Phyre 2 alignment of P0AGG2 with c3greA_

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Job Description | P0AGG2
Confidence | 24.41% | Date | Thu Jan 5 11:29:03 GMT 2012
Rank | 139 | Aligned Residues | 26
% Identity | 12% | Template | c3greA_
PDB info | PDB header:signaling protein,protein binding | Chain: A: PDB Molecule:serine/threonine-protein kinase vps15; | PDBTitle: crystal structure of saccharomyces cerevisiae vps15 wd2 repeat domain
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 261 | . | . | . | . | . | . | . | . | 270 | . |  | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | R | G | E | F | Y | T | Q | D | G | V | . | L | V | A | S | T | V | Q | E | G | V | M | R | N | H | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | T | S | S | A | V | S | P | G | E | T | P | Y | L | I | T | G | S | D | Q | G | V | I | K | I | W | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1083 | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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