Phyre 2 alignment of P0AGG2 with c3eweC_

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Job Description | P0AGG2
Confidence | 48.69% | Date | Thu Jan 5 11:29:03 GMT 2012
Rank | 116 | Aligned Residues | 26
% Identity | 19% | Template | c3eweC_
PDB info | PDB header:protein transport,structural protein | Chain: C: PDB Molecule:nucleoporin seh1; | PDBTitle: crystal structure of the nup85/seh1 complex
Resolution | 3.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 261 | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | .
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Query Sequence |  | V | R | G | E | F | Y | T | Q | D | G | V | L | V | A | S | T | V | Q | E | G | V | M | R | N | H | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | W | S | V | S | W | N | L | T | G | T | I | L | S | S | A | G | D | D | G | K | V | R | L | W | K
Template Known Secondary structure |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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