIAGISGRVLKKSGNVLLVETKSGVVFEIVCDVQTSEEVEEGG-ECFLHTFLSVSQDGIT 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+N++++ LF L K + +GPK AL I+S A+ V + ++V L KLPGI KK Sbjct: 60 LYGFSNERKKELFLSLTKVSRLGPKTALKIISNEDAETLVTMIASQDVEGLSKLPGISKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE--QEAVAALVALGYKPQEA 177 TAER+++E+KD F+ S D E++ AL++LGY ++A Sbjct: 120 TAERIVMELKDEFE-------------------SAGIKDMRIYHESLEALISLGYPEKQA 160 Query: 178 SRMVSKIARPDASSETLIREALR 200 V + R + LI+EAL+ Sbjct: 161 REAVKHVYREGMKTSELIKEALK 183 >UniRef50_B2S3D5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Treponema RepID=RUVA_TREPS Length = 227 Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 32/201 (15%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + GI+ + + +EV G+ +E+ + E G VFT REDA L Sbjct: 1 MFESISGILTLHERERLCVEVHGIEWEIAVSAYSSAAFGEVGSHVKVFTWLYHREDALRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+N QERTLF L K G+GPK AL +LS +S+Q A++ ++ AL ++PGIGKKT Sbjct: 61 FGFSNVQERTLFLSLTKVEGIGPKQALKVLSSISSQALCAALDTGDLCALQRIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA---TDDAE---------------QE 162 A+R+++ +K L LT AS A TDD ++ Sbjct: 121 AQRMLLALK--------------GTLALTDAASCAQSQTDDRAAHPSNLGCAPHAREIED 166 Query: 163 AVAALVALGYKPQEASRMVSK 183 V ALV +GY + A+ ++++ Sbjct: 167 LVTALVQMGYDRKMAAEVIAQ 187 >UniRef50_C9MZD4 Holliday junction DNA helicase RuvA n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MZD4_9FUSO Length = 211 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 105/190 (55%), Gaps = 10/190 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y+V++ + F +L G + ++ + V+ED L Sbjct: 1 MFEYISGKLTIKKIDYVALDINGLAYKVYVSLKTFEKLDNIGNDEKLYVYTNVKEDDISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI +GVGPKL +AILS + ++ ++ V E ++PG+G K Sbjct: 61 YGFKTQNERELFKALISISGVGPKLGIAILSTFNTREIIDIVNENESKIFTRVPGLGIKK 120 Query: 121 AERLIVEMKDRFKGLH--------GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGY 172 A+++I+++KD+ K L D+ + L+ ++ ++P +++ AL +LGY Sbjct: 121 AQKIILDLKDKVKKLDLTETIEEISDI--SSGKLITSNTSNPKLLLMKEDLKLALESLGY 178 Query: 173 KPQEASRMVS 182 + S+ ++ Sbjct: 179 INSDVSKWIT 188 >UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Thermosipho RepID=RUVA_THEM4 Length = 189 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 110/200 (55%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G++ + + + + V + YE+ + T ++E ++ VFT +V +D L Sbjct: 1 MIYAMYGVLEDIENGKLYLNVNEIVYEIVVGDTGYFE-DFLNEKIKVFTKMIVNDDEISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + LF++LI N +GPK AL I++ V+A+ E+V L LPGIG KT Sbjct: 60 YGFSDVLKLKLFEKLILVNKLGPKSALKIITSSDVSYIVSAIVNEDVKTLSTLPGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD K D+ LT D EA+ ALV LG+ ++ + Sbjct: 120 AERIILELKDSMKEF---------DVTLTEK-----DKKILEAIEALVTLGFSRNQSKKA 165 Query: 181 VSKIARPDASSETLIREALR 200 V++I + D S + +I++AL+ Sbjct: 166 VTQILKKDDSLDDIIKKALK 185 >UniRef50_B1X417 Putative holliday junction DNA helicase RuvA n=1 Tax=Paulinella chromatophora RepID=B1X417_PAUCH Length = 215 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 14/210 (6%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI LRG +++ + L+ GG+GYEV++ + +LP+ + ++ H +VRE Sbjct: 1 MISWLRGELLKSWQQGTYNVALLNCGGIGYEVYLNRRDWEDLPKTREILELYIHMLVREK 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF +R +F+E+I NG+GP+LALA+ + + + + A+ ++ L K GI Sbjct: 61 QWTLYGFIEFDDRDIFREIININGIGPQLALALQTELRGPRLIEAIINGDLVTLTKAHGI 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE--QEAVAALVALGYKP 174 G++TAERL E++ RF L+ T L +D++ + L LGY Sbjct: 121 GRRTAERLSTELRSRFVNLY---HTNEVYLKQEGSIQGVLNDSDLVHDIQNTLKTLGYNK 177 Query: 175 QEASRMVSKIARP-----DASSETLIREAL 199 E R ++K+ ++ + +REAL Sbjct: 178 LEIQRAINKLKSKSSLVENSDFDVWLREAL 207 >UniRef50_B8ZUI1 Holliday junction ATP-dependent DNA helicase ruvA n=12 Tax=Mycobacterium RepID=RUVA_MYCLB Length = 203 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG ++E +IE G+GY V+ + L + G +A + T VVRED+ L Sbjct: 1 MIFSVRGEVLEVALDHAVIEAAGIGYRVNATPSALATLRQ-GSQARLVTAMVVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + R LF L+ +GVGP+LA+A L+ A A+ +V +L ++PGIGK+ Sbjct: 60 YGFSDAENRDLFLALLSVSGVGPRLAMATLAVHDAAALRQALADSDVASLTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E++D+ P LT + + V ALV LG+ ++A Sbjct: 120 AERIVLELRDKVG--------PVGASGLTVGTAADGNAVRGSVVEALVGLGFAAKQAEEA 171 Query: 181 VSKIARPDASSETLI--REALRAAL 203 ++ + + + ALRAAL Sbjct: 172 TDQVLDGELGKDGAVATSSALRAAL 196 >UniRef50_D2RLD5 Holliday junction DNA helicase RuvA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLD5_ACIFE Length = 204 Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 28/213 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG + G + L++ GVGY + + + + Q+ ++T+ VREDA L Sbjct: 1 MIGFITGRVDHIGTNFCLVDTQGVGYRIFLNTGDLSRI-QVDQKVKIYTYLSVREDALQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +LF +LI +G+GPK+A ILS F AV+ ++ L KLPGIGKKT Sbjct: 60 FGFLSYDAYSLFTQLITVSGIGPKVAQGILSAAKVDAFYLAVKSRDLKFLTKLPGIGKKT 119 Query: 121 AERLIVEMKDRF-----------KGLHGDLFTPAADLVLTSPASPATDDAEQEAVA-ALV 168 AERL++E+KD G GD+ P D AVA L Sbjct: 120 AERLLLELKDMTGPEGLEEEGTAGGFDGDV--------------PEDDTTTLGAVAEGLS 165 Query: 169 ALGYKPQEASRMVSKI-ARPDASSETLIREALR 200 LGY E ++++ K+ D+ +E L++EALR Sbjct: 166 YLGYTQGEIAQVLKKLKVTADSRAEDLLKEALR 198 >UniRef50_Q8YZT2 Holliday junction ATP-dependent DNA helicase ruvA n=20 Tax=Cyanobacteria RepID=RUVA_ANASP Length = 213 Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 17/209 (8%) Query: 1 MIGRLRGII-----IEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MI L+GI+ + ++ +EV G+GY++ +P +LP G +FTH+ VRE Sbjct: 1 MISYLKGIVAGIQNVGSNRVILTLEVNGMGYDLQIPQRLAKQLPTTGDLVQIFTHYQVRE 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 + LLYGF++ ER LF+ L+ +GVG A+A+L + V A+ V L++ PG Sbjct: 61 EIPLLYGFSSPAERDLFRHLLSVSGVGAASAIALLDTLELPDLVQAIIAANVQILIQAPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 +GKK AER+ +E+K + + A V T +P +E L ALGY Sbjct: 121 VGKKIAERVCLELKAKLI----EWRKSAGFFVATEGPAPGI---LEEVQMTLFALGYTAH 173 Query: 176 EASRMVSKIAR-----PDASSETLIREAL 199 E S + ++ DA E I++A+ Sbjct: 174 EVSHALHVVSEDIGLPKDAYVEDWIKQAI 202 >UniRef50_D1C4E7 Holliday junction DNA helicase RuvA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4E7_SPHTD Length = 193 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 80/131 (61%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG I K P +VLI++ G+ V T +L E G A ++TH VRED L Sbjct: 1 MISGVRGPIHAKYPGIVLIDLHGLIIRVLTSQTTVDDLGEVGDHAELYTHLRVREDDITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E LF+ L GVGP++AL ILS ++ +E E++ AL ++PGIGKKT Sbjct: 61 YGFSTPEELQLFELLTSVTGVGPRVALNILSSARPEEVHRVIESEDIAALSRVPGIGKKT 120 Query: 121 AERLIVEMKDR 131 A R+I+E++ + Sbjct: 121 ASRIILELRGK 131 >UniRef50_Q2RVF6 Holliday junction ATP-dependent DNA helicase ruvA n=27 Tax=Alphaproteobacteria RepID=RUVA_RHORT Length = 212 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 102/205 (49%), Gaps = 5/205 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G++ +I+VGGVGY V P LP GQ + VRED L Sbjct: 1 MIAKLKGLVDSVAEDHAVIDVGGVGYLVFCPARVLTRLPSPGQAVALVVETQVREDHISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L GVG K+AL++LS +SA Q A+ + AL + PG+G K Sbjct: 61 FGFLETAERDWFRLLSTVQGVGSKVALSVLSVLSAGQISQAIAAGDKAALGRAPGVGPKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTP----AADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 A R+ E+KD+ L G P D P T D +AV+ALV LGY E Sbjct: 121 AARIASELKDKAVALGGMPAPPPRGAGTDAAGEGPPGGPTGDVLGDAVSALVNLGYGRSE 180 Query: 177 ASRMVSKIARPDASS-ETLIREALR 200 A S+ A A++ + +I ALR Sbjct: 181 AVGAASRAAGLGATTVQGVIGLALR 205 >UniRef50_B0S1J4 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Finegoldia magna RepID=RUVA_FINM2 Length = 198 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 110/201 (54%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G+I E +++E +GY++ + F + A E V+T FV REDA +L Sbjct: 1 MYSYIIGVITEVHENYIVLENNNIGYKIFIT-DFFRDNVSAFDEYKVYTEFVEREDASIL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++ER LF L +GPK A+ ILS M+ + A+ +++ L + PG+GKKT Sbjct: 60 YGFSSQKERELFNLLTDVTSIGPKYAMNILSTMTVDECKTAIITDDIKLLTQAPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K++ + D F P+ V + ++D+E A AL+ LGY + Sbjct: 120 ASRIILELKEK---IEKD-FVPSEKPV--NKEVKRSNDSEF-AREALLQLGYFKNDVDAF 172 Query: 181 VSKIARPDASSETLIREALRA 201 + S E ++++A+++ Sbjct: 173 IENTDISGLSIEDIMKKAMKS 193 >UniRef50_B4R9Z1 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Caulobacteraceae RepID=RUVA_PHEZH Length = 204 Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 102/210 (48%), Gaps = 20/210 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL- 59 MIGRLRG++ E LI+V GVGY V LP G+E ++ V E + Sbjct: 1 MIGRLRGLVAEVGEEDALIDVMGVGYVVRCGSRTLSRLPAVGEETVIHVESVFGEQTGVT 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L GVGPK ALA+L ++ + AV RE+ A+ + G+G K Sbjct: 61 LYGFLGRDERRAFVTLRTIQGVGPKAALAVLDVLAPPELAAAVAREDKAAVARANGVGPK 120 Query: 120 TAERLIVEMKDR------FKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYK 173 A+R++VE+KD+ H TP P A EAVAAL+ LG Sbjct: 121 LAQRIVVELKDKPISDGPVAAFHAQATTP----------QPIKVSAAGEAVAALMGLGIA 170 Query: 174 PQEASRMVSKIA---RPDASSETLIREALR 200 +A R+V A +A LI+ AL+ Sbjct: 171 EPQARRVVESAALRLGEEAEPPALIKAALQ 200 >UniRef50_B2GB19 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Lactobacillus RepID=RUVA_LACF3 Length = 200 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 68/181 (37%), Positives = 105/181 (58%), Gaps = 8/181 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVREDAQL 59 M L G+I P ++++V GVGY V + Y+ E Q+A+ VF + V+EDA Sbjct: 1 MFEYLTGLITMVSPDFIVVDVNGVGYRVAVANPYAYQ--EDDQQAVQVFIYQAVKEDAIT 58 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + E+ LF +LI +G+GPK ALAIL+ Q ++A++ + L K PGIGKK Sbjct: 59 LFGFATQAEKRLFTQLIGVSGIGPKSALAILATPDHQGLIDAIQNGDDKYLSKFPGIGKK 118 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA R+I+E+KD+ + ++ L T+P A Q+A+AAL +LGY ++ R Sbjct: 119 TASRIIIELKDKVVAVQDEV-----QLDFTAPGPLGPSAALQDALAALESLGYTTKQVER 173 Query: 180 M 180 + Sbjct: 174 V 174 >UniRef50_A9NF61 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Acholeplasma laidlawii PG-8A RepID=RUVA_ACHLI Length = 186 Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++GI+ + P +++E GVGY V P+ Y++ G+E V T+ VRED L Sbjct: 1 MYRYIKGIVTQINPQHIVVENNGVGYLVLSPVPYQYKI---GEETTVVTYLHVREDIFQL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF +LI +G+GPK A++I++ + + A+E + L K PGIG K+ Sbjct: 58 YGFKDEETLNLFLKLISVSGIGPKSAMSIVAFDDTNKIIAAIETSDAKYLTKFPGIGMKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K G L D+ L S D ++ AAL ALGY +E ++ Sbjct: 118 AQQIILDLK-------GKLVNDELDMQLLS-------DNSKDVAAALEALGYNKKEIAKS 163 Query: 181 VSKIARPDASSETLIREAL 199 + + D ++EAL Sbjct: 164 LKHV-NFDQDLNKALKEAL 181 >UniRef50_C0QZY1 Holliday junction DNA helicase RuvA n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QZY1_BRAHW Length = 192 Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 17/181 (9%) Query: 22 GGVGYEVHMPMTCFYELPEAGQEAI-VFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG 80 GVGYE+ + +L + I ++T + REDA +LYGF ++E+ +F L+ +G Sbjct: 22 NGVGYEIIVS----KKLDVKNDDNIRLYTKLIHREDAMILYGFLTREEKNMFTTLMSASG 77 Query: 81 VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLF 140 VGPKLA+ +LS S ++ + +++ L K+ G+G K AE+L+ E++D+ + + ++ Sbjct: 78 VGPKLAMEVLSTYSINDLMHILFNKDINLLKKVSGMGVKKAEKLLFELRDKIEKIDINI- 136 Query: 141 TPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPD-ASSETLIREAL 199 SP S ++D E + + AL++LG+ EA + +S I D ++E LI AL Sbjct: 137 ---------SP-SVISNDNESDVIKALISLGFSNNEAVKALSAIENKDNMTTEDLISNAL 186 Query: 200 R 200 R Sbjct: 187 R 187 >UniRef50_A5CEJ4 Holliday junction ATP-dependent DNA helicase ruvA n=17 Tax=Rickettsieae RepID=RUVA_ORITB Length = 205 Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI +L+GI+ ++I++ GVGY+V+ +L E G +F VRED Sbjct: 1 MIAKLKGILDSITDSYLIIDINGVGYQVYSSGKTLMKLIKEEGSIVSLFIETHVREDRIH 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + E+ F L +G+G K+AL ILS ++ Q A+ + L + G+G K Sbjct: 61 LFGFLDNTEKVAFNMLQSVSGIGTKMALHILSNLTPHQLQIAISSQNRHQLKAISGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +RL++E++D+ + + L + S S D+ +A+ AL+ALG EA++ Sbjct: 121 LIDRLMIELRDKVANI--NTIANNTSLAILSTDSNTHDNILSDAITALIALGISRAEATQ 178 Query: 180 MVSKIAR--PDASSETLIREALR 200 ++S I P S L+R AL+ Sbjct: 179 ILSDIYALFPSISVNELVRTALQ 201 >UniRef50_A8RC90 Putative uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=A8RC90_9FIRM Length = 193 Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 17/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++GII ++IE G+GY +++ L E I++T+ VREDA L Sbjct: 1 MIAFIKGIIHSYSNDSLIIENNGIGYRIYISNPQSVRL---NSEVILYTYQHVREDAITL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E LF +LI GVGPK ALA+L+ +Q + A+E +V L LPGIG K+ Sbjct: 58 FGFTTMEEHDLFLQLISVKGVGPKTALAMLAVCPVKQMIEAIEHNDVKLLKSLPGIGAKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K G L +++ + A +A+ AL ALGYK E + + Sbjct: 118 ASQIVLDLK-------GKLVEEVSEIQVKENAELV------DAIEALKALGYKNAEINSI 164 Query: 181 VSKIARPD-ASSETLIREAL 199 +++ A+S+ IR+AL Sbjct: 165 KKELSEESFATSDQYIRKAL 184 >UniRef50_B1W3G3 Holliday junction ATP-dependent DNA helicase ruvA n=16 Tax=Actinomycetales RepID=RUVA_STRGG Length = 208 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 68/185 (36%), Positives = 96/185 (51%), Gaps = 7/185 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + P +IEVGG+G V +L G+EA + T VVRED+ L Sbjct: 1 MIAFVSGPVAALAPTTAVIEVGGIGMAVQCTPHTLADL-RVGREARLATSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF N ER +F+ L +GVGP+LA A+L+ S AV + AL + GIGKK Sbjct: 60 YGFANDDERQVFELLQTASGVGPRLAQAMLATHSPDALRLAVSTGDEKALTAVSGIGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++L++E+KDR G A + +P T + AAL+ LGY +EA Sbjct: 120 AQKLLLELKDRLGEPVG------AHIGQQGIGTPVTSGWRDQLQAALIGLGYASREADEA 173 Query: 181 VSKIA 185 V+ +A Sbjct: 174 VNAVA 178 >UniRef50_C7NI46 Holliday junction DNA helicase subunit RuvA n=2 Tax=Actinomycetales RepID=C7NI46_KYTSD Length = 209 Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 19/214 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G I +++EVGGVG V +P E+ GQEA + T VVRED+ L Sbjct: 1 MIASLSGTITHVGLDHLVVEVGGVGMRVLVPPQVAAEV-RTGQEARLETSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + R +F+ + +GVGP+LALA+++ +S + AV E++ AL +PGIGKK Sbjct: 60 FGFLDADTREVFETVQSVSGVGPRLALALVAVLSPAELSRAVHTEDLAALTSVPGIGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVA-----ALVALGYKPQ 175 A+RL++E+ + L DL AA T+ A D + A A AL LG+ Sbjct: 120 AQRLVLELVGK---LPADLGGGAAP---TTTEQSAGGDPSEPAWAPQVRDALEGLGWNTA 173 Query: 176 EASRMVSKIARPDASSE-------TLIREALRAA 202 +A++ + A L+REALR A Sbjct: 174 QATKATRTVVEQHAQDTGPPPELPVLLREALREA 207 >UniRef50_C7NC64 Holliday junction DNA helicase RuvA n=2 Tax=Fusobacteriaceae RepID=C7NC64_LEPBD Length = 207 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/172 (30%), Positives = 98/172 (56%), Gaps = 2/172 (1%) Query: 12 KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTL 71 K+ V +++ G+ Y++++ + F ++ ++ H V+ED LYGF + ER L Sbjct: 12 KKIDYVALDINGLAYKIYISLKTFEKMSNIESTEKLYIHTNVKEDNISLYGFKTQNEREL 71 Query: 72 FKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDR 131 FK LI NGVGPKLA+AILS + ++ V+ + E +K+PG+G K A+++I+++KD+ Sbjct: 72 FKALISVNGVGPKLAIAILSTFNTKEIVDIILENEPKIFIKVPGLGIKKAQKIILDLKDK 131 Query: 132 FKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVA-ALVALGYKPQEASRMV 181 K L ++ ++ + + S + +E + AL +LGY + S+ + Sbjct: 132 VKKLEFSEIINENSNTLNGNNISSSEILLMKEDLKLALESLGYADTDVSKWI 183 >UniRef50_A5UZS3 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Chloroflexi (class) RepID=RUVA_ROSS1 Length = 197 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 81/137 (59%), Gaps = 2/137 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGI+I V++E GG+G+ ++ P L + G +FT+ +VRED+ L Sbjct: 1 MIASIRGILIAVAADHVVVETGGIGWMIYAPRPVIAALGDIGATVRLFTYLLVREDSLTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++R LF+ L+ GVGP+ AL +LS + + A+ +V L + P IGKK Sbjct: 61 YGFETVEQRQLFETLLSVTGVGPQAALNLLSSGTTDELRLAIATGDVTRLARTPRIGKKL 120 Query: 121 AERLIVEMKDRF--KGL 135 AERL++E+K + KGL Sbjct: 121 AERLVLELKGKINVKGL 137 >UniRef50_A7VWM3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWM3_9CLOT Length = 168 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 93/172 (54%), Gaps = 11/172 (6%) Query: 32 MTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILS 91 M LP G+EA+++TH VREDA L+GF++ E FK L +GVGPK+ LAILS Sbjct: 1 MNTQRSLPAIGKEAVLYTHMNVREDAVDLFGFSSLAELNCFKLLTSVSGVGPKVGLAILS 60 Query: 92 GMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSP 151 +S +Q AV + L G+G K A+R+I+E+KD+ K L G + V + Sbjct: 61 VLSPEQVAVAVAAGDFKTLTMAQGVGNKLAQRVILELKDKLKALGG------GEEVTAAA 114 Query: 152 ASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDAS--SETLIREALRA 201 EA+ AL LGY P + + +V+K D+S E LIR L+A Sbjct: 115 GVVNAAGNAAEAMNALTVLGYTPSDVAPVVAKF---DSSLPVEELIRLTLKA 163 >UniRef50_B5XJ07 Holliday junction ATP-dependent DNA helicase ruvA n=70 Tax=Streptococcaceae RepID=RUVA_STRPZ Length = 198 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 112/202 (55%), Gaps = 11/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHM--PMTCFYELPEAGQEAIVFTHFVVREDAQ 58 M ++G + + +++E G+GY +++ P + + + Q ++ H V+REDA Sbjct: 1 MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTHSV---NQLVTIYLHQVIREDAH 57 Query: 59 LLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 LL+GF+ + E+ +F +LI +G+GP ALAI++ + VNA++ ++ L+K P IGK Sbjct: 58 LLFGFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGK 117 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTA+++++++ +F + P + ++ A + EA+ AL+ALGY E Sbjct: 118 KTAQQMVLDLAGKF------VEAPQETGHTKARSNKAGNTQLDEAIEALLALGYTATELK 171 Query: 179 RMVSKIARPDASSETLIREALR 200 ++ + ++E I+ AL+ Sbjct: 172 KIRAFFEGTSETAEQYIKSALK 193 >UniRef50_D1AXU1 Holliday junction DNA helicase RuvA n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXU1_STRM9 Length = 200 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 7/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GI+ K V+I++ GVGY+++ + + +L G++ ++ H +V+ED Sbjct: 1 MYEYFEGILSVKNLNYVVIDINGVGYKIYTSIKTYDKLNSIGEKERLYIHTIVKEDDISF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF N+ ER++F E I NG+G K A+AILS ++ + L K+PGIG K Sbjct: 61 FGFKNELERSIFLECIAINGIGAKKAIAILSNFEFEELAAIASSKNFKELAKVPGIGMKK 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+++V++ D+ +GL + + D+V + ++ AL +LGY+ + + Sbjct: 121 AEKIMVDLSDKLEGLKITNSSSSQDIV-------ELYNKKENLRLALESLGYEKVNINNI 173 Query: 181 VSKIARPDASSETLIREAL 199 + + + + LI+ AL Sbjct: 174 IEDKYIKELNMQELIKMAL 192 >UniRef50_Q5NR75 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Zymomonas mobilis RepID=RUVA_ZYMMO Length = 213 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 106/211 (50%), Gaps = 14/211 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL G ++EK +I+V GVGY V + E E V +RED+ L Sbjct: 1 MIARLVGFLVEKNSDSAVIDVNGVGYLVQLSGRALDYFSEIEGEITVHIETQIREDSITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L GVG K ALAIL+ ++ A+ + + + GIG K Sbjct: 61 FGFASYLERDWFRLLTSVQGVGGKAALAILTALTCDAISVAISSGDKTMICRANGIGPKI 120 Query: 121 AERLIVEMKDR------FKGLHGDLFTPAADLVLTSPASPATDDAE--QEAVAALVALGY 172 A+R+I E+K++ F GD ++ PA+ A +AV+AL+ LG+ Sbjct: 121 AQRIINELKEKPAAIALFSSAKGDHLAVED---ISQPAASAHHAGNFMADAVSALLNLGF 177 Query: 173 KPQEASRMV---SKIARPDASSETLIREALR 200 KP EA R+V S+ A+ ++L+R ALR Sbjct: 178 KPAEAQRVVQLASEELGDQATLDSLVRLALR 208 >UniRef50_A8UZA0 Holliday junction resolvasome DNA-binding subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZA0_9AQUI Length = 180 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 105/200 (52%), Gaps = 26/200 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G +IE ++IE G G ++ P ++ ++T+ ++++ L Sbjct: 1 MIDYIKGKVIEVLNDFIVIETGNFGIKIETPHKF------EKKDTKIYTYLTFKDESFRL 54 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++Q R LF +L NG+G K A +IL + + F AVE + L +PGIGKKT Sbjct: 55 FGFKDRQTRELFIKLTSINGIGVKHAFSILKNFNYEDFTLAVENNRIDLLSSVPGIGKKT 114 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K + L+ P +D AV ALV+LG++ ++ ++ Sbjct: 115 ASRIILELKGK----------------LSFSEEPIFND----AVEALVSLGFEKEKVIKI 154 Query: 181 VSKIARPDASSETLIREALR 200 V ++++ S E LI+ +L+ Sbjct: 155 VKELSQKTNSLEELIKLSLQ 174 >UniRef50_C8NZK0 Holliday junction DNA helicase RuvA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZK0_ERYRH Length = 195 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 116/204 (56%), Gaps = 22/204 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPE--AGQEAIVF-THFVVREDA 57 MI + G+ +++ V+++ G+GY+V F PE E+I+F T+ VREDA Sbjct: 1 MIAFISGVAVDRGIDYVVVDNHGIGYQV------FCGNPEMVTLNESIIFHTYQHVREDA 54 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 +L+GF K+E +F++LI GVGPK + ILS S V A+++E++ L KLPG+G Sbjct: 55 IILFGFVEKRELDIFRQLITVKGVGPKTGITILSRFSGDDIVRAIDQEDMAFLKKLPGVG 114 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 K A ++++++K +F + D TP+ T A P D EA+ AL LG+K E Sbjct: 115 PKMASQMMLDLKGKF--IASD--TPST----TKKALPLVD----EALDALGDLGFKKVEL 162 Query: 178 SRMVSKIARPDASS-ETLIREALR 200 + + +++ + S + +I+E L+ Sbjct: 163 NNIKHELSLLNLDSVDDMIKEGLK 186 >UniRef50_C7H8Z7 Holliday junction DNA helicase RuvA n=3 Tax=Ruminococcaceae RepID=C7H8Z7_9FIRM Length = 202 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 112/204 (54%), Gaps = 12/204 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G II+K V++ GGVGY V P + LP G+EA ++T V E+ L Sbjct: 1 MIYSLSGKIIKKTLNAVVVSCGGVGYYVQCPTSVAGALPGVGREATLYTVMSVAENDISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++++ F+ L +GVGPK+ LAILS M + A+ + A G+G K Sbjct: 61 YGFATEEQQSCFELLTAVSGVGPKVGLAILSVMEPDRVALAISAGDHKAFKAASGVGPKL 120 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADL-VLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+R+++E+KD+ KG F +L + + + +A+AALV+LGY EA+ Sbjct: 121 AQRIVLELKDKVAKG-----FVDGINLEDVGAATAAPAAQGAGQAIAALVSLGYSQSEAA 175 Query: 179 RMVSKIARPDAS--SETLIREALR 200 VSKI DAS E +I+ ALR Sbjct: 176 LAVSKI---DASLPVEEIIKLALR 196 >UniRef50_C7LZI9 Holliday junction DNA helicase RuvA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZI9_ACIFD Length = 189 Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 17/201 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + V+I+V GVGYEVH+ + L E ++ +VR DA L Sbjct: 1 MIGWLHGRVASAGRSPVVIDVAGVGYEVHVTAP-WATLLRRDDECELWIRTIVRADAIAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ER F LI +GVGP+LAL IL G+ + A+ E++G L + G+G KT Sbjct: 60 YGFASQAEREAFDALIGVSGVGPQLALGILGGIEGDELWTAIATEDLGRLTAIAGVGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAV-AALVALGYKPQEASR 179 A+R+++E+ K L +P + E A+ AAL LG++P E Sbjct: 120 AKRVVLELAPTAKRL--------------APVTGVPMSQEVSALRAALGELGFRPGEIDA 165 Query: 180 MVSKIARPDASSETLIREALR 200 +V + D E +R AL+ Sbjct: 166 VVRRCP-GDLDFEAQVRWALK 185 >UniRef50_UPI000038462D COG0632: Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038462D Length = 173 Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 3/164 (1%) Query: 40 EAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFV 99 E G A +F VREDA L+GF + ER F+ L GVG K+ LAILS + Q + Sbjct: 2 EVGSAATLFIETQVREDAISLFGFLDTGERDWFRLLTTVQGVGAKVGLAILSVAAPDQLL 61 Query: 100 NAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA 159 + ++ L + G+G K A R++ E+KD+ + F P A V +S PA Sbjct: 62 QIIAAQDKAGLTRANGVGPKLAVRILTELKDKAGKIALGGFNPTAGAVASSAPLPAASGR 121 Query: 160 EQEAVAALVALGYKPQEASRMVSKIAR---PDASSETLIREALR 200 ++AV+ALV LGYK EA + V + AR DA S LIR +L+ Sbjct: 122 MEDAVSALVNLGYKRLEAFQAVGETARELGDDADSSALIRASLK 165 >UniRef50_C7RHH1 Holliday junction DNA helicase RuvA n=5 Tax=Anaerococcus RepID=C7RHH1_ANAPD Length = 195 Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 12/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 +IG +R I K+ + IE +GY + + + E E ++T VRED L Sbjct: 5 IIGHVRSI---KEDSFI-IENNNMGYLIFSSLKTLSNI-EINNEYKIYTSMQVREDDISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E +F L + +GPK+A+ ILS +S + A+ ++ L GIGKK+ Sbjct: 60 FGFFTKDELEMFTLLTSVSTIGPKIAMGILSSISVNEIKTAIINNDIDKLTVAKGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+ D+ K + F P ++ L S + D A + AL+ LGY+ + ++ Sbjct: 120 ASRIILELVDKVKKMD---FVPVENIELNSKDNEEIDVARE----ALLNLGYEKNDVEKV 172 Query: 181 VSKIARPDASSETLIREALR 200 + ++ D S E L++E+L+ Sbjct: 173 LFELKDTDLSLEGLVKESLK 192 >UniRef50_Q6A8K8 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Propionibacterium acnes RepID=RUVA_PROAC Length = 201 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 21/210 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI G + P V+++ GVG +V P Q+ + T VVRE++ L Sbjct: 1 MISHFSGTVSAAGPTWVVLDNHGVGIKVLCPPATAAS-ARINQDMSLHTSLVVREESLTL 59 Query: 61 YGFNNKQERTLFKELIKT-NGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF +R F EL++T +GVGPKLA AI+S + A Q A+ E+ L ++PGIG+K Sbjct: 60 YGFVEADDRDAF-ELVQTASGVGPKLAAAIMSVLDAAQLATAITEEDDATLCRVPGIGRK 118 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE--QEAVA-ALVALGYKPQE 176 A ++I+E+KD+ L P + AS AT A +E VA LV LG+ ++ Sbjct: 119 GAAKMILELKDKVAAL-----APRG-----ASASGATHVAAPWREQVAEGLVGLGWSTKD 168 Query: 177 ASRMVSKI-----ARPDASSETLIREALRA 201 A + V K+ A P S L+R ALR+ Sbjct: 169 AEKAVDKVVALKEADPAMSIGNLMRAALRS 198 >UniRef50_B1MCJ1 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Actinomycetales RepID=RUVA_MYCA9 Length = 202 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 18/208 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G +I+ V+IE GVGY V+ L G + + T +VRED+ L Sbjct: 1 MIASVNGEVIDIALDHVVIEAAGVGYRVNATPATLSTLRR-GTQIRLITAMIVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + R LF L+ +GVGPK+A+A L+ A A+ +V AL ++PGIGK+ Sbjct: 60 YGFTDTDARDLFTTLLGVSGVGPKIAMATLAVYDAPTLRQALADGDVAALTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHG---DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AERL++E++++ G +L A LV + V AL+ LG+ ++A Sbjct: 120 AERLVLELREKVAAAPGGTTELGRGTASLV------------RSQVVEALIGLGFAAKQA 167 Query: 178 SRMVSKIARPDASSET--LIREALRAAL 203 + + D +T + LR+AL Sbjct: 168 EQATDTVLAQDNPGDTGADVSGVLRSAL 195 >UniRef50_A1SJA6 Holliday junction ATP-dependent DNA helicase ruvA n=30 Tax=Actinomycetales RepID=RUVA_NOCSJ Length = 200 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG + ++EVGGVG ++ L GQ+A + T VVRED+ L Sbjct: 1 MIAFVRGQVAAVTLSSAVLEVGGVGLDIMCTPGTLATL-RVGQQAALPTSMVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ E+ F+ L +GVGPKLA A+L+ +S A+ ++V L ++PGIG+K Sbjct: 60 FGFADEDEKQTFELLQTASGVGPKLAQAMLAVLSTDDLRLAITGDDVKTLTRVPGIGQKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++DR G + + +PA D + LV LG+ ++A + Sbjct: 120 AQRIILELRDRIGAPTGAGRSAG----VPAPAGAVWRDQVHQ---GLVGLGWPVRDAEKA 172 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ +A P+A + LRAAL Sbjct: 173 VAAVA-PEAGDVPDVAALLRAAL 194 >UniRef50_UPI0001C31CBF Holliday junction DNA helicase RuvA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CBF Length = 198 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 23/183 (12%) Query: 26 YEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKL 85 Y + + ++P AG+ + +H +VR+DA LYGF ++ER LF L+ VGPK+ Sbjct: 31 YRLAVSSETLKQVPAAGKRVTLHSHLIVRDDALQLYGFATEEERDLFLMLLGVQSVGPKV 90 Query: 86 ALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRF------KGLHGDL 139 ALA+LSG + ++ + A+ + +PGIGK+TAER+IVE++++ +HG Sbjct: 91 ALAVLSGGTPRELLGALAAGDAARFQAVPGIGKRTAERIIVELREKAGVAVPDDAVHG-- 148 Query: 140 FTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREAL 199 S A+DD A LV LG+ EA R++ + P ++E LI AL Sbjct: 149 -------------SVASDDPRTLAREGLVGLGFSLDEAERLLKRA--PGETAEELIAHAL 193 Query: 200 RAA 202 R + Sbjct: 194 RTS 196 >UniRef50_P73554 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Chroococcales RepID=RUVA_SYNY3 Length = 211 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 21/195 (10%) Query: 16 LVLIEVGGVGYEVHMPMTCFYEL----PEAGQEAIVFTHFVVREDAQLLYGFNNKQERTL 71 +++ V GVGYE+ +P + + PE Q VFTH +VR+D L+GF ER L Sbjct: 21 FLILSVNGVGYELQVPHSLAQQWTPPPPEPQQ---VFTHLLVRQDQIALFGFGRLAERDL 77 Query: 72 FKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDR 131 F +L+ G+G +LA+A++ + + V AV V L + PG+GKK AERL +E+K + Sbjct: 78 FGQLMGVTGIGAQLAIALIETLGLEGLVQAVVTGNVKQLCQTPGVGKKGAERLALELKTK 137 Query: 132 FKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP---QEASRMVSKIARPD 188 H L + T P + +D E L+ALGY Q+A MVS++ PD Sbjct: 138 LSQWH-KLQMGTGETDSTLPTTALLEDLE----MTLLALGYTQTEIQQAIAMVSQV--PD 190 Query: 189 ASS----ETLIREAL 199 + E IR+A+ Sbjct: 191 VAQSEDPEVWIRQAI 205 >UniRef50_C3RKD6 Holliday junction DNA helicase subunit RuvA n=3 Tax=Bacteria RepID=C3RKD6_9MOLU Length = 188 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 16/199 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G ++E +++E G+GY +++ YE G+E +F + V+EDA LL Sbjct: 1 MYSYLIGTVVEMNIDHIVVENSGIGYLIYVNNP--YEYTR-GKEIKIFLYQQVKEDALLL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E+ +F +LI G+G K A+ IL+ ++A+E V L K+PGIG K Sbjct: 58 YGFKTSEEKEMFLKLILVKGIGCKTAIGILATGDVTSIISAIETGNVAYLKKIPGIGPKA 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I++++ +FK TP A ++ + +D + EA L+ALGYK E + Sbjct: 118 AQQIILDLQGKFKN------TPTATTLINN------NDLD-EAAEVLIALGYKKSEVDKA 164 Query: 181 VSKIARPDASSETLIREAL 199 ++ + + ++ AL Sbjct: 165 LAVLLNEKLDTNGYVKRAL 183 >UniRef50_C8NUB4 Holliday junction DNA helicase RuvA n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NUB4_9CORY Length = 207 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 4/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G +I +IE GVGY P L G+ V T VVRED L Sbjct: 1 MIDSLNGEVISIGLDHAVIECAGVGYRFLAPPPTLARLVR-GETTRVLTTLVVREDDMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + R++F L +G+GPKLA+A LS + + + + + +PG+GKK Sbjct: 60 YGFTDDDARSMFHRLTAVSGLGPKLAIAALSVFTPGELAAHITSGDAKTIQSIPGVGKKM 119 Query: 121 AERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGY--KPQEA 177 A+R+++E+KD+ +GL+ G + A + P + A ++ V ALV LG+ K A Sbjct: 120 ADRMVLELKDKLQGLYPGAAQSEAPEAAGEVPPISGSSFATEQVVEALVGLGFPEKSARA 179 Query: 178 SRMVSKIARPDASSETLIREALR 200 + A S L+R AL Sbjct: 180 AVDAVAAENDGAESSVLLRAALN 202 >UniRef50_Q5FQC5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gluconobacter oxydans RepID=RUVA_GLUOX Length = 200 Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 6/184 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G++ + + +++V GVGY V LP+ A V +VREDA L Sbjct: 1 MIGQLTGLVGQIEGERCIVDVNGVGYVVSASTRTLAVLPQPPSVARVLIETIVREDAIQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L VG K+ALAILS + + + A+ + G+L + G+G + Sbjct: 61 FGFATTDERDWFRLLTTVQSVGAKVALAILSANNPGELLLAINAGDKGSLTRAAGVGPRL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++ E++++ + G T +A +++ P+ E +A+ AL LG++ EA + Sbjct: 121 ADRILSELRNKVAKMPGGGGTVSAPGIVSGPS------VENDALLALAGLGFRRAEAWPV 174 Query: 181 VSKI 184 +SK+ Sbjct: 175 LSKV 178 >UniRef50_A7HL71 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=RUVA_FERNB Length = 188 Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 23/203 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI + +L+ + GV + + F E E G + +V+T +V ++ + Sbjct: 1 MIEIIEGIYKGRSEGKILVSINGVVFGIITDAESFSEFNE-GDKILVYTKLIVSQEDMTI 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++K ++ F++LIK + +GPK A+ ILS + NA+ +V L +PGIG+KT Sbjct: 60 YGFDSKVKKETFEKLIKVSKLGPKTAIKILSSTTVDFLSNAIATGDVEKLSSIPGIGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I E+KD ++ EA+ ALV+LGY +A Sbjct: 120 AERMITELKD-------------------EFEVVEVNEEMLEAIEALVSLGYSKTQARNA 160 Query: 181 VSKIAR--PDASS-ETLIREALR 200 VSK+ + P+ S+ +I+EAL+ Sbjct: 161 VSKVLKESPNISNVSKIIKEALK 183 >UniRef50_A0RP49 Holliday junction ATP-dependent DNA helicase ruvA n=24 Tax=Campylobacter RepID=RUVA_CAMFF Length = 184 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 23/202 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIE-VGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + GII +K+P V I+ + GV Y + + + L + G++ +F V+REDA L Sbjct: 1 MIKAIEGIITKKEPTNVWIKTLSGVSYGISISLFTSASL-QKGEKVELFITQVIREDANL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + E+ +F+ L+K NG+G A+A+ S + +F AV + L ++PGIG K Sbjct: 60 LYGFIKESEQRIFEMLLKVNGIGASTAMAVCSSLGPDEFSIAVMNGDDAVLRRVPGIGPK 119 Query: 120 TAERLIVEMKD-RFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 TA LI ++ D +F ++ + + EA AL +LG+K S Sbjct: 120 TARTLIAQLSDAKFGEIN------------------SMPSYQNEAFMALESLGFKRDRIS 161 Query: 179 RMVSKIARPDASSETLIREALR 200 +++++ + D +S LI+EAL+ Sbjct: 162 KVLNECSSNDTAS--LIKEALK 181 >UniRef50_C3WBK1 Holliday junction DNA helicase ruvA n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBK1_FUSMR Length = 196 Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L+G + K+P + ++V GVGY+V++ + Y+ + G+ ++ ++EDA L Sbjct: 1 MFEYLKGKVEYKKPDYLALDVNGVGYKVNISLRV-YDKIKTGESVRLYIFNYIKEDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++ER LF+ L+ GVG L L+I+S +Q V + L ++P +G+K Sbjct: 60 IGFLEERERNLFEMLLGVKGVGVSLTLSIMSTFDVEQLRKIVAENDYATLKRVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K + K + G+LFT +L S A +D E AL ALGY +E + + Sbjct: 120 AQQVILDLKGKLKAI-GNLFTQDENLF----ESFAIED---ELYEALEALGYSQKEINSL 171 Query: 181 VSKIARPDASSETLIREALRAAL 203 VSK + T I EA++ L Sbjct: 172 VSK---EEIRGFTSIEEAIKCVL 191 >UniRef50_C6JI67 Holliday junction DNA helicase ruvA n=5 Tax=Fusobacterium RepID=C6JI67_FUSVA Length = 198 Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 22/209 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M LRG + K+P + ++V GVGY+V++ + Y+ AG+E ++ + ++EDA L Sbjct: 1 MYEYLRGKVEYKKPDYLALDVNGVGYKVNISLRT-YDFINAGEEVKLYIYNYIKEDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++ER LF+ L+ G+G LAL+++S + V ++ L ++P +G+K Sbjct: 60 IGFLEERERNLFEMLLGVKGIGVSLALSVMSTFDIDTIRDLVATDDYNNLKRVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA------EQEAVAALVALGYKP 174 +++LI+++K + K L DDA E+E ++AL LGY Sbjct: 120 SQQLILDLKSKLKTLDA------------LSIDTRNDDAARHLMIEEELISALEGLGYSK 167 Query: 175 QEASRMVSKIARPDASSETLIREALRAAL 203 +E + + I R + S I EA++ L Sbjct: 168 KEINTL---ITREELKSFKTIEEAIKGVL 193 >UniRef50_A1UR85 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Rhizobiales RepID=RUVA_BARBK Length = 217 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 10/210 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L GI+ ++++V GVGY V + LPE GQ +F VREDA L Sbjct: 1 MIGKLTGILDSVFEDHIILDVQGVGYVVFLSNRLLSSLPERGQAVSLFIETHVREDAIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E+ F L GVG K+ALAILS + Q A+ ++ + + PG+GK Sbjct: 61 FGFETKVEQDWFCLLQNVRGVGAKVALAILSTLPPPQLAQAITLSDIAMISRSPGVGKMV 120 Query: 121 AERLIVEMKDR---FKGLHGDLFTPAADLVLTSPASPATDDAEQ---EAVAALVALGYKP 174 +ER+I E+K++ H + + TS + Q +A+AAL LG++ Sbjct: 121 SERIINELKNKALPSNAPHQSMPHFVSYSSETSSQAGTQHTGHQHSMDALAALTKLGFER 180 Query: 175 QEASRMVSKIARP----DASSETLIREALR 200 +A+ + + + SS LIR +L+ Sbjct: 181 DQATHALQEAIKAFEGETPSSALLIRHSLK 210 >UniRef50_Q3ABX9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RUVA_CARHZ Length = 195 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 11/201 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G +++K V+++V G+G++V + L E +++T VRED L Sbjct: 1 MIAVLKGKVLDKTLDSVVVDVNGIGFKVAVLPRELGSL-NLNSEVVMYTSLQVREDGWFL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++ R F L+ +G+GPK ALAIL+ + ++ + ++ AL K+PG+GKK Sbjct: 60 YGFSDEETRKFFDLLLSVSGIGPKAALAILNEFTPEKLNWVIANKDEKALTKVPGVGKKN 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL +E+KD+ FT + V D + L++LG EA + Sbjct: 120 AQRLFLELKDKIGYTS---FTSNEESV------ENFQDLWGDVYKGLLSLGLSAAEAREI 170 Query: 181 VSKIARPDASS-ETLIREALR 200 + KI + + E I ALR Sbjct: 171 LGKIDKKSVKTPEEGIALALR 191 >UniRef50_Q1J0F6 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Deinococci RepID=RUVA_DEIGD Length = 198 Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + E + +I GGVGYEV P + L GQ A + VVREDAQLL Sbjct: 1 MIAYLSGAVREVREASAVIVAGGVGYEVFCPASTLGRLVP-GQPAELNIRHVVREDAQLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + LF LI +GVGPKLAL++LS + + +V L + G+GKKT Sbjct: 60 FGFLDTDSLRLFDLLIGVSGVGPKLALSLLSALPVTAVAQGLLSGDVKLLSSVSGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTP---AADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AERL++E++++ P AA +++ + T A ++A+ AL+ALG++ + Sbjct: 120 AERLVLELQNK---------VPEHLAAGAPVSAGKAALTSTAGRDAIEALLALGFREPQV 170 Query: 178 SRMVSKI--ARPDASSETLIREAL 199 +V+++ A P+ S++ LIR+ L Sbjct: 171 RSVVAELLAADPEQSADALIRKGL 194 >UniRef50_C0VVS8 Holliday junction DNA helicase motor protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVS8_9CORY Length = 200 Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 98/202 (48%), Gaps = 10/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++ K +IE GGVGYE ELP G++ V T V+ E L Sbjct: 1 MIASLHGEVVAKSLTGGVIECGGVGYEFLATAATLAELP-LGEDGRVLTTMVIGEKVVTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ERT+F +L G+GPKLALA L+ S + AV ++ L +PG+G + Sbjct: 60 YGFAHDSERTMFSQLQGVQGLGPKLALACLNTYSPSEIAVAVANDDKKTLQAIPGVGARM 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++ + + D F + +S A P T +E VAALV LG+ A+ Sbjct: 120 AAKMTAVLDGKL-----DEFIDST-ATTSSAAEPVTGGSET-VVAALVQLGFDEDSANHA 172 Query: 181 VSKI--ARPDASSETLIREALR 200 + + P + T +R AL+ Sbjct: 173 AAWAEESNPGGDTGTNLRHALQ 194 >UniRef50_Q2RHT6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RUVA_MOOTA Length = 202 Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 2/130 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + P +L+E GG+G+ V + P G E V+T VVREDA L Sbjct: 1 MIGYLRGRLHLVTPEGILLETGGIGWLVRTVTNRSW--PAPGTEIAVYTQLVVREDAMEL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E LF L NG+GP+ AL IL +Q A+ + L LPGIG K Sbjct: 59 YGFTRPEELHLFTLLRGVNGIGPRGALQILGAAKPEQLSRAIAAGDSAFLTALPGIGAKK 118 Query: 121 AERLIVEMKD 130 A+RL++E+KD Sbjct: 119 AQRLLLELKD 128 >UniRef50_Q8REJ7 Holliday junction ATP-dependent DNA helicase ruvA n=10 Tax=Fusobacterium RepID=RUVA_FUSNN Length = 194 Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 16/203 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G + K+ + I++ GVGY V+ P+ YE E G + ++ + ++ED L Sbjct: 1 MFEYLYGTVEYKKMDYIAIDINGVGYRVYFPLRE-YEKIEVGNKYKLYIYNHIKEDTYKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++++R +F+ L+K NG+G LALA+LS S + + + + + L ++P +G+K Sbjct: 60 IGFLDERDRKIFELLLKINGIGSSLALAVLSNFSYNKIIEIISKNDYTTLRQVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+ +I+++K + K +L T + + D E + V AL LGY +E + Sbjct: 120 AQIIILDLKGKLK-----------NLTYTEEETVSMDMLE-DLVLALEGLGYNKKEIDKT 167 Query: 181 VSKIARPDASSETLIREALRAAL 203 + KI SS + +A++ L Sbjct: 168 LEKIDLNKFSS---LEDAIKGIL 187 >UniRef50_B8DNJ8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfovibrio RepID=RUVA_DESVM Length = 202 Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 10/191 (5%) Query: 1 MIGRLRGIIIE-KQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G + E V++ GGVGYEVH+P LPE G + VREDA Sbjct: 1 MIAYVEGRVAEISGNACVVVTEGGVGYEVHLPAHTLSRLPERGGQVAFHVRTEVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF+ ER F L + VG + ALAILS V ++V AL ++ GIGKK Sbjct: 61 LFGFSTWDERQTFMVLTTISKVGARTALAILSQFRPDDLRRLVVEDDVLALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K + A LVL A+P ++A+A L LGY EA+ Sbjct: 121 TAQHIFLELKYKLK-----VEDLPAGLVLAGGAAPG--GVFRDALAGLGNLGYLEDEAAP 173 Query: 180 MVSKI--ARPD 188 ++ ++ A PD Sbjct: 174 VLKEVLKAEPD 184 >UniRef50_A9B9X1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=RUVA_PROM4 Length = 223 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 10/199 (5%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G I+ ++ GVGYE+ + L +I + H V++ED Sbjct: 1 MIGWLKGEKIDHWNNGNRAGFVLSCNGVGYEIQLSRRNLIALNNYNVLSI-WIHQVLKED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF K ER LF++LI +GVGP+LA+++L S +Q + V+ +EV L + G+ Sbjct: 60 GSNLFGFIEKSERDLFRKLITVSGVGPQLAMSLLDDNSYEQLIANVQNKEVTKLTRSSGV 119 Query: 117 GKKTAERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP- 174 GK+TAERLI+E++++ + F+P L S A ++ E +AL L Y Sbjct: 120 GKRTAERLILELQNKLSDFDLNNEFSPPTKLRPES-AEDLNEELLTEIKSALRNLDYSDF 178 Query: 175 --QEASRMVSKIARPDASS 191 EA V+ DA+S Sbjct: 179 EILEAVNTVTSNYLDDAAS 197 >UniRef50_UPI000196B988 hypothetical protein CATMIT_00479 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B988 Length = 204 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++GII ++I+ G+GYEVH+ ++ G +A V+ + V+ED L Sbjct: 19 MYSYIKGIIAGLYSDHIVIDNHGIGYEVHVSNPYNFK---KGDDATVYIYQQVKEDDLTL 75 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E+ LF++LI G+G K A+ IL+ ++A+E + + L K+PGIG K Sbjct: 76 FGFKKKEEKELFQKLILVKGIGCKTAIGILATGEIDAIIDAIEGKNIAYLKKIPGIGPKA 135 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I++ LHG F A L SP +EA L+ALGYK + + Sbjct: 136 AQQIILD-------LHGK-FDKRAMKPLGSPDY-------EEATEVLIALGYKQSDVEKA 180 Query: 181 VSKIARPDASSETLIREAL 199 + ++ + + ++ AL Sbjct: 181 MKVLSSENLDTNGYVKRAL 199 >UniRef50_C1DXL3 Holliday junction DNA helicase RuvA n=3 Tax=Sulfurihydrogenibium RepID=C1DXL3_SULAA Length = 181 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 107/199 (53%), Gaps = 25/199 (12%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I++ +++E G G ++++P + + E V+T V+E+ + Sbjct: 1 MLEFIKGKIVKVDKNKIIVEKDGFGIKINVP-----DSEKFSDEDTVYTILKVKEEEIRV 55 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++E+ LF +L + +GVG K ALAIL S +F++ +++ +V +L K+ GIGKKT Sbjct: 56 IGFKTQEEKELFNKLTQIHGVGEKHALAILGHFSIDEFIDILDQSDVDSLTKVQGIGKKT 115 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IVE+K + L Q+ V L LG+ +++ ++ Sbjct: 116 AQRIIVELKGKVDFSENSLI--------------------QDFVKTLTNLGFDKEQSYKV 155 Query: 181 VSKIARPDASSETLIREAL 199 V K+ + D + E ++++A+ Sbjct: 156 VRKLLKEDNNVENILKKAI 174 >UniRef50_UPI000038343B COG0632: Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038343B Length = 182 Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 73/131 (55%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L+G++ V+++V GVGY VH LP+ G+ + VRED L Sbjct: 1 MIGKLKGLVDSYGEDFVILDVNGVGYVVHCSARTLQRLPKPGEATDLAIETHVREDMIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F+ L GVG ++AL +LS + + A+ + GA+ + PG+G + Sbjct: 61 YGFRSDAEREWFRLLQTVQGVGTRVALGVLSVLEPEALATAIATGDKGAIARAPGVGPRL 120 Query: 121 AERLIVEMKDR 131 A RL+ E+KD+ Sbjct: 121 AARLVAELKDK 131 >UniRef50_Q8U9K5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Rhizobiales RepID=RUVA_AGRT5 Length = 205 Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 4/177 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L+G I E VL++V GV Y + ++ G+ ++F VRED L Sbjct: 1 MIGKLKGSIEEIGADYVLVDVHGVCYVAYCSARTLSKIGSVGEAVVLFIETYVREDQLKL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F L GVG K+ALA+LS +S + NA+ ++ + + PGIG K Sbjct: 61 FGFVSALEREWFNLLQSVQGVGSKVALAVLSTLSPSELANAIALQDKTMISRAPGIGPKV 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE-QEAVAALVALGYKPQE 176 A RL+ E++++ GD +A + L A +AV+AL LGY + Sbjct: 121 AVRLVTELRNKAPAFAGD---ASASIGLKQELGEGVASAPVADAVSALTNLGYSRDQ 174 >UniRef50_D2MP66 Holliday junction DNA helicase RuvA n=1 Tax=Bulleidia extructa W1219 RepID=D2MP66_9FIRM Length = 192 Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G+I E ++I G+G+ V+ P + E+ G+E VFTH V E+ L Sbjct: 1 MIAFIQGVITEIGDDYIVINHQGLGWLVYYPHSL--EV-HVGEELQVFTHMSVSENDMRL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ +E+TLF LI G+GPK A+ +L A+ + +V AL KLPGIG K+ Sbjct: 58 YGFSSSKEKTLFLNLISVKGLGPKTAMTMLQKSGYALITEAISKGDVAALKKLPGIGAKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +++++++ + + ++ ++ P QEA+ AL GYK + + + Sbjct: 118 ASQIVLDLQGKLVAVE-----VSSTKMMNYPLEI------QEALEALKNFGYKGGDLNVV 166 Query: 181 VSK-IARPDASSETLIREALR 200 +K + +P +E IR L+ Sbjct: 167 GNKMLEQPSMKTEEYIRFGLK 187 >UniRef50_C7TAK4 Holliday junction DNA helicase RuvA n=9 Tax=Lactobacillus RepID=C7TAK4_LACRG Length = 198 Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 111/201 (55%), Gaps = 10/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G I P ++I+V G+G+ + + Y+ EAG++ ++ ++RE+ Q L Sbjct: 1 MYEYFEGTIQAVTPAYIVIDVNGIGFRLLVANP--YDF-EAGKQTRIYVQLIIRENDQTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ F +L+ G+GPK ALAIL+ +S+ A+ +++V L K PGIGKKT Sbjct: 58 YGFETAADKRTFNQLLSVTGIGPKSALAILANVSSGGLATAIAQDDVKFLTKFPGIGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+++K + + D PAA ++ P + +A+AALVALGY + + Sbjct: 118 AAQIILDLKGK---ITTDA-QPAAATIM--PTADQVAPELADALAALVALGYTQRAVDGI 171 Query: 181 VSKIARPDA-SSETLIREALR 200 + DA +++ +RE LR Sbjct: 172 TDALKAFDATTTDAYLREGLR 192 >UniRef50_A8SLR3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLR3_9FIRM Length = 200 Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 18/192 (9%) Query: 17 VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELI 76 ++I+ GG+GY++ + + G ++T ++V+ED L+GF E ++FK L+ Sbjct: 17 IVIDNGGIGYKIFTSNNTLFNVT-VGDYYTIYTDYIVKEDYVALFGFKTMDELSMFKLLV 75 Query: 77 KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRF---- 132 N +GPK+A ILS MS + + AL G+GKKTA+++I+E+KD+ Sbjct: 76 SVNSIGPKVACGILSSMSVDSLKLTIVNGDAVALATAKGVGKKTAQKIILELKDKISIDS 135 Query: 133 ---KGLHGDLFTPAADLVLTSPASPATDDAEQEAVA-ALVALGYKPQEASRMVSKIARPD 188 K + G + S D ++E V+ AL+ LG+ + R +S I + Sbjct: 136 ISSKDISG---------MEASTLDSGKDLEKRELVSDALINLGFMKNDIERFLSSINIDE 186 Query: 189 ASSETLIREALR 200 E +I+ +++ Sbjct: 187 MEIEDIIKLSMK 198 >UniRef50_A8LHP9 Holliday junction ATP-dependent DNA helicase ruvA n=32 Tax=Alphaproteobacteria RepID=RUVA_DINSH Length = 224 Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 106/218 (48%), Gaps = 18/218 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G+++ + ++++V GVGY V +P G +FT +VRED L Sbjct: 1 MIGRLSGVLVYRGRDHIVLDVRGVGYVVQCSERTLAGMPAPGGPVALFTELLVREDLLQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E+ + L GVG K +++ILS + A+ + GAL K G+G K Sbjct: 61 YGFPTLLEKEWHRLLTSVQGVGAKASMSILSTLGVDGVGRAIALGDWGALRKAQGVGPKI 120 Query: 121 AERLIVEMKDRFKGL--HGDLFTPAADLVL---------------TSPASPATDDAEQEA 163 A+R++ E+KD+ + G A D V+ PA P+ + A Sbjct: 121 AQRVVNELKDKGPEVMAMGGTLEAALDGVIEDGMAASEGIEPPSAARPAVPSAASDQAGA 180 Query: 164 VAALVALGYKPQEASRMVSKIARPDASSET-LIREALR 200 ++ALV LGY EA+ V+ A A ET +IR ALR Sbjct: 181 LSALVNLGYGQGEAASAVATAAGEGAVGETDIIRAALR 218 >UniRef50_C9M7E3 Holliday junction DNA helicase RuvA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7E3_9BACT Length = 200 Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ LRG +I + ++E GG+G++V + F L G+ + T+ V + L Sbjct: 1 MLASLRGTVILLEGSSAVVECGGLGFQVQLTRKAF-GLCRVGESVFLQTYLQVSDAGMSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L GVG KLA+ +L +SAQ+ + AV + L +PGIGKKT Sbjct: 60 FGFADAAERQAFELLTTVKGVGGKLAMTVLQSLSAQETIAAVAAGDSKTLTAVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E+ ++ + G +ADL A E + AL +LG+ + R Sbjct: 120 AERICFELSEK---ITGSSEWSSADLT-------AKLQHSDEVIEALESLGFDHASSVRA 169 Query: 181 VSKIARPD---ASSETLIREALR 200 ++ + AS+E I LR Sbjct: 170 YQQLCQERGEPASTEEAIFNCLR 192 >UniRef50_Q03B18 Holliday junction ATP-dependent DNA helicase ruvA n=26 Tax=Lactobacillales RepID=RUVA_LACC3 Length = 198 Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 78/131 (59%), Gaps = 3/131 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GII P ++I+V G+G+ + + +E AG++ V+ ++R++ Q L Sbjct: 1 MYEYFEGIIQAVTPAYIVIDVHGIGFRLLVANPYHFE---AGEQKRVYVQLIIRDNDQTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ F +L+ G+GPK ALAIL+ +S+ A+ +++V L K PGIGKKT Sbjct: 58 YGFEGAADKRTFNQLLTVTGIGPKSALAILANVSSGGLATAIAQDDVKFLTKFPGIGKKT 117 Query: 121 AERLIVEMKDR 131 A ++I+++K + Sbjct: 118 AAQIILDLKGK 128 >UniRef50_Q7U7F0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Synechococcus sp. WH 8102 RepID=RUVA_SYNPX Length = 205 Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 15/180 (8%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G + + LVLI GGVGY+V + + ++ Q + H VV D Sbjct: 1 MIGWLKGDVQHRDQKGSRNLVLIACGGVGYDVQL-IERDWQAVSTDQRHEFWIHQVVSAD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF ER LF+ELI+ +GVGP+ LA+L+ + ++ V A+ ++ L + G+ Sbjct: 60 NLQLFGFLQLAERDLFRELIQVSGVGPQAGLALLNACAYKELVTALVHSDLKTLCRAKGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL +E++ R + T P D + +A L LG++ E Sbjct: 120 GKRTAERLALELRTRLTD----------SVASTGPERNQLDPVAPDLIATLETLGFETHE 169 >UniRef50_C7MCB9 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCB9_BRAFD Length = 205 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 15/207 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + +++EVGG+GY V G E + T VVRED+ L Sbjct: 1 MIASLTGRVARIDLDSLVLEVGGIGYLVRTTPQALSAT-RHGAELTLHTELVVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E F+ + +G+GP+ ALA+L+ + ++ AV ++ + + PGIG K Sbjct: 60 FGFPQLEEAETFRIVQSVSGIGPRTALAVLAVLEPEELRRAVAEQDAKTITRTPGIGPKV 119 Query: 121 AERLIVEMKDRF---KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 A R+++E+ + L TPAA+ +PA+P+ DA + V ALV LG+ + A Sbjct: 120 AGRMLLELGGKLPAPASLSAVPGTPAAE----APATPSGADA--DVVEALVGLGWAEKAA 173 Query: 178 SRMVSKIARPDASSE----TLIREALR 200 + V AR D +E L+R ALR Sbjct: 174 LKAVES-ARADDGAELDSAELLRRALR 199 >UniRef50_D1Y1N8 Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1N8_9BACT Length = 203 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 93/180 (51%), Gaps = 8/180 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ +RG ++E+ ++E G G EV + E E G + ++T V + +L Sbjct: 1 MLASIRGKVVERSEFTAVVECNGFGVEVLLTRRA-AERCELGTQVFLYTLLQVGDAGIVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER FK +I T GVG K A++IL +S + V AVE+ ++ L +PGIGKKT Sbjct: 60 YGFADDTERRTFKLMILTKGVGGKAAISILQYLSPAEIVAAVEQNDIRLLTSVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATD-DAEQEAVAALVALGYKPQEASR 179 AER+ E+ DR +H F L +PA D A + AL +LG+ A R Sbjct: 120 AERICFELSDR---IHKKGFI---QLTGEFHGAPAGDRQAAASVLDALESLGFDRASAVR 173 >UniRef50_A6GER9 Holliday junction DNA helicase motor protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GER9_9DELT Length = 206 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 73/116 (62%) Query: 16 LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKEL 75 +V+++V GVGYE+ + + +P G E ++ H VREDA L+GF +ER LF+ L Sbjct: 10 VVILDVKGVGYELFVSIQTLAGVPAEGDEVELWVHTNVREDAITLFGFAEAEERLLFRML 69 Query: 76 IKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDR 131 VGP+ A+A+L G A + + + ++ LVK+PGIGKKT+E++++ + D+ Sbjct: 70 TSVPKVGPRNAVAVLGGFPAIELLETIAAKDSAKLVKIPGIGKKTSEQIVLTLGDK 125 >UniRef50_C1XYW5 Holliday junction DNA helicase subunit RuvA n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYW5_9DEIN Length = 193 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 16/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ L+G + K V++ VGG G EV P T LPE G+ A+ T VVRED L Sbjct: 1 MVRYLKGTALRKTENSVILLVGGFGLEVFCPTTTLTHLPEEGEIAL-HTKLVVREDDLSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF+ L+ +GVGPK+ L +LS +S A+ ++ L G+G+K Sbjct: 60 YGFADQRSLELFEMLLGVSGVGPKVGLNLLSSLSPALLARALADGDIRLLTGAQGVGRKL 119 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AER+ +E++ + L G+ A +L P + +EA ALV LG++ + Sbjct: 120 AERIALELRGKVPPHLMGE-----AGPILRRPQT-------EEAELALVTLGFRENQVRS 167 Query: 180 MVSKIAR--PDASSETLIREALRA 201 V++I + P+AS++ +IR AL+A Sbjct: 168 AVAQIVQQNPEASTQEIIRLALKA 191 >UniRef50_UPI000050F77A Holliday junction DNA helicase, RuvA subunit n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F77A Length = 206 Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 14/181 (7%) Query: 23 GVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVG 82 GVG V++ G + + T VVRED+ L+GF + E F+ L+ +G+G Sbjct: 31 GVGRRVNVTPDTLSN-TRHGADIELVTTLVVREDSMTLFGFGTEDENHTFEVLLSISGIG 89 Query: 83 PKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTP 142 P+LA+AILS M + A+ ++ AL ++PGIGKK A R+I+E++++ L P Sbjct: 90 PRLAMAILSVMGPGELAAAISNQDANALTRVPGIGKKGASRIILELENKLPKLSAS--EP 147 Query: 143 AADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARP---DASSETLIREAL 199 L A Q+ V ALV LG+K +A+ +V ++ +A + L++ +L Sbjct: 148 GPQLSFGG--------ANQQVVDALVGLGWKEAQAADVVQEVVNDLGQNAGTSALLKASL 199 Query: 200 R 200 + Sbjct: 200 K 200 >UniRef50_C3J9S7 Holliday junction DNA helicase RuvA n=2 Tax=Bacteria RepID=C3J9S7_9PORP Length = 204 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 13/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G I P L++VGGVGY++++ +T + L + A ++ ++REDA LL Sbjct: 6 MIAYIEGKIDRLSPTNALLDVGGVGYDINITLTDYTAL-QGKPSARLWITEIIREDAHLL 64 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ R F++L +GVGP A ILS + + + V L + GIG KT Sbjct: 65 YGFVREESRAFFEKLCSVSGVGPSTARLILSSYTPNDLASIIGNGAVDLLKNVKGIGLKT 124 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSP---ASPATDDAEQEAVAALVALGYKPQEA 177 A+R++V++K G + A DL P +P EA AL LG+ Sbjct: 125 AQRIVVDLK-------GKIDLSAYDLSEGMPEGGNAPEVAAVSDEAQRALKMLGFPEAAI 177 Query: 178 SRMVSKIARPDAS--SETLIREALR 200 + V + DA E +I++AL+ Sbjct: 178 RKAVKAVLGADAHLPVEEVIKQALK 202 >UniRef50_Q7V7T9 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Cyanobacteria RepID=RUVA_PROMM Length = 225 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 8/191 (4%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G +E V++ GVGYEV + E+ I++ H V R+D Sbjct: 1 MIGWLQGQKVEAWQQGTRQGVVLACAGVGYEVQIAPRHLSEMEHGQNTFILWIHQVQRDD 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF ++ER +F+ LI +GVGP++ALA+L + V A+ + ++ L + G+ Sbjct: 61 GSSLFGFPERRERDMFRTLIGVSGVGPQMALALLEECQTGELVEAIVQGDLRKLCQAQGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTS--PASPATDDAEQEAVAALVALGYKP 174 GK+TAERL VE++ + P LV + D + E L LGY+ Sbjct: 121 GKRTAERLAVELRTKLAEF--SCRDPGMSLVDNGVIDSHQLKDSSLHELQITLGGLGYED 178 Query: 175 QEASRMVSKIA 185 E R + +A Sbjct: 179 LEIRRAIRAVA 189 >UniRef50_Q0ALX8 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Alphaproteobacteria RepID=RUVA_MARMM Length = 213 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 19/215 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + ++++V GVGY V L E Q+ ++ VREDA L Sbjct: 1 MIGMLTGRVAALGADELVLDVSGVGYLVGAGARTLSRL-EPDQDIVLHIETHVREDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +R F L GVG K A AIL + + NA + + G+G K Sbjct: 60 YGFLDDIDRAWFVHLQNIQGVGAKAAFAILDTVPVSEIANAAALGDKSTFARAKGVGPKL 119 Query: 121 AERLIVEMKDRFK--------GL--HGDLFTPAADLVLTSPASPATDD--AEQEAVAALV 168 A R+ E+KD+ GL H D T +P +PA D A ++AV+ALV Sbjct: 120 ATRIATELKDKAPPTGRSFSIGLPVHSDDGTTGG-----APVAPAGGDSLAREDAVSALV 174 Query: 169 ALGYKPQEASRMVSKIARPDASSETLIREALRAAL 203 LGY +A + V+KI R DA SE + + +R +L Sbjct: 175 NLGYNESQARQAVAKILR-DADSEAPLGDVIRLSL 208 >UniRef50_A2BQZ1 Holliday junction ATP-dependent DNA helicase ruvA n=7 Tax=Prochlorococcus marinus RepID=RUVA_PROMS Length = 225 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 82/141 (58%), Gaps = 7/141 (4%) Query: 1 MIGRLRGIIIE----KQPPLVLIEVGGVGYEVHMPMTCFYELPE---AGQEAIVFTHFVV 53 MI + G +++ Q VLI G+GYE+ + + F +L + + ++ + Sbjct: 1 MISWINGDLVDLWQTNQKSFVLINCQGLGYEIQILESFFLKLKTNQISTKNITLWIKHIK 60 Query: 54 REDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKL 113 +ED+ LL+GF +K ++ F E++ GVG ++ + IL+ S + +NA++ ++ + + Sbjct: 61 KEDSDLLFGFTSKDQKNFFIEILSIRGVGSQIGIGILNKFSISEVINAIKTQDKKLICSV 120 Query: 114 PGIGKKTAERLIVEMKDRFKG 134 PGIG+K +ERLI+E+K +FK Sbjct: 121 PGIGQKMSERLILELKSKFKS 141 >UniRef50_Q729U3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Desulfovibrionaceae RepID=RUVA_DESVH Length = 202 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 9/174 (5%) Query: 17 VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELI 76 V++ GGVGYEV +P LP+ G F VREDA LYGF ER F L Sbjct: 18 VVVTDGGVGYEVFVPGHTLARLPDKGGRVSFFISTEVREDALELYGFATWDERQTFIVLT 77 Query: 77 KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLH 136 + VG K LAILS V ++V AL ++ GIGKKTA+ + +E+K + K Sbjct: 78 SISKVGAKTGLAILSQFRPDDLRRLVVEDDVLALTRVSGIGKKTAQHIFLELKYKLK--V 135 Query: 137 GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKI--ARPD 188 DL PAA ++T A ++A+A L LGY +EAS ++ + PD Sbjct: 136 EDL--PAAAPLVTGGAPGGV---FRDALAGLANLGYGEEEASHVLKDVLHGEPD 184 >UniRef50_A9BIJ5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Petrotoga mobilis SJ95 RepID=RUVA_PETMO Length = 190 Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 12/199 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++ I + + VLI++G + E + P + G + F + E L Sbjct: 1 MIRKINATIEDFEDEKVLIKIGVLTLEAY-PSLNVIRYFKKGDQYEFFASLEISEWNTSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F +K ER +F+ L K + +GP++A IL A++F+ + ++ L LPGIGKKT Sbjct: 60 YIFKDKIERDVFESLKKVSKIGPRIASKILRKTDAEEFIQMINSQDTALLSSLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLI E+ + F ++ AD ++ +EA+ AL LG++ E ++ Sbjct: 120 AERLISELSNSFSA-----YSTGAD------TQSYGNNNLKEAIEALETLGFQRYEIMKV 168 Query: 181 VSKIARPDASSETLIREAL 199 + ++ D +E +I+E L Sbjct: 169 IGQLDLEDLKTEEIIKECL 187 >UniRef50_A3VP65 Holliday junction DNA helicase RuvA n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VP65_9PROT Length = 202 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 100/203 (49%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + +I+V GVGYEV L + GQE + T +V E L Sbjct: 1 MIAALHGTVSVLSGENAIIDVNGVGYEVAATPRLLSSLAQ-GQEVRLITETLVAETYIRL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 F +ER F+ L GVG K ALAILS ++ +AVE + + + G+G K Sbjct: 60 VAFQTIEERLTFRLLQTVQGVGAKAALAILSALTPADLFDAVEAGDKAMVARAQGVGPKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++ E+K + G+ G F A TS A A D ++AVAALVALG+ A R Sbjct: 120 ALRIVTELKGKCGGIVGA-FPAVASPRATSAA--AVDSPAEDAVAALVALGFDHGAARRT 176 Query: 181 VSKIARPD---ASSETLIREALR 200 +S + PD + +E LI L+ Sbjct: 177 ISTL--PDLETSRTEDLITAGLK 197 >UniRef50_Q83GK0 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Tropheryma whipplei RepID=RUVA_TROWT Length = 194 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G++ +P V++ + G+G+ V +P + PE E ++T VRED+ L Sbjct: 1 MIASLSGLLEAVRPGSVVVNMHGIGFLVRVPQSFN---PEVDAEVKLYTSLQVREDSVSL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E T+F++LI +GVGP++ALAILS ++ + AV + L ++ G+GKK Sbjct: 58 YGFASVLECTVFEQLITISGVGPRVALAILSVLTPAEVAAAVLEGDDKPLQRVSGVGKKL 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +++++ + + L + D E V AL+ LG++ QE++ Sbjct: 118 AGTIVLQLAGKLTSVP-----------LENRKQEQAVDRSAEIVQALIGLGWQRQESAAA 166 Query: 181 VSKIARPDASSET--LIREALR 200 V + D S ++R ALR Sbjct: 167 VESVLEKDQSLTMPEILRNALR 188 >UniRef50_B8J094 Holliday junction DNA helicase RuvA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J094_DESDA Length = 204 Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 7/185 (3%) Query: 1 MIGRLRGIIIEKQ-PPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI L G + E +LI GVGY V +P LP G+ ++T VREDA Sbjct: 1 MIAYLEGRLAETWGNTCLLITENGVGYAVALPAHTLSVLPGRGEHLALYTSLAVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF +ER F+ LI + VG + AL+ILS + V E+V AL ++ GIGKK Sbjct: 61 LFGFATFEERQTFEVLISISKVGARTALSILSIYRPEDLRRIVFEEDVMALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K D+ P A ++ ++ P + ++ + L LGY E + Sbjct: 121 TAQHVFLELKYKLK--VDDV--PQAAVLASTGERPGS--VFRDVLDGLANLGYAEDECAP 174 Query: 180 MVSKI 184 MV K+ Sbjct: 175 MVKKL 179 >UniRef50_B0PAT7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAT7_9FIRM Length = 172 Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/101 (46%), Positives = 60/101 (59%) Query: 32 MTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILS 91 +T LP G EA ++TH VREDA LYGF + E FK LI +GVGPK ALAILS Sbjct: 4 LTTLSCLPPVGGEATLYTHLNVREDALDLYGFYTQAELNAFKMLIGVSGVGPKSALAILS 63 Query: 92 GMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRF 132 M+ + + + +L PGIG K A+R+I+E KDR Sbjct: 64 DMTPDKLALCIAAGDSKSLRAAPGIGPKAAQRIILECKDRI 104 >UniRef50_Q1GE12 Holliday junction DNA helicase RuvA n=12 Tax=Rhodobacterales RepID=Q1GE12_SILST Length = 229 Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/131 (35%), Positives = 75/131 (57%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G + K P V+I+V GVGY V+ LP G+ ++T +VRED L Sbjct: 1 MIGKLTGRLDYKTPDHVMIDVRGVGYIVYCSDRTLASLPAVGEAVQLYTELLVREDLMQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ + L GVG K++LAILS + + A+ + A+ G+G KT Sbjct: 61 FGFTSLVEKEWHRLLTSVQGVGAKVSLAILSALGPEGVSRAIALGDWAAVKAAKGVGPKT 120 Query: 121 AERLIVEMKDR 131 A+R+++++KD+ Sbjct: 121 AQRIVLDLKDK 131 >UniRef50_C3XDN4 Holliday junction DNA helicase motor protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDN4_9HELI Length = 189 Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 18/179 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL+G I + P V +EV GV Y V + + L + ++RED+ LL Sbjct: 1 MIVRLKGNIEKLLPTGVELEVSGVTYMVEISLLTSAALQNKTHVTLEIAE-IIREDSHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ER +F +L+K NGVG K+AL ILS S +QF+ V+ + AL + GIG K Sbjct: 60 YGFETRREREVFLQLLKVNGVGAKIALMILSSYSVEQFLAIVQTNNLAALKGVKGIGTKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A ++++E+ G + TP + Q A ALVALG+K + ++ Sbjct: 120 AGKIMLEL----AGYTQSIQTP-------------NNVNVQLAHEALVALGFKDTQITQ 161 >UniRef50_C0W1Q3 Possible crossover junction endodeoxyribonuclease n=2 Tax=Actinomyces RepID=C0W1Q3_9ACTO Length = 195 Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 12/199 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +G + +P +++ GG G + + + ++ G+ ++T +VRED+ L Sbjct: 1 MISFFQGEVQAIKPGHLVLVNGGFGLSIQVTVGTANQVRH-GELVGLYTSLIVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F L + +GP+ AL L ++ + AV + L ++PGIGKK+ Sbjct: 60 YGFLTEDERDTFNVLQTVSKIGPRTALQALEALTPDELRQAVISSDEKTLQRIPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+ D+ L TP ++ L + S AE E +A LV+LGY A Sbjct: 120 AQRMLIEIGDK-------LGTPTGNVKLGTTVSV----AETEVIAGLVSLGYSEVSAQAA 168 Query: 181 VSKIARPDASSETLIREAL 199 V D ++ ++R AL Sbjct: 169 VEPFQGSDMNTSEMLRAAL 187 >UniRef50_A5CS07 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Microbacteriaceae RepID=RUVA_CLAM3 Length = 214 Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 87/174 (50%), Gaps = 13/174 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ +L+EV GVGY V + EL G EA V T VVRED+ L Sbjct: 1 MISSLRGTVLSVSGQTLLLEVHGVGYGVSVTPRHALEL-RNGSEATVLTSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF E F+ L GVGPK ALA+L + + AV E+ A ++ GIG KT Sbjct: 60 FGFPGPDELRAFELLCGVTGVGPKSALAVLEHLDPEAMAQAVAAEDDAAFRRVSGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLF-TPAADLVLTSPASPATDDAEQEAVAALVALGYK 173 A+ ++++ L G LF T TS AS T D V AL+ LG+ Sbjct: 120 AKLIVLQ-------LAGKLFVTQPRARSATSAASTVTAD----VVTALIGLGWS 162 >UniRef50_B1C6M7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6M7_9FIRM Length = 199 Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/189 (29%), Positives = 105/189 (55%), Gaps = 8/189 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 M ++G + + + + IE GVG+ +++ +L ++ V+T+ VRE+ Sbjct: 1 MFDYIKGDVTDIREGYLTIENKSGVGFLLNVSENTATDLINDREDVKVYTYMAVRENDVS 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF+ ER +F +L+ +GPK+AL+ILS +S V A+ ++ +L G+GKK Sbjct: 61 LFGFSTLFEREIFFKLLTVPKIGPKIALSILSALSPNMIVAAIMNKDYKSLCTANGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AE+++V ++D+F GDL P + + + + +D + EA+ L +LG+ A++ Sbjct: 121 AAEQIVVTLQDKF----GDL--PEIEEITVNDMN-INNDLKDEAILGLTSLGFDRAYAAK 173 Query: 180 MVSKIARPD 188 +V +I+ D Sbjct: 174 IVREISVDD 182 >UniRef50_A4XJS2 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Clostridia RepID=RUVA_CALS8 Length = 197 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G I E V++ + ++ T F E G+E V+ E+ L Sbjct: 1 MIDSIVGTIQEVFNNYVILNYNNIYIKIFCNSTKFSEF--LGKEKRVYVSLKFNENLSEL 58 Query: 61 --YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 YGF ++ER LF +L K GVG KLAL ILS + QQ + + + V L K+ GIGK Sbjct: 59 ECYGFLTREERELFLKLQKVTGVGSKLALQILSSIDYQQLIVEIAKGNVARLEKVKGIGK 118 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTA R+I+E+K+ K F A+ TS T + +E AL++LGY+ E + Sbjct: 119 KTASRIILELKETLK----KEFKVAS----TSGTEEKTYEKLEEISLALLSLGYEIDEIN 170 Query: 179 RMVSKIARPDASSETLIREALR 200 +++S + S E I+ AL+ Sbjct: 171 QVLSSEDFSELSLEDGIKLALK 192 >UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F8Q5_THELT Length = 186 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 18/196 (9%) Query: 5 LRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFN 64 ++G + K V++E+ G ++ + E + GQ + TH ++ +YGF Sbjct: 3 VKGTVHSKNGSSVILEINGFLIKILCDIETL-EKAQIGQTVQLHTHLEFSQEGITIYGFL 61 Query: 65 NKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERL 124 +K+ +F++++K + +GPK AL I+S ++ V+ + ++V L + PGIGKKTAERL Sbjct: 62 SKERLYVFEKILKVSKIGPKTALRIVSTSEPEELVHLIISQDVEKLSRFPGIGKKTAERL 121 Query: 125 IVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKI 184 I E+KD + + S S D A+ ALVALG+ E+ + Sbjct: 122 IAELKDE-------------EFEIKSDYSKELSD----AIDALVALGFGKIESREAAKSV 164 Query: 185 ARPDASSETLIREALR 200 +E +++EAL+ Sbjct: 165 YHSSKKAEQIVKEALK 180 >UniRef50_B8H455 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Alphaproteobacteria RepID=RUVA_CAUCN Length = 205 Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 52/132 (39%), Positives = 73/132 (55%), Gaps = 1/132 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL- 59 MIGRLRG + E LI+V GVGY V LP G+E ++ E A L Sbjct: 1 MIGRLRGAVAEVGEEEALIDVMGVGYLVRCGHRTLQRLPALGEETLLHIESQWSESAGLR 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +++R F L GVGPK A+A+L +S + +AV RE+ A+ + G+G K Sbjct: 61 LYGFLTREDRRAFVLLQAIQGVGPKAAMAVLDVLSPAELASAVAREDKAAVGRANGVGPK 120 Query: 120 TAERLIVEMKDR 131 A R++ E+KD+ Sbjct: 121 LALRIVTELKDK 132 >UniRef50_B6ALZ0 Probable Holliday junction DNA helicase (RuvA) n=2 Tax=Leptospirillum sp. Group II RepID=B6ALZ0_9BACT Length = 208 Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL---PEAGQEAIVFTHFVVRE-D 56 MI RL G+ +E + V++ G VGY VH+ +L PE ++ HF + Sbjct: 1 MIARLWGVPVEWEEESVILRAGDVGYRVHLSPCSHQKLRSRPEGLVLELLIQHFWNEHLE 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A LL GF + +E+TLF +L K G+GP AL +L+ + F+ V + G L L G+ Sbjct: 61 APLLAGFPDPEEQTLFNQLRKVPGLGPLSALRLLA-IPVGDFLTIVRDNDAGRLKGLKGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDL--FTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+KTA +++ E++ + +PA+ SP SPA+ + V + G+ P Sbjct: 120 GEKTARKILGELRGHVDWIAESTSGLSPASG---KSPESPASLARSVQDV-LVRQFGHTP 175 Query: 175 QEASRMVSKIAR--PDASS-ETLIREALR 200 QEA R+VS+ R P SS E L +E R Sbjct: 176 QEAQRLVSEALRRQPSISSMEELFQEVYR 204 >UniRef50_A0JXB2 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Actinomycetales RepID=RUVA_ARTS2 Length = 214 Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + +I++ G G V+ L G+E +FT +VRED+ L Sbjct: 1 MISFLRGTVAHVGLSSAVIDLNGAGMSVNATPQTLSGL-RTGEEGKLFTSLIVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF++ ER +F L+ +GVGP+LALA+L+ + A + A K+PGIG K Sbjct: 60 FGFSSDDEREVFDVLLSVSGVGPRLALAVLAVHDPEAIRVAAHTGDGKAFTKVPGIGPKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E+ + P +PA+ A+ + + VAA+ +LG+ ++A+ Sbjct: 120 AGRIVLELAGK--------LVPHGTGAAAAPAAAASAPWKPQVVAAMTSLGWSEKDATSS 171 Query: 181 VSKI--ARPDASSETLIREALRAAL 203 + K P+ + + E LRA L Sbjct: 172 IDKALSDSPELEAGGQVAEILRATL 196 >UniRef50_C1TMQ3 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMQ3_9BACT Length = 202 Score = 85.9 bits (211), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 16/206 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ + G +++ + +++V G+G+E+ + L G+E + H + L Sbjct: 1 MLAMVTGTVLDVTTQMAVVDVSGLGFEMQLTRKA-SSLCSVGKEVSLHCHVQFSDAGPTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F L+ G+G KLAL +L GM+A+ V AV + L +PGIGKKT Sbjct: 60 FGFADGLEKAVFLRLLSVRGIGGKLALQVLQGMTAEAVVQAVSFGDPSGLTGVPGIGKKT 119 Query: 121 AERLIVEMKDRF-KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AER+ E++++ +GL ++V+ P S + + AL +LG++ Q +S Sbjct: 120 AERICFELQEKMSEGLPKGSTDNLREMVV--PDS-------ETVMEALESLGFQRQSSSE 170 Query: 180 MVSKIARPDAS-----SETLIREALR 200 ++ IA+ S E LI ALR Sbjct: 171 ALAAIAKKRGSVDGLGVEDLIMLALR 196 >UniRef50_C0QRQ4 Holliday junction DNA helicase RuvA n=1 Tax=Persephonella marina EX-H1 RepID=C0QRQ4_PERMH Length = 179 Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 7/145 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I K+ + +I++G V P + +++VF +++D L Sbjct: 1 MIEFLKGKIKHKKDDIYIIDLGTVALRFRSP-------SDLKDQSVVFIEMFIKDDRVEL 53 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER +F L+ NGVG K AL+IL S ++F VE ++ L G+GKKT Sbjct: 54 YGFKTPEEREIFNRLLSINGVGVKHALSILRSFSPERFFEIVENRDITTLTTAQGVGKKT 113 Query: 121 AERLIVEMKDRFKGLHGDLFTPAAD 145 A+R+++E++ + + +L D Sbjct: 114 AQRIVLELQGKLDFIENELLKDLVD 138 >UniRef50_B3R0J1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Phytoplasma mali AT RepID=RUVA_PHYMT Length = 186 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 20/199 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G ++ V+++ +GY + + FYE+ +E F HF ++E+ Q+L Sbjct: 1 MYSYIKGKVVNNGQNFVIVDNNNIGYHIIVSNPYFYEI---NKEYKFFVHFHIKENLQIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGFN+ + FK+L+ +GPK AL + + +Q A+E + L K PGIG K+ Sbjct: 58 YGFNDNKNLLFFKKLLDVPTIGPKSALMLSETDNLEQVFQAIENNDNVYLRKFPGIGIKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K DL+ + E E + L+ LG+ +E + Sbjct: 118 AQQIILKLK--------------GDLIFSEKIILNPKKTELEKI--LLNLGFVKKEIKSV 161 Query: 181 VSKIARPDASSETLIREAL 199 +++I E +++E L Sbjct: 162 LNQIDDK-KELELMLKEVL 179 >UniRef50_Q46L68 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Prochlorococcus marinus RepID=RUVA_PROMT Length = 224 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 38/87 (43%), Positives = 57/87 (65%) Query: 47 VFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREE 106 ++ H + RED LYGF +R LF+E+I NG+GP++ +A+L Q VNA+E +E Sbjct: 50 LWIHQIDREDGTSLYGFIEVNQRDLFREIISVNGIGPQIGMAMLEEFEVPQLVNAIENKE 109 Query: 107 VGALVKLPGIGKKTAERLIVEMKDRFK 133 L K GIGK+ AERLIVE++++ + Sbjct: 110 SNLLTKTQGIGKRIAERLIVELRNKLQ 136 >UniRef50_C4LIX8 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=RUVA_CORK4 Length = 207 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 16/209 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++ V+IE GVGY + L + G++A + VR+D L Sbjct: 1 MIDSLHGEVLHVGLNYVVIECSGVGYRATASPSLLGTLRK-GEDARILVTMNVRDDGIDL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F + + R +F L K +GVGP A+AI S +F + E+ L + GIGK+T Sbjct: 60 YAFESDEARQMFAMLRKVSGVGPTSAMAICSIFKPDEFARIITDEDDAELRNVKGIGKRT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQE--------AVAALVALGY 172 AER+IV++K + +F + P S ++E E ALV LG+ Sbjct: 120 AERIIVDLKSKVA-----VFDSGDS--ASEPQSGVGGNSEAEVDSGVVGTVTQALVELGF 172 Query: 173 KPQEASRMVSKIARPDASSETLIREALRA 201 ++A + + A S +++ ALR+ Sbjct: 173 PEKQAEKTATSAAAEGGSVSEILKRALRS 201 >UniRef50_C6XF74 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF74_LIBAP Length = 207 Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 3/204 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+++G I VLI+V GV Y ++ P+ L + G +F +R+D L Sbjct: 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +R F L GVG ++A+ +LS ++A + V ++ + + ++PGI K Sbjct: 61 FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++ E+K + L + + + + A++ALV LGY +A+ Sbjct: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180 Query: 181 VSKIARPD---ASSETLIREALRA 201 V + + + A +IR ALRA Sbjct: 181 VVSVLKKEKNIADDSQIIRLALRA 204 >UniRef50_A5KTE9 Holliday junction DNA helicase RuvA n=2 Tax=candidate division TM7 RepID=A5KTE9_9BACT Length = 187 Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 1/131 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + EK ++I+V GVGYEV + + EL +E ++T+ VRE + L Sbjct: 1 MIAHVVGRLTEKFIDSIIIDVNGVGYEVLVTALEYEELA-LQEEVKLYTYHHVREQVEEL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + LF+ LI G+GPK ALAILS + +A+ + G + + G+GK+T Sbjct: 60 YGFSSLAGKRLFELLITVQGIGPKAALAILSLGDPEVVRSAIASSDSGFIQRASGVGKRT 119 Query: 121 AERLIVEMKDR 131 A+R++V++ D+ Sbjct: 120 ADRVVVDLADK 130 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1QWF9 Holliday junction DNA helicase subunit RuvA n=4 ... 250 3e-65 UniRef50_C6APE4 Holliday junction DNA helicase RuvA n=4 Tax=Gamm... 249 5e-65 UniRef50_Q483C5 Holliday junction ATP-dependent DNA helicase ruv... 245 1e-63 UniRef50_Q5X5R9 Holliday junction ATP-dependent DNA helicase ruv... 241 9e-63 UniRef50_Q0A5Q3 Holliday junction ATP-dependent DNA helicase ruv... 241 1e-62 UniRef50_A6VXD2 Holliday junction ATP-dependent DNA helicase ruv... 240 3e-62 UniRef50_B5JXJ1 Holliday junction DNA helicase RuvA n=1 Tax=gamm... 236 3e-61 UniRef50_A3DBU3 Holliday junction ATP-dependent DNA helicase ruv... 236 3e-61 UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 T... 230 2e-59 UniRef50_A4EAI5 Putative uncharacterized protein n=1 Tax=Collins... 227 1e-58 UniRef50_Q31H84 Holliday junction ATP-dependent DNA helicase ruv... 226 3e-58 UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veil... 226 3e-58 UniRef50_Q6F992 Holliday junction ATP-dependent DNA helicase ruv... 225 6e-58 UniRef50_A4J536 Holliday junction ATP-dependent DNA helicase ruv... 225 8e-58 UniRef50_C9LUM4 Holliday junction DNA helicase RuvA n=1 Tax=Sele... 224 1e-57 UniRef50_A5D3G0 Holliday junction resolvasome, DNA-binding subun... 224 1e-57 UniRef50_A8PMB3 Holliday junction DNA helicase RuvA n=1 Tax=Rick... 224 2e-57 UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruv... 224 2e-57 UniRef50_Q5P2U6 Holliday junction ATP-dependent DNA helicase ruv... 224 2e-57 UniRef50_A9KNV9 Holliday junction ATP-dependent DNA helicase ruv... 223 3e-57 UniRef50_B9XLI7 Holliday junction DNA helicase RuvA n=3 Tax=Verr... 223 3e-57 UniRef50_D2QMR9 Holliday junction DNA helicase RuvA n=1 Tax=Spir... 223 4e-57 UniRef50_C0GKF3 Holliday junction DNA helicase RuvA n=1 Tax=Deth... 222 5e-57 UniRef50_A4IY85 Holliday junction ATP-dependent DNA helicase ruv... 222 6e-57 UniRef50_B9ZJ99 Holliday junction DNA helicase RuvA n=1 Tax=Thio... 221 9e-57 UniRef50_A8S4H4 Putative uncharacterized protein n=1 Tax=Clostri... 221 1e-56 UniRef50_C4KD09 Holliday junction DNA helicase RuvA n=12 Tax=Bac... 221 2e-56 UniRef50_C8W4C8 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 220 2e-56 UniRef50_C9KK52 Holliday junction DNA helicase RuvA n=1 Tax=Mits... 220 2e-56 UniRef50_B6BW72 Holliday junction DNA helicase RuvA n=1 Tax=beta... 220 2e-56 UniRef50_B5EAH2 Holliday junction ATP-dependent DNA helicase ruv... 220 2e-56 UniRef50_C8QYM5 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 220 3e-56 UniRef50_B2UKW6 Holliday junction DNA helicase RuvA n=1 Tax=Akke... 220 3e-56 UniRef50_C2FZN8 Crossover junction endodeoxyribonuclease n=2 Tax... 219 3e-56 UniRef50_B7GYB6 Holliday junction ATP-dependent DNA helicase ruv... 219 5e-56 UniRef50_A6DHC9 Holliday junction DNA helicase motor protein n=1... 218 6e-56 UniRef50_Q21HN5 Holliday junction ATP-dependent DNA helicase ruv... 218 8e-56 UniRef50_Q67Q98 Holliday junction ATP-dependent DNA helicase ruv... 217 2e-55 UniRef50_A0L4V9 Holliday junction ATP-dependent DNA helicase ruv... 216 3e-55 UniRef50_B6GE75 Putative uncharacterized protein n=2 Tax=Collins... 216 3e-55 UniRef50_Q3A231 Holliday junction ATP-dependent DNA helicase ruv... 216 4e-55 UniRef50_C0EG91 Putative uncharacterized protein (Fragment) n=1 ... 216 4e-55 UniRef50_Q2W2A3 Holliday junction ATP-dependent DNA helicase ruv... 215 6e-55 UniRef50_C0ZAN3 Holliday junction ATP-dependent DNA helicase ruv... 215 6e-55 UniRef50_C4Z030 Holliday junction ATP-dependent DNA helicase ruv... 215 7e-55 UniRef50_Q6MFA5 Holliday junction ATP-dependent DNA helicase ruv... 214 1e-54 UniRef50_C6JAH0 Holliday junction DNA helicase RuvA n=1 Tax=Rumi... 214 1e-54 UniRef50_C4V2G2 Crossover junction endodeoxyribonuclease n=1 Tax... 214 1e-54 UniRef50_Q0TP12 Holliday junction ATP-dependent DNA helicase ruv... 214 1e-54 UniRef50_C2KW74 Possible crossover junction endonuclease RuvA n=... 214 2e-54 UniRef50_A6NV14 Putative uncharacterized protein n=2 Tax=Bacteri... 214 2e-54 UniRef50_C1SHM7 Holliday junction DNA helicase, RuvA subunit n=1... 214 2e-54 UniRef50_UPI0001C37714 Holliday junction DNA helicase RuvA n=1 T... 213 2e-54 UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-he... 213 3e-54 UniRef50_C0ES21 Putative uncharacterized protein n=1 Tax=Eubacte... 212 5e-54 UniRef50_A8SPH1 Putative uncharacterized protein n=2 Tax=Clostri... 212 6e-54 UniRef50_Q2S5C8 Holliday junction ATP-dependent DNA helicase ruv... 212 7e-54 UniRef50_C7N4C8 Holliday junction DNA helicase, RuvA subunit n=4... 211 9e-54 UniRef50_B0K955 Holliday junction ATP-dependent DNA helicase ruv... 211 9e-54 UniRef50_B5JGR2 Holliday junction DNA helicase RuvA n=1 Tax=Verr... 211 1e-53 UniRef50_C8WQH8 Holliday junction DNA helicase RuvA n=2 Tax=Alic... 211 1e-53 UniRef50_Q11Z44 Holliday junction ATP-dependent DNA helicase ruv... 211 1e-53 UniRef50_Q183P4 Holliday junction DNA helicase n=7 Tax=Clostridi... 211 2e-53 UniRef50_B3QVA9 Holliday junction ATP-dependent DNA helicase ruv... 210 2e-53 UniRef50_Q0W1R7 Holliday junction resolvasome, DNA-binding subun... 209 3e-53 UniRef50_Q6GG62 Holliday junction ATP-dependent DNA helicase ruv... 209 4e-53 UniRef50_Q3ATE5 Holliday junction ATP-dependent DNA helicase ruv... 209 4e-53 UniRef50_Q5I6C8 Holliday junction DNA helicase RuvA n=17 Tax=Bac... 208 8e-53 UniRef50_C1F8Z2 Holliday junction ATP-dependent DNA helicase ruv... 208 9e-53 UniRef50_D0J979 Holliday junction DNA helicase motor protein n=2... 208 1e-52 UniRef50_A4QEN4 Holliday junction ATP-dependent DNA helicase ruv... 208 1e-52 UniRef50_A7I4H5 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 208 1e-52 UniRef50_Q2LRA9 Holliday junction ATP-dependent DNA helicase ruv... 207 2e-52 UniRef50_C6P9B0 Holliday junction DNA helicase RuvA n=1 Tax=Ther... 207 2e-52 UniRef50_C4GBB6 Putative uncharacterized protein n=1 Tax=Shuttle... 207 2e-52 UniRef50_A6TQM4 Holliday junction ATP-dependent DNA helicase ruv... 206 3e-52 UniRef50_B1I477 Holliday junction ATP-dependent DNA helicase ruv... 206 3e-52 UniRef50_A1UR85 Holliday junction ATP-dependent DNA helicase ruv... 206 3e-52 UniRef50_B5IKU6 Holliday junction DNA helicase RuvA n=1 Tax=Cyan... 206 3e-52 UniRef50_C7M5Z6 Holliday junction DNA helicase RuvA n=2 Tax=Capn... 205 7e-52 UniRef50_Q2RVF6 Holliday junction ATP-dependent DNA helicase ruv... 205 8e-52 UniRef50_B1ZN17 Holliday junction ATP-dependent DNA helicase ruv... 204 1e-51 UniRef50_A5WFC8 Holliday junction ATP-dependent DNA helicase ruv... 204 1e-51 UniRef50_C4XIJ9 Holliday junction ATP-dependent DNA helicase ruv... 204 1e-51 UniRef50_B8CXG3 Holliday junction ATP-dependent DNA helicase ruv... 204 2e-51 UniRef50_B4WL13 Holliday junction DNA helicase RuvA n=1 Tax=Syne... 203 3e-51 UniRef50_Q5NR75 Holliday junction ATP-dependent DNA helicase ruv... 203 3e-51 UniRef50_B0TF69 Holliday junction DNA helicase ruva n=1 Tax=Heli... 203 3e-51 UniRef50_C0WEE9 Holliday junction DNA helicase ruvA n=1 Tax=Acid... 203 3e-51 UniRef50_C4FZH5 Putative uncharacterized protein n=1 Tax=Abiotro... 203 4e-51 UniRef50_B2A5L5 Holliday junction ATP-dependent DNA helicase ruv... 203 4e-51 UniRef50_B3EU33 Holliday junction ATP-dependent DNA helicase ruv... 202 5e-51 UniRef50_Q2JWZ2 Holliday junction ATP-dependent DNA helicase ruv... 202 6e-51 UniRef50_Q24UN6 Holliday junction ATP-dependent DNA helicase ruv... 202 7e-51 UniRef50_Q3ZZK6 Holliday junction ATP-dependent DNA helicase ruv... 201 9e-51 UniRef50_Q7NCU2 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_Q0AX15 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_B3DZD2 Holliday junction resolvasome, DNA-binding subun... 201 1e-50 UniRef50_Q1Q054 Strongly similar to DNA helicase RuvA n=1 Tax=Ca... 201 2e-50 UniRef50_A8FFR3 Holliday junction ATP-dependent DNA helicase ruv... 201 2e-50 UniRef50_B2HN62 Holliday junction ATP-dependent DNA helicase ruv... 201 2e-50 UniRef50_C7NI46 Holliday junction DNA helicase subunit RuvA n=2 ... 200 2e-50 UniRef50_Q5L9Q7 Holliday junction ATP-dependent DNA helicase ruv... 200 2e-50 UniRef50_D1N374 Holliday junction DNA helicase RuvA n=1 Tax=Vict... 199 3e-50 UniRef50_C9LLE4 Holliday junction DNA helicase RuvA n=1 Tax=Dial... 199 3e-50 UniRef50_C7MCB9 Holliday junction DNA helicase, RuvA subunit n=1... 198 7e-50 UniRef50_Q4L6Y7 Holliday junction ATP-dependent DNA helicase ruv... 198 7e-50 UniRef50_C0GT45 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 198 7e-50 UniRef50_C6X0H6 Holliday junction DNA helicase RuvA n=1 Tax=Flav... 198 9e-50 UniRef50_C7H8Z7 Holliday junction DNA helicase RuvA n=3 Tax=Rumi... 198 9e-50 UniRef50_C8NUB4 Holliday junction DNA helicase RuvA n=1 Tax=Cory... 198 9e-50 UniRef50_B2RJ07 Holliday junction ATP-dependent DNA helicase ruv... 198 1e-49 UniRef50_C7GZ09 Holliday junction DNA helicase RuvA n=1 Tax=Euba... 197 2e-49 UniRef50_A1SJA6 Holliday junction ATP-dependent DNA helicase ruv... 197 2e-49 UniRef50_C0W3R8 Crossover junction endodeoxyribonuclease n=1 Tax... 197 2e-49 UniRef50_Q5FQC5 Holliday junction ATP-dependent DNA helicase ruv... 197 2e-49 UniRef50_C3J9S7 Holliday junction DNA helicase RuvA n=2 Tax=Bact... 196 3e-49 UniRef50_Q6A8K8 Holliday junction ATP-dependent DNA helicase ruv... 196 3e-49 UniRef50_Q8U9K5 Holliday junction ATP-dependent DNA helicase ruv... 196 3e-49 UniRef50_C9RMJ7 Holliday junction DNA helicase RuvA n=1 Tax=Fibr... 196 3e-49 UniRef50_C2D6U7 Crossover junction endonuclease RuvA n=1 Tax=Ato... 196 4e-49 UniRef50_C7RHH1 Holliday junction DNA helicase RuvA n=5 Tax=Anae... 196 4e-49 UniRef50_C5VM52 Holliday junction DNA helicase RuvA n=5 Tax=Bact... 196 4e-49 UniRef50_A5CX58 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 196 5e-49 UniRef50_C6C065 Holliday junction ATP-dependent DNA helicase ruv... 196 5e-49 UniRef50_B3DRX9 Holliday junction ATP-dependent DNA helicase ruv... 196 6e-49 UniRef50_C4LIX8 Holliday junction ATP-dependent DNA helicase ruv... 195 8e-49 UniRef50_D1PT53 Crossover junction endoribonuclease subunit A n=... 195 9e-49 UniRef50_Q6MKB7 Holliday junction ATP-dependent DNA helicase ruv... 195 9e-49 UniRef50_D1CDK2 Holliday junction DNA helicase RuvA n=1 Tax=Ther... 194 1e-48 UniRef50_B0S1J4 Holliday junction ATP-dependent DNA helicase ruv... 194 1e-48 UniRef50_C1A615 Holliday junction ATP-dependent DNA helicase ruv... 194 1e-48 UniRef50_A0JXB2 Holliday junction ATP-dependent DNA helicase ruv... 194 2e-48 UniRef50_C6XF74 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 193 2e-48 UniRef50_Q3ABX9 Holliday junction ATP-dependent DNA helicase ruv... 193 3e-48 UniRef50_B2GB19 Holliday junction ATP-dependent DNA helicase ruv... 193 3e-48 UniRef50_Q0F2I8 Putative Holliday junction DNA helicase RuvA n=1... 193 3e-48 UniRef50_B1MCJ1 Holliday junction ATP-dependent DNA helicase ruv... 193 3e-48 UniRef50_UPI000050F77A Holliday junction DNA helicase, RuvA subu... 193 3e-48 UniRef50_A8YTI1 Holliday junction ATP-dependent DNA helicase ruv... 193 3e-48 UniRef50_B0NYV4 Putative uncharacterized protein n=2 Tax=Clostri... 193 3e-48 UniRef50_B5XJ07 Holliday junction ATP-dependent DNA helicase ruv... 193 3e-48 UniRef50_A8RC90 Putative uncharacterized protein n=3 Tax=Erysipe... 193 4e-48 UniRef50_A5CEJ4 Holliday junction ATP-dependent DNA helicase ruv... 193 4e-48 UniRef50_B1W3G3 Holliday junction ATP-dependent DNA helicase ruv... 193 4e-48 UniRef50_Q4JVD8 Holliday junction ATP-dependent DNA helicase ruv... 193 4e-48 UniRef50_C8W783 Holliday junction DNA helicase RuvA n=2 Tax=Atop... 193 4e-48 UniRef50_B6YR38 Holliday junction ATP-dependent DNA helicase ruv... 193 5e-48 UniRef50_D2RLD5 Holliday junction DNA helicase RuvA n=1 Tax=Acid... 192 6e-48 UniRef50_B6XV05 Putative uncharacterized protein n=2 Tax=Bifidob... 192 8e-48 UniRef50_Q0ALX8 Holliday junction ATP-dependent DNA helicase ruv... 191 8e-48 UniRef50_B0VHI7 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 191 9e-48 UniRef50_B7K970 Holliday junction ATP-dependent DNA helicase ruv... 191 1e-47 UniRef50_A8LHP9 Holliday junction ATP-dependent DNA helicase ruv... 191 1e-47 UniRef50_UPI000196B988 hypothetical protein CATMIT_00479 n=1 Tax... 191 1e-47 UniRef50_Q1AWE1 Holliday junction ATP-dependent DNA helicase ruv... 191 1e-47 UniRef50_B8J094 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 191 1e-47 UniRef50_C1D1T9 Putative Holliday junction ATP-dependent DNA hel... 191 2e-47 UniRef50_B8DNJ8 Holliday junction ATP-dependent DNA helicase ruv... 191 2e-47 UniRef50_B8ZUI1 Holliday junction ATP-dependent DNA helicase ruv... 190 2e-47 UniRef50_Q729U3 Holliday junction ATP-dependent DNA helicase ruv... 190 2e-47 UniRef50_C0W1Q3 Possible crossover junction endodeoxyribonucleas... 190 2e-47 UniRef50_Q2FPZ9 Holliday junction DNA helicase RuvA n=1 Tax=Meth... 190 3e-47 UniRef50_A5GTL6 Holliday junction ATP-dependent DNA helicase ruv... 189 3e-47 UniRef50_A0LUK6 Holliday junction ATP-dependent DNA helicase ruv... 189 3e-47 UniRef50_Q252Y0 Holliday junction ATP-dependent DNA helicase ruv... 189 5e-47 UniRef50_D1C4E7 Holliday junction DNA helicase RuvA n=1 Tax=Spha... 188 7e-47 UniRef50_A9GQJ8 Holliday junction DNA helicase n=1 Tax=Sorangium... 188 1e-46 UniRef50_A5EXH7 Holliday junction ATP-dependent DNA helicase ruv... 188 1e-46 UniRef50_A8SLR3 Putative uncharacterized protein n=1 Tax=Parvimo... 188 1e-46 UniRef50_D0LZE6 Holliday junction DNA helicase RuvA n=1 Tax=Hali... 188 2e-46 UniRef50_D0GJ52 Holliday junction DNA helicase RuvA n=1 Tax=Lept... 186 3e-46 UniRef50_Q30R94 Holliday junction ATP-dependent DNA helicase ruv... 186 3e-46 UniRef50_B5YKF0 Holliday junction ATP-dependent DNA helicase ruv... 186 3e-46 UniRef50_A5UZS3 Holliday junction ATP-dependent DNA helicase ruv... 186 3e-46 UniRef50_Q1D2J5 Holliday junction ATP-dependent DNA helicase ruv... 186 4e-46 UniRef50_B1C6M7 Putative uncharacterized protein n=1 Tax=Anaerof... 186 5e-46 UniRef50_C0QZY1 Holliday junction DNA helicase RuvA n=1 Tax=Brac... 185 7e-46 UniRef50_C3RKD6 Holliday junction DNA helicase subunit RuvA n=3 ... 185 7e-46 UniRef50_A9NF61 Holliday junction ATP-dependent DNA helicase ruv... 185 9e-46 UniRef50_Q1GE12 Holliday junction DNA helicase RuvA n=12 Tax=Rho... 184 1e-45 UniRef50_A3CR11 Holliday junction ATP-dependent DNA helicase ruv... 184 1e-45 UniRef50_UPI000038343B COG0632: Holliday junction resolvasome, D... 184 1e-45 UniRef50_A3VP65 Holliday junction DNA helicase RuvA n=1 Tax=Parv... 184 2e-45 UniRef50_Q7V7T9 Holliday junction ATP-dependent DNA helicase ruv... 184 2e-45 UniRef50_C0ABP1 Holliday junction resolvasome DNA-binding subuni... 184 2e-45 UniRef50_C1Q8J8 Holliday junction DNA helicase subunit RuvA n=1 ... 183 2e-45 UniRef50_C7LZI9 Holliday junction DNA helicase RuvA n=1 Tax=Acid... 183 2e-45 UniRef50_B4R9Z1 Holliday junction ATP-dependent DNA helicase ruv... 183 2e-45 UniRef50_C0YLR6 Crossover junction endonuclease RuvA n=1 Tax=Chr... 183 3e-45 UniRef50_C2BWM5 Holliday junction DNA helicase motor protein n=3... 183 3e-45 UniRef50_C8NZK0 Holliday junction DNA helicase RuvA n=1 Tax=Erys... 183 3e-45 UniRef50_B1X417 Putative holliday junction DNA helicase RuvA n=1... 183 3e-45 UniRef50_Q8YZT2 Holliday junction ATP-dependent DNA helicase ruv... 183 3e-45 UniRef50_Q83GK0 Holliday junction ATP-dependent DNA helicase ruv... 183 3e-45 UniRef50_C7LQQ8 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 183 5e-45 UniRef50_B9KYT2 Holliday junction ATP-dependent DNA helicase ruv... 183 5e-45 UniRef50_D1VUW2 Holliday junction DNA helicase RuvA n=1 Tax=Pept... 182 5e-45 UniRef50_C5EYK8 Holliday junction ATP-dependent DNA helicase ruv... 181 9e-45 UniRef50_C9R8U6 Holliday junction DNA helicase RuvA n=1 Tax=Ammo... 181 1e-44 UniRef50_D1AXU1 Holliday junction DNA helicase RuvA n=1 Tax=Stre... 181 2e-44 UniRef50_C9MZD4 Holliday junction DNA helicase RuvA n=1 Tax=Lept... 181 2e-44 UniRef50_B2GIL9 Holliday junction ATP-dependent DNA helicase ruv... 181 2e-44 UniRef50_P73554 Holliday junction ATP-dependent DNA helicase ruv... 180 2e-44 UniRef50_C3WBK1 Holliday junction DNA helicase ruvA n=1 Tax=Fuso... 180 2e-44 UniRef50_C3XJP3 Holliday junction DNA helicase motor protein n=1... 180 3e-44 UniRef50_Q1J0F6 Holliday junction ATP-dependent DNA helicase ruv... 180 3e-44 UniRef50_C6JI67 Holliday junction DNA helicase ruvA n=5 Tax=Fuso... 179 5e-44 UniRef50_A6Q8H2 Holliday junction ATP-dependent DNA helicase ruv... 179 6e-44 UniRef50_C7NC64 Holliday junction DNA helicase RuvA n=2 Tax=Fuso... 177 2e-43 UniRef50_C9M7E3 Holliday junction DNA helicase RuvA n=1 Tax=Jonq... 177 2e-43 UniRef50_B9L9P0 Holliday junction ATP-dependent DNA helicase ruv... 177 2e-43 UniRef50_Q8REJ7 Holliday junction ATP-dependent DNA helicase ruv... 177 2e-43 UniRef50_UPI00016C0EB8 Holliday junction DNA helicase RuvA n=1 T... 177 2e-43 UniRef50_C1XYW5 Holliday junction DNA helicase subunit RuvA n=1 ... 176 4e-43 UniRef50_A5IKQ6 Holliday junction ATP-dependent DNA helicase ruv... 175 1e-42 UniRef50_UPI000038462D COG0632: Holliday junction resolvasome, D... 174 2e-42 UniRef50_A7VWM3 Putative uncharacterized protein n=1 Tax=Clostri... 174 2e-42 UniRef50_A5CS07 Holliday junction ATP-dependent DNA helicase ruv... 174 2e-42 UniRef50_A9B9X1 Holliday junction ATP-dependent DNA helicase ruv... 173 3e-42 UniRef50_D2MP66 Holliday junction DNA helicase RuvA n=1 Tax=Bull... 172 7e-42 UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1... 172 7e-42 UniRef50_C0VVS8 Holliday junction DNA helicase motor protein n=2... 171 1e-41 UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruv... 171 1e-41 UniRef50_A5KTE9 Holliday junction DNA helicase RuvA n=2 Tax=cand... 171 2e-41 UniRef50_A8UZA0 Holliday junction resolvasome DNA-binding subuni... 170 2e-41 UniRef50_Q5GT34 Holliday junction ATP-dependent DNA helicase ruv... 170 2e-41 UniRef50_A0RP49 Holliday junction ATP-dependent DNA helicase ruv... 170 2e-41 UniRef50_Q2RHT6 Holliday junction ATP-dependent DNA helicase ruv... 169 7e-41 UniRef50_C7TAK4 Holliday junction DNA helicase RuvA n=9 Tax=Lact... 168 9e-41 UniRef50_B2S3D5 Holliday junction ATP-dependent DNA helicase ruv... 168 1e-40 UniRef50_Q7U7F0 Holliday junction ATP-dependent DNA helicase ruv... 166 4e-40 UniRef50_C1TMQ3 Holliday junction DNA helicase, RuvA subunit n=1... 166 4e-40 UniRef50_C1DXL3 Holliday junction DNA helicase RuvA n=3 Tax=Sulf... 165 1e-39 UniRef50_B8H455 Holliday junction ATP-dependent DNA helicase ruv... 164 1e-39 UniRef50_UPI0001C338F3 Holliday junction DNA helicase, RuvA subu... 164 1e-39 UniRef50_A6GER9 Holliday junction DNA helicase motor protein n=1... 164 1e-39 UniRef50_D1Y1N8 Holliday junction ATP-dependent DNA helicase Ruv... 164 1e-39 UniRef50_Q7VCI6 Holliday junction ATP-dependent DNA helicase ruv... 163 3e-39 UniRef50_A4XJS2 Holliday junction ATP-dependent DNA helicase ruv... 163 4e-39 UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae... 162 5e-39 UniRef50_Q3YRE0 Holliday junction ATP-dependent DNA helicase ruv... 161 1e-38 UniRef50_B0PAT7 Putative uncharacterized protein n=1 Tax=Anaerot... 160 3e-38 UniRef50_Q03B18 Holliday junction ATP-dependent DNA helicase ruv... 160 3e-38 UniRef50_UPI0001C31CBF Holliday junction DNA helicase RuvA n=1 T... 159 6e-38 UniRef50_C3XDN4 Holliday junction DNA helicase motor protein n=1... 158 1e-37 UniRef50_C0QRQ4 Holliday junction DNA helicase RuvA n=1 Tax=Pers... 158 1e-37 UniRef50_B1H0B1 Holliday junction ATP-dependent DNA helicase ruv... 158 1e-37 UniRef50_A7HL71 Holliday junction ATP-dependent DNA helicase ruv... 157 2e-37 UniRef50_B2KCD9 Holliday junction ATP-dependent DNA helicase ruv... 156 6e-37 Sequences not found previously or not previously below threshold: >UniRef50_Q1QWF9 Holliday junction DNA helicase subunit RuvA n=4 Tax=Proteobacteria RepID=Q1QWF9_CHRSD Length = 206 Score = 250 bits (638), Expect = 3e-65, Method: Composition-based stats. Identities = 106/199 (53%), Positives = 135/199 (67%), Gaps = 1/199 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG ++EKQPP ++++VGGVGYE+ MT LP G+E + TH VREDA LL Sbjct: 3 MIGRLRGTLLEKQPPWIVVDVGGVGYELETSMTTLLALPGPGEEVQLHTHLAVREDAHLL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ER LF+ LIK NGVGPKLALAILSGM + F+ V +++ AL +LPG+GKKT Sbjct: 63 YGFARGDERQLFRALIKVNGVGPKLALAILSGMDQEAFIRCVMEDDIKALTRLPGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VEM+DRF + L L + + A D + +A +ALVALGYKP EASRM Sbjct: 123 AERLVVEMRDRFPHWQLEQENGLHALELGASPTTAAPDPQADAESALVALGYKPTEASRM 182 Query: 181 VSKIARPDASSETLIREAL 199 +S + S+E LI+ AL Sbjct: 183 LSGL-DDGLSTEGLIKAAL 200 >UniRef50_C6APE4 Holliday junction DNA helicase RuvA n=4 Tax=Gammaproteobacteria RepID=C6APE4_AGGAN Length = 204 Score = 249 bits (636), Expect = 5e-65, Method: Composition-based stats. Identities = 124/204 (60%), Positives = 157/204 (76%), Gaps = 1/204 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L GI++EKQPP +L++V GVGYE+ +PMT FY LPE G++ +FTH VVREDA LL Sbjct: 1 MIGHLTGILMEKQPPEILLDVQGVGYELLLPMTSFYNLPEVGKQTSLFTHLVVREDAHLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+ K +RTLF+ELIKTNGVGPKLALAILS MS +F A+EREE+ LVK+PGIGKKT Sbjct: 61 FGFSQKTDRTLFRELIKTNGVGPKLALAILSAMSVDEFAYAIEREELSRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERL+VE+K +FK + D F L + + AT + EAVAAL+ALGYKP +A + Sbjct: 121 AERLLVELKGKFKEVKTHDFFVQGDHLPSVNAETVATIEPSNEAVAALIALGYKPLDAEK 180 Query: 180 MVSKIARPDASSETLIREALRAAL 203 MV K+++P+ SSE LIREAL+AAL Sbjct: 181 MVKKVSKPELSSEQLIREALKAAL 204 >UniRef50_Q483C5 Holliday junction ATP-dependent DNA helicase ruvA n=346 Tax=Gammaproteobacteria RepID=RUVA_COLP3 Length = 211 Score = 245 bits (625), Expect = 1e-63, Method: Composition-based stats. Identities = 111/211 (52%), Positives = 144/211 (68%), Gaps = 8/211 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG+++EK P +LIE GVGYEV MPMT Y LPE Q+A ++THFVVREDAQLL Sbjct: 1 MIGRLRGMLVEKNSPEILIECAGVGYEVTMPMTSIYALPELEQQATIYTHFVVREDAQLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK ER LF+ LIK NGVGPKLALAILS MSA QFV+ V +++ A+VK+PG+GKKT Sbjct: 61 YGFANKVERKLFRLLIKVNGVGPKLALAILSNMSADQFVSCVRHDDISAIVKIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHG--------DLFTPAADLVLTSPASPATDDAEQEAVAALVALGY 172 AERL++EM+DR K D P S + +D + +A+ AL++LGY Sbjct: 121 AERLLIEMRDRLKDWQAQQIHLVSDDGVIPEQLSAELSQETTFVNDNKGDAINALLSLGY 180 Query: 173 KPQEASRMVSKIARPDASSETLIREALRAAL 203 K +A + V + SSE +IR+AL++ + Sbjct: 181 KQVQADKAVKSVYNRGMSSENIIRDALKSMI 211 >UniRef50_Q5X5R9 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Legionella RepID=RUVA_LEGPA Length = 199 Score = 241 bits (617), Expect = 9e-63, Method: Composition-based stats. Identities = 96/201 (47%), Positives = 133/201 (66%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEK-QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G II+K QP ++++V GVGY+V + F+++ Q + H +VREDA L Sbjct: 1 MIGWLHGQIIDKHQPGKLVLDVNGVGYDVETSLNTFFQIENGNQPIGLHIHTIVREDALL 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +K+ER+LF+ LIK NGVGPKLA+ +LS +S ++F+ + +E L KLPGIGKK Sbjct: 61 LYGFLDKEERSLFRSLIKVNGVGPKLAMTVLSSISPKEFIQCIHQENAALLTKLPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERL+VEM+D K G + T + ++QEA++AL ALGYKPQEA + Sbjct: 121 TAERLVVEMRDSIKQFDGSVSD-------TFQKQAGSTHSQQEAISALEALGYKPQEAWK 173 Query: 180 MVSKIARPDASSETLIREALR 200 +V+KI + S E LIREAL+ Sbjct: 174 VVNKIDNGNKSCEQLIREALQ 194 >UniRef50_Q0A5Q3 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Proteobacteria RepID=RUVA_ALHEH Length = 208 Score = 241 bits (615), Expect = 1e-62, Method: Composition-based stats. Identities = 104/207 (50%), Positives = 140/207 (67%), Gaps = 4/207 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G + E+ PP +L++VGGVGYE+ PM+ FY LP Q ++TH VR+D Q L Sbjct: 1 MIGRLHGTVAERHPPALLLDVGGVGYELEAPMSTFYALPAGDQAVTLWTHLAVRDDGQAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ER LF+ LI+ +GVGPKLALA+LSGM+A+ +ERE+V L +LPG+G+KT Sbjct: 61 YGFASRAERDLFRVLIRISGVGPKLALALLSGMNAEGLQRCIEREDVATLTRLPGVGRKT 120 Query: 121 AERLIVEMKDRFKGL--HGDLFTPAADLVLTSPASPATD-DAEQEAVAALVALGYKPQEA 177 A+RLIVE++DR GL PA +PA + ++AV+ALVALGYKP EA Sbjct: 121 AQRLIVELRDRLDGLLPAASGGVPARTGSGEQLDAPAGPQGSREDAVSALVALGYKPAEA 180 Query: 178 SRMVSKIAR-PDASSETLIREALRAAL 203 R+V+ + D SE LIR AL+AA+ Sbjct: 181 GRLVNAVPGANDLPSEELIRRALQAAV 207 >UniRef50_A6VXD2 Holliday junction ATP-dependent DNA helicase ruvA n=30 Tax=Proteobacteria RepID=RUVA_MARMS Length = 200 Score = 240 bits (612), Expect = 3e-62, Method: Composition-based stats. Identities = 94/203 (46%), Positives = 138/203 (67%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ G +IEK PP ++++V G+GYEV MT Y+LP+ G + +FTH +V+ED+ L Sbjct: 1 MIGRIVGTLIEKTPPELMVDVNGIGYEVSASMTTIYDLPQIGGQVTLFTHLLVKEDSHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K ER LF+ LIK NG+GPK+ALAILS MS+++ + V+ +V AL ++PG+GKKT Sbjct: 61 YGFIDKNERALFRVLIKVNGIGPKMALAILSSMSSEELITNVQESDVTALTRIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLI+E++D+ A ++ A P QEA AAL++LGYKPQEA++ Sbjct: 121 AERLIIELRDKLGQAAKTDLFSAPAVLRQVQADP-----RQEAEAALISLGYKPQEAAKA 175 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ + A+SE +I+ AL+ L Sbjct: 176 IAGVPVDAANSEDVIKAALKGML 198 >UniRef50_B5JXJ1 Holliday junction DNA helicase RuvA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXJ1_9GAMM Length = 205 Score = 236 bits (604), Expect = 3e-61, Method: Composition-based stats. Identities = 99/203 (48%), Positives = 129/203 (63%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G +I KQ P +L++V GVGYEV P++ +ELP GQ +V H VREDA L Sbjct: 1 MIGRLSGTLISKQAPHLLVDVNGVGYEVEAPLSTVFELPAEGQAVVVLIHTHVREDAIQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 + F ER F+ LIK NGVG K+ALAI+SG SA+ F V++E+ AL KLPG+GKKT Sbjct: 61 FAFGTDIERRFFRSLIKINGVGAKMALAIMSGASAETFAQWVDQEDTAALTKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++EM+DR P+ S + A E EAVAAL LGY+ EA +M Sbjct: 121 AERLVIEMRDRLDKEVFMGAVPSLPKAGVSATASAPMSREDEAVAALEGLGYRAAEARKM 180 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+K+A+ D +E +IR AL+ L Sbjct: 181 VAKVAQDDLPTEEMIRLALQQTL 203 >UniRef50_A3DBU3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Clostridium RepID=RUVA_CLOTH Length = 202 Score = 236 bits (603), Expect = 3e-61, Method: Composition-based stats. Identities = 76/201 (37%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG + K +++E GVGY + ++ + E GQE V+T+ VRED L Sbjct: 1 MFAYIRGRLEYKNNDFLIVESNGVGYRIFTSLSTISGIGEIGQEVKVYTYLYVREDVISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E +F+ LI +GVGPK A+++LS +S +F AV ++V L K GIGKK Sbjct: 61 YGFLTQEELNVFELLISVSGVGPKAAVSVLSAISPSRFSLAVITDDVKTLTKAQGIGKKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K + T A EAV+AL+ LGY P EA++ Sbjct: 121 AQRIILELKDKIKK---EQLTEYAQSEEGGKVLDTDSSKMAEAVSALMVLGYSPAEANKA 177 Query: 181 VSKIARPDASSETLIREALRA 201 VS + R D ET+I+ AL+ Sbjct: 178 VSAVYREDMDIETIIKNALKG 198 >UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCB68 Length = 200 Score = 230 bits (587), Expect = 2e-59, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 5/199 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + P ++V VGY V + L G+E +++ H VREDA LL Sbjct: 1 MIGFLRGKVTYTFPDYCFLDVHDVGYRVFVSHQTRNHL-SVGEEVMLYIHTHVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF+ LI +G+GPK+A ILS ++A +F + +++V A+ KLPGIGKKT Sbjct: 60 YGFFSQEEYDLFQHLIGISGIGPKVAQGILSAITANEFYRLIHQKDVKAITKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ F + + + + D EA AL+ LG+ E + Sbjct: 120 AERIILELKDKLTS---SSFDDDSFADHAAGFADSMGDKISEATEALLNLGFGQSEIQSV 176 Query: 181 VSKIARPDASSETLIREAL 199 + K + S+E +IR AL Sbjct: 177 LKKKMDWE-STEEIIRYAL 194 >UniRef50_A4EAI5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI5_9ACTN Length = 206 Score = 227 bits (580), Expect = 1e-58, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 113/200 (56%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L G ++E +++V GVG+E+ + + LP G E ++T VREDA L Sbjct: 1 MISQLHGTLVEATMSSAVVDVSGVGFELGISGSTAATLPTPGGEVRLYTRMQVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K ERT+F L+ +GVGP+LALA+LS + Q + V E+ + K+PG+GKKT Sbjct: 61 FGFASKDERTMFDRLVSVSGVGPRLALAVLSTYTVGQLYSLVMAEDDKGMAKVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K F G + A + P A A +A AAL+++G+ PQE Sbjct: 121 AQRLILELKSTFAKDKGFVPVDAIPGQVAMPVPAAAPSAIDDARAALLSMGFSPQETDVA 180 Query: 181 VSKIARPDASSETLIREALR 200 +S D E L+ AL+ Sbjct: 181 LSGYDGQDMRVEDLLGAALK 200 >UniRef50_Q31H84 Holliday junction ATP-dependent DNA helicase ruvA n=7 Tax=Gammaproteobacteria RepID=RUVA_THICR Length = 200 Score = 226 bits (578), Expect = 3e-58, Method: Composition-based stats. Identities = 94/202 (46%), Positives = 130/202 (64%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + K PP +LI V GVGYEV PM+ FY + E G E ++ TH VREDA LL Sbjct: 1 MIGFLSGTLHAKLPPQILINVNGVGYEVEAPMSTFYAIGEVGDEVMLLTHMHVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ ER+LFKELIK NG+G K+A+ ILS MS FV V+ + AL K+PG+GKKT Sbjct: 61 FGFASELERSLFKELIKVNGIGAKMAIGILSAMSVNDFVGLVDVGDAPALTKIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++EM+DR KG ++++ + S A + + AV AL++LGYK +A +M Sbjct: 121 AERLVIEMRDRLKGWGNGA---SSNVSSKTMVSSAPHNQKASAVEALISLGYKTAQADKM 177 Query: 181 VSKIARPDASSETLIREALRAA 202 V + S E I++AL++ Sbjct: 178 VQAV-ESGLSLEETIKKALQSV 198 >UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veillonella RepID=D1BLL7_VEIPT Length = 202 Score = 226 bits (577), Expect = 3e-58, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG +RGI+ ++V GVGY V++P T +L E G EA +FT+ VREDA L Sbjct: 1 MIGYVRGIVTHLFKESCYVDVHGVGYRVYVPTTTRQQLTE-GHEATLFTYLNVREDAMQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF LI +G+GPK+ L ILSGM+ + F A+ +V L KLPGIGKK+ Sbjct: 60 YGFWTEEEYELFILLISVSGIGPKVGLGILSGMTPEAFKLAIINGQVQQLTKLPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+KD+ + A P A EA+ ALV+LGY ++ + + Sbjct: 120 AERLVLELKDKIAKM---THISAESPAAIQPIGVTASGAAGEAIEALVSLGYSERDVADI 176 Query: 181 VSKIARPDASSETLIREAL 199 V + LI+ +L Sbjct: 177 VESLDDGKRDVSELIKVSL 195 >UniRef50_Q6F992 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Acinetobacter sp. ADP1 RepID=RUVA_ACIAD Length = 201 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 86/203 (42%), Positives = 133/203 (65%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + P VL+ V GVGYE+ P++ F +L + GQ ++TH VVREDAQ L Sbjct: 1 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQL-QKGQHVTLWTHLVVREDAQQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + QE+ +F+ L+K NGVGPK+AL ILS +S + F++ +E +++ L+K+PG+G+KT Sbjct: 60 YGFIDAQEKLIFRTLLKVNGVGPKMALGILSTLSIELFIHTIEHDDINTLIKVPGVGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++DRFK L + V ++ +++ EA AAL +LGYKP EA + Sbjct: 120 AERLMIELRDRFKAL--SVQATTGSTVTSAQIQFSSNSPIAEAEAALQSLGYKPIEAQKA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ + + LIR AL++ + Sbjct: 178 IAAVKADYTEAADLIRAALKSMM 200 >UniRef50_A4J536 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RUVA_DESRM Length = 199 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 11/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++ P V+I+V G+GY V +P T +LP G E +FTH VRED Sbjct: 1 MIAYIKGLLAADGPGWVVIDVNGIGYHVSIPSTT--QLPALGHEVKLFTHMSVREDGIQF 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ F L+ GVGPK+ALA++S + +A+ E+V LVK+PG+GKKT Sbjct: 59 FGFAKEDEKECFLLLLNVAGVGPKVALAVVSHLPPSNLRSAIAIEDVNQLVKVPGVGKKT 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ KG+ AA T S T + EAV AL+ALGY EA Sbjct: 119 AQRILLELKDKLKGM-------AAVEHSTLQQSVITTGSGDEAVEALLALGYSQGEARDA 171 Query: 181 VSKIAR--PDASSETLIREALR 200 V K + P+ LI+ AL+ Sbjct: 172 VKKAQKSAPEEDLSALIKIALK 193 >UniRef50_C9LUM4 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUM4_9FIRM Length = 201 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + ++V GVGY V + L G+E +FTH VREDA L Sbjct: 1 MIGFLRGKVARLSLDFCFLDVAGVGYRVFISGATHGRL-HMGEEVTLFTHLAVREDAMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF+ LI G+GPK AL ILS ++ + AV ++ L K PGIGKK+ Sbjct: 60 YGFFSEEEYELFQMLISVTGIGPKAALGILSNITPENLCLAVRNKKADILTKAPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ KG + + +L P D EA AAL++LGY E + + Sbjct: 120 AERIILELKDKMKGFMTEHEAIVEEGLL---EEPVEDTMLAEAGAALLSLGYTQAEFTPI 176 Query: 181 VSKIARPDASSETLIREALR 200 + + + +E LIR AL+ Sbjct: 177 LRRA-KDCKDAEALIRFALK 195 >UniRef50_A5D3G0 Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3G0_PELTS Length = 211 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 13/202 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + E Q V+++VGG+GY V +P++ +LP G++ +++TH VRE+ L Sbjct: 16 MISYIKGKLAEVQAGAVVLDVGGIGYRVQVPLSVLNKLPARGEDVLLYTHLAVREEGFFL 75 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+++ E F +L+ +G+GPK+ALAIL+ S + + + AL ++PG+GKKT Sbjct: 76 YGFSDQNELGFFLKLLGVSGIGPKVALAILTIFSPDELGRIIIGGDTAALTRVPGVGKKT 135 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ + L E +AV AL ALGY EA + Sbjct: 136 AGRIILELKDKV-----------TETTLEREPLSGRSGVEADAVEALEALGYTAAEALKA 184 Query: 181 VSKIAR--PDASSETLIREALR 200 V ++ + S+ ++REALR Sbjct: 185 VKEVLKGPGQPSAAEIVREALR 206 >UniRef50_A8PMB3 Holliday junction DNA helicase RuvA n=1 Tax=Rickettsiella grylli RepID=A8PMB3_9COXI Length = 199 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI RLRGI++EKQPP++L+EV YE+ M FY+LP G++ ++T F+VRED Sbjct: 1 MINRLRGILVEKQPPILLVEVANAFTYEIQASMHTFYQLPHCGEKVFLYTQFIVREDGHF 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+ +ER LF +L+K +GVGPK+AL ILS + +FV+ VE++ V +L +PGIGKK Sbjct: 61 LYGFSTPEERFLFTQLLKVSGVGPKVALGILSKIEVTEFVSCVEQQNVNSLQAVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERLI+EM+DR + L + +L + +Q+A+AAL+ALGYK QEASR Sbjct: 121 TAERLIIEMRDRLRNLSHNQPE-----ILDKNTIQSLKHIQQDAIAALMALGYKNQEASR 175 Query: 180 MVSKIARPDASSETLIREAL 199 V +I S E LIR AL Sbjct: 176 AVLRIKDASLSLEALIRHAL 195 >UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Xanthomonadaceae RepID=RUVA_STRM5 Length = 197 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 87/203 (42%), Positives = 131/203 (64%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRGI+ K PP ++++V GVGYE+ PM+ FY+LPE G+E ++TH+ +ED+ L Sbjct: 1 MIGRLRGIVAYKAPPWLVVDVNGVGYELEAPMSTFYDLPELGREVTLYTHYSQKEDSVSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LF+++ K +G+G K+ALA+LSG++ ++F V+ ++ AL ++PGIGKKT Sbjct: 61 YGFLREGERRLFRDVQKVSGIGAKIALAVLSGVTVEEFARMVQAGDITALTRIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E++DR P + PA D +A AL LGYKP EA+RM Sbjct: 121 AERMVLELRDRAAQFGAGGALPTG-------SGPAPADPLSDATVALQQLGYKPAEAARM 173 Query: 181 VSKIARPDASSETLIREALRAAL 203 + +IR+AL++AL Sbjct: 174 AREAFNEGDEVAIVIRKALQSAL 196 >UniRef50_Q5P2U6 Holliday junction ATP-dependent DNA helicase ruvA n=102 Tax=Proteobacteria RepID=RUVA_AZOSE Length = 199 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 82/200 (41%), Positives = 121/200 (60%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ GI++EK PP ++++ GVGYE+ +PM+ FY LP G+ +FTH +RED L Sbjct: 1 MIGRITGILLEKNPPQIVVDTHGVGYEIDVPMSTFYGLPATGESLSLFTHLAIREDGHFL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F++L+K +G+G + AL++LSG+S AV +E G LVK+PGIGKKT Sbjct: 61 YGFASADERAAFRQLLKVSGIGARTALSVLSGLSVSDLAQAVALQETGRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++D+ PA D+ + + AL+ALGY +EA Sbjct: 121 AERLLLELRDKLGRALPGFGASTVPGAAAQPA-----DSRSDILNALLALGYSDKEAQSA 175 Query: 181 VSKIARPDASSETLIREALR 200 + I P+ IR+AL+ Sbjct: 176 LKAIP-PETGVSDGIRQALK 194 >UniRef50_A9KNV9 Holliday junction ATP-dependent DNA helicase ruvA n=35 Tax=Bacteria RepID=RUVA_CLOPH Length = 203 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G + E + V+++ G+GYE+ +P T LP G + T+ VRED L Sbjct: 1 MLAFIQGELAEVKENYVVVDNNGMGYEIFIPHTVHSYLPAIGDKVKFHTYLQVREDGMAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF N+++ +FK LI NG+GPK A+ ILS +S AV E+V A+ K PGIG KT Sbjct: 61 FGFLNREDLAMFKLLITVNGIGPKGAIGILSAISTDDLRFAVLAEDVKAISKAPGIGTKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +LI+E+KD+FK T ++ V+++ D +EA+ ALVALGY +A + Sbjct: 121 ASKLILELKDKFKLEDAFEATFQSNQVISTGGKGNNDGIREEAIQALVALGYSATDALKA 180 Query: 181 VSKIA-RPDASSETLIREALR 200 V + + +SE +++ +LR Sbjct: 181 VKAVEITSNMTSEDVLKFSLR 201 >UniRef50_B9XLI7 Holliday junction DNA helicase RuvA n=3 Tax=Verrucomicrobia RepID=B9XLI7_9BACT Length = 201 Score = 223 bits (569), Expect = 3e-57, Method: Composition-based stats. Identities = 79/204 (38%), Positives = 114/204 (55%), Gaps = 10/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++E P V ++V GVGYEV +P++ F +LP+ G E + TH +REDA +L Sbjct: 1 MINFLHGKLVEALPTQVTVDVNGVGYEVLIPLSSFDKLPQPGGEVKLLTHLAIREDAHVL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF ER +F+ L+ G+GPKLAL ILSGM+ AV +V +L ++ G+GKK Sbjct: 61 YGFMTAGEREMFRLLMNTVTGIGPKLALNILSGMNVTMLRGAVSNGDVKSLSQISGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAER++VE+KD+ + D +AV AL+ALG+K EA Sbjct: 121 TAERIVVELKDKMGAAGAWE------AASAQRSLSEPDQRVNDAVLALMALGFKQPEAHD 174 Query: 180 MVSK---IARPDASSETLIREALR 200 V + A+ E L+R +L+ Sbjct: 175 TVRSAQVLLGQQATVEDLVRASLK 198 >UniRef50_D2QMR9 Holliday junction DNA helicase RuvA n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QMR9_9SPHI Length = 198 Score = 223 bits (568), Expect = 4e-57, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + K+ V+I+V GVGY VH+ + + LP G +F H + RED+Q L Sbjct: 1 MIAYLDGTLSHKEATHVIIDVHGVGYSVHISLQTYAVLPGGGDRIKLFIHHLFREDSQSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF N E++LF +LI +GVGP AL +LS M A+ E V A+ + GIG KT Sbjct: 61 YGFANADEKSLFLDLIGVSGVGPNTALGMLSAMQPGDLRLAILGENVRAVQAIKGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++D+ K P+ A + +E++AALVALG+ A + Sbjct: 121 AQRIILELRDKMKRAGVVPDGPSYR------QQAAANPVREESLAALVALGFPKPTAEKS 174 Query: 181 VSKIARPD--ASSETLIREALR 200 V + D S E +IR ALR Sbjct: 175 VDDALKADPALSVEDVIRRALR 196 >UniRef50_C0GKF3 Holliday junction DNA helicase RuvA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKF3_9FIRM Length = 200 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG +++K V+++ G+G+++ +P T L +E +FT+ VRED L Sbjct: 1 MFNYIRGTLVQKGKDTVVLDNQGIGWQISVPSTVLSGLHSLDEEVKLFTYLAVREDDLHL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +LFK LI +G+GPK AL ILS +SA +F AV E V AL ++PG+G K+ Sbjct: 61 YGFLTADDLSLFKLLISVSGIGPKAALGILSSLSAAEFHLAVMHENVKALTRVPGVGPKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+K++ L V +P + T A +A+ ALVALGY EA Sbjct: 121 AKRLIVELKEKVAALG------TPQTVSATPQAGGTTSAYHDALEALVALGYNGSEAQAA 174 Query: 181 VSKIARPD-ASSETLIREAL 199 + I D S+E LI++AL Sbjct: 175 LQTIEDADRLSTEELIKKAL 194 >UniRef50_A4IY85 Holliday junction ATP-dependent DNA helicase ruvA n=18 Tax=Francisella RepID=RUVA_FRATW Length = 216 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 135/212 (63%), Gaps = 9/212 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++IEK P +LI+V G+GYEV +PMT FY L + + ++THF+VREDAQ L Sbjct: 1 MISFIKGVLIEKDPTALLIDVNGIGYEVFVPMTTFYTLGDIDSQVSLYTHFIVREDAQQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K ++ +F+ELIK NG+G + A+AILSGM ++ ++ +E ++ L +PGIGKKT Sbjct: 61 YGFKSKVDKKVFQELIKVNGIGARTAIAILSGMDSKTLLHCIENKDYALLATVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA---------TDDAEQEAVAALVALG 171 AERL+VE+ D+ + +++ + TS S A + E+V AL+ALG Sbjct: 121 AERLVVEIYDKLLKMANEIYAQTSGTTTTSQDSQAQQAPTSVVLANSIFNESVDALLALG 180 Query: 172 YKPQEASRMVSKIARPDASSETLIREALRAAL 203 YK ++A +M ++ +IR+AL+ ++ Sbjct: 181 YKQKDAEKMARSAMGDATTAAEVIRKALQGSI 212 >UniRef50_B9ZJ99 Holliday junction DNA helicase RuvA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJ99_9GAMM Length = 201 Score = 221 bits (565), Expect = 9e-57, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 123/203 (60%), Gaps = 4/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL G +I ++ V+I+ GGVGYEV +P++ LPE G ++ TH VVREDA L Sbjct: 1 MIARLEGTLISREVNGVVIDAGGVGYEVEVPLSTLAALPEPGATVVLTTHLVVREDAHQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K++R LF+ LI+ NG+G KLALA+LS + + + +V L K+PGIGK+T Sbjct: 61 FGFMHKRDRDLFRRLIRVNGIGAKLALAMLSTYAGDELAGLISGGDVTGLAKVPGIGKRT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+ +R + AD P + + EA+AAL +LGY A +M Sbjct: 121 AERVVLELGERLAEMGFAAAPGGADAGADIPGAA----MDGEALAALESLGYPRASAEKM 176 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ + S E+L+R ALRA + Sbjct: 177 VAAVRDQADSVESLVRLALRATV 199 >UniRef50_A8S4H4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4H4_9CLOT Length = 209 Score = 221 bits (563), Expect = 1e-56, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 122/204 (59%), Gaps = 4/204 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ + ++++E G VG +H+P++ ELP G+E V+T+F VREDA L Sbjct: 1 MISYVKGPLMAIEEDVIVVEAGHVGLAIHVPVSLLPELPGMGKEVTVYTYFQVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + Q+R +F++L+ NG+GPK AL ILS + A+ E+V AL K PGIG KT Sbjct: 61 YGFLHSQDRDMFRQLLGVNGIGPKGALGILSVLRPDDLRLAIVSEDVKALAKAPGIGNKT 120 Query: 121 AERLIVEMKDRFKG---LHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 A+RLI+++KD+ L T + +A +EAV ALVALGY EA Sbjct: 121 AQRLILDLKDKISMDDVLGNMAGGAGMGAADTGASVAGLVEAAKEAVQALVALGYTNTEA 180 Query: 178 SRMVSKIARPD-ASSETLIREALR 200 SR V ++ D +SE +++ +L+ Sbjct: 181 SRAVKQVEVTDGMTSEDVLKASLK 204 >UniRef50_C4KD09 Holliday junction DNA helicase RuvA n=12 Tax=Bacteria RepID=C4KD09_THASP Length = 200 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 89/201 (44%), Positives = 127/201 (63%), Gaps = 5/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ G ++EK PP +L++ GVGYE+ +PM+ FY LP G + THFVVRED L Sbjct: 1 MIGRITGTLLEKNPPQILVDAHGVGYEIDVPMSTFYNLPATGGTVSLHTHFVVREDGHFL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ER F++L+K +GVG ++ALA+LSG+S AV +E G LVK+PGIGKKT Sbjct: 61 FGFATEEERATFRQLLKVSGVGARMALAVLSGLSVNDLAQAVALQEAGRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++D+ G L + A A DA+ + + AL+ALGY +EA Sbjct: 121 AERLLLELRDKL----GKALPSMTGARLAAAAPGAAPDAKSDILNALLALGYNEREALSA 176 Query: 181 VSKIARPDASSETLIREALRA 201 + +A D IR+AL+A Sbjct: 177 MKGLA-EDVGVSDGIRQALKA 196 >UniRef50_C8W4C8 Holliday junction DNA helicase RuvA n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4C8_DESAS Length = 203 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 82/203 (40%), Positives = 125/203 (61%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I+ + V+++V GVGY + +P +C +LP AG+E ++ T+ V+ED+ L Sbjct: 1 MIAFLRGKIVFIEANSVVLDVSGVGYRIFVPASCQSKLPAAGEEMLLLTYLSVKEDSLQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +QER LF L+ G+GPK AL++LS +S Q AV RE++ A++K+PGIGKKT Sbjct: 61 YGFIEQQERELFVMLLNVGGIGPKGALSVLSCLSPAQLYLAVAREDIKAVMKVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+KD+ KG + V S + ++A+ AL ALGY EA + Sbjct: 121 AQRLILELKDKLKGRVQPGEETTPETVSGS------QNEAEDALFALEALGYSVSEAIVV 174 Query: 181 VSKIAR---PDASSETLIREALR 200 V ++ R + S+ L++ AL+ Sbjct: 175 VQEVLRSSSKNISASELLKNALQ 197 >UniRef50_C9KK52 Holliday junction DNA helicase RuvA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK52_9FIRM Length = 199 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 122/201 (60%), Gaps = 6/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G +I L++V GVGY V + + +L +EA +FT+ VREDA +L Sbjct: 1 MIGYLHGRVIALYTDYCLLDVHGVGYRVFLANSTRAKL-RLKEEASLFTYTSVREDAIVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF +LI +G+GPK+AL ILS ++ + A++ ++ L KLPGIGKK+ Sbjct: 60 YGFATEEEYELFLQLIGVSGIGPKVALGILSAITVESLCRAIQNKQASVLTKLPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLI+E+KD+ + +L+ + DDA EA+AAL +LGY E + + Sbjct: 120 AERLILELKDKVAF----ADSGEEELLTIENEAEVGDDAVAEAMAALQSLGYTQAEIAPV 175 Query: 181 VSKIARPDASSETLIREALRA 201 + K A+ ++E +I+E+L+A Sbjct: 176 IRKTAK-YKTTEAIIKESLKA 195 >UniRef50_B6BW72 Holliday junction DNA helicase RuvA n=1 Tax=beta proteobacterium KB13 RepID=B6BW72_9PROT Length = 189 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 126/200 (63%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG +RGI+I++ PP V ++ GG+GYE+ +PM+ +Y LPE + + H VVREDAQLL Sbjct: 1 MIGSIRGILIDRSPPWVQVDCGGIGYEIEVPMSTYYHLPELQSDIFLHVHMVVREDAQLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E++ FK LIK NG+G K+AL+ILSG+S QF NA+E+++V LVK+PGIG+KT Sbjct: 61 FGFLTKEEKSSFKSLIKINGIGAKVALSILSGVSMDQFSNAIEQQDVSLLVKIPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE+KD+ L S + + AL ALGY + ++ Sbjct: 121 AERLIVELKDK--------------QDLKLQQSSQHSKNLTDIMDALEALGYSKSDIQKV 166 Query: 181 VSKIARPDASSETLIREALR 200 + D + I++AL+ Sbjct: 167 IKNF-NEDINVNEGIKQALQ 185 >UniRef50_B5EAH2 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Deltaproteobacteria RepID=RUVA_GEOBB Length = 199 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 116/201 (57%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + K P ++++V GVGY+VH+P + +Y LP G + H V+EDA L Sbjct: 1 MIALLTGKLAYKSPEFIILDVNGVGYQVHIPFSTYYTLPVEGGALSLQIHTSVKEDAINL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +QE+ LF+ LI +GVGPKLA ILS + +++ + L +PGIGKKT Sbjct: 61 YGFRTQQEKELFQLLIGVSGVGPKLATGILSNSEPSELADSLVNGNLARLSAIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+K++ K L A +PA + + ++AL+ LGYK + Sbjct: 121 AERLVLELKEKMKKLG------LAQPQAGGTTAPAKQEIRDDVLSALINLGYKEAVVQKA 174 Query: 181 VSKIA-RPDASSETLIREALR 200 ++++ DA+ E ++++AL+ Sbjct: 175 LAELKVTEDATVELVLKQALK 195 >UniRef50_C8QYM5 Holliday junction DNA helicase RuvA n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYM5_9DELT Length = 215 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 116/213 (54%), Gaps = 12/213 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + K P ++++VGGVGYEV +P + LP G+E ++ VVRED+ L Sbjct: 1 MIASLQGKLAHKGPDSLVLQVGGVGYEVFLPASRHDRLPAVGEELFLYIQTVVREDSFNL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +E+ +F+ L+ +GVGP+LA+ IL+ A+ ++ L KLPG+GKKT Sbjct: 61 YGFPDSREKRMFQLLLGVSGVGPRLAMNILAAAEPAALSRAIIAGDIVFLKKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA-------TDDAEQEAVAALVALGYK 173 AERL +E+ D+ + + + SP+ + + Q+A +AL+ LGY Sbjct: 121 AERLCLELGDKMEFFPTATTDAGTVVGPGAALSPSSAAAADFNEPSFQDAYSALLNLGYP 180 Query: 174 PQEASRMVSKIARP-----DASSETLIREALRA 201 +A + + + E L+R+ALR+ Sbjct: 181 ASQARAALEGLRSAADVSLELPVEELLRQALRS 213 >UniRef50_B2UKW6 Holliday junction DNA helicase RuvA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKW6_AKKM8 Length = 220 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 119/206 (57%), Gaps = 14/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI LRG + E P ++++V GVGYEV +P++ F L P G+E + T+ VRE+ Q+ Sbjct: 24 MIAFLRGTVAESYPQRLILDVHGVGYEVIVPLSTFDRLNPLPGRELTLKTYLHVRENMQV 83 Query: 60 LYGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 LYGF ER +F LI + +G+GP A+AIL +S +QF AV +V + + G+GK Sbjct: 84 LYGFATDAERDIFLLLIERVSGIGPATAIAILGSLSVEQFKQAVVGGDVSGIARAKGVGK 143 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTAER+++E+KD+ + A AT A +A AL+ALG+K E+ Sbjct: 144 KTAERIVLELKDKV----------GLAATWEAQAQGATSQAAGDAELALIALGFKQVESR 193 Query: 179 RMVSKIAR--PDASSETLIREALRAA 202 + ++ + PDA + LIR ALR+ Sbjct: 194 KAIAAHLKDHPDADVDELIRAALRSM 219 >UniRef50_C2FZN8 Crossover junction endodeoxyribonuclease n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZN8_9SPHI Length = 194 Score = 219 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 112/202 (55%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G ++ K P V+++V G+GY +H+ + F L + + +F F VRED+Q L Sbjct: 1 MYEYFNGKLVFKAPTHVVLDVNGIGYYIHISLNTFA-LIKDQENCKLFISFQVREDSQTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER LF+ LI +G+GP ILS ++ ++ +A+ +V + K+ GIG KT Sbjct: 60 FGFATEGERQLFEHLISVSGIGPNTGRMILSSITPEEIQSAIINGQVAVIQKIKGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E++D+ K D + P +EA++AL+ LG+ +A ++ Sbjct: 120 AQRLILELQDKLKKQGPDALISPVATKQSVP---------EEALSALIMLGFVKNQAEKV 170 Query: 181 VSKIA--RPDASSETLIREALR 200 ++ I PD S E LI+ AL+ Sbjct: 171 LNTIINTEPDLSVEQLIKLALK 192 >UniRef50_B7GYB6 Holliday junction ATP-dependent DNA helicase ruvA n=16 Tax=Acinetobacter RepID=RUVA_ACIB3 Length = 199 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 92/203 (45%), Positives = 134/203 (66%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + P VL+ V GVGYE+ P++ F +L + GQ+ ++TH VVREDAQ L Sbjct: 1 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQL-QKGQKVTLWTHLVVREDAQQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ QE+T+F+ L+K NGVGPK+AL ILS +S + V+ +E ++V LVK+PG+GKKT Sbjct: 60 YGFSDAQEKTIFRTLLKVNGVGPKMALGILSTLSVELLVHTIEHDDVNTLVKVPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++DRFK L + AA + ++ EA AAL +LGYKP EA + Sbjct: 120 AERLMIELRDRFKTLAQGTSSAAALPQI----QFVSNSPVAEAEAALQSLGYKPLEAQKA 175 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ + S +IR AL++ + Sbjct: 176 VAAVKADYTESADIIRAALKSMM 198 >UniRef50_A6DHC9 Holliday junction DNA helicase motor protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHC9_9BACT Length = 206 Score = 218 bits (557), Expect = 6e-56, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 6/206 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++E + +I+VGGVGY V +PM+ + LP+ G + H VREDA L Sbjct: 1 MIAHLKGQLVELELSNAVIDVGGVGYYVDIPMSTYDRLPKVGSPVALRIHMTVREDAMNL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER+ F+ + +G+GPK+ALA LS + + F A++ + L K+ G+GK+ Sbjct: 61 YGFATDEERSFFRMITSVSGIGPKIALAALSALPTETFCEAIQEGNIKLLSKISGVGKRM 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+ L + + V S +A +++ AL ALGY+P + Sbjct: 121 AERMVVELRDKVGAL--GMTSAFVAKVADDDMSAQDKEAFNDSIMALEALGYRPDTIRKT 178 Query: 181 VSKIAR----PDASSETLIREALRAA 202 V I SSE +I+ AL A Sbjct: 179 VKTIFDGLSPAQRSSENIIKAALSAM 204 >UniRef50_Q21HN5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Gammaproteobacteria RepID=RUVA_SACD2 Length = 207 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 97/208 (46%), Positives = 134/208 (64%), Gaps = 6/208 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL GI+ EK+ P +LI++GGVGY+V PMT FY LP G++A++ THF V E +Q L Sbjct: 1 MIGRLTGILAEKKAPHLLIDIGGVGYDVIAPMTTFYRLPALGEKAVLHTHFSVSETSQQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+++Q+R LF+ LIK NGVGPKLA+ I+S M + F V + ALVKLPG+GKKT Sbjct: 61 FGFSSQQDRELFRMLIKVNGVGPKLAVGIMS-MESSDFAKCVLDGNLTALVKLPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHG--DLFTPAADLVLTSPASPATDDAE--QEAVAALVALGYKPQE 176 AERL+V+M+DR K L +P + P + +A +AL+ LGYKP E Sbjct: 120 AERLLVDMRDRVKALDTTPSEHSPTGEGAGIVRVDPVINTNVIIADAESALIGLGYKPTE 179 Query: 177 ASRMVSKIARPDASS-ETLIREALRAAL 203 A++ VS ++ E LIR AL+ + Sbjct: 180 AAKAVSAAYNDTITTSEDLIRAALKGMI 207 >UniRef50_Q67Q98 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Clostridiales RepID=RUVA_SYMTH Length = 205 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ V+I+V GVGY +P + LP G ++T+ VREDA L Sbjct: 1 MIAHLRGELVTAGADWVVIDVAGVGYRCLVPASTRSRLPAQGAAVQLYTYLQVREDALTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E LF+ L++ +GVGPK+ALA+LS F AV E++ A+ ++PGIG+KT Sbjct: 61 YGFLTQAEYDLFELLLRVDGVGPKVALAVLSTTDPAAFRRAVAFEDLDAICRVPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP---QEA 177 A+RL++E+KD+ + L + A DA EA AL+ALGY A Sbjct: 121 AQRLVLELKDKIGAVPAGGGGVPDGLPV---AVAPAGDAWAEASEALIALGYSRGEAAAA 177 Query: 178 SRMVSKIARPDASSETLIREALR 200 V A S ETL+R AL+ Sbjct: 178 LARVRAEAGEAPSVETLVRLALK 200 >UniRef50_A0L4V9 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Proteobacteria RepID=RUVA_MAGSM Length = 204 Score = 216 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 118/203 (58%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G + K P V+++V GVGY V + + + ELP G+ +++T VREDA LL Sbjct: 1 MIAQLKGSLAAKHPDHVVMDVHGVGYRVFISLATYNELPTVGEACLLYTVTHVREDAFLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+++ +R +F L NG+G KLALA LS + + + A+ RE++ L +PG+GKKT Sbjct: 61 YGFHSESQRKVFNLLTSVNGIGTKLALAALSSHTPEALLTALSREDLTLLCTIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+ +E+KD+ L T A + + + +E +AL+ LGYKP + Sbjct: 121 AQRMAMELKDKLGALPMAAPTTA---IGAATMAANPAGLREEVASALLNLGYKPPQVDAA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++K+ ++ I AL+ AL Sbjct: 178 LAKLFSAGEITD--ISVALKGAL 198 >UniRef50_B6GE75 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GE75_9ACTN Length = 208 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 2/202 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L G + E P + +I+V GVG+E+ + T LP+ G + +++T VVRED+ L Sbjct: 1 MISQLHGTVAEATPSMAVIDVNGVGFELGISGTTAAGLPQVGGKVLLYTRMVVREDSCTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K ERT+F +L+ +GVG KLALAIL+ S Q V E+ + +PG+GKKT Sbjct: 61 FGFASKDERTMFDKLVAVSGVGAKLALAILTTFSVPQLYAVVMAEDDKGMATVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLV--LTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+RLI+E+K F + A + A P +A +A AAL+++G+ P E S Sbjct: 121 AQRLILELKGAFSKDRSLAGSAVAASIPLPLDVARPVAPNAMDDASAALLSMGFTPAEVS 180 Query: 179 RMVSKIARPDASSETLIREALR 200 +S D E L+ AL+ Sbjct: 181 LALSGYDGADMRVEDLLAAALK 202 >UniRef50_Q3A231 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfuromonadales RepID=RUVA_PELCD Length = 197 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 115/201 (57%), Gaps = 9/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G +IEK V+++VGGVGY + +P++ +Y LP+ G + H VREDA LL Sbjct: 1 MIALLNGQLIEKTVSQVILDVGGVGYRLLIPLSTYYALPDEGD-VRLRVHTHVREDALLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF L+ +GVGPK+AL ILS + A A+ + L +PGIGKKT Sbjct: 60 FGFLTETEKDLFGLLLSVSGVGPKVALNILSHLPAADLQQALSQGNAKHLATVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ + + D ++A++ALV LGYK + + Sbjct: 120 AERLVLELREKVGPVQAVPGNAPLP-------AETAGDLREDALSALVNLGYKENLSRKA 172 Query: 181 VSKIA-RPDASSETLIREALR 200 + I PDA E ++++AL+ Sbjct: 173 LDGIDTAPDAPLEDILKQALK 193 >UniRef50_C0EG91 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG91_9CLOT Length = 202 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 111/205 (54%), Gaps = 10/205 (4%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI ++G + P L +I+ GG+GYE+ MT +L + G +A ++T+ VRED Sbjct: 1 MIYSIQGELELLTPADNHFLAVIDCGGIGYEIRTTMTTASQLKQGG-KAKLYTYLNVRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A L+GF + +ER FK LI +GVGPK AL+ILS ++ QF V + +L + GI Sbjct: 60 AVELFGFFDTEERNCFKMLISVSGVGPKAALSILSNVTPSQFALCVASGDSKSLTRAKGI 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G K A+R+++E+KD+ + S A P+ EAV+ALV LGY + Sbjct: 120 GAKIAQRIVLELKDKIS----NEQLAGGVTDSGSVALPSGSGNTAEAVSALVVLGYNKTD 175 Query: 177 ASRMVSKIARPDASSETLIREALRA 201 A + +S D E LI+ L+A Sbjct: 176 AVQALSS-YPADTPVEELIKAGLKA 199 >UniRef50_Q2W2A3 Holliday junction ATP-dependent DNA helicase ruvA n=76 Tax=Alphaproteobacteria RepID=RUVA_MAGSA Length = 212 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 105/205 (51%), Gaps = 6/205 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G+I +++ GVGY V L E G A +F VREDA L Sbjct: 1 MIAKLKGLIDSLGDDWAVVDCNGVGYLVACSSKTLARL-ETGTAAALFVETQVREDAISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L GVG K+ALAILS S Q + + ++ L + G+G K Sbjct: 60 FGFLETGERDWFRLLTTVQGVGAKVALAILSVASPDQLLQIIAAQDKAGLTRANGVGPKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAA--DLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A R++ E+KD+ + F+P D + S PA ++AV+ALV LGYK EA Sbjct: 120 AVRILTELKDKAGKIALGGFSPGGIKDALSASAPLPAASGRMEDAVSALVNLGYKRLEAF 179 Query: 179 RMVSKIARP---DASSETLIREALR 200 + V + AR +A S LIR AL+ Sbjct: 180 QAVGETARELGDEADSSALIRAALK 204 >UniRef50_C0ZAN3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Bacillales RepID=RUVA_BREBN Length = 205 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 6/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + ++IE GG+GY + P + E G + +FTH VREDA LL Sbjct: 1 MIDFVEGTLSYLDSEYIVIETGGIGYRLFCPNPYQFVRYE-GNKTKLFTHHHVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LF++L+ +G+GPK LAIL+ + +Q V AV++E V L K PGIGKKT Sbjct: 60 YGFATRDERDLFRKLLDVSGIGPKGGLAILAAATPEQLVMAVQQENVTYLTKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE---A 177 A+R+I+++KD+ G A LT+ A EA+ AL ALGY E Sbjct: 120 AQRIILDLKDKLVGYTPSAILTVAAGDLTAGEQAV--SALNEALDALTALGYSDGELQKI 177 Query: 178 SRMVSKIARPDASSETLIREAL 199 +S+ ++ E LI++ L Sbjct: 178 RNTLSEKSKEGDGVEKLIKQGL 199 >UniRef50_C4Z030 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Clostridiales RepID=RUVA_EUBE2 Length = 207 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 118/202 (58%), Gaps = 2/202 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + E P ++++E G+GY +++P + ELP G E ++T+ V+ED L Sbjct: 1 MISYIKGELAEILPDVIVVEANGIGYNIYVPGSVPGELPSVGSEVKIYTYMNVKEDECSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + + ++FK LI NG+GPK AL LS ++A AV ++V A+ LPGIG KT Sbjct: 61 FGFLTRDDLSMFKMLICVNGIGPKAALGALSNITADDLRFAVLADDVAAIKALPGIGPKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPAS-PATDDAEQEAVAALVALGYKPQEASR 179 A+++I+E+KD+ K + + + ++ +AV ALV+LGY ++A Sbjct: 121 AQKIIIELKDKLKLDEVFESALSKNKKADNNSNVSNVMMIRNDAVEALVSLGYSSKDALV 180 Query: 180 MVSKIAR-PDASSETLIREALR 200 V ++ + SET+++EAL+ Sbjct: 181 AVKEVEDIENKDSETVLKEALK 202 >UniRef50_Q6MFA5 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Parachlamydiaceae RepID=RUVA_PARUW Length = 201 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 7/205 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G++ P +++V GVGY + +P +LP+ G+ +T +VVRE + L Sbjct: 1 MFAYIKGVLAFFNPSQAIVDVHGVGYLLFIPCRLLGQLPQIGEPVQFYTTYVVREFSHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + QER +F+ L+ G+GPK+AL+++ +S + AV R+++ L ++PG+GKKT Sbjct: 61 YGFLSYQERDIFEILMNVTGIGPKMALSLIGHLSMSELQIAVMRQDLSTLCRVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE+KD+ + + + + P S + Q+A+ AL+ LGY A + Sbjct: 121 AERLIVELKDKLAAIGHLDTSDHIEPLTQDPKSKSV----QDAMLALINLGYNQTTAQKA 176 Query: 181 VS---KIARPDASSETLIREALRAA 202 + K + LI AL+ Sbjct: 177 IKQGMKELPEEIDLAQLITVALKHV 201 >UniRef50_C6JAH0 Holliday junction DNA helicase RuvA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAH0_9FIRM Length = 202 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 2/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G+ ++ V++E GG+GYE++M E+ G++ V T+F VREDA L Sbjct: 1 MIAFVHGMAVDMTESSVVVEAGGIGYEIYMTGADLSEI-RMGEDVKVHTYFSVREDAMKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K + +FK L+ NGVGPK AL +L+G++A + A+ ++V L K PGIGKKT Sbjct: 60 YGFRAKDDLQMFKLLLGVNGVGPKAALGVLAGITADELRFAILSDDVKTLSKAPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++LI+E+KD+ K + + + D QEAV ALVALGY +A R Sbjct: 120 AQKLILELKDKMKLEDAFELKLVHEQERAAVGAGEVSDGRQEAVEALVALGYSSADALRA 179 Query: 181 VSKIARPD-ASSETLIREALR 200 V K+ E L++ AL+ Sbjct: 180 VRKVTDVSPDDVEGLLKAALK 200 >UniRef50_C4V2G2 Crossover junction endodeoxyribonuclease n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2G2_9FIRM Length = 199 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 6/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G L++V VGY V + + E +++ H VREDA LL Sbjct: 1 MIGFLKGKATHITSDYCLLDVHDVGYRVFISDQTRAHI-SPNAEVMLYIHTNVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF LI +G+GPK+A ILS + F V++++V + KLPGIGKKT Sbjct: 60 YGFFSREEYDLFLLLIGISGIGPKVAQGILSSATVNDFYCMVQQKDVKGITKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD+ + + + V + + EA AL+ LG++ E R+ Sbjct: 120 AERILLELKDKLSDVSVEDLPEGDNNV----GAEIENGMVAEATEALLTLGFQDSEIQRV 175 Query: 181 VSKIARPDASSETLIREAL 199 + ++E LIR AL Sbjct: 176 FRQ-KHSCQNTEELIRYAL 193 >UniRef50_Q0TP12 Holliday junction ATP-dependent DNA helicase ruvA n=36 Tax=Clostridium RepID=RUVA_CLOP1 Length = 201 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 110/200 (55%), Gaps = 3/200 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG V+IE+ +GY++ +P+ G+E +++ +VRED L Sbjct: 1 MYEYIRGQFQGISKDYVVIELNNIGYKIFTSGNTMSNMPKVGEEVLLYLEQIVREDFIGL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E +FK L+ NGVG K AL++LS + A+ + + + PGIGKKT Sbjct: 61 YGFTTREELEMFKLLLSINGVGAKAALSLLSISTVNNLKYAIMMGDEKHITRAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K +L + +L+ + E ++AL+ALGY +EA + Sbjct: 121 AQRIILELKDKLK--PDELTSEEGELIEGINDNSDYSFNINETLSALMALGYTEKEAQKA 178 Query: 181 VSKIARPDASSETLIREALR 200 + K+ + S E +I+E+L+ Sbjct: 179 LEKVDKT-LSIENMIKESLK 197 >UniRef50_C2KW74 Possible crossover junction endonuclease RuvA n=1 Tax=Oribacterium sinus F0268 RepID=C2KW74_9FIRM Length = 199 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 77/201 (38%), Positives = 123/201 (61%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ E + +++IE GG+GY V +P + F + P+ G+E ++ T+F VRED+Q L Sbjct: 1 MIRFIHGILREVKEDMLVIEAGGLGYGVRIPASVFDKAPKTGEEILLHTYFSVREDSQEL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++R F +L+ +G+GPK AL I S MS ++ ++A+ + + K PG+GKK+ Sbjct: 61 FGFWEERDRDFFIKLLSVSGIGPKTALGIFSCMSREELIHAIISNDSKKIQKAPGLGKKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE++D+ A + AT A +EAV ALV+LGY EA R Sbjct: 121 AERLIVELRDKVPKEDITFSGEEA------VETTATSVAVEEAVEALVSLGYSVMEAKRW 174 Query: 181 VSKI-ARPDASSETLIREALR 200 + I A + ++E L+R +L+ Sbjct: 175 IRSIPAYEEKTAEELLRISLK 195 >UniRef50_A6NV14 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NV14_9BACE Length = 201 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G ++ P L +++ GGVGY L G+ A ++TH VREDA L Sbjct: 1 MFYYVKGPVVHMAPYLAVVDCGGVGYACRTTNNTLARL-RKGETATLYTHLNVREDAMEL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E + F+ LI +GVGPK AL+ILS S + ++ + AL PGIGKK Sbjct: 60 YGFASENELSCFQLLISVSGVGPKAALSILSSTSPEGLATSIITGDEKALTVAPGIGKKI 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ G L TP + + + + EA AAL LGY EA+ Sbjct: 120 AQRIILELKDKLAK--GQLSTPGGESYGGTGVTVIPQNKASEAAAALAVLGYSQAEAAAA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 + I + E +I++AL+ + Sbjct: 178 LKNIDMETLALEEIIKQALKKMV 200 >UniRef50_C1SHM7 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHM7_9BACT Length = 192 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 12/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGI+IEK P +I+ G V +E+ + + + +LPE GQ+A V+THFV+RED L Sbjct: 1 MIYSVRGILIEKNPANAVIDTGAVAFEMSISASTYQQLPETGQKAHVYTHFVMREDGVYL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E+ LF LI + VGPKLALAILSGM +F+NAV E+G + +PGIGKKT Sbjct: 61 YGFSKMEEKKLFLLLITISKVGPKLALAILSGMDVNKFMNAVMNSEIGLISTIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+F + S ++ V+AL+ LGY + + Sbjct: 121 AERIVVELRDKFGSMS------------VSTGDEPVAGGAEDVVSALLNLGYSRADCQKA 168 Query: 181 VSKIARPDASSETLIREALR 200 V+KI + D+ E L + AL+ Sbjct: 169 VNKIYKTDSGFEELFKGALK 188 >UniRef50_UPI0001C37714 Holliday junction DNA helicase RuvA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37714 Length = 206 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 74/200 (37%), Positives = 115/200 (57%), Gaps = 2/200 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + K+ +IE GGVGY L E G EA+++TH VREDA L Sbjct: 1 MIYSLKGKLTVKELGFAVIECGGVGYGCKTSYNTIASLGEVGSEAMLYTHLYVREDAVEL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +QE + F+ LI +GVGPK A++ILS ++ ++F V + + + GIG KT Sbjct: 61 FGFATQQELSCFRLLISVSGVGPKAAISILSDVTPEKFAFLVASGDSKSFTRTKGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ + + D +P+S A D+ EA+ AL+ LGY E + + Sbjct: 121 AQRIVLELKDK-ISSESISGSVSGDAAAFAPSSAAPSDSVSEALEALMVLGYTQGETAPI 179 Query: 181 VSKIARPDASSETLIREALR 200 + K+ P S++ LI+E LR Sbjct: 180 LGKL-DPSMSTQDLIKETLR 198 >UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NVI5_9DELT Length = 212 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 9/210 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + +K +++EVGGVGYEV P LP G+E ++ VVRED+ L Sbjct: 1 MIATLRGQLTQKGADSLIVEVGGVGYEVFFPAGRQDRLPPRGEELFLYIQTVVREDSFCL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ F L+ +GVGP+LA+ IL+ + A+ +++ L KLPG+GKKT Sbjct: 61 YGFVDAAEKQFFLLLLGVSGVGPRLAMNILAAAAPDVLGRAIATDDIAGLKKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGD--LFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 AERL +E+KD+ L P A Q+A +AL+ LGY P A Sbjct: 121 AERLCLELKDKVDFFPAAKPLARPDQAPPAEQGADFGAQPVFQDAYSALLNLGYPPVRAR 180 Query: 179 RMVSKIARP-------DASSETLIREALRA 201 + ++ R + L+R LR+ Sbjct: 181 SALEEVRRQLEQEPAGELPLPELLRITLRS 210 >UniRef50_C0ES21 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES21_9FIRM Length = 230 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 115/203 (56%), Gaps = 4/203 (1%) Query: 2 IGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY 61 I ++G + K V+IE G+GY++ +P + +G+EA++ T+ VRED L+ Sbjct: 28 ISYIKGTVAYKGKDSVVIENHGIGYQIKVPSRVLEGV-NSGEEAMLHTYLYVREDQLALF 86 Query: 62 GFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTA 121 GF++ QE F+ L+ +G+GPK AL++LS MS + AV E+ ++ K PGIG K A Sbjct: 87 GFSSIQELETFQILLGISGIGPKAALSVLSTMSVEDLYYAVFSEDAKSIAKTPGIGPKGA 146 Query: 122 ERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMV 181 +R+I+E+KD+ + + A + S S D+ + V ALVALGY EA R V Sbjct: 147 KRMIIELKDKLNLEALESVSGAEEAAPQS--SFTEGDSIADTVQALVALGYSNGEAYRAV 204 Query: 182 SKIARPD-ASSETLIREALRAAL 203 + + +E L++EAL+ L Sbjct: 205 HSVPEAEKLDAEQLLKEALKKVL 227 >UniRef50_A8SPH1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SPH1_9FIRM Length = 208 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 5/208 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + + +++E GG+GY + + LP VFT+ VRED L Sbjct: 1 MISYITGTLEYQSGNSIVVECGGIGYSMMISGQFMNRLPAMHSHIKVFTYMSVREDEISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E +FK L+ NGVGPK A++ILS ++ + AV E+V A+ + GIG K Sbjct: 61 YGFYDRDELEVFKVLLSVNGVGPKAAMSILSALTVNELRLAVVSEDVKAITRANGIGTKG 120 Query: 121 AERLIVEMKDR--FKGLHGDLFTPAADLVLTSPASPATDDA--EQEAVAALVALGYKPQE 176 A R+I+E+KD+ + + + A + A D VAAL ALGY E Sbjct: 121 ASRIILELKDKLRLEDMIDAAYEDAMNGSRVGSGGVAQSDIDTRANVVAALTALGYSGVE 180 Query: 177 ASRMVSKIAR-PDASSETLIREALRAAL 203 A R V+++ D E L++ +L+ + Sbjct: 181 AGRAVNRVEGWQDMDEEQLLKASLKNII 208 >UniRef50_Q2S5C8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Rhodothermaceae RepID=RUVA_SALRD Length = 202 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G +++K L++V G+GY VH+P + + LP+ +E + T+ +RED + L Sbjct: 1 MIDYVSGTLVDKTTDSALVDVNGLGYRVHVPTSTYKRLPDTDEEVTLHTYHYLREDDESL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ERT+F+ + + VGPKLAL+ LS M+ + + V + L ++ G+G KT Sbjct: 61 YGFATKAERTVFETMTGVSRVGPKLALSALSAMTPTELRDHVMEGDKSRLTQISGVGTKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE++DR L D S S A +A +A+ AL LG +A R Sbjct: 121 ADRLIVELRDRLADLD-----VLEDTSPLSGGSDARAEARADALEALTELGLSKADAERS 175 Query: 181 VSKIARPDA---SSETLIREALRA 201 + ++ R +A S++ L+R AL+A Sbjct: 176 IRQVLRDNAGIQSADELVRRALKA 199 >UniRef50_C7N4C8 Holliday junction DNA helicase, RuvA subunit n=4 Tax=Coriobacteriaceae RepID=C7N4C8_SLAHD Length = 197 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 71/200 (35%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + IEV GVG+ V MP + +LPE G+E +V T+ VREDA L Sbjct: 1 MIAFLNGRVAGHTTDTAFIEVNGVGFAVGMPASDLAKLPERGEEVLVHTYLAVREDAMAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ F++LI +GVGPK+ALA LS ++ NA+ +V A+ +PG+GKKT Sbjct: 61 YGFLTQDEKRFFEKLIGVSGVGPKVALAALSVYKPEELANAIAAGDVKAVSMIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+K F+ L + + A AL+++G+ EA Sbjct: 121 AQRMILELKG--------SFSDENMQSLFDQETAEATRRLEGAREALLSMGFSSAEADLA 172 Query: 181 VSKIARPDASSETLIREALR 200 + + LI+ ALR Sbjct: 173 LKDAPEELHTDSALIQYALR 192 >UniRef50_B0K955 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Thermoanaerobacteraceae RepID=RUVA_THEP3 Length = 187 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 17/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGII + V+I+ G+G +V +P + LP G ++T+ VRED + Sbjct: 1 MIEYVRGIIEDIGQDYVVIDFMGIGIKVFVPFSTLKVLPSKGNITKLYTYLQVREDGFQI 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E LF++L+ +GVGPK AL+ILS +S FV AV + AL PGIGKKT Sbjct: 61 FGFKTKEELDLFEKLLSVSGVGPKGALSILSVVSIDNFVKAVNAGDYKALTVAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ ++ EA+ AL+ALGY EA Sbjct: 121 AERIILELKDKLPK---------------EIVFEGDNNFSNEALEALLALGYTKSEAIYA 165 Query: 181 VSKIARPDASSETLIREALR 200 ++ I S E +++AL+ Sbjct: 166 LADI--TCDSVEDAVKQALK 183 >UniRef50_B5JGR2 Holliday junction DNA helicase RuvA n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGR2_9BACT Length = 205 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 121/204 (59%), Gaps = 5/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ P +I GG+GY VH+P++ +LP G+ + TH V RED+Q L Sbjct: 1 MIVSIEGILERATPLTAIINAGGLGYLVHIPVSTAAKLPANGETVKLHTHAVYREDSQSL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF ++ ER F+ LI K +GVGPK+A+ ++S + ++A+ + L K PGIGKK Sbjct: 61 YGFASEDERNFFQLLIEKVSGVGPKVAIGMMSKLELPSLISAIGNADAVLLAKTPGIGKK 120 Query: 120 TAERLIVEMKDRFKGL-HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 TAER+++E+KD+ H P LV + A+ E +A+ AL+ALGYK +A+ Sbjct: 121 TAERVVIELKDKLGAFAHTSSANPLQGLVPGNTAAAGKVSHEDDAILALLALGYKQSDAA 180 Query: 179 RMVSK---IARPDASSETLIREAL 199 + V K P+AS+E LI+ AL Sbjct: 181 KSVGKAVEALGPNASTEALIKAAL 204 >UniRef50_C8WQH8 Holliday junction DNA helicase RuvA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQH8_ALIAD Length = 208 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 80/199 (40%), Positives = 112/199 (56%), Gaps = 7/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + P V ++V VGY VH+ L G A ++TH VRED L Sbjct: 1 MIAFLRGRVAFLGPGYVDLDVRDVGYRVHVCDRTQAAL-NLGDTAFLYTHHHVREDGWAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER LF+ L+ +G+GPKLAL ++ + V A+ E+ +L +LPGIG+K Sbjct: 60 YGFETIEERALFERLVAVSGIGPKLALQVIGAAGVGEIVAAILAEDAESLSRLPGIGRKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL+VE++++ L A L +PAS A ++AV+ALVALGY+P+EA Sbjct: 120 ASRLVVELREKLDDLA------PAALRAPAPASSPQGSAAEDAVSALVALGYRPREAEEA 173 Query: 181 VSKIARPDASSETLIREAL 199 VS + R S E I+ AL Sbjct: 174 VSAVGRGRQSVEDTIKAAL 192 >UniRef50_Q11Z44 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Bacteroidetes RepID=RUVA_CYTH3 Length = 199 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 9/205 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + K P V+++V G+GY + + + F +L + + + T ++EDA L Sbjct: 1 MIAYIEGKLAHKDPTFVVVDVQGIGYHIRVSLHTFSQLKDL-ERVKIHTFLHIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F L +G+GP AL +LS M+ + A+ RE+V + + GIG KT Sbjct: 60 FGFADLMEKEMFLHLTSISGIGPGTALVVLSSMNPIELKEAIAREDVKTIQSVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K A S + + EA+ AL+ LG+ A + Sbjct: 120 AQRVILELKDKMKK-----DALLAGSDSKQNFSVSHNSIRSEALTALITLGFTKTVAEKN 174 Query: 181 VSKIARPDASS---ETLIREALRAA 202 + I + +++S E LI++AL+ + Sbjct: 175 LDLILKGNSNSFTLEDLIKQALKMS 199 >UniRef50_Q183P4 Holliday junction DNA helicase n=7 Tax=Clostridium RepID=Q183P4_CLOD6 Length = 203 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 8/199 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + E +++E G+GY++++ L + G+ ++T +VRED L Sbjct: 4 MYSYIKGTVEEIYIDSIVVENNGIGYKINVSSNTIMNL-QVGEATKIYTKLIVREDDMSL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF +++E +F+ L + +GPK+AL+ILS S Q + E++G L K PG+GKKT Sbjct: 63 CGFVSREELKMFELLTSVSKIGPKVALSILSFASPAQLGAYILSEDIGKLSKAPGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD+ + + T + E+V ALVALGY E+ Sbjct: 123 AERIVLELKDKVDKNNIEFEPTLLSQKPTLISQ-------DESVDALVALGYTLSESKEA 175 Query: 181 VSKIARPDASSETLIREAL 199 V K + ++E +I++AL Sbjct: 176 VQKCKKDGMNTEAIIKKAL 194 >UniRef50_B3QVA9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RUVA_CHLT3 Length = 200 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 109/204 (53%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ L G +IEK +++EV GVGY +++ T +LP G + + T+ VREDA L Sbjct: 1 MLSYLSGTLIEKFSTEIVVEVNGVGYLLNISATTHEKLPAIGNQIKILTYLYVREDALQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++R +FK LI +GVGPKLA ILSGMS Q +V + AL + G+GKKT Sbjct: 61 YGFITTEDREVFKLLIAISGVGPKLAQTILSGMSTAQLRESVIAGDTKALTAIAGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ L + +A +AL++LG+ A + Sbjct: 121 AERIILELKDKLVKLDLKIDIKETAFRSD------KQQVRNDAYSALISLGFTKSIAEKA 174 Query: 181 VSKIAR--PDASSETLIREALRAA 202 + PD S + LIR ALR Sbjct: 175 MRAAIAEVPDGSVDDLIRVALRHV 198 >UniRef50_Q0W1R7 Holliday junction resolvasome, DNA-binding subunit n=2 Tax=Euryarchaeota RepID=Q0W1R7_UNCMA Length = 201 Score = 209 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 15/208 (7%) Query: 1 MIGRLRGIIIEKQPPL--VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE-DA 57 MI + G I K V+IE GG+GYEVH+P +LP+ G++ ++ H RE D Sbjct: 1 MIAHIEGKIDAKSESEEVVVIEAGGIGYEVHVPTPVLDQLPQEGEDCKLYIHTNFREEDG 60 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 LYGF Q+R F+ L+ +G+GPK+ L I+SG + ++ A+ E++ L ++ G+G Sbjct: 61 TTLYGFATIQDRDFFRLLLTVSGIGPKVGLGIMSGATVEEIAEAIVTEDLKTLTRMNGVG 120 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KKTA+RL++E+KD+ L ++ + D A +AV ALVALGY Q A Sbjct: 121 KKTAQRLVLELKDKVAKLR---------IMHHAKKQVKGDTASADAVDALVALGYSRQVA 171 Query: 178 SRMVSKIARPDAS---SETLIREALRAA 202 S V++ + L+ +LR A Sbjct: 172 SDAVARARDNFTAPPLVNELVVASLRYA 199 >UniRef50_Q6GG62 Holliday junction ATP-dependent DNA helicase ruvA n=53 Tax=Staphylococcus aureus RepID=RUVA_STAAR Length = 200 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 69/204 (33%), Positives = 113/204 (55%), Gaps = 6/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + P V++E GVGYE+ P + ++ E ++ T +VREDAQLL Sbjct: 1 MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQ-KHLDHEVLIHTSLIVREDAQLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++E+ +F LIK G+GPK ALAIL+ + + A+E E L K PGIGKKT Sbjct: 60 YGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + K D + L+ S D QEA+ AL ALGY +E +++ Sbjct: 120 ARQIVLDLKGKVKITEED----SDSLLQVDATSTEQDQFVQEAMLALEALGYSKRELAKV 175 Query: 181 VSKIARPD-ASSETLIREALRAAL 203 + + S + ++ L+ + Sbjct: 176 EKTLNKNKYDSVDEAVKAGLQLVV 199 >UniRef50_Q3ATE5 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Chlorobiaceae RepID=RUVA_CHLCH Length = 204 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M RG +I +IE+ GV Y + T +LP +G E +F H VREDA LL Sbjct: 1 MYAYFRGTLISFTADEAIIELQGVAYHFLISATTSRQLPNSGSEVQLFAHLYVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ER LF+ L++ +GVGPKLAL++LSG+ + +A+ L + G+GKKT Sbjct: 61 YGFYSEEERQLFRLLLQASGVGPKLALSVLSGLPVHEVHDAIVSNIPERLYGISGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E++D+ L +P A +A+ ALV LG+ A + Sbjct: 121 AARIILELRDKILKL-----SPVLPTATARRPHNAAQQLRDDAITALVTLGFPRAAAQKT 175 Query: 181 VSKIARPDA--SSETLIREAL 199 V+ + ++ + E +++ AL Sbjct: 176 VTSLLDENSNCTVEEVVKSAL 196 >UniRef50_Q5I6C8 Holliday junction DNA helicase RuvA n=17 Tax=Bacteroidetes RepID=Q5I6C8_FLAJ1 Length = 193 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 120/203 (59%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++EK P V+I+ GGVGY V++ + F +P A ++TH ++EDA L Sbjct: 1 MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNA-DFIKLYTHLQIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ER +F+ L+ +G+G +A +LS + +Q +NA+ +VG + + GIG KT Sbjct: 60 YGFVEKSEREIFRMLLSVSGIGAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+++K++ L+ L + + EA++AL LG+ + + ++ Sbjct: 120 AQRVILDLKEKVLKLYD----------LDEVSVVQNNTNRDEALSALEVLGFVRKTSEKV 169 Query: 181 VSKIARPD--ASSETLIREALRA 201 V KI + D A+ ET+I++AL++ Sbjct: 170 VEKIVKEDPEATVETIIKKALKS 192 >UniRef50_C1F8Z2 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Acidobacteria RepID=RUVA_ACIC5 Length = 198 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 13/204 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ KQP ++E GVGY+V + + F LP G E + H V EDA L Sbjct: 1 MIAHLRGTLLSKQPGQAIVECAGVGYDVAISVPTFTALPAEGAEVRLHIHTQVSEDAIAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++E+ LF+ LI +GVGPKLA+ +LSG+S ++ V A+ ++ +L ++PG+GKK Sbjct: 61 FGFLDREEKRLFERLITVSGVGPKLAIKMLSGLSPERTVAALRAQDHASLTRIPGVGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VE+KD+ L A ++ ++AL+ LGY+ A + Sbjct: 121 AERLVVELKDKLDDLIAAAPAAGPVAAGP---------AAEDVLSALLNLGYQRPAALKA 171 Query: 181 VSKIARPDA----SSETLIREALR 200 + DA + L R AL+ Sbjct: 172 IETAVEKDAAAGEDFDLLFRAALK 195 >UniRef50_D0J979 Holliday junction DNA helicase motor protein n=2 Tax=Blattabacterium RepID=D0J979_BLASP Length = 202 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 119/203 (58%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI LRG +IEK ++I+ GVGY +H+ + L E G+E ++T+ ++E+ + Sbjct: 1 MITHLRGKLIEKNQSSLIIDCNGVGYYLHISSYTYSSLLEEEGKEISIYTYLFIKENQHV 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F LI NG+GP A+ ILS ++ + ++ RE++ ++ GIGKK Sbjct: 61 LYGFFERIERKIFSHLISVNGIGPSSAITILSSLTPHEIKESISREDIEVFNQVKGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+R+I+E+KD+ + ++ ++EA++AL+ LG+ P+E+ + Sbjct: 121 TAQRIIIELKDKISISPSTIPKKGKNVNFFDKPPIF---IKKEALSALIVLGFSPKESKK 177 Query: 180 MVSKIA--RPDASSETLIREALR 200 ++ +I P+ + E LI+E+L+ Sbjct: 178 VLEEILDKNPEFTVENLIKESLK 200 >UniRef50_A4QEN4 Holliday junction ATP-dependent DNA helicase ruvA n=17 Tax=Actinomycetales RepID=RUVA_CORGB Length = 206 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +I +IE GVGYEV +L G+EA+V T VVREDA L Sbjct: 1 MIASLRGTVINIGLSSAVIECNGVGYEVVTTPNTLSQLVR-GEEALVLTTMVVREDAMKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + R +F L +G+GP+LALA S +S + A+ + AL ++PG+GK+ Sbjct: 60 YGFIDNESREMFSVLQTVSGLGPRLALACESVLSPLEISQAITNADAKALQRVPGVGKRM 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+K + + A + + A+ A++ ++ ALV LG+ +++ Sbjct: 120 ADRLIVELKGKVAAFAAGVVDEAGEQISLPNANIASEVVVEQVSQALVGLGFSEKQSDDA 179 Query: 181 VSKIARPDASSETLIREALRAAL 203 VS + D S +T ALRAAL Sbjct: 180 VSFVLAADPSLDT--SGALRAAL 200 >UniRef50_A7I4H5 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I4H5_METB6 Length = 201 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 109/202 (53%), Gaps = 11/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G V+++V G+GY VH+P E+ AG + + T+ VREDA L Sbjct: 1 MIAYLEGTPAATGDRWVVLDVNGIGYRVHVPEPEVREIAGAGTKVKLHTYMAVREDAITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E LF +I +G+GP++AL ILS +S + FV A+ + +L ++ GIG K Sbjct: 61 YGFLHESELELFTVIIGVSGIGPQIALNILSQISLEDFVLAILSGDEKSLTRISGIGPKG 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E++D+ K + + A D ++A +ALV+LG+ + Sbjct: 121 AKRLILELRDKMKKVQDAMTHTPAGR---------QDATLRDAASALVSLGFAEAASYDA 171 Query: 181 VSKIAR--PDASSETLIREALR 200 V+ AR + + +++ ALR Sbjct: 172 VASAARGLAAPTVQEIVKAALR 193 >UniRef50_Q2LRA9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Syntrophus aciditrophicus SB RepID=RUVA_SYNAS Length = 204 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 126/203 (62%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++RG +I K +V+I+ G+GYEV +P++ +YELP+ G E +F + ++D+ LL Sbjct: 1 MIAQIRGKLILKTVSMVIIDNHGIGYEVMIPLSTYYELPDVGSEVSLFVYTFFKQDSILL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF + E+ LFK +I +G+GP+LA+ +LSG+++ + ++A+ ++ L+K+PG+G+K Sbjct: 61 VGFCTENEKQLFKLMISVSGIGPRLAVNVLSGINSSELIHAIANNDLNRLLKVPGLGRKM 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++D+ G + + E++A++AL+ LGYK Q A Sbjct: 121 AQRVILELRDKVSGWTSKEQITFINNKKDAIDQSVM---EEDAISALINLGYKSQAAKDA 177 Query: 181 VSKIAR---PDASSETLIREALR 200 + ++ + S + ++++AL+ Sbjct: 178 IDRVISEGGENKSLDVILKKALK 200 >UniRef50_C6P9B0 Holliday junction DNA helicase RuvA n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9B0_CLOTS Length = 188 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 113/200 (56%), Gaps = 16/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I+E+ V++E G+G+++ +P + ELP ++T+ V+ED Sbjct: 1 MIDYIKGAIVERGIDYVVVETLGIGFKIIVPTSTLRELPNTNDIIKLYTYLHVKEDGFQF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E +FK+LI NGVGPK A++ILS +S F NA++ + + K PGIGKKT Sbjct: 61 YGFLTINEMEIFKKLIAVNGVGPKAAVSILSTISIDNFYNAIKNGDSKIIEKSPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ + + + DDA ++ + AL++LGY QE+ Sbjct: 121 AQRIILELKDKL--------------FINNAEAVKIDDASEDVLNALLSLGYTRQESISA 166 Query: 181 VSKIARPDASSETLIREALR 200 + I + +E +REAL+ Sbjct: 167 LYGIDCTN--TENALREALK 184 >UniRef50_C4GBB6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBB6_9FIRM Length = 199 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + E P ++++ G+GYE+ +P + ++ Q V+T+ VR+D L Sbjct: 1 MFSYIQGRVEEINPEGIVLDHDGIGYEIGLPQSSLSQIRRQMQ-LRVYTYLQVRDDGFSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++ LFK LI G+GPK AL+IL +S Q A+ + + + PGIGKKT Sbjct: 60 FGFLKREDLDLFKLLIGVGGIGPKGALSILGVLSVDQLRFAIAAGDDKTIAQAPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I++++D+ D + + + ++DD EA+ AL ALGY EA + Sbjct: 120 AQRVILDLRDKI-----DFTQTLEAQLDSKASDRSSDDIRGEAILALNALGYSSAEALQA 174 Query: 181 VSKIARPDASSETLIREALR 200 + + S E LIR L+ Sbjct: 175 IRDLDISSMSVEDLIRAGLK 194 >UniRef50_A6TQM4 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Alkaliphilus RepID=RUVA_ALKMQ Length = 194 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 10/199 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G+I+E Q +++EV G+GY ++ + ++ + GQ + +FTHFV+RED L Sbjct: 1 MFEYMKGMIVEAQIDKIIVEVNGIGYRINSSINSASQV-KIGQVSTLFTHFVLREDEAHL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K+E +FK+LI + +GPK+A ILS + Q+ + + A+ K PG+GKKT Sbjct: 60 YGFVDKEELAMFKKLISVSKIGPKVAAGILSTYTPQRLGAYIVSNDAQAIAKSPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ + + + E V AL+ALGY E + Sbjct: 120 AERMILELKDKIDD---------SQVEYDQNFFNHENKNNNEVVDALMALGYTKHEGEQA 170 Query: 181 VSKIARPDASSETLIREAL 199 S + S+E +IR+AL Sbjct: 171 ASAVRDTSLSTEEMIRKAL 189 >UniRef50_B1I477 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=RUVA_DESAP Length = 202 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 118/202 (58%), Gaps = 3/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++ P V++EVGG+GY V +P + LPE G+ ++T+ V+E A + Sbjct: 1 MIDFLKGRLVSVYPEAVVVEVGGIGYRVQVPPSLAASLPEPGETVFLYTYLSVKETALEM 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+++ +RT F L+ G+GP+ ALA++ + ++ A+ RE+ G L +PGIG K+ Sbjct: 61 FGFSSELDRTAFLLLLGVAGIGPRTALAVVGRLGTRRLWAAILREDTGILTTVPGIGVKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE++DR + +A+L + AE EA+AAL++LGY P+EA Sbjct: 121 ARRIMVELRDRLEKQQ---VAVSAELPASDGVPVLAGRAENEALAALISLGYTPREAREA 177 Query: 181 VSKIARPDASSETLIREALRAA 202 ++++ + L+ ALR Sbjct: 178 LNRLPDRKLDAAGLVHAALRIM 199 >UniRef50_A1UR85 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Rhizobiales RepID=RUVA_BARBK Length = 217 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 10/210 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L GI+ ++++V GVGY V + LPE GQ +F VREDA L Sbjct: 1 MIGKLTGILDSVFEDHIILDVQGVGYVVFLSNRLLSSLPERGQAVSLFIETHVREDAIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E+ F L GVG K+ALAILS + Q A+ ++ + + PG+GK Sbjct: 61 FGFETKVEQDWFCLLQNVRGVGAKVALAILSTLPPPQLAQAITLSDIAMISRSPGVGKMV 120 Query: 121 AERLIVEMKDRFKGLHG------DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 +ER+I E+K++ + + +++ + +A+AAL LG++ Sbjct: 121 SERIINELKNKALPSNAPHQSMPHFVSYSSETSSQAGTQHTGHQHSMDALAALTKLGFER 180 Query: 175 QEASRMVSKIAR----PDASSETLIREALR 200 +A+ + + + SS LIR +L+ Sbjct: 181 DQATHALQEAIKAFEGETPSSALLIRHSLK 210 >UniRef50_B5IKU6 Holliday junction DNA helicase RuvA n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IKU6_9CHRO Length = 214 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 9/208 (4%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G I + +L+ GVGYEV + + LP G + H +RED Sbjct: 1 MIGWLQGDIADPWQHDKRCGLLLLCRGVGYEVQVSQRDWRRLPPPGSPLALHIHQSIRED 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A LYGF +QER LF++L+ +GVGP++A+ +L + ++ V A+ + ++ L + PG+ Sbjct: 61 AWTLYGFTARQERDLFRDLVAVSGVGPQMAMGLLGALEMEELVQAIVQPDLRRLCQAPGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL VE++ R + + AA+ A D + + LV+LG+ E Sbjct: 121 GKRTAERLAVELRVRLQERYLGAVETAAEADPEQLPGLA-DGSRDDICGTLVSLGFADLE 179 Query: 177 ASRMVSKIARP----DASSETLIREALR 200 R + +A +AS+E IR+ LR Sbjct: 180 IHRALRAVASQGLTAEASTEDWIRDCLR 207 >UniRef50_C7M5Z6 Holliday junction DNA helicase RuvA n=2 Tax=Capnocytophaga RepID=C7M5Z6_CAPOD Length = 194 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G ++EK V+I+ GVGY V++ + + LPE G+ ++T+ ++EDA L Sbjct: 1 MITQLQGKLVEKNSTHVVIDCHGVGYFVNISLNTYSALPE-GEAIKLYTYLQIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ER +F L+ +GVG A +LS ++A Q NA+ +V + + GIG KT Sbjct: 60 YGFLTKAEREVFVLLLSVSGVGASTARTMLSALTAAQVRNAIINGDVATIQAVKGIGAKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++++KD+ L P A ++EA+AAL LG+ ++A ++ Sbjct: 120 AQRVVLDLKDKMLKLQDFEEVPM----------NAVSTHKEEALAALEVLGFMRKQAEKV 169 Query: 181 VS---KIARPDASSETLIREALR 200 V K + + S E +I++AL+ Sbjct: 170 VDIIIKSSSEELSVEEIIKQALK 192 >UniRef50_Q2RVF6 Holliday junction ATP-dependent DNA helicase ruvA n=27 Tax=Alphaproteobacteria RepID=RUVA_RHORT Length = 212 Score = 205 bits (522), Expect = 8e-52, Method: Composition-based stats. Identities = 75/205 (36%), Positives = 102/205 (49%), Gaps = 5/205 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G++ +I+VGGVGY V P LP GQ + VRED L Sbjct: 1 MIAKLKGLVDSVAEDHAVIDVGGVGYLVFCPARVLTRLPSPGQAVALVVETQVREDHISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L GVG K+AL++LS +SA Q A+ + AL + PG+G K Sbjct: 61 FGFLETAERDWFRLLSTVQGVGSKVALSVLSVLSAGQISQAIAAGDKAALGRAPGVGPKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTP----AADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 A R+ E+KD+ L G P D P T D +AV+ALV LGY E Sbjct: 121 AARIASELKDKAVALGGMPAPPPRGAGTDAAGEGPPGGPTGDVLGDAVSALVNLGYGRSE 180 Query: 177 ASRMVSKIARPDASS-ETLIREALR 200 A S+ A A++ + +I ALR Sbjct: 181 AVGAASRAAGLGATTVQGVIGLALR 205 >UniRef50_B1ZN17 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Opitutus terrae PB90-1 RepID=RUVA_OPITP Length = 200 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 78/203 (38%), Positives = 118/203 (58%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ P ++EV G GYEVH+P+T LP AG + T + RED+Q L Sbjct: 1 MITSIQGTLVSATPLQAIVEVAGFGYEVHIPVTTAERLPAAGAAVKLHTLVIYREDSQTL 60 Query: 61 YGFNNKQERTLFKELIK-TNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF + ER F+ +I+ GVGPK+AL+I+S ++ +A+ +V +L K PGIGKK Sbjct: 61 YGFASPAERDFFRLMIEHVTGVGPKMALSIMSRLALPSLESAIRMGDVASLAKCPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERL+VE++ + G + A+ A ++AVAALVALGY+ +A Sbjct: 121 TAERLVVELRTKV----GATGAAPGLATQPAAAASPGASAHRDAVAALVALGYRSADADE 176 Query: 180 MVSK---IARPDASSETLIREAL 199 V + A++E+LI++AL Sbjct: 177 AVRRASLALGEAATTESLIKKAL 199 >UniRef50_A5WFC8 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Moraxellaceae RepID=RUVA_PSYWF Length = 210 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 1 MIGRLRGIIIEKQ-PPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG + G + P L+ GVGYEV +P+ F +L + A ++TH VREDAQL Sbjct: 1 MIGLIEGRVCHLSAPVACLMTASGVGYEVELPLPDFCQL-QLEAMASLWTHLHVREDAQL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F++LI+ NGVG K+ALA++S SA + + ++ E AL ++PGIGKK Sbjct: 60 LYGFLHPTERDVFRQLIRVNGVGAKMALAMMSTFSATELKHCIDTENDAALTRVPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+RL++E+K +F + D+ A+ + E +AL++LGY+ +EA + Sbjct: 120 TAQRLLIELKGKFDHIQSDMSLLTEVEQQIGIAANSEGVILAEVESALISLGYRDKEAQQ 179 Query: 180 MVSKIARPDA-----SSETLIREALR 200 + DA +++L++ L+ Sbjct: 180 AIKAARETDAGQQLVDTQSLLKLTLK 205 >UniRef50_C4XIJ9 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Desulfovibrionales RepID=RUVA_DESMR Length = 202 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G ++ ++ ++ GGVGYE+ +P LP G + +F H VVREDA Sbjct: 1 MIGYLEGRVVARRDRFAIVLTPGGVGYELELPTPVAAALPAPGGQVSLFVHTVVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + +R F+ LI + +GP+ ALAILS +A + V + ALV++PGIGKK Sbjct: 61 LFGFASLDDRETFRTLIGISKLGPRTALAILSHFTADDLLRVVASGDAEALVRVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A+R+ +E+ + +G A +P+ P + VA L LGY EA + Sbjct: 121 SAQRIFIELSYKLEG--------RAPAAGLAPSVPIPGGVAGDVVAGLTNLGYPEPEARQ 172 Query: 180 MVSKIA--RPDASSETLIREALR 200 + +++ PD +R+AL+ Sbjct: 173 VAAEVLEAEPDLDVAAALRQALK 195 >UniRef50_B8CXG3 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Halothermothrix orenii H 168 RepID=RUVA_HALOH Length = 194 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G +I K V++E GGVGY V +P T L G++ +F + VRED+ L Sbjct: 1 MIGYLKGNVIWKAENKVILETGGVGYRVLVPSTV--RLKPVGEKLELFVYTYVREDSLDL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER LF+ L+ +G+GP+ A+ ILS +S ++F+ A+ E+V L ++ GIG KT Sbjct: 59 YGFKTMEERELFETLLSVSGIGPRAAINILSSLSYKKFIEAILTEKVSILKQVSGIGPKT 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K + K + GD P D+ E AL +LGY E Sbjct: 119 AKRLILELKGKLKDMSGDF------------EEPLPDNRNTELSDALASLGYSELEIEEA 166 Query: 181 VSKIA-RPDASSETLIREAL 199 +S + + S E I++AL Sbjct: 167 LSNADIKNNGSLEENIKKAL 186 >UniRef50_B4WL13 Holliday junction DNA helicase RuvA n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL13_9SYNE Length = 207 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 109/209 (52%), Gaps = 17/209 (8%) Query: 1 MIGRLRGIIIEKQ---PPLVL--IEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MIG ++GI+ + Q V+ +E GGVGY++ + +LP+ G+ +FTH RE Sbjct: 1 MIGYVKGILADSQKLPNGRVIATVEAGGVGYDMQVNPRTLSQLPQVGEPVRIFTHLQSRE 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 D Q+L+GF++K ER +F+ LI +G+G ++ +++L+ + + + +V L + PG Sbjct: 61 DLQMLFGFSSKAERDVFRLLISVSGIGSQMGMSLLNALGLNELIQSVVNGNARVLTRTPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 +G KTAER+I+E+K + + + +P +++ LVALGY Sbjct: 121 VGNKTAERIILELKTKLSEWR-------SHSGIVAPTGGPISAVQEDVEMMLVALGYSNS 173 Query: 176 EASRMVSKI-----ARPDASSETLIREAL 199 E S+ + + E IREA+ Sbjct: 174 EISKALVAVGNGTALSKSDDVEDWIREAI 202 >UniRef50_Q5NR75 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Zymomonas mobilis RepID=RUVA_ZYMMO Length = 213 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 8/210 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL G ++EK +I+V GVGY V + E E V +RED+ L Sbjct: 1 MIARLVGFLVEKNSDSAVIDVNGVGYLVQLSGRALDYFSEIEGEITVHIETQIREDSITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L GVG K ALAIL+ ++ A+ + + + GIG K Sbjct: 61 FGFASYLERDWFRLLTSVQGVGGKAALAILTALTCDAISVAISSGDKTMICRANGIGPKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATD-----DAEQEAVAALVALGYKPQ 175 A+R+I E+K++ + L + + PA + +AV+AL+ LG+KP Sbjct: 121 AQRIINELKEKPAAIALFSSAKGDHLAVEDISQPAASAHHAGNFMADAVSALLNLGFKPA 180 Query: 176 EASRMV---SKIARPDASSETLIREALRAA 202 EA R+V S+ A+ ++L+R ALR + Sbjct: 181 EAQRVVQLASEELGDQATLDSLVRLALRLS 210 >UniRef50_B0TF69 Holliday junction DNA helicase ruva n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF69_HELMI Length = 274 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 69/269 (25%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ +L++V GVGY V +P T LP+ G++ ++ T + RED L Sbjct: 1 MIAFLRGRLVGLGDDCLLLDVSGVGYRVFVPATMLASLPQVGRDILIHTFYYAREDQVSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E F+ L++ +GVGPK+ L ILS S + A+ E+V AL ++PGIG+KT Sbjct: 61 YGFLTEEELAFFRLLLEVSGVGPKVGLGILSAYSVVEVQRAIIAEDVLALTRIPGIGRKT 120 Query: 121 AERLIVEMK--------------------------------------------------D 130 A+RL++E++ + Sbjct: 121 AQRLVIELRDKLLKQGVRAVPVFGVDPFLEEASSQEQDQNAQDPLQQEQSPGSPEEQLPE 180 Query: 131 RFKGLHGDLFTPAADLVLTSPASPAT----------------DDAEQEAVAALVALGYKP 174 + + L P++D + SP EA +AL LGY Sbjct: 181 KASLQNHSLKDPSSDRHVPEGTSPLARRRKKAVPAGADRMWKTSPRDEAFSALQVLGYTA 240 Query: 175 QEASRMV---SKIARPDASSETLIREALR 200 EA + + + PDA E I+ ALR Sbjct: 241 NEARDALVEAAALVPPDADVEAWIKGALR 269 >UniRef50_C0WEE9 Holliday junction DNA helicase ruvA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEE9_9FIRM Length = 201 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 72/203 (35%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG ++G + +E GVGY ++M + + + V+T+ VREDA L Sbjct: 1 MIGFIKGRVDTIGSNYAFVETQGVGYRIYMNTSDLGRMV-LDDKVKVYTYLAVREDALTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF +LI +G+GPK+A ILS F+ A++ +V L KLPGIGKKT Sbjct: 60 YGFLSQEAYGLFTKLITVSGIGPKVAQGILSASKVDDFLLAIKNRDVKFLTKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD + P ++ +P PA A E + AL +LGY E S + Sbjct: 120 AERMLLELKD---LTGPEGPLPESNGGFLAPEGPA--SALTETMEALASLGYTQNEISGV 174 Query: 181 VSKIA-RPDASSETLIREALRAA 202 +++I D S+E L+++AL+ Sbjct: 175 MNRIKVTADMSAEDLLKKALQVM 197 >UniRef50_C4FZH5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZH5_ABIDE Length = 204 Score = 203 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 1/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + V+I+V G+G E +P T LP+ + + T+ VRED L Sbjct: 1 MIASVKGKLEGVTTESVIIDVNGLGVEAIVPTTVINLLPKIDENIKLHTYLHVREDVMQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K++ FK LI NG+GPK A+AILS M A+ E+ + K GIG KT Sbjct: 61 YGFLEKEDLDFFKLLITVNGIGPKAAIAILSSMPTDILTFAILSEDTKTIQKAQGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++L++E+KD+ + T + + + + EAV L ALGY EA + Sbjct: 121 AKKLVLELKDKVGIIKTPQNTGSEIYDNAALTIGINSEIKDEAVQVLTALGYSQTEAVKA 180 Query: 181 VSKIAR-PDASSETLIREALR 200 +S + + +SE L++ +L+ Sbjct: 181 ISTVEMYEEMTSEELVKLSLK 201 >UniRef50_B2A5L5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVA_NATTJ Length = 214 Score = 203 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 9/209 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG ++E P ++ GG+GY++++P C E+P+ GQE + T+ VREDA L Sbjct: 1 MITRIRGEMLEITPDYCVVMAGGLGYKIYIPDNCQEEIPDPGQEIDLHTYLSVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ++ +F+ ++ +G+GPK+ALA++ + +F +V ++V L K+PGIGKK+ Sbjct: 61 YGFTSGEQLAVFELIMNVSGIGPKIALALVGTIPPTEFYLSVLNDQVNQLTKVPGIGKKS 120 Query: 121 AERLIVEMKDRFKGLHGD------LFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 A+R+I+E+K++ K + + D E AAL +LGY Sbjct: 121 AQRIILELKEKVKDITSKDAYQDISASEKLDNTGEKLGISTRHKHLDELKAALSSLGYTN 180 Query: 175 QEASRMVSKIAR---PDASSETLIREALR 200 +E + V I E L+R AL+ Sbjct: 181 REIEKTVDAIQGQITEGQDMEELLRLALQ 209 >UniRef50_B3EU33 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=RUVA_AMOA5 Length = 194 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 109/204 (53%), Gaps = 13/204 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I K P ++++VGG+GYE+ + + + L + +FT+ + +DA L Sbjct: 1 MIAYIQGSITYKSPTQLIVDVGGIGYELQISLQTYDSLKDIAASCKIFTYLHITQDAHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E+ F +L+ NG+GP++A+ ILS ++ + A+ + L + GIG+K Sbjct: 61 YGFSTIEEKQCFLQLLSVNGIGPRVAITILSALTPEALQQAIMTHDTITLQAVKGIGQKA 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++ + + L + + QEA+AAL LG A + Sbjct: 121 AQRIILELQGKVGKVGNMLSLQPSG----------QEAIYQEALAALSKLGIHKSTAEKT 170 Query: 181 VSKIARP---DASSETLIREALRA 201 V+ I + + + E+LI+ AL+ Sbjct: 171 VAAILKEHQGEITVESLIKLALKG 194 >UniRef50_Q2JWZ2 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Synechococcus RepID=RUVA_SYNJA Length = 204 Score = 202 bits (514), Expect = 6e-51, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQ---PPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDA 57 MI L G ++ + + +EV G+GY V P +LP G+ VFTH VVRE Sbjct: 1 MIAFLSGHLVAIEWGERSSLTVEVQGIGYRVKAPARFLKQLPPIGEPVRVFTHLVVRETE 60 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 +LYGF + ER +F ELIK +GVGP L LA+L+ + V AV E V L PG+G Sbjct: 61 LVLYGFGSPAERDVFVELIKVSGVGPALGLALLNTFGLPELVQAVVTENVRLLSLTPGVG 120 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KTA+RL +E+K + L L P + +E AL+ALGY QE Sbjct: 121 HKTAQRLALELKTKLAHWRQGLENADRPLAGGPPPA-----IREEVEMALLALGYSLQEI 175 Query: 178 SRMVSKIARPDASSETLIREAL 199 + + +E +R+A+ Sbjct: 176 QAALQALPSQPRPTEEWLRDAI 197 >UniRef50_Q24UN6 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfitobacterium hafniense RepID=RUVA_DESHY Length = 201 Score = 202 bits (514), Expect = 7e-51, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + E Q ++++V GVGY++ +P + G E I++TH ++RED L Sbjct: 1 MIGMLRGKVWEIQADKLILDVQGVGYQLSIPYGLLGK-AHPGHELILYTHVILREDELAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ E+ LF ++ +G+GPK AL+ILS + Q +A+ E + L K+PGIGKKT Sbjct: 60 YGFSSAAEKELFLLMLSVSGIGPKAALSILSTLGIGQTESAIASENITLLTKVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K++FKG L L A EA+ L+ALG+ +EA + Sbjct: 120 AQRLILELKEKFKGRAIALEGIEGAGSLPQAA------FHSEAMETLLALGFSQEEAKKA 173 Query: 181 VSKIAR--PDASSETLIREALRA 201 + + S+E +R ALR+ Sbjct: 174 LQALPDSAQALSTEEQVRLALRS 196 >UniRef50_Q3ZZK6 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Dehalococcoides RepID=RUVA_DEHSC Length = 194 Score = 201 bits (513), Expect = 9e-51, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 13/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L GI+ +I V GVG+ +MP T + GQ VFTH VREDA L Sbjct: 1 MISSLNGILEASGKDWAVINVSGVGFRCYMPATSPALIGGLGQRVRVFTHLHVREDALSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E +LF+ LI +G+GPKL LA+LS M+A+ +A+ L +PGIGKKT Sbjct: 61 FGFATTEELSLFETLIDVSGIGPKLGLAMLSVMNAEALASAIISGNAELLSTIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 + R+I+E+KD+ + +A + +A L ALGY EA++ Sbjct: 121 SSRIILELKDKIAK------------NWEAGVLSQVTEANSDILATLTALGYSSSEAAKA 168 Query: 181 VSKI-ARPDASSETLIREAL 199 +S + D E I+ AL Sbjct: 169 ISSLGDNGDLPLEERIKLAL 188 >UniRef50_Q7NCU2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gloeobacter violaceus RepID=RUVA_GLOVI Length = 206 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 12/207 (5%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI +RG++ E P ++VGGVGY V +LP G+E +FT +VRED Sbjct: 1 MITFVRGMLAEVGPRSGQSWATVDVGGVGYRVWTHARTVGKLPRIGEEVKLFTLMIVRED 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A L+GF ER LF +L+ +G+GP++ LA+L ++ + V A+ + AL PG+ Sbjct: 61 AMQLFGFLEPGERELFGQLVSVSGIGPRMGLALLETLAPTELVQAILQGNTRALALAPGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G KTA+RL +E++ R + L++ + A+ +E AL+ALG+ P E Sbjct: 121 GAKTAQRLALELRSRLSKWR-------EESGLSAMGARASSRVYEEVELALLALGFAPGE 173 Query: 177 ASRMVSKIARPDASSETLIREALRAAL 203 R + +A P + E LRAA+ Sbjct: 174 VVRALDAVA-PAMAGEEQTEAWLRAAI 199 >UniRef50_Q0AX15 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RUVA_SYNWW Length = 199 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + E++P ++I+V GVGYEV++ F LP+ G+ ++ T V E+ L Sbjct: 1 MIAFLKGAVFERRPDSIIIDVNGVGYEVNIHSRLFPRLPQRGEPILIHTFLQVLENEFKL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ E LFK L+ +G+G K ALA+LS M F A+ ++ LV++PG+GKKT Sbjct: 61 FGFLDQDELRLFKTLLTVSGIGSKGALAVLSTMEPLVFYRAIASQDEKTLVRIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I E++D+ L +L E + AL LGY E Sbjct: 121 AQRMIFELQDKVPELKLVEVEKEQRPLL------------DELMEALEILGYSRSEVLPA 168 Query: 181 VSKIARP---DASSETLIREALRA 201 + + R E I+ L+A Sbjct: 169 IMDLNRNKQLGNIVEENIKLVLKA 192 >UniRef50_B3DZD2 Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZD2_METI4 Length = 211 Score = 201 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 12/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G +I P +++EV G+G+EV ++ F LP E ++TH V E+ L Sbjct: 12 MISYLKGTLIYSLFPHIIVEVRGIGFEVFCSLSLFRNLPPLYSELTLYTHLEVSENRLEL 71 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 +GF + +E+ F+ L+ K +GVGP+ AL+IL+ + + AV R + L K+ GIG+K Sbjct: 72 FGFKDLEEQLTFRLLVEKVHGVGPRTALSILNVLPPSELKAAVGRADFRLLSKIKGIGEK 131 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA RL+VE+KD + A+ +S + D ++A+ ALVALGYK EA + Sbjct: 132 TAHRLVVELKDSWA---------TAEASSSSGTAIVGDRVFEDALRALVALGYKEPEALK 182 Query: 180 MVSKIAR--PDASSETLIREALRAA 202 + ++ P E +I+E L+ A Sbjct: 183 RLRRVREKHPQMDLEGIIKECLKLA 207 >UniRef50_Q1Q054 Strongly similar to DNA helicase RuvA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q054_9BACT Length = 196 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 116/203 (57%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ +RG +I K P +++EV GVGY +H+P++ F ++P G+ + T +RED L Sbjct: 1 MLDYIRGQVISKSPTKLVLEVAGVGYLLHIPISTFEKIPSRGE-VTIHTQLFLREDGIKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +ER LF+ L+ NGVGP +A+AILSG +A A+ RE+ AL+++ G+GKKT Sbjct: 60 FGFASDEERGLFQLLLSVNGVGPTMAIAILSGSTANDIKCAIAREDTKALMRIKGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+K+ KG + +A+ AL++LGY A Sbjct: 120 AERIVLELKESVKGAKASIDIEMDGRQRAFA---------DDAIMALISLGYGRPVAENA 170 Query: 181 VSKIARPDASS---ETLIREALR 200 V + + S E L+REAL+ Sbjct: 171 VKEAVKKLNSVDNIEVLVREALK 193 >UniRef50_A8FFR3 Holliday junction ATP-dependent DNA helicase ruvA n=20 Tax=Bacillales RepID=RUVA_BACP2 Length = 201 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I P V+IE GGVGY+V+ P Y++ ++ ++T+ ++EDA L Sbjct: 1 MIEFVKGTIDYVCPQYVVIENGGVGYQVYSPNPFIYQI---NKQETIYTYHYIKEDAFSL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ LF +L+ G+GPK ALAIL+ ++A+ERE+ L+K PG+GKKT Sbjct: 58 YGFQTREEKALFTKLLNVTGIGPKGALAILASGDPGAVISAIEREDEAFLIKFPGVGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+++K + + ++ + A EA+ AL LGY +E ++ Sbjct: 118 ARQIILDLKGKLADVVPEMIGNLFN-HEDHIQVETQQTALDEALEALSVLGYGDREIKKV 176 Query: 181 VSKIARP-DASSETLIREALRAAL 203 + + +++ +++AL+ L Sbjct: 177 YPLLKEEKNLTTDQYVKKALQKML 200 >UniRef50_B2HN62 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Actinomycetales RepID=RUVA_MYCMM Length = 197 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++E V+IE GVGY V+ + L + G +A + T +VRED+ L Sbjct: 1 MISSLRGEVLEVALDHVVIEAAGVGYRVNATPSTLATLRQ-GTDARLITAMIVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + R LF L+ +GVGP+LA+A LS A A+ +V AL ++PGIGK+ Sbjct: 60 YGFVDGETRDLFLTLLSVSGVGPRLAMATLSVHDANGLRQALADGDVTALTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+ PA + V ALV LG+ ++A Sbjct: 120 AERMVVELRDKVGPAGSAATAPAVNGHTVRAP----------VVEALVGLGFAAKQAEEA 169 Query: 181 VSKIARPDASSETLIREALRAAL 203 K+ D E ALRAAL Sbjct: 170 TDKVLAGDG--EATTSSALRAAL 190 >UniRef50_C7NI46 Holliday junction DNA helicase subunit RuvA n=2 Tax=Actinomycetales RepID=C7NI46_KYTSD Length = 209 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G I +++EVGGVG V +P E+ GQEA + T VVRED+ L Sbjct: 1 MIASLSGTITHVGLDHLVVEVGGVGMRVLVPPQVAAEV-RTGQEARLETSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + R +F+ + +GVGP+LALA+++ +S + AV E++ AL +PGIGKK Sbjct: 60 FGFLDADTREVFETVQSVSGVGPRLALALVAVLSPAELSRAVHTEDLAALTSVPGIGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL++E+ + G P ++ P+ + AL LG+ +A++ Sbjct: 120 AQRLVLELVGKLPADLGGGAAPTT-TEQSAGGDPSEPAWAPQVRDALEGLGWNTAQATKA 178 Query: 181 VSKIAR-------PDASSETLIREALRAA 202 + P L+REALR A Sbjct: 179 TRTVVEQHAQDTGPPPELPVLLREALREA 207 >UniRef50_Q5L9Q7 Holliday junction ATP-dependent DNA helicase ruvA n=38 Tax=Bacteroidetes RepID=RUVA_BACFN Length = 201 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 5/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I E P +I+ G+GY V++ + + + + ++ + +REDA +L Sbjct: 1 MIEYIKGEIAELSPATAVIDCNGLGYAVNISLNTYSAI-QGKSSCKLYIYEAIREDAYVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +KQER LF LI +G+G A ILS +S + VN + E L + GIG KT Sbjct: 60 YGFADKQERELFLLLISVSGIGGNTARMILSALSPAELVNVISTENANMLKTVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IV++KD+ K PA A + ++EA+AAL LG+ + + Sbjct: 120 AQRVIVDLKDKIKTGAMAATAVGGAAGALLPAMNA--EVQEEAIAALTMLGFAAAPSQKA 177 Query: 181 VSKIAR--PDASSETLIREALR 200 V I + PDA E +I+ AL+ Sbjct: 178 VLAILKEEPDAPVEKVIKLALK 199 >UniRef50_D1N374 Holliday junction DNA helicase RuvA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N374_9BACT Length = 203 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 10/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL GI+ E +I+VGGVGYE +P++ F +LP+ G + + VREDA L Sbjct: 1 MIARLTGILAESSFSGCIIDVGGVGYEALIPLSTFDKLPQPGNKVELHIFTQVREDAITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E+ LF++LI +G+G K+AL++LS M F +A+ ++ +L ++ G+GK+T Sbjct: 61 FGFATPEEKKLFQQLINVSGIGGKIALSVLSSMPVSGFCSAIASGDIKSLSRISGVGKRT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+ + G + A LG+K ++ Sbjct: 121 AERMVVELRDKLGSVAGGSVFVPDAEQGGELTAAAEAALAL------EQLGFKRDAIDKV 174 Query: 181 VS----KIARPDASSETLIREAL 199 + ++ + + +++ L+R+ + Sbjct: 175 LKTLLAELPKSEHTTDKLLRQGI 197 >UniRef50_C9LLE4 Holliday junction DNA helicase RuvA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLE4_9FIRM Length = 201 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 4/200 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG ++G IE GG+GY V + ++ G + T+ VREDA LL Sbjct: 1 MIGYIKGKATVVSKEFCFIEAGGIGYRVFISEMSRQKI-HLGAPVRLLTYMAVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF LI + +GPK+A+ ILS M FV ++ + L KLPG+GKKT Sbjct: 60 YGFLTQEEYDLFLILISVSKIGPKVAMGILSVMEPADFVLSIRNRNLSVLTKLPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VE+KD+ L P +A L ALGY+ E + Sbjct: 120 AERLLVELKDKVGDFAEGDIDEPESLAAGKPDE---SGIAADAAKYLRALGYEDTEIQPV 176 Query: 181 VSKIARPDASSETLIREALR 200 + K++ L+ ALR Sbjct: 177 LKKLSIEYKDVSPLVSAALR 196 >UniRef50_C7MCB9 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCB9_BRAFD Length = 205 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + +++EVGG+GY V G E + T VVRED+ L Sbjct: 1 MIASLTGRVARIDLDSLVLEVGGIGYLVRTTPQALSA-TRHGAELTLHTELVVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E F+ + +G+GP+ ALA+L+ + ++ AV ++ + + PGIG K Sbjct: 60 FGFPQLEEAETFRIVQSVSGIGPRTALAVLAVLEPEELRRAVAEQDAKTITRTPGIGPKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E+ + P +PA+P+ DA + V ALV LG+ + A + Sbjct: 120 AGRMLLELGGKLPAPASLSAVP-GTPAAEAPATPSGADA--DVVEALVGLGWAEKAALKA 176 Query: 181 VSKIARPD---ASSETLIREALRA 201 V D S L+R ALR Sbjct: 177 VESARADDGAELDSAELLRRALRG 200 >UniRef50_Q4L6Y7 Holliday junction ATP-dependent DNA helicase ruvA n=14 Tax=Bacillales RepID=RUVA_STAHJ Length = 201 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 116/203 (57%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIE-VGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 M +RG + + P V++E + GVGYE+ P + ++ +E +++T +VREDAQL Sbjct: 1 MYAYIRGKLTQLFPTHVVVESINGVGYEIQTPNSYRFQ-KYLEKELVIYTSLIVREDAQL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF N++E+ +F LIK G+GPK ALAIL+ + + A+E E L K PGIGKK Sbjct: 60 LYGFINEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKMAIENENDAYLTKFPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA ++++++K + + L+ + + +++ +EA+ AL ALGY +E S+ Sbjct: 120 TARQIVLDLKGKVQITR----ETTETLLSMNEENSNSENLVKEALLALEALGYSKREISK 175 Query: 180 MVSKIARPD--ASSETLIREALR 200 V K+ S + ++ L+ Sbjct: 176 -VEKVLNKSTFDSVDEAVKLGLK 197 >UniRef50_C0GT45 Holliday junction DNA helicase RuvA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT45_9DELT Length = 203 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQP-PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI +RG ++ +++ G+GYEVH+ +P G+E + T VVREDA Sbjct: 1 MIALIRGTLVSFNDKSCLVMTASGLGYEVHVSAMGLQNMPGQGEELELHTSMVVREDALD 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L+ +GPK ALAIL S Q + E+ AL ++PGIG K Sbjct: 61 LYGFFTRDERETFNVLLNAPKLGPKTALAILGIFSPSQIQKIINTEDEAALTQVPGIGSK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA RLI+++KDR + P +P Q+ +A L +LGY E + Sbjct: 121 TARRLILDLKDRLGFISPQHEDPR--------PAPGPRGVRQDVLAGLTSLGYSAAEVTP 172 Query: 180 MVSKIA--RPDASSETLIREALR 200 ++ ++ PD + IR L+ Sbjct: 173 LLDEVLEKEPDLDVSSAIRAVLK 195 >UniRef50_C6X0H6 Holliday junction DNA helicase RuvA n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0H6_FLAB3 Length = 255 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + E P V+I+V GVGY V + + +L G+E + ++REDA LL Sbjct: 62 MIYSLKGNVQELNPTSVIIDVNGVGYYVGVSLQTSEKLV-LGKETFLNIQQIIREDAHLL 120 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GFN E+ LF LI NGVGP AL +LS +S Q+ +A+ L K+ GIG KT Sbjct: 121 FGFNTISEKELFNLLISVNGVGPVSALIMLSSLSLQEIASAILSGNSLLLQKVKGIGTKT 180 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+IV+++D+ + ++ + ++ + + EA++AL LG + + ++ Sbjct: 181 AERIIVDLRDKVQKF---------NISEGNISNFVNNKVKDEALSALEVLGIPKKMSEKI 231 Query: 181 VSKIARP--DASSETLIREALR 200 + + D S E L+++ L+ Sbjct: 232 ADRFLKTNADLSVEDLVKQILK 253 >UniRef50_C7H8Z7 Holliday junction DNA helicase RuvA n=3 Tax=Ruminococcaceae RepID=C7H8Z7_9FIRM Length = 202 Score = 198 bits (505), Expect = 9e-50, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G II+K V++ GGVGY V P + LP G+EA ++T V E+ L Sbjct: 1 MIYSLSGKIIKKTLNAVVVSCGGVGYYVQCPTSVAGALPGVGREATLYTVMSVAENDISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++++ F+ L +GVGPK+ LAILS M + A+ + A G+G K Sbjct: 61 YGFATEEQQSCFELLTAVSGVGPKVGLAILSVMEPDRVALAISAGDHKAFKAASGVGPKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ D T+ + AALV+LGY EA+ Sbjct: 121 AQRIVLELKDKVAKGFVDGINLEDVGAATAAPAAQGAGQAI---AALVSLGYSQSEAALA 177 Query: 181 VSKIARPDASSETLIREALRAA 202 VSKI E +I+ ALR Sbjct: 178 VSKI-DASLPVEEIIKLALRGM 198 >UniRef50_C8NUB4 Holliday junction DNA helicase RuvA n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NUB4_9CORY Length = 207 Score = 198 bits (504), Expect = 9e-50, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G +I +IE GVGY P L G+ V T VVRED L Sbjct: 1 MIDSLNGEVISIGLDHAVIECAGVGYRFLAPPPTLARLVR-GETTRVLTTLVVREDDMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + R++F L +G+GPKLA+A LS + + + + + +PG+GKK Sbjct: 60 YGFTDDDARSMFHRLTAVSGLGPKLAIAALSVFTPGELAAHITSGDAKTIQSIPGVGKKM 119 Query: 121 AERLIVEMKDRFKGL-HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+R+++E+KD+ +GL G + A + P + A ++ V ALV LG+ + A Sbjct: 120 ADRMVLELKDKLQGLYPGAAQSEAPEAAGEVPPISGSSFATEQVVEALVGLGFPEKSARA 179 Query: 180 MVSKIARPDASSET--LIREAL 199 V +A + +E+ L+R AL Sbjct: 180 AVDAVAAENDGAESSVLLRAAL 201 >UniRef50_B2RJ07 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Porphyromonas RepID=RUVA_PORG3 Length = 202 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I+ P ++IE GVGY+V++ +T + + +E +++ ++REDA LL Sbjct: 1 MIEYLKGAIVGLTPTNLVIECAGVGYDVNVSLTTYSAY-QGKKEGLIWITQLIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ K+ERTLF +L +GVGP A ILS + Q+ + + AL + GIG KT Sbjct: 60 YGFSTKEERTLFGQLTSVSGVGPTTARLILSSYAPQELAALITTGQADALKAVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IV++K + + L + A+ T + +EA++AL LG+ + Sbjct: 120 AQRIIVDLKGKIQ-LETSSDEILSARTAVGDAALNTIASGEEAISALKMLGFADPAIRKA 178 Query: 181 VSKIARPDAS--SETLIREALR 200 V I D+S E +I+ ALR Sbjct: 179 VKSILSEDSSLAVEDIIKRALR 200 >UniRef50_C7GZ09 Holliday junction DNA helicase RuvA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ09_9FIRM Length = 194 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 8/199 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I EK ++++ G +GY++++P+ + E +E +V+T +VRED L Sbjct: 1 MIKFLRGRIFEKLESCIVLDTGNIGYQINLPLNSPFFTAEISEEVLVYTELIVREDDMSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + F L+ NGVG K +LA+LS + + A+ ++ + + GIGKKT Sbjct: 61 YGFEDFKTLNFFNLLMNINGVGAKASLALLSVSTVDELARAIASKDTAFISRANGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ +E+ D+ + + +L + + + EA AL++LGY EA + Sbjct: 121 AERIALELSDKVESIAYNLPSNNE-------VTSVVSGNKAEACEALMSLGYNKNEAMNV 173 Query: 181 VSKIARPDASSETLIREAL 199 + + +++ IR+AL Sbjct: 174 LKSL-DEGLDTQSYIRKAL 191 >UniRef50_A1SJA6 Holliday junction ATP-dependent DNA helicase ruvA n=30 Tax=Actinomycetales RepID=RUVA_NOCSJ Length = 200 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG + ++EVGGVG ++ L GQ+A + T VVRED+ L Sbjct: 1 MIAFVRGQVAAVTLSSAVLEVGGVGLDIMCTPGTLATL-RVGQQAALPTSMVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ E+ F+ L +GVGPKLA A+L+ +S A+ ++V L ++PGIG+K Sbjct: 60 FGFADEDEKQTFELLQTASGVGPKLAQAMLAVLSTDDLRLAITGDDVKTLTRVPGIGQKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++DR P +PA + LV LG+ ++A + Sbjct: 120 AQRIILELRDRIGA-------PTGAGRSAGVPAPAGAVWRDQVHQGLVGLGWPVRDAEKA 172 Query: 181 VSKIARPDASSET---LIREALR 200 V+ +A L+R ALR Sbjct: 173 VAAVAPEAGDVPDVAALLRAALR 195 >UniRef50_C0W3R8 Crossover junction endodeoxyribonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3R8_9ACTO Length = 209 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 107/208 (51%), Gaps = 15/208 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +++ +IEVGGVG T L G+E V T VVREDA L Sbjct: 1 MIASLRGTVLDISLTGAVIEVGGVGMAFQATPTTLAGL-RVGEEGTVHTELVVREDALTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L+ GVG KLALAIL+ + A+ ++V AL ++PG+G K Sbjct: 60 FGFADADERQCFRVLLGAKGVGAKLALAILAVHTPDALRRAIASQDVAALKRVPGLGPKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA--TDDAEQEAVAALVALGYKPQEAS 178 A+R+I+++ D+ L G DL P +PA ++A + VAALV LG+ A Sbjct: 120 AQRVIIDVGDKLGPLTGQ------DLAAERPQAPAETGEEANPDVVAALVQLGWNEATAR 173 Query: 179 RMVSKIAR------PDASSETLIREALR 200 + V + S L+R +LR Sbjct: 174 QAVGAVESGAQEQGEALSVPELLRASLR 201 >UniRef50_Q5FQC5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gluconobacter oxydans RepID=RUVA_GLUOX Length = 200 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G++ + + +++V GVGY V LP+ A V +VREDA L Sbjct: 1 MIGQLTGLVGQIEGERCIVDVNGVGYVVSASTRTLAVLPQPPSVARVLIETIVREDAIQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L VG K+ALAILS + + + A+ + G+L + G+G + Sbjct: 61 FGFATTDERDWFRLLTTVQSVGAKVALAILSANNPGELLLAINAGDKGSLTRAAGVGPRL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++ E++++ + P +++P + E +A+ AL LG++ EA + Sbjct: 121 ADRILSELRNKVAKM------PGGGGTVSAPGIVSGPSVENDALLALAGLGFRRAEAWPV 174 Query: 181 VSKIA--RPDASSETLIREALR 200 +SK+ +A+ + IR +L+ Sbjct: 175 LSKVLAENENATLDLAIRLSLK 196 >UniRef50_C3J9S7 Holliday junction DNA helicase RuvA n=2 Tax=Bacteria RepID=C3J9S7_9PORP Length = 204 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 7/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G I P L++VGGVGY++++ +T + L + A ++ ++REDA LL Sbjct: 6 MIAYIEGKIDRLSPTNALLDVGGVGYDINITLTDYTAL-QGKPSARLWITEIIREDAHLL 64 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ R F++L +GVGP A ILS + + + V L + GIG KT Sbjct: 65 YGFVREESRAFFEKLCSVSGVGPSTARLILSSYTPNDLASIIGNGAVDLLKNVKGIGLKT 124 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++V++K + DL ++ + +P EA AL LG+ + Sbjct: 125 AQRIVVDLKGKIDLSAYDL----SEGMPEGGNAPEVAAVSDEAQRALKMLGFPEAAIRKA 180 Query: 181 VSKIARPDA--SSETLIREALR 200 V + DA E +I++AL+ Sbjct: 181 VKAVLGADAHLPVEEVIKQALK 202 >UniRef50_Q6A8K8 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Propionibacterium acnes RepID=RUVA_PROAC Length = 201 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI G + P V+++ GVG +V P Q+ + T VVRE++ L Sbjct: 1 MISHFSGTVSAAGPTWVVLDNHGVGIKVLCPPATAAS-ARINQDMSLHTSLVVREESLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +R F+ + +GVGPKLA AI+S + A Q A+ E+ L ++PGIG+K Sbjct: 60 YGFVEADDRDAFELVQTASGVGPKLAAAIMSVLDAAQLATAITEEDDATLCRVPGIGRKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+E+KD+ L + + + +P ++ LV LG+ ++A + Sbjct: 120 AAKMILELKDKVAALAPRGASASGATHVAAP-------WREQVAEGLVGLGWSTKDAEKA 172 Query: 181 VSKI-----ARPDASSETLIREALRA 201 V K+ A P S L+R ALR+ Sbjct: 173 VDKVVALKEADPAMSIGNLMRAALRS 198 >UniRef50_Q8U9K5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Rhizobiales RepID=RUVA_AGRT5 Length = 205 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L+G I E VL++V GV Y + ++ G+ ++F VRED L Sbjct: 1 MIGKLKGSIEEIGADYVLVDVHGVCYVAYCSARTLSKIGSVGEAVVLFIETYVREDQLKL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F L GVG K+ALA+LS +S + NA+ ++ + + PGIG K Sbjct: 61 FGFVSALEREWFNLLQSVQGVGSKVALAVLSTLSPSELANAIALQDKTMISRAPGIGPKV 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL+ E++++ GD +AV+AL LGY +A+ Sbjct: 121 AVRLVTELRNKAPAFAGDASASIGLKQELG--EGVASAPVADAVSALTNLGYSRDQAANA 178 Query: 181 VSKIAR---PDASSETLIREALR 200 V+ + S LIR L+ Sbjct: 179 VAAALKNGGEGGDSAKLIRLGLK 201 >UniRef50_C9RMJ7 Holliday junction DNA helicase RuvA n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ7_FIBSS Length = 202 Score = 196 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG++++K P V++E GVGY V++ +LPE G E I+ T+ VVRED+ L Sbjct: 1 MIERIRGVLVQKSPTFVVVECAGVGYGVNISAFTAGKLPEEGAEVILHTNLVVREDSMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF L++ NGVGPKLA ILSG + +N + + AL K+ G+GKKT Sbjct: 61 FGFADTTEKNLFLMLLEVNGVGPKLAQRILSGSTPADLLNMIASDNKSALGKIKGLGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 E++ + +K++ + L + + A A+ EAV AL LG K A + Sbjct: 121 CEQMTLTLKEKASNMLQALGDVEGSGITS---VGALTGAKLEAVLALHTLGVKDPAAEKA 177 Query: 181 VSK---IARPDASSETLIREALR 200 V K + A + LI EAL+ Sbjct: 178 VVKAVEVLGDGADAAALIPEALK 200 >UniRef50_C2D6U7 Crossover junction endonuclease RuvA n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6U7_9ACTN Length = 214 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 8/208 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE-AIVFTHFVVREDAQL 59 MI +L G ++E P V+++V GVGYE+ + LP GQ + +V+E+A Sbjct: 1 MIVQLTGTLVEVFPNSVVLDVQGVGYELGISANTAANLPACGQTAVTLLVRMIVKENAME 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+++QER F LI +GVGPKLALA+LS S E+V + ++PG+GKK Sbjct: 61 LYGFSSRQERNAFDRLIDISGVGPKLALAVLSTYSLSDLATIALSEDVTRMAQVPGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPAT-DDAEQEAVAALVALGYKPQEAS 178 A+RL++E+ D F +A+ + A +A +AL+A+G+ PQE Sbjct: 121 KAQRLLIELADVFAKDAELRILASAEQKTSGAREQAPQHSVLDDAQSALLAMGFTPQEVE 180 Query: 179 RMVSKIAR------PDASSETLIREALR 200 + + P +++T+I +AL+ Sbjct: 181 LALKPYDKKECNDNPSLTAQTVITQALQ 208 >UniRef50_C7RHH1 Holliday junction DNA helicase RuvA n=5 Tax=Anaerococcus RepID=C7RHH1_ANAPD Length = 195 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + + +IE +GY + + + E E ++T VRED L Sbjct: 1 MISYIIGHVRSIKEDSFIIENNNMGYLIFSSLKTLSNI-EINNEYKIYTSMQVREDDISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E +F L + +GPK+A+ ILS +S + A+ ++ L GIGKK+ Sbjct: 60 FGFFTKDELEMFTLLTSVSTIGPKIAMGILSSISVNEIKTAIINNDIDKLTVAKGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+ D+ K + F P ++ L S + D A AL+ LGY+ + ++ Sbjct: 120 ASRIILELVDKVKKMD---FVPVENIELNSKDNEEIDV----AREALLNLGYEKNDVEKV 172 Query: 181 VSKIARPDASSETLIREALR 200 + ++ D S E L++E+L+ Sbjct: 173 LFELKDTDLSLEGLVKESLK 192 >UniRef50_C5VM52 Holliday junction DNA helicase RuvA n=5 Tax=Bacteroidales RepID=C5VM52_9BACT Length = 205 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 112/207 (54%), Gaps = 12/207 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVV----RED 56 MI +RG + + P L ++E GVGY +++ + + + + ++ H + R+D Sbjct: 1 MIEYIRGELADLTPALAVVEAHGVGYALNISLNTYSAI-QGKTAVKLYVHEAIMTGGRDD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF NKQER+L++ LI +GVG A ILS ++ + N + + L + GI Sbjct: 60 NYTLYGFANKQERSLYRLLITVSGVGANTARMILSSLTPAELCNVIANGDEKMLKTVKGI 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA-EQEAVAALVALGYKPQ 175 G +TA+R+IV++KD+ V + P +PA + A + EAV+AL LG+ P Sbjct: 120 GLRTAQRIIVDLKDKI----MQSGIADELHVSSQPNTPAVNAAIKDEAVSALTMLGFSPA 175 Query: 176 EASRMVSKIA--RPDASSETLIREALR 200 ++++V I +PD E +++ AL+ Sbjct: 176 PSAKVVVSILTEQPDLPVEQVVKLALK 202 >UniRef50_A5CX58 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=A5CX58_VESOH Length = 202 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 82/200 (41%), Positives = 128/200 (64%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G I+EK PP +L+EV +GYE+ M+ FY + + ++ ++TH ++E+A +L Sbjct: 3 MIGKLSGTILEKNPPEILLEVDKIGYEILCSMSSFYAMGDE-EQLSLYTHLSIKENAHIL 61 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K E+TLF+ELI+ NG+GPK+ALAILS + + + L K PGIG KT Sbjct: 62 YGFISKDEKTLFRELIRINGIGPKVALAILSHLDINSLIKVITDGNDTLLAKTPGIGIKT 121 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++LIVE+KDR + L + ++ + +P ++A AAL ALG+K +E+ +M Sbjct: 122 AQKLIVELKDRLEKLKLNN-ENHKNIHIKFKKNPNI----KQASAALQALGFKARESEKM 176 Query: 181 VSKIARPDASSETLIREALR 200 +S I S++ LIR+AL+ Sbjct: 177 LSVIKDNSLSTKALIRQALQ 196 >UniRef50_C6C065 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfovibrio RepID=RUVA_DESAD Length = 203 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G ++E +I GGVGYE+ + ++ LPE+G + + H V+REDA Sbjct: 1 MIAYIHGKLLEATDKSCIILTPGGVGYELFLTLSAISTLPESGSDVTFYVHSVIREDAFD 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +R +F+ LI + +GPK ALAILS + + V RE+V L +PGIG K Sbjct: 61 LYGFPCFDDREVFRTLISVDRLGPKKALAILSQFGPKDLQDLVFREDVKTLSIVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A +++ +KD+ + L A V + +A++ L LGY E Sbjct: 121 SARQILWSLKDKMETLKSATVRSGACPVEGDRSE------FLDALSGLRNLGYGDDEVRD 174 Query: 180 MVSKI--ARPDASSETLIREALR 200 + I PD + IR AL+ Sbjct: 175 FLKDIFDEEPDLDAGGAIRVALK 197 >UniRef50_B3DRX9 Holliday junction ATP-dependent DNA helicase ruvA n=18 Tax=Bifidobacteriaceae RepID=RUVA_BIFLD Length = 208 Score = 196 bits (498), Expect = 6e-49, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 10/207 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + LI+VGGVGYEV M T L AGQ+ VFT+ + +DA L Sbjct: 1 MIGMLTGRVESVETDTALIDVGGVGYEVRMSATDLSRL-HAGQDTRVFTYMNLSQDAITL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ + F +LIK +G+GPK+A ++LS ++ Q +A+ + AL K PG+GKK Sbjct: 60 HGFLDRDAKKTFLQLIKVSGIGPKVAQSLLSTLTPSQLAHAIADNDATALAKAPGLGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+K DL + + D ++ V L++LG++ Q+A + Sbjct: 120 AQKIILELKGSI-----DLSQIEGASAQAATSKSPVDTGTEQVVEGLISLGWRQQDAQQA 174 Query: 181 VSKIARPDAS----SETLIREALRAAL 203 V++ + + + LR AL Sbjct: 175 VAEACAENDIPTPLATDDVPRVLRLAL 201 >UniRef50_C4LIX8 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=RUVA_CORK4 Length = 207 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 2/203 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++ V+IE GVGY + L G++A + VR+D L Sbjct: 1 MIDSLHGEVLHVGLNYVVIECSGVGYRATASPSLLGTL-RKGEDARILVTMNVRDDGIDL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F + + R +F L K +GVGP A+AI S +F + E+ L + GIGK+T Sbjct: 60 YAFESDEARQMFAMLRKVSGVGPTSAMAICSIFKPDEFARIITDEDDAELRNVKGIGKRT 119 Query: 121 AERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AER+IV++K + GD + V + + ALV LG+ ++A + Sbjct: 120 AERIIVDLKSKVAVFDSGDSASEPQSGVGGNSEAEVDSGVVGTVTQALVELGFPEKQAEK 179 Query: 180 MVSKIARPDASSETLIREALRAA 202 + A S +++ ALR+ Sbjct: 180 TATSAAAEGGSVSEILKRALRSM 202 >UniRef50_D1PT53 Crossover junction endoribonuclease subunit A n=6 Tax=Prevotella RepID=D1PT53_9BACT Length = 206 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 61/206 (29%), Positives = 111/206 (53%), Gaps = 9/206 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVV----RED 56 MI ++G + E P L ++E GG+GY + + + + ++ + + ++ H + R+D Sbjct: 1 MIEYIQGELTELTPALAVVETGGIGYALSISLNTYDDI-QGKKAVKLYVHEAIQTGGRDD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF +KQER L++ LI +GVG A +LS ++ ++ NA+ + + GI Sbjct: 60 NYTLYGFASKQERELYRMLITVSGVGANTARTMLSSLTPKELCNAIANGNEKLIKSVKGI 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G KTA+R+IV+++D+ + + + S + EAV+AL LG+ P Sbjct: 120 GLKTAQRVIVDLRDKI--VSSGIAEVLHAGTPDTKVSAVNTAVKDEAVSALTMLGFSPAP 177 Query: 177 ASRMVSKIA--RPDASSETLIREALR 200 A++ V+ I +PD E +++EAL+ Sbjct: 178 ATKTVTAILTEQPDMVVEMVVKEALK 203 >UniRef50_Q6MKB7 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Bdellovibrio bacteriovorus RepID=RUVA_BDEBA Length = 196 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 108/201 (53%), Gaps = 13/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 MIG LRG IIE LI+V GVGYE+H +L G + IV+ H VREDA Sbjct: 1 MIGYLRGKIIEVMNDSALIDVSGVGYEIHASSNTLGDLQALLGNDIIVWIHTHVREDALQ 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF++K+E+ LF L+K NGVGPK+AL+ILSG Q +E AL LP +GKK Sbjct: 61 LFGFHDKEEKNLFLSLLKVNGVGPKMALSILSGGRPAQIHEMIEAGNAKALSGLPKVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAE++I+ +K + + + A A + +AL+ LGYK Q + Sbjct: 121 TAEQIILTLKGKLVSIEE-----------GGVVAKAKSVAHTQITSALLNLGYKSQLVDQ 169 Query: 180 MVSKIARPDASSETLIREALR 200 VS + D + E IR+ + Sbjct: 170 FVSSLP-ADIAVEDGIRKGFQ 189 >UniRef50_D1CDK2 Holliday junction DNA helicase RuvA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDK2_THET1 Length = 192 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I K ++++VGGVG V P + E+ E G E + TH +VREDA L Sbjct: 1 MIASIKGHIEYKLNDGLIVQVGGVGLRVFTPSSMVREIGEIGDEVYLHTHLMVREDALTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +++ LF+ LI GVGP AL ILS S ++ A+ +E +P IGKK Sbjct: 61 YGFSTREQLRLFELLISVTGVGPNHALNILSSASVEEIQTAIAQENAQFFSLIPRIGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K + + + A ++E V+AL+ALGY EA Sbjct: 121 AARIILELKGKVE--------------PSGEAVQIISHKDEELVSALLALGYTLGEAQAA 166 Query: 181 VSKIA-RPDASSETLIREAL 199 V + + E +R AL Sbjct: 167 VRSLPTDKELPMEEKLRLAL 186 >UniRef50_B0S1J4 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Finegoldia magna RepID=RUVA_FINM2 Length = 198 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G+I E +++E +GY++ + F + A E V+T FV REDA +L Sbjct: 1 MYSYIIGVITEVHENYIVLENNNIGYKIFITD-FFRDNVSAFDEYKVYTEFVEREDASIL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++ER LF L +GPK A+ ILS M+ + A+ +++ L + PG+GKKT Sbjct: 60 YGFSSQKERELFNLLTDVTSIGPKYAMNILSTMTVDECKTAIITDDIKLLTQAPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K++ + P V S S A AL+ LGY + Sbjct: 120 ASRIILELKEKIEKDFVPSEKPVNKEVKRSNDSEF-------AREALLQLGYFKNDVDAF 172 Query: 181 VSKIARPDASSETLIREALRA 201 + S E ++++A+++ Sbjct: 173 IENTDISGLSIEDIMKKAMKS 193 >UniRef50_C1A615 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RUVA_GEMAT Length = 197 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 14/202 (6%) Query: 1 MIGRLRGIIIEKQPPLV-LIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI ++RG I+ ++ V ++ GV YE +P++ F LP GQ + TH VVREDA Sbjct: 1 MISQVRGTIMHRELDRVEIMTASGVAYECLIPLSVFESLPSEGQTVTLHTHLVVREDAWH 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F++L+ GVGP LAL ILS ++ + V A+ ++V L+++P +G+K Sbjct: 61 LYGFAHAYERAVFQKLLHAKGVGPALALGILSALTPDRVVRALHEKDVLTLMRVPRVGRK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AE++I+++ D+ + T A L +AV AL+ALGY EA R Sbjct: 121 KAEQIILDLADKIDAVGPAPATGTAPSPLG-----------DDAVRALIALGYNQTEADR 169 Query: 180 MVSKIARPDA--SSETLIREAL 199 V + A +L+R AL Sbjct: 170 AVRAVVESGAPKDVSSLVRGAL 191 >UniRef50_A0JXB2 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Actinomycetales RepID=RUVA_ARTS2 Length = 214 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + +I++ G G V+ L G+E +FT +VRED+ L Sbjct: 1 MISFLRGTVAHVGLSSAVIDLNGAGMSVNATPQTLSGL-RTGEEGKLFTSLIVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF++ ER +F L+ +GVGP+LALA+L+ + A + A K+PGIG K Sbjct: 60 FGFSSDDEREVFDVLLSVSGVGPRLALAVLAVHDPEAIRVAAHTGDGKAFTKVPGIGPKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E+ + P +PA+ A+ + + VAA+ +LG+ ++A+ Sbjct: 120 AGRIVLELAGKL--------VPHGTGAAAAPAAAASAPWKPQVVAAMTSLGWSEKDATSS 171 Query: 181 VSKIARPDASSET--LIREALRAAL 203 + K E + E LRA L Sbjct: 172 IDKALSDSPELEAGGQVAEILRATL 196 >UniRef50_C6XF74 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF74_LIBAP Length = 207 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 3/205 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+++G I VLI+V GV Y ++ P+ L + G +F +R+D L Sbjct: 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +R F L GVG ++A+ +LS ++A + V ++ + + ++PGI K Sbjct: 61 FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++ E+K + L + + + + A++ALV LGY +A+ Sbjct: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180 Query: 181 VSKIARPD---ASSETLIREALRAA 202 V + + + A +IR ALRA Sbjct: 181 VVSVLKKEKNIADDSQIIRLALRAI 205 >UniRef50_Q3ABX9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RUVA_CARHZ Length = 195 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G +++K V+++V G+G++V + L E +++T VRED L Sbjct: 1 MIAVLKGKVLDKTLDSVVVDVNGIGFKVAVLPRELGSL-NLNSEVVMYTSLQVREDGWFL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++ R F L+ +G+GPK ALAIL+ + ++ + ++ AL K+PG+GKK Sbjct: 60 YGFSDEETRKFFDLLLSVSGIGPKAALAILNEFTPEKLNWVIANKDEKALTKVPGVGKKN 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL +E+KD+ + D + L++LG EA + Sbjct: 120 AQRLFLELKDKIGY---------TSFTSNEESVENFQDLWGDVYKGLLSLGLSAAEAREI 170 Query: 181 VSKIARPD-ASSETLIREALR 200 + KI + + E I ALR Sbjct: 171 LGKIDKKSVKTPEEGIALALR 191 >UniRef50_B2GB19 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Lactobacillus RepID=RUVA_LACF3 Length = 200 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G+I P ++++V GVGY V + Y+ + Q VF + V+EDA L Sbjct: 1 MFEYLTGLITMVSPDFIVVDVNGVGYRVAVANPYAYQ-EDDQQAVQVFIYQAVKEDAITL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF +LI +G+GPK ALAIL+ Q ++A++ + L K PGIGKKT Sbjct: 60 FGFATQAEKRLFTQLIGVSGIGPKSALAILATPDHQGLIDAIQNGDDKYLSKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ + ++ P++ D +LGY ++ R+ Sbjct: 120 ASRIIIELKDKVVAVQDEVQLDFTAPGPLGPSAALQDALAAL-----ESLGYTTKQVERV 174 Query: 181 VSKI--ARPDASSETLIREALR 200 ++ + + S+ + + L+ Sbjct: 175 QKQLEGLQGELSTNDYLSQGLK 196 >UniRef50_Q0F2I8 Putative Holliday junction DNA helicase RuvA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2I8_9PROT Length = 188 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 17/203 (8%) Query: 1 MIGRLRGIIIEKQP-PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G + P VL+ GG+GY+V + + +L G+ A + H VRED Sbjct: 1 MIGWLSGTVRALDPAGSVLLVTGGIGYDVSVSVQTLCKL-RLGEAAELSIHTYVREDQIT 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF N ER +F++L +G+G ++AL ++ GMS ++ + A+E + A+ + PGIGKK Sbjct: 60 LFGFANSNEREIFRKLTSVSGIGARMALNLMGGMSIEELIGAIEHADDLAIARTPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+RLI+E++ + + + A + E +AL LGYKP + Sbjct: 120 TAQRLILELQGKLGSVAAE-------------GGAAISNKADEVRSALTNLGYKPAQIDL 166 Query: 180 MVSKIARPDASSETLIREALRAA 202 + + A E++ R AL+A Sbjct: 167 ALKHV--EPADFESMFRAALKAM 187 >UniRef50_B1MCJ1 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Actinomycetales RepID=RUVA_MYCA9 Length = 202 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 12/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G +I+ V+IE GVGY V+ L G + + T +VRED+ L Sbjct: 1 MIASVNGEVIDIALDHVVIEAAGVGYRVNATPATLSTL-RRGTQIRLITAMIVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + R LF L+ +GVGPK+A+A L+ A A+ +V AL ++PGIGK+ Sbjct: 60 YGFTDTDARDLFTTLLGVSGVGPKIAMATLAVYDAPTLRQALADGDVAALTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ G + V AL+ LG+ ++A + Sbjct: 120 AERLVLELREKVAAAPGGTTELGRGTASL---------VRSQVVEALIGLGFAAKQAEQA 170 Query: 181 VSKIARPDA--SSETLIREALRAAL 203 + D + + LR+AL Sbjct: 171 TDTVLAQDNPGDTGADVSGVLRSAL 195 >UniRef50_UPI000050F77A Holliday junction DNA helicase, RuvA subunit n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F77A Length = 206 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 14/202 (6%) Query: 2 IGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY 61 I L G + ++I GVG V++ G + + T VVRED+ L+ Sbjct: 10 ISFLSGTVHRIAADHLVILTYGVGRRVNVTPDTLSN-TRHGADIELVTTLVVREDSMTLF 68 Query: 62 GFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTA 121 GF + E F+ L+ +G+GP+LA+AILS M + A+ ++ AL ++PGIGKK A Sbjct: 69 GFGTEDENHTFEVLLSISGIGPRLAMAILSVMGPGELAAAISNQDANALTRVPGIGKKGA 128 Query: 122 ERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMV 181 R+I+E++++ L P A Q+ V ALV LG+K +A+ +V Sbjct: 129 SRIILELENKLPKLSASEPGPQLSF----------GGANQQVVDALVGLGWKEAQAADVV 178 Query: 182 SKIARP---DASSETLIREALR 200 ++ +A + L++ +L+ Sbjct: 179 QEVVNDLGQNAGTSALLKASLK 200 >UniRef50_A8YTI1 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Lactobacillales RepID=RUVA_LACH4 Length = 196 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 10/193 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GI+ P ++++V GVGY+V+ P Y+ G +A +F VVR+ L Sbjct: 1 MYEYFEGIVTVITPSYIVVDVNGVGYKVYSPTPFAYQ---KGDKAKIFIEQVVRDTGITL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ++ LF +L+ +G+GPK ALAI++ A A+E+ EV L + PG+GKKT Sbjct: 58 YGFQSEDDKGLFLKLLSVSGIGPKSALAIMAAEDANSLAEAIEQGEVKYLTRFPGVGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + + L + SPA +A+ AL+ALGY +E R+ Sbjct: 118 ASQIVLDLKGKLRDYVARLDRQDEEQGNISPA-------LNDALLALIALGYTQKEVDRI 170 Query: 181 VSKIARPDASSET 193 +K+ +A + Sbjct: 171 TTKLEEVNADTAD 183 >UniRef50_B0NYV4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYV4_9CLOT Length = 190 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 113/192 (58%), Gaps = 5/192 (2%) Query: 13 QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLF 72 P +V+++ G+GY++ +PM P+ GQE ++TH VRED L+GF +K+E+ F Sbjct: 2 SPGMVVVDNHGIGYQMMVPMRG-ESFPKIGQEIKIYTHMHVREDDVSLFGFLSKEEKEAF 60 Query: 73 KELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRF 132 + LI NG+GPK+ L++LS +S + AV E+V + K PG+G K A++LI+E+KD+ Sbjct: 61 ELLIGVNGIGPKVGLSVLSTLSVYELKMAVISEDVKTISKTPGLGPKGAKKLILELKDKL 120 Query: 133 KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIAR-PDASS 191 + A++ TS S D+ + LV+LGY EA+ V+K+ D + Sbjct: 121 SFEELEEDGVGAEIFDTSADS---SDSVMITIEGLVSLGYSKSEAAIAVNKVEDAKDLTP 177 Query: 192 ETLIREALRAAL 203 E L+++AL+ + Sbjct: 178 EELLKKALKNIM 189 >UniRef50_B5XJ07 Holliday junction ATP-dependent DNA helicase ruvA n=70 Tax=Streptococcaceae RepID=RUVA_STRPZ Length = 198 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 109/200 (54%), Gaps = 7/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + + +++E G+GY +++ + Q ++ H V+REDA LL Sbjct: 1 MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFT-HSVNQLVTIYLHQVIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+ + E+ +F +LI +G+GP ALAI++ + VNA++ ++ L+K P IGKKT Sbjct: 60 FGFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++++++ +F + P + ++ A + EA+ AL+ALGY E ++ Sbjct: 120 AQQMVLDLAGKF------VEAPQETGHTKARSNKAGNTQLDEAIEALLALGYTATELKKI 173 Query: 181 VSKIARPDASSETLIREALR 200 + ++E I+ AL+ Sbjct: 174 RAFFEGTSETAEQYIKSALK 193 >UniRef50_A8RC90 Putative uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=A8RC90_9FIRM Length = 193 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 17/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++GII ++IE G+GY +++ L E I++T+ VREDA L Sbjct: 1 MIAFIKGIIHSYSNDSLIIENNGIGYRIYISNPQSVRL---NSEVILYTYQHVREDAITL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E LF +LI GVGPK ALA+L+ +Q + A+E +V L LPGIG K+ Sbjct: 58 FGFTTMEEHDLFLQLISVKGVGPKTALAMLAVCPVKQMIEAIEHNDVKLLKSLPGIGAKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + + S + +A+ AL ALGYK E + + Sbjct: 118 ASQIVLDLKGKL-------------VEEVSEIQVKENAELVDAIEALKALGYKNAEINSI 164 Query: 181 VSKIARPD-ASSETLIREAL 199 +++ A+S+ IR+AL Sbjct: 165 KKELSEESFATSDQYIRKAL 184 >UniRef50_A5CEJ4 Holliday junction ATP-dependent DNA helicase ruvA n=17 Tax=Rickettsieae RepID=RUVA_ORITB Length = 205 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI +L+GI+ ++I++ GVGY+V+ +L E G +F VRED Sbjct: 1 MIAKLKGILDSITDSYLIIDINGVGYQVYSSGKTLMKLIKEEGSIVSLFIETHVREDRIH 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + E+ F L +G+G K+AL ILS ++ Q A+ + L + G+G K Sbjct: 61 LFGFLDNTEKVAFNMLQSVSGIGTKMALHILSNLTPHQLQIAISSQNRHQLKAISGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +RL++E++D+ + + L + S S D+ +A+ AL+ALG EA++ Sbjct: 121 LIDRLMIELRDKVANI--NTIANNTSLAILSTDSNTHDNILSDAITALIALGISRAEATQ 178 Query: 180 MVSKIAR--PDASSETLIREALR 200 ++S I P S L+R AL+ Sbjct: 179 ILSDIYALFPSISVNELVRTALQ 201 >UniRef50_B1W3G3 Holliday junction ATP-dependent DNA helicase ruvA n=16 Tax=Actinomycetales RepID=RUVA_STRGG Length = 208 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 16/209 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + P +IEVGG+G V +L G+EA + T VVRED+ L Sbjct: 1 MIAFVSGPVAALAPTTAVIEVGGIGMAVQCTPHTLADL-RVGREARLATSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF N ER +F+ L +GVGP+LA A+L+ S AV + AL + GIGKK Sbjct: 60 YGFANDDERQVFELLQTASGVGPRLAQAMLATHSPDALRLAVSTGDEKALTAVSGIGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++L++E+KDR G A + +P T + AAL+ LGY +EA Sbjct: 120 AQKLLLELKDRLGEPVG------AHIGQQGIGTPVTSGWRDQLQAALIGLGYASREADEA 173 Query: 181 VSKIA---------RPDASSETLIREALR 200 V+ +A L+R AL+ Sbjct: 174 VNAVAPQAEAAVAEGTAPPVPQLLRAALQ 202 >UniRef50_Q4JVD8 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Corynebacterium RepID=RUVA_CORJK Length = 211 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 100/208 (48%), Gaps = 10/208 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +I+K V IE GVGY+ T ELP G+E V T VVRED+Q L Sbjct: 1 MIASLRGTVIDKGLDYVTIECAGVGYQCSGTATTIAELPR-GEEVFVTTALVVREDSQTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F + E+ F L +GVG +LALAILS ++ Q+ AV + L + PG+GK+ Sbjct: 60 YVFKDADEKRAFATLQSVSGVGARLALAILSVITPQELARAVSNGDHKTLQRAPGVGKRL 119 Query: 121 AERLIVEMKDRFKGL----HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 AER+ V++K + L A + D ++ + ALV LG+ + Sbjct: 120 AERMAVDLKGKVADLGEIADTGAVGAAGAVGDGGDGQAVAPDVREQVLEALVGLGFTESK 179 Query: 177 ASRMVSKIAR-----PDASSETLIREAL 199 A + + + L+R +L Sbjct: 180 AGTTIEAVLSQWSAPQAPDASGLLRASL 207 >UniRef50_C8W783 Holliday junction DNA helicase RuvA n=2 Tax=Atopobium RepID=C8W783_ATOPD Length = 210 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 4/204 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE-AIVFTHFVVREDAQL 59 MI +L G ++ P + +++V GVGYE+ + + LP+AG+ V T VVRED+ Sbjct: 1 MIVQLTGTLVSVTPSVAVLDVNGVGYELGISASTAAALPQAGEAGVTVLTRMVVREDSME 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF +++ER LF L +GVGPKLAL++LS + QQ V + L + G+GKK Sbjct: 61 LFGFASREERALFDRLRAISGVGPKLALSVLSTFTPQQLAVIVATNDGNRLKSVSGLGKK 120 Query: 120 TAERLIVEMKDRFKGLH--GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AERLI+E+ D F L + S P E EA+ AL+ +G+ QEA Sbjct: 121 KAERLIIELSDVFAKDTELKQLVGLTSPTDFASIPKPTVTSVESEAIEALLGMGFTSQEA 180 Query: 178 SRMVSKIARPDA-SSETLIREALR 200 + + A + E I ALR Sbjct: 181 TLALEGYEEVGAITIEAAIGYALR 204 >UniRef50_B6YR38 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=RUVA_AZOPC Length = 196 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 113/203 (55%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I+E P V+IE G +GY + + + ++ L + + ++ + V+RE+ L Sbjct: 1 MLDFIKGEIVELIPDSVIIETGNIGYMLFISLNTYFSLTKI-KSCKLYIYEVIREETHQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K+ER LF LI GVG +A +LS +S + + V AL L GIG KT Sbjct: 60 FGFIDKKERQLFTHLISVPGVGANIARMVLSSLSVCELEEIIFSGNVSALQALKGIGNKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+++KD+ K P + + + + +EA+ AL+ LG+ + ++ Sbjct: 120 AERIIIDLKDKVK--------PDNIPSSDTIITNISSNITKEAITALITLGFSQSASQKV 171 Query: 181 VSKIARPDASS---ETLIREALR 200 V+KI ++SS E +I++AL+ Sbjct: 172 VNKIVSNNSSSTTIEQIIKKALK 194 >UniRef50_D2RLD5 Holliday junction DNA helicase RuvA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLD5_ACIFE Length = 204 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 4/201 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG + G + L++ GVGY + + + + Q+ ++T+ VREDA L Sbjct: 1 MIGFITGRVDHIGTNFCLVDTQGVGYRIFLNTGDLSRI-QVDQKVKIYTYLSVREDALQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +LF +LI +G+GPK+A ILS F AV+ ++ L KLPGIGKKT Sbjct: 60 FGFLSYDAYSLFTQLITVSGIGPKVAQGILSAAKVDAFYLAVKSRDLKFLTKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+KD + A P T L LGY E +++ Sbjct: 120 AERLLLELKDMTGPEGLEEEGTAGGFDGDVPEDDTTTLGA--VAEGLSYLGYTQGEIAQV 177 Query: 181 VSKIA-RPDASSETLIREALR 200 + K+ D+ +E L++EALR Sbjct: 178 LKKLKVTADSRAEDLLKEALR 198 >UniRef50_B6XV05 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XV05_9BIFI Length = 210 Score = 192 bits (488), Expect = 8e-48, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + +IEVGGVGYE MP + AGQ V+T V +DA L Sbjct: 6 MIGMLHGQVDSIDAASAIIEVGGVGYETRMPSADLASM-HAGQTVKVYTSLNVSQDAITL 64 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + +F +L K +G+GPK+AL++LS + ++ AV + AL K PG+GKK Sbjct: 65 YGFSSLASKRMFLQLQKVSGIGPKVALSLLSTLPPERLARAVADGDATALAKAPGLGKKG 124 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+K + +P D ++ V L++LG++ Q+A Sbjct: 125 AQKIILELKGSIDLSQIEGASPE--------TRSTEDTGSEQVVEGLMSLGWRQQDAVHA 176 Query: 181 VSKIARP--------DASSETLIREAL 199 V ++ D ++R AL Sbjct: 177 VQEVCESNHIDIPLGDDDVPRVLRLAL 203 >UniRef50_Q0ALX8 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Alphaproteobacteria RepID=RUVA_MARMM Length = 213 Score = 191 bits (487), Expect = 8e-48, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 99/211 (46%), Gaps = 13/211 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + ++++V GVGY V L E Q+ ++ VREDA L Sbjct: 1 MIGMLTGRVAALGADELVLDVSGVGYLVGAGARTLSRL-EPDQDIVLHIETHVREDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +R F L GVG K A AIL + + NA + + G+G K Sbjct: 60 YGFLDDIDRAWFVHLQNIQGVGAKAAFAILDTVPVSEIANAAALGDKSTFARAKGVGPKL 119 Query: 121 AERLIVEMKDRFKGLH-----GDLFTPAADLVLTSPASPATDD--AEQEAVAALVALGYK 173 A R+ E+KD+ G +P +PA D A ++AV+ALV LGY Sbjct: 120 ATRIATELKDKAPPTGRSFSIGLPVHSDDGTTGGAPVAPAGGDSLAREDAVSALVNLGYN 179 Query: 174 PQEASRMVSKIARPDASSE----TLIREALR 200 +A + V+KI R DA SE +IR +L+ Sbjct: 180 ESQARQAVAKILR-DADSEAPLGDVIRLSLK 209 >UniRef50_B0VHI7 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHI7_9BACT Length = 202 Score = 191 bits (487), Expect = 9e-48, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + K P L +IE G+G+E+ +P++ + +LP AG+ + T+ + +D + Sbjct: 4 MIQYISGTLTFKTPVLAIIETMGIGWELKIPISTYEKLPTAGKPCKLLTYLHISQDDIRI 63 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER LF L K G+GPK+AL+ILS +S F+ AV E G L ++PGIGKK+ Sbjct: 64 FGFATEAERELFVMLNKVGGIGPKIALSILSTLSIPTFIKAVNSGEEGLLTRVPGIGKKS 123 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR- 179 A+RLIVE+KD L + + D E +AL++LG+ + + Sbjct: 124 AQRLIVELKDDVHKLLNHIDQKELQI----------GDVSSEVESALLSLGFNLHQIRKE 173 Query: 180 -MVSKIARPDASSETLIREALR 200 + + ++E LI+E ++ Sbjct: 174 LALMDESMQKLNTEELIKEIIK 195 >UniRef50_B7K970 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Cyanothece RepID=RUVA_CYAP7 Length = 209 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 12/210 (5%) Query: 1 MIGRLRGIIIEK-----QPPLVLIEVGGVGYEVHMPMTCFYELP-EAGQEAIVFTHFVVR 54 MI L+G + ++++EV +GYE+ +P L E Q +FTH +R Sbjct: 1 MINYLKGKTTQILKTPSNRNILILEVNHIGYEIQIPSRLARNLSLEEDQIVQIFTHLQIR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 ED Q+LYGF+ ER LF++LI NGVG + A+A++ + + +NA+ +V L K P Sbjct: 61 EDQQILYGFSTDSERDLFRQLININGVGTQTAIALIDTLGIEALINAIVTNDVKTLSKTP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+G KTAER+ +E+K + A L + + +E L+ALGY Sbjct: 121 GVGPKTAERIALELKSKLSQWEQ-----AIALKTPVSVGVPSREILEEVEMTLLALGYTD 175 Query: 175 QEASRMVSKIARPDASSETL-IREALRAAL 203 +E + +S I++ + + + E L++A+ Sbjct: 176 EEIDQAISAISQDNLLLKNPHVEEWLKSAI 205 >UniRef50_A8LHP9 Holliday junction ATP-dependent DNA helicase ruvA n=32 Tax=Alphaproteobacteria RepID=RUVA_DINSH Length = 224 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 105/218 (48%), Gaps = 18/218 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G+++ + ++++V GVGY V +P G +FT +VRED L Sbjct: 1 MIGRLSGVLVYRGRDHIVLDVRGVGYVVQCSERTLAGMPAPGGPVALFTELLVREDLLQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E+ + L GVG K +++ILS + A+ + GAL K G+G K Sbjct: 61 YGFPTLLEKEWHRLLTSVQGVGAKASMSILSTLGVDGVGRAIALGDWGALRKAQGVGPKI 120 Query: 121 AERLIVEMKDR--------------FKGLHGDLFTPAADLVLTSPASPATDDAEQE---A 163 A+R++ E+KD+ G+ D + + S A PA A + A Sbjct: 121 AQRVVNELKDKGPEVMAMGGTLEAALDGVIEDGMAASEGIEPPSAARPAVPSAASDQAGA 180 Query: 164 VAALVALGYKPQEASRMVSKIARPDASSE-TLIREALR 200 ++ALV LGY EA+ V+ A A E +IR ALR Sbjct: 181 LSALVNLGYGQGEAASAVATAAGEGAVGETDIIRAALR 218 >UniRef50_UPI000196B988 hypothetical protein CATMIT_00479 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B988 Length = 204 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++GII ++I+ G+GYEVH+ ++ G +A V+ + V+ED L Sbjct: 19 MYSYIKGIIAGLYSDHIVIDNHGIGYEVHVSNPYNFK---KGDDATVYIYQQVKEDDLTL 75 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E+ LF++LI G+G K A+ IL+ ++A+E + + L K+PGIG K Sbjct: 76 FGFKKKEEKELFQKLILVKGIGCKTAIGILATGEIDAIIDAIEGKNIAYLKKIPGIGPKA 135 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++ +F P +EA L+ALGYK + + Sbjct: 136 AQQIILDLHGKFDKRAMK---------------PLGSPDYEEATEVLIALGYKQSDVEKA 180 Query: 181 VSKIARPDASSETLIREAL 199 + ++ + + ++ AL Sbjct: 181 MKVLSSENLDTNGYVKRAL 199 >UniRef50_Q1AWE1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RUVA_RUBXD Length = 196 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 112/200 (56%), Gaps = 10/200 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RLRG ++EK P V+++ GGVGY P++ LP G+E +V T VVREDA LL Sbjct: 1 MIDRLRGQLVEKDPEGVVVDCGGVGYRAAAPLSTLRALPAVGEECVVHTRMVVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ER F L + VGP+LALA+LS M+ Q + A R +V +PG+G+KT Sbjct: 61 FGFATREEREAFDALTSVSKVGPRLALAVLSAMTPGQMMEAAARGDVHRFAAVPGLGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++ R AA A+ D EA AL LGY +EA R Sbjct: 121 AERLVLELRGR---------ELAAAGGGGGVAAGEGDGPFMEAREALTGLGYSLEEAERA 171 Query: 181 VSKIARPDASSETLIREALR 200 + + P + E I+ ALR Sbjct: 172 LRDVP-PQETVEQYIKAALR 190 >UniRef50_B8J094 Holliday junction DNA helicase RuvA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J094_DESDA Length = 204 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 7/193 (3%) Query: 1 MIGRLRGIIIEKQ-PPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI L G + E +LI GVGY V +P LP G+ ++T VREDA Sbjct: 1 MIAYLEGRLAETWGNTCLLITENGVGYAVALPAHTLSVLPGRGEHLALYTSLAVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF +ER F+ LI + VG + AL+ILS + V E+V AL ++ GIGKK Sbjct: 61 LFGFATFEERQTFEVLISISKVGARTALSILSIYRPEDLRRIVFEEDVMALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K + + ++ + L LGY E + Sbjct: 121 TAQHVFLELKYKLK------VDDVPQAAVLASTGERPGSVFRDVLDGLANLGYAEDECAP 174 Query: 180 MVSKIARPDASSE 192 MV K+ + + Sbjct: 175 MVKKLLHEEPDLD 187 >UniRef50_C1D1T9 Putative Holliday junction ATP-dependent DNA helicase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1T9_DEIDV Length = 202 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 8/200 (4%) Query: 2 IGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY 61 I L G++ E + +I GGVGYEV P +L GQ A + T FVVREDAQLL+ Sbjct: 5 IAYLSGVVREVRENSAVIVAGGVGYEVQCPAGTLGKLV-VGQNAELSTRFVVREDAQLLF 63 Query: 62 GFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTA 121 GF++ LF + +GVGPKL L++LS M + +V L + G+GKKTA Sbjct: 64 GFSDADSLKLFDLVTGVSGVGPKLGLSLLSAMPVSALAQGLMAGDVKLLSSVSGVGKKTA 123 Query: 122 ERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMV 181 ERL++E++++ PA + A+P + A ++A+ AL+ALG++ + +V Sbjct: 124 ERLVLELQNKVPEHLAAAGVPAG-----TRATPVSSTAGRDAIEALLALGFREAQVRGVV 178 Query: 182 SKIARPD--ASSETLIREAL 199 +++ D S++ LIR+ L Sbjct: 179 AELLGADPTQSADALIRKGL 198 >UniRef50_B8DNJ8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfovibrio RepID=RUVA_DESVM Length = 202 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 8/193 (4%) Query: 1 MIGRLRGIIIEKQPP-LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G + E V++ GGVGYEVH+P LPE G + VREDA Sbjct: 1 MIAYVEGRVAEISGNACVVVTEGGVGYEVHLPAHTLSRLPERGGQVAFHVRTEVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF+ ER F L + VG + ALAILS V ++V AL ++ GIGKK Sbjct: 61 LFGFSTWDERQTFMVLTTISKVGARTALAILSQFRPDDLRRLVVEDDVLALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K + A LVL A+P ++A+A L LGY EA+ Sbjct: 121 TAQHIFLELKYKLK-----VEDLPAGLVLAGGAAP--GGVFRDALAGLGNLGYLEDEAAP 173 Query: 180 MVSKIARPDASSE 192 ++ ++ + + + Sbjct: 174 VLKEVLKAEPDLD 186 >UniRef50_B8ZUI1 Holliday junction ATP-dependent DNA helicase ruvA n=12 Tax=Mycobacterium RepID=RUVA_MYCLB Length = 203 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG ++E +IE G+GY V+ + L + G +A + T VVRED+ L Sbjct: 1 MIFSVRGEVLEVALDHAVIEAAGIGYRVNATPSALATLRQ-GSQARLVTAMVVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + R LF L+ +GVGP+LA+A L+ A A+ +V +L ++PGIGK+ Sbjct: 60 YGFSDAENRDLFLALLSVSGVGPRLAMATLAVHDAAALRQALADSDVASLTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E++D+ P LT + + V ALV LG+ ++A Sbjct: 120 AERIVLELRDKVG--------PVGASGLTVGTAADGNAVRGSVVEALVGLGFAAKQAEEA 171 Query: 181 VSKIARPDASSETLIRE--ALRAAL 203 ++ + + + ALRAAL Sbjct: 172 TDQVLDGELGKDGAVATSSALRAAL 196 >UniRef50_Q729U3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Desulfovibrionaceae RepID=RUVA_DESVH Length = 202 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 88/193 (45%), Gaps = 8/193 (4%) Query: 1 MIGRLRGIIIEK-QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G + E V++ GGVGYEV +P LP+ G F VREDA Sbjct: 1 MIAYVEGRLAEVAGNACVVVTDGGVGYEVFVPGHTLARLPDKGGRVSFFISTEVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF ER F L + VG K LAILS V ++V AL ++ GIGKK Sbjct: 61 LYGFATWDERQTFIVLTSISKVGAKTGLAILSQFRPDDLRRLVVEDDVLALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K P A ++A+A L LGY +EAS Sbjct: 121 TAQHIFLELKYKLKVEDLPAAAPLV-------TGGAPGGVFRDALAGLANLGYGEEEASH 173 Query: 180 MVSKIARPDASSE 192 ++ + + + Sbjct: 174 VLKDVLHGEPDLD 186 >UniRef50_C0W1Q3 Possible crossover junction endodeoxyribonuclease n=2 Tax=Actinomyces RepID=C0W1Q3_9ACTO Length = 195 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 12/199 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +G + +P +++ GG G + + + ++ G+ ++T +VRED+ L Sbjct: 1 MISFFQGEVQAIKPGHLVLVNGGFGLSIQVTVGTANQVRH-GELVGLYTSLIVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F L + +GP+ AL L ++ + AV + L ++PGIGKK+ Sbjct: 60 YGFLTEDERDTFNVLQTVSKIGPRTALQALEALTPDELRQAVISSDEKTLQRIPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+ D+ TP ++ L + S A E E +A LV+LGY A Sbjct: 120 AQRMLIEIGDKLG-------TPTGNVKLGTTVSVA----ETEVIAGLVSLGYSEVSAQAA 168 Query: 181 VSKIARPDASSETLIREAL 199 V D ++ ++R AL Sbjct: 169 VEPFQGSDMNTSEMLRAAL 187 >UniRef50_Q2FPZ9 Holliday junction DNA helicase RuvA n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FPZ9_METHJ Length = 195 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 115/201 (57%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG++I + V++E GG+GY + +P + + + E I++T ++R+D L Sbjct: 1 MIARIRGLVIGYETGSVIVEAGGIGYRIRVPESVLTSITK-DDEIILYTELIIRQDLMQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E +F+ LI + +GP+ LAI+S +S + +A+ ++ L ++ G+GKK Sbjct: 60 YGFYTPEETEMFRLLISVSHIGPQTGLAIISRLSLPEICDAISSKKPEILSQVQGLGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E++ + ++L + P +P + Q+AV AL++LGY +EA Sbjct: 120 AERIILELQKKV-----------SELKIQYPQTPTSSTKIQDAVLALLSLGYSREEAMGA 168 Query: 181 V--SKIARPDASSETLIREAL 199 + S + SS L+REAL Sbjct: 169 LERSALDTETVSSSELVREAL 189 >UniRef50_A5GTL6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Synechococcus sp. RCC307 RepID=RUVA_SYNR3 Length = 208 Score = 189 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 11/207 (5%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L G I ++ +L+ G VGYE+ + + + V TH RED Sbjct: 1 MIGWLHGTIGDRWQEGNRCWLLLICGPVGYELQVSESLWRG-TALESPTTVHTHLQQRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 Q LYGF K +R LF+ LI NGVGP++AL ++SG+ A + A+ E+V L + PG+ Sbjct: 60 GQQLYGFETKADRNLFRLLISVNGVGPQVALGLISGLGAVSLLQAMAAEDVKVLCQAPGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL +E + R + + L L P + + +E A L ALGY P+E Sbjct: 120 GKRTAERLSLEWRSRLQE-RWQQQGGSTPLRLVEPVAES-----RELRATLEALGYGPEE 173 Query: 177 ASRMVSKIARPDASSETLIREALRAAL 203 S V++ E + E LR L Sbjct: 174 VSAAVAQAGSQGLDPEQPMEEWLRHCL 200 >UniRef50_A0LUK6 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Actinomycetales RepID=RUVA_ACIC1 Length = 196 Score = 189 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + P V++EVGG G ++ G+ A T VVRED+ L Sbjct: 1 MISFVSGRVAAVTPDSVIVEVGGFGVQLLATPATIAR-ARVGERARFATSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ERT+F+ L +GVGP+LALA+L S AV E+V AL +PGIG+KT Sbjct: 60 YGFADDDERTVFELLQTASGVGPRLALAMLGVHSPTALRAAVATEDVKALALVPGIGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KDR ++ A+ +T A L+ LGY ++A Sbjct: 120 AQRIILELKDRLG-------------TPSTAAAESTSGWRDAVHAGLLNLGYTARQADEA 166 Query: 181 VSKIARP-DASSETLIREALRAAL 203 ++ IA D S+ ALR AL Sbjct: 167 IAAIAGELDDSAAVDTATALRLAL 190 >UniRef50_Q252Y0 Holliday junction ATP-dependent DNA helicase ruvA n=14 Tax=Chlamydiaceae RepID=RUVA_CHLFF Length = 207 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 M +RGI+ ++IE G+G+ + EL +E IV+T+ VVRE + Sbjct: 1 MYDYIRGILTYMSSGTMVIECQGLGFSICASDRWLMELAGLLHREVIVYTYTVVRETEHV 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF ++ ER F+ LI +GVGPK LAIL+ + + + E+V AL +PGIGKK Sbjct: 61 LYGFRSRGERECFRMLISFSGVGPKTGLAILNTFALSKLCSIARAEDVKALASVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAE+L+V++K + L D + PA ++ + AL ALGY A R Sbjct: 121 TAEKLMVDLKQKLPELL------PLDSQTLTSWKPAKPSCMEDGIQALAALGYPKSSAER 174 Query: 180 MVSKIARP---DASSETLIREALRAAL 203 M+++ +AS ++ AL+ L Sbjct: 175 MIAEAITELPDNASLAEILPIALKKNL 201 >UniRef50_D1C4E7 Holliday junction DNA helicase RuvA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4E7_SPHTD Length = 193 Score = 188 bits (479), Expect = 7e-47, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG I K P +VLI++ G+ V T +L E G A ++TH VRED L Sbjct: 1 MISGVRGPIHAKYPGIVLIDLHGLIIRVLTSQTTVDDLGEVGDHAELYTHLRVREDDITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E LF+ L GVGP++AL ILS ++ +E E++ AL ++PGIGKKT Sbjct: 61 YGFSTPEELQLFELLTSVTGVGPRVALNILSSARPEEVHRVIESEDIAALSRVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E++ + G A + + +ALGY EA Sbjct: 121 ASRIILELRGKLPAPAGAQAPALAAADAEAMEAL-------------MALGYTAPEARDA 167 Query: 181 VSKIAR-PDASSETLIREALR 200 +++I R + E + AL+ Sbjct: 168 LARIERHEGQTVEERVYAALQ 188 >UniRef50_A9GQJ8 Holliday junction DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQJ8_SORC5 Length = 244 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 18/209 (8%) Query: 2 IGRLRGIIIEKQ-PPLVLIEVGGVGYEVHMP------MTCFYELPEAGQE-AIVFTHFVV 53 IGRL G ++E+ V+++V GVGYEV +P +AG + +F H V Sbjct: 38 IGRLSGHVVEEGDEGTVVLDVSGVGYEVTVPLGAVGRARGIAANAKAGSDAITLFVHTHV 97 Query: 54 REDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKL 113 REDA LLYGF +++R F+ LI + +GPK+A+AILS + A + + R E L + Sbjct: 98 REDALLLYGFATREDRAAFRVLIGISSIGPKIAMAILSALGAGELAAVITRRETARLTAI 157 Query: 114 PGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAV-AALVALGY 172 PG+GKKTAERL++E+KD+ L +PAA P A+Q+ + +AL +GY Sbjct: 158 PGVGKKTAERLVLELKDKLVHLPAAPLSPAASP-------PVATGAKQDLLHSALTRMGY 210 Query: 173 KPQEASRMVSKIAR--PDASSETLIREAL 199 +P EA R V+ + A L+R+AL Sbjct: 211 RPAEAERAVTALGARVDSAPLGDLVRDAL 239 >UniRef50_A5EXH7 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RUVA_DICNV Length = 204 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 119/201 (59%), Gaps = 9/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G ++ KQ +LI V GVGYE+ +P + + G+E VF H V RED Q L Sbjct: 1 MIGWLQGRVLYKQNDQLLINVCGVGYELTVPQSVMAS-AQVGEELTVFVHHVQREDGQFL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ +R LF+ELI+ +G+GPKL++ ILSG++ + + AV +E ++L GIGKKT Sbjct: 60 YGFSSFLQRQLFRELIRVSGIGPKLSIVILSGLTPEALIAAVRAQESAPFLRLSGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+ DR + L + S +P A +EA+ AL+AL P EA Sbjct: 120 AERLLIELHDRVEKNDLFLCDES-----ESSRAPIALSASEEAIQALIALELAPAEAELW 174 Query: 181 VSKIAR---PDASSETLIREA 198 V K + DA S LI+ A Sbjct: 175 VKKAQKTLAEDADSAALIKTA 195 >UniRef50_A8SLR3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLR3_9FIRM Length = 200 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 98/200 (49%), Gaps = 2/200 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + ++I+ GG+GY++ + + G ++T ++V+ED L Sbjct: 1 MYEYISGELKFIYNDYIVIDNGGIGYKIFTSNNTLFNV-TVGDYYTIYTDYIVKEDYVAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF E ++FK L+ N +GPK+A ILS MS + + AL G+GKKT Sbjct: 60 FGFKTMDELSMFKLLVSVNSIGPKVACGILSSMSVDSLKLTIVNGDAVALATAKGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+KD+ + + + ++ S + + AL+ LG+ + R Sbjct: 120 AQKIILELKDKIS-IDSISSKDISGMEASTLDSGKDLEKRELVSDALINLGFMKNDIERF 178 Query: 181 VSKIARPDASSETLIREALR 200 +S I + E +I+ +++ Sbjct: 179 LSSINIDEMEIEDIIKLSMK 198 >UniRef50_D0LZE6 Holliday junction DNA helicase RuvA n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZE6_HALO1 Length = 210 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 6/208 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG ++E++ +V++E GGVGYEV + + LP G+ + E L Sbjct: 1 MIGRLRGTLVEQEGSMVIVECGGVGYEVTVSIHTLQSLPAEGEPVTLRIFTHALESRVAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMS-AQQFVNAVEREEVGALVKLPGIGKK 119 YGF + ER LF LI VGP A+ ILS S + + E +L +L G+GKK Sbjct: 61 YGFGSTLERDLFDLLITVKKVGPSSAVGILSAGSGPAEIAEMIANGETSSLTRLRGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE----QEAVAALVALGYKPQ 175 TAE L+VE++++ + L +PA+ A + E AL+ LG++ Q Sbjct: 121 TAEMLVVELREKCELLLATHRVQGGRAAARAPAAAARPSSRGPLLDEVAQALLQLGWRQQ 180 Query: 176 EASRMVSKIA-RPDASSETLIREALRAA 202 ++VS++A + S E+L+R+ALRA Sbjct: 181 SVDQVVSELAPTAEDSLESLLRQALRAM 208 >UniRef50_D0GJ52 Holliday junction DNA helicase RuvA n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GJ52_9FUSO Length = 213 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 9/209 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y++ + + F L E GQ+ ++ H V+ED Sbjct: 1 MFEYIFGELTVKKIDYVALDINGLAYKIFISLKTFEALGETGQDEKLYVHTHVKEDDISF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI T+GVGPKL LAILS + + +N V K+PG+G K Sbjct: 61 YGFKTENERELFKALISTSGVGPKLGLAILSTYNVKDVINIVIESNSKLFTKVPGLGDKK 120 Query: 121 AERLIVEMKDRFKGL------HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 A+++I+++KD+ K L + + + +++ ++ +++ AL +LGY Sbjct: 121 AQKIILDLKDKVKKLNIIETYNENGEISKGNPIVSDTSNTKILLMKEDIKLALESLGYLN 180 Query: 175 QEASRMVSKIARPDASSETLIREALRAAL 203 + S+ + + S I EA+++ L Sbjct: 181 ADVSKWIK---DEELSQINDIGEAIKSIL 206 >UniRef50_Q30R94 Holliday junction ATP-dependent DNA helicase ruvA n=19 Tax=Campylobacterales RepID=RUVA_SULDN Length = 188 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 113/200 (56%), Gaps = 17/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG+++ K+P V ++VGGV YEV + + F L G E +FT V+REDAQLL Sbjct: 1 MIVGVRGVLVSKEPSFVHVDVGGVVYEVFISLQSFSALS--GNEVKLFTSHVIREDAQLL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E+ LF+ LIK NGVGPK+A+AI S + QF + +++ A+ ++PGIG K+ Sbjct: 59 YGFLELGEKKLFERLIKINGVGPKVAMAICSTYTPSQFAVVLNNKDITAVQRVPGIGPKS 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE+ D L AS A +A AL +LG+K + S+ Sbjct: 119 AGRILVELSG-------------FDTELIISASEPKSLAVAQASEALESLGFKKDKISKA 165 Query: 181 VSKIARPDASSETLIREALR 200 + + + L++EAL+ Sbjct: 166 LGSCSA--VDTAILVKEALK 183 >UniRef50_B5YKF0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RUVA_THEYD Length = 190 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G +I +P ++I+ GG+GY V +P+ +E +FT +V+E++ + Sbjct: 1 MLDFIKGKVITVKPDKIVIQTGGIGYSVKIPIRV-SRYINRDEETQIFTSLIVKEESIEI 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ER LF+ELIK G+GPK+A+ ILS + ++ E++ +L K+PGIGKKT Sbjct: 60 YGFLESSERDLFEELIKIAGIGPKMAINILSTYDRETLYKIIDHEDIKSLSKIPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E++ L + D + ++AL+ LGYK EA + Sbjct: 120 AQRILLELRGILPSLQYE-----------------KDQKYDDILSALLNLGYKRLEAKEV 162 Query: 181 VSKIARPDASSETLIREAL 199 + KI + T+IRE+L Sbjct: 163 LDKIYNNEKDEATIIRESL 181 >UniRef50_A5UZS3 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Chloroflexi (class) RepID=RUVA_ROSS1 Length = 197 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 10/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGI+I V++E GG+G+ ++ P L + G +FT+ +VRED+ L Sbjct: 1 MIASIRGILIAVAADHVVVETGGIGWMIYAPRPVIAALGDIGATVRLFTYLLVREDSLTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++R LF+ L+ GVGP+ AL +LS + + A+ +V L + P IGKK Sbjct: 61 YGFETVEQRQLFETLLSVTGVGPQAALNLLSSGTTDELRLAIATGDVTRLARTPRIGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+K + L + +PA A E AL++LG+ EA+ Sbjct: 121 AERLVLELKGKI---------NVKGLPTGAAVTPAVAAANAELSEALISLGFTDAEAAAA 171 Query: 181 VSKIARPD-ASSETLIREALR 200 ++ + E +R ALR Sbjct: 172 IAALPSDAPPDLEERVRLALR 192 >UniRef50_Q1D2J5 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Cystobacterineae RepID=RUVA_MYXXD Length = 202 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 84/204 (41%), Positives = 115/204 (56%), Gaps = 10/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RLRG ++EK I+VGGVGY V+ +LP GQ V VVREDA L Sbjct: 1 MISRLRGTVLEKDLEDATIDVGGVGYRVNFSSLALGKLPAEGQPVDVRVRTVVREDAFDL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E +F L + VGP+L+L +LSGM + V A+ R EV L K+ G+GKKT Sbjct: 61 FGFLTKGEEEVFLLLNSVSRVGPRLSLMVLSGMEVPELVAALSRGEVARLAKIHGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+KD+ K +H + V A A A + V+AL+ LGYK +A + Sbjct: 121 AERLVLELKDKVKTIHLEA-------VSRGTAPAAVSGAHADLVSALLNLGYKQPQAEKA 173 Query: 181 ---VSKIARPDASSETLIREALRA 201 S+ +A+ + L REAL+A Sbjct: 174 ADLASERLGAEATFQALFREALKA 197 >UniRef50_B1C6M7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6M7_9FIRM Length = 199 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 9/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 M ++G + + + + IE GVG+ +++ +L ++ V+T+ VRE+ Sbjct: 1 MFDYIKGDVTDIREGYLTIENKSGVGFLLNVSENTATDLINDREDVKVYTYMAVRENDVS 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF+ ER +F +L+ +GPK+AL+ILS +S V A+ ++ +L G+GKK Sbjct: 61 LFGFSTLFEREIFFKLLTVPKIGPKIALSILSALSPNMIVAAIMNKDYKSLCTANGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AE+++V ++D+F L D+ +D + EA+ L +LG+ A++ Sbjct: 121 AAEQIVVTLQDKFGDLPEIEEITVNDM-------NINNDLKDEAILGLTSLGFDRAYAAK 173 Query: 180 MVSKIA-RPDASSETLIREALRAA 202 +V +I+ D + E ++ AL+ Sbjct: 174 IVREISVDDDLTIEDILSLALQKV 197 >UniRef50_C0QZY1 Holliday junction DNA helicase RuvA n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QZY1_BRAHW Length = 192 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + ++ + GVGYE+ + + ++T + REDA +L Sbjct: 1 MFAFIEGKVQIISEGVIALLCNGVGYEIIVSKKLD---VKNDDNIRLYTKLIHREDAMIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ +F L+ +GVGPKLA+ +LS S ++ + +++ L K+ G+G K Sbjct: 58 YGFLTREEKNMFTTLMSASGVGPKLAMEVLSTYSINDLMHILFNKDINLLKKVSGMGVKK 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+L+ E++D+ + + ++ S ++D E + + AL++LG+ EA + Sbjct: 118 AEKLLFELRDKIEKIDINI-----------SPSVISNDNESDVIKALISLGFSNNEAVKA 166 Query: 181 VSKIARPD-ASSETLIREALR 200 +S I D ++E LI ALR Sbjct: 167 LSAIENKDNMTTEDLISNALR 187 >UniRef50_C3RKD6 Holliday junction DNA helicase subunit RuvA n=3 Tax=Bacteria RepID=C3RKD6_9MOLU Length = 188 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 16/199 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G ++E +++E G+GY +++ Y G+E +F + V+EDA LL Sbjct: 1 MYSYLIGTVVEMNIDHIVVENSGIGYLIYVNNPYEYT---RGKEIKIFLYQQVKEDALLL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E+ +F +LI G+G K A+ IL+ ++A+E V L K+PGIG K Sbjct: 58 YGFKTSEEKEMFLKLILVKGIGCKTAIGILATGDVTSIISAIETGNVAYLKKIPGIGPKA 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I++++ +FK + + ++ EA L+ALGYK E + Sbjct: 118 AQQIILDLQGKFKNTP-------------TATTLINNNDLDEAAEVLIALGYKKSEVDKA 164 Query: 181 VSKIARPDASSETLIREAL 199 ++ + + ++ AL Sbjct: 165 LAVLLNEKLDTNGYVKRAL 183 >UniRef50_A9NF61 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Acholeplasma laidlawii PG-8A RepID=RUVA_ACHLI Length = 186 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++GI+ + P +++E GVGY V P+ Y++ G+E V T+ VRED L Sbjct: 1 MYRYIKGIVTQINPQHIVVENNGVGYLVLSPVPYQYKI---GEETTVVTYLHVREDIFQL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF +LI +G+GPK A++I++ + + A+E + L K PGIG K+ Sbjct: 58 YGFKDEETLNLFLKLISVSGIGPKSAMSIVAFDDTNKIIAAIETSDAKYLTKFPGIGMKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K + D+ D ++ AAL ALGY +E ++ Sbjct: 118 AQQIILDLKGKLVNDELDM--------------QLLSDNSKDVAAALEALGYNKKEIAKS 163 Query: 181 VSKIARPDASSETLIREAL 199 + + D ++EAL Sbjct: 164 LKHV-NFDQDLNKALKEAL 181 >UniRef50_Q1GE12 Holliday junction DNA helicase RuvA n=12 Tax=Rhodobacterales RepID=Q1GE12_SILST Length = 229 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 105/223 (47%), Gaps = 23/223 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G + K P V+I+V GVGY V+ LP G+ ++T +VRED L Sbjct: 1 MIGKLTGRLDYKTPDHVMIDVRGVGYIVYCSDRTLASLPAVGEAVQLYTELLVREDLMQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ + L GVG K++LAILS + + A+ + A+ G+G KT Sbjct: 61 FGFTSLVEKEWHRLLTSVQGVGAKVSLAILSALGPEGVSRAIALGDWAAVKAAKGVGPKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTS---------------------PASPATDDA 159 A+R+++++KD+ + T L A A Sbjct: 121 AQRIVLDLKDKAPSVMAMGGTVTEALEGPELDAVVEPAAEAPAKPARKAAPKAPTGAAAA 180 Query: 160 EQEAVAALVALGYKPQEASRMVSKIA--RPDASSETLIREALR 200 A++AL LGY P +A+ V++ A PDA LIR ALR Sbjct: 181 SAGALSALGNLGYGPSDAAGAVAEAAANNPDAGEAELIRAALR 223 >UniRef50_A3CR11 Holliday junction ATP-dependent DNA helicase ruvA n=49 Tax=Firmicutes RepID=RUVA_STRSV Length = 196 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 8/200 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +GII + +++EV +GY +H+ Y + QEA V+ H VVREDA+LL Sbjct: 1 MYEYFKGIISKITAKYIVLEVNSIGYILHVANPYAYS-GQLHQEAKVYVHQVVREDAELL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ LF LI +G+GP ALAI++ V A+E++ + L K P IGKKT Sbjct: 60 YGFATEEEKQLFLSLISVSGIGPVSALAIIAADDNAGLVQAIEQKNITYLTKFPKIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++++++++ + + +P A + +EA+ A++ALGYK E ++ Sbjct: 120 AQQMVLDLEGKV-------VAAGSPAESKAPVQTADNQELEEAMEAMLALGYKAAELKKI 172 Query: 181 VSKIARPDASSETLIREALR 200 ++E I+ AL+ Sbjct: 173 KKFFEGTTDTAENYIKSALK 192 >UniRef50_UPI000038343B COG0632: Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038343B Length = 182 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 2/166 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L+G++ V+++V GVGY VH LP+ G+ + VRED L Sbjct: 1 MIGKLKGLVDSYGEDFVILDVNGVGYVVHCSARTLQRLPKPGEATDLAIETHVREDMIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F+ L GVG ++AL +LS + + A+ + GA+ + PG+G + Sbjct: 61 YGFRSDAEREWFRLLQTVQGVGTRVALGVLSVLEPEALATAIATGDKGAIARAPGVGPRL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAA 166 A RL+ E+KD+ PA + + +A++A Sbjct: 121 AARLVAELKDKAPAFA--PIDPALVALTGAVEDRTAPQPVADAISA 164 >UniRef50_A3VP65 Holliday junction DNA helicase RuvA n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VP65_9PROT Length = 202 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 98/201 (48%), Gaps = 5/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + +I+V GVGYEV L + GQE + T +V E L Sbjct: 1 MIAALHGTVSVLSGENAIIDVNGVGYEVAATPRLLSSLAQ-GQEVRLITETLVAETYIRL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 F +ER F+ L GVG K ALAILS ++ +AVE + + + G+G K Sbjct: 60 VAFQTIEERLTFRLLQTVQGVGAKAALAILSALTPADLFDAVEAGDKAMVARAQGVGPKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++ E+K + G+ G A+ ++ A D ++AVAALVALG+ A R Sbjct: 120 ALRIVTELKGKCGGIVGAFPAVASPRATSAA---AVDSPAEDAVAALVALGFDHGAARRT 176 Query: 181 VSKIARPDAS-SETLIREALR 200 +S + + S +E LI L+ Sbjct: 177 ISTLPDLETSRTEDLITAGLK 197 >UniRef50_Q7V7T9 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Cyanobacteria RepID=RUVA_PROMM Length = 225 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 18/218 (8%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G +E V++ GVGYEV + E+ I++ H V R+D Sbjct: 1 MIGWLQGQKVEAWQQGTRQGVVLACAGVGYEVQIAPRHLSEMEHGQNTFILWIHQVQRDD 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF ++ER +F+ LI +GVGP++ALA+L + V A+ + ++ L + G+ Sbjct: 61 GSSLFGFPERRERDMFRTLIGVSGVGPQMALALLEECQTGELVEAIVQGDLRKLCQAQGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL VE++ + + + D + E L LGY+ E Sbjct: 121 GKRTAERLAVELRTKLAEFSCRDPGMSLVDNGVIDSHQLKDSSLHELQITLGGLGYEDLE 180 Query: 177 ASRMVSKIARPDA--------------SSETLIREALR 200 R + +A A ++ +R +LR Sbjct: 181 IRRAIRAVASGAAIGASDMPESVPSIDDTDAWLRASLR 218 >UniRef50_C0ABP1 Holliday junction resolvasome DNA-binding subunit-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABP1_9BACT Length = 219 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 1/154 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++ E P ++E+ G GYEV++P+T +LP G + + T + REDAQ L Sbjct: 1 MITSIQGLLTEATPLRAVVEINGFGYEVNIPVTTAEKLPAVGAKVKLHTIVIYREDAQTL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF + +ER F+ +I + +GVGPKLAL I+S MS A+ ++ +L K PGIGKK Sbjct: 61 YGFASPEERDFFRLMIEQVSGVGPKLALTIMSRMSLPVLEGAIRAGDISSLSKCPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPAS 153 TAERL+VE++ + + +S Sbjct: 121 TAERLVVELRAKVGASPAGGDAGSPVAGDGGTSS 154 >UniRef50_C1Q8J8 Holliday junction DNA helicase subunit RuvA n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q8J8_9SPIR Length = 194 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 13/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + ++ + GVGYE+ + + + ++T + +EDA +L Sbjct: 1 MFAFIEGNVQIISEGVIALVCNGVGYEIIVSKKLE---VKNDDKIRLYTQLIHKEDAMIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ +F LI +GVGPKLA+ ILS S ++ + +++ L K+ G+G K Sbjct: 58 YGFLTREEKKMFSTLIAASGVGPKLAMEILSTYSINDLMHILFNKDINLLKKVQGMGLKK 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+L+ E++D+ + + D+ ++S + +D E + + AL++LG+ EA + Sbjct: 118 AEKLLFELRDKIEKI---------DINISSSSVQNYNDNESDVIKALISLGFSNNEAVKA 168 Query: 181 VSKIARPD-ASSETLIREALR 200 +S I D S+E LI ALR Sbjct: 169 LSSIENKDNMSAEDLISNALR 189 >UniRef50_C7LZI9 Holliday junction DNA helicase RuvA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZI9_ACIFD Length = 189 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 99/200 (49%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + V+I+V GVGYEVH+ + L E ++ +VR DA L Sbjct: 1 MIGWLHGRVASAGRSPVVIDVAGVGYEVHVTAP-WATLLRRDDECELWIRTIVRADAIAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ER F LI +GVGP+LAL IL G+ + A+ E++G L + G+G KT Sbjct: 60 YGFASQAEREAFDALIGVSGVGPQLALGILGGIEGDELWTAIATEDLGRLTAIAGVGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+ K L P + V AAL LG++P E + Sbjct: 120 AKRVVLELAPTAKRLAPVTGVPMSQEVSA-------------LRAALGELGFRPGEIDAV 166 Query: 181 VSKIARPDASSETLIREALR 200 V + D E +R AL+ Sbjct: 167 VRRCPG-DLDFEAQVRWALK 185 >UniRef50_B4R9Z1 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Caulobacteraceae RepID=RUVA_PHEZH Length = 204 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE-DAQL 59 MIGRLRG++ E LI+V GVGY V LP G+E ++ V E Sbjct: 1 MIGRLRGLVAEVGEEDALIDVMGVGYVVRCGSRTLSRLPAVGEETVIHVESVFGEQTGVT 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L GVGPK ALA+L ++ + AV RE+ A+ + G+G K Sbjct: 61 LYGFLGRDERRAFVTLRTIQGVGPKAALAVLDVLAPPELAAAVAREDKAAVARANGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+R++VE+KD+ AA + P A EAVAAL+ LG +A R Sbjct: 121 LAQRIVVELKDK----PISDGPVAAFHAQATTPQPIKVSAAGEAVAALMGLGIAEPQARR 176 Query: 180 MVSKI---ARPDASSETLIREALR 200 +V +A LI+ AL+ Sbjct: 177 VVESAALRLGEEAEPPALIKAALQ 200 >UniRef50_C0YLR6 Crossover junction endonuclease RuvA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YLR6_9FLAO Length = 194 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 109/202 (53%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+GI+ E P +I V GVGY V + + L Q+ +F ++REDA LL Sbjct: 1 MIFSLQGIVQELTPTYAVINVQGVGYYVGISLMTSQTLV-LNQQTFLFIQQIIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GFN + E+ +F LI NGVG AL +LS +S + +A+ + K GIG KT Sbjct: 60 FGFNTRSEKEMFNLLISVNGVGAVSALILLSTLSLDEIASAILSGNSALIQKAKGIGAKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+IV++KD+ + P A++ + + ++E+++AL LG + + ++ Sbjct: 120 AERIIVDLKDKVQKYS----DPNANISVM-----VDNKIKEESLSALEVLGIPKRTSEKI 170 Query: 181 VSKIAR--PDASSETLIREALR 200 KI + P S E L+++ L+ Sbjct: 171 ADKIIKQNPSISVEELVKQILK 192 >UniRef50_C2BWM5 Holliday junction DNA helicase motor protein n=3 Tax=Mobiluncus RepID=C2BWM5_9ACTO Length = 194 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 13/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ K+ + VGG+G E L G A V T+ VVRED+ L Sbjct: 1 MISVIKGEVVSKKLDRATVLVGGLGLEFLATPNTLATLV-PGTTATVQTYLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F L++ G+GPKL LA LS +S + AV +V AL +PG+GKK+ Sbjct: 60 YGFASPSERDTFATLMQVKGIGPKLGLAALSVLSPEALAAAVANSDVAALQGIPGVGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+ D+ G+ G + A + V AL LGY A+ Sbjct: 120 AERMILEIGDKLGGVSGVAASTGATAGFNAST----------VVEALSNLGYNQALATEA 169 Query: 181 VSKIARPDASSETLIREALR 200 V+ ++ DA + +REAL+ Sbjct: 170 VNAVSASDAPTA--LREALK 187 >UniRef50_C8NZK0 Holliday junction DNA helicase RuvA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZK0_ERYRH Length = 195 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 107/201 (53%), Gaps = 16/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G+ +++ V+++ G+GY+V E+ + I T+ VREDA +L Sbjct: 1 MIAFISGVAVDRGIDYVVVDNHGIGYQVFCGNP---EMVTLNESIIFHTYQHVREDAIIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E +F++LI GVGPK + ILS S V A+++E++ L KLPG+G K Sbjct: 58 FGFVEKRELDIFRQLITVKGVGPKTGITILSRFSGDDIVRAIDQEDMAFLKKLPGVGPKM 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K +F T A ++ EA+ AL LG+K E + + Sbjct: 118 ASQMMLDLKGKFIASDTPSTTKKALPLV------------DEALDALGDLGFKKVELNNI 165 Query: 181 VSKIARPDA-SSETLIREALR 200 +++ + S + +I+E L+ Sbjct: 166 KHELSLLNLDSVDDMIKEGLK 186 >UniRef50_B1X417 Putative holliday junction DNA helicase RuvA n=1 Tax=Paulinella chromatophora RepID=B1X417_PAUCH Length = 215 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 10/208 (4%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI LRG +++ + L+ GG+GYEV++ + +LP+ + ++ H +VRE Sbjct: 1 MISWLRGELLKSWQQGTYNVALLNCGGIGYEVYLNRRDWEDLPKTREILELYIHMLVREK 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF +R +F+E+I NG+GP+LALA+ + + + + A+ ++ L K GI Sbjct: 61 QWTLYGFIEFDDRDIFREIININGIGPQLALALQTELRGPRLIEAIINGDLVTLTKAHGI 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G++TAERL E++ RF L+ D + L LGY E Sbjct: 121 GRRTAERLSTELRSRFVNLYHTNEVYLKQEGSIQGVLN-DSDLVHDIQNTLKTLGYNKLE 179 Query: 177 ASRMVSKIAR-----PDASSETLIREAL 199 R ++K+ ++ + +REAL Sbjct: 180 IQRAINKLKSKSSLVENSDFDVWLREAL 207 >UniRef50_Q8YZT2 Holliday junction ATP-dependent DNA helicase ruvA n=20 Tax=Cyanobacteria RepID=RUVA_ANASP Length = 213 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 17/209 (8%) Query: 1 MIGRLRGIII---EKQPPLVLI--EVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MI L+GI+ V++ EV G+GY++ +P +LP G +FTH+ VRE Sbjct: 1 MISYLKGIVAGIQNVGSNRVILTLEVNGMGYDLQIPQRLAKQLPTTGDLVQIFTHYQVRE 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 + LLYGF++ ER LF+ L+ +GVG A+A+L + V A+ V L++ PG Sbjct: 61 EIPLLYGFSSPAERDLFRHLLSVSGVGAASAIALLDTLELPDLVQAIIAANVQILIQAPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 +GKK AER+ +E+K + A +E L ALGY Sbjct: 121 VGKKIAERVCLELKAKLIEWRKSAGFFVA-------TEGPAPGILEEVQMTLFALGYTAH 173 Query: 176 EASRMVSKIARP-----DASSETLIREAL 199 E S + ++ DA E I++A+ Sbjct: 174 EVSHALHVVSEDIGLPKDAYVEDWIKQAI 202 >UniRef50_Q83GK0 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Tropheryma whipplei RepID=RUVA_TROWT Length = 194 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G++ +P V++ + G+G+ V +P + PE E ++T VRED+ L Sbjct: 1 MIASLSGLLEAVRPGSVVVNMHGIGFLVRVPQSF---NPEVDAEVKLYTSLQVREDSVSL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E T+F++LI +GVGP++ALAILS ++ + AV + L ++ G+GKK Sbjct: 58 YGFASVLECTVFEQLITISGVGPRVALAILSVLTPAEVAAAVLEGDDKPLQRVSGVGKKL 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +++++ + + L + D E V AL+ LG++ QE++ Sbjct: 118 AGTIVLQLAGKLTSVP-----------LENRKQEQAVDRSAEIVQALIGLGWQRQESAAA 166 Query: 181 VSKIARPDASSE--TLIREALR 200 V + D S ++R ALR Sbjct: 167 VESVLEKDQSLTMPEILRNALR 188 >UniRef50_C7LQQ8 Holliday junction DNA helicase RuvA n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQQ8_DESBD Length = 198 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPL-VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI L G ++ + VL+ GGVGY++H+ LP AG A +F H +VREDA Sbjct: 1 MIAYLEGTVLRRDEESCVLLTAGGVGYQLHLTSDGLAALPGAGDTARLFVHTLVREDALT 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+ F++ +ER F L+ +GPK ALA+L S + + +E+V AL ++PGIG K Sbjct: 61 LFAFSSWEERQAFVTLLGAPKLGPKTALAMLGCYSPAELAACIAKEDVAALSRVPGIGAK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+R L + L + A + AALV+LGY E Sbjct: 121 TAKR----------LLLDLKDKLVSSPSLLPGRTAPAPTASADCAAALVSLGYGRHEVDE 170 Query: 180 MVSKI--ARPDASSETLIREALR 200 +V + PD + + IR+AL+ Sbjct: 171 VVRVVFEKEPDLDAGSAIRQALK 193 >UniRef50_B9KYT2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RUVA_THERP Length = 191 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 101/201 (50%), Gaps = 16/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG ++ K+ VL++V GV + V T EL E G + TH +VRED L Sbjct: 1 MIRGVRGTLVAKRSGEVLVDVQGVTFRVQTSATTLQELGEPGDLVSLVTHLIVREDELAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E LF L+ +GVGP+ AL +LS + + + E + L + PGIGKKT Sbjct: 61 YGFATEAELELFLSLLAVSGVGPRGALNLLSLAAPDRLTEWIRGERIEELARAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E++ R L A + +QE VAAL ALGY QEA + Sbjct: 121 ASRIVLELRGRLPAL---------------TEVQAGEPIDQELVAALQALGYTAQEARQA 165 Query: 181 VSKIA-RPDASSETLIREALR 200 + R S E I ALR Sbjct: 166 ATHPEVRRAPSLEERIVAALR 186 >UniRef50_D1VUW2 Holliday junction DNA helicase RuvA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUW2_9FIRM Length = 198 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 6/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I E ++++ +GY + + +L +E ++ ++RED L Sbjct: 1 MLDFIKGNISEIYEGEIVLDNNDIGYLISISQLDISKL-SLNEELKIYLRLILREDNISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK RTLF L + VGPKL++ IL + + Q +A+ E+ L K PG+GKKT Sbjct: 60 YGFLNKDSRTLFDLLNTVSSVGPKLSMTILGALGSSQLRSAILSEDANILTKSPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ FT DL + +S D A+ AL++LGY EA Sbjct: 120 ANRIILELKDKISK---KSFTEDLDLSILD-SSDTIDINNDPALEALLSLGYNEYEAKIA 175 Query: 181 VSKIARPDASSETLIREALRAA 202 + + + +IR+AL+ Sbjct: 176 LRNV-DQNQELSEIIRQALKVM 196 >UniRef50_C5EYK8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Helicobacter RepID=C5EYK8_9HELI Length = 192 Score = 181 bits (461), Expect = 9e-45, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPE-AGQEAIVFTHFVVREDAQL 59 MI L+G I K+P + I+ GV YEV + + ++ + G+ + T ++REDAQ+ Sbjct: 1 MIIALQGEIFFKEPTRIAIKCAGVIYEVFISLQTSNQITQTKGENLTLLTTHIIREDAQI 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+ LF LIK NGVGPK+A+AILS + Q F VE ++ ++ ++PGIG K Sbjct: 61 LFGFLENNEKKLFDTLIKINGVGPKVAMAILSTYTPQTFAKVVESNDIKSMQRVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R++VE+ L + + D + V AL +LGYK + Sbjct: 121 SAGRILVELSGWSLELSQ------------TNQTIKEDSTLHQVVLALESLGYKNDIIQK 168 Query: 180 MVSKIARPDASSETLIREALR 200 + + + + +++ AL+ Sbjct: 169 AIKGLEKDE--VGQMVKAALK 187 >UniRef50_C9R8U6 Holliday junction DNA helicase RuvA n=1 Tax=Ammonifex degensii KC4 RepID=C9R8U6_AMMDK Length = 193 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 20/200 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ LRG ++EK+ +I VGG+G EV +P++ + LP G E ++T ++RED + Sbjct: 1 MLAFLRGSVLEKERGRAVILVGGMGLEVFLPLSLYERLPAKGGEVELYTCLLLREDRPEI 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ER F L+K GVGPK ALA+LS S ++ A+ E++ L +PG+GKKT Sbjct: 61 YGFGDREERDFFLRLLKIGGVGPKTALALLSCFSVEELREAIRSEDLEKLTVVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL++E+K+ +P +A +AVAAL+ LGY+ +EA Sbjct: 121 ARRLLLELKE-------------------EKGAPVEGEAAADAVAALINLGYRRREAEEA 161 Query: 181 VSKIARPDA-SSETLIREAL 199 V + A E L++ +L Sbjct: 162 VREAKARGAQGIEELLKLSL 181 >UniRef50_D1AXU1 Holliday junction DNA helicase RuvA n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXU1_STRM9 Length = 200 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 7/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GI+ K V+I++ GVGY+++ + + +L G++ ++ H +V+ED Sbjct: 1 MYEYFEGILSVKNLNYVVIDINGVGYKIYTSIKTYDKLNSIGEKERLYIHTIVKEDDISF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF N+ ER++F E I NG+G K A+AILS ++ + L K+PGIG K Sbjct: 61 FGFKNELERSIFLECIAINGIGAKKAIAILSNFEFEELAAIASSKNFKELAKVPGIGMKK 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+++V++ D+ +GL + + D+V + ++ AL +LGY+ + + Sbjct: 121 AEKIMVDLSDKLEGLKITNSSSSQDIV-------ELYNKKENLRLALESLGYEKVNINNI 173 Query: 181 VSKIARPDASSETLIREAL 199 + + + + LI+ AL Sbjct: 174 IEDKYIKELNMQELIKMAL 192 >UniRef50_C9MZD4 Holliday junction DNA helicase RuvA n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MZD4_9FUSO Length = 211 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 9/209 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y+V++ + F +L G + ++ + V+ED L Sbjct: 1 MFEYISGKLTIKKIDYVALDINGLAYKVYVSLKTFEKLDNIGNDEKLYVYTNVKEDDISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI +GVGPKL +AILS + ++ ++ V E ++PG+G K Sbjct: 61 YGFKTQNERELFKALISISGVGPKLGIAILSTFNTREIIDIVNENESKIFTRVPGLGIKK 120 Query: 121 AERLIVEMKDRFKGLHGDLF------TPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 A+++I+++KD+ K L + L+ ++ ++P +++ AL +LGY Sbjct: 121 AQKIILDLKDKVKKLDLTETIEEISDISSGKLITSNTSNPKLLLMKEDLKLALESLGYIN 180 Query: 175 QEASRMVSKIARPDASSETLIREALRAAL 203 + S+ ++ + + I EA++ L Sbjct: 181 SDVSKWIT---DKELAQVKDISEAIKIIL 206 >UniRef50_B2GIL9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Kocuria rhizophila DC2201 RepID=RUVA_KOCRD Length = 213 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 13/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED-AQL 59 MI + G + L ++EV G G EVH L G + T ++ R+D A L Sbjct: 1 MIASVTGEVAFVGATLAVVEVSGFGIEVHASPRTLSGL-RVGATTRLHTAYIARKDEAPL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+ +F ++ +GVGP+ ALA +S + + A+ + A +PGIG K Sbjct: 60 LFGFAQGDEKEIFTVMLGVSGVGPRTALAAVSVLGPEDARRAIAAGDDKAFTAVPGIGPK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R+++E+ D+ + + P + V AL LG+ ++A R Sbjct: 120 SARRIVLELADKL---------VLPEPPVQQANQPQVPVWRDQVVDALTGLGWSEKDAVR 170 Query: 180 MVSKIA--RPDASSETLIREALRAAL 203 + +P+ + E LRA L Sbjct: 171 GIEDALQTQPELGDSGNVAEILRAVL 196 >UniRef50_P73554 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Chroococcales RepID=RUVA_SYNY3 Length = 211 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 16/210 (7%) Query: 1 MIGRLRGIIIEKQPP-----LVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVR 54 MI L+G ++ +++ V GVGYE+ +P + + P + VFTH +VR Sbjct: 1 MIQFLQGQVVTVTKNIQNRWFLILSVNGVGYELQVPHSLAQQWTPPPPEPQQVFTHLLVR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 +D L+GF ER LF +L+ G+G +LA+A++ + + V AV V L + P Sbjct: 61 QDQIALFGFGRLAERDLFGQLMGVTGIGAQLAIALIETLGLEGLVQAVVTGNVKQLCQTP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+GKK AERL +E+K + H L + T P + ++ L+ALGY Sbjct: 121 GVGKKGAERLALELKTKLSQWH-KLQMGTGETDSTLPTTA----LLEDLEMTLLALGYTQ 175 Query: 175 QEASRMVSKIAR-----PDASSETLIREAL 199 E + ++ +++ E IR+A+ Sbjct: 176 TEIQQAIAMVSQVPDVAQSEDPEVWIRQAI 205 >UniRef50_C3WBK1 Holliday junction DNA helicase ruvA n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBK1_FUSMR Length = 196 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 110/203 (54%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L+G + K+P + ++V GVGY+V++ + + ++ + G+ ++ ++EDA L Sbjct: 1 MFEYLKGKVEYKKPDYLALDVNGVGYKVNISLRVYDKI-KTGESVRLYIFNYIKEDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++ER LF+ L+ GVG L L+I+S +Q V + L ++P +G+K Sbjct: 60 IGFLEERERNLFEMLLGVKGVGVSLTLSIMSTFDVEQLRKIVAENDYATLKRVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K + K + G+LFT +L + E E AL ALGY +E + + Sbjct: 120 AQQVILDLKGKLKAI-GNLFTQDENLFESFA-------IEDELYEALEALGYSQKEINSL 171 Query: 181 VSKIARPDASSETLIREALRAAL 203 VSK +S I EA++ L Sbjct: 172 VSKEEIRGFTS---IEEAIKCVL 191 >UniRef50_C3XJP3 Holliday junction DNA helicase motor protein n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XJP3_9HELI Length = 193 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELP-EAGQEAIVFTHFVVREDAQL 59 MI L G I K+P + ++ GV YEV + + ++ G++ + T ++REDAQ+ Sbjct: 1 MIIALEGEIFLKEPTRLGLKCTGVVYEVFISLQTSQQIQANIGEKLALHTTQIIREDAQM 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+TLF+ LIK NGVGPK+A+AILS + Q F VE ++ ++ ++PGIG K Sbjct: 61 LFGFLELLEKTLFERLIKINGVGPKVAMAILSTYTPQTFAKVVESNDIKSMQRVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R++VE+ + DLV + D Q+ + AL +LGYK +R Sbjct: 121 SAGRILVELSG-----------WSLDLVQGESLNVKKDSNLQQVILALESLGYKNDVIAR 169 Query: 180 MVSKIARPDASSETLIREALR 200 + + + S+ +++ AL+ Sbjct: 170 VTKGLENDEVSA--MVKAALK 188 >UniRef50_Q1J0F6 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Deinococci RepID=RUVA_DEIGD Length = 198 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 112/201 (55%), Gaps = 9/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + E + +I GGVGYEV P + L GQ A + VVREDAQLL Sbjct: 1 MIAYLSGAVREVREASAVIVAGGVGYEVFCPASTLGRLV-PGQPAELNIRHVVREDAQLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + LF LI +GVGPKLAL++LS + + +V L + G+GKKT Sbjct: 60 FGFLDTDSLRLFDLLIGVSGVGPKLALSLLSALPVTAVAQGLLSGDVKLLSSVSGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ AA +++ + T A ++A+ AL+ALG++ + + Sbjct: 120 AERLVLELQNKVPE------HLAAGAPVSAGKAALTSTAGRDAIEALLALGFREPQVRSV 173 Query: 181 VSKIA--RPDASSETLIREAL 199 V+++ P+ S++ LIR+ L Sbjct: 174 VAELLAADPEQSADALIRKGL 194 >UniRef50_C6JI67 Holliday junction DNA helicase ruvA n=5 Tax=Fusobacterium RepID=C6JI67_FUSVA Length = 198 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M LRG + K+P + ++V GVGY+V++ + + AG+E ++ + ++EDA L Sbjct: 1 MYEYLRGKVEYKKPDYLALDVNGVGYKVNISLRTYD-FINAGEEVKLYIYNYIKEDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++ER LF+ L+ G+G LAL+++S + V ++ L ++P +G+K Sbjct: 60 IGFLEERERNLFEMLLGVKGIGVSLALSVMSTFDIDTIRDLVATDDYNNLKRVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 +++LI+++K + K L A + + + E+E ++AL LGY +E + + Sbjct: 120 SQQLILDLKSKLKTLD------ALSIDTRNDDAARHLMIEEELISALEGLGYSKKEINTL 173 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ R + S I EA++ L Sbjct: 174 IT---REELKSFKTIEEAIKGVL 193 >UniRef50_A6Q8H2 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Epsilonproteobacteria RepID=RUVA_SULNB Length = 185 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 20/200 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ + P + + V G+ YE+ + + + E +F V+REDA LL Sbjct: 1 MIVGMEGIVERRDPTFIHLNVNGIIYEIQVSINTSNAIQEKR--VKLFITQVIREDADLL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F ++K NGVGPK+ LAI S + + F V ++V L ++PGIG K Sbjct: 59 FGFMDTNEKKMFDTVLKINGVGPKVGLAICSTFTPETFAKVVASKDVSMLKRVPGIGPKA 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE+ AD ++ A+ + A EAV AL +LG+K + Sbjct: 119 ASRILVEL---------------ADFIVDGNAAEGSSGALGEAVMALESLGFKKDAIQKA 163 Query: 181 VSKIARPDASSETLIREALR 200 +S + + TL++E L+ Sbjct: 164 LSGCSG---DTSTLVKEGLK 180 >UniRef50_C7NC64 Holliday junction DNA helicase RuvA n=2 Tax=Fusobacteriaceae RepID=C7NC64_LEPBD Length = 207 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y++++ + F ++ ++ H V+ED L Sbjct: 1 MFEYICGKLSVKKIDYVALDINGLAYKIYISLKTFEKMSNIESTEKLYIHTNVKEDNISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI NGVGPKLA+AILS + ++ V+ + E +K+PG+G K Sbjct: 61 YGFKTQNERELFKALISVNGVGPKLAIAILSTFNTKEIVDIILENEPKIFIKVPGLGIKK 120 Query: 121 AERLIVEMKDRFKGLHGDLF--TPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+++I+++KD+ K L + L + +S +++ AL +LGY + S Sbjct: 121 AQKIILDLKDKVKKLEFSEIINENSNTLNGNNISSSEILLMKEDLKLALESLGYADTDVS 180 Query: 179 RMVS-KIARPDASSETLIREALR 200 + + + I+ L+ Sbjct: 181 KWIKNDELIKIKNISEAIKIILK 203 >UniRef50_C9M7E3 Holliday junction DNA helicase RuvA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7E3_9BACT Length = 200 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ LRG +I + ++E GG+G++V + F L G+ + T+ V + L Sbjct: 1 MLASLRGTVILLEGSSAVVECGGLGFQVQLTRKAFG-LCRVGESVFLQTYLQVSDAGMSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L GVG KLA+ +L +SAQ+ + AV + L +PGIGKKT Sbjct: 60 FGFADAAERQAFELLTTVKGVGGKLAMTVLQSLSAQETIAAVAAGDSKTLTAVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E+ ++ +S A E + AL +LG+ + R Sbjct: 120 AERICFELSEKI----------TGSSEWSSADLTAKLQHSDEVIEALESLGFDHASSVRA 169 Query: 181 VSKIARPD---ASSETLIREALR 200 ++ + AS+E I LR Sbjct: 170 YQQLCQERGEPASTEEAIFNCLR 192 >UniRef50_B9L9P0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Nautilia profundicola AmH RepID=RUVA_NAUPA Length = 184 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 23/200 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I EK +L++V V YE+++ M F + + G + + +++E+ L Sbjct: 1 MIAALRGNIFEKDGGKILLDVNNVIYELNVSMITFSSVNDKG---LFYITEIIKENEYTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K E+ LF LIK NGVGPK+ALAI S + Q F++ + ++ AL K+PGIG K+ Sbjct: 58 YGFADKNEKKLFDSLIKLNGVGPKVALAICSTYTPQTFMDIIANHDINALKKIPGIGPKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++EM + +A++AL +LG+ + + Sbjct: 118 AKRILMEM------------------GEFEVVFEEQNPVFNQALSALESLGFNKNDIVKA 159 Query: 181 VSKIARPDASSETLIREALR 200 ++ I + E I+ AL+ Sbjct: 160 LNGIKSDNL--EETIKLALK 177 >UniRef50_Q8REJ7 Holliday junction ATP-dependent DNA helicase ruvA n=10 Tax=Fusobacterium RepID=RUVA_FUSNN Length = 194 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 105/203 (51%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G + K+ + I++ GVGY V+ P+ + ++ E G + ++ + ++ED L Sbjct: 1 MFEYLYGTVEYKKMDYIAIDINGVGYRVYFPLREYEKI-EVGNKYKLYIYNHIKEDTYKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++++R +F+ L+K NG+G LALA+LS S + + + + + L ++P +G+K Sbjct: 60 IGFLDERDRKIFELLLKINGIGSSLALAVLSNFSYNKIIEIISKNDYTTLRQVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+ +I+++K + K L + + D ++ V AL LGY +E + Sbjct: 120 AQIIILDLKGKLKNLTY------------TEEETVSMDMLEDLVLALEGLGYNKKEIDKT 167 Query: 181 VSKI-ARPDASSETLIREALRAA 202 + KI +S E I+ L+ Sbjct: 168 LEKIDLNKFSSLEDAIKGILKNM 190 >UniRef50_UPI00016C0EB8 Holliday junction DNA helicase RuvA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EB8 Length = 183 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 20/199 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + E+ ++L+EV G+GYE+ M E ++ + ++EDA L Sbjct: 1 MIGYLVGTVAERFENIILLEVNGIGYEIFMXGKIDVA------EVKIYIYENIKEDAYDL 54 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ LFK+LI NG+GPK A A++ V + E+ + ++PGIG K Sbjct: 55 YGFVSLAEKELFKKLISVNGIGPKAAAALIVLHGIN-LVECIVNEDASEITRVPGIGAKI 113 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RLI+E+KD+ + D +EA AALVALGY ++A+R Sbjct: 114 ASRLILELKDKLSAFK-------------TLEKRVVVDGLEEATAALVALGYNKKQAARA 160 Query: 181 VSKIARPDASSETLIREAL 199 V+ + S E I++AL Sbjct: 161 VNAVYNYSDSIEDTIKKAL 179 >UniRef50_C1XYW5 Holliday junction DNA helicase subunit RuvA n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYW5_9DEIN Length = 193 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ L+G + K V++ VGG G EV P T LPE G+ + T VVRED L Sbjct: 1 MVRYLKGTALRKTENSVILLVGGFGLEVFCPTTTLTHLPEEGE-IALHTKLVVREDDLSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF+ L+ +GVGPK+ L +LS +S A+ ++ L G+G+K Sbjct: 60 YGFADQRSLELFEMLLGVSGVGPKVGLNLLSSLSPALLARALADGDIRLLTGAQGVGRKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ +E++ + P T +EA ALV LG++ + Sbjct: 120 AERIALELRGKVPPHLMGEAGPILRRPQT-----------EEAELALVTLGFRENQVRSA 168 Query: 181 VSKIA--RPDASSETLIREALRA 201 V++I P+AS++ +IR AL+A Sbjct: 169 VAQIVQQNPEASTQEIIRLALKA 191 >UniRef50_A5IKQ6 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Thermotoga RepID=RUVA_THEP1 Length = 188 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 19/201 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G +++K ++L+E GV +E+ + E+ E G+ + T V +D Sbjct: 1 MIAGISGRVLKKSGNVLLVETKSGVVFEIVCDVQTSEEVEEGGE-CFLHTFLSVSQDGIT 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+N++++ LF L K + +GPK AL I+S A+ V + ++V L KLPGI KK Sbjct: 60 LYGFSNERKKELFLSLTKVSRLGPKTALKIISNEDAETLVTMIASQDVEGLSKLPGISKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAER+++E+KD F+ E++ AL++LGY ++A Sbjct: 120 TAERIVMELKDEFESAGIKDMR-----------------IYHESLEALISLGYPEKQARE 162 Query: 180 MVSKIARPDASSETLIREALR 200 V + R + LI+EAL+ Sbjct: 163 AVKHVYREGMKTSELIKEALK 183 >UniRef50_UPI000038462D COG0632: Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038462D Length = 173 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 3/164 (1%) Query: 40 EAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFV 99 E G A +F VREDA L+GF + ER F+ L GVG K+ LAILS + Q + Sbjct: 2 EVGSAATLFIETQVREDAISLFGFLDTGERDWFRLLTTVQGVGAKVGLAILSVAAPDQLL 61 Query: 100 NAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA 159 + ++ L + G+G K A R++ E+KD+ + F P A V +S PA Sbjct: 62 QIIAAQDKAGLTRANGVGPKLAVRILTELKDKAGKIALGGFNPTAGAVASSAPLPAASGR 121 Query: 160 EQEAVAALVALGYKPQEASRMVSKIARP---DASSETLIREALR 200 ++AV+ALV LGYK EA + V + AR DA S LIR +L+ Sbjct: 122 MEDAVSALVNLGYKRLEAFQAVGETARELGDDADSSALIRASLK 165 >UniRef50_A7VWM3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWM3_9CLOT Length = 168 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 7/171 (4%) Query: 32 MTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILS 91 M LP G+EA+++TH VREDA L+GF++ E FK L +GVGPK+ LAILS Sbjct: 1 MNTQRSLPAIGKEAVLYTHMNVREDAVDLFGFSSLAELNCFKLLTSVSGVGPKVGLAILS 60 Query: 92 GMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSP 151 +S +Q AV + L G+G K A+R+I+E+KD+ K L G + V + Sbjct: 61 VLSPEQVAVAVAAGDFKTLTMAQGVGNKLAQRVILELKDKLKALGG------GEEVTAAA 114 Query: 152 ASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAA 202 EA+ AL LGY P + + +V+K E LIR L+A Sbjct: 115 GVVNAAGNAAEAMNALTVLGYTPSDVAPVVAKFDS-SLPVEELIRLTLKAM 164 >UniRef50_A5CS07 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Microbacteriaceae RepID=RUVA_CLAM3 Length = 214 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 11/178 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ +L+EV GVGY V + EL G EA V T VVRED+ L Sbjct: 1 MISSLRGTVLSVSGQTLLLEVHGVGYGVSVTPRHALELRN-GSEATVLTSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF E F+ L GVGPK ALA+L + + AV E+ A ++ GIG KT Sbjct: 60 FGFPGPDELRAFELLCGVTGVGPKSALAVLEHLDPEAMAQAVAAEDDAAFRRVSGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+ +++++ + + A+ A + V AL+ LG+ + A Sbjct: 120 AKLIVLQLAGKLFVTQPRARS----------ATSAASTVTADVVTALIGLGWSERVAR 167 >UniRef50_A9B9X1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=RUVA_PROM4 Length = 223 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 21/219 (9%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G I+ ++ GVGYE+ + L ++ H V++ED Sbjct: 1 MIGWLKGEKIDHWNNGNRAGFVLSCNGVGYEIQLSRRNLIALNNYN-VLSIWIHQVLKED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF K ER LF++LI +GVGP+LA+++L S +Q + V+ +EV L + G+ Sbjct: 60 GSNLFGFIEKSERDLFRKLITVSGVGPQLAMSLLDDNSYEQLIANVQNKEVTKLTRSSGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERLI+E++++ + + A ++ E +AL L Y E Sbjct: 120 GKRTAERLILELQNKLSDFDLNNEFSPPTKLRPESAEDLNEELLTEIKSALRNLDYSDFE 179 Query: 177 ASRMVS----------------KIARPDASSETLIREAL 199 V+ K+ + E L ++AL Sbjct: 180 ILEAVNTVTSNYLDDAASANERKLLLKSLNFEKLFKQAL 218 >UniRef50_D2MP66 Holliday junction DNA helicase RuvA n=1 Tax=Bulleidia extructa W1219 RepID=D2MP66_9FIRM Length = 192 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G+I E ++I G+G+ V+ P + G+E VFTH V E+ L Sbjct: 1 MIAFIQGVITEIGDDYIVINHQGLGWLVYYPHSLE---VHVGEELQVFTHMSVSENDMRL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ +E+TLF LI G+GPK A+ +L A+ + +V AL KLPGIG K+ Sbjct: 58 YGFSSSKEKTLFLNLISVKGLGPKTAMTMLQKSGYALITEAISKGDVAALKKLPGIGAKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +++++++ + + ++S QEA+ AL GYK + + + Sbjct: 118 ASQIVLDLQGKLVAVE-----------VSSTKMMNYPLEIQEALEALKNFGYKGGDLNVV 166 Query: 181 VSK-IARPDASSETLIREALR 200 +K + +P +E IR L+ Sbjct: 167 GNKMLEQPSMKTEEYIRFGLK 187 >UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCG6_9PROT Length = 180 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 27/200 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I EK + ++V + YE+++ + F + I + +++E+ L Sbjct: 1 MIAALKGKIFEKDNGKIFLDVRDIIYELNVSLNTFANAKDG----IFYITEIIKENEYSL 56 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK E+ LF LIK NGVGPK+ALAI S + +F++ + +++ +L K+PGIG K+ Sbjct: 57 YGFINKNEKKLFDNLIKLNGVGPKVALAICSTFTPDEFISIISSQDINSLKKVPGIGPKS 116 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++EM D + +AV AL LG+K + + Sbjct: 117 AKRILMEMGD--------------------FEIENINPIISQAVTALENLGFKRADILKA 156 Query: 181 VSKIARPDASSETLIREALR 200 +S + D S E +I+EAL+ Sbjct: 157 ISGL---DGSLEDIIKEALK 173 >UniRef50_C0VVS8 Holliday junction DNA helicase motor protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVS8_9CORY Length = 200 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 94/202 (46%), Gaps = 10/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++ K +IE GGVGYE ELP G++ V T V+ E L Sbjct: 1 MIASLHGEVVAKSLTGGVIECGGVGYEFLATAATLAELP-LGEDGRVLTTMVIGEKVVTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ERT+F +L G+GPKLALA L+ S + AV ++ L +PG+G + Sbjct: 60 YGFAHDSERTMFSQLQGVQGLGPKLALACLNTYSPSEIAVAVANDDKKTLQAIPGVGARM 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++ + + T TS A+ + VAALV LG+ A+ Sbjct: 120 AAKMTAVLDGKLDEFIDSTAT-------TSSAAEPVTGGSETVVAALVQLGFDEDSANHA 172 Query: 181 VSKI--ARPDASSETLIREALR 200 + + P + T +R AL+ Sbjct: 173 AAWAEESNPGGDTGTNLRHALQ 194 >UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Thermosipho RepID=RUVA_THEM4 Length = 189 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G++ + + + + V + YE+ + T ++E ++ VFT +V +D L Sbjct: 1 MIYAMYGVLEDIENGKLYLNVNEIVYEIVVGDTGYFE-DFLNEKIKVFTKMIVNDDEISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + LF++LI N +GPK AL I++ V+A+ E+V L LPGIG KT Sbjct: 60 YGFSDVLKLKLFEKLILVNKLGPKSALKIITSSDVSYIVSAIVNEDVKTLSTLPGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD K L D EA+ ALV LG+ ++ + Sbjct: 120 AERIILELKDSMKEFDVTLTE--------------KDKKILEAIEALVTLGFSRNQSKKA 165 Query: 181 VSKIARPDASSETLIREALR 200 V++I + D S + +I++AL+ Sbjct: 166 VTQILKKDDSLDDIIKKALK 185 >UniRef50_A5KTE9 Holliday junction DNA helicase RuvA n=2 Tax=candidate division TM7 RepID=A5KTE9_9BACT Length = 187 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + EK ++I+V GVGYEV + + EL +E ++T+ VRE + L Sbjct: 1 MIAHVVGRLTEKFIDSIIIDVNGVGYEVLVTALEYEEL-ALQEEVKLYTYHHVREQVEEL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + LF+ LI G+GPK ALAILS + +A+ + G + + G+GK+T Sbjct: 60 YGFSSLAGKRLFELLITVQGIGPKAALAILSLGDPEVVRSAIASSDSGFIQRASGVGKRT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++V++ D+ TP + + Y ++A+ + Sbjct: 120 ADRVVVDLADKVGLPSQAGHTPKQAGGDDALDALLALG-------------YNVRQATEV 166 Query: 181 VSKIARPDASSETLIREALRAA 202 ++++ + E +R+AL+ Sbjct: 167 LAEL-DTTLTVEEKVRQALKRM 187 >UniRef50_A8UZA0 Holliday junction resolvasome DNA-binding subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZA0_9AQUI Length = 180 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 26/200 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G +IE ++IE G G ++ P ++ ++T+ ++++ L Sbjct: 1 MIDYIKGKVIEVLNDFIVIETGNFGIKIETPHKF------EKKDTKIYTYLTFKDESFRL 54 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++Q R LF +L NG+G K A +IL + + F AVE + L +PGIGKKT Sbjct: 55 FGFKDRQTRELFIKLTSINGIGVKHAFSILKNFNYEDFTLAVENNRIDLLSSVPGIGKKT 114 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K + +F +AV ALV+LG++ ++ ++ Sbjct: 115 ASRIILELKGKLSFSEEPIF--------------------NDAVEALVSLGFEKEKVIKI 154 Query: 181 VSKIARPDASSETLIREALR 200 V ++++ S E LI+ +L+ Sbjct: 155 VKELSQKTNSLEELIKLSLQ 174 >UniRef50_Q5GT34 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Rickettsiales RepID=RUVA_WOLTR Length = 196 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 19/202 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHF--VVREDAQ 58 MIG L G + E +++ V VGY +++ + G + + RE+ Sbjct: 1 MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKAL-NVCYIGSKIKLLIETCANNRENTT 59 Query: 59 LLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 LYGF NK+E++ + L+K +GV K A++ILS ++ +Q A+ E+ AL K+ G+G Sbjct: 60 QLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGP 118 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 K R+I E+ + L + + ++AV+AL+ LGY+ + Sbjct: 119 KLINRIITELSGKVSKLETN--------------NNNFYPINEDAVSALINLGYEKTKVY 164 Query: 179 RMVSKIARPDASSETLIREALR 200 + K +P+ ++ +IR AL+ Sbjct: 165 DTIKK-YKPNLDTKDIIRTALK 185 >UniRef50_A0RP49 Holliday junction ATP-dependent DNA helicase ruvA n=24 Tax=Campylobacter RepID=RUVA_CAMFF Length = 184 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 21/201 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + GII +K+P V I+ GV Y + + + L + G++ +F V+REDA L Sbjct: 1 MIKAIEGIITKKEPTNVWIKTLSGVSYGISISLFTSASL-QKGEKVELFITQVIREDANL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + E+ +F+ L+K NG+G A+A+ S + +F AV + L ++PGIG K Sbjct: 60 LYGFIKESEQRIFEMLLKVNGIGASTAMAVCSSLGPDEFSIAVMNGDDAVLRRVPGIGPK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA LI ++ D + + EA AL +LG+K S+ Sbjct: 120 TARTLIAQLSD-----------------AKFGEINSMPSYQNEAFMALESLGFKRDRISK 162 Query: 180 MVSKIARPDASSETLIREALR 200 ++++ + D + +LI+EAL+ Sbjct: 163 VLNECSSND--TASLIKEALK 181 >UniRef50_Q2RHT6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RUVA_MOOTA Length = 202 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + P +L+E GG+G+ V P G E V+T VVREDA L Sbjct: 1 MIGYLRGRLHLVTPEGILLETGGIGWLVRT--VTNRSWPAPGTEIAVYTQLVVREDAMEL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E LF L NG+GP+ AL IL +Q A+ + L LPGIG K Sbjct: 59 YGFTRPEELHLFTLLRGVNGIGPRGALQILGAAKPEQLSRAIAAGDSAFLTALPGIGAKK 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL++E+KD + + A PA EA+AAL+ALGY +E + Sbjct: 119 AQRLLLELKD-------AVLKSGLVDGTETEAIPAGGGDNDEALAALLALGYSREEIGPI 171 Query: 181 VSKIARP---DASSETLIREALR 200 ++++ + A + +++ L+ Sbjct: 172 LARVRQELGNAAPTTAVLQAVLK 194 >UniRef50_C7TAK4 Holliday junction DNA helicase RuvA n=9 Tax=Lactobacillus RepID=C7TAK4_LACRG Length = 198 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 16/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G I P ++I+V G+G+ + + + EAG++ ++ ++RE+ Q L Sbjct: 1 MYEYFEGTIQAVTPAYIVIDVNGIGFRLLVANPYDF---EAGKQTRIYVQLIIRENDQTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ F +L+ G+GPK ALAIL+ +S+ A+ +++V L K PGIGKKT Sbjct: 58 YGFETAADKRTFNQLLSVTGIGPKSALAILANVSSGGLATAIAQDDVKFLTKFPGIGKKT 117 Query: 121 AERLIVEMKDRF---KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 A ++I+++K + P AD V A GY + Sbjct: 118 AAQIILDLKGKITTDAQPAAATIMPTADQVAPELADALAALVAL---------GYTQRAV 168 Query: 178 SRMVSKIARPDA-SSETLIREALR 200 + + DA +++ +RE LR Sbjct: 169 DGITDALKAFDATTTDAYLREGLR 192 >UniRef50_B2S3D5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Treponema RepID=RUVA_TREPS Length = 227 Score = 168 bits (426), Expect = 1e-40, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 4/187 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + GI+ + + +EV G+ +E+ + E G VFT REDA L Sbjct: 1 MFESISGILTLHERERLCVEVHGIEWEIAVSAYSSAAFGEVGSHVKVFTWLYHREDALRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+N QERTLF L K G+GPK AL +LS +S+Q A++ ++ AL ++PGIGKKT Sbjct: 61 FGFSNVQERTLFLSLTKVEGIGPKQALKVLSSISSQALCAALDTGDLCALQRIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPAT----DDAEQEAVAALVALGYKPQE 176 A+R+++ +K + + S ++ V ALV +GY + Sbjct: 121 AQRMLLALKGTLALTDAASCAQSQTDDRAAHPSNLGCAPHAREIEDLVTALVQMGYDRKM 180 Query: 177 ASRMVSK 183 A+ ++++ Sbjct: 181 AAEVIAQ 187 >UniRef50_Q7U7F0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Synechococcus sp. WH 8102 RepID=RUVA_SYNPX Length = 205 Score = 166 bits (422), Expect = 4e-40, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G + + LVLI GGVGY+V + + + Q + H VV D Sbjct: 1 MIGWLKGDVQHRDQKGSRNLVLIACGGVGYDVQLIERDWQAV-STDQRHEFWIHQVVSAD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF ER LF+ELI+ +GVGP+ LA+L+ + ++ V A+ ++ L + G+ Sbjct: 60 NLQLFGFLQLAERDLFRELIQVSGVGPQAGLALLNACAYKELVTALVHSDLKTLCRAKGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL +E++ R + T P D + +A L LG++ E Sbjct: 120 GKRTAERLALELRTRL----------TDSVASTGPERNQLDPVAPDLIATLETLGFETHE 169 Query: 177 ASRMVSKI-----ARPDASSETLIREALRAA 202 + ++ + + +R ++ Sbjct: 170 IRDALQRLNGMGGPQDGDDDDAWLRACIKLM 200 >UniRef50_C1TMQ3 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMQ3_9BACT Length = 202 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 14/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ + G +++ + +++V G+G+E+ + L G+E + H + L Sbjct: 1 MLAMVTGTVLDVTTQMAVVDVSGLGFEMQLTRK-ASSLCSVGKEVSLHCHVQFSDAGPTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F L+ G+G KLAL +L GM+A+ V AV + L +PGIGKKT Sbjct: 60 FGFADGLEKAVFLRLLSVRGIGGKLALQVLQGMTAEAVVQAVSFGDPSGLTGVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E++++ T ++ + + AL +LG++ Q +S Sbjct: 120 AERICFELQEKMSEGLPKGSTDNLREMVVPDSET--------VMEALESLGFQRQSSSEA 171 Query: 181 VSKIAR-----PDASSETLIREALR 200 ++ IA+ E LI ALR Sbjct: 172 LAAIAKKRGSVDGLGVEDLIMLALR 196 >UniRef50_C1DXL3 Holliday junction DNA helicase RuvA n=3 Tax=Sulfurihydrogenibium RepID=C1DXL3_SULAA Length = 181 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 108/199 (54%), Gaps = 25/199 (12%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I++ +++E G G ++++P + + E V+T V+E+ + Sbjct: 1 MLEFIKGKIVKVDKNKIIVEKDGFGIKINVPDS-----EKFSDEDTVYTILKVKEEEIRV 55 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++E+ LF +L + +GVG K ALAIL S +F++ +++ +V +L K+ GIGKKT Sbjct: 56 IGFKTQEEKELFNKLTQIHGVGEKHALAILGHFSIDEFIDILDQSDVDSLTKVQGIGKKT 115 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IVE+K + + + Q+ V L LG+ +++ ++ Sbjct: 116 AQRIIVELKGKVDF--------------------SENSLIQDFVKTLTNLGFDKEQSYKV 155 Query: 181 VSKIARPDASSETLIREAL 199 V K+ + D + E ++++A+ Sbjct: 156 VRKLLKEDNNVENILKKAI 174 >UniRef50_B8H455 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Alphaproteobacteria RepID=RUVA_CAUCN Length = 205 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDA-QL 59 MIGRLRG + E LI+V GVGY V LP G+E ++ E A Sbjct: 1 MIGRLRGAVAEVGEEEALIDVMGVGYLVRCGHRTLQRLPALGEETLLHIESQWSESAGLR 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +++R F L GVGPK A+A+L +S + +AV RE+ A+ + G+G K Sbjct: 61 LYGFLTREDRRAFVLLQAIQGVGPKAAMAVLDVLSPAELASAVAREDKAAVGRANGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP---QE 176 A R++ E+KD+ D + ++P++PA +AVAAL+ LG + Sbjct: 121 LALRIVTELKDK---PITDGPVLMSAPTSSAPSAPAKPAPTGDAVAALMGLGVAEVNARR 177 Query: 177 ASRMVSKIARPDASSETLIREALR 200 + +A+ + LI+ L+ Sbjct: 178 VVEAAAAELGEEATVQALIKAGLK 201 >UniRef50_UPI0001C338F3 Holliday junction DNA helicase, RuvA subunit n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C338F3 Length = 213 Score = 164 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 16/210 (7%) Query: 1 MIGRLRGIIIEKQPPL-----VLIEVGGVGYEVHMPMTCFYELPEAGQE-AIVFTHFVVR 54 MI +G +E +++EV +GYE+ + +L + VF H R Sbjct: 1 MINYFKGSFVEILKDTKNKIVLIMEVNQIGYEIQITSKLEEKLSNKKSDYIQVFIHLQTR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 ED+Q+LYGF NK E+ LF++LI NG+G +L++ +L+ + +++ + AV V L + P Sbjct: 61 EDSQILYGFINKLEQELFRQLININGIGAQLSITLLNTLGSEKLIKAVCSGNVKMLSESP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+GKKTAER+I+E+ + L A ++ + + ++++ ++ ++L+ LGY Sbjct: 121 GVGKKTAERIILELNSKLLKL-----IEAFEIKVELHSCNSSENTLEDITSSLLLLGYDR 175 Query: 175 QEASRMV-----SKIARPDASSETLIREAL 199 + R+ ++ ++E L+R A+ Sbjct: 176 EGVDRVTVYLKNNQFLSKQINTEELLRTAI 205 >UniRef50_A6GER9 Holliday junction DNA helicase motor protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GER9_9DELT Length = 206 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 7/190 (3%) Query: 17 VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELI 76 V+++V GVGYE+ + + +P G E ++ H VREDA L+GF +ER LF+ L Sbjct: 11 VILDVKGVGYELFVSIQTLAGVPAEGDEVELWVHTNVREDAITLFGFAEAEERLLFRMLT 70 Query: 77 KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLH 136 VGP+ A+A+L G A + + + ++ LVK+PGIGKKT+E++++ + D+ L Sbjct: 71 SVPKVGPRNAVAVLGGFPAIELLETIAAKDSAKLVKIPGIGKKTSEQIVLTLGDKVVTLL 130 Query: 137 GDLFTPAADLVLTSPA--SPATDDAEQEAVAALVALGYKPQEASRMVSKIARP-----DA 189 L T D EA L++LG+K + + + + + Sbjct: 131 ELLRAQRGGEPGTQAELLPAEAPDFGTEAREVLLSLGWKGRAVEKALVAVEAELAEGANV 190 Query: 190 SSETLIREAL 199 + L+R L Sbjct: 191 QLDALVRMTL 200 >UniRef50_D1Y1N8 Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1N8_9BACT Length = 203 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ +RG ++E+ ++E G G EV + E G + ++T V + +L Sbjct: 1 MLASIRGKVVERSEFTAVVECNGFGVEVLLTRRAAERC-ELGTQVFLYTLLQVGDAGIVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER FK +I T GVG K A++IL +S + V AVE+ ++ L +PGIGKKT Sbjct: 60 YGFADDTERRTFKLMILTKGVGGKAAISILQYLSPAEIVAAVEQNDIRLLTSVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E+ DR T A + AL +LG+ A R Sbjct: 120 AERICFELSDRIHKKGFIQLTGEFHGAPAGDRQAAAS-----VLDALESLGFDRASAVRA 174 Query: 181 VSKIARPDASS---ETLIREALR 200 + + I LR Sbjct: 175 YKSVVAEQGEALGESETIMSCLR 197 >UniRef50_Q7VCI6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Prochlorococcus marinus RepID=RUVA_PROMA Length = 222 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 9/195 (4%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI L G+ IE VLI GVGYEV + ++ +L +E I++ H V RED Sbjct: 1 MISWLNGLKIEIWENGTRKGVLISCSGVGYEVQL-LSRSLQLLNTSKELILWVHEVHRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L GF NK ER LF++LI +GVGP+LA+++L A+Q ++A+ ++++ L PG+ Sbjct: 60 GSQLIGFLNKLERDLFRKLISVSGVGPQLAISLLEKNPAEQLISAITKKKIAQLTSCPGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GKKTAERL++E++++ L G + + + D E + L+ L YK E Sbjct: 120 GKKTAERLVIELQNKLSDLIGSSLKKTNNHLELEYETNVAD----EVRSTLLNLDYKNSE 175 Query: 177 ASRMVSKIARPDASS 191 + + S Sbjct: 176 IEKAFLEFETSSKSI 190 >UniRef50_A4XJS2 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Clostridia RepID=RUVA_CALS8 Length = 197 Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 100/202 (49%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G I E V++ + ++ T F E G+E V+ E+ L Sbjct: 1 MIDSIVGTIQEVFNNYVILNYNNIYIKIFCNSTKFSEF--LGKEKRVYVSLKFNENLSEL 58 Query: 61 --YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 YGF ++ER LF +L K GVG KLAL ILS + QQ + + + V L K+ GIGK Sbjct: 59 ECYGFLTREERELFLKLQKVTGVGSKLALQILSSIDYQQLIVEIAKGNVARLEKVKGIGK 118 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTA R+I+E+K+ K + TS T + +E AL++LGY+ E + Sbjct: 119 KTASRIILELKETLKK--------EFKVASTSGTEEKTYEKLEEISLALLSLGYEIDEIN 170 Query: 179 RMVSKIARPDASSETLIREALR 200 +++S + S E I+ AL+ Sbjct: 171 QVLSSEDFSELSLEDGIKLALK 192 >UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F8Q5_THELT Length = 186 Score = 162 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 18/196 (9%) Query: 5 LRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFN 64 ++G + K V++E+ G ++ + + + GQ + TH ++ +YGF Sbjct: 3 VKGTVHSKNGSSVILEINGFLIKILCDIETLEK-AQIGQTVQLHTHLEFSQEGITIYGFL 61 Query: 65 NKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERL 124 +K+ +F++++K + +GPK AL I+S ++ V+ + ++V L + PGIGKKTAERL Sbjct: 62 SKERLYVFEKILKVSKIGPKTALRIVSTSEPEELVHLIISQDVEKLSRFPGIGKKTAERL 121 Query: 125 IVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKI 184 I E+KD + D +A+ ALVALG+ E+ + Sbjct: 122 IAELKDEEFEIKSDY-----------------SKELSDAIDALVALGFGKIESREAAKSV 164 Query: 185 ARPDASSETLIREALR 200 +E +++EAL+ Sbjct: 165 YHSSKKAEQIVKEALK 180 >UniRef50_Q3YRE0 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=canis group RepID=RUVA_EHRCJ Length = 190 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 20/203 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVV-REDAQL 59 MIG L GII E +++ VG VGY VH+ + G ++ V R++ Sbjct: 1 MIGSLTGIIEEIYITYIILNVGNVGYIVHVSQRVLQTC-KIGNNIKLYIETHVNRDNLTQ 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +KQE+ + LI NG+ K A++ILS +S +Q +AV A + GIG+K Sbjct: 60 LYGFLDKQEQDYMRMLITINGINYKTAMSILSKLSPEQIFSAVVSNNKNAF-RGNGIGEK 118 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A R+ E++ + + P E +++AAL++LGY +A Sbjct: 119 LAGRITTELQYKISKM---------------PIEETLIIKEDDSLAALISLGYDKLKAFN 163 Query: 180 MVSKIAR--PDASSETLIREALR 200 + +I P+A+ + +IR+AL+ Sbjct: 164 AIQEIKSDFPNANIQEIIRKALQ 186 >UniRef50_B0PAT7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAT7_9FIRM Length = 172 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 6/172 (3%) Query: 30 MPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAI 89 +T LP G EA ++TH VREDA LYGF + E FK LI +GVGPK ALAI Sbjct: 2 TTLTTLSCLPPVGGEATLYTHLNVREDALDLYGFYTQAELNAFKMLIGVSGVGPKSALAI 61 Query: 90 LSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLT 149 LS M+ + + + +L PGIG K A+R+I+E KDR L Sbjct: 62 LSDMTPDKLALCIAAGDSKSLRAAPGIGPKAAQRIILECKDRIGASELSGEMSEVASQLR 121 Query: 150 SPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRA 201 + ++ A A GY P E + D E +I+ L+A Sbjct: 122 HETTNMSEAASALAAL-----GYSPTE-AAQALAGLAADMPVEDMIKHGLKA 167 >UniRef50_Q03B18 Holliday junction ATP-dependent DNA helicase ruvA n=26 Tax=Lactobacillales RepID=RUVA_LACC3 Length = 198 Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GII P ++I+V G+G+ + + + EAG++ V+ ++R++ Q L Sbjct: 1 MYEYFEGIIQAVTPAYIVIDVHGIGFRLLVANPYHF---EAGEQKRVYVQLIIRDNDQTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ F +L+ G+GPK ALAIL+ +S+ A+ +++V L K PGIGKKT Sbjct: 58 YGFEGAADKRTFNQLLTVTGIGPKSALAILANVSSGGLATAIAQDDVKFLTKFPGIGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+++K + A + + A A A+ GY + + Sbjct: 118 AAQIILDLKGKITTDGQPAAAAIAPVASDVDSELADALAALVAL------GYPQRTVDGL 171 Query: 181 VSKIARPDA-SSETLIREALR 200 + A +++ +RE LR Sbjct: 172 TDTLKAFSAKTTDAYLREGLR 192 >UniRef50_UPI0001C31CBF Holliday junction DNA helicase RuvA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CBF Length = 198 Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 16/207 (7%) Query: 1 MIGRLRGIIIEKQP-----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MI +RG + ++P V+++V GVGY + + ++P AG+ + +H +VR+ Sbjct: 1 MIALVRGEVAGRRPAAPAGGDVVVDVNGVGYRLAVSSETLKQVPAAGKRVTLHSHLIVRD 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 DA LYGF ++ER LF L+ VGPK+ALA+LSG + ++ + A+ + +PG Sbjct: 61 DALQLYGFATEEERDLFLMLLGVQSVGPKVALAVLSGGTPRELLGALAAGDAARFQAVPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 IGK+TAER+IVE++++ A S A+DD A LV LG+ Sbjct: 121 IGKRTAERIIVELREK---------AGVAVPDDAVHGSVASDDPRTLAREGLVGLGFSLD 171 Query: 176 EASRMVSKIARPDASSETLIREALRAA 202 EA R++ + P ++E LI ALR + Sbjct: 172 EAERLLKRA--PGETAEELIAHALRTS 196 >UniRef50_C3XDN4 Holliday junction DNA helicase motor protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDN4_9HELI Length = 189 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 20/202 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL+G I + P V +EV GV Y V + + L + ++RED+ LL Sbjct: 1 MIVRLKGNIEKLLPTGVELEVSGVTYMVEISLLTSAALQNK-THVTLEIAEIIREDSHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ER +F +L+K NGVG K+AL ILS S +QF+ V+ + AL + GIG K Sbjct: 60 YGFETRREREVFLQLLKVNGVGAKIALMILSSYSVEQFLAIVQTNNLAALKGVKGIGTKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++E+ T + Q A ALVALG+K + ++ Sbjct: 120 AGKIMLELAG-----------------YTQSIQTPNNVNVQLAHEALVALGFKDTQITQA 162 Query: 181 VSKIARP--DASSETLIREALR 200 + ++ +++ L+ Sbjct: 163 LQGLSNEILQMPPNDMVKAILQ 184 >UniRef50_C0QRQ4 Holliday junction DNA helicase RuvA n=1 Tax=Persephonella marina EX-H1 RepID=C0QRQ4_PERMH Length = 179 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 27/200 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I K+ + +I++G V P + +++VF +++D L Sbjct: 1 MIEFLKGKIKHKKDDIYIIDLGTVALRFRSPS-------DLKDQSVVFIEMFIKDDRVEL 53 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER +F L+ NGVG K AL+IL S ++F VE ++ L G+GKKT Sbjct: 54 YGFKTPEEREIFNRLLSINGVGVKHALSILRSFSPERFFEIVENRDITTLTTAQGVGKKT 113 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E++ + + +L ++ V AL LG+ + + Sbjct: 114 AQRIVLELQGKLDFIENELL--------------------KDLVDALTGLGFDKKRVLSV 153 Query: 181 VSKIARPDASSETLIREALR 200 + + + E ++ AL+ Sbjct: 154 AKDVLKETDNLEKALKLALQ 173 >UniRef50_B1H0B1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RUVA_UNCTG Length = 204 Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 20/211 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDA--- 57 MI L G + K + I+V G+GYE+ +P++ F +LPE ++ V A Sbjct: 1 MIDYLYGTLDSKSTDGITIDVNGIGYEISVPISTFLKLPETRNPIKIYI---VESTAGMY 57 Query: 58 ---QLLYGFNNKQERTLFKELI-KTNGVGPKLALAILSGM--SAQQFVNAVEREEVGALV 111 LYGF +ER ++ + K +G+G K A+ + S F A+ + L Sbjct: 58 GGVISLYGFFTIEEREMYLLIKDKVHGIGAKKAMEYTDKISKSFANFKTAIISKNPSMLN 117 Query: 112 KLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALG 171 ++ G KKTA++LIV +KD+ ++ + + A + EA+A L+ LG Sbjct: 118 EIFGFTKKTADKLIVALKDKISTVN------VLNKEKQTGAETIKNTMVSEAIAGLITLG 171 Query: 172 YKPQEASRMVSKIAR--PDASSETLIREALR 200 YK Q+A V+ + + + E LI+++L+ Sbjct: 172 YKMQQARVAVTNVYEHNENITLEDLIKKSLQ 202 >UniRef50_A7HL71 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=RUVA_FERNB Length = 188 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 23/203 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI + +L+ + GV + + F E E G + +V+T +V ++ + Sbjct: 1 MIEIIEGIYKGRSEGKILVSINGVVFGIITDAESFSEFNE-GDKILVYTKLIVSQEDMTI 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++K ++ F++LIK + +GPK A+ ILS + NA+ +V L +PGIG+KT Sbjct: 60 YGFDSKVKKETFEKLIKVSKLGPKTAIKILSSTTVDFLSNAIATGDVEKLSSIPGIGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I E+KD F+ + + A+ ALV+LGY +A Sbjct: 120 AERMITELKDEFEVVEVNEEMLE-------------------AIEALVSLGYSKTQARNA 160 Query: 181 VSKIARPD---ASSETLIREALR 200 VSK+ + ++ +I+EAL+ Sbjct: 161 VSKVLKESPNISNVSKIIKEALK 183 >UniRef50_B2KCD9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Elusimicrobium minutum Pei191 RepID=RUVA_ELUMP Length = 202 Score = 156 bits (394), Expect = 6e-37, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 14/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G I+ VLI V GVGYEV+ L E + A+ + D +L Sbjct: 1 MIGYLKGQILSLSEDSVLILVNGVGYEVNCAPVAVSALEEGQETALYIAESISPYDGTVL 60 Query: 61 YGFNNKQERTLFKEL-IKTNGVGPKLALAILSGM--SAQQFVNAVEREEVGALVKLPGIG 117 YGF K+++ L+ G K AL L+ S F NA+ +++ L + G Sbjct: 61 YGFLTKEDKQLWAIFKTSIPNTGAKKALEYLNKALRSVADFHNAIVKKDPKILTGIFGFT 120 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KTAE+LI + + + P + +P E + AL ALGY P EA Sbjct: 121 AKTAEKLIHSLDGKMDAVTI-AGVPKIKIEGEAP-------FMSEVMMALTALGYSPMEA 172 Query: 178 SRMVSKIARP---DASSETLIREALR 200 + + ++ + + S E +IR ALR Sbjct: 173 RKAIDQLYKTGLANDSVENIIRAALR 198 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1QWF9 Holliday junction DNA helicase subunit RuvA n=4 ... 242 5e-63 UniRef50_A6VXD2 Holliday junction ATP-dependent DNA helicase ruv... 235 6e-61 UniRef50_Q0A5Q3 Holliday junction ATP-dependent DNA helicase ruv... 234 1e-60 UniRef50_Q483C5 Holliday junction ATP-dependent DNA helicase ruv... 234 1e-60 UniRef50_C6APE4 Holliday junction DNA helicase RuvA n=4 Tax=Gamm... 233 2e-60 UniRef50_A3DBU3 Holliday junction ATP-dependent DNA helicase ruv... 232 4e-60 UniRef50_Q5X5R9 Holliday junction ATP-dependent DNA helicase ruv... 232 6e-60 UniRef50_B5JXJ1 Holliday junction DNA helicase RuvA n=1 Tax=gamm... 230 3e-59 UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 T... 225 1e-57 UniRef50_A4EAI5 Putative uncharacterized protein n=1 Tax=Collins... 224 2e-57 UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veil... 222 5e-57 UniRef50_Q6F992 Holliday junction ATP-dependent DNA helicase ruv... 221 1e-56 UniRef50_C0GKF3 Holliday junction DNA helicase RuvA n=1 Tax=Deth... 220 2e-56 UniRef50_A9KNV9 Holliday junction ATP-dependent DNA helicase ruv... 220 2e-56 UniRef50_Q31H84 Holliday junction ATP-dependent DNA helicase ruv... 220 4e-56 UniRef50_C8QYM5 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 219 5e-56 UniRef50_D2QMR9 Holliday junction DNA helicase RuvA n=1 Tax=Spir... 219 6e-56 UniRef50_A5D3G0 Holliday junction resolvasome, DNA-binding subun... 218 9e-56 UniRef50_B9XLI7 Holliday junction DNA helicase RuvA n=3 Tax=Verr... 218 1e-55 UniRef50_C9LUM4 Holliday junction DNA helicase RuvA n=1 Tax=Sele... 218 1e-55 UniRef50_Q5P2U6 Holliday junction ATP-dependent DNA helicase ruv... 218 1e-55 UniRef50_A4J536 Holliday junction ATP-dependent DNA helicase ruv... 217 2e-55 UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruv... 216 3e-55 UniRef50_A6NV14 Putative uncharacterized protein n=2 Tax=Bacteri... 216 4e-55 UniRef50_A8PMB3 Holliday junction DNA helicase RuvA n=1 Tax=Rick... 216 4e-55 UniRef50_B2UKW6 Holliday junction DNA helicase RuvA n=1 Tax=Akke... 216 5e-55 UniRef50_C8W4C8 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 216 5e-55 UniRef50_A8S4H4 Putative uncharacterized protein n=1 Tax=Clostri... 215 6e-55 UniRef50_B5EAH2 Holliday junction ATP-dependent DNA helicase ruv... 215 7e-55 UniRef50_A4IY85 Holliday junction ATP-dependent DNA helicase ruv... 214 1e-54 UniRef50_C9KK52 Holliday junction DNA helicase RuvA n=1 Tax=Mits... 214 1e-54 UniRef50_C4Z030 Holliday junction ATP-dependent DNA helicase ruv... 214 1e-54 UniRef50_B6BW72 Holliday junction DNA helicase RuvA n=1 Tax=beta... 214 2e-54 UniRef50_Q67Q98 Holliday junction ATP-dependent DNA helicase ruv... 214 2e-54 UniRef50_Q6MFA5 Holliday junction ATP-dependent DNA helicase ruv... 214 2e-54 UniRef50_C4KD09 Holliday junction DNA helicase RuvA n=12 Tax=Bac... 213 2e-54 UniRef50_B7GYB6 Holliday junction ATP-dependent DNA helicase ruv... 213 2e-54 UniRef50_A6DHC9 Holliday junction DNA helicase motor protein n=1... 213 3e-54 UniRef50_B9ZJ99 Holliday junction DNA helicase RuvA n=1 Tax=Thio... 213 4e-54 UniRef50_C4V2G2 Crossover junction endodeoxyribonuclease n=1 Tax... 212 5e-54 UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-he... 212 5e-54 UniRef50_C2KW74 Possible crossover junction endonuclease RuvA n=... 212 6e-54 UniRef50_Q21HN5 Holliday junction ATP-dependent DNA helicase ruv... 212 6e-54 UniRef50_C0EG91 Putative uncharacterized protein (Fragment) n=1 ... 212 6e-54 UniRef50_Q3A231 Holliday junction ATP-dependent DNA helicase ruv... 212 6e-54 UniRef50_C0ZAN3 Holliday junction ATP-dependent DNA helicase ruv... 212 7e-54 UniRef50_B6GE75 Putative uncharacterized protein n=2 Tax=Collins... 211 8e-54 UniRef50_A0L4V9 Holliday junction ATP-dependent DNA helicase ruv... 211 9e-54 UniRef50_C6JAH0 Holliday junction DNA helicase RuvA n=1 Tax=Rumi... 211 1e-53 UniRef50_C2FZN8 Crossover junction endodeoxyribonuclease n=2 Tax... 211 1e-53 UniRef50_A8SPH1 Putative uncharacterized protein n=2 Tax=Clostri... 211 2e-53 UniRef50_UPI0001C37714 Holliday junction DNA helicase RuvA n=1 T... 211 2e-53 UniRef50_B0K955 Holliday junction ATP-dependent DNA helicase ruv... 210 2e-53 UniRef50_C8WQH8 Holliday junction DNA helicase RuvA n=2 Tax=Alic... 210 2e-53 UniRef50_Q0TP12 Holliday junction ATP-dependent DNA helicase ruv... 210 3e-53 UniRef50_C7N4C8 Holliday junction DNA helicase, RuvA subunit n=4... 210 4e-53 UniRef50_C0ES21 Putative uncharacterized protein n=1 Tax=Eubacte... 209 5e-53 UniRef50_Q2S5C8 Holliday junction ATP-dependent DNA helicase ruv... 209 6e-53 UniRef50_Q2W2A3 Holliday junction ATP-dependent DNA helicase ruv... 208 8e-53 UniRef50_B3QVA9 Holliday junction ATP-dependent DNA helicase ruv... 208 9e-53 UniRef50_Q6GG62 Holliday junction ATP-dependent DNA helicase ruv... 208 1e-52 UniRef50_Q3ATE5 Holliday junction ATP-dependent DNA helicase ruv... 208 1e-52 UniRef50_B5JGR2 Holliday junction DNA helicase RuvA n=1 Tax=Verr... 208 1e-52 UniRef50_B5IKU6 Holliday junction DNA helicase RuvA n=1 Tax=Cyan... 207 2e-52 UniRef50_Q11Z44 Holliday junction ATP-dependent DNA helicase ruv... 207 2e-52 UniRef50_C1SHM7 Holliday junction DNA helicase, RuvA subunit n=1... 206 3e-52 UniRef50_C4GBB6 Putative uncharacterized protein n=1 Tax=Shuttle... 206 5e-52 UniRef50_Q183P4 Holliday junction DNA helicase n=7 Tax=Clostridi... 206 5e-52 UniRef50_B1I477 Holliday junction ATP-dependent DNA helicase ruv... 205 6e-52 UniRef50_B4WL13 Holliday junction DNA helicase RuvA n=1 Tax=Syne... 205 7e-52 UniRef50_Q0W1R7 Holliday junction resolvasome, DNA-binding subun... 205 9e-52 UniRef50_A1UR85 Holliday junction ATP-dependent DNA helicase ruv... 204 1e-51 UniRef50_A4QEN4 Holliday junction ATP-dependent DNA helicase ruv... 204 2e-51 UniRef50_B2A5L5 Holliday junction ATP-dependent DNA helicase ruv... 203 3e-51 UniRef50_C1F8Z2 Holliday junction ATP-dependent DNA helicase ruv... 203 3e-51 UniRef50_A6TQM4 Holliday junction ATP-dependent DNA helicase ruv... 203 3e-51 UniRef50_C0WEE9 Holliday junction DNA helicase ruvA n=1 Tax=Acid... 203 4e-51 UniRef50_C4FZH5 Putative uncharacterized protein n=1 Tax=Abiotro... 202 6e-51 UniRef50_A7I4H5 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 202 7e-51 UniRef50_D0J979 Holliday junction DNA helicase motor protein n=2... 202 7e-51 UniRef50_C6P9B0 Holliday junction DNA helicase RuvA n=1 Tax=Ther... 202 8e-51 UniRef50_Q5NR75 Holliday junction ATP-dependent DNA helicase ruv... 201 8e-51 UniRef50_Q2JWZ2 Holliday junction ATP-dependent DNA helicase ruv... 201 9e-51 UniRef50_B1ZN17 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_Q2LRA9 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_A8FFR3 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_C7M5Z6 Holliday junction DNA helicase RuvA n=2 Tax=Capn... 201 1e-50 UniRef50_A5WFC8 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_Q3ZZK6 Holliday junction ATP-dependent DNA helicase ruv... 201 1e-50 UniRef50_C9LLE4 Holliday junction DNA helicase RuvA n=1 Tax=Dial... 200 2e-50 UniRef50_C7H8Z7 Holliday junction DNA helicase RuvA n=3 Tax=Rumi... 200 2e-50 UniRef50_C4XIJ9 Holliday junction ATP-dependent DNA helicase ruv... 200 2e-50 UniRef50_A1SJA6 Holliday junction ATP-dependent DNA helicase ruv... 199 3e-50 UniRef50_Q5I6C8 Holliday junction DNA helicase RuvA n=17 Tax=Bac... 199 3e-50 UniRef50_B3EU33 Holliday junction ATP-dependent DNA helicase ruv... 199 5e-50 UniRef50_C7NI46 Holliday junction DNA helicase subunit RuvA n=2 ... 199 6e-50 UniRef50_Q24UN6 Holliday junction ATP-dependent DNA helicase ruv... 198 7e-50 UniRef50_Q7NCU2 Holliday junction ATP-dependent DNA helicase ruv... 198 1e-49 UniRef50_Q0AX15 Holliday junction ATP-dependent DNA helicase ruv... 198 1e-49 UniRef50_Q2RVF6 Holliday junction ATP-dependent DNA helicase ruv... 198 1e-49 UniRef50_D1N374 Holliday junction DNA helicase RuvA n=1 Tax=Vict... 197 2e-49 UniRef50_C7MCB9 Holliday junction DNA helicase, RuvA subunit n=1... 197 2e-49 UniRef50_B8CXG3 Holliday junction ATP-dependent DNA helicase ruv... 197 2e-49 UniRef50_B2HN62 Holliday junction ATP-dependent DNA helicase ruv... 196 3e-49 UniRef50_Q8U9K5 Holliday junction ATP-dependent DNA helicase ruv... 196 5e-49 UniRef50_C4LIX8 Holliday junction ATP-dependent DNA helicase ruv... 195 7e-49 UniRef50_Q4L6Y7 Holliday junction ATP-dependent DNA helicase ruv... 195 7e-49 UniRef50_C6X0H6 Holliday junction DNA helicase RuvA n=1 Tax=Flav... 195 8e-49 UniRef50_Q1Q054 Strongly similar to DNA helicase RuvA n=1 Tax=Ca... 195 8e-49 UniRef50_Q5L9Q7 Holliday junction ATP-dependent DNA helicase ruv... 195 9e-49 UniRef50_C0W3R8 Crossover junction endodeoxyribonuclease n=1 Tax... 194 1e-48 UniRef50_A0JXB2 Holliday junction ATP-dependent DNA helicase ruv... 194 1e-48 UniRef50_C6C065 Holliday junction ATP-dependent DNA helicase ruv... 194 1e-48 UniRef50_C0GT45 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 194 1e-48 UniRef50_B2RJ07 Holliday junction ATP-dependent DNA helicase ruv... 194 2e-48 UniRef50_B1W3G3 Holliday junction ATP-dependent DNA helicase ruv... 194 2e-48 UniRef50_Q5FQC5 Holliday junction ATP-dependent DNA helicase ruv... 193 2e-48 UniRef50_C3J9S7 Holliday junction DNA helicase RuvA n=2 Tax=Bact... 193 2e-48 UniRef50_B3DZD2 Holliday junction resolvasome, DNA-binding subun... 193 3e-48 UniRef50_Q0F2I8 Putative Holliday junction DNA helicase RuvA n=1... 193 3e-48 UniRef50_C8NUB4 Holliday junction DNA helicase RuvA n=1 Tax=Cory... 193 3e-48 UniRef50_C2D6U7 Crossover junction endonuclease RuvA n=1 Tax=Ato... 193 3e-48 UniRef50_D1CDK2 Holliday junction DNA helicase RuvA n=1 Tax=Ther... 193 3e-48 UniRef50_B5XJ07 Holliday junction ATP-dependent DNA helicase ruv... 193 4e-48 UniRef50_Q4JVD8 Holliday junction ATP-dependent DNA helicase ruv... 193 4e-48 UniRef50_C7GZ09 Holliday junction DNA helicase RuvA n=1 Tax=Euba... 193 4e-48 UniRef50_C7RHH1 Holliday junction DNA helicase RuvA n=5 Tax=Anae... 193 4e-48 UniRef50_B2GB19 Holliday junction ATP-dependent DNA helicase ruv... 193 5e-48 UniRef50_Q6A8K8 Holliday junction ATP-dependent DNA helicase ruv... 192 5e-48 UniRef50_C6XF74 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 192 5e-48 UniRef50_Q729U3 Holliday junction ATP-dependent DNA helicase ruv... 192 6e-48 UniRef50_D2RLD5 Holliday junction DNA helicase RuvA n=1 Tax=Acid... 192 6e-48 UniRef50_UPI000050F77A Holliday junction DNA helicase, RuvA subu... 191 1e-47 UniRef50_A5CX58 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 191 1e-47 UniRef50_C5VM52 Holliday junction DNA helicase RuvA n=5 Tax=Bact... 191 1e-47 UniRef50_B3DRX9 Holliday junction ATP-dependent DNA helicase ruv... 191 1e-47 UniRef50_B8DNJ8 Holliday junction ATP-dependent DNA helicase ruv... 191 2e-47 UniRef50_B0NYV4 Putative uncharacterized protein n=2 Tax=Clostri... 191 2e-47 UniRef50_B0S1J4 Holliday junction ATP-dependent DNA helicase ruv... 191 2e-47 UniRef50_C1A615 Holliday junction ATP-dependent DNA helicase ruv... 190 2e-47 UniRef50_A0LUK6 Holliday junction ATP-dependent DNA helicase ruv... 190 2e-47 UniRef50_B8J094 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 190 3e-47 UniRef50_Q3ABX9 Holliday junction ATP-dependent DNA helicase ruv... 190 3e-47 UniRef50_C9RMJ7 Holliday junction DNA helicase RuvA n=1 Tax=Fibr... 190 3e-47 UniRef50_Q252Y0 Holliday junction ATP-dependent DNA helicase ruv... 189 3e-47 UniRef50_D1C4E7 Holliday junction DNA helicase RuvA n=1 Tax=Spha... 189 3e-47 UniRef50_B1MCJ1 Holliday junction ATP-dependent DNA helicase ruv... 189 4e-47 UniRef50_Q1AWE1 Holliday junction ATP-dependent DNA helicase ruv... 189 4e-47 UniRef50_B0VHI7 Holliday junction DNA helicase RuvA n=1 Tax=Cand... 189 4e-47 UniRef50_Q6MKB7 Holliday junction ATP-dependent DNA helicase ruv... 189 4e-47 UniRef50_B7K970 Holliday junction ATP-dependent DNA helicase ruv... 189 4e-47 UniRef50_A8RC90 Putative uncharacterized protein n=3 Tax=Erysipe... 189 5e-47 UniRef50_A8YTI1 Holliday junction ATP-dependent DNA helicase ruv... 189 6e-47 UniRef50_D1PT53 Crossover junction endoribonuclease subunit A n=... 188 7e-47 UniRef50_C8W783 Holliday junction DNA helicase RuvA n=2 Tax=Atop... 188 7e-47 UniRef50_C0W1Q3 Possible crossover junction endodeoxyribonucleas... 188 8e-47 UniRef50_B0TF69 Holliday junction DNA helicase ruva n=1 Tax=Heli... 188 1e-46 UniRef50_B6YR38 Holliday junction ATP-dependent DNA helicase ruv... 188 1e-46 UniRef50_B6XV05 Putative uncharacterized protein n=2 Tax=Bifidob... 188 1e-46 UniRef50_A5UZS3 Holliday junction ATP-dependent DNA helicase ruv... 188 1e-46 UniRef50_D0LZE6 Holliday junction DNA helicase RuvA n=1 Tax=Hali... 188 1e-46 UniRef50_A5GTL6 Holliday junction ATP-dependent DNA helicase ruv... 187 2e-46 UniRef50_A5CEJ4 Holliday junction ATP-dependent DNA helicase ruv... 187 2e-46 UniRef50_C1D1T9 Putative Holliday junction ATP-dependent DNA hel... 187 2e-46 UniRef50_B8ZUI1 Holliday junction ATP-dependent DNA helicase ruv... 186 3e-46 UniRef50_Q0ALX8 Holliday junction ATP-dependent DNA helicase ruv... 186 4e-46 UniRef50_UPI000196B988 hypothetical protein CATMIT_00479 n=1 Tax... 186 6e-46 UniRef50_A8LHP9 Holliday junction ATP-dependent DNA helicase ruv... 185 8e-46 UniRef50_A8SLR3 Putative uncharacterized protein n=1 Tax=Parvimo... 184 1e-45 UniRef50_C0ABP1 Holliday junction resolvasome DNA-binding subuni... 184 2e-45 UniRef50_A9GQJ8 Holliday junction DNA helicase n=1 Tax=Sorangium... 183 2e-45 UniRef50_B1C6M7 Putative uncharacterized protein n=1 Tax=Anaerof... 183 2e-45 UniRef50_C3RKD6 Holliday junction DNA helicase subunit RuvA n=3 ... 183 3e-45 UniRef50_A5EXH7 Holliday junction ATP-dependent DNA helicase ruv... 183 3e-45 UniRef50_Q2FPZ9 Holliday junction DNA helicase RuvA n=1 Tax=Meth... 183 4e-45 UniRef50_A9NF61 Holliday junction ATP-dependent DNA helicase ruv... 183 4e-45 UniRef50_D0GJ52 Holliday junction DNA helicase RuvA n=1 Tax=Lept... 183 4e-45 UniRef50_C7LQQ8 Holliday junction DNA helicase RuvA n=1 Tax=Desu... 183 5e-45 UniRef50_Q7V7T9 Holliday junction ATP-dependent DNA helicase ruv... 182 5e-45 UniRef50_D1VUW2 Holliday junction DNA helicase RuvA n=1 Tax=Pept... 182 6e-45 UniRef50_A3CR11 Holliday junction ATP-dependent DNA helicase ruv... 182 7e-45 UniRef50_Q1GE12 Holliday junction DNA helicase RuvA n=12 Tax=Rho... 182 7e-45 UniRef50_Q8YZT2 Holliday junction ATP-dependent DNA helicase ruv... 181 9e-45 UniRef50_B4R9Z1 Holliday junction ATP-dependent DNA helicase ruv... 181 1e-44 UniRef50_UPI000038343B COG0632: Holliday junction resolvasome, D... 181 1e-44 UniRef50_C0QZY1 Holliday junction DNA helicase RuvA n=1 Tax=Brac... 181 1e-44 UniRef50_B1X417 Putative holliday junction DNA helicase RuvA n=1... 181 1e-44 UniRef50_B5YKF0 Holliday junction ATP-dependent DNA helicase ruv... 181 2e-44 UniRef50_C7LZI9 Holliday junction DNA helicase RuvA n=1 Tax=Acid... 181 2e-44 UniRef50_Q30R94 Holliday junction ATP-dependent DNA helicase ruv... 181 2e-44 UniRef50_C2BWM5 Holliday junction DNA helicase motor protein n=3... 180 2e-44 UniRef50_B9KYT2 Holliday junction ATP-dependent DNA helicase ruv... 180 2e-44 UniRef50_C8NZK0 Holliday junction DNA helicase RuvA n=1 Tax=Erys... 180 2e-44 UniRef50_P73554 Holliday junction ATP-dependent DNA helicase ruv... 180 3e-44 UniRef50_C0YLR6 Crossover junction endonuclease RuvA n=1 Tax=Chr... 180 3e-44 UniRef50_C9MZD4 Holliday junction DNA helicase RuvA n=1 Tax=Lept... 180 3e-44 UniRef50_Q1D2J5 Holliday junction ATP-dependent DNA helicase ruv... 179 3e-44 UniRef50_C1Q8J8 Holliday junction DNA helicase subunit RuvA n=1 ... 179 4e-44 UniRef50_C7NC64 Holliday junction DNA helicase RuvA n=2 Tax=Fuso... 179 5e-44 UniRef50_B2GIL9 Holliday junction ATP-dependent DNA helicase ruv... 179 6e-44 UniRef50_C5EYK8 Holliday junction ATP-dependent DNA helicase ruv... 178 7e-44 UniRef50_C3WBK1 Holliday junction DNA helicase ruvA n=1 Tax=Fuso... 178 7e-44 UniRef50_A3VP65 Holliday junction DNA helicase RuvA n=1 Tax=Parv... 178 8e-44 UniRef50_Q83GK0 Holliday junction ATP-dependent DNA helicase ruv... 178 8e-44 UniRef50_C6JI67 Holliday junction DNA helicase ruvA n=5 Tax=Fuso... 178 1e-43 UniRef50_C3XJP3 Holliday junction DNA helicase motor protein n=1... 177 2e-43 UniRef50_Q1J0F6 Holliday junction ATP-dependent DNA helicase ruv... 177 2e-43 UniRef50_C9M7E3 Holliday junction DNA helicase RuvA n=1 Tax=Jonq... 177 2e-43 UniRef50_Q8REJ7 Holliday junction ATP-dependent DNA helicase ruv... 176 4e-43 UniRef50_A9B9X1 Holliday junction ATP-dependent DNA helicase ruv... 176 6e-43 UniRef50_UPI00016C0EB8 Holliday junction DNA helicase RuvA n=1 T... 175 6e-43 UniRef50_D2MP66 Holliday junction DNA helicase RuvA n=1 Tax=Bull... 175 6e-43 UniRef50_C9R8U6 Holliday junction DNA helicase RuvA n=1 Tax=Ammo... 175 7e-43 UniRef50_D1AXU1 Holliday junction DNA helicase RuvA n=1 Tax=Stre... 175 9e-43 UniRef50_A7VWM3 Putative uncharacterized protein n=1 Tax=Clostri... 174 1e-42 UniRef50_B9L9P0 Holliday junction ATP-dependent DNA helicase ruv... 174 2e-42 UniRef50_A5IKQ6 Holliday junction ATP-dependent DNA helicase ruv... 173 3e-42 UniRef50_A6Q8H2 Holliday junction ATP-dependent DNA helicase ruv... 173 4e-42 UniRef50_B2S3D5 Holliday junction ATP-dependent DNA helicase ruv... 172 7e-42 UniRef50_A5CS07 Holliday junction ATP-dependent DNA helicase ruv... 172 7e-42 UniRef50_A5KTE9 Holliday junction DNA helicase RuvA n=2 Tax=cand... 171 1e-41 UniRef50_Q2RHT6 Holliday junction ATP-dependent DNA helicase ruv... 171 2e-41 UniRef50_C1XYW5 Holliday junction DNA helicase subunit RuvA n=1 ... 171 2e-41 UniRef50_UPI000038462D COG0632: Holliday junction resolvasome, D... 170 2e-41 UniRef50_C7TAK4 Holliday junction DNA helicase RuvA n=9 Tax=Lact... 170 3e-41 UniRef50_A8UZA0 Holliday junction resolvasome DNA-binding subuni... 169 5e-41 UniRef50_C0VVS8 Holliday junction DNA helicase motor protein n=2... 169 6e-41 UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruv... 168 8e-41 UniRef50_Q7U7F0 Holliday junction ATP-dependent DNA helicase ruv... 168 9e-41 UniRef50_B8H455 Holliday junction ATP-dependent DNA helicase ruv... 167 2e-40 UniRef50_A0RP49 Holliday junction ATP-dependent DNA helicase ruv... 167 3e-40 UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1... 165 6e-40 UniRef50_D1Y1N8 Holliday junction ATP-dependent DNA helicase Ruv... 165 1e-39 UniRef50_A4XJS2 Holliday junction ATP-dependent DNA helicase ruv... 165 1e-39 UniRef50_A6GER9 Holliday junction DNA helicase motor protein n=1... 164 1e-39 UniRef50_C1TMQ3 Holliday junction DNA helicase, RuvA subunit n=1... 164 2e-39 UniRef50_C1DXL3 Holliday junction DNA helicase RuvA n=3 Tax=Sulf... 163 3e-39 UniRef50_Q7VCI6 Holliday junction ATP-dependent DNA helicase ruv... 163 3e-39 UniRef50_UPI0001C338F3 Holliday junction DNA helicase, RuvA subu... 163 5e-39 UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae... 162 8e-39 UniRef50_B0PAT7 Putative uncharacterized protein n=1 Tax=Anaerot... 161 1e-38 UniRef50_Q03B18 Holliday junction ATP-dependent DNA helicase ruv... 161 1e-38 UniRef50_Q5GT34 Holliday junction ATP-dependent DNA helicase ruv... 160 3e-38 UniRef50_C0QRQ4 Holliday junction DNA helicase RuvA n=1 Tax=Pers... 159 5e-38 UniRef50_UPI0001C31CBF Holliday junction DNA helicase RuvA n=1 T... 157 2e-37 UniRef50_Q98PR2 Holliday junction ATP-dependent DNA helicase ruv... 157 2e-37 UniRef50_C3XDN4 Holliday junction DNA helicase motor protein n=1... 156 4e-37 UniRef50_Q4A7W5 Holliday junction ATP-dependent DNA helicase ruv... 156 6e-37 UniRef50_A7HL71 Holliday junction ATP-dependent DNA helicase ruv... 154 1e-36 UniRef50_A4AJX1 Holliday junction DNA helicase n=1 Tax=marine ac... 154 2e-36 Sequences not found previously or not previously below threshold: >UniRef50_Q1QWF9 Holliday junction DNA helicase subunit RuvA n=4 Tax=Proteobacteria RepID=Q1QWF9_CHRSD Length = 206 Score = 242 bits (618), Expect = 5e-63, Method: Composition-based stats. Identities = 106/199 (53%), Positives = 135/199 (67%), Gaps = 1/199 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG ++EKQPP ++++VGGVGYE+ MT LP G+E + TH VREDA LL Sbjct: 3 MIGRLRGTLLEKQPPWIVVDVGGVGYELETSMTTLLALPGPGEEVQLHTHLAVREDAHLL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ER LF+ LIK NGVGPKLALAILSGM + F+ V +++ AL +LPG+GKKT Sbjct: 63 YGFARGDERQLFRALIKVNGVGPKLALAILSGMDQEAFIRCVMEDDIKALTRLPGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VEM+DRF + L L + + A D + +A +ALVALGYKP EASRM Sbjct: 123 AERLVVEMRDRFPHWQLEQENGLHALELGASPTTAAPDPQADAESALVALGYKPTEASRM 182 Query: 181 VSKIARPDASSETLIREAL 199 +S + S+E LI+ AL Sbjct: 183 LSGL-DDGLSTEGLIKAAL 200 >UniRef50_A6VXD2 Holliday junction ATP-dependent DNA helicase ruvA n=30 Tax=Proteobacteria RepID=RUVA_MARMS Length = 200 Score = 235 bits (601), Expect = 6e-61, Method: Composition-based stats. Identities = 94/203 (46%), Positives = 138/203 (67%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ G +IEK PP ++++V G+GYEV MT Y+LP+ G + +FTH +V+ED+ L Sbjct: 1 MIGRIVGTLIEKTPPELMVDVNGIGYEVSASMTTIYDLPQIGGQVTLFTHLLVKEDSHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K ER LF+ LIK NG+GPK+ALAILS MS+++ + V+ +V AL ++PG+GKKT Sbjct: 61 YGFIDKNERALFRVLIKVNGIGPKMALAILSSMSSEELITNVQESDVTALTRIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLI+E++D+ A ++ A P QEA AAL++LGYKPQEA++ Sbjct: 121 AERLIIELRDKLGQAAKTDLFSAPAVLRQVQADP-----RQEAEAALISLGYKPQEAAKA 175 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ + A+SE +I+ AL+ L Sbjct: 176 IAGVPVDAANSEDVIKAALKGML 198 >UniRef50_Q0A5Q3 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Proteobacteria RepID=RUVA_ALHEH Length = 208 Score = 234 bits (598), Expect = 1e-60, Method: Composition-based stats. Identities = 101/207 (48%), Positives = 137/207 (66%), Gaps = 4/207 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G + E+ PP +L++VGGVGYE+ PM+ FY LP Q ++TH VR+D Q L Sbjct: 1 MIGRLHGTVAERHPPALLLDVGGVGYELEAPMSTFYALPAGDQAVTLWTHLAVRDDGQAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ER LF+ LI+ +GVGPKLALA+LSGM+A+ +ERE+V L +LPG+G+KT Sbjct: 61 YGFASRAERDLFRVLIRISGVGPKLALALLSGMNAEGLQRCIEREDVATLTRLPGVGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTS---PASPATDDAEQEAVAALVALGYKPQEA 177 A+RLIVE++DR GL + A + ++AV+ALVALGYKP EA Sbjct: 121 AQRLIVELRDRLDGLLPAASGGVPARTGSGEQLDAPAGPQGSREDAVSALVALGYKPAEA 180 Query: 178 SRMVSKIAR-PDASSETLIREALRAAL 203 R+V+ + D SE LIR AL+AA+ Sbjct: 181 GRLVNAVPGANDLPSEELIRRALQAAV 207 >UniRef50_Q483C5 Holliday junction ATP-dependent DNA helicase ruvA n=346 Tax=Gammaproteobacteria RepID=RUVA_COLP3 Length = 211 Score = 234 bits (597), Expect = 1e-60, Method: Composition-based stats. Identities = 111/211 (52%), Positives = 144/211 (68%), Gaps = 8/211 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG+++EK P +LIE GVGYEV MPMT Y LPE Q+A ++THFVVREDAQLL Sbjct: 1 MIGRLRGMLVEKNSPEILIECAGVGYEVTMPMTSIYALPELEQQATIYTHFVVREDAQLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK ER LF+ LIK NGVGPKLALAILS MSA QFV+ V +++ A+VK+PG+GKKT Sbjct: 61 YGFANKVERKLFRLLIKVNGVGPKLALAILSNMSADQFVSCVRHDDISAIVKIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHG--------DLFTPAADLVLTSPASPATDDAEQEAVAALVALGY 172 AERL++EM+DR K D P S + +D + +A+ AL++LGY Sbjct: 121 AERLLIEMRDRLKDWQAQQIHLVSDDGVIPEQLSAELSQETTFVNDNKGDAINALLSLGY 180 Query: 173 KPQEASRMVSKIARPDASSETLIREALRAAL 203 K +A + V + SSE +IR+AL++ + Sbjct: 181 KQVQADKAVKSVYNRGMSSENIIRDALKSMI 211 >UniRef50_C6APE4 Holliday junction DNA helicase RuvA n=4 Tax=Gammaproteobacteria RepID=C6APE4_AGGAN Length = 204 Score = 233 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 124/204 (60%), Positives = 157/204 (76%), Gaps = 1/204 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L GI++EKQPP +L++V GVGYE+ +PMT FY LPE G++ +FTH VVREDA LL Sbjct: 1 MIGHLTGILMEKQPPEILLDVQGVGYELLLPMTSFYNLPEVGKQTSLFTHLVVREDAHLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+ K +RTLF+ELIKTNGVGPKLALAILS MS +F A+EREE+ LVK+PGIGKKT Sbjct: 61 FGFSQKTDRTLFRELIKTNGVGPKLALAILSAMSVDEFAYAIEREELSRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AERL+VE+K +FK + D F L + + AT + EAVAAL+ALGYKP +A + Sbjct: 121 AERLLVELKGKFKEVKTHDFFVQGDHLPSVNAETVATIEPSNEAVAALIALGYKPLDAEK 180 Query: 180 MVSKIARPDASSETLIREALRAAL 203 MV K+++P+ SSE LIREAL+AAL Sbjct: 181 MVKKVSKPELSSEQLIREALKAAL 204 >UniRef50_A3DBU3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Clostridium RepID=RUVA_CLOTH Length = 202 Score = 232 bits (593), Expect = 4e-60, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 3/201 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG + K +++E GVGY + ++ + E GQE V+T+ VRED L Sbjct: 1 MFAYIRGRLEYKNNDFLIVESNGVGYRIFTSLSTISGIGEIGQEVKVYTYLYVREDVISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E +F+ LI +GVGPK A+++LS +S +F AV ++V L K GIGKK Sbjct: 61 YGFLTQEELNVFELLISVSGVGPKAAVSVLSAISPSRFSLAVITDDVKTLTKAQGIGKKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K + + + EAV+AL+ LGY P EA++ Sbjct: 121 AQRIILELKDKIKKEQLTEYAQSEEG---GKVLDTDSSKMAEAVSALMVLGYSPAEANKA 177 Query: 181 VSKIARPDASSETLIREALRA 201 VS + R D ET+I+ AL+ Sbjct: 178 VSAVYREDMDIETIIKNALKG 198 >UniRef50_Q5X5R9 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Legionella RepID=RUVA_LEGPA Length = 199 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 95/201 (47%), Positives = 132/201 (65%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEK-QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G II+K QP ++++V GVGY+V + F+++ Q + H +VREDA L Sbjct: 1 MIGWLHGQIIDKHQPGKLVLDVNGVGYDVETSLNTFFQIENGNQPIGLHIHTIVREDALL 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +K+ER+LF+ LIK NGVGPKLA+ +LS +S ++F+ + +E L KLPGIGKK Sbjct: 61 LYGFLDKEERSLFRSLIKVNGVGPKLAMTVLSSISPKEFIQCIHQENAALLTKLPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERL+VEM+D K G + ++ + QEA++AL ALGYKPQEA + Sbjct: 121 TAERLVVEMRDSIKQFDGSVSDTFQKQAGSTHSQ-------QEAISALEALGYKPQEAWK 173 Query: 180 MVSKIARPDASSETLIREALR 200 +V+KI + S E LIREAL+ Sbjct: 174 VVNKIDNGNKSCEQLIREALQ 194 >UniRef50_B5JXJ1 Holliday junction DNA helicase RuvA n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXJ1_9GAMM Length = 205 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 99/203 (48%), Positives = 129/203 (63%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G +I KQ P +L++V GVGYEV P++ +ELP GQ +V H VREDA L Sbjct: 1 MIGRLSGTLISKQAPHLLVDVNGVGYEVEAPLSTVFELPAEGQAVVVLIHTHVREDAIQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 + F ER F+ LIK NGVG K+ALAI+SG SA+ F V++E+ AL KLPG+GKKT Sbjct: 61 FAFGTDIERRFFRSLIKINGVGAKMALAIMSGASAETFAQWVDQEDTAALTKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++EM+DR P+ S + A E EAVAAL LGY+ EA +M Sbjct: 121 AERLVIEMRDRLDKEVFMGAVPSLPKAGVSATASAPMSREDEAVAALEGLGYRAAEARKM 180 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+K+A+ D +E +IR AL+ L Sbjct: 181 VAKVAQDDLPTEEMIRLALQQTL 203 >UniRef50_UPI0001BCCB68 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas noxia ATCC 43541 RepID=UPI0001BCCB68 Length = 200 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 5/199 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + P ++V VGY V + L G+E +++ H VREDA LL Sbjct: 1 MIGFLRGKVTYTFPDYCFLDVHDVGYRVFVSHQTRNHL-SVGEEVMLYIHTHVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF+ LI +G+GPK+A ILS ++A +F + +++V A+ KLPGIGKKT Sbjct: 60 YGFFSQEEYDLFQHLIGISGIGPKVAQGILSAITANEFYRLIHQKDVKAITKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ F + + + + D EA AL+ LG+ E + Sbjct: 120 AERIILELKDKL---TSSSFDDDSFADHAAGFADSMGDKISEATEALLNLGFGQSEIQSV 176 Query: 181 VSKIARPDASSETLIREAL 199 + K + S+E +IR AL Sbjct: 177 LKKKMDWE-STEEIIRYAL 194 >UniRef50_A4EAI5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI5_9ACTN Length = 206 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 113/200 (56%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L G ++E +++V GVG+E+ + + LP G E ++T VREDA L Sbjct: 1 MISQLHGTLVEATMSSAVVDVSGVGFELGISGSTAATLPTPGGEVRLYTRMQVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K ERT+F L+ +GVGP+LALA+LS + Q + V E+ + K+PG+GKKT Sbjct: 61 FGFASKDERTMFDRLVSVSGVGPRLALAVLSTYTVGQLYSLVMAEDDKGMAKVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K F G + A + P A A +A AAL+++G+ PQE Sbjct: 121 AQRLILELKSTFAKDKGFVPVDAIPGQVAMPVPAAAPSAIDDARAALLSMGFSPQETDVA 180 Query: 181 VSKIARPDASSETLIREALR 200 +S D E L+ AL+ Sbjct: 181 LSGYDGQDMRVEDLLGAALK 200 >UniRef50_D1BLL7 Holliday junction DNA helicase RuvA n=3 Tax=Veillonella RepID=D1BLL7_VEIPT Length = 202 Score = 222 bits (567), Expect = 5e-57, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 112/199 (56%), Gaps = 4/199 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG +RGI+ ++V GVGY V++P T +L E G EA +FT+ VREDA L Sbjct: 1 MIGYVRGIVTHLFKESCYVDVHGVGYRVYVPTTTRQQLTE-GHEATLFTYLNVREDAMQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF LI +G+GPK+ L ILSGM+ + F A+ +V L KLPGIGKK+ Sbjct: 60 YGFWTEEEYELFILLISVSGIGPKVGLGILSGMTPEAFKLAIINGQVQQLTKLPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+KD+ + A P A EA+ ALV+LGY ++ + + Sbjct: 120 AERLVLELKDKIAKMTH---ISAESPAAIQPIGVTASGAAGEAIEALVSLGYSERDVADI 176 Query: 181 VSKIARPDASSETLIREAL 199 V + LI+ +L Sbjct: 177 VESLDDGKRDVSELIKVSL 195 >UniRef50_Q6F992 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Acinetobacter sp. ADP1 RepID=RUVA_ACIAD Length = 201 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 86/203 (42%), Positives = 133/203 (65%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + P VL+ V GVGYE+ P++ F +L + GQ ++TH VVREDAQ L Sbjct: 1 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQL-QKGQHVTLWTHLVVREDAQQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + QE+ +F+ L+K NGVGPK+AL ILS +S + F++ +E +++ L+K+PG+G+KT Sbjct: 60 YGFIDAQEKLIFRTLLKVNGVGPKMALGILSTLSIELFIHTIEHDDINTLIKVPGVGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++DRFK L + V ++ +++ EA AAL +LGYKP EA + Sbjct: 120 AERLMIELRDRFKAL--SVQATTGSTVTSAQIQFSSNSPIAEAEAALQSLGYKPIEAQKA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ + + LIR AL++ + Sbjct: 178 IAAVKADYTEAADLIRAALKSMM 200 >UniRef50_C0GKF3 Holliday junction DNA helicase RuvA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKF3_9FIRM Length = 200 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 7/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG +++K V+++ G+G+++ +P T L +E +FT+ VRED L Sbjct: 1 MFNYIRGTLVQKGKDTVVLDNQGIGWQISVPSTVLSGLHSLDEEVKLFTYLAVREDDLHL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +LFK LI +G+GPK AL ILS +SA +F AV E V AL ++PG+G K+ Sbjct: 61 YGFLTADDLSLFKLLISVSGIGPKAALGILSSLSAAEFHLAVMHENVKALTRVPGVGPKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+K++ L V +P + T A +A+ ALVALGY EA Sbjct: 121 AKRLIVELKEKVAALG------TPQTVSATPQAGGTTSAYHDALEALVALGYNGSEAQAA 174 Query: 181 VSKIARPD-ASSETLIREAL 199 + I D S+E LI++AL Sbjct: 175 LQTIEDADRLSTEELIKKAL 194 >UniRef50_A9KNV9 Holliday junction ATP-dependent DNA helicase ruvA n=35 Tax=Bacteria RepID=RUVA_CLOPH Length = 203 Score = 220 bits (561), Expect = 2e-56, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 1/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G + E + V+++ G+GYE+ +P T LP G + T+ VRED L Sbjct: 1 MLAFIQGELAEVKENYVVVDNNGMGYEIFIPHTVHSYLPAIGDKVKFHTYLQVREDGMAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF N+++ +FK LI NG+GPK A+ ILS +S AV E+V A+ K PGIG KT Sbjct: 61 FGFLNREDLAMFKLLITVNGIGPKGAIGILSAISTDDLRFAVLAEDVKAISKAPGIGTKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +LI+E+KD+FK T ++ V+++ D +EA+ ALVALGY +A + Sbjct: 121 ASKLILELKDKFKLEDAFEATFQSNQVISTGGKGNNDGIREEAIQALVALGYSATDALKA 180 Query: 181 VSKIARP-DASSETLIREALR 200 V + + +SE +++ +LR Sbjct: 181 VKAVEITSNMTSEDVLKFSLR 201 >UniRef50_Q31H84 Holliday junction ATP-dependent DNA helicase ruvA n=7 Tax=Gammaproteobacteria RepID=RUVA_THICR Length = 200 Score = 220 bits (560), Expect = 4e-56, Method: Composition-based stats. Identities = 94/202 (46%), Positives = 130/202 (64%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + K PP +LI V GVGYEV PM+ FY + E G E ++ TH VREDA LL Sbjct: 1 MIGFLSGTLHAKLPPQILINVNGVGYEVEAPMSTFYAIGEVGDEVMLLTHMHVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ ER+LFKELIK NG+G K+A+ ILS MS FV V+ + AL K+PG+GKKT Sbjct: 61 FGFASELERSLFKELIKVNGIGAKMAIGILSAMSVNDFVGLVDVGDAPALTKIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++EM+DR KG ++++ + S A + + AV AL++LGYK +A +M Sbjct: 121 AERLVIEMRDRLKGWGNGA---SSNVSSKTMVSSAPHNQKASAVEALISLGYKTAQADKM 177 Query: 181 VSKIARPDASSETLIREALRAA 202 V + S E I++AL++ Sbjct: 178 VQAVES-GLSLEETIKKALQSV 198 >UniRef50_C8QYM5 Holliday junction DNA helicase RuvA n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYM5_9DELT Length = 215 Score = 219 bits (558), Expect = 5e-56, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 12/213 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + K P ++++VGGVGYEV +P + LP G+E ++ VVRED+ L Sbjct: 1 MIASLQGKLAHKGPDSLVLQVGGVGYEVFLPASRHDRLPAVGEELFLYIQTVVREDSFNL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +E+ +F+ L+ +GVGP+LA+ IL+ A+ ++ L KLPG+GKKT Sbjct: 61 YGFPDSREKRMFQLLLGVSGVGPRLAMNILAAAEPAALSRAIIAGDIVFLKKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQ-------EAVAALVALGYK 173 AERL +E+ D+ + + + SP++ A +A +AL+ LGY Sbjct: 121 AERLCLELGDKMEFFPTATTDAGTVVGPGAALSPSSAAAADFNEPSFQDAYSALLNLGYP 180 Query: 174 PQEASRMVSKIARP-----DASSETLIREALRA 201 +A + + + E L+R+ALR+ Sbjct: 181 ASQARAALEGLRSAADVSLELPVEELLRQALRS 213 >UniRef50_D2QMR9 Holliday junction DNA helicase RuvA n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QMR9_9SPHI Length = 198 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + K+ V+I+V GVGY VH+ + + LP G +F H + RED+Q L Sbjct: 1 MIAYLDGTLSHKEATHVIIDVHGVGYSVHISLQTYAVLPGGGDRIKLFIHHLFREDSQSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF N E++LF +LI +GVGP AL +LS M A+ E V A+ + GIG KT Sbjct: 61 YGFANADEKSLFLDLIGVSGVGPNTALGMLSAMQPGDLRLAILGENVRAVQAIKGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++D+ K P+ A + +E++AALVALG+ A + Sbjct: 121 AQRIILELRDKMKRAGVVPDGPSY------RQQAAANPVREESLAALVALGFPKPTAEKS 174 Query: 181 VSKIARPD--ASSETLIREALR 200 V + D S E +IR ALR Sbjct: 175 VDDALKADPALSVEDVIRRALR 196 >UniRef50_A5D3G0 Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D3G0_PELTS Length = 211 Score = 218 bits (556), Expect = 9e-56, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 117/205 (57%), Gaps = 13/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + E Q V+++VGG+GY V +P++ +LP G++ +++TH VRE+ L Sbjct: 16 MISYIKGKLAEVQAGAVVLDVGGIGYRVQVPLSVLNKLPARGEDVLLYTHLAVREEGFFL 75 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+++ E F +L+ +G+GPK+ALAIL+ S + + + AL ++PG+GKKT Sbjct: 76 YGFSDQNELGFFLKLLGVSGIGPKVALAILTIFSPDELGRIIIGGDTAALTRVPGVGKKT 135 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ + + E +AV AL ALGY EA + Sbjct: 136 AGRIILELKDKVTETTLEREPLSGR-----------SGVEADAVEALEALGYTAAEALKA 184 Query: 181 VSKIAR--PDASSETLIREALRAAL 203 V ++ + S+ ++REALR + Sbjct: 185 VKEVLKGPGQPSAAEIVREALRLLV 209 >UniRef50_B9XLI7 Holliday junction DNA helicase RuvA n=3 Tax=Verrucomicrobia RepID=B9XLI7_9BACT Length = 201 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 115/205 (56%), Gaps = 10/205 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++E P V ++V GVGYEV +P++ F +LP+ G E + TH +REDA +L Sbjct: 1 MINFLHGKLVEALPTQVTVDVNGVGYEVLIPLSSFDKLPQPGGEVKLLTHLAIREDAHVL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF ER +F+ L+ G+GPKLAL ILSGM+ AV +V +L ++ G+GKK Sbjct: 61 YGFMTAGEREMFRLLMNTVTGIGPKLALNILSGMNVTMLRGAVSNGDVKSLSQISGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAER++VE+KD+ A + D +AV AL+ALG+K EA Sbjct: 121 TAERIVVELKDKMGAAGAWEAASAQRSLSE------PDQRVNDAVLALMALGFKQPEAHD 174 Query: 180 MVSK---IARPDASSETLIREALRA 201 V + A+ E L+R +L+ Sbjct: 175 TVRSAQVLLGQQATVEDLVRASLKK 199 >UniRef50_C9LUM4 Holliday junction DNA helicase RuvA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUM4_9FIRM Length = 201 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 5/200 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + ++V GVGY V + L G+E +FTH VREDA L Sbjct: 1 MIGFLRGKVARLSLDFCFLDVAGVGYRVFISGATHGRL-HMGEEVTLFTHLAVREDAMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF+ LI G+GPK AL ILS ++ + AV ++ L K PGIGKK+ Sbjct: 60 YGFFSEEEYELFQMLISVTGIGPKAALGILSNITPENLCLAVRNKKADILTKAPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ KG + + +L P D EA AAL++LGY E + + Sbjct: 120 AERIILELKDKMKGFMTEHEAIVEEGLL---EEPVEDTMLAEAGAALLSLGYTQAEFTPI 176 Query: 181 VSKIARPDASSETLIREALR 200 + + + +E LIR AL+ Sbjct: 177 LRRA-KDCKDAEALIRFALK 195 >UniRef50_Q5P2U6 Holliday junction ATP-dependent DNA helicase ruvA n=102 Tax=Proteobacteria RepID=RUVA_AZOSE Length = 199 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 122/201 (60%), Gaps = 6/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ GI++EK PP ++++ GVGYE+ +PM+ FY LP G+ +FTH +RED L Sbjct: 1 MIGRITGILLEKNPPQIVVDTHGVGYEIDVPMSTFYGLPATGESLSLFTHLAIREDGHFL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F++L+K +G+G + AL++LSG+S AV +E G LVK+PGIGKKT Sbjct: 61 YGFASADERAAFRQLLKVSGIGARTALSVLSGLSVSDLAQAVALQETGRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++D+ P A+ D+ + + AL+ALGY +EA Sbjct: 121 AERLLLELRDKLGR-----ALPGFGASTVPGAAAQPADSRSDILNALLALGYSDKEAQSA 175 Query: 181 VSKIARPDASSETLIREALRA 201 + I P+ IR+AL+ Sbjct: 176 LKAIP-PETGVSDGIRQALKL 195 >UniRef50_A4J536 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Desulfotomaculum reducens MI-1 RepID=RUVA_DESRM Length = 199 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 11/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++ P V+I+V G+GY V +P T +LP G E +FTH VRED Sbjct: 1 MIAYIKGLLAADGPGWVVIDVNGIGYHVSIPSTT--QLPALGHEVKLFTHMSVREDGIQF 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ F L+ GVGPK+ALA++S + +A+ E+V LVK+PG+GKKT Sbjct: 59 FGFAKEDEKECFLLLLNVAGVGPKVALAVVSHLPPSNLRSAIAIEDVNQLVKVPGVGKKT 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ KG+ AA T S T + EAV AL+ALGY EA Sbjct: 119 AQRILLELKDKLKGM-------AAVEHSTLQQSVITTGSGDEAVEALLALGYSQGEARDA 171 Query: 181 VSKIAR--PDASSETLIREALR 200 V K + P+ LI+ AL+ Sbjct: 172 VKKAQKSAPEEDLSALIKIALK 193 >UniRef50_B4ST34 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Xanthomonadaceae RepID=RUVA_STRM5 Length = 197 Score = 216 bits (551), Expect = 3e-55, Method: Composition-based stats. Identities = 87/203 (42%), Positives = 130/203 (64%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRGI+ K PP ++++V GVGYE+ PM+ FY+LPE G+E ++TH+ +ED+ L Sbjct: 1 MIGRLRGIVAYKAPPWLVVDVNGVGYELEAPMSTFYDLPELGREVTLYTHYSQKEDSVSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LF+++ K +G+G K+ALA+LSG++ ++F V+ ++ AL ++PGIGKKT Sbjct: 61 YGFLREGERRLFRDVQKVSGIGAKIALAVLSGVTVEEFARMVQAGDITALTRIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E++DR P PA D +A AL LGYKP EA+RM Sbjct: 121 AERMVLELRDRAAQFGAGGALPTGSG-------PAPADPLSDATVALQQLGYKPAEAARM 173 Query: 181 VSKIARPDASSETLIREALRAAL 203 + +IR+AL++AL Sbjct: 174 AREAFNEGDEVAIVIRKALQSAL 196 >UniRef50_A6NV14 Putative uncharacterized protein n=2 Tax=Bacteria RepID=A6NV14_9BACE Length = 201 Score = 216 bits (551), Expect = 4e-55, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G ++ P L +++ GGVGY L G+ A ++TH VREDA L Sbjct: 1 MFYYVKGPVVHMAPYLAVVDCGGVGYACRTTNNTLARL-RKGETATLYTHLNVREDAMEL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E + F+ LI +GVGPK AL+ILS S + ++ + AL PGIGKK Sbjct: 60 YGFASENELSCFQLLISVSGVGPKAALSILSSTSPEGLATSIITGDEKALTVAPGIGKKI 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ G L TP + + + + EA AAL LGY EA+ Sbjct: 120 AQRIILELKDKLAK--GQLSTPGGESYGGTGVTVIPQNKASEAAAALAVLGYSQAEAAAA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 + I + E +I++AL+ + Sbjct: 178 LKNIDMETLALEEIIKQALKKMV 200 >UniRef50_A8PMB3 Holliday junction DNA helicase RuvA n=1 Tax=Rickettsiella grylli RepID=A8PMB3_9COXI Length = 199 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 97/200 (48%), Positives = 133/200 (66%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI RLRGI++EKQPP++L+EV YE+ M FY+LP G++ ++T F+VRED Sbjct: 1 MINRLRGILVEKQPPILLVEVANAFTYEIQASMHTFYQLPHCGEKVFLYTQFIVREDGHF 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+ +ER LF +L+K +GVGPK+AL ILS + +FV+ VE++ V +L +PGIGKK Sbjct: 61 LYGFSTPEERFLFTQLLKVSGVGPKVALGILSKIEVTEFVSCVEQQNVNSLQAVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERLI+EM+DR + L + +L + +Q+A+AAL+ALGYK QEASR Sbjct: 121 TAERLIIEMRDRLRNLSHNQPE-----ILDKNTIQSLKHIQQDAIAALMALGYKNQEASR 175 Query: 180 MVSKIARPDASSETLIREAL 199 V +I S E LIR AL Sbjct: 176 AVLRIKDASLSLEALIRHAL 195 >UniRef50_B2UKW6 Holliday junction DNA helicase RuvA n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UKW6_AKKM8 Length = 220 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 79/206 (38%), Positives = 119/206 (57%), Gaps = 14/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI LRG + E P ++++V GVGYEV +P++ F L P G+E + T+ VRE+ Q+ Sbjct: 24 MIAFLRGTVAESYPQRLILDVHGVGYEVIVPLSTFDRLNPLPGRELTLKTYLHVRENMQV 83 Query: 60 LYGFNNKQERTLFKELIK-TNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 LYGF ER +F LI+ +G+GP A+AIL +S +QF AV +V + + G+GK Sbjct: 84 LYGFATDAERDIFLLLIERVSGIGPATAIAILGSLSVEQFKQAVVGGDVSGIARAKGVGK 143 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTAER+++E+KD+ + A AT A +A AL+ALG+K E+ Sbjct: 144 KTAERIVLELKDKVG----------LAATWEAQAQGATSQAAGDAELALIALGFKQVESR 193 Query: 179 RMVSKIAR--PDASSETLIREALRAA 202 + ++ + PDA + LIR ALR+ Sbjct: 194 KAIAAHLKDHPDADVDELIRAALRSM 219 >UniRef50_C8W4C8 Holliday junction DNA helicase RuvA n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4C8_DESAS Length = 203 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 125/204 (61%), Gaps = 9/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I+ + V+++V GVGY + +P +C +LP AG+E ++ T+ V+ED+ L Sbjct: 1 MIAFLRGKIVFIEANSVVLDVSGVGYRIFVPASCQSKLPAAGEEMLLLTYLSVKEDSLQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +QER LF L+ G+GPK AL++LS +S Q AV RE++ A++K+PGIGKKT Sbjct: 61 YGFIEQQERELFVMLLNVGGIGPKGALSVLSCLSPAQLYLAVAREDIKAVMKVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+KD+ KG + V S + ++A+ AL ALGY EA + Sbjct: 121 AQRLILELKDKLKGRVQPGEETTPETVSGSQ------NEAEDALFALEALGYSVSEAIVV 174 Query: 181 VSKIAR---PDASSETLIREALRA 201 V ++ R + S+ L++ AL+ Sbjct: 175 VQEVLRSSSKNISASELLKNALQK 198 >UniRef50_A8S4H4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S4H4_9CLOT Length = 209 Score = 215 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 120/205 (58%), Gaps = 4/205 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ + ++++E G VG +H+P++ ELP G+E V+T+F VREDA L Sbjct: 1 MISYVKGPLMAIEEDVIVVEAGHVGLAIHVPVSLLPELPGMGKEVTVYTYFQVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + Q+R +F++L+ NG+GPK AL ILS + A+ E+V AL K PGIG KT Sbjct: 61 YGFLHSQDRDMFRQLLGVNGIGPKGALGILSVLRPDDLRLAIVSEDVKALAKAPGIGNKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQ---EAVAALVALGYKPQEA 177 A+RLI+++KD+ + + + + EAV ALVALGY EA Sbjct: 121 AQRLILDLKDKISMDDVLGNMAGGAGMGAADTGASVAGLVEAAKEAVQALVALGYTNTEA 180 Query: 178 SRMVSKIARPD-ASSETLIREALRA 201 SR V ++ D +SE +++ +L+ Sbjct: 181 SRAVKQVEVTDGMTSEDVLKASLKH 205 >UniRef50_B5EAH2 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Deltaproteobacteria RepID=RUVA_GEOBB Length = 199 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + K P ++++V GVGY+VH+P + +Y LP G + H V+EDA L Sbjct: 1 MIALLTGKLAYKSPEFIILDVNGVGYQVHIPFSTYYTLPVEGGALSLQIHTSVKEDAINL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +QE+ LF+ LI +GVGPKLA ILS + +++ + L +PGIGKKT Sbjct: 61 YGFRTQQEKELFQLLIGVSGVGPKLATGILSNSEPSELADSLVNGNLARLSAIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+K++ K L A +PA + + ++AL+ LGYK + Sbjct: 121 AERLVLELKEKMKKLGL------AQPQAGGTTAPAKQEIRDDVLSALINLGYKEAVVQKA 174 Query: 181 VSKIA-RPDASSETLIREALRAAL 203 ++++ DA+ E ++++AL+ + Sbjct: 175 LAELKVTEDATVELVLKQALKILM 198 >UniRef50_A4IY85 Holliday junction ATP-dependent DNA helicase ruvA n=18 Tax=Francisella RepID=RUVA_FRATW Length = 216 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 135/212 (63%), Gaps = 9/212 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++IEK P +LI+V G+GYEV +PMT FY L + + ++THF+VREDAQ L Sbjct: 1 MISFIKGVLIEKDPTALLIDVNGIGYEVFVPMTTFYTLGDIDSQVSLYTHFIVREDAQQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K ++ +F+ELIK NG+G + A+AILSGM ++ ++ +E ++ L +PGIGKKT Sbjct: 61 YGFKSKVDKKVFQELIKVNGIGARTAIAILSGMDSKTLLHCIENKDYALLATVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA---------TDDAEQEAVAALVALG 171 AERL+VE+ D+ + +++ + TS S A + E+V AL+ALG Sbjct: 121 AERLVVEIYDKLLKMANEIYAQTSGTTTTSQDSQAQQAPTSVVLANSIFNESVDALLALG 180 Query: 172 YKPQEASRMVSKIARPDASSETLIREALRAAL 203 YK ++A +M ++ +IR+AL+ ++ Sbjct: 181 YKQKDAEKMARSAMGDATTAAEVIRKALQGSI 212 >UniRef50_C9KK52 Holliday junction DNA helicase RuvA n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK52_9FIRM Length = 199 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 122/201 (60%), Gaps = 6/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G +I L++V GVGY V + + +L +EA +FT+ VREDA +L Sbjct: 1 MIGYLHGRVIALYTDYCLLDVHGVGYRVFLANSTRAKL-RLKEEASLFTYTSVREDAIVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF +LI +G+GPK+AL ILS ++ + A++ ++ L KLPGIGKK+ Sbjct: 60 YGFATEEEYELFLQLIGVSGIGPKVALGILSAITVESLCRAIQNKQASVLTKLPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLI+E+KD+ + +L+ + DDA EA+AAL +LGY E + + Sbjct: 120 AERLILELKDKVA----FADSGEEELLTIENEAEVGDDAVAEAMAALQSLGYTQAEIAPV 175 Query: 181 VSKIARPDASSETLIREALRA 201 + K A+ ++E +I+E+L+A Sbjct: 176 IRKTAK-YKTTEAIIKESLKA 195 >UniRef50_C4Z030 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Clostridiales RepID=RUVA_EUBE2 Length = 207 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 69/205 (33%), Positives = 119/205 (58%), Gaps = 2/205 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + E P ++++E G+GY +++P + ELP G E ++T+ V+ED L Sbjct: 1 MISYIKGELAEILPDVIVVEANGIGYNIYVPGSVPGELPSVGSEVKIYTYMNVKEDECSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + + ++FK LI NG+GPK AL LS ++A AV ++V A+ LPGIG KT Sbjct: 61 FGFLTRDDLSMFKMLICVNGIGPKAALGALSNITADDLRFAVLADDVAAIKALPGIGPKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPAS-PATDDAEQEAVAALVALGYKPQEASR 179 A+++I+E+KD+ K + + + ++ +AV ALV+LGY ++A Sbjct: 121 AQKIIIELKDKLKLDEVFESALSKNKKADNNSNVSNVMMIRNDAVEALVSLGYSSKDALV 180 Query: 180 MVSKIAR-PDASSETLIREALRAAL 203 V ++ + SET+++EAL+ + Sbjct: 181 AVKEVEDIENKDSETVLKEALKKLV 205 >UniRef50_B6BW72 Holliday junction DNA helicase RuvA n=1 Tax=beta proteobacterium KB13 RepID=B6BW72_9PROT Length = 189 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 87/200 (43%), Positives = 126/200 (63%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG +RGI+I++ PP V ++ GG+GYE+ +PM+ +Y LPE + + H VVREDAQLL Sbjct: 1 MIGSIRGILIDRSPPWVQVDCGGIGYEIEVPMSTYYHLPELQSDIFLHVHMVVREDAQLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E++ FK LIK NG+G K+AL+ILSG+S QF NA+E+++V LVK+PGIG+KT Sbjct: 61 FGFLTKEEKSSFKSLIKINGIGAKVALSILSGVSMDQFSNAIEQQDVSLLVKIPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE+KD+ L S + + AL ALGY + ++ Sbjct: 121 AERLIVELKDK--------------QDLKLQQSSQHSKNLTDIMDALEALGYSKSDIQKV 166 Query: 181 VSKIARPDASSETLIREALR 200 + D + I++AL+ Sbjct: 167 IKNF-NEDINVNEGIKQALQ 185 >UniRef50_Q67Q98 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Clostridiales RepID=RUVA_SYMTH Length = 205 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ V+I+V GVGY +P + LP G ++T+ VREDA L Sbjct: 1 MIAHLRGELVTAGADWVVIDVAGVGYRCLVPASTRSRLPAQGAAVQLYTYLQVREDALTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E LF+ L++ +GVGPK+ALA+LS F AV E++ A+ ++PGIG+KT Sbjct: 61 YGFLTQAEYDLFELLLRVDGVGPKVALAVLSTTDPAAFRRAVAFEDLDAICRVPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP---QEA 177 A+RL++E+KD+ + L + A DA EA AL+ALGY A Sbjct: 121 AQRLVLELKDKIGAVPAGGGGVPDGLPV---AVAPAGDAWAEASEALIALGYSRGEAAAA 177 Query: 178 SRMVSKIARPDASSETLIREALR 200 V A S ETL+R AL+ Sbjct: 178 LARVRAEAGEAPSVETLVRLALK 200 >UniRef50_Q6MFA5 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Parachlamydiaceae RepID=RUVA_PARUW Length = 201 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 112/205 (54%), Gaps = 7/205 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G++ P +++V GVGY + +P +LP+ G+ +T +VVRE + L Sbjct: 1 MFAYIKGVLAFFNPSQAIVDVHGVGYLLFIPCRLLGQLPQIGEPVQFYTTYVVREFSHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + QER +F+ L+ G+GPK+AL+++ +S + AV R+++ L ++PG+GKKT Sbjct: 61 YGFLSYQERDIFEILMNVTGIGPKMALSLIGHLSMSELQIAVMRQDLSTLCRVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE+KD+ + + + + P + Q+A+ AL+ LGY A + Sbjct: 121 AERLIVELKDKLAAIGHLDTSDHIEPLTQDPK----SKSVQDAMLALINLGYNQTTAQKA 176 Query: 181 VS---KIARPDASSETLIREALRAA 202 + K + LI AL+ Sbjct: 177 IKQGMKELPEEIDLAQLITVALKHV 201 >UniRef50_C4KD09 Holliday junction DNA helicase RuvA n=12 Tax=Bacteria RepID=C4KD09_THASP Length = 200 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 84/201 (41%), Positives = 121/201 (60%), Gaps = 5/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGR+ G ++EK PP +L++ GVGYE+ +PM+ FY LP G + THFVVRED L Sbjct: 1 MIGRITGTLLEKNPPQILVDAHGVGYEIDVPMSTFYNLPATGGTVSLHTHFVVREDGHFL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ER F++L+K +GVG ++ALA+LSG+S AV +E G LVK+PGIGKKT Sbjct: 61 FGFATEEERATFRQLLKVSGVGARMALAVLSGLSVNDLAQAVALQEAGRLVKIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++D+ + A A + + AL+ALGY +EA Sbjct: 121 AERLLLELRDKLGKALPSMTGARLAAAAPGAAPDAKS----DILNALLALGYNEREALSA 176 Query: 181 VSKIARPDASSETLIREALRA 201 + + D IR+AL+A Sbjct: 177 MKGL-AEDVGVSDGIRQALKA 196 >UniRef50_B7GYB6 Holliday junction ATP-dependent DNA helicase ruvA n=16 Tax=Acinetobacter RepID=RUVA_ACIB3 Length = 199 Score = 213 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 92/203 (45%), Positives = 134/203 (66%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + P VL+ V GVGYE+ P++ F +L + GQ+ ++TH VVREDAQ L Sbjct: 1 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQL-QKGQKVTLWTHLVVREDAQQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ QE+T+F+ L+K NGVGPK+AL ILS +S + V+ +E ++V LVK+PG+GKKT Sbjct: 60 YGFSDAQEKTIFRTLLKVNGVGPKMALGILSTLSVELLVHTIEHDDVNTLVKVPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++DRFK L + AA + ++ EA AAL +LGYKP EA + Sbjct: 120 AERLMIELRDRFKTLAQGTSSAAALPQI----QFVSNSPVAEAEAALQSLGYKPLEAQKA 175 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ + S +IR AL++ + Sbjct: 176 VAAVKADYTESADIIRAALKSMM 198 >UniRef50_A6DHC9 Holliday junction DNA helicase motor protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHC9_9BACT Length = 206 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 6/206 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++E + +I+VGGVGY V +PM+ + LP+ G + H VREDA L Sbjct: 1 MIAHLKGQLVELELSNAVIDVGGVGYYVDIPMSTYDRLPKVGSPVALRIHMTVREDAMNL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER+ F+ + +G+GPK+ALA LS + + F A++ + L K+ G+GK+ Sbjct: 61 YGFATDEERSFFRMITSVSGIGPKIALAALSALPTETFCEAIQEGNIKLLSKISGVGKRM 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+ L A V S +A +++ AL ALGY+P + Sbjct: 121 AERMVVELRDKVGALGMTSAFVA--KVADDDMSAQDKEAFNDSIMALEALGYRPDTIRKT 178 Query: 181 VSKIAR----PDASSETLIREALRAA 202 V I SSE +I+ AL A Sbjct: 179 VKTIFDGLSPAQRSSENIIKAALSAM 204 >UniRef50_B9ZJ99 Holliday junction DNA helicase RuvA n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJ99_9GAMM Length = 201 Score = 213 bits (542), Expect = 4e-54, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 122/203 (60%), Gaps = 4/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL G +I ++ V+I+ GGVGYEV +P++ LPE G ++ TH VVREDA L Sbjct: 1 MIARLEGTLISREVNGVVIDAGGVGYEVEVPLSTLAALPEPGATVVLTTHLVVREDAHQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K++R LF+ LI+ NG+G KLALA+LS + + + +V L K+PGIGK+T Sbjct: 61 FGFMHKRDRDLFRRLIRVNGIGAKLALAMLSTYAGDELAGLISGGDVTGLAKVPGIGKRT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+ +R + AD P + EA+AAL +LGY A +M Sbjct: 121 AERVVLELGERLAEMGFAAAPGGADAGADIPGAAMDG----EALAALESLGYPRASAEKM 176 Query: 181 VSKIARPDASSETLIREALRAAL 203 V+ + S E+L+R ALRA + Sbjct: 177 VAAVRDQADSVESLVRLALRATV 199 >UniRef50_C4V2G2 Crossover junction endodeoxyribonuclease n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2G2_9FIRM Length = 199 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 6/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G L++V VGY V + + E +++ H VREDA LL Sbjct: 1 MIGFLKGKATHITSDYCLLDVHDVGYRVFISDQTRAHI-SPNAEVMLYIHTNVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++E LF LI +G+GPK+A ILS + F V++++V + KLPGIGKKT Sbjct: 60 YGFFSREEYDLFLLLIGISGIGPKVAQGILSSATVNDFYCMVQQKDVKGITKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD+ + + + V + + EA AL+ LG++ E R+ Sbjct: 120 AERILLELKDKLSDVSVEDLPEGDNNVG----AEIENGMVAEATEALLTLGFQDSEIQRV 175 Query: 181 VSKIARPDASSETLIREAL 199 + ++E LIR AL Sbjct: 176 FRQ-KHSCQNTEELIRYAL 193 >UniRef50_Q1NVI5 DNA recombination protein, RuvA:Helix-hairpin-helix motif n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NVI5_9DELT Length = 212 Score = 212 bits (541), Expect = 5e-54, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 9/210 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + +K +++EVGGVGYEV P LP G+E ++ VVRED+ L Sbjct: 1 MIATLRGQLTQKGADSLIVEVGGVGYEVFFPAGRQDRLPPRGEELFLYIQTVVREDSFCL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ F L+ +GVGP+LA+ IL+ + A+ +++ L KLPG+GKKT Sbjct: 61 YGFVDAAEKQFFLLLLGVSGVGPRLAMNILAAAAPDVLGRAIATDDIAGLKKLPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLF--TPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 AERL +E+KD+ P A Q+A +AL+ LGY P A Sbjct: 121 AERLCLELKDKVDFFPAAKPLARPDQAPPAEQGADFGAQPVFQDAYSALLNLGYPPVRAR 180 Query: 179 RMVSKIARP-------DASSETLIREALRA 201 + ++ R + L+R LR+ Sbjct: 181 SALEEVRRQLEQEPAGELPLPELLRITLRS 210 >UniRef50_C2KW74 Possible crossover junction endonuclease RuvA n=1 Tax=Oribacterium sinus F0268 RepID=C2KW74_9FIRM Length = 199 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 122/201 (60%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ E + +++IE GG+GY V +P + F + P+ G+E ++ T+F VRED+Q L Sbjct: 1 MIRFIHGILREVKEDMLVIEAGGLGYGVRIPASVFDKAPKTGEEILLHTYFSVREDSQEL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++R F +L+ +G+GPK AL I S MS ++ ++A+ + + K PG+GKK+ Sbjct: 61 FGFWEERDRDFFIKLLSVSGIGPKTALGIFSCMSREELIHAIISNDSKKIQKAPGLGKKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERLIVE++D+ + + AT A +EAV ALV+LGY EA R Sbjct: 121 AERLIVELRDKVPKEDITF------SGEEAVETTATSVAVEEAVEALVSLGYSVMEAKRW 174 Query: 181 VSKIAR-PDASSETLIREALR 200 + I + ++E L+R +L+ Sbjct: 175 IRSIPAYEEKTAEELLRISLK 195 >UniRef50_Q21HN5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Gammaproteobacteria RepID=RUVA_SACD2 Length = 207 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 97/208 (46%), Positives = 134/208 (64%), Gaps = 6/208 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL GI+ EK+ P +LI++GGVGY+V PMT FY LP G++A++ THF V E +Q L Sbjct: 1 MIGRLTGILAEKKAPHLLIDIGGVGYDVIAPMTTFYRLPALGEKAVLHTHFSVSETSQQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+++Q+R LF+ LIK NGVGPKLA+ I+S M + F V + ALVKLPG+GKKT Sbjct: 61 FGFSSQQDRELFRMLIKVNGVGPKLAVGIMS-MESSDFAKCVLDGNLTALVKLPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLH----GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 AERL+V+M+DR K L T ++ T+ +A +AL+ LGYKP E Sbjct: 120 AERLLVDMRDRVKALDTTPSEHSPTGEGAGIVRVDPVINTNVIIADAESALIGLGYKPTE 179 Query: 177 ASRMVSKIARPDASS-ETLIREALRAAL 203 A++ VS ++ E LIR AL+ + Sbjct: 180 AAKAVSAAYNDTITTSEDLIRAALKGMI 207 >UniRef50_C0EG91 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EG91_9CLOT Length = 202 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 10/205 (4%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI ++G + P +I+ GG+GYE+ MT +L + G+ A ++T+ VRED Sbjct: 1 MIYSIQGELELLTPADNHFLAVIDCGGIGYEIRTTMTTASQLKQGGK-AKLYTYLNVRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A L+GF + +ER FK LI +GVGPK AL+ILS ++ QF V + +L + GI Sbjct: 60 AVELFGFFDTEERNCFKMLISVSGVGPKAALSILSNVTPSQFALCVASGDSKSLTRAKGI 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G K A+R+++E+KD+ S A P+ EAV+ALV LGY + Sbjct: 120 GAKIAQRIVLELKDKISN----EQLAGGVTDSGSVALPSGSGNTAEAVSALVVLGYNKTD 175 Query: 177 ASRMVSKIARPDASSETLIREALRA 201 A + +S D E LI+ L+A Sbjct: 176 AVQALSSYPA-DTPVEELIKAGLKA 199 >UniRef50_Q3A231 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfuromonadales RepID=RUVA_PELCD Length = 197 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 116/204 (56%), Gaps = 9/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G +IEK V+++VGGVGY + +P++ +Y LP+ G + H VREDA LL Sbjct: 1 MIALLNGQLIEKTVSQVILDVGGVGYRLLIPLSTYYALPDEGD-VRLRVHTHVREDALLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF L+ +GVGPK+AL ILS + A A+ + L +PGIGKKT Sbjct: 60 FGFLTETEKDLFGLLLSVSGVGPKVALNILSHLPAADLQQALSQGNAKHLATVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ + + D ++A++ALV LGYK + + Sbjct: 120 AERLVLELREKVGPVQAVPGNAPL-------PAETAGDLREDALSALVNLGYKENLSRKA 172 Query: 181 VSKIA-RPDASSETLIREALRAAL 203 + I PDA E ++++AL+ + Sbjct: 173 LDGIDTAPDAPLEDILKQALKLLM 196 >UniRef50_C0ZAN3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Bacillales RepID=RUVA_BREBN Length = 205 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 111/202 (54%), Gaps = 6/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + ++IE GG+GY + P + + G + +FTH VREDA LL Sbjct: 1 MIDFVEGTLSYLDSEYIVIETGGIGYRLFCPNPYQF-VRYEGNKTKLFTHHHVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LF++L+ +G+GPK LAIL+ + +Q V AV++E V L K PGIGKKT Sbjct: 60 YGFATRDERDLFRKLLDVSGIGPKGGLAILAAATPEQLVMAVQQENVTYLTKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE---A 177 A+R+I+++KD+ G A LT+ A EA+ AL ALGY E Sbjct: 120 AQRIILDLKDKLVGYTPSAILTVAAGDLTAGEQAV--SALNEALDALTALGYSDGELQKI 177 Query: 178 SRMVSKIARPDASSETLIREAL 199 +S+ ++ E LI++ L Sbjct: 178 RNTLSEKSKEGDGVEKLIKQGL 199 >UniRef50_B6GE75 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GE75_9ACTN Length = 208 Score = 211 bits (539), Expect = 8e-54, Method: Composition-based stats. Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 2/202 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L G + E P + +I+V GVG+E+ + T LP+ G + +++T VVRED+ L Sbjct: 1 MISQLHGTVAEATPSMAVIDVNGVGFELGISGTTAAGLPQVGGKVLLYTRMVVREDSCTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K ERT+F +L+ +GVG KLALAIL+ S Q V E+ + +PG+GKKT Sbjct: 61 FGFASKDERTMFDKLVAVSGVGAKLALAILTTFSVPQLYAVVMAEDDKGMATVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAAD--LVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+RLI+E+K F + A + A P +A +A AAL+++G+ P E S Sbjct: 121 AQRLILELKGAFSKDRSLAGSAVAASIPLPLDVARPVAPNAMDDASAALLSMGFTPAEVS 180 Query: 179 RMVSKIARPDASSETLIREALR 200 +S D E L+ AL+ Sbjct: 181 LALSGYDGADMRVEDLLAAALK 202 >UniRef50_A0L4V9 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Proteobacteria RepID=RUVA_MAGSM Length = 204 Score = 211 bits (539), Expect = 9e-54, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 118/203 (58%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G + K P V+++V GVGY V + + + ELP G+ +++T VREDA LL Sbjct: 1 MIAQLKGSLAAKHPDHVVMDVHGVGYRVFISLATYNELPTVGEACLLYTVTHVREDAFLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+++ +R +F L NG+G KLALA LS + + + A+ RE++ L +PG+GKKT Sbjct: 61 YGFHSESQRKVFNLLTSVNGIGTKLALAALSSHTPEALLTALSREDLTLLCTIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+ +E+KD+ L T A + + + +E +AL+ LGYKP + Sbjct: 121 AQRMAMELKDKLGALPMAAPTTA---IGAATMAANPAGLREEVASALLNLGYKPPQVDAA 177 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++K+ ++ I AL+ AL Sbjct: 178 LAKLFSAGEITD--ISVALKGAL 198 >UniRef50_C6JAH0 Holliday junction DNA helicase RuvA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAH0_9FIRM Length = 202 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 2/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G+ ++ V++E GG+GYE++M E+ G++ V T+F VREDA L Sbjct: 1 MIAFVHGMAVDMTESSVVVEAGGIGYEIYMTGADLSEI-RMGEDVKVHTYFSVREDAMKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K + +FK L+ NGVGPK AL +L+G++A + A+ ++V L K PGIGKKT Sbjct: 60 YGFRAKDDLQMFKLLLGVNGVGPKAALGVLAGITADELRFAILSDDVKTLSKAPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++LI+E+KD+ K + + + D QEAV ALVALGY +A R Sbjct: 120 AQKLILELKDKMKLEDAFELKLVHEQERAAVGAGEVSDGRQEAVEALVALGYSSADALRA 179 Query: 181 VSKIARPDA-SSETLIREALR 200 V K+ E L++ AL+ Sbjct: 180 VRKVTDVSPDDVEGLLKAALK 200 >UniRef50_C2FZN8 Crossover junction endodeoxyribonuclease n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZN8_9SPHI Length = 194 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 12/202 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G ++ K P V+++V G+GY +H+ + F L + + +F F VRED+Q L Sbjct: 1 MYEYFNGKLVFKAPTHVVLDVNGIGYYIHISLNTFA-LIKDQENCKLFISFQVREDSQTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER LF+ LI +G+GP ILS ++ ++ +A+ +V + K+ GIG KT Sbjct: 60 FGFATEGERQLFEHLISVSGIGPNTGRMILSSITPEEIQSAIINGQVAVIQKIKGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E++D+ K +EA++AL+ LG+ +A ++ Sbjct: 120 AQRLILELQDKLKK---------QGPDALISPVATKQSVPEEALSALIMLGFVKNQAEKV 170 Query: 181 VSKIAR--PDASSETLIREALR 200 ++ I PD S E LI+ AL+ Sbjct: 171 LNTIINTEPDLSVEQLIKLALK 192 >UniRef50_A8SPH1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8SPH1_9FIRM Length = 208 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 5/208 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + + +++E GG+GY + + LP VFT+ VRED L Sbjct: 1 MISYITGTLEYQSGNSIVVECGGIGYSMMISGQFMNRLPAMHSHIKVFTYMSVREDEISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E +FK L+ NGVGPK A++ILS ++ + AV E+V A+ + GIG K Sbjct: 61 YGFYDRDELEVFKVLLSVNGVGPKAAMSILSALTVNELRLAVVSEDVKAITRANGIGTKG 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPA----ADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 A R+I+E+KD+ + V + + + D VAAL ALGY E Sbjct: 121 ASRIILELKDKLRLEDMIDAAYEDAMNGSRVGSGGVAQSDIDTRANVVAALTALGYSGVE 180 Query: 177 ASRMVSKIAR-PDASSETLIREALRAAL 203 A R V+++ D E L++ +L+ + Sbjct: 181 AGRAVNRVEGWQDMDEEQLLKASLKNII 208 >UniRef50_UPI0001C37714 Holliday junction DNA helicase RuvA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37714 Length = 206 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 2/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + K+ +IE GGVGY L E G EA+++TH VREDA L Sbjct: 1 MIYSLKGKLTVKELGFAVIECGGVGYGCKTSYNTIASLGEVGSEAMLYTHLYVREDAVEL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +QE + F+ LI +GVGPK A++ILS ++ ++F V + + + GIG KT Sbjct: 61 FGFATQQELSCFRLLISVSGVGPKAAISILSDVTPEKFAFLVASGDSKSFTRTKGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ ++ +D EA+ AL+ LGY E + + Sbjct: 121 AQRIVLELKDKISSESISGSVSGDAAAFAPSSAAPSDSV-SEALEALMVLGYTQGETAPI 179 Query: 181 VSKIARPDASSETLIREALRA 201 + K+ P S++ LI+E LR Sbjct: 180 LGKL-DPSMSTQDLIKETLRL 199 >UniRef50_B0K955 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Thermoanaerobacteraceae RepID=RUVA_THEP3 Length = 187 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 17/203 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGII + V+I+ G+G +V +P + LP G ++T+ VRED + Sbjct: 1 MIEYVRGIIEDIGQDYVVIDFMGIGIKVFVPFSTLKVLPSKGNITKLYTYLQVREDGFQI 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E LF++L+ +GVGPK AL+ILS +S FV AV + AL PGIGKKT Sbjct: 61 FGFKTKEELDLFEKLLSVSGVGPKGALSILSVVSIDNFVKAVNAGDYKALTVAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ ++ EA+ AL+ALGY EA Sbjct: 121 AERIILELKDKLPKEIVFEGD---------------NNFSNEALEALLALGYTKSEAIYA 165 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++ I S E +++AL+ + Sbjct: 166 LADI--TCDSVEDAVKQALKKLM 186 >UniRef50_C8WQH8 Holliday junction DNA helicase RuvA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQH8_ALIAD Length = 208 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 108/199 (54%), Gaps = 7/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + P V ++V VGY VH+ L G A ++TH VRED L Sbjct: 1 MIAFLRGRVAFLGPGYVDLDVRDVGYRVHVCDRTQAAL-NLGDTAFLYTHHHVREDGWAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER LF+ L+ +G+GPKLAL ++ + V A+ E+ +L +LPGIG+K Sbjct: 60 YGFETIEERALFERLVAVSGIGPKLALQVIGAAGVGEIVAAILAEDAESLSRLPGIGRKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL+VE++++ L A ++ ++AV+ALVALGY+P+EA Sbjct: 120 ASRLVVELREKLDDLAPAALRAPAPASSPQGSAA------EDAVSALVALGYRPREAEEA 173 Query: 181 VSKIARPDASSETLIREAL 199 VS + R S E I+ AL Sbjct: 174 VSAVGRGRQSVEDTIKAAL 192 >UniRef50_Q0TP12 Holliday junction ATP-dependent DNA helicase ruvA n=36 Tax=Clostridium RepID=RUVA_CLOP1 Length = 201 Score = 210 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +RG V+IE+ +GY++ +P+ G+E +++ +VRED L Sbjct: 1 MYEYIRGQFQGISKDYVVIELNNIGYKIFTSGNTMSNMPKVGEEVLLYLEQIVREDFIGL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E +FK L+ NGVG K AL++LS + A+ + + + PGIGKKT Sbjct: 61 YGFTTREELEMFKLLLSINGVGAKAALSLLSISTVNNLKYAIMMGDEKHITRAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K +L + +L+ + E ++AL+ALGY +EA + Sbjct: 121 AQRIILELKDKLK--PDELTSEEGELIEGINDNSDYSFNINETLSALMALGYTEKEAQKA 178 Query: 181 VSKIARPDASSETLIREALRAAL 203 + K+ + S E +I+E+L+ + Sbjct: 179 LEKVDKT-LSIENMIKESLKLLM 200 >UniRef50_C7N4C8 Holliday junction DNA helicase, RuvA subunit n=4 Tax=Coriobacteriaceae RepID=C7N4C8_SLAHD Length = 197 Score = 210 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 8/200 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + IEV GVG+ V MP + +LPE G+E +V T+ VREDA L Sbjct: 1 MIAFLNGRVAGHTTDTAFIEVNGVGFAVGMPASDLAKLPERGEEVLVHTYLAVREDAMAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ F++LI +GVGPK+ALA LS ++ NA+ +V A+ +PG+GKKT Sbjct: 61 YGFLTQDEKRFFEKLIGVSGVGPKVALAALSVYKPEELANAIAAGDVKAVSMIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+K F + + + A AL+++G+ EA Sbjct: 121 AQRMILELKGSFSDENMQSLF--------DQETAEATRRLEGAREALLSMGFSSAEADLA 172 Query: 181 VSKIARPDASSETLIREALR 200 + + LI+ ALR Sbjct: 173 LKDAPEELHTDSALIQYALR 192 >UniRef50_C0ES21 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES21_9FIRM Length = 230 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 4/203 (1%) Query: 2 IGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY 61 I ++G + K V+IE G+GY++ +P + +G+EA++ T+ VRED L+ Sbjct: 28 ISYIKGTVAYKGKDSVVIENHGIGYQIKVPSRVLEGV-NSGEEAMLHTYLYVREDQLALF 86 Query: 62 GFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTA 121 GF++ QE F+ L+ +G+GPK AL++LS MS + AV E+ ++ K PGIG K A Sbjct: 87 GFSSIQELETFQILLGISGIGPKAALSVLSTMSVEDLYYAVFSEDAKSIAKTPGIGPKGA 146 Query: 122 ERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMV 181 +R+I+E+KD+ L + + +S D+ + V ALVALGY EA R V Sbjct: 147 KRMIIELKDKLN--LEALESVSGAEEAAPQSSFTEGDSIADTVQALVALGYSNGEAYRAV 204 Query: 182 SKIARPD-ASSETLIREALRAAL 203 + + +E L++EAL+ L Sbjct: 205 HSVPEAEKLDAEQLLKEALKKVL 227 >UniRef50_Q2S5C8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Rhodothermaceae RepID=RUVA_SALRD Length = 202 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G +++K L++V G+GY VH+P + + LP+ +E + T+ +RED + L Sbjct: 1 MIDYVSGTLVDKTTDSALVDVNGLGYRVHVPTSTYKRLPDTDEEVTLHTYHYLREDDESL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ERT+F+ + + VGPKLAL+ LS M+ + + V + L ++ G+G KT Sbjct: 61 YGFATKAERTVFETMTGVSRVGPKLALSALSAMTPTELRDHVMEGDKSRLTQISGVGTKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE++DR L T + A D + AL LG +A R Sbjct: 121 ADRLIVELRDRLADLDVLEDTSPLSGGSDARAEARADA-----LEALTELGLSKADAERS 175 Query: 181 VSKIARPDA---SSETLIREALRA 201 + ++ R +A S++ L+R AL+A Sbjct: 176 IRQVLRDNAGIQSADELVRRALKA 199 >UniRef50_Q2W2A3 Holliday junction ATP-dependent DNA helicase ruvA n=76 Tax=Alphaproteobacteria RepID=RUVA_MAGSA Length = 212 Score = 208 bits (531), Expect = 8e-53, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 6/206 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G+I +++ GVGY V L E G A +F VREDA L Sbjct: 1 MIAKLKGLIDSLGDDWAVVDCNGVGYLVACSSKTLARL-ETGTAAALFVETQVREDAISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L GVG K+ALAILS S Q + + ++ L + G+G K Sbjct: 60 FGFLETGERDWFRLLTTVQGVGAKVALAILSVASPDQLLQIIAAQDKAGLTRANGVGPKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAA--DLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A R++ E+KD+ + F+P D + S PA ++AV+ALV LGYK EA Sbjct: 120 AVRILTELKDKAGKIALGGFSPGGIKDALSASAPLPAASGRMEDAVSALVNLGYKRLEAF 179 Query: 179 RMV---SKIARPDASSETLIREALRA 201 + V ++ +A S LIR AL+ Sbjct: 180 QAVGETARELGDEADSSALIRAALKH 205 >UniRef50_B3QVA9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=RUVA_CHLT3 Length = 200 Score = 208 bits (530), Expect = 9e-53, Method: Composition-based stats. Identities = 75/204 (36%), Positives = 108/204 (52%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ L G +IEK +++EV GVGY +++ T +LP G + + T+ VREDA L Sbjct: 1 MLSYLSGTLIEKFSTEIVVEVNGVGYLLNISATTHEKLPAIGNQIKILTYLYVREDALQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++R +FK LI +GVGPKLA ILSGMS Q +V + AL + G+GKKT Sbjct: 61 YGFITTEDREVFKLLIAISGVGPKLAQTILSGMSTAQLRESVIAGDTKALTAIAGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ L + +A +AL++LG+ A + Sbjct: 121 AERIILELKDKLVKLDLKIDIKETAFRSD------KQQVRNDAYSALISLGFTKSIAEKA 174 Query: 181 VSKIARP--DASSETLIREALRAA 202 + D S + LIR ALR Sbjct: 175 MRAAIAEVPDGSVDDLIRVALRHV 198 >UniRef50_Q6GG62 Holliday junction ATP-dependent DNA helicase ruvA n=53 Tax=Staphylococcus aureus RepID=RUVA_STAAR Length = 200 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 6/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + P V++E GVGYE+ P + ++ E ++ T +VREDAQLL Sbjct: 1 MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQ-KHLDHEVLIHTSLIVREDAQLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++E+ +F LIK G+GPK ALAIL+ + + A+E E L K PGIGKKT Sbjct: 60 YGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + K + L+ S D QEA+ AL ALGY +E +++ Sbjct: 120 ARQIVLDLKGKVK----ITEEDSDSLLQVDATSTEQDQFVQEAMLALEALGYSKRELAKV 175 Query: 181 VSKIAR-PDASSETLIREALRAAL 203 + + S + ++ L+ + Sbjct: 176 EKTLNKNKYDSVDEAVKAGLQLVV 199 >UniRef50_Q3ATE5 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Chlorobiaceae RepID=RUVA_CHLCH Length = 204 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 7/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M RG +I +IE+ GV Y + T +LP +G E +F H VREDA LL Sbjct: 1 MYAYFRGTLISFTADEAIIELQGVAYHFLISATTSRQLPNSGSEVQLFAHLYVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ER LF+ L++ +GVGPKLAL++LSG+ + +A+ L + G+GKKT Sbjct: 61 YGFYSEEERQLFRLLLQASGVGPKLALSVLSGLPVHEVHDAIVSNIPERLYGISGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E++D+ L +P A +A+ ALV LG+ A + Sbjct: 121 AARIILELRDKILKL-----SPVLPTATARRPHNAAQQLRDDAITALVTLGFPRAAAQKT 175 Query: 181 VSKIARPDA--SSETLIREAL 199 V+ + ++ + E +++ AL Sbjct: 176 VTSLLDENSNCTVEEVVKSAL 196 >UniRef50_B5JGR2 Holliday junction DNA helicase RuvA n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGR2_9BACT Length = 205 Score = 208 bits (529), Expect = 1e-52, Method: Composition-based stats. Identities = 80/204 (39%), Positives = 120/204 (58%), Gaps = 5/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ P +I GG+GY VH+P++ +LP G+ + TH V RED+Q L Sbjct: 1 MIVSIEGILERATPLTAIINAGGLGYLVHIPVSTAAKLPANGETVKLHTHAVYREDSQSL 60 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF ++ ER F+ LI K +GVGPK+A+ ++S + ++A+ + L K PGIGKK Sbjct: 61 YGFASEDERNFFQLLIEKVSGVGPKVAIGMMSKLELPSLISAIGNADAVLLAKTPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHG-DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 TAER+++E+KD+ P LV + A+ E +A+ AL+ALGYK +A+ Sbjct: 121 TAERVVIELKDKLGAFAHTSSANPLQGLVPGNTAAAGKVSHEDDAILALLALGYKQSDAA 180 Query: 179 RMVSK---IARPDASSETLIREAL 199 + V K P+AS+E LI+ AL Sbjct: 181 KSVGKAVEALGPNASTEALIKAAL 204 >UniRef50_B5IKU6 Holliday junction DNA helicase RuvA n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IKU6_9CHRO Length = 214 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 9/208 (4%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G I + +L+ GVGYEV + + LP G + H +RED Sbjct: 1 MIGWLQGDIADPWQHDKRCGLLLLCRGVGYEVQVSQRDWRRLPPPGSPLALHIHQSIRED 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A LYGF +QER LF++L+ +GVGP++A+ +L + ++ V A+ + ++ L + PG+ Sbjct: 61 AWTLYGFTARQERDLFRDLVAVSGVGPQMAMGLLGALEMEELVQAIVQPDLRRLCQAPGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL VE++ R + + AA+ A D + + LV+LG+ E Sbjct: 121 GKRTAERLAVELRVRLQERYLGAVETAAEADPEQLPGLA-DGSRDDICGTLVSLGFADLE 179 Query: 177 ASRMVSKIARP----DASSETLIREALR 200 R + +A +AS+E IR+ LR Sbjct: 180 IHRALRAVASQGLTAEASTEDWIRDCLR 207 >UniRef50_Q11Z44 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Bacteroidetes RepID=RUVA_CYTH3 Length = 199 Score = 207 bits (527), Expect = 2e-52, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + K P V+++V G+GY + + + F +L + + + T ++EDA L Sbjct: 1 MIAYIEGKLAHKDPTFVVVDVQGIGYHIRVSLHTFSQLKDL-ERVKIHTFLHIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F L +G+GP AL +LS M+ + A+ RE+V + + GIG KT Sbjct: 60 FGFADLMEKEMFLHLTSISGIGPGTALVVLSSMNPIELKEAIAREDVKTIQSVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ K A S + + EA+ AL+ LG+ A + Sbjct: 120 AQRVILELKDKMKK-----DALLAGSDSKQNFSVSHNSIRSEALTALITLGFTKTVAEKN 174 Query: 181 VSKIARPDA---SSETLIREALR 200 + I + ++ + E LI++AL+ Sbjct: 175 LDLILKGNSNSFTLEDLIKQALK 197 >UniRef50_C1SHM7 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHM7_9BACT Length = 192 Score = 206 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 12/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGI+IEK P +I+ G V +E+ + + + +LPE GQ+A V+THFV+RED L Sbjct: 1 MIYSVRGILIEKNPANAVIDTGAVAFEMSISASTYQQLPETGQKAHVYTHFVMREDGVYL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E+ LF LI + VGPKLALAILSGM +F+NAV E+G + +PGIGKKT Sbjct: 61 YGFSKMEEKKLFLLLITISKVGPKLALAILSGMDVNKFMNAVMNSEIGLISTIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+F + S ++ V+AL+ LGY + + Sbjct: 121 AERIVVELRDKFGSM------------SVSTGDEPVAGGAEDVVSALLNLGYSRADCQKA 168 Query: 181 VSKIARPDASSETLIREALR 200 V+KI + D+ E L + AL+ Sbjct: 169 VNKIYKTDSGFEELFKGALK 188 >UniRef50_C4GBB6 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBB6_9FIRM Length = 199 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + E P ++++ G+GYE+ +P + ++ + V+T+ VR+D L Sbjct: 1 MFSYIQGRVEEINPEGIVLDHDGIGYEIGLPQSSLSQI-RRQMQLRVYTYLQVRDDGFSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++ LFK LI G+GPK AL+IL +S Q A+ + + + PGIGKKT Sbjct: 60 FGFLKREDLDLFKLLIGVGGIGPKGALSILGVLSVDQLRFAIAAGDDKTIAQAPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I++++D+ + S +DD EA+ AL ALGY EA + Sbjct: 120 AQRVILDLRDKIDFTQTLEAQLDSKASDRS-----SDDIRGEAILALNALGYSSAEALQA 174 Query: 181 VSKIARPDASSETLIREALR 200 + + S E LIR L+ Sbjct: 175 IRDLDISSMSVEDLIRAGLK 194 >UniRef50_Q183P4 Holliday junction DNA helicase n=7 Tax=Clostridium RepID=Q183P4_CLOD6 Length = 203 Score = 206 bits (524), Expect = 5e-52, Method: Composition-based stats. Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 8/199 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + E +++E G+GY++++ L + G+ ++T +VRED L Sbjct: 4 MYSYIKGTVEEIYIDSIVVENNGIGYKINVSSNTIMNL-QVGEATKIYTKLIVREDDMSL 62 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF +++E +F+ L + +GPK+AL+ILS S Q + E++G L K PG+GKKT Sbjct: 63 CGFVSREELKMFELLTSVSKIGPKVALSILSFASPAQLGAYILSEDIGKLSKAPGVGKKT 122 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD+ + + T + E+V ALVALGY E+ Sbjct: 123 AERIVLELKDKVDKNNIEFEPTLLSQKPTLISQ-------DESVDALVALGYTLSESKEA 175 Query: 181 VSKIARPDASSETLIREAL 199 V K + ++E +I++AL Sbjct: 176 VQKCKKDGMNTEAIIKKAL 194 >UniRef50_B1I477 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=RUVA_DESAP Length = 202 Score = 205 bits (523), Expect = 6e-52, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 118/202 (58%), Gaps = 3/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++ P V++EVGG+GY V +P + LPE G+ ++T+ V+E A + Sbjct: 1 MIDFLKGRLVSVYPEAVVVEVGGIGYRVQVPPSLAASLPEPGETVFLYTYLSVKETALEM 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+++ +RT F L+ G+GP+ ALA++ + ++ A+ RE+ G L +PGIG K+ Sbjct: 61 FGFSSELDRTAFLLLLGVAGIGPRTALAVVGRLGTRRLWAAILREDTGILTTVPGIGVKS 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE++DR + +A+L + AE EA+AAL++LGY P+EA Sbjct: 121 ARRIMVELRDRLEK---QQVAVSAELPASDGVPVLAGRAENEALAALISLGYTPREAREA 177 Query: 181 VSKIARPDASSETLIREALRAA 202 ++++ + L+ ALR Sbjct: 178 LNRLPDRKLDAAGLVHAALRIM 199 >UniRef50_B4WL13 Holliday junction DNA helicase RuvA n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WL13_9SYNE Length = 207 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 17/209 (8%) Query: 1 MIGRLRGIIIE--KQPPLVLI---EVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MIG ++GI+ + K P +I E GGVGY++ + +LP+ G+ +FTH RE Sbjct: 1 MIGYVKGILADSQKLPNGRVIATVEAGGVGYDMQVNPRTLSQLPQVGEPVRIFTHLQSRE 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 D Q+L+GF++K ER +F+ LI +G+G ++ +++L+ + + + +V L + PG Sbjct: 61 DLQMLFGFSSKAERDVFRLLISVSGIGSQMGMSLLNALGLNELIQSVVNGNARVLTRTPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 +G KTAER+I+E+K + + + +P +++ LVALGY Sbjct: 121 VGNKTAERIILELKTKLSEWR-------SHSGIVAPTGGPISAVQEDVEMMLVALGYSNS 173 Query: 176 EASRMVSKI-----ARPDASSETLIREAL 199 E S+ + + E IREA+ Sbjct: 174 EISKALVAVGNGTALSKSDDVEDWIREAI 202 >UniRef50_Q0W1R7 Holliday junction resolvasome, DNA-binding subunit n=2 Tax=Euryarchaeota RepID=Q0W1R7_UNCMA Length = 201 Score = 205 bits (522), Expect = 9e-52, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 15/208 (7%) Query: 1 MIGRLRGIIIEKQPPL--VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE-DA 57 MI + G I K V+IE GG+GYEVH+P +LP+ G++ ++ H RE D Sbjct: 1 MIAHIEGKIDAKSESEEVVVIEAGGIGYEVHVPTPVLDQLPQEGEDCKLYIHTNFREEDG 60 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 LYGF Q+R F+ L+ +G+GPK+ L I+SG + ++ A+ E++ L ++ G+G Sbjct: 61 TTLYGFATIQDRDFFRLLLTVSGIGPKVGLGIMSGATVEEIAEAIVTEDLKTLTRMNGVG 120 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KKTA+RL++E+KD+ L + D A +AV ALVALGY Q A Sbjct: 121 KKTAQRLVLELKDKVAKLRIMHH---------AKKQVKGDTASADAVDALVALGYSRQVA 171 Query: 178 SRMVSKIARPDAS---SETLIREALRAA 202 S V++ + L+ +LR A Sbjct: 172 SDAVARARDNFTAPPLVNELVVASLRYA 199 >UniRef50_A1UR85 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Rhizobiales RepID=RUVA_BARBK Length = 217 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L GI+ ++++V GVGY V + LPE GQ +F VREDA L Sbjct: 1 MIGKLTGILDSVFEDHIILDVQGVGYVVFLSNRLLSSLPERGQAVSLFIETHVREDAIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E+ F L GVG K+ALAILS + Q A+ ++ + + PG+GK Sbjct: 61 FGFETKVEQDWFCLLQNVRGVGAKVALAILSTLPPPQLAQAITLSDIAMISRSPGVGKMV 120 Query: 121 AERLIVEMKDRFKGLHGDLF------TPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 +ER+I E+K++ + + +++ + +A+AAL LG++ Sbjct: 121 SERIINELKNKALPSNAPHQSMPHFVSYSSETSSQAGTQHTGHQHSMDALAALTKLGFER 180 Query: 175 QEA----SRMVSKIARPDASSETLIREALRA 201 +A + SS LIR +L+ Sbjct: 181 DQATHALQEAIKAFEGETPSSALLIRHSLKL 211 >UniRef50_A4QEN4 Holliday junction ATP-dependent DNA helicase ruvA n=17 Tax=Actinomycetales RepID=RUVA_CORGB Length = 206 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 3/203 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +I +IE GVGYEV +L G+EA+V T VVREDA L Sbjct: 1 MIASLRGTVINIGLSSAVIECNGVGYEVVTTPNTLSQLVR-GEEALVLTTMVVREDAMKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + R +F L +G+GP+LALA S +S + A+ + AL ++PG+GK+ Sbjct: 60 YGFIDNESREMFSVLQTVSGLGPRLALACESVLSPLEISQAITNADAKALQRVPGVGKRM 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLIVE+K + + A + + A+ A++ ++ ALV LG+ +++ Sbjct: 120 ADRLIVELKGKVAAFAAGVVDEAGEQISLPNANIASEVVVEQVSQALVGLGFSEKQSDDA 179 Query: 181 VSKIARPDASSETLIREALRAAL 203 VS + D S +T ALRAAL Sbjct: 180 VSFVLAADPSLDT--SGALRAAL 200 >UniRef50_B2A5L5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVA_NATTJ Length = 214 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 9/210 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG ++E P ++ GG+GY++++P C E+P+ GQE + T+ VREDA L Sbjct: 1 MITRIRGEMLEITPDYCVVMAGGLGYKIYIPDNCQEEIPDPGQEIDLHTYLSVREDAMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ++ +F+ ++ +G+GPK+ALA++ + +F +V ++V L K+PGIGKK+ Sbjct: 61 YGFTSGEQLAVFELIMNVSGIGPKIALALVGTIPPTEFYLSVLNDQVNQLTKVPGIGKKS 120 Query: 121 AERLIVEMKDRFKGLHGD------LFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 A+R+I+E+K++ K + + D E AAL +LGY Sbjct: 121 AQRIILELKEKVKDITSKDAYQDISASEKLDNTGEKLGISTRHKHLDELKAALSSLGYTN 180 Query: 175 QEASRMVSKIAR---PDASSETLIREALRA 201 +E + V I E L+R AL+ Sbjct: 181 REIEKTVDAIQGQITEGQDMEELLRLALQK 210 >UniRef50_C1F8Z2 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Acidobacteria RepID=RUVA_ACIC5 Length = 198 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 13/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ KQP ++E GVGY+V + + F LP G E + H V EDA L Sbjct: 1 MIAHLRGTLLSKQPGQAIVECAGVGYDVAISVPTFTALPAEGAEVRLHIHTQVSEDAIAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +++E+ LF+ LI +GVGPKLA+ +LSG+S ++ V A+ ++ +L ++PG+GKK Sbjct: 61 FGFLDREEKRLFERLITVSGVGPKLAIKMLSGLSPERTVAALRAQDHASLTRIPGVGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VE+KD+ L + ++ ++AL+ LGY+ A + Sbjct: 121 AERLVVELKDKLDDLIAAAPAAGPVAAGPA---------AEDVLSALLNLGYQRPAALKA 171 Query: 181 VSKIARPDA----SSETLIREALRAA 202 + DA + L R AL+ Sbjct: 172 IETAVEKDAAAGEDFDLLFRAALKLI 197 >UniRef50_A6TQM4 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Alkaliphilus RepID=RUVA_ALKMQ Length = 194 Score = 203 bits (517), Expect = 3e-51, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 10/199 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G+I+E Q +++EV G+GY ++ + ++ + GQ + +FTHFV+RED L Sbjct: 1 MFEYMKGMIVEAQIDKIIVEVNGIGYRINSSINSASQV-KIGQVSTLFTHFVLREDEAHL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K+E +FK+LI + +GPK+A ILS + Q+ + + A+ K PG+GKKT Sbjct: 60 YGFVDKEELAMFKKLISVSKIGPKVAAGILSTYTPQRLGAYIVSNDAQAIAKSPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD+ + + + E V AL+ALGY E + Sbjct: 120 AERMILELKDKIDDSQVEYDQNFFNHE---------NKNNNEVVDALMALGYTKHEGEQA 170 Query: 181 VSKIARPDASSETLIREAL 199 S + S+E +IR+AL Sbjct: 171 ASAVRDTSLSTEEMIRKAL 189 >UniRef50_C0WEE9 Holliday junction DNA helicase ruvA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WEE9_9FIRM Length = 201 Score = 203 bits (516), Expect = 4e-51, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG ++G + +E GVGY ++M + + + V+T+ VREDA L Sbjct: 1 MIGFIKGRVDTIGSNYAFVETQGVGYRIYMNTSDLGRMV-LDDKVKVYTYLAVREDALTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF +LI +G+GPK+A ILS F+ A++ +V L KLPGIGKKT Sbjct: 60 YGFLSQEAYGLFTKLITVSGIGPKVAQGILSASKVDDFLLAIKNRDVKFLTKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+KD P + A A E + AL +LGY E S + Sbjct: 120 AERMLLELKD-----LTGPEGPLPESNGGFLAPEGPASALTETMEALASLGYTQNEISGV 174 Query: 181 VSKIA-RPDASSETLIREALRAA 202 +++I D S+E L+++AL+ Sbjct: 175 MNRIKVTADMSAEDLLKKALQVM 197 >UniRef50_C4FZH5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZH5_ABIDE Length = 204 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 1/204 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G + V+I+V G+G E +P T LP+ + + T+ VRED L Sbjct: 1 MIASVKGKLEGVTTESVIIDVNGLGVEAIVPTTVINLLPKIDENIKLHTYLHVREDVMQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K++ FK LI NG+GPK A+AILS M A+ E+ + K GIG KT Sbjct: 61 YGFLEKEDLDFFKLLITVNGIGPKAAIAILSSMPTDILTFAILSEDTKTIQKAQGIGAKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++L++E+KD+ + T + + + + EAV L ALGY EA + Sbjct: 121 AKKLVLELKDKVGIIKTPQNTGSEIYDNAALTIGINSEIKDEAVQVLTALGYSQTEAVKA 180 Query: 181 VSKIAR-PDASSETLIREALRAAL 203 +S + + +SE L++ +L+ + Sbjct: 181 ISTVEMYEEMTSEELVKLSLKNLM 204 >UniRef50_A7I4H5 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I4H5_METB6 Length = 201 Score = 202 bits (514), Expect = 7e-51, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G V+++V G+GY VH+P E+ AG + + T+ VREDA L Sbjct: 1 MIAYLEGTPAATGDRWVVLDVNGIGYRVHVPEPEVREIAGAGTKVKLHTYMAVREDAITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ E LF +I +G+GP++AL ILS +S + FV A+ + +L ++ GIG K Sbjct: 61 YGFLHESELELFTVIIGVSGIGPQIALNILSQISLEDFVLAILSGDEKSLTRISGIGPKG 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E++D+ K + + A D ++A +ALV+LG+ + Sbjct: 121 AKRLILELRDKMKKVQDAMTHTPAGRQ---------DATLRDAASALVSLGFAEAASYDA 171 Query: 181 VSKIAR--PDASSETLIREALRA 201 V+ AR + + +++ ALR Sbjct: 172 VASAARGLAAPTVQEIVKAALRL 194 >UniRef50_D0J979 Holliday junction DNA helicase motor protein n=2 Tax=Blattabacterium RepID=D0J979_BLASP Length = 202 Score = 202 bits (514), Expect = 7e-51, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 118/204 (57%), Gaps = 6/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI LRG +IEK ++I+ GVGY +H+ + L E G+E ++T+ ++E+ + Sbjct: 1 MITHLRGKLIEKNQSSLIIDCNGVGYYLHISSYTYSSLLEEEGKEISIYTYLFIKENQHV 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F LI NG+GP A+ ILS ++ + ++ RE++ ++ GIGKK Sbjct: 61 LYGFFERIERKIFSHLISVNGIGPSSAITILSSLTPHEIKESISREDIEVFNQVKGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+R+I+E+KD+ + ++ ++EA++AL+ LG+ P+E+ + Sbjct: 121 TAQRIIIELKDKISISPSTIPKKGKNVNFFDKPPIF---IKKEALSALIVLGFSPKESKK 177 Query: 180 MVSKIARPDA--SSETLIREALRA 201 ++ +I + + E LI+E+L+ Sbjct: 178 VLEEILDKNPEFTVENLIKESLKK 201 >UniRef50_C6P9B0 Holliday junction DNA helicase RuvA n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P9B0_CLOTS Length = 188 Score = 202 bits (514), Expect = 8e-51, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 16/203 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I+E+ V++E G+G+++ +P + ELP ++T+ V+ED Sbjct: 1 MIDYIKGAIVERGIDYVVVETLGIGFKIIVPTSTLRELPNTNDIIKLYTYLHVKEDGFQF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E +FK+LI NGVGPK A++ILS +S F NA++ + + K PGIGKKT Sbjct: 61 YGFLTINEMEIFKKLIAVNGVGPKAAVSILSTISIDNFYNAIKNGDSKIIEKSPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KD+ + + + DDA ++ + AL++LGY QE+ Sbjct: 121 AQRIILELKDKL--------------FINNAEAVKIDDASEDVLNALLSLGYTRQESISA 166 Query: 181 VSKIARPDASSETLIREALRAAL 203 + I + +E +REAL+ + Sbjct: 167 LYGIDCTN--TENALREALKKLM 187 >UniRef50_Q5NR75 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Zymomonas mobilis RepID=RUVA_ZYMMO Length = 213 Score = 201 bits (513), Expect = 8e-51, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 104/209 (49%), Gaps = 8/209 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL G ++EK +I+V GVGY V + E E V +RED+ L Sbjct: 1 MIARLVGFLVEKNSDSAVIDVNGVGYLVQLSGRALDYFSEIEGEITVHIETQIREDSITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L GVG K ALAIL+ ++ A+ + + + GIG K Sbjct: 61 FGFASYLERDWFRLLTSVQGVGGKAALAILTALTCDAISVAISSGDKTMICRANGIGPKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATD-----DAEQEAVAALVALGYKPQ 175 A+R+I E+K++ + L + + PA + +AV+AL+ LG+KP Sbjct: 121 AQRIINELKEKPAAIALFSSAKGDHLAVEDISQPAASAHHAGNFMADAVSALLNLGFKPA 180 Query: 176 EASRMV---SKIARPDASSETLIREALRA 201 EA R+V S+ A+ ++L+R ALR Sbjct: 181 EAQRVVQLASEELGDQATLDSLVRLALRL 209 >UniRef50_Q2JWZ2 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Synechococcus RepID=RUVA_SYNJA Length = 204 Score = 201 bits (513), Expect = 9e-51, Method: Composition-based stats. Identities = 72/202 (35%), Positives = 101/202 (50%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQ---PPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDA 57 MI L G ++ + + +EV G+GY V P +LP G+ VFTH VVRE Sbjct: 1 MIAFLSGHLVAIEWGERSSLTVEVQGIGYRVKAPARFLKQLPPIGEPVRVFTHLVVRETE 60 Query: 58 QLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIG 117 +LYGF + ER +F ELIK +GVGP L LA+L+ + V AV E V L PG+G Sbjct: 61 LVLYGFGSPAERDVFVELIKVSGVGPALGLALLNTFGLPELVQAVVTENVRLLSLTPGVG 120 Query: 118 KKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 KTA+RL +E+K + L L P + +E AL+ALGY QE Sbjct: 121 HKTAQRLALELKTKLAHWRQGLENADRPLAGGPPPA-----IREEVEMALLALGYSLQEI 175 Query: 178 SRMVSKIARPDASSETLIREAL 199 + + +E +R+A+ Sbjct: 176 QAALQALPSQPRPTEEWLRDAI 197 >UniRef50_B1ZN17 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Opitutus terrae PB90-1 RepID=RUVA_OPITP Length = 200 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 77/203 (37%), Positives = 117/203 (57%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ P ++EV G GYEVH+P+T LP AG + T + RED+Q L Sbjct: 1 MITSIQGTLVSATPLQAIVEVAGFGYEVHIPVTTAERLPAAGAAVKLHTLVIYREDSQTL 60 Query: 61 YGFNNKQERTLFKELIK-TNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF + ER F+ +I+ GVGPK+AL+I+S ++ +A+ +V +L K PGIGKK Sbjct: 61 YGFASPAERDFFRLMIEHVTGVGPKMALSIMSRLALPSLESAIRMGDVASLAKCPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAERL+VE++ + + A+ A ++AVAALVALGY+ +A Sbjct: 121 TAERLVVELRTKVGA----TGAAPGLATQPAAAASPGASAHRDAVAALVALGYRSADADE 176 Query: 180 MVSK---IARPDASSETLIREAL 199 V + A++E+LI++AL Sbjct: 177 AVRRASLALGEAATTESLIKKAL 199 >UniRef50_Q2LRA9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Syntrophus aciditrophicus SB RepID=RUVA_SYNAS Length = 204 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 126/203 (62%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++RG +I K +V+I+ G+GYEV +P++ +YELP+ G E +F + ++D+ LL Sbjct: 1 MIAQIRGKLILKTVSMVIIDNHGIGYEVMIPLSTYYELPDVGSEVSLFVYTFFKQDSILL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF + E+ LFK +I +G+GP+LA+ +LSG+++ + ++A+ ++ L+K+PG+G+K Sbjct: 61 VGFCTENEKQLFKLMISVSGIGPRLAVNVLSGINSSELIHAIANNDLNRLLKVPGLGRKM 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++D+ G + + E++A++AL+ LGYK Q A Sbjct: 121 AQRVILELRDKVSGWTSKEQITFINNKKDAIDQSV---MEEDAISALINLGYKSQAAKDA 177 Query: 181 VSKIAR---PDASSETLIREALR 200 + ++ + S + ++++AL+ Sbjct: 178 IDRVISEGGENKSLDVILKKALK 200 >UniRef50_A8FFR3 Holliday junction ATP-dependent DNA helicase ruvA n=20 Tax=Bacillales RepID=RUVA_BACP2 Length = 201 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 114/204 (55%), Gaps = 5/204 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I P V+IE GGVGY+V+ P Y++ ++ ++T+ ++EDA L Sbjct: 1 MIEFVKGTIDYVCPQYVVIENGGVGYQVYSPNPFIYQI---NKQETIYTYHYIKEDAFSL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ LF +L+ G+GPK ALAIL+ ++A+ERE+ L+K PG+GKKT Sbjct: 58 YGFQTREEKALFTKLLNVTGIGPKGALAILASGDPGAVISAIEREDEAFLIKFPGVGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+++K + + ++ + A EA+ AL LGY +E ++ Sbjct: 118 ARQIILDLKGKLADVVPEMIGNLFN-HEDHIQVETQQTALDEALEALSVLGYGDREIKKV 176 Query: 181 VSKIARP-DASSETLIREALRAAL 203 + + +++ +++AL+ L Sbjct: 177 YPLLKEEKNLTTDQYVKKALQKML 200 >UniRef50_C7M5Z6 Holliday junction DNA helicase RuvA n=2 Tax=Capnocytophaga RepID=C7M5Z6_CAPOD Length = 194 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G ++EK V+I+ GVGY V++ + + LPE G+ ++T+ ++EDA L Sbjct: 1 MITQLQGKLVEKNSTHVVIDCHGVGYFVNISLNTYSALPE-GEAIKLYTYLQIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ER +F L+ +GVG A +LS ++A Q NA+ +V + + GIG KT Sbjct: 60 YGFLTKAEREVFVLLLSVSGVGASTARTMLSALTAAQVRNAIINGDVATIQAVKGIGAKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++++KD+ L P A ++EA+AAL LG+ ++A ++ Sbjct: 120 AQRVVLDLKDKMLKLQDFEEVPM----------NAVSTHKEEALAALEVLGFMRKQAEKV 169 Query: 181 VSKIAR---PDASSETLIREALR 200 V I + + S E +I++AL+ Sbjct: 170 VDIIIKSSSEELSVEEIIKQALK 192 >UniRef50_A5WFC8 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Moraxellaceae RepID=RUVA_PSYWF Length = 210 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 120/206 (58%), Gaps = 7/206 (3%) Query: 1 MIGRLRGIIIEKQ-PPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG + G + P L+ GVGYEV +P+ F +L + A ++TH VREDAQL Sbjct: 1 MIGLIEGRVCHLSAPVACLMTASGVGYEVELPLPDFCQL-QLEAMASLWTHLHVREDAQL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F++LI+ NGVG K+ALA++S SA + + ++ E AL ++PGIGKK Sbjct: 60 LYGFLHPTERDVFRQLIRVNGVGAKMALAMMSTFSATELKHCIDTENDAALTRVPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+RL++E+K +F + D+ A+ + E +AL++LGY+ +EA + Sbjct: 120 TAQRLLIELKGKFDHIQSDMSLLTEVEQQIGIAANSEGVILAEVESALISLGYRDKEAQQ 179 Query: 180 MVSKIARPDA-----SSETLIREALR 200 + DA +++L++ L+ Sbjct: 180 AIKAARETDAGQQLVDTQSLLKLTLK 205 >UniRef50_Q3ZZK6 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Dehalococcoides RepID=RUVA_DEHSC Length = 194 Score = 201 bits (511), Expect = 1e-50, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 103/200 (51%), Gaps = 13/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L GI+ +I V GVG+ +MP T + GQ VFTH VREDA L Sbjct: 1 MISSLNGILEASGKDWAVINVSGVGFRCYMPATSPALIGGLGQRVRVFTHLHVREDALSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E +LF+ LI +G+GPKL LA+LS M+A+ +A+ L +PGIGKKT Sbjct: 61 FGFATTEELSLFETLIDVSGIGPKLGLAMLSVMNAEALASAIISGNAELLSTIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 + R+I+E+KD+ + +A + +A L ALGY EA++ Sbjct: 121 SSRIILELKDKIAK------------NWEAGVLSQVTEANSDILATLTALGYSSSEAAKA 168 Query: 181 VSKI-ARPDASSETLIREAL 199 +S + D E I+ AL Sbjct: 169 ISSLGDNGDLPLEERIKLAL 188 >UniRef50_C9LLE4 Holliday junction DNA helicase RuvA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLE4_9FIRM Length = 201 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 4/200 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG ++G IE GG+GY V + ++ G + T+ VREDA LL Sbjct: 1 MIGYIKGKATVVSKEFCFIEAGGIGYRVFISEMSRQKI-HLGAPVRLLTYMAVREDAILL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E LF LI + +GPK+A+ ILS M FV ++ + L KLPG+GKKT Sbjct: 60 YGFLTQEEYDLFLILISVSKIGPKVAMGILSVMEPADFVLSIRNRNLSVLTKLPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL+VE+KD+ + + P +A L ALGY+ E + Sbjct: 120 AERLLVELKDKVGDF---AEGDIDEPESLAAGKPDESGIAADAAKYLRALGYEDTEIQPV 176 Query: 181 VSKIARPDASSETLIREALR 200 + K++ L+ ALR Sbjct: 177 LKKLSIEYKDVSPLVSAALR 196 >UniRef50_C7H8Z7 Holliday junction DNA helicase RuvA n=3 Tax=Ruminococcaceae RepID=C7H8Z7_9FIRM Length = 202 Score = 200 bits (510), Expect = 2e-50, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G II+K V++ GGVGY V P + LP G+EA ++T V E+ L Sbjct: 1 MIYSLSGKIIKKTLNAVVVSCGGVGYYVQCPTSVAGALPGVGREATLYTVMSVAENDISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++++ F+ L +GVGPK+ LAILS M + A+ + A G+G K Sbjct: 61 YGFATEEQQSCFELLTAVSGVGPKVGLAILSVMEPDRVALAISAGDHKAFKAASGVGPKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+KD+ D T+ + +AALV+LGY EA+ Sbjct: 121 AQRIVLELKDKVAKGFVDGINLEDVGAATAAPAAQGAGQA---IAALVSLGYSQSEAALA 177 Query: 181 VSKIARPDASSETLIREALRAA 202 VSKI E +I+ ALR Sbjct: 178 VSKI-DASLPVEEIIKLALRGM 198 >UniRef50_C4XIJ9 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Desulfovibrionales RepID=RUVA_DESMR Length = 202 Score = 200 bits (509), Expect = 2e-50, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G ++ ++ ++ GGVGYE+ +P LP G + +F H VVREDA Sbjct: 1 MIGYLEGRVVARRDRFAIVLTPGGVGYELELPTPVAAALPAPGGQVSLFVHTVVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + +R F+ LI + +GP+ ALAILS +A + V + ALV++PGIGKK Sbjct: 61 LFGFASLDDRETFRTLIGISKLGPRTALAILSHFTADDLLRVVASGDAEALVRVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A+R+ +E+ + A +P+ P + VA L LGY EA + Sbjct: 121 SAQRIFIELSYKL--------EGRAPAAGLAPSVPIPGGVAGDVVAGLTNLGYPEPEARQ 172 Query: 180 MVSKIA--RPDASSETLIREALR 200 + +++ PD +R+AL+ Sbjct: 173 VAAEVLEAEPDLDVAAALRQALK 195 >UniRef50_A1SJA6 Holliday junction ATP-dependent DNA helicase ruvA n=30 Tax=Actinomycetales RepID=RUVA_NOCSJ Length = 200 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG + ++EVGGVG ++ L GQ+A + T VVRED+ L Sbjct: 1 MIAFVRGQVAAVTLSSAVLEVGGVGLDIMCTPGTLATL-RVGQQAALPTSMVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ E+ F+ L +GVGPKLA A+L+ +S A+ ++V L ++PGIG+K Sbjct: 60 FGFADEDEKQTFELLQTASGVGPKLAQAMLAVLSTDDLRLAITGDDVKTLTRVPGIGQKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++DR P +PA + LV LG+ ++A + Sbjct: 120 AQRIILELRDRIG-------APTGAGRSAGVPAPAGAVWRDQVHQGLVGLGWPVRDAEKA 172 Query: 181 VSKIARPD---ASSETLIREALR 200 V+ +A L+R ALR Sbjct: 173 VAAVAPEAGDVPDVAALLRAALR 195 >UniRef50_Q5I6C8 Holliday junction DNA helicase RuvA n=17 Tax=Bacteroidetes RepID=Q5I6C8_FLAJ1 Length = 193 Score = 199 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 120/203 (59%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G ++EK P V+I+ GGVGY V++ + F +P A ++TH ++EDA L Sbjct: 1 MIAHLQGKLVEKNPTEVVIDCGGVGYHVNISLHTFSLIPNA-DFIKLYTHLQIKEDAHTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF K ER +F+ L+ +G+G +A +LS + +Q +NA+ +VG + + GIG KT Sbjct: 60 YGFVEKSEREIFRMLLSVSGIGAGIARTMLSSIEPRQIINAIASGDVGVIQSIKGIGNKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+++K++ L+ L + + EA++AL LG+ + + ++ Sbjct: 120 AQRVILDLKEKVLKLY----------DLDEVSVVQNNTNRDEALSALEVLGFVRKTSEKV 169 Query: 181 VSKIARPD--ASSETLIREALRA 201 V KI + D A+ ET+I++AL++ Sbjct: 170 VEKIVKEDPEATVETIIKKALKS 192 >UniRef50_B3EU33 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=RUVA_AMOA5 Length = 194 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 13/204 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I K P ++++VGG+GYE+ + + + L + +FT+ + +DA L Sbjct: 1 MIAYIQGSITYKSPTQLIVDVGGIGYELQISLQTYDSLKDIAASCKIFTYLHITQDAHTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E+ F +L+ NG+GP++A+ ILS ++ + A+ + L + GIG+K Sbjct: 61 YGFSTIEEKQCFLQLLSVNGIGPRVAITILSALTPEALQQAIMTHDTITLQAVKGIGQKA 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E++ + + L + QEA+AAL LG A + Sbjct: 121 AQRIILELQGKVGKVGNMLSLQPSGQEA----------IYQEALAALSKLGIHKSTAEKT 170 Query: 181 VSKIARP---DASSETLIREALRA 201 V+ I + + + E+LI+ AL+ Sbjct: 171 VAAILKEHQGEITVESLIKLALKG 194 >UniRef50_C7NI46 Holliday junction DNA helicase subunit RuvA n=2 Tax=Actinomycetales RepID=C7NI46_KYTSD Length = 209 Score = 199 bits (506), Expect = 6e-50, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 9/209 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G I +++EVGGVG V +P E+ GQEA + T VVRED+ L Sbjct: 1 MIASLSGTITHVGLDHLVVEVGGVGMRVLVPPQVAAEV-RTGQEARLETSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + R +F+ + +GVGP+LALA+++ +S + AV E++ AL +PGIGKK Sbjct: 60 FGFLDADTREVFETVQSVSGVGPRLALALVAVLSPAELSRAVHTEDLAALTSVPGIGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL++E+ + G P ++ P+ + AL LG+ +A++ Sbjct: 120 AQRLVLELVGKLPADLGGGAAPTT-TEQSAGGDPSEPAWAPQVRDALEGLGWNTAQATKA 178 Query: 181 VSKIAR-------PDASSETLIREALRAA 202 + P L+REALR A Sbjct: 179 TRTVVEQHAQDTGPPPELPVLLREALREA 207 >UniRef50_Q24UN6 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfitobacterium hafniense RepID=RUVA_DESHY Length = 201 Score = 198 bits (505), Expect = 7e-50, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + E Q ++++V GVGY++ +P + G E I++TH ++RED L Sbjct: 1 MIGMLRGKVWEIQADKLILDVQGVGYQLSIPYGLLGK-AHPGHELILYTHVILREDELAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ E+ LF ++ +G+GPK AL+ILS + Q +A+ E + L K+PGIGKKT Sbjct: 60 YGFSSAAEKELFLLMLSVSGIGPKAALSILSTLGIGQTESAIASENITLLTKVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K++FKG L L A EA+ L+ALG+ +EA + Sbjct: 120 AQRLILELKEKFKGRAIALEGIEGAGSLPQAA------FHSEAMETLLALGFSQEEAKKA 173 Query: 181 VSKIAR--PDASSETLIREALRA 201 + + S+E +R ALR+ Sbjct: 174 LQALPDSAQALSTEEQVRLALRS 196 >UniRef50_Q7NCU2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gloeobacter violaceus RepID=RUVA_GLOVI Length = 206 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 12/207 (5%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI +RG++ E P ++VGGVGY V +LP G+E +FT +VRED Sbjct: 1 MITFVRGMLAEVGPRSGQSWATVDVGGVGYRVWTHARTVGKLPRIGEEVKLFTLMIVRED 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 A L+GF ER LF +L+ +G+GP++ LA+L ++ + V A+ + AL PG+ Sbjct: 61 AMQLFGFLEPGERELFGQLVSVSGIGPRMGLALLETLAPTELVQAILQGNTRALALAPGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G KTA+RL +E++ R + L++ + A+ +E AL+ALG+ P E Sbjct: 121 GAKTAQRLALELRSRLSKWR-------EESGLSAMGARASSRVYEEVELALLALGFAPGE 173 Query: 177 ASRMVSKIARPDASSETLIREALRAAL 203 R + + P + E LRAA+ Sbjct: 174 VVRALDAV-APAMAGEEQTEAWLRAAI 199 >UniRef50_Q0AX15 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=RUVA_SYNWW Length = 199 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 103/204 (50%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + E++P ++I+V GVGYEV++ F LP+ G+ ++ T V E+ L Sbjct: 1 MIAFLKGAVFERRPDSIIIDVNGVGYEVNIHSRLFPRLPQRGEPILIHTFLQVLENEFKL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ E LFK L+ +G+G K ALA+LS M F A+ ++ LV++PG+GKKT Sbjct: 61 FGFLDQDELRLFKTLLTVSGIGSKGALAVLSTMEPLVFYRAIASQDEKTLVRIPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I E++D+ L E + AL LGY E Sbjct: 121 AQRMIFELQDKVPELKLVEVEKEQRP------------LLDELMEALEILGYSRSEVLPA 168 Query: 181 VSKIARP---DASSETLIREALRA 201 + + R E I+ L+A Sbjct: 169 IMDLNRNKQLGNIVEENIKLVLKA 192 >UniRef50_Q2RVF6 Holliday junction ATP-dependent DNA helicase ruvA n=27 Tax=Alphaproteobacteria RepID=RUVA_RHORT Length = 212 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 5/205 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +L+G++ +I+VGGVGY V P LP GQ + VRED L Sbjct: 1 MIAKLKGLVDSVAEDHAVIDVGGVGYLVFCPARVLTRLPSPGQAVALVVETQVREDHISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L GVG K+AL++LS +SA Q A+ + AL + PG+G K Sbjct: 61 FGFLETAERDWFRLLSTVQGVGSKVALSVLSVLSAGQISQAIAAGDKAALGRAPGVGPKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSP----ASPATDDAEQEAVAALVALGYKPQE 176 A R+ E+KD+ L G P + T D +AV+ALV LGY E Sbjct: 121 AARIASELKDKAVALGGMPAPPPRGAGTDAAGEGPPGGPTGDVLGDAVSALVNLGYGRSE 180 Query: 177 ASRMVSKIARPDA-SSETLIREALR 200 A S+ A A + + +I ALR Sbjct: 181 AVGAASRAAGLGATTVQGVIGLALR 205 >UniRef50_D1N374 Holliday junction DNA helicase RuvA n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N374_9BACT Length = 203 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 10/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL GI+ E +I+VGGVGYE +P++ F +LP+ G + + VREDA L Sbjct: 1 MIARLTGILAESSFSGCIIDVGGVGYEALIPLSTFDKLPQPGNKVELHIFTQVREDAITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E+ LF++LI +G+G K+AL++LS M F +A+ ++ +L ++ G+GK+T Sbjct: 61 FGFATPEEKKLFQQLINVSGIGGKIALSVLSSMPVSGFCSAIASGDIKSLSRISGVGKRT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+ + G + A LG+K ++ Sbjct: 121 AERMVVELRDKLGSVAGGSVFVPDAEQGGELTAAAEAALAL------EQLGFKRDAIDKV 174 Query: 181 VSKIARP----DASSETLIREAL 199 + + + +++ L+R+ + Sbjct: 175 LKTLLAELPKSEHTTDKLLRQGI 197 >UniRef50_C7MCB9 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCB9_BRAFD Length = 205 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + +++EVGG+GY V G E + T VVRED+ L Sbjct: 1 MIASLTGRVARIDLDSLVLEVGGIGYLVRTTPQALSA-TRHGAELTLHTELVVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E F+ + +G+GP+ ALA+L+ + ++ AV ++ + + PGIG K Sbjct: 60 FGFPQLEEAETFRIVQSVSGIGPRTALAVLAVLEPEELRRAVAEQDAKTITRTPGIGPKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E+ + P + A A+ + V ALV LG+ + A + Sbjct: 120 AGRMLLELGGKLPAPASLSAVP---GTPAAEAPATPSGADADVVEALVGLGWAEKAALKA 176 Query: 181 VSKIARPD---ASSETLIREALRA 201 V D S L+R ALR Sbjct: 177 VESARADDGAELDSAELLRRALRG 200 >UniRef50_B8CXG3 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Halothermothrix orenii H 168 RepID=RUVA_HALOH Length = 194 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G +I K V++E GGVGY V +P T L G++ +F + VRED+ L Sbjct: 1 MIGYLKGNVIWKAENKVILETGGVGYRVLVPSTV--RLKPVGEKLELFVYTYVREDSLDL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER LF+ L+ +G+GP+ A+ ILS +S ++F+ A+ E+V L ++ GIG KT Sbjct: 59 YGFKTMEERELFETLLSVSGIGPRAAINILSSLSYKKFIEAILTEKVSILKQVSGIGPKT 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RLI+E+K + K + GD P D+ E AL +LGY E Sbjct: 119 AKRLILELKGKLKDMSGDF------------EEPLPDNRNTELSDALASLGYSELEIEEA 166 Query: 181 VSKIA-RPDASSETLIREAL 199 +S + + S E I++AL Sbjct: 167 LSNADIKNNGSLEENIKKAL 186 >UniRef50_B2HN62 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Actinomycetales RepID=RUVA_MYCMM Length = 197 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 105/201 (52%), Gaps = 13/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++E V+IE GVGY V+ + L + G +A + T +VRED+ L Sbjct: 1 MISSLRGEVLEVALDHVVIEAAGVGYRVNATPSTLATLRQ-GTDARLITAMIVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + R LF L+ +GVGP+LA+A LS A A+ +V AL ++PGIGK+ Sbjct: 60 YGFVDGETRDLFLTLLSVSGVGPRLAMATLSVHDANGLRQALADGDVTALTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER++VE++D+ PA + V ALV LG+ ++A Sbjct: 120 AERMVVELRDKVGPAGSAATAPAVNGHT----------VRAPVVEALVGLGFAAKQAEEA 169 Query: 181 VSKIARPD--ASSETLIREAL 199 K+ D A++ + +R AL Sbjct: 170 TDKVLAGDGEATTSSALRAAL 190 >UniRef50_Q8U9K5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Rhizobiales RepID=RUVA_AGRT5 Length = 205 Score = 196 bits (498), Expect = 5e-49, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L+G I E VL++V GV Y + ++ G+ ++F VRED L Sbjct: 1 MIGKLKGSIEEIGADYVLVDVHGVCYVAYCSARTLSKIGSVGEAVVLFIETYVREDQLKL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F L GVG K+ALA+LS +S + NA+ ++ + + PGIG K Sbjct: 61 FGFVSALEREWFNLLQSVQGVGSKVALAVLSTLSPSELANAIALQDKTMISRAPGIGPKV 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL+ E++++ GD + +AV+AL LGY +A+ Sbjct: 121 AVRLVTELRNKAPAFAGDASASIG--LKQELGEGVASAPVADAVSALTNLGYSRDQAANA 178 Query: 181 VSKIAR---PDASSETLIREALR 200 V+ + S LIR L+ Sbjct: 179 VAAALKNGGEGGDSAKLIRLGLK 201 >UniRef50_C4LIX8 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=RUVA_CORK4 Length = 207 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 2/203 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++ V+IE GVGY + L G++A + VR+D L Sbjct: 1 MIDSLHGEVLHVGLNYVVIECSGVGYRATASPSLLGTL-RKGEDARILVTMNVRDDGIDL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F + + R +F L K +GVGP A+AI S +F + E+ L + GIGK+T Sbjct: 60 YAFESDEARQMFAMLRKVSGVGPTSAMAICSIFKPDEFARIITDEDDAELRNVKGIGKRT 119 Query: 121 AERLIVEMKDRFKGLH-GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AER+IV++K + GD + V + + ALV LG+ ++A + Sbjct: 120 AERIIVDLKSKVAVFDSGDSASEPQSGVGGNSEAEVDSGVVGTVTQALVELGFPEKQAEK 179 Query: 180 MVSKIARPDASSETLIREALRAA 202 + A S +++ ALR+ Sbjct: 180 TATSAAAEGGSVSEILKRALRSM 202 >UniRef50_Q4L6Y7 Holliday junction ATP-dependent DNA helicase ruvA n=14 Tax=Bacillales RepID=RUVA_STAHJ Length = 201 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 9/206 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIE-VGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 M +RG + + P V++E + GVGYE+ P + ++ +E +++T +VREDAQL Sbjct: 1 MYAYIRGKLTQLFPTHVVVESINGVGYEIQTPNSYRFQ-KYLEKELVIYTSLIVREDAQL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF N++E+ +F LIK G+GPK ALAIL+ + + A+E E L K PGIGKK Sbjct: 60 LYGFINEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKMAIENENDAYLTKFPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA ++++++K + L+ + + +++ +EA+ AL ALGY +E S+ Sbjct: 120 TARQIVLDLKGKV----QITRETTETLLSMNEENSNSENLVKEALLALEALGYSKREISK 175 Query: 180 MVSKIARPD--ASSETLIREALRAAL 203 V K+ S + ++ L+ + Sbjct: 176 -VEKVLNKSTFDSVDEAVKLGLKTLV 200 >UniRef50_C6X0H6 Holliday junction DNA helicase RuvA n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X0H6_FLAB3 Length = 255 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G + E P V+I+V GVGY V + + +L G+E + ++REDA LL Sbjct: 62 MIYSLKGNVQELNPTSVIIDVNGVGYYVGVSLQTSEKLV-LGKETFLNIQQIIREDAHLL 120 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GFN E+ LF LI NGVGP AL +LS +S Q+ +A+ L K+ GIG KT Sbjct: 121 FGFNTISEKELFNLLISVNGVGPVSALIMLSSLSLQEIASAILSGNSLLLQKVKGIGTKT 180 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+IV+++D+ + ++ + ++ + + EA++AL LG + + ++ Sbjct: 181 AERIIVDLRDKVQKF---------NISEGNISNFVNNKVKDEALSALEVLGIPKKMSEKI 231 Query: 181 VSKIARP--DASSETLIREALRAA 202 + + D S E L+++ L+ Sbjct: 232 ADRFLKTNADLSVEDLVKQILKNI 255 >UniRef50_Q1Q054 Strongly similar to DNA helicase RuvA n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q054_9BACT Length = 196 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ +RG +I K P +++EV GVGY +H+P++ F ++P G E + T +RED L Sbjct: 1 MLDYIRGQVISKSPTKLVLEVAGVGYLLHIPISTFEKIPSRG-EVTIHTQLFLREDGIKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +ER LF+ L+ NGVGP +A+AILSG +A A+ RE+ AL+++ G+GKKT Sbjct: 60 FGFASDEERGLFQLLLSVNGVGPTMAIAILSGSTANDIKCAIAREDTKALMRIKGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E+K+ KG + +A+ AL++LGY A Sbjct: 120 AERIVLELKESVKGAKASIDIEMDGRQRA---------FADDAIMALISLGYGRPVAENA 170 Query: 181 VSKIARPDASS---ETLIREALR 200 V + + S E L+REAL+ Sbjct: 171 VKEAVKKLNSVDNIEVLVREALK 193 >UniRef50_Q5L9Q7 Holliday junction ATP-dependent DNA helicase ruvA n=38 Tax=Bacteroidetes RepID=RUVA_BACFN Length = 201 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 5/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I E P +I+ G+GY V++ + + + + ++ + +REDA +L Sbjct: 1 MIEYIKGEIAELSPATAVIDCNGLGYAVNISLNTYSAI-QGKSSCKLYIYEAIREDAYVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +KQER LF LI +G+G A ILS +S + VN + E L + GIG KT Sbjct: 60 YGFADKQERELFLLLISVSGIGGNTARMILSALSPAELVNVISTENANMLKTVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IV++KD+ K PA A + ++EA+AAL LG+ + + Sbjct: 120 AQRVIVDLKDKIKTGAMAATAVGGAAGALLPAMNA--EVQEEAIAALTMLGFAAAPSQKA 177 Query: 181 VSKIARPDAS--SETLIREALR 200 V I + + E +I+ AL+ Sbjct: 178 VLAILKEEPDAPVEKVIKLALK 199 >UniRef50_C0W3R8 Crossover junction endodeoxyribonuclease n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W3R8_9ACTO Length = 209 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 99/206 (48%), Gaps = 11/206 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +++ +IEVGGVG T L G+E V T VVREDA L Sbjct: 1 MIASLRGTVLDISLTGAVIEVGGVGMAFQATPTTLAGL-RVGEEGTVHTELVVREDALTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L+ GVG KLALAIL+ + A+ ++V AL ++PG+G K Sbjct: 60 FGFADADERQCFRVLLGAKGVGAKLALAILAVHTPDALRRAIASQDVAALKRVPGLGPKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+++ D+ L G A + VAALV LG+ A + Sbjct: 120 AQRVIIDVGDKLGPLTGQDLAAERPQAPAETGEEANP----DVVAALVQLGWNEATARQA 175 Query: 181 VSKIAR------PDASSETLIREALR 200 V + S L+R +LR Sbjct: 176 VGAVESGAQEQGEALSVPELLRASLR 201 >UniRef50_A0JXB2 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Actinomycetales RepID=RUVA_ARTS2 Length = 214 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 11/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG + +I++ G G V+ L G+E +FT +VRED+ L Sbjct: 1 MISFLRGTVAHVGLSSAVIDLNGAGMSVNATPQTLSGL-RTGEEGKLFTSLIVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF++ ER +F L+ +GVGP+LALA+L+ + A + A K+PGIG K Sbjct: 60 FGFSSDDEREVFDVLLSVSGVGPRLALAVLAVHDPEAIRVAAHTGDGKAFTKVPGIGPKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E+ + P +PA+ A+ + + VAA+ +LG+ ++A+ Sbjct: 120 AGRIVLELAGKL--------VPHGTGAAAAPAAAASAPWKPQVVAAMTSLGWSEKDATSS 171 Query: 181 VSKIARPDASSET--LIREALRAAL 203 + K E + E LRA L Sbjct: 172 IDKALSDSPELEAGGQVAEILRATL 196 >UniRef50_C6C065 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfovibrio RepID=RUVA_DESAD Length = 203 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 9/205 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G ++E +I GGVGYE+ + ++ LPE+G + + H V+REDA Sbjct: 1 MIAYIHGKLLEATDKSCIILTPGGVGYELFLTLSAISTLPESGSDVTFYVHSVIREDAFD 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +R +F+ LI + +GPK ALAILS + + V RE+V L +PGIG K Sbjct: 61 LYGFPCFDDREVFRTLISVDRLGPKKALAILSQFGPKDLQDLVFREDVKTLSIVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A +++ +KD+ + L A V + +A++ L LGY E Sbjct: 121 SARQILWSLKDKMETLKSATVRSGACPVEGDRSE------FLDALSGLRNLGYGDDEVRD 174 Query: 180 MVSKIARPDASSET--LIREALRAA 202 + I + + IR AL+ Sbjct: 175 FLKDIFDEEPDLDAGGAIRVALKKI 199 >UniRef50_C0GT45 Holliday junction DNA helicase RuvA n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GT45_9DELT Length = 203 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 100/203 (49%), Gaps = 11/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI +RG ++ L+ G+GYEVH+ +P G+E + T VVREDA Sbjct: 1 MIALIRGTLVSFNDKSCLVMTASGLGYEVHVSAMGLQNMPGQGEELELHTSMVVREDALD 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L+ +GPK ALAIL S Q + E+ AL ++PGIG K Sbjct: 61 LYGFFTRDERETFNVLLNAPKLGPKTALAILGIFSPSQIQKIINTEDEAALTQVPGIGSK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA RLI+++KDR + P +P Q+ +A L +LGY E + Sbjct: 121 TARRLILDLKDRLGFISPQHEDP--------RPAPGPRGVRQDVLAGLTSLGYSAAEVTP 172 Query: 180 MVSKIA--RPDASSETLIREALR 200 ++ ++ PD + IR L+ Sbjct: 173 LLDEVLEKEPDLDVSSAIRAVLK 195 >UniRef50_B2RJ07 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Porphyromonas RepID=RUVA_PORG3 Length = 202 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I+ P ++IE GVGY+V++ +T + + +E +++ ++REDA LL Sbjct: 1 MIEYLKGAIVGLTPTNLVIECAGVGYDVNVSLTTYSAY-QGKKEGLIWITQLIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ K+ERTLF +L +GVGP A ILS + Q+ + + AL + GIG KT Sbjct: 60 YGFSTKEERTLFGQLTSVSGVGPTTARLILSSYAPQELAALITTGQADALKAVKGIGLKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IV++K + + +A + A +EA++AL LG+ + Sbjct: 120 AQRIIVDLKGKIQLETSSDEILSARTAVGDAALNTIASG-EEAISALKMLGFADPAIRKA 178 Query: 181 VSKIARPDAS--SETLIREALR 200 V I D+S E +I+ ALR Sbjct: 179 VKSILSEDSSLAVEDIIKRALR 200 >UniRef50_B1W3G3 Holliday junction ATP-dependent DNA helicase ruvA n=16 Tax=Actinomycetales RepID=RUVA_STRGG Length = 208 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 16/209 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + P +IEVGG+G V +L G+EA + T VVRED+ L Sbjct: 1 MIAFVSGPVAALAPTTAVIEVGGIGMAVQCTPHTLADL-RVGREARLATSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF N ER +F+ L +GVGP+LA A+L+ S AV + AL + GIGKK Sbjct: 60 YGFANDDERQVFELLQTASGVGPRLAQAMLATHSPDALRLAVSTGDEKALTAVSGIGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++L++E+KDR A + +P T + AAL+ LGY +EA Sbjct: 120 AQKLLLELKDRLGE------PVGAHIGQQGIGTPVTSGWRDQLQAALIGLGYASREADEA 173 Query: 181 VSKI---------ARPDASSETLIREALR 200 V+ + L+R AL+ Sbjct: 174 VNAVAPQAEAAVAEGTAPPVPQLLRAALQ 202 >UniRef50_Q5FQC5 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gluconobacter oxydans RepID=RUVA_GLUOX Length = 200 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G++ + + +++V GVGY V LP+ A V +VREDA L Sbjct: 1 MIGQLTGLVGQIEGERCIVDVNGVGYVVSASTRTLAVLPQPPSVARVLIETIVREDAIQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ER F+ L VG K+ALAILS + + + A+ + G+L + G+G + Sbjct: 61 FGFATTDERDWFRLLTTVQSVGAKVALAILSANNPGELLLAINAGDKGSLTRAAGVGPRL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++ E++++ + P +++P + E +A+ AL LG++ EA + Sbjct: 121 ADRILSELRNKVAKM------PGGGGTVSAPGIVSGPSVENDALLALAGLGFRRAEAWPV 174 Query: 181 VSKIA--RPDASSETLIREALR 200 +SK+ +A+ + IR +L+ Sbjct: 175 LSKVLAENENATLDLAIRLSLK 196 >UniRef50_C3J9S7 Holliday junction DNA helicase RuvA n=2 Tax=Bacteria RepID=C3J9S7_9PORP Length = 204 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 7/202 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G I P L++VGGVGY++++ +T + L + A ++ ++REDA LL Sbjct: 6 MIAYIEGKIDRLSPTNALLDVGGVGYDINITLTDYTAL-QGKPSARLWITEIIREDAHLL 64 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ R F++L +GVGP A ILS + + + V L + GIG KT Sbjct: 65 YGFVREESRAFFEKLCSVSGVGPSTARLILSSYTPNDLASIIGNGAVDLLKNVKGIGLKT 124 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++V++K + DL ++ + +P EA AL LG+ + Sbjct: 125 AQRIVVDLKGKIDLSAYDL----SEGMPEGGNAPEVAAVSDEAQRALKMLGFPEAAIRKA 180 Query: 181 VSKIARPD--ASSETLIREALR 200 V + D E +I++AL+ Sbjct: 181 VKAVLGADAHLPVEEVIKQALK 202 >UniRef50_B3DZD2 Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZD2_METI4 Length = 211 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 72/205 (35%), Positives = 115/205 (56%), Gaps = 12/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G +I P +++EV G+G+EV ++ F LP E ++TH V E+ L Sbjct: 12 MISYLKGTLIYSLFPHIIVEVRGIGFEVFCSLSLFRNLPPLYSELTLYTHLEVSENRLEL 71 Query: 61 YGFNNKQERTLFKELI-KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 +GF + +E+ F+ L+ K +GVGP+ AL+IL+ + + AV R + L K+ GIG+K Sbjct: 72 FGFKDLEEQLTFRLLVEKVHGVGPRTALSILNVLPPSELKAAVGRADFRLLSKIKGIGEK 131 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA RL+VE+KD + A+ +S + D ++A+ ALVALGYK EA + Sbjct: 132 TAHRLVVELKDSWA---------TAEASSSSGTAIVGDRVFEDALRALVALGYKEPEALK 182 Query: 180 MVSKIAR--PDASSETLIREALRAA 202 + ++ P E +I+E L+ A Sbjct: 183 RLRRVREKHPQMDLEGIIKECLKLA 207 >UniRef50_Q0F2I8 Putative Holliday junction DNA helicase RuvA n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2I8_9PROT Length = 188 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 17/203 (8%) Query: 1 MIGRLRGIIIEKQP-PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MIG L G + P VL+ GG+GY+V + + +L G+ A + H VRED Sbjct: 1 MIGWLSGTVRALDPAGSVLLVTGGIGYDVSVSVQTLCKL-RLGEAAELSIHTYVREDQIT 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF N ER +F++L +G+G ++AL ++ GMS ++ + A+E + A+ + PGIGKK Sbjct: 60 LFGFANSNEREIFRKLTSVSGIGARMALNLMGGMSIEELIGAIEHADDLAIARTPGIGKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+RLI+E++ + + + A + E +AL LGYKP + Sbjct: 120 TAQRLILELQGKLGSVAAEGG-------------AAISNKADEVRSALTNLGYKPAQIDL 166 Query: 180 MVSKIARPDASSETLIREALRAA 202 + + A E++ R AL+A Sbjct: 167 ALKHV--EPADFESMFRAALKAM 187 >UniRef50_C8NUB4 Holliday junction DNA helicase RuvA n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NUB4_9CORY Length = 207 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G +I +IE GVGY P L G+ V T VVRED L Sbjct: 1 MIDSLNGEVISIGLDHAVIECAGVGYRFLAPPPTLARLVR-GETTRVLTTLVVREDDMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + R++F L +G+GPKLA+A LS + + + + + +PG+GKK Sbjct: 60 YGFTDDDARSMFHRLTAVSGLGPKLAIAALSVFTPGELAAHITSGDAKTIQSIPGVGKKM 119 Query: 121 AERLIVEMKDRFKGL-HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+R+++E+KD+ +GL G + A + P + A ++ V ALV LG+ + A Sbjct: 120 ADRMVLELKDKLQGLYPGAAQSEAPEAAGEVPPISGSSFATEQVVEALVGLGFPEKSARA 179 Query: 180 MVSKIARPDASSET--LIREAL 199 V +A + +E+ L+R AL Sbjct: 180 AVDAVAAENDGAESSVLLRAAL 201 >UniRef50_C2D6U7 Crossover junction endonuclease RuvA n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6U7_9ACTN Length = 214 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 110/208 (52%), Gaps = 8/208 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE-AIVFTHFVVREDAQL 59 MI +L G ++E P V+++V GVGYE+ + LP GQ + +V+E+A Sbjct: 1 MIVQLTGTLVEVFPNSVVLDVQGVGYELGISANTAANLPACGQTAVTLLVRMIVKENAME 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+++QER F LI +GVGPKLALA+LS S E+V + ++PG+GKK Sbjct: 61 LYGFSSRQERNAFDRLIDISGVGPKLALAVLSTYSLSDLATIALSEDVTRMAQVPGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHG-DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+RL++E+ D F + A + +A +AL+A+G+ PQE Sbjct: 121 KAQRLLIELADVFAKDAELRILASAEQKTSGAREQAPQHSVLDDAQSALLAMGFTPQEVE 180 Query: 179 RMVSKIAR------PDASSETLIREALR 200 + + P +++T+I +AL+ Sbjct: 181 LALKPYDKKECNDNPSLTAQTVITQALQ 208 >UniRef50_D1CDK2 Holliday junction DNA helicase RuvA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDK2_THET1 Length = 192 Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 102/200 (51%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G I K ++++VGGVG V P + E+ E G E + TH +VREDA L Sbjct: 1 MIASIKGHIEYKLNDGLIVQVGGVGLRVFTPSSMVREIGEIGDEVYLHTHLMVREDALTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +++ LF+ LI GVGP AL ILS S ++ A+ +E +P IGKK Sbjct: 61 YGFSTREQLRLFELLISVTGVGPNHALNILSSASVEEIQTAIAQENAQFFSLIPRIGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K + + + A ++E V+AL+ALGY EA Sbjct: 121 AARIILELKGKVE--------------PSGEAVQIISHKDEELVSALLALGYTLGEAQAA 166 Query: 181 VSKIA-RPDASSETLIREAL 199 V + + E +R AL Sbjct: 167 VRSLPTDKELPMEEKLRLAL 186 >UniRef50_B5XJ07 Holliday junction ATP-dependent DNA helicase ruvA n=70 Tax=Streptococcaceae RepID=RUVA_STRPZ Length = 198 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 110/203 (54%), Gaps = 7/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++G + + +++E G+GY +++ + Q ++ H V+REDA LL Sbjct: 1 MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFT-HSVNQLVTIYLHQVIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+ + E+ +F +LI +G+GP ALAI++ + VNA++ ++ L+K P IGKKT Sbjct: 60 FGFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNAIDNSDIKYLMKFPKIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++++++ +F + P + ++ A + EA+ AL+ALGY E ++ Sbjct: 120 AQQMVLDLAGKF------VEAPQETGHTKARSNKAGNTQLDEAIEALLALGYTATELKKI 173 Query: 181 VSKIARPDASSETLIREALRAAL 203 + ++E I+ AL+ + Sbjct: 174 RAFFEGTSETAEQYIKSALKLLM 196 >UniRef50_Q4JVD8 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Corynebacterium RepID=RUVA_CORJK Length = 211 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 101/208 (48%), Gaps = 10/208 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG +I+K V IE GVGY+ T ELP G+E V T VVRED+Q L Sbjct: 1 MIASLRGTVIDKGLDYVTIECAGVGYQCSGTATTIAELPR-GEEVFVTTALVVREDSQTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 Y F + E+ F L +GVG +LALAILS ++ Q+ AV + L + PG+GK+ Sbjct: 60 YVFKDADEKRAFATLQSVSGVGARLALAILSVITPQELARAVSNGDHKTLQRAPGVGKRL 119 Query: 121 AERLIVEMKDRFKGLHGDLFT----PAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 AER+ V++K + L T A + D ++ + ALV LG+ + Sbjct: 120 AERMAVDLKGKVADLGEIADTGAVGAAGAVGDGGDGQAVAPDVREQVLEALVGLGFTESK 179 Query: 177 ASRMVSKIAR-----PDASSETLIREAL 199 A + + + L+R +L Sbjct: 180 AGTTIEAVLSQWSAPQAPDASGLLRASL 207 >UniRef50_C7GZ09 Holliday junction DNA helicase RuvA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ09_9FIRM Length = 194 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 8/199 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I EK ++++ G +GY++++P+ + E +E +V+T +VRED L Sbjct: 1 MIKFLRGRIFEKLESCIVLDTGNIGYQINLPLNSPFFTAEISEEVLVYTELIVREDDMSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + + F L+ NGVG K +LA+LS + + A+ ++ + + GIGKKT Sbjct: 61 YGFEDFKTLNFFNLLMNINGVGAKASLALLSVSTVDELARAIASKDTAFISRANGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ +E+ D+ + + +L + + + EA AL++LGY EA + Sbjct: 121 AERIALELSDKVESIAY-------NLPSNNEVTSVVSGNKAEACEALMSLGYNKNEAMNV 173 Query: 181 VSKIARPDASSETLIREAL 199 + + +++ IR+AL Sbjct: 174 LKSL-DEGLDTQSYIRKAL 191 >UniRef50_C7RHH1 Holliday junction DNA helicase RuvA n=5 Tax=Anaerococcus RepID=C7RHH1_ANAPD Length = 195 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + + +IE +GY + + + E E ++T VRED L Sbjct: 1 MISYIIGHVRSIKEDSFIIENNNMGYLIFSSLKTLSNI-EINNEYKIYTSMQVREDDISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E +F L + +GPK+A+ ILS +S + A+ ++ L GIGKK+ Sbjct: 60 FGFFTKDELEMFTLLTSVSTIGPKIAMGILSSISVNEIKTAIINNDIDKLTVAKGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+ D+ K + + ++ A AL+ LGY+ + ++ Sbjct: 120 ASRIILELVDKVKKMDFVPVENIEL-------NSKDNEEIDVAREALLNLGYEKNDVEKV 172 Query: 181 VSKIARPDASSETLIREALRAAL 203 + ++ D S E L++E+L+ + Sbjct: 173 LFELKDTDLSLEGLVKESLKRLI 195 >UniRef50_B2GB19 Holliday junction ATP-dependent DNA helicase ruvA n=11 Tax=Lactobacillus RepID=RUVA_LACF3 Length = 200 Score = 193 bits (490), Expect = 5e-48, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G+I P ++++V GVGY V + Y+ + Q VF + V+EDA L Sbjct: 1 MFEYLTGLITMVSPDFIVVDVNGVGYRVAVANPYAYQ-EDDQQAVQVFIYQAVKEDAITL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF +LI +G+GPK ALAIL+ Q ++A++ + L K PGIGKKT Sbjct: 60 FGFATQAEKRLFTQLIGVSGIGPKSALAILATPDHQGLIDAIQNGDDKYLSKFPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ + ++ P++ D +LGY ++ R+ Sbjct: 120 ASRIIIELKDKVVAVQDEVQLDFTAPGPLGPSAALQDALAAL-----ESLGYTTKQVERV 174 Query: 181 VSKI--ARPDASSETLIREALRA 201 ++ + + S+ + + L+ Sbjct: 175 QKQLEGLQGELSTNDYLSQGLKL 197 >UniRef50_Q6A8K8 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Propionibacterium acnes RepID=RUVA_PROAC Length = 201 Score = 192 bits (489), Expect = 5e-48, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 13/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI G + P V+++ GVG +V P Q+ + T VVRE++ L Sbjct: 1 MISHFSGTVSAAGPTWVVLDNHGVGIKVLCPPATAAS-ARINQDMSLHTSLVVREESLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +R F+ + +GVGPKLA AI+S + A Q A+ E+ L ++PGIG+K Sbjct: 60 YGFVEADDRDAFELVQTASGVGPKLAAAIMSVLDAAQLATAITEEDDATLCRVPGIGRKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+E+KD+ L + + + +P ++ LV LG+ ++A + Sbjct: 120 AAKMILELKDKVAALAPRGASASGATHVAAP-------WREQVAEGLVGLGWSTKDAEKA 172 Query: 181 VSKI-----ARPDASSETLIREALRA 201 V K+ A P S L+R ALR+ Sbjct: 173 VDKVVALKEADPAMSIGNLMRAALRS 198 >UniRef50_C6XF74 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XF74_LIBAP Length = 207 Score = 192 bits (489), Expect = 5e-48, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 3/205 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+++G I VLI+V GV Y ++ P+ L + G +F +R+D L Sbjct: 1 MIGKIKGNIEGLYEDYVLIDVQGVCYIIYCPIRTLSCLGKIGDFCTLFVETHMRQDQIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +R F L GVG ++A+ +LS ++A + V ++ + + ++PGI K Sbjct: 61 FGFLSDLDRQWFMLLQSVQGVGARVAMGVLSRITATELVESIILQNSKVIAQIPGISMKI 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++ E+K + L + + + + A++ALV LGY +A+ Sbjct: 121 ASRIMTELKGKAISLSSVVQQDMSCVNKEQAHICSMPSFAINAISALVNLGYGQDQATTA 180 Query: 181 VSKIARPDASSET---LIREALRAA 202 V + + + + +IR ALRA Sbjct: 181 VVSVLKKEKNIADDSQIIRLALRAI 205 >UniRef50_Q729U3 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Desulfovibrionaceae RepID=RUVA_DESVH Length = 202 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 87/193 (45%), Gaps = 8/193 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G + E ++ GGVGYEV +P LP+ G F VREDA Sbjct: 1 MIAYVEGRLAEVAGNACVVVTDGGVGYEVFVPGHTLARLPDKGGRVSFFISTEVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF ER F L + VG K LAILS V ++V AL ++ GIGKK Sbjct: 61 LYGFATWDERQTFIVLTSISKVGAKTGLAILSQFRPDDLRRLVVEDDVLALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K P A ++A+A L LGY +EAS Sbjct: 121 TAQHIFLELKYKLKVEDLPAAAPLVTGG-------APGGVFRDALAGLANLGYGEEEASH 173 Query: 180 MVSKIARPDASSE 192 ++ + + + Sbjct: 174 VLKDVLHGEPDLD 186 >UniRef50_D2RLD5 Holliday junction DNA helicase RuvA n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RLD5_ACIFE Length = 204 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 4/202 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG + G + L++ GVGY + + + + Q+ ++T+ VREDA L Sbjct: 1 MIGFITGRVDHIGTNFCLVDTQGVGYRIFLNTGDLSRI-QVDQKVKIYTYLSVREDALQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + +LF +LI +G+GPK+A ILS F AV+ ++ L KLPGIGKKT Sbjct: 60 FGFLSYDAYSLFTQLITVSGIGPKVAQGILSAAKVDAFYLAVKSRDLKFLTKLPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+KD + A P T L LGY E +++ Sbjct: 120 AERLLLELKDMTGPEGLEEEGTAGGFDGDVPEDDTTTLGA--VAEGLSYLGYTQGEIAQV 177 Query: 181 VSKIARPDAS-SETLIREALRA 201 + K+ S +E L++EALR Sbjct: 178 LKKLKVTADSRAEDLLKEALRL 199 >UniRef50_UPI000050F77A Holliday junction DNA helicase, RuvA subunit n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F77A Length = 206 Score = 191 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 14/202 (6%) Query: 2 IGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY 61 I L G + ++I GVG V++ G + + T VVRED+ L+ Sbjct: 10 ISFLSGTVHRIAADHLVILTYGVGRRVNVTPDTLSN-TRHGADIELVTTLVVREDSMTLF 68 Query: 62 GFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTA 121 GF + E F+ L+ +G+GP+LA+AILS M + A+ ++ AL ++PGIGKK A Sbjct: 69 GFGTEDENHTFEVLLSISGIGPRLAMAILSVMGPGELAAAISNQDANALTRVPGIGKKGA 128 Query: 122 ERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMV 181 R+I+E++++ L P A Q+ V ALV LG+K +A+ +V Sbjct: 129 SRIILELENKLPKLSASEPGPQLSFG----------GANQQVVDALVGLGWKEAQAADVV 178 Query: 182 SKI---ARPDASSETLIREALR 200 ++ +A + L++ +L+ Sbjct: 179 QEVVNDLGQNAGTSALLKASLK 200 >UniRef50_A5CX58 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Vesicomyosocius okutanii HA RepID=A5CX58_VESOH Length = 202 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 124/200 (62%), Gaps = 6/200 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G I+EK PP +L+EV +GYE+ M+ FY + + ++ ++TH ++E+A +L Sbjct: 3 MIGKLSGTILEKNPPEILLEVDKIGYEILCSMSSFYAMGDE-EQLSLYTHLSIKENAHIL 61 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K E+TLF+ELI+ NG+GPK+ALAILS + + + L K PGIG KT Sbjct: 62 YGFISKDEKTLFRELIRINGIGPKVALAILSHLDINSLIKVITDGNDTLLAKTPGIGIKT 121 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++LIVE+KDR + L + + ++A AAL ALG+K +E+ +M Sbjct: 122 AQKLIVELKDRLEKLKLNNEN-----HKNIHIKFKKNPNIKQASAALQALGFKARESEKM 176 Query: 181 VSKIARPDASSETLIREALR 200 +S I S++ LIR+AL+ Sbjct: 177 LSVIKDNSLSTKALIRQALQ 196 >UniRef50_C5VM52 Holliday junction DNA helicase RuvA n=5 Tax=Bacteroidales RepID=C5VM52_9BACT Length = 205 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 10/208 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVV----RED 56 MI +RG + + P L ++E GVGY +++ + + + + ++ H + R+D Sbjct: 1 MIEYIRGELADLTPALAVVEAHGVGYALNISLNTYSAI-QGKTAVKLYVHEAIMTGGRDD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF NKQER+L++ LI +GVG A ILS ++ + N + + L + GI Sbjct: 60 NYTLYGFANKQERSLYRLLITVSGVGANTARMILSSLTPAELCNVIANGDEKMLKTVKGI 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G +TA+R+IV++KD+ + + EAV+AL LG+ P Sbjct: 120 GLRTAQRIIVDLKDKI---MQSGIADELHVSSQPNTPAVNAAIKDEAVSALTMLGFSPAP 176 Query: 177 ASRMVSKIA--RPDASSETLIREALRAA 202 ++++V I +PD E +++ AL+ Sbjct: 177 SAKVVVSILTEQPDLPVEQVVKLALKMI 204 >UniRef50_B3DRX9 Holliday junction ATP-dependent DNA helicase ruvA n=18 Tax=Bifidobacteriaceae RepID=RUVA_BIFLD Length = 208 Score = 191 bits (485), Expect = 1e-47, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 14/210 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + + LI+VGGVGYEV M T L AGQ+ VFT+ + +DA L Sbjct: 1 MIGMLTGRVESVETDTALIDVGGVGYEVRMSATDLSRL-HAGQDTRVFTYMNLSQDAITL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ + F +LIK +G+GPK+A ++LS ++ Q +A+ + AL K PG+GKK Sbjct: 60 HGFLDRDAKKTFLQLIKVSGIGPKVAQSLLSTLTPSQLAHAIADNDATALAKAPGLGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+K DL + + D ++ V L++LG++ Q+A + Sbjct: 120 AQKIILELKGSI-----DLSQIEGASAQAATSKSPVDTGTEQVVEGLISLGWRQQDAQQA 174 Query: 181 VSKIARPD--------ASSETLIREALRAA 202 V++ + ++R AL Sbjct: 175 VAEACAENDIPTPLATDDVPRVLRLALALM 204 >UniRef50_B8DNJ8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Desulfovibrio RepID=RUVA_DESVM Length = 202 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 8/193 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G + E ++ GGVGYEVH+P LPE G + VREDA Sbjct: 1 MIAYVEGRVAEISGNACVVVTEGGVGYEVHLPAHTLSRLPERGGQVAFHVRTEVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF+ ER F L + VG + ALAILS V ++V AL ++ GIGKK Sbjct: 61 LFGFSTWDERQTFMVLTTISKVGARTALAILSQFRPDDLRRLVVEDDVLALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K A A ++A+A L LGY EA+ Sbjct: 121 TAQHIFLELKYKLKVEDLPAGLVLAGG-------AAPGGVFRDALAGLGNLGYLEDEAAP 173 Query: 180 MVSKIARPDASSE 192 ++ ++ + + + Sbjct: 174 VLKEVLKAEPDLD 186 >UniRef50_B0NYV4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYV4_9CLOT Length = 190 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 68/192 (35%), Positives = 113/192 (58%), Gaps = 5/192 (2%) Query: 13 QPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLF 72 P +V+++ G+GY++ +PM P+ GQE ++TH VRED L+GF +K+E+ F Sbjct: 2 SPGMVVVDNHGIGYQMMVPMRG-ESFPKIGQEIKIYTHMHVREDDVSLFGFLSKEEKEAF 60 Query: 73 KELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRF 132 + LI NG+GPK+ L++LS +S + AV E+V + K PG+G K A++LI+E+KD+ Sbjct: 61 ELLIGVNGIGPKVGLSVLSTLSVYELKMAVISEDVKTISKTPGLGPKGAKKLILELKDKL 120 Query: 133 KGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIAR-PDASS 191 + A++ TS S D+ + LV+LGY EA+ V+K+ D + Sbjct: 121 SFEELEEDGVGAEIFDTSADS---SDSVMITIEGLVSLGYSKSEAAIAVNKVEDAKDLTP 177 Query: 192 ETLIREALRAAL 203 E L+++AL+ + Sbjct: 178 EELLKKALKNIM 189 >UniRef50_B0S1J4 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Finegoldia magna RepID=RUVA_FINM2 Length = 198 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 8/201 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G+I E +++E +GY++ + F + A E V+T FV REDA +L Sbjct: 1 MYSYIIGVITEVHENYIVLENNNIGYKIFITD-FFRDNVSAFDEYKVYTEFVEREDASIL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++ER LF L +GPK A+ ILS M+ + A+ +++ L + PG+GKKT Sbjct: 60 YGFSSQKERELFNLLTDVTSIGPKYAMNILSTMTVDECKTAIITDDIKLLTQAPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K++ + P V S S A AL+ LGY + Sbjct: 120 ASRIILELKEKIEKDFVPSEKPVNKEVKRSNDSEF-------AREALLQLGYFKNDVDAF 172 Query: 181 VSKIARPDASSETLIREALRA 201 + S E ++++A+++ Sbjct: 173 IENTDISGLSIEDIMKKAMKS 193 >UniRef50_C1A615 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=RUVA_GEMAT Length = 197 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 112/202 (55%), Gaps = 14/202 (6%) Query: 1 MIGRLRGIIIEKQPPLV-LIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI ++RG I+ ++ V ++ GV YE +P++ F LP GQ + TH VVREDA Sbjct: 1 MISQVRGTIMHRELDRVEIMTASGVAYECLIPLSVFESLPSEGQTVTLHTHLVVREDAWH 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER +F++L+ GVGP LAL ILS ++ + V A+ ++V L+++P +G+K Sbjct: 61 LYGFAHAYERAVFQKLLHAKGVGPALALGILSALTPDRVVRALHEKDVLTLMRVPRVGRK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AE++I+++ D+ + T A L +AV AL+ALGY EA R Sbjct: 121 KAEQIILDLADKIDAVGPAPATGTAPSPLG-----------DDAVRALIALGYNQTEADR 169 Query: 180 MVSKIARPDA--SSETLIREAL 199 V + A +L+R AL Sbjct: 170 AVRAVVESGAPKDVSSLVRGAL 191 >UniRef50_A0LUK6 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Actinomycetales RepID=RUVA_ACIC1 Length = 196 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 15/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + P V++EVGG G ++ G+ A T VVRED+ L Sbjct: 1 MISFVSGRVAAVTPDSVIVEVGGFGVQLLATPATIAR-ARVGERARFATSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ERT+F+ L +GVGP+LALA+L S AV E+V AL +PGIG+KT Sbjct: 60 YGFADDDERTVFELLQTASGVGPRLALAMLGVHSPTALRAAVATEDVKALALVPGIGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+I+E+KDR ++ A+ +T A L+ LGY ++A Sbjct: 120 AQRIILELKDRL-------------GTPSTAAAESTSGWRDAVHAGLLNLGYTARQADEA 166 Query: 181 VSKIARP-DASSETLIREALRAAL 203 ++ IA D S+ ALR AL Sbjct: 167 IAAIAGELDDSAAVDTATALRLAL 190 >UniRef50_B8J094 Holliday junction DNA helicase RuvA n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J094_DESDA Length = 204 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 7/193 (3%) Query: 1 MIGRLRGIIIEKQPP-LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI L G + E +LI GVGY V +P LP G+ ++T VREDA Sbjct: 1 MIAYLEGRLAETWGNTCLLITENGVGYAVALPAHTLSVLPGRGEHLALYTSLAVREDALE 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF +ER F+ LI + VG + AL+ILS + V E+V AL ++ GIGKK Sbjct: 61 LFGFATFEERQTFEVLISISKVGARTALSILSIYRPEDLRRIVFEEDVMALTRVSGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+ + +E+K + K + + ++ + L LGY E + Sbjct: 121 TAQHVFLELKYKLK------VDDVPQAAVLASTGERPGSVFRDVLDGLANLGYAEDECAP 174 Query: 180 MVSKIARPDASSE 192 MV K+ + + Sbjct: 175 MVKKLLHEEPDLD 187 >UniRef50_Q3ABX9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RUVA_CARHZ Length = 195 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 11/201 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G +++K V+++V G+G++V + L E +++T VRED L Sbjct: 1 MIAVLKGKVLDKTLDSVVVDVNGIGFKVAVLPRELGSL-NLNSEVVMYTSLQVREDGWFL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++++ R F L+ +G+GPK ALAIL+ + ++ + ++ AL K+PG+GKK Sbjct: 60 YGFSDEETRKFFDLLLSVSGIGPKAALAILNEFTPEKLNWVIANKDEKALTKVPGVGKKN 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL +E+KD+ + D + L++LG EA + Sbjct: 120 AQRLFLELKDKIG---------YTSFTSNEESVENFQDLWGDVYKGLLSLGLSAAEAREI 170 Query: 181 VSKIARPD-ASSETLIREALR 200 + KI + + E I ALR Sbjct: 171 LGKIDKKSVKTPEEGIALALR 191 >UniRef50_C9RMJ7 Holliday junction DNA helicase RuvA n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMJ7_FIBSS Length = 202 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 76/203 (37%), Positives = 114/203 (56%), Gaps = 6/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG++++K P V++E GVGY V++ +LPE G E I+ T+ VVRED+ L Sbjct: 1 MIERIRGVLVQKSPTFVVVECAGVGYGVNISAFTAGKLPEEGAEVILHTNLVVREDSMTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ LF L++ NGVGPKLA ILSG + +N + + AL K+ G+GKKT Sbjct: 61 FGFADTTEKNLFLMLLEVNGVGPKLAQRILSGSTPADLLNMIASDNKSALGKIKGLGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 E++ + +K++ + L + + A A+ EAV AL LG K A + Sbjct: 121 CEQMTLTLKEKASNMLQALGDVEGSGITSVG---ALTGAKLEAVLALHTLGVKDPAAEKA 177 Query: 181 VSK---IARPDASSETLIREALR 200 V K + A + LI EAL+ Sbjct: 178 VVKAVEVLGDGADAAALIPEALK 200 >UniRef50_Q252Y0 Holliday junction ATP-dependent DNA helicase ruvA n=14 Tax=Chlamydiaceae RepID=RUVA_CHLFF Length = 207 Score = 189 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 M +RGI+ ++IE G+G+ + EL +E IV+T+ VVRE + Sbjct: 1 MYDYIRGILTYMSSGTMVIECQGLGFSICASDRWLMELAGLLHREVIVYTYTVVRETEHV 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF ++ ER F+ LI +GVGPK LAIL+ + + + E+V AL +PGIGKK Sbjct: 61 LYGFRSRGERECFRMLISFSGVGPKTGLAILNTFALSKLCSIARAEDVKALASVPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAE+L+V++K + L D + PA ++ + AL ALGY A R Sbjct: 121 TAEKLMVDLKQKLPEL------LPLDSQTLTSWKPAKPSCMEDGIQALAALGYPKSSAER 174 Query: 180 MVSKIARP---DASSETLIREALRAAL 203 M+++ +AS ++ AL+ L Sbjct: 175 MIAEAITELPDNASLAEILPIALKKNL 201 >UniRef50_D1C4E7 Holliday junction DNA helicase RuvA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4E7_SPHTD Length = 193 Score = 189 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG I K P +VLI++ G+ V T +L E G A ++TH VRED L Sbjct: 1 MISGVRGPIHAKYPGIVLIDLHGLIIRVLTSQTTVDDLGEVGDHAELYTHLRVREDDITL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF+ +E LF+ L GVGP++AL ILS ++ +E E++ AL ++PGIGKKT Sbjct: 61 YGFSTPEELQLFELLTSVTGVGPRVALNILSSARPEEVHRVIESEDIAALSRVPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E++ + G A + + +ALGY EA Sbjct: 121 ASRIILELRGKLPAPAGAQAPALAAADAEAMEAL-------------MALGYTAPEARDA 167 Query: 181 VSKIAR-PDASSETLIREALR 200 +++I R + E + AL+ Sbjct: 168 LARIERHEGQTVEERVYAALQ 188 >UniRef50_B1MCJ1 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Actinomycetales RepID=RUVA_MYCA9 Length = 202 Score = 189 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 16/205 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G +I+ V+IE GVGY V+ L G + + T +VRED+ L Sbjct: 1 MIASVNGEVIDIALDHVVIEAAGVGYRVNATPATLSTL-RRGTQIRLITAMIVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + R LF L+ +GVGPK+A+A L+ A A+ +V AL ++PGIGK+ Sbjct: 60 YGFTDTDARDLFTTLLGVSGVGPKIAMATLAVYDAPTLRQALADGDVAALTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ AA T + V AL+ LG+ ++A + Sbjct: 120 AERLVLELREKVA---------AAPGGTTELGRGTASLVRSQVVEALIGLGFAAKQAEQA 170 Query: 181 VSKIARPD------ASSETLIREAL 199 + D A ++R AL Sbjct: 171 TDTVLAQDNPGDTGADVSGVLRSAL 195 >UniRef50_Q1AWE1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RUVA_RUBXD Length = 196 Score = 189 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 10/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RLRG ++EK P V+++ GGVGY P++ LP G+E +V T VVREDA LL Sbjct: 1 MIDRLRGQLVEKDPEGVVVDCGGVGYRAAAPLSTLRALPAVGEECVVHTRMVVREDAMLL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++ER F L + VGP+LALA+LS M+ Q + A R +V +PG+G+KT Sbjct: 61 FGFATREEREAFDALTSVSKVGPRLALAVLSAMTPGQMMEAAARGDVHRFAAVPGLGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++ R AA A+ D EA AL LGY +EA R Sbjct: 121 AERLVLELRGR---------ELAAAGGGGGVAAGEGDGPFMEAREALTGLGYSLEEAERA 171 Query: 181 VSKIARPDASSETLIREALRAA 202 + + P + E I+ ALR Sbjct: 172 LRDVP-PQETVEQYIKAALRKI 192 >UniRef50_B0VHI7 Holliday junction DNA helicase RuvA n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHI7_9BACT Length = 202 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 12/204 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + K P L +IE G+G+E+ +P++ + +LP AG+ + T+ + +D + Sbjct: 4 MIQYISGTLTFKTPVLAIIETMGIGWELKIPISTYEKLPTAGKPCKLLTYLHISQDDIRI 63 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER LF L K G+GPK+AL+ILS +S F+ AV E G L ++PGIGKK+ Sbjct: 64 FGFATEAERELFVMLNKVGGIGPKIALSILSTLSIPTFIKAVNSGEEGLLTRVPGIGKKS 123 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR- 179 A+RLIVE+KD L + + D E +AL++LG+ + + Sbjct: 124 AQRLIVELKDDVHKLLNHIDQKELQIG----------DVSSEVESALLSLGFNLHQIRKE 173 Query: 180 -MVSKIARPDASSETLIREALRAA 202 + + ++E LI+E ++ Sbjct: 174 LALMDESMQKLNTEELIKEIIKRI 197 >UniRef50_Q6MKB7 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Bdellovibrio bacteriovorus RepID=RUVA_BDEBA Length = 196 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 78/201 (38%), Positives = 108/201 (53%), Gaps = 13/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 MIG LRG IIE LI+V GVGYE+H +L G + IV+ H VREDA Sbjct: 1 MIGYLRGKIIEVMNDSALIDVSGVGYEIHASSNTLGDLQALLGNDIIVWIHTHVREDALQ 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF++K+E+ LF L+K NGVGPK+AL+ILSG Q +E AL LP +GKK Sbjct: 61 LFGFHDKEEKNLFLSLLKVNGVGPKMALSILSGGRPAQIHEMIEAGNAKALSGLPKVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAE++I+ +K + + + A A + +AL+ LGYK Q + Sbjct: 121 TAEQIILTLKGKLVSIEE-----------GGVVAKAKSVAHTQITSALLNLGYKSQLVDQ 169 Query: 180 MVSKIARPDASSETLIREALR 200 VS + D + E IR+ + Sbjct: 170 FVSSLPA-DIAVEDGIRKGFQ 189 >UniRef50_B7K970 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Cyanothece RepID=RUVA_CYAP7 Length = 209 Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 16/210 (7%) Query: 1 MIGRLRGIIIEK-----QPPLVLIEVGGVGYEVHMPMTCFYELP-EAGQEAIVFTHFVVR 54 MI L+G + ++++EV +GYE+ +P L E Q +FTH +R Sbjct: 1 MINYLKGKTTQILKTPSNRNILILEVNHIGYEIQIPSRLARNLSLEEDQIVQIFTHLQIR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 ED Q+LYGF+ ER LF++LI NGVG + A+A++ + + +NA+ +V L K P Sbjct: 61 EDQQILYGFSTDSERDLFRQLININGVGTQTAIALIDTLGIEALINAIVTNDVKTLSKTP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+G KTAER+ +E+K + A L + + +E L+ALGY Sbjct: 121 GVGPKTAERIALELKSKLSQWE-----QAIALKTPVSVGVPSREILEEVEMTLLALGYTD 175 Query: 175 QEASRMVSKIARPDA-----SSETLIREAL 199 +E + +S I++ + E ++ A+ Sbjct: 176 EEIDQAISAISQDNLLLKNPHVEEWLKSAI 205 >UniRef50_A8RC90 Putative uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=A8RC90_9FIRM Length = 193 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 17/200 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++GII ++IE G+GY +++ L E I++T+ VREDA L Sbjct: 1 MIAFIKGIIHSYSNDSLIIENNGIGYRIYISNPQSVRL---NSEVILYTYQHVREDAITL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +E LF +LI GVGPK ALA+L+ +Q + A+E +V L LPGIG K+ Sbjct: 58 FGFTTMEEHDLFLQLISVKGVGPKTALAMLAVCPVKQMIEAIEHNDVKLLKSLPGIGAKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + ++ ++ +A+ AL ALGYK E + + Sbjct: 118 ASQIVLDLKGKLVEEVSEIQVKENAELV-------------DAIEALKALGYKNAEINSI 164 Query: 181 VSKIARPD-ASSETLIREAL 199 +++ A+S+ IR+AL Sbjct: 165 KKELSEESFATSDQYIRKAL 184 >UniRef50_A8YTI1 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Lactobacillales RepID=RUVA_LACH4 Length = 196 Score = 189 bits (480), Expect = 6e-47, Method: Composition-based stats. Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 10/193 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GI+ P ++++V GVGY+V+ P Y + G +A +F VVR+ L Sbjct: 1 MYEYFEGIVTVITPSYIVVDVNGVGYKVYSPTPFAY---QKGDKAKIFIEQVVRDTGITL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ++ LF +L+ +G+GPK ALAI++ A A+E+ EV L + PG+GKKT Sbjct: 58 YGFQSEDDKGLFLKLLSVSGIGPKSALAIMAAEDANSLAEAIEQGEVKYLTRFPGVGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K + + A L A +A+ AL+ALGY +E R+ Sbjct: 118 ASQIVLDLKGKLRDY-------VARLDRQDEEQGNISPALNDALLALIALGYTQKEVDRI 170 Query: 181 VSKIARPDASSET 193 +K+ +A + Sbjct: 171 TTKLEEVNADTAD 183 >UniRef50_D1PT53 Crossover junction endoribonuclease subunit A n=6 Tax=Prevotella RepID=D1PT53_9BACT Length = 206 Score = 188 bits (479), Expect = 7e-47, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVV----RED 56 MI ++G + E P L ++E GG+GY + + + + ++ + + ++ H + R+D Sbjct: 1 MIEYIQGELTELTPALAVVETGGIGYALSISLNTYDDI-QGKKAVKLYVHEAIQTGGRDD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF +KQER L++ LI +GVG A +LS ++ ++ NA+ + + GI Sbjct: 60 NYTLYGFASKQERELYRMLITVSGVGANTARTMLSSLTPKELCNAIANGNEKLIKSVKGI 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G KTA+R+IV+++D+ + + + S + EAV+AL LG+ P Sbjct: 120 GLKTAQRVIVDLRDKI--VSSGIAEVLHAGTPDTKVSAVNTAVKDEAVSALTMLGFSPAP 177 Query: 177 ASRMVSKIARPDAS--SETLIREALRAA 202 A++ V+ I E +++EAL+ Sbjct: 178 ATKTVTAILTEQPDMVVEMVVKEALKRI 205 >UniRef50_C8W783 Holliday junction DNA helicase RuvA n=2 Tax=Atopobium RepID=C8W783_ATOPD Length = 210 Score = 188 bits (479), Expect = 7e-47, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 4/204 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE-AIVFTHFVVREDAQL 59 MI +L G ++ P + +++V GVGYE+ + + LP+AG+ V T VVRED+ Sbjct: 1 MIVQLTGTLVSVTPSVAVLDVNGVGYELGISASTAAALPQAGEAGVTVLTRMVVREDSME 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF +++ER LF L +GVGPKLAL++LS + QQ V + L + G+GKK Sbjct: 61 LFGFASREERALFDRLRAISGVGPKLALSVLSTFTPQQLAVIVATNDGNRLKSVSGLGKK 120 Query: 120 TAERLIVEMKDRFKGLHG--DLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEA 177 AERLI+E+ D F L + S P E EA+ AL+ +G+ QEA Sbjct: 121 KAERLIIELSDVFAKDTELKQLVGLTSPTDFASIPKPTVTSVESEAIEALLGMGFTSQEA 180 Query: 178 SRMVSKIARPDA-SSETLIREALR 200 + + A + E I ALR Sbjct: 181 TLALEGYEEVGAITIEAAIGYALR 204 >UniRef50_C0W1Q3 Possible crossover junction endodeoxyribonuclease n=2 Tax=Actinomyces RepID=C0W1Q3_9ACTO Length = 195 Score = 188 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +G + +P +++ GG G + + + ++ G+ ++T +VRED+ L Sbjct: 1 MISFFQGEVQAIKPGHLVLVNGGFGLSIQVTVGTANQV-RHGELVGLYTSLIVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F L + +GP+ AL L ++ + AV + L ++PGIGKK+ Sbjct: 60 YGFLTEDERDTFNVLQTVSKIGPRTALQALEALTPDELRQAVISSDEKTLQRIPGIGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+ D+ G++ V + E +A LV+LGY A Sbjct: 120 AQRMLIEIGDKLGTPTGNVKLGTTVSVAET-----------EVIAGLVSLGYSEVSAQAA 168 Query: 181 VSKIARPDASSETLIREAL 199 V D ++ ++R AL Sbjct: 169 VEPFQGSDMNTSEMLRAAL 187 >UniRef50_B0TF69 Holliday junction DNA helicase ruva n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TF69_HELMI Length = 274 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 57/162 (35%), Positives = 89/162 (54%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ +L++V GVGY V +P T LP+ G++ ++ T + RED L Sbjct: 1 MIAFLRGRLVGLGDDCLLLDVSGVGYRVFVPATMLASLPQVGRDILIHTFYYAREDQVSL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E F+ L++ +GVGPK+ L ILS S + A+ E+V AL ++PGIG+KT Sbjct: 61 YGFLTEEELAFFRLLLEVSGVGPKVGLGILSAYSVVEVQRAIIAEDVLALTRIPGIGRKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQE 162 A+RL++E++D+ AS D + Sbjct: 121 AQRLVIELRDKLLKQGVRAVPVFGVDPFLEEASSQEQDQNAQ 162 >UniRef50_B6YR38 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=RUVA_AZOPC Length = 196 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 12/204 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I+E P V+IE G +GY + + + ++ L + + ++ + V+RE+ L Sbjct: 1 MLDFIKGEIVELIPDSVIIETGNIGYMLFISLNTYFSLTKI-KSCKLYIYEVIREETHQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF +K+ER LF LI GVG +A +LS +S + + V AL L GIG KT Sbjct: 60 FGFIDKKERQLFTHLISVPGVGANIARMVLSSLSVCELEEIIFSGNVSALQALKGIGNKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+++KD+ K P + + + + +EA+ AL+ LG+ + ++ Sbjct: 120 AERIIIDLKDKVK--------PDNIPSSDTIITNISSNITKEAITALITLGFSQSASQKV 171 Query: 181 VSKIARPDAS---SETLIREALRA 201 V+KI ++S E +I++AL+ Sbjct: 172 VNKIVSNNSSSTTIEQIIKKALKL 195 >UniRef50_B6XV05 Putative uncharacterized protein n=2 Tax=Bifidobacterium RepID=B6XV05_9BIFI Length = 210 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 17/207 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + +IEVGGVGYE MP + AGQ V+T V +DA L Sbjct: 6 MIGMLHGQVDSIDAASAIIEVGGVGYETRMPSADLASM-HAGQTVKVYTSLNVSQDAITL 64 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + +F +L K +G+GPK+AL++LS + ++ AV + AL K PG+GKK Sbjct: 65 YGFSSLASKRMFLQLQKVSGIGPKVALSLLSTLPPERLARAVADGDATALAKAPGLGKKG 124 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+K + +P + + ++ V L++LG++ Q+A Sbjct: 125 AQKIILELKGSIDLSQIEGASPETRSTEDTGS--------EQVVEGLMSLGWRQQDAVHA 176 Query: 181 VSKIARP--------DASSETLIREAL 199 V ++ D ++R AL Sbjct: 177 VQEVCESNHIDIPLGDDDVPRVLRLAL 203 >UniRef50_A5UZS3 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Chloroflexi (class) RepID=RUVA_ROSS1 Length = 197 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 10/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RGI+I V++E GG+G+ ++ P L + G +FT+ +VRED+ L Sbjct: 1 MIASIRGILIAVAADHVVVETGGIGWMIYAPRPVIAALGDIGATVRLFTYLLVREDSLTL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++R LF+ L+ GVGP+ AL +LS + + A+ +V L + P IGKK Sbjct: 61 YGFETVEQRQLFETLLSVTGVGPQAALNLLSSGTTDELRLAIATGDVTRLARTPRIGKKL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+K + L + +PA A E AL++LG+ EA+ Sbjct: 121 AERLVLELKGKI---------NVKGLPTGAAVTPAVAAANAELSEALISLGFTDAEAAAA 171 Query: 181 VSKIARPD-ASSETLIREALR 200 ++ + E +R ALR Sbjct: 172 IAALPSDAPPDLEERVRLALR 192 >UniRef50_D0LZE6 Holliday junction DNA helicase RuvA n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZE6_HALO1 Length = 210 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 106/208 (50%), Gaps = 6/208 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRLRG ++E++ +V++E GGVGYEV + + LP G+ + E L Sbjct: 1 MIGRLRGTLVEQEGSMVIVECGGVGYEVTVSIHTLQSLPAEGEPVTLRIFTHALESRVAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMS-AQQFVNAVEREEVGALVKLPGIGKK 119 YGF + ER LF LI VGP A+ ILS S + + E +L +L G+GKK Sbjct: 61 YGFGSTLERDLFDLLITVKKVGPSSAVGILSAGSGPAEIAEMIANGETSSLTRLRGVGKK 120 Query: 120 TAERLIVEMKDR----FKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 TAE L+VE++++ AA + + E AL+ LG++ Q Sbjct: 121 TAEMLVVELREKCELLLATHRVQGGRAAARAPAAAARPSSRGPLLDEVAQALLQLGWRQQ 180 Query: 176 EASRMVSKI-ARPDASSETLIREALRAA 202 ++VS++ + S E+L+R+ALRA Sbjct: 181 SVDQVVSELAPTAEDSLESLLRQALRAM 208 >UniRef50_A5GTL6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Synechococcus sp. RCC307 RepID=RUVA_SYNR3 Length = 208 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 102/207 (49%), Gaps = 11/207 (5%) Query: 1 MIGRLRGIIIEKQPP----LVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L G I ++ +L+ G VGYE+ + + + V TH RED Sbjct: 1 MIGWLHGTIGDRWQEGNRCWLLLICGPVGYELQVSESLWRG-TALESPTTVHTHLQQRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 Q LYGF K +R LF+ LI NGVGP++AL ++SG+ A + A+ E+V L + PG+ Sbjct: 60 GQQLYGFETKADRNLFRLLISVNGVGPQVALGLISGLGAVSLLQAMAAEDVKVLCQAPGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL +E + R + ++ A +E A L ALGY P+E Sbjct: 120 GKRTAERLSLEWRSRLQERWQQQGGSTPLRLVEPVAES------RELRATLEALGYGPEE 173 Query: 177 ASRMVSKIARPDASSETLIREALRAAL 203 S V++ E + E LR L Sbjct: 174 VSAAVAQAGSQGLDPEQPMEEWLRHCL 200 >UniRef50_A5CEJ4 Holliday junction ATP-dependent DNA helicase ruvA n=17 Tax=Rickettsieae RepID=RUVA_ORITB Length = 205 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 106/203 (52%), Gaps = 5/203 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVREDAQL 59 MI +L+GI+ ++I++ GVGY+V+ +L E G +F VRED Sbjct: 1 MIAKLKGILDSITDSYLIIDINGVGYQVYSSGKTLMKLIKEEGSIVSLFIETHVREDRIH 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF + E+ F L +G+G K+AL ILS ++ Q A+ + L + G+G K Sbjct: 61 LFGFLDNTEKVAFNMLQSVSGIGTKMALHILSNLTPHQLQIAISSQNRHQLKAISGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +RL++E++D+ ++ + ++ T S D+ +A+ AL+ALG EA++ Sbjct: 121 LIDRLMIELRDKVANINTIANNTSLAILSTD--SNTHDNILSDAITALIALGISRAEATQ 178 Query: 180 MVSKIAR--PDASSETLIREALR 200 ++S I P S L+R AL+ Sbjct: 179 ILSDIYALFPSISVNELVRTALQ 201 >UniRef50_C1D1T9 Putative Holliday junction ATP-dependent DNA helicase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D1T9_DEIDV Length = 202 Score = 187 bits (476), Expect = 2e-46, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 8/200 (4%) Query: 2 IGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY 61 I L G++ E + +I GGVGYEV P +L GQ A + T FVVREDAQLL+ Sbjct: 5 IAYLSGVVREVRENSAVIVAGGVGYEVQCPAGTLGKLV-VGQNAELSTRFVVREDAQLLF 63 Query: 62 GFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTA 121 GF++ LF + +GVGPKL L++LS M + +V L + G+GKKTA Sbjct: 64 GFSDADSLKLFDLVTGVSGVGPKLGLSLLSAMPVSALAQGLMAGDVKLLSSVSGVGKKTA 123 Query: 122 ERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMV 181 ERL++E++++ PA + A+P + A ++A+ AL+ALG++ + +V Sbjct: 124 ERLVLELQNKVPEHLAAAGVPAG-----TRATPVSSTAGRDAIEALLALGFREAQVRGVV 178 Query: 182 SKIARPDA--SSETLIREAL 199 +++ D S++ LIR+ L Sbjct: 179 AELLGADPTQSADALIRKGL 198 >UniRef50_B8ZUI1 Holliday junction ATP-dependent DNA helicase ruvA n=12 Tax=Mycobacterium RepID=RUVA_MYCLB Length = 203 Score = 186 bits (473), Expect = 3e-46, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 11/205 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG ++E +IE G+GY V+ + L + G +A + T VVRED+ L Sbjct: 1 MIFSVRGEVLEVALDHAVIEAAGIGYRVNATPSALATLRQ-GSQARLVTAMVVREDSMTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + R LF L+ +GVGP+LA+A L+ A A+ +V +L ++PGIGK+ Sbjct: 60 YGFSDAENRDLFLALLSVSGVGPRLAMATLAVHDAAALRQALADSDVASLTRVPGIGKRG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+++E++D+ P LT + + V ALV LG+ ++A Sbjct: 120 AERIVLELRDKVG--------PVGASGLTVGTAADGNAVRGSVVEALVGLGFAAKQAEEA 171 Query: 181 VSKIARPDASSETLI--REALRAAL 203 ++ + + + ALRAAL Sbjct: 172 TDQVLDGELGKDGAVATSSALRAAL 196 >UniRef50_Q0ALX8 Holliday junction ATP-dependent DNA helicase ruvA n=8 Tax=Alphaproteobacteria RepID=RUVA_MARMM Length = 213 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 11/210 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + ++++V GVGY V L E Q+ ++ VREDA L Sbjct: 1 MIGMLTGRVAALGADELVLDVSGVGYLVGAGARTLSRL-EPDQDIVLHIETHVREDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +R F L GVG K A AIL + + NA + + G+G K Sbjct: 60 YGFLDDIDRAWFVHLQNIQGVGAKAAFAILDTVPVSEIANAAALGDKSTFARAKGVGPKL 119 Query: 121 AERLIVEMKDRFKGLH-------GDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYK 173 A R+ E+KD+ + A ++AV+ALV LGY Sbjct: 120 ATRIATELKDKAPPTGRSFSIGLPVHSDDGTTGGAPVAPAGGDSLAREDAVSALVNLGYN 179 Query: 174 PQEASRMVSKIARP---DASSETLIREALR 200 +A + V+KI R +A +IR +L+ Sbjct: 180 ESQARQAVAKILRDADSEAPLGDVIRLSLK 209 >UniRef50_UPI000196B988 hypothetical protein CATMIT_00479 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B988 Length = 204 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++GII ++I+ G+GYEVH+ ++ G +A V+ + V+ED L Sbjct: 19 MYSYIKGIIAGLYSDHIVIDNHGIGYEVHVSNPYNFK---KGDDATVYIYQQVKEDDLTL 75 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E+ LF++LI G+G K A+ IL+ ++A+E + + L K+PGIG K Sbjct: 76 FGFKKKEEKELFQKLILVKGIGCKTAIGILATGEIDAIIDAIEGKNIAYLKKIPGIGPKA 135 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++ +F P +EA L+ALGYK + + Sbjct: 136 AQQIILDLHGKFDKRAMK---------------PLGSPDYEEATEVLIALGYKQSDVEKA 180 Query: 181 VSKIARPDASSETLIREAL 199 + ++ + + ++ AL Sbjct: 181 MKVLSSENLDTNGYVKRAL 199 >UniRef50_A8LHP9 Holliday junction ATP-dependent DNA helicase ruvA n=32 Tax=Alphaproteobacteria RepID=RUVA_DINSH Length = 224 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 105/219 (47%), Gaps = 18/219 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIGRL G+++ + ++++V GVGY V +P G +FT +VRED L Sbjct: 1 MIGRLSGVLVYRGRDHIVLDVRGVGYVVQCSERTLAGMPAPGGPVALFTELLVREDLLQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E+ + L GVG K +++ILS + A+ + GAL K G+G K Sbjct: 61 YGFPTLLEKEWHRLLTSVQGVGAKASMSILSTLGVDGVGRAIALGDWGALRKAQGVGPKI 120 Query: 121 AERLIVEMKDR--------------FKGLHGDLFTPAADLVLTSPASPATDDAEQE---A 163 A+R++ E+KD+ G+ D + + S A PA A + A Sbjct: 121 AQRVVNELKDKGPEVMAMGGTLEAALDGVIEDGMAASEGIEPPSAARPAVPSAASDQAGA 180 Query: 164 VAALVALGYKPQEASRMVSKIARPDASSE-TLIREALRA 201 ++ALV LGY EA+ V+ A A E +IR ALR Sbjct: 181 LSALVNLGYGQGEAASAVATAAGEGAVGETDIIRAALRL 219 >UniRef50_A8SLR3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLR3_9FIRM Length = 200 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 2/201 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + ++I+ GG+GY++ + + G ++T ++V+ED L Sbjct: 1 MYEYISGELKFIYNDYIVIDNGGIGYKIFTSNNTLFNVT-VGDYYTIYTDYIVKEDYVAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF E ++FK L+ N +GPK+A ILS MS + + AL G+GKKT Sbjct: 60 FGFKTMDELSMFKLLVSVNSIGPKVACGILSSMSVDSLKLTIVNGDAVALATAKGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+E+KD+ + + + ++ S + + AL+ LG+ + R Sbjct: 120 AQKIILELKDKIS-IDSISSKDISGMEASTLDSGKDLEKRELVSDALINLGFMKNDIERF 178 Query: 181 VSKIARPDASSETLIREALRA 201 +S I + E +I+ +++ Sbjct: 179 LSSINIDEMEIEDIIKLSMKK 199 >UniRef50_C0ABP1 Holliday junction resolvasome DNA-binding subunit-like protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0ABP1_9BACT Length = 219 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 1/161 (0%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G++ E P ++E+ G GYEV++P+T +LP G + + T + REDAQ L Sbjct: 1 MITSIQGLLTEATPLRAVVEINGFGYEVNIPVTTAEKLPAVGAKVKLHTIVIYREDAQTL 60 Query: 61 YGFNNKQERTLFKELIK-TNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 YGF + +ER F+ +I+ +GVGPKLAL I+S MS A+ ++ +L K PGIGKK Sbjct: 61 YGFASPEERDFFRLMIEQVSGVGPKLALTIMSRMSLPVLEGAIRAGDISSLSKCPGIGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE 160 TAERL+VE++ + + +SP Sbjct: 121 TAERLVVELRAKVGASPAGGDAGSPVAGDGGTSSPPPPPPR 161 >UniRef50_A9GQJ8 Holliday junction DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GQJ8_SORC5 Length = 244 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 16/208 (7%) Query: 2 IGRLRGIIIEKQPPL-VLIEVGGVGYEVHMP------MTCFYELPEAGQE-AIVFTHFVV 53 IGRL G ++E+ V+++V GVGYEV +P +AG + +F H V Sbjct: 38 IGRLSGHVVEEGDEGTVVLDVSGVGYEVTVPLGAVGRARGIAANAKAGSDAITLFVHTHV 97 Query: 54 REDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKL 113 REDA LLYGF +++R F+ LI + +GPK+A+AILS + A + + R E L + Sbjct: 98 REDALLLYGFATREDRAAFRVLIGISSIGPKIAMAILSALGAGELAAVITRRETARLTAI 157 Query: 114 PGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYK 173 PG+GKKTAERL++E+KD+ L PAA L + AT + +AL +GY+ Sbjct: 158 PGVGKKTAERLVLELKDKLVHL------PAAPLSPAASPPVATGAKQDLLHSALTRMGYR 211 Query: 174 PQEASRMVSKIAR--PDASSETLIREAL 199 P EA R V+ + A L+R+AL Sbjct: 212 PAEAERAVTALGARVDSAPLGDLVRDAL 239 >UniRef50_B1C6M7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6M7_9FIRM Length = 199 Score = 183 bits (466), Expect = 2e-45, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 107/204 (52%), Gaps = 9/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 M ++G + + + + IE GVG+ +++ +L ++ V+T+ VRE+ Sbjct: 1 MFDYIKGDVTDIREGYLTIENKSGVGFLLNVSENTATDLINDREDVKVYTYMAVRENDVS 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF+ ER +F +L+ +GPK+AL+ILS +S V A+ ++ +L G+GKK Sbjct: 61 LFGFSTLFEREIFFKLLTVPKIGPKIALSILSALSPNMIVAAIMNKDYKSLCTANGVGKK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 AE+++V ++D+F L D+ +D + EA+ L +LG+ A++ Sbjct: 121 AAEQIVVTLQDKFGDLPEIEEITVNDM-------NINNDLKDEAILGLTSLGFDRAYAAK 173 Query: 180 MVSKIA-RPDASSETLIREALRAA 202 +V +I+ D + E ++ AL+ Sbjct: 174 IVREISVDDDLTIEDILSLALQKV 197 >UniRef50_C3RKD6 Holliday junction DNA helicase subunit RuvA n=3 Tax=Bacteria RepID=C3RKD6_9MOLU Length = 188 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 16/199 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G ++E +++E G+GY +++ Y G+E +F + V+EDA LL Sbjct: 1 MYSYLIGTVVEMNIDHIVVENSGIGYLIYVNNPYEYT---RGKEIKIFLYQQVKEDALLL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E+ +F +LI G+G K A+ IL+ ++A+E V L K+PGIG K Sbjct: 58 YGFKTSEEKEMFLKLILVKGIGCKTAIGILATGDVTSIISAIETGNVAYLKKIPGIGPKA 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I++++ +FK + + ++ EA L+ALGYK E + Sbjct: 118 AQQIILDLQGKFKN-------------TPTATTLINNNDLDEAAEVLIALGYKKSEVDKA 164 Query: 181 VSKIARPDASSETLIREAL 199 ++ + + ++ AL Sbjct: 165 LAVLLNEKLDTNGYVKRAL 183 >UniRef50_A5EXH7 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Dichelobacter nodosus VCS1703A RepID=RUVA_DICNV Length = 204 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 83/201 (41%), Positives = 117/201 (58%), Gaps = 9/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L+G ++ KQ +LI V GVGYE+ +P + + G+E VF H V RED Q L Sbjct: 1 MIGWLQGRVLYKQNDQLLINVCGVGYELTVPQSVMAS-AQVGEELTVFVHHVQREDGQFL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ +R LF+ELI+ +G+GPKL++ ILSG++ + + AV +E ++L GIGKKT Sbjct: 60 YGFSSFLQRQLFRELIRVSGIGPKLSIVILSGLTPEALIAAVRAQESAPFLRLSGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+ DR + L S +P A +EA+ AL+AL P EA Sbjct: 120 AERLLIELHDRVEKNDLFLCD-----ESESSRAPIALSASEEAIQALIALELAPAEAELW 174 Query: 181 VSKI---ARPDASSETLIREA 198 V K DA S LI+ A Sbjct: 175 VKKAQKTLAEDADSAALIKTA 195 >UniRef50_Q2FPZ9 Holliday junction DNA helicase RuvA n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FPZ9_METHJ Length = 195 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 112/201 (55%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI R+RG++I + V++E GG+GY + +P + + + E I++T ++R+D L Sbjct: 1 MIARIRGLVIGYETGSVIVEAGGIGYRIRVPESVLTSITK-DDEIILYTELIIRQDLMQL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E +F+ LI + +GP+ LAI+S +S + +A+ ++ L ++ G+GKK Sbjct: 60 YGFYTPEETEMFRLLISVSHIGPQTGLAIISRLSLPEICDAISSKKPEILSQVQGLGKKG 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E++ + L P +P + Q+AV AL++LGY +EA Sbjct: 120 AERIILELQKKVSELKIQY-----------PQTPTSSTKIQDAVLALLSLGYSREEAMGA 168 Query: 181 V--SKIARPDASSETLIREAL 199 + S + SS L+REAL Sbjct: 169 LERSALDTETVSSSELVREAL 189 >UniRef50_A9NF61 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Acholeplasma laidlawii PG-8A RepID=RUVA_ACHLI Length = 186 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M ++GI+ + P +++E GVGY V P+ Y++ G+E V T+ VRED L Sbjct: 1 MYRYIKGIVTQINPQHIVVENNGVGYLVLSPVPYQYKI---GEETTVVTYLHVREDIFQL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF +LI +G+GPK A++I++ + + A+E + L K PGIG K+ Sbjct: 58 YGFKDEETLNLFLKLISVSGIGPKSAMSIVAFDDTNKIIAAIETSDAKYLTKFPGIGMKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K + D+ D ++ AAL ALGY +E ++ Sbjct: 118 AQQIILDLKGKLVNDELDMQLL--------------SDNSKDVAAALEALGYNKKEIAKS 163 Query: 181 VSKIARPDASSETLIREAL 199 + + D ++EAL Sbjct: 164 LKHV-NFDQDLNKALKEAL 181 >UniRef50_D0GJ52 Holliday junction DNA helicase RuvA n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GJ52_9FUSO Length = 213 Score = 183 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 9/209 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y++ + + F L E GQ+ ++ H V+ED Sbjct: 1 MFEYIFGELTVKKIDYVALDINGLAYKIFISLKTFEALGETGQDEKLYVHTHVKEDDISF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI T+GVGPKL LAILS + + +N V K+PG+G K Sbjct: 61 YGFKTENERELFKALISTSGVGPKLGLAILSTYNVKDVINIVIESNSKLFTKVPGLGDKK 120 Query: 121 AERLIVEMKDRFKGL------HGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 A+++I+++KD+ K L + + + +++ ++ +++ AL +LGY Sbjct: 121 AQKIILDLKDKVKKLNIIETYNENGEISKGNPIVSDTSNTKILLMKEDIKLALESLGYLN 180 Query: 175 QEASRMVSKIARPDASSETLIREALRAAL 203 + S+ + + S I EA+++ L Sbjct: 181 ADVSKWIK---DEELSQINDIGEAIKSIL 206 >UniRef50_C7LQQ8 Holliday junction DNA helicase RuvA n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQQ8_DESBD Length = 198 Score = 183 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 13/203 (6%) Query: 1 MIGRLRGIIIEKQPPL-VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI L G ++ + VL+ GGVGY++H+ LP AG A +F H +VREDA Sbjct: 1 MIAYLEGTVLRRDEESCVLLTAGGVGYQLHLTSDGLAALPGAGDTARLFVHTLVREDALT 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+ F++ +ER F L+ +GPK ALA+L S + + +E+V AL ++PGIG K Sbjct: 61 LFAFSSWEERQAFVTLLGAPKLGPKTALAMLGCYSPAELAACIAKEDVAALSRVPGIGAK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA+R L + L + A + AALV+LGY E Sbjct: 121 TAKR----------LLLDLKDKLVSSPSLLPGRTAPAPTASADCAAALVSLGYGRHEVDE 170 Query: 180 MVSKI--ARPDASSETLIREALR 200 +V + PD + + IR+AL+ Sbjct: 171 VVRVVFEKEPDLDAGSAIRQALK 193 >UniRef50_Q7V7T9 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Cyanobacteria RepID=RUVA_PROMM Length = 225 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 18/218 (8%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G +E V++ GVGYEV + E+ I++ H V R+D Sbjct: 1 MIGWLQGQKVEAWQQGTRQGVVLACAGVGYEVQIAPRHLSEMEHGQNTFILWIHQVQRDD 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF ++ER +F+ LI +GVGP++ALA+L + V A+ + ++ L + G+ Sbjct: 61 GSSLFGFPERRERDMFRTLIGVSGVGPQMALALLEECQTGELVEAIVQGDLRKLCQAQGV 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL VE++ + + + D + E L LGY+ E Sbjct: 121 GKRTAERLAVELRTKLAEFSCRDPGMSLVDNGVIDSHQLKDSSLHELQITLGGLGYEDLE 180 Query: 177 ASRMVSKIARPDA--------------SSETLIREALR 200 R + +A A ++ +R +LR Sbjct: 181 IRRAIRAVASGAAIGASDMPESVPSIDDTDAWLRASLR 218 >UniRef50_D1VUW2 Holliday junction DNA helicase RuvA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUW2_9FIRM Length = 198 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 6/202 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I E ++++ +GY + + +L +E ++ ++RED L Sbjct: 1 MLDFIKGNISEIYEGEIVLDNNDIGYLISISQLDISKL-SLNEELKIYLRLILREDNISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK RTLF L + VGPKL++ IL + + Q +A+ E+ L K PG+GKKT Sbjct: 60 YGFLNKDSRTLFDLLNTVSSVGPKLSMTILGALGSSQLRSAILSEDANILTKSPGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+KD+ + L + D A+ AL++LGY EA Sbjct: 120 ANRIILELKDKISKKSFTEDLDLSILDSSD----TIDINNDPALEALLSLGYNEYEAKIA 175 Query: 181 VSKIARPDASSETLIREALRAA 202 + + + +IR+AL+ Sbjct: 176 LRNV-DQNQELSEIIRQALKVM 196 >UniRef50_A3CR11 Holliday junction ATP-dependent DNA helicase ruvA n=49 Tax=Firmicutes RepID=RUVA_STRSV Length = 196 Score = 182 bits (462), Expect = 7e-45, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M +GII + +++EV +GY +H+ Y + QEA V+ H VVREDA+LL Sbjct: 1 MYEYFKGIISKITAKYIVLEVNSIGYILHVANPYAYS-GQLHQEAKVYVHQVVREDAELL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ LF LI +G+GP ALAI++ V A+E++ + L K P IGKKT Sbjct: 60 YGFATEEEKQLFLSLISVSGIGPVSALAIIAADDNAGLVQAIEQKNITYLTKFPKIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A++++++++ + + +P A + +EA+ A++ALGYK E ++ Sbjct: 120 AQQMVLDLEGKV-------VAAGSPAESKAPVQTADNQELEEAMEAMLALGYKAAELKKI 172 Query: 181 VSKIARPDASSETLIREALRAAL 203 ++E I+ AL+ + Sbjct: 173 KKFFEGTTDTAENYIKSALKMLV 195 >UniRef50_Q1GE12 Holliday junction DNA helicase RuvA n=12 Tax=Rhodobacterales RepID=Q1GE12_SILST Length = 229 Score = 182 bits (462), Expect = 7e-45, Method: Composition-based stats. Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 23/224 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L G + K P V+I+V GVGY V+ LP G+ ++T +VRED L Sbjct: 1 MIGKLTGRLDYKTPDHVMIDVRGVGYIVYCSDRTLASLPAVGEAVQLYTELLVREDLMQL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ + L GVG K++LAILS + + A+ + A+ G+G KT Sbjct: 61 FGFTSLVEKEWHRLLTSVQGVGAKVSLAILSALGPEGVSRAIALGDWAAVKAAKGVGPKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPA---------------------TDDA 159 A+R+++++KD+ + T L + A Sbjct: 121 AQRIVLDLKDKAPSVMAMGGTVTEALEGPELDAVVEPAAEAPAKPARKAAPKAPTGAAAA 180 Query: 160 EQEAVAALVALGYKPQEASRMVSKIARPDASS--ETLIREALRA 201 A++AL LGY P +A+ V++ A + + LIR ALR Sbjct: 181 SAGALSALGNLGYGPSDAAGAVAEAAANNPDAGEAELIRAALRL 224 >UniRef50_Q8YZT2 Holliday junction ATP-dependent DNA helicase ruvA n=20 Tax=Cyanobacteria RepID=RUVA_ANASP Length = 213 Score = 181 bits (461), Expect = 9e-45, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 17/209 (8%) Query: 1 MIGRLRGIIIEKQP---PLVLI--EVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MI L+GI+ Q V++ EV G+GY++ +P +LP G +FTH+ VRE Sbjct: 1 MISYLKGIVAGIQNVGSNRVILTLEVNGMGYDLQIPQRLAKQLPTTGDLVQIFTHYQVRE 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 + LLYGF++ ER LF+ L+ +GVG A+A+L + V A+ V L++ PG Sbjct: 61 EIPLLYGFSSPAERDLFRHLLSVSGVGAASAIALLDTLELPDLVQAIIAANVQILIQAPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 +GKK AER+ +E+K + A +E L ALGY Sbjct: 121 VGKKIAERVCLELKAKLIEWRKSAGFFVA-------TEGPAPGILEEVQMTLFALGYTAH 173 Query: 176 EASRMVSKIAR-----PDASSETLIREAL 199 E S + ++ DA E I++A+ Sbjct: 174 EVSHALHVVSEDIGLPKDAYVEDWIKQAI 202 >UniRef50_B4R9Z1 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Caulobacteraceae RepID=RUVA_PHEZH Length = 204 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE-DAQL 59 MIGRLRG++ E LI+V GVGY V LP G+E ++ V E Sbjct: 1 MIGRLRGLVAEVGEEDALIDVMGVGYVVRCGSRTLSRLPAVGEETVIHVESVFGEQTGVT 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + ER F L GVGPK ALA+L ++ + AV RE+ A+ + G+G K Sbjct: 61 LYGFLGRDERRAFVTLRTIQGVGPKAALAVLDVLAPPELAAAVAREDKAAVARANGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 A+R++VE+KD+ AA + P A EAVAAL+ LG +A R Sbjct: 121 LAQRIVVELKDK----PISDGPVAAFHAQATTPQPIKVSAAGEAVAALMGLGIAEPQARR 176 Query: 180 MVSKI---ARPDASSETLIREALR 200 +V +A LI+ AL+ Sbjct: 177 VVESAALRLGEEAEPPALIKAALQ 200 >UniRef50_UPI000038343B COG0632: Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038343B Length = 182 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 2/166 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG+L+G++ V+++V GVGY VH LP+ G+ + VRED L Sbjct: 1 MIGKLKGLVDSYGEDFVILDVNGVGYVVHCSARTLQRLPKPGEATDLAIETHVREDMIRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F+ L GVG ++AL +LS + + A+ + GA+ + PG+G + Sbjct: 61 YGFRSDAEREWFRLLQTVQGVGTRVALGVLSVLEPEALATAIATGDKGAIARAPGVGPRL 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAA 166 A RL+ E+KD+ PA + + +A++A Sbjct: 121 AARLVAELKDKAPAFAP--IDPALVALTGAVEDRTAPQPVADAISA 164 >UniRef50_C0QZY1 Holliday junction DNA helicase RuvA n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QZY1_BRAHW Length = 192 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 105/201 (52%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + ++ + GVGYE+ + + ++T + REDA +L Sbjct: 1 MFAFIEGKVQIISEGVIALLCNGVGYEIIVSKKLD---VKNDDNIRLYTKLIHREDAMIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ +F L+ +GVGPKLA+ +LS S ++ + +++ L K+ G+G K Sbjct: 58 YGFLTREEKNMFTTLMSASGVGPKLAMEVLSTYSINDLMHILFNKDINLLKKVSGMGVKK 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+L+ E++D+ + + ++ S ++D E + + AL++LG+ EA + Sbjct: 118 AEKLLFELRDKIEKIDINI-----------SPSVISNDNESDVIKALISLGFSNNEAVKA 166 Query: 181 VSKIARPD-ASSETLIREALR 200 +S I D ++E LI ALR Sbjct: 167 LSAIENKDNMTTEDLISNALR 187 >UniRef50_B1X417 Putative holliday junction DNA helicase RuvA n=1 Tax=Paulinella chromatophora RepID=B1X417_PAUCH Length = 215 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 10/208 (4%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI LRG +++ + L+ GG+GYEV++ + +LP+ + ++ H +VRE Sbjct: 1 MISWLRGELLKSWQQGTYNVALLNCGGIGYEVYLNRRDWEDLPKTREILELYIHMLVREK 60 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 LYGF +R +F+E+I NG+GP+LALA+ + + + + A+ ++ L K GI Sbjct: 61 QWTLYGFIEFDDRDIFREIININGIGPQLALALQTELRGPRLIEAIINGDLVTLTKAHGI 120 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 G++TAERL E++ RF L+ D + L LGY E Sbjct: 121 GRRTAERLSTELRSRFVNLYHTNEVYLKQEGSIQGVLN-DSDLVHDIQNTLKTLGYNKLE 179 Query: 177 ASRMVSKIAR-----PDASSETLIREAL 199 R ++K+ ++ + +REAL Sbjct: 180 IQRAINKLKSKSSLVENSDFDVWLREAL 207 >UniRef50_B5YKF0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RUVA_THEYD Length = 190 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 18/199 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G +I +P ++I+ GG+GY V +P+ +E +FT +V+E++ + Sbjct: 1 MLDFIKGKVITVKPDKIVIQTGGIGYSVKIPIRV-SRYINRDEETQIFTSLIVKEESIEI 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ER LF+ELIK G+GPK+A+ ILS + ++ E++ +L K+PGIGKKT Sbjct: 60 YGFLESSERDLFEELIKIAGIGPKMAINILSTYDRETLYKIIDHEDIKSLSKIPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E++ L + D + ++AL+ LGYK EA + Sbjct: 120 AQRILLELRGILPSLQYE-----------------KDQKYDDILSALLNLGYKRLEAKEV 162 Query: 181 VSKIARPDASSETLIREAL 199 + KI + T+IRE+L Sbjct: 163 LDKIYNNEKDEATIIRESL 181 >UniRef50_C7LZI9 Holliday junction DNA helicase RuvA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZI9_ACIFD Length = 189 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 99/200 (49%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + V+I+V GVGYEVH+ + L E ++ +VR DA L Sbjct: 1 MIGWLHGRVASAGRSPVVIDVAGVGYEVHVTAP-WATLLRRDDECELWIRTIVRADAIAL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ ER F LI +GVGP+LAL IL G+ + A+ E++G L + G+G KT Sbjct: 60 YGFASQAEREAFDALIGVSGVGPQLALGILGGIEGDELWTAIATEDLGRLTAIAGVGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E+ K L P + V AAL LG++P E + Sbjct: 120 AKRVVLELAPTAKRLAPVTGVPMSQEVSA-------------LRAALGELGFRPGEIDAV 166 Query: 181 VSKIARPDASSETLIREALR 200 V + D E +R AL+ Sbjct: 167 VRRCPG-DLDFEAQVRWALK 185 >UniRef50_Q30R94 Holliday junction ATP-dependent DNA helicase ruvA n=19 Tax=Campylobacterales RepID=RUVA_SULDN Length = 188 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 113/201 (56%), Gaps = 17/201 (8%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG+++ K+P V ++VGGV YEV + + F L G E +FT V+REDAQLL Sbjct: 1 MIVGVRGVLVSKEPSFVHVDVGGVVYEVFISLQSFSALS--GNEVKLFTSHVIREDAQLL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF E+ LF+ LIK NGVGPK+A+AI S + QF + +++ A+ ++PGIG K+ Sbjct: 59 YGFLELGEKKLFERLIKINGVGPKVAMAICSTYTPSQFAVVLNNKDITAVQRVPGIGPKS 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE+ D L AS A +A AL +LG+K + S+ Sbjct: 119 AGRILVELSG-------------FDTELIISASEPKSLAVAQASEALESLGFKKDKISKA 165 Query: 181 VSKIARPDASSETLIREALRA 201 + + + L++EAL+ Sbjct: 166 LGSCSA--VDTAILVKEALKL 184 >UniRef50_C2BWM5 Holliday junction DNA helicase motor protein n=3 Tax=Mobiluncus RepID=C2BWM5_9ACTO Length = 194 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 103/200 (51%), Gaps = 13/200 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G ++ K+ + VGG+G E L G A V T+ VVRED+ L Sbjct: 1 MISVIKGEVVSKKLDRATVLVGGLGLEFLATPNTLATLV-PGTTATVQTYLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER F L++ G+GPKL LA LS +S + AV +V AL +PG+GKK+ Sbjct: 60 YGFASPSERDTFATLMQVKGIGPKLGLAALSVLSPEALAAAVANSDVAALQGIPGVGKKS 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+ D+ G+ G + A + V AL LGY A+ Sbjct: 120 AERMILEIGDKLGGVSGVAASTGATAGFNAST----------VVEALSNLGYNQALATEA 169 Query: 181 VSKIARPDASSETLIREALR 200 V+ ++ DA + +REAL+ Sbjct: 170 VNAVSASDAPTA--LREALK 187 >UniRef50_B9KYT2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=RUVA_THERP Length = 191 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 101/201 (50%), Gaps = 16/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI +RG ++ K+ VL++V GV + V T EL E G + TH +VRED L Sbjct: 1 MIRGVRGTLVAKRSGEVLVDVQGVTFRVQTSATTLQELGEPGDLVSLVTHLIVREDELAL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E LF L+ +GVGP+ AL +LS + + + E + L + PGIGKKT Sbjct: 61 YGFATEAELELFLSLLAVSGVGPRGALNLLSLAAPDRLTEWIRGERIEELARAPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+++E++ R L A + +QE VAAL ALGY QEA + Sbjct: 121 ASRIVLELRGRLPAL---------------TEVQAGEPIDQELVAALQALGYTAQEARQA 165 Query: 181 VSKIA-RPDASSETLIREALR 200 + R S E I ALR Sbjct: 166 ATHPEVRRAPSLEERIVAALR 186 >UniRef50_C8NZK0 Holliday junction DNA helicase RuvA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZK0_ERYRH Length = 195 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 16/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G+ +++ V+++ G+GY+V E+ + I T+ VREDA +L Sbjct: 1 MIAFISGVAVDRGIDYVVVDNHGIGYQVFCGNP---EMVTLNESIIFHTYQHVREDAIIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K+E +F++LI GVGPK + ILS S V A+++E++ L KLPG+G K Sbjct: 58 FGFVEKRELDIFRQLITVKGVGPKTGITILSRFSGDDIVRAIDQEDMAFLKKLPGVGPKM 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++++K +F T A EA+ AL LG+K E + + Sbjct: 118 ASQMMLDLKGKFIASDTPSTTKKALP------------LVDEALDALGDLGFKKVELNNI 165 Query: 181 VSKIARPDAS-SETLIREALRA 201 +++ + + +I+E L+ Sbjct: 166 KHELSLLNLDSVDDMIKEGLKL 187 >UniRef50_P73554 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Chroococcales RepID=RUVA_SYNY3 Length = 211 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 16/210 (7%) Query: 1 MIGRLRGIIIEKQPP-----LVLIEVGGVGYEVHMPMTCFYEL-PEAGQEAIVFTHFVVR 54 MI L+G ++ +++ V GVGYE+ +P + + P + VFTH +VR Sbjct: 1 MIQFLQGQVVTVTKNIQNRWFLILSVNGVGYELQVPHSLAQQWTPPPPEPQQVFTHLLVR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 +D L+GF ER LF +L+ G+G +LA+A++ + + V AV V L + P Sbjct: 61 QDQIALFGFGRLAERDLFGQLMGVTGIGAQLAIALIETLGLEGLVQAVVTGNVKQLCQTP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+GKK AERL +E+K + H + ++ T ++ L+ALGY Sbjct: 121 GVGKKGAERLALELKTKLSQWHKLQM-----GTGETDSTLPTTALLEDLEMTLLALGYTQ 175 Query: 175 QEASRMVSKIAR-----PDASSETLIREAL 199 E + ++ +++ E IR+A+ Sbjct: 176 TEIQQAIAMVSQVPDVAQSEDPEVWIRQAI 205 >UniRef50_C0YLR6 Crossover junction endonuclease RuvA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YLR6_9FLAO Length = 194 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 105/204 (51%), Gaps = 12/204 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+GI+ E P +I V GVGY V + + L Q+ +F ++REDA LL Sbjct: 1 MIFSLQGIVQELTPTYAVINVQGVGYYVGISLMTSQTLV-LNQQTFLFIQQIIREDAHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GFN + E+ +F LI NGVG AL +LS +S + +A+ + K GIG KT Sbjct: 60 FGFNTRSEKEMFNLLISVNGVGAVSALILLSTLSLDEIASAILSGNSALIQKAKGIGAKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+IV++KD+ + + + ++E+++AL LG + + ++ Sbjct: 120 AERIIVDLKDKVQKYSDPNANIS---------VMVDNKIKEESLSALEVLGIPKRTSEKI 170 Query: 181 VSKIARPDA--SSETLIREALRAA 202 KI + + S E L+++ L+ Sbjct: 171 ADKIIKQNPSISVEELVKQILKNI 194 >UniRef50_C9MZD4 Holliday junction DNA helicase RuvA n=1 Tax=Leptotrichia hofstadii F0254 RepID=C9MZD4_9FUSO Length = 211 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 7/209 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y+V++ + F +L G + ++ + V+ED L Sbjct: 1 MFEYISGKLTIKKIDYVALDINGLAYKVYVSLKTFEKLDNIGNDEKLYVYTNVKEDDISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI +GVGPKL +AILS + ++ ++ V E ++PG+G K Sbjct: 61 YGFKTQNERELFKALISISGVGPKLGIAILSTFNTREIIDIVNENESKIFTRVPGLGIKK 120 Query: 121 AERLIVEMKDRFKGLHGDL------FTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 A+++I+++KD+ K L + L+ ++ ++P +++ AL +LGY Sbjct: 121 AQKIILDLKDKVKKLDLTETIEEISDISSGKLITSNTSNPKLLLMKEDLKLALESLGYIN 180 Query: 175 QEASRMV-SKIARPDASSETLIREALRAA 202 + S+ + K I+ L+ Sbjct: 181 SDVSKWITDKELAQVKDISEAIKIILQKI 209 >UniRef50_Q1D2J5 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Cystobacterineae RepID=RUVA_MYXXD Length = 202 Score = 179 bits (456), Expect = 3e-44, Method: Composition-based stats. Identities = 83/204 (40%), Positives = 114/204 (55%), Gaps = 10/204 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RLRG ++EK I+VGGVGY V+ +LP GQ V VVREDA L Sbjct: 1 MISRLRGTVLEKDLEDATIDVGGVGYRVNFSSLALGKLPAEGQPVDVRVRTVVREDAFDL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF K E +F L + VGP+L+L +LSGM + V A+ R EV L K+ G+GKKT Sbjct: 61 FGFLTKGEEEVFLLLNSVSRVGPRLSLMVLSGMEVPELVAALSRGEVARLAKIHGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E+KD+ K +H + V A A A + V+AL+ LGYK +A + Sbjct: 121 AERLVLELKDKVKTIHL-------EAVSRGTAPAAVSGAHADLVSALLNLGYKQPQAEKA 173 Query: 181 VS---KIARPDASSETLIREALRA 201 + +A+ + L REAL+A Sbjct: 174 ADLASERLGAEATFQALFREALKA 197 >UniRef50_C1Q8J8 Holliday junction DNA helicase subunit RuvA n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q8J8_9SPIR Length = 194 Score = 179 bits (455), Expect = 4e-44, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 107/201 (53%), Gaps = 13/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + ++ + GVGYE+ + + + ++T + +EDA +L Sbjct: 1 MFAFIEGNVQIISEGVIALVCNGVGYEIIVSKKLE---VKNDDKIRLYTQLIHKEDAMIL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E+ +F LI +GVGPKLA+ ILS S ++ + +++ L K+ G+G K Sbjct: 58 YGFLTREEKKMFSTLIAASGVGPKLAMEILSTYSINDLMHILFNKDINLLKKVQGMGLKK 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+L+ E++D+ + + + ++S + +D E + + AL++LG+ EA + Sbjct: 118 AEKLLFELRDKIEKIDIN---------ISSSSVQNYNDNESDVIKALISLGFSNNEAVKA 168 Query: 181 VSKIARPD-ASSETLIREALR 200 +S I D S+E LI ALR Sbjct: 169 LSSIENKDNMSAEDLISNALR 189 >UniRef50_C7NC64 Holliday junction DNA helicase RuvA n=2 Tax=Fusobacteriaceae RepID=C7NC64_LEPBD Length = 207 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 3/205 (1%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + G + K+ V +++ G+ Y++++ + F ++ ++ H V+ED L Sbjct: 1 MFEYICGKLSVKKIDYVALDINGLAYKIYISLKTFEKMSNIESTEKLYIHTNVKEDNISL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER LFK LI NGVGPKLA+AILS + ++ V+ + E +K+PG+G K Sbjct: 61 YGFKTQNERELFKALISVNGVGPKLAIAILSTFNTKEIVDIILENEPKIFIKVPGLGIKK 120 Query: 121 AERLIVEMKDRFKGLHGDLF--TPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+++I+++KD+ K L + L + +S +++ AL +LGY + S Sbjct: 121 AQKIILDLKDKVKKLEFSEIINENSNTLNGNNISSSEILLMKEDLKLALESLGYADTDVS 180 Query: 179 RMVS-KIARPDASSETLIREALRAA 202 + + + I+ L+ Sbjct: 181 KWIKNDELIKIKNISEAIKIILKRI 205 >UniRef50_B2GIL9 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Kocuria rhizophila DC2201 RepID=RUVA_KOCRD Length = 213 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 13/206 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED-AQL 59 MI + G + L ++EV G G EVH L G + T ++ R+D A L Sbjct: 1 MIASVTGEVAFVGATLAVVEVSGFGIEVHASPRTLSGL-RVGATTRLHTAYIARKDEAPL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+ +F ++ +GVGP+ ALA +S + + A+ + A +PGIG K Sbjct: 60 LFGFAQGDEKEIFTVMLGVSGVGPRTALAAVSVLGPEDARRAIAAGDDKAFTAVPGIGPK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R+++E+ D+ + + P + V AL LG+ ++A R Sbjct: 120 SARRIVLELADKL---------VLPEPPVQQANQPQVPVWRDQVVDALTGLGWSEKDAVR 170 Query: 180 MVSKIARPDASSET--LIREALRAAL 203 + + + E LRA L Sbjct: 171 GIEDALQTQPELGDSGNVAEILRAVL 196 >UniRef50_C5EYK8 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Helicobacter RepID=C5EYK8_9HELI Length = 192 Score = 178 bits (453), Expect = 7e-44, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 15/203 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEA-GQEAIVFTHFVVREDAQL 59 MI L+G I K+P + I+ GV YEV + + ++ + G+ + T ++REDAQ+ Sbjct: 1 MIIALQGEIFFKEPTRIAIKCAGVIYEVFISLQTSNQITQTKGENLTLLTTHIIREDAQI 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+ LF LIK NGVGPK+A+AILS + Q F VE ++ ++ ++PGIG K Sbjct: 61 LFGFLENNEKKLFDTLIKINGVGPKVAMAILSTYTPQTFAKVVESNDIKSMQRVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R++VE+ L + + D + V AL +LGYK + Sbjct: 121 SAGRILVELSGWSLEL------------SQTNQTIKEDSTLHQVVLALESLGYKNDIIQK 168 Query: 180 MVSKIARPDASSETLIREALRAA 202 + + + + +++ AL+ Sbjct: 169 AIKGLEKDE--VGQMVKAALKKI 189 >UniRef50_C3WBK1 Holliday junction DNA helicase ruvA n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBK1_FUSMR Length = 196 Score = 178 bits (453), Expect = 7e-44, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 10/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L+G + K+P + ++V GVGY+V++ + + ++ + G+ ++ ++EDA L Sbjct: 1 MFEYLKGKVEYKKPDYLALDVNGVGYKVNISLRVYDKI-KTGESVRLYIFNYIKEDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++ER LF+ L+ GVG L L+I+S +Q V + L ++P +G+K Sbjct: 60 IGFLEERERNLFEMLLGVKGVGVSLTLSIMSTFDVEQLRKIVAENDYATLKRVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+++I+++K + K + + E AL ALGY +E + + Sbjct: 120 AQQVILDLKGKLKAIGNLFTQDENLFESFAIE--------DELYEALEALGYSQKEINSL 171 Query: 181 VSKIARPD-ASSETLIREALRAA 202 VSK S E I+ L+ Sbjct: 172 VSKEEIRGFTSIEEAIKCVLKKV 194 >UniRef50_A3VP65 Holliday junction DNA helicase RuvA n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VP65_9PROT Length = 202 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 99/201 (49%), Gaps = 5/201 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + +I+V GVGYEV L + GQE + T +V E L Sbjct: 1 MIAALHGTVSVLSGENAIIDVNGVGYEVAATPRLLSSLAQ-GQEVRLITETLVAETYIRL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 F +ER F+ L GVG K ALAILS ++ +AVE + + + G+G K Sbjct: 60 VAFQTIEERLTFRLLQTVQGVGAKAALAILSALTPADLFDAVEAGDKAMVARAQGVGPKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++ E+K + G+ G A+ + ++ A D ++AVAALVALG+ A R Sbjct: 120 ALRIVTELKGKCGGIVGAFPAVAS---PRATSAAAVDSPAEDAVAALVALGFDHGAARRT 176 Query: 181 VSKIARPDAS-SETLIREALR 200 +S + + S +E LI L+ Sbjct: 177 ISTLPDLETSRTEDLITAGLK 197 >UniRef50_Q83GK0 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Tropheryma whipplei RepID=RUVA_TROWT Length = 194 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 16/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G++ +P V++ + G+G+ V +P + PE E ++T VRED+ L Sbjct: 1 MIASLSGLLEAVRPGSVVVNMHGIGFLVRVPQSF---NPEVDAEVKLYTSLQVREDSVSL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E T+F++LI +GVGP++ALAILS ++ + AV + L ++ G+GKK Sbjct: 58 YGFASVLECTVFEQLITISGVGPRVALAILSVLTPAEVAAAVLEGDDKPLQRVSGVGKKL 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +++++ + + L + D E V AL+ LG++ QE++ Sbjct: 118 AGTIVLQLAGKL-----------TSVPLENRKQEQAVDRSAEIVQALIGLGWQRQESAAA 166 Query: 181 VSKIARPD--ASSETLIREALR 200 V + D + ++R ALR Sbjct: 167 VESVLEKDQSLTMPEILRNALR 188 >UniRef50_C6JI67 Holliday junction DNA helicase ruvA n=5 Tax=Fusobacterium RepID=C6JI67_FUSVA Length = 198 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 108/203 (53%), Gaps = 8/203 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M LRG + K+P + ++V GVGY+V++ + + + AG+E ++ + ++EDA L Sbjct: 1 MYEYLRGKVEYKKPDYLALDVNGVGYKVNISLRTYDFI-NAGEEVKLYIYNYIKEDAFKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++ER LF+ L+ G+G LAL+++S + V ++ L ++P +G+K Sbjct: 60 IGFLEERERNLFEMLLGVKGIGVSLALSVMSTFDIDTIRDLVATDDYNNLKRVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 +++LI+++K + K L A + + + E+E ++AL LGY +E + + Sbjct: 120 SQQLILDLKSKLKTLD------ALSIDTRNDDAARHLMIEEELISALEGLGYSKKEINTL 173 Query: 181 V-SKIARPDASSETLIREALRAA 202 + + + + E I+ L+ Sbjct: 174 ITREELKSFKTIEEAIKGVLKKV 196 >UniRef50_C3XJP3 Holliday junction DNA helicase motor protein n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XJP3_9HELI Length = 193 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 14/201 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELP-EAGQEAIVFTHFVVREDAQL 59 MI L G I K+P + ++ GV YEV + + ++ G++ + T ++REDAQ+ Sbjct: 1 MIIALEGEIFLKEPTRLGLKCTGVVYEVFISLQTSQQIQANIGEKLALHTTQIIREDAQM 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 L+GF E+TLF+ LIK NGVGPK+A+AILS + Q F VE ++ ++ ++PGIG K Sbjct: 61 LFGFLELLEKTLFERLIKINGVGPKVAMAILSTYTPQTFAKVVESNDIKSMQRVPGIGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 +A R++VE+ + DLV + D Q+ + AL +LGYK +R Sbjct: 121 SAGRILVELSG-----------WSLDLVQGESLNVKKDSNLQQVILALESLGYKNDVIAR 169 Query: 180 MVSKIARPDASSETLIREALR 200 + + + +++ AL+ Sbjct: 170 VTKGL--ENDEVSAMVKAALK 188 >UniRef50_Q1J0F6 Holliday junction ATP-dependent DNA helicase ruvA n=6 Tax=Deinococci RepID=RUVA_DEIGD Length = 198 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 112/201 (55%), Gaps = 9/201 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G + E + +I GGVGYEV P + L GQ A + VVREDAQLL Sbjct: 1 MIAYLSGAVREVREASAVIVAGGVGYEVFCPASTLGRLV-PGQPAELNIRHVVREDAQLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + LF LI +GVGPKLAL++LS + + +V L + G+GKKT Sbjct: 60 FGFLDTDSLRLFDLLIGVSGVGPKLALSLLSALPVTAVAQGLLSGDVKLLSSVSGVGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AERL++E++++ AA +++ + T A ++A+ AL+ALG++ + + Sbjct: 120 AERLVLELQNKVPE------HLAAGAPVSAGKAALTSTAGRDAIEALLALGFREPQVRSV 173 Query: 181 VSKIA--RPDASSETLIREAL 199 V+++ P+ S++ LIR+ L Sbjct: 174 VAELLAADPEQSADALIRKGL 194 >UniRef50_C9M7E3 Holliday junction DNA helicase RuvA n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M7E3_9BACT Length = 200 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ LRG +I + ++E GG+G++V + F L G+ + T+ V + L Sbjct: 1 MLASLRGTVILLEGSSAVVECGGLGFQVQLTRKAFG-LCRVGESVFLQTYLQVSDAGMSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + ER F+ L GVG KLA+ +L +SAQ+ + AV + L +PGIGKKT Sbjct: 60 FGFADAAERQAFELLTTVKGVGGKLAMTVLQSLSAQETIAAVAAGDSKTLTAVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E+ ++ +S A E + AL +LG+ + R Sbjct: 120 AERICFELSEKI----------TGSSEWSSADLTAKLQHSDEVIEALESLGFDHASSVRA 169 Query: 181 VSKIARPD---ASSETLIREALRA 201 ++ + AS+E I LR Sbjct: 170 YQQLCQERGEPASTEEAIFNCLRL 193 >UniRef50_Q8REJ7 Holliday junction ATP-dependent DNA helicase ruvA n=10 Tax=Fusobacterium RepID=RUVA_FUSNN Length = 194 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M L G + K+ + I++ GVGY V+ P+ + ++ E G + ++ + ++ED L Sbjct: 1 MFEYLYGTVEYKKMDYIAIDINGVGYRVYFPLREYEKI-EVGNKYKLYIYNHIKEDTYKL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++++R +F+ L+K NG+G LALA+LS S + + + + + L ++P +G+K Sbjct: 60 IGFLDERDRKIFELLLKINGIGSSLALAVLSNFSYNKIIEIISKNDYTTLRQVPKLGEKK 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+ +I+++K + K L + D ++ V AL LGY +E + Sbjct: 120 AQIIILDLKGKLKNLTYTE------------EETVSMDMLEDLVLALEGLGYNKKEIDKT 167 Query: 181 VSKI-ARPDASSETLIREALRAA 202 + KI +S E I+ L+ Sbjct: 168 LEKIDLNKFSSLEDAIKGILKNM 190 >UniRef50_A9B9X1 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=RUVA_PROM4 Length = 223 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 21/219 (9%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G I+ ++ GVGYE+ + L ++ H V++ED Sbjct: 1 MIGWLKGEKIDHWNNGNRAGFVLSCNGVGYEIQLSRRNLIALNNYN-VLSIWIHQVLKED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF K ER LF++LI +GVGP+LA+++L S +Q + V+ +EV L + G+ Sbjct: 60 GSNLFGFIEKSERDLFRKLITVSGVGPQLAMSLLDDNSYEQLIANVQNKEVTKLTRSSGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERLI+E++++ + + A ++ E +AL L Y E Sbjct: 120 GKRTAERLILELQNKLSDFDLNNEFSPPTKLRPESAEDLNEELLTEIKSALRNLDYSDFE 179 Query: 177 ASRMVS----------------KIARPDASSETLIREAL 199 V+ K+ + E L ++AL Sbjct: 180 ILEAVNTVTSNYLDDAASANERKLLLKSLNFEKLFKQAL 218 >UniRef50_UPI00016C0EB8 Holliday junction DNA helicase RuvA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0EB8 Length = 183 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 102/199 (51%), Gaps = 20/199 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG L G + E+ ++L+EV G+GYE+ M E ++ + ++EDA L Sbjct: 1 MIGYLVGTVAERFENIILLEVNGIGYEIFMXGKIDVA------EVKIYIYENIKEDAYDL 54 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + E+ LFK+LI NG+GPK A A++ V + E+ + ++PGIG K Sbjct: 55 YGFVSLAEKELFKKLISVNGIGPKAAAALIVLHGIN-LVECIVNEDASEITRVPGIGAKI 113 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RLI+E+KD+ D +EA AALVALGY ++A+R Sbjct: 114 ASRLILELKDKLSAFKTLEKRVVVDG-------------LEEATAALVALGYNKKQAARA 160 Query: 181 VSKIARPDASSETLIREAL 199 V+ + S E I++AL Sbjct: 161 VNAVYNYSDSIEDTIKKAL 179 >UniRef50_D2MP66 Holliday junction DNA helicase RuvA n=1 Tax=Bulleidia extructa W1219 RepID=D2MP66_9FIRM Length = 192 Score = 175 bits (445), Expect = 6e-43, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 103/201 (51%), Gaps = 15/201 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G+I E ++I G+G+ V+ P + G+E VFTH V E+ L Sbjct: 1 MIAFIQGVITEIGDDYIVINHQGLGWLVYYPHSLE---VHVGEELQVFTHMSVSENDMRL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ +E+TLF LI G+GPK A+ +L A+ + +V AL KLPGIG K+ Sbjct: 58 YGFSSSKEKTLFLNLISVKGLGPKTAMTMLQKSGYALITEAISKGDVAALKKLPGIGAKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A +++++++ + + ++S QEA+ AL GYK + + + Sbjct: 118 ASQIVLDLQGKLVAVE-----------VSSTKMMNYPLEIQEALEALKNFGYKGGDLNVV 166 Query: 181 VSK-IARPDASSETLIREALR 200 +K + +P +E IR L+ Sbjct: 167 GNKMLEQPSMKTEEYIRFGLK 187 >UniRef50_C9R8U6 Holliday junction DNA helicase RuvA n=1 Tax=Ammonifex degensii KC4 RepID=C9R8U6_AMMDK Length = 193 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 72/200 (36%), Positives = 113/200 (56%), Gaps = 20/200 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ LRG ++EK+ +I VGG+G EV +P++ + LP G E ++T ++RED + Sbjct: 1 MLAFLRGSVLEKERGRAVILVGGMGLEVFLPLSLYERLPAKGGEVELYTCLLLREDRPEI 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ER F L+K GVGPK ALA+LS S ++ A+ E++ L +PG+GKKT Sbjct: 61 YGFGDREERDFFLRLLKIGGVGPKTALALLSCFSVEELREAIRSEDLEKLTVVPGVGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A RL++E+K+ +P +A +AVAAL+ LGY+ +EA Sbjct: 121 ARRLLLELKE-------------------EKGAPVEGEAAADAVAALINLGYRRREAEEA 161 Query: 181 VSKIARPDA-SSETLIREAL 199 V + A E L++ +L Sbjct: 162 VREAKARGAQGIEELLKLSL 181 >UniRef50_D1AXU1 Holliday junction DNA helicase RuvA n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AXU1_STRM9 Length = 200 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 7/199 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GI+ K V+I++ GVGY+++ + + +L G++ ++ H +V+ED Sbjct: 1 MYEYFEGILSVKNLNYVVIDINGVGYKIYTSIKTYDKLNSIGEKERLYIHTIVKEDDISF 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF N+ ER++F E I NG+G K A+AILS ++ + L K+PGIG K Sbjct: 61 FGFKNELERSIFLECIAINGIGAKKAIAILSNFEFEELAAIASSKNFKELAKVPGIGMKK 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AE+++V++ D+ +GL + + D+V + ++ AL +LGY+ + + Sbjct: 121 AEKIMVDLSDKLEGLKITNSSSSQDIV-------ELYNKKENLRLALESLGYEKVNINNI 173 Query: 181 VSKIARPDASSETLIREAL 199 + + + + LI+ AL Sbjct: 174 IEDKYIKELNMQELIKMAL 192 >UniRef50_A7VWM3 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWM3_9CLOT Length = 168 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 64/171 (37%), Positives = 90/171 (52%), Gaps = 7/171 (4%) Query: 32 MTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILS 91 M LP G+EA+++TH VREDA L+GF++ E FK L +GVGPK+ LAILS Sbjct: 1 MNTQRSLPAIGKEAVLYTHMNVREDAVDLFGFSSLAELNCFKLLTSVSGVGPKVGLAILS 60 Query: 92 GMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSP 151 +S +Q AV + L G+G K A+R+I+E+KD+ K L G + V + Sbjct: 61 VLSPEQVAVAVAAGDFKTLTMAQGVGNKLAQRVILELKDKLKALGG------GEEVTAAA 114 Query: 152 ASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAA 202 EA+ AL LGY P + + +V+K E LIR L+A Sbjct: 115 GVVNAAGNAAEAMNALTVLGYTPSDVAPVVAKF-DSSLPVEELIRLTLKAM 164 >UniRef50_B9L9P0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Nautilia profundicola AmH RepID=RUVA_NAUPA Length = 184 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 23/201 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG I EK +L++V V YE+++ M F + + G + + +++E+ L Sbjct: 1 MIAALRGNIFEKDGGKILLDVNNVIYELNVSMITFSSVNDKG---LFYITEIIKENEYTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +K E+ LF LIK NGVGPK+ALAI S + Q F++ + ++ AL K+PGIG K+ Sbjct: 58 YGFADKNEKKLFDSLIKLNGVGPKVALAICSTYTPQTFMDIIANHDINALKKIPGIGPKS 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++EM + +A++AL +LG+ + + Sbjct: 118 AKRILMEM------------------GEFEVVFEEQNPVFNQALSALESLGFNKNDIVKA 159 Query: 181 VSKIARPDASSETLIREALRA 201 ++ I + E I+ AL+ Sbjct: 160 LNGIKSDNL--EETIKLALKK 178 >UniRef50_A5IKQ6 Holliday junction ATP-dependent DNA helicase ruvA n=9 Tax=Thermotoga RepID=RUVA_THEP1 Length = 188 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 105/201 (52%), Gaps = 19/201 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + G +++K ++L+E GV +E+ + E+ E G E + T V +D Sbjct: 1 MIAGISGRVLKKSGNVLLVETKSGVVFEIVCDVQTSEEV-EEGGECFLHTFLSVSQDGIT 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF+N++++ LF L K + +GPK AL I+S A+ V + ++V L KLPGI KK Sbjct: 60 LYGFSNERKKELFLSLTKVSRLGPKTALKIISNEDAETLVTMIASQDVEGLSKLPGISKK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TAER+++E+KD F A E++ AL++LGY ++A Sbjct: 120 TAERIVMELKDEF-----------------ESAGIKDMRIYHESLEALISLGYPEKQARE 162 Query: 180 MVSKIARPDASSETLIREALR 200 V + R + LI+EAL+ Sbjct: 163 AVKHVYREGMKTSELIKEALK 183 >UniRef50_A6Q8H2 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Epsilonproteobacteria RepID=RUVA_SULNB Length = 185 Score = 173 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 20/201 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI+ + P + + V G+ YE+ + + + E + +F V+REDA LL Sbjct: 1 MIVGMEGIVERRDPTFIHLNVNGIIYEIQVSINTSNAIQE--KRVKLFITQVIREDADLL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F ++K NGVGPK+ LAI S + + F V ++V L ++PGIG K Sbjct: 59 FGFMDTNEKKMFDTVLKINGVGPKVGLAICSTFTPETFAKVVASKDVSMLKRVPGIGPKA 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R++VE+ D ++ A+ + A EAV AL +LG+K + Sbjct: 119 ASRILVELAD---------------FIVDGNAAEGSSGALGEAVMALESLGFKKDAIQKA 163 Query: 181 VSKIARPDASSETLIREALRA 201 +S + + TL++E L+ Sbjct: 164 LSGCSG---DTSTLVKEGLKK 181 >UniRef50_B2S3D5 Holliday junction ATP-dependent DNA helicase ruvA n=4 Tax=Treponema RepID=RUVA_TREPS Length = 227 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 4/187 (2%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M + GI+ + + +EV G+ +E+ + E G VFT REDA L Sbjct: 1 MFESISGILTLHERERLCVEVHGIEWEIAVSAYSSAAFGEVGSHVKVFTWLYHREDALRL 60 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF+N QERTLF L K G+GPK AL +LS +S+Q A++ ++ AL ++PGIGKKT Sbjct: 61 FGFSNVQERTLFLSLTKVEGIGPKQALKVLSSISSQALCAALDTGDLCALQRIPGIGKKT 120 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASP----ATDDAEQEAVAALVALGYKPQE 176 A+R+++ +K + + S ++ V ALV +GY + Sbjct: 121 AQRMLLALKGTLALTDAASCAQSQTDDRAAHPSNLGCAPHAREIEDLVTALVQMGYDRKM 180 Query: 177 ASRMVSK 183 A+ ++++ Sbjct: 181 AAEVIAQ 187 >UniRef50_A5CS07 Holliday junction ATP-dependent DNA helicase ruvA n=3 Tax=Microbacteriaceae RepID=RUVA_CLAM3 Length = 214 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 11/178 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ +L+EV GVGY V + EL G EA V T VVRED+ L Sbjct: 1 MISSLRGTVLSVSGQTLLLEVHGVGYGVSVTPRHALEL-RNGSEATVLTSLVVREDSLTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF E F+ L GVGPK ALA+L + + AV E+ A ++ GIG KT Sbjct: 60 FGFPGPDELRAFELLCGVTGVGPKSALAVLEHLDPEAMAQAVAAEDDAAFRRVSGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 A+ +++++ + + A+ A + V AL+ LG+ + A Sbjct: 120 AKLIVLQLAGKLFVTQPRARS----------ATSAASTVTADVVTALIGLGWSERVAR 167 >UniRef50_A5KTE9 Holliday junction DNA helicase RuvA n=2 Tax=candidate division TM7 RepID=A5KTE9_9BACT Length = 187 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 15/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G + EK ++I+V GVGYEV + + EL +E ++T+ VRE + L Sbjct: 1 MIAHVVGRLTEKFIDSIIIDVNGVGYEVLVTALEYEEL-ALQEEVKLYTYHHVREQVEEL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + LF+ LI G+GPK ALAILS + +A+ + G + + G+GK+T Sbjct: 60 YGFSSLAGKRLFELLITVQGIGPKAALAILSLGDPEVVRSAIASSDSGFIQRASGVGKRT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R++V++ D+ TP + + Y ++A+ + Sbjct: 120 ADRVVVDLADKVGLPSQAGHTPKQAGGDDALDALLALG-------------YNVRQATEV 166 Query: 181 VSKIARPDASSETLIREALRAA 202 ++++ + E +R+AL+ Sbjct: 167 LAEL-DTTLTVEEKVRQALKRM 187 >UniRef50_Q2RHT6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RUVA_MOOTA Length = 202 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 101/203 (49%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MIG LRG + P +L+E GG+G+ V P G E V+T VVREDA L Sbjct: 1 MIGYLRGRLHLVTPEGILLETGGIGWLVRT--VTNRSWPAPGTEIAVYTQLVVREDAMEL 58 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +E LF L NG+GP+ AL IL +Q A+ + L LPGIG K Sbjct: 59 YGFTRPEELHLFTLLRGVNGIGPRGALQILGAAKPEQLSRAIAAGDSAFLTALPGIGAKK 118 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+RL++E+KD + A PA EA+AAL+ALGY +E + Sbjct: 119 AQRLLLELKDAVLK-------SGLVDGTETEAIPAGGGDNDEALAALLALGYSREEIGPI 171 Query: 181 VSKIARP---DASSETLIREALR 200 ++++ + A + +++ L+ Sbjct: 172 LARVRQELGNAAPTTAVLQAVLK 194 >UniRef50_C1XYW5 Holliday junction DNA helicase subunit RuvA n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XYW5_9DEIN Length = 193 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ L+G + K V++ VGG G EV P T LPE G E + T VVRED L Sbjct: 1 MVRYLKGTALRKTENSVILLVGGFGLEVFCPTTTLTHLPEEG-EIALHTKLVVREDDLSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +++ LF+ L+ +GVGPK+ L +LS +S A+ ++ L G+G+K Sbjct: 60 YGFADQRSLELFEMLLGVSGVGPKVGLNLLSSLSPALLARALADGDIRLLTGAQGVGRKL 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ +E++ + P T +EA ALV LG++ + Sbjct: 120 AERIALELRGKVPPHLMGEAGPILRRPQT-----------EEAELALVTLGFRENQVRSA 168 Query: 181 VSKI--ARPDASSETLIREALRA 201 V++I P+AS++ +IR AL+A Sbjct: 169 VAQIVQQNPEASTQEIIRLALKA 191 >UniRef50_UPI000038462D COG0632: Holliday junction resolvasome, DNA-binding subunit n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI000038462D Length = 173 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 61/164 (37%), Positives = 87/164 (53%), Gaps = 3/164 (1%) Query: 40 EAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFV 99 E G A +F VREDA L+GF + ER F+ L GVG K+ LAILS + Q + Sbjct: 2 EVGSAATLFIETQVREDAISLFGFLDTGERDWFRLLTTVQGVGAKVGLAILSVAAPDQLL 61 Query: 100 NAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDA 159 + ++ L + G+G K A R++ E+KD+ + F P A V +S PA Sbjct: 62 QIIAAQDKAGLTRANGVGPKLAVRILTELKDKAGKIALGGFNPTAGAVASSAPLPAASGR 121 Query: 160 EQEAVAALVALGYKPQEASRMV---SKIARPDASSETLIREALR 200 ++AV+ALV LGYK EA + V ++ DA S LIR +L+ Sbjct: 122 MEDAVSALVNLGYKRLEAFQAVGETARELGDDADSSALIRASLK 165 >UniRef50_C7TAK4 Holliday junction DNA helicase RuvA n=9 Tax=Lactobacillus RepID=C7TAK4_LACRG Length = 198 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 10/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G I P ++I+V G+G+ + + + EAG++ ++ ++RE+ Q L Sbjct: 1 MYEYFEGTIQAVTPAYIVIDVNGIGFRLLVANPYDF---EAGKQTRIYVQLIIRENDQTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ F +L+ G+GPK ALAIL+ +S+ A+ +++V L K PGIGKKT Sbjct: 58 YGFETAADKRTFNQLLSVTGIGPKSALAILANVSSGGLATAIAQDDVKFLTKFPGIGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+++K + A A A+ GY + + Sbjct: 118 AAQIILDLKGKITTDAQPAAATIMPTADQVAPELADALAALVAL------GYTQRAVDGI 171 Query: 181 VSKIARPDA-SSETLIREALRA 201 + DA +++ +RE LR Sbjct: 172 TDALKAFDATTTDAYLREGLRL 193 >UniRef50_A8UZA0 Holliday junction resolvasome DNA-binding subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZA0_9AQUI Length = 180 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 26/201 (12%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI ++G +IE ++IE G G ++ P ++ ++T+ ++++ L Sbjct: 1 MIDYIKGKVIEVLNDFIVIETGNFGIKIETPHKF------EKKDTKIYTYLTFKDESFRL 54 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF ++Q R LF +L NG+G K A +IL + + F AVE + L +PGIGKKT Sbjct: 55 FGFKDRQTRELFIKLTSINGIGVKHAFSILKNFNYEDFTLAVENNRIDLLSSVPGIGKKT 114 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A R+I+E+K + +AV ALV+LG++ ++ ++ Sbjct: 115 ASRIILELKGKLSFSEEP--------------------IFNDAVEALVSLGFEKEKVIKI 154 Query: 181 VSKIARPDASSETLIREALRA 201 V ++++ S E LI+ +L+ Sbjct: 155 VKELSQKTNSLEELIKLSLQK 175 >UniRef50_C0VVS8 Holliday junction DNA helicase motor protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VVS8_9CORY Length = 200 Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 10/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L G ++ K +IE GGVGYE ELP G++ V T V+ E L Sbjct: 1 MIASLHGEVVAKSLTGGVIECGGVGYEFLATAATLAELP-LGEDGRVLTTMVIGEKVVTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ERT+F +L G+GPKLALA L+ S + AV ++ L +PG+G + Sbjct: 60 YGFAHDSERTMFSQLQGVQGLGPKLALACLNTYSPSEIAVAVANDDKKTLQAIPGVGARM 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++ + + TS A+ + VAALV LG+ A+ Sbjct: 120 AAKMTAVLDGKLDEFI-------DSTATTSSAAEPVTGGSETVVAALVQLGFDEDSANHA 172 Query: 181 VSKIARPDA--SSETLIREALR 200 + + + T +R AL+ Sbjct: 173 AAWAEESNPGGDTGTNLRHALQ 194 >UniRef50_A6LLH1 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Thermosipho RepID=RUVA_THEM4 Length = 189 Score = 168 bits (427), Expect = 8e-41, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 15/200 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G++ + + + + V + YE+ + T ++E ++ VFT +V +D L Sbjct: 1 MIYAMYGVLEDIENGKLYLNVNEIVYEIVVGDTGYFEDF-LNEKIKVFTKMIVNDDEISL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++ + LF++LI N +GPK AL I++ V+A+ E+V L LPGIG KT Sbjct: 60 YGFSDVLKLKLFEKLILVNKLGPKSALKIITSSDVSYIVSAIVNEDVKTLSTLPGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I+E+KD K L D EA+ ALV LG+ ++ + Sbjct: 120 AERIILELKDSMKEFDVTLTE--------------KDKKILEAIEALVTLGFSRNQSKKA 165 Query: 181 VSKIARPDASSETLIREALR 200 V++I + D S + +I++AL+ Sbjct: 166 VTQILKKDDSLDDIIKKALK 185 >UniRef50_Q7U7F0 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Synechococcus sp. WH 8102 RepID=RUVA_SYNPX Length = 205 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%) Query: 1 MIGRLRGIIIEKQP----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MIG L+G + + LVLI GGVGY+V + + + Q + H VV D Sbjct: 1 MIGWLKGDVQHRDQKGSRNLVLIACGGVGYDVQLIERDWQAV-STDQRHEFWIHQVVSAD 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L+GF ER LF+ELI+ +GVGP+ LA+L+ + ++ V A+ ++ L + G+ Sbjct: 60 NLQLFGFLQLAERDLFRELIQVSGVGPQAGLALLNACAYKELVTALVHSDLKTLCRAKGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GK+TAERL +E++ R + T P D + +A L LG++ E Sbjct: 120 GKRTAERLALELRTRL----------TDSVASTGPERNQLDPVAPDLIATLETLGFETHE 169 Query: 177 ASRMVSKI-----ARPDASSETLIREALRAA 202 + ++ + + +R ++ Sbjct: 170 IRDALQRLNGMGGPQDGDDDDAWLRACIKLM 200 >UniRef50_B8H455 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Alphaproteobacteria RepID=RUVA_CAUCN Length = 205 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 7/204 (3%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDA-QL 59 MIGRLRG + E LI+V GVGY V LP G+E ++ E A Sbjct: 1 MIGRLRGAVAEVGEEEALIDVMGVGYLVRCGHRTLQRLPALGEETLLHIESQWSESAGLR 60 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF +++R F L GVGPK A+A+L +S + +AV RE+ A+ + G+G K Sbjct: 61 LYGFLTREDRRAFVLLQAIQGVGPKAAMAVLDVLSPAELASAVAREDKAAVGRANGVGPK 120 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP---QE 176 A R++ E+KD+ D + ++P++PA +AVAAL+ LG + Sbjct: 121 LALRIVTELKDK---PITDGPVLMSAPTSSAPSAPAKPAPTGDAVAALMGLGVAEVNARR 177 Query: 177 ASRMVSKIARPDASSETLIREALR 200 + +A+ + LI+ L+ Sbjct: 178 VVEAAAAELGEEATVQALIKAGLK 201 >UniRef50_A0RP49 Holliday junction ATP-dependent DNA helicase ruvA n=24 Tax=Campylobacter RepID=RUVA_CAMFF Length = 184 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 21/202 (10%) Query: 1 MIGRLRGIIIEKQPPLVLIEV-GGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQL 59 MI + GII +K+P V I+ GV Y + + + L + G++ +F V+REDA L Sbjct: 1 MIKAIEGIITKKEPTNVWIKTLSGVSYGISISLFTSASL-QKGEKVELFITQVIREDANL 59 Query: 60 LYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKK 119 LYGF + E+ +F+ L+K NG+G A+A+ S + +F AV + L ++PGIG K Sbjct: 60 LYGFIKESEQRIFEMLLKVNGIGASTAMAVCSSLGPDEFSIAVMNGDDAVLRRVPGIGPK 119 Query: 120 TAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASR 179 TA LI ++ D + + EA AL +LG+K S+ Sbjct: 120 TARTLIAQLSD-----------------AKFGEINSMPSYQNEAFMALESLGFKRDRISK 162 Query: 180 MVSKIARPDASSETLIREALRA 201 ++++ + D + +LI+EAL+ Sbjct: 163 VLNECSSND--TASLIKEALKK 182 >UniRef50_A6DCG6 Holliday junction DNA helicase motor protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DCG6_9PROT Length = 180 Score = 165 bits (419), Expect = 6e-40, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 27/200 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I EK + ++V + YE+++ + F ++ I + +++E+ L Sbjct: 1 MIAALKGKIFEKDNGKIFLDVRDIIYELNVSLNTFAN----AKDGIFYITEIIKENEYSL 56 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF NK E+ LF LIK NGVGPK+ALAI S + +F++ + +++ +L K+PGIG K+ Sbjct: 57 YGFINKNEKKLFDNLIKLNGVGPKVALAICSTFTPDEFISIISSQDINSLKKVPGIGPKS 116 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++EM D + +AV AL LG+K + + Sbjct: 117 AKRILMEMGD--------------------FEIENINPIISQAVTALENLGFKRADILKA 156 Query: 181 VSKIARPDASSETLIREALR 200 +S + D S E +I+EAL+ Sbjct: 157 ISGL---DGSLEDIIKEALK 173 >UniRef50_D1Y1N8 Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y1N8_9BACT Length = 203 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 9/203 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ +RG ++E+ ++E G G EV + E G + ++T V + +L Sbjct: 1 MLASIRGKVVERSEFTAVVECNGFGVEVLLTRRAAERC-ELGTQVFLYTLLQVGDAGIVL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + ER FK +I T GVG K A++IL +S + V AVE+ ++ L +PGIGKKT Sbjct: 60 YGFADDTERRTFKLMILTKGVGGKAAISILQYLSPAEIVAAVEQNDIRLLTSVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E+ DR T A + AL +LG+ A R Sbjct: 120 AERICFELSDRIHKKGFIQLTGEFHGAPAGDRQAAAS-----VLDALESLGFDRASAVRA 174 Query: 181 VSKIARPDASS---ETLIREALR 200 + + I LR Sbjct: 175 YKSVVAEQGEALGESETIMSCLR 197 >UniRef50_A4XJS2 Holliday junction ATP-dependent DNA helicase ruvA n=2 Tax=Clostridia RepID=RUVA_CALS8 Length = 197 Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 12/203 (5%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + G I E V++ + ++ T F E G+E V+ E+ L Sbjct: 1 MIDSIVGTIQEVFNNYVILNYNNIYIKIFCNSTKFSEF--LGKEKRVYVSLKFNENLSEL 58 Query: 61 --YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 YGF ++ER LF +L K GVG KLAL ILS + QQ + + + V L K+ GIGK Sbjct: 59 ECYGFLTREERELFLKLQKVTGVGSKLALQILSSIDYQQLIVEIAKGNVARLEKVKGIGK 118 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 KTA R+I+E+K+ K + TS T + +E AL++LGY+ E + Sbjct: 119 KTASRIILELKETLKK--------EFKVASTSGTEEKTYEKLEEISLALLSLGYEIDEIN 170 Query: 179 RMVSKIARPDASSETLIREALRA 201 +++S + S E I+ AL+ Sbjct: 171 QVLSSEDFSELSLEDGIKLALKK 193 >UniRef50_A6GER9 Holliday junction DNA helicase motor protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GER9_9DELT Length = 206 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 8/194 (4%) Query: 17 VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELI 76 V+++V GVGYE+ + + +P G E ++ H VREDA L+GF +ER LF+ L Sbjct: 11 VILDVKGVGYELFVSIQTLAGVPAEGDEVELWVHTNVREDAITLFGFAEAEERLLFRMLT 70 Query: 77 KTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLH 136 VGP+ A+A+L G A + + + ++ LVK+PGIGKKT+E++++ + D+ L Sbjct: 71 SVPKVGPRNAVAVLGGFPAIELLETIAAKDSAKLVKIPGIGKKTSEQIVLTLGDKVVTLL 130 Query: 137 GDLFTPAADLVLTSPA--SPATDDAEQEAVAALVALGYKPQEASRMVSKIARP-----DA 189 L T D EA L++LG+K + + + + + Sbjct: 131 ELLRAQRGGEPGTQAELLPAEAPDFGTEAREVLLSLGWKGRAVEKALVAVEAELAEGANV 190 Query: 190 SSETLIREAL-RAA 202 + L+R L + Sbjct: 191 QLDALVRMTLAKLM 204 >UniRef50_C1TMQ3 Holliday junction DNA helicase, RuvA subunit n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMQ3_9BACT Length = 202 Score = 164 bits (415), Expect = 2e-39, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 14/205 (6%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ + G +++ + +++V G+G+E+ + L G+E + H + L Sbjct: 1 MLAMVTGTVLDVTTQMAVVDVSGLGFEMQLTRK-ASSLCSVGKEVSLHCHVQFSDAGPTL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 +GF + E+ +F L+ G+G KLAL +L GM+A+ V AV + L +PGIGKKT Sbjct: 60 FGFADGLEKAVFLRLLSVRGIGGKLALQVLQGMTAEAVVQAVSFGDPSGLTGVPGIGKKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+ E++++ T + + AL +LG++ Q +S Sbjct: 120 AERICFELQEKMSE--------GLPKGSTDNLREMVVPDSETVMEALESLGFQRQSSSEA 171 Query: 181 VSKIARP-----DASSETLIREALR 200 ++ IA+ E LI ALR Sbjct: 172 LAAIAKKRGSVDGLGVEDLIMLALR 196 >UniRef50_C1DXL3 Holliday junction DNA helicase RuvA n=3 Tax=Sulfurihydrogenibium RepID=C1DXL3_SULAA Length = 181 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 108/199 (54%), Gaps = 25/199 (12%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ ++G I++ +++E G G ++++P + + E V+T V+E+ + Sbjct: 1 MLEFIKGKIVKVDKNKIIVEKDGFGIKINVPDS-----EKFSDEDTVYTILKVKEEEIRV 55 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 GF ++E+ LF +L + +GVG K ALAIL S +F++ +++ +V +L K+ GIGKKT Sbjct: 56 IGFKTQEEKELFNKLTQIHGVGEKHALAILGHFSIDEFIDILDQSDVDSLTKVQGIGKKT 115 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+IVE+K + + + Q+ V L LG+ +++ ++ Sbjct: 116 AQRIIVELKGKVDF--------------------SENSLIQDFVKTLTNLGFDKEQSYKV 155 Query: 181 VSKIARPDASSETLIREAL 199 V K+ + D + E ++++A+ Sbjct: 156 VRKLLKEDNNVENILKKAI 174 >UniRef50_Q7VCI6 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Prochlorococcus marinus RepID=RUVA_PROMA Length = 222 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 9/195 (4%) Query: 1 MIGRLRGIIIEKQPPL----VLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRED 56 MI L G+ IE VLI GVGYEV + +E I++ H V RED Sbjct: 1 MISWLNGLKIEIWENGTRKGVLISCSGVGYEVQLLSRSLQL-LNTSKELILWVHEVHRED 59 Query: 57 AQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGI 116 L GF NK ER LF++LI +GVGP+LA+++L A+Q ++A+ ++++ L PG+ Sbjct: 60 GSQLIGFLNKLERDLFRKLISVSGVGPQLAISLLEKNPAEQLISAITKKKIAQLTSCPGV 119 Query: 117 GKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQE 176 GKKTAERL++E++++ L G + + + E + L+ L YK E Sbjct: 120 GKKTAERLVIELQNKLSDLIGSSLKKTNNHLELEYETN----VADEVRSTLLNLDYKNSE 175 Query: 177 ASRMVSKIARPDASS 191 + + S Sbjct: 176 IEKAFLEFETSSKSI 190 >UniRef50_UPI0001C338F3 Holliday junction DNA helicase, RuvA subunit n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C338F3 Length = 213 Score = 163 bits (412), Expect = 5e-39, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 16/210 (7%) Query: 1 MIGRLRGIIIEKQPPL-----VLIEVGGVGYEVHMPMTCFYELPEAGQE-AIVFTHFVVR 54 MI +G +E +++EV +GYE+ + +L + VF H R Sbjct: 1 MINYFKGSFVEILKDTKNKIVLIMEVNQIGYEIQITSKLEEKLSNKKSDYIQVFIHLQTR 60 Query: 55 EDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLP 114 ED+Q+LYGF NK E+ LF++LI NG+G +L++ +L+ + +++ + AV V L + P Sbjct: 61 EDSQILYGFINKLEQELFRQLININGIGAQLSITLLNTLGSEKLIKAVCSGNVKMLSESP 120 Query: 115 GIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKP 174 G+GKKTAER+I+E+ + L A ++ + + ++++ ++ ++L+ LGY Sbjct: 121 GVGKKTAERIILELNSKLLKL-----IEAFEIKVELHSCNSSENTLEDITSSLLLLGYDR 175 Query: 175 QEASRMV-----SKIARPDASSETLIREAL 199 + R+ ++ ++E L+R A+ Sbjct: 176 EGVDRVTVYLKNNQFLSKQINTEELLRTAI 205 >UniRef50_A8F8Q5 RuvA domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F8Q5_THELT Length = 186 Score = 162 bits (410), Expect = 8e-39, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 18/196 (9%) Query: 5 LRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFN 64 ++G + K V++E+ G ++ + + + GQ + TH ++ +YGF Sbjct: 3 VKGTVHSKNGSSVILEINGFLIKILCDIETLEK-AQIGQTVQLHTHLEFSQEGITIYGFL 61 Query: 65 NKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERL 124 +K+ +F++++K + +GPK AL I+S ++ V+ + ++V L + PGIGKKTAERL Sbjct: 62 SKERLYVFEKILKVSKIGPKTALRIVSTSEPEELVHLIISQDVEKLSRFPGIGKKTAERL 121 Query: 125 IVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKI 184 I E+KD +A+ ALVALG+ E+ + Sbjct: 122 IAELKD-----------------EEFEIKSDYSKELSDAIDALVALGFGKIESREAAKSV 164 Query: 185 ARPDASSETLIREALR 200 +E +++EAL+ Sbjct: 165 YHSSKKAEQIVKEALK 180 >UniRef50_B0PAT7 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAT7_9FIRM Length = 172 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 29 HMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALA 88 +T LP G EA ++TH VREDA LYGF + E FK LI +GVGPK ALA Sbjct: 1 MTTLTTLSCLPPVGGEATLYTHLNVREDALDLYGFYTQAELNAFKMLIGVSGVGPKSALA 60 Query: 89 ILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVL 148 ILS M+ + + + +L PGIG K A+R+I+E KDR L Sbjct: 61 ILSDMTPDKLALCIAAGDSKSLRAAPGIGPKAAQRIILECKDRIGASELSGEMSEVASQL 120 Query: 149 TSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRA 201 + ++ A A GY P E + D E +I+ L+A Sbjct: 121 RHETTNMSEAASALAAL-----GYSPTE-AAQALAGLAADMPVEDMIKHGLKA 167 >UniRef50_Q03B18 Holliday junction ATP-dependent DNA helicase ruvA n=26 Tax=Lactobacillales RepID=RUVA_LACC3 Length = 198 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 10/202 (4%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M GII P ++I+V G+G+ + + + EAG++ V+ ++R++ Q L Sbjct: 1 MYEYFEGIIQAVTPAYIVIDVHGIGFRLLVANPYHF---EAGEQKRVYVQLIIRDNDQTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ F +L+ G+GPK ALAIL+ +S+ A+ +++V L K PGIGKKT Sbjct: 58 YGFEGAADKRTFNQLLTVTGIGPKSALAILANVSSGGLATAIAQDDVKFLTKFPGIGKKT 117 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++I+++K + A + + A A A+ GY + + Sbjct: 118 AAQIILDLKGKITTDGQPAAAAIAPVASDVDSELADALAALVAL------GYPQRTVDGL 171 Query: 181 VSKIARPDA-SSETLIREALRA 201 + A +++ +RE LR Sbjct: 172 TDTLKAFSAKTTDAYLREGLRL 193 >UniRef50_Q5GT34 Holliday junction ATP-dependent DNA helicase ruvA n=13 Tax=Rickettsiales RepID=RUVA_WOLTR Length = 196 Score = 160 bits (406), Expect = 3e-38, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 19/202 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHF--VVREDAQ 58 MIG L G + E +++ V VGY +++ + G + + RE+ Sbjct: 1 MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKAL-NVCYIGSKIKLLIETCANNRENTT 59 Query: 59 LLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGK 118 LYGF NK+E++ + L+K +GV K A++ILS ++ +Q A+ E+ AL K+ G+G Sbjct: 60 QLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKLTPEQLFLAIMNEDKIAL-KISGLGP 118 Query: 119 KTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEAS 178 K R+I E+ + L + + ++AV+AL+ LGY+ + Sbjct: 119 KLINRIITELSGKVSKLETN--------------NNNFYPINEDAVSALINLGYEKTKVY 164 Query: 179 RMVSKIARPDASSETLIREALR 200 + K +P+ ++ +IR AL+ Sbjct: 165 DTIKK-YKPNLDTKDIIRTALK 185 >UniRef50_C0QRQ4 Holliday junction DNA helicase RuvA n=1 Tax=Persephonella marina EX-H1 RepID=C0QRQ4_PERMH Length = 179 Score = 159 bits (403), Expect = 5e-38, Method: Composition-based stats. Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 27/201 (13%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI L+G I K+ + +I++G V P + +++VF +++D L Sbjct: 1 MIEFLKGKIKHKKDDIYIIDLGTVALRFRSPS-------DLKDQSVVFIEMFIKDDRVEL 53 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF +ER +F L+ NGVG K AL+IL S ++F VE ++ L G+GKKT Sbjct: 54 YGFKTPEEREIFNRLLSINGVGVKHALSILRSFSPERFFEIVENRDITTLTTAQGVGKKT 113 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A+R+++E++ + + ++ ++ V AL LG+ + + Sbjct: 114 AQRIVLELQGKLDFIE--------------------NELLKDLVDALTGLGFDKKRVLSV 153 Query: 181 VSKIARPDASSETLIREALRA 201 + + + E ++ AL+ Sbjct: 154 AKDVLKETDNLEKALKLALQK 174 >UniRef50_UPI0001C31CBF Holliday junction DNA helicase RuvA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CBF Length = 198 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 16/205 (7%) Query: 1 MIGRLRGIIIEKQP-----PLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVRE 55 MI +RG + ++P V+++V GVGY + + ++P AG+ + +H +VR+ Sbjct: 1 MIALVRGEVAGRRPAAPAGGDVVVDVNGVGYRLAVSSETLKQVPAAGKRVTLHSHLIVRD 60 Query: 56 DAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPG 115 DA LYGF ++ER LF L+ VGPK+ALA+LSG + ++ + A+ + +PG Sbjct: 61 DALQLYGFATEEERDLFLMLLGVQSVGPKVALAVLSGGTPRELLGALAAGDAARFQAVPG 120 Query: 116 IGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ 175 IGK+TAER+IVE++++ A S A+DD A LV LG+ Sbjct: 121 IGKRTAERIIVELREK---------AGVAVPDDAVHGSVASDDPRTLAREGLVGLGFSLD 171 Query: 176 EASRMVSKIARPDASSETLIREALR 200 EA R++ + ++E LI ALR Sbjct: 172 EAERLLKRAPGE--TAEELIAHALR 194 >UniRef50_Q98PR2 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Mycoplasma pulmonis RepID=RUVA_MYCPU Length = 197 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 15/202 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M+ G II ++ E GY +++ E E + ++ + + E + L Sbjct: 1 MLLYRLGKIIHVNKKYIIFESDSAGYTINI---TRAENFEKDRTLKLYIYELSNEYQKTL 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +ER LF++LI NG+GP++AL IL ++ + + L + P I K Sbjct: 58 YGFTHFKERVLFEDLISINGIGPRIAL-ILLNDGWEKIASLIANGNWETLSRYPYINVKN 116 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 ++I E+++++ L A +A L LG+K ++ Sbjct: 117 CHQIIFELQNKWAKF----------LEKDEKVPSANIQNISDATETLKMLGFKREQIKYA 166 Query: 181 VSKIARPDASSETLIREALRAA 202 + D ETL+ A++ Sbjct: 167 LESANLQD-DVETLVENAIKKI 187 >UniRef50_C3XDN4 Holliday junction DNA helicase motor protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XDN4_9HELI Length = 189 Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 20/202 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI RL+G I + P V +EV GV Y V + + L + ++RED+ LL Sbjct: 1 MIVRLKGNIEKLLPTGVELEVSGVTYMVEISLLTSAALQNK-THVTLEIAEIIREDSHLL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++ER +F +L+K NGVG K+AL ILS S +QF+ V+ + AL + GIG K Sbjct: 60 YGFETRREREVFLQLLKVNGVGAKIALMILSSYSVEQFLAIVQTNNLAALKGVKGIGTKV 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 A ++++E+ T + Q A ALVALG+K + ++ Sbjct: 120 AGKIMLELAG-----------------YTQSIQTPNNVNVQLAHEALVALGFKDTQITQA 162 Query: 181 VSKIARP--DASSETLIREALR 200 + ++ +++ L+ Sbjct: 163 LQGLSNEILQMPPNDMVKAILQ 184 >UniRef50_Q4A7W5 Holliday junction ATP-dependent DNA helicase ruvA n=5 Tax=Mycoplasma RepID=RUVA_MYCH7 Length = 221 Score = 156 bits (394), Expect = 6e-37, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 21/218 (9%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 M G I+ K +++E G GY +++P + + ++ + + ++ Sbjct: 1 MQIYQFGKIVSKNKNYLILENHGSGYLIYVPRIDRFS---RDENRKIYIYEHENDYTKIT 57 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF + +ER LF++LI GVGPK A++ L+ Q +N + + L K+P + +K Sbjct: 58 YGFASFRERILFEDLISIQGVGPKTAISALNS-GMQNLINLIAANDWKTLAKIPYLSEKN 116 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPA----------------SPATDDAEQEAV 164 A++++ E + +++ + + + S S D Sbjct: 117 AKQIVFEFQKKYERFNENHKNQTEETNQDSQEKELEKNDDLADITIQKSNLEDKTAANLE 176 Query: 165 AALVALGYKPQEASRMVSKIARPDASSETLIREALRAA 202 L LG+KP++ ++K+ P+ + E LI A++ Sbjct: 177 DTLKMLGFKPRQIDYALTKVE-PNENFENLIENAIKII 213 >UniRef50_A7HL71 Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=RUVA_FERNB Length = 188 Score = 154 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 23/203 (11%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI + GI + +L+ + GV + + F E G + +V+T +V ++ + Sbjct: 1 MIEIIEGIYKGRSEGKILVSINGVVFGIITDAESFSE-FNEGDKILVYTKLIVSQEDMTI 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF++K ++ F++LIK + +GPK A+ ILS + NA+ +V L +PGIG+KT Sbjct: 60 YGFDSKVKKETFEKLIKVSKLGPKTAIKILSSTTVDFLSNAIATGDVEKLSSIPGIGRKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180 AER+I E+KD F+ + + A+ ALV+LGY +A Sbjct: 120 AERMITELKDEFEVVEVNEEMLE-------------------AIEALVSLGYSKTQARNA 160 Query: 181 VSKIARPDA---SSETLIREALR 200 VSK+ + + +I+EAL+ Sbjct: 161 VSKVLKESPNISNVSKIIKEALK 183 >UniRef50_A4AJX1 Holliday junction DNA helicase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJX1_9ACTN Length = 205 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 16/204 (7%) Query: 1 MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60 MI LRG ++ ++IEVGGVG V + + G E + T +VRED L Sbjct: 1 MISSLRGTVLAAVGTSIVIEVGGVGLSVSVIPEHALSV-RVGAETQLNTVLIVREDDLSL 59 Query: 61 YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120 YGF ++E +F L GVGPK A+ +L+ ++ AV E A K+ GIG KT Sbjct: 60 YGFRTREELDVFALLRGVTGVGPKSAMGVLAALTPDDIARAVAEENDSAFRKVTGIGPKT 119 Query: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQ----- 175 A+ +++ + + + + P S A + AL LG+ + Sbjct: 120 AKLIVLNLTGKLE----------VSALKRGPDSVAATPISESVSMALQGLGWSEKLARPA 169 Query: 176 EASRMVSKIARPDASSETLIREAL 199 + +++ ++R AL Sbjct: 170 AEAAFAEASEAEKENTQAILRRAL 193 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.165 0.518 Lambda K H 0.267 0.0504 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,560,892,622 Number of Sequences: 3077464 Number of extensions: 80995107 Number of successful extensions: 258295 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 874 Number of HSP's successfully gapped in prelim test: 278 Number of HSP's that attempted gapping in prelim test: 254434 Number of HSP's gapped (non-prelim): 1463 length of query: 203 length of database: 1,040,396,356 effective HSP length: 122 effective length of query: 81 effective length of database: 664,945,748 effective search space: 53860605588 effective search space used: 53860605588 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 90 (39.0 bits)