BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (1538 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Ent... 3091 0.0 UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteoba... 1724 0.0 UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterob... 1724 0.0 UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Coryne... 1320 0.0 UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerth... 1307 0.0 UniRef50_Q5Z170 Putative ATP-dependent DNA helicase n=3 Tax=Cory... 1296 0.0 UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomyceta... 1276 0.0 UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinom... 1263 0.0 UniRef50_C8NN73 ATP-dependent helicase n=12 Tax=Corynebacterium ... 1262 0.0 UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomyceta... 1251 0.0 UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacter... 1246 0.0 UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacter... 1245 0.0 UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium gluta... 1241 0.0 UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brach... 1217 0.0 UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrob... 1207 0.0 UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia... 1192 0.0 UniRef50_A1A256 ATP-dependent helicase II n=4 Tax=Bifidobacteriu... 1184 0.0 UniRef50_C0XQ89 Lhr family helicase n=2 Tax=Corynebacterium RepI... 1164 0.0 UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Stre... 1159 0.0 UniRef50_D1C082 DEAD/H associated domain protein n=1 Tax=Xylanim... 1147 0.0 UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinom... 1139 0.0 UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliang... 1092 0.0 UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Ac... 1083 0.0 UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia... 1083 0.0 UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=... 1073 0.0 UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococ... 1068 0.0 UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalk... 1055 0.0 UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein... 1055 0.0 UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candi... 1040 0.0 UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Microco... 1026 0.0 UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria Rep... 1013 0.0 UniRef50_D2QB27 ATP-dependent helicase lhr n=3 Tax=Bifidobacteri... 983 0.0 UniRef50_C0E805 Putative uncharacterized protein n=2 Tax=Coryneb... 962 0.0 UniRef50_B3DRA3 Lhr-like helicase n=11 Tax=Bacteria RepID=B3DRA3... 961 0.0 UniRef50_C8RVX4 ATP-dependent DNA helicase (Fragment) n=2 Tax=Co... 959 0.0 UniRef50_Q67R22 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 926 0.0 UniRef50_D2NPL8 Lhr-like helicase n=2 Tax=Rothia mucilaginosa Re... 880 0.0 UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytoc... 872 0.0 UniRef50_A0LV08 DEAD/H associated domain protein n=1 Tax=Acidoth... 867 0.0 UniRef50_D0WMV8 Putative DEAD/DEAH box helicase n=1 Tax=Actinomy... 856 0.0 UniRef50_D1NRV9 ATP-dependent helicase II n=1 Tax=Bifidobacteriu... 682 0.0 UniRef50_C6CYT0 DEAD/DEAH box helicase domain protein n=1 Tax=Pa... 628 e-178 UniRef50_C4DG18 ATP dependent helicase, Lhr family n=1 Tax=Stack... 625 e-177 UniRef50_C6MZM9 DEAD/DEAH box helicase-like protein n=1 Tax=Legi... 622 e-176 UniRef50_Q2SEQ3 Lhr-like helicase n=1 Tax=Hahella chejuensis KCT... 614 e-174 UniRef50_B5E8L0 DEAD/H associated domain protein n=1 Tax=Geobact... 614 e-174 UniRef50_C1RMK0 Lhr-like helicase n=1 Tax=Cellulomonas flavigena... 606 e-171 UniRef50_B5JLM6 DEAD/H associated family n=1 Tax=Verrucomicrobia... 597 e-168 UniRef50_A4BMP7 Probable ATP-dependent DNA helicase n=1 Tax=Nitr... 584 e-164 UniRef50_C5EPU4 Putative uncharacterized protein n=4 Tax=Clostri... 577 e-163 UniRef50_Q13M86 ATP-dependent helicase, DEAD/DEAH family n=5 Tax... 577 e-162 UniRef50_A3ZQS6 DEAD/DEAH box helicase n=1 Tax=Blastopirellula m... 567 e-159 UniRef50_C1F8X5 Helicase, DEAD/DEAH domain protein n=1 Tax=Acido... 567 e-159 UniRef50_A8RJ57 Putative uncharacterized protein n=1 Tax=Clostri... 560 e-157 UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkho... 555 e-156 UniRef50_C8W110 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 554 e-155 UniRef50_Q01U88 ATP dependent helicase, Lhr family n=1 Tax=Candi... 553 e-155 UniRef50_A9KJU0 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 553 e-155 UniRef50_Q3BSA5 ATP-dependent DNA helicase Lhr n=12 Tax=Bacteria... 540 e-151 UniRef50_D2L062 DEAD/DEAH box helicase domain protein n=2 Tax=De... 518 e-145 UniRef50_D0LRM6 DEAD/H associated domain protein n=1 Tax=Haliang... 513 e-143 UniRef50_Q4K580 Lhr n=14 Tax=Proteobacteria RepID=Q4K580_PSEF5 496 e-138 UniRef50_Q1IK30 DEAD/DEAH box helicase-like n=3 Tax=Bacteria Rep... 492 e-137 UniRef50_A7H7C5 DEAD/H associated domain protein n=1 Tax=Anaerom... 489 e-136 UniRef50_D2MKC9 DEAD/H associated domain protein n=1 Tax=Candida... 488 e-136 UniRef50_A6CAB6 DEAD/DEAH box helicase-like protein n=1 Tax=Plan... 487 e-135 UniRef50_D2QY58 DEAD/H associated domain protein n=1 Tax=Pirellu... 483 e-134 UniRef50_D2LLH6 DEAD/H associated domain protein n=3 Tax=Aciduli... 456 e-126 UniRef50_A9GB61 Putative ATP-dependent helicase, N-terminal n=1 ... 450 e-124 UniRef50_C7DIU9 DEAD/H associated domain protein n=1 Tax=Candida... 432 e-119 UniRef50_Q6L0N7 ATP-dependent helicase n=1 Tax=Picrophilus torri... 424 e-116 UniRef50_B1FTZ8 DEAD/H associated domain protein n=2 Tax=Burkhol... 412 e-113 UniRef50_O27830 Uncharacterized ATP-dependent helicase MTH_1802 ... 402 e-110 UniRef50_A5UKH9 ATP-dependent helicase, Lhr-like protein n=5 Tax... 396 e-108 UniRef50_UPI0000F5176A ATP-dependent helicase n=1 Tax=Ferroplasm... 390 e-106 UniRef50_Q8U202 Large helicase-related protein n=3 Tax=Thermococ... 386 e-105 UniRef50_Q3JLU0 ATP-dependent helicase, DEAD/DEAH family n=75 Ta... 377 e-102 UniRef50_B3T6F6 Putative DEAD/DEAH box helicase n=1 Tax=uncultur... 377 e-102 UniRef50_Q57742 Uncharacterized ATP-dependent helicase MJ0294 n=... 376 e-102 UniRef50_D2EED6 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 370 e-100 UniRef50_C5U8C6 DEAD/H associated domain protein n=1 Tax=Methano... 359 6e-97 UniRef50_Q18G68 Lhr-like helicase n=2 Tax=Halobacteriaceae RepID... 351 1e-94 UniRef50_Q0W5W5 Lhr-like RNA helicase n=12 Tax=Euryarchaeota Rep... 350 3e-94 UniRef50_D2RXL5 DEAD/H associated domain protein n=5 Tax=Halobac... 348 7e-94 UniRef50_UPI0001745EC8 large helicase-related protein (lhr-2) n=... 307 2e-81 UniRef50_B4D6Q0 DEAD/H associated domain protein n=1 Tax=Chthoni... 291 2e-76 UniRef50_Q46BX9 ATP-dependent RNA helicase n=4 Tax=Methanosarcin... 289 5e-76 UniRef50_D2EE81 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 278 2e-72 UniRef50_Q0W7D8 ATP-dependent RNA helicase n=3 Tax=Euryarchaeota... 272 6e-71 UniRef50_Q649R1 ATP-dependent helicase n=4 Tax=environmental sam... 272 6e-71 UniRef50_A1RT46 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 271 2e-70 UniRef50_A8M9R8 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 269 6e-70 UniRef50_A8MBG3 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 269 8e-70 UniRef50_B1Y9J8 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 264 3e-68 UniRef50_B1ZZM6 DEAD/H associated domain protein n=1 Tax=Opitutu... 263 3e-68 UniRef50_B5ICF6 DEAD/DEAH box helicase domain protein n=2 Tax=Ac... 259 6e-67 UniRef50_A3CUY2 DEAD/DEAH box helicase domain protein n=5 Tax=Me... 254 1e-65 UniRef50_A2BMA9 DEAD/DEAH box helicase n=1 Tax=Hyperthermus buty... 250 3e-64 UniRef50_Q1QRK7 DEAD/DEAH box helicase-like n=6 Tax=Alphaproteob... 244 2e-62 UniRef50_O29116 Large helicase-related protein (Lhr-1) n=2 Tax=A... 242 8e-62 UniRef50_C7DIA3 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 241 1e-61 UniRef50_Q1YKM0 ATP-dependent helicase n=2 Tax=Aurantimonas mang... 241 1e-61 UniRef50_Q2IR64 DEAD/DEAH box helicase n=81 Tax=Alphaproteobacte... 238 2e-60 UniRef50_C5A764 ATP-dependent helicase, lhr-like protein (Lhr) n... 236 7e-60 UniRef50_Q0C4L0 ATP-dependent helicase, DEAD/DEAH family n=6 Tax... 235 1e-59 UniRef50_Q6KZS3 ATP-dependent RNA helicase n=4 Tax=Thermoplasmat... 234 2e-59 UniRef50_A9A127 DEAD/DEAH box helicase domain protein n=2 Tax=Th... 233 4e-59 UniRef50_B9LRP7 DEAD/DEAH box helicase domain protein n=7 Tax=Ha... 232 7e-59 UniRef50_B1L6H5 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 232 8e-59 UniRef50_C5AJ01 DEAD/H associated domain protein n=1 Tax=Burkhol... 232 1e-58 UniRef50_C3NGE7 DEAD/DEAH box helicase domain protein n=12 Tax=S... 232 1e-58 UniRef50_A8AC71 DEAD/DEAH box helicase domain protein n=1 Tax=Ig... 229 8e-58 UniRef50_Q11PA5 ATP-dependent helicase n=2 Tax=Sphingobacteriale... 228 1e-57 UniRef50_Q6MCM6 Putative uncharacterized protein n=1 Tax=Candida... 228 2e-57 UniRef50_Q167Y6 ATP-dependent helicase, DEAD/DEAH box family n=2... 228 2e-57 UniRef50_A4CH41 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 227 3e-57 UniRef50_Q3AJL5 DEAD/DEAH box helicase-like n=17 Tax=Cyanobacter... 225 1e-56 UniRef50_Q0BTQ2 ATP-dependent helicase n=27 Tax=Alphaproteobacte... 223 5e-56 UniRef50_B6YWG2 Large helicase-related protein n=1 Tax=Thermococ... 223 6e-56 UniRef50_Q1CZG3 ATP-dependent helicase, DEAD/DEAH box family n=5... 222 8e-56 UniRef50_D0DB43 Dead/H associated domain protein n=4 Tax=Alphapr... 221 3e-55 UniRef50_D2RFY4 DEAD/DEAH box helicase domain protein n=1 Tax=Ar... 219 8e-55 UniRef50_A8A8X3 DEAD/DEAH box helicase domain protein n=1 Tax=Ig... 218 2e-54 UniRef50_A1RYY4 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 218 2e-54 UniRef50_Q3IP60 Lhr-like helicase n=5 Tax=Halobacteriaceae RepID... 217 4e-54 UniRef50_A4YHK3 DEAD/DEAH box helicase domain protein n=12 Tax=S... 213 4e-53 UniRef50_B5IHC0 DEAD/DEAH box helicase domain protein (Fragment)... 212 8e-53 UniRef50_B4RRM3 ATP-dependent RNA helicase, DEAD/DEAH box family... 211 3e-52 UniRef50_Q8TGY8 Lhr-like Superfamily II helicase n=1 Tax=Methano... 210 4e-52 UniRef50_Q7UX43 Putative ATP-dependent helicase n=1 Tax=Rhodopir... 209 7e-52 UniRef50_C1YNJ7 Putative uncharacterized protein n=1 Tax=Nocardi... 208 2e-51 UniRef50_A9WLQ1 ATP-dependent helicase n=3 Tax=Micrococcaceae Re... 204 2e-50 UniRef50_B6YUR4 Large helicase-related protein n=5 Tax=Euryarcha... 204 2e-50 UniRef50_Q470G5 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 201 1e-49 UniRef50_A3DN94 DEAD/DEAH box helicase domain protein n=1 Tax=St... 199 7e-49 UniRef50_Q9Y9V1 Putative ATP-dependent helicase n=1 Tax=Aeropyru... 196 4e-48 UniRef50_C5CN99 DEAD/H associated domain protein n=9 Tax=Proteob... 195 9e-48 UniRef50_B8D5X5 DEAD/DEAH box helicase domain protein n=1 Tax=De... 193 4e-47 UniRef50_C6Y055 DEAD/H associated domain protein n=7 Tax=Bactero... 193 5e-47 UniRef50_A2BLG2 ATP dependent helicase n=1 Tax=Hyperthermus buty... 187 2e-45 UniRef50_Q2SGL4 Lhr-like helicase n=5 Tax=Bacteria RepID=Q2SGL4_... 175 1e-41 UniRef50_D1TEQ3 Lhr-like helicase-like protein n=1 Tax=Burkholde... 172 1e-40 UniRef50_B8JFR7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 169 8e-40 UniRef50_A4BLZ4 Lhr-like helicase n=1 Tax=Nitrococcus mobilis Nb... 168 1e-39 UniRef50_B2A401 DEAD/DEAH box helicase domain protein n=6 Tax=Fi... 166 5e-39 UniRef50_A1TJ45 DEAD/H associated domain protein n=5 Tax=Comamon... 165 1e-38 UniRef50_A4FJZ7 Putative ATP-dependent helicase n=1 Tax=Saccharo... 164 3e-38 UniRef50_B8GFB2 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 164 3e-38 UniRef50_A2SRH6 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 161 2e-37 UniRef50_A7IB28 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 160 4e-37 UniRef50_A4TAT7 DEAD/DEAH box helicase domain protein n=4 Tax=Ac... 159 9e-37 UniRef50_A9F615 ATP-dependent helicase n=1 Tax=Sorangium cellulo... 155 1e-35 UniRef50_A1VV81 DEAD/DEAH box helicase domain protein n=1 Tax=Po... 154 3e-35 UniRef50_Q24ZT1 Putative uncharacterized protein n=1 Tax=Desulfi... 151 2e-34 UniRef50_O26412 ATP-dependent helicase n=1 Tax=Methanothermobact... 150 4e-34 UniRef50_C5CE86 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 149 9e-34 UniRef50_C4FYH2 Putative uncharacterized protein n=1 Tax=Abiotro... 148 2e-33 UniRef50_C7RIR1 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 145 1e-32 UniRef50_D0LTA5 3'-5' exonuclease n=2 Tax=Haliangium ochraceum D... 145 1e-32 UniRef50_B2JHB8 DEAD/DEAH box helicase domain protein n=11 Tax=P... 143 5e-32 UniRef50_C7MUN6 Lhr-like helicase n=4 Tax=Actinomycetales RepID=... 142 1e-31 UniRef50_C6IVI9 DEAD/DEAH box helicase domain-containing protein... 142 1e-31 UniRef50_A1BIJ8 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 140 5e-31 UniRef50_C7RDI1 DEAD/DEAH box helicase domain protein n=3 Tax=An... 137 3e-30 UniRef50_C5RNG9 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 135 1e-29 UniRef50_B8I966 DEAD/DEAH box helicase domain protein n=8 Tax=ce... 134 2e-29 UniRef50_C7PFC4 DEAD/DEAH box helicase domain protein n=2 Tax=Ch... 134 3e-29 UniRef50_D2BWD9 DEAD/DEAH box helicase domain protein n=6 Tax=Ga... 131 3e-28 UniRef50_Q47TW5 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 130 4e-28 UniRef50_D0LS76 DEAD/DEAH box helicase domain protein n=1 Tax=Ha... 127 4e-27 UniRef50_B8J8Q2 DEAD/H associated domain protein n=3 Tax=Cystoba... 127 5e-27 UniRef50_Q2J8S7 DEAD/DEAH box helicase-like n=3 Tax=Actinomyceta... 124 2e-26 UniRef50_B0C714 DEAD/DEAH box RNA helicase n=1 Tax=Acaryochloris... 118 2e-24 UniRef50_Q07GR1 ATP-dependent helicase, putative n=5 Tax=Alphapr... 117 4e-24 UniRef50_D1VE26 DEAD/DEAH box helicase domain protein n=1 Tax=Fr... 117 5e-24 UniRef50_C5B5W2 Putative DEAD/DEAH box helicase domain protein n... 115 1e-23 UniRef50_B7L2W3 DEAD/DEAH box helicase domain protein n=7 Tax=Al... 114 2e-23 UniRef50_B8IW51 DEAD/DEAH box helicase domain protein n=2 Tax=Me... 111 2e-22 UniRef50_B4SBA5 DEAD/DEAH box helicase domain protein n=1 Tax=Pe... 109 9e-22 UniRef50_Q30VA0 DEAD/DEAH box helicase-like n=2 Tax=Desulfovibri... 109 9e-22 UniRef50_Q5V826 ATP-dependant helicase n=1 Tax=Haloarcula marism... 108 2e-21 UniRef50_C8RVX3 ATP-dependent DNA helicase (Fragment) n=2 Tax=Co... 107 3e-21 UniRef50_C1ZM72 Lhr-like helicase n=1 Tax=Planctomyces limnophil... 107 5e-21 UniRef50_Q02AZ8 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 106 8e-21 UniRef50_C4FC75 Putative uncharacterized protein n=1 Tax=Collins... 106 1e-20 UniRef50_C0WD26 DEAD/DEAH helicase n=13 Tax=Bacteria RepID=C0WD2... 105 1e-20 UniRef50_C7R1M0 DEAD/DEAH box helicase domain protein n=1 Tax=Jo... 105 1e-20 UniRef50_A4XK34 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 104 3e-20 UniRef50_A8ZT74 DEAD/DEAH box helicase domain protein n=2 Tax=De... 104 3e-20 UniRef50_A1RZW9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 104 3e-20 UniRef50_B2SWA3 ATP-dependent DNA helicase n=3 Tax=Xanthomonas o... 101 2e-19 UniRef50_B2SVX9 ATP-dependent RNA helicase n=15 Tax=Proteobacter... 101 2e-19 UniRef50_Q6BK52 DEHA2F24838p n=6 Tax=Saccharomycetaceae RepID=Q6... 100 3e-19 UniRef50_C0QJG3 ATP-dependent DEAD/DEAH box helicase family prot... 100 7e-19 UniRef50_Q049S7 Lhr-like helicase n=12 Tax=Bacteria RepID=Q049S7... 100 8e-19 UniRef50_A7AW09 Helicase, putative n=2 Tax=Eukaryota RepID=A7AW0... 99 1e-18 UniRef50_B8DQM2 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 99 2e-18 UniRef50_D1U6T8 DEAD/DEAH box helicase domain protein n=1 Tax=De... 99 2e-18 UniRef50_C8WZA3 DEAD/DEAH box helicase domain protein n=2 Tax=De... 98 3e-18 UniRef50_C1XJQ7 Helicase family protein with metal-binding cyste... 97 6e-18 UniRef50_D2RJD3 DEAD/DEAH box helicase domain protein n=1 Tax=Ac... 97 7e-18 UniRef50_A3DPM4 DEAD/DEAH box helicase domain protein n=2 Tax=De... 96 9e-18 UniRef50_D2NR92 Distinct helicase family protein n=2 Tax=Rothia ... 96 2e-17 UniRef50_B8FB49 DEAD/DEAH box helicase domain protein n=1 Tax=De... 95 2e-17 UniRef50_A4FZE4 DEAD/DEAH box helicase domain protein n=4 Tax=Me... 95 2e-17 UniRef50_P51979 ATP-dependent DNA helicase MER3 n=8 Tax=Saccharo... 95 2e-17 UniRef50_B5CL83 Putative uncharacterized protein n=4 Tax=Clostri... 94 4e-17 UniRef50_B6YXM0 DNA helicase n=5 Tax=Thermococcus RepID=B6YXM0_T... 94 4e-17 UniRef50_D0NDF2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 94 4e-17 UniRef50_Q05549 Putative ATP-dependent helicase HRQ1 n=12 Tax=Sa... 94 5e-17 UniRef50_Q6C5S5 YALI0E15576p n=1 Tax=Yarrowia lipolytica RepID=Q... 94 6e-17 UniRef50_Q017R5 Putative ATP-dependent RNA helicase (ISS) (Fragm... 94 6e-17 UniRef50_A7BAC7 Putative uncharacterized protein n=1 Tax=Actinom... 93 7e-17 UniRef50_B8J202 DEAD/DEAH box helicase domain protein n=2 Tax=De... 93 9e-17 UniRef50_D1H2W4 Whole genome shotgun sequence of line PN40024, s... 93 9e-17 UniRef50_B2V5V1 DEAD/DEAH box helicase domain protein n=3 Tax=Su... 92 2e-16 UniRef50_Q74ZT5 AGR113Wp n=3 Tax=cellular organisms RepID=Q74ZT5... 91 3e-16 UniRef50_B9WA22 Putative uncharacterized protein n=5 Tax=Sacchar... 91 4e-16 UniRef50_Q2GRG2 Putative uncharacterized protein n=1 Tax=Chaetom... 91 4e-16 UniRef50_O73946 Putative ski2-type helicase n=3 Tax=Pyrococcus R... 91 4e-16 UniRef50_A9A2H7 DEAD/DEAH box helicase domain protein n=2 Tax=Th... 91 5e-16 UniRef50_C0VYP4 ATP-dependent helicase n=1 Tax=Actinomyces coleo... 90 6e-16 UniRef50_Q8ZSF8 Alr7552 protein n=2 Tax=Nostocaceae RepID=Q8ZSF8... 90 8e-16 UniRef50_D0WK34 ATP-dependent RNA helicase, DEAD/DEAH box family... 90 9e-16 UniRef50_B0RA13 Putative helicase n=1 Tax=Halobacterium salinaru... 89 1e-15 UniRef50_B4W2E3 DEAD/DEAH box helicase domain protein n=1 Tax=Mi... 89 1e-15 UniRef50_C8VXB9 DEAD/DEAH box helicase domain protein n=1 Tax=De... 89 1e-15 UniRef50_C1SGP7 Helicase family protein with metal-binding cyste... 89 1e-15 UniRef50_C7MGF1 Helicase family protein with metal-binding cyste... 89 1e-15 UniRef50_A5E7Q8 Putative uncharacterized protein n=1 Tax=Loddero... 89 1e-15 UniRef50_C1E4U3 Predicted protein (Fragment) n=2 Tax=Micromonas ... 89 2e-15 UniRef50_Q10YD0 DEAD/DEAH box helicase-like n=1 Tax=Trichodesmiu... 89 2e-15 UniRef50_C0QU99 ATP-dependent rna helicase, dead/deah box family... 88 3e-15 UniRef50_Q4UHC2 DEAD-box helicase, putative n=2 Tax=Theileria Re... 87 4e-15 UniRef50_B0EGZ1 U5 small nuclear ribonucleoprotein 200 kDa helic... 87 4e-15 UniRef50_B2AQ90 Predicted CDS Pa_4_4960 n=1 Tax=Podospora anseri... 87 4e-15 UniRef50_Q9UT24 Pre-mRNA-splicing factor brr2 n=5 Tax=Fungi/Meta... 87 5e-15 UniRef50_Q72FF8 ATP-dependent RNA helicase, DEAD/DEAH box family... 87 5e-15 UniRef50_Q4PCP0 Putative uncharacterized protein n=1 Tax=Ustilag... 87 5e-15 UniRef50_Q6Z8Y2 Os02g0111900 protein n=2 Tax=Oryza sativa RepID=... 87 8e-15 UniRef50_A4QWU8 Putative uncharacterized protein n=1 Tax=Magnapo... 86 9e-15 UniRef50_C5FG79 Hrq1p n=1 Tax=Microsporum canis CBS 113480 RepID... 86 1e-14 UniRef50_A4RYF7 Predicted protein n=1 Tax=Ostreococcus lucimarin... 86 1e-14 UniRef50_Q9YFQ8 Putative ski2-type helicase n=1 Tax=Aeropyrum pe... 86 1e-14 UniRef50_A7IB61 Putative ski2-type helicase n=5 Tax=Methanomicro... 86 1e-14 UniRef50_A8TGW0 DEAD/DEAH box helicase domain protein n=2 Tax=Me... 86 2e-14 UniRef50_A6LY55 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 86 2e-14 UniRef50_C0VRF7 ATP-dependent helicase n=2 Tax=Corynebacterium g... 85 2e-14 UniRef50_D0MXB7 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 85 2e-14 UniRef50_Q8TH00 Predicted Superfamily II helicase n=1 Tax=Methan... 85 2e-14 >UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Enterobacteriaceae RepID=LHR_ECOLI Length = 1538 Score = 3091 bits (8015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 1538/1538 (100%), Positives = 1538/1538 (100%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA Sbjct: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG Sbjct: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE Sbjct: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA Sbjct: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN Sbjct: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS Sbjct: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV Sbjct: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD Sbjct: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL Sbjct: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI Sbjct: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN Sbjct: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR Sbjct: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF Sbjct: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA Sbjct: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL Sbjct: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH Sbjct: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 Query: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV Sbjct: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 Query: 1021 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV Sbjct: 1021 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM Sbjct: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 Query: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH Sbjct: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 Query: 1201 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE 1260 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE Sbjct: 1201 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE 1260 Query: 1261 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN Sbjct: 1261 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 Query: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS Sbjct: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 Query: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP Sbjct: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 Query: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP Sbjct: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG Sbjct: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 >UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteobacteria RepID=Q6D6U1_ERWCT Length = 1598 Score = 1724 bits (4465), Expect = 0.0, Method: Compositional matrix adjust. Identities = 912/1587 (57%), Positives = 1136/1587 (71%), Gaps = 68/1587 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ AT DWF+ F PTAVQ W H+LVIAPTGSGKTLAAF++A+DRLF E Sbjct: 16 FTTATLDWFVSQFGTPTAVQDAAWTAIGGGHHSLVIAPTGSGKTLAAFMHAIDRLFSEQV 75 Query: 75 E----DTREAHKRKT-SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + DT+ A R T +R+LYISP+KALG DVQRNL +PL+GI R+RRG+ V L VG Sbjct: 76 KAFTPDTKNARPRATKTRVLYISPVKALGADVQRNLSLPLQGIMQVRQRRGDANVVLTVG 135 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +RTGDT ER++L R PPDILITTPESL+LMLTSRARE LR V T+IIDE+HAVAG+KR Sbjct: 136 LRTGDTTTAERARLVRRPPDILITTPESLFLMLTSRAREALRDVSTIIIDEIHAVAGTKR 195 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G+HLALSLERLDALL T AQRIGLSATVR VA FLGG+RPVT+V PP+ RH +RIV Sbjct: 196 GSHLALSLERLDALLDTPAQRIGLSATVRPVERVAEFLGGERPVTIVAPPSSRHLDVRIV 255 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 VPV +M ++ G ED+ GR GS+WP++E ILD+VL RSTIVF NSRG+ E+LT Sbjct: 256 VPVEDMSNIPEPEHG--EDAGTGRPGSVWPHVEASILDQVLSRRSTIVFANSRGVTERLT 313 Query: 310 ARLNELYAARLQRSPSIAVDA-----AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 ARLNE YAARL + A A +ES +G+T R ++ IARSHHGSVSKE R Sbjct: 314 ARLNEAYAARLAGAEQTASTADSSPSTQYESMAGSTQARSAGAETTIARSHHGSVSKEHR 373 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 A EQALKSGELRCVVATSSLELGIDMG VDLVIQV+ P SVAS LQR+GRAGHQVGG+S Sbjct: 374 AEIEQALKSGELRCVVATSSLELGIDMGLVDLVIQVSAPPSVASALQRVGRAGHQVGGMS 433 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 GL +PR+RRD++DSAVIV+ M GR+E + PP NPLDVLAQQTVAAAAM+ L VD WY+ Sbjct: 434 TGLVYPRSRRDVIDSAVIVDAMLNGRIEAIAPPRNPLDVLAQQTVAAAAMEPLDVDAWYA 493 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 V RA P++ LPR FDATLDML+GRYPS DFS FRP+LVW+RETG L+ARPGAQ LAVT Sbjct: 494 AVCRAGPYRTLPRTAFDATLDMLAGRYPSDDFSGFRPRLVWDRETGQLSARPGAQHLAVT 553 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 SGGTIPDRGM+SV+LPEGEE+AGSRRVGELDEEMVYESRVND+ITLGATSWRIQ+ITRDQ Sbjct: 554 SGGTIPDRGMFSVVLPEGEERAGSRRVGELDEEMVYESRVNDVITLGATSWRIQEITRDQ 613 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---DGAFFSGTIPPWL----- 656 V+V PAPGRSARLPFWRG+G GRPAELGE IG FL L GA S P Sbjct: 614 VVVIPAPGRSARLPFWRGDGIGRPAELGEAIGAFLGQLEPDISGASSSPFPEPDTRTRLE 673 Query: 657 ---AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + N I N+ L+ EQR ATG++P R L++ERCRDE+GDWR+ILHSPYGRR+HEPW Sbjct: 674 AIGLDGNAIGNMLALLSEQRAATGVLPTDRTLIIERCRDELGDWRLILHSPYGRRIHEPW 733 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 A+AIA RI W D +VV+SDDGIVAR PDT G++P A +FLF+P+KL + V AVG S Sbjct: 734 ALAIAQRIRERWKIDPAVVSSDDGIVARFPDT-GRVPGAELFLFDPDKLRRTVSVAVGGS 792 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 ALFAARFRECAARALL+ TPG R+PLWQQRLRA QLLE A+ YP+FP+++ET RECLQ Sbjct: 793 ALFAARFRECAARALLLARSTPGRRSPLWQQRLRAGQLLESARDYPEFPILIETARECLQ 852 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 DVYDL AL+ LMRRLN G +++ +VTT PSPFAT LLFGYVA+FMY++D P+AERRAS+ Sbjct: 853 DVYDLDALDELMRRLNTGSVRLVEVTTEVPSPFATDLLFGYVAQFMYETDVPMAERRASM 912 Query: 894 LSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTV 953 L+LDS LL LLG+V+ ELLDP V+ Q+++ELQRL G RAKG+EG+ DLLRELGP+ Sbjct: 913 LALDSTLLGELLGRVELSELLDPLVMTQLDQELQRLEVGYRAKGKEGVADLLRELGPLCT 972 Query: 954 EDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP 1013 +++A R ++E A++L +L + +R+ MI +E A ++DA RLRDALGV LP LP Sbjct: 973 QEVAARLDSEADEAAAFLNSLESGRRVIRVMIGAREHWASIEDAGRLRDALGVPLPVGLP 1032 Query: 1014 EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN---- 1069 +L + PLR L R+ R T A F LG ++VE L+Q+ EQG +++ Sbjct: 1033 AAFLESTADPLRSLIARFARTRGPFTTGDAASAFGLGASVVEAVLRQIAEQGKLLSGRFG 1092 Query: 1070 -----------------LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQ 1112 L Q+ WV DEVFRRLR+RSLQAAREAT+PV Y RLLLERQ Sbjct: 1093 VRRGMKSPPQVSGDAGPLAQNEWVGDEVFRRLRVRSLQAAREATQPVPRHAYTRLLLERQ 1152 Query: 1113 GVLPATDGSPALFA-STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSE 1171 G++ + S + +++ G EG +GV++VIEQLAG+ LPAS+WE ILPARVRDY+ + Sbjct: 1153 GLVADSSQSAVVKGWNSARGALEGPEGVLQVIEQLAGMPLPASVWERHILPARVRDYAPD 1212 Query: 1172 MLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAE--SFTPAEADQANRSALQQAIVAV 1229 MLD LL++G V+WSG +LG DDGLVA HLQE+A E S + + + S LQ AI+ + Sbjct: 1213 MLDALLSSGTVLWSGHDRLGNDDGLVAFHLQEFAPETLSMSSHASGAPDMSPLQSAILEL 1272 Query: 1230 LADGGAWFAQQISQRIRDKIGE---------SVDLSALQEALWALVWQGVITSDIWAPLR 1280 L+DGGA+F +Q++ +++ + + + L ALW LVW G IT+D PLR Sbjct: 1273 LSDGGAYFVRQLAAQVQVTLAQEYSEQHGAPDILTDNLHTALWDLVWAGCITNDTLTPLR 1332 Query: 1281 ALTRSSSNARTSTRRSHRARRGRPVYAQPVSPR-----VSYNTPNLAGRWSLLQVEPLND 1335 AL + R S R R R + + VS + N LAGRWS+++ EPL D Sbjct: 1333 ALAQVVQQPRPRALSSRRRRGLRGLSSATVSEEFHSGLTALNATTLAGRWSMIRTEPLPD 1392 Query: 1336 TERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGA 1395 T + +A E +LDRY +++R + EN+PGGF ++Q + R MED+GR++RGRFV GLG A Sbjct: 1393 TVKAIAWTEGLLDRYAVVTRNVTVYENLPGGFAALQPVFRGMEDTGRVIRGRFVLGLGAA 1452 Query: 1396 QFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGAL 1455 QFAER T+DRLR+LA + T PVALSA DP N +G +LPWP+H + + P RR GA+ Sbjct: 1453 QFAERTTVDRLRELAEETTTI--PMPVALSAVDPGNPFGTILPWPSHASLMRPARRTGAI 1510 Query: 1456 VVVSGGKLLLYLAQGGKKMLVWQEKEE----LLAPEVFHALTTALRREPRLRFTLTEVND 1511 VV+ GG L+ YL QGG+++ + + ++ AL+TAL R+ R RFTL VN Sbjct: 1511 VVIDGGHLVFYLPQGGRQLFTYIDPDDAAQTEAIAAALAALSTALSRDKRNRFTLELVNG 1570 Query: 1512 LPVRQTPMFTLLREAGFSSSPQGLDWG 1538 +PVR + + L+ GFSS+P+GL WG Sbjct: 1571 VPVRMSKLTPALKAIGFSSAPKGLYWG 1597 >UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterobacteriaceae RepID=C8Q5F9_9ENTR Length = 1525 Score = 1724 bits (4464), Expect = 0.0, Method: Compositional matrix adjust. Identities = 908/1533 (59%), Positives = 1113/1533 (72%), Gaps = 28/1533 (1%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P T+ WF AF PT VQ + W A +++ LVIAPTGSGKTLAAFL+A+D LFRE Sbjct: 9 FLPTTQAWFRAAFAAPTPVQVEAWQAIASAKNCLVIAPTGSGKTLAAFLHAIDALFRERS 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + A KT RILYISP+KAL DVQRNLQ+PL G+ +RR++GE E+ L+VG+R+GD Sbjct: 69 QPATVARSHKT-RILYISPVKALAADVQRNLQLPLAGVEAQRRQQGEAEIALQVGMRSGD 127 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T + ER++L R PPDILITTPESL+LMLTS+ARETLRGV TVI+DEVHAVAGSKRG+HLA Sbjct: 128 TRSAERAQLQRRPPDILITTPESLFLMLTSKARETLRGVSTVIVDEVHAVAGSKRGSHLA 187 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL AQRIGLSATVR VA FLGG VVNP A R Q+ I VPVA+ Sbjct: 188 LSLERLDTLLAQPAQRIGLSATVRPPEAVARFLGGAGETLVVNPAATRPLQLTITVPVAD 247 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 M D+ GSIWP+IE GILDEVLRHR+T+VFTNSRGLAEKLTARLNE Sbjct: 248 MTDIQQRPDAQAAQDGTLAAGSIWPHIEAGILDEVLRHRATLVFTNSRGLAEKLTARLNE 307 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 YA +L P+ A + S +G T R Q D IARSHHGSVSKEQR E ALK+G Sbjct: 308 RYARQLGEQPTEPEAAFGYGSFTGGTEKRAQLPDNLIARSHHGSVSKEQRLEIENALKAG 367 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELRCVVATSSLELGIDMG +DLVIQV PLSVAS LQR+GRAGHQVGG KG+F+PRTRR Sbjct: 368 ELRCVVATSSLELGIDMGDIDLVIQVGAPLSVASALQRVGRAGHQVGGTPKGIFWPRTRR 427 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 DL+D+AV VE M AG L+ + PPHNPLDVLAQ TVAAAAM+ LQVD+W++ VRRA P++ Sbjct: 428 DLLDTAVTVEAMLAGELDAIAPPHNPLDVLAQHTVAAAAMETLQVDDWFALVRRADPFRA 487 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 LPR F+A LDMLSGRYP+ +F+ RP+++W+R L+ RPGAQ LAVTSGGTIPDRGM Sbjct: 488 LPRAAFEAVLDMLSGRYPADEFANLRPRIIWDRHNHTLSGRPGAQHLAVTSGGTIPDRGM 547 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 +SV+LPEGEE+ G+RRVGELDEEMVYESRVNDIITLGATSWRIQQIT DQV+V PAPGRS Sbjct: 548 FSVMLPEGEEQTGARRVGELDEEMVYESRVNDIITLGATSWRIQQITHDQVVVVPAPGRS 607 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 ARLPFW GEG GR A LGE IG FL + GA + T+ +E+ NIQ LI EQ Sbjct: 608 ARLPFWHGEGVGRSAALGEAIGRFLREVDQGAPLTDTL-----DEHARHNIQTLIAEQHQ 662 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 ATG++P R L++ERCRDE GDWR+ILHSPYG+RVH PWA+A+A RI + G D +VVAS Sbjct: 663 ATGVLPTDRALLIERCRDETGDWRVILHSPYGQRVHAPWALAVADRIARVMGIDPAVVAS 722 Query: 735 DDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRT 794 DDGIVAR PD+DG++P A +FLF P++L ++V AVG SALFAARFRECAARALL+P R Sbjct: 723 DDGIVARFPDSDGRVPGAELFLFAPDELQRVVNHAVGQSALFAARFRECAARALLLPRRN 782 Query: 795 PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 PG R+PLWQQRLRA QLLE+A+ + DFP+++ET RECLQDVYDLPAL RLM RL GEIQ Sbjct: 783 PGQRSPLWQQRLRAGQLLEVARQFDDFPILIETARECLQDVYDLPALHRLMARLQRGEIQ 842 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 ++DVTT +PSPFA LLFGYVAEFMY SDAP AERRAS+L+LDS+LL+ LLG+VD ELL Sbjct: 843 LADVTTESPSPFAAPLLFGYVAEFMYASDAPQAERRASMLALDSKLLKRLLGEVDMRELL 902 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL 974 D ++ +VE+ELQRL G A E L DLLRE+GP+T +LA R++G + +A L+ L Sbjct: 903 DTTLVARVEQELQRLPAGYHATSIEALSDLLREVGPLTDAELALRYSGDA-PLAEGLQAL 961 Query: 975 LAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRA 1034 +RIF I+ Q+R A +DA+RLRDALG +P++LP L V+ PL DL RY R Sbjct: 962 QLAQRIFSVRIADQQRWALAEDASRLRDALGCHVPDTLPPALLQPVTRPLYDLLHRYART 1021 Query: 1035 HALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM-------NLQQDIWVSDEVFRRLRLR 1087 HAL TA +LAH F LG+A+V + L +LR+QG V+ + ++ WV++ VFRRLRLR Sbjct: 1022 HALFTASELAHHFGLGVAVVADALGELRQQGKVIKGDFTPSDDEEPQWVAENVFRRLRLR 1081 Query: 1088 SLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLA 1147 SLQAAR+AT+PV Y LLLERQGV+ +D S A + G + GV+GV+RVIEQLA Sbjct: 1082 SLQAARDATKPVDPAVYVALLLERQGVV--SDAS----ARQTQGAFSGVNGVVRVIEQLA 1135 Query: 1148 GVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAE 1207 G+ LPA+LWE+ ILP RVRDY MLDELL++G V+W GQ+ G +GLV+LHL EYAAE Sbjct: 1136 GIALPAALWETHILPVRVRDYQPAMLDELLSSGEVVWHGQRAPGAAEGLVSLHLSEYAAE 1195 Query: 1208 SFTPA-EADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALV 1266 + PA E + LQ I+ +L DG WF +Q+ R+ +S D + + +A+W L Sbjct: 1196 TLPPADEGKTIALTPLQHQILTLLQDGSGWFVRQLIPRLAQ---DSPDPALIYQAMWDLA 1252 Query: 1267 WQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSY-NTPNLAGRW 1325 W+G +T+D W+ LR++T ++ R R R RRG YA P S S ++AGRW Sbjct: 1253 WRGYLTTDTWSALRSVTGHVNSPRPRPARPSRHRRGHAGYAAPASRIASGPGLTSMAGRW 1312 Query: 1326 SLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMR 1385 SLL + DTER LAL ENMLDR+ ++SR A IAE +PGGFP++Q + R +EDSGR++R Sbjct: 1313 SLLARSAIADTERALALTENMLDRFAVVSRGAAIAEQVPGGFPALQPVLRGLEDSGRVLR 1372 Query: 1386 GRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPAT 1445 GRFV G+G AQFA+ IDRLR LA+ T +PVAL+ DPAN +G LPWP A Sbjct: 1373 GRFVAGMGAAQFADHTVIDRLRQLASHQRLT--GSPVALAVLDPANPFGVQLPWPLSLAG 1430 Query: 1446 LVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE-VFHALTTALRREPRLRF 1504 PTRR GALVV+ G++LLYL QGGK+++ + L AL AL+RE L F Sbjct: 1431 NRPTRRHGALVVIGHGRVLLYLPQGGKELMTFASAATLDEQHAAVLALGAALKREKHLSF 1490 Query: 1505 TLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 TL V+D P Q+P+ L+EAGFS P+G W Sbjct: 1491 TLERVDDQPAGQSPLLAALKEAGFSRVPRGYSW 1523 >UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Corynebacterineae RepID=D0L8P3_GORB4 Length = 1544 Score = 1320 bits (3416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/1561 (48%), Positives = 978/1561 (62%), Gaps = 75/1561 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ TR WF AF PT Q W+ A E+ LVIAPTGSGKTL+AFL+ALDRL Sbjct: 11 FTAPTRRWFTGAFTAPTPAQVGAWNSIADGENTLVIAPTGSGKTLSAFLWALDRL----- 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +R+LYISP+KAL DV+RNL+ PL GI + GE E N+ VG+R+GD Sbjct: 66 --AATPDRAAGTRVLYISPLKALAVDVERNLRAPLTGITRAAQELGEPEPNITVGLRSGD 123 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T A R L + PPDILITTPESLYLMLTS RETLR V+ VI+DEVHAVAG+KRG HLA Sbjct: 124 TAAAARRLLAKAPPDILITTPESLYLMLTSSVRETLRTVDAVIVDEVHAVAGTKRGTHLA 183 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL T AQRIGLSATVR VA FL G RP VV PPA + +R+ VPV + Sbjct: 184 LSLERLDDLLETPAQRIGLSATVRPPEVVADFLAGSRPCRVVRPPAAKTFDLRVDVPVPD 243 Query: 255 MDDVSSVASGTGED---SHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 M ++ A T +D + + GS+WP++E I+D + +R+TIVF NSR LAE+LTAR Sbjct: 244 MANIPPPAEDTADDLDDAFSPTAGSLWPHVEASIVDAIEANRATIVFANSRRLAERLTAR 303 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSD------VFIARSHHGSVSKEQRA 365 LNE+YA QRS + V AA G + +S +AR+HHGSVSKEQRA Sbjct: 304 LNEIYA---QRS-GVPVQAAANPGVPGGAPAHIMASGAAGGAPTTLARAHHGSVSKEQRA 359 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E LKSG LRCVVATSSLELGIDMGAVDLVIQV P SVASGLQRIGRAGHQVG +S+ Sbjct: 360 EIEDDLKSGRLRCVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGEISQ 419 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 G+ +P+ R DLV V VE M AG +E L P NPLDVLAQ T+AAAAMD L VD+W+ Sbjct: 420 GVLYPKHRTDLVHCTVAVERMRAGAIEELRIPKNPLDVLAQHTIAAAAMDDLDVDQWFDV 479 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 +RRAAP+++L R V+ +TLD++SGR+PS +F+ RP++ W+R+ L R GAQ LAVTS Sbjct: 480 IRRAAPYRELAREVYVSTLDLISGRFPSDEFAELRPRVTWDRDANTLVGRRGAQRLAVTS 539 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 GGTIPDRG++ V + GE+ A RVGELDEEMVYESRV D+ LGATSWRI+ IT D+V Sbjct: 540 GGTIPDRGLFGVFM-VGEKSA---RVGELDEEMVYESRVGDVFALGATSWRIEDITHDRV 595 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANI 665 +VTPA G+ RLPFW G+ GRPAELG IG F +AD E N+ Sbjct: 596 LVTPAFGQPGRLPFWVGDAVGRPAELGAAIGKFTGAIADPQELDRQATELGLTEYARDNL 655 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 LI EQR ATG +P R LV+ER RDE+GDWR+ILHSPYG RVH PWA AI+ R+ Sbjct: 656 AALIAEQREATGHLPTDRTLVIERFRDELGDWRVILHSPYGLRVHAPWASAISARLQETL 715 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G + ASDDGI+ R+PDT+ + P AA+F+ +P+ + Q+V +A+ S++FA+RFRECAA Sbjct: 716 GLAGATTASDDGIIVRLPDTEDEPPGAAVFVIDPDDIEQMVTDALAESSMFASRFRECAA 775 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RALL+P R PG R PLWQQR R++QLL +A +PDFP++LE +RECLQDVYDLPAL L+ Sbjct: 776 RALLLPRRDPGRRAPLWQQRQRSAQLLSVASQFPDFPIVLEAVRECLQDVYDLPALTDLL 835 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 RR++ +++ + T PSPFA SLLFGYV FMY DAPLAERRA+ LSLD+ LL LL Sbjct: 836 RRISTRRVRLVETETPEPSPFAASLLFGYVGAFMYSDDAPLAERRAAALSLDTSLLAQLL 895 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE 965 G+VD ELLDP VI V LQRL P R+A+ E + DLLR LGP+T E++A R+ G + Sbjct: 896 GRVDLRELLDPGVIAAVIARLQRLDPSRQARDAEDIVDLLRWLGPLTTEEVAARYQG--D 953 Query: 966 EVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLR 1025 + A+ L +L I G+ A ++D ARLRDALGV P +P Y V P+ Sbjct: 954 DAAAVLADLHRAGPIISVTHQGRPLWAAVEDTARLRDALGVPAPLGVPAAYTDPVPDPVT 1013 Query: 1026 DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-----------QDI 1074 DL RY R H T + A + +A+V + L +L Q V+ Sbjct: 1014 DLVHRYARTHGPFTLTEAAESLGMAVAVVRDTLVRLAAQRKVVEGDFLPAAADDAHPTTQ 1073 Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W +V ++R SL A+R PV A T R L V PA S Sbjct: 1074 WCHADVLGQIRRGSLAASRADVAPVDAATLGRFLGGWHHVTPAERLS------------- 1120 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 GVDGV V++QLAG LPAS WES ILPARV DYS MLDELL++G V+WSG ++G D Sbjct: 1121 GVDGVATVLDQLAGYPLPASAWESLILPARVADYSPAMLDELLSSGEVVWSGHGRIGGAD 1180 Query: 1195 GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKI---GE 1251 G +A H + + P D+ + +A+ A++AVL GGA Q++ + + G Sbjct: 1181 GQIAFHPADLLPVTLEP--PDEIDLTAIHAALLAVLTPGGALRFAQLTDAASETLSAAGA 1238 Query: 1252 SVDLSA-LQEALWALVWQGVITSDIWAPLRALTRSS--SNARTSTRRSHRARRGRP---- 1304 +V +A ++ ALW LVW G + +D +A +RAL R S R + R A RGR Sbjct: 1239 AVPSTADIESALWDLVWAGQVANDSFAAVRALLRPDRRSVGRGAGSRPTPAHRGRARAPR 1298 Query: 1305 VYAQPVSPRV-------SYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQA 1357 + Q +S R ++P GRW LL + L+ T AL E +L RYG+++R + Sbjct: 1299 IRPQRLSTRFLSEHATGRPSSPTTTGRWFLLARDDLDPTAATQALCEQLLVRYGVVTRGS 1358 Query: 1358 VIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTR 1417 V E +PGGF + EDSG + RG +V+GLGGAQFA T+D LR A A Sbjct: 1359 VATEGVPGGFARVYKALSVFEDSGVVRRGYYVDGLGGAQFARPTTVDELRRHAVDADSA- 1417 Query: 1418 HYTPVALSANDPANVWGNLLPWP---AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKM 1474 V L+A DPAN +G +L WP A + P R+AGALVV+ G+ +L++ +GGK + Sbjct: 1418 -APAVVLAATDPANPYGAVLDWPETSAEDSGHRPGRKAGALVVLLAGEPVLFVERGGKTV 1476 Query: 1475 LVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQG 1534 L + + L AL A+R R T+ +V+ PV + M +L +AGF+++P+G Sbjct: 1477 LTFSSDADRLR-TAAGALADAVRAGRLSRLTIDQVDSRPVLGSEMAPVLVDAGFATTPRG 1535 Query: 1535 L 1535 + Sbjct: 1536 V 1536 >UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJH4_EGGLE Length = 1741 Score = 1307 bits (3382), Expect = 0.0, Method: Compositional matrix adjust. Identities = 789/1715 (46%), Positives = 1006/1715 (58%), Gaps = 198/1715 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A P P +L FS R WFL AF +PT +Q + W V E+ALVIAPTGSGKTLAA Sbjct: 37 AREPTPHALT--RFSDEVRGWFLDAFPEPTPLQERAWDVIEGGENALVIAPTGSGKTLAA 94 Query: 62 FLYALDRLFREGGEDT---REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 FL+A+D L RE ++ K R+LYISP+KALG DV+RNLQ PL GIA Sbjct: 95 FLFAIDELMREKAATAGLPKKERPGKGVRVLYISPLKALGADVERNLQAPLAGIAARMAA 154 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVII 178 G +R G+RTGDT +R L RNPPDILITTPESLYLMLTS+ARETLR VETVI+ Sbjct: 155 AGGAMPEVRTGMRTGDTTPDQRRSLQRNPPDILITTPESLYLMLTSQARETLRTVETVIV 214 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 DEVHA+AGSKRGAHLALSLERLD LL AQRIGLSATVR ++A FLGG PV VV Sbjct: 215 DEVHALAGSKRGAHLALSLERLDDLLEKPAQRIGLSATVRPRDEIARFLGGPHPVRVVAS 274 Query: 239 PAMRHPQIRIVVPVANMDDVSSV------------------------------------- 261 +R+ VPV +M V + Sbjct: 275 EGRPDMDVRVRVPVRDMTAVPTFGGSDLTGGGAGKRGGGPRLAPAEEAWKSDRALRAAMA 334 Query: 262 -----ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 AS T DS G SIWPYIE ILDEVL HR+TIVF NSRGL EKLTARLN+LY Sbjct: 335 KSSLPASTTSPDSRLG-SSSIWPYIEASILDEVLAHRTTIVFVNSRGLCEKLTARLNDLY 393 Query: 317 AARLQRSPSIAVDAAH--FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 A R+ + + +DAA S G+T++ + IA++HHGSVSKE+R E+ LK+G Sbjct: 394 AKRMGIARGVDMDAAAAPIRSDLGSTADMSTGAPAVIAKAHHGSVSKEKRLQVERELKAG 453 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 EL CVVATSSLELGIDMG++DLV+QVA P SVAS LQRIGRA HQVGG S G FPRTR Sbjct: 454 ELPCVVATSSLELGIDMGSIDLVLQVAAPPSVASALQRIGRANHQVGGRSTGSIFPRTRT 513 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 +++D+AV E M+ GR+E N LDVLAQQTVAA AMD L D+W+ VRRAAP+ + Sbjct: 514 EIIDAAVAAEGMYEGRIEQTAFVKNALDVLAQQTVAAVAMDELAADDWFDTVRRAAPYSE 573 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 LPRR FD+ L ML+GRY + D + F P++VW+RE G L ARPG Q AV S GTIPDRGM Sbjct: 574 LPRRAFDSVLGMLAGRYATADLAEFSPRIVWDRERGRLLARPGTQRQAVMSAGTIPDRGM 633 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 +SV+LPEG+ G RRVGELDEEMVYESRV DIITLG +SWRI +ITRD+VIV PAPGRS Sbjct: 634 FSVVLPEGDGAQGRRRVGELDEEMVYESRVGDIITLGTSSWRISEITRDRVIVEPAPGRS 693 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLA-----------DGAF-FSGTIPPWLA----E 658 ARLPFW GEG GRPAE G M G FL +A +G F S + LA + Sbjct: 694 ARLPFWHGEGVGRPAETGRMRGAFLRAVAAGIEGDDAEAEEGGFGVSCAVSERLAADGLD 753 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 ++ N+ LI QR ATGI+P + LV+ERC DE GDWR++LHSPYGRRVHEPWA+A++ Sbjct: 754 DDAQRNLVELIRSQRAATGIIPDDKTLVVERCEDEQGDWRVLLHSPYGRRVHEPWAMAVS 813 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 RI A++G DA +A+DDGIV RIP T+ +LP +F F+P++L +I R+ VGS++LF+A Sbjct: 814 DRIMAIYGYDAQAMAADDGIVLRIPMTETRLPGIELFAFDPDELDRIARDRVGSTSLFSA 873 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RFRECAARALLM PG R PLWQQRL+A QLLE A+ +FP+++ET RECLQDVYD+ Sbjct: 874 RFRECAARALLMSPIAPGKRAPLWQQRLKAGQLLEAARREREFPILVETARECLQDVYDM 933 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 AL LM ++ G +++ + T+ PSPFA LLFGYV E +Y D P AE+RAS+LSLD Sbjct: 934 RALHELMEQVQAGSVRLVEAQTSVPSPFAAPLLFGYVGEHLYAGDLPHAEQRASLLSLDP 993 Query: 899 ELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQ 958 LL LLG D G++LD VI VE LQRLAP RR +G EG DLLR LGP++VE+ A Sbjct: 994 TLLGELLGSTDLGDVLDADVIAGVEAGLQRLAPDRRMRGIEGAADLLRVLGPLSVEEAAL 1053 Query: 959 RHTGSSEEVASYLENLLA------------------VKRIFPAMISGQERLACMDDAARL 1000 R +E + R F ++ G+E A +DDAA L Sbjct: 1054 RMRSDAEADDDGAADEGGGEAATEEEAHALLEELQRAHRAFTVVLGGKELWAAVDDAAFL 1113 Query: 1001 RDALGVRLP-------------------------ESLPEIYLHRVS-----------YPL 1024 RDALG +P + EI R + +PL Sbjct: 1114 RDALGATIPPWADALNRPASQSGQAQAPLRDPERSAQREIEGSRAASAESDGGEDALHPL 1173 Query: 1025 RDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN--LQQD------IWV 1076 +L RY R H +AE A F +G+A+ + L +L G +M +D WV Sbjct: 1174 DELLARYARTHGPFSAEAAAARFGIGVAVARDGLARLTSAGRLMQGRFGEDGDGRACAWV 1233 Query: 1077 SDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGV 1136 VFRRLR SL AR A + V+ + +AR L++ QG P + +EG+ Sbjct: 1234 ETGVFRRLRSLSLAEARRAVQAVSPSAFARFLIDLQGAGPLGEER-----------FEGI 1282 Query: 1137 DGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD-- 1194 DG+ +VI Q GV LPAS WE+ + P+RVRDY MLDELLA+G V+W+G ++ G++ Sbjct: 1283 DGLAQVIAQFEGVFLPASAWEAHVFPSRVRDYRPGMLDELLASGDVVWAGARREGDEGDG 1342 Query: 1195 ----------------GLVALHLQEYAAESFTPAEADQAN------------RSALQQAI 1226 GLVA + + F P D A+ +++ + Sbjct: 1343 RERALRPGSSREREAAGLVAFYPTD---SPFAPVRPDLADAPSDGPKLEGSAAPSVEATV 1399 Query: 1227 VAVLADGGAWFAQQISQRIRDKIG-ESVDLSALQEALWALVWQGVITSDIWAPLRALTRS 1285 V L GG F +QI +R ++ E VD + + + L+W G T+D +AP+RA Sbjct: 1400 VEALGFGGGLFFRQIVDAVRRRLAPEFVDEAVVASTMRELMWDGRATNDTYAPVRASLEG 1459 Query: 1286 SSNA--RTSTRRSHRARRGRPVYAQPVSPRV-------SYNTPNLAGRWSLLQVEPLNDT 1336 + A + + R R SP + + L GRWSL+ P NDT Sbjct: 1460 AGAAAGKPRSAPRRRVSSRRSAMRTVDSPTMRGIASAQAAVGAALTGRWSLIMPSPENDT 1519 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 R +AL E++LDRYG++SR V +PGG ++ + R MED G ++RG FV+GLG AQ Sbjct: 1520 VRAIALVESILDRYGVLSRDVVQLSGVPGGLGALLPVLRQMEDVGDVLRGAFVQGLGPAQ 1579 Query: 1397 FAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP---------AHPATLV 1447 FA R TID LR + PV L+A+DPA ++G LPWP A Sbjct: 1580 FAARETIDVLRTYEAGDGEADPREPVVLAADDPACLYGAGLPWPPVARADAEGAEEHEAR 1639 Query: 1448 PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL---TTALRRE----P 1500 PTRRAG+LVVV GG LY A G + +L + + + LA + +LRR Sbjct: 1640 PTRRAGSLVVVLGGVPALYAAAGLRSLLSFTDDGDALARAARALVAHEKRSLRRAGAEGA 1699 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 R + + +N + +P+ +L++AG P G+ Sbjct: 1700 RKKVVVETLNGRSILDSPLAEVLQDAGLVRLPDGM 1734 >UniRef50_Q5Z170 Putative ATP-dependent DNA helicase n=3 Tax=Corynebacterineae RepID=Q5Z170_NOCFA Length = 1584 Score = 1296 bits (3354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 761/1618 (47%), Positives = 985/1618 (60%), Gaps = 146/1618 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 VFS AT++WF AF PT+ Q W A EH LV+APTGSGKTL+AFL+A+D L Sbjct: 8 VFSRATQEWFDGAFPAPTSAQLGAWQAIAAGEHTLVVAPTGSGKTLSAFLWAIDEL---- 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + + + +LYISP+KAL DV+RNL+ PL GI +R G + VG+R+G Sbjct: 64 AATAPDPDAPRGTTVLYISPLKALAVDVERNLRAPLVGITQTAKRLGLDPPEITVGVRSG 123 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTPA R + R PPDILITTPESL+LMLTS ARETLR V TVI+DEVHA+AGSKRGAHL Sbjct: 124 DTPAAARRSMQRTPPDILITTPESLFLMLTSAARETLRTVRTVIVDEVHAIAGSKRGAHL 183 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSL RLD L QRIGLSATVR A +V FL G P+T+V+PPA + + + VPV Sbjct: 184 ALSLARLDMLTERPVQRIGLSATVRPAEEVGRFLVGAAPITIVSPPAPKTFDLTVRVPVP 243 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 +M E + + GSIWP+++ I+D VL HRS+IVF NSR LAE+LTARLN Sbjct: 244 DMT----------EPGESDQPGSIWPHVDEAIVDLVLAHRSSIVFANSRRLAERLTARLN 293 Query: 314 ELYAARLQRSPSIAVDAAHFESTS-GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 E YAAR+ V +H G ++ + ++ +AR+HHGSVSKEQRA+ E LK Sbjct: 294 EAYAARVGDP----VSTSHAPPAQLGPSTEVIHGAEQLLARAHHGSVSKEQRALIEDDLK 349 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 SG LRCVVATSSLELGIDMGAVDLV+QV P SVASGLQRIGRAGHQVG +S+G+ FP+ Sbjct: 350 SGRLRCVVATSSLELGIDMGAVDLVVQVEAPPSVASGLQRIGRAGHQVGEISRGVLFPKH 409 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 R D++ AV E M GR+E L P +PLD+LAQQTVA A++ + VD W+ VR + Sbjct: 410 RTDVIHCAVAAERMVTGRIEALRIPAHPLDILAQQTVAVCALEPIDVDAWFDAVRATGSF 469 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 LPR +++ LD+LSGRYPS +F+ RP+LVW+R+ G LT RPGAQ LAVTSGG IPDR Sbjct: 470 ATLPRSAYESVLDLLSGRYPSDEFAELRPRLVWDRDAGTLTGRPGAQRLAVTSGGAIPDR 529 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 GM++V + GE+ RVGELDEEMVYESRV D+ LGATSWRI++IT D+V+VTPA G Sbjct: 530 GMFAVYM-VGEKNT---RVGELDEEMVYESRVGDVFALGATSWRIEEITFDRVLVTPAFG 585 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHLLA-------DGA---FFSGTIPPWLAEENTI 662 + RLPFW G+G GRPAELG +G+F+ A D A G + + N Sbjct: 586 QPGRLPFWHGDGLGRPAELGAALGEFVRKAAKQTANRADAAADTDLGGLLAGAGLDANAA 645 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 N+ L+++QR ATG +P + LV+ER RDE+GDWR++LHSP+G VH PWA+A+ R+ Sbjct: 646 TNLVALLDDQRAATGQLPTDKTLVVERFRDELGDWRLVLHSPFGLPVHAPWALAVGARLR 705 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 +G DA+ ASDDGIV R+PDT P A +F+FEP+++ +V E VG SALFA+RFRE Sbjct: 706 ERFGVDAAPNASDDGIVVRLPDTTDDPPGAELFVFEPDEIDDLVTEQVGGSALFASRFRE 765 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 CAARALL+P R PG R PLWQQR R++QLL++A+ +PDFP++LET+RECL+DVYDLPAL Sbjct: 766 CAARALLLPRRDPGKRAPLWQQRQRSAQLLDVARKFPDFPILLETVRECLRDVYDLPALR 825 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 L+ R+ ++++ +V T TPSPFA +LLF Y+ +FMY+ D+PLAERRA+ LSLDS LL Sbjct: 826 DLLGRVARRQVRLVEVETATPSPFANALLFDYIGQFMYEGDSPLAERRAAALSLDSGLLA 885 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHT- 961 LLG+V+ ELLD V+ Q E ELQRL P RRA+ EGL DLLR LGP+T E+ QR Sbjct: 886 ELLGRVELRELLDTAVLEQTERELQRLTPERRARDAEGLADLLRLLGPLTPEEAGQRCVR 945 Query: 962 GSSEEVAS-----------------------------------------------YLENL 974 G ++EVA + L Sbjct: 946 GRADEVADTGLPEADPSVAAAATRSADGAPDGSMAGAEPEPSEFPADDGTGPHHRWFAEL 1005 Query: 975 LAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRA 1034 +A +R +G+ A ++DA+RLRDALGV LP P ++ V+ PL DL RY R Sbjct: 1006 VAARRALEVSFAGRTWWAAVEDASRLRDALGVPLPIGTPAAFIEPVADPLGDLVGRYART 1065 Query: 1035 HALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDI------WVSDEVFRRLRLRS 1088 HA + +A F +G A+ L +L + V+ + W +V RRLR RS Sbjct: 1066 HAPFGLDAVARRFGIGPAVAATALHRLVTEKRVVEGEFTPGASGREWCDTQVLRRLRRRS 1125 Query: 1089 LQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAG 1148 L AAR PVA + R L Q V G GVDGV V+EQLAG Sbjct: 1126 LAAARHEVEPVATAAFGRFLPAWQHV--------------GTGELRGVDGVATVVEQLAG 1171 Query: 1149 VGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAES 1208 V PAS WES ILPARVRDY+ MLDEL ATG VIWSG + DG +ALHL E A + Sbjct: 1172 VPAPASAWESLILPARVRDYTPAMLDELTATGEVIWSGHGAITAKDGWIALHLAEQAPFT 1231 Query: 1209 FTPAEADQANRSALQ------------------QAIVAVLADGGAWFAQQISQRIRDKIG 1250 P + + + + L+ + VL GGA+F +Q+S D G Sbjct: 1232 LPPPDDIELSETHLRLLAALGATPAPRAGADGPVPLPPVLHGGGAYFFRQLS----DATG 1287 Query: 1251 ESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPV 1310 +D +A+ ALW LVW G++ D +AP+RAL ++ T+ R RA RGR +P Sbjct: 1288 -LLDDTAVAAALWELVWAGLVAGDTFAPVRALLSGTARTTTAHRTPRRAPRGRAYLPRPS 1346 Query: 1311 SPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSM 1370 P P +AGRWSLL ++T R A A+ +L+RYG+++R +V E +PGGF M Sbjct: 1347 LP-TRTGPPAVAGRWSLLPERVTDNTVRAHATADILLERYGVLTRGSVQNEGVPGGFALM 1405 Query: 1371 QTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP----VALSA 1426 + ED GR RG FV+ LGGAQF+ +DRLR T + P + L+A Sbjct: 1406 YRVLTEFEDRGRCRRGYFVDSLGGAQFSTTDVVDRLRSHDTDRGRPGDRAPAPSGLVLAA 1465 Query: 1427 NDPANVWGNLLPWPAHPAT--LVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELL 1484 DPAN +G LPWP + P R+AGALVV+ GG+L+LYL +GGK +L + Sbjct: 1466 CDPANPYGAALPWPKNEGEGGHRPGRKAGALVVLVGGELVLYLERGGKTLLTFTTDPTAR 1525 Query: 1485 APE-------VFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 VFH AL + ++ V L +AGF+ +P+GL Sbjct: 1526 RAAATALAEVVFHGRVDAL--------VIDRIDGETVHGNTFAAFLTDAGFADTPRGL 1575 >UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomycetales RepID=Q2J762_FRASC Length = 1567 Score = 1276 bits (3303), Expect = 0.0, Method: Compositional matrix adjust. Identities = 764/1587 (48%), Positives = 966/1587 (60%), Gaps = 109/1587 (6%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 D PDP + FS TR WF AF T Q W +ALV+APTGSGKTLAAF Sbjct: 25 DPPDPLT----AFSAPTRSWFGAAFTAATPAQRGAWEAIRTGGNALVVAPTGSGKTLAAF 80 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L++LD L R A + R+LY+SP+KAL DV+RNL+ PL GI +R G Sbjct: 81 LWSLDTLARS----APPAEPTRRCRVLYVSPLKALAVDVERNLRAPLAGIRSAAQRLGLP 136 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVH 182 + ++ VG+R+GDTPA ER PPD+LITTPESL+L+LTS ARE+LRGV TVI+DEVH Sbjct: 137 QPDVTVGLRSGDTPAAERRGFGTRPPDVLITTPESLFLILTSAARESLRGVRTVIVDEVH 196 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 AVAG+KRGAHLALSLERLDALL T AQRIGLSATVR + A FLGG PV VV PPA + Sbjct: 197 AVAGTKRGAHLALSLERLDALLDTPAQRIGLSATVRPVEEAARFLGGTAPVAVVRPPAAK 256 Query: 243 HPQIRIVVPVANMDDVSSV---ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 QI +VVPV +M + S G + A SIWP +E +LD VL H ++IVF Sbjct: 257 TLQIDVVVPVEDMTQLGGQLLDGSPDGSAASAPHRASIWPAVEQRVLDLVLAHSASIVFA 316 Query: 300 NSRGLAEKLTARLNELYAARLQR----SPSIAVDA---------AHFESTSGATSNRVQS 346 NSR LAE+L ARLNELYA RL S+A D A SG Sbjct: 317 NSRRLAERLCARLNELYAERLAAATAADESVAGDGPGEAGRTSPAALMGASGQGGGTAGW 376 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 + IAR+HHGSVS+EQRA E+ LK+G L VVATSSLELGIDMGAVDLV+Q+ +P SV Sbjct: 377 PE--IARAHHGSVSREQRAGIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQIGSPPSV 434 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 A+G+QR GRAGHQVG S+G+ P+ R DL++ AV+ E M +G +E L P NPLDVLAQ Sbjct: 435 AAGMQRTGRAGHQVGAASRGVIIPKHRSDLLECAVVAERMRSGAIERLRYPRNPLDVLAQ 494 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 Q VA AM+ VDE + VRR A + LP F+A LDML+GRYPS F+ RP++ W+ Sbjct: 495 QIVAMTAMEDWHVDELGALVRRTATFATLPTSAFEAVLDMLAGRYPSDTFAELRPRITWD 554 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVND 586 R TGILTARPGAQ LAVTSGGTIPDRGM+ V L GE S RVGELDEEMVYESRV D Sbjct: 555 RVTGILTARPGAQRLAVTSGGTIPDRGMFGVFL-VGER---SSRVGELDEEMVYESRVGD 610 Query: 587 IITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL---- 642 ++ LG++SWRI++IT D+V+VTPAPGR RLPFW G+ GRPAELG +G FL + Sbjct: 611 VVLLGSSSWRIEEITADRVLVTPAPGRPGRLPFWHGDAPGRPAELGRALGAFLREITRLP 670 Query: 643 ----ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 AD +G ++ AN+ ++EQ+ A G + R +V+ER RDEIGDWR Sbjct: 671 AQAAADRVRAAGL------DDRATANLLRYLDEQKAAVGRLHDDRTIVVERFRDEIGDWR 724 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE 758 + +HSP+G V+ PWA+A+ R+ +G D ++ +DDGIVARIPD + P A + LFE Sbjct: 725 LAVHSPFGAPVNAPWALALGARLRERYGVDVQIMHTDDGIVARIPDA-AEPPGADLALFE 783 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 P+++ IVR +GSSALFA+RFRECA RALL+P RTPG RTPLWQQR R++ LL +A + Sbjct: 784 PDEIDAIVRAEIGSSALFASRFRECAGRALLLPRRTPGRRTPLWQQRQRSAALLSVAATF 843 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 FPV+LET+RECLQDV+D+PAL LMR ++ +++ +V T +PSPFA++LLFGYVA F Sbjct: 844 ASFPVVLETMRECLQDVFDVPALAELMREVSARTLRVVEVETPSPSPFASALLFGYVAAF 903 Query: 879 MYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE 938 MY D PLAERRA VLSLDS LL LLG+ D EL+DP + QV +L RLAP R A+ Sbjct: 904 MYDGDVPLAERRAQVLSLDSSLLAELLGEADLRELIDPAALAQVAAQLTRLAPDRHARDV 963 Query: 939 EGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAA 998 EG+ DLLR LG +T E+ R +L L +R I+G+ER ++DA Sbjct: 964 EGVADLLRMLGDLTTEEAVARGA-----TPGWLAELEQTRRALRVRIAGEERWVAIEDAG 1018 Query: 999 RLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL 1058 RLRDALGV LP +P+ + V PL DL RY R H E+ A LG A+V L Sbjct: 1019 RLRDALGVPLPVGVPDAFTEPVRDPLGDLISRYARTHGPFDTEEPAARLGLGTAVVAGVL 1078 Query: 1059 QQLREQGLVM--NLQQD----IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQ 1112 L G ++ L D W V R LR RSL A R+ V T Sbjct: 1079 DGLVRSGRLVRGELHPDRGGEQWCDAGVLRALRRRSLAALRKEVEAVPPRTLG------- 1131 Query: 1113 GVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEM 1172 LPA + S + G GVDGV+R +EQL G +PAS WE +LPARV DYS M Sbjct: 1132 AFLPA-------WQSVTSGRGRGVDGVLRAVEQLQGALIPASAWEQLVLPARVADYSPTM 1184 Query: 1173 LDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLAD 1232 LDEL + G V W+G L DDG + L L + A P + + A+ L AI+ L Sbjct: 1185 LDELCSAGEVHWAGAGGLPGDDGWLTLVLADTAPLLLPPPDPEIAS-GPLHTAILDALTG 1243 Query: 1233 GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS 1292 G A F + +S R+ S+D +AL ALW LVW G +T+D APLRAL S+ Sbjct: 1244 GAALFFRALSDRM-----GSLDDTALATALWDLVWAGRVTNDTLAPLRALLGSAG----- 1293 Query: 1293 TRRSHRARRGRPV-YAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYG 1351 R +RA R R Y +P PR + P AGRWSLL + T R ALAE +L+R+G Sbjct: 1294 --RPYRAPRPRAARYGRPAMPRRA-GPPTAAGRWSLLPERDTDPTRRAHALAEALLERHG 1350 Query: 1352 IISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL-- 1409 I++R AV E PGGF + + + ED+GR RG FVE LG AQFA +DRLR + Sbjct: 1351 IVTRGAVTGERHPGGFAGVYRVLSAFEDAGRARRGYFVESLGAAQFAVPGAVDRLRSIAA 1410 Query: 1410 --------------ATQATQTRHYTPVALSANDPANVWGNLLPWPAHP-------ATLVP 1448 A + V L+A DPAN +G LPWP P A P Sbjct: 1411 AQRDAEAAPAWAQPAAGPPSSSSAQAVVLAAADPANPFGAALPWPTRPGDDADGAAGHRP 1470 Query: 1449 TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTE 1508 R+AGA+VV+ G+L+LY+ +GG+ +L W E + +AP V AL A+R R T+ + Sbjct: 1471 GRKAGAMVVIIDGELILYVERGGRSLLSWTEDDHRVAPAV-EALARAVRDGLLGRLTVEK 1529 Query: 1509 VNDLPVRQTPMFTLLREAGFSSSPQGL 1535 + + + + L AGF +P+GL Sbjct: 1530 ADGQTIVGSTLGAALERAGFHPTPRGL 1556 >UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinomycetales RepID=A0JSK2_ARTS2 Length = 1694 Score = 1263 bits (3268), Expect = 0.0, Method: Compositional matrix adjust. Identities = 765/1685 (45%), Positives = 1002/1685 (59%), Gaps = 187/1685 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D FS ATR+WFL AF PT Q W+ + HALV+APTGSGKTLAAFL+ALDRL Sbjct: 31 DRFSQATREWFLGAFSAPTPAQNGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLQSS 90 Query: 73 ---------GGEDTREAHKRKT----SRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 G + + K KT +R+LYISP+KALG DV+RNL+ PL GI +R Sbjct: 91 APAEPEALPGLDPAAKGRKPKTPKRKTRVLYISPLKALGVDVERNLRAPLIGITQTAKRL 150 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIID 179 G + VG+R+GDT +R L +PPDILITTPESL+LMLTS+ARETL V+T+I+D Sbjct: 151 GLPAPLITVGVRSGDTTTADRRALLSHPPDILITTPESLFLMLTSKARETLSEVDTIIVD 210 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 EVHAVAG+KRGAHLA+SLERLDALL AQRIGLSATV VA FL G PV +V PP Sbjct: 211 EVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPRELVAQFLAGSAPVEIVAPP 270 Query: 240 AMRHPQIRIVVPVANMDDVSSVASG--TGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 + ++ + + VPV +M D+ A +G S + SIWP++E I+D V+ ++STIV Sbjct: 271 SKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIVDLVMANQSTIV 330 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVD-----AAHFES-------------TSGA 339 F NSR LAE+LTARLNE+YA R + S +D A FE TS A Sbjct: 331 FANSRRLAERLTARLNEIYAERQLMAASGGLDGSGAGAPDFEPAGAPAGGASAAVPTSTA 390 Query: 340 TSNRVQS-------SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG 392 T + + +D +AR+HHGSVSK+QRA+ E LKSG LRCVVATSSLELGIDMG Sbjct: 391 TPAHMMAQAGSTVGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVATSSLELGIDMG 450 Query: 393 AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE 452 AVDLV+QV +P SVASGLQR+GRAGHQVG VS+G+ FP+ R DLV + + VE M AG++E Sbjct: 451 AVDLVVQVESPPSVASGLQRVGRAGHQVGEVSQGVLFPKHRADLVHTTITVERMLAGKIE 510 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 L P NPLD+LAQQTVAA A+ ++ V+EW+S VRR+AP+ LPR F+ATLD+L+GRYP Sbjct: 511 RLYVPANPLDILAQQTVAATALGSIDVEEWFSTVRRSAPFASLPRSAFEATLDLLAGRYP 570 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR-- 570 S +F+ RP+++W+R G + RPGAQ LAVTSGGTIPDRG++ V + E + Sbjct: 571 SDEFAELRPRIIWDRNAGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIGTETEGTGSSGS 630 Query: 571 -----------------------VGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 VGELDEEMVYESRV D+ LGATSW+I+ IT D+V+V Sbjct: 631 PGSASGDGRAASPAAAAAKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVLV 690 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA-------EEN 660 +PA G+ +LPFW+G GRP +LG +G F+ L+ + + P + ++ Sbjct: 691 SPAFGQPGKLPFWKGASLGRPVDLGRALGAFVRELS-----ASDVGPAMERCKASGLDDF 745 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 N+ + EQ+ AT +VP LV+ER DE+GDWR++LHSP+G VH PWA+A+ R Sbjct: 746 AANNLIQYLAEQKLATEVVPSDTTLVVERFHDELGDWRVVLHSPFGMPVHAPWALAVGQR 805 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 +H +G D S +A+DDGIV R+P + + P A +FLF+PE+L QIV VG SALFA+RF Sbjct: 806 LHQRYGMDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASRF 865 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RECAARALL+P +TPG R PLWQQR R++QLL++A+ YP FP++LET+RECLQDVYDLPA Sbjct: 866 RECAARALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPA 925 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 L+ + + E++I TT PSPFA SLLFGYVA+F+Y+ D+PLAERRA+ L+LDS L Sbjct: 926 LKDIAASIERRELRILQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTL 985 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 L LLG+V+ ELLD +VI E ELQRLAP RR +G EG+ DLLR LGP+T ++A R Sbjct: 986 LNELLGRVELRELLDAKVIDATERELQRLAPDRRVRGMEGVADLLRLLGPLTPAEVAARL 1045 Query: 961 TGSSEEVASYLENLLAVKRIFP-----------------------AMISGQERLACMDDA 997 + VA + + P I G ER A ++DA Sbjct: 1046 EPAGPPVAEPAPGVEPAPVVEPVGTLVADAAAHLAALQRANRALRVNIGGVERFAAVEDA 1105 Query: 998 ARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQ 1057 ARLRDA+GV LP +P ++ V+ PL DL RY R H TA + A LG+A+V Sbjct: 1106 ARLRDAIGVPLPMGVPLAFIEPVADPLGDLVSRYARTHGPFTAAEAAARLGLGVAVVGTA 1165 Query: 1058 LQQLREQGLVMN-------------------LQQDI----------------WVSDEVFR 1082 L++L G V+ ++D W EV R Sbjct: 1166 LKRLAADGRVVEGEFRPHATPPRQVPETPEPGEEDAPALPSASTITLAGTSEWCDAEVLR 1225 Query: 1083 RLRLRSLQAAREATRPVAATTYARLLLERQGV-LPATDGSPALFASTSPGVYEGVDGVMR 1141 +LR RSL A R PV A+ Y R L Q V P G AL G+DG++ Sbjct: 1226 KLRRRSLAALRAEVEPVDASAYGRFLPAWQNVRTPGRRGQSAL---------RGLDGIIT 1276 Query: 1142 VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHL 1201 ++QL+GV +PAS WE +L +RV DY MLDEL+A G V+WSG L +DG V+LHL Sbjct: 1277 AVDQLSGVPVPASAWEPLVLASRVSDYQPAMLDELMAAGEVLWSGAGALPGNDGWVSLHL 1336 Query: 1202 QEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEA 1261 + A + PA D A Q+ + + +GG +F +Q++ I + + + A Sbjct: 1337 ADSAELTLNPAP-DYQPGDAQQRLLEHLQNNGGGYFFRQLTD-IAGGMDSVLSDQDVVSA 1394 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSSNARTSTR--------------RSH---------- 1297 LW L W G IT D +AP+RA+ A R+H Sbjct: 1395 LWDLAWAGRITGDTFAPVRAMIAGGHTAHRQVARAPRARAPRMSRLGRAHGTGLMGSAGL 1454 Query: 1298 -RARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQ 1356 R G A P P AGRWS L + L+ T A AE +LDRYG+++R Sbjct: 1455 TGGRYGSVTGAAPTPPLA-------AGRWSALPLPELDPTIHARATAELLLDRYGVVTRG 1507 Query: 1357 AVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQT 1416 +V+AENI GGF M + +E++GR RG F+E LG AQFA T+DRLR ++ +Q Sbjct: 1508 SVMAENILGGFGLMYKVLARLEEAGRCRRGYFIEHLGAAQFAVPATVDRLRSY-SEDSQL 1566 Query: 1417 RHYTPV--ALSANDPANVWGNLLPWPAHPATLV----PTRRAGALVVVSGGKLLLYLAQG 1470 PV AL+A DPAN +G LPWPA P R+AGALVV+ G L LY+ +G Sbjct: 1567 AKPEPVALALAATDPANPYGAALPWPALSVEAGSGHRPGRKAGALVVMVDGALALYVERG 1626 Query: 1471 GKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSS 1530 GK +L + E E+LA AL ++R + + +VN + TP L AG S Sbjct: 1627 GKTLLAFDEDPEVLA-AAAAALVGVVKRGAVDKLIMEKVNGHGILDTPAAAALTHAGAYS 1685 Query: 1531 SPQGL 1535 +P+GL Sbjct: 1686 TPKGL 1690 >UniRef50_C8NN73 ATP-dependent helicase n=12 Tax=Corynebacterium RepID=C8NN73_COREF Length = 1602 Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 727/1562 (46%), Positives = 987/1562 (63%), Gaps = 98/1562 (6%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P +WF F+ PT VQ TW A E+ALV+APTGSGKTLAAFL+AL+ L + G Sbjct: 21 FRPQVSEWFRDVFEAPTPVQEGTWRAVADGENALVVAPTGSGKTLAAFLWALNSLVEQTG 80 Query: 75 EDTREAH-----KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + + + + R+LYISP+KALG D++ NL+ PL GIA R G N+ VG Sbjct: 81 QTVLDTGSPTPVEGRRVRVLYISPLKALGVDIENNLRAPLTGIARTASRMGLDVPNITVG 140 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +R+GDTPA ER++ R PPDILITTPES YLMLTS+A L+ V+ VIIDE+HA+AG+KR Sbjct: 141 VRSGDTPAAERARQVRKPPDILITTPESAYLMLTSKAGAILKDVDVVIIDEIHAMAGTKR 200 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G HLAL+LERL+ L+ QR+GLSATVR VA FLGGDRPVT+V PPA + + + Sbjct: 201 GVHLALTLERLEKLVARPIQRVGLSATVRPLERVAQFLGGDRPVTIVAPPAEKKWDLTVT 260 Query: 250 VPVANMDDV------SSVA----------SGTGE-DSHAGREGSIWPYIETGILDEVLRH 292 VPV +M D+ S++ +G GE +S +GSIWP+IE + +V+ Sbjct: 261 VPVEDMSDLPVQEPGSTIGDYVIDDPLGLAGPGEAESALPTQGSIWPFIEHQVYQQVMSA 320 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSP-SIAVDAAHFESTSGATSNRVQSSDVFI 351 RST+VF NSR AE+LT+RLNE++A L+ P S++ + + ++ V + I Sbjct: 321 RSTLVFVNSRRTAERLTSRLNEIWA--LEHDPESLSAERRRPPAQVMVAADEVGQAPAVI 378 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ 411 AR+HHGSVSK++RA+TE LK G L+ VV+TSSLELGIDMGAVDLV+QV +P SVA GLQ Sbjct: 379 ARAHHGSVSKDERAMTETMLKEGTLKAVVSTSSLELGIDMGAVDLVVQVESPPSVAGGLQ 438 Query: 412 RIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 R+GRAGH VG S G F+P+ R DLV +A+ VE M G +E L P N LDVLAQQTVAA Sbjct: 439 RVGRAGHSVGATSTGSFYPKHRSDLVQTAITVERMTQGLIEELKVPMNALDVLAQQTVAA 498 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A+ + VD+W+ VRRA P+++L R VFD+ +D++SG YPS DF+ RP++V++R +G+ Sbjct: 499 TAITDVHVDDWFDTVRRAYPYRELDREVFDSVIDLVSGVYPSTDFAELRPRVVYDRVSGM 558 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLG 591 L RPGAQ +AVTSGGTIPDRGM+ V L GE RRVGELDEEMVYESRV D+ TLG Sbjct: 559 LEGRPGAQRVAVTSGGTIPDRGMFGVFLMGGE--GTPRRVGELDEEMVYESRVGDVFTLG 616 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF-LHLLADGAFFSG 650 A+SWRI++ITRDQV+VTPAPG + RLPFW G+ GRPAELG +G + +LAD + Sbjct: 617 ASSWRIEEITRDQVLVTPAPGHTGRLPFWTGDQAGRPAELGRALGAYRRRVLADPT--TS 674 Query: 651 TIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVH 710 + W A +N + ++ EQ ATGI+P + LVLER RDE+GDWRI+LH+PYGR V+ Sbjct: 675 GLEGW-AHDNLVTYLR----EQEEATGILPDEKTLVLERFRDELGDWRIVLHTPYGRGVN 729 Query: 711 EPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAV 770 WA+AI RI L G DA VA DDGIV R+P+ D + P A++F+F+ +++ + V E V Sbjct: 730 AAWALAIGARIAELTGMDAQAVAGDDGIVLRLPEGDEE-PGASLFMFDADEVEKTVTEQV 788 Query: 771 GSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRE 830 G+SALFA+RFRECAARALL+P R PG R PLWQQR RA+QLL++A+ YP FP+ILET+RE Sbjct: 789 GNSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRE 848 Query: 831 CLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERR 890 CLQDVYDLPAL+ L+ L +++I++VTT PSPF++SLLF Y FMY+ D+PLAE+R Sbjct: 849 CLQDVYDLPALKELVGDLQLRKVRIAEVTTQQPSPFSSSLLFNYTGAFMYEGDSPLAEKR 908 Query: 891 ASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGP 950 A+ L+LD LL LLG+V+ +LLDP VI +V +LQR RRA+ E L D LR LGP Sbjct: 909 AAALALDPSLLAKLLGEVELRQLLDPDVIEEVHTQLQRKGE-RRARNNEELADSLRILGP 967 Query: 951 MTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPE 1010 + +++L + + ++ R I+G+ LA + DA LRDALGV +P Sbjct: 968 IPLDELGEHISFDDPDLGD---------RAMTVRINGRPHLAQVLDAPLLRDALGVPVPP 1018 Query: 1011 SLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQ--LREQGLVM 1068 +P + ++ L L R++R A+ LA F LGIA L+ + + Sbjct: 1019 GVPA-QVETITDALEQLVNRWVRTRGPFVAQDLAEAFGLGIATAHTALRNADVVQGRYRQ 1077 Query: 1069 NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 +Q+ + + EV RR+R RSL AR+ T+PV+ + +AR LL+ Q V D P L Sbjct: 1078 GVQEQEYCATEVLRRIRSRSLAIARQQTKPVSQSAFARFLLDWQQVA-GVDKHPTL---- 1132 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 GVDG VIEQLAGV LPAS WE +LP RV DY+ LDEL A+G V+ G Sbjct: 1133 -----RGVDGTFAVIEQLAGVRLPASAWEDLVLPRRVGDYTPLHLDELTASGEVLVVGAG 1187 Query: 1189 KLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDK 1248 + G D + L +YAA+ E +ALQ++++ VLA GG + + + + D Sbjct: 1188 QAGSQDPWIMLLPADYAAQLM--PEPVTTGLTALQESVLEVLAPGGGF---RFADILADV 1242 Query: 1249 IGESVDL-------SALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA-- 1299 GE + L L+EALW LV G+++ D +AP+RA S + A + RR +R+ Sbjct: 1243 TGEDLGLITGHISPEQLREALWGLVEAGLVSPDSFAPVRARLASGTTAHRAKRRPNRSRL 1302 Query: 1300 RRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVI 1359 R GR +AQ + + P++ GRWSL L+ T R LA E LDRYG+++R +V+ Sbjct: 1303 RMGRTSFAQ-----MESSPPDMRGRWSLSVRPALDATTRSLAHGEAWLDRYGVVTRGSVV 1357 Query: 1360 AENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQA 1413 AE++ GGF + E+SG+ MRG +EGLG AQF+ IDRLR D+ Sbjct: 1358 AEDVIGGFALAYKVLSGFEESGKAMRGYLIEGLGAAQFSTPAIIDRLRGMDDSPDVEGWP 1417 Query: 1414 TQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKK 1473 + T ++A DPAN +G LPWP P+R AGA V+++ G LL +L +GG+ Sbjct: 1418 SGTTDPEVYLIAAADPANPYGAALPWPEQG----PSRAAGATVIIADGLLLAHLTRGGRT 1473 Query: 1474 MLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQ 1533 + ++ E E+ H +E + + ++N V +P R AG S +P+ Sbjct: 1474 LTLFTE-------EITHVARALAIQE---KLVVEKINGESVFDSPHLPAFRAAGASITPR 1523 Query: 1534 GL 1535 G+ Sbjct: 1524 GM 1525 >UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomycetales RepID=B2HDY0_MYCMM Length = 1539 Score = 1251 bits (3236), Expect = 0.0, Method: Compositional matrix adjust. Identities = 745/1577 (47%), Positives = 968/1577 (61%), Gaps = 113/1577 (7%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR+WF F PT Q W A ++ LVIAPTGSGKTLAAFL+ALD L Sbjct: 17 FSAITREWFTNTFAAPTPAQASAWAAIAAGDNTLVIAPTGSGKTLAAFLWALDSL----- 71 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R + +R+LY+SP+KAL DV+RNL+ PL G+ RRG + VG+R+GD Sbjct: 72 --ARCPDRTAGTRVLYVSPLKALAVDVERNLRTPLAGLTRLAERRGLPPPQISVGVRSGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TP R +L PPD+LITTPESL+LMLTS ARETL GV+TVI+DE+HA+A +KRGAHLA Sbjct: 130 TPPAVRRQLITRPPDVLITTPESLFLMLTSAARETLAGVQTVIVDEIHAIAATKRGAHLA 189 Query: 195 LSLERLDALL-----HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 LSLERLD L AQRIGLSATVR ++A FL G P T+V P + + + + Sbjct: 190 LSLERLDQLAPDRRAGPPAQRIGLSATVRPPEELARFLSGSAPTTIVAPHSAKTFDLTVQ 249 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 VPVA+M ++++ +IWP +E+ ++D + H STIVF NSR LAE+LT Sbjct: 250 VPVADMANLAN--------------NTIWPDVESRLVDLIESHNSTIVFANSRRLAERLT 295 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVF-----IARSHHGSVSKEQR 364 ARLNE++A +RS A+ + GA + + S F +AR+HHGSVSKEQR Sbjct: 296 ARLNEIHA---ERSGMTLPSEANTQVAGGAPAQIMASGQTFGAATLLARAHHGSVSKEQR 352 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 A E+ LK G L+ VVATSSLELGIDMGAVDLVIQV P SVASGLQRIGRAGHQVG VS Sbjct: 353 AQVEEDLKRGALKAVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGEVS 412 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 +G+ FP+ R DL+ A+ V+ M G++E + P NPLD+LAQ TVAAAA++ L D+W+ Sbjct: 413 RGVLFPKHRTDLLGCAISVQRMRTGQIETMRVPANPLDILAQHTVAAAALEPLDADQWFD 472 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 VRR+A + LPR VF+ATLD+LSG+YPS +F+ RP+LV++R TG LTARPGAQ LAVT Sbjct: 473 TVRRSASFATLPRSVFEATLDLLSGKYPSTEFAELRPRLVYDRGTGTLTARPGAQRLAVT 532 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 SGG IPDRG+++V L EK RVGELDEEMVYESR D+I+LGATSWRI +IT D+ Sbjct: 533 SGGAIPDRGLFTVYLASEAEK--PSRVGELDEEMVYESRPGDVISLGATSWRITEITHDR 590 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTI 662 V+V PAPG ARLPFWRG+ GRPAELG +G LA D A F ++ Sbjct: 591 VLVIPAPGEPARLPFWRGDDVGRPAELGAALGALTGELARLDRAEFDKRCAGLGFDDFAT 650 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 N+ GL+++Q+ AT +VP L++ER RDE+GDWR+ILHSPYG RVH P A+A+ R+ Sbjct: 651 DNLWGLLDDQKTATRVVPTDTTLLVERFRDELGDWRVILHSPYGLRVHGPLALAVGRRLR 710 Query: 723 ALWGADASVVASDDGIVARIPDTDGKL-----PDAAIFLFEPEKLLQIVREAVGSSALFA 777 +G D ASDDGIV R+PDT P A +FLF+ +++ IV VG+SALFA Sbjct: 711 DRYGLDEKPTASDDGIVVRLPDTISDTGTETPPGAELFLFDADEIDAIVTAEVGASALFA 770 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD 837 +RFRE AARALL+P R PG R+PLW QR RA+QLL++A+ YPDFP++LET+RECLQDVYD Sbjct: 771 SRFRESAARALLLPRRHPGRRSPLWHQRQRAAQLLDVARKYPDFPMVLETVRECLQDVYD 830 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 +P L LM + +++++ TT PSPFA SLLFGYV FMY+ D PLAERRA+ LSLD Sbjct: 831 VPTLTTLMTDIAQRRVRVAETETTKPSPFAASLLFGYVGAFMYEGDVPLAERRAAALSLD 890 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 S LL LLG+V+ ELLDP+VI +LQ L R A+ EG+ DLLR LGP+T +++A Sbjct: 891 STLLAELLGRVELRELLDPEVIAATGRQLQHLCADRAARDAEGVADLLRLLGPLTEDEVA 950 Query: 958 QRH-TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIY 1016 R T ++ +LE L A +R +G+ ++D RLRD +G +P LP + Sbjct: 951 ARSDTTGGTDIGGWLEGLRAARRALEVSYAGRSWWVAVEDIGRLRDGVGAAVPVGLPAAF 1010 Query: 1017 LHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM-------- 1068 V+ PL +L RY R H T + A F LG+ + + L +L G ++ Sbjct: 1011 TEAVADPLAELLGRYARTHPPFTTAEAAGRFGLGLRVTADVLGRLASDGRLVRGDFVATG 1070 Query: 1069 ---NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALF 1125 + W EV R LR RSL A R PV+ Y R L E V A D S Sbjct: 1071 VFGGAGSEQWCDAEVLRILRRRSLAALRAQVEPVSTAAYGRFLPEWHQVGGA-DSS---- 1125 Query: 1126 ASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS 1185 + G+D + VI+QLAGV +PAS E +L RVRDYS MLDELLATG V W+ Sbjct: 1126 -------HGGIDRLASVIDQLAGVRIPASALEPLVLAPRVRDYSPAMLDELLATGEVTWA 1178 Query: 1186 GQKKLGEDDGLVALHLQEYAAESF-TPAEADQANRSALQQAIVAVLADGGAWFAQQISQR 1244 G + DG V LHL + A + PAE + +AI+ LA GGA+F +Q+ Sbjct: 1179 GAGSISGSDGWVTLHLADSAPLTLAAPAEIEFGE---AHRAILDTLAGGGAYFFRQL--- 1232 Query: 1245 IRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRG-R 1303 IG+ D +A++ ALW L+W G + D +AP+RAL S +RS A RG R Sbjct: 1233 ----IGDIPDEAAIKAALWELIWAGRVCGDTFAPVRALL--GGGGPGSRKRSAPAHRGHR 1286 Query: 1304 P--------VYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISR 1355 P +AQP S P +AGRWSLL + T R AE +L+R+G++++ Sbjct: 1287 PPRLSRYSVAHAQPRS-----VDPTVAGRWSLLPPPEPDSTVRAHYQAELLLNRHGVLTK 1341 Query: 1356 QAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR---DLATQ 1412 AV +E +PGGF ++ + + ED+GR RG FVE LGGAQFA T+DRLR D + Sbjct: 1342 GAVASEGVPGGFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAVAATVDRLRSYLDDPSA 1401 Query: 1413 ATQTR--HYTPVALSANDPANVWGNLLPWP-----AHPATLVPTRRAGALVVVSGGKLLL 1465 T +R Y V L+A DPAN +G LPWP P R+AGALVV+ G L Sbjct: 1402 FTDSRRPQYQAVLLAAADPANPYGAALPWPTSDDDGSNVGARPGRKAGALVVLVDGALAW 1461 Query: 1466 YLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTE-VNDLPVRQ------TP 1518 +L +GG+ +L + + E A R R+ L E +N +PV Q + Sbjct: 1462 FLERGGRTLLTFTDDPEANAAAAIALADLVATR--RVGSLLVERINGVPVLQAGAGQASL 1519 Query: 1519 MFTLLREAGFSSSPQGL 1535 T L +AGF +P+GL Sbjct: 1520 AVTALADAGFLRTPRGL 1536 >UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacteria RepID=A6W838_KINRD Length = 1584 Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 753/1593 (47%), Positives = 984/1593 (61%), Gaps = 102/1593 (6%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS ATR WF AF PT Q W +R +HALV+APTGSGKTL+AFL+ALD L G Sbjct: 18 FSEATRAWFTGAFAAPTPAQLGAWDAVSRGQHALVVAPTGSGKTLSAFLWALDGL---AG 74 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 E E K R+LY+SP+KAL DV+RNL+ PL GI +R G +RVG+R+GD Sbjct: 75 EPVPE-DKDHRCRVLYVSPLKALAVDVERNLRSPLTGIRQAAQRLGLPVPEVRVGVRSGD 133 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T +ER TR PPD+LITTPESL+L+LTS+ARE LRGV TV++DEVHA+AGSKRGAHLA Sbjct: 134 TSQEERRGFTRTPPDVLITTPESLFLLLTSKAREQLRGVRTVVLDEVHAMAGSKRGAHLA 193 Query: 195 LSLERLDALLHTSA----QRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 LSLERLDAL+ + QR+GLSATVR VA ++ G RPVT+V PP+ + +R+VV Sbjct: 194 LSLERLDALVQAAGGEPTQRVGLSATVRPVQTVAEWVSGGRPVTIVQPPSTKEFDLRVVV 253 Query: 251 PVANMDDVSSVASG-------TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 PV +M D+ + G TG+ S R SIWP++E I+D V HRST+VF NSR Sbjct: 254 PVEDMSDLDASGRGAEDPDDLTGQASGGARRASIWPHVEERIVDLVAEHRSTLVFANSRR 313 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 L+E+LTARLNE++ RL A G + V +AR+HHGSVSKEQ Sbjct: 314 LSERLTARLNEVWDERLNPEEPDGAAPAPPAQLMGQAGTGTGAPAV-LARAHHGSVSKEQ 372 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R++ E+ LK+G L VVATSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAGHQVG V Sbjct: 373 RSLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAV 432 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 S+G+ FP+ R DL+ +AV+VE M GR+E L P NPLDVLAQQ VA AMD V + Sbjct: 433 SRGVLFPKFRGDLLQTAVVVERMRDGRIEELHVPANPLDVLAQQIVAMVAMDEWTVPDLL 492 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 + +RAAP+ L R V DA LDMLSGRYPS +F+ RP+LVW+R T LT RPGAQ LAV Sbjct: 493 ALAQRAAPFATLSRAVLDAVLDMLSGRYPSDEFAELRPRLVWDRVTETLTGRPGAQRLAV 552 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 TSGGTIPDRG+++V L GE RRVGELDEEMVYESRV D+ITLG+++WR++ IT D Sbjct: 553 TSGGTIPDRGLFAVFLATGEGPG--RRVGELDEEMVYESRVGDVITLGSSAWRVEDITHD 610 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFF---------SGTI 652 +V+VTPAPG+ RLPFW GE GRPAELG +G+F+ L DG F + + Sbjct: 611 RVLVTPAPGQPGRLPFWHGEALGRPAELGRALGEFVRELGGLDGGFAGEPARERVRAAGL 670 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 W N+ + EQ+ AT VP + +V+ER RDE+GDWRI +HSP+G +VH P Sbjct: 671 DDW-----ATGNLLAYLTEQQEATRHVPDDQTIVVERFRDELGDWRICIHSPFGGQVHSP 725 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTD---GKLPDAA-IFLFEPEKLLQIVRE 768 WA+A+ R+ +G D + +DDGIV R+PD D G+ PD A + E ++ +IV Sbjct: 726 WALALGARMRERFGVDVQAMPADDGIVLRLPDLDLPEGQSPDVADLVALEASEVAEIVTA 785 Query: 769 AVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETL 828 +G SALFA+RFRECAARALL+P R PG R PLWQQR RA+ LLE+A + FP++LET+ Sbjct: 786 EIGGSALFASRFRECAARALLLPRRQPGKRQPLWQQRQRAASLLEVASRFASFPIVLETV 845 Query: 829 RECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE 888 RECL DV+D+ LERLM L ++++ +V + PSPFA L+FGYVA+F+Y+ D+PLAE Sbjct: 846 RECLSDVFDVTGLERLMTDLAARKVRVVEVESQQPSPFARGLMFGYVAQFLYEGDSPLAE 905 Query: 889 RRASVLSLDSELLRNLLGQVDPG---ELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLL 945 RRA+ L+LD LL LLG+ + +LLDP+ +++ E+ELQRL P RR E + DLL Sbjct: 906 RRAAALALDPSLLAELLGRGEGAALRDLLDPEAVQRTEDELQRLVPERRCADAEDVADLL 965 Query: 946 RELGPMTVEDLAQRHTGSSE------------EVASYLENLLAVKRIFPAMISGQERLAC 993 R LGP+T ++ R +G E EVA +L L +R+ I+G+E A Sbjct: 966 RVLGPLTTAEVVVR-SGRGEPGSQGPAALPEGEVARWLVGLEEARRLIRVRIAGEEHWAV 1024 Query: 994 MDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAI 1053 ++DA RLRD LG LP +PE + V+ PL LF RY R T +A F +G A+ Sbjct: 1025 IEDAGRLRDGLGTPLPVGIPEAFTEPVADPLAGLFGRYARTRGPFTVLDVAARFGVGRAV 1084 Query: 1054 VEEQLQQLREQGLVMNLQQDI------WVSDEVFRRLRLRSLQAAREATRPVAATTYARL 1107 + L++L+ G ++ + + +V R LR RSL A R PV AR Sbjct: 1085 AHDALRRLQSAGRLVEGELRPGGTGLEFCDADVLRILRRRSLAALRADVEPVPPRDLARF 1144 Query: 1108 LLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRD 1167 L QGV S L + GVDGV+R +EQLAG +PAS E +L ARV Sbjct: 1145 LPAWQGV------STGLRSR-----LRGVDGVLRAVEQLAGAVVPASAVEPLVLAARVEG 1193 Query: 1168 YSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESF-TPAEADQANRSALQQAI 1226 YS MLDEL A G V+WSG L DDG V+LH + A + P +++ + L +A+ Sbjct: 1194 YSPAMLDELTAAGEVVWSGHGSLPGDDGWVSLHPADLAPLTLPDPRDSEIDLDTELHRAV 1253 Query: 1227 VAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRAL--TR 1284 + LA GGA+F + +S D +G S D L LW LVW G +T+D APLR R Sbjct: 1254 LDALAGGGAYFFRALS----DAVG-STDDPGLTSVLWDLVWAGRLTNDTLAPLRNRLGGR 1308 Query: 1285 SSSNARTSTRRSHRARRGRP---VYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLA 1341 + R + RS AR RP + V P+ AGRWSLL + T R A Sbjct: 1309 GAHKPRAAAPRSRYARTARPARGLRGTRVELPSRSGPPSAAGRWSLLPEIEADATVRAHA 1368 Query: 1342 LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERL 1401 AE +LDR+G+++R AV +E +PGGF ++ + + ED+GR RG FVEGLG +QFA Sbjct: 1369 SAEVLLDRHGVLTRGAVASERVPGGFAAVYRVLAAFEDAGRARRGYFVEGLGASQFATTG 1428 Query: 1402 TIDRLRDLA--------TQATQTRHYT---PVALSANDPANVWGNLLPWPAHPATLV--- 1447 +DRLRD A +Q ++R V L+A DPAN +G LPWP P Sbjct: 1429 AVDRLRDSARPVGGDSPSQRRESRRDAGPGAVVLAATDPANPYGAALPWPERPEVTAGAS 1488 Query: 1448 ---PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRF 1504 P R+AGALVVV G L+LY+ +GG+ +L W + E L P AL ++R + Sbjct: 1489 GHRPGRKAGALVVVVDGDLVLYVERGGRSVLSWTQDPETLQPAA-DALALSVRDGVLGKL 1547 Query: 1505 TLTEVNDLPVRQ--TPMFTLLREAGFSSSPQGL 1535 T+ + + V Q +P+ L AGF ++P+GL Sbjct: 1548 TVEKADGSGVLQADSPLAQALESAGFHATPRGL 1580 >UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacteria RepID=A8L6I9_FRASN Length = 1613 Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 717/1432 (50%), Positives = 910/1432 (63%), Gaps = 71/1432 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR+WF +F PT Q W A E ALV+APTGSGKTLAAFL++LD L R Sbjct: 20 FSAPTREWFASSFAAPTPAQAGAWAAVAGGESALVVAPTGSGKTLAAFLWSLDSLARS-- 77 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 A + R+LY+SP+KAL DV+RNL+ PL GI R G ++ VG+R+GD Sbjct: 78 --APPADPARRCRVLYVSPLKALAVDVERNLRAPLTGIRAAATRLGLPVPDVSVGVRSGD 135 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER R PPDILITTPESL+L+LTS RE LRGVETVI+DEVHAVAG+KRGAHLA Sbjct: 136 TPAAERRAFGRTPPDILITTPESLFLILTSATREALRGVETVIVDEVHAVAGTKRGAHLA 195 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL AQR+GLSATVR +VA FLGG RPVTVV PPA + I +VVPV + Sbjct: 196 LSLERLDDLLDVPAQRVGLSATVRPVDEVARFLGGPRPVTVVRPPAAKTLHIDVVVPVED 255 Query: 255 MDDVSSVASGTGEDSHAGR--EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 M ++ VA E S AG SIWP +E +LD +L H STIVF NSR LAE+L ARL Sbjct: 256 MANLGEVAGAVPEGSAAGAAPRASIWPAVEEKVLDLILGHSSTIVFANSRRLAERLCARL 315 Query: 313 NELYAARLQRSPSIAV---------DAAHFESTS--------------GATSNRVQSSDV 349 NELYA RL + + ++ +ES GA + V ++V Sbjct: 316 NELYADRLATADATGDPDGQETGGWESGGWESGERAGPAGSRAPAEIMGAAGSAVSPAEV 375 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASG 409 +AR+HHGSVS+EQR + E+ LK+G L VVATSSLELGIDMGAVDLV+Q+ +P SVA+G Sbjct: 376 EVARAHHGSVSREQRMLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQIESPPSVAAG 435 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 +QRIGRAGHQVG S+G+ P+ R DL++ AV+ E M GR+E + P NPLDVLAQQ V Sbjct: 436 MQRIGRAGHQVGAASRGVVLPKHRSDLLECAVVAERMSDGRIEAVRYPRNPLDVLAQQIV 495 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 A A++ +VDE + VRRAAP+ LP ++A LDML+GRYPS DF+ RP++ W+R T Sbjct: 496 AMVAVEDREVDELGALVRRAAPFATLPASAYEAVLDMLAGRYPSDDFAELRPRITWDRAT 555 Query: 530 GILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIIT 589 G+L RPGAQ LAVTSGGTIPDRGM+ V L GE+ + RVGELDEEMVYESRV D++ Sbjct: 556 GVLAGRPGAQRLAVTSGGTIPDRGMFGVFL-VGEKAS---RVGELDEEMVYESRVGDVVL 611 Query: 590 LGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS 649 LG++SWRI++IT D+V+VTPAPGR RLPFW G+ GRPAELG +G FL L+ + Sbjct: 612 LGSSSWRIEEITPDRVLVTPAPGRPGRLPFWHGDAPGRPAELGRALGAFLRELSAASPRD 671 Query: 650 GTIPPWLAEENT--IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGR 707 A +T AN+ ++EQR A G + R +V+ER RDE+GDWR+ +HSP+G Sbjct: 672 AADRVRAAGLDTWATANLLTYLDEQRAAAGHLSDDRRIVVERFRDELGDWRLAVHSPFGA 731 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVR 767 V+ PWA+AI R+ +GA+ ++ +DDGIVAR+PD + P+A + +FEPE+ +VR Sbjct: 732 PVNAPWALAIGARLRERYGAEVQIMHTDDGIVARVPDA-AEPPEAELVVFEPEETEALVR 790 Query: 768 EAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILET 827 VG SALFA+RFRECA+R+LL+P RTPG RTPLWQQR R++ LL +A + DFPV+LET Sbjct: 791 AEVGGSALFASRFRECASRSLLLPRRTPGRRTPLWQQRQRSAHLLSVASTFGDFPVVLET 850 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 +RECLQDVYD+PAL LMR + +++ +V T +PSPFA+SLLFGYVA FMY DAPLA Sbjct: 851 MRECLQDVYDVPALVGLMRDIGARSLRVVEVETPSPSPFASSLLFGYVAAFMYDGDAPLA 910 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 ERRA VLSLDS LL LLG+ + EL+DP + ++ ELQRL P R A G E DLLR Sbjct: 911 ERRAQVLSLDSSLLAELLGEAELRELIDPGALERITAELQRLVPDRHAHGVESTADLLRA 970 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVR 1007 LG DL G+ S+L L R+ I G+ R A ++DA RLRDALGV Sbjct: 971 LG-----DLTDEEAGARGVAPSWLAALADAGRVIRVRIGGEARWAPVEDAGRLRDALGVP 1025 Query: 1008 LPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLV 1067 LP +P + V PL DL RY R H +A F LG+A+V L++L G + Sbjct: 1026 LPMGVPAAFTEPVRDPLGDLVSRYARTHGPFEPAAVAARFGLGVAVVVGALERLTAAGRL 1085 Query: 1068 M--NLQQD----IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGS 1121 + L D W V R LR RSL A R+ V LPA Sbjct: 1086 VRGELHPDRAGEQWCDAGVLRALRRRSLAALRKEVEAVPTRAMGAF-------LPA---- 1134 Query: 1122 PALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGA 1181 + S + G GVD V+R +EQL G +PAS E +LPARV DYSS MLDEL ATG Sbjct: 1135 ---WQSVTTGRGHGVDAVLRAVEQLQGAPVPASALEQLVLPARVSDYSSAMLDELCATGE 1191 Query: 1182 VIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQI 1241 V+W+G L +DG V L L + A E P + D A L +AI+ LA A F + + Sbjct: 1192 VLWAGAGGLPGNDGWVTLVLADSAGELLPPPDLDAAG-GDLHRAILDALAGDQALFFRTL 1250 Query: 1242 SQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR- 1300 S R+ ++D +AL +ALW LVW G++T+D A LR + A + R R Sbjct: 1251 SDRV-----GALDDTALADALWDLVWAGLVTNDTLAALRVQLGAGRPAHPAHPVPPRRRS 1305 Query: 1301 -RGRPV-YAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAV 1358 RGRP + +P PR + P + GRWSLL + T R ALAE++LDR+GI++R AV Sbjct: 1306 ARGRPARFGRPTMPRRA-GPPTVGGRWSLLPEREPDPTRRAHALAESLLDRHGIVTRGAV 1364 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLA 1410 AE PGGF ++ + + ED+GR RG FVE LG AQFA +DRLR +A Sbjct: 1365 TAERTPGGFAAVYRVLSAFEDAGRCRRGYFVESLGAAQFAVPGAVDRLRAIA 1416 Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 7/115 (6%) Query: 1427 NDPANVWGNLLPWPAHPAT------LVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 +DPAN +G LPWP PA P R+AGALVV+ G+L+LY+ +GG+ +L W + Sbjct: 1496 SDPANPYGAALPWPKRPAADGEGSGHRPGRKAGALVVLVDGELVLYVERGGRTLLSWSDA 1555 Query: 1481 EELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 LL P V AL A+R R + + + V + + L AGF +P+GL Sbjct: 1556 PGLLGPAV-GALAGAVRTGSLGRLAVEKADGAAVVGSGLGAALERAGFHPTPRGL 1609 >UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium glutamicum RepID=Q8NS36_CORGL Length = 1520 Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust. Identities = 726/1551 (46%), Positives = 972/1551 (62%), Gaps = 96/1551 (6%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P +WF F PT VQ TW ++ ++ALV+APTGSGKTLAAFL+ALD L + G Sbjct: 9 FRPQVAEWFRDVFASPTPVQEGTWEAVSKGKNALVVAPTGSGKTLAAFLWALDSLTEQTG 68 Query: 75 EDTREAH-----KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + + + ++LYISP+KALG DV+ NL+ PL GIA R G N+ V Sbjct: 69 QQVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLTGIARTASRMGLDVPNITVA 128 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +R+GDTP+ ER++ R PPDILITTPES YLMLTS+A TL V+ VIIDE+HA+AG+KR Sbjct: 129 VRSGDTPSAERARQVRKPPDILITTPESAYLMLTSKAGATLSDVDVVIIDEIHAMAGTKR 188 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G HLAL+LERL+ L+ QR+GLSATVR VA FLGG RPV +V PPA + + + Sbjct: 189 GVHLALTLERLEKLVGRPVQRVGLSATVRPLETVAGFLGGGRPVEIVAPPAEKKWDLTVT 248 Query: 250 VPVANMDD--VSSVASGTGE-----------DSHAGREGSIWPYIETGILDEVLRHRSTI 296 VPV +M D V S GE +S +GSIWP+IE + ++V+ +STI Sbjct: 249 VPVEDMSDLPVQEPGSTIGELVMDDPLGITGESALPTQGSIWPHIEQQVYNQVMSAKSTI 308 Query: 297 VFTNSRGLAEKLTARLNELYAARLQR---SPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 VF NSR AE+LT+RLNE++A SP + D A S++ Q IAR Sbjct: 309 VFVNSRRSAERLTSRLNEIWAMEHDPESLSPQLRRDPAQIMSSADVAGKAPQ----VIAR 364 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 +HHGSVSK++RA TE LK G LR V++TSSLELGIDMGAVDLVIQV +P SVASGLQR+ Sbjct: 365 AHHGSVSKDERATTETMLKEGRLRAVISTSSLELGIDMGAVDLVIQVESPPSVASGLQRV 424 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GRAGH VG S G F+P+ R DLV +AV V+ M G +E + P N LDVLAQQTVAA + Sbjct: 425 GRAGHTVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEEIHVPKNALDVLAQQTVAAVS 484 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 + +QVDEWY +R+A P++DL R VFD+ +D++SG YPS DF+ +P++V++R +G+L Sbjct: 485 IKDVQVDEWYETIRKAYPYRDLAREVFDSVIDLVSGVYPSTDFAELKPRVVYDRVSGVLE 544 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGAT 593 RPG+Q +AVTSGGTIPDRGM+ V L G RRVGELDEEMVYESRV D+ TLGA+ Sbjct: 545 GRPGSQRVAVTSGGTIPDRGMFGVFL----VGDGPRRVGELDEEMVYESRVGDVFTLGAS 600 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP 653 SWRI++ITRDQV+VTPAPG + RLPFW G+ GRPAELG+ +G F SG + Sbjct: 601 SWRIEEITRDQVLVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRSTLTDPSSSG-LE 659 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 W A +N IA +Q EQ +TG++P + LVLER +DE+GDWRI+LH+PYGR V+ W Sbjct: 660 GW-AHDNLIAFLQ----EQEESTGVLPDEKTLVLERFKDELGDWRIVLHTPYGRGVNAAW 714 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 A+A+ +I G DA VA DDGIV R+P+ D + P AA+F+FE E++ +V E VG+S Sbjct: 715 ALAVGAKIAEETGMDAQAVAGDDGIVLRLPEGD-EDPSAALFMFEAEEIETLVTEQVGNS 773 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 ALFA+RFRECAARALL+P R PG R PLWQQR RA+QLL++A+ YP FP+ILET+RECLQ Sbjct: 774 ALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECLQ 833 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 DVYDLPAL+ L+ L +++I++VTT PSPFA++LLF Y FMY+ D+PLAE+RA+ Sbjct: 834 DVYDLPALKNLIEDLQLRKVRIAEVTTQQPSPFASALLFNYTGAFMYEGDSPLAEKRAAA 893 Query: 894 LSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTV 953 L+LD LL LLG+V+ +LLDP +I +V ++L+R R A+ E L D LR LGP+ + Sbjct: 894 LALDPALLAKLLGEVELRQLLDPDIIAEVHQQLRRQG-DRAARNNEELADSLRILGPIPL 952 Query: 954 EDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP 1013 ++L + T EN R I+G+E LA + DA LRDALGV +P +P Sbjct: 953 DELGEHIT---------FENPDLEDRAMTVRINGREHLAQVLDAPLLRDALGVPVPPGVP 1003 Query: 1014 EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQ--LREQGLVMNLQ 1071 + ++ L L R++R TA LA F LGIA LQ + E + Sbjct: 1004 A-QVETITDALEQLVNRWVRTRGPFTANDLAEAFGLGIATAITALQSAPVIEGRYRQGVD 1062 Query: 1072 QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPG 1131 + + EV +R RSL AAR+ TRPV+ + +AR LL+ Q + P +P L Sbjct: 1063 VQEYCATEVLSIIRRRSLAAARKQTRPVSQSAFARFLLDWQQIAP-VGATPEL------- 1114 Query: 1132 VYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG 1191 GVDG VIEQLAGV LPAS WE +LP RV DYS LDEL + G V+ G + G Sbjct: 1115 --RGVDGTYTVIEQLAGVRLPASAWEDLVLPRRVADYSPIHLDELTSNGEVLIVGAGQAG 1172 Query: 1192 EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGE 1251 D ++L +YAA+ A + S LQ A++ L GGA+ I + + G Sbjct: 1173 SRDPWISLLPVDYAAQLVGEA---STSMSPLQDAVLDQLRAGGAFLFSDI---LEENFGY 1226 Query: 1252 SVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR-RGRPVYAQPV 1310 + + LQEA+W LV G+++ D +AP+RA S + A + RR R+R R R +A V Sbjct: 1227 TT--AQLQEAMWGLVEAGLVSPDSFAPIRARLASGTTAHRAKRRPARSRLRTRTSFASDV 1284 Query: 1311 SPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSM 1370 P++ GRW+ L V+P + T R +A E LDRYG+++R +V+AE+I GGF Sbjct: 1285 P-------PDMRGRWT-LSVQPADATSRSVAHGEGWLDRYGVLTRGSVVAEDIVGGFALA 1336 Query: 1371 QTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYTPVAL 1424 + E+SG+ MRG F+EGLG AQF+ IDRLR D+ + + Sbjct: 1337 YKVLSGFEESGKAMRGYFIEGLGAAQFSTPAIIDRLRGHDDSPDVEGWPSGATDPDVYLI 1396 Query: 1425 SANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELL 1484 +A DPAN +G LPWP P+R AGA+VV+ G LL +L +GG+ + V+ + Sbjct: 1397 AAADPANPYGAALPWPEQG----PSRAAGAMVVLCDGLLLAHLTRGGRTLTVFSDN---- 1448 Query: 1485 APEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 P++ AL T R T+ ++N V +P+ R+ G + +P+G+ Sbjct: 1449 IPKIATALIT------YERLTVEKINGDNVFDSPLLEQFRKHGATITPKGM 1493 >UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDW5_BRAFD Length = 1601 Score = 1217 bits (3149), Expect = 0.0, Method: Compositional matrix adjust. Identities = 739/1607 (45%), Positives = 968/1607 (60%), Gaps = 102/1607 (6%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 LP FSPAT WF +F PT Q W R + LV+APTGSGKTLAAFL A+DRL Sbjct: 8 LPSSFSPATARWFEESFDAPTPAQAAAWEAIDRGDDTLVVAPTGSGKTLAAFLTAIDRLA 67 Query: 71 REGGEDTREAHKRK--------------------TSRILYISPIKALGTDVQRNLQIPLK 110 R + + ++ +LYISP+KALG DV+RNL PL Sbjct: 68 SGPAPADRPSGPGRAAAGPGRGGERGGGAGRGRRSTSVLYISPLKALGVDVERNLTSPLV 127 Query: 111 GIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL 170 G A GE L VG+RTGDTPA ER +L +PPDILITTPESL+LMLTS+ARETL Sbjct: 128 GTARTAESLGEVRRPLSVGVRTGDTPAAERRRLVTHPPDILITTPESLFLMLTSQARETL 187 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD 230 RGVETVI+DEVHAVAG KRG HLALSL RLDALL AQRIGLSATV +VAAFL G Sbjct: 188 RGVETVILDEVHAVAGGKRGVHLALSLARLDALLEAPAQRIGLSATVEPVEEVAAFLTGS 247 Query: 231 ---RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 R VTVV P + + I + +PVA++ + A ++ G ++WP++E +L+ Sbjct: 248 GRSREVTVVRPESTKRWDITVTLPVADLQSIEPPADAVDDEDVTG---TVWPHVERAVLE 304 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR-----SPSIAVDAAHFESTSGATSN 342 VL HRSTIVFTNSR AE+LT +LN L+A R+ +PS A S+ A + Sbjct: 305 RVLAHRSTIVFTNSRSQAERLTGKLNRLHARRVAVDAAAGAPSADSARAGASSSGSAGAG 364 Query: 343 RVQSSDVF----IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI 398 D IAR+HHGS+SKE RA E+ LKSG LRCVVATSSLELGIDMGAVDLV+ Sbjct: 365 GAGEEDGTEGEDIARAHHGSMSKEVRAGIEEQLKSGALRCVVATSSLELGIDMGAVDLVL 424 Query: 399 QVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPH 458 QVA P+SV+S LQR+GRAGH VG VS G P D++ SAV V+ AGR+E L P Sbjct: 425 QVAAPMSVSSLLQRVGRAGHDVGAVSTGSLHPLHAADVLRSAVAVQEAVAGRIEPLAVPR 484 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSA 518 N LDVLAQ TV+AAAMD LQVDEW+ VR A P++ LPR FD T+D+L+GRYPS DFS Sbjct: 485 NALDVLAQHTVSAAAMDDLQVDEWFDLVRTAHPYRALPRSAFDQTIDLLAGRYPSTDFSE 544 Query: 519 FRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM 578 RP+LV + +TGILTARPGAQ LAVTSGGTIPDRG+Y V L G++ + RRVGELDEEM Sbjct: 545 LRPRLVHDHDTGILTARPGAQRLAVTSGGTIPDRGLYPVHLVAGDDDSQPRRVGELDEEM 604 Query: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638 VYESR D+ITLG TSWRI++IT +V V+PA G S R+PFW G+G+GRPA LG I Sbjct: 605 VYESRRGDVITLGTTSWRIEEITASRVTVSPAFGLSGRIPFWHGDGDGRPASLGRAIASA 664 Query: 639 LHLLADGAFFSGTIPPWLAEE---------NTIANIQGLIEEQRNATGIVPGSRHLVLER 689 LA ++P AE+ + + + EQ++ATG VPG + LV+ER Sbjct: 665 QSELA-------SLPRPEAEDRLGTLGLDSDARTVLLDHLAEQQHATGTVPGPQQLVVER 717 Query: 690 CRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 DE+GDWR++LH G+R+ PWA+A+ R+ +G D +A+DDGIV RIP + + Sbjct: 718 FLDELGDWRVVLHCALGQRITGPWALAVGARVQERYGLDGQAMAADDGIVLRIPHGE-QP 776 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 P A +F+F PE++ Q VR VGSSALFAARFRECAARALL+P R P R+PLWQQR R+S Sbjct: 777 PGADLFVFTPEEIEQEVRRLVGSSALFAARFRECAARALLLPRRDPTQRSPLWQQRQRSS 836 Query: 810 QLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATS 869 LLE+A+ +PDFP++LE RECLQDVYDLPAL LM ++ +++ +V T PSPFA S Sbjct: 837 HLLEVARPHPDFPIMLEAARECLQDVYDLPALVELMEQIGRRRLEVREVETPAPSPFARS 896 Query: 870 LLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRL 929 LLFGY+A+F+Y DAPLAERR + L+LD LL LLG V ELLD +VI +VE++LQ L Sbjct: 897 LLFGYLAQFIYDGDAPLAERRTAALALDQSLLAELLGSVSLRELLDAEVIAEVEQQLQGL 956 Query: 930 APGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQE 989 R +G E + D LR LGP+T +DL++R T ++ + LE L +RI ++G+E Sbjct: 957 TAQRALRGGEQIADALRRLGPLTADDLSRR-TAEGVDLEAELEQLTRARRIISVRLAGRE 1015 Query: 990 RLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSL 1049 +A ++DA LRDALG LP LP+ +L V + L R+ R A F L Sbjct: 1016 HVAAVEDAGLLRDALGTALPPGLPQAHLAPVDRAVPQLLARWARGRGPFPAADAVEAFGL 1075 Query: 1050 GIAIVEEQLQQLR-----EQG-LVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATT 1103 + L+QL +QG + WV EV RR+R SL A+R PV Sbjct: 1076 APGVARGTLEQLTAERVLQQGEFTPGRDGEEWVEAEVLRRIRRASLAASRREIAPVPGPV 1135 Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 YAR L + Q + + + DG++ V++QL GV LP S WESQ+LPA Sbjct: 1136 YARFLGQWQHLAGRRADGRRDRPT-----WRDRDGLLSVVDQLTGVSLPLSAWESQVLPA 1190 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQ 1223 R+ D + +LD A+G ++W+G +LG +DG + LHL E + ++A S + Sbjct: 1191 RLPDVTPALLDAAFASGELVWTGHGRLGAEDGWIRLHLAEALPLGLDASALEEAAASLTE 1250 Query: 1224 QAIVAVL-----ADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAP 1278 + A L GA QI + D+ GE++ A+ EALW L + G+IT+D + Sbjct: 1251 GSTAARLLALLRGTPGALRHGQILTALADE-GEALAPPAVHEALWDLAFSGLITNDSFEA 1309 Query: 1279 LRALTR---SSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNL------AGRWSLLQ 1329 LR+ +R SS +R + R RRG + + + + + L AGRWS ++ Sbjct: 1310 LRSYSRGPASSRGSRAAGRSRPLTRRGAARLSAAMMRQGAASVSELAEGPVGAGRWSAVR 1369 Query: 1330 VEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFV 1389 VEP++ R ALA +LDR+G+++R A+ E+IPGGF ++ + +E++G RG FV Sbjct: 1370 VEPVDPAARAAALATLLLDRHGVVTRGAMDVEDIPGGFAAVYRVLAMLEENGSCRRGYFV 1429 Query: 1390 EGLGGAQFAERLTIDRLRDLATQATQT-----------RHYTPVALSANDPANVWGNLLP 1438 +GLG +QFA +DRLRD A T VAL+ DPAN +G LP Sbjct: 1430 DGLGASQFAPVEAVDRLRDRCHDAEAAPGPAESPGGGGADATTVALAVTDPANPYGAALP 1489 Query: 1439 W------PAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL 1492 W P AT+ P RRAGALV++ G + + +G K +L W EE EV L Sbjct: 1490 WPELTIPPPEGATVRPARRAGALVLLRDGHVRAVVDKGAKHLLWW--AEESARDEVAAQL 1547 Query: 1493 TTALRREPRL-RFTLTEVNDLPVRQTPMFTLLR---EAGFSSSPQGL 1535 A+ E RL + + +N + P+ + R +AG SP+ L Sbjct: 1548 VRAIAEESRLPQLRIERINGHGIDSAPVAEIARALVDAGCYRSPRSL 1594 >UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HC38_ARTCA Length = 1729 Score = 1207 bits (3124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 734/1723 (42%), Positives = 987/1723 (57%), Gaps = 221/1723 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR--- 71 F+ TRDWFL AF +PT Q W+ + HALV+APTGSGKTLAAFL+ALDRL Sbjct: 22 FTRPTRDWFLGAFTEPTPAQDGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLLSAAP 81 Query: 72 ----------------EGGEDTR--------EAHKRKTSRILYISPIKALGTDVQRNLQI 107 G + T+ A KRKT ++LYISP+KALG DV+RNL+ Sbjct: 82 APDTESLAEAAVPAAAAGTKGTKAPAKARRPRAPKRKT-KVLYISPLKALGVDVERNLRS 140 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR 167 PL GI +R G + VG+R+GDT +R L NPPDILITTPESL+LMLTSRAR Sbjct: 141 PLIGITQTAKRLGMPAPLITVGVRSGDTTTADRRALLSNPPDILITTPESLFLMLTSRAR 200 Query: 168 ETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL 227 ETL V+T+IIDEVHAVAG+KRGAHLA+SLERLDALL AQRIGLSATV VA FL Sbjct: 201 ETLTEVDTIIIDEVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPKELVAQFL 260 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG--TGEDSHAGREGSIWPYIETGI 285 G PV +V PP+ ++ + + VPV +M D+ A +G S + SIWP++E I Sbjct: 261 AGTAPVEIVAPPSKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKI 320 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS---------------------- 323 +D VL ++STIVF NSR L+E+LTARLNE+YA R + Sbjct: 321 VDLVLANQSTIVFANSRRLSERLTARLNEIYAERQLMAAGGGWDGSLADGAEAFDAPGNG 380 Query: 324 -------PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 P+ AH + +G+++ +D +AR+HHGSVSK+QRA+ E LKSG L Sbjct: 381 SAPPSGVPASTATPAHMMAQAGSSAG----ADPVLARAHHGSVSKDQRALIEDDLKSGRL 436 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 RCVVATSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAGHQVG +S+G+ FP+ R DL Sbjct: 437 RCVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGEISQGVLFPKHRADL 496 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 V +A+ VE M G++E L+ P NPLD+LAQQTVAA A+ ++ V+EW++ VRR+AP+ LP Sbjct: 497 VHTAITVERMLDGKIERLSIPANPLDILAQQTVAATALGSIDVEEWFATVRRSAPFASLP 556 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYS 556 R F+ATLD+L+GRYPS +F+ RP+++W+R G + RPGAQ LAVTSGGTIPDRG++ Sbjct: 557 RSAFEATLDLLAGRYPSDEFAELRPRIIWDRNEGTIEGRPGAQRLAVTSGGTIPDRGLFG 616 Query: 557 VLL----------PEGEEK-----AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT 601 V + P + K G RRVGELDEEMVYESRV D+ LGATSW+I+ IT Sbjct: 617 VYIIGTEMEGSASPSEDGKPAPAPKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDIT 676 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEE 659 D+V+V+PA G+ +LPFW+G+ GRP +LG +G F+ L+ D + + Sbjct: 677 HDRVLVSPAFGQPGKLPFWKGDSLGRPVDLGRALGAFVRELSASDAGPAAERCQASGLDA 736 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 N+ + EQ+ AT +VP LV+ER DE+GDWR+ILHSP+G VH PWA+A+ Sbjct: 737 FAANNLIQYLSEQKQATEVVPSDTTLVVERFHDELGDWRVILHSPFGMPVHAPWALAVGQ 796 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 R+H +G D S +A+DDGIV R+P + + P A +FLF+PE+L QIV VG SALFA+R Sbjct: 797 RLHQRYGLDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASR 856 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRECAARALL+P +TPG R PLWQQR R++QLL++A+ YP FP++LET+RECLQDVYDLP Sbjct: 857 FRECAARALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLP 916 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP-------------- 885 AL+ + + E+++ TT PSPFA SLLFGYVA+F+Y+ D+P Sbjct: 917 ALKDIAAAVERRELRVVQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDST 976 Query: 886 ------------------------------LAERRASVLSLDSELLRNLLGQVDPGEL-- 913 + +RR L ++LLR LLG +DP E Sbjct: 977 LLNELLGRVELRELLDAKVIDATERELQRLVPDRRVRGLEGVADLLR-LLGPLDPDEAAA 1035 Query: 914 -LDPQVIRQVEEELQRLAPGR--RAKGEEGLFDLLRELGPMTVEDLAQR----------- 959 L+P + ++ G A E + L + +DLA Sbjct: 1036 RLEPAGGVESAAGVEPATAGEPIEAPEAEPVGTLAAQADAGLADDLAPEPEPVEATPPPI 1095 Query: 960 HTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHR 1019 + + E+ ++L L R I G ER A ++DAARLRDA+GV LP +P ++ Sbjct: 1096 ASATVEKATAHLVALQRANRAIKVNIGGAERFAAVEDAARLRDAIGVPLPMGVPLAFIEP 1155 Query: 1020 VSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM----------- 1068 V+ PL DL RY R H TA + A LG+A+V L++L + G V+ Sbjct: 1156 VADPLGDLVSRYARTHGPFTAAEAAARLGLGVAVVGTALKRLADDGRVVEGEFRPHATPA 1215 Query: 1069 -------------------------NLQQDI------WVSDEVFRRLRLRSLQAAREATR 1097 L++ + W EV R+LR RSL A R Sbjct: 1216 AAGPEATPTGREDDGQPDGDGRQEETLREMVHAAVSEWCDAEVMRKLRRRSLAALRAEVE 1275 Query: 1098 PVAATTYARLLLERQGV-LPATD-GSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASL 1155 PV A Y R L Q V +P G P+L G+DG++ I+QL+GV +PAS Sbjct: 1276 PVDAAAYGRFLPAWQNVRIPGGGRGQPSL---------RGLDGIVTAIDQLSGVPIPASA 1326 Query: 1156 WESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEAD 1215 WE IL RV +Y MLDEL+A G V+WSG L +DG ++LHL + A + PA Sbjct: 1327 WEPLILAGRVSNYQPAMLDELMAAGEVLWSGAGALPGNDGWISLHLADSAELTLNPAPDY 1386 Query: 1216 QANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDI 1275 + + L+ + + +GG +F +Q+++ + + + + ALW L W G IT D Sbjct: 1387 EPGDAGLR-LLDHLRNNGGGYFFRQLTE-VAGGMDSVLSDQEVVSALWDLAWAGRITGDT 1444 Query: 1276 WAPLRALTRSSSNARTSTRRSHRAR----------RGRPVYAQPVSPRVSYNT------- 1318 +AP+R+L A ++ R+R G + Y + Sbjct: 1445 FAPVRSLIAGGHTAHRQVAKAPRSRAPRLNRLGRSHGTGLMGSAGLAGGRYGSQGAVATP 1504 Query: 1319 PNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSME 1378 P AGRWS L L+ T A AE +LDRYG+++R +V+AE I GGF M + +E Sbjct: 1505 PTAAGRWSALPQPELDATIHARATAELLLDRYGVVTRGSVMAEQILGGFGLMYKVLARLE 1564 Query: 1379 DSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPV--ALSANDPANVWGNL 1436 ++GR RG F+E LG AQFA T+DRLR A + +Q PV AL+A DPAN +G Sbjct: 1565 EAGRCRRGYFIEHLGAAQFAVPATVDRLRSYA-EDSQIAKAEPVALALAATDPANPYGAA 1623 Query: 1437 LPWPA----HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL 1492 LPWPA P R+AGALVV+ G L+LY+ +GGK +L + + +L AL Sbjct: 1624 LPWPALRDDAGTGHRPGRKAGALVVLVDGALVLYVERGGKTLLAFSDDPTILD-AAGAAL 1682 Query: 1493 TTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 + R + + +VN + TP+ L AG S+P+GL Sbjct: 1683 VGVVTRGAVDKLIMEKVNGQGILDTPIAAALSAAGAYSTPKGL 1725 >UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia sp. EuI1c RepID=D1VBA8_9ACTO Length = 1675 Score = 1192 bits (3084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 754/1706 (44%), Positives = 968/1706 (56%), Gaps = 232/1706 (13%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR WF AF PT Q W ALV+APTGSGKTLAAFL++LD L R G Sbjct: 10 FSAPTRAWFQAAFPAPTPAQAGAWAAVRAGGSALVVAPTGSGKTLAAFLWSLDELVRSG- 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 A + R+LY+SP+KAL DV RNL+ PL GI R G+T +R+G+RTGD Sbjct: 69 ---PPADPTRRCRVLYVSPLKALAVDVARNLRAPLAGIQAAATRLGQTVPEIRIGMRTGD 125 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER R PPDILITTPESL+L+LTS+ARE LR VETVI+DEVHAVA +KRGAHLA Sbjct: 126 TPATERRAFGRTPPDILITTPESLFLVLTSQAREALRAVETVIVDEVHAVASTKRGAHLA 185 Query: 195 LSLERLDALLHTSA-----------QRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 LSLERLDAL + + +RIGLSATVR +VA FLGG RPVTVV PPA + Sbjct: 186 LSLERLDALRTSESGGDPAPAAAPARRIGLSATVRPVEEVARFLGGTRPVTVVRPPARKT 245 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREG-------------------SIWPYIETG 284 + +VVPV +M D + G + G G SIWP +E Sbjct: 246 LLVDVVVPVRDMADPGAPDGLAGLTAPGGVSGLPTLESLADGPPAAEPAKPSIWPAVEAR 305 Query: 285 ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSG------ 338 +LD + H STIVF NSR +AE+L ARLNEL+ RL IA + A G Sbjct: 306 VLDLIEAHTSTIVFANSRRVAERLCARLNELHTERL-----IAAENASVHRGGGRIDLDG 360 Query: 339 --------------------ATSNRVQSSDVF--------------IARSHHGSVSKEQR 364 A RV ++V +AR+HHGSVS+EQR Sbjct: 361 PPAGPPDGQSDELDGPLGYHAEPTRVTPAEVMGAAGLARGSLPTAEVARAHHGSVSREQR 420 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 + E+ LK+G L VVATSSLELGIDMGAVDLV+Q+++P SVA+G+QR+GRAGHQVG S Sbjct: 421 LLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQISSPPSVAAGMQRVGRAGHQVGVES 480 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 +G+ P R DL+++AV+ E M G +E P NPLDVLAQQ VA A+D V E + Sbjct: 481 RGVVLPSHRADLLEAAVVAERMRDGAIEEARYPRNPLDVLAQQIVAMTAVDTWPVAELGA 540 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 VRRAAP+ LP F+A LDMLSGRYPS F+ RP++VW+R + RPGAQ LAVT Sbjct: 541 LVRRAAPFATLPGGAFEAVLDMLSGRYPSDAFAELRPRIVWDRAANTVAGRPGAQRLAVT 600 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 SGGTIPDRG++ V L GE+ + RVGELDEEMVYESRV D++ LG++SWRI++IT D+ Sbjct: 601 SGGTIPDRGLFGVFL-VGEKAS---RVGELDEEMVYESRVGDVVLLGSSSWRIEEITPDR 656 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL-------ADGAFFSGTIPPWLA 657 V+VTPAPGR RLPFW G+ GRPAELG +G FL L A+ + W Sbjct: 657 VLVTPAPGRPGRLPFWHGDSPGRPAELGRALGAFLRELTRKSPQDAEARLRQAGLDEW-- 714 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 +N+ ++EQR A G + R LV+ER RDE+GDWR+ +HSP+G RV+ PWA+AI Sbjct: 715 ---ATSNLLAYLDEQREAAGRLSDDRTLVVERFRDELGDWRLAVHSPFGARVNAPWALAI 771 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 AGR+ +GA+ V+ +DDGIVAR+PD D A + +F+P+++ +VR VG+SALFA Sbjct: 772 AGRLRERYGAEVQVMHTDDGIVARVPDADAAPGAADV-VFDPDEIAAVVRTEVGASALFA 830 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD 837 +RFRECA RALL+P R+PG RTPLWQQR R++ LL +A G+ +FPV+LET+RECLQDV+D Sbjct: 831 SRFRECAGRALLLPRRSPGRRTPLWQQRQRSAALLSVAAGFENFPVVLETMRECLQDVFD 890 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 +PAL L R ++ +++ +V T PSPFA SLLFGYVA F+Y DAPLAERRA +LSLD Sbjct: 891 VPALVELHRDVDARRLRVVEVETPAPSPFARSLLFGYVATFLYDGDAPLAERRAQMLSLD 950 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 S LL LLG+ D EL+DP + +VE EL RLAP RRA+ EG DLLR LG +T + Sbjct: 951 SRLLAELLGETDLRELIDPTALAEVEAELARLAPDRRARDVEGAADLLRVLGDLTTAEAL 1010 Query: 958 QRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYL 1017 R G++EE L + I+G+ER ++DA RLRDALGV LP +P + Sbjct: 1011 AR--GATEEWLRALAAAGRALEV---RIAGEERWVAVEDAGRLRDALGVPLPMGVPTAFT 1065 Query: 1018 HRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVS 1077 V PL DL R+ R AE+LA F LG+++ L++L G ++ + Sbjct: 1066 EPVRDPLGDLVSRFTRTRGPFDAEELAARFGLGVSVAVGALERLVGAGRLVRGE------ 1119 Query: 1078 DEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGS--PALFASTSPGVYEG 1135 R R E R + + A E + V P G+ PA A T+ G G Sbjct: 1120 ---LRPGRTGEQWCDAEVLRRLRRRSLAASRREVEAVPPRALGAFLPAWQAVTA-GRSRG 1175 Query: 1136 VDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDG 1195 VD V R +EQL G +PAS WE +LPARV DYS MLDEL ATG V+W+G L DDG Sbjct: 1176 VDAVARAVEQLQGALIPASAWEQLVLPARVADYSPAMLDELCATGEVLWAGAGGLPGDDG 1235 Query: 1196 -------------------------------------LVALHLQEYAAESFTPAEADQ-- 1216 L AL E PA+ Q Sbjct: 1236 WVTLMLADAAPLLLPALAARAGDTGEPSPSSRAATVDLAALATGEAGER---PADGSQHP 1292 Query: 1217 ------------ANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWA 1264 A + L +A++ LAD A F + +S R+ S+D +AL +W Sbjct: 1293 PTDDGPDLMIDDAAATPLHRAVLDALADDQALFFRTLSDRV-----GSLDDTALAGVIWD 1347 Query: 1265 LVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYA---------------QP 1309 LVW G+IT+D APLRA R S + T+ R R RR +A +P Sbjct: 1348 LVWAGLITNDTLAPLRA--RLSGGSATTHRAPPRPRRSTMRFASGYGAGLTGTGRGAGRP 1405 Query: 1310 VSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPS 1369 +PR P +AGRWSLL + T R ALAE +LDR+G+++R AV+AE PGGF + Sbjct: 1406 ATPRRG-GPPMVAGRWSLLPPRDTDPTRRAHALAETLLDRHGLVTRGAVVAERAPGGFAA 1464 Query: 1370 MQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQ----------------- 1412 + + + ED+GR RG FVEGLG AQFA +DRLR +A Sbjct: 1465 VYRVLSAFEDAGRARRGYFVEGLGAAQFAMPGAVDRLRAVAATQRAADEEPDWVEQPGGI 1524 Query: 1413 -------------------ATQTRHYTPVALSANDPANVWGNLLPWPAHPAT-----LVP 1448 A + V L+A DPAN +G LPWPA P Sbjct: 1525 TGALGAVAFPAPGGRAQPGARRETDRRAVVLAATDPANPYGAALPWPARSEDPDGPGHRP 1584 Query: 1449 TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTE 1508 R+AGALVV+ G L+LY+ +GGK +L W E L P V AL A+R + + Sbjct: 1585 GRKAGALVVLVDGDLVLYVERGGKTLLSWPEPARALQPAV-DALALAVRDGWLGQLAVER 1643 Query: 1509 VNDLPVRQTPMFTLLREAGFSSSPQG 1534 + + + + L AGF +P+G Sbjct: 1644 ADGRAITGSALGDALVRAGFHPTPRG 1669 >UniRef50_A1A256 ATP-dependent helicase II n=4 Tax=Bifidobacterium RepID=A1A256_BIFAA Length = 1625 Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 727/1701 (42%), Positives = 960/1701 (56%), Gaps = 274/1701 (16%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+FS T+ WF AF PT Q W E+ LV+APTG GKTL AFL A+DRL + Sbjct: 17 DLFSEPTKAWFKHAFNAPTEAQRLAWPAIRSGENVLVVAPTGFGKTLCAFLSAIDRLMTK 76 Query: 73 ----------GGEDTRE----AHKRKTSR---ILYISPIKALGTDVQRNLQIPLKGIADE 115 GG+ T E A KRK R +LYISP+KALG DV +NLQ PL GIA + Sbjct: 77 EGDDLLRTSGGGDGTAESDCNAKKRKPVRGVKVLYISPLKALGVDVAKNLQAPLAGIAGQ 136 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVET 175 G + VGIR+GDT QER ++ +PPDIL+TTPESL+L+LTS+AR L V+T Sbjct: 137 CEAMGLPSPKVSVGIRSGDTTPQERRRIVSHPPDILVTTPESLFLLLTSKARRILSAVDT 196 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 VI+DEVHA+AGSKRGAHLALSLERL++L S QRIGLSATV ++ A FLGG RPV V Sbjct: 197 VIVDEVHAIAGSKRGAHLALSLERLESLAGRSVQRIGLSATVEPPAEAARFLGGIRPVRV 256 Query: 236 VNPPAMRHPQIRIVVPVANMDD----------------------VSSVA----------- 262 + P + +++V P++ M D +S V+ Sbjct: 257 IRPESHPDMDLKVVEPLSAMRDPVSDDAGRRAGAVKLPNRHTTHISGVSPAMEALAERKG 316 Query: 263 -SGTGEDSHAGR---EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 + G D H R GS+WP IE +LDEVL+H +T+VF NSRGLAEKLTARLN+LYA Sbjct: 317 LTSVGGDEHTSRVSTGGSVWPAIERSVLDEVLKHHTTLVFVNSRGLAEKLTARLNDLYAQ 376 Query: 319 -------------------------RLQRS-----------PSIAVD------------- 329 RL R+ S A D Sbjct: 377 LCTSRKTGSETAVKADAGRDALSDRRLGRTDLSVSDNASQPESTASDSTQPYPDLGSPEG 436 Query: 330 ----AAHFESTSGATSNRVQS-SDV-FIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 A H++S G+T+ V S +D IA +HHGSVSK++R E+ LK G+LRCVVATS Sbjct: 437 REGFAKHYDSVVGSTTMLVSSHADADAIAMAHHGSVSKDRRKQIEEQLKRGQLRCVVATS 496 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV 443 SLELGIDMG+VDLVIQ+A PLSV+SGLQR+GRA H+VGGVS LF+P TR ++ +A + Sbjct: 497 SLELGIDMGSVDLVIQIAPPLSVSSGLQRVGRADHKVGGVSHALFYPITREQIIGTAASI 556 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 ECM +G +E LT P PLDVLAQQTVAAAAMD L+ D+WY VR+AAP++DL R +FDA Sbjct: 557 ECMRSGDIETLTIPCTPLDVLAQQTVAAAAMDDLKPDDWYVTVRKAAPFEDLDRTMFDAV 616 Query: 504 LDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE 563 + M++G Y DFSAFRP L +N E G+++ARPGAQ LAVTSGGTIPDRG Y+V+LPE Sbjct: 617 MGMMTGAYNGEDFSAFRPPLQYNEEAGLISARPGAQRLAVTSGGTIPDRGTYTVVLPEEG 676 Query: 564 EKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE 623 G R+VGELDEEMVYESRV D+ITLG ++W+IQ+ITRD+V+V PAPGR+ARLPFW GE Sbjct: 677 SGPGPRKVGELDEEMVYESRVGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLPFWHGE 736 Query: 624 GNGRPAELGEMIGDFLHLLADG--------------AFFSGTIPPWL----AEENTIANI 665 G+GR A G G F+ +A G + F T L ++N I N+ Sbjct: 737 GDGRDAAFGRSQGRFIRDMAQGLRAEVSDGIAGDKTSRFDTTTIARLRRDGLDDNAIGNL 796 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 L+ EQR ATG +P R LV+ERC+DE GDWR+I+HSPYGRRVHEPWA+AI RI + Sbjct: 797 ADLLAEQRAATGTIPNDRELVVERCQDEEGDWRVIVHSPYGRRVHEPWAMAITTRIKQRY 856 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G D V A+DDGI+ R+PD DG LP + LF+ E+L +I+ VG S L+AARFRECAA Sbjct: 857 GFDGQVYAADDGIIIRLPDGDGNLPIRELLLFDTEELQRIIETQVGESVLYAARFRECAA 916 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 R+L +P PG R PLWQQRLRA+QLL A+ +FP++LET RECLQDVYDLPAL+ +M Sbjct: 917 RSLFLPRANPGRRVPLWQQRLRAAQLLNAARTRKNFPLLLETARECLQDVYDLPALKHVM 976 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 L G I +S+ T TPSPFA ++LFGYV MYQ D P AER +LS+D E+L LL Sbjct: 977 SGLRSGVISLSETVTETPSPFAENMLFGYVGAVMYQYDVPQAERSTQLLSMDPEVLERLL 1036 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDL-------LRELGPMTVEDLAQ 958 G D LLD VI QV +EL GR + D+ ++ GP T + + Sbjct: 1037 GATDMASLLDADVIAQVGKELA----GRTFWNDLDETDIAGRVARYVKTHGPFTADQMIA 1092 Query: 959 RHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLH 1018 + + L+ L A + A DA D+ R P P+ +LH Sbjct: 1093 ELGLDAVQGVRMLDELHAKGELLKGHFVDD---AAGADANGSDDSASERSPRQTPQQWLH 1149 Query: 1019 RVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSD 1078 +D+F R +RA +L A Sbjct: 1150 ------KDVF-RRIRALSLAKA-------------------------------------- 1164 Query: 1079 EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDG 1138 R+A +PV Y LL+RQGV P YE VDG Sbjct: 1165 --------------RKAIKPVEPAVYQAFLLDRQGVGPVGGAR-----------YESVDG 1199 Query: 1139 VMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG---EDDG 1195 +MRVIEQL G+ L AS+WES + PARVRDY MLDELLA+G V+W G K G ++ G Sbjct: 1200 LMRVIEQLEGIYLNASVWESSVFPARVRDYQPSMLDELLASGDVVWVGSKINGSNAKEAG 1259 Query: 1196 LVALHLQEYAAESFTPAEADQANRSA-----LQQAIVAVLADGGAWFAQQISQ------- 1243 +A H + + P E Q N + + + I+AVL++GGA+ A+Q+S Sbjct: 1260 GIAFHPADSRLLT-KPGEQSQNNAYSAGTMTVPETILAVLSNGGAFHARQLSTAAKAIWQ 1318 Query: 1244 -----RIRDKIGESV----DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTR 1294 + + GE + S +EALW+LVWQG +T+ +AP+RALT+ + + R Sbjct: 1319 EHAEVNVNPETGEIILPAWGESQFEEALWSLVWQGKVTNSSFAPVRALTQGTVSVRAPRT 1378 Query: 1295 RSHRARRGRPVYAQPVSPRVSYNTP-NLAGRWSLL---QVEPL------NDT-------- 1336 + R R+ +TP L G WS + + P+ +DT Sbjct: 1379 AARRRV------------RIHASTPATLGGLWSAVDSSRTSPMAIPDQTDDTAGKPTAGI 1426 Query: 1337 -ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGA 1395 E +AL E++LDRYG+I+ + E + GGF + + + ME+ G ++RG FV+G G A Sbjct: 1427 EEYDIALIESLLDRYGVIAAPLIDKEQVAGGFSGLYPVLKRMEEHGNLVRGMFVKGFGAA 1486 Query: 1396 QFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGAL 1455 QFA R T+D LR + R + VAL DPAN+ G+ + WP + P RA ++ Sbjct: 1487 QFAGRDTVDALRG----DDEARSQSCVALDVTDPANLTGSAITWPEQ-HHMKPACRAESV 1541 Query: 1456 VVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR 1515 +V+ G +L+ +++ + + E +L P L AL+ + + + E+N ++ Sbjct: 1542 IVLDHGMPVLFAVPKSHRIVSFTDDERILQPACTE-LAYALQHQSKGSVSFAEMNGESLK 1600 Query: 1516 QTPMF-TLLREAGFSSSPQGL 1535 + + LL AGF SPQG+ Sbjct: 1601 ERNEYRRLLHAAGFVDSPQGM 1621 >UniRef50_C0XQ89 Lhr family helicase n=2 Tax=Corynebacterium RepID=C0XQ89_9CORY Length = 1529 Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 691/1499 (46%), Positives = 913/1499 (60%), Gaps = 90/1499 (6%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P WF F PTAVQ W + E+ALV+APTGSGKTLAAFL++L+ L Sbjct: 7 DRFHPQVATWFSEVFAAPTAVQEGAWRAISAGENALVVAPTGSGKTLAAFLWSLNSLVER 66 Query: 73 GGEDTR--EAHKRKTS---RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G+ + R T ++LYISP+KALG DV+ NL+ PL GIA +R G ++ Sbjct: 67 AGQQALPIDGSARSTHGGVKVLYISPLKALGVDVENNLRAPLGGIARVAQRMGLDTPDIS 126 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 VG+R+GDTP ER++ R PPDILITTPESLYLMLTS+A L V+TVI+DE+HA+AG+ Sbjct: 127 VGVRSGDTPQAERNRQVRKPPDILITTPESLYLMLTSKAAGILTSVDTVIVDEIHALAGT 186 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRG HLALSLERL + QRIGLSATVR +VA FLG T+VNPPA + + Sbjct: 187 KRGVHLALSLERLRRITG-PFQRIGLSATVRPLEEVANFLGPK--TTIVNPPAEKKWSLG 243 Query: 248 IVVPVANMDD--VSSVASGTGE--------DSHAGREGSIWPYIETGILDEVLRHRSTIV 297 + VPV ++ D V AS GE + G SIWP+IE + D+V+ HRSTIV Sbjct: 244 VHVPVEDLSDLPVPEEASTIGEAVVDDLLDPAPVGASKSIWPHIERAVYDKVMAHRSTIV 303 Query: 298 FTNSRGLAEKLTARLNELYAARLQ---RSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 F NSR AE+LT++LNEL+AA SP++ A S T+ Q+ IAR+ Sbjct: 304 FVNSRRTAERLTSQLNELWAAEHDPDALSPALRRPPAQLMK-SVDTAGHAQT---LIARA 359 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGSVSKE+R TE LK G L+ V++TSSLELGIDMGAVDLVIQV +P SVASGLQR+G Sbjct: 360 HHGSVSKEERLTTETMLKEGTLKAVISTSSLELGIDMGAVDLVIQVESPPSVASGLQRVG 419 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 RAGH VG S G F+P+ R DLV +AV V M AG +E L P +PLDVL QQT+AA A+ Sbjct: 420 RAGHSVGETSVGAFYPKHRSDLVQTAVTVPRMRAGLIEELRTPLSPLDVLTQQTIAAVAV 479 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 + + VDEW+ VR A P+++L R VFDA +D++ G YPS DF+ +P+ + + +L A Sbjct: 480 EDVDVDEWFDTVRAAWPYRNLSRDVFDAVIDLVVGVYPSTDFAELKPRAILDGT--VLKA 537 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATS 594 RPGAQ +AVT+ GTIPDRGM+ V L G E A RRVGELDEEMVYESRV D+ TLGA+S Sbjct: 538 RPGAQRVAVTNAGTIPDRGMFGVFL-VGSEGA-PRRVGELDEEMVYESRVGDVFTLGASS 595 Query: 595 WRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 WRI+ ITRDQV V+PAPG + RLPFW G+ GRP ELG+ +G+F G + Sbjct: 596 WRIENITRDQVQVSPAPGHTGRLPFWTGDSLGRPYELGKALGEFRRQARSGPLDASL--- 652 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 +E N+ ++EQ ATGI+P LVLER DE+GDWR++LH+P+G+ V+ WA Sbjct: 653 ---DEFARRNLIAYLDEQEEATGIIPDDTTLVLERFTDELGDWRVVLHTPFGKGVNAAWA 709 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 +A RI G DA VA DDGIV R+P + K PD+++F F+ +++ IV VG+SA Sbjct: 710 LAAGWRISQETGMDAQAVAGDDGIVLRLPQGE-KEPDSSLFAFDADEITDIVTAQVGNSA 768 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQD 834 LFA+RFRECAARALL+P R PG R PLWQQR RA QLL++A+ YP FP+ILET+RECLQD Sbjct: 769 LFASRFRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDVARNYPSFPIILETVRECLQD 828 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 VYDLPAL +M+ L I++++VTT PSPFA+SLLF Y FMY+ D PLAE+RA+ L Sbjct: 829 VYDLPALREVMQHLQTRRIRVAEVTTDQPSPFASSLLFNYTGAFMYEGDTPLAEKRAAAL 888 Query: 895 SLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVE 954 SLD LL LLG V+ ELLD +I +V+ L+R+ +A E D LR +GP+ ++ Sbjct: 889 SLDPSLLAKLLGTVELRELLDADIIAEVDASLRRVG---KALTSEQFADTLRIVGPVPLD 945 Query: 955 DLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPE 1014 +L + +S + S E L A R+ I G+ +A DA LRD LGV +P + Sbjct: 946 EL---DSYTSVPLVSLEEALGA--RVMRVRIGGRSHIAQALDAPLLRDGLGVPVPPGV-A 999 Query: 1015 IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM------ 1068 + ++ L L R++R LA F L + L L + G V+ Sbjct: 1000 AQVATINDALAQLVSRWVRTRGPFVLRDLADAFGLAVGAAYSALAPLLDSGKVIEGRYRQ 1059 Query: 1069 NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 + + +V+ EV R +R RSL AAR TRPV+ + + R L V PA G A Sbjct: 1060 GVTEQEYVAAEVLRIIRSRSLAAARAQTRPVSQSAFGRFLPSWSHVAPA--GQVAAL--- 1114 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 G DGV V+EQLAGV LPAS WES +LP+RV DYS MLDEL A+G + G Sbjct: 1115 -----RGADGVYTVLEQLAGVRLPASAWESHVLPSRVGDYSPAMLDELTASGEISIVGAG 1169 Query: 1189 KLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDK 1248 K G D + L +YA + ++ + S Q ++ + GG + + Q Sbjct: 1170 KAGARDPWLMLLPTDYAGQLM--PDSTEPTMSLTQAQVMEKIRGGGGFLFTDLLQ----- 1222 Query: 1249 IGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA--RRGRPVY 1306 G +V+ L+E++W LV G + D +AP+RA + A + RR R+ R GR + Sbjct: 1223 -GTTVE--ELRESMWDLVEAGFVAPDSFAPIRARLSGGTTAHRAKRRPSRSRVRTGRTSF 1279 Query: 1307 AQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGG 1366 A + P++ GRW+ + T R +A E LDRYG+++R +V+AE++ GG Sbjct: 1280 A-------TLTPPDMVGRWAATPGVDTDATRRSVAFGEAWLDRYGVVTRGSVVAEDVLGG 1332 Query: 1367 FPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYT 1420 F + E+SG+ MRG +EGLG +QF+ TIDRLR D+ + TR Sbjct: 1333 FALAYKVLSGFEESGKAMRGYLIEGLGASQFSTPATIDRLRGHQDSDDVVGWPSGTREPL 1392 Query: 1421 PVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQE 1479 L+A DPAN +G LPWPA PTR AGA+VV+ G L ++ +GGK M + E Sbjct: 1393 VYVLAATDPANPYGAALPWPAQG----PTRSAGAMVVLIDGLLAAHITRGGKTMTTFFE 1447 >UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AY23_STRRD Length = 1620 Score = 1159 bits (2999), Expect = 0.0, Method: Compositional matrix adjust. Identities = 740/1646 (44%), Positives = 950/1646 (57%), Gaps = 164/1646 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F+P TRDWF AF PTA Q W AR ++ LV+APTGSGKTLAAFL++LDRL E Sbjct: 12 DHFTPVTRDWFTGAFASPTAAQEGAWASIARGDNTLVVAPTGSGKTLAAFLWSLDRLAAE 71 Query: 73 -----GGEDTREAHKRKTSR----------ILYISPIKALGTDVQRNLQIPLKGIADERR 117 GG A R+ SR +LY+SP+KAL DV+RNL+ PL G+ R Sbjct: 72 RAAATGGPAEDAAGGRRRSREDDAPAGQCRVLYVSPLKALAVDVERNLRAPLAGMRQTAR 131 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVI 177 R G + V IR+GDT QER + P DILITTPESL+L+LTS+ARE LRGVETVI Sbjct: 132 RLGLAVPEISVAIRSGDTSPQERRRFAARPSDILITTPESLFLLLTSQAREALRGVETVI 191 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +DEVHAVA +KRGAHLALSLERLDALL AQRIGLSATVR ++VAAFLGG RP V+ Sbjct: 192 VDEVHAVAATKRGAHLALSLERLDALLPQPAQRIGLSATVRPVNEVAAFLGGPRPAAVIQ 251 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDS------HAGREGSIWPYIETGILDEVLR 291 PP+ + ++++VVP+ +M ++ S + D SIWP++E + D + Sbjct: 252 PPSEKTIEVKVVVPIEDMTELDSAPRPSRPDDDDQWLLEPPARRSIWPHVEERLFDLIEE 311 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVD------AAHFESTSGATSN--- 342 H STIVF NSR LAE+L RLNEL R A F + + S Sbjct: 312 HSSTIVFANSRRLAERLCTRLNELAWERRAGEAEPPEPSEPAHWAGGFPAPPASLSTPAA 371 Query: 343 ------RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 + + I R+HHGSVSKE+R+ E+ALKSG L VVATSSLELGIDMGAVDL Sbjct: 372 MMAQAGAAKGTVPEIVRAHHGSVSKEERSQIEEALKSGRLPAVVATSSLELGIDMGAVDL 431 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTP 456 V V +P SVASGLQRIGRAGHQVG VS+G+ FP+ R DLV +AV+ E M +G +E L Sbjct: 432 VACVESPPSVASGLQRIGRAGHQVGAVSRGVIFPKYRGDLVQTAVVAERMKSGEIEELRY 491 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 P NPLDVLAQQ VA A+D VD+ + VRRAAP++ LPR +ATLDML+GRYPS +F Sbjct: 492 PRNPLDVLAQQIVAMTALDEWTVDDLETLVRRAAPYRTLPRGALEATLDMLAGRYPSEEF 551 Query: 517 SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 + RP++VW+R TG L RPGAQ LAVT+GGTIPDRG++ V L GE+ + RVGELDE Sbjct: 552 AELRPRVVWDRVTGTLRGRPGAQRLAVTNGGTIPDRGLFGVFL-VGEKAS---RVGELDE 607 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 EMVYESR D+ LGATSWRI+ IT D+V+V+PAPG+ +LPFW G+ GRPAELG IG Sbjct: 608 EMVYESRAGDVFVLGATSWRIEDITADRVLVSPAPGQPGKLPFWHGDNAGRPAELGRAIG 667 Query: 637 DFLHLLA------------DGAFFSGTIPPWLAEENTIANI---QGLIEEQRNATGIVPG 681 FL ++ G P AE A G E G PG Sbjct: 668 AFLREMSGAGSGAGPGSGRKGGLARDAARPGSAEPGDPAGDGTRPGPGREDPARDGGKPG 727 Query: 682 S-------RHLVLERCR----DE-------------------IGDWRIIL----HSPYGR 707 S R +ER R DE + D R +L H G Sbjct: 728 SAGQDDPARDGAMERIRAAGLDEFAAANLLSYLAEQRQATGYVPDDRTLLVERFHDELGD 787 Query: 708 ---RVHEP--------WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL 756 VH P WA+AI R+ +G D V SDDGIV RIPDT P + + + Sbjct: 788 WRVVVHSPYGARVHAPWALAIGRRLRERYGVDVQAVHSDDGIVLRIPDTLSG-PPSDVAV 846 Query: 757 FEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQ 816 F+ E++ QIV E +G SALFAARFRECA R+LL+P RTPG RTPLWQQR RAS LL +A Sbjct: 847 FDAEEIEQIVTEELGGSALFAARFRECAGRSLLLPRRTPGKRTPLWQQRQRASHLLNVAG 906 Query: 817 GYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVA 876 Y FPV+LET+RECLQDV+D+P L RLMR ++ +++ +V T+ SPFA SLLF YV Sbjct: 907 RYGSFPVVLETMRECLQDVFDVPGLIRLMRDISARRVRLVEVETSQASPFAASLLFNYVG 966 Query: 877 EFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAK 936 FMY+ DAPLAERRA L+LD+ LL LLGQ D ELLDP VI E EL RL R + Sbjct: 967 AFMYEGDAPLAERRAQALALDTSLLAELLGQADLRELLDPDVIADTERELARL--DRPLR 1024 Query: 937 GEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDD 996 E L DLLR GP+ D++ R E ++L L + +R ++GQE+ A ++D Sbjct: 1025 DAEDLADLLRSHGPLLAADVSLR-----EGDPAWLTGLESARRAIRVRVAGQEQWAAIED 1079 Query: 997 AARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEE 1056 AARLRDALGV LP +P +L V PL DL R+ R A A F LG A+V + Sbjct: 1080 AARLRDALGVPLPVGVPHTFLEPVDDPLGDLVARHARTRTPFPASTAAARFGLGPAVVTD 1139 Query: 1057 QLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLE 1110 L++L G V++ + + W V R LR RSL R+ PV+ T A Sbjct: 1140 TLRRLAVSGRVVSGEFRPGGRGEEWCDAGVLRMLRRRSLARLRKEVEPVSPETLAVFAPA 1199 Query: 1111 RQGVLPATD-GSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 G+ A G P +D ++ +EQL G +PAS E+ +LP+RV Y Sbjct: 1200 WHGISGAPQRGRPP------------IDALVSAVEQLQGAAVPASALETLVLPSRVPGYD 1247 Query: 1170 SEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAV 1229 +LDEL ++G V+W+GQ L DG VAL+ + A + + + L +A++ V Sbjct: 1248 PSLLDELTSSGEVLWAGQGSLPGGDGWVALYFADTA--PLLMPDPVEITMTPLHEAVLEV 1305 Query: 1230 LADGGAWFAQQISQRIRDKIGESV-DLSALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 L+ GGA F ++++ R+ + V D L A+W LVW G IT D APLRA + Sbjct: 1306 LSGGGALFFRELAGRVGSLMAGPVPDDGMLTAAVWDLVWAGRITGDTLAPLRATLGTGRP 1365 Query: 1289 ARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLD 1348 A R V P S P + GRW LL + T+R A AE +L+ Sbjct: 1366 AHRPATTRRRRP---------VLPTRS-GPPTVGGRWWLLPGVADDPTQRAHAQAEALLE 1415 Query: 1349 RYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRD 1408 R+G+++R AV AE +PGGF ++ + R+ E+SGR RG FVEGLGGAQFA +DR+R Sbjct: 1416 RHGVVTRGAVAAERLPGGFAAVYQVLRAFEESGRCRRGYFVEGLGGAQFALPGAVDRMR- 1474 Query: 1409 LATQATQTRHYTP-----------------VALSANDPANVWGNLLPWPAHPATLV--PT 1449 AT R P V L+A DPAN +G LPWPAHP + P Sbjct: 1475 --AAATPPRSEAPGPDPWSSRRPEGNGRRAVVLAAADPANPYGAALPWPAHPGEISHKPG 1532 Query: 1450 RRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEV 1509 R+AG+LVV+ G L+LY+ +GGK +L + + ++ L P V AL A+R + T+ Sbjct: 1533 RKAGSLVVLVDGHLVLYVERGGKTLLSFTD-DDRLQPAV-DALALAVRDGALGKLTVERA 1590 Query: 1510 NDLPVRQTPMFTLLREAGFSSSPQGL 1535 + + +P+ L AGF +P+GL Sbjct: 1591 DGTAINDSPLGAALEAAGFHPTPRGL 1616 >UniRef50_D1C082 DEAD/H associated domain protein n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1C082_XYLCX Length = 1632 Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 733/1660 (44%), Positives = 950/1660 (57%), Gaps = 175/1660 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D PATRDWF AF+ PTA Q W + +HALV+APTGSGKTLAAFL+A+DRL E Sbjct: 6 DRLGPATRDWFAGAFEGPTAAQDGAWDAIGQCKHALVVAPTGSGKTLAAFLWAIDRLHHE 65 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + R+LY+SP+KAL DVQRNL+ PL GI R G + VG+RT Sbjct: 66 -----PVPERARRCRVLYVSPLKALAADVQRNLRSPLTGIRQAAARAGIETPEIAVGMRT 120 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP ER PPD+L+TTPESL+L+LTS+AR L GVETVI+DE+HAVAG+KRGAH Sbjct: 121 GDTPPSERRSFATRPPDVLVTTPESLFLVLTSQARAGLLGVETVILDEIHAVAGTKRGAH 180 Query: 193 LALSLERLDALLHTS----AQRIGLSATVRSASDVAAFLGGDRP-------VTVVNPPAM 241 LALSLERLDALL S AQR+GLSATVR VA FLGG R V VV PPA Sbjct: 181 LALSLERLDALLVASGSRPAQRVGLSATVRPVEVVAQFLGGHRTADDGGREVVVVQPPAT 240 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAG--------------REGSIWPYIETGILD 287 + I +VVPV ++ D+ +V G D AG R S+WP++E ++D Sbjct: 241 KRWAIDVVVPVPDLADLDAVGQPGGSDDDAGPGAPDLTGDAASPLRRASVWPHVEERVVD 300 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVD------AAHFESTSGATS 341 V HRST+VFTNSR AE+LT+R+NEL++ RL AVD A SG Sbjct: 301 LVAGHRSTLVFTNSRRGAERLTSRMNELWSQRLGE----AVDDQGATWPAAAPGQSGTAV 356 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 R ++V +AR+HHGS+S+ +R TE LK G L VVATSSLELGIDMGAVDLV+QV Sbjct: 357 GRSPDAEV-LARAHHGSMSRAERTRTESELKEGRLPAVVATSSLELGIDMGAVDLVVQVG 415 Query: 402 TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 P SVASGLQRIGRAGHQVG VS G+ FP R DLV +AV+ + M AG +E L P NPL Sbjct: 416 APPSVASGLQRIGRAGHQVGAVSHGVVFPTHRGDLVPAAVVAQRMRAGEIEPLHVPANPL 475 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 DVLAQQ VAA A D E + RRA P+ L ++A LDML+GRYPS DF+ R Sbjct: 476 DVLAQQVVAALATDDWDAAELLATFRRAHPYAHLGDATWNAVLDMLAGRYPSEDFAELRA 535 Query: 522 KLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA--GSRRVGELDEEMV 579 ++VW+R T L+ RPGA LA TSGGTIPDRG+Y V L EE A G +RVGELDEEMV Sbjct: 536 RIVWDRATDRLSGRPGALRLAATSGGTIPDRGLYGVYLAGSEEGAQRGGKRVGELDEEMV 595 Query: 580 YESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL 639 YESRV D TLG+++WRI+ IT D+V+V+PAPG RLPFW+G+ GRP ELG +G F+ Sbjct: 596 YESRVGDTFTLGSSTWRIEDITPDRVLVSPAPGLPGRLPFWKGDAQGRPVELGRAMGAFV 655 Query: 640 HLL-------ADGA------FFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLV 686 + DGA + W A+ N+ + EQR ATG +P R +V Sbjct: 656 RTIDTELAAGPDGADAGRARLREAGLDAWAAD-----NLAAYLTEQRTATGRLPDDRTIV 710 Query: 687 LERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD-- 744 +ER RDE+GDWR+++HSP+G RVH PW++ +AGR+ A +G D +V+ SDDGIV R+PD Sbjct: 711 VERFRDELGDWRVVVHSPFGARVHAPWSLVLAGRLRARYGLDVAVMHSDDGIVLRLPDSG 770 Query: 745 ---------------------TDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 +D + A L +P+ ++ VR+ +GSS LFAARFRE Sbjct: 771 AGWDDLGAAPTWADGGPGGAGSDAPIVTAEDLLVDPDDVVGAVRDELGSSVLFAARFREA 830 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALER 843 +ARALL+P R P R PLWQQR RA+QLL++A +PDFP+ LE RECLQD +D+ AL Sbjct: 831 SARALLLPRRRPDRRQPLWQQRQRAAQLLQVAAQFPDFPMTLEAARECLQDDFDVAALAA 890 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN 903 LM L G ++I +V T TPSPFA SLLFGY A+F+Y DAPLAERRA+ LSLD +LL Sbjct: 891 LMGDLGAGRVRIVEVATQTPSPFAQSLLFGYTAQFLYDGDAPLAERRAAALSLDPDLLAE 950 Query: 904 LLGQVDPG-----ELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQ 958 LLG D G +LLDP + + E ELQ LAP R+AK EGL+D+LR GP + L Sbjct: 951 LLG--DQGATAIADLLDPAAVERTESELQALAPDRQAKDAEGLWDVLRRTGPHPLAALEA 1008 Query: 959 RHTGSSE-EVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYL 1017 R + +V +L L +R+ +G E+ A ++DA RLRDALGV LP +PE Sbjct: 1009 RTREEARGQVPDWLAELERARRLIRVRFAGAEQWAVVEDAGRLRDALGVALPVGVPETLT 1068 Query: 1018 HRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLV---------M 1068 V L DL R++R H V A +A + LG+A+V L +L+ G V + Sbjct: 1069 ELVPDALGDLVRRHVRTHGPVAAADVAARYGLGVAVVLHALARLQAAGTVVRGALRPSSL 1128 Query: 1069 NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 D W EV R LR RSL A R PV L Q V Sbjct: 1129 GGTGDEWCDPEVLRTLRRRSLAALRAEVEPVEPQALGVFLPRWQQV-------------G 1175 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 SP GVDGV+R +EQLAG +PAS E+ +LPARV YS +LDEL G V+W G Sbjct: 1176 SPAAPRGVDGVLRAVEQLAGAAVPASALETLVLPARVPGYSPALLDELTTAGEVLWCGHA 1235 Query: 1189 KL---GEDDGLVALHLQEYAAESF---TPAEADQANRSALQQAIVAVLADGGAWFAQQIS 1242 +L G DG+V+LHL + AA + P E + L +A++ +L G +F +++ Sbjct: 1236 RLPGSGGGDGMVSLHLADGAALTLRPPDPVEPGGPLDTPLHRAVLDLLTGSGGFFLPRLA 1295 Query: 1243 QRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA----------RTS 1292 + +VD+ LW LVW G +T+D PLR + + Sbjct: 1296 ELAGTSASATVDV------LWDLVWAGRVTNDGLGPLREAVGTGAGGAHRAPRAPARARP 1349 Query: 1293 TRRSHRARRGRPVYA-QPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYG 1351 R+ GRP + PVS T GRWS L + T R AL + +L+R+G Sbjct: 1350 VSRTRFGGLGRPASSGSPVSAAAVVRTGG--GRWSALPDVERDPTIRAHALTQVLLERHG 1407 Query: 1352 IISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR---- 1407 +++R +E G F + + R +E+ G + RG FVEGLGG+QFA +D+LR Sbjct: 1408 VLTRAVAPSEGAAGAFRDVYRVLRELEERGAVRRGYFVEGLGGSQFALPGAVDQLRTDAA 1467 Query: 1408 ----------DLATQAT-----------QTRHYTPVALSANDPANVWGNLLPWP---AHP 1443 D+A A+ TR + L+A DPAN +G L WP Sbjct: 1468 DRSRAHESDDDVARPASAPGRGSTRPGGDTRPPEALLLAATDPANPYGAALAWPRTGGAS 1527 Query: 1444 ATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEV--FHALTTALRREPR 1501 + P R+AGA+VV+ G L+LY+ +GG+ +L + A A R Sbjct: 1528 SVHRPGRKAGAVVVLVDGDLVLYVERGGRTVLSFAPPGPGGARRTGAAARELAAAASSGR 1587 Query: 1502 L-RFTLTEVNDLPV-----RQTPMFTLLREAGFSSSPQGL 1535 L R + V+ +P +TP L +AGF+ +P+GL Sbjct: 1588 LGRVLIQRVDGVPALTAARDRTPAAAALLDAGFAVTPRGL 1627 >UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinomycetales RepID=C6W9K2_ACTMD Length = 1606 Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 713/1442 (49%), Positives = 899/1442 (62%), Gaps = 75/1442 (5%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FSPATR WF AF PTA Q W AA E+ALVIAPTGSGKTLAAFL+ALDRL +E Sbjct: 5 FSPATRQWFAGAFAAPTAAQAGAWEAAAAGENALVIAPTGSGKTLAAFLWALDRLAQEPP 64 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 D R+ R+LY+SP+KAL DV+RNL+ PL GI RR G E + VG+RTGD Sbjct: 65 PD----EPRERCRVLYVSPLKALAVDVERNLRAPLAGIRQASRRLGLPEPAIEVGMRTGD 120 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA R R PPD+L+TTPESL+L+LTS ARE+LRGV TVI+DEVHAVAG+KRGAHLA Sbjct: 121 TPADVRRAFARKPPDVLVTTPESLFLVLTSAARESLRGVRTVILDEVHAVAGTKRGAHLA 180 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL AQRIGLSATVR +V+AFL G RPV VV P + + ++R+ VPV Sbjct: 181 LSLERLDGLLERPAQRIGLSATVRPVEEVSAFLAGGRPVRVVQPESAKTIEVRVEVPV-- 238 Query: 255 MDDVSSVASGTGE--DSHAG--REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 +D+S++ TGE S AG R SIWP +E +L+ V HRSTIVF NSR LAE+LTA Sbjct: 239 -EDMSALGEPTGEVSGSAAGGERRTSIWPAVEQRVLELVREHRSTIVFANSRRLAERLTA 297 Query: 311 RLNELYAARLQRSPSIAVD------------------AAHFESTSGATSNRVQSSDVFIA 352 RLNEL A + A A F + + S IA Sbjct: 298 RLNELAAEAAEGGGPGADGPGADGLGEGAGQGGSGSAVARFPAAAVGQSGVTVQEGPVIA 357 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 R+HHGS+S+EQR E+ LKSG L CVVATSSLELGIDMGAVDLV+QV P +VASGLQR Sbjct: 358 RAHHGSMSREQRTSVEEELKSGRLPCVVATSSLELGIDMGAVDLVVQVEAPPTVASGLQR 417 Query: 413 IGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 +GRAGHQVG VS+G+ FP+ R DLV AV+ E M G +E + P NPLDVLAQ VA Sbjct: 418 VGRAGHQVGAVSRGVVFPKFRGDLVSCAVVAERMRDGAIEAVRYPRNPLDVLAQHVVAMV 477 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL 532 A++ V++ VR AAP+ LP A LDML+GRYPS +F RP++ W+R TG L Sbjct: 478 ALEPWSVEDLARVVRGAAPFAGLPESALLAVLDMLAGRYPSEEFGELRPRITWDRVTGEL 537 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 RPGAQ LAVTSGGTIPDRG+++V+ P E K GS RVGELDEEMVYESRV D LG Sbjct: 538 RGRPGAQRLAVTSGGTIPDRGLFAVMTPASESKPGS-RVGELDEEMVYESRVGDTFLLGT 596 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL-------ADG 645 +SWR++ IT D+V+V PAPG+ AR+PFW+G+ GRP ELG +G FL + A G Sbjct: 597 SSWRVEDITHDRVVVVPAPGQPARMPFWKGDAPGRPLELGRALGRFLREVSALPEPEAVG 656 Query: 646 AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY 705 + + W AN+ ++EQR ATG VP R +++ER RDE+GDWR+++HSP+ Sbjct: 657 RAAAAGLDEW-----ATANLLTYLKEQREATGHVPSDRAVLVERFRDELGDWRLVVHSPF 711 Query: 706 GRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD-TDGK----LPDAAIFLFEPE 760 G +V+ PWA+AI R+ G DA V SDDGIV R+PD D + + A L +P+ Sbjct: 712 GAQVNAPWALAIGARLRERRGVDAQVAHSDDGIVVRLPDAVDAEGGQAVAGAEDVLLDPD 771 Query: 761 KLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPD 820 ++ Q+V VG SALFAARFRECAAR+LL+P R P RTPLWQQR RA+QLL +A Y Sbjct: 772 EVEQVVVAEVGGSALFAARFRECAARSLLLPRRDPRRRTPLWQQRQRAAQLLSVASKYES 831 Query: 821 FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMY 880 FPV+LE +RECLQDVYD+P L LM + +++ +V T +PSPFA SLLFGYV F+Y Sbjct: 832 FPVVLEAMRECLQDVYDVPGLRELMADVRARRVRVVEVETPSPSPFARSLLFGYVGMFLY 891 Query: 881 QSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEG 940 ++D PLAERRA+ LSLDS LL LLG ELLDP+V+ +VE LQRLAP R A+ EG Sbjct: 892 EADTPLAERRAAALSLDSALLAELLGSEAIRELLDPEVLEEVERALQRLAPDRHARDAEG 951 Query: 941 LFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARL 1000 DLLR LG ++ E+ A+R G E +L L+A +R I+G ER+ ++DA R+ Sbjct: 952 AADLLRFLGDLSEEEAAER--GVRPE---WLTELVAARRAIRVRIAGHERVITIEDAGRV 1006 Query: 1001 RDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQ 1060 RDALGV LP +PE++ V+ PL DL RY R H A Q A F LG+A+V L++ Sbjct: 1007 RDALGVALPVGVPEVFTEPVADPLGDLLGRYARTHGPFPAGQAAERFGLGVAVVTGVLER 1066 Query: 1061 LREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGV 1114 + G ++ + + EV RRLR SL R PV R L GV Sbjct: 1067 MAATGRLVRGELRPGGTHTEYCDAEVLRRLRRSSLARLRSEVEPVEPAALGRFLPGWHGV 1126 Query: 1115 LPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLD 1174 G+P D V V+EQLAG LPAS ES +LPAR+ Y +LD Sbjct: 1127 GRRVRGAPT------------ADDVYAVVEQLAGAPLPASAVESLLLPARLPGYHPALLD 1174 Query: 1175 ELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGG 1234 EL A G V W+G L DG VAL + A + A S L A+V LA GG Sbjct: 1175 ELTAAGEVTWTGCGALAGGDGWVALAPTDVADLLLPDLVPESAPESPLHTAVVEALA-GG 1233 Query: 1235 AWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTR 1294 A F +Q+ R+ + G + D + ALW LVW G++T+D APLRAL S A R Sbjct: 1234 ALFFRQVVDRVALQ-GPTTDQEVVG-ALWDLVWAGLVTNDTLAPLRALV-SGGGAHKPKR 1290 Query: 1295 RSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIIS 1354 + R R R +P P + P +AGRWSL V + T R A AE L+R+G+++ Sbjct: 1291 TTPRGRYARMRATRPDMPSRT-GPPTVAGRWSLAVVPSPDPTRRAHARAEAFLERHGVLT 1349 Query: 1355 RQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQAT 1414 R A+ E + GGF ++ + R+ME+SG+++RG VEGLG AQFA R +DRLR L+ Sbjct: 1350 RGALDTERVTGGFSAVYRVLRAMEESGQVVRGYVVEGLGAAQFAARGAVDRLRALSAPPD 1409 Query: 1415 QT 1416 +T Sbjct: 1410 RT 1411 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 1420 TPVALSANDPANVWGNLLPWPAH--PATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVW 1477 T V L+A DPA +G L WP P R+AGAL V+ G+ +LY+ +GGK +L + Sbjct: 1486 TTVVLAAADPAQPYGAALSWPEQVGGGKHRPGRKAGALAVLVDGEAVLYVERGGKSLLSF 1545 Query: 1478 QEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 E++E L L A+R + ++ + + + +L+EAGF ++P+GL Sbjct: 1546 TEEDEPLR-AAAQGLGRAVRDGWLGQLSVQRADGEVALGSKLAGVLQEAGFRATPKGL 1602 >UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRE7_HALO1 Length = 1523 Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 703/1584 (44%), Positives = 925/1584 (58%), Gaps = 131/1584 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF AF PT VQ Q W A ++AL+IAPTGSGKTLAAFL+ +DRL G Sbjct: 4 FGPATEAWFSSAFAAPTKVQEQGWARIAAGDNALLIAPTGSGKTLAAFLWCIDRLSLPG- 62 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL-RVGIRTG 133 RE + R++Y+SP+KAL DV+RNL+ PL GIA R G +V L V +RTG Sbjct: 63 ---REERRTPGVRVVYVSPLKALVYDVERNLRAPLAGIARAAEREG-IDVRLPSVAVRTG 118 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT ++ER R+P +ILITTPESLYL+LTS+ARETLR ET+++DEVHA+A SKRGAHL Sbjct: 119 DTSSKERRTQLRHPAEILITTPESLYLLLTSQARETLRSCETIVVDEVHALAPSKRGAHL 178 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN---PPAMRHPQIRIVV 250 ALSLERL L QRIGLSAT ++VA +LGGDRPV++V+ PPA+ + IVV Sbjct: 179 ALSLERLAHLAARDPQRIGLSATATPLAEVARYLGGDRPVSIVDTAAPPAL---DLEIVV 235 Query: 251 PVANM----DDV---------------SSVASG-------TGEDSHAGREGSIWPYIETG 284 PVA+M D + SS+ G G S E +WP I Sbjct: 236 PVADMTRPEDSLPAAAAGSGRGAFGVDSSLGPGRPLGAEAEGASSDNRPERGMWPAIYPR 295 Query: 285 ILDEVLRHRSTIVFTNSRGLAEKLTARLNEL-------YAARLQRSPSIAVDAAHFESTS 337 +L + HR+TIVF NSRGL E+LT RLNEL AA R A + S Sbjct: 296 LLQLIDEHRTTIVFVNSRGLCERLTHRLNELAEDLAAERAAERARESGAAENGQASRSKG 355 Query: 338 GATSNRV--QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVD 395 G TS Q+ I RSHHGS++ +R E+ALKSG +R +VATSSLELGIDMGAVD Sbjct: 356 GQTSGSPAGQAPGTSIVRSHHGSLAHSERTQVEEALKSGAIRAIVATSSLELGIDMGAVD 415 Query: 396 LVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLT 455 LV+ V +P SVASGLQRIGRAGH VG SKG FP+ R DL+++AV+ M AG +E+L Sbjct: 416 LVVLVESPSSVASGLQRIGRAGHGVGETSKGRLFPKHRGDLLEAAVVSSRMMAGAIESLR 475 Query: 456 PPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGD 515 P NPLDVLAQQ VA A++ QVD + VRRAA +++LP+ LDM+SGRYPS D Sbjct: 476 VPKNPLDVLAQQIVAMVAIEPWQVDALAAVVRRAAGFRELPQDALIGVLDMVSGRYPSHD 535 Query: 516 FSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELD 575 F+ P++VW+R++ L+AR GA+ LA+ SGGTIPDRG Y V L GE+ RVGELD Sbjct: 536 FADLIPRVVWDRQSDELSARRGAKTLALLSGGTIPDRGTYGVYL--GEDGP---RVGELD 590 Query: 576 EEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMI 635 EEMV+E TLGAT+WR+++ITRD+V VTPAPG LPFWRG+G GRP ELG + Sbjct: 591 EEMVHEITPGQTFTLGATTWRVERITRDRVQVTPAPGEVGMLPFWRGDGPGRPLELGRAM 650 Query: 636 GDFLHLLA-------DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLE 688 G F+ LA S A +N +A++ G QR ATG++P R +V+E Sbjct: 651 GAFVRELAALPEEQAHARLVSEFRLDAWAADNLLAHLGG----QREATGVLPTDRTIVVE 706 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 R RDE+GD+R+ + SP+G RVH PWA+AI R+ G + + SDDGIV R+ DG Sbjct: 707 RFRDELGDFRVCILSPFGSRVHAPWALAIEARLSQRAGFEVQTLWSDDGIVLRMQTEDG- 765 Query: 749 LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA 808 LPDA + L EPE++ +V E +G SALFA +FRE AARALLMP R PG RTPLW QRL+A Sbjct: 766 LPDAELLLPEPEEVEDLVIEQLGGSALFAGQFRENAARALLMPRRRPGQRTPLWVQRLKA 825 Query: 809 SQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFAT 868 +LL +A+ YP FP+++ET R CLQDV+DLPAL L+ + E+++ + T PSPF+ Sbjct: 826 QELLAVARSYPAFPIVMETYRACLQDVFDLPALSELLGAIRRREVRVELIETDAPSPFSR 885 Query: 869 SLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQR 928 SL+F YVA ++Y+ DAPLAERRA LSLD +LLR LLGQ D LLD VI ++E ELQ Sbjct: 886 SLVFAYVAAYLYEGDAPLAERRAQALSLDRQLLRELLGQEDLRALLDAAVIDELEAELQA 945 Query: 929 LAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQ 988 L RR + + L DLLR LG + ++L R V L L +RI + G+ Sbjct: 946 LDDSRRPRHVDALSDLLRRLGELDDDELRARWDAREMPVEDALAELQRARRIARLRVGGR 1005 Query: 989 ERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFS 1048 R M+D RDALG P +PE++L V+ P+ L R+ R ++ Q+A ++ Sbjct: 1006 ARWVAMEDMGLYRDALGAAPPPGVPEVFLEPVAAPVETLLGRFARTRGPFSSAQVAARYA 1065 Query: 1049 LGIAIVEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAAT 1102 L A V+ L L QG ++ D W EV RR++ R+L R PV + Sbjct: 1066 LPPAQVDALLGALAGQGKLLRGAFRPGATGDEWCEPEVLRRIKRRTLAKLRSEVAPVDSA 1125 Query: 1103 TYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGV-GLPASL--WESQ 1159 R FA GV EG G R+ E LA + GLP SL ES Sbjct: 1126 ILGR------------------FAPAWHGVGEGGRGSRRLGEVLAQLEGLPMSLHELESA 1167 Query: 1160 ILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANR 1219 ILPARV D++ MLDEL A G+++W G LG DG +AL+ ++ A P E + Sbjct: 1168 ILPARVSDFAPRMLDELGAMGSLVWVGHGALGTRDGKIALYRRDRVAALLPPPEEPEELG 1227 Query: 1220 SALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPL 1279 +Q + + G ++F +S E L EAL L W G++T+D + PL Sbjct: 1228 PLHRQILDHLSERGASFFVALLSACAPASTPE------LLEALGDLAWAGLVTNDTFQPL 1281 Query: 1280 RALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSL---LQVEPLNDT 1336 R L R + S RR+ +T +GRWSL L ++T Sbjct: 1282 RLLGRVRAGG--SKRRARE------------------STSAASGRWSLVRELLAGAPSET 1321 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 E A +L+R+GI+SR+ E +PGGF ++ + R+ME+SG++ RG FVEGLGGAQ Sbjct: 1322 ECAHRRALTLLERHGIVSREVAAIEPLPGGFSAIYQVLRAMEESGKVRRGYFVEGLGGAQ 1381 Query: 1397 FAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAH--PATLVPTRRAGA 1454 FA +DRLR L P+ L+A DPAN +G +LPWPAH P R AGA Sbjct: 1382 FAFPGAVDRLRGLRGDDGG----DPLVLAAADPANPYGWMLPWPAHGDEGAQGPRRVAGA 1437 Query: 1455 LVVVSGGKLLLYLAQGGKKMLVWQ---EKEELLAPEVFHALTTALRREPRLRFTLTEVND 1511 VV+ GG+L+L+L +G +++L + ++E L+ A+ RR LR + ++ Sbjct: 1438 RVVLCGGELVLFLDKGCRRLLSFPAAGDRERLIQAGRALAVVAGKRRGKMLR--VESIDG 1495 Query: 1512 LPVRQTPMFTLLREAGFSSSPQGL 1535 R P L+ AGF + +GL Sbjct: 1496 ASARTAPQAETLQAAGFYADARGL 1519 >UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7I8_ACIC5 Length = 1565 Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust. Identities = 668/1610 (41%), Positives = 906/1610 (56%), Gaps = 171/1610 (10%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P T +WF F PTA Q W AR E L+ APTG+GKTL AFL+ LDRL Sbjct: 23 LFHPVTAEWFRAVFDHPTAPQRMGWPAIARGESTLIFAPTGTGKTLTAFLWCLDRLMLHA 82 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + RILYISP+K+L DV+RNLQ PL GIA RR + IRTG Sbjct: 83 PP------MEEGCRILYISPLKSLAVDVERNLQSPLAGIAATAARRNVPVHMPEIAIRTG 136 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT +ERS+ R+P +ILITTPESLYL+LTS A +LR VETVI+DE+HA+ +KRGAHL Sbjct: 137 DTAQRERSRFRRHPAEILITTPESLYLLLTSEAAASLRTVETVILDEIHALVPTKRGAHL 196 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD----------------------- 230 ALSLERL+A+ QRIGLSAT R +VA FL G Sbjct: 197 ALSLERLEAITQKPLQRIGLSATQRPLEEVAHFLAGAESQPSTAADETAPAHEWTTNDER 256 Query: 231 ----RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS-GTGEDSHAGREGSIWPYIETGI 285 RPVT+V + +R+ VPV +M + +G S + SIW I + Sbjct: 257 PHLFRPVTIVQANEPKQLNLRVEVPVEDMARLGQPEELPSGAASQGPKRTSIWSAIHPRL 316 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ 345 ++ + +ST++F NSR LAE+L A LNE+ L Sbjct: 317 VEIIRERQSTLLFVNSRRLAERLAAALNEIAGEPL------------------------- 351 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS 405 AR+HHGS++ QRA E ALK+G LR +VATSSLELGIDMGA+DLVIQ+ P S Sbjct: 352 ------ARAHHGSLAAAQRAEIEDALKAGRLRALVATSSLELGIDMGAIDLVIQIEAPPS 405 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLA 465 VASG+QRIGRAGH VG S G+ FP+ R DL+ A + M +E+ NPLDVLA Sbjct: 406 VASGMQRIGRAGHSVGLPSDGIIFPKYRADLIACAAVTRAMHERLVESTRYLRNPLDVLA 465 Query: 466 QQTVAAAAMDA----------------LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG 509 QQ VA A + V++ ++ +RRAAP+ L R F+ LD+L+G Sbjct: 466 QQIVATVAHPPAAARPRAKGQPPFEPHIAVEDIFTLLRRAAPFASLSRTAFEGVLDLLAG 525 Query: 510 RYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR 569 RYPS +FS RP++ W+R + ILT R GA+ LA+ +GGTIPDRG+Y V L ++ Sbjct: 526 RYPSDEFSELRPRITWDRVSNILTPREGAKSLAILNGGTIPDRGLYGVFLARSDKPV--- 582 Query: 570 RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPA 629 RVGELDEEMV+ESR D LGA++WRI++I D+V+V+PAPG ++PFW G+ GRP Sbjct: 583 RVGELDEEMVFESRTGDTFLLGASTWRIEEILPDRVLVSPAPGEPGKMPFWHGDAAGRPL 642 Query: 630 ELGEMIGDF---LHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLV 686 E G IG L L A S + + N+ + +Q AT VP R+LV Sbjct: 643 EFGRRIGALIRELRALPRNAAISRLVREHDLDTLAAENLLRFLADQEIATVTVPDDRNLV 702 Query: 687 LERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTD 746 +ER RDE+GDWR+ + +P+G VH PWA+A+AGRI A G D + DDG V R PDTD Sbjct: 703 IERTRDELGDWRVCVLTPFGSSVHAPWAMAVAGRIRAAGGPDVETMWGDDGFVLRFPDTD 762 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 PDA + L EP + +V +GS+ALFAA+FRE AARALL+P R R PLWQQR Sbjct: 763 TP-PDADLLLLEPAEAADLVLRQLGSTALFAAKFRESAARALLLPRRRAQGRAPLWQQRK 821 Query: 807 RASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPF 866 RA LL +A YP FP++LE REC++DV+D+P+ +R + ++++ V T TPSPF Sbjct: 822 RAYDLLSVASKYPAFPMLLEAYRECMRDVFDMPSFLETLRAIQKRDVRVHVVDTRTPSPF 881 Query: 867 ATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEEL 926 A+SLLF YVA ++Y DAPLAERRA LS+D + LR LLG D ELLD I+QVEE+L Sbjct: 882 ASSLLFSYVANYIYDGDAPLAERRAQALSIDQDQLRELLGDSDLRELLDADAIQQVEEQL 941 Query: 927 QRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMIS 986 Q L G RA+ +G+ DLL LG ++ E+LA+R ++ ++ + L+ LL +RI I+ Sbjct: 942 QCLEEGHRARSADGIHDLLLRLGDLSREELARRL--ATPDLLAVLDRLLKARRILEVKIA 999 Query: 987 GQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHE 1046 + RL ++DAAR RDALG+ LP + + L V P+ +L R+ R H T + A Sbjct: 1000 SERRLIAVEDAARYRDALGIPLPPGIAKALLATVEKPVLELIRRFARTHGPFTLAEAAQR 1059 Query: 1047 FSLGIAIVEEQLQQLREQGLVMN-------LQQDIWVSDEVFRRLRLRSLQAAREATRPV 1099 F L VE L+ L +G V+ L ++ W EV R +R ++L R+ PV Sbjct: 1060 FGLDARAVESVLRTLALEGRVLEGGFRPGGLHRE-WCDAEVLRLIRRKALSRLRKEIEPV 1118 Query: 1100 AATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQ 1159 ARL QG+L G+D ++ IE L G +PASL ES Sbjct: 1119 EQQMLARLETHWQGIL---------------QRRRGLDALLDTIESLQGAPIPASLLESS 1163 Query: 1160 ILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEA---DQ 1216 ILPAR+ Y+ LD L+A G V W G LGE DG +AL+L + + P A D Sbjct: 1164 ILPARLARYAPADLDTLIAAGEVTWCGLDSLGEHDGRIALYLADRMPQ-LLPTRAVTIDA 1222 Query: 1217 ANRSAL-QQAIVAVLADGGAWFAQQISQRIRDKI-GESVDLSALQEALWALVWQGVITSD 1274 A+ +A +Q I+ LA GGA F Q+ + + GE++D ALW LVW+G++T+D Sbjct: 1223 ASPTAAREQLILDQLASGGAIFFAQLHEAVGGGFPGETLD------ALWNLVWRGLVTND 1276 Query: 1275 IWAPLRALTRSSSNARTSTRR----SHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL-- 1328 LRA SS +R++ R+ S R+RR P AQ GRWSL+ Sbjct: 1277 ALHALRAYVTKSSTSRSAKRQHNVPSFRSRRTVPPTAQ--------------GRWSLVPM 1322 Query: 1329 --QVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRG 1386 + TE A+A +L RYG+++R++V EN+PGGF ++ + +++E+SGRI RG Sbjct: 1323 AERTTSAQQTEWSHAIAHQLLHRYGVLTRESVAQENLPGGFSAIYDVLKALEESGRIRRG 1382 Query: 1387 RFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP------ 1440 FV GLG AQFA +D LR L A + V+++A DPAN++G++L WP Sbjct: 1383 YFVAGLGAAQFALPAAVDLLRSL-RNAPEPESAEIVSIAATDPANLYGSVLRWPQPAPEE 1441 Query: 1441 ----AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEEL--------LAPEV 1488 + P TL TR GA V++ G+L+ YL + + V+ +E LA + Sbjct: 1442 QGSDSSPRTL--TRTLGASVILRNGELIAYLRRSNPNVQVFLPAQEPDRTHVARDLAQFL 1499 Query: 1489 FHALTTALRREPRLR---FTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 + LR E R ++ +N +PV+Q P+ L +AGFS +P G Sbjct: 1500 ASQVQQQLRDEEARRHGGLLISTINGVPVQQHPLARFLSDAGFSPAPLGF 1549 >UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3F9_JONDD Length = 1618 Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/1576 (42%), Positives = 909/1576 (57%), Gaps = 152/1576 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T +WF AF +PTA Q W AR HA+V+APTGSGKTLAAFL+A+D++ Sbjct: 4 LFSTPTVEWFTGAFDEPTAAQWGAWDAIARDHHAVVVAPTGSGKTLAAFLWAIDKI---S 60 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + +LY+SP+KAL TDV+RNL+ PL+GI R G T ++VG+RTG Sbjct: 61 ARTQAPSSPLNRCSVLYVSPLKALATDVERNLRAPLRGIEQAIARTGGTPYTMQVGVRTG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTP ER + +PPDILITTPESL+LMLTS+AR L G++TVIIDEVH+VAG+KRGAHL Sbjct: 121 DTPPSERRRFGTHPPDILITTPESLFLMLTSQARSGLSGIDTVIIDEVHSVAGTKRGAHL 180 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR-------PVTVVNPPAMRHPQI 246 ++SLERLDA L A+RIGLSATV V+ +L G R PVTVV PP + I Sbjct: 181 SVSLERLDAFLERPARRIGLSATVEPVDAVSDWLAGGRSISDGGRPVTVVAPPVSKKFDI 240 Query: 247 RIVVPVANMDDVSSVA----SGTGEDSHAGR-EGSIWPYIETGILDEVLRHRSTIVFTNS 301 + VP+ +++D S +G+ + R S+WP++E I+D V +H +T+VFTN+ Sbjct: 241 SVEVPLEDLNDPQQTGEFDVSLSGDAAQEPRARASVWPHVEERIVDLVQQHTTTLVFTNA 300 Query: 302 RGLAEKLTARLNELYAARL-QRSPSI-AVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 R AE+LTAR+NE+ A R Q P ++ AA ++ SGA + D IAR+HHGS+ Sbjct: 301 RRGAERLTARMNEIAARRSGQDVPDAGSMHAAAIQAQSGAALD----VDHVIARAHHGSM 356 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 S+ +R+ TE LK+G L CVVATSSLELGIDMG++DLV+QV P S ASGLQR+GRAGH Sbjct: 357 SRSERSRTESDLKNGVLPCVVATSSLELGIDMGSIDLVVQVGPPPSAASGLQRVGRAGHS 416 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 VG VS+G FP R +LV +A+I + M LE L NPLDVLAQQ VA A+D Sbjct: 417 VGAVSRGRIFPVHRGELVPAAIIAQRMRTRTLEPLHRVANPLDVLAQQIVAMLAVDDWDK 476 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 DE ++ +RR+AP+ L F A LDML+GRYPS DF R ++VW+R T +LT RPGA Sbjct: 477 DELFTTIRRSAPFMGLGHATFVAVLDMLAGRYPSEDFGELRARIVWDRATNLLTGRPGAL 536 Query: 540 LLAVTSGGTIPDRGMYSVLLPE-----------------GEEKAGS------RRVGELDE 576 LA TSGGTIPDRG+Y V L + G +AG +RVGELDE Sbjct: 537 RLAATSGGTIPDRGLYGVFLVDSAAVSDGVVDTSVDDAPGVPRAGKVRLVGGKRVGELDE 596 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 EMVYESRV D+ TLG+++WRI++IT D+V+V+PAPG RLPFW+G+G GR LG IG Sbjct: 597 EMVYESRVGDVFTLGSSTWRIEEITPDRVLVSPAPGVPGRLPFWKGDGLGRSFSLGVAIG 656 Query: 637 DFLH---LLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDE 693 +L D A ++G +E +N++ + EQ ATG++P +V+ER RDE Sbjct: 657 QWLRRGRHDDDDAVWAGL------DERAASNLRSYLREQEEATGVLPTDDTIVVERFRDE 710 Query: 694 IGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIP------DTDG 747 +GDWR+++H+P+G RVH PWA+ I R+ +G D + + SDDGIV R+P D G Sbjct: 711 LGDWRVVIHTPFGARVHAPWALVIGARLRERYGFDTATMHSDDGIVIRLPAADDPYDVAG 770 Query: 748 KLPDAAI----------FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGH 797 + D A + + + +VRE V S+LFAARFRE A RALL+P P Sbjct: 771 AVSDGASENAGGVGFDDLMVAGDAVESLVREHVADSSLFAARFREAAGRALLLPRARPDR 830 Query: 798 RTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 R PLWQQR R++QLL +A +PDFP++LE +RECLQD YD+PAL +M R+ G +++ + Sbjct: 831 RQPLWQQRQRSAQLLSVAAQFPDFPIVLEAVRECLQDDYDVPALRSVMERVEEGTLRVVE 890 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGEL---L 914 VTT SPFA +LLFGY A+F+Y SDAPLAERRA+ L+LD LL LLG G+L L Sbjct: 891 VTTPRASPFAQTLLFGYTAQFIYDSDAPLAERRAAALTLDPTLLAELLGASGSGDLADLL 950 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEE-------- 966 D V+ + EL + RR + E ++D L+ GP+TVE L R G + Sbjct: 951 DEGVVEKTALELAGVG-DRRLRHAEDVWDFLQRWGPITVEGLGARWVGIDRDDLVQVDPH 1009 Query: 967 -------------------VASYLENLLAVKRIFPAMI---SG-QERLACMDDAARLRDA 1003 + L+ +R+FP + SG +E +A + DA RLRDA Sbjct: 1010 HLNRSVDALSCPDPRGVDWARDVVAELVQSRRVFPVRLMTRSGPREYVASIVDAGRLRDA 1069 Query: 1004 LGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLRE 1063 LGV +P + + + V PL D+ RY + H T + +A F +G A+V + +++L Sbjct: 1070 LGVAIPPGIADEWSAPVRDPLGDMVRRYAKTHVPFTVDDVAERFGVGRAVVFDVVRRLVA 1129 Query: 1064 QGLVMNLQ---------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGV 1114 G+V+ + D + +V R LR RSL A R PV +T A L + + Sbjct: 1130 SGVVVAGRLLPSTFGGVGDEYCDADVMRVLRRRSLAALRADVEPVVPSTLAVFLPQWHRL 1189 Query: 1115 LPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLD 1174 G GVDG +EQL G +P S E+ ILPARV Y E LD Sbjct: 1190 ----------------GELRGVDGTATALEQLVGAPIPVSTLEADILPARVVGYRPEFLD 1233 Query: 1175 ELLATGAVIWSGQKKL----GEDDGLVALHLQEYAAESFTPA-----EADQANRSALQQA 1225 EL+ G V+W G + L G DG+V+ H +A PA D ++ + Sbjct: 1234 ELMVGGEVMWVGHRSLSGLRGGRDGIVSFH-DPLSAHLTLPAVPPLQNNDDFVVESIHRD 1292 Query: 1226 IVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT-R 1284 + VL + G +FA Q++ ++ + L +ALW LVW G +T+D +APLRAL R Sbjct: 1293 VWEVLENSGGFFAHQLAAQL------GCSFTVLGDALWDLVWAGYVTNDSFAPLRALLGR 1346 Query: 1285 SSSNARTSTRRSHRARRGRPVYAQPVS---PRVSYNTPNLAGRWSLLQVEPLNDTERMLA 1341 + R+ + S R RR + Q S R+S + P L GRWS + + E + A Sbjct: 1347 QRAAPRSRSTASRRPRRLGSRFGQLASVNSDRLSEH-PTLVGRWSAVARPFVGREESLAA 1405 Query: 1342 LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERL 1401 +LDRYG+I+R + +E+ F + +E +G + RG FVE LGG+QFA L Sbjct: 1406 WTTVLLDRYGVITRSVLGSEDSGFRFTELYRALSHLETTGALRRGYFVEHLGGSQFAAPL 1465 Query: 1402 TIDRLR--DLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVS 1459 +D LR D A LS DPA +G+ L WP + PTRRAGA VV+ Sbjct: 1466 AVDALRVADTARSGGGPLPGETRLLSVWDPAQPYGSTLAWPDSFSVARPTRRAGAHVVIH 1525 Query: 1460 GGKLLLYLAQGGKKML 1475 G+ + Y+ G+ ++ Sbjct: 1526 RGECVCYVDHTGRSVV 1541 >UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317F9 Length = 1480 Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/1557 (44%), Positives = 907/1557 (58%), Gaps = 122/1557 (7%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F+PA RDWF RAF PT Q Q W A EH L+ APTGSGKTLAAFL+ALDRL + Sbjct: 8 DSFTPAVRDWFTRAFDAPTEAQAQAWPAIATGEHTLISAPTGSGKTLAAFLWALDRLAAD 67 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 D + + +R++Y+SP+KAL D++RNL+ PLKGIA E + V IRT Sbjct: 68 PLPD-----RERRTRLVYVSPLKALSYDIERNLRAPLKGIA--------PEGGISVAIRT 114 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP +ER+++ R PPD+LITTPESLYLMLTSRARE L G E VI+DE+HAVAGSKRGAH Sbjct: 115 GDTPQRERAQMLRTPPDVLITTPESLYLMLTSRAREILTGAEWVIVDEIHAVAGSKRGAH 174 Query: 193 LALSLERLDALL-----HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP-QI 246 +AL+LERLDAL+ QRIGLSAT +V F+ G R + +R P + Sbjct: 175 MALTLERLDALVGEHEGRAGVQRIGLSATQNPLEEVGRFMVGPRRRCRIVDTGVRKPLDL 234 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREG---SIWPYIETGILDEVLRHRSTIVFTNSRG 303 +I VPV +M + D AG E SIWP I +L V HRSTIVF N+R Sbjct: 235 QIHVPVESMVEPEQGTDVDPLDPVAGGEATRRSIWPAIYPELLRLVQDHRSTIVFVNNRR 294 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 AE+L RLNEL A + P++ IAR+HHGS+++E+ Sbjct: 295 SAERLALRLNEL--ATPEGEPAVE-----------------------IARAHHGSLAREE 329 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R + E+ LK+GE+ C+VATSSLELGIDMGAVDLV+QV +P SVA+GLQRIGRAGH VG Sbjct: 330 RMVVEERLKAGEIPCIVATSSLELGIDMGAVDLVLQVESPKSVAAGLQRIGRAGHNVGDT 389 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEW 482 SKG FP+ R DL++ AV+ + M G +E P NPLDVL+QQ VA AAA + L VDE Sbjct: 390 SKGRIFPKFRADLLECAVVAQRMREGAIEPTVVPRNPLDVLSQQIVAMAAAEEELNVDEL 449 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + RV R + +L R+ + LDML GRYPS +F+ RP++VW+R G++ R GA+ LA Sbjct: 450 FVRVTRTHSYAELSRQQLENVLDMLDGRYPSSEFAELRPRIVWDRIAGVIRPRRGARQLA 509 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 VT+ GTIPDRG++ V LP+G RRVGELDEEMVYE+R LGA+SWRI++I R Sbjct: 510 VTNAGTIPDRGLFMVTLPDG------RRVGELDEEMVYEARPGQTFLLGASSWRIEEIGR 563 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD----GAFFSGTIPPWLAE 658 D+VIVTPAPG +PFW+G+ GRP ELGE IG F D S + P A Sbjct: 564 DRVIVTPAPGAPGAIPFWKGDSVGRPKELGEAIGAFARWAVDQPAEALVASHDLDPRAAR 623 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 N+ + EQ+ AT ++P R +V+ER RDEIGDWR+ + SPYG R+H W +A++ Sbjct: 624 -----NLLDFLREQQAATRVIPSDRTIVVERFRDEIGDWRLCVLSPYGGRIHAAWGLALS 678 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 +I G +A + SDDGI+ +PD D + P A L EP++L V + SSALF A Sbjct: 679 AKIRDQLGLEADAIWSDDGIIVHLPDAD-EPPGAEFALIEPDELEDAVVAELASSALFGA 737 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RFRE A RALL+P PG RTPLWQQRL++ LLE+A+ Y +FP+ILET RECL+DV DL Sbjct: 738 RFRENAGRALLIPRAYPGKRTPLWQQRLKSQTLLEVAKRYGEFPIILETYRECLRDVLDL 797 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 P L L+ +L E+ I +V T T SPFA+SLLF YVA +MY+ D P AERRA+ LSLD Sbjct: 798 PGLHELLTQLQRRELSIVEVETATASPFASSLLFDYVATYMYEGDTPNAERRAAALSLDR 857 Query: 899 ELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQ 958 +LLR LLGQ + +L+D + QVE++LQ + RA + L D+LR +G +T + AQ Sbjct: 858 DLLRELLGQEELRDLIDADALDQVEDDLQHRSERTRASTRDELHDVLRRVGDLTAAEAAQ 917 Query: 959 RHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLH 1018 R + A+ L+ L + +R I G++R DA RDALGV P LPE +L Sbjct: 918 RVV-PGVDAAAALDALASERRAVLLRIGGEQRWVDAADAGMYRDALGVVPPGGLPEAFLA 976 Query: 1019 RVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQ--------QLREQGLVMNL 1070 V L L RY + H T E+ F + L+ +LR G+ Sbjct: 977 DVPDALVRLLRRYAQTHGPFTTEEPRLRFGVDPTPALRALERDGELVQGELRPGGVSGTR 1036 Query: 1071 QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSP 1130 + W V RRLR SL R P A L QGV D P P Sbjct: 1037 E---WCETNVLRRLRRASLAVLRREIEPADQRALASFLPSWQGV----DKHP-------P 1082 Query: 1131 GVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL 1190 G G+D + + L G+ L S WE+++LP RV YS+ +D+L A+G ++W G L Sbjct: 1083 G-GAGIDRLREQLVPLQGLALTPSTWETEVLPRRVGAYSATWMDQLCASGELVWVGAGAL 1141 Query: 1191 GEDDGLVALHLQEYAAESFTPAEADQ--ANRSALQQAIVAVLADGGAWFAQQISQRIRDK 1248 G DG VAL+ ++ A P A + A+ + +A+ A LA G +F+ + Sbjct: 1142 GRRDGRVALYFRDDAPLIGPPPGAGRAPAHDTPDHEAVRARLAQGSCFFSDLL------- 1194 Query: 1249 IGESVDLS----ALQEALWALVWQGVITSDIWAPLRALTRSSSNA-RTSTRRSHRARRGR 1303 VDLS A+Q+ALW L W G +T+D +APLRA + + A R + +RS R+ GR Sbjct: 1195 ----VDLSLAPEAMQDALWDLAWAGEVTNDAFAPLRAPRLTLARAQRRAMQRSGRS-TGR 1249 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWS----LLQVEPLNDTERMLALAENMLDRYGIISRQAVI 1359 S R + GRWS L P + + R ALAE +L+RYG+++R+ V+ Sbjct: 1250 ------FSSRRGAGRAEVQGRWSLTAPLFDAAPADPSARRRALAELLLERYGLLTRELVL 1303 Query: 1360 AENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHY 1419 AE IPGGF + + +E G RG FVEGLGGAQFA ++RLR A +A + Sbjct: 1304 AEGIPGGFSGIYSELSQLETLGIARRGYFVEGLGGAQFALPGAVERLR--AQRAPE--EA 1359 Query: 1420 TPVALSANDPANVWGNLLPWPAHPA-TLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 P+ L+A DPA +G LPWP T P R GA VV++G + +LYL +GGK + V Sbjct: 1360 PPLVLAATDPAQPFGAALPWPKREGETRRPARTPGANVVIAGSEPVLYLERGGKALQVLV 1419 Query: 1479 EKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 + E+ F AL R R L +VN PV T LL + GFS P+ L Sbjct: 1420 DPEDPRVRPAFDALADHTRAGRIRRIALEKVNGEPVMGTRWEELLADVGFSVGPRRL 1476 >UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococcales RepID=A7HB32_ANADF Length = 1553 Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 666/1609 (41%), Positives = 905/1609 (56%), Gaps = 169/1609 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++F PA R+WF R+F+ PT Q W R E L++APTGSGKTLAAFL +DRL Sbjct: 11 ELFQPAVREWFSRSFEAPTPAQALAWPAIHRGESTLLLAPTGSGKTLAAFLSCIDRLM-- 68 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E +++ R++Y+SP+KAL DV+RNL+ PL GIA RG+ V +R+ Sbjct: 69 ---FAPEPARKERLRVVYVSPLKALAVDVERNLRAPLAGIAQVASGRGDVHRIPAVSVRS 125 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTPA ER++ R+P D+LITTPESLYL+LTS ARE LR VETVI+DE+HA+ +KRGAH Sbjct: 126 GDTPAPERARFARDPADVLITTPESLYLVLTSNAREVLRSVETVIVDEIHALVPTKRGAH 185 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG----------------------- 229 LALSLERL+AL QRIGLSAT R +VA FLGG Sbjct: 186 LALSLERLEALAGRRLQRIGLSATQRPLEEVARFLGGAEPGLPGGAPPARGRGRRRAQGG 245 Query: 230 --------------------------DRPVTVVNPPAMRHPQIRIVVPVANMDDVS-SVA 262 RPVT+V+ A + ++R+ VPV +M + ++ Sbjct: 246 AALDAGPGASPGASAIAEFRTGADLRHRPVTIVDAGARKALELRVEVPVEDMSRIGEALE 305 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 +G+ S A SIW I +L+ V HR+T+VF NSR +AE+L A LNEL Sbjct: 306 LASGDASQAPVRASIWTAIHPRLLELVRAHRTTLVFVNSRRIAERLAAALNEL------- 358 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 + + ++HHGS+++ QR E ALK G LR +VAT Sbjct: 359 ------------------------AGELLVQAHHGSIARPQRVAIEDALKGGRLRGLVAT 394 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SSLELGIDMGAVDLV+Q+ P SVASG+QRIGRAGH++G S+G+ FP+ R DL+ A + Sbjct: 395 SSLELGIDMGAVDLVVQIEAPPSVASGMQRIGRAGHRIGEASRGVVFPKYRADLLACAGL 454 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA 502 E M AG +E P NPLDVLAQQ VA ++D V+ Y VR AAP+ +L R V+D Sbjct: 455 TEAMHAGEVEATRYPRNPLDVLAQQIVAMVSLDDWDVEALYEAVRGAAPFAELSRSVYDG 514 Query: 503 TLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEG 562 LDMLSGRYPS +F+ RP++ W+R G L AR GA+ +AV +GGTIPDRG+Y V L G Sbjct: 515 VLDMLSGRYPSDEFAELRPRVTWDRVRGKLRAREGARRVAVVNGGTIPDRGLYGVYLAGG 574 Query: 563 EEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRG 622 K G RVGELDEEMV+ESRV + LGA++WRI++IT D+V+V+PAPG ++PFW G Sbjct: 575 --KQGHTRVGELDEEMVFESRVGETFLLGASTWRIEEITHDRVLVSPAPGEPGKMPFWHG 632 Query: 623 EGNGRPAELGEMIGDFLHLLADG---AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIV 679 + GRP ELG IG + L + A + + N+ +E+Q ATG V Sbjct: 633 DAAGRPLELGRRIGRLVRALREAPREAARERLVRAHDLDARAAENLLRFLEDQAQATGAV 692 Query: 680 PGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 P R +++ERCRDE+GDWR+ L +P G V PWA+A R GAD + ++DG Sbjct: 693 PDDRTILVERCRDELGDWRVCLLAPLGTPVLVPWAMAATVRARERLGADVETLWTNDGFA 752 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 R+P ++ PD + L +PE++ ++V +G++ALFAA+FRE A RALL+P R PG RT Sbjct: 753 MRLPGSEAP-PDVSFLLPDPEEVEELVIGQLGATALFAAKFREAAGRALLLPRRRPGQRT 811 Query: 800 PLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVT 859 PLWQQR R++ LL +A + FP++LE RECL+DV+DLPALE +++ L +++ Sbjct: 812 PLWQQRKRSADLLAVASRFGSFPILLEAYRECLRDVFDLPALEEVLQDLRARRVRLVTAD 871 Query: 860 TTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVI 919 T PSPFA SLLFG+VA F+Y DAPLAERRA LS+D LR LLG+ + ELLD + Sbjct: 872 TRVPSPFAASLLFGFVASFIYDGDAPLAERRAQALSIDQAQLRELLGEAELRELLDADAL 931 Query: 920 RQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKR 979 +E +LQ LAP R + +G+ DLL LG ++ E+LA+R ++ E+A+ E L+A +R Sbjct: 932 VALEAQLQHLAPATRVRSVDGIADLLLRLGDLSREELARRT--ATPELAAGAERLVAERR 989 Query: 980 IFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVT 1039 I G+ERL ++DAAR RD LGV LP LPE L V L L RY R HA T Sbjct: 990 AVALRIGGEERLVAVEDAARYRDGLGVPLPPGLPEALLGPVPDALEGLAARYARRHAPFT 1049 Query: 1040 AEQLAHEFSLGIAIVEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAR 1093 +LA + E L+ L E+G ++ + + W EV R LR RSL R Sbjct: 1050 TGELAARLGISRGAAERALRALLERGRLLEGAFRPHGAEREWCDPEVLRGLRRRSLARLR 1109 Query: 1094 EATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPA 1153 E PV +AR+LL G+ P G+D V+ +E+L G LPA Sbjct: 1110 EEIEPVEPRAFARMLLGWHGI---------------PRRGRGLDAVLDAVEKLQGAPLPA 1154 Query: 1154 SLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAE 1213 SL E+++LPARV Y +D L A G V+W G + LGE DG +AL+L + + P Sbjct: 1155 SLLETELLPARVDGYLRGDIDALAAAGEVLWIGLEPLGERDGRIALYLADALPKLLPPVR 1214 Query: 1214 A-------DQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALV 1266 A ++A R ++ LA GA F ++ Q G + + +ALW LV Sbjct: 1215 AAPEQPFGERAGR------VLDHLARRGASFFAELHQ----AAGGGFEQQTV-DALWDLV 1263 Query: 1267 WQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLA-GRW 1325 W+G++T+D + LRA ++ R RGR + P + R P A GRW Sbjct: 1264 WRGLVTNDTFQALRAYAEPATARRE---------RGRALARAPSAFRSRRAAPPAAGGRW 1314 Query: 1326 SLLQVE-------PLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSME 1378 +L+ P TE A A+ +L RYG+++R A AE IPGGF ++ + R +E Sbjct: 1315 TLVAARRELAGAVP-TATEWSAATAQQLLVRYGLVTRGAAAAEAIPGGFSAVYDVLRHLE 1373 Query: 1379 DSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLP 1438 +SGRI RG FV G+G QFA+ +D LR L T L+A DPAN +G LL Sbjct: 1374 ESGRIRRGYFVAGVGAMQFAQPGVLDLLRALREPPEAPEIVT---LAATDPANPYGALLE 1430 Query: 1439 WPA---HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTA 1495 WPA P P R GA VV+ G+L ++++G +++ W + E PE H Sbjct: 1431 WPAVQGGPEGKRPARAVGASVVLVDGELAAHVSRGARQLFAWLPEFE---PERSHVGAAI 1487 Query: 1496 LRREPRLRFTL---------TEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 L L E++ P P+ L+ AGF + GL Sbjct: 1488 AAAVVELVRVLHGRDQAALVVEIDGRPAAAHPLAGYLQAAGFVPTAAGL 1536 >UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKU2_9GAMM Length = 1506 Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/1570 (42%), Positives = 884/1570 (56%), Gaps = 128/1570 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF AF Q T +Q + W H L+IAPTGSGKTLAAFL A+DRL E Sbjct: 6 FRPATDTWFGEAFGQATTIQSRGWPAIRAGRHCLLIAPTGSGKTLAAFLSAIDRLTGEPA 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + R + +LYISP+KAL TD++RNL+ PL GI R GE V IRTGD Sbjct: 66 PEPRTGYS-----VLYISPLKALATDIERNLRAPLTGITHTAARLGEPAREPVVHIRTGD 120 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TP ER R P DIL+TTPESLYL+L S+A E L V TVIIDEVHA+AG+KRGAHLA Sbjct: 121 TPQAERRAQAREPGDILVTTPESLYLLLGSKAAENLESVHTVIIDEVHALAGNKRGAHLA 180 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN----------------P 238 LSLERL QRIGLSATV FLGGDR V V++ P Sbjct: 181 LSLERLAERCDQDPQRIGLSATVHPVEVARGFLGGDREVDVIDAAEPPRLDLEILAPEEP 240 Query: 239 PAMRHPQI----RIVVPVANMDDVSSV-ASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 PA P P+ + + +V GTG+ AG G +E ++ +L HR Sbjct: 241 PAEHAPATTETPEPASPIPSGSILGAVYGQGTGKLPAAG--GDRAARLEPRLMAAILEHR 298 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 STIVF NSRGL E+L R+NE + ++ P DA E A Sbjct: 299 STIVFVNSRGLCERLVQRINEAWR---EQQPE---DAEPVEDLVAA-------------- 338 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 HHGSVS E+RA E LK+G LR +VATSSLELGIDMGAVDLVI V +P +VA GLQR Sbjct: 339 -HHGSVSHERRAEIEGRLKTGRLRGIVATSSLELGIDMGAVDLVIMVESPGAVARGLQRA 397 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GRAGH VG VS+ L PR R DL++ AVI E M AG LE + PHNPLDVLAQQ VA Sbjct: 398 GRAGHGVGQVSRSLLLPRFRGDLLECAVIGERMQAGALEPIHAPHNPLDVLAQQLVAMVC 457 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 VDE ++ +RRAAPW++L R + +ATLDMLSG YPS DF+ RP L W+R LT Sbjct: 458 ERPRTVDELHALIRRAAPWRELSRALLEATLDMLSGHYPSTDFADLRPWLAWDRARDALT 517 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGAT 593 R GA L A + GTIPDRG+Y V + E G R+GELDEEMV+E + + +TLGA+ Sbjct: 518 PRRGAALAARLNAGTIPDRGLYGVHVGE-----GGPRIGELDEEMVFELKTGENVTLGAS 572 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP 653 +W ++ ITRD+V+V+PAPG +LPFW G+G GRP +LG+ IG LA T Sbjct: 573 TWHVEAITRDRVLVSPAPGEVGKLPFWHGDGPGRPIQLGQAIGAATERLAHMDRAERTA- 631 Query: 654 PWLAE-----ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRR 708 WL E E + + I+EQR ATG +P R +V+ER RDE+GDWR+ + +P+G R Sbjct: 632 -WLREHAPLSEAAVETLCDYIDEQREATGQLPSDRRIVVERFRDEVGDWRVCILTPFGAR 690 Query: 709 VHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVRE 768 VH PWA+A+ G + + G + V+ +DDGIV R+ D++ LP+ +PE+L + V Sbjct: 691 VHAPWALALQGALTSTSGFEVQVMYTDDGIVLRLADSE-DLPELDSLFPDPEELEEAVTR 749 Query: 769 AVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETL 828 +G S LFA+ FRE AARALL+ PG RTPLW QRL++ QLL + Y FPV+LET Sbjct: 750 ELGHSTLFASAFRENAARALLLVRNRPGQRTPLWAQRLKSQQLLASVREYASFPVVLETY 809 Query: 829 RECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE 888 R+ L DV+DL AL ++R + I++ +V T SPFA SL+F YVA ++Y+ DAP+AE Sbjct: 810 RQVLADVFDLDALREILRGVQERRIRVHEVETPQASPFARSLVFAYVAAYIYEQDAPMAE 869 Query: 889 RRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLREL 948 R+A L+LD +L LLGQ + EL+DP+ + ++E EL R + L DLLR Sbjct: 870 RKAQALTLDRGMLAELLGQAELRELIDPEALAELEAELAHATEATRVPDADALHDLLRRR 929 Query: 949 GPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRL 1008 G +T +++A +E +LE L R I+G+ R +DAA RDALGV Sbjct: 930 GDLTPDEVA---AACAEAPGPWLEQLARSLRAVEVRIAGEPRWIAAEDAALYRDALGVVP 986 Query: 1009 PESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM 1068 P LP +L +PL L RY R H +E L + L + L+ L G+++ Sbjct: 987 PPGLPAAFLEPPQHPLEQLLRRYARTHGPFRSEDLGARYGLAPGALLPALESLERAGVLL 1046 Query: 1069 NLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSP 1122 + + W ++ RRL+ R+L R+ V A RLL QG+ Sbjct: 1047 RGEIRPQGTGEDWCELDILRRLKRRTLARLRDEAAAVDARALGRLLPAWQGL-------- 1098 Query: 1123 ALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAV 1182 T PG G + + QL G+ LP S W + +LP RVRD+S + LD + A+G Sbjct: 1099 -----TEPG--RGASALRDTLTQLEGIALPWSAWIAHVLPMRVRDFSLDALDRITASGEF 1151 Query: 1183 IWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSA----LQQAIVAVLADGGAWFA 1238 +W G LG+ DG + +E A P EAD A+ A L QAI+ L GA F Sbjct: 1152 VWVGAGALGQRDGRIRFLRREQAMVLLEP-EADAADTPASDDPLAQAILETLDRRGACFY 1210 Query: 1239 QQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR 1298 ++ + R ++ A++ A+W VW G IT+D +APLR+L + ++AR RR + Sbjct: 1211 MELERAARSAQPDARQ-DAIEAAIWDRVWAGQITNDTFAPLRSLGQRKTSAR-GRRRPGQ 1268 Query: 1299 ARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQ--VEP-LNDTERMLALAENMLDRYGIISR 1355 G GRWS + ++P ++ TER AEN+L RYG++SR Sbjct: 1269 GLAG--------------------GRWSRVADLIDPDVSLTERAREQAENLLARYGVVSR 1308 Query: 1356 QAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQ 1415 + AE +PGGF + + R+MED+G++ RG FVEGL GAQFA +DRLR L A Sbjct: 1309 EMARAEGLPGGFGRVYPVYRAMEDAGKLRRGHFVEGLTGAQFARAGAVDRLRALERAADD 1368 Query: 1416 TRHYTPVALSANDPANVWGNLLPWPAHP--ATLVPTRRAGALVVVSGGKLLLYLAQGGKK 1473 T P L++ DPAN WG LLPWP P A R AGALV ++GG+ LLYLA G++ Sbjct: 1369 TPE--PQWLASVDPANPWGQLLPWPQPPEAAEGRLRRVAGALVALAGGQPLLYLAASGRQ 1426 Query: 1474 MLVWQEKEELLAPEVFHALTTALRRE-------PRLR-FTLTEVNDLPVRQTPMFTLLRE 1525 + VW+ + E AL T R+ P+ R T+ VN P RQ+P LR Sbjct: 1427 LFVWEAIPGIDTAEEHAALVTEAIRQLAGSRWLPKRRSITIETVNGEPARQSPFAAALRA 1486 Query: 1526 AGFSSSPQGL 1535 G +GL Sbjct: 1487 GGAMGEVRGL 1496 >UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTJ5_THISH Length = 1476 Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 659/1559 (42%), Positives = 892/1559 (57%), Gaps = 123/1559 (7%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T WF F +PT VQ + W A +HAL++APTGSGKTLAAFL +DRL +E Sbjct: 1 MFSRPTHTWFSDNFTEPTPVQREGWARIAAGDHALLVAPTGSGKTLAAFLAGIDRLMQEA 60 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + + R+LY+SP+KAL DV+RNL+ PL GI R GE +LRV +RTG Sbjct: 61 DD------AKAGVRVLYVSPLKALVYDVERNLRAPLTGILRTAERLGEPARSLRVDMRTG 114 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTP ER ++P IL+TTPESL+L+L S+ARE LR V TVI+DEVHA+A SKRGAHL Sbjct: 115 DTPQAERRAQLKDPAQILVTTPESLFLLLGSKARENLRTVHTVIVDEVHALAPSKRGAHL 174 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERL + QRIGLSATV A FLGGDR V +V+ A + + VPVA Sbjct: 175 ALSLERLAEITDAEPQRIGLSATVNPPELAARFLGGDREVAIVDTSAKPALDLHVEVPVA 234 Query: 254 NMDDVSSVASGTGEDSHAGR----------------EGSIWPYIETGILDEVLRHRSTIV 297 +M+ V S A+ T G E IWP + ++ + HRST++ Sbjct: 235 DMEAVQSPATTTPPGPKRGGSILGELYAREVARPTPERGIWPAMYPALVAAIRSHRSTLI 294 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 F NSRGLAE+LT RLNE+ +D + +HHG Sbjct: 295 FVNSRGLAERLTQRLNEV-------------------------------ADEPLVLAHHG 323 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 SVS E+RA E+ LK+G L+ +VATSSLELG+DMGAVDLVI V +P SVA GLQR+GRAG Sbjct: 324 SVSHERRAEIEEGLKAGRLKGIVATSSLELGVDMGAVDLVILVESPGSVARGLQRVGRAG 383 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 HQVG VS+GL +P+ R DL++ AV+ E M G LE ++ P NPLDVLAQQ VA Sbjct: 384 HQVGAVSRGLIYPKFRGDLLECAVVSEAMLEGLLEPISVPRNPLDVLAQQLVAMVCDTPR 443 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG 537 V E + VRR P+++L R + + LDMLSG YPS +F+ RP L W+R LT R G Sbjct: 444 TVSELEALVRRTHPYRELSRPLLEGVLDMLSGHYPSAEFADLRPWLAWDRAEDRLTPRRG 503 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 A + + GTIPDRG+Y+V L A R+GELDEEMV+E+R + I LGA++WR+ Sbjct: 504 APMAVRLNAGTIPDRGLYAVHL----GGADGPRLGELDEEMVFETRAGENILLGASTWRV 559 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA 657 ++IT D+VIV+PAPG +LPFW G+ GRP ELG IG L GA WL Sbjct: 560 EEITGDRVIVSPAPGEPGKLPFWHGDSLGRPVELGRRIGALTGKL--GALSQAEAARWLE 617 Query: 658 EENTIA-----NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 ++ N+ + EQ+ TG++P + +ER RDE+GDWR + SP+G R+H P Sbjct: 618 AHTPLSAFAAGNLAAYVHEQKQHTGVLPTDTAITVERFRDELGDWRACILSPFGARIHAP 677 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 W +A+ + A G + V+ +DDGIV R DTD LPDA + +PE++ +++ E + + Sbjct: 678 WGMALQNLLSARSGFEVQVMYTDDGIVLRFADTDA-LPDADELIPDPEEIEELITEQLAT 736 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 +ALFA FRE AARAL++ P RTPLW QR++++QLL YP FP++LET R+ L Sbjct: 737 TALFAGLFRENAARALMLTRNRPEGRTPLWAQRMKSAQLLATVSRYPAFPIVLETYRQAL 796 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 DV+DL L+ L+ + +++ +V T + SPFA SL+F YVA ++Y+ DAPLAERRA Sbjct: 797 SDVFDLAGLKALLADIRARRVRVDEVETRSASPFARSLVFAYVAAYIYEQDAPLAERRAQ 856 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 L+LD LL LLGQ + ELLD +V+ ++E EL RA+ + L DLLR LG Sbjct: 857 ALTLDRGLLSELLGQAELRELLDAEVLEELEAELAHETDETRARDADELHDLLRRLGDQH 916 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 +++LA+R T E+ A +LE L R I+G+ R +DA RDALGV P L Sbjct: 917 LDELARRCT---EDPAPWLETLKHSGRAAAVRIAGEPRFIAAEDAGLYRDALGVAPPPGL 973 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ- 1071 P+ +L V L L R+ R +Q A F L A V L+ L +G ++ + Sbjct: 974 PDAFLVPVPDALEQLLRRFARTRGPFVTKQAAARFGLTEAQVIPVLRALLTEGRLVQGEL 1033 Query: 1072 -----QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFA 1126 + W ++ RRL+ R+L + R PV A AR L E G+ T Sbjct: 1034 RPGGREPEWCDVDILRRLKRRTLASLRHQAAPVEARALARFLPEWHGITRETGQR----- 1088 Query: 1127 STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSG 1186 + G +M V+ QL G+ LP SL ILPARV ++ EMLD ATG V+W G Sbjct: 1089 ------HGGAARLMDVVAQLEGLPLPWSLLAEVILPARVSGFTLEMLDMAAATGQVVWVG 1142 Query: 1187 QKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIR 1246 G DG VAL+ +E A PA D + L + ++ L GA F ++ ++ Sbjct: 1143 TGAQGPRDGRVALYRRERAPLLLPPA-GDLPD-GPLHRTLLEHLDRRGASFYLELETAVQ 1200 Query: 1247 DKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNART-STRRSHRARRGRPV 1305 E+ + + + ALW LVW G IT+D +APLRAL R S + STRR +A G Sbjct: 1201 RAHPEA-NAADFRAALWDLVWAGAITNDTFAPLRALARGPSKSTGRSTRRGGQALAG--- 1256 Query: 1306 YAQPVSPRVSYNTPNLAGRWSL---LQVEPLNDTERMLALAENMLDRYGIISRQAVIAEN 1362 GRWS L+ ++DTE+ +A AE +L+RYGI+SR+A +AEN Sbjct: 1257 -----------------GRWSRVSELRDPTVSDTEQAVARAEMLLERYGIVSREAALAEN 1299 Query: 1363 IPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPV 1422 +PGGF ++ + R+ME+SGRI RG FVEGL GAQFA ++DR+R + + PV Sbjct: 1300 LPGGFGAVYGVLRAMEESGRIRRGYFVEGLSGAQFAWAGSVDRIRGIRLEDDPQAGGEPV 1359 Query: 1423 A--LSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 A L+A DPAN +G LLPWP P R GA V++ G +LYL GGK ++ ++ Sbjct: 1360 AQCLAAMDPANPFGTLLPWPEPAGDTRPRRVPGAWVILVDGLPVLYLGPGGKHLVTLDQE 1419 Query: 1481 EELLAPEVFHALTTALRREPRL---RFTLTE-VNDLPVRQTPMFTLLREAGFSSSPQGL 1535 P A AL + PR R + E V+ +PV ++P +L EAGF +G Sbjct: 1420 -----PHRLRAACRALHQIPRTGRRRLMIIEQVDGVPVNESPHAGMLLEAGFVRDYRGF 1473 >UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023K9_SOLUE Length = 1521 Score = 1040 bits (2690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 651/1572 (41%), Positives = 899/1572 (57%), Gaps = 124/1572 (7%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+F TR WF F PT Q W AR + L++APTG+GKTLAAF + +DRL Sbjct: 17 DLFHAPTRAWFEAVFTAPTRPQALGWPAIARGDSTLILAPTGTGKTLAAFQWCIDRLMF- 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 K + R++YISPIKAL DV+RNL+ PL GIA R G + IRT Sbjct: 76 ----APVPAKNQRCRVVYISPIKALAVDVERNLRAPLAGIAMAARAAGIAFHEPTIAIRT 131 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTPA ER++ R P DILITTPES+YL+LTS ARE LR VETV++DE+HA+ +KRG+H Sbjct: 132 GDTPAAERARFARRPADILITTPESIYLLLTSNAREMLRSVETVVLDEIHALVPTKRGSH 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---------------------- 230 LALSLERL+AL QRIGLSAT R +VA FLGG Sbjct: 192 LALSLERLEALCGRKLQRIGLSATQRPLDEVARFLGGAVTASAGKKERAGDATQEILAEF 251 Query: 231 ---------RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYI 281 R VT+V+ A + +R+ VP+ +M + + +G S SIW I Sbjct: 252 ESASATPKYREVTIVDASAPKRIDLRVEVPIDDMTRLDELVVPSGPASAPPVRPSIWSAI 311 Query: 282 ETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS 341 +L+ V H ST++FTNSR LAE+++ +NEL +G T Sbjct: 312 HPKLLELVRAHTSTLIFTNSRRLAERISGAVNEL---------------------AGET- 349 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 + R+HHGSV+ +QR E LK G LR +VATSSLELGIDMGA+DLV+Q+ Sbjct: 350 ---------LVRAHHGSVAADQRKEIEDRLKMGTLRGLVATSSLELGIDMGAIDLVVQIE 400 Query: 402 TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 P SVASG+QR+GRA H+VGGVS + FP+ R DL+ A I M+ G++E++ P NPL Sbjct: 401 APPSVASGMQRVGRASHRVGGVSAAVMFPKYRGDLLGCAAITRAMYQGKVESVHYPRNPL 460 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 DVLAQQ VA AMDA E Y+ VRRAAP+ L R VFD+ LDMLSGRYPS +F+ RP Sbjct: 461 DVLAQQIVAMVAMDAWDAGELYALVRRAAPYAALTRPVFDSVLDMLSGRYPSDEFAELRP 520 Query: 522 KLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE 581 +L W+R +G LT+R GAQ +AV +GGTIPDRG++ V L + A RVGELDEEMV+E Sbjct: 521 RLTWDRVSGQLTSRQGAQKVAVVNGGTIPDRGLFGVFLMGATKGA---RVGELDEEMVFE 577 Query: 582 SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL 641 SR D I LGAT+WRI++IT D+V V+PAPG ++PFW G+ GRPAE G IG+ Sbjct: 578 SRTGDTIILGATTWRIEEITHDRVTVSPAPGEPGKMPFWHGDAAGRPAEFGREIGEMTRE 637 Query: 642 LAD---GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 L D A F+ I + + N+ +EEQ+ ATG VP R +V+ERCRDE+GDWR Sbjct: 638 LLDMPRAAAFARLIDEHSLDASAAENLMRYLEEQKIATGRVPSDRDIVIERCRDELGDWR 697 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE 758 + + +P+G RVH PW +A ++ + G +A + +DDG V R+P+++ L + L Sbjct: 698 VCVLTPFGTRVHAPWCMAATAKLRSERGIEAESMWTDDGFVLRMPESEEPL-ETEWLLPS 756 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 P +L +V +GS++LFAA+FRE AARALL+P R G R PLWQQR RA+ LL +A Y Sbjct: 757 PGELKDLVLRQLGSTSLFAAKFREAAARALLLPRRRAGIRAPLWQQRKRAADLLAVATRY 816 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 FP++LET REC+++V+DL A +++ + G I+++ V +T PSPFA +LLF Y+A + Sbjct: 817 SSFPMLLETYRECVREVFDLEAATAILKEVQRGTIRVTAVESTKPSPFAGTLLFSYIANY 876 Query: 879 MYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE 938 +Y DAPLAERRA LS+D L +LG D ELLD + +VE++LQ L P +A+ Sbjct: 877 IYDGDAPLAERRAQALSIDQSQLEEILGSTDFRELLDRAAMEEVEQQLQALDPDYQARHT 936 Query: 939 EGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAA 998 + L DLL +LG ++ E++A R TG S LE+L+A +R I+G+ R ++ AA Sbjct: 937 DALHDLLLKLGDLSKEEIAARSTGGS------LEDLVAARRAVRVRIAGETRYIPVEYAA 990 Query: 999 RLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL 1058 R RDA+G LP L +++L +PL +L RY R H T ++A + L A V+ L Sbjct: 991 RYRDAVGTPLPPGLADVFLESSEHPLLELLRRYARTHGPFTTAEVAARYGLVAAQVDASL 1050 Query: 1059 QQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQ 1112 ++ G ++ + W +V +++R ++L R P T+AR+L Q Sbjct: 1051 RRQHLDGKLLEGEFRPEGVHREWCDPDVLQQIRRKTLARLRREVVPAEQHTFARMLTRWQ 1110 Query: 1113 GVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEM 1172 G + P G D ++ IE L G LP S E +ILPARV DY Sbjct: 1111 G-------------AAVP--RRGQDALLDTIEILQGAALPVSELEREILPARVSDYRPAD 1155 Query: 1173 LDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLAD 1232 LD L+A+G V+W G++ +G+ DG VAL+L E + P+ + + AL IV +L Sbjct: 1156 LDALMASGDVVWVGREPVGDRDGRVALYLAEALHKLLLPSPPPELSGRAL--VIVELLRQ 1213 Query: 1233 GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS 1292 GA F + Q QEALW LVW G+IT+D + PLR L + + R Sbjct: 1214 MGANFFAALHQAAGGGFPNDT-----QEALWELVWAGIITNDTFHPLRNLLHAKDDER-G 1267 Query: 1293 TRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE---PLNDTERMLALAENMLDR 1349 R G P + + R GRWSL+ + TE A+ +L R Sbjct: 1268 RREVREGPPGSPEFLRRFRARTG-GAQGGEGRWSLVAQRLGAGVTQTEWSANQAQQLLVR 1326 Query: 1350 YGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL 1409 +GI+ R+ ENI GG+P++ ++ME++G + RG FV GLG AQFA +D LR L Sbjct: 1327 HGIVMRETASVENIVGGYPAIYPALKTMEENGWVRRGMFVAGLGAAQFAMTAAVDMLRSL 1386 Query: 1410 ATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQ 1469 + + + L+A+DPAN +GNLL WP ++ R +GA VV+ G+L +L + Sbjct: 1387 RAEPEKPE---ALHLAASDPANPYGNLLAWPGANHSM--ARASGASVVLVNGQLAAFLRR 1441 Query: 1470 GGKKMLVWQEKEE----LLAPEVFHALT-TALRREPRLR-FTLTEVNDLPVRQTPMFTLL 1523 + V +EE +A E+ L A+RR+ R + E+ND P ++ + L Sbjct: 1442 RNPSIRVMLPEEEPERSRVARELAKKLAEVAIRRQGRRSGLLIGEINDAPAQEHFLARFL 1501 Query: 1524 REAGFSSSPQGL 1535 AGF SS G Sbjct: 1502 EGAGFVSSAPGF 1513 >UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Micrococcineae RepID=C5BWN7_BEUC1 Length = 1668 Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 705/1655 (42%), Positives = 921/1655 (55%), Gaps = 176/1655 (10%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR WF +F PT Q W A +HALV+APTGSGKTLAAFL+ALD L G Sbjct: 42 FSEPTRTWFAESFPAPTEAQAGAWEAIAGGDHALVVAPTGSGKTLAAFLWALDALL--GA 99 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 E +A + R+LYISP+KAL DV+RNL+ PL GI+ R+G ++RVG+RTGD Sbjct: 100 EAPDDAER---CRVLYISPLKALAADVERNLRSPLVGISRIAARQGHPVRDVRVGMRTGD 156 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER + P DILITTPESL+L+LTS AR L GV TVI+DEVHA+AGSKRGAHLA Sbjct: 157 TPAGERRRFATKPTDILITTPESLFLVLTSAARAGLAGVTTVILDEVHALAGSKRGAHLA 216 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-------DRPVTVVNPPAMRHPQIR 247 LSLERLDA+L AQRIGLSATVR +V FL G R V V PP+ + +I Sbjct: 217 LSLERLDAMLPRPAQRIGLSATVRPVEEVGRFLAGARTIGDGGRSVRTVQPPSHKEIRID 276 Query: 248 IVVPVANMDDV---------SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + VPV +++D+ S A+G D+ R S+WP++ ++D + HR+T+VF Sbjct: 277 VEVPVPDLEDLGDAERELDLSGDAAGLLPDARP-RTASVWPHVTERVVDIISAHRTTLVF 335 Query: 299 TNSRGLAEKLTARLNELYAAR---------------------LQRSPSIAVDAAHFESTS 337 TNSR AE+LTAR+NE +A R PS V+ A + Sbjct: 336 TNSRRGAERLTARINEAWAERRLAVEGAIADDGDGDGDGDPGYDVDPSDDVEGAAPPADP 395 Query: 338 GAT----------SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 G+ + + D +AR+HHGS+S+E+R E LK+G L VVATSSLEL Sbjct: 396 GSAWGAQTPGQSGTALAVAGDAVVARAHHGSMSREERTRIEDDLKAGRLPAVVATSSLEL 455 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GIDMG++D+V+QV P SVAS LQRIGRAGHQVG VS G+ P R DL+ +AV Sbjct: 456 GIDMGSIDVVVQVGAPPSVASELQRIGRAGHQVGAVSHGVVLPTHRGDLLAAAVAAVRGR 515 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 G +E+L P NPLDVLAQQ VA AMD +V E + VRRAAP+ L A LDML Sbjct: 516 EGAIEHLHIPANPLDVLAQQVVAMLAMDDWKVAELTALVRRAAPYAGLGDASLAAVLDML 575 Query: 508 SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA- 566 +GRYPS DF+ RP++VW+R +L+ARPGA LA TSGGTIPDRG+Y V L G E Sbjct: 576 AGRYPSEDFAELRPRIVWDRVDDVLSARPGALRLAATSGGTIPDRGLYGVYLAAGAEDVA 635 Query: 567 --GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 G RRVGELDEEMVYESRV D TLG ++WRI+ IT D+V+V+PA G RLPFWRG+ Sbjct: 636 TRGGRRVGELDEEMVYESRVGDTFTLGTSTWRIEDITPDRVLVSPAAGLPGRLPFWRGDA 695 Query: 625 NGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRH 684 GRP ELG +G + + + + W +E N+ + QR ATG + Sbjct: 696 PGRPFELGAALGAMVRDVERAREPAELLTGWGLDEWARDNLLAYLTAQREATGHLSTDHT 755 Query: 685 LVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD 744 +V+ER RDE+GDWR+++H+P+G RVH PWA+A+A R+ +G D + +DDGIV R+PD Sbjct: 756 IVVERFRDELGDWRLVIHTPFGARVHAPWALALASRLQDRFGMDVQAMHADDGIVLRLPD 815 Query: 745 TD------------GKLPDAA--------------IFLFEPEKLLQIVREAVGSSALFAA 778 G PDAA L +P+++ V A+ SA FAA Sbjct: 816 AGGGDDDLGAVPLPGGWPDAAAADSAGPGTQVDLADLLLDPDEVSGAVTAALAGSAHFAA 875 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RFRE AARALL+P R P R PLWQQR RA+QLL +A YPDFP++LE +RECLQD +D+ Sbjct: 876 RFREAAARALLLPRRRPDRRQPLWQQRHRAAQLLGVAARYPDFPIVLEAVRECLQDDFDV 935 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD- 897 PAL LMR++ EI++ +VTTT PSPFA SLLFGYV +F+Y DAPLAERRA+ L+LD Sbjct: 936 PALADLMRQVAAREIRVLEVTTTAPSPFARSLLFGYVGQFLYDGDAPLAERRAAALTLDP 995 Query: 898 -SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDL 956 G D +LLD + VE ++ L R + EG FDL+R LGP+ E++ Sbjct: 996 ALLGELLGEGLTDLADLLDAGAVADVEAQVGLLTEASRVRDAEGAFDLVRRLGPVPAEEV 1055 Query: 957 AQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIY 1016 A+R E V +L +L +RI ++G+E+ + +DA RLRDALG LP LP Sbjct: 1056 ARRAL-DPEAVPGWLADLERQRRIIAVRVAGREQWSAAEDAGRLRDALGTALPLGLPAAV 1114 Query: 1017 LHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ----- 1071 L V P DL R+ R H TA ++AH F L V L+ G + + Sbjct: 1115 LESVPDPFGDLVRRHARTHGPFTAAEVAHRFGLAPGAVLPVLRTFERDGTLTAGRLRPAA 1174 Query: 1072 ---------------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLP 1116 ++ + EV RR+R RSL A R V T L Q + Sbjct: 1175 SGASAGSDGVPEPGAREEFCDSEVLRRIRRRSLAALRADVEAVPPATLGVFLPRWQQL-- 1232 Query: 1117 ATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDEL 1176 G G DGV+ ++QLAG LP+S E+ +LPARVRDY+ MLDEL Sbjct: 1233 --------------GTLRGTDGVLAAVDQLAGARLPSSALETTVLPARVRDYAPAMLDEL 1278 Query: 1177 LATGAVIW----SGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLAD 1232 + G V+W D +V + A + P E + L + +V VLAD Sbjct: 1279 TSAGEVVWVGTGGSPGGGPSDGTIVLVPTDAAAVLAPLPGELP----TELARRVVEVLAD 1334 Query: 1233 GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS 1292 GG +F + GE ++ + +ALW VW G +T+D APLRA R S Sbjct: 1335 GGRFFRDLYAAIASAADGEPPAVAEVHDALWDAVWAGHVTNDTLAPLRARLEQ----RPS 1390 Query: 1293 TRRSHRARRGRPVYAQPVSPRVSYNTP-------------------NLAGRWSLLQVEPL 1333 T A P +S R + TP + AGRWS++ Sbjct: 1391 TSSRRAAAARSPRSRSALS-RRALMTPALAAAGSTAAQAARIPTPASAAGRWSVVGAVET 1449 Query: 1334 NDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLG 1393 + T R+ A A +LDR+G++ R AV AE +PGGF ++ + +E+SG++ RG VEGLG Sbjct: 1450 DPTIRLAATAAALLDRHGVLVRGAVAAEEVPGGFGALYRVLVRLEESGQVRRGYVVEGLG 1509 Query: 1394 GAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLV------ 1447 +QFA IDRLR A + PV L+A DPAN +G LPWPA P + Sbjct: 1510 ASQFALPECIDRLR-----ADAAANPGPVLLAAVDPANPYGAALPWPAAPTSAEGVTTGA 1564 Query: 1448 -PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ----EKEELLAPEVFHALTTALRR--EP 1500 P R GA VV+ G L+LYL +G + +L + A A + AL R Sbjct: 1565 RPRRVPGAHVVLVDGALVLYLERGARTLLSFTADDARLRAAAAALANAAASGALGRVVVQ 1624 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 R T V D P+RQ L +AGF ++P+GL Sbjct: 1625 RSDGAATLVADTPLRQA-----LLDAGFVATPRGL 1654 >UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria RepID=Q2IJM9_ANADE Length = 1536 Score = 1013 bits (2619), Expect = 0.0, Method: Compositional matrix adjust. Identities = 668/1597 (41%), Positives = 899/1597 (56%), Gaps = 142/1597 (8%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 MA +PD +++ F PA R WF RAF+ PT Q W R E L++APTGSGKTLA Sbjct: 1 MARSPDAAAV---PFHPAVRAWFERAFQAPTRAQALGWPPIHRGESTLLLAPTGSGKTLA 57 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL +DRL + E +R+ R++Y+SP+KAL DV+RNL+ PL GIA RG Sbjct: 58 AFLSCIDRLM-----FSPEPPRRERLRVVYVSPLKALAVDVERNLRAPLAGIAQVAAERG 112 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 + V +RTGDTPA ER++ R+P D+LITTPESLYL+LT ARE LR VETVI+DE Sbjct: 113 DAHRIPSVAVRTGDTPAAERARFARDPADVLITTPESLYLLLTQAAREGLRTVETVIVDE 172 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---------- 230 +HA+ SKRGAHLALSLERL+ L QRIGLSAT R +VA FLGG Sbjct: 173 IHALVPSKRGAHLALSLERLEQLAGRPLQRIGLSATQRPLDEVARFLGGARPAAPAGAGE 232 Query: 231 -----------------RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGED-SHAG 272 RPVTVV+ + + ++ + VPV +M + G D S A Sbjct: 233 AEGALGELRDRAARPAWRPVTVVDAGSRKALELTVEVPVEDMARLGEPLDLPGGDASQAP 292 Query: 273 REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH 332 SIW I +L+ V HR+T++F NSR +AE+L LNEL Sbjct: 293 PRASIWTAIHPRLLELVKAHRTTLLFVNSRRVAERLAGALNEL----------------- 335 Query: 333 FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG 392 +G T + ++HHGS+++ QR E LK+G +R +VATSSLELGIDMG Sbjct: 336 ----AGET----------LVQAHHGSIARPQRIAIEDNLKAGRVRGLVATSSLELGIDMG 381 Query: 393 AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE 452 +VDLV+Q+ P SVASG+QRIGRAGHQVG S G+ FP+ R DLV A + E M G +E Sbjct: 382 SVDLVVQIEAPPSVASGMQRIGRAGHQVGAPSAGVLFPKYRGDLVACAALTEAMQEGDVE 441 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 NPLDVLAQQ VA ++D +VD+ ++ +R AAP+ +LPR + + LD+LSGRYP Sbjct: 442 ATRYLRNPLDVLAQQIVAMVSLDDWRVDDLHAALRGAAPFAELPRGILEGVLDLLSGRYP 501 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVG 572 S + + RP++ W+R G+L AR GA+ +AV SGGTIPDRG+Y V L G + G RVG Sbjct: 502 SEELAELRPRVTWDRVRGVLRAREGARRVAVVSGGTIPDRGLYGVYLLGGAK--GQARVG 559 Query: 573 ELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELG 632 ELDEEMV+E+ V + TLGA++WR+++IT D+V+V+PAPG ++PFW G+ RP ELG Sbjct: 560 ELDEEMVFETAVGETFTLGASTWRVEEITHDRVLVSPAPGEPGKMPFWHGDAAARPVELG 619 Query: 633 EMIGDFLHLLADGAFFSGTIPPWLAEENTIA----NIQGLIEEQRNATGIVPGSRHLVLE 688 IG + L G + + A A N+ +E+Q+ A G VP R +++E Sbjct: 620 RRIGRLVREL-RGVPRAAALERLRARHGLDARAAENLVRYLEDQQQAAGAVPDDRTVLVE 678 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 RCRDE+GDWR+ + +P+G V PW +A A R GAD + ++DG R+P+TD Sbjct: 679 RCRDELGDWRVCVLAPFGSAVLVPWCMAAARRARDRLGADPETLWTNDGFALRLPETDQ- 737 Query: 749 LPDAAIFLF-EPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLR 807 P FLF EPE++ +V E +G++ALFAARFRE +ARALL+P R PG RTPLWQQR R Sbjct: 738 -PPEVDFLFPEPEEVEALVVEQLGATALFAARFREASARALLLPRRRPGQRTPLWQQRKR 796 Query: 808 ASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFA 867 A+ LL +A + FP++LE RECL+DV+DLPAL LMR L G ++ + T PSPFA Sbjct: 797 AADLLAVASRFAQFPLLLEAYRECLRDVFDLPALVELMRDLKAGRVRRAVADTRVPSPFA 856 Query: 868 TSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQ 927 SLLFG+VA F+Y DAPLAERRA L++D LR LLG+ + ELLD + +E LQ Sbjct: 857 GSLLFGFVASFIYDGDAPLAERRAQALAIDQAQLRELLGEAELRELLDADALADLEARLQ 916 Query: 928 RLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISG 987 L P R + +GL D+L LG ++ ++ +R +S EVA+ L+ L+A +R P + G Sbjct: 917 LLRPELRVRSADGLADMLLRLGDLSRAEVERRS--ASPEVAASLDRLVAERRAVPLRVGG 974 Query: 988 QERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEF 1047 +ER ++DAAR RD LGV LP +PE L V L L R+ R HA TA +LA Sbjct: 975 EERFVAVEDAARYRDGLGVPLPPGVPEALLAPVPDALDGLVARHARRHAPFTAGELAARL 1034 Query: 1048 SLGIAIVEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAA 1101 LG A E L++L G ++ + + W +V R LR RSL RE PV Sbjct: 1035 GLGRAAAERVLERLARAGRLLEGAFRPHGAEREWCDPDVLRTLRRRSLAKLREEIEPVEP 1094 Query: 1102 TTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQIL 1161 R LL G+ G+D V+ +E+L G LPASL ES+IL Sbjct: 1095 RVLGRTLLGWHGITRRA---------------AGLDAVLDAVEKLQGAPLPASLLESEIL 1139 Query: 1162 PARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSA 1221 PARV Y LD L A G V W G + LGE DG VA+ L + PA A + Sbjct: 1140 PARVEGYLPGDLDALAAGGEVTWVGLEPLGERDGRVAIFLADALPALLPPAPAAEPPEDP 1199 Query: 1222 LQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRA 1281 ++ I+ LA GA F ++ + + +A+WALVW+G++T+D + LRA Sbjct: 1200 RERRILDHLAHRGACFFPELHEAAGGGFAQQT-----VDAIWALVWRGLVTNDTFQVLRA 1254 Query: 1282 LTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND------ 1335 ++ R R AR A P GRW+L VE D Sbjct: 1255 RAARAAPRRDRERARRTAR----RAAAAGYRSRLSAPPGAGGRWTL--VEARRDAGGRPR 1308 Query: 1336 ---TERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGL 1392 T+ ALA+ +L RYG+++R AE +PGGF ++ + R +E+SGRI RG FV G+ Sbjct: 1309 PTPTQWSAALAQQLLARYGVVTRGVAAAEALPGGFGAVYDVLRHLEESGRIRRGYFVAGV 1368 Query: 1393 GGAQFAERLTIDRLRDLATQATQTRHYTP--VALSANDPANVWGNLLPWPAHPAT---LV 1447 G QFA+ +D LR A++ P V L+A DPAN WG L+ WP P Sbjct: 1369 GAMQFAQPGALDLLR-----ASREPGEAPEVVTLAAADPANAWGALVEWPPVPGAPEGKR 1423 Query: 1448 PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEE---------LLAPEVFHALTTALRR 1498 P R GA VV+ G + A+G +++L W ++E + A R Sbjct: 1424 PARAVGAEVVLVDGAPGAWAARGLRQVLAWLPEDEPDRSRVGEAVAGALAALARDALARG 1483 Query: 1499 EPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 E L L EVN + P+ L +AGFS + L Sbjct: 1484 EGAL---LEEVNGVAAATHPLAGFLVQAGFSPAGTAL 1517 >UniRef50_D2QB27 ATP-dependent helicase lhr n=3 Tax=Bifidobacterium RepID=D2QB27_9BIFI Length = 1583 Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust. Identities = 535/992 (53%), Positives = 652/992 (65%), Gaps = 79/992 (7%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++FS T+ WF AFK PT Q Q W + LV APTGSGKTL AFL A+D L E Sbjct: 6 NLFSEPTKAWFEHAFKCPTDTQRQAWPAIRSGGNVLVTAPTGSGKTLCAFLSAIDGLMGE 65 Query: 73 G-------GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 G +T KR R+LYISP+KALG DV +NL+ PL GIAD+ + G Sbjct: 66 SAAGTVGDGGNTSGKPKRGV-RVLYISPLKALGVDVAKNLETPLCGIADQCKASGLPAPK 124 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVA 185 +RV IR+GDT +ER + +PPDIL+TTPESL+LMLTS+AR L VETVI+DEVHAVA Sbjct: 125 VRVCIRSGDTAPKERRAIVNHPPDILVTTPESLFLMLTSKARRILSTVETVIVDEVHAVA 184 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP---PAM- 241 GSKRGAHLALSLERLD L+ QRIGLSATV + A FLGG + V ++N PAM Sbjct: 185 GSKRGAHLALSLERLDGLVGHPVQRIGLSATVNPPEEAARFLGGAQAVRIINSGTRPAMD 244 Query: 242 ------------------------------RHPQIRIVVP----VANMDDVSSVASGTGE 267 R P+I V P +A + A+ Sbjct: 245 LKVVEPLEYVHGPKSSEARCRAGGVDSPNPRTPRISGVTPAMESLAERKGIIRKATTGSP 304 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 S GS+WP IE +LDE+L+HR+T+VF NSRGLAEKLTARLN+++A + P Sbjct: 305 ASPGLVGGSVWPAIERSVLDEILKHRTTLVFVNSRGLAEKLTARLNDMHAGMCRSEPHDV 364 Query: 328 VD-------AAHFESTSGATSNRVQS--SDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 A H++S G+T+ V S IA +HHGSVSK++R E+ LK G+LRC Sbjct: 365 GSPEGREGFAGHYDSVIGSTTMLVGSHADGDAIAMAHHGSVSKDRRKQIEERLKRGQLRC 424 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 VVATSSLELGIDMG+VDLVIQ+A PLS++SGLQR+GRA HQVGGVS LF+P TR ++ Sbjct: 425 VVATSSLELGIDMGSVDLVIQIAPPLSISSGLQRVGRADHQVGGVSHALFYPITREQIIG 484 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 +A +E M AG +E LT P NPLDVLAQQTVAAAAMD L DEWY RVR+AA + DL R Sbjct: 485 TAACIESMRAGDIEPLTIPINPLDVLAQQTVAAAAMDDLDPDEWYGRVRKAASFTDLDRS 544 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 +FDA + M++G Y S DFS FRP L N E+G+++ARPGAQ LAVTSGGTIPDRGMY+V+ Sbjct: 545 IFDAVMGMMTGAYDSEDFSVFRPPLQCNEESGLISARPGAQRLAVTSGGTIPDRGMYTVV 604 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 LPE + G RRVGELDEEMVYESR D+ITLG ++W+IQ+ITRD+V+V PAPGR+ARLP Sbjct: 605 LPETDCGPGPRRVGELDEEMVYESREGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLP 664 Query: 619 FWRGEGNGRPAELGEMIGDFL----------------HLLADG----AFFSGTIPPWL-- 656 FW GEG+GR G G FL H DG + F I L Sbjct: 665 FWHGEGDGRDYGFGLAQGRFLREISQGLRARTAENFRHANVDGVDVESRFDARIIARLRR 724 Query: 657 --AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 ++N I N+ L+EEQR TGI+P R LV+ERCRDE GDWRII+HSPYGRRVHEPWA Sbjct: 725 DGLDDNAIGNLADLLEEQRAITGIIPNDRELVIERCRDEEGDWRIIIHSPYGRRVHEPWA 784 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 +AI RI +G D V A+DDGI+ R+PD DG LP + LF+ + L +I+ VG S Sbjct: 785 MAITTRIRQRYGFDGQVYAADDGIIIRLPDVDGALPIRELVLFDLDDLHRIIEAQVGESV 844 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQD 834 L++ARFRECAAR+L +P PG R PLWQQRLRA+QLL A+ +FP++LET RECLQD Sbjct: 845 LYSARFRECAARSLFLPRTDPGRRVPLWQQRLRAAQLLNAARARQNFPLLLETARECLQD 904 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 VYDLPAL R+M LN I +SDVTT TPSPFA S+LFG+V MYQ D P AER +L Sbjct: 905 VYDLPALRRIMTGLNSATIALSDVTTETPSPFAESMLFGFVGAVMYQYDVPQAERSTRLL 964 Query: 895 SLDSELLRNLLGQVDPGELLDPQVIRQVEEEL 926 S+D E+L LLG D +LD VIRQV EL Sbjct: 965 SMDPEVLERLLGGTDMSTVLDADVIRQVAHEL 996 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 174/503 (34%), Positives = 255/503 (50%), Gaps = 69/503 (13%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W+ +VFRR+R RSL AR A +PV+ TY LL+RQGV P YE Sbjct: 1104 WLHRDVFRRIRSRSLAKARNAIKPVSPQTYQAFLLDRQGVGPVGGER-----------YE 1152 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQ---KKLG 1191 G+DG+MRVIEQL GV L A +WES + RVR Y MLDEL+A+G VIW G+ Sbjct: 1153 GIDGLMRVIEQLEGVSLAAQIWESSVFSTRVRGYHPSMLDELIASGDVIWVGEGAGDTAA 1212 Query: 1192 EDDGLVALHLQEYAAESFTPAEADQANRSALQ--QAIVAVLADGGAWFAQQIS------- 1242 ++ G +A + + S T A + AL QAI+ L DGGA+ A Q+S Sbjct: 1213 KEVGNIAFYPADSPLVSETVASDTAEDDEALTVPQAIITALQDGGAFHASQLSATAKSVW 1272 Query: 1243 -----QRIRDKIGESV----DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTST 1293 ++ + GE + S +EALW+LVWQG +T+ +AP+RAL + S AR Sbjct: 1273 ERHAEAQVDETTGEIIVPAWGESQFEEALWSLVWQGRVTNSSFAPVRALMQGSGIARAP- 1331 Query: 1294 RRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWS-LLQVEPLND---------TERMLALA 1343 ++ RR R A P++ L G WS ++ P+ + ER +A Sbjct: 1332 -KATLRRRVRMHTAVPMT---------LGGLWSAVVAPRPIENGTATSNGGMEEREIARI 1381 Query: 1344 ENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTI 1403 E++LDRYG+I+ + + I GGF + + + ME+ G ++RG FV+G G AQFA T+ Sbjct: 1382 ESLLDRYGVIAAPLIDKDRIAGGFSRLYPVLKRMEEHGMLVRGLFVDGFGAAQFAGHDTV 1441 Query: 1404 DRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLV----------PTRRAG 1453 D LR Q + VAL DPA++ G + WP T P RR G Sbjct: 1442 DALR----SENQWHSQSCVALEVTDPASLTGAAIAWPELEPTKTEKADGSRGAKPARRTG 1497 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLP 1513 ++VV G+ +L+ +++ + + E L + L AL+R+ + E+N + Sbjct: 1498 SIVVFKQGEPVLFAVPKSHRIMAFTDAEGTLR-QACSELVYALQRQSGGSISFNEMNGIS 1556 Query: 1514 VRQTPMFT-LLREAGFSSSPQGL 1535 ++Q + LL AGF+ SPQG+ Sbjct: 1557 LKQRNKYMRLLHAAGFTESPQGM 1579 >UniRef50_C0E805 Putative uncharacterized protein n=2 Tax=Corynebacterium matruchotii RepID=C0E805_9CORY Length = 1759 Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/1337 (43%), Positives = 796/1337 (59%), Gaps = 105/1337 (7%) Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES 335 SIWP+IE + ++ H+ST+VF NSR +AEKLTA+LNEL+A R A A + Sbjct: 414 SIWPHIEQHLYATIMAHQSTLVFVNSRRIAEKLTAKLNELHAHACARD--RAAGAHGGDD 471 Query: 336 TSGAT--------------------------SNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 T GA S+ + ++ IAR+HHGSV++E+RA TE Sbjct: 472 TDGADTWLARQAPPIPPAASRGQPPADMMKPSDEIVTAPRDIARAHHGSVAQEERARTET 531 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 LK G ++ VVATSSLELGIDMGA+DLV+Q+ +P SVASGLQR+GRAGH VG S G+F+ Sbjct: 532 LLKEGLIKAVVATSSLELGIDMGAIDLVVQIESPPSVASGLQRVGRAGHIVGAASTGIFY 591 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 P+ R DLV++AV V+ M AG +E + P N LDVL Q T+AA ++ V++W+ V RA Sbjct: 592 PKHRADLVNTAVTVQRMRAGLIEEIRIPTNALDVLLQHTIAAVSVADWDVEQWFETVTRA 651 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 P+ +L R VFDA +++ SG YPS DF+ RP+++++R TG L+ARPGAQ +AVTSGGTI Sbjct: 652 YPYHNLDREVFDAVINLASGSYPSTDFAELRPRIIYDRITGTLSARPGAQRIAVTSGGTI 711 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 DRGM+ V L G E G+RRVGELDEEMVYESRV D+ TLGA+SWRI++ITRDQV+VTP Sbjct: 712 ADRGMFGVFLLGGGE--GARRVGELDEEMVYESRVGDVFTLGASSWRIEEITRDQVLVTP 769 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA-----DGAFFSGTIPPWLAE------ 658 APG S RLPFW G+ GRPAEL +G+F +A + A +G P +E Sbjct: 770 APGSSGRLPFWLGDQVGRPAELSRAVGEFRRAVAQSLAVESAEGAGEKPNAESEHIFDGL 829 Query: 659 -ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 E NI+ I EQR+ TGIVP + L++ER RDE+GDWR++LHSPYGR V+ WA+A+ Sbjct: 830 DEWASDNIRRFISEQRDVTGIVPDEKTLLVERFRDEVGDWRVVLHSPYGRGVNAAWALAV 889 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 +I + G DA V+ DDGIV R+P++D +P A +F +P+ + IV E VG+SALFA Sbjct: 890 GAKISSDMGIDAQPVSGDDGIVLRLPESD-VVPGAGLFQIDPDDIADIVAEQVGNSALFA 948 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD 837 ARFRECAAR LL+P PG R PLWQQR RA+QLL++A+ YP+FP+ILE +RECLQDVYD Sbjct: 949 ARFRECAARGLLLPRHNPGKRAPLWQQRQRAAQLLDVARKYPNFPIILEAVRECLQDVYD 1008 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 LPAL +L + G ++I++V T PSPFA ++LF Y F+Y++D+PLAE+RA+ L+LD Sbjct: 1009 LPALVQLCEDIKGMRVRIAEVETMQPSPFAVAMLFTYTGAFIYETDSPLAEKRAAALALD 1068 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 +LL LLG V+ +LLDP +I V+ L+R+AP RRA+ E L D LR LGP+ + DL Sbjct: 1069 PKLLAKLLGSVELRDLLDPDIIADVDARLRRIAPDRRARTGEELIDALRILGPIPIADLP 1128 Query: 958 QRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYL 1017 V ++ + L +R+ I+G E LA + DA LRD LG+ +P P + Sbjct: 1129 HHML-----VDAFRIDDLDRQRVMRVRIAGVEHLAQVSDAPLLRDGLGIPVP---PGVAA 1180 Query: 1018 HRVSYP--LRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM------N 1069 P L L R+ R + F L ++ L L + GL++ Sbjct: 1181 PTALVPDALEQLASRWCRTRGPFLLADMVAAFGLAPSVAHNLLSGLVDTGLIIVGHYRHG 1240 Query: 1070 LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLP-ATDGSPALFAST 1128 + + +V+ +V + +R RSL AAR T+PV+ + YAR L++ G+ P T G P S Sbjct: 1241 VDEPEYVAADVLKLIRSRSLAAARAQTQPVSHSAYARFLIDWHGISPIKTTGQPR-HDSL 1299 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 G D + V EQLAGV LPAS WE+ ILP+RV DY+ L +L G + G Sbjct: 1300 DVG-----DEIYAVCEQLAGVRLPASAWETLILPSRVHDYNPADLQQLCHDGDIRIVGAG 1354 Query: 1189 KLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLA---DGGAWFAQQISQRI 1245 G +D V L EYAA+ P E + S ++I +++ GG F + Sbjct: 1355 LAGTNDPWVLLLPAEYAAD-LVPVEVEPPTLSPAARSIYDMMSGSPGGGFLFDSLV---- 1409 Query: 1246 RDKIGESVDLSALQEALWALVWQGVITSDIWAPLRA-LTRSSSNARTS-TRRSHRARRGR 1303 D++G D +A + ALW L G+++ D +APL A L + + RTS T R R GR Sbjct: 1410 -DQVG---DPAATRAALWELFDCGLVSPDSFAPLAARLAQGKTAHRTSRTPARSRLRAGR 1465 Query: 1304 PV----------YAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGII 1353 P + + + P++ GRW L + ++ T R +AL E LDRYG++ Sbjct: 1466 PGRPGRQGRMGRIGRGYAGVIHQTPPDMTGRWGLSPIPTVDPTSRSVALGEAWLDRYGVV 1525 Query: 1354 SRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------ 1407 +R A+ AEN+ GGF + S E+SG+ +RG F+ LG AQFA IDRLR Sbjct: 1526 TRGAIQAENVLGGFALAYKVLSSFEESGKALRGHFITDLGAAQFATAAVIDRLRGFADTD 1585 Query: 1408 DLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYL 1467 D+ + T ++A DPAN +G LPWP + P+R AGALVV++ G + +L Sbjct: 1586 DVTGWPSGTSEPNVCVIAACDPANPYGAALPWPGDGKS--PSRAAGALVVLADGLPVAHL 1643 Query: 1468 AQGGKKMLVW------QEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFT 1521 +GGK L W + EE + V AL+ A+ + R T+ ++N PV ++P Sbjct: 1644 TRGGKT-LTWFLPPRAEISEETIIRLVVQALSGAVGKNLTTRITIEKLNGKPVHESPHLE 1702 Query: 1522 LLREAGFSSSPQGLDWG 1538 + R AG +P GL G Sbjct: 1703 VFRTAGARLTPSGLRIG 1719 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 98/179 (54%), Positives = 128/179 (71%) Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 +ILYISP+KALGTDV+ NL+ PL GI R G ++ V +R+GDT A ER+ RN Sbjct: 151 KILYISPLKALGTDVELNLRAPLTGINHTAARLGIHHPDITVAVRSGDTTAAERAAHIRN 210 Query: 147 PPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHT 206 PPDILITTPES YL+LTS+A L V T+I+DE+HA+AG+KRG HLAL+LERL+ L+ Sbjct: 211 PPDILITTPESAYLILTSKAATILSTVTTIIVDEIHAIAGTKRGVHLALTLERLEHLVEK 270 Query: 207 SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT 265 QRIGLSATVR +A FLGG PVT+++PPA + + +VVPV +M D+ + G+ Sbjct: 271 PLQRIGLSATVRPHETIARFLGGRHPVTIIDPPATKTWDLSVVVPVPDMSDLPAPELGS 329 >UniRef50_B3DRA3 Lhr-like helicase n=11 Tax=Bacteria RepID=B3DRA3_BIFLD Length = 1577 Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/1034 (51%), Positives = 660/1034 (63%), Gaps = 131/1034 (12%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T+ WF AF QPT Q Q W + LVIAPTGSGKTLAAFL A+DRL Sbjct: 7 LFSEPTKMWFEHAFGQPTEAQAQAWPAIHSGRNVLVIAPTGSGKTLAAFLSAIDRLM--- 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 T +R R+LYISP+KAL DV +NL+ PL+GIA + +G + V R+G Sbjct: 64 ---TVPRTRRAGVRVLYISPLKALAADVAKNLEQPLEGIAAQCEAQGLPVPKIAVATRSG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT AQER ++ +PPDIL+TTPESLYL+LTS+A L V+TVI+DE+HAVAG+KRGAHL Sbjct: 121 DTTAQERRRIASHPPDILVTTPESLYLLLTSKAGRILGTVDTVIVDEIHAVAGTKRGAHL 180 Query: 194 ALSLERLDALLHTS--------------------------AQRIGLSATVRSASDVAAFL 227 A+SLERL+ L+ S QRIGLSATV A FL Sbjct: 181 AVSLERLENLVTESRKRDAIDADADEGGDAAVDAGRGDRHMQRIGLSATVNPPEKAARFL 240 Query: 228 GGDRPVTVVNP---------------------------------------------PAM- 241 GG +PVT+VNP PAM Sbjct: 241 GGGQPVTIVNPGGRPAMDLRMIEPLENMRDLQSVNAKQRVGGVDAERSAPHISGVTPAMQ 300 Query: 242 RHPQIRIVVPVANMDDVSSVAS---------------GTGEDSHAGREGSIWPYIETGIL 286 R + R +VPV + D VSS + G D +G SIWP +E IL Sbjct: 301 RLAERRGIVPVDDRD-VSSTSGDDSDASDAFDSSALVGAAGDRTSG---SIWPVVERSIL 356 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYA-ARLQRSPSIAVD----------AAHFES 335 DE+L HR+T+VF NSRG+AEKLTARLN+LYA R +P D + H+++ Sbjct: 357 DEILAHRTTLVFVNSRGVAEKLTARLNDLYAQTRHGTNPDTVRDLGSPEGREGFSTHYDA 416 Query: 336 TSGATSNRVQS--SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 G+T+ V S D IA +HHGSVSK++R + E+ LK GELRCVVATSSLELGIDMG+ Sbjct: 417 VVGSTTMLVGSHEGDDVIAMAHHGSVSKDRRKMIEERLKRGELRCVVATSSLELGIDMGS 476 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN 453 VDLVIQV TPLSV+SGLQR+GRA HQVGGVS LF+P TR+ +V A +E M AG +E Sbjct: 477 VDLVIQVDTPLSVSSGLQRVGRADHQVGGVSHALFYPLTRQQIVTGAASLEAMIAGDIEP 536 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 L P NPLD+LAQQTVAAAAM L D+WY+ VRRAAP+ +LPR +FDA + M+SG Y S Sbjct: 537 LAVPRNPLDILAQQTVAAAAMHDLNADDWYATVRRAAPFAELPRDMFDAVIGMMSGEYNS 596 Query: 514 GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGE 573 +FSAFRP+LVWNR+ G+++ARPG+Q +AVTSGGTIPDRG+Y+V+LPE + G RRVGE Sbjct: 597 EEFSAFRPRLVWNRDNGLISARPGSQKVAVTSGGTIPDRGLYTVVLPEADAGKGQRRVGE 656 Query: 574 LDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGE 633 LDEEMVYESRV D+ITLG ++W+IQ+ITRD+V+VTPAPGR+ARLPFW GEG GR Sbjct: 657 LDEEMVYESRVGDVITLGTSTWQIQEITRDRVVVTPAPGRTARLPFWHGEGAGRDYGFSR 716 Query: 634 MIGDFLHLLADGAFFSGT--------------IPPWLA-------EENTIANIQGLIEEQ 672 I F +A G T IP L + N I N+ L+ EQ Sbjct: 717 TIARFTREIAAGLDVKRTEGRSAAEGPAVPTFIPTILTRLHHDGLDANAITNLARLLSEQ 776 Query: 673 RNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVV 732 + ATG VP + L++ER RDE G WRI+L SP+GRRVHEPW++AI+ R+ +G D V Sbjct: 777 QAATGAVPSDQTLIVERTRDEDGGWRIVLLSPFGRRVHEPWSMAISRRLRQRYGFDGQVY 836 Query: 733 ASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPG 792 A+DDGIV ++PD DG +P +FLF+PE L V VG S LFAARFRECAAR+L MP Sbjct: 837 AADDGIVIQLPDGDGHIPAQDLFLFDPEDLKADVERQVGESVLFAARFRECAARSLFMPR 896 Query: 793 RTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGE 852 PG R PLWQQRLRA+QLL+ A+ +FP++LET RECLQDVYD+PAL +M L G Sbjct: 897 SDPGRRVPLWQQRLRAAQLLQSARMAKNFPLLLETARECLQDVYDMPALNEVMTGLQAGT 956 Query: 853 IQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGE 912 I + DV T +PSPFA ++LFG+V MYQ D P AER A +LSLD +L LLG D + Sbjct: 957 ITVKDVETESPSPFAENILFGFVGVVMYQYDQPQAERSAQLLSLDPHVLERLLGATDMAQ 1016 Query: 913 LLDPQVIRQVEEEL 926 +L+P VIR+VE+EL Sbjct: 1017 VLNPDVIREVEQEL 1030 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 198/555 (35%), Positives = 287/555 (51%), Gaps = 79/555 (14%) Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM-------NLQQDIWVSDEVFR 1082 RY + H TA+QL + L L L +G ++ + Q W+ +VFR Sbjct: 1050 RYAKTHGPFTADQLIADLHLDATDAVHTLDVLAAKGELLQGHFVDDDEQGQQWLHKDVFR 1109 Query: 1083 RLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRV 1142 R+R RSL AR+A +PV + + L++RQG+ P YEG DG+MRV Sbjct: 1110 RIRSRSLAKARKAVKPVESEAFQMFLIDRQGIGPVGGER-----------YEGADGLMRV 1158 Query: 1143 IEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGE---DDGLVAL 1199 IEQL G+ LP +LWES + PARVRDY +LDELL +G V+W G K G D G VA Sbjct: 1159 IEQLEGISLPTALWESAVFPARVRDYQPALLDELLTSGDVVWVGSKTGGTSAMDPGEVAF 1218 Query: 1200 HLQEYAAES--FTPAE---ADQANRSALQQAIVAVLADGGAWFAQQI---SQR------- 1244 Y A+S F+ E A+ + + +AI+ L GGA+ A+Q+ ++R Sbjct: 1219 ----YPADSILFSGVEHGTTSNASDATMPEAILTALDSGGAFHARQLMDAAKRAWNETAE 1274 Query: 1245 --IRDKIGESV----DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR 1298 I GE + ++ALW+LVWQG +T+ +AP+RALT +++ R ST Sbjct: 1275 PDINPNTGEIIPQEWSEQQFKDALWSLVWQGKVTNSSFAPVRALTAGAASPRKSTTSR-- 1332 Query: 1299 ARRGRPVYAQPVSP-RVSYNTPNLAGRWSLL----QVEPLNDTERMLALAENMLDRYGII 1353 RRGR V+P R + L G WS + + E + TER LAL E +LDRYG+I Sbjct: 1333 -RRGR------VAPIRRATTDMTLGGLWSAVIGQAEAEDTDQTERALALVETLLDRYGVI 1385 Query: 1354 SRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQA 1413 ++ + ENIPGG+ ++ + ME+ GR++RG FV G G AQFAER T+D LR Sbjct: 1386 AQPVIDKENIPGGYSALYPVLNRMEEHGRLVRGMFVRGFGAAQFAERDTVDALR----HP 1441 Query: 1414 TQTRHYTPVALSANDPANVWGNLLPWPAHPATL-VPTRRAGALVVVSG-----------G 1461 ++ R + VALS DPAN+ G+ + WP PA P RR GA VV++ Sbjct: 1442 SEHRGQSVVALSVLDPANLSGSAIAWPDAPAGAGKPARRIGATVVLNAQGALLYAAAKAK 1501 Query: 1462 KLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR-QTPMF 1520 L + G + V E++ + L AL+R T +++N P+ + P Sbjct: 1502 HLTAFDQSVGHEAAVNDSDEQMR--KAATELAYALKRNGTGSVTFSDINGEPLNARHPFA 1559 Query: 1521 TLLREAGFSSSPQGL 1535 +L ++GF+ PQG+ Sbjct: 1560 RILHQSGFTPVPQGM 1574 >UniRef50_C8RVX4 ATP-dependent DNA helicase (Fragment) n=2 Tax=Corynebacterium jeikeium RepID=C8RVX4_CORJE Length = 1398 Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust. Identities = 602/1411 (42%), Positives = 803/1411 (56%), Gaps = 157/1411 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F WF F +PT VQ Q W + ++ALV+APTGSGKTLAAFL++L RL Sbjct: 7 DSFYAPVAAWFRDVFAEPTIVQTQAWRAISAGQNALVVAPTGSGKTLAAFLWSLSRL--S 64 Query: 73 GG---EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 GG D K +++LYISP+KALG DV RNL PL GIA GET +RVG Sbjct: 65 GGSFFNDAPTPEKSSPTKVLYISPLKALGVDVSRNLAAPLAGIARVADAMGETAAPVRVG 124 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +R+GDTP ERSKL RNPP+IL+TTPESLYLMLTS+A TL V+TVI+DEVHAVAG+KR Sbjct: 125 VRSGDTPQSERSKLLRNPPEILVTTPESLYLMLTSKAAATLANVDTVIVDEVHAVAGTKR 184 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVV------------- 236 G HLALSLERL+ L + QRIGLSATV VA+FLGGDRPVTVV Sbjct: 185 GTHLALSLERLEMLTGRAVQRIGLSATVNPVDKVASFLGGDRPVTVVNPEQPKSWDVQVT 244 Query: 237 -------NPPAMRHPQI-----------------RIVVPVANMDDV-------------- 258 +PPA+ + +V A +D+ Sbjct: 245 SVVEDFQDPPAVEDVALAEYEVAESEAASEKETEEALVDGAPVDEALLGPSLIGEGVGGS 304 Query: 259 ------SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 + VASG ++S ++ S+WP+++ I +V+ +RST+VF NSR AE+LT L Sbjct: 305 TQVGSGARVASGVDKESALPQQKSVWPHVQRAIYRQVMENRSTLVFVNSRRAAERLTGAL 364 Query: 313 NELYAARLQRSPSIAV-----DAAHFESTSGATSNRVQSSD-VFIARSHHGSVSKEQRAI 366 NE +A + P D A + SGA V+ D +AR+HHGSVSK++RA Sbjct: 365 NEEWAK--EHDPDALAAPTRRDPAQMMAQSGA----VRGMDGAGVARAHHGSVSKDERAD 418 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E ALKSGELRCVVATSSLELGIDMG VD V+QV P SVA+ +QR GRAGH VG S Sbjct: 419 IEAALKSGELRCVVATSSLELGIDMGLVDHVVQVGAPPSVAAAVQRCGRAGHNVGATSHA 478 Query: 427 LFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA------------AM 474 +P ++D + V+V+ + G LE L HN LDVLAQQTVAA Sbjct: 479 TIYPLHKQDAEAAVVVVDRLLKGELEPLHVVHNALDVLAQQTVAATVQAGAGGTSGADGT 538 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 AL V+EW+ VRRA P+ LPR FD ++M+SGRYPS DF+ + + +++ G L A Sbjct: 539 GALDVEEWWRVVRRAHPYATLPREAFDGVIEMISGRYPSTDFADLKARAIYDPVAGTLEA 598 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATS 594 RPGAQ LAVTSGGTIPDRGM+ V L GE G+RRVGELDEEMVYESRV D+ TLGA+S Sbjct: 599 RPGAQRLAVTSGGTIPDRGMFGVFLAAGEND-GARRVGELDEEMVYESRVGDVFTLGASS 657 Query: 595 WRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 WRI +I RDQVIV PA G + RLPFW G+ GRP ELG+ IG+ G Sbjct: 658 WRILEINRDQVIVAPAAGHTGRLPFWVGDAAGRPVELGKAIGENRRTWGSGTLADIRSAD 717 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 +L + +T AN+ +EQ+ GI+P R +++ER RD+IGDWR+++H+P+GR V+ PWA Sbjct: 718 FL-DAHTRANLDAYYQEQKETAGIIPDERTVLIERFRDDIGDWRVVVHTPFGRGVNAPWA 776 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE-------PEKLLQIVR 767 +A+ ++ G DA VA DDG+V R+P +D + P + L E E L V Sbjct: 777 LALGAELNRRTGIDAMAVAGDDGMVLRLPYSD-EPPGMELLLGEGYSGAERAEATLADVM 835 Query: 768 EAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILET 827 E VGSSALFAARFRE AARALL+P R PG R PLWQQR RA+QLL++A+ +P+FPV++ET Sbjct: 836 EEVGSSALFAARFRESAARALLLPRRNPGKRQPLWQQRQRAAQLLDVAREHPEFPVMVET 895 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 +REC+ DVY+L L+ L+ L +++++VTT PS FA SLLF Y + FMY+ D+ Sbjct: 896 MRECVHDVYNLDFLKALVANLGQRGVRLAEVTTEAPSAFAESLLFTYTSAFMYEGDSA-- 953 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 RA+ L++D LL +LG + G +LDP +R+V + Q LA GR+A E D+LR Sbjct: 954 -ERAAALAVDPALLAKVLGTREEGMVLDPTAVRRVVDAAQWLAEGRQAASVEQAVDMLRA 1012 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENL--LAVKRIFPAMISGQERLACMDDAARLRDALG 1005 LGP++++ + +R + V LE L L R+ GQ +L ++D LRD LG Sbjct: 1013 LGPLSLDGVRERIEPWAGTVEDSLEQLRELVPTRLIEVHFGGQLKLGAVEDMPLLRDGLG 1072 Query: 1006 VRLPE--SLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL----- 1058 V +P ++ + +V + L LR+++ TA + A EF LG A + L Sbjct: 1073 VPVPPGVAIAAEQVDQVDNAIDQLLLRWMKNRGPTTAAEAAAEFGLGRATSDALLARWAG 1132 Query: 1059 -------QQLREQGLVMNLQQDI-----------WVSDEVFRRLRLRSLQAAREATRPVA 1100 Q+ G ++LQ + +V + RRLR +L AAR + PV Sbjct: 1133 GVQGTGKQRRLSAGHFVDLQAETQHTETQHTETQYVDTGMLRRLRSATLAAARGSLEPVT 1192 Query: 1101 ATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQI 1160 TYA+ L + G+ G + + + +EQLAGV +PAS WE+ + Sbjct: 1193 QQTYAQFLADWHGL----------------GQMQ-REELASALEQLAGVPIPASAWETLV 1235 Query: 1161 LPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDG---LVALHLQEYAAESFTPAEADQA 1217 LPAR+ DY LDELL+TG ++ G + G D + + EY E E Sbjct: 1236 LPARIPDYQPGDLDELLSTGEILAVGSGQAGAKDAWLCFIPAGMAEYLLEGGEGLERGVH 1295 Query: 1218 NRSALQQAIVAV-----LADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVIT 1272 + +VA L GGA+ A ++ Q + E VD ALW L G++ Sbjct: 1296 KETVTTLGMVATQILEHLQRGGAFLAAEL-QSVTGADPEEVD-----AALWELFDAGLVA 1349 Query: 1273 SDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 D +A +RA + R+ R +GR Sbjct: 1350 PDSFAAVRARLAEAGPTGKQAHRAPRRNQGR 1380 >UniRef50_Q67R22 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67R22_SYMTH Length = 1466 Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/1574 (39%), Positives = 849/1574 (53%), Gaps = 169/1574 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F PA R WF F +P+ Q Q W AR E+ L++APTGSGKTLAAFL LD L+++ Sbjct: 7 ETFHPAVRAWFEERFGRPSPPQAQGWPAIARGENVLILAPTGSGKTLAAFLKCLDILYQQ 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++LYISP+KAL D+ RNL+IPL GI + R G +L +RT Sbjct: 67 G------VRREPGVQVLYISPLKALNNDIYRNLEIPLAGIEAKARELGLPLPHLTHAVRT 120 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP QER ++ RNPPDILITTPESLYL+LTSR+R+ LR V VI+DE+HA+ SKRGAH Sbjct: 121 GDTPQQERKEMRRNPPDILITTPESLYLLLTSRSRDILRTVRYVIVDEIHALCTSKRGAH 180 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVP 251 L+LSLERL+ALL RIGLSAT+R +VA +LGG RPVT+V+ A R +R+ VP Sbjct: 181 LSLSLERLEALLPRPPVRIGLSATLRPLEEVARYLGGTGRPVTIVDAGARRELDLRVEVP 240 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 VA+M + E SIWP I +L+ V HRSTIVF +SRGLAE+L + Sbjct: 241 VADMRALP--------------ESSIWPAIYRRVLELVAAHRSTIVFVSSRGLAERLAGQ 286 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 LN L +AR HHGS+S+E R E L Sbjct: 287 LNALAGRE-------------------------------VARVHHGSLSREAREQVEAEL 315 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G L C+VATSSLELGID+GAVDLVIQ+ +P +V+ GLQR+GRAGH +G V+KG P+ Sbjct: 316 KAGRLPCLVATSSLELGIDVGAVDLVIQIESPGTVSRGLQRVGRAGHVLGAVAKGRLLPK 375 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 R DL+++A IV M G LE P LDVLAQQ VA AAMD +VD+ + VRRA Sbjct: 376 YRGDLLETAGIVREMRRGNLEETRVPTGALDVLAQQIVAMAAMDEWRVDDLLALVRRAWG 435 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++DL R L+ML+GRYP+ +F RP++VW+RE G++ R GA+ LAV SGGTIPD Sbjct: 436 YRDLTERQLHGVLEMLAGRYPAAEFRELRPRIVWDREVGVIRGREGARALAVLSGGTIPD 495 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 RG Y+V L EG + ++GELDEE VYESRV D+ LG+ +W+I+ I D+V+ PAP Sbjct: 496 RGYYTVYL-EGSDV----KLGELDEEFVYESRVGDVFLLGSATWQIRAIEHDRVVAAPAP 550 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----DGAFFSGTIPPWLAEENTIANIQG 667 GR R+PFW+GEG GRP ELG +G F +A D +E N+ Sbjct: 551 GRMPRMPFWKGEGPGRPPELGRKLGAFTGEVAARLNDPDLLQWLQAECCLDERAARNLVQ 610 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 + +Q TG+VP R LVLER DE+GD R+ L SP+G RV+ W + I RI L Sbjct: 611 YLRDQVAHTGVVPTDRRLVLERFPDELGDERLALLSPFGGRVNTAWGMVIRARIRQLLQL 670 Query: 728 DASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 +A V SDD I R+P D L + +PE+ + ++ + VG++ LF+A FR A RA Sbjct: 671 EAEVTTSDDVIHIRLPGADRPLDPEILVRVDPEEAVGLLLQEVGATPLFSAHFRMNAGRA 730 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 L++P PG R P W QRL+A+ LL++A+ YPDFP++LET RE L+DV DL L +++ Sbjct: 731 LVLPRPRPGRRRPFWLQRLKAADLLQVARRYPDFPLVLETYREVLRDVLDLEGLRQVLEG 790 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ 907 L GEI+++ V T +PSP A+ +L +VAE+MY+ DAP AER ++L+L+ ELL LLG Sbjct: 791 LASGEIELAVVETDSPSPMASQILLQFVAEYMYEGDAPKAERHGALLTLNRELLDELLGS 850 Query: 908 VDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEV 967 ELLDP+ I V L+ A G + +G + + DLLR G MT +LA G S E Sbjct: 851 GALRELLDPRAIAAVAARLRGQAEGWQPRGPDEVEDLLRRAGDMTEAELAA--AGVSPEW 908 Query: 968 ASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDL 1027 + LE R+ A +DDA+ R R + ++ Sbjct: 909 LARLEAERRAVRLIGAGRGDGAHWVHVDDASLYR-----------------RPEADVAEV 951 Query: 1028 FLRYLRAHALVTAEQLAHEF------SLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVF 1081 RY RAH +++A + A +L + EV Sbjct: 952 VRRYARAHGPFRPDEVARRYALAEEDVAAAAEALATAGELAAGEFTRGATGREYCDPEVL 1011 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPAT-----------------DGSPAL 1124 R++R ++L R PV YAR LLE G+ P T +G P Sbjct: 1012 RQIRRQTLTLLRAEVEPVDGAAYARFLLEWHGLRPPTPGSGAPGGAGPGGAWTNEGPPGA 1071 Query: 1125 F--ASTSPGVYEGV----DGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLA 1178 + PG V ++R + QL G+ LPA LWE +ILP RV Y LD+LLA Sbjct: 1072 VPPGTRPPGAALPVGSPPQALLRALRQLQGIPLPAELWEQEILPRRVPGYQPLWLDQLLA 1131 Query: 1179 TGAVIWSGQ--KKLG---EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADG 1233 G V W G K+L DD A E TP +A ++A Sbjct: 1132 AGEVHWVGSPGKRLAFYLPDDVHAFAGRLAAAPEGLTPVQAQ----------VLAACRAA 1181 Query: 1234 GAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTST 1293 GA F +++R E++ EALW L W G++T+D +AP+R + RS AR S Sbjct: 1182 GAAFLGTVARRAGLTPAEAL------EALWELAWMGLVTNDTYAPVREVLRSDRTARRSG 1235 Query: 1294 RRSHRARRGRPVYAQPVSPRVSYNTPNLAGRW----SLLQVEPL---NDTERMLALAENM 1346 R + R G GRW SLL +P +R+ A + Sbjct: 1236 RAAAVLRGG-------------------TGRWWPTGSLLAGDPPAAGQPADRVEGYARLL 1276 Query: 1347 LDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL 1406 LDRYG+++R+AV A++ P + + R ME G + +G FV GL G QFA ++RL Sbjct: 1277 LDRYGVVTREAVAADDGPAPWGEVLQQLRRMEWRGEVRQGYFVAGLTGVQFARADAVERL 1336 Query: 1407 RDLATQATQTRHYTPVALSANDPANVWGNLLPWP-AHPATLVPTRRAGALVVVSGGKLLL 1465 R A P+ ++A DPAN +G +LPWP VP+ LV+ G +L Sbjct: 1337 RG----ARGRTGAPPLLVNACDPANPYGTVLPWPEGERLARVPS---NYLVLADGRPVLG 1389 Query: 1466 YLAQGGKKMLVWQEKEELLAPEVFHALTTALR----REPRLRFTLTEVNDLPVRQTPMFT 1521 G + + + KE+ LA E ALT L+ R R + D+PV+++P Sbjct: 1390 VEGHGSRLIPLVPLKEDRLA-EALAALTGLLKAPGAARLRRRIEVRRWGDMPVQKSPAAE 1448 Query: 1522 LLREAGFSSSPQGL 1535 LR GF SP+GL Sbjct: 1449 PLRALGFEPSPRGL 1462 >UniRef50_D2NPL8 Lhr-like helicase n=2 Tax=Rothia mucilaginosa RepID=D2NPL8_9MICC Length = 1920 Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/1421 (40%), Positives = 771/1421 (54%), Gaps = 233/1421 (16%) Query: 274 EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF 333 E SIWP ++ I+D + +RSTIVF NSRGLAEKLTA LN+++ R+ +A A Sbjct: 432 ETSIWPRVQERIVDHIENNRSTIVFVNSRGLAEKLTAALNDIHLRRV-----LAKQAISP 486 Query: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 E + + + +AR+HHGSVSKEQR + E+ALK G LRCVVATSSLELGIDMG Sbjct: 487 EDYAAGICDIAEVPP--LARAHHGSVSKEQRTLIEEALKGGTLRCVVATSSLELGIDMGH 544 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN 453 VDLVIQVA P SVAS LQR+GRAGH+VG +S+G F+P+ R DL+ + V + M +G LE Sbjct: 545 VDLVIQVAAPPSVASALQRVGRAGHRVGEISRGFFYPKHRGDLLGATVTLAGMRSGTLEP 604 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 L P NPLDVLAQQTVAA A+ + VD WY +RR+AP+ +LPR +FD+ L+ML+GRYPS Sbjct: 605 LAIPTNPLDVLAQQTVAACALGPISVDSWYEALRRSAPYAELPRALFDSVLEMLAGRYPS 664 Query: 514 GDFSAFRPKLVWNRE------TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAG 567 +F+ RP+++W+R +G + RPGAQ LAVTSGGTIPDRG++ V L +E+ G Sbjct: 665 DEFAELRPRIIWDRTPTEEAPSGSIEGRPGAQRLAVTSGGTIPDRGLFPVYLVSSDEERG 724 Query: 568 SRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGR 627 +RVGELDEEMVYESR ++ITLGA+SWRI++IT D V V+PAPG+ ARLPFW G+ GR Sbjct: 725 PKRVGELDEEMVYESRAGEVITLGASSWRIEEITHDAVRVSPAPGQPARLPFWHGDRMGR 784 Query: 628 PAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN-----TIANIQGLIEEQRNATGIVPGS 682 P LG G F L+ T E+ + N+ + EQR +TG VP Sbjct: 785 PYALGVQTGAFTRALSSLDATDSTAARQQLEQLGLDTWAVDNLLAYLREQRESTGAVPSD 844 Query: 683 RHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARI 742 +++ER RDE+GDWR++LHSP G VH PWA+A+ RI +G DASV+ASDDG++ R+ Sbjct: 845 TRMIVERHRDELGDWRVVLHSPLGYGVHAPWALAVRARIEERYGVDASVMASDDGLILRL 904 Query: 743 PDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLW 802 P + P A +FLF+P++L IV E VG SALFA+RFRE AARALL+P R PG RTPLW Sbjct: 905 PAMEDVPPGADLFLFDPDELEAIVTERVGDSALFASRFRENAARALLLPRRDPGKRTPLW 964 Query: 803 QQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTT 862 QQR RA+QLL++A+ YPDFPV+LET RECLQDVYD+PAL ++ R L + + +V T Sbjct: 965 QQRQRAAQLLDVARKYPDFPVLLETARECLQDVYDVPALVQVHRSLQSRAVSMLEVETNE 1024 Query: 863 PSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQV 922 PSPFA +LLF YVAE +Y DAP AERRA+ LSLD LL LLG +LLDP V+ Q Sbjct: 1025 PSPFARTLLFEYVAEHLYDGDAPAAERRAAALSLDPALLAELLGSSGLRDLLDPAVLVQT 1084 Query: 923 EEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR----------------------- 959 ++ LQR RA G EG+ DLLR+LGP++ +L+ R Sbjct: 1085 QQRLQRTGERYRACGVEGVADLLRQLGPLSARELSLRLRSDNPPTEAPGIEHEDSENYGE 1144 Query: 960 -------HTGSSEEVASYLENLLAVKRIFPAMISG------QERLACMDDAARLRDALGV 1006 S E+ E L+ +R F M + Q A ++DAARLRD LG+ Sbjct: 1145 EYGEEYGAHASVEQARELAEQLVRSRRAFSFMGAADGSTEPQLYYAAVEDAARLRDGLGI 1204 Query: 1007 RLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFS----LGIAIV-------- 1054 +LP L V+ PL DL RY R H TA+Q A FS +G+ ++ Sbjct: 1205 MPAAALPAALLESVAEPLEDLVSRYARTHIPFTAQQAAEHFSRLTPVGVGVLTPVLQRLQ 1264 Query: 1055 --------EEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYAR 1106 E + LR G V WV +V R +R RSL A RE PV+ Y Sbjct: 1265 QQRRLSSGEFLPEVLRASGAVGVE----WVDTQVLRTIRARSLAALREEIEPVSVQVYGV 1320 Query: 1107 LLLERQGV----------LPATDGSPALF------------------ASTSPGVYEG--- 1135 L Q V LP A AS +P G Sbjct: 1321 FLPSWQNVRSLSVRIAQTLPEASAYGAFIPSRRAATVVGERVAPLGSASFNPTAENGTTH 1380 Query: 1136 --------VDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQ 1187 + ++ I+QLAGV +PAS E+ ILPARV Y MLDEL+A+G V ++G Sbjct: 1381 ASQDSTSATEDLLTAIDQLAGVRVPASALETLILPARVPGYQPHMLDELMASGRVFFTGA 1440 Query: 1188 KKLG-----EDDGLVALHLQEYAAESFTPAEADQANRS-------------ALQQAIVAV 1229 +LG + DG + LHL E ++ + +Q R+ L+ AI Sbjct: 1441 GQLGGGSAQKSDGWIRLHLSESSSLTLGEDYPEQLVRAENPELWEALQTPGTLEHAIYEA 1500 Query: 1230 LADGGAWFAQQISQRIRDKIGESV---------DLSALQEALWALVWQGVITSDIWAPLR 1280 LA GG F + +R+ + + D + + ALW LVW G +T+D +AP+R Sbjct: 1501 LAHGG-LFVPALRERVTQLMSAAAPAGQVVTFPDAAEVSAALWRLVWSGAVTNDSFAPVR 1559 Query: 1281 AL-----------------------------------------------TRSSSNARTST 1293 A+ S S + + Sbjct: 1560 AMLAGVRSAHPTPAAPARLSRVGRRGAGRIAAARASMGNAMAGGYGTDGYSSGSYSAPAA 1619 Query: 1294 RRSHRARRGRPVYA--QPVSPRVSYNTPNLAGRWS----LLQVEPLNDTERMLALAENML 1347 R R+ RG + +P V+ P +GR+S LLQ EP+ T LA A+ +L Sbjct: 1620 GRGLRSLRGHSLRGGLHAAAPAVA---PQDSGRFSRVDTLLQ-EPVEATVAALARADLLL 1675 Query: 1348 DRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR 1407 DRYG+++R + E+ GGF + + + ED + RG F+EGLG AQFA T+D LR Sbjct: 1676 DRYGVLTRGCLQVEDSAGGFSQLYRIYSAAEDRALVRRGYFIEGLGAAQFAAPATVDLLR 1735 Query: 1408 DLAT--------QATQTRHYTP--------------VALSANDPANVWGNLLPWPAHPA- 1444 A Q YTP L+A DPAN +G L WPA P+ Sbjct: 1736 STADNLSVPASPQGFGASAYTPQRTDTEQVYGTFTVTLLAATDPANPYGAALSWPAIPSF 1795 Query: 1445 --------TLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVW 1477 P R+AGA VV+ G +LY+ +G K +L + Sbjct: 1796 AHEGAGTVKHRPARKAGACVVLVDGAPVLYVERGAKTLLAF 1836 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 140/243 (57%), Positives = 168/243 (69%), Gaps = 10/243 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS RDWF F PTA Q W + L+IAPTGSGKTLAAFL++LD L RE Sbjct: 69 FSTPVRDWFRATFSAPTAAQEGAWESIRNGNNTLIIAPTGSGKTLAAFLWSLDALHRE-- 126 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET--EVNLRVGIRT 