17/01/2012 06:25:01 : INFO  : Run start: Tue Jan 17 06:24:58 GMT 2012
17/01/2012 06:25:12 : INFO  : Initialised job
17/01/2012 06:25:16 : INFO  : Renaming log file 'phyre2_20120117_062457.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/be3676e92ac5d33b/phyre_20120117_062457.log'
17/01/2012 06:25:19 : INFO  : Initialised job:
Sequence
>batch____
MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPEERLVHSF
HSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQKT
MPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQV
WIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFN
LNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN

17/01/2012 06:25:21 : INFO  : Checked sequence
17/01/2012 06:25:29 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 06:25:31 : INFO  : PSI-BLAST 3 iterations
17/01/2012 06:27:39 : INFO  : PSI-BLAST 5 iterations
17/01/2012 06:30:01 : INFO  : Finished PSI-BLAST
17/01/2012 06:30:06 : INFO  : Running Buildali to generate a3m file
17/01/2012 06:41:02 : INFO  : Converting to HMM
17/01/2012 06:41:07 : INFO  : Calibrating HMM
17/01/2012 06:41:27 : INFO  : Searching HMM database
17/01/2012 06:47:56 : INFO  : Finished buildali
17/01/2012 06:47:59 : INFO  : Predicting secondary structure
17/01/2012 06:48:15 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 06:48:18 : INFO  : Predicting Disordered regions
17/01/2012 06:48:26 : INFO  : Predicted Disorder (Disopred)
17/01/2012 06:48:29 : INFO  : Running memsat_svm check
17/01/2012 06:55:51 : INFO  : Globular protein
17/01/2012 06:55:53 : INFO  : Predicted Transmembrane (memsat_svm) ID 'be3676e92ac5d33b'
17/01/2012 06:55:57 : INFO  : Initialising fold library search
17/01/2012 06:56:04 : INFO  : Initialised search input
17/01/2012 06:56:09 : INFO  : Building Ensemble models
17/01/2012 06:56:15 : INFO  : Building hh.c1c8uA_.model.1.pdb
17/01/2012 06:56:47 : INFO  : Building c1c8uA_.1.pdb
17/01/2012 06:57:19 : INFO  : Building c3rd7A_.2.pdb
17/01/2012 06:57:49 : INFO  : Building c3rqbB_.3.pdb
17/01/2012 06:58:19 : INFO  : Building c3bbjA_.4.pdb
17/01/2012 06:58:48 : INFO  : Building c3cjyA_.5.pdb
17/01/2012 06:59:18 : INFO  : Building d1c8ua2.6.pdb
17/01/2012 06:59:49 : INFO  : Building d1c8ua1.7.pdb
17/01/2012 07:00:21 : INFO  : Building d1tbua1.8.pdb
17/01/2012 07:00:51 : INFO  : Building c3b7kA_.9.pdb
17/01/2012 07:01:21 : INFO  : Building c2gvhC_.10.pdb
17/01/2012 07:01:52 : INFO  : Building c2pimA_.11.pdb
17/01/2012 07:02:22 : INFO  : Building d1wlua1.12.pdb
17/01/2012 07:02:53 : INFO  : Building c2qwzB_.13.pdb
17/01/2012 07:03:23 : INFO  : Building d1zkia1.14.pdb
17/01/2012 07:03:53 : INFO  : Building d2h4ua1.15.pdb
17/01/2012 07:04:25 : INFO  : Building d2hboa1.16.pdb
17/01/2012 07:04:57 : INFO  : Building d2f0xa1.17.pdb
17/01/2012 07:05:28 : INFO  : Building c3lbeA_.18.pdb
17/01/2012 07:05:58 : INFO  : Building c3f1tB_.19.pdb
17/01/2012 07:06:29 : INFO  : Building d2fs2a1.20.pdb
17/01/2012 07:07:34 : INFO  : Finished HH model building
17/01/2012 07:07:38 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 07:08:44 : INFO  : html domain output complete ID 'be3676e92ac5d33b'
17/01/2012 07:49:38 : INFO  : Run end  : Tue Jan 17 07:49:36 GMT 2012