132 EA +RILYISP+KALG DV+RNL+ PL GI R G E ++ VG+R+ Sbjct: 127 ---HEAGTAGGTRILYISPLKALGADVERNLRAPLAGIT---RLSGNNTGEPSISVGVRS 180 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTPA+ER +L NPPDILITTPESLYLMLTS AR TL GV TVI+DE+H +A +KRGAH Sbjct: 181 GDTPARERRQLISNPPDILITTPESLYLMLTSAARNTLAGVTTVIVDEIHNLAATKRGAH 240 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 LA+SLERLDALL AQRIGLSATV + VA FLGG +PV +++ P + +R+ VPV Sbjct: 241 LAVSLERLDALLAKPAQRIGLSATVENPEAVARFLGGIQPVKIMSRPVAKEWDLRLSVPV 300 Query: 253 ANM 255 +M Sbjct: 301 PDM 303 >UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ98_KYTSD Length = 1660 Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust. Identities = 593/1362 (43%), Positives = 782/1362 (57%), Gaps = 128/1362 (9%) Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES 335 SIWP++E I++E+ RH ST+VF NSR AE+LTARLNE++A R+ + + A AA + Sbjct: 319 SIWPHVEHRIVEEIARHTSTLVFCNSRRSAERLTARLNEIWAERVALADTDAGSAAEADE 378 Query: 336 TSGA------TSNRVQSSD------------------VFIARSHHGSVSKEQRAITEQAL 371 +G ++ RV +S +AR+HHGSVSKE RA E AL Sbjct: 379 GAGGGDTDRGSAGRVTASSPRSPAEMMAQAGASAGAPAVLARAHHGSVSKEHRAEIEDAL 438 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G L VVATSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAGHQVG VS+G F Sbjct: 439 KAGTLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSRGSFHAL 498 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 R+DL+++AV+VE M +G +E L P NPLDVLAQQ VAA AMD V E ++ VRRAAP Sbjct: 499 HRQDLLETAVVVEQMRSGGIEALRIPANPLDVLAQQVVAACAMDDWSVGELHTMVRRAAP 558 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 W DL R V ++ L+ML+GRYPS DF+ RP+LVW+R +LTARPGAQ LA+ SGGTIPD Sbjct: 559 WSDLSRAVLESVLEMLTGRYPSEDFADLRPRLVWDRVDDLLTARPGAQRLAILSGGTIPD 618 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 RG++ V L RRVGELDEEMVYESRV D+ TLG +SWRI+ IT DQV+V+PAP Sbjct: 619 RGLFGVFL--AGGGGPGRRVGELDEEMVYESRVGDVFTLGTSSWRIEDITHDQVLVSPAP 676 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG--AFFSGTIPPWLAEENTIANIQGLI 669 G+ +LPFW G+G GRPAELG +G F+ LA G A + +E + N+ + Sbjct: 677 GQPGKLPFWHGDGLGRPAELGGHLGAFVRELATGDEATLRARLTDGGLDEWAVDNVLAHV 736 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 Q AT VP R +V+ER RDE+GDWR+++HSP+G VH PWA+ +A R+ +G D Sbjct: 737 AAQAEATTAVPDDRTVVVERFRDELGDWRVVIHSPWGSPVHAPWALVLAERLRQRFGVDV 796 Query: 730 SVVASDDGIVARIPDTDG----KLPDAA-------------------------------- 753 + +DDGIV R+PD G +PDA Sbjct: 797 QALHADDGIVLRLPDLGGWDAWAVPDAVAPAGAPGGGAGGPVGAPGDGADAAASGTVALD 856 Query: 754 ----------IFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQ 803 + +PE++ V +G SALFA+RFRECAARALL+P R P R LWQ Sbjct: 857 ARSLDVALGELVALDPEEVHDEVTALIGGSALFASRFRECAARALLLPRRRPDRRQALWQ 916 Query: 804 QRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTP 863 QR RA+ LLE+A G+P+FP++LE +RE +QDVYD+PAL LMRRL G E+++S V T T Sbjct: 917 QRQRAASLLEVAAGHPEFPIVLEAVREVVQDVYDVPALTALMRRLAGREVRLSFVETPTA 976 Query: 864 SPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPG---ELLDPQVIR 920 SPFA +L+FGYVA+F+Y+ D+PLAERRA+ L+LD LL +LLG+ D +LLDPQ + Sbjct: 977 SPFAQNLMFGYVAQFLYEGDSPLAERRAAALALDPTLLADLLGRSDGTQLRDLLDPQAVA 1036 Query: 921 QVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRI 980 E ELQ A RRA+ E L DLLR LGP+ +LA R + A++ L +RI Sbjct: 1037 DTEAELQHTAVDRRARHAEDLADLLRVLGPLDDAELAARSVPEGDP-AAWTAELEGARRI 1095 Query: 981 FPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTA 1040 + G++ A ++D ARLRDALGV +P +P+ + + PL DL +R+ R H A Sbjct: 1096 VRVPVGGRDCWAVVEDVARLRDALGVPVPPGIPQAAMVVSTDPLTDLLVRHARTHGPFRA 1155 Query: 1041 EQLAHEFSLGIAIVEEQLQQLREQGLVM----------------NLQQDIWVSDEVFRRL 1084 E LA + LG A+V L++L G V + D +D V RRL Sbjct: 1156 EALAERYGLGRAVVVAALRELVRSGRVGEGALLPTALGGRDTDDGVGPDFCDAD-VLRRL 1214 Query: 1085 RLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIE 1144 R RSL A R PV +AR +L QG+ PG GVD V R +E Sbjct: 1215 RRRSLAALRAEVEPVDGDDFARFVLRWQGL-------------EDPG--RGVDAVARALE 1259 Query: 1145 QLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEY 1204 QL G LPAS ES +LPARVRDY+ MLDELLATG +W L DD V+ H + Sbjct: 1260 QLTGAVLPASAVESVVLPARVRDYAPGMLDELLATGEFLWVSHGLLAGDDLWVSFHPADQ 1319 Query: 1205 AAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSA---LQEA 1261 A + A+ D S L + ++ + Q R + V LS +A Sbjct: 1320 AEATLPLAQEDPDRASGLVRELLTTRGAMRWADLRTAHQGARADDADPVHLSTDTQWTDA 1379 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR-RGRPVYAQPVSPRV-----S 1315 +W LV QG T D +AP+RA + + R+ RAR GRP Q +S Sbjct: 1380 VWDLVGQGRATCDTFAPVRARLAGGRTTQKTRPRARRARLSGRPASLQGLSGAAVRRDRP 1439 Query: 1316 YNTPN-LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLC 1374 +TP+ LAGRWS+L + T R +A AE LDR+G+++R AV AE + GGF ++ + Sbjct: 1440 VSTPDVLAGRWSVLPERDDDPTVRAVAAAEVALDRHGVVTRGAVAAEEVAGGFSALYKVL 1499 Query: 1375 RSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWG 1434 + ED+GR+ RG FV+GLG AQFA +D LR Q R + LSA DPA V G Sbjct: 1500 AAAEDAGRVRRGYFVDGLGAAQFATAGAVDLLR-----GEQPRVQARL-LSACDPAVVHG 1553 Query: 1435 NLLPWP-AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALT 1493 LPWP P+R+AGALV + G ++ +GG+ L + E LA A Sbjct: 1554 AALPWPETTGGGHRPSRKAGALVALVEGVPAVWWERGGRTALTFTLDPEALAQAAEVAAR 1613 Query: 1494 TALRREPRLRFTLTEVNDLPVR-QTPMFTLLREAGFSSSPQG 1534 R T + +R ++P+ L AGF ++P+G Sbjct: 1614 AVRERRIAGLSVETIDGEAALRTESPLVAALEAAGFGATPKG 1655 Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 133/246 (54%), Positives = 166/246 (67%), Gaps = 4/246 (1%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FSP TR WF F PTA Q W +R E+ +V+APTGSGKTL+AFL++LDR G Sbjct: 9 FSPPTRAWFEANFAAPTAAQAGAWDAISRGENTVVVAPTGSGKTLSAFLWSLDRFVPHGD 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + EA ++Y+SP+KAL DV+RNL PL GI R G + V +R+GD Sbjct: 69 QQRPEA----PCSVIYVSPLKALAVDVERNLSAPLSGIGHAATRLGGEAPQVSVSLRSGD 124 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER + D+LITTPESLYL+LTSRARE L GV TVI+DEVHA+AG+KRGAHLA Sbjct: 125 TPAAERRRFASGGADVLITTPESLYLLLTSRAREQLTGVTTVIVDEVHALAGTKRGAHLA 184 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLDA+L AQRIGLSATVR +V +L G RPVT+V PPA + ++ + V + Sbjct: 185 LSLERLDAMLERPAQRIGLSATVRPVDEVGRWLTGGRPVTIVQPPAEKAWELSVHADVPD 244 Query: 255 MDDVSS 260 M D+S+ Sbjct: 245 MADLST 250 >UniRef50_A0LV08 DEAD/H associated domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LV08_ACIC1 Length = 1534 Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/923 (51%), Positives = 623/923 (67%), Gaps = 46/923 (4%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F+P R WF F PTA Q + W V A +HAL+IAPTGSGKTLAAFL+++ RL Sbjct: 1 MFTPLLRRWFTTTFGAPTAAQAEAWRVIAGGDHALLIAPTGSGKTLAAFLWSIHRLL--- 57 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL---RVGI 130 T + +R+LY+SP++AL D++RNL+ PL I RR ET V L R+G+ Sbjct: 58 ---TEPRAEPPAARVLYVSPLRALAADIERNLRAPLTAI---RRLATETGVQLPDIRIGV 111 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRG 190 RTGDTP+ +R L +NPPDILITTPESL+L+LTS+AR+ LRGV+TVIIDE+HA+AG+KRG Sbjct: 112 RTGDTPSAQRRALVKNPPDILITTPESLFLLLTSQARDMLRGVDTVIIDEIHALAGNKRG 171 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 AHLALS+ERL+ALL AQRIGLSATVR ++ A FLGG RPV V++P A + IR+ V Sbjct: 172 AHLALSMERLEALLRRPAQRIGLSATVRPPAEAARFLGGGRPVRVIHPSARKELDIRVSV 231 Query: 251 PVANMDDVSSVASGTGE--DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 PVA+M G + D+ SIWP+I T ++D + HRSTIVFTNSR LAE+L Sbjct: 232 PVADMTSPPDPPPGAADEPDADTPARSSIWPHIVTRLVDLITAHRSTIVFTNSRRLAERL 291 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 TA+LN+ A R G +AR+HHGSVS+EQR +TE Sbjct: 292 TAQLNDEAARR------------------GIPGE--------LARAHHGSVSREQRHVTE 325 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + LKSG + VVATSSLELGIDMGAVDLV+ P SVA+ +QR GRAGHQ VS+G+ Sbjct: 326 ELLKSGRIPAVVATSSLELGIDMGAVDLVVHAEPPPSVAAAMQRFGRAGHQRDAVSRGII 385 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP+ R L+ +AV+VE M GR+E + P NPLDVLAQQ VA AA D D+ ++ VRR Sbjct: 386 FPKHRSQLIPAAVVVERMRDGRIEAVRVPENPLDVLAQQLVAMAATDDWSDDDMFTLVRR 445 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 AAP+ L VFDA L ML+GRY S DF+ F+ ++ W+R +G +TARPGA+LLAVT+ GT Sbjct: 446 AAPFHTLRPNVFDAVLAMLAGRYASDDFAQFKARIDWDRSSGRVTARPGARLLAVTNAGT 505 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPDRG Y+V+L ++ RVGELDEEMVYESR + TLG+ WRI IT D+V+V Sbjct: 506 IPDRGQYTVVLAGADKPT---RVGELDEEMVYESRPGTVFTLGSAQWRIVDITADRVVVV 562 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIANIQ 666 PAPG +A PFW G+ RP +LG IG+ L +L+ D + + +E + N Sbjct: 563 PAPGAAAIPPFWHGDAPARPFDLGRAIGETLRVLSSTDQVTATAALRDAGFDELAVNNAL 622 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 + +QR ATG+VP + +V+E RDE+GDWR+++HSP+G +VH PWA+AIA RI +G Sbjct: 623 RYLADQRAATGVVPDDQTIVVEWFRDEVGDWRLVVHSPFGGQVHAPWALAIAARIRQRYG 682 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 + +V+ +DDGIVAR+P D + PD + +P++ +R + +SALFAA+FRECAAR Sbjct: 683 IETAVMHADDGIVARLPAAD-RPPDLDLVTIDPDEAADAIRGELTNSALFAAKFRECAAR 741 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 ALL+P R P RTPLWQQR RA+QLL A PDFP++LE +REC +V+D+P L+R++R Sbjct: 742 ALLLPRRFPQRRTPLWQQRQRAAQLLSAAVDLPDFPIVLEAVRECWHEVFDVPGLQRILR 801 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLG 906 + I + V T PSPFA SLLFGY+A ++Y++D P AER+ L+LDS LL LLG Sbjct: 802 DIAAHRIAVVGVETPVPSPFARSLLFGYLAAYLYENDVPPAERKVHALALDSALLTQLLG 861 Query: 907 QVDPGELLDPQVIRQVEEELQRL 929 + D E+LDP ++ VE+EL L Sbjct: 862 EHDFAEILDPGIVAAVEQELASL 884 Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 174/496 (35%), Positives = 228/496 (45%), Gaps = 62/496 (12%) Query: 1058 LQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVL-P 1116 L G+++ + ++ R LR RSL R PV A +AR L Q V P Sbjct: 926 LDHFVTTGVLVRSGAGEYCDADILRTLRRRSLAKLRAEIEPVPARAFARFLPSWQHVRRP 985 Query: 1117 ATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDEL 1176 T GVDG+ VIEQL G LPAS E IL R+ Y +LDEL Sbjct: 986 LT----------------GVDGLYAVIEQLRGARLPASELEQAILARRIAGYHPALLDEL 1029 Query: 1177 LATGAVIW-----------------SGQKKLGEDDGLVALHLQEYAAESFTPAEADQANR 1219 A+GAV W SG G DG + L + AA S P Sbjct: 1030 TASGAVTWTGAGARTGSGTRGAGARSGAGTNGPADGWIVLCPTD-AAASLLPPPMPLDEL 1088 Query: 1220 SALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPL 1279 L + +V +LA GA F + I+ R+R +D L+ ALW LV+ G +T+D APL Sbjct: 1089 PVLHRHVVDLLASSGALFFRTIADRVR-----CLDDQELERALWDLVFAGWLTNDTLAPL 1143 Query: 1280 RALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERM 1339 RA R + R R R GRP+ + P P AGRWSL+ ++ R Sbjct: 1144 RA--------RLTQRPGSRPR-GRPILPSRLGP------PTAAGRWSLIGARESDEERRA 1188 Query: 1340 LALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAE 1399 ALA+ +LDRYG+ +R V AEN+ GGF + + +ME +G RG FV LGGAQF Sbjct: 1189 RALAQALLDRYGVAARPVVEAENVRGGFGGIYPVLATMEAAGACRRGYFVTALGGAQFGV 1248 Query: 1400 RLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVS 1459 ID LR A P+ L+A DPAN +G LPWP + V RR A VV Sbjct: 1249 SGAIDALR-----AANRETAGPLVLAAADPANPYGAALPWPEGSSGRV-GRRPEAWVVTV 1302 Query: 1460 GGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPM 1519 G +LY+ GG+ + V + L AL ++R R L VN P+ TP+ Sbjct: 1303 DGAPVLYVESGGRGIDVLTADADALL-AAIEALAASVRAGETGRLQLERVNGRPILGTPL 1361 Query: 1520 FTLLREAGFSSSPQGL 1535 LR+ GF +P GL Sbjct: 1362 AETLRDKGFRPTPPGL 1377 >UniRef50_D0WMV8 Putative DEAD/DEAH box helicase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMV8_9ACTO Length = 1780 Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/913 (51%), Positives = 583/913 (63%), Gaps = 81/913 (8%) Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 VG+RTGDTPA+ER +L NPPDILITTPESLYLMLTS AR+TL V TVI+DE+H++AGS Sbjct: 191 VGMRTGDTPAKERRRLRVNPPDILITTPESLYLMLTSEARKTLGAVSTVIVDEIHSLAGS 250 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRG HLALSLERLD LL AQRIGLSATV A VA FLGG RPVT+V + P + Sbjct: 251 KRGTHLALSLERLDGLLEEPAQRIGLSATVSPARTVADFLGGSRPVTIVEADSAASPDVA 310 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + VPVA+M + AS G+ S+WP+IE ILD VLRHR+T+VF NSRG E+ Sbjct: 311 VSVPVADMAAIPP-ASVAGQMVV-----SMWPHIERAILDHVLRHRTTVVFVNSRGACER 364 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV------------------ 349 LTA LNE YA R + A F ++ A + V+S + Sbjct: 365 LTAHLNEEYANRFGGAEGSEAAADRFAGSAAAVGS-VKSVEAHRQTQGRPGAGRKGLPAG 423 Query: 350 -----------------------FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 IA++HHGSVSKEQR E LKSG LRCVVAT+SLE Sbjct: 424 PGAHRQSWGSGDSNYSTPPPETPVIAKAHHGSVSKEQRLAVENELKSGSLRCVVATASLE 483 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM 446 LGIDMG++DLV+QVA P SVASGLQRIGRA H VGG +G +P R LVD+AV E M Sbjct: 484 LGIDMGSIDLVLQVAPPPSVASGLQRIGRANHAVGGRPRGAIYPVERTHLVDAAVAAEGM 543 Query: 447 FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 G +E N LDVLAQQTVAA +++ D W+ VRRAAP+ LPR FD+ L++ Sbjct: 544 RTGAIEETELVANALDVLAQQTVAAVSVEETPADRWFETVRRAAPYAALPRESFDSVLEL 603 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 LSG Y S D + F P++VW+RE G+L ARPGAQ LAV+ GTIPDRGM+ V+LPEG E+A Sbjct: 604 LSGAYASADLADFSPRIVWDREAGVLRARPGAQRLAVSFSGTIPDRGMFPVVLPEGAEEA 663 Query: 567 GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE--- 623 G RRVGELDEEMVYESRV D++TLG +SW+I++I D+V+V GRS+RLPFWRGE Sbjct: 664 GRRRVGELDEEMVYESRVGDVVTLGTSSWQIREIANDRVVVDHVSGRSSRLPFWRGEGPG 723 Query: 624 -----------------------------GNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 G RPA+ E A F + Sbjct: 724 RAASAGAAKGAFLREAEASLELASSPEAAGGRRPADNPESSASVRSEPHVSASFLSRLES 783 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 +EN N+ L+ EQ+ ATG +P LVLERCRDE G WR +LHSP GRRVHEPWA Sbjct: 784 AGLDENARENLVSLLLEQKAATGAIPSDETLVLERCRDENGSWRFVLHSPMGRRVHEPWA 843 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 +AI RI + + + ASDDGI ++P T G+ P A + +F+ E+L ++V +G +A Sbjct: 844 MAIRERIRRVAKIEPQMFASDDGIAFQLPATVGRPPGAELVVFDAEELRRLVTSRIGGTA 903 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQD 834 LFAARFRECAARALL P PG RTPLW QRLRA QLLE ++ + +FPV +E RECLQD Sbjct: 904 LFAARFRECAARALLTPSSRPGRRTPLWLQRLRAGQLLEASRQFRNFPVSVEAARECLQD 963 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 VYDLPAL LM R+ ++I + T +PSPFA LLFGY F+YQ D P AERRA +L Sbjct: 964 VYDLPALAGLMERVEARSVRIVEAETASPSPFAHPLLFGYTGAFLYQEDLPRAERRAHLL 1023 Query: 895 SLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE-EGLFDLLRELGPMTV 953 SLD E + +L+G G++LD V+ +VE ELQRLAPGRR + + E + DLLR LGP+T+ Sbjct: 1024 SLDPEAIASLVGDGGVGQVLDESVLAEVEAELQRLAPGRRVRRDAEAVADLLRRLGPLTL 1083 Query: 954 EDLAQRHTGSSEE 966 E +A R G+ ++ Sbjct: 1084 EGVAARSVGACDD 1096 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 208/651 (31%), Positives = 287/651 (44%), Gaps = 95/651 (14%) Query: 958 QRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPE------S 1011 Q +SE V S LE L +R+ + G+E A +DA LR ALGV +PE Sbjct: 1146 QEEAAASEAVRSLLEELAQSRRVVSVRLGGRECWAGAEDAPALRLALGVDVPEWAAEPGG 1205 Query: 1012 LPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ 1071 LP S PL DL LR R A +TA A EF +G A E L+ L E G +M + Sbjct: 1206 LPCTSAVSRS-PLEDLLLRCARTRARITAAAAAAEFGIGRATAAEALESLAESGSLMRID 1264 Query: 1072 QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPG 1131 W+ VF R+R RSL AR A PV RL+LER G+ PG Sbjct: 1265 DAHWMEASVFARVRNRSLARARAAIEPVRPAALHRLVLERAGI-------------DRPG 1311 Query: 1132 VYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG 1191 G+D + I + GV LPASLWES + PARV DYS MLDEL+ +G V+W Q + G Sbjct: 1312 --RGIDALAEAISLMEGVWLPASLWESVVFPARVADYSPGMLDELILSGDVLW--QARSG 1367 Query: 1192 EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGE 1251 + G + ES A+ A+++ + A G F S + G Sbjct: 1368 GESGRASSEASRTGKESGR--LANDASQTGGEPAKTGGAPVGEIAFFPTDSP-LAPVAGA 1424 Query: 1252 SVDLSALQ-EALWALVWQGVITSDIWAPLRALTRSSSNARTS------------------ 1292 +V + E LW L +G T+ + P+RA + + A Sbjct: 1425 AVSADDVGWEDLWKLAREGAATALSFEPVRACLQPRAAAPKKRRVTSRRSRRYAAFAAAR 1484 Query: 1293 --TRRSHRARRGRPVYA-QPVSPRVSYNTPN-------------LAGRWSLLQVEPLNDT 1336 + + G P QP + ++ ++P L W L+ ++ Sbjct: 1485 ALSTEAQGIDSGGPAQGTQPGNSQLRQSSPGKCPAGVERLEAAMLQTTWRRLRPPRVSAE 1544 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 E +A+ E++LDRYG++SR +A +PGG S+ + R MED+G ++RG FV GLG Q Sbjct: 1545 EAAVAMVESLLDRYGVVSRDIALAAGVPGGMASLTPVLRRMEDAGAVLRGTFVRGLGPVQ 1604 Query: 1397 FAERLTIDRLRDLA-------TQATQTRHYTPVA--LSANDPANVWGNLLPWP------- 1440 +AER T+D LR A +A P A L DPA + G +PWP Sbjct: 1605 YAERGTLDALRSFADSPSDADVRAAGEGDSEPAAAVLDFRDPACLMGRGVPWPDPALPSQ 1664 Query: 1441 -------AHPATLV-PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL 1492 A P L P+RR G+ VV+ G+ LY A K LV E AL Sbjct: 1665 IGERLAAAPPVGLPDPSRRPGSAVVLVDGEPALY-APENMKALVSYTPETAAFRSALRAL 1723 Query: 1493 TTALR----REP----RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 T LR R+P R R + VN + + M L EAG + P+G+ Sbjct: 1724 TEFLRRAAARDPGIAARKRTVVESVNGVSALERAMGDALAEAGLARDPRGM 1774 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 62/107 (57%), Positives = 74/107 (69%), Gaps = 7/107 (6%) Query: 15 FSPATRDWFLRAFKQ-PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 FS A+R WFL AF PT+VQ + W R E+ALV+APTGSGKTLAAF A+DRL R Sbjct: 14 FSRASRSWFLSAFPSGPTSVQERAWAAIGRGENALVVAPTGSGKTLAAFFSAIDRLMRRS 73 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 ED REA K R+LY+SP+KAL DV+RNL+ PL G+ ER RG Sbjct: 74 AED-REA---KGVRVLYVSPLKALAADVERNLRRPLAGV--ERAARG 114 >UniRef50_D1NRV9 ATP-dependent helicase II n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NRV9_9BIFI Length = 1644 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/683 (50%), Positives = 461/683 (67%), Gaps = 32/683 (4%) Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA---- 331 SIWP ++ +LD +L HR+T+VF NSRG+AE+LTA++N+LYA R+ A+D A Sbjct: 370 SIWPQVQRSVLDMILEHRTTLVFVNSRGVAERLTAQINDLYAQRVNAGRGDAIDTAWGQH 429 Query: 332 --------HFESTSGATSNRVQSSD--VFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 H S+ G+TS V S + +A +HHGSVSK++R E LK G+LRCV+A Sbjct: 430 GDGPDEPMHRRSSYGSTSMLVSSPEPEATLAMAHHGSVSKDRRKQIEDDLKRGKLRCVIA 489 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TSSLELGIDMG+VDLVIQ+A PLS++SGLQR+GRA H VGG S +F+P TR+++V + Sbjct: 490 TSSLELGIDMGSVDLVIQIAPPLSISSGLQRVGRADHTVGGTSHAVFYPLTRQEIVATGT 549 Query: 442 IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFD 501 VE M +G LE N LDVLAQQTVAAA+++ + VD WY+ VR+AAP+ L R VF+ Sbjct: 550 AVEHMRSGSLEPTMMVRNALDVLAQQTVAAASVEPVSVDTWYALVRKAAPYAGLGRDVFE 609 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 + +L+G Y S +FSAFRP L+ + ++G+++ARPGAQ LAVTSGGTIPDRG+Y+V+LPE Sbjct: 610 TVIKLLTGAYNSEEFSAFRPPLMLDEDSGMISARPGAQRLAVTSGGTIPDRGLYTVVLPE 669 Query: 562 GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWR 621 + G +RVGELDEEMVYE+RV DIITLG ++W++Q+IT D+V+V PAPGRSARLPFW Sbjct: 670 AQAGKGPKRVGELDEEMVYETRVGDIITLGTSTWQVQEITNDRVVVIPAPGRSARLPFWH 729 Query: 622 GEGNGRPAELGEMIGDFLHLLADGAFFSGT-----IPPWLAEE------------NTIAN 664 G+ GR G ++H + G F + T P +E N I + Sbjct: 730 GDQAGRSYTFGLAQAQWMHDMNAG-FLAATNNGTATEPTFNDETLERLHNDGFDDNAIND 788 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 + G + +QR AT ++P + +V+ER R E GDW +++HS GRRVHEPWA+AI R+ Sbjct: 789 LAGFLADQRAATTVIPDATRIVVERTRSEEGDWTVLIHSQLGRRVHEPWALAINARLQQR 848 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 +G + A+DDGIV R+PD DG + F+ + L +IV E VG S LFA+RFRE A Sbjct: 849 YGFSGQIFAADDGIVIRLPDGDGTIDVIGSIRFDVDDLNRIVTEQVGGSVLFASRFREVA 908 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 AR+L MP PG R PLWQQRLRASQLL A+ DFP+I+ET RECLQDVYDLPAL + Sbjct: 909 ARSLFMPRMNPGKRVPLWQQRLRASQLLAAARPIKDFPLIMETTRECLQDVYDLPALREV 968 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 M R+ G+I I +VTT PSP A +L+FG+V MY+ D PLAER +LS+D +L L Sbjct: 969 MGRIGAGQIMIDEVTTDYPSPMAENLMFGFVGSVMYEGDTPLAERNTQLLSMDPAMLEQL 1028 Query: 905 LGQVDPGELLDPQVIRQVEEELQ 927 LG+ D +LD + I + L+ Sbjct: 1029 LGEADYASVLDSESIDETARALE 1051 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 140/261 (53%), Positives = 170/261 (65%), Gaps = 26/261 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ T+ WF + F +PT VQ Q W + LVIAPTGSGKTLAAFL ALD + E Sbjct: 8 FTQQTQRWFEQTFGKPTDVQRQAWPLIRSGADTLVIAPTGSGKTLAAFLAALDTIMCERA 67 Query: 75 -----------------ED---------TREAHKRKTSRILYISPIKALGTDVQRNLQIP 108 ED +++ K K R+LYISP+KALG DV +NL +P Sbjct: 68 RSVSGAVQPRIDHVDLVEDAPQTAKPARSKQRAKTKGVRVLYISPLKALGVDVAKNLDLP 127 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE 168 L+GI+DE G +RV +R+GDT A+ R+ +TR PPDIL+TTPESLYLMLTS+ARE Sbjct: 128 LRGISDEYAAEGLEVPEVRVAMRSGDTDAKARAAITRRPPDILVTTPESLYLMLTSKARE 187 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 LR V+TVIIDEVHAVAG+KRG+HLALSLERLDALL AQRIGLSATV + AAFLG Sbjct: 188 ILRHVDTVIIDEVHAVAGTKRGSHLALSLERLDALLEHPAQRIGLSATVHPMEETAAFLG 247 Query: 229 GDRPVTVVNPPAMRHPQIRIV 249 G RPV +VN +R+V Sbjct: 248 GSRPVQIVNAAGAPSVDLRVV 268 Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 190/588 (32%), Positives = 280/588 (47%), Gaps = 99/588 (16%) Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN------LQQDI--WVSDEVF 1081 RY + HA TA Q+ + ++ L L+E+G V+ + +D+ WV VF Sbjct: 1070 RYAKTHAPFTAAQMIADLNIDAEAAVRALDALKERGEVLQGRFDARMSEDVEQWVHQSVF 1129 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR 1141 R +R RSL+ AR A RPV+A Y R LL+ QGV P ++ +GV+R Sbjct: 1130 RMIRSRSLRRARAAIRPVSAADYQRFLLDLQGVGPVGGQR-----------HDDTEGVLR 1178 Query: 1142 VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW----SGQKKLGEDDGLV 1197 V+EQ GV LP +WE +LPARVR+Y+ MLD L+ G V+W G + D + Sbjct: 1179 VLEQCEGVELPLHVWEGSVLPARVRNYTHAMLDALVLEGTVVWVMGERGVRWYPADSVQL 1238 Query: 1198 A-----LHLQ-EYAAESFTPAE-----------------------------ADQANRSAL 1222 A +H Q E A + T A+ AD RS L Sbjct: 1239 ASWAARVHEQAEQAGSADTDADLSSALDSVVAGESNGEWNGDGETEVQAWLADDTCRS-L 1297 Query: 1223 QQAIVAVLADGGAWFAQQISQRIR------------DKIGESV----DLSALQEALWALV 1266 +AI+AVLA GGA+ A Q++ + D GE V + +++LW LV Sbjct: 1298 CRAILAVLAQGGAYGASQLADLVNERWMDVCEPLVDDGTGELVMPAWTMERFEQSLWRLV 1357 Query: 1267 WQGVITSDIWAPLRA-----------LTRSSSNARTSTRRSHRARRGRPVYA-QPVSPRV 1314 QG++T+ +RA ++ ++ + R +H R R V + + P Sbjct: 1358 RQGLVTNSALEAVRAHETADAGTSSAGGAAAGRSKAAARSAHSVRSMRSVRSIRHRLPAR 1417 Query: 1315 SYNTPNLAGRWSLLQVE-----PLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPS 1369 T LAG W L+ + ++ +R + L E +LDRYG I+ V +PGGF S Sbjct: 1418 MPQTKTLAGLWRLVTGDQELAAEVSAEQRTIDLVEMLLDRYGPIAPALVDMAGVPGGFSS 1477 Query: 1370 MQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDP 1429 + + ME+ G ++RG FVEG G AQFA R T+D LR ++ T H V L+A DP Sbjct: 1478 LYPVLTRMEERGLLVRGMFVEGFGAAQFAVRDTVDVLRGISA----TTHAHAVVLNAIDP 1533 Query: 1430 ANVWGNLLPWPAHPATL-VPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEV 1488 A ++G +PWPA P P R+ G+LVV+ G +++ A GK+++ + E LL Sbjct: 1534 AVLYGAAVPWPALPDDAGKPLRKDGSLVVLRDGVPIVFAALRGKRLMAFSTVESLLESAC 1593 Query: 1489 FHALTTALRREPRLRFTLTEVNDLPVR-QTPMFTLLREAGFSSSPQGL 1535 L + T T N P+R P+F LR AGF+ +PQG+ Sbjct: 1594 AE-LAYQCHQTLGAPVTFTVCNAQPIRVGQPIFHALRAAGFTPTPQGM 1640 >UniRef50_C6CYT0 DEAD/DEAH box helicase domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CYT0_PAESJ Length = 1470 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 496/1573 (31%), Positives = 751/1573 (47%), Gaps = 171/1573 (10%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P+ DWF +F +PT VQ Q W ++ L+ APTGSGKTLAA L LD + R Sbjct: 9 FHPSLADWFEASFGEPTDVQKQAWKAITAGDNTLIAAPTGSGKTLAAVLPCLDGIAR--- 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 ++ ++ R+LYI+P+KAL D+ +L ++ I + LR G+RTGD Sbjct: 66 --MKQQQRQAGVRLLYITPLKALNNDIHDHLVAFIEQIDKLAASSDTSWPGLRSGVRTGD 123 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T + RS + R PPDIL+TTPES+Y++LTS + RE L+ V IIDE+H +A KRG+HL Sbjct: 124 TTSSVRSAMYRKPPDILVTTPESMYILLTSEKGREMLKTVSYAIIDEIHDLAADKRGSHL 183 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG------------------------ 229 ++SLERL+ L QRIG+SAT + + VA FLGG Sbjct: 184 SVSLERLEELCGRRIQRIGVSATQKPLARVARFLGGWQEPAGSQADERQETDSEGFVHPL 243 Query: 230 ---DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286 RPVT+V + ++ + +P D + + RE ++W I + Sbjct: 244 GLVPRPVTIVESHMSKKLEVSLTMP----DQSQPMQT---------RE-AVWLPILDRLF 289 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQS 346 + RS I+F NSR L E+L RLN D A +E Sbjct: 290 ALMSDCRSVIIFVNSRRLCERLCLRLN---------------DHAGYE------------ 322 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 +AR+HHGS++KE+R E+ LK+GELRC+VATSSLELGID+G ++LVIQ+ +P+ Sbjct: 323 ----MARAHHGSIAKERRLEVERMLKAGELRCIVATSSLELGIDVGHIELVIQLDSPIEA 378 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 ASG+QRIGRAGH VG S+G R R L + AV+ + + +E + P + LDVL+Q Sbjct: 379 ASGIQRIGRAGHAVGSASRGAMVARQRGVLPEMAVLGKLIAERDIEPIQIPRDRLDVLSQ 438 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 QT++ A + V + + + R+ ++ P L +L+G YP RP L WN Sbjct: 439 QTISIVASQDMAVSDLHRLIARSDSYRSFPAGKLRGMLQVLAGFYP-----FMRPLLDWN 493 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR-RVGELDEEMVYESRVN 585 R+T +L R + A+T GTIP Y V SR +GELDEE V ESRV Sbjct: 494 RDTDLLVKRRNTMIGALTGAGTIPSSSAYPV------HHVDSRVHLGELDEEFVQESRVG 547 Query: 586 DIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA-- 643 D+ LG W I++I +D+V V+ A R + +PFWR EG GR LG+ +G F+ + Sbjct: 548 DVFQLGMNGWMIRRIDKDRVYVSEASNRFSEIPFWRAEGLGRTYSLGKKVGAFIGEIEER 607 Query: 644 -----DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 + + ++ T + LI Q + + P + +V+E RD + Sbjct: 608 LQREDEDKLIGWLTGQYQMDDYTAQQLLSLIGSQLSNCEL-PTDKRIVIETYRDLMNQTH 666 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE 758 +I+H+P+GRR++ W +AI + L A D+GI +P+ D I+ Sbjct: 667 VIMHNPFGRRLNRTWLLAIERQFELLLPYRLYGNAKDNGIEFVLPEWDSSWLQ-TIWGVT 725 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 P + ++ EA+ S L A FR A +LL+ RTPLWQ+RLR+ +LL A Y Sbjct: 726 PANVEPLLTEAITGSPLLAIAFRHIAETSLLLS--RSFSRTPLWQKRLRSEELLRSALPY 783 Query: 819 PD-FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAE 877 + FP ++E ++ CL + L L L+ + GEI++ T PSP AT L YV Sbjct: 784 AEHFPYLMEAMKACLHEYLSLDDLRALLTAIQEGEIEVLVKETEYPSPMATQFLADYVNM 843 Query: 878 FMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLA-PGRRAK 936 +Y+ D + ++++ EL L G+ + QV+ + E QRL+ P + Sbjct: 844 RIYEGDGLDPAIQMQLMNVSKELAGRLFGEAAIRSAIPEQVL---DAERQRLSEPELELR 900 Query: 937 GEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL--LAVKRIFPAMISGQERLACM 994 + LL+ G + +L Q + E A L LAV R + R C Sbjct: 901 ESSDVIRLLKRRGDLAPGELIQLSDTRALEWAEQLLQTGELAVYRPSQDTPEEEHRWICR 960 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEF-SLGIAI 1053 D+ + E+LPE S+ +R R+ T +L + L +A Sbjct: 961 DER---------EIYEALPESD-EAASFIIR----RFAENRIAFTELELCERYPKLSLAE 1006 Query: 1054 VEEQLQQLREQG------LVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARL 1107 + + +LRE+G ++ ++ IW S R+ S+ AR+ +P + + Sbjct: 1007 AKRLIDKLREEGSLEQAPFAVSPEERIWSSRRAAERMIRLSIGEARKQVQPASPIRWCAQ 1066 Query: 1108 LLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRD 1167 + RQ L G +G+ VIE+L G+ LP S WES I P+RV D Sbjct: 1067 IALRQHALQGAQ-------------LRGSEGLKLVIERLQGIFLPLSHWESVIFPSRVTD 1113 Query: 1168 YSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIV 1227 Y + LD L A G VIW G+K+ E +G VA L + + P A+ +S ++ Sbjct: 1114 YRKDELDLLCAAGEVIWIGKKQPDEKEGKVAFFLAG-SRSIYEPYLAESREKSVSHPELL 1172 Query: 1228 AVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT--RS 1285 +L GA F +++ R K+ V LSAL E LVW+G ++D +APLR LT + Sbjct: 1173 ELLKRSGASFLTRLA-RETGKLPTEV-LSALLE----LVWEGHASNDQFAPLRLLTLKKG 1226 Query: 1286 SSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAEN 1345 A+T + G P S+ +P+ D M + + Sbjct: 1227 KDWAKTGSGLGRWYWTGSLADVLPDEGSSSHTSPD-------------TDPPEMYWV-RH 1272 Query: 1346 MLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDR 1405 +LD YGI++++ + A P + +Q + R +E+ G + RG F++G QF + Sbjct: 1273 LLDTYGIVTKE-LTASVTPYSWDRLQPVLRKLEEWGTLTRGLFIDGAITMQFTTPEVAEL 1331 Query: 1406 LRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLL 1465 +R T T LSA DPAN +G L+ WP R+ G +V+ G + L Sbjct: 1332 IRKPFPSGTPANE-TLTLLSAVDPANPFGLLMEWP-EGFDCSFARKPGHFLVIRGDQWLY 1389 Query: 1466 YLAQGGKKMLVWQEKEELLAP---EVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTL 1522 ++ GK++ + +E P E+ T LRR+ + + N V T L Sbjct: 1390 WMENNGKRIHTMEPREFAKQPSAEELKWIFMTLLRRQHLSKIVVERWNGETVALTDEGKL 1449 Query: 1523 LREAGFSSSPQGL 1535 L+E G S + L Sbjct: 1450 LKEIGAESDQKSL 1462 >UniRef50_C4DG18 ATP dependent helicase, Lhr family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DG18_9ACTO Length = 1534 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 338/630 (53%), Positives = 429/630 (68%), Gaps = 22/630 (3%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR WF F PT Q W AR ++ALV+APTGSGKTL+AFL++LDRL Sbjct: 9 FSRPTRAWFAERFGAPTPAQAGAWEAIARGDNALVVAPTGSGKTLSAFLWSLDRL----A 64 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + ++ R+LY+SP+KAL DV+RNL+ PL GI +E +R G ++ V +RTGD Sbjct: 65 TTPKPEDPKRRCRVLYVSPLKALAYDVERNLRQPLAGIGEEAKRLGVEAPDVSVSMRTGD 124 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA +R R P DILITTPESL+L+LTS AR+ LRG++TVIIDEVHAV G+KRGAHLA Sbjct: 125 TPADQRRAFARTPSDILITTPESLFLLLTSAARDALRGIDTVIIDEVHAVCGTKRGAHLA 184 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L LERLDALL AQRIGLSATVR + A ++GG RPVT+V PPA + ++ + V V + Sbjct: 185 LCLERLDALLPQPAQRIGLSATVRPIEETARYVGGPRPVTIVKPPAAKTIELSVDVTVPD 244 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + D++ V D + SIWP I + D + +RSTIVF NSR LAE+L +RLNE Sbjct: 245 LADLTDV------DEQG--QPSIWPSIVKRLHDLIEANRSTIVFVNSRSLAERLCSRLNE 296 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + ++ A+ + S A + + +AR+HHGS+S+E+R E LKSG Sbjct: 297 VV---VKHDTPYRSQPAYIMAQSSAAAGVMP----VLARAHHGSMSREERLQVETGLKSG 349 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELR VV+TSSLELGIDMGAVDLV+ + +P SVASG+QR+GRAGHQVG VS+G+ P R Sbjct: 350 ELRAVVSTSSLELGIDMGAVDLVVLIGSPPSVASGVQRVGRAGHQVGAVSQGVVLPTHRS 409 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 DL+ + V E M G +E L PP NP+D+L+Q V+ AMD +VD+ VR AAP+ Sbjct: 410 DLLAATVAAERMLDGGIEELRPPSNPIDILSQHLVSMVAMDDWRVDDLARVVRGAAPFAS 469 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 L + LDM+SG+YPS FS +PKLVWNR TG LTARPGAQ LAV + GTIPDRG+ Sbjct: 470 LSDEALRSVLDMVSGKYPSTGFSGLKPKLVWNRATGRLTARPGAQRLAVLNAGTIPDRGL 529 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 Y V L EG GS RVGELDEEM+YESRV D+ LGATSWRI+ IT D+V+V+PAPG++ Sbjct: 530 YGVYLAEG--GTGS-RVGELDEEMIYESRVGDVFLLGATSWRIESITPDRVLVSPAPGQA 586 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLAD 644 AR+PFW+GE GRPAE G IG L L + Sbjct: 587 ARMPFWKGEDVGRPAEFGRAIGVRLRELTN 616 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 336/899 (37%), Positives = 457/899 (50%), Gaps = 71/899 (7%) Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 ++ +N+ +++QR TG VP R +V+ER RDE+GDWR+I+H G RV+ PWA+AIA Sbjct: 688 DSAASNLAAYVDQQREHTGAVPDDRTVVVERFRDELGDWRVIVHCLLGARVNRPWALAIA 747 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 R+ G DA + +DDGIV RIPD P A + FEPE + +IV E + +S LF+A Sbjct: 748 ARLRERLGVDAHAMGTDDGIVLRIPDMTDP-PGAELLAFEPEAITRIVTEQLTASPLFSA 806 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RFRECAARALL+P + G R PLWQQR RA+QL E+A+ + DFP+ E RECL++ +D+ Sbjct: 807 RFRECAARALLLPRKAIGRRQPLWQQRQRAAQLFEVAREFTDFPITAEAARECLEEYFDM 866 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 AL LMR L DV T + SPFA S+L +VA +Y D PLAERRA+ + +S Sbjct: 867 DALTGLMRSLAERSTAAVDVVTESASPFALSILSSFVAGNLYGEDEPLAERRAA--AFNS 924 Query: 899 ELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQ 958 LL LLG+ D +LLDP V+ + E LQ GR G E + +LLR +G + DLA+ Sbjct: 925 GLLDELLGEGD--QLLDPAVVAEAEAWLQ-WRDGRDLSGAEDVAELLRVVGDQSDGDLAE 981 Query: 959 RHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLH 1018 R + ++ Q R ++DA R RD LGV LPE PE+ Sbjct: 982 RGIAVAAAEELEAAGRAVA-----VTVAEQRRWIAVEDAVRYRDGLGVELPELPPELLST 1036 Query: 1019 R---------VSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN 1069 PL DL RY R H + A F L +VE L +L G+V + Sbjct: 1037 NGTGATAGSPTPDPLDDLVARYARTHGPFETAECAERFGLPGPLVEAALHRLDADGVVRH 1096 Query: 1070 --LQQD---IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPAL 1124 QD W + +V R LR ++L A R PV Y L + QGV G A+ Sbjct: 1097 GSYTQDGSRQWCAVDVLRLLRRKTLAALRAEISPVPVAKYVSFLADWQGV-----GGKAI 1151 Query: 1125 FASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW 1184 G D V V++QL G +PAS WES +LP RV +YS LDEL +G ++W Sbjct: 1152 ----------GTDAVADVLDQLQGTAIPASAWESTVLPVRVGEYSPAQLDELTGSGELLW 1201 Query: 1185 SGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQR 1244 SG L DG + E A P ++A L + ++ L + + Sbjct: 1202 SGSGGLPGTDGWLTFAYAE-TAPLLLPLPDEEAIAGDLHRELLDAL---------ESPRF 1251 Query: 1245 IRDKIG--ESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRG 1302 RD G E D L EALW LVW G +++D APLRA S +RR R G Sbjct: 1252 FRDLTGVVEGDDPEVL-EALWDLVWGGWVSNDSLAPLRAKLSGPSPKPQQSRRPRRP--G 1308 Query: 1303 RPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAEN 1362 R + V P+ AGRW L + T R A +LDR+G++ R A A Sbjct: 1309 RFTVTRQA---VRSAPPSAAGRWYRLPDRDTDPTRRAHAATATLLDRHGVVVRGA--AAG 1363 Query: 1363 IPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPV 1422 GF + +ME+ G RG FV GLG AQFAE +DRLR + + Sbjct: 1364 HASGFAGQYPILSAMEERGAARRGYFVSGLGAAQFAEPGAVDRLRSATPKGA-------L 1416 Query: 1423 ALSANDPANVWGNLLPWPAHPATLV---PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQE 1479 L+A DPAN +G +PWPA + R+AGALVV+ G+L Y+ +GG+ +L + Sbjct: 1417 VLAACDPANPFGAGMPWPARSSEESGHRAGRKAGALVVIVDGELAWYVERGGRTILTYTA 1476 Query: 1480 KEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 + AL R R T+T V+ P+ TP+ L EAG ++P+GL +G Sbjct: 1477 DRQRTV-AAAEALVATANRGGLARVTVTHVDGTPIAGTPVGAALTEAGLRATPKGLKFG 1534 >UniRef50_C6MZM9 DEAD/DEAH box helicase-like protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZM9_9GAMM Length = 1403 Score = 622 bits (1603), Expect = e-176, Method: Compositional matrix adjust. Identities = 489/1492 (32%), Positives = 720/1492 (48%), Gaps = 188/1492 (12%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 P + WF PT Q Q W ++ L+ APTGSGKT AAFL +D+L R+ Sbjct: 12 PIVQQWFFEQIGSPTEPQIQGWPQILSGQNTLISAPTGSGKTFAAFLACIDQLVRKAISG 71 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 T + +LYISP+KALG DVQ+NL PL I +++G ++ V +RTGDT Sbjct: 72 TLA----NETEVLYISPLKALGNDVQKNLMGPLNEIVKVAKKQGLAMADINVMVRTGDTS 127 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLAL 195 +ER + + PP IL+TTPESLY++LT+ ++RE LR V+TVI+DE+HA+A KRGAHLAL Sbjct: 128 PKERQAMLKQPPHILVTTPESLYILLTAGKSREILRTVKTVIVDEIHALADDKRGAHLAL 187 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM------RHPQIRIV 249 SLERL+ L RIGLSAT + VA FL G+ PAM +H ++ + Sbjct: 188 SLERLEVLTSFPPLRIGLSATQKPLDVVANFLVGNNRAA----PAMIDIGHAKHLELAVE 243 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 VP++ + V+S IW I I ++RST++F N+R +AE+ Sbjct: 244 VPISELGAVAS--------------NQIWDEIYNRIAQLAEQNRSTLIFANTRRVAERAA 289 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 L E RL + +A HHGS+SK+ R E Sbjct: 290 HHLGE----RLGKDLVVA---------------------------HHGSLSKKLRLEAET 318 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 LK+GEL+ +VAT+SLELGID+G+VDLV Q+ +P S+A LQR+GRAGH G +SKG F Sbjct: 319 KLKNGELKALVATASLELGIDIGSVDLVCQLGSPRSIAVMLQRVGRAGHWHGAISKGRIF 378 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 TR +L++ A IV + G L+ L PH P+D+LAQQ VA A + +D+ + VR A Sbjct: 379 ATTRDELLECAAIVNAIQDGDLDQLVIPHEPIDILAQQIVATCATEDWLIDDLFLLVRHA 438 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 +KDL R FDA ++ML+ +G + L ++R G+L R G++L+A+TSGG+I Sbjct: 439 FHYKDLSREQFDAVINMLAEGI-AGSRGRYGAYLFYDRVHGMLKGRRGSRLVAITSGGSI 497 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI--TRDQVIV 607 PD G+++V + +A S VG LDE+ ES D+I LG+TSW+I +I T+ QVIV Sbjct: 498 PDNGLFTV-----KTEAPSIVVGTLDEDFAVESNRGDVILLGSTSWKINRIESTKGQVIV 552 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS----GTIPPWLA-----E 658 A G +PFW GE R AEL + + LL+ + + WL + Sbjct: 553 EDAHGAPPSVPFWLGEAPERTAELSLRVSNLRELLSSKLTAAEESIANVQQWLGAYCKVD 612 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 N I + + R G VP ++ ER DE G ++++HSP+G R+++ W +A+ Sbjct: 613 VNGARQIIDYLLQGRALLGAVPTQERIIAERFFDESGGMQLVIHSPFGARINKAWGLALR 672 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF-EPEKLLQIVREAVGSSALFA 777 + + A+D+GI + + P A +F + +IV AV S LF Sbjct: 673 KCFCRSFNVELQASATDNGINIALTEQH-SFPLADVFNYLSAVTAKEIVVHAVLQSPLFP 731 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFP 822 R+R A RAL + GH+ P R+RA LL PD P Sbjct: 732 TRWRWAACRALALVRFRNGHKVPPNILRMRAEDLLAAVFPDAVACQDNVNIDDVKLPDHP 791 Query: 823 VILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQS 882 +I E ++ L + ++ L L++++ EIQ V T TPS FA LL F+ Sbjct: 792 LINEAMKNALMEALNVEGLLVLLKKIKNKEIQCIAVDTPTPSVFAHELLNANPYAFL--D 849 Query: 883 DAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLF 942 DAPL ERRA + + L N++ ++ LDP+VI++V Q+ P R E L Sbjct: 850 DAPLEERRARAVEMRRTLPANMVAELGN---LDPEVIKEVR---QQAWPDVRNADE--LQ 901 Query: 943 DLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRD 1002 DLL+ + + A + SS YL+ L+A R A + Q ++ A Sbjct: 902 DLLQTV--LAFPAHAATYHESSRRWQVYLDELVAAGRAGTATLGNQLFWFAVEKA----K 955 Query: 1003 ALGVRLPES-LPEIYLHRVSYPL-RDLFLRYLRAHAL-----VTAEQLAHEFSLGIAIVE 1055 PE+ L + L + PL RD + YL L T L+ LG + +E Sbjct: 956 TFSAIYPEAQLNQSLLDVEAIPLDRDEGIVYLLRGWLFHLGPTTVLALSQFLVLGESEIE 1015 Query: 1056 EQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLL 1109 L +L GL++ N Q+ W + R+ +L R+ PV T + LL Sbjct: 1016 HVLLRLEAMGLILRGVFEGNASQE-WCERRLLARIHRLTLAKLRQEIEPVTPTQFVHWLL 1074 Query: 1110 ERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 Q V P T S G G++ VIEQL G +PA WE I RV++Y Sbjct: 1075 TWQHVAPGTQLS-------------GEQGLLAVIEQLQGFEIPAKAWEPHIFAKRVKNYD 1121 Query: 1170 SEMLDELLATGAVIWSG-QKKLGEDDGL-------------VALHLQEYAAESFTPAEAD 1215 +LD+L G + W L D + L+E ++ + Sbjct: 1122 PMLLDKLCLMGIIGWGRLSSTLTHADTFIDSKRVTPTSIAPITFFLRENSSWLIEVKDGV 1181 Query: 1216 Q----ANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVI 1271 + A S + + + L GA F I +R E ++ LW LV G+ Sbjct: 1182 KEDILAGLSHIAKDVYLYLLKNGASFFMDIVDGVRHLKSE------VEMGLWELVAVGLT 1235 Query: 1272 TSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQ-- 1329 ++D++ LR+L RR R + +GRW LL+ Sbjct: 1236 SADLFDNLRSLIDPRRRLMKKRRRVVRHQYS-------------------SGRWFLLKKS 1276 Query: 1330 VEPLNDTERMLALAENMLDRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGRF 1388 + N +E++ AL +L RYG++ R ++ E NIP + + R++E+ G I GRF Sbjct: 1277 LHSFN-SEQIEALCWVLLKRYGVVFRDLLVREKNIP-RWRELHAAFRTLEERGEIRGGRF 1334 Query: 1389 VEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 VEG G QFA ++ LR + + ++++A DP NV G +LP P Sbjct: 1335 VEGFLGEQFALPYAVESLRAMKHKEIGDEQ---ISIAAVDPLNVSGFILPGP 1383 >UniRef50_Q2SEQ3 Lhr-like helicase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEQ3_HAHCH Length = 1472 Score = 614 bits (1584), Expect = e-174, Method: Compositional matrix adjust. Identities = 478/1456 (32%), Positives = 723/1456 (49%), Gaps = 133/1456 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF PT +Q + W A EH L+ APTGSGKTL AFL+AL+R Sbjct: 7 LFHPLIAEWFAANLGAPTDIQSKAWPRIASGEHCLITAPTGSGKTLTAFLWALNRF---- 62 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 T E +T RILYISP+KAL D++ NL PL + R+GE +R R+G Sbjct: 63 --ATGELQPGRT-RILYISPLKALNNDIRNNLSRPLAELTACFERKGEPFPLIRAQTRSG 119 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL-RGVETVIIDEVHAVAGSKRGAH 192 DTP+ ER ++ R PP+ILITTPESL L+L+S++ +L + ++TVIIDE H++ G KRGA+ Sbjct: 120 DTPSGERRQMLRQPPEILITTPESLNLLLSSQSGLSLLQDLDTVIIDEAHSLLGVKRGAY 179 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----------------DRPVTV 235 L ++ERL L QRI LSAT+ S A F+ G RPVT+ Sbjct: 180 LISAVERL-VDLSGEFQRIALSATINPVSAAADFVAGYELDVRQPDYARNPQYRKRPVTL 238 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 V A +H ++ + P A +H + +W + +L + +R+T Sbjct: 239 VESHAAKHYRLSVNYPAAI--------------AHRSADKHLWDALAETLLTRIQANRAT 284 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 ++FTN+R L EKLT ++N Q++D +A +H Sbjct: 285 LIFTNNRALCEKLTYKIN-------------------------------QAADAMVAYAH 313 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGS+S+E R E+ LK GEL +VATSSLE+GID+GA+D V+ V T SVA+ +QR+GR Sbjct: 314 HGSLSREIRTEVERRLKGGELAAIVATSSLEMGIDIGALDEVVLVQTAGSVAAAIQRVGR 373 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 AGH VG VS G FP +D ++SAV+ + + LE + P PLDVLAQ ++ + Sbjct: 374 AGHNVGDVSVGSLFPTHPQDFLESAVLAKAIMEKDLEPVRPLQCPLDVLAQVIISMTGVA 433 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 +DE Y+ +R ++ + +L RR FD +DML+GRY + ++ +R +TAR Sbjct: 434 TWDLDELYAHLRMSSVYHNLSRRQFDLLIDMLAGRYAESRIRELQARVSVDRIDNAITAR 493 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 PGA L SGG IPDRG + + + S R+GELDEE V+E+++ TLGA W Sbjct: 494 PGALLSLYQSGGVIPDRGYFHL-----RHQDSSARIGELDEEFVWEAKIGQSFTLGAQFW 548 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL-HLLA--DGAFFSGTI 652 +IQ+IT + V V PA ++ PFW+ E R E IG FL HL A D T+ Sbjct: 549 QIQKITHNDVFVLPAKAGASTPPFWKAESISRNFHFSEQIGLFLEHLDANLDAPDIVATL 608 Query: 653 PPWLAEENTIAN-IQGLIEEQRNATG-IVPGSRHLVLERCRDEIGDW---RIILHSPYGR 707 +A+ + + QR TG +P HL++E +G +++LH+ +G Sbjct: 609 QSQYYMTAEVADSLLDFLRRQRAHTGRPLPHRHHLLVEIVDSILGHSHGRQMVLHTGWGA 668 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIV 766 V+ PW +A+ + V S++ IV ++P+ ++P DA + L PE++ ++ Sbjct: 669 EVNRPWGMALEAAWLESFSEQPVVYVSNECIVLQMPE---EIPVDAILSLVSPERIEALL 725 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILE 826 R + S F ARFRECA RALL+ R PLW RL++ +LL Y DFP++LE Sbjct: 726 RARLEGSGFFGARFRECAGRALLLSKGKFNERRPLWMSRLQSQKLLNSVLKYEDFPILLE 785 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 T R CLQD +DL AL++L+ L +IQ S T TPSP A ++ + V +MY+ D P Sbjct: 786 TWRTCLQDEFDLTALKQLLEELQTEQIQWSVANTRTPSPMAQNIAWEQVNLYMYKDDTPT 845 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 +++ + +L +LLR LL + ++ ++ ++ ++ QRLAPG L D ++ Sbjct: 846 SDKTS---NLSEDLLRELLYNDELRPTVNAELCQRFVQKRQRLAPGYAPDSARDLLDWIK 902 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGV 1006 E G + D R E S E L + I ER AR A Sbjct: 903 ERG--AIPDSEWRELLFCIESESGNETLQDMLSATETKIIRLERRNAQVIVARENQASFA 960 Query: 1007 RLPESLPEIYLHRVSYPLRDLFL-RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQG 1065 + PE S L D L +LR + V+A +++ + ++ L L E Sbjct: 961 Q--AFYPEADADAESDALFDTLLGEWLRFYGPVSATEISLWLGVDPQRLQRALDDLVEAR 1018 Query: 1066 LVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALF 1125 ++ + + R + + R AA +A L LE+ + + Sbjct: 1019 AIV--AGPLIEGNAELRYCDRENFEILLHMARKEAAPEFAPLPLEQLPLFLHCWQTLTCE 1076 Query: 1126 ASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS 1185 P + + ++++L G PA+LWE++ILPAR+ DY+ +LD L + W Sbjct: 1077 RDDDPH-----ERLFDIVQRLQGTPAPAALWENEILPARLPDYNPALLDHLFQESDLEWL 1131 Query: 1186 GQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRI 1245 G ++ G+ A L A + EA + R A+ D + + Q + Sbjct: 1132 GVEE-GKTLFCFAADLDLLDAPAPLNEEAAEDLR--------ALFPDVDSRYD---FQAL 1179 Query: 1246 RDKIGESVDLSALQEALWALVWQGVITSDIWAPLR-----ALTRSSSNARTSTRRSHRAR 1300 K G +D + L E LW VW+ I +D +A LR T + ++S R R R Sbjct: 1180 SGKSG--LDNTTLTERLWDWVWKQRINNDAFAALRRGVENKFTIPNLPTQSSGRPPSRRR 1237 Query: 1301 RGRPVYAQPVSPRVSYNTPNL--AGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAV 1358 R +AQ + + N+P RW L Q +P+ + ER A +L RYG++ R+ + Sbjct: 1238 AMRHSFAQ---SKQAANSPGTWRQVRWPLRQDDPITEQERGKDRARLLLSRYGVVFRELL 1294 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 E + ++ R ME S I+ G F + + G QF +T + L+ L QTR Sbjct: 1295 QRELPEMRWSAVFRSLRLMELSREIIGGYFFKDIPGPQF---ITPNALQMLQNGLPQTRL 1351 Query: 1419 YTPVALSANDPANVWG 1434 Y L+A DPA++ G Sbjct: 1352 YW---LNATDPASLCG 1364 >UniRef50_B5E8L0 DEAD/H associated domain protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5E8L0_GEOBB Length = 1495 Score = 614 bits (1584), Expect = e-174, Method: Compositional matrix adjust. Identities = 503/1601 (31%), Positives = 748/1601 (46%), Gaps = 199/1601 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P DWF +PT VQ + W + H LV APTGSGKTLAAFL+A+++L Sbjct: 9 FHPLIADWFRETLGEPTLVQSRAWSEVMQERHVLVTAPTGSGKTLAAFLWAINQL----- 63 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 A +R+LY+SP+KAL DV+RNL PL + + ++ V R+GD Sbjct: 64 --VTGAWPCGETRVLYVSPLKALNNDVRRNLTAPLFELRQHFAKHRVPFPDIGVMTRSGD 121 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER ++ R+PP+ILITTPESL ++LTS+ +R TL GV TVI+DE+HAVAG KRG HL Sbjct: 122 TPGDERRRMLRHPPEILITTPESLNILLTSKGSRATLNGVATVILDEIHAVAGGKRGTHL 181 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ++ERL LL QRI LSATVR VA F+GG R V + P + + Sbjct: 182 ITAVERL-VLLSGEFQRIALSATVRPLETVADFVGGLRQVGREHVPR--------PISIV 232 Query: 254 NMDDVSSVASGTGEDSHAGRE---GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 D S + AG + +WP + + + RHRST+ F NSR EK+T Sbjct: 233 RGDRGKSFSLTISAPDEAGEKRAADELWPALTARFAEIIERHRSTLFFANSRRTTEKVTR 292 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 +NEL L A SHHGS+S+E R E+ Sbjct: 293 LINELSGEEL-------------------------------AYSHHGSLSREIRLAVEER 321 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK GEL+ +VAT+SLELGID+G +D V+ + TP S++S +QRIGR+GH VG VS G+ FP Sbjct: 322 LKRGELKAIVATNSLELGIDIGRLDSVVLIQTPRSISSAIQRIGRSGHGVGEVSSGMLFP 381 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 D V +AVI + G +E + P NPLD+LAQ ++ A + Q+D+ Y ++ Sbjct: 382 TYGMDFVSAAVIARAIADGEIEEVRPVENPLDLLAQIVLSMALAETWQLDDLYDFLKGCY 441 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+++L R+ FD + ML GRY RP+ +R ++ RP +L GGTIP Sbjct: 442 PYRNLSRQQFDLVIGMLEGRYADSHVPELRPRATVDRLEQTISTRPALSMLIYLEGGTIP 501 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 +RG + + L E K +GELDEE V+E R+ D LGA W+I ++T V+V PA Sbjct: 502 ERGYFELRLKESGAK-----IGELDEEFVWERRIGDTFALGAQVWQITEVTHSTVLVVPA 556 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIANIQ 666 +PFWR E R E I FL L + + + + ++ Sbjct: 557 RKSQQIIPFWRAEELDRDFFYSEKIASFLQHCDERLGEPELIEELMQRHFMDRDAARALE 616 Query: 667 GLIEEQRNATGI-VPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHEPWAVAIAGRIH 722 ++ Q+ +T +P HL++E+ RD +IILH+ +G V+ P+ A+ Sbjct: 617 SYLKLQKESTNAPLPHRHHLLIEQFRDPAAGAETEQIILHTLWGNAVNRPFTFALTAAWE 676 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 +G ++DGI +P D + P+ + L PE + ++RE++ + F ARFRE Sbjct: 677 KRYGYPLQAFYNNDGIALLLPH-DLEQPEHLLELVTPENIEPLLRESMEGTGYFGARFRE 735 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 A RALL+ R PLW RLR+ +LL Y DFPV+LET R CL+D +DL L+ Sbjct: 736 NAGRALLLSRSNFKRRMPLWLNRLRSKKLLASVLRYRDFPVLLETWRSCLKDEFDLVNLK 795 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 RL+ + G I ++ V TT SPFA L++ +++Y+ D RR+ +L S+L + Sbjct: 796 RLLEEIQDGSIYLTRVRTTKASPFAQGLIWQQTNKYVYEDDTLGGGRRS---ALGSDLPK 852 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE--LGPMT----VEDL 956 + L +++R E++ QRLA G L D +E L P + + + Sbjct: 853 EMALSAHLRPRLPAELVRLFEQKRQRLAAGYAPDSPRELIDWAKERLLIPFSEWPLLLEA 912 Query: 957 AQRHTGSSEE----------VASYLEN----LLAVKRIFPAM---------------ISG 987 +R +G +EE VA L L+A + P + ++G Sbjct: 913 VRRDSGLAEEELLPQIAGRLVALTLPKTEAPLVAAVEMIPELARAFALEKEELPWSPLAG 972 Query: 988 QERLACM--DDAARL--RDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQL 1043 ER+ + + RL R++L E R R+L + + +L Sbjct: 973 DERMTALLQESLDRLWERNSLATDEGAEEEEPAAARS-------VARWLSYYGPIEVTRL 1025 Query: 1044 AHEFSLGIAIVEEQLQQLREQGLVMNLQ-----QDIWVSDEVFRRLRLRSLQAAREATRP 1098 L ++ + LQ L E G ++ Q + + D V LR L+ +R+ Sbjct: 1026 QLTLGLSDQLLRDTLQTLEETGAMLIDQFTEAATEPQICDAVNLEALLRMLRRSRKP--- 1082 Query: 1099 VAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWES 1158 + L L R + AT A +PG D + +EQL G L A LWE Sbjct: 1083 ----AFEALDLSRLPLFLATVQGLA-----APG--SSADDLRDRLEQLLGAPLSAPLWEE 1131 Query: 1159 QILPARVRDYSSEMLDELLATGAVIW--SGQKKLG----EDDGLVALHLQEYAAESFTPA 1212 ++LPAR+ Y LD L+ + ++W G K+L ED L + +E A P Sbjct: 1132 EVLPARLAPYFGAWLDSLMQSSDLLWFGCGPKRLSFAFPEDLDLFQIQERENA-----PL 1186 Query: 1213 EADQANRSAL------QQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALV 1266 E S L ++ A+ G + + + + LW Sbjct: 1187 EPGAKPPSPLIPDPRGHYSLTAICLMSG------------------LSPATVTKQLWQEA 1228 Query: 1267 WQGVITSDIWAPLRA--LTRSS--SNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLA 1322 W G + +D +A +R L R +A + +R R R Q P Y P Sbjct: 1229 WSGELGNDSFAAVRMGILNRFELPQHAASHSRHLRRPSGNRWSRVQE-GPGNWYLLPAQE 1287 Query: 1323 GRWSLLQVEPLN-DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSG 1381 G L++E N D R+L L+RYGI+ R+ + E P + + R ME SG Sbjct: 1288 GATDALEIEERNKDRVRVL------LERYGILFRELLARELPPLQWSRLFRTLRIMEMSG 1341 Query: 1382 RIMRGRFVEGLGGAQFAERLTIDRL-RDLATQATQTRHYTPVALSANDPANVWG---NLL 1437 ++ G F G+ G QF +L R + T A L+A DPA++ G + L Sbjct: 1342 EVLSGSFFTGIPGLQFISPEAYRQLERGMPTDAV-------YWLNAADPASLCGIGLDGL 1394 Query: 1438 PWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 P+ +P R +V G +L+L + GK++ + E ++ PE T L Sbjct: 1395 PY------RLPARLPSTHLVYRGAELVLVSRRYGKELEIKVEPDDERLPEYLRFFHTLLS 1448 Query: 1498 RE--PRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 R+ P R + +N P +P L GF + GL+ Sbjct: 1449 RDFNPLKRIQVERINGEPAASSPYAGALLSFGFQQAYSGLE 1489 >UniRef50_C1RMK0 Lhr-like helicase n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMK0_9CELL Length = 924 Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust. Identities = 364/716 (50%), Positives = 447/716 (62%), Gaps = 73/716 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D FS TR WF AF PTA Q W + +HALV+APTGSGKTLAAFL+ALD L Sbjct: 4 DRFSDPTRAWFTGAFAAPTAAQTGAWEAVSGGDHALVVAPTGSGKTLAAFLWALDGLLT- 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 GE + +R R++Y+SP+KAL TDV+RNL+ PL G+ R G + VGIRT Sbjct: 63 -GEAPADPTQR--CRVVYVSPLKALATDVERNLRSPLVGVRQAATRLGRALPEVTVGIRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP ER +PPD+LITTPESLYL+LTS AR L GV TVI+DE+HAVA +KRGAH Sbjct: 120 GDTPPAERRAFATSPPDVLITTPESLYLVLTSAARRGLAGVRTVIVDEIHAVAATKRGAH 179 Query: 193 LALSLERLDALLHTS-----AQRIGLSATVRSASDVAAFLGGDRP-------VTVVNPPA 240 LALSLERLDALL AQR+GLSATVR VA+FLGG RP V VV PP+ Sbjct: 180 LALSLERLDALLEAEGGPGPAQRVGLSATVRPVDAVASFLGGARPPAEGGRQVVVVQPPS 239 Query: 241 MRHPQIRIVVPVANMDDVSSVA----SGT--GEDSHAGREG------------------- 275 + +++VVPV ++ D+++ A SGT G G G Sbjct: 240 QKVIDVQVVVPVPDLGDLAAAARPGASGTTPGTVDRYGGPGIDPDLAGFGAPAPGAAPLE 299 Query: 276 --------SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS-PSI 326 SIWP++E ++D V HRST+VFTNSR AE+LTAR+NE++A R P Sbjct: 300 PVPSPPRTSIWPHVEERVVDLVAEHRSTLVFTNSRRGAERLTARINEVWAERRGGDVPDP 359 Query: 327 AVDAAHFESTSGATSNRVQSSD--VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 TS V + D +AR+HHGS+S+ +R TE LK+G L VVATSS Sbjct: 360 GAAQPAAAPGQSGTSAGVDTRDASTIVARAHHGSMSRAERTRTESELKAGRLPAVVATSS 419 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 LELGIDMGA+DLV+QV P SVASGLQR+GRAGHQVG VS+G+ FP R +LV +AV + Sbjct: 420 LELGIDMGALDLVVQVGAPPSVASGLQRVGRAGHQVGAVSRGVVFPTYRGELVAAAVTAQ 479 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 M G LE L P PLDVLAQQ VA AA+D VD+ VRRAAP+ L A L Sbjct: 480 RMRTGELEALAVPTTPLDVLAQQLVAMAAVDDWPVDDLARVVRRAAPFATLGDATLHAVL 539 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL----- 559 DML+GRYPS DF+ RP++VW+R +++ RPGA LAVTSGGTIPDRG++ V L Sbjct: 540 DMLAGRYPSEDFAELRPRVVWDRVADVVSGRPGALRLAVTSGGTIPDRGLFGVFLAGDAG 599 Query: 560 ----PEGEEKAGSR-----RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 P E+ G R RVGELDEEMVYESRV D TLG+++WRI+ IT D+V+VTPA Sbjct: 600 TSDVPADAERTGGRVRGGKRVGELDEEMVYESRVGDTFTLGSSTWRIEDITPDRVLVTPA 659 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----DGA---FFSGTIPPWLAEE 659 PG RLPFW+G+ GRPAELG +G ++ LA DGA + PW A+ Sbjct: 660 PGVPGRLPFWKGDAPGRPAELGRALGAWVRELAALPDDGARERAEQAGLDPWAADN 715 >UniRef50_B5JLM6 DEAD/H associated family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLM6_9BACT Length = 1415 Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust. Identities = 468/1527 (30%), Positives = 731/1527 (47%), Gaps = 213/1527 (13%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF F +PT +Q + W + A EH L+ A TGSGKTLA+FL+A+ +L A Sbjct: 4 WFEERFGRPTEIQEEAWKLIATGEHCLISAATGSGKTLASFLWAISQL-------ASGAW 56 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 + +R+LY+SP+KAL D++RNL PL + R G ++RV R+GDT +R Sbjct: 57 ELGQTRVLYVSPLKALNNDIRRNLLGPLAELEALFREEGVAWPDIRVMTRSGDTEQSDRR 116 Query: 142 KLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 K+ R+PP+ILITTPESL L+LTS+ + L G+ +VIIDEVH++ GSKRG +L +E L Sbjct: 117 KMLRHPPEILITTPESLNLLLTSKDGQRALLGIRSVIIDEVHSIVGSKRGVYLMTGVEHL 176 Query: 201 DALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRIVVPVANM 255 A L+ QR+ LSATVR VAA++GG R V++ A + +I + P Sbjct: 177 -ARLNGEFQRVALSATVRPMELVAAYVGGFSNGKPRRVSLAQSSATKRYEIEVRFP---- 231 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL 315 + + G + W I + + ++ ST++F NSR L EKL ++N Sbjct: 232 ----------ADSNEQGDDDDFWHPIVRDLKALIAKNNSTLIFVNSRKLCEKLAYKIN-- 279 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 FE IA SHHGS+SKE R EQ LK+GE Sbjct: 280 -----------------FEEADP------------IAYSHHGSLSKEFRFAVEQRLKNGE 310 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 L+ +VAT+SLE+GID+G++D V+ V P V+S +Q++GRAGHQVG VS+ + FP RD Sbjct: 311 LKAIVATNSLEMGIDVGSLDCVVMVQCPGVVSSAVQKVGRAGHQVGAVSRAVVFPSYSRD 370 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 ++SAV+ + + +E + P PLDVLAQ V+ +DE +S+++ A P+++L Sbjct: 371 FLESAVLSKAIQDRDIEAVRPVEAPLDVLAQVIVSILGTGPWDIDELFSQIKCAYPYREL 430 Query: 496 PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMY 555 R VFD ++M +GRY + ++ +R T R GA + SGG IPDRG + Sbjct: 431 SREVFDLVINMQAGRYAGSRLRELKARIAIDRAENTATLRKGALMAFYFSGGVIPDRGYF 490 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 + R+GELDEE V+E + D+ TLG SW+I QIT + V+V+PA Sbjct: 491 HL-----RHSGNGSRIGELDEEFVWERAIGDVFTLGVQSWKIDQITYNDVLVSPAASGEV 545 Query: 616 RLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIANIQGLIEE 671 PFW+ E R IG+FL L D F + +E + + + Sbjct: 546 APPFWKAETFDRDFHYSNRIGEFLEWANERLNDAGFVGELQERFRMDEVASKALLDFLRQ 605 Query: 672 QRNATGIVPGSRHLVLERCRDEI-----GDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 QR TG RH +L D G +++LH+ +G RV+ P+A+A+ + +G Sbjct: 606 QRLVTGQDLPHRHHILAEIIDAAPGGAPGQ-QLVLHTHWGGRVNRPFALALDAAWNEAFG 664 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 V ++D +V + + + + I L + + +R + S F ARFRE A Sbjct: 665 HRTEVYVNNDCVVV-VLSCEVSIEE-VIGLVSLQNVDTFLRSRLEGSGFFGARFREAAGT 722 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 +LL+ G R PLW R+RA +L E Q Y DFP++LE R CL+D +D+ +L ++ Sbjct: 723 SLLVTRNKAGQRLPLWLSRMRAKKLFESVQRYDDFPLLLEAWRSCLKDEFDMESLRLVLG 782 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYV-AEFMYQSDAPLAERRASVLSLDSELLRNLL 905 L G+I +S + SPFA+S+ + + E+MY +D+P + ++ +L +L+ + Sbjct: 783 ELEQGDIAVSISRGSKASPFASSVAWRQINEEYMYATDSPGSAGKS---NLREDLVSTVA 839 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE 965 +D ++IR EE+ QRLA G P G + Sbjct: 840 FDAANRPRVDVELIRAFEEKRQRLAEG---------------YAP-----------GDAL 873 Query: 966 EVASYLENLLAVKRI----FPAMISGQERLAC------MDDAARLRDALGVRLPESLPEI 1015 E+ +L + + +++ F ++ G+ + +++ A+ +D L P+ PE+ Sbjct: 874 ELKEWLRDRIVIEKSVWERFRELVEGEVSVEASGEWVYLEEEAKRKDLLFCPSPD--PEL 931 Query: 1016 YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQ-----GLVMNL 1070 + +SY + V+ E++ + +++ + L + G ++ Sbjct: 932 LIEFLSY------------YGAVSVERIRNWLGCDASVLTALIDTLEDDRRLVSGTLIEG 979 Query: 1071 QQDIWVSD----EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFA 1126 + V + E+ R+R R RP ++ L LE+ G LF Sbjct: 980 DDSLCVCEAENFEILLRMR-------RARGRP----SFEPLPLEKLG----------LFL 1018 Query: 1127 STSPGVYE---GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVI 1183 + G+ + GVDGV +++L G WE +L ARV DY + +LD +L Sbjct: 1019 AQWQGLAKERVGVDGVREALDRLLGWTERIEDWERSLLAARVSDYGANLLDAVLLEDGSF 1078 Query: 1184 WSGQKK------LGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWF 1237 W G + L ED L+ AE L ++I+ VL GG + Sbjct: 1079 WYGTSEARVGFCLPEDWDLIGDSGNVLLAE--------------LGESIIQVLDTGGKYS 1124 Query: 1238 AQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLR-------ALTRSSSNAR 1290 ++ + + S L+EALW LVWQG +++D +A R L S SN Sbjct: 1125 FLKLIELL------GCRSSDLEEALWQLVWQGRVSNDAFASARRGAAGKFQLCASESNRV 1178 Query: 1291 TSTRRSHRARRGRPVYAQPVS-PRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDR 1349 S+R RR R ++ VS P Y P L ++ V + ER A +LDR Sbjct: 1179 PSSRAIRMGRRARA--SRTVSYPGSWYALPELDVESDVVAVLE-AEKER----ARIVLDR 1231 Query: 1350 YGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL 1409 YG++ R+ ++ E + + R +E SG I+ GRF EG+ G QF + + LR L Sbjct: 1232 YGVVFRELLLREEEGFRWKDVFRAFRLLELSGEIVGGRFFEGIQGLQFVSK---EALRGL 1288 Query: 1410 ATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQ 1469 + Y LSA DPA++ G + ++P R +V G +L+ + Sbjct: 1289 RKPLPEKAIYW---LSATDPASLCGLGVD---ELKGVLPKRVGSNRLVYRGSELVCESQR 1342 Query: 1470 GGKKMLVWQEKEELLAPEVFHALTTAL 1496 GGK + E + P+V L AL Sbjct: 1343 GGKALAFHVEAGDADLPQVISTLADAL 1369 >UniRef50_A4BMP7 Probable ATP-dependent DNA helicase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMP7_9GAMM Length = 1468 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 522/1587 (32%), Positives = 752/1587 (47%), Gaps = 230/1587 (14%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA R WF + F +PTA Q Q W L+ APTGSGKTLAAFL A+D L REG Sbjct: 11 FQPAVRGWFEQRFGRPTAAQAQAWPAIYEGRDTLIAAPTGSGKTLAAFLAAIDALVREG- 69 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 TR + +R+LY+SP+KAL DVQ+NLQ PL GIA++ R G + ++R +RTGD Sbjct: 70 LTTRLPDE---TRVLYVSPLKALSNDVQKNLQEPLAGIAEQLRTAGLPQPDIRAWVRTGD 126 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER+++ R PP IL+TTPESLYLMLT+ + RE L GV +VI+DEVHA+AG+KRGAHL Sbjct: 127 TPQSERARMRREPPHILVTTPESLYLMLTAESGREMLAGVRSVIVDEVHALAGNKRGAHL 186 Query: 194 ALSLERLDAL----LHTSAQRIGLSATVRSASDVAAFLGGDRP--VTVVNPPAMRHPQIR 247 +LSL RLDAL L RIGLSAT + + +AAFL G +V+ R + Sbjct: 187 SLSLARLDALVENRLGKPPTRIGLSATQKPIATMAAFLTGRDAGRCNIVDTGYTRDRDLS 246 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + VP A + V S D+ G I+ + G+++ H++T++F N+R LAE+ Sbjct: 247 LCVPGAPLSAVMS------NDTF----GEIYDQL-AGLIEA---HKTTLIFVNTRRLAER 292 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L E RL D A HHGS+++E R Sbjct: 293 AARHLAE----RL-------------------------GEDAITA--HHGSLAREHRLEA 321 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK+GELR +VAT++LELGID+GAVDLV Q+ +P ++A+ LQR+GR+GH V + KG Sbjct: 322 ERRLKNGELRALVATAALELGIDIGAVDLVCQLGSPRAIATLLQRVGRSGHAVSALPKGR 381 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRV 486 FP +R DL + +++ + G L+ + P PLDVLAQQ VA AA+ + Y R Sbjct: 382 LFPLSRDDLAECTALLDAVRRGELDVIRIPVAPLDVLAQQIVAEVAAVGECEEAALYDRC 441 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 A P++DL R F AT+ ML+ + G +A + N L R A+L A+T Sbjct: 442 ITAWPYRDLTREAFTATVRMLADGVTTRRGRRAAHIHRDAVNAR---LRPRKSARLTALT 498 Query: 545 SGGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 +GG IPD+ Y V+L P G ++G L+E+ +ES V DI LG TS+RI +I Sbjct: 499 NGGVIPDQFDYEVILSPAG------LKIGSLNEDFAFESLVGDIFQLGNTSYRILKIESG 552 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG----DFLHLLADGAFFSGTIPPWLAEE 659 +V V A G+ +PFW GE GR EL + + L +G WL +E Sbjct: 553 RVFVEDAKGQPPNIPFWFGEAPGRTDELSAAVSRLRVELEQRLTEGV---AAACGWLEQE 609 Query: 660 NTI-----ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 I A + R A G +P +V ER DE+GD +I+HSP+G R++ W Sbjct: 610 LRIPVAAAAQLADYYGAARAALGALPTQWCIVFERFFDEVGDMHLIVHSPFGSRLNRAWG 669 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 +A+ R + + A +D IV + T + + + ++ +A + Sbjct: 670 LALRKRFCRKFNFELQAAALEDSIVLSLGATHSFVLEEVAGYLRSATVRDVLTQATLDAP 729 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEI--------------AQGYPD 820 +F R+R A AL + G RTP QR A LL + A+ P+ Sbjct: 730 MFGNRWRWNATIALAVRRNFKGKRTPAQFQRSDAEDLLAVVFPDQLACAENLAGARVIPN 789 Query: 821 FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMY 880 P++ +TL +CLQD D+ LE L++RL GEI++ TPSP A ++ + + Sbjct: 790 HPLVDQTLADCLQDTMDIEGLEALLKRLEAGEIEVIGRDLPTPSPLAEEII--NARNYAF 847 Query: 881 QSDAPLAERR--------------ASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEEL 926 D ERR A LDS + + + P DP+ ++ + L Sbjct: 848 LDDGAQEERRTLAVRSGGYWSAEEAGQAQLDSAAIERVREEAWP----DPRDADELHDAL 903 Query: 927 QRLAPGRRAKGEE------GLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRI 980 RA+GE+ GL D L P E L + + + +A +R Sbjct: 904 VVHGFLTRAEGEQGGRNPAGLADDLSGGWPRLFETLCVDRRAACVTLPGGQQVWVAAER- 962 Query: 981 FPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTA 1040 +I Q A + A ++ L + P L E LR+L L VT Sbjct: 963 ---LIEFQVLFADLKLAPQIEPVLEGQPPADLTEA--------LRELLRSRLEGLGPVTL 1011 Query: 1041 EQLAHEFSLGIAIVEEQLQQLREQGLVMN------LQQDIWVSDEVFRRLRLRSLQAARE 1094 EQL L A L QL +G + W + R+ +LQ R Sbjct: 1012 EQLTAPLGLPEAAAAIALAQLEAEGFAIQGCFGAAATSIQWCERRLLARIHRYTLQRRRR 1071 Query: 1095 ATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPAS 1154 PV+ Y R LL G+L T G G EGV G++RV+ L G LPA+ Sbjct: 1072 EIEPVSPQDYMRFLLGWHGLLEGTAG----------GRAEGVGGLVRVLAMLEGFSLPAA 1121 Query: 1155 LWESQILPARVRDYSSEMLDELLATGAVIW-----------SGQKKLGEDDGLVALHLQE 1203 WES +LPARV DY+ +MLD L +G + W G++++G + L E Sbjct: 1122 AWESDVLPARVADYNPQMLDTLCTSGRIAWLRLNASHATNGDGKRRVGPVRN-TPIALIE 1180 Query: 1204 YAAESF-------TPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDL- 1255 A F P EA + + SA + ++ VL GA F ++ E+ L Sbjct: 1181 RPALRFWQELVLAPPPEALKMSASA--RKLLEVLDTRGASFFHELQ--------ETAGLL 1230 Query: 1256 -SALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRV 1314 + ++ L L G+ ++D +A LRAL S RP +A P + Sbjct: 1231 RTQAEDGLAELAAWGLASADSFAGLRALLNRSGP--------------RPAHA-PRTRIR 1275 Query: 1315 SYNTPNL--AGRWSLLQ-VEPLN------DTERMLALAENMLDRYGIISRQAVIAENIPG 1365 L AGRWS L+ V+ +N D++ + +A +L RYG++ ++ + E+ Sbjct: 1276 RRRFAGLEEAGRWSRLRTVDSVNGAGRLSDSKTLEHIAWTLLSRYGVVFKRILERESSLP 1335 Query: 1366 GFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP--VA 1423 + + + R +E G I GRFV G G QFA + LR T+ + V+ Sbjct: 1336 AWRELLYIYRRLEARGEIRGGRFVAGFAGEQFAAPEAVAALRK-----TRKAEFDGAWVS 1390 Query: 1424 LSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLV------- 1476 LSA DP N+ G + P PA VP R V++ G L + +GG+ V Sbjct: 1391 LSAADPLNLVGIVTPGQRLPA--VPGNR----VLLRDG-LPVAFCEGGEVRFVGEYEPET 1443 Query: 1477 -WQEKEELLAPEVFHALTTALRREPRL 1502 W+ + LL HA R E RL Sbjct: 1444 QWKLRNHLLR----HARPAKYRHEARL 1466 >UniRef50_C5EPU4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C5EPU4_9FIRM Length = 1438 Score = 577 bits (1488), Expect = e-163, Method: Compositional matrix adjust. Identities = 486/1574 (30%), Positives = 726/1574 (46%), Gaps = 211/1574 (13%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T WF +PT VQ TW A + LV APTG+GKTL+AFL +DRL+ Sbjct: 8 LFSQPTAQWFKDTLGRPTKVQEDTWPAIASGQPVLVSAPTGTGKTLSAFLVFIDRLYAMA 67 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR-------------- 119 E T ++ ++Y+SP+K+L D++ NL PL+GI E RR Sbjct: 68 EEGTL----KEELYLIYVSPLKSLAGDIRENLNRPLEGIRQEMERRVGAARQTGYADLAG 123 Query: 120 -----------------GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML 162 G T ++++VGIRTGDTP ++R ++ ++PP ILI TPESLYLML Sbjct: 124 NVHPAGKIHPAGDVHPAGTTSLDIQVGIRTGDTPQKDRQRMVKHPPHILIITPESLYLML 183 Query: 163 TS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 TS ++ LR VIIDE+HA+ +KRGAHL LS+ RLD L QRIGLSAT+ Sbjct: 184 TSMTGQKVLRTARAVIIDELHALIDTKRGAHLMLSIARLDRLCGRPLQRIGLSATIEPLE 243 Query: 222 DVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYI 281 AA+L + V+ PAM QIRI + GT S R+ +W + Sbjct: 244 LAAAYLSPE--PAVICAPAMEK-QIRIEI------------LGT-TPSQGRRKDPVWEEL 287 Query: 282 ETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS 341 + + L RS I F+ R AEKL +N L Sbjct: 288 GQAVYRQCLSCRSVIAFSEGRRYAEKLAYYVNLL-------------------------- 321 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 D F AR HHGS+SKEQRA EQ L+ G LR + ATSS+ELGID+G +DLVIQV Sbjct: 322 ----GGDGF-ARVHHGSLSKEQRAEVEQDLRDGRLRLLCATSSMELGIDVGELDLVIQVG 376 Query: 402 TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 P +V+S +QR+GRAGH G VS +PRT + V + + G +E+ PP L Sbjct: 377 CPRTVSSTMQRLGRAGHGPGRVSVMYMYPRTASESVYCGMTAQVARQGGVEHTKPPRMCL 436 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 DVLAQ V+ A + V++ + + R+ P++D+ A L ML+G Y RP Sbjct: 437 DVLAQHLVSMANGEGYCVEDVMAVLERSYPFRDVTGEDIKAVLSMLAGDYEHRRDIPVRP 496 Query: 522 KLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE 581 +++++R G + +++LA +GGTIPD+G+Y+ +G ++GELDEE VYE Sbjct: 497 RVLYDRIHGRVEGDAYSRMLATAAGGTIPDKGLYTAKTEDG------VKLGELDEEFVYE 550 Query: 582 SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL 641 S++ D LG+ W+I I +D V V+ P ARLPFW+GE GR + G L Sbjct: 551 SQLGDKFMLGSFGWKITGIDKDTVYVSQVPAEGARLPFWKGEIRGRTLKTSREFGKILAG 610 Query: 642 LADGAFFSGTIPPWLA----EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW 697 L + A G + L+ +E + N G +E Q +TG +P ++ +V+E D G Sbjct: 611 L-EAAHEQGRLREELSALGMDEAAVINASGFLERQIQSTGGLPDNKTIVVEHFTDHTGCH 669 Query: 698 RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF 757 +++LH+ GRRV+ P ++ + + + G D V +DG + P G +P+ ++ Sbjct: 670 QVMLHALLGRRVNGPLSLLLQHMVRNICGFDIGCVDEEDGFLL-YPYGSGVMPEGLLYRL 728 Query: 758 EPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQG 817 EP+++ + + + + LF FR AARAL+M G G R PLW QRL+++++L+ Sbjct: 729 EPDQVRETLEAMLPLTPLFGMAFRYNAARALMM-GMKQGGRQPLWMQRLKSTEMLDSLMN 787 Query: 818 YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAE 877 D P+I ET RECL+D +D+ + +++ + G I + +V T PSP + L + A Sbjct: 788 EKDHPLIRETKRECLEDQWDIDGVIQILHEIRAGLIHVREVCTDVPSPMSLPLQWQVEAA 847 Query: 878 FMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKG 937 MY+ R +V + L+ L G E L+ Q R R + Sbjct: 848 EMYEYAPATPGIRQAVY----DELKYLEGIRPAPEALEKQQERT-----------RLPQD 892 Query: 938 EEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKR---IFPAMISGQERLACM 994 E L +L MT DL G + +L +L A R I P + E+ Sbjct: 893 EAQLHSIL-----MTEGDL---EAGELDVPVEWLASLAAQGRALYIEPGLWIAAEQEEEY 944 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 + A + L + +R L RY + H T Q+ + L V Sbjct: 945 EKAFSMDG--------------LEEATAIVRRLL-RYRKGH---TPGQIGERYFLPEEKV 986 Query: 1055 EEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGV 1114 L+ L +G ++ I+ +++ R R +L+ R T YA LL R Sbjct: 987 GVILELLCSRGEIVE-ADGIYYHRKLYDRARQSTLKNLRRETATQPGAHYAALLAGR--A 1043 Query: 1115 LPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLD 1174 P T L + +E G P WE+ +LP RVR+YS MLD Sbjct: 1044 KPYTQADEQL---------------KKTLELYCGRMFPVRFWENVLLPRRVRNYSEGMLD 1088 Query: 1175 ELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGG 1234 LLA G W K+ D L ++ ++ P LQ I L G Sbjct: 1089 RLLAEGDYYW----KMSPDGALCFCRYEDIDWDAPLPDMEGILGGEELQ--IYRELKRRG 1142 Query: 1235 AWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTR 1294 A F + ++ ++K + QE L L +G++ +D + P+R + + R Sbjct: 1143 ACFLKFLADIPKEK--------SAQELLLGLAEKGLVCADSFVPVRQWQNREKVKKATAR 1194 Query: 1295 RSHRAR-----RGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDR 1349 + AR GR +P+ P+ L + Q +P+ E A + Sbjct: 1195 QRVSARVMALSAGRWDIVRPLKPKKMEEWLEL-----IFQEQPVMCRETFRRAAAGLAGS 1249 Query: 1350 -YGIISRQAVIAENIPG----------GFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFA 1398 Y QA A + G + + L R E +G++ RG FVEG+ GAQF Sbjct: 1250 PYLPGFSQAGAARSDAGEAAGAARSDMNYQNAMELLRIWEYTGQVRRGYFVEGMSGAQFI 1309 Query: 1399 ERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATL-VPTRRAGALVV 1457 + + + T A + + L+A DPA +WG +L P L VP G V Sbjct: 1310 RKEEYEGV----TAALKAPEDGIIWLNAADPAQIWGKILVQPGERDFLNVP----GTAVA 1361 Query: 1458 VSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQT 1517 + G++ L + G+ + V++ + +VF R P E+ L VR+ Sbjct: 1362 LHCGRVTAVLERQGRVLRVFESQGLEQTLQVFVNDFKGKRLFP-------ELKRLIVREY 1414 Query: 1518 PMFT--LLREAGFS 1529 P T L+ AGFS Sbjct: 1415 PEGTGETLKRAGFS 1428 >UniRef50_Q13M86 ATP-dependent helicase, DEAD/DEAH family n=5 Tax=Burkholderia RepID=Q13M86_BURXL Length = 1510 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 495/1525 (32%), Positives = 710/1525 (46%), Gaps = 214/1525 (14%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F PA WFL+ F PT Q W R LV APTGSGKTL AFL ALD L ++ Sbjct: 47 DDFHPAVASWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQ 106 Query: 73 G----GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 G G E + ++Y+SP+KAL D++ NLQ+PL+GIA E RG +++R Sbjct: 107 GLAAGGALPDE------TLVVYVSPLKALSNDIRLNLQLPLQGIAAELEARGLPALDIRT 160 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGS 187 +RTGDT QER+ L + P IL+TTPESLY++L S + R L V TVI+DE+HA+AGS Sbjct: 161 AVRTGDTTQQERNALKKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGS 220 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV--------TVVNPP 239 KRG+HLALSLERLDAL RIGLSAT + S VA FL G + +V+ Sbjct: 221 KRGSHLALSLERLDALCQRRLPRIGLSATQKPVSAVARFLVGGASIDSGIPADCAIVDVG 280 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +R + + +P ++ V +W + + + V HR+T++F Sbjct: 281 HVRERDLALEIPPVPLEAVMP--------------NEVWERVYDRLAELVAMHRTTLIFV 326 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R +AE+ L E RL + A HHGS+ Sbjct: 327 NTRRMAERAARHLTE----RLGKEAVAA---------------------------HHGSL 355 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 ++E R EQ LK GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GH Sbjct: 356 AREHRFDAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHH 415 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 VGG+ KG FP +R DL++ A +++C+ G L+ L P PLDVLAQQ VA + Sbjct: 416 VGGMPKGRLFPASRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWSE 475 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPG 537 D + +RRAAP+ DL R +DA L ML Y S G A+ + V +G L R G Sbjct: 476 DALFDMMRRAAPYADLTREQYDAVLRMLVEGYTSRNGPRGAYLHRDVL---SGTLRGRRG 532 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 +L+AVTSGGTIP+ Y+V+L E +A + +G ++E+ ES D+ LG S+RI Sbjct: 533 GKLVAVTSGGTIPENADYAVVL---EPQAIN--IGTVNEDFAVESLAGDVFQLGNASYRI 587 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELG-------EMIGDFLH-----LLADG 645 +I +V V A G+ +PFW GE GR EL E IG L + A Sbjct: 588 LRIESGRVRVEDAQGQPPNIPFWLGEAPGRSDELSFGVARLREQIGRLLDGKDPAMPATV 647 Query: 646 AFFSG---------TIP-------PWLA-----EENTIANIQGLIEEQRNATGIVPGSRH 684 A +G T+P WL +E I + R A ++P Sbjct: 648 ANATGTEVQAEEITTLPVRLDHATQWLTDNLGLDEAAARQIVDYLARARAALSVLPTQNT 707 Query: 685 LVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD 744 LV+ER DE G ++++H+P+G RV+ W +A+ R + + A++D IV + Sbjct: 708 LVMERFFDESGGTQLVIHAPFGSRVNRAWGLALRKRFCRTFNFELQAAATEDAIVLSLTG 767 Query: 745 TDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQ 804 + + D ++ +A+ + LF R+R A AL +P T G +T Q Sbjct: 768 SHSFVLDEVWRYLHSNSAEHLLIQALLDAPLFGVRWRWNATTALGLPRYTGGRKTAPQLQ 827 Query: 805 RLRASQL-----------LEIAQG---YPDFPVILETLRECLQDVYDLPALERLMRRLNG 850 R+R+ L LE G P P++ +T+ +CL + D L+RR+ Sbjct: 828 RMRSEDLLASVFPEQAACLENVVGERELPHHPLVDQTVDDCLHEAMDSERWLALLRRIEQ 887 Query: 851 GEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDP 910 GE+Q+ PSP A +L + Y DAP+ ERR + L R Sbjct: 888 GEVQLVARDLPAPSPLAAEIL--NAKPYAYLDDAPIEERRTQAV-----LNRRWTDPSSA 940 Query: 911 GEL--LDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVA 968 +L LD I V ++ +A+ + + + L L +T + A+ H G +A Sbjct: 941 DDLGALDAGAIESVRDDAW-----PQARNADEMHEALTGLACITDTE-ARHHEGWPAWLA 994 Query: 969 SYLENLLAVKRIFPAMISGQ----ERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPL 1024 S E+ A R+ A +G ERL C + L P + P+ Y S+ Sbjct: 995 SLAESGRAT-RLQIADDAGVWLPIERLTCFES---LYPEARFSPPLAAPKGYTD--SWNA 1048 Query: 1025 RDLFLRYLRAHAL----VTAEQLAHEFSLGIAIVEEQLQQLREQGLVM------NLQQDI 1074 D L LRA + A +A L A VE+ L +L +G VM ++ Sbjct: 1049 DDALLDVLRARLTGFGPLPASAIAAALKLPAASVEQSLMRLEAEGYVMRGRFTPQAAEEE 1108 Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ +++ R PV + R L E Q + P T E Sbjct: 1109 WCERHLLARIHRYTVKRLRREIEPVERHDFMRFLFEWQHLTPDTRS-------------E 1155 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS-------GQ 1187 G D + V+EQL G A WE ILPARV+ Y++ LDEL G ++W+ G Sbjct: 1156 GRDALAAVLEQLEGFQAAAGAWEEDILPARVKAYANTSLDELCRAGKIVWTRLTERARGT 1215 Query: 1188 KKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRD 1247 +V L S + Q SA Q++ VLA GA F ++ +R Sbjct: 1216 AGPVRSTPIVLLPRARVRVWSALLDPSKQPELSARAQSVYDVLAQHGAMFFDELLTEVR- 1274 Query: 1248 KIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYA 1307 V L+ AL LV G++ SD +A LRAL + + R + S RAR + Sbjct: 1275 -----VLRMELESALGELVAAGLVNSDSFAGLRALLKPVAK-RNAFSGSRRARSSALIGG 1328 Query: 1308 QPVSPRVSYNTPNLAGRWSLLQ------VEPLNDTERMLA------LAENMLDRYGIISR 1355 + AGRW+L+ E + R L +A +L RYG++ Sbjct: 1329 M-----------DDAGRWALVSRPATAAAEVAPERRRQLPPDVLEHVAMTLLRRYGVVFW 1377 Query: 1356 QAVIAENIPGGFPSMQTLCR---SMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQ 1412 + + E P + L R +E G I GRFV GL G QFA I LR++ Sbjct: 1378 R--LLEREADWLPPWRDLLRVFQRLEARGVIRGGRFVNGLAGEQFALPEAIPVLREVRRH 1435 Query: 1413 ATQTRHYTPVALSANDPANVWGNLL 1437 A V ++ DP N+ G LL Sbjct: 1436 ANDGAF---VCVAGTDPLNLAGTLL 1457 >UniRef50_A3ZQS6 DEAD/DEAH box helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQS6_9PLAN Length = 1467 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 484/1598 (30%), Positives = 724/1598 (45%), Gaps = 254/1598 (15%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 ++ D F P R+WF F +PT Q Q W A + L+ APTGSGKTLAAF+ LDRL Sbjct: 1 MILDQFHPIVREWFQTKFGEPTDAQAQGWPSIAGRRNTLIAAPTGSGKTLAAFMVCLDRL 60 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 FR + R + ++Y+SP+KAL D+QRNL PL+ I + RRG +R Sbjct: 61 FRRWMAGS----LRDATYVVYVSPLKALSNDIQRNLDTPLEEICNLAERRGILPPQIRTA 116 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSK 188 +RTGDTP+ ER K+ R PP IL+TTPESLYL+LT+ +AR+TL+ V+TVI+DE+HA+A K Sbjct: 117 VRTGDTPSSERQKMVRRPPHILVTTPESLYLILTAPKARQTLQHVDTVIVDEIHALARDK 176 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--------DRPVTVVNPPA 240 RG+HL L+LERL+A+ H RIGLSAT + ++AAFL G +V+ Sbjct: 177 RGSHLTLTLERLNAVCHERPVRIGLSATQKPIEEIAAFLVGAPHAEESEATRCEIVDAGH 236 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 R +++VVP ++ V S W + +++ + HRST+VF N Sbjct: 237 RRDLDLQVVVPPTPLEAVCS--------------NEQWAEVYEQLIELIQSHRSTLVFVN 282 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R +AE++ RL E + SHHGS+S Sbjct: 283 TRRMAERVAHRLTEALGEE-------------------------------VITSHHGSLS 311 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 K+ R EQ LK+G+L+ +VAT+SLE+GID+G +DLV+Q+ + S+A+ LQR+GR+GH + Sbjct: 312 KDIRHSAEQRLKAGQLKAIVATASLEMGIDIGYIDLVVQIGSSRSIANFLQRVGRSGHSL 371 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 KG P TR +L++ ++ + G L+ + P PLD+LAQQ VA A + Sbjct: 372 RATPKGRLMPLTRDELIECCALMRAIGKGVLDKIEIPEKPLDILAQQIVAEVAAEDRDET 431 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE--TGILTARPGA 538 E + RRA P+++L R+ +D+ L++L+ G + + +R+ G+L AR GA Sbjct: 432 ELFHLFRRAYPYRNLQRKEYDSVLEILN----RGLTRSIKNGAYLHRDPINGMLKARRGA 487 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ 598 ++ A TSGG IPD Y V+ EGE+ VG +DE+ ES D+ LG TSWRI Sbjct: 488 RIAACTSGGAIPDTAQYRVVT-EGEKVF----VGSVDEDFAIESLAGDVFLLGNTSWRIA 542 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--------------- 643 + +V+V A G+ +PFW GE GR EL I +A Sbjct: 543 YVRNGEVVVNDAQGQPPSIPFWFGESPGRTVELSSEISLLREEMAQRIIAADRDRSREKI 602 Query: 644 ----------DGAF--FSGTIPPWLAEE---NTIANIQGL--IEEQRNATGIVPGSRHLV 686 + +F W+ E + A +Q + + Q++A G+VP R +V Sbjct: 603 QLPALSVGVLENSFDQLDAETVAWVESECLASRFAAMQAVRYVAAQQSAIGMVPTQRQIV 662 Query: 687 LERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARI-PDT 745 ER DE G ++++HSP G R++ W +A R + + A DDGIV + P Sbjct: 663 FERFFDESGAMQLVVHSPLGTRINRAWGLAFRKRFCRSFDFELQASADDDGIVLSLGPQH 722 Query: 746 DGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQR 805 L D + E +++ +A+ + +F R+R RAL + + G + P R Sbjct: 723 SFPLED-MFRMLTIESGPKLLEQALLAVPMFGVRWRWNVTRALALLRFSGGKKVPPHMLR 781 Query: 806 LRASQLLEIA----------QG----YPDFPVILETLRECLQDVYDLPALERLMRRLNGG 851 RA +L A G YPD P++ +TL +C+ + DL ++++ + G Sbjct: 782 FRADDMLAAAFPDQVGCLENHGADIEYPDHPIVQQTLHDCMTEAMDLDRWKQMLIDVQEG 841 Query: 852 EIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPG 911 ++ T PSPFA + F+ APL ERR ++ L + + ++ G Sbjct: 842 RVEFVPRDTREPSPFAHERINANPYAFL--DPAPLEERRTRAVATRRTLSTSEMKEL--G 897 Query: 912 ELLDPQ----------VIRQVEEELQRLA-----PGRRAKGEEGLFDLLRELGPMTVEDL 956 +L V+R +E LA P A F L E G Sbjct: 898 KLSYEAISTVRQEAWPVVRDADELHDVLASMIVLPQTLASDWSPHFTRLAEQG------R 951 Query: 957 AQRHT-GSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP-E 1014 A R+T E + LENL + ++PA +S + +P SL E Sbjct: 952 AVRYTRPGGEPLWVALENLPIAQAVWPAGVSQP----------------AIEVPASLQRE 995 Query: 1015 IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM------ 1068 I H + + YL +AE+L+ + L + V + L +G V+ Sbjct: 996 IESHTARVEVIRGQVPYL---GPFSAEELSSQLDLPASSVFAACEALEAEGTVLRGQFYD 1052 Query: 1069 NLQQ----DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPAL 1124 N QQ W + R+ ++ RE RP + TY R L+ +L S Sbjct: 1053 NPQQTQETTQWCDRRLLARIHRLTISGLREQIRPASPETYLRFLVRHHDLLRKIKNS--- 1109 Query: 1125 FASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW 1184 G + + +EQL G A WE +L R+ DY + LDELLA+G W Sbjct: 1110 ----------GPRALRKSLEQLQGFQSAAGSWERSLLSGRMDDYDGQCLDELLASGEATW 1159 Query: 1185 -----------------SGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIV 1227 S +K L L A +L PAEA + ++ Sbjct: 1160 GRLRPPLPNGEEQKSMASLRKSLPMTIALRA-NLGWLLPTDHAPAEALARGNAT---DVL 1215 Query: 1228 AVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSS 1287 L GA F Q + RI K+ + L+EAL L G+IT D +R + Sbjct: 1216 DSLKQRGALFDQDL--RILTKLLP----THLEEALRELAALGLITCDSLVGVREMVDDVL 1269 Query: 1288 NARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQ--VEPLNDTERMLALAEN 1345 R + RR P GRWSL VE L+ E Sbjct: 1270 KKRKAKRR---------------------GAPTRTGRWSLFPGIVETLSSDEHAQNWCWL 1308 Query: 1346 MLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDR 1405 +L RYG++ R + E+ + + R ME G I GRF+ + G Q+A TI Sbjct: 1309 LLSRYGVVFRDVLTRESTAPPWWRLVACFRRMERRGEIRGGRFIADVAGEQYATEATIYA 1368 Query: 1406 LRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLL 1465 LR L + +A+SA DP N++G + PA +G +V+ G+++ Sbjct: 1369 LRKLRNDESVDDW---IAISAADPVNLFGVVTAGGRIPAI------SGNSLVIRNGQIVA 1419 Query: 1466 YLAQGGKKMLVWQEKEELLAPEVFHALTTAL---RREP 1500 G + +APE H +T AL RR P Sbjct: 1420 SKRSGKIDFHI------DVAPEEVHEMTRALHAGRRVP 1451 >UniRef50_C1F8X5 Helicase, DEAD/DEAH domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8X5_ACIC5 Length = 1468 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 484/1526 (31%), Positives = 715/1526 (46%), Gaps = 224/1526 (14%) Query: 17 PATRDWFLRAFKQPTAVQPQTW-HVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 P ++WF F PT Q Q W H+ A + L+ APTGSGKTLAAFL +DRL R+ Sbjct: 15 PVVQEWFTSRFGTPTEPQQQGWPHILAETP-TLISAPTGSGKTLAAFLICIDRLLRKA-- 71 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 E + ++Y+SP+KAL DVQ+NL+ PL I RG +R +RTGDT Sbjct: 72 --IEGRLGFGTEVVYVSPLKALSNDVQKNLEAPLHEIQQLALARGYLCPPIRAAVRTGDT 129 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLA 194 ER ++PP IL+TTPESLY++LTS ++RE LR V TVI+DE+HA+A KRGAHL Sbjct: 130 SPAERRARLKHPPHILVTTPESLYILLTSEKSREHLRRVHTVIVDEIHAMADDKRGAHLT 189 Query: 195 LSLERLDALL--------------HTSAQRIGLSATVRSASDVAAFLGGDR--PVTVVNP 238 L+LERLDAL+ H + RIGLSAT VA FLGG R V +V Sbjct: 190 LTLERLDALVTAENTLTPAASLLTHPAPLRIGLSATQNPIELVAEFLGGARGNEVKIVQC 249 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 R + I VP + V++ A +W + I + V HRST+VF Sbjct: 250 GQRRDLDVAIEVPTVPLGAVATNA--------------LWESVYDRIAELVREHRSTLVF 295 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 N+R + E++ +L E R+ + +V +HHGS Sbjct: 296 VNTRRMVERIAFQLGE----------------------------RLGAENV---AAHHGS 324 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH 418 +S++ R E+ LK+G++R +VAT+SLELGID+GAVDLV Q+ + ++A +QR+GRAGH Sbjct: 325 LSRKLRLEAERRLKAGDIRVLVATASLELGIDIGAVDLVCQINSTRAIAVAMQRVGRAGH 384 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQ 478 G KG FF TR DLV+SA ++ M +G L+ L P P DVL QQ VAA A + Sbjct: 385 WRGATPKGRFFVTTRDDLVESAALLRAMRSGVLDRLEIPPRPFDVLMQQIVAACAAEPWD 444 Query: 479 VDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARP 536 Y+ +RRA P++DLP + FD L +L+ S G + A+ L+ +R + AR Sbjct: 445 ERALYNILRRAHPYRDLPWQEFDQALCLLTEGIESSRGRYGAY---LLRDRIHSRVQARR 501 Query: 537 GAQLLAVTSGGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 GA++ AVT+GGTIPD ++ V+ PEG + + LDE +S D+I LG TSW Sbjct: 502 GARITAVTNGGTIPDTALFPVIAQPEGVQ------IATLDEHFAVDSSPGDVIQLGNTSW 555 Query: 596 RIQQI-TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL------ADGAFF 648 RIQ++ + +V+V A G+ LPFW GE R AEL E + + A + Sbjct: 556 RIQRVESAGRVLVEDAQGQPPTLPFWTGEAPQRTAELSEFVSSLRTEIDCRTRGAQPGYL 615 Query: 649 SGTIP------PWLAEENTIA-----NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW 697 S +P WL +E + + I E R G VP +V ER DE G Sbjct: 616 SLAVPEIAEAAAWLQQECCVCESGAKQLLQYIIEGRAGLGAVPSVTTIVAERFFDEGGGM 675 Query: 698 RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF 757 ++ILH+P+G R+++ W +A+ R + + A+D+GI + + P + +F F Sbjct: 676 QLILHAPFGGRINKAWGLALRKRFCRGFNFELQAAATDNGINISLAEQH-SFPLSDVFQF 734 Query: 758 -EPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL---- 812 + +++ +A +S +F R++ A R+L + G + QR R LL Sbjct: 735 LTTHTVRELLEQASLASPIFKNRWKWAAGRSLQLLRFQKGKKVAPQVQRTRGEDLLASVF 794 Query: 813 -------EIAQG---YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTT 862 E +G PD P++ E +++ L++ DL L ++ ++ G IQ V TTT Sbjct: 795 PQAAACFENIEGDIQIPDHPLVAEVMKDVLREAMDLEGLTAVLEGIHSGRIQCLAVDTTT 854 Query: 863 PSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQV 922 PS FA LL + + + +A L ERRA + L G++ P + Sbjct: 855 PSAFAHELL--HANPYAFLDEAGLEERRARAIQLRGAPPAG-AGRISP---------ESI 902 Query: 923 EEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFP 982 +E L P R + E L DLL L + LA H + + +L + R Sbjct: 903 DEIRATLWPDIRDEHE--LHDLLCSL-VLVPASLA--HDARTAHWGLWFAHLESTHRAVI 957 Query: 983 AMISGQ------ERLACMD---DAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLR 1033 A + ER+A ++ A ++ LP + P + + LR +++ Sbjct: 958 ATCNSHSYFCAAERIAWLERLWPQATFTQSVPA-LPHAAPPEHPEEI---LRKAIQGWMQ 1013 Query: 1034 AHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN--LQQ-------DI-WVSDEVFRR 1083 TA L + V +Q L G ++ +Q DI W + +R Sbjct: 1014 ILGPATARTLGERLGIAPHEVWKQFLVLETTGTMLRGVFEQLAPEDDLDIEWCERRILQR 1073 Query: 1084 LRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVI 1143 + ++ R+ PV TY R LL+ Q + P G DG++ + Sbjct: 1074 IHKATIGRLRKQVEPVPPATYLRFLLDWQHIAPQRQ-------------LTGEDGLLEAL 1120 Query: 1144 EQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW-------------SG--QK 1188 L G PA WE +LP RV +Y LD L TG V W SG ++ Sbjct: 1121 RGLQGYEAPAIEWERHLLPQRVANYDPRWLDALCLTGVVGWGRISPHPAFQSPDSGGPRR 1180 Query: 1189 KLGEDDGLVALHLQEYA-------AESFTPAEADQANRSALQQAIVAVLADGGAWFAQQI 1241 + + L+E A A P A S L + + LA+ GA F+ + Sbjct: 1181 VVPTSMAPITFFLREEAHWMDRCLAARQIPEAHLAACLSELANRVRSCLAERGAMFSADL 1240 Query: 1242 SQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARR 1301 ++ + GE + ALW LV G++T+D + LR + +A++ST+ Sbjct: 1241 ARLLAAPPGE------ISHALWELVAAGLVTADGFDALRQILH--PHAKSSTK------- 1285 Query: 1302 GRPVYAQPVSPRVSYNTPNLAGRWSLLQVE--------PLNDTERMLALAENM-LDRYGI 1352 SPR N AGRWSLL + P ++ + A M LDRYGI Sbjct: 1286 --------ASPRTGLRR-NAAGRWSLLAGDSSASDASYPAQRLDQQIESACLMLLDRYGI 1336 Query: 1353 ISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQ 1412 + R + E + + + R +ED G + GRFV G G QFA + LR + Sbjct: 1337 VFRDLALEETTLPRWRDLHAMFRRLEDRGLVRGGRFVSGFTGEQFALPQAMKALRACRQR 1396 Query: 1413 ATQTRHYTPVALSANDPANVWGNLLP 1438 T PV ++A DP N+ G +LP Sbjct: 1397 PLAT--MPPVTVAAADPVNLIGTVLP 1420 >UniRef50_A8RJ57 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ57_9CLOT Length = 1405 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 450/1497 (30%), Positives = 694/1497 (46%), Gaps = 205/1497 (13%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL--FRE 72 F PAT WF + F +PT +Q + W A +H LV APTG+GKTL+AFL +D+L E Sbjct: 13 FLPATESWFRKTFGEPTKIQREAWPAIADGKHVLVSAPTGTGKTLSAFLVFIDQLGGLAE 72 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE-------RRRRGETEV- 124 GE E + ++Y+SP+K+L D++ NL+ PL+GI E R G + Sbjct: 73 RGELKEELY------VIYVSPLKSLAGDIRENLRKPLEGIGAEAPGESKAESRPGNPSIG 126 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHA 183 ++ IRTGDTP +ER ++ ++PP ILI TPESLYLMLTS++ R+ L+ + +I+DE+HA Sbjct: 127 QIQTAIRTGDTPQKERQRMVKHPPHILIITPESLYLMLTSKSGRQVLKTAKAIILDEIHA 186 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 + +KRGAHL LS+ RLD L QRIGLSAT+ AA+L + P + P + Sbjct: 187 LIDTKRGAHLMLSVARLDKLCGRRLQRIGLSATIEPLELAAAYLSPE-PAVICAPSMDKQ 245 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 I+++ A G R+ +W + + + L +S I F+ R Sbjct: 246 VDIQVI----------GTAPAVGR-----RKDPVWEELGMAVYRQCLSCKSVIAFSEGRR 290 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 EKL +N L D F AR HHGS+SKEQ Sbjct: 291 YVEKLAYYVNLL------------------------------GGDGF-ARVHHGSLSKEQ 319 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R E+ L+ G LR + ATSS+ELGID+G V+ V+QV P +++S +QR+GRAGH G V Sbjct: 320 RDEVERDLREGRLRLLCATSSMELGIDVGDVEQVLQVGCPRTISSTMQRLGRAGHNPGRV 379 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 S +PRT + V + + G +E PP LDVLAQ V+ A+ ++ +D+ Sbjct: 380 SVMYMYPRTAPESVYCGMTAQVARRGGVERANPPRMCLDVLAQHLVSMASGESYSIDDVM 439 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 + R+ P+ + R+ + L ML+G Y RP+++++R G + +++LA Sbjct: 440 DVLERSYPFYQVTRKDVEDVLAMLAGDYEHSREIPVRPRILYDRIHGRVAGDVYSRMLAT 499 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 +GGTIPD+GMY+ +G ++GELDEE VYESR+ D LG+ WR+ + +D Sbjct: 500 AAGGTIPDKGMYAAKTEDG------VKLGELDEEFVYESRIGDRFMLGSFGWRVVRQDKD 553 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAE----LGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 VIVT AP ARLPFW+GE GR G ++G+ +G L E Sbjct: 554 SVIVTQAPAEGARLPFWKGETKGRDLRTSLAFGRILGELEKACREGELEKALEKLGLDES 613 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 ++ + G I Q AT +P R +V+E +D G ++++H+ +GRRV+ P ++ + Sbjct: 614 ASV-HASGFITRQIQATEGLPDDRTIVVEHFKDSTGSHQVMVHALFGRRVNGPLSLVLRH 672 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 I G D V +DG + P +LP+ +F P+++ ++ + + LF Sbjct: 673 MIRNTMGMDVGSVDEEDGFLL-YPYGREQLPEGLLFQINPDQVRPVLEAILPDTPLFGMT 731 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FR AARAL+M + G R PLW QRL+++++L PD P+I ET RECL+ +D+ Sbjct: 732 FRYNAARALMMGMKRNG-RQPLWMQRLKSTEMLSSLMDQPDHPLIRETKRECLEHQWDIS 790 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 + ++ R+ G I + ++ PSP + + AE MY+ + R +V Sbjct: 791 GVMEILARIRSGFITVREIWLDVPSPMSLPFQWQAEAEEMYEYSPVTPKIRQTV------ 844 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRA-KGEEGLFDLLRELGPMTVEDLAQ 958 E L +++ EEL R R+ + EE L LL M DL Sbjct: 845 -----------QEDLKKALLKPTPEELSRGWSRRKMPENEEELHSLL-----MMEGDL-- 886 Query: 959 RHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDD-----AARLRDALGVRLPESLP 1013 G + A +LE L ++ LAC + AA D L + Sbjct: 887 -EAGELDIPADWLEAL------------ARQGLACYVEPGIWIAAEHEDEYMRALQQQDE 933 Query: 1014 EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQL-REQGLVMNLQQ 1072 E +H V R L TA + + L + E L +L R + V + Q Sbjct: 934 EAAMHIVR--------RMLYYRGGQTAVDVRERYFLSEEMTEALLDKLCRCKKAVED--Q 983 Query: 1073 DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGV 1132 ++ ++++ R R ++ R T A+ YA L+ R A+ ST+ Sbjct: 984 GVYYHEKLYERAREGHIRILRSQTATQPASHYAALMAAR-----------AVTHSTAE-- 1030 Query: 1133 YEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGE 1192 + + +E+ P WE+ RV Y + +LD LLA G W ++ Sbjct: 1031 ----EQLREAVEKGCRKPCPVRFWENVYFARRVERYGASLLDRLLAQGDYFW----RMSP 1082 Query: 1193 DDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGES 1252 + L ++ E+ A A+ A + + L GA F + +++ ++ Sbjct: 1083 EGTLCFCSYEDIDWEA--SAGAETAGLKGDELLMYQELKRRGASFLKFLTKIPKE----- 1135 Query: 1253 VDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSP 1312 + QE L +L +G++ +D + P+R + + R Q V+ Sbjct: 1136 ---GSAQEVLLSLAEKGLVCADSFVPVRQWQNQDKVKKVAVR-------------QRVNT 1179 Query: 1313 RVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAV-IAENIPGGFPSMQ 1371 RV + AGRW +++ E L E D I+ R+ + P +Q Sbjct: 1180 RVMALS---AGRWDIVRPVRKYGPEEWL---EQFFDENMILCRETFRKSVQAVSDSPYVQ 1233 Query: 1372 T----------------LCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQ 1415 T + R E +GRI RG FVEG+ GAQF D + T A + Sbjct: 1234 TGEDGKKWEWSWAQALEILRIWEYTGRIRRGYFVEGMSGAQFVRGEDYDAV----TGALR 1289 Query: 1416 TRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGK 1472 V L+ DPA VWG +L P L AG V + GKL + + G+ Sbjct: 1290 EPDDHTVWLNGTDPALVWGKVLELPEKCGFLAV---AGTAVALKAGKLAAVMERQGR 1343 >UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkholderia cepacia complex RepID=B1K9C8_BURCC Length = 1518 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 485/1566 (30%), Positives = 698/1566 (44%), Gaps = 243/1566 (15%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 P++ DVF P WF R F PT Q W LV APTGSGKTL AFL AL Sbjct: 24 PAARALDVFHPVVAAWFTRTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTLTAFLCAL 83 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 D L R+ + + ++Y+SP+KAL D+ NL PL GIA+ + G + Sbjct: 84 DDLVRDAL--AHDGTLPDATLVVYVSPLKALSNDIHVNLDAPLAGIAESLAQLGLPVPAI 141 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVA 185 R +RTGDT ER+ L + P +L+TTPESLY++L+S + R+ L V +VI+DE+HA+A Sbjct: 142 RTAVRTGDTTQAERAALRKRAPHVLVTTPESLYVLLSSASGRQMLSNVRSVIVDEIHALA 201 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-----RPVTVVNPPA 240 SKRG+HLALSLERLDAL + RIGLSAT + VA FL G R +V+ Sbjct: 202 SSKRGSHLALSLERLDALTGRALPRIGLSATQKPIDAVARFLVGGPADAPRDCAIVDTGH 261 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 R + + +P ++ V + +W + I HR+T+VF N Sbjct: 262 TRERDLALELPNVPLEPVMAT--------------DVWEQVYDRIAGLAAAHRTTLVFVN 307 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R AE++ L A RL + +IA +HHGS++ Sbjct: 308 TRRTAERMARHL----ADRLGKD-AIA--------------------------AHHGSLA 336 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 KE R EQ LK GEL+ +VAT+SLELGID+G VDLV QV +P +A LQR+GR+GH V Sbjct: 337 KEHRFDAEQRLKRGELKLLVATASLELGIDIGDVDLVCQVGSPRGIAPFLQRVGRSGHHV 396 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 GGV KG FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA A Q D Sbjct: 397 GGVPKGRLFPLSRDELVECAALLDCVQRGELDALRIPEAPLDVLAQQIVAEVACAEWQED 456 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGA 538 Y+ RAAP+ L R FD + ML+ + S G A+ + V G + R A Sbjct: 457 ALYASFTRAAPYARLARERFDEVMKMLAEGFTSRRGVRGAYLHRDVVG---GTVRGRRNA 513 Query: 539 QLLAVTSGGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 + A TSGGTIPD Y+VLL P+G + VG ++E+ ES D+ LG S+RI Sbjct: 514 MMTATTSGGTIPDMADYAVLLEPQGIQ------VGTVNEDFAIESLTGDVFQLGNQSYRI 567 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLH----LLADG-------- 645 ++ +V V A G+S +PFW GEG GR EL +G L ADG Sbjct: 568 IRVETGRVRVEDAQGQSPGIPFWLGEGLGRSDELSAAVGRLRARLDGLFADGDRQARTNA 627 Query: 646 --------------------AFFSGTIPP------------------------WLAEE-- 659 A PP WL ++ Sbjct: 628 AKHANVTEAGKTPSRGKSRQAAAETDAPPASPDNAPGGTALAPTESRLAPALRWLVDDLH 687 Query: 660 ---NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVA 716 + I + R A G +P LV+ER DE G ++++HSPYG R++ W +A Sbjct: 688 LSPDAARQIADYLARTRAALGALPTQDTLVIERFFDESGGTQLVIHSPYGSRINRAWGLA 747 Query: 717 IAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALF 776 + R + + A+DD I+ + D ++ +A+ + +F Sbjct: 748 LRKRFCRNFNFELQAAATDDAIILSLSLAHSFALDEVWRYLRSASAEHVLIQALLDAPMF 807 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPD---------------- 820 R+R A AL +P T G RT QR+++ LL A +PD Sbjct: 808 GVRWRWNATTALALPRFTGGRRTAPQLQRMKSDDLL--ATVFPDQVACLENIVGEREIPH 865 Query: 821 FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMY 880 P++ +TL +CL D D L+RR+ G I++ PSP A +L + + Sbjct: 866 HPLVDQTLDDCLHDAMDTDGWLALLRRIESGAIELIARDLPAPSPLAAEIL--NAKPYAF 923 Query: 881 QSDAPLAERRASVLS----LDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAK 936 DAPL ERR + D E +L LD I V +E L + Sbjct: 924 LDDAPLEERRTQAVQSRRWSDPETADDLGA-------LDADAIDAVRDEAWPL-----VR 971 Query: 937 GEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFP---AMISGQERLAC 993 + + D L L +D A H G E +A E A K P A+ ERL C Sbjct: 972 DADEMHDALLTLA-CVADDEAHAHAGWPERLAELAERRRATKLATPGGAALWVPVERLVC 1030 Query: 994 M----DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSL 1049 + DA R +++P + + + L D+ L +T + +A L Sbjct: 1031 LRALHPDA---RATPALKVPAACAQPW--EADAALVDVIRARLTGFGPLTLDAIAAPLGL 1085 Query: 1050 GIAIVEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATT 1103 A + L L +G VM D W + R+ +++ R PV Sbjct: 1086 PPASIATALAALEREGYVMRGRFTPGATTDEWCERHLLARIHRYTVKRLRREIEPVERAD 1145 Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 + R L Q + P T G+ G D + V+EQL G AS WE +LPA Sbjct: 1146 FMRFLFHWQHLTPDTRGT-------------GRDALAAVVEQLEGYEAAASAWEDALLPA 1192 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDG-------LVALHLQEYAA-ESFTPAEAD 1215 R+ DY++ LDEL +G ++W+ G +V L + +A ++ +A Sbjct: 1193 RLTDYTAGGLDELCRSGKLVWTRIGAPARAAGTPVKTTPIVLLPRRHLSAWQALRDPDAQ 1252 Query: 1216 QANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDI 1275 A + Q A+ A G +F + + I L++AL LV G++ +D Sbjct: 1253 PALSARATQVRDALAAHGAMFFDALLDELHMLPI-------ELEQALGELVSAGLVNADS 1305 Query: 1276 WAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP--- 1332 +A LRAL + + + S + R RRG + + AGRW+L+Q + Sbjct: 1306 YAGLRALLKPA--VKRSATYAPRTRRGGAL----------IGGMDDAGRWALVQRQAPPD 1353 Query: 1333 -----------LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCR---SME 1378 D + + + +L RYG++ + + E PS + L R +E Sbjct: 1354 DDAPTPKRGPTTTDPDALEHIVWTLLRRYGVVFWR--LLEREADWLPSWRELVRVLQRLE 1411 Query: 1379 DSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLP 1438 G I GRFV G G QFA I LR+L Q ++ V ++ DP N+ G LLP Sbjct: 1412 ARGEIRGGRFVAGFAGEQFALPEAIPILRELRRQPGDGQY---VCVTGADPLNLAGTLLP 1468 Query: 1439 WPAHPA 1444 PA Sbjct: 1469 GDKVPA 1474 >UniRef50_C8W110 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=C8W110_DESAS Length = 1502 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 342/956 (35%), Positives = 509/956 (53%), Gaps = 82/956 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P R WF +PT +Q Q W + EH L+ APTGSGKTL AFL+AL +L Sbjct: 8 LFHPLIRKWFAEKVGEPTDIQIQAWPRITKGEHVLITAPTGSGKTLTAFLWALQKLITGD 67 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R R+LY+SP+KAL DVQRNL PL+ + GE ++V R+G Sbjct: 68 WPLGR-------VRVLYVSPLKALNNDVQRNLLQPLQELRAYFAEAGELFPPIQVLTRSG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAH 192 DTP ER ++ R PP+ILITTPESL L+L+S+ R L GVETVI+DE+HAV +KRG H Sbjct: 121 DTPQNERRQMLRKPPEILITTPESLNLLLSSKNNRLILSGVETVILDEIHAVLDNKRGTH 180 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-------------DRPVTVVNPP 239 L +++RL LL QRI LSATVR VA F+GG RP+ ++ Sbjct: 181 LITAVDRL-VLLAGEFQRIALSATVRPLEPVAEFVGGFKACRDGEDCRYQKRPLVILRSA 239 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 A +H + + D +G E+ + ++W + + + + +T+VF Sbjct: 240 AKKHYNLIV--------DAIERNNGGAEEVE---QDALWQALAAVLTKVIKENIATLVFC 288 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R EKL+ +N DAA ES + SHHGS+ Sbjct: 289 NNRRAVEKLSRYIN---------------DAAG-ES---------------LVYSHHGSL 317 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 +KE R EQ LK+GEL+ +VAT+SLELGID+G +D VI V TP S+ + +QRIGRAGH Sbjct: 318 AKELRLTVEQKLKNGELKGIVATNSLELGIDIGKLDTVILVQTPPSLTAAIQRIGRAGHS 377 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 VG VS+G+ FP RD V++AV+ + A +E +TP PLDVLAQ ++ A++ Sbjct: 378 VGQVSRGILFPICGRDFVEAAVVSRSLPAVEIELITPIEAPLDVLAQVLLSMTAVETWDA 437 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 DE Y+ ++ + P+++L R+ +D L+ML+GRY +P+++W++ + AR G Sbjct: 438 DELYAFLKTSYPYRNLSRKSYDLLLEMLAGRYADTRLRELKPRIIWDKLDRTIKARDGVA 497 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 L GGTIPDRG Y + L + + K +GELDEE V+E V + LG W+I Sbjct: 498 RLVYLGGGTIPDRGYYDLRLLDTKAK-----IGELDEEFVWERSVGETFMLGTQVWKIMC 552 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL----HLLADGAFFSGTIPPW 655 IT + V V P +PFWR E R E IG FL L +F + P Sbjct: 553 ITHNDVEVIPGAQTINIIPFWRAEEQNRDFFYSEKIGLFLEEAEQNLKTDSFAHQLVTPN 612 Query: 656 LAEENTIANIQGLIEEQRNATGI-VPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHE 711 + + ++ Q+ A G +P H+++E D + ++I+H+ +G +V+ Sbjct: 613 TWSVYAVERLIEFLKRQKEAAGQPLPHRHHILIEHFADPLNTADSKQVIVHTLWGGKVNR 672 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVG 771 P+A+ +A +G + S++ I+ +P + L P+ L +R + Sbjct: 673 PFAMGLAAAWEQKFGYPLEIYVSNNSIMLMLPHSFAL--QELFSLVSPQNLEDFLRGKLE 730 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 SS F A+FRE A ALL+P R PLW RLRA +L Y DFP+++ET R C Sbjct: 731 SSGFFGAKFRENAGTALLLPRVNFKKRMPLWLNRLRAKKLQAAVSSYADFPIMIETWRTC 790 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L+D +DL +++L+ +N G I+IS+ T PSPFA+ +++ ++MY+ D P ++R++ Sbjct: 791 LKDEFDLDMVKQLLDEINDGRIKISETVTHQPSPFASDVIWRQTNKYMYEDDTPFSDRQS 850 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 L ELL+ L+ + ++RQ+ +L+R APG E L ++E Sbjct: 851 ---GLSGELLKELVYSPHLRPEIPEALVRQLNGKLKRTAPGYAPTDGEELLLWIKE 903 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 121/429 (28%), Positives = 176/429 (41%), Gaps = 55/429 (12%) Query: 1124 LFASTSPGVYE---GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATG 1180 LF +T GV E ++ + +EQL G+ A LWE ILPAR+ Y + +D L+ T Sbjct: 1106 LFLATYQGVVEKGTNMEDLQARLEQLFGLISQAQLWEEAILPARLETYYTSWMDSLMQTS 1165 Query: 1181 AVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQ 1240 ++W G + V L+E E F PAE Q +Q + F Sbjct: 1166 DLVW-----FGRGNKRVVFCLRE-DLELFPPAEEGQGPEDKVQARDL---------FPDP 1210 Query: 1241 ISQRIRDKIGESVDLSA--LQEALWALVWQGVITSDIWAPL-RALTRSSSNARTSTRRSH 1297 + + + L + L + LW VWQG I +D +A L R L + + + Sbjct: 1211 LGKYDFFTLSRHTGLPSDDLTQRLWRHVWQGNIANDSFAVLRRGLLTKFTPLQVEGKHGF 1270 Query: 1298 RARRGRPVYAQPVSPRVSYNTPNLAGRWSLL----QVEPLNDTERMLALAENMLDRYGII 1353 R G R S + P L G W L + +P+ E + + RYG++ Sbjct: 1271 GRRSG--------YSRWSASRP-LQGNWYALSECEEKDPIEREELVKERIRQLFSRYGVL 1321 Query: 1354 SRQAVIAENIPGGFPSMQ-----TLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRD 1408 R+ + E P MQ R ME SG I G F + G QFA R + R Sbjct: 1322 FRELIQQE-----LPEMQWRRIFRTLRLMEFSGEIYAGHFFAQIIGLQFASR---EANRL 1373 Query: 1409 LATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLA 1468 L + Y L+A DPA+ G LP +PTR A VV G +L L Sbjct: 1374 LHKGLNEKSIYW---LNAADPASPCGLKLPGLDED---LPTRLATNFVVFHGTRLKLVAK 1427 Query: 1469 QGGKKMLVWQEKEELLAPEVFHALTTALRRE--PRLRFTLTEVNDLPVRQTPMFTLLREA 1526 + GK++L+ ++ PE F T L RE P + +N P ++P L+ Sbjct: 1428 RNGKELLIKAGPDDASLPEYFAFCKTLLTREFNPLKSIVVESINGRPALESPYKKALQGI 1487 Query: 1527 GFSSSPQGL 1535 GF +GL Sbjct: 1488 GFIGEYKGL 1496 >UniRef50_Q01U88 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U88_SOLUE Length = 1348 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 472/1490 (31%), Positives = 678/1490 (45%), Gaps = 206/1490 (13%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P ++WF R PT Q + W V E L+ APTGSGKTLAAFL +D L R Sbjct: 5 LDPLVQEWFDR-LGAPTEPQLRGWPVIRAGEDVLISAPTGSGKTLAAFLICIDSLVRRA- 62 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R + ++Y SP+KAL DV +NL+ PL I RG +RVG+RTGD Sbjct: 63 ---RTGELPDHTEVVYCSPLKALSNDVHKNLERPLAEIRALAEERGVKLAPIRVGLRTGD 119 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A +R ++ R P IL+TTPESLY++LT+ + RE L GV TVI+DE+HAVA KRG+HL Sbjct: 120 TKASDRQRMLRERPHILVTTPESLYILLTAEKPREMLAGVRTVIVDEIHAVADDKRGSHL 179 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 AL+L RLD L QRIGLSATV+ +VAAFL +V+ R ++ + VP Sbjct: 180 ALTLARLDRLA-GRPQRIGLSATVKPLEEVAAFLSDK--ACIVHVGHRREMELAVEVP-- 234 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 D++ VAS +W I + + + +R+T++F N+R L+E++ L Sbjct: 235 -RDELGPVASN-----------EMWGGIYDRLAELIAANRTTLIFVNTRRLSERVAHHLG 282 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E R+ V HHGS+S+ R E+ LK Sbjct: 283 E----------------------------RLGPGAVL---PHHGSLSRPLRLEAERKLKD 311 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GELR VVAT+SLELGID+G VDLV Q+ +P ++ LQRIGRAGH VG + +G F TR Sbjct: 312 GELRAVVATASLELGIDIGTVDLVCQIGSPRAIGVALQRIGRAGHWVGAMPRGRLFTTTR 371 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +L++ A +V + G L+ L P N LD+LAQQ VA A + DE + R P++ Sbjct: 372 DELIECAALVRAIRKGELDKLEIPCNALDILAQQIVACCATEEWGEDELFELARATWPYR 431 Query: 494 DLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 LPR FD + +LS + G A+ + NR A+L A+TSGG IPD Sbjct: 432 TLPRSDFDDVVAILSEGISTARGRSGAYLHRDAVNRRLRGRRG---ARLAAITSGGAIPD 488 Query: 552 RGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 Y V+ PEG +G +DE+ ES D+ LG TSWRI+++ +V V A Sbjct: 489 SANYLVVAEPEGIT------IGTVDEDFAVESLAGDVFLLGTTSWRIRRVEAGRVRVEDA 542 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI-----ANI 665 G +PFWRGE GR EL + +A + WLA E + Sbjct: 543 HGAPPGIPFWRGEAPGRTIELSHEVSALREQIASRGVEAVE---WLAAECGLDRRGAEQA 599 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 + E A G +P + +V ER DE G ++ILH+P+G R++ W +A+ R + Sbjct: 600 AEYVREGCAALGALPATNTIVAERFFDEGGGMQLILHAPFGARINRAWGLALRKRFCRSF 659 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 + A+D+GIV + + D PE ++ +A+ + +F AR+R A Sbjct: 660 NFELQAAATDNGIVISLGEQHSFPLDVVFEFVRPENAKYVLTQAMLDAPMFGARWRWNAT 719 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLL-----------EIAQG---YPDFPVILETLREC 831 RAL + G + P QR+RA L+ E G PD P++ ET+ C Sbjct: 720 RALAILRFAGGRKVPPPIQRMRADDLMAAVFPDQAACAENLTGDIRIPDHPLVKETIDNC 779 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L + DL L ++R + G I+ + T SPF+ +L + Y DAPL ERRA Sbjct: 780 LYEAMDLVGLTEMLRCIEDGTIRTIAIDTAEASPFSHEIL--NANPYAYLDDAPLEERRA 837 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 + L L ++ D LDP+ IR V EE + L+R+ + Sbjct: 838 RAVQLRRTLRTDV---TDGAGALDPEAIRTVAEE---------------AWPLVRDADEL 879 Query: 952 TVEDLAQRHTGSSEEVASYLENLLAVKR--IFPAMISGQERLACMDDA---ARLRDALGV 1006 L + E A + L A R ERL + A A+ L Sbjct: 880 HEALLGMVILPARAEWARFFAELSAAGRATTMDGFWIAAERLDLVRRACPGAQFTPPLDA 939 Query: 1007 -RLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQG 1065 L +LPE V+ LR F + A LA + +L I IVE L QL +G Sbjct: 940 PPLSRALPESREACVAEILRGWF----ECAVPLRASGLARDLALPIDIVEIALAQLEAEG 995 Query: 1066 LVMNLQ--------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPA 1117 ++ + W + R+ ++ R PV T +A + Q + Sbjct: 996 QILRGHFLSRGGDDEIEWAHRRLLARIHRLTIGRLRREIEPVTTTQFAAFVERWQHLAAG 1055 Query: 1118 TDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELL 1177 T GV+G +RVI+QL G+ P + WES++LP R+ +YS +LDEL Sbjct: 1056 TQ-------------LHGVEGALRVIQQLQGLEWPVAAWESEVLPRRIANYSPALLDELC 1102 Query: 1178 ATGAVIWS---------------GQKKLGEDDGLVALHLQEYAAESFTPAEADQANR-SA 1221 +G V+W G++ +AL L+E A E A S Sbjct: 1103 LSGEVMWGRLSPHPAFERQTDGQGRRVRPTRVAPLALFLREDAGWLLATPEPQPAEALSH 1162 Query: 1222 LQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRA 1281 + ++ L + GA F ++++ E +++ALW LV G++T+D + LRA Sbjct: 1163 AAREVLVSLQNRGASFFHELARNTDRAAAE------IEDALWELVAAGLVTADGFENLRA 1216 Query: 1282 LTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL---QVEPLNDTER 1338 L + N R + R H AGRW+LL Q P + ER Sbjct: 1217 LI--NPNRRHAVRPRH-----------------------AAGRWALLRHAQDAPPDYVER 1251 Query: 1339 MLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFA 1398 A +L+R+G++ R E + + + R ME G I GRF G QFA Sbjct: 1252 ---FARQLLERWGVVFRDIAARETLAPPWRDVLVALRKMETRGEIRGGRFAAAFVGEQFA 1308 Query: 1399 ERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVP 1448 +D LR + A D W L PW A + +P Sbjct: 1309 LPEALDLLRAVR--------------RAGDVHVDWNTLPPWLAADRSALP 1344 >UniRef50_A9KJU0 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridiales RepID=A9KJU0_CLOPH Length = 1381 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 449/1486 (30%), Positives = 705/1486 (47%), Gaps = 190/1486 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+F T WF +A +PT VQ + W A LV APTG+GKTL+AFL +D+L R Sbjct: 7 DMFDSVTSRWFQQALGEPTMVQKEAWRSIADGFDTLVSAPTGTGKTLSAFLVYIDQLMRL 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER-RRRGETEV------N 125 RE ++ ++Y+SP+K+L D++ NL+ PL GI E ++ ++E+ + Sbjct: 67 A----REEKLKEEIYVIYVSPLKSLAGDIRENLKKPLHGILGEIIKQEKDSELKKQIIPS 122 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAV 184 + V +RTGDT ER ++ ++PP ILITTPESLYL+LTS++ + L VIIDE+HA+ Sbjct: 123 ISVAVRTGDTTPAERRQMIKHPPHILITTPESLYLLLTSKSGQGMLNTARVVIIDELHAL 182 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 SKRGAHL LS+ RLD L QRIGLSAT+ A +L + P +V P + Sbjct: 183 IDSKRGAHLMLSIARLDRLCGQPLQRIGLSATIEPLELAANYLSPE-PAKIVAPTMTKKR 241 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + I P++ + R+ +W I I D + RS I F R Sbjct: 242 KFMITSPLSEEVGI--------------RKTPVWEEIAAIIYDSCCKARSVIAFVEGRRF 287 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AEKL +N+L D F AR+HHGS+SKEQR Sbjct: 288 AEKLAHYVNQL------------------------------GGDGF-ARTHHGSLSKEQR 316 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 EQ+L+ G+LR + ATSS+ELGID+G +D V Q+ P +++S +QR+GRAGH VS Sbjct: 317 LEVEQSLRDGKLRLLCATSSMELGIDVGEIDEVFQIGCPRTISSTMQRLGRAGHNPDRVS 376 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 FPR+ + + + E GR+E+ PP DVLAQ V+ A D +V E Sbjct: 377 VMQMFPRSPIEGLYCGLTAEVAKQGRVEDAKPPRMCFDVLAQHLVSMATGDGYEVQEVLD 436 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 + RA P++++ + L ML+G Y RP+++++R + P +++LAV+ Sbjct: 437 ILARAYPFREVTLKDIHDVLKMLAGDYEHEREIPVRPRILYDRIHDRVEGDPYSRMLAVS 496 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 +GGTIPD+G+Y V EG ++GELDEE VYESRV + LG W+I I +D Sbjct: 497 AGGTIPDKGLYQVKSEEG------VKLGELDEEFVYESRVGEKFLLGTFGWKIVNIQKDA 550 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL-----ADGAFFSGTIPPWLAEE 659 VIV PA SA+LPFW+GE GR + G G+ L L AD +F + + ++ Sbjct: 551 VIVAPASSGSAKLPFWKGEIKGRGLKTGLAFGELLRKLSRANEADCSF--EELKAFGMDQ 608 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 I+ Q ATG +P + +++E +DE G +++++HS +GR V+EP A+ I Sbjct: 609 AAATGAGEFIKRQIKATGCLPDDKTILIEHFKDETGSYQMMVHSVFGREVNEPLAILIQE 668 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGK-LPDAAIFLFEPEKLLQIVREA-VGSSALFA 777 + V DDG + + DG+ LP+ + + P LLQ V EA + ++ LF Sbjct: 669 AASRSLQRVINYVVDDDGFL--LYPYDGQPLPEGLLTMISP-ALLQGVLEARLIATPLFQ 725 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD 837 FR R+++M R G R PLW QR+R +Q+L+ Y P+I ET RECL+D+++ Sbjct: 726 ITFRYNMGRSMMMGVRKNG-RQPLWVQRMRCAQMLDSILSYESHPIIRETKRECLEDIWN 784 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 LP L ++ + I++ ++ PSP + MY AP ++ LD Sbjct: 785 LPGLMHVIHGILSNTIEVREMFLELPSPMSLPFRRQTEGAMMYDY-AP-----STTGILD 838 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 + R L Q + L P+ + +EE +R E+ L LL G M +L Sbjct: 839 AS--RKALEQANN---LQPEH-KMIEEVSKR---ASLPVNEQELHTLLMIEGDMIAGELK 889 Query: 958 QR----HTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP 1013 + SE + Y+E P + E+L + AL R E+ Sbjct: 890 VSIDWLLSLVSEGLVHYIE---------PGLWIATEQLELYE------RALNKRETEACQ 934 Query: 1014 EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQD 1073 +I L R +RY A+ +QL + L ++ + L L +QG V+ Q + Sbjct: 935 KI-LRRA--------VRYRGGQAV---KQLVERYYLPEDVILDNLTSLCDQGSVIK-QGE 981 Query: 1074 IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVY 1133 + ++ + ++ R+ + + + LL G AS Sbjct: 982 YYYHTTLYEKALKLTVYERRDQIKTLPKERFTALL----------AGKTEFTASPK---- 1027 Query: 1134 EGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGED 1193 + + +V+EQ G SL E+ +LPARV Y ++LD LL+ G + K Sbjct: 1028 ---EQLSKVLEQFVGSVFQPSLLENVLLPARVAKYRPDLLDALLSQGYFQYRITK----- 1079 Query: 1194 DGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESV 1253 +G+ + ++ E+ P+ + +Q + + GA F ++ + K Sbjct: 1080 EGISFHYSEDVDWEASLPSPEPPLEET--EQLLYEAMQKRGASFLNSLTSLLAGK----- 1132 Query: 1254 DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPR 1313 +L EA+ +L+ +G++ +D + P+R + + + R Q V+ + Sbjct: 1133 ---SLYEAVLSLLEKGLVCADSFVPIRMWLNNEKLKKGNVR-------------QLVNAK 1176 Query: 1314 VSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTL 1373 V + +GR+ + PL + M E + D+ I+ R+ V + + Sbjct: 1177 VMVMS---SGRFEV--ARPLKEA-TMEQKLERLFDQVVIVCRETVRGISWAEALKELSV- 1229 Query: 1374 CRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP--VALSANDPAN 1431 E + R RG FVEGL G QF R +D + H + LSA DP Sbjct: 1230 ---WEYTERARRGYFVEGLSGIQFI------REKDFISTMYTLEHPKKEILWLSAMDPYQ 1280 Query: 1432 VWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVW 1477 +WG P+ + + + AG +V +S G + + GK + V+ Sbjct: 1281 IWGKYFPYEKERSFV---QVAGTVVALSSGVPIAVFERQGKTLKVF 1323 >UniRef50_Q3BSA5 ATP-dependent DNA helicase Lhr n=12 Tax=Bacteria RepID=Q3BSA5_XANC5 Length = 1464 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 459/1489 (30%), Positives = 685/1489 (46%), Gaps = 179/1489 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF + F PT Q W H LV APTGSGKTL AF A+D L R+G Sbjct: 8 FHPVVAAWFAQTFAAPTPAQVAAWPAIQAGRHTLVAAPTGSGKTLTAFFAAIDALIRDGL 67 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +R++Y+SP+KAL D+ NL PL+GI G +V +R +RTGD Sbjct: 68 ANG--GALPDETRVVYVSPLKALSNDIHLNLDAPLQGIRAALVAGGLPDVPIRTAVRTGD 125 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 TP +ER++ R PP IL+TTPESLY++L S + R +L+ V TVI+DE+HAVA KRG+HL Sbjct: 126 TPQRERAQARRTPPHILVTTPESLYVLLGSASGRASLQHVRTVIVDEIHAVASDKRGSHL 185 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG------DRPVTVVNPPAMRHPQIR 247 +L+LERL L+ R+GLSAT + VA FL G P +V+ R + Sbjct: 186 SLTLERLQRLVAQPITRVGLSATQKPIETVAQFLVGVDADGVPPPCEIVDIGYTRKRDLA 245 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +P + V S W + + +HR+T+VF N+R +AE+ Sbjct: 246 LALPPTPLSVVMS--------------NDQWLQVYADVAALAQQHRTTLVFVNTRRMAER 291 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L +L RV + HHGS+S+E R + Sbjct: 292 AARHLGDLLG-----------------------KQRVSA--------HHGSLSRETRLLA 320 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 Q LK+G+L +VAT+SLELG+D+G VDLV Q+ +P S+A+ LQR GR+GH+VGG K Sbjct: 321 VQRLKAGDLTVLVATASLELGLDIGDVDLVCQLGSPRSIATFLQRAGRSGHKVGGTPKAR 380 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 FP+TR +LV+ A +++ + G L+ L P+DVLAQQ VA AA + D ++ VR Sbjct: 381 LFPQTRDELVECAALLDSIRRGELDALRIVTAPVDVLAQQIVAEAACEDWDEDALFALVR 440 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 RA P+ L R FD+ + ML + + G + + + +R L AR GA++ A+TS Sbjct: 441 RAWPFAGLSRATFDSVVRMLCDGFSTRLGPRAGYLHRDAVHRR---LHARRGARMTALTS 497 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 GGTIP+ G YSV+L EK +G ++E+ ES D+ LG S+RI ++ +V Sbjct: 498 GGTIPETGDYSVVLEPQAEK-----IGTVNEDFAVESLTGDVFQLGNASYRILRVEAGRV 552 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP-----PWLAEEN 660 V A G +PFW GE GR EL + L + A T P WL E Sbjct: 553 RVEDAKGAPPNIPFWLGEAPGRSDELSAAVS---RLRGEIAARLDTAPHQSARDWLQREL 609 Query: 661 TIA--NIQGLIEEQRNAT---GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 ++ + L++ NA G +P + LV+ER D G ++++HSPYG R++ W + Sbjct: 610 EMSAEAARQLVDYLANACTALGAMPTQQCLVMERFFDASGGTQLVIHSPYGSRINRAWGL 669 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 A+ R + + A++D IV + + + ++ +A+ + L Sbjct: 670 ALRKRFCRTFNFELQAAATEDAIVLSLSTSHSFALEEVGRYLHSSSAEHVLIQALLDAPL 729 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDF 821 F R+R A A+ +P + G++ QR+++ LL + PD Sbjct: 730 FGVRWRWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENLVGEREVPDH 789 Query: 822 PVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQ 881 P++ +TL +CL D +++R L G + + PSP A L F+ Sbjct: 790 PLVAQTLEDCLHHAMDSDGWLQVLRGLESGAVTLVARDLAAPSPLAAEALNARPYAFL-- 847 Query: 882 SDAPLAERRASVLSLD--SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEE 939 DAPL ERR + + + LGQ LDPQ I V EE + + E Sbjct: 848 DDAPLEERRTQAVQSRRYTPQTSDDLGQ------LDPQAIAAVCEEAW-----PQPRDAE 896 Query: 940 GLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVK-RIFPAMISGQERLACMDDAA 998 + + L LG + V + + + + PA+ ER+ D Sbjct: 897 EMHEALVGLGVLPVAEATDAQWQAWLAALAAAGRASCIALHGSPALWVSAERI---DWFL 953 Query: 999 RLRDALGVRLPESLP---EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVE 1055 L V+ P P + + + +R+L L A L+H + A + Sbjct: 954 PLYRQATVQPPLQAPADCRVADWQRDWAVRELLRGRLSAVGPAQVPALSHALQVPEAEIA 1013 Query: 1056 EQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLL 1109 L L+ +G VM ++Q + W + R+ +L R PV+ YAR L Sbjct: 1014 LALAALQREGYVMAGQFNAHVQGEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLF 1073 Query: 1110 ERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 E Q V S G D + V+ QL G PA LWES++LPAR+RDY Sbjct: 1074 EWQHV-------------DSSSRVAGPDALAGVVGQLEGFEAPAVLWESELLPARIRDYQ 1120 Query: 1170 SEMLDELLATGAVIWSGQKKLGEDDG-------LVALHLQEYAAESFTPAEADQANRSAL 1222 LDEL G +W+ + G G +V L +E S +AD A S+ Sbjct: 1121 PAWLDELCTAGRTLWARLRPGGGRSGAALRSTPIVLLPRREAQHWSALARDADDAPLSSR 1180 Query: 1223 QQAIVAVLADGGAWFAQQISQRIRDKIGESVDL--SALQEALWALVWQGVITSDIWAPLR 1280 Q ++ VL GA F D+I ++ L + L++AL LV +G D +A LR Sbjct: 1181 AQRVMQVLQQQGALFF--------DEIADAAHLMNTELEDALSELVMRGRAHCDSYAGLR 1232 Query: 1281 ALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP-------- 1332 AL +S ++ R R R S AGRW+ ++ P Sbjct: 1233 ALLVPASKRPSALSRQRR--------------RASALGIRDAGRWAPVRALPDLPLAEAA 1278 Query: 1333 LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCR---SMEDSGRIMRGRFV 1389 + + +A +L RYG++ + + E P + L R +E G I GRF+ Sbjct: 1279 QRHQDTLEHVARTLLRRYGVVCWR--LLEREAAWLPPWRELLRMYQRLEARGEIRGGRFI 1336 Query: 1390 EGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLP 1438 GL G QFA D + L Q + +SA+DP+N+ G+LLP Sbjct: 1337 AGLSGEQFA---LPDAIAALRRARAQPLPQQWICVSASDPSNLLGSLLP 1382 >UniRef50_D2L062 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio RepID=D2L062_9DELT Length = 1472 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 353/947 (37%), Positives = 493/947 (52%), Gaps = 68/947 (7%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P WF +PT +Q W A EH L +APTGSGKTL AFL AL+ L Sbjct: 4 LFHPLVARWFSEHVGKPTDIQELAWPRIAAGEHVLAVAPTGSGKTLTAFLSALNSLATGA 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R + ++Y+SP+KALGTDV+ NL PL G+ GE LR IR+G Sbjct: 64 WPTGRVS-------VVYVSPLKALGTDVRANLLTPLAGLRRAFAAAGEDFPALRAEIRSG 116 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAH 192 DTP+++R ++ R PP+ILITTPESL L+L+S+ R L V VI+DE+HAVAGSKRG Sbjct: 117 DTPSEDRRRMLRQPPEILITTPESLNLLLSSQGGRGMLTAVRLVILDEIHAVAGSKRGVF 176 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 L ++ERL A L QR+ LSATV VAA +GG P ++ P + + IV Sbjct: 177 LLSAVERL-AGLAGEFQRVALSATVSPLETVAAMVGGFVPSGDLSDPVLTPRPVAIVQSR 235 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 A V D R S + + +L +RST+VF NSR EKL + Sbjct: 236 AEKRMDVRVHFAPWPDDRPPR-ASFIQILADDVRRRILANRSTLVFVNSRKFCEKLARLI 294 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 N+ P I +A +HHGS+S+E R E LK Sbjct: 295 ND-------DQPEI------------------------LAYAHHGSLSRELRQTVESRLK 323 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 +GEL+ VVAT+SLELGID+GAVD V+ V P +V++ +QRIGR+GH+VG VS+ +F P T Sbjct: 324 AGELKAVVATNSLELGIDIGAVDEVLLVECPPTVSAAVQRIGRSGHRVGEVSRAVFLPTT 383 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 +DL+++AV+ +E + P PLDVLAQ VA ++A VD +Y VR+A P+ Sbjct: 384 EKDLLEAAVMARAAHERDIEPIRPVSAPLDVLAQTLVAMCGVEAWDVDAFYQAVRQAWPY 443 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 +DL RR FD TL ML+GRY + P L + G + AR GA L SGG I DR Sbjct: 444 RDLSRRAFDLTLAMLTGRYAATRIRELAPLLAVDALDGTVAARKGALLRLYASGGVIADR 503 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 G Y++ + R+GELDE V+E+R+ + GA +WRI++IT V V+PAP Sbjct: 504 GYYAL-----RRQDSDGRLGELDEVFVWEARLGQVFAFGAQNWRIERITDADVFVSPAPA 558 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLH----LLADGAFFSGTIPPWLAEENTIANIQGL 668 S PFW G+ R +++ FL L D AF I E + G Sbjct: 559 GSVPAPFWLGDARSRDRHFSDLLAHFLEEADVRLDDPAFGEELIRDHCLEPGAAEALLGY 618 Query: 669 IEEQRNATGI-VPGSRHLVLERCRDEIGDW---RIILHSPYGRRVHEPWAVAIAGRIHAL 724 + Q+ ATG +P +RHL++E G ++ILH+P G P A+ + + Sbjct: 619 LRRQKEATGSGLPHARHLLVEVTATGPGGAPGNQVILHAPLGLSRTAPLALVLEAALSRK 678 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQ-IVREAVGSSALFAARFREC 783 +G V A +D + A +P G++ + P + + ++RE + S F A FRE Sbjct: 679 YGHAIPVFAGNDCVAATLP---GEIDPLDMLEAVPGRAVAGLLRERLEGSGSFGAAFREA 735 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALER 843 A RALL+P G R PLW RLRA +LL + DFP++LE R CL D++D LE Sbjct: 736 AGRALLLPRDGFGKRQPLWITRLRARKLLAAVASHGDFPMVLEAWRACLVDIFDPAGLEE 795 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN 903 + G + ++ T SPFA L++ +V E+MY +D A ++ S + + Sbjct: 796 FLAGARSGAVAVTVAHTRVQSPFAADLVWRHVNEYMYLTD-------AGTVAGPSGVRPD 848 Query: 904 LLGQV--DPGELLDPQ-VIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 L+ +V P PQ V+ + QRL PG G L + L+E Sbjct: 849 LVAEVARGPSRPAVPQAVVEAYVAKRQRLFPGYAPSGPAELLEWLKE 895 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 115/405 (28%), Positives = 168/405 (41%), Gaps = 57/405 (14%) Query: 1137 DGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGL 1196 +G+ +E+LA + L A LWE+ +LPAR R Y LD L T + W G G L Sbjct: 1091 EGLAEHLERLACLPLAAGLWEADVLPARCRAYDPAWLDAALETTGLAWFGA---GPKKVL 1147 Query: 1197 VALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLS 1256 A + F+P D + D A + + D G S + Sbjct: 1148 FA-RPDDLDLAGFSPPAPDPG-----------LFPDPRAGYDFST---LLDITGLSP--T 1190 Query: 1257 ALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA-RRGRPVYAQPVSPRVS 1315 AL E LW W+G T + A LR R + T S+ A R+GR + R + Sbjct: 1191 ALAERLWQAAWKGQATCNSLAVLR---RGVATDFTPEAASYEASRQGRRSLRRTNPARYA 1247 Query: 1316 YNTPNLAGRWSLLQV-----EPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSM 1370 P LAG W +V +P+ E + A +L RYG++ R + E P + + Sbjct: 1248 AALP-LAGSWRQPRVPEPPDDPVAREELAMDRARLLLARYGVVCRDVIGREAAPFAWAGI 1306 Query: 1371 QTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPA 1430 R ME SG ++ G F GL G QFA T +R LA T + + DPA Sbjct: 1307 FRALRRMELSGEVVSGEFFAGLSGPQFA---TGRAVRLLAEGLPGTDAWW---CAGRDPA 1360 Query: 1431 NVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE--- 1487 +WG PA +P R AG+ V +G +L L GG ++ +L P+ Sbjct: 1361 ALWGL---GPAGEGLPLPRRAAGSYVAFAGSSPVLALEAGGGRL------STVLPPDAAA 1411 Query: 1488 -------VFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLRE 1525 + H LT +R P R + +N P ++P +LR+ Sbjct: 1412 LPEALAPLVHLLTRRVR--PEARVAVLTINGGPAGESPYVPVLRQ 1454 >UniRef50_D0LRM6 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRM6_HALO1 Length = 1573 Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust. Identities = 417/1229 (33%), Positives = 593/1229 (48%), Gaps = 146/1229 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF F PTA Q Q W A E L+ APTGSGKTLAAFL LDRL + Sbjct: 31 FHPVVASWFRARFGSPTAPQTQGWPRIAAGEDTLIAAPTGSGKTLAAFLACLDRLIQRS- 89 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R +T ILYISP+KAL D+ RNL+ PL + + G +R +RTGD Sbjct: 90 --LRSVLPERT-HILYISPLKALSNDIFRNLETPLAELGEAFAEAGLCLPPIRTAVRTGD 146 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER+K+ + PP ILITTPES YL+LTS++ R L VETVI+DE+HAVA KRGAHL Sbjct: 147 TPQSERAKMAKRPPHILITTPESFYLLLTSKSGRAALSAVETVIVDEIHAVARDKRGAHL 206 Query: 194 ALSLERLDALLHTSAQR----IGLSATVRSASDVAAFLGGD-RPVT-VVNPPAMRHPQIR 247 LSLERLD L+ + + R +GLSAT R +A +L G RP+ +V+ R I Sbjct: 207 GLSLERLDRLVRSESGRAPVRVGLSATQRPIELIAEYLSGRARPLPHIVDAGHARTLDIA 266 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 I + D++ ++AS GR + I++ + +H +T+VF N+R L E+ Sbjct: 267 IEI---TDDELGALAS----HEQMGR-------VYDRIVELIEQHHTTLVFVNTRRLVER 312 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L E RL +A HHGS+S+E R Sbjct: 313 VAHALEE----RLGEERVVA---------------------------HHGSMSREMRLAA 341 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 EQ LK G++ C VAT+SLELGID+G VDLV+Q+ +P S+A+ LQRIGR+GH G+ KG Sbjct: 342 EQKLKFGQVACAVATASLELGIDVGPVDLVVQLGSPRSIATMLQRIGRSGHSRRGLPKGR 401 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F TR LV+ A +V + L+ + P +P D+LAQQ VAAAA + L+ DE ++ V Sbjct: 402 LFALTRDQLVECAALVRAVCKHNLDAIEPRMSPFDILAQQIVAAAACEDLEQDELFALVS 461 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 A +++L R FD L MLS S + W+R G + AR GA+L A+TSGG Sbjct: 462 GAFHYRELAREDFDKILLMLSEGV-SDRRGRATAHIHWDRIGGRIKARRGARLAALTSGG 520 Query: 548 TIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 IPD Y V+L PE R+GE+DE+ ES D+ LG WRI+++ +V+ Sbjct: 521 AIPDNANYQVVLYPE------ELRIGEVDEDFAIESSPGDVFLLGNAPWRIRRVETGRVL 574 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL----------ADGAFFSGTIP--P 654 V A G +P W GE GR EL E +G + AD A + G + P Sbjct: 575 VEDARGAPPTVPHWVGEAPGRTIELSEEVGTLRDEVEARIAAGEAPADIAAWVGEVACMP 634 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 A E +A ++ E R A G +P +R L+ ER DE G ++++H+P G R++ W Sbjct: 635 RTAAEQLVAYLR----EARGALGTLPTTRRLIAERFFDEGGGMQLVIHAPLGGRINRAWG 690 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF-EPEKLLQIVREAVGSS 773 +A+ R + + A+DDGIV + P +F F + +I+ +A+ + Sbjct: 691 LALRKRFCRSFDFELQAAATDDGIVISLGQPH-SFPLETVFQFLSSVSVEEILVQALLDA 749 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYP 819 +F R+R A R+L + R + R+RA+ LL + + P Sbjct: 750 PMFEIRWRWNATRSLTVLRRYGAKKVAPHILRMRANDLLSVVFPQQQACLENIPGDREIP 809 Query: 820 DFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFM 879 D P++ ET+R+CL + D+ L +L+ + G I++ T +PSP L+ F+ Sbjct: 810 DHPLVAETVRDCLTEAMDIERLRQLIADIENGRIEVLGRDTVSPSPLCHELIMANPYAFL 869 Query: 880 YQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEE 939 +DA RR +SL R+L Q D LD IR+ EEE + P R E Sbjct: 870 DDADA--ENRRTRAVSLR----RSLPDQGD-ATALDESAIRRAEEEAR---PSVRDLDE- 918 Query: 940 GLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAAR 999 L D L L + E L GSS A ++ L++ R + R AA Sbjct: 919 -LHDALLSL-VLVPEPLGLSLAGSSALSAPLMDRLISDGRATRLRYDSRGRECVAWVAAE 976 Query: 1000 LRDALGVRLPES--LPEI----YLHRVSYPLRDLFLRYLRAH----ALVTAEQLAHEFSL 1049 +PE+ LP + + V P ++ +R +RAH + +LA E L Sbjct: 977 RLPVARAAVPEAEELPALPPLPFAVEVPAP-EEVDVRIVRAHLDYSGPRSGRRLADELGL 1035 Query: 1050 GIAIVEEQLQQLREQGLVM----------NLQQDI---WVSDEVFRRLRLRSLQAAREAT 1096 A V L G ++ + D+ W + + R+ +L R Sbjct: 1036 PGARVLAACYALENDGAILRGSFTPGLSGKPEDDLDIEWCNRRILARIHRLTLARLRSEI 1095 Query: 1097 RPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLW 1156 PV+A R L Q V G DG++ V+EQL G A W Sbjct: 1096 EPVSAAALMRFLFRWQRV-------------NHENRLIGEDGLLTVLEQLQGFETAAGAW 1142 Query: 1157 ESQILPARVRDYSSEMLDELLATGAVIWS 1185 E ++LPAR+ Y LD L +G V W Sbjct: 1143 ERELLPARLHGYQPAWLDALCLSGQVAWC 1171 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/256 (27%), Positives = 110/256 (42%), Gaps = 56/256 (21%) Query: 1224 QAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 +A+ A LA GA F ++ + G + +++ LW L G+ T+D +A LR L Sbjct: 1281 RAVYAHLASAGASFLAELVR------GTGLAPEQVEDGLWQLAQAGLATADGFAGLRVLV 1334 Query: 1284 ---------------RSSSNART------------STRRSHRARRGRPVYAQPVSPRVSY 1316 R S + +T + R++ + R RP +A Sbjct: 1335 DRAAGESRSLFDEVGRRSQDRKTGPRGAGSSAWQRAVRKARQRERQRPAHA-------VR 1387 Query: 1317 NTPNLAGRWSLL------QVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSM 1370 + P AGRWSLL QV+P A+A +L RYG+I R ++ E+ + + Sbjct: 1388 SLPTAAGRWSLLGPPDPAQVDPE-------AVALQLLQRYGVIFRDLLVRESNLPPWREV 1440 Query: 1371 QTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPA 1430 R +E G + GRFV G G QFA +D LR + +A +T ++A DP Sbjct: 1441 LICLRRLEARGEVRGGRFVSGFVGEQFALPEAVDGLRSM-RRAPAIDEFT--LITATDPL 1497 Query: 1431 NVWGNLLPWPAHPATL 1446 N+ G P PA + Sbjct: 1498 NLVGITSAGPKTPAVM 1513 >UniRef50_Q4K580 Lhr n=14 Tax=Proteobacteria RepID=Q4K580_PSEF5 Length = 1474 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 330/912 (36%), Positives = 479/912 (52%), Gaps = 98/912 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F PA WF F T Q + W + A+ L+ APTGSGKTL AFL +D L R+ Sbjct: 58 DGFHPAVSAWFKHTFAAVTPAQARAWPLIAQRRSTLIAAPTGSGKTLTAFLAVIDDLVRQ 117 Query: 73 G---GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 G G +A + ++Y+SP+KAL D+Q NLQ PL GI ++ RR G E+++ Sbjct: 118 GLAGGGQLPDA-----TLVVYVSPLKALSNDIQINLQQPLAGITEQLRRMGLPELSISTA 172 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSK 188 +RTGDTP ++R+ + ++ P IL+TTPESLY++L S + R L +VIIDE+HA+AGSK Sbjct: 173 VRTGDTPQKDRNAMRKSAPQILVTTPESLYVLLGSDSGRRMLASTRSVIIDEIHALAGSK 232 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIR 247 RG+HLALSLERL AL RIGLSAT + V+ FL G RP +V+ R + Sbjct: 233 RGSHLALSLERLQALCAAPLLRIGLSATQKPIEAVSRFLVGHGRPCEIVDIGHARPRDLD 292 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 I VP + V + +W + + + HR+T++F N+R LAE+ Sbjct: 293 IEVPPVPLSAVMA--------------NDVWELVYERLANLAREHRTTLIFVNTRRLAER 338 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L L+E RL + A HHGS++KEQR Sbjct: 339 LARHLSE----RLGKQAVAA---------------------------HHGSLAKEQRLEA 367 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 EQ LK+G+L+ ++AT+SLELGID+G VDLV Q+ +P S+++ LQR+GR+GHQVGG KG Sbjct: 368 EQRLKAGDLQVLIATASLELGIDIGDVDLVCQIGSPRSISAFLQRVGRSGHQVGGTPKGR 427 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F TR DL++ A +++C+ G L+ L PH PLDVLAQQ VA + +R Sbjct: 428 LFALTRDDLIECAALLDCVRRGELDTLLIPHAPLDVLAQQIVAEVSCQEWSEAALLDMLR 487 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYP--SGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 +AAP+ DL + + A L ML+ + G SA+ + R L R GAQL A+TS Sbjct: 488 QAAPYADLDQAHYQALLQMLAEGFNGRQGLRSAYLHRDALAR---TLRGRRGAQLTALTS 544 Query: 546 GGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 GGTIPD YSVLL P+G +G ++E+ ES D+ LG TS+RI ++ + Sbjct: 545 GGTIPDNADYSVLLEPQG------LNIGSVNEDFAVESIAGDVFQLGNTSYRILRVETGK 598 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP-------PWLA 657 V V A G+ +PFW GE GR AEL + L L + G P WL Sbjct: 599 VRVEDAQGQPPNIPFWLGEAPGRSAELSSAVARLLAQLDE---LLGATPGQLQAAIHWLH 655 Query: 658 EE--NTIANIQGLIE---EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 E +A+ + L++ R A G +P L++ER DE G ++++HSP+G R++ Sbjct: 656 HELGLNLASAEQLVDYLAPARLALGALPSQDTLIMERFFDESGGTQLVIHSPFGSRINRA 715 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 W +A+ R + + AS+D IV + + D I+ +A+ Sbjct: 716 WGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFALDEVWRYLHSNSAEHILVQALLD 775 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL------EIA--------QGY 818 + LF R+R A AL +P + G + P QR+++ L+ +IA + Sbjct: 776 APLFGVRWRWNAGVALALPRYSGGRKVPPQIQRMKSEDLIASVFPDQIACLENLAGEREI 835 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 PD P++ +TL +CL + D L+RR+ G++++ PSP A +L + Sbjct: 836 PDHPLVEQTLDDCLHEAMDSEGWLNLLRRMEQGQVRLLSRELPAPSPLAAEIL--SAKPY 893 Query: 879 MYQSDAPLAERR 890 + DAPL ERR Sbjct: 894 TFLDDAPLEERR 905 >UniRef50_Q1IK30 DEAD/DEAH box helicase-like n=3 Tax=Bacteria RepID=Q1IK30_ACIBL Length = 1435 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 345/961 (35%), Positives = 502/961 (52%), Gaps = 116/961 (12%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 P ++WF++ F PT Q W L+ APTGSGKTLAAFL +D+L R+ Sbjct: 14 PLVQEWFVQKFGTPTEPQVAGWPQILAGRTTLIAAPTGSGKTLAAFLACIDQLVRKA--- 70 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 R + ++YISP+KALG D+Q+NL++PL I RG +R +RTGDT Sbjct: 71 -LNGELRDCTEVVYISPLKALGNDIQKNLEVPLGEIMQMAGERGILLPQIRTAVRTGDTL 129 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLAL 195 A ER K+ R PP IL+TTPESLY++LT+ R+R+ LR V TVI+DE+HAVA KRGAHL + Sbjct: 130 ASERIKMLRLPPHILVTTPESLYILLTADRSRQNLRHVRTVIVDEIHAVADDKRGAHLTI 189 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRP-VTVVNPPAMRHPQIRIVVPVA 253 SLERLD L T RIGLSAT + +A FL G RP +V+ R I I VP Sbjct: 190 SLERLDKLAITPPTRIGLSATQKPIEQIAHFLTGSGRPDPAIVDVGHRRQLDIAIEVPNT 249 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + V+S +W I + D V +HRSTI+F N+R L+E+L L Sbjct: 250 ELGPVAS--------------NEMWDEIYQRLADLVNQHRSTIIFVNTRRLSERLCLHLA 295 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E+ E A HHGS+S++ R E LK+ Sbjct: 296 EILG----------------EENVAA---------------HHGSLSRKLRHAAETKLKN 324 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GE++ +VAT+SLELGID+G VDLV Q+++P S+A LQRIGRAGH G + KG F TR Sbjct: 325 GEVKALVATASLELGIDVGFVDLVCQISSPRSIAVALQRIGRAGHWRGAIPKGRIFATTR 384 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +LV+ A + + G L+ + P PLD+LAQQ VAA + + DE + VRRA P++ Sbjct: 385 DELVECAAGIRAIHQGDLDRIIIPEAPLDILAQQIVAACSAEECDEDEMFDLVRRAYPYR 444 Query: 494 DLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 DL R+ ++ L MLS + G + A+ NR+ A+L A+TSGG IP+ Sbjct: 445 DLDRKQYEEILAMLSEGIAAKRGRYGAYIHHDRVNRKLRARRG---ARLAAITSGGAIPE 501 Query: 552 RGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD--QVIVT 608 +++V+L PEG VG +DE+ ES +I LG TSW+I++I + +++V Sbjct: 502 TALFTVVLEPEGVV------VGTVDEDFAVESMAGEIFLLGNTSWKIRRIEGNVGRILVE 555 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----------------DGAFFSGTI 652 A G+ +PFWRGE R AEL + + + L++ + G Sbjct: 556 DAHGQPPGVPFWRGEAPARTAELSQHVSELRRLVSEMTPTTKPLHKEEVAGESRRIRGIT 615 Query: 653 PP--------WLAEENTIAN--IQGLIEE---QRNATGIVPGSRHLVLERCRDEIGDWRI 699 P WL E + + +IE R G VP + ++ ER DE G ++ Sbjct: 616 PTAEVTQAIEWLQRECGVCQSGAEQIIEHIVTGRAVLGDVPTQQTIIAERFFDEGGGMQL 675 Query: 700 ILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF-E 758 I+H+P+G R+++ W +A+ R + + A+DDG+ + + P + +F F + Sbjct: 676 IIHAPFGGRINKAWGLALRKRFCRSFNFELQAAATDDGLNIALAEQH-SFPLSDVFQFLQ 734 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL-----E 813 PE L +I+ +A +S +F R+R A R+L + G + P QR+R+ LL + Sbjct: 735 PETLPEILEQAALASPIFKTRWRWDANRSLALLRFQNGKKVPPQIQRIRSDDLLASVFPD 794 Query: 814 IAQGY---------PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPS 864 +A + PD P+I E +++ L + DL L +L+ L G ++ V T PS Sbjct: 795 VAACFENIEGDIKVPDHPLIKEVMKDTLHEAMDLDGLMQLVSNLRDGTVKTLAVDTPVPS 854 Query: 865 PFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEE 924 F+ +L F+ DAPL ERRA +S+ L ++L +V LD I+QV E Sbjct: 855 VFSHEILNANPYAFL--DDAPLEERRARAVSMRRVLPDSVLEEVG---RLDRAAIQQVCE 909 Query: 925 E 925 E Sbjct: 910 E 910 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 106/390 (27%), Positives = 161/390 (41%), Gaps = 63/390 (16%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ ++ R+A PV+ + R LL Q V T Sbjct: 1063 WCERRLLARIHRLTVATLRKAIEPVSQAQFMRWLLRWQHVAEGTQTF------------- 1109 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW---SGQKKLG 1191 G G++ V++QL G +PAS WE ++L RVR Y + LD L TGAV W S Sbjct: 1110 GERGLLEVVQQLQGFEIPASSWEREVLSRRVRQYDPQWLDALSLTGAVGWGRLSPHPATL 1169 Query: 1192 EDDGL------------VALHLQEYAAESFTPAEADQANR--SALQQAIVAVLADGGAWF 1237 ED + ++E A E +Q R S + + + +L GA F Sbjct: 1170 EDSSQGTRRIVPTSVAPITFFVREDADWMVPRREEEQLERVLSPIGKQVFDLLRKRGACF 1229 Query: 1238 AQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSH 1297 I + + E+ + LW LV G++T+D + LR+L + +RS Sbjct: 1230 FADIVRSVGCAKAEA------ETGLWELVAAGLVTADGFDNLRSLIDPKRRSGPGGQRSA 1283 Query: 1298 RARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDT---ERMLALAENMLDRYGIIS 1354 R R + +GRW +L PL+ + + A+ +L RYG++ Sbjct: 1284 RPR-------------------HTSGRWCVLH--PLDSVAPEKSVEAVCRMLLRRYGVVF 1322 Query: 1355 RQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQAT 1414 R + E+ + +Q R +ED G I GRFV G G QFA ++ LR L Sbjct: 1323 RDLLTRESNLPRWRELQIAFRRLEDRGEIRGGRFVAGFLGEQFALPQAVESLRALRNLPA 1382 Query: 1415 QTRHYTPVALSANDPANVWGNLLPWPAHPA 1444 T +SA DP N+ G ++P PA Sbjct: 1383 NGETVT---VSAADPLNLVGIIVPGERIPA 1409 >UniRef50_A7H7C5 DEAD/H associated domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H7C5_ANADF Length = 1475 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 351/917 (38%), Positives = 483/917 (52%), Gaps = 110/917 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P RDWF+R F T Q W LV APTGSGKTLAAFL+A+D L +E Sbjct: 3 DAFHPVVRDWFVRRFGDATEPQTPAWREIGARRDVLVSAPTGSGKTLAAFLHAIDALLKE 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G +R++Y+SP++ALG D+ +NLQ PL I G LRV +RT Sbjct: 63 G----LAGELGDRTRVVYVSPLRALGNDISKNLQAPLAEIRAAAHAAGLALPELRVAVRT 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDTPA R KL PP IL+TTPESLYL+LT R +L VETVI+DE+HA+AG KRGA Sbjct: 119 GDTPAAARRKLLLRPPHILVTTPESLYLLLTCDSGRASLGDVETVIVDEIHALAGDKRGA 178 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV--------TVVNPPAMRH 243 HLALSLERL+AL QRIGLSATV +++A FL G V +V R Sbjct: 179 HLALSLERLEALARRRPQRIGLSATVDPVAEMARFLVGAERVDRRGNARCAIVEVGRRRR 238 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 + I VP D++SSVAS +W + + + HRST+VF +R Sbjct: 239 FDVAIEVP---RDELSSVASK-----------ELWAESYDRVAELIRAHRSTLVFVGTRR 284 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 LAE+ AAH A + R+ V +HHGS+S+E+ Sbjct: 285 LAER----------------------AAH------ALAERLGDGAVA---AHHGSLSRER 313 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R TE+ LK+G LR VVAT+SLELGID+G VD+V+Q+ +P ++++G+QRIGRA H GG Sbjct: 314 RLATEERLKAGALRAVVATASLELGIDVGEVDVVVQLGSPGAISTGVQRIGRAAHVRGGT 373 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 KG FP +R +LV+ A V + RLE + P PLDVLAQQ VA A ++ D Y Sbjct: 374 PKGRLFPMSRDELVECAAFVRGLRRARLEPVAPRDAPLDVLAQQLVAEATCGSIHEDRLY 433 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE--TGILTARPGAQLL 541 + RRA P++ LPR FDA ++ML+ + + R + +R+ G + AR GA++ Sbjct: 434 ALARRAWPYRALPRADFDAVVEMLAEGIAT---TPGRTTALLHRDGVNGRVKARRGARIA 490 Query: 542 AVTSGGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 A+T GGTIPD Y+V+ PEG +G++DE+ ES D+ LG TSW I+++ Sbjct: 491 ALTGGGTIPDTAQYAVVAEPEGVT------IGQVDEDFAVESLAGDVFLLGTTSWMIRRV 544 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGR----PAELGEMIGDFLHLLADGAFFSGTIPP-- 654 V V A G +PFW E GR AE+ + + LAD PP Sbjct: 545 EAGIVRVEDAHGAPPGVPFWNAEAPGRSAALSAEVSALRAELEPRLAD--------PPAA 596 Query: 655 --WLAEENTI--ANIQGLIE---EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGR 707 WL E + A + +++ R A G +P LV ER DE G +++LH+P+G Sbjct: 597 IAWLVAEAALPEAGARQVVDYLAAGRAALGALPTQDTLVAERFFDEAGGMQLVLHAPFGA 656 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF-EPEKLLQIV 766 R + + +A+ R + + A+DDG++ + P IF + P L +++ Sbjct: 657 RTNRAFGLALRKRFCRTFDFELQAAATDDGVLLSL-GPQHAFPLETIFSYVTPATLDEVL 715 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL-----------EIA 815 +AV + +F R+R A RAL +P G R P R+RA LL + A Sbjct: 716 EQAVLQAPMFGVRWRWNATRALAIPRLFRGKRMPPPIARMRAEDLLAAVFPAQVACQDNA 775 Query: 816 QG----YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 G PD P++ ETLR+CL + D L L+ R+ GE+++ V T PSP + LL Sbjct: 776 PGGPLEVPDHPLVRETLRDCLTEAMDAAGLRALLERIAAGEVRLLAVDTPEPSPLSHELL 835 Query: 872 FGYVAEFMYQSDAPLAE 888 + Y DAPL E Sbjct: 836 NAR--PWAYLDDAPLEE 850 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 131/461 (28%), Positives = 181/461 (39%), Gaps = 92/461 (19%) Query: 1039 TAEQLAHEFSLGIAIVEEQLQQLREQGLVM----------NLQQDIWVSDEVFRRLRLRS 1088 TA LA L + L +L +GLV+ + + W V R+ + Sbjct: 1054 TARDLAGRIGLPESAAASALLRLEAEGLVLRGTFLPDAPWSAEAPHWCERSVLARIHRLT 1113 Query: 1089 LQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAG 1148 L R PV+ + R L Q V P T G G+ V+ QL G Sbjct: 1114 LGRLRREIEPVSTAVFLRFLARWQHVAPGTR-------------LHGAHGLAEVLGQLQG 1160 Query: 1149 VGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGL------------ 1196 A WE +LPARV Y +LD +G V W DG Sbjct: 1161 FHAAAGAWERDLLPARVGGYEPALLDAACLSGEVAWGRLHVAPPQDGSPRRKGAPTRSAP 1220 Query: 1197 VALHLQE---YAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESV 1253 V L L+E + E+ P + + A+V VLA GA F +++ + GE+ Sbjct: 1221 VTLALREDLPWLLEAIAP---EPPPLGEIATALVEVLARRGASFLAELAPAVGAPPGET- 1276 Query: 1254 DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPR 1313 +EALW LV G++T D +A LRAL R RP A Sbjct: 1277 -----EEALWELVSAGLVTCDGFAGLRALIAPPPRGRVI----------RPGSA------ 1315 Query: 1314 VSYNTPNLAGRWSLLQ----VEPLNDTERMLA---------LAENMLDRYGIISRQAVIA 1360 GRW+LL+ +E E + LA L RYG++ R + Sbjct: 1316 --------GGRWALLRAPGAIERAASGESATSSVSQPTLDHLAHQYLRRYGVVFRDLLAR 1367 Query: 1361 ENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYT 1420 E P + + + RS+E G + GRFV G G QFA +D LR A + H Sbjct: 1368 EPRPPPWRDLVRVYRSLEARGELRGGRFVVGFSGEQFALPEAVDALR--AARRAGDGHAE 1425 Query: 1421 PVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGG 1461 + LSA+DP N+ G L P P PA VP G+ +V+ GG Sbjct: 1426 RLDLSASDPLNLAGILTPGPRIPA--VP----GSRLVLEGG 1460 >UniRef50_D2MKC9 DEAD/H associated domain protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKC9_9BACT Length = 1346 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 321/919 (34%), Positives = 478/919 (52%), Gaps = 83/919 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF + PT VQ +W EHAL+ APTGSGKTLAAFL ++D LF++ Sbjct: 19 FHPIIARWFRDSIGTPTDVQTASWPALCSGEHALIAAPTGSGKTLAAFLASIDSLFQQAL 78 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + H ++ILY+SP+KAL DVQ+NL+ PL I+ G +RV +RTGD Sbjct: 79 SNDLANH----TQILYVSPLKALSNDVQKNLRRPLSEISGNALEAGLLLPEIRVEVRTGD 134 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP + R + R PP ILITTPESL+L+LT+R +RE LR + TVI+DE+HA+AG+KRG+H+ Sbjct: 135 TPTKTRQDMLRRPPHILITTPESLFLLLTARKSREILRTIRTVIVDEIHALAGNKRGSHV 194 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERLDA+ H RIGLSAT + +A FL G + + P +V + Sbjct: 195 ALSLERLDAIAHVKPNRIGLSATQKPLEAIARFLTGGTSHISEDQAPIWTPTSCHLVDMG 254 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 ++ ++ A +IW + + + V HRST+VF N+R LAE++ +L Sbjct: 255 QRREMDLAIETPRDELGAIATNAIWADVYDRLTELVQTHRSTLVFVNTRRLAERIAHQLT 314 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 + L +HHGS+S++ R E+ LK Sbjct: 315 DRLGEDL-------------------------------VAAHHGSLSRKMRLWAEERLKK 343 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G+ R V+AT+SLELGID+G VDLV QV +P ++A+ LQR+GRAGH V + KG TR Sbjct: 344 GQTRVVIATASLELGIDIGFVDLVCQVGSPRAIATCLQRVGRAGHWVDAIPKGRLLCTTR 403 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +LV+ A ++ + G L+ + P +P D+LAQQ +A + VD Y + +A P++ Sbjct: 404 DELVECAALIRAIHLGHLDQILVPQDPKDILAQQLIAEVSAQEWPVDSLYQQYTQAYPYR 463 Query: 494 DLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 L R FD + +++ + S G A L +R L AR GA+L A+TSGG IPD Sbjct: 464 HLTRTAFDEVVTLVTQGWTSNRGKQQAL---LFHDRAQNRLRARRGARLAAITSGGAIPD 520 Query: 552 RGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 Y+V+ P+G VG +DE+ ES DII LG TSWRI+ + + V A Sbjct: 521 TATYAVIAEPQGNT------VGSVDEDFAVESLAGDIILLGNTSWRIRGVETGVMRVEDA 574 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE 670 G +PFWRGE R EL + + + + D + P + ++ +I E Sbjct: 575 HGAPPTIPFWRGEAPSRTFELSQEVAELRQAVVDRLTPPTSTSPATSGQDPHDHILRWFE 634 Query: 671 EQ----RNAT--------------GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 + R AT G VP R ++ ER DE G ++++HSP+G R++ Sbjct: 635 SECGADRRATEQILAYHQSGVHMLGAVPTQRTIIAERFFDEAGGMQLVIHSPFGGRINRA 694 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 W +A+ R + + A+D+G+V + + + L + +++ +AV Sbjct: 695 WGLALRKRFCVSFDFELQAAATDEGLVLSLGERHSFPLETVWSLLRSSNVREVLTQAVLQ 754 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QG 817 S +F AR+R +RAL + G R PL QR+RA LL Sbjct: 755 SPMFMARWRWNVSRALAVLRFRNGKRVPLHLQRMRAEDLLTAVFPMATACQDNRPPGNID 814 Query: 818 YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAE 877 P P++ ETLR+CL++ ++ L L++R+ G++ + + TPSPF+ +L Sbjct: 815 VPSHPLVQETLRDCLEEAMNIDGLTVLLQRIERGDVHCLSIESPTPSPFSHEILNANPYG 874 Query: 878 FMYQSDAPLAERRASVLSL 896 F+ DAPL ERR+ +S+ Sbjct: 875 FL--DDAPLEERRSRAVSM 891 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 13/110 (11%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ R++ R + V+A+ + R L Q V P Sbjct: 1102 WCDRRLLARIHRRTVLTLRREVQTVSASDFMRFLFRWQHVAPT-------------ARLH 1148 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW 1184 G G+ ++EQLAG AS WE +L +R+ DY + LD L G + W Sbjct: 1149 GEPGLRTILEQLAGFEAAASAWEPHLLRSRMADYRPDTLDYLCLRGIITW 1198 >UniRef50_A6CAB6 DEAD/DEAH box helicase-like protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAB6_9PLAN Length = 1532 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 320/942 (33%), Positives = 481/942 (51%), Gaps = 78/942 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE-- 72 + P WF + F+ PT Q Q W R EH L+ APTGSGKTL AFL +DRL + Sbjct: 6 YHPIIEKWFRKRFQGPTEPQQQGWPCINRGEHTLISAPTGSGKTLTAFLSVIDRLVKRSL 65 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G+ E + ++Y+SP++AL D+ RNL+ PL+ I+ GE +R+G+RT Sbjct: 66 AGDLDDE------TSVIYVSPLRALSNDMHRNLEQPLEEISQLLEEAGEIFTPIRIGLRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP+ +R+ L + PP IL+TTPESLYLMLT S+ARETL+ VETVI+DE+HA+ KRG+ Sbjct: 120 GDTPSSKRAALVKRPPHILVTTPESLYLMLTGSKARETLKTVETVIVDEIHALLRDKRGS 179 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVV--NPPAMRHP----Q 245 H +++LERL+AL+ QRIGLSAT + VA +L G RP + NPP+ Q Sbjct: 180 HWSITLERLEALVEHPLQRIGLSATQKPLDRVAQYLVGHRPEIEITANPPSKEQSEFPEQ 239 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 +V + + + + A W + I++ + HRST++F N+R LA Sbjct: 240 TCRIVNIGHSRTLDVAIQVPPSELSAICSHEQWAEVLEQIIELINSHRSTLIFVNTRRLA 299 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E++T +L E + SHHGS+S + R Sbjct: 300 ERITHQLTERLGEE-------------------------------VVGSHHGSLSAKIRH 328 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 TEQ LKSGEL+ V+AT+SLELGID+G +DLV+Q+ +P +A+ LQRIGR+GH +G V K Sbjct: 329 RTEQKLKSGELKAVIATASLELGIDVGYIDLVVQIGSPRGIATFLQRIGRSGHSLGLVPK 388 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 G F +R +LV+S +V + G L+ + P P+D+LAQQ A A DE + Sbjct: 389 GRIFALSRDELVESMALVRSIKQGILDTVRMPEAPIDILAQQITAEVACQEWNTDELFDT 448 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 + RA +++L R+ FD+T+ LS S + R L ++ + +R A+L++ + Sbjct: 449 LTRAYSYRNLKRKDFDSTIQFLSEGISSTSGRS-RVYLHHDQVQNRVRSRKNARLVSTMN 507 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 GG IP+ Y V+ E + GS +DEE ES DI LG TSW+++ + V Sbjct: 508 GGAIPEIASYRVVTEEDQTVVGS-----VDEEFAVESMAGDIFLLGNTSWQVRYVRGGDV 562 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI--- 662 V A G +PFW GE GR EL I L + WL++E Sbjct: 563 TVVDAHGAPPSIPFWFGEAPGRSLELSTEISHLRKELERRIEDTERAILWLSQETNTDEW 622 Query: 663 --ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 I + Q+ A G+VP + +V ER DE G ++++H+P+G ++ W + R Sbjct: 623 GSKQIVEYFQAQKAALGVVPTQKRIVFERFFDESGGMQLVIHAPFGGDINRAWGYTMRKR 682 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIF-LFEPEKLLQIVREAVGSSALFAAR 779 + + A D+GI+ + P ++F + + Q+ +A+ +F R Sbjct: 683 FCRSYNFELQATADDNGIILSL-GPQHSFPLESLFSMLNTRNVQQLSEQAILDHPMFHVR 741 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLL-------------EIAQGY-PDFPVIL 825 +R RALL+ G + P QR RA LL EI + PD ++ Sbjct: 742 WRWNVTRALLVSRMQNGKKVPPPLQRFRAEDLLTAVFPRLTGCPENEIGEIVRPDHILVD 801 Query: 826 ETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 +TL +CL + D+ L+ ++ ++ G +++ T PSPF LL F+ +A Sbjct: 802 QTLYDCLNEQLDIEGLKNVLLKIEQGSVKLIPRDTREPSPFCYELLNSSPYTFLDGGEA- 860 Query: 886 LAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQ 927 ERRA ++ L + V+ L P+ I QV +E Q Sbjct: 861 -QERRARAVATRHTL---SVESVEDLGRLSPEAIAQVCQEAQ 898 Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 131/473 (27%), Positives = 193/473 (40%), Gaps = 107/473 (22%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ +LQ R +PV + + L G+ T Sbjct: 1073 WCHRRLLSRIHRLTLQGLRAQVQPVDVSVLIQYLTRLHGL-------------TEDEKRS 1119 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW---------S 1185 G +G+ V+ L G+ +PA WE ILPAR+ +Y S LDEL TG V W + Sbjct: 1120 GTNGLFEVLSMLQGIDIPAICWERDILPARLSNYQSSHLDELCFTGEVGWGRLYPPRRTA 1179 Query: 1186 GQKK--------------LGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLA 1231 Q K L ED +A Q + + +EA+ + S+ Q + +L Sbjct: 1180 DQGKAMTSITRNAPVSFFLREDIPWLACFNQ--VSSNLEDSEAEH-HLSSPAQEVQELLT 1236 Query: 1232 DGGAWFA-------QQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT- 1283 GA FA Q + +I D +GE L+ +G++TSD ++ +R T Sbjct: 1237 QRGALFASDLMATTQSLPSQIADSLGE-------------LISRGLVTSDSFSGMRQFTE 1283 Query: 1284 -RSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSL--------LQVEPLN 1334 R S N R+S + R R +TPN GRWS+ ++ L Sbjct: 1284 DRISKNRRSSRKSRIGLVRKR-------------STPNNTGRWSIWRRESSEEVEERSLQ 1330 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAEN-IPGGFPSMQTLCRSMEDSGRIMRGRFVEGLG 1393 E + A ++ R+G++ R + E+ P F +Q + R +E G I GRFV G+ Sbjct: 1331 YFEYVEQWAWQLIRRWGVVFRDLLSKESGAPRWFELLQ-IYRRLEARGEIRGGRFVTGVA 1389 Query: 1394 GAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAG 1453 G QFA TI LR L A + T LSA DP N+ G L PAT PT R Sbjct: 1390 GEQFAMSGTIQELRKL-RDAPSSDELT--ILSATDPLNLTGILTKDARVPAT--PTNR-- 1442 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTL 1506 +A ++ W + EEL + ++ L+RE L F L Sbjct: 1443 -------------IAYRNGNLIAWAKNEELF---LLTKVSEKLKRELILGFGL 1479 >UniRef50_D2QY58 DEAD/H associated domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY58_9PLAN Length = 1510 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 339/972 (34%), Positives = 497/972 (51%), Gaps = 116/972 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+P R WF F QP+ Q W A H LV APTGSGKTLAAFL LD+L R Sbjct: 6 FTPLVRQWFTARFGQPSDPQTHGWPAIAAGRHTLVAAPTGSGKTLAAFLVCLDKLVRAWQ 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + T ++++++Y+SP+KAL D++RNLQ PL +++ +++G E+ +RV +RTGD Sbjct: 66 DGTLG----QSTQVVYLSPLKALSNDIERNLQQPLAELSELAKQQGLGELPIRVAVRTGD 121 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T +R + ++PP IL+TTPESLYL+LTS + R TL VETVI+DE+HA+A KRG+HL Sbjct: 122 TTQSDRQSMLKHPPHILVTTPESLYLLLTSVKGRGTLTEVETVIVDEIHALARDKRGSHL 181 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERL A QRIGLSAT R +A FL G V PPA+ P R P A Sbjct: 182 ALSLERLAAHTSKPLQRIGLSATQRPMDAIARFLVGR---GVPKPPAVAKPSRRKKKPAA 238 Query: 254 ----------------------NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 N+D SV + + A W + + + Sbjct: 239 QPLLEAQPYTPDVHIVDVGHVRNLDLAISVPTS---ELAAVCSNEQWEEVYAQLSSMIQS 295 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFI 351 HRST+VF N+R LAE+++ RL EL ++A Sbjct: 296 HRSTLVFVNTRRLAERVSHRLTELLGEE-----AVA------------------------ 326 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ 411 SHHGS+SK+ R EQ LK+G+LR +VAT+SLE+GID+G +DLV Q+ +P S+A+ LQ Sbjct: 327 --SHHGSLSKQIRLDAEQRLKAGKLRAIVATASLEMGIDIGYIDLVCQIGSPRSIATFLQ 384 Query: 412 RIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 R+GR+GH +G KG FP TR +L++ +V+ + G L+ + P PLD+LAQQ +A Sbjct: 385 RVGRSGHNLGATPKGRLFPLTRDELLECLALVQAVRRGDLDQIEIPEKPLDILAQQIIAM 444 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A + D+ ++ + RA P+ LPR FD LDM+S G S + ++ + Sbjct: 445 VAAEDWNEDDLFALITRAEPYHQLPRDEFDKILDMVSNGIKQGRLSG--GYVHRDQIHKM 502 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLG 591 L AR GA++ A+TSGG IP++G Y V++ EGE VG +DE+ +S + +I LG Sbjct: 503 LRARRGARIAAITSGGAIPEQGEYRVVV-EGE----GTFVGTVDEDFAIDSMIGNIFLLG 557 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA-------- 643 SW+I+QI +V+V G +P W GE GR EL + + H LA Sbjct: 558 NNSWQIRQIKPGEVVVADVHGAPPTIPHWFGEAPGRTIELSRQLSNLRHDLASQISDQLI 617 Query: 644 DGAFFSGTIPPWLAEENTIANIQ--------------GLIEEQRNATGIVPGSRHLVLER 689 D + + A E+ A++ I Q+ A G+VP +V ER Sbjct: 618 DIMSRAQSDGMQCAPEDLAADVMRRCGCDAWGAEQAIRYIAAQKAALGLVPTIDKIVFER 677 Query: 690 CRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 DE G ++++H+ G R++ W +A+ R + + A D+G++ I Sbjct: 678 FFDESGGMQLVIHAALGSRINRAWGLALRKRFCRSFDFELQAAADDNGVLLSIGPQHSFP 737 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 D+ + P +++ +AV + +F R+R A RAL + + G R P Q+ R+ Sbjct: 738 IDSLFGMLHPGNAQELLEQAVLAVPMFQIRWRWNATRALAVLRQQGGKRVPPHLQKFRSE 797 Query: 810 QL-----------LEIAQG---YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQI 855 L LE G PD P++ +T+ +CL + D+ ++ + G+I++ Sbjct: 798 DLLATTFPETVGCLENHHGDIVVPDHPLVKQTMHDCLTEAMDIVRWTSILADIKSGKIEL 857 Query: 856 SDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGEL-- 913 T PSPFA +L F+ DA L ERR +S R L D +L Sbjct: 858 VARDTREPSPFAHQMLNARPYAFL--DDAGLEERRTRAIS-----TRRSLSIDDYRDLTR 910 Query: 914 LDPQVIRQVEEE 925 LDP + QV E Sbjct: 911 LDPAALAQVTRE 922 Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 111/410 (27%), Positives = 172/410 (41%), Gaps = 59/410 (14%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ +L + V TY LL+ERQG+ G A + Sbjct: 1093 WCERRLLSRVHRLTLDGLKRRIEAVPPETYIELLIERQGL-----GQNA--------QRQ 1139 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G++GV + QLAG PA WE ++L ARV Y + LD L G +IW D Sbjct: 1140 GIEGVRETVLQLAGFESPAGAWEEKLLAARVAGYDPQWLDNLFLGGELIWGRLCPPSRDA 1199 Query: 1195 GLVALHLQEYAAESFTPAEADQ--ANRSALQQ---------AIVAVLADGGAWFAQQISQ 1243 A L + E +R Q ++ +L GA F ++ Q Sbjct: 1200 ASSAAALTRAMPLTILGREDRHWMIHREVTDQPPLVTSTAAEVLRILEMKGALFFGEL-Q 1258 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 R+ + + L+EAL L G+++ D +A +R L + N R ++R + +A Sbjct: 1259 RLTQLL-----TTKLEEALAELSAMGLVSCDTFAAVRHL--AGGNVRKNSR-TRKATSSG 1310 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWSLL--QVEPLNDTERMLALAENMLDRYGIISRQAVIAE 1361 P+ GRWSL +EP + LA +L RYG++ R + E Sbjct: 1311 PL-----------------GRWSLFPGALEPPAADDIALAWCRLLLRRYGVVFRDLLARE 1353 Query: 1362 NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP 1421 + + S+ + R +E G + GRF+ G+ G QFAE + RLRDL + T +T Sbjct: 1354 STAPNWGSIIRMFRRLELRGEVRGGRFIAGVAGEQFAEEAVVTRLRDL--RDNPTTDWT- 1410 Query: 1422 VALSANDPANVWGNLLPWPAHPA---TLVPTRRAGALVVVSGGKLLLYLA 1468 +SA DP N+ G + P PA + R A+ G++ + A Sbjct: 1411 -IISAIDPLNLSGLVTEGPRIPAIHKNAIVIHRGRAVAAKVSGRIEFFAA 1459 >UniRef50_D2LLH6 DEAD/H associated domain protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LLH6_9EURY Length = 1688 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 295/922 (31%), Positives = 469/922 (50%), Gaps = 101/922 (10%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF + + T Q + ++ LV +PTGSGKTL AF+ ++ LF Sbjct: 16 LFDPIIGEWFTSKYSELTEPQAYAIPLIHSGKNVLVSSPTGSGKTLTAFISIINELFLLA 75 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 E E +Y+SP+KAL D+ RNL++PL+ I D + +G +RV +R+G Sbjct: 76 KEGKLE----DKVYCVYVSPLKALANDIHRNLEVPLEEIKDLAKSKGVKIPKIRVAVRSG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 DT ER K+ R PP I ITTPESL L+LT+ + RE+ R V VI+DE+H +A +KRG Sbjct: 132 DTSTAERQKMLRKPPHIFITTPESLSLVLTAPKFRESFRDVRYVIVDEIHELANNKRGVM 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-----RPVTVVNPPAMRHPQIR 247 L+L+LERL L + QRIGLSAT ++A +L G R V++V + ++ Sbjct: 192 LSLNLERL-QYLAKNFQRIGLSATQAPIEEIAKYLVGYEGEEPRNVSIVEVEVRKKLDLK 250 Query: 248 IVVPVANMDDV-SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 ++ PV ++ V VA+ D ++D + RHR+T++FTN+R E Sbjct: 251 VITPVEDLTLVPYEVANEKMYDV---------------LVDIINRHRTTLIFTNTRSGTE 295 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + +L E L+ +HHGS+SKE R Sbjct: 296 HVAYKLKEKGIENLE--------------------------------AHHGSLSKETRLR 323 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E+ALK G+L+ V++++SLELGID+G +D+V+Q+ +P S+A GLQRIGR+GH G +KG Sbjct: 324 VEKALKEGKLKAVISSTSLELGIDIGYIDVVVQIGSPKSIAKGLQRIGRSGHAYGATAKG 383 Query: 427 LFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 F +L++ +V+C + G+++ + P N LDVL+Q V + VDE Y+ + Sbjct: 384 RFLVFDNDELIECTTLVKCAYDGKIDRVRIPKNSLDVLSQIIVGMSIEKRWNVDEAYNII 443 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 R + + +LP+ F L L G Y GD K+ ++ E + + ++++ + Sbjct: 444 RSSYCYHELPKEKFIQVLRYLGG-YVLGD--TVYSKIWFDEEDMVFGRKRSSRMIYFMNM 500 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 GTIPD Y V+ EG +R+G L E+ V + + D+ LGA S+ + I +V+ Sbjct: 501 GTIPDEADYLVIDHEG------KRLGSLSEKFVEKLQKGDVFVLGARSYEVLSIRTGKVV 554 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT-------IPPWLAEE 659 V A G+ +P W GE R +L +G F + G + + + Sbjct: 555 VKDATGKRPTVPSWVGEMLPRSFDLSVEVGKFREFVEKNIRERGEKKTIEILMKDYYLDY 614 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 +I I ++ IVP + +V+E D G II H P+GRRV++ + A A Sbjct: 615 RGARSIVSYI--KQGMHHIVPTHKRVVIEGYVDPAGKHNIIFHYPFGRRVNDALSRAYAF 672 Query: 720 RIHALWGADASVVASDDGIV------ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 +I +G + + +DD + R+ D L +++ +R A+ ++ Sbjct: 673 KITEKYGVNVGISITDDAFMLTLKRRIRLEDIKN--------LLSSDEIEDALRRAIFNT 724 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 LF RFR CA+R+ ++ R G + +Q+LR+ ++L + PDFPV+ ET E Sbjct: 725 ELFKQRFRHCASRSFMVLRRYKGRDISVARQQLRSDKILRLLSEIPDFPVMEETYNEIFN 784 Query: 834 DVYDLPALERLMRRLNGGEIQISDV-TTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 V DLP + ++R++ GEI++ V + TPS FA S++ + SD L E R++ Sbjct: 785 IVMDLPHAKEVLRKIENGEIEVKIVPYSDTPSIFAHSIILSGI------SDIVLMEDRSA 838 Query: 893 VLSLDSELLRNLLGQVDPGELL 914 +L EL LL +V P E L Sbjct: 839 LL---KELHMKLLERVIPKEEL 857 >UniRef50_A9GB61 Putative ATP-dependent helicase, N-terminal n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GB61_SORC5 Length = 1497 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 356/976 (36%), Positives = 481/976 (49%), Gaps = 129/976 (13%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P WF F P Q + W V A AL+ APTG+GKTLAAFL+ LDRL R+ Sbjct: 1 MFHPVVDRWFRDRFGAPAPAQERAWPVIAAGRDALISAPTGAGKTLAAFLFCLDRLVRDA 60 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R A + +T +LYISP+KAL DV RNL+ P+ I+ G +R +RTG Sbjct: 61 ---ARGALEDRTD-VLYISPLKALSHDVHRNLEQPIAEISAAMEAAGLPAPGIRALVRTG 116 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 D+PAQER + PP +L+TTPES +++LTS R L GV TVI+DEVHA+AG KRGAH Sbjct: 117 DSPAQERRAMAARPPHVLVTTPESAFILLTSASGRRALSGVRTVILDEVHAIAGDKRGAH 176 Query: 193 LALSLERLDALLHTSA----QRIGLSATVRSASDVAAFLGGDRPV-TVVNPPAMRHPQIR 247 LALSLERL+ L+ + QR+GLSATVR A + G R + +V+ R + Sbjct: 177 LALSLERLEDLVISQGGARPQRVGLSATVRPIEIAARLVAGARELPQIVDVGQRRDLDLA 236 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 I VP D++ +V + H W I I RST+VF N+R L E+ Sbjct: 237 IEVP---RDELGAVCT------H-----EQWTEIYDRIAALAEGARSTLVFVNTRRLVER 282 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L ARL DV A HHGS+S+ +R Sbjct: 283 VAHALG----ARL-------------------------GEDVVAA--HHGSLSRARRLSA 311 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK+GELR VVAT+SLELGID+GAVDL V +P S+ LQRIGR+GH + +G Sbjct: 312 ERRLKAGELRVVVATASLELGIDVGAVDLACLVGSPRSINVALQRIGRSGHALAATPRGR 371 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 FP TR LV+ A IV G L+ +T PLDVLAQQ +AA A + + Y+ VR Sbjct: 372 LFPLTRDQLVECAAIVRAARRGELDRMTSREGPLDVLAQQIIAACACEERDQEGLYALVR 431 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG---------- 537 RAAP++ L RR FDA + M+SG + D A + R G L R Sbjct: 432 RAAPYEGLSRRDFDAVVAMVSGGAAAADDGASAARGARQR-AGSLVYRDAIGGRLRGRRG 490 Query: 538 AQLLAVTSGGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWR 596 A+L A+TSGG IPD V+L P+G +VG LDE+ ES D+ LG TSWR Sbjct: 491 ARLAALTSGGAIPDIAAVDVVLQPDGT------KVGTLDEDFAIESSGGDVFLLGNTSWR 544 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAEL--------GEMIGDFLHLLADGA-- 646 + ++ Q+ V A G + +PFW GE R EL E+ ADGA Sbjct: 545 VLRLEGGQMWVEDAHGAAPTVPFWLGEAPARTPELSAEVAALRAEVAARLDEERADGARP 604 Query: 647 ------------FFSGTIPPWLAEENTIAN-----IQGLIEEQRNATGIVPGSRHLVLER 689 WL E + ++ IE R A G VP +V+ER Sbjct: 605 AAERGQGGEEARAARSRAARWLMEACALDARGALLVRDYIEAGRAALGAVPDGATVVVER 664 Query: 690 CRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 DE G +I++H+P G RV+ +A+ R + + A+DDG++ + G Sbjct: 665 FFDEAGGQQIVVHTPLGGRVNRALGLALRKRFCRSFDFELQAAATDDGVLLSLSAEHGIP 724 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 D + L PE L +++ +A +F RFR A+RAL + G R P QR+RA Sbjct: 725 IDEVLDLVRPEGLEEVLVQAALQGPMFRTRFRWAASRALALLRFRGGRRVPPALQRMRAD 784 Query: 810 QLL----EIAQGY------------PDFPVILETLRECLQDVYDLPALERLMRRLNGGEI 853 LL QG PD P++ E LR+CL ++ D+ L L+ L G I Sbjct: 785 DLLLSIFPEQQGCQDNHGLFAHVEPPDHPLVREALRDCLTELMDVEGLRALLVGLRSGAI 844 Query: 854 QISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL----AERRASVLSLDSELLRNLLGQVD 909 ++ + T PS F+ +L + + DAPL A L +E+ L G Sbjct: 845 RVVALDTPEPSVFSHEIL--NANPYAFLDDAPLEERRARAVRVRRGLPAEVAERLGG--- 899 Query: 910 PGELLDPQVIRQVEEE 925 LDPQV+ +V E Sbjct: 900 ----LDPQVVAEVVAE 911 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 112/392 (28%), Positives = 161/392 (41%), Gaps = 52/392 (13%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ R++ R+A P A R LL QGV P T + PG Sbjct: 1103 WCDRHLLARIHRRTVTGLRKAIEPATAAELLRFLLAWQGVRPGTQ-------ARGPG--- 1152 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G+ RVIEQL G L A WE +LPARV Y +LD L +G V W + + D Sbjct: 1153 ---GLGRVIEQLQGFELAAGAWEQAVLPARVAGYDEGLLDALCLSGEVAWG--RVVPRDA 1207 Query: 1195 GL------VALHLQEYAAESFTPAEAD----QANRSALQQAIVAVLADGGAWFAQQISQR 1244 + L L+ P EA+ A+ S Q +++ L GA F ++ Sbjct: 1208 AAPTRAAPITLALRRDLPWLLAPREAEGAPPPASLSEAAQGVLSFLTRAGASFFDDLAVG 1267 Query: 1245 IRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRP 1304 + G ++EALW LV G++T D +A LR+L + R Sbjct: 1268 VGGVGGAGRSRDEVEEALWELVAAGLVTGDGFAALRSLLGGGAAVALGAGRLRGG----- 1322 Query: 1305 VYAQPVSPRVSYNTPNLAGRWSLLQVEP----------LNDTERMLALAENMLDRYGIIS 1354 P +GRWSLL+ P + + ALA L RYG++ Sbjct: 1323 ---------ARRGGPVASGRWSLLRSRPDAFAPAAGEDAEGPDVVEALAHQYLRRYGVVC 1373 Query: 1355 RQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQAT 1414 R+ + E P + + + R +E +G++ G V G G FA +D LR + + Sbjct: 1374 RELLAREPRPPAWRDLLRVYRRLEMAGQLRGGHLVAGFVGEHFALPEALDALRAVRREPL 1433 Query: 1415 QTRHYTPVALSANDPANVWGNLLPWPAHPATL 1446 V LSA DP N+ G + P P PA L Sbjct: 1434 SGEI---VQLSACDPLNLVGIVTPGPRVPAAL 1462 >UniRef50_C7DIU9 DEAD/H associated domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIU9_9EURY Length = 898 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 300/938 (31%), Positives = 465/938 (49%), Gaps = 108/938 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 V + TR WFL FK+ T Q ++ + A ++ L+ APTGSGKT++AF+ + LF + Sbjct: 17 VLNTYTRKWFLENFKELTPPQKFSFKLIAEKKNVLITAPTGSGKTMSAFVSVISALFDKA 76 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV---NLR--- 127 + E T +YISP+KAL D+ RNL PL I + ++ ++ N+R Sbjct: 77 LKGELE----DTVYCIYISPLKALNNDIYRNLVKPLTEIYETIKKEKGVDLIKENIREVT 132 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAG 186 +G+RTGDT ER K PP+IL+TTPESL +++ S R E L+ VE +IIDE+H +A Sbjct: 133 IGVRTGDTLQSERRKQLIKPPNILVTTPESLAILINSERYVENLKHVEYIIIDELHELAN 192 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVVNPPAM 241 +KRG HL+LS+ERL L+ + RIGL AT+ + A FL G R TVV+ Sbjct: 193 NKRGVHLSLSVERLQELIGHNLIRIGLGATLYPLEEAAKFLVGYDNGAPRDCTVVDASWS 252 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 + +I+++ PV +M +V A E S++ I I +ST++FTN+ Sbjct: 253 KSIEIKVMSPVVDMINVQENAI----------EDSMYKMINGAIGAS----KSTLIFTNT 298 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R E++ L + R S +IA +HHGS+S+ Sbjct: 299 RSGTERVVFNLKK----RFGYSDTIA--------------------------AHHGSLSR 328 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 E R E+ LK G L+C V+++SLELGID+G +DLVIQ+ +P SV +QRIGRAGH Sbjct: 329 ESRLEVEELLKKGALKCAVSSTSLELGIDIGTIDLVIQLGSPKSVTRSVQRIGRAGHSYK 388 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 +KG R DLV+ ++ + L++ + P N LDVL+Q V + DE Sbjct: 389 STAKGDVIVLNRDDLVECTIMADAALKKHLDSFSTPQNALDVLSQHIVGMSITRKWNADE 448 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG--AQ 539 Y+ V+RA P+ +L F + + LSG Y + K +W E + R G A+ Sbjct: 449 AYALVKRAYPYHNLEEGDFYSIIKYLSGSYVDLESRRVYGK-IWYDEKENMFGRRGKYAK 507 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR-VGELDEEMVYESRVNDIITLGATSWRIQ 598 L+ + + GTIPD +V L AG+ + +G ++EE + + DI TLG ++ Sbjct: 508 LIYMLNLGTIPDEVAINVFL------AGTNKWIGNIEEEFLARMKPGDIFTLGGRLYKFS 561 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLH------------------ 640 + V A S +P W E ELG IG F Sbjct: 562 HAKGTKCYVEEAKSASPTIPPWFSEQLPLSYELGIAIGKFRKEMSGMIREEIDRRHKKGA 621 Query: 641 LLADGAFFSGTIPP----WLA----EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRD 692 L G G+IP +L+ ++N + I EQ G+VP + +++E D Sbjct: 622 LSGSGMLRKGSIPKRIDSYLSKLPIDKNAKSAIYAYFAEQELFCGLVPNNELILVEYTSD 681 Query: 693 EIGDWR-IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPD 751 + D ++ HS +GRRV++ + A A + + D S++ +D+G V + Sbjct: 682 NLKDSSYLVFHSLFGRRVNDALSRAFAVKFGKMTDEDISIMVNDNGFVLFVDHAMSMSER 741 Query: 752 AAIFLFE---PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA 808 LFE L ++++E + + L RFR AAR+ ++ G + P+ +Q++ A Sbjct: 742 KVKKLFEEVLSSDLSKLLKENIRKTELMKRRFRHVAARSFMILKNYKGWKQPIGRQQVNA 801 Query: 809 SQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFA 867 LL A+ PDFP+I ET RE D+ D+ ++ RL G+I+ ++T +PSPFA Sbjct: 802 QLLLNAAEEIDPDFPIIRETYREIFGDLMDINRANEVLSRLKDGKIKYQFISTDSPSPFA 861 Query: 868 TSLL-FGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 S+L FG+ M + ER+ + L +L+ + Sbjct: 862 HSMLTFGHADVVM------MKERQQYLKYLHKMVLKKI 893 >UniRef50_Q6L0N7 ATP-dependent helicase n=1 Tax=Picrophilus torridus RepID=Q6L0N7_PICTO Length = 1667 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 290/906 (32%), Positives = 457/906 (50%), Gaps = 94/906 (10%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHV--AARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P +WF K + +PQ + + + LV +PTG+GKTL FL ++ LF + Sbjct: 16 PVVAEWF--NSKYDSLSEPQRYGIPLIHNKNNVLVSSPTGTGKTLTGFLSIINELFIKA- 72 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R +YISP+KAL DV +NL+ PL I + R G ++R+ +R+GD Sbjct: 73 ---RSGSLEDKIYCVYISPLKALANDVNKNLKTPLNEIYEIARSHGIDLPDIRIAVRSGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A+ER+++ PP ILITTPESL L+LT ++ RE GVE VI+DE+H ++ +KRG+ L Sbjct: 130 TDARERARMLSKPPHILITTPESLSLVLTANKFREKFFGVEYVIVDEIHEISSTKRGSLL 189 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRI 248 +L+LERL A + + RIGLSAT +AA+L G R ++ ++ +R+ Sbjct: 190 SLNLERL-AYIAGNFVRIGLSATQAPLDLIAAYLCGYDGEKRRECRIIEVNTNKYLDLRV 248 Query: 249 VVPVANMDDVS-SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + P ++ VS +A+ D I+D V H++T++FTN+RG E Sbjct: 249 ITPSKDLTKVSYEIATEKMYDI---------------IVDLVNSHKTTLIFTNTRGSTEH 293 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + RL A E+ +HH S+ KE R Sbjct: 294 VAMRLK----------------ARGIENI----------------EAHHSSLGKETRVDV 321 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E LK GEL+CV+ ++SLELGID+G +DLVIQ+ +P SV+ LQRIGR+GH V SKG Sbjct: 322 ENKLKRGELKCVITSTSLELGIDIGYIDLVIQIGSPKSVSRALQRIGRSGHGVRDFSKGR 381 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 DL++ V+ + ++ + P NPLDVL+Q V A VDE Y ++ Sbjct: 382 LVVFDIDDLMECTVLTRAAYDHNIDKVQVPLNPLDVLSQALVGMALEKTWNVDEAYKIIK 441 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + + L R F TL LSG+ + K+ ++ ET + +L+ + G Sbjct: 442 NSFSFHTLDYRDFIYTLKYLSGKIEG---NTIYSKIWYDEETSTFGKKRSTRLIYFMNVG 498 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPD Y+V G R +G+L ++ V + R DI LGA +++ + R++V+V Sbjct: 499 TIPDEANYNVFNDHG------RMIGQLSDKFVEKLRQGDIFVLGARTYKFIKTVRNRVMV 552 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI----- 662 + A G + +P W GE R +LG +IG F LA + + WL + I Sbjct: 553 SDATGMTPTVPSWTGELLPRSYDLGVLIGRFRKELA--SMDDNSAKEWLMKNYYIDEFGA 610 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 ++ I+ Q+ GI P L++E D+ ++ II H P GRRV++ + A A I Sbjct: 611 MSLVSYIKAQK-PYGI-PSEDFLLIEGYMDK--NYNIIFHIPLGRRVNDALSRAYAYIIS 666 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 + +A + +D+G + D ++ D I + I++ ++ ++ +F RFR Sbjct: 667 NNYDVNARISVNDNGFMISF-DKRIEIKD-VIRMLTSRNFDDILKRSIENTEMFKQRFRY 724 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP-AL 841 CA RAL++ + P+ +Q+LR+ +LL + + +FPVI ET E L DV D+ AL Sbjct: 725 CATRALMVLRKYKSADVPVTRQQLRSDKLLRVLENMDNFPVIKETYNEILNDVMDMEHAL 784 Query: 842 ERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL-SLDSEL 900 + + G +I+D + T SPF+ +L+ SD L E ++ +L ++L Sbjct: 785 LYIKNVIEKGRFKINDYSRET-SPFSYNLIISGA------SDVVLMEDKSKLLREFQNKL 837 Query: 901 LRNLLG 906 L + G Sbjct: 838 LDKIYG 843 >UniRef50_B1FTZ8 DEAD/H associated domain protein n=2 Tax=Burkholderia RepID=B1FTZ8_9BURK Length = 1553 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 265/644 (41%), Positives = 360/644 (55%), Gaps = 73/644 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA WFL+ F PT Q W R LV APTGSGKTL AFL ALD L ++G Sbjct: 29 FHPAVAGWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQGL 88 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP+KAL D++ NLQIPL+GIA E RG +++R +RTGD Sbjct: 89 AN--HGALPDETLVVYVSPLKALSNDIRLNLQIPLQGIAAELDARGLPPLDIRTAVRTGD 146 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 T QER+ L + P IL+TTPESLY++L S + R L V TVI+DE+HA+AGSKRG+HL Sbjct: 147 TTQQERNALRKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGSKRGSHL 206 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG------DRP--VTVVNPPAMRHPQ 245 ALSLERLDAL RIGLSAT + S VA FL G D P +++ +R Sbjct: 207 ALSLERLDALCGRRLPRIGLSATQKPVSAVARFLVGGASIDSDVPADCAIIDVGHIRARD 266 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + + +P ++ V +W + + + V HR+T++F N+R +A Sbjct: 267 LALEIPPVPLEAVMP--------------NEVWERVYDRLAELVALHRTTLIFVNTRRMA 312 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E+ L E RL + A HHGS++KE R Sbjct: 313 ERAARHLTE----RLGKEAVAA---------------------------HHGSLAKEHRF 341 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 EQ LK GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GHQVGG+ K Sbjct: 342 DAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHQVGGMPK 401 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 G FP +R DL++ A +++C+ G L+ L P PLDVLAQQ VA + D + Sbjct: 402 GRLFPTSRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWSEDALFDL 461 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAV 543 +RRAAP+ +L R +DA L ML+ Y S G +A+ + V +G L R G +L+AV Sbjct: 462 MRRAAPYAELTREQYDAVLRMLAEGYTSRNGPRAAYLHRDV---VSGTLRGRRGGKLVAV 518 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 TSGGTIP+ Y+V+L E +A + VG ++E+ ES D+ LG S+RI +I Sbjct: 519 TSGGTIPENADYAVVL---EPQAIN--VGTVNEDFAVESLAGDVFQLGNASYRILRIESG 573 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELG-------EMIGDFLH 640 +V V A G+ +PFW GE GR EL E IG L Sbjct: 574 RVRVEDAQGQPPNIPFWLGEAPGRSDELSLGVARLREQIGRLLE 617 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 231/850 (27%), Positives = 347/850 (40%), Gaps = 123/850 (14%) Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 +E I + R A G++P LV+ER DE G ++++H+P+G RV+ W +A+ Sbjct: 704 DEAAARQIVDYLARARAALGVLPTHDTLVMERFFDESGGTQLVIHAPFGSRVNRAWGLAL 763 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 R + + A++D IV + + + D ++ +A+ + LF Sbjct: 764 RKRFCRQFNFELQAAATEDAIVLSLTGSHSFVLDEVWRYLHSASAEHLLIQALLDAPLFG 823 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPV 823 R+R A AL +P T G +T QR+R+ LL + P P+ Sbjct: 824 VRWRWNATTALGLPRYTGGRKTAPQLQRMRSEDLLTSVFPEQAACLENVVGERELPRHPL 883 Query: 824 ILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD 883 + +T+ +CL D D L+RR+ G++++ PSP A +L + Y D Sbjct: 884 VDQTVDDCLHDAMDSERWIALLRRIESGDVRLVARDLPAPSPLAAEIL--NAKPYAYLDD 941 Query: 884 APLAERRASVL---------SLDSELLRNLLGQVDPGELLD------PQV--IRQVEEEL 926 AP+ ERR + S D LG +DP + PQ + ++ E L Sbjct: 942 APIEERRTQAVLNRRWTDPSSADD------LGALDPDAIASVRDEAWPQARSVDEMHEAL 995 Query: 927 QRLA--PGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAM 984 LA A+G EG P +E LAQ + ++A+ PA Sbjct: 996 TGLACITEAEARGNEGW--------PQWLESLAQSGRATRLQIAADAA---DAALWLPA- 1043 Query: 985 ISGQERLACMDDAARLRDALGVRL--PESLPEIYLHRVSY--PLRDLFLRYLRAHALVTA 1040 ERL C AA + G R P + P+ Y S L D+ L + A Sbjct: 1044 ----ERLTCF--AALYPEPDGPRFAPPLTAPKGYADEWSADDALVDVLRARLTGFGPLPA 1097 Query: 1041 EQLAHEFSLGIAIVEEQLQQLREQGLVMN-------LQQ-----DIWVSDEVFRRLRLRS 1088 +A L VE+ L +L +G VM LQ D W + R+ + Sbjct: 1098 AAIADTLRLPQTSVEQALIRLEAEGYVMRGRFTPQALQAPDAPGDEWCERHLLARIHRYT 1157 Query: 1089 LQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAG 1148 ++ R PV + R L E Q + P T EG D + V+EQL G Sbjct: 1158 VKRLRREIEPVERHDFMRFLFEWQHLTPDTRS-------------EGRDALAAVLEQLEG 1204 Query: 1149 VGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS-----GQKKLGEDDG--LVALHL 1201 AS WE ILPARV+ Y++ LDEL G ++W+ + G G +V L Sbjct: 1205 FEAAASAWEEDILPARVKAYTNTSLDELCRAGKIVWTRLTERSRSAAGPVRGTPIVLLPR 1264 Query: 1202 QEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEA 1261 + S A Q S QA+ L+ GA F ++ +R V L+ A Sbjct: 1265 PQVRVWSALIDPARQPELSPRAQAVHDALSQHGAMFFDELLHELR------VLRIELENA 1318 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSS--NARTSTRRSHRA-------RRGR-PVYAQPVS 1311 L LV G++ SD +A LRAL + ++ NA + +RR GR + +PV Sbjct: 1319 LGELVAAGLVNSDSFAGLRALLKPAAKRNAYSGSRRVRSTALIGGMDDAGRWALVNRPVP 1378 Query: 1312 PRVSYN-TPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSM 1370 VS N TP + + + P E + A +L RYG++ + + E P Sbjct: 1379 AAVSANETPPQSLQSQRRRTLPPEIVEHV---AMTLLRRYGVVFWR--LLEREADWLPPW 1433 Query: 1371 QTLCR---SMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSAN 1427 + L R +E G I GRFV GL G QFA I LR++ A V + Sbjct: 1434 RDLLRVYQRLEARGVIRGGRFVNGLAGEQFALPEAIPLLREVRRHANDGAF---VCVGGT 1490 Query: 1428 DPANVWGNLL 1437 DP N+ G LL Sbjct: 1491 DPLNLAGTLL 1500 >UniRef50_O27830 Uncharacterized ATP-dependent helicase MTH_1802 n=24 Tax=Archaea RepID=HELX_METTH Length = 862 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 295/895 (32%), Positives = 451/895 (50%), Gaps = 79/895 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 + P +WF R F T Q R + LV +PTGSGKTL AFL + L R Sbjct: 17 ILHPWVSEWFRRTFDDFTEAQRYAIMDIHRGRNVLVSSPTGSGKTLTAFLSIISELTRLA 76 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + E + +YISP+KAL D++RNL+ PL I D G ++ +R +RTG Sbjct: 77 DDGELE----DSVYCIYISPLKALDNDIERNLEEPLSAIRDIAAGEGR-DLEIRKAVRTG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 DT + ERS++ + PP ILITTPE+L ++L + + RE L V VI+DE+H++A +KRG H Sbjct: 132 DTTSYERSRMLKKPPHILITTPETLSILLVAPKFREKLSTVRYVIVDEIHSLADNKRGVH 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVVNPPAMRHPQIR 247 L+LSLERL L+ RIGLSATV VA FL G +R +V+ ++ I Sbjct: 192 LSLSLERLQHLV-GDFTRIGLSATVHPLERVARFLVGYSYGSERECLIVDVSYLKELDID 250 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 ++ PV DD+ VA+ E +A ++ + I D HR+T++FTN+R E Sbjct: 251 LICPV---DDI--VAADPEEIGNA-----LYDILHDLIED----HRTTLIFTNTRSGTES 296 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L R P ES S + +HH S+S+E R T Sbjct: 297 VVYNLK-------SRFP---------ESYSDSN-----------IMAHHSSLSREIRLET 329 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK GEL+ VV+++SLELGID+G +DLV+ +++P SV+ LQRIGR+GHQ+ SKG Sbjct: 330 EEKLKRGELKAVVSSTSLELGIDIGYIDLVVLLSSPKSVSRALQRIGRSGHQLHQRSKGR 389 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 R DLV+ ++I++ G+++++ P N LDVLAQ A + +D + +R Sbjct: 390 IVVVDRDDLVECSLILKNALEGKIDSIKVPENCLDVLAQHIYGMAIENPWDIDHALAVIR 449 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSG 546 + +++L R + + L L+G Y + K+ + + R A++L T+ Sbjct: 450 NSYCYRNLSREDYLSVLSYLAGEYVELEERYVYAKIWVDYDKNQFGKRGKLARMLYSTNI 509 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 GTIPDR V K G + VG ++E+ + + R D LG +R V Sbjct: 510 GTIPDRSAAVV-------KCGGKVVGRIEEDFMEKLRKGDTFVLGGRIYRFNYARGMTVN 562 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG--------TIPPWL-A 657 VTPA G +P W E +L I F ++ DG F G I +L Sbjct: 563 VTPASG-PPTIPSWFSEQLPLSFDLALDIQRFRDIM-DGKFQYGRSRDEIMEFIMSYLHV 620 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 +E ++I EQ GI P R +++E G I+ HS +GRRV++ + A+ Sbjct: 621 DERAASSIYEYFREQYLYAGI-PSIRRMLVEYYTGFGGRKFIVFHSLFGRRVNDAISRAV 679 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL-FEPEKLLQIVREAVGSSALF 776 A I + D + SD+G ++GK+ F EPE L ++++A+ + Sbjct: 680 AYVIARRYRRDVMISVSDNGFYL---SSEGKMGGLEAFRELEPENLRNVLKKALDRTETL 736 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPD-FPVILETLRECLQDV 835 A+RFR CA RAL++ R G + +Q++R LL+ D FP++ E RE ++D Sbjct: 737 ASRFRHCAGRALMILRRYRGEEKSVGRQQVRGKILLKFVSELDDKFPILEEARREVMEDY 796 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLF-GYVAEFMYQSDAPLAER 889 D+ R++ + G+++I + T PSPFA +L+ GY+ Y+ R Sbjct: 797 MDIENAIRVLEWIRDGDMEIKQINTRIPSPFAFNLVAQGYLDVLKYEDRIEFIRR 851 >UniRef50_A5UKH9 ATP-dependent helicase, Lhr-like protein n=5 Tax=Methanobacteriaceae RepID=A5UKH9_METS3 Length = 866 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 272/909 (29%), Positives = 449/909 (49%), Gaps = 115/909 (12%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL--FREGG 74 P R WF F+ T Q ++ + + LV +PTGSGKTL AFL L L + G Sbjct: 20 PWVRQWFDETFEDFTPAQKKSIVDIHKGNNILVSSPTGSGKTLTAFLSILSELTTLSQKG 79 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 E + + +YISP+KAL D+++NL+ PLKGI + ++ +R +RTGD Sbjct: 80 ELEDKVY------CIYISPLKALDNDIEKNLEEPLKGI----EKIAGKDLGIRKAVRTGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T +R K+ + PP ILITTPE+L ++L + + RE L V+ VIIDE+H++A +KRG HL Sbjct: 130 TTQYQRQKMLKKPPHILITTPETLSILLVAPKFREKLSNVKYVIIDEIHSLAENKRGVHL 189 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVVNPPAMRHPQIRI 248 +LSLERL L+ RIGLSATV +VA FL G +R ++N ++ I++ Sbjct: 190 SLSLERLQHLI-GQYTRIGLSATVSPLEEVAKFLVGYEYGVERDCKIININYLKDLDIKV 248 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSRGLAEK 307 + P VS + ED+ G +LD++++ +++T+VFTN+R E+ Sbjct: 249 LCP------VSDIMLADSEDTRLG---------TYNLLDDLIQENKTTLVFTNTRSGTER 293 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L +++ +A HH S+SKE R T Sbjct: 294 FVYNLKKMFPKNYNDENIMA---------------------------HHSSLSKEVRLAT 326 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E LK G+L+ VV+++SLELGID+G +DLV+ + +P SV+ LQRIGR+GH++ S G Sbjct: 327 ENKLKEGKLKVVVSSTSLELGIDIGYIDLVVLINSPKSVSRALQRIGRSGHKLNEKSTGR 386 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 R DLV+ +V+++ G+++ + P N LDVLAQ + + +D Y +R Sbjct: 387 IIVTNRDDLVECSVLLKDAKEGKIDKINIPQNCLDVLAQHIYGMSIENPWDIDYAYDVIR 446 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSG 546 ++ +K+L R ++ L ++G Y + K+ + + R A++L T+ Sbjct: 447 KSYCYKNLTRDDYEDVLSYMAGEYEELEERYVYAKIWIDYKENTFGKRGKLARMLYSTNI 506 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 GTIPD VL+ K VG+++E+ + + D LG ++R + Sbjct: 507 GTIPDSS--GVLV-----KCDGETVGKIEEDFMERLKKGDTFVLGGQTYRFNYGKGMTIN 559 Query: 607 VTPAPG-------RSARLPF----------WRGEGNGR------PAELGEMIGDFLHLLA 643 V+PA G S +LP +R + + E+ E I D+L++ Sbjct: 560 VSPANGPPTIPSWFSQQLPLSFDLAMDIQRFRAHMDAKFRYGKSKQEIMEFIYDYLYV-- 617 Query: 644 DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR-IILH 702 F + +I + E+ T A I P ++ L++E + GD R +I H Sbjct: 618 -DDFAANSIYEYFVEQYTYAKI--------------PSNQRLLIEYYKG-FGDRRFVIFH 661 Query: 703 SPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKL 762 S +GR+V++ + A+A + + + ++ SD+G T G L A PE Sbjct: 662 SLFGRKVNDALSRAVAYIVARQYNTNVTISISDNGFYLSAEGTLGGLE--AFKQLTPENF 719 Query: 763 LQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-DF 821 I+ +++ + A+RFR CA R+L+ G + +Q++R LL+ Q DF Sbjct: 720 KNILTQSLNKTETLASRFRHCAGRSLMTLRHYKGEAKSVGRQQVRGKILLKFVQEMDNDF 779 Query: 822 PVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQ 881 ++ E RE L+D D+ +++ + G+++I + T P+PFA +L+ + + Q Sbjct: 780 SILKEARREALEDYMDVNNALKVIELIANGQMEIKTINTIIPTPFAFNLVSQGYLDVLNQ 839 Query: 882 SDAPLAERR 890 +D +R Sbjct: 840 NDKAEFTKR 848 >UniRef50_UPI0000F5176A ATP-dependent helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F5176A Length = 1698 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 277/978 (28%), Positives = 470/978 (48%), Gaps = 103/978 (10%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF + + + Q + + + ++ LV +PTG+GKTL FL ++ LF++ R Sbjct: 23 WFNTKYSELSEPQKKAIPLIHQKKNVLVSSPTGTGKTLTGFLSIINELFKKA----RNNE 78 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 +YISP+KAL D+ +NL PL I + +G ++V +R+GDT ER+ Sbjct: 79 LEDKIYCVYISPLKALANDINKNLNEPLSEIYALAKEKGLDIPEIKVAVRSGDTAQSERN 138 Query: 142 KLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 K+ R PP I+ITTPES L +T ++ +E VE VI+DE+H V+ +KRG+ L+ +LERL Sbjct: 139 KMLRKPPHIIITTPESFSLAITATKFKEKFSSVEYVILDEIHEVSSTKRGSLLSFNLERL 198 Query: 201 DALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRIVVPVANM 255 + L RIGLSAT + ++L G R ++ ++ + I+ PV ++ Sbjct: 199 EN-LSPGFVRIGLSATQAPLDLIGSYLCGYNGEHKRDFEIIEVNTNKYLDLSIITPVKDL 257 Query: 256 DDVS-SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 VS VA+ D ++D V H++T++FTN+R E + RL Sbjct: 258 TMVSYEVANEKMYDI---------------LVDLVNSHKTTLIFTNTRSSTEHVAMRLK- 301 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 A E+ +HH S+ K+ R E LK+G Sbjct: 302 ---------------ARGIENI----------------EAHHSSLGKQTRIEVENRLKNG 330 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 EL+CV+ ++SLELGID+G +D+VIQ+ +P SV+ LQRIGR+GH V +S G F Sbjct: 331 ELKCVITSTSLELGIDIGYIDMVIQIGSPKSVSRALQRIGRSGHGVKDLSLGRFIVFDLD 390 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 DL++ AV+ + + ++ +T P NPLDVL+Q ++ + VD Y+ +R + + Sbjct: 391 DLMECAVMTKAAYDHEIDKVTVPENPLDVLSQGIISMSLEKNWDVDVAYNVIRNSFSFHT 450 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 L + +TL LSG+ + K+ ++ + + + +++ + GTIP+ Sbjct: 451 LEYGDYISTLQYLSGKIEG---NTLFSKIWYDEDEKVFGKKASTRMIYFMNVGTIPEEAN 507 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 Y+V+ +G R +G+L ++ V + DI LGA ++ + T++ + V A G Sbjct: 508 YNVVNEKG------RMIGQLSDKFVERLKNGDIFVLGAKTYMFLKATKNNITVKVATGMK 561 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA-----NIQGLI 669 +P W GE R +LG +IG+F L + WL E + ++ + Sbjct: 562 PTVPSWTGELLPRSYDLGILIGEFRKTLYERIKNGEETEKWLMENYRVDSFGARSLISYV 621 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 + Q N T +P L +E D + II H P GRRV++ + A + +GA+ Sbjct: 622 KTQGNFT--IPTEDLLYIEGYIDN-DLYSIIFHIPLGRRVNDALSRAYGLAVSNKYGANT 678 Query: 730 SVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARAL 788 + +D+G + + K+P + L P +V ++ ++ LF RFR CA R+L Sbjct: 679 RISVNDNGFTLTL---NRKVPIKDVVGLLTPSNFRDLVDRSIINTELFKQRFRYCATRSL 735 Query: 789 LMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR- 847 ++ + + +Q+LR+ +LL I + +FPVI E E DV D+ + Sbjct: 736 MVLRKYKQTDISVARQQLRSDRLLRILESMDNFPVIKEAFNEVKYDVMDVERAAWFVNDV 795 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP--LAERRASVLS---------- 895 ++ +I D +T T SPF+ +L+ V++ + D L E R+ +L Sbjct: 796 ISKKHYKIKDYSTET-SPFSYNLILSGVSDIVLMEDRSKLLKELRSKLLDKIYGTEGIEF 854 Query: 896 --LDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTV 953 DS+L+ N P + D + R+ E + P R+ FD E + + Sbjct: 855 LIKDSKLVENYFKNKIPA-IQDIESYREFLEHFLYVDPFRKK------FDSPLEYATIDL 907 Query: 954 EDLAQRHTGSSEEVASYL 971 +++ ++ S E V ++ Sbjct: 908 DEMTEQLINSGELVYCFI 925 >UniRef50_Q8U202 Large helicase-related protein n=3 Tax=Thermococcaceae RepID=Q8U202_PYRFU Length = 866 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 287/901 (31%), Positives = 448/901 (49%), Gaps = 88/901 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAA--RSEHALVIAPTGSGKTLAAFLYALDRLFR 71 + P +WF R F+ T PQ + V + E+ L+ +PTGSGKTL+AFL + L Sbjct: 19 ILDPIVGEWFRRKFR--TFTPPQRYAVIEIHKGENVLISSPTGSGKTLSAFLSIISELIS 76 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 G R+ +Y+SP++AL D++RNLQ PL+ I + R+ G +RV +R Sbjct: 77 LG----RQGKLEDKIYCVYVSPLRALNNDIRRNLQEPLQEIYELARKLGVEIPEIRVSVR 132 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRG 190 T DT + E+SK+ + PP ILITTPESL + L + + RE LR V+ VI+DEVHA+A +KRG Sbjct: 133 TSDTTSYEKSKMLKKPPHILITTPESLAIALNAPKFREKLRDVKWVIVDEVHALAENKRG 192 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL------GGDRPVTVVNPPAMRHP 244 +HLAL+LERL L RIGLSAT+ +VA F+ G RP +V+ + Sbjct: 193 SHLALTLERLRELTGREFVRIGLSATIHPLEEVAKFVFGFDDNGEPRPGLIVDVSFAK-- 250 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 +I+I V D V + A+ E + R G + V ++T++FTN+R Sbjct: 251 KIKISVESVVEDLVYTPANVLSEALYR-RIGEL-----------VKNRKTTLIFTNTRSG 298 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 E++ L +++ P A ++++ +HH S+S+E R Sbjct: 299 TERVVYHLKKMF-------PEWA--------------DKIE--------AHHSSLSREVR 329 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E+ LK GEL+ +V+++SLELGID+G++DLVI + +P SV LQRIGRAGH++ VS Sbjct: 330 LNVEERLKRGELKIIVSSTSLELGIDIGSIDLVILIGSPKSVNRALQRIGRAGHRLHEVS 389 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 +G+ R DLV+ V+ RL+ + P NPLDVL Q + A +V+E Y Sbjct: 390 EGVILALDRDDLVEVTVLAHNARNRRLDRIKIPKNPLDVLVQHVLGMALERVWEVEEAYR 449 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR---ETGILTARPGAQLL 541 VRRA P++DLP F+ +++L RY +G+++ K V+ + E G R G Sbjct: 450 VVRRAYPFRDLP---FEDFMNVL--RYLAGEYAGLEEKKVYAKIWLEDGKF-GRRGKMTR 503 Query: 542 AV--TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 A+ + GTIPD V + +G ++EE DI L ++ + Sbjct: 504 AIYYMNVGTIPDEAKIDVF------TMDMKYIGTVEEEFAEHLMPGDIFVLAGRTYEFVK 557 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF----LHLLADGAFFSGTIPPW 655 +++ V P G +P W E +L I F LL + + + + Sbjct: 558 SKGNRIYVIPREGAKPTIPSWFSEMLPLSFDLAIDIQRFRKEVKRLLNNKRAKTFLMRKY 617 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 +E T I EQ + I+P +++E R E + H+ GRR ++ + Sbjct: 618 GIDETTANAILSYFREQAKYS-IIPDDETVLVEVVR-EGNVVKYFFHTLIGRRANDALSR 675 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 A A I + V +D+G + ++P + + LF E L +++++A+ ++ L Sbjct: 676 AFAYLISKRKKCNVGVAITDNGFMLKVPREKELSQEEILELFRVENLREVLKKALDNTEL 735 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLE-IAQGYPDFPVILETLRECLQD 834 RFR A R LL+ R G L +Q++ A LL + + YPDFP++ E RE ++D Sbjct: 736 LKRRFRHVANRGLLVLRRYMGREKSLSRQQMNAQTLLNFLKKNYPDFPLLKEVYREIMED 795 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 D+ E + + G I++ PSPFA +L E SD L E R ++ Sbjct: 796 KMDIGNAELFLGWIKEGRIEVIIREHKYPSPFAFNL------EVAGASDVVLMEDRRELI 849 Query: 895 S 895 Sbjct: 850 K 850 >UniRef50_Q3JLU0 ATP-dependent helicase, DEAD/DEAH family n=75 Tax=cellular organisms RepID=Q3JLU0_BURP1 Length = 1700 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 251/628 (39%), Positives = 337/628 (53%), Gaps = 65/628 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P WF F PT Q W LV APTGSGKTL AFL ALD L R+ Sbjct: 116 DAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTLTAFLSALDDLVRD 175 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + ++Y+SP+KAL D+ NL+ PL GIA E RRG +R +RT Sbjct: 176 A--LAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGLPVPQIRTAVRT 233 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGA 191 GDT ER ++ P IL+TTPESLY++L+S + R L TVI+DE+HA+A +KRG+ Sbjct: 234 GDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDEIHALANAKRGS 293 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR-----PVTVVNPPAMRHPQI 246 HLALSLERLDAL+ RIGLSAT + VA FL G R +V+ R + Sbjct: 294 HLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAIVDTGHTRTRDL 353 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + +P + V + +W + I + HR+T+VF N+R +AE Sbjct: 354 ALELPPMPLGPVMA--------------NDVWERLYDRIAELAAAHRTTLVFVNTRRMAE 399 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + AAR H GA + IA +HHGS++KE R Sbjct: 400 R---------AAR------------HLADRLGADA---------IA-AHHGSLAKEHRFD 428 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 EQ LK G+L+ +VAT+SLELGID+G V+LV Q+ +P +A LQR+GR+GH +GGV KG Sbjct: 429 AEQRLKHGKLKLLVATASLELGIDIGDVELVCQLGSPRGIAPFLQRVGRSGHHIGGVPKG 488 Query: 427 LFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA A Y V Sbjct: 489 RLFPLSRDELVECAALLDCVRRGELDVLRIPRAPLDVLAQQLVAEVACREWDEHALYRCV 548 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 +AAP+ L R FD L ML+ + S G +A+ + V + R GA+L AVT Sbjct: 549 TQAAPYATLARETFDEVLKMLAEGFTSRRGARAAYLHRDVVAH---TVRGRRGARLAAVT 605 Query: 545 SGGTIPDRGMYSVLL-PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 SGGTIPD Y+VLL P+G +G ++E+ ES D+ LG S+RI +I Sbjct: 606 SGGTIPDNADYAVLLEPQGVN------IGTVNEDFAVESLAGDVFQLGNQSYRIIRIETG 659 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAEL 631 +V V A G++ +PFW GE R EL Sbjct: 660 RVRVEDAHGQAPNIPFWLGEAPARSDEL 687 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 16/225 (7%) Query: 680 PGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 P LV+ER DE G ++++HSPYG R++ W +A+ R + + A+DD ++ Sbjct: 841 PTQDTLVMERFFDESGGMQLVIHSPYGSRINRAWGLALRKRFCRSFNFELQAAATDDALI 900 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 + D ++ +A+ + LFAAR+R A +L +P G + Sbjct: 901 LSLSHAHSFALDEVWRYLRASSAEHVLIQALLDAPLFAARWRWNATTSLALPRFAGGRKV 960 Query: 800 PLWQQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLM 845 QR+++ LL + P P++ +TL +CL D D L+ Sbjct: 961 APQLQRMKSEDLLATVFPDQVACAENIVGEREVPKHPLVDQTLDDCLHDAMDTEGWLALL 1020 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERR 890 RR+ G++ + PSP A +L + + DAPL ERR Sbjct: 1021 RRIEAGDVALVARDLPAPSPLAAEIL--NAKPYAFLDDAPLEERR 1063 Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%) Query: 1342 LAENMLDRYGIISRQ--AVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAE 1399 +A +L RYG+ + A AE +P + + + R +E G I GRFV GL G QFA Sbjct: 1556 VARTLLRRYGVAFWRLLACEAEWMPS-WRELLPVYRRLEARGEIRGGRFVAGLAGEQFAL 1614 Query: 1400 RLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLP 1438 I LR+L + + + +S DP N+ G LLP Sbjct: 1615 PDAIPILRELRRRPAEGLM---LCVSGADPLNLTGTLLP 1650 >UniRef50_B3T6F6 Putative DEAD/DEAH box helicase n=1 Tax=uncultured marine microorganism HF4000_APKG2H5 RepID=B3T6F6_9ZZZZ Length = 1763 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 286/938 (30%), Positives = 436/938 (46%), Gaps = 122/938 (13%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHV--AARSEHALVIAPTGSGKTLAAFLYALDR 68 L D+ SP R+WF+ F P +PQ + EH L+ +PTGSGKTL AFL +D Sbjct: 16 LLDILSPPVRNWFVDTF--PDFTEPQKIAIPRILNGEHLLLCSPTGSGKTLTAFLTIIDD 73 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L R + T T + +YISPIKAL D+Q+NL PL I + R ++++ Sbjct: 74 LVRRSLDGTLP----DTVQCVYISPIKALANDIQKNLIGPLSEIKE--RFLPSRAKDIKI 127 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGS 187 +RTGDTP ER K+ R PP ILITTPESL L+L S R R L+ ++ +IIDE+H++ + Sbjct: 128 ALRTGDTPQNEREKMLRRPPHILITTPESLGLILASKRWRPNLKDLKWMIIDEMHSLVSN 187 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP---------VTVVNP 238 KRG HL+LSL +D ++ + QRIG+SAT+ DVA FL P V++ N Sbjct: 188 KRGTHLSLSLALMDTVVSSEVQRIGISATMEPLDDVAEFLVASDPRESDMEPQRVSIANV 247 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 R + I++P A SS+ D + R I + V H +T+VF Sbjct: 248 SGSREIDLDIILPTARF---SSIPIKEILDHNIDR-----------IKELVEAHTTTLVF 293 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 N+R + E + RL A E G HHGS Sbjct: 294 VNTRNMTETVVQRLK----------------IAGLEGVEG----------------HHGS 321 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH 418 + K R E+ LK+G LR VV+++SLELGID+G+VDLVIQV +P S+++ LQR+GRA H Sbjct: 322 MDKTIRLDVERRLKNGLLRAVVSSTSLELGIDIGSVDLVIQVGSPGSISTALQRLGRASH 381 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQ 478 QVGG+ + F P + DL++ + + G ++ L P N LDVLAQ + + + Sbjct: 382 QVGGIPRARFLPTSPHDLLELVAVQTGILRGSMDLLKFPKNCLDVLAQFMIGLSIIREWD 441 Query: 479 VDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW-NRETGILTARPG 537 +DE Y V + P++ LP + LD+L + +W + E R Sbjct: 442 IDEGYELVTSSWPYRSLPYEDYIEVLDLLE-----------EERRIWVDWEDNRFGKRGF 490 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 AQ++ T+ GTI Y V +G VG+L V R D+ LG +++R+ Sbjct: 491 AQMIYYTNIGTIAPDNNYLVFTSDGT------LVGQLSSSFVQSLRNGDVFLLGGSTYRV 544 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA 657 + +V VT A G +P W GE R EL + I L +A + P L Sbjct: 545 SSVRGTRVNVTSATGYRPTIPSWTGEAMSRTHELSQEILQLLGHVALRLRLGDDVKPLLT 604 Query: 658 EENTIAN-----IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 + ++ + EE T VP +++E+ + + I+ + GR + Sbjct: 605 DVLGLSRPVASALSEFFEEHCATTFQVPSRDRILVEQVEAPLPTY--IVTTCRGRAFNMA 662 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREA--- 769 AG + ++DD IV + + E ++ +I R Sbjct: 663 LGYLFAG-----------IASADDVIVHELSFDENGFMVKLSHEVEVSRIPEIFRNGRSG 711 Query: 770 ------VGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPV 823 + S LF RFRE ++R++L P R G Q + +A Q+++ + D + Sbjct: 712 DTLQRFLMDSQLFTKRFREVSSRSMLNPRRIGGDEVSPKQFQQKAEQIMQKHRKMDDSII 771 Query: 824 ILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD 883 + E + E L D+ L+ + R++ +++I PSP +L + + Sbjct: 772 VREVMNEILHTDLDMEQLDDFISRMDSEDVRIVHRKVKMPSPLGMTLFMSSFEDLL---- 827 Query: 884 APLAERRASVLSLDSELLRNLLG------QVDPGELLD 915 L R + +D E+LR LLG +D G+L D Sbjct: 828 -SLRTRAFLIKDVDPEILRRLLGARSLATDLDEGKLDD 864 >UniRef50_Q57742 Uncharacterized ATP-dependent helicase MJ0294 n=6 Tax=Archaea RepID=HELX_METJA Length = 841 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 270/901 (29%), Positives = 444/901 (49%), Gaps = 97/901 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE--HALVIAPTGSGKTLAAFLYALDRLF 70 ++ ++WF R +K T PQ + + E + L+ +PTGSGKTL+AFL ++ L Sbjct: 18 EILEKPVKEWFKRKYK--TFTPPQRYAIKEIHEGKNVLICSPTGSGKTLSAFLAGINELI 75 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + E+ E ILY+SP++AL D++RNL+ PLK I D + G +RV + Sbjct: 76 KLSMENKLEDR----IYILYVSPLRALNNDIERNLKEPLKEIYDVAKEIGIELDEIRVAV 131 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKR 189 RT DT + ++ ++ + PP ILITTPESL + L S + + L G++ VI+DE+HA+ +KR Sbjct: 132 RTSDTTSSQKQRMLKKPPHILITTPESLAIALNSPKFSQLLSGIKYVIVDEIHALT-NKR 190 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIRI 248 G HL+LSLERL+ + + RIGLSAT+ ++VA FL G+ R +V+ + +I++ Sbjct: 191 GVHLSLSLERLNRI--ANFIRIGLSATIHPLTEVAKFLVGNGRDCYIVDVSYKKEIEIKV 248 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSRGLAEK 307 + PV DD S E S Y +L +++ H++T++FTN+R E+ Sbjct: 249 ISPV---DDFIYTPS---------EEISKRLY---NLLKKLIEEHKTTLIFTNTRSATER 293 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L +L +++ +HH S+S+E R Sbjct: 294 VAFYLKQLGVEKVE--------------------------------THHSSLSREHRLEV 321 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK GE+R ++++SLELG+D+G++DLVI + +P SV+ LQRIGR+GH++ SKG+ Sbjct: 322 EEKLKKGEIRVCISSTSLELGVDIGSIDLVILLGSPKSVSRALQRIGRSGHRLHEKSKGI 381 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 P R DLV++ V+ G+++ + P N LDVLAQ V A VDE Y+ ++ Sbjct: 382 IIPFDRDDLVENVVLAYDAKIGKIDRIHIPKNCLDVLAQHLVGMALEKVWDVDEAYNLIK 441 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 +A P+KDL ++ F L+ L+G + A +W ++ + + + G Sbjct: 442 KAYPYKDLSKKDFLDVLNYLAGGIEEKNVYA----KIWLKDNKFGKRGKSVRAIYYMNVG 497 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPD V+ A + VGE++EE + DI LG +++ +++ V Sbjct: 498 TIPDETAVDVI-------ADGKYVGEVEEEFAEKLMKGDIFVLGGKTYKYLGGRGNKIRV 550 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI----PPWLAEENTIA 663 +P W E +L I F S I + +E T Sbjct: 551 KEVFDEKPTIPAWFSEQLPLAYDLALDIEKF-----RKEVLSSDIEEIREKYDIDEKTAK 605 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 I+ ++EQ N IVP +++E +E + I H GRR +E A A A I Sbjct: 606 AIKNYMDEQ-NKFAIVPDDEKVLIENFDEEKRRY-YIFHFVAGRRANEALARAFANYISK 663 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 + + + +D G +P + K+ A I +++ V+E++ S + RFR Sbjct: 664 IKKCNVRISVNDYGFALILP-KNRKIKRADITELFNLDVVKNVKESIERSEILKRRFRHV 722 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD----LP 839 A R ++ R + + +Q+ A LL+ + + P+ ETLRE L+D D L Sbjct: 723 ATRGFMILRRYMNRKISVDRQQFNAEMLLKYCKE-VNHPLYRETLREILEDSLDIDNALD 781 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP--LAERRASVLSLD 897 E++ RR +I + +PSPFA +L+ ++ ++ D +AE V+ Sbjct: 782 YFEKIKRR------KIYYLELPSPSPFAFNLVVSASSDVIFMEDKKKMIAELHKKVMEFI 835 Query: 898 S 898 S Sbjct: 836 S 836 >UniRef50_D2EED6 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EED6_9EURY Length = 878 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 263/890 (29%), Positives = 450/890 (50%), Gaps = 94/890 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P + WF+ FK T Q ++ + ++ L+ APTGSGKTL+AF+ +++L Sbjct: 16 ETLGPIVKKWFISKFKGLTPPQKFSFKLIHDHKNVLITAPTGSGKTLSAFIPIINKLVEL 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD-----ERRRRGETEVNLR 127 D + + LYISP++AL D+ +NL +P++ + E+R+ + Sbjct: 76 SVND----QLKDEIKCLYISPLRALNNDIYKNLILPIEDLYKTPELIEKRK-------IT 124 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAG 186 +G+RTGDTP ER K +PP+I +TTPESL +ML S + + ++ VIIDE+H +A Sbjct: 125 IGVRTGDTPQNERRKQFVHPPNIFVTTPESLAIMLNSPKFIQKFVNLDYVIIDELHELAN 184 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQ 245 SKRG+HLA+SLERL L++ RIGLSAT+ A+FL G R VV+ + Sbjct: 185 SKRGSHLAISLERLTNLINHDFVRIGLSATIYPLEKAASFLVGTKRSCVVVDASWSKKIN 244 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSRGL 304 +++ PV D+ +DS I++++++ +R+T++FTN+R Sbjct: 245 AKVISPVK---DLIYTKESEIDDSMY------------NIINKIVKMNRTTLIFTNTRSG 289 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 E+L L + + + + +HHGS+S+E+R Sbjct: 290 TERLVFNLKKRFGYKDEE-----------------------------VSAHHGSLSREER 320 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E+ LK+G L+CVV+++SLELGID+G +D VIQ+ +P S+ LQRIGR+GH + Sbjct: 321 FSVEENLKNGRLKCVVSSTSLELGIDIGNIDNVIQINSPKSITRALQRIGRSGHGFKDTA 380 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 G R DL++ V++ +L+ T P NPLDVLAQ V +D+ Y+ Sbjct: 381 NGDLIINNRDDLIECTVMLYDGLKRKLDAFTMPENPLDVLAQHIVGMGLNKIWNIDDAYN 440 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRY-PSGDFSAFRPKLVWNRETGILTARPG-AQLLA 542 +++A +++L ++ F + L+G Y P + S + K+ +++++ R +L+ Sbjct: 441 LIKKAYSFRNLEKKEFMDLIKYLAGEYVPLRERSVY-GKIWFDKDSNKFGKRGRLTRLIY 499 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 T+ GTIPD +V + +++G ++EE + + + D+ LG ++ Q+ + Sbjct: 500 YTNIGTIPDEVAINVYIW-----GTKKKIGNIEEEFLEKLKKGDVFVLGGKVYKFQRSSA 554 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF-------LHLLADGAFFSG----- 650 V PA G +P W E EL IG F + L F Sbjct: 555 ADCFVLPAIGEKPNIPPWFSEQLPLSYELAIDIGKFRREFSSIITRLPKEKFIYKKQKEL 614 Query: 651 --TIPPWL----AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSP 704 I +L A++N+I +I I EQ T +P + +++E+ R ++ I HS Sbjct: 615 PEKIKKYLLSMPADKNSIISIYEYILEQVYFTDKIPSDKLILIEKTRYNDREY-TIFHSL 673 Query: 705 YGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD--TDGKLPDAAIFLFEPEKL 762 +GRRV++ + A + + +V +D+G A I + D L + I + + Sbjct: 674 FGRRVNDALSRVFAFILSDKLDEELELVINDNGF-ALISNEKIDDYLIKSVISVAYNSDI 732 Query: 763 LQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLE-IAQGYPDF 821 +I++E + + + RFR AAR L++ GHR + +Q++ A LL+ I++ DF Sbjct: 733 RKIIKENIKRTEMLRRRFRHAAARGLMILKNYKGHRIRVERQQINAQALLKIISEMDEDF 792 Query: 822 PVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 P++ E RE +DV D+ +++ + +I+ S + T PSPF+ +L+ Sbjct: 793 PILKEAYREIEEDVMDILNASSILKSIKSKKIKYSIIETPVPSPFSHNLV 842 >UniRef50_C5U8C6 DEAD/H associated domain protein n=1 Tax=Methanocaldococcus infernus ME RepID=C5U8C6_9EURY Length = 837 Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 270/901 (29%), Positives = 441/901 (48%), Gaps = 83/901 (9%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 + ++ R WF +K T Q ++ L+ +PTGSGKTL+AFL ++ L Sbjct: 15 IYEILEEPVRVWFKSKYKSFTPPQRYAIKEIHEKKNVLICSPTGSGKTLSAFLAGINELI 74 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + E E I+YISP++AL D++RNL+ PLK I + + G +RV + Sbjct: 75 KLSMEKKLE----DKVYIIYISPLRALNNDIERNLKEPLKEICETAKNLGIELDEIRVAV 130 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKR 189 RT DT + ++ K+ + PP ILITTPESL + L S + + L+ V+ VI+DE+HA+ +KR Sbjct: 131 RTSDTTSHQKQKMLKKPPHILITTPESLAISLNSPKFSQLLKDVKYVIVDEIHALT-NKR 189 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIRI 248 G HL+LSLERL+ + ++ RIGLSAT+ ++A FL G R +V+ + +I++ Sbjct: 190 GVHLSLSLERLNRI--SNFVRIGLSATISPLEEIAKFLVGVGRDCYIVDVSYRKEIEIKV 247 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + PV DD + + T E I + + + + H++ ++FTN+RG AE++ Sbjct: 248 LSPV---DDF--IYTPTEE---------ITKKLYSLLKKLIEEHKTVLIFTNTRGAAERV 293 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L +L G +HH S+S+E R E Sbjct: 294 AFHLKQL-------------------GIKGVG-------------THHSSLSREVRLEVE 321 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + LK GEL+ V ++SLELGID+G++DLVI + +P SVA LQRIGR+GH++ SKG+ Sbjct: 322 EKLKRGELKVVCTSTSLELGIDIGSIDLVILLGSPKSVARALQRIGRSGHRLHEKSKGII 381 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 R DL+++ V+ G+++ + P N LDVL+Q V A VDE Y+ V+R Sbjct: 382 IAFDRDDLIENTVLAYDARTGKIDKVKIPRNCLDVLSQHIVGMALEKVWNVDEAYNLVKR 441 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR--PKLVWNRETGILTARPGAQLLAVTSG 546 A P+KDL + F LD+L +Y SG R K+ ++ E + A+++ + Sbjct: 442 AYPYKDLSKEDF---LDVL--KYLSGSIEERRVYSKIWFDGEK--FGKKGRARVIYFMNV 494 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 GTIPD V ++ VGE++EE + DI LG +++ +++ Sbjct: 495 GTIPDETAVEVY-------ENNKLVGEVEEEFAEKLMKGDIFVLGGKTYKFLGGRGNRIR 547 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQ 666 V +P W E +L + F A I + +E I+ Sbjct: 548 VREVYNEKPTIPAWFSEQLPLAYDLALDVERF-RGEAKNISIDELIEKYEIDEKAGKAIK 606 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 G IEEQ + IVP +++E +E + I H GRR +E A A A + + Sbjct: 607 GYIEEQ-DRYAIVPTEEEMLIESFEEEKRRY-YIFHFVAGRRANEAIARAFANYVSKVKR 664 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 A+ ++ +D + + + LF + LL ++E++ S + RFR A R Sbjct: 665 ANVRIMVNDYSFALVLSKSRRLSKELLGQLFNID-LLSNLKESIERSEIIKRRFRHVATR 723 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 L+ R + + +Q+ A LLE + + P+ ET+RE L+D D+ Sbjct: 724 GFLILRRYLNKKISVERQQFNAEALLEYCKK-VNHPLYRETIREILEDYLDIENALNYYE 782 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLG 906 ++ E +I ++PSPFA +L+ ++ ++ D +R +L L ++L + G Sbjct: 783 KVK--ERKIIYKKLSSPSPFAFNLVVMASSDVIFMED-----KRKMILELHKKVLEAIKG 835 Query: 907 Q 907 + Sbjct: 836 K 836 >UniRef50_Q18G68 Lhr-like helicase n=2 Tax=Halobacteriaceae RepID=Q18G68_HALWD Length = 961 Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 294/953 (30%), Positives = 444/953 (46%), Gaps = 134/953 (14%) Query: 15 FSPATRDWFLRAFKQPTAV--------QPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 PA ++W++ F + A Q + + E+ALV APTGSGKTLA+F L Sbjct: 43 LDPAVQEWWVSQFGRYVAENDGFFTPPQREAIPLVDNQENALVCAPTGSGKTLASFTAVL 102 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD----ERRRRGET 122 + LF+ + R+ LYISP+K+L D+ RNL +PL GI + + + + E+ Sbjct: 103 NDLFKRARK--RDDGLENQVYCLYISPLKSLANDIHRNLDVPLSGIRERIIADAKSKSES 160 Query: 123 EV------------------------NLRVGIRTGDTPAQERSKLTRNPPDILITTPESL 158 E+ N+R IR GDT + ER ++ P IL TTPE+L Sbjct: 161 EIKTQSANTAATDGSSGSEEDVDSSINVRHAIRHGDTDSAERQRMLEETPHILNTTPETL 220 Query: 159 YLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 ++L + + RE LRG+E VI+DE+H++A +KRG HL++SLERL+ L TS RIG SATV Sbjct: 221 AILLNAPKFREKLRGIEYVIVDEIHSLAANKRGTHLSVSLERLEELTETSPTRIGCSATV 280 Query: 218 RSASDVAAFL------GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHA 271 S V FL G R +V+ +R + + P DD+ G + Sbjct: 281 EPLSTVGKFLVGYNNDGTPREYELVDTRFVREFDLSVECPT---DDLIHTPRGKVQ---- 333 Query: 272 GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA 331 + +E I D H++TIVFTN+R AE++ + L R S D Sbjct: 334 ---ARFYDRLEQLIDD----HKNTIVFTNTRSGAERVLSTL---------RDRSDTFD-- 375 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 ES SG HHGS+SK +R E LK+G L V ++SLELGIDM Sbjct: 376 --ESNSGC---------------HHGSLSKTRRQEIESELKAGTLDVVTTSTSLELGIDM 418 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRL 451 VDLV+QV +P SVA+ LQR+GRAGHQ+G +G R +LV+ AV+++ +G + Sbjct: 419 PHVDLVVQVGSPKSVAALLQRVGRAGHQLGETVEGRVIALDRDELVECAVMLQKAESGFV 478 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 + + P DV +QQ A + + + + RA P+++ ++ L L+ Y Sbjct: 479 DRVFIPEGAHDVASQQIYGMAINEIRREATFRQILTRAYPYRNYGDDDWEELLRYLTADY 538 Query: 512 PSGDFSAFRPKLVWNRETGI----------------LTARPG--AQLLAVTSGGTIPDRG 553 D PK +W R+T L + G A+++ +T+ GTIPD Sbjct: 539 DGLDEKNVYPK-IW-RDTNDAPSGEHHYDEFPVGTPLIGKRGRLARVIYMTNIGTIPDSF 596 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 +VL ++ ++VG LDE+ + D+ LG + + +V V R Sbjct: 597 SCTVLT-----RSEDKQVGTLDEDYLDTLETGDVFVLGGDRFEYRYRRGSKVYVDRTSER 651 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFL-----HLLADGAFFSGTIPPWLAE----ENTIAN 664 +P W E +LG I F L ADGA WL E N+ Sbjct: 652 PT-VPSWFSERLPLSYDLGREIASFQGEVINRLEADGA---TATRQWLDEFPIDTNSARA 707 Query: 665 IQGLIEEQRNATG---IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 I + ++QR TG + R +V E + R +HS YGRR ++ + +A Sbjct: 708 ITRIYDQQRQYTGATSVSTDDRLVVEEELDRDSYRRRFYIHSTYGRRFNDGLSRLLAYHC 767 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 A+ + +D+G +P A + EP + +R A+ + L FR Sbjct: 768 AQQTNANVKIAVADNGFTLVMPLNRKVDVGAVLESIEPAAVRSDLRSALDGTDLLKRYFR 827 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPAL 841 A R+L++ R G+ QQ++ + LL A+ F VI ET RE L+D ++ A+ Sbjct: 828 INATRSLMILKRYKGYEKSAAQQQVSSEMLLSFAEELDSFAVIDETYREILEDKLNVDAI 887 Query: 842 ERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 E +R + E+ + V +PSP A FG + SD LAE ++VL Sbjct: 888 EEALRNIQDDELIVETVEVDSPSPRA----FGLAT--LAASDVVLAEDESAVL 934 >UniRef50_Q0W5W5 Lhr-like RNA helicase n=12 Tax=Euryarchaeota RepID=Q0W5W5_UNCMA Length = 885 Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 268/903 (29%), Positives = 446/903 (49%), Gaps = 83/903 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQ------PQTWHV--AARSEHALVIAPTGSGKTLAAFLYA 65 +F P+ R W+ F V PQ + + ++ L+ +PTGSGKTL++F Sbjct: 31 LFEPSVRQWWTETFGPKKQVNNGYFTPPQRLAIPLIHQGKNVLICSPTGSGKTLSSFTAI 90 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 ++ LF + E + +YISP+K+L D+ +NL+ PL I+ + G+ ++ Sbjct: 91 INELFLLASSEGLE----NSVYCIYISPLKSLANDIHKNLEQPLDQIS---KLYGDEKL- 142 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAV 184 +R IR GDT + ERS + R P IL TTPE+L ++L S R E L V VIIDE+H++ Sbjct: 143 IRAAIRHGDTASDERSSMLRKTPHILNTTPETLAILLNSPRFVEKLATVRWVIIDEIHSM 202 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPP 239 A +KRG L+L+LERL+ ++ RIG SATV + FL G R VTVV+ Sbjct: 203 ADTKRGVFLSLALERLEEVVRKPFVRIGCSATVEPLDKIGEFLAGCENGIPRDVTVVDTR 262 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +R ++++ PV N+ + + E +HA E + G++ E + +T+VFT Sbjct: 263 FVREFDLKLLCPVPNL-----IEASAQEVNHALYE------MIHGMIQE---NTNTLVFT 308 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE++ L + Y + E SG HHGS+ Sbjct: 309 NTRSGAERILYHLRKEYP------------DYYNEENSGC---------------HHGSL 341 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 SK R E LK+G L+ +++SLELGIDM +DLVIQV +P SV++ LQR+GRAGH Sbjct: 342 SKGGRLDIEDKLKAGTLKVATSSTSLELGIDMPYLDLVIQVGSPKSVSALLQRVGRAGHS 401 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 +G V KG R +L++ AV+++ G ++ + P N LDVL Q A + +++ Sbjct: 402 LGQVVKGRVIALDRDELIECAVMLKKAQDGFIDGVNIPENCLDVLIQHVFGMAINEPMEL 461 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-A 538 + VRR+ +++L FD + L+G P + + K+ + ETG + R A Sbjct: 462 ERVKKIVRRSYCYRNLSDEDFDEVIKYLAGSLPGMEDRSIYGKIWHDPETGKIGRRGKLA 521 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ 598 +++ T+ GTIPD V+ ++ + VG+LDE+ + + + D+ LG + Q Sbjct: 522 RMIYYTNIGTIPDEFSCDVI-----TRSDQKWVGKLDEQYLEKLQKGDVFVLGGKFFEFQ 576 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----DGAFFSGTIPP 654 +V V P+ R +P W E +L I DF ++A D + + Sbjct: 577 YRRGSKVYVDPSHSRPT-VPSWFSERLPLSFDLALHILDFRDMMARRVGDRSTRKWLLNT 635 Query: 655 WLAEENTIANIQGLIEEQRNATG--IVPGSRHLVLERCRDEIGDWR-IILHSPYGRRVHE 711 + +EN+ +I + +EQ G + + V+E D+ R S YGR ++ Sbjct: 636 YPLDENSAESIYQIFDEQIRYKGENSISTRKKFVIEEHLDKPHFRRYYYFQSNYGRPFND 695 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVG 771 + +A + ++ ++ SD G +P + I + K+ ++R ++ Sbjct: 696 GLSRVLAYIVSRQRTSNVTLSVSDSGFFISVPLSKKLDLLDYIESLDETKVKDLLRLSLE 755 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 S L FR A R+L++ GH+ +Q++ A +L A +F V+ E RE Sbjct: 756 ESQLLKRMFRINATRSLMILRNYKGHQKSAKRQQVSADMMLSYAHKLDNFAVLEEAYREI 815 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 ++D ++ +++++R + GEI++ + TPSP + FG + + SD LAE + Sbjct: 816 IEDKLEIAHIQQIIRGIKDGEIEVELIPVETPSPLS----FGIAS--LSASDVVLAEDKN 869 Query: 892 SVL 894 S+L Sbjct: 870 SLL 872 >UniRef50_D2RXL5 DEAD/H associated domain protein n=5 Tax=Halobacteriaceae RepID=D2RXL5_9EURY Length = 922 Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 298/953 (31%), Positives = 448/953 (47%), Gaps = 129/953 (13%) Query: 13 DVFSPATRDWFLRAF------KQPTAVQPQTWHVAARSE--HALVIAPTGSGKTLAAFLY 64 D+ PA ++W+L F + PQ + E + LV APTGSGKTL++F Sbjct: 32 DLLEPAVQEWWLEEFGEYVPENEGFFTPPQQGAIPKIHEGTNTLVCAPTGSGKTLSSFCA 91 Query: 65 ALDRLFREGGEDTREAHK--RKTSRILYISPIKALGTDVQRNLQIPLKGIAD--ERRRRG 120 +D L+R R+A + LY+SP+K+L D+ RNL++PL+GI R G Sbjct: 92 IIDELYRR----DRDADDGLENSVYCLYVSPLKSLANDIHRNLEVPLEGIESVVAERDDG 147 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 +R IR GDT + +R K+ P IL TTPE+L ++L S + RE LR VE VI+D Sbjct: 148 AEMGEIRHAIRHGDTSSSDRQKMLEETPHILNTTPETLAILLNSPKFREKLRTVEYVIVD 207 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL------GGD-RP 232 E+H++A KRG HL++SLERL+A++ RIG SAT+ VA FL GGD RP Sbjct: 208 EIHSLAAGKRGTHLSVSLERLEAMVDHEITRIGCSATIEPLEGVAEFLVGRDEPGGDSRP 267 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 +V+ R I + P ++ H RE + + + + H Sbjct: 268 YEIVDARFAREFDIELECPTDDL-------------IHTPRE-VVQERFYRMLHEHIQEH 313 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 +T+VFTN+R AE++ L E + A + E SG Sbjct: 314 TNTLVFTNTRSGAERVLHNLREEFDA-------------YDEENSGC------------- 347 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 HHGS+SK+ R E LK G L V +++SLELGIDM VDLV+QV +P SVA+ LQR Sbjct: 348 --HHGSLSKDVRHDIEARLKEGSLDVVTSSTSLELGIDMPHVDLVVQVGSPKSVAALLQR 405 Query: 413 IGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 +GRAGH+VG G R +L++ AV+++ G +++++ P N DV AQ A Sbjct: 406 VGRAGHRVGQTVTGRVIALDRDELLECAVMLKKADDGFVDSVSIPENAQDVAAQHIYGMA 465 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV----WNRE 528 + E +RRA P+ R D + L+ RY + D++ K V W E Sbjct: 466 IAEIRPESEVVGILRRAYPY----RNYSDVEWESLA-RYLTADYAGLEDKNVYAKIWRDE 520 Query: 529 TG---------------ILTARPG--AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 L + G A+++ +T+ GTIPD V + +AG V Sbjct: 521 NDPPSGEHHHEEYPVGQPLIGKRGRLARVIYMTNIGTIPDSFTCDV-----KTRAGDEWV 575 Query: 572 GELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAEL 631 G+LDE + D+ LG + + +V V R +P W E ++L Sbjct: 576 GQLDENYLDTLEKGDVFVLGGDHFEYRYRRGSKVYVDRTSARPT-VPSWYSERLPLSSDL 634 Query: 632 GEMIGDFLHLLADGAFFSGTIPP----WLAE----ENTIANIQGLIEEQRNATG--IVPG 681 G I F L + G PP WL E ++++ I L E Q G V Sbjct: 635 GREILAFQGELLERYDAGG--PPRVRAWLREFPLDDDSVRAIARLFEHQLRYAGSESVST 692 Query: 682 SRHLVLE--RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 + L +E R RDE + +HS YGR+V++ ++ +A R A+ V +D+G V Sbjct: 693 TDRLAIEVVRDRDEY-ERHYYVHSAYGRKVNDGFSRLLAYRCAQEATANVRVAVADNGFV 751 Query: 740 ARIP-----DTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRT 794 +P D +G L D E + + + +R A+ + L FR A R+L++ R Sbjct: 752 LSMPLNRKVDVEGILED-----LEADDVREDLRSALSGTDLLQRYFRINATRSLMILKRY 806 Query: 795 PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 G+ +Q++ + LL A+ DF VI ET RE L+D ++ LE ++ + EI Sbjct: 807 KGYEKSASEQQVSSEMLLGFAEDLEDFAVIEETYREILEDKLNVAELEEIVGDIAACEIA 866 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ 907 + +P+P A FG + SD LAE ++ L E + +G+ Sbjct: 867 VERTLLDSPTPRA----FGLAT--LSASDVVLAEDESAALQAFHEHVLEEIGE 913 >UniRef50_UPI0001745EC8 large helicase-related protein (lhr-2) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745EC8 Length = 879 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 270/931 (29%), Positives = 408/931 (43%), Gaps = 138/931 (14%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTW-HVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 D PA WF F +PT Q T HV A + L+ +PTGSGKTLA FL LD L Sbjct: 3 DSLHPALAAWFTGRFGKPTHAQEVTLPHVLA-GQSVLLTSPTGSGKTLAGFLGVLDDLLH 61 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLK--GIADERRRRGETEVNLRVG 129 E + +Y+SP++AL D+Q+NL PL G+A ++R+G Sbjct: 62 R----LDEGPLPHQTLAIYVSPLRALTYDMQKNLSEPLHEMGLAQ----------DIRIG 107 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSK 188 +R GDTPA ER+K + PP IL+TTPESL ++L RE L G VI+DE+HA+A +K Sbjct: 108 LRNGDTPASERAKFRKQPPHILLTTPESLAILLPQEGYREILSGCRHVIVDELHALAENK 167 Query: 189 RGAHLALSLERLDALLHTSAQ-----RIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMR 242 RG+HL+L+LERL+ ++ RIGLSAT ++A FL G R +V A R Sbjct: 168 RGSHLSLTLERLEQMVSAPPDGAGLVRIGLSATAAPLDELARFLCGTGRDCAIVQGRAER 227 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETG-----ILDEVLR----HR 293 ++ ++ P+ RE PY G ++ ++ R R Sbjct: 228 RRRVEVLSPLR-------------------RE----PYPPAGWTAQRVMKDLARLVEQKR 264 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 STI+F N+R AE + RL Q P +A + Sbjct: 265 STIIFCNTRSGAESTSLRLK-------QALPELAS----------------------VIE 295 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 +HH S+ ++ R E LK+GELR VV ++SLELGID+GAVD + ++TP V+ +QRI Sbjct: 296 THHSSLDRDLRLEVEDRLKAGELRAVVCSTSLELGIDIGAVDCAVMISTPKGVSRAIQRI 355 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GR+GH + S G+ DL++ V + +L+ + P DVLAQ V A Sbjct: 356 GRSGHNIHEESHGVLVATNVNDLMECVVCADMTRRTQLDAIRVLQKPYDVLAQHLVGMAM 415 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLD--MLSGRYPSGDFSAFRPKLVWNRETGI 531 D Y+ V +A P+ +L R FD L M G+ ++ K+V + + + Sbjct: 416 QKGYTRDTAYATVLQAWPYHELSRAEFDRVLQYVMGGGKSLEENYREVFGKIVEDAQGRL 475 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLG 591 +T + + + GTI G V L G+RR+GE++E V + DI L Sbjct: 476 MTPNRKVERDYLVNIGTIASEGAVRVYL-------GTRRLGEVEESFVKNLKYGDIFVLA 528 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT 651 + R+ + ++ V A GR +P W + L + + LA A Sbjct: 529 GRTVRLVETGVMEITVEAADGRLPTVPSWNANKMPLASGLAQEVTRLRTRLA--ARLEAN 586 Query: 652 IPP-----WLAEENTIA--NIQGLIEEQRNAT--GIVPGSRHLVLERCRDEIGD------ 696 PP WL E+ I+ N +++ RN +P ++E R+ D Sbjct: 587 EPPAATSDWLVEDYLISSVNADAIVKHCRNQCRFSAIPTDSLFLIELYREPEDDGEEFRE 646 Query: 697 -----------------------WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 HS GR ++ + IA R+ G +A V Sbjct: 647 PEPSLMPPKRGAGRAMRKPDPERCHFFFHSLIGRSANDALSRIIAHRVKEAVGGNALVTI 706 Query: 734 SDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 D G + + + LF + L +R A+ S L +FR A L++P Sbjct: 707 DDYGFLLSVRQFQELGLEEWRDLFHADNLEADLRSALAESQLVKWQFRGVAQTGLMVPRN 766 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGE 852 PG L Q R L ++ + PD P++ + +RE DLP + + + + Sbjct: 767 LPGAERRLKQLRWSGEILFQVLSKHEPDHPLLEQAIREATHVFLDLPRAAQFLAGAHQMQ 826 Query: 853 IQISDVTTTTPSPFATSLLFGYVAEFMYQSD 883 Q+ +V T PF+ + + E M D Sbjct: 827 WQLIEVPVVT--PFSFGIYASKIKESMLLED 855 >UniRef50_B4D6Q0 DEAD/H associated domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Q0_9BACT Length = 844 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 255/863 (29%), Positives = 397/863 (46%), Gaps = 74/863 (8%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 SP+ WF + PT Q W AR E+ L+ +PTG+GKT AAFL LD L + Sbjct: 8 SPSAFAWFADRYGTPTPAQEAAWPRIARGENILLASPTGTGKTFAAFLGVLDELVQLHAR 67 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 R +Y+SP++AL D+++NL PL+ + + + +RV +RTGDT Sbjct: 68 ----GELRDAIHCVYVSPLRALSYDLEKNLLEPLRELYGD-------QPPIRVQLRTGDT 116 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLA 194 + ER++ PP L+TTPESL ++L+ R L V +I+DE+HA+A +KRGAHLA Sbjct: 117 TSSERARQYTKPPHFLLTTPESLCVLLSQERWLVHLSRVRWLIVDEIHALAENKRGAHLA 176 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LS+ERL A QRIGLSAT+ +VA FL G T ++++ V Sbjct: 177 LSIERL-AHHCGQLQRIGLSATIAPLDEVARFLVGTHG-TCATLDVSSSKKVKLSVHTPL 234 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + A TG+ RE + D + +H++T+VF N R AE T L E Sbjct: 235 RKNPYPEAGYTGQ--RMIRE----------LGDLIRKHQTTLVFCNVRSGAEATTYWLRE 282 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + P +A DV HH S+ ++ R E LK G Sbjct: 283 NF-------PDLA--------------------DVI--ECHHASLERDVRRDVEDRLKRG 313 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELR VV ++SLELGID+G+VDLV+ ++TP V+ LQR GRAGH + +S+G+ Sbjct: 314 ELRAVVCSTSLELGIDIGSVDLVVMMSTPKGVSKALQRAGRAGHNIRSISRGILMATNIS 373 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 DLV+S V A +L+N+ P +PLDVLAQ V+ + + + +R+A P++D Sbjct: 374 DLVESCATVLLSRARQLDNVRMPESPLDVLAQHVVSMGCTEHWTRTDALALIRKAYPFRD 433 Query: 495 LPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 L +FD LD L+G S +S K+V + + G T + + + G IP+ Sbjct: 434 LDAGMFDDVLDYLAGGGASLRQRYSEVFGKIVLDAD-GFRTREGRVRREFLQNIGVIPNV 492 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 G V + +R +G ++E + + ++ D+ + R+++IT+ + VT A G Sbjct: 493 GQVQV-------RTKTRLLGSVEESFIRQIKIGDVFMIAGRPVRLEKITQMEAWVTKADG 545 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG--TIPPWLAE--ENTIANIQGL 668 +P W + + I F L AF G + W+A+ + AN + L Sbjct: 546 ALPTVPRWNANKMPLSNRVAQEINAFRKELR-AAFEEGRKDVDKWIAKRLDCGKANAEIL 604 Query: 669 IEE---QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 ++ Q + I LV E +E G HS GR ++ A I R+ Sbjct: 605 LKTHLAQHELSEIPTADFLLVEELEDEEQGALHYFFHSLIGRTSNDALARVITRRLSEAR 664 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G +A D G V + + L PE + + EA+ S + FR A Sbjct: 665 GGNAIATPHDYGFVLTVAKRQRFVEADFPRLLSPEGFDEALDEALRQSDMLKYHFRNAAQ 724 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERL 844 L++ + + + + A + + Q + P+ ++ E R+ LQ D Sbjct: 725 TGLMVYRNYFDRQKSVRKLQWSAEVIFNVLQQHEPEHVLMREARRDALQTFIDAEGAREF 784 Query: 845 MRRLNGGEIQISDVTTTTPSPFA 867 + +++ V P FA Sbjct: 785 LIAQTRKPVRLRRVPMVPPLSFA 807 >UniRef50_Q46BX9 ATP-dependent RNA helicase n=4 Tax=Methanosarcinaceae RepID=Q46BX9_METBF Length = 955 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 260/907 (28%), Positives = 413/907 (45%), Gaps = 132/907 (14%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F +PT Q +++ +H L+IAPTGSGKT +A L D + ++ E RK Sbjct: 22 GFTKPTEPQERSFPHIMDGKHTLLIAPTGSGKTESAVLPVFDNILKKKPE------ARKG 75 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 LYI+P++AL D+ ++I L + D ++V +R GDTP ER + ++ Sbjct: 76 ISALYITPLRALNRDMLSRIEI-LGQLLD-----------IKVQVRHGDTPQSERQRQSK 123 Query: 146 NPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 NPPD+LITTPE+L M T SR R+ L V V+IDE+H +AGSKRG LA+ LERL + Sbjct: 124 NPPDVLITTPETLQAMFTGSRLRQNLETVTHVVIDEIHELAGSKRGTQLAVGLERL-VEI 182 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIRIVVPVAN------MDD 257 QRIGLSATV + +++ FL G+ R TV+ ++ + +V P + + Sbjct: 183 SGEFQRIGLSATVGNPWEISKFLAGNGRDFTVIEVALLKLLEFDVVNPQVSEKGKIREKE 242 Query: 258 VSSVASGTG-EDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 V +A G E A I +E +ST++F N+R AE L A +L Sbjct: 243 VLKIAKAVGCEPEFASHLLCIRKIVEDS--------QSTLIFVNTRQSAEALAAGFRKL- 293 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 SI V HHGS+S E R E+A KSG L Sbjct: 294 ------GTSIGV--------------------------HHGSLSFEARVEAEEAFKSGAL 321 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 + ++ TSS+ELGID+G VD V+Q +P V+ LQR+GRAGH++ VS+G D Sbjct: 322 KGLICTSSMELGIDIGNVDRVVQYGSPRQVSRLLQRVGRAGHKLHSVSRGTIVSMEVDDT 381 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD--ALQVDEWYSRVRRAAPWKD 494 +S I + GR+E ++P LDV+A Q +A MD +++D+ ++R P++D Sbjct: 382 AESMAITKAALEGRVEEVSPHIKSLDVVANQ-IAGMVMDFGEIEIDKILRILQRTYPFRD 440 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE-TGILTARPGAQLLAVTSGGTIPDRG 553 L +D + GD+ KL+W+ + + I+ R ++ + IPD Sbjct: 441 LQLEELQRVVDQI------GDY-----KLIWHEKGSNIVKRRRKSREYYYENLSMIPDEK 489 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQIT-----RDQVIV 607 Y + + + VG LDE V + I WR+ ++ +D++ V Sbjct: 490 KYEIY-----DIVSGKSVGVLDEAFVVNFAEPGAIFITKGYMWRVVEMPDREQGKDRIKV 544 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--------DGAFFSGTIPPWLAEE 659 P G + +P W GE P E+ + +G +A D A + Sbjct: 545 EPVEG-TGEVPSWTGEEIPVPFEVAQDVGKLRAEIAAFIRAELDDDAIAEQLQAKYPVTR 603 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 N + + L+ E +P + +V+E DE GD + L++ +G + A + Sbjct: 604 NAVLELIRLVREHVEGGFPLPDAETIVIE---DE-GDA-VTLNACFGHNTNGTLARVLTS 658 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL-FEPEKLLQIVREAVGSSALFAA 778 + A +G+ + I +P G + L PE + I+ + ++ L Sbjct: 659 LLSARFGSSVAQEVDPYRIKLTLPRRVGSFQIRDMLLSLRPEHVEPIIEMTLKNTTLMKW 718 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 + AR R + R+ +LLEI QG + E +RE D+ D+ Sbjct: 719 KMVHV-ARKFGALSRDIDY------DRISMKKLLEIYQGSSMYD---EVIREIFHDLLDV 768 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD--APLAERRASVLSL 896 P + ++++L GEI V + P+P + A F + D AP R+ VL+L Sbjct: 769 PRTKEVLKKLAAGEIS---VEVSLPTPIGS-------AGFAMKKDLVAPEKADRSIVLAL 818 Query: 897 DSELLRN 903 ++ + Sbjct: 819 KERIMND 825 >UniRef50_D2EE81 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE81_9EURY Length = 899 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 236/848 (27%), Positives = 388/848 (45%), Gaps = 135/848 (15%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 F + T +Q ++ + APTG GKTLAAFL LD+L + E + Sbjct: 17 FTELTEIQKAVIPKIKEGKNIIFRAPTGYGKTLAAFLPLLDKL-KPDAEGIQ-------- 67 Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 +LYI+P+K+L D+ K I + + G + V IR GDT A ER+ Sbjct: 68 -LLYITPLKSLNRDI-------FKNIINISNKMG-----IEVDIRHGDTTAYERANQATM 114 Query: 147 PPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 PP LITTPE++ ++L+ R E L+ ++ VI+DE+ ++ SKRG ++ LERL + Sbjct: 115 PPHCLITTPETVQSILLSKRLVEKLKNLKYVIVDEIQSLMESKRGTQFSVGLERLRRI-- 172 Query: 206 TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT 265 + Q +G+SAT+ + +L + V + I + P N +D VAS Sbjct: 173 ANFQIVGISATISDFKETKEYLSAEESVEF---SGDKEYDIEVTYPSFNNED-EEVAS-- 226 Query: 266 GEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS 325 +++ + + YI +E+ + +STI+FTN+R AE L +RL ++ + Sbjct: 227 -KENVSKLVANSLRYIS----EEIKKSKSTIIFTNTRETAELLGSRL-----SKFLKDKK 276 Query: 326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSL 385 + V HH S+SKE R E A K G++ ++ATSSL Sbjct: 277 MEV--------------------------HHSSLSKEVRMEIENAFKIGDIDLMIATSSL 310 Query: 386 ELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC 445 ELGID+G VDLVIQ +P V +QR+GR+ H G++KG D ++S I C Sbjct: 311 ELGIDIGNVDLVIQYMSPRQVIKLIQRVGRSNHNQLGIAKGKLVTINIDDYLESKAIDNC 370 Query: 446 MFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 +LE ++ P LD+LA Q V + +E + V+++ +KDL + FD +D Sbjct: 371 RLKRKLEVISLPVESLDILAHQIVGLIIDGVQKNEEIFKVVKKSYAYKDLKKEKFDQVID 430 Query: 506 MLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK 565 L Y ++ ++ R G L + + +IP++ Y V+ + Sbjct: 431 FLIKHY-----------MIRYYGDTLIRTRKGL-LFYINNISSIPNKKSYVVI-----DS 473 Query: 566 AGSRRVGELDEEMVYESRV--NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE 623 ++R+G LDEE V E+ N+ I G +W+I +I ++ VT +P W GE Sbjct: 474 LLNKRIGVLDEEFVAENAKPGNNFIMRGE-NWKIIKIENQKIEVTRTNSNIGAIPAWEGE 532 Query: 624 GNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSR 683 + E D E + L E++ N ++P S+ Sbjct: 533 LMPVYRFVAEEAADL-------------------REKYSSKFSVLKEQKENF--VIPNSK 571 Query: 684 HLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDD----GIV 739 +V+E+ D +++HS +G +E A A+ +I + G SV++ D I Sbjct: 572 RIVVEKVDD-----YVVIHSTFGSMTNEAIAKALTSKITEIIG--ESVISKIDPYRITIK 624 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 +P K+ D I L + EK ++E + ++L+ RF A R ++ Sbjct: 625 THLPAE--KIKDLIINLNDLEKR---IKENIKRTSLYEYRFLNIAKRFGVI-----NKYA 674 Query: 800 PLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVT 859 + RLR+ L+E+ Y + + ET +E D+ + E +++++N GEI I V Sbjct: 675 DFTKIRLRS--LIEL---YDNSILEEETFKEIFSSKVDIKSAEDILKKINSGEISIV-VN 728 Query: 860 TTTPSPFA 867 SP A Sbjct: 729 DGEASPLA 736 >UniRef50_Q0W7D8 ATP-dependent RNA helicase n=3 Tax=Euryarchaeota RepID=Q0W7D8_UNCMA Length = 937 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 251/917 (27%), Positives = 400/917 (43%), Gaps = 129/917 (14%) Query: 29 QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI 88 +PT Q + H L+IAPTG+GKT +A L A D L R E+ R+ ++ Sbjct: 23 EPTGTQQKAIPAILSGGHVLLIAPTGTGKTESALLPAFDLLMRMSSEE------REGIKV 76 Query: 89 LYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPP 148 LYI+P++AL D+ + R R ++L + +R GDT ER + PP Sbjct: 77 LYITPLRALNRDMMK------------RMRWWAGRLDLNIDVRHGDTTTHERRRQALKPP 124 Query: 149 DILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS 207 DILITTPE++ ML SR RE L+ + VI+DEVH +A SKRG +A++LERL +T Sbjct: 125 DILITTPETVQAMLMGSRMRENLKSLAMVIVDEVHELASSKRGTQMAIALERLGR--YTE 182 Query: 208 AQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTG 266 +RIGLSATV + +VA FL G R +V + + P ++ S Sbjct: 183 FRRIGLSATVGTPGEVAKFLAGTGREAQIVEVKLAKSLDFHVTYP-------ETIDSDKP 235 Query: 267 EDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSI 326 + I I T ++D + R+RST++F N+R AE + AR +L A I Sbjct: 236 LSKKLLTDPDIAAQIRT-MIDLIKRNRSTLMFVNTRQSAEAIGARFRKLDQA-------I 287 Query: 327 AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 AV HHGS+SKE R E + K G++ +V TSS+E Sbjct: 288 AV--------------------------HHGSLSKEARIEAEDSFKDGKVNALVCTSSME 321 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM 446 LGID+G +D VIQ +P V+ LQR+GRAGH +G S G D ++ I Sbjct: 322 LGIDIGDIDHVIQYMSPREVSRLLQRVGRAGHSIGETSSGTIITINEDDSAEAWAICRRA 381 Query: 447 FAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 AG++EN+ D LA Q A A + Y V +A P+ L R+ FD L Sbjct: 382 SAGQIENINLYKKSYDALANQICAMALEYGDISATYVYETVCKAYPYAQLSRKEFDRVLQ 441 Query: 506 MLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK 565 L +L++ G++ + + + IPD + V + Sbjct: 442 QL-----------VEERLIFLSPEGLIGRKAKTRTYMYENLSMIPDEKRFDVY-----DV 485 Query: 566 AGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 R +G LDE V + V I WRI ++T D+V V P +P W GE Sbjct: 486 ITGRMIGTLDEAFVVNFADVGAIFITKGEMWRIVEVTEDRVRVEPIENPQGEVPSWTGEE 545 Query: 625 NGRPAELGEMIGDFLHLLADGA---------FFSGTIPPWLAEENTIANIQGLIEEQRNA 675 P + +G +A+ A + + P +E T + +++Q Sbjct: 546 IPVPFSVAMEVGAIRRTVAEMAGSPEADIVRYLTSAYP---TDEATARSYVRYVKKQVAG 602 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 VP + + +E + I++++ +G +V+E + + + +G ++ Sbjct: 603 NYPVPSDQLVTVEE-----EERTIMINACFGHKVNETLGRVVTALLASRFGGGVAMEIDP 657 Query: 736 DGIVARIP------DTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 I +P D + D EP I+ + + ++ L + AR Sbjct: 658 YRIKLELPKRIRAADVAKMIADLEPIFVEP-----IIEKTLKNTLLLKWKMVH-VARKFG 711 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 R + +R+ +LL + +G P + E + E L D D+ +++ ++ Sbjct: 712 ALSRDVDY------ERISMEKLLNVFEGTPMYE---EAVNEILHDKLDIDNAIKVLEKIR 762 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN--LLGQ 907 GEI+ V T SP + G E M AP + R+ VL+L ++ + +L Sbjct: 763 SGEIK---VLTGRLSPIGDAGFTGG-RELM----APESADRSIVLALKERIMNDHVILFC 814 Query: 908 VDPGELLDPQVIRQVEE 924 ++ + + ++ VEE Sbjct: 815 LNCKQFSSKRKVKDVEE 831 >UniRef50_Q649R1 ATP-dependent helicase n=4 Tax=environmental samples RepID=Q649R1_9ARCH Length = 961 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 255/884 (28%), Positives = 382/884 (43%), Gaps = 120/884 (13%) Query: 10 LLPDVFS----PATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA 65 L P+++S P + + F PT Q + ++ L+IAPT SGKT AA L Sbjct: 3 LEPNIYSLFSNPIQKAIAEKGFSYPTEPQTRAIPYITEGKNVLLIAPTASGKTEAALLPV 62 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 LD L R + ++LYI+P+KAL D+ LQ K ++ Sbjct: 63 LDALIR--------TERGAGIKVLYITPLKALNRDMLERLQWWCK------------RLD 102 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAV 184 LR+G+R GDT +ER PPDILITTPE+L ++ R R+ L V+ VI+DEVH + Sbjct: 103 LRLGVRHGDTSNREREAQAMAPPDILITTPETLQAIIPGRIMRQHLAVVKWVIVDEVHEL 162 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRH 243 A KRG AL+LERL L Q IGLSAT+ S VA FL G +R ++N P R Sbjct: 163 ACDKRGTQFALALERLRYLKKAEFQVIGLSATIGSPDRVAKFLVGTERECEIINVPVARS 222 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 + + P A+ D E+ + E + + +++E H+ST++FTN+R Sbjct: 223 IAVEVFYPRADSADYK-----LAEELYTYPEVAARLQLMKKLVEE---HKSTLIFTNTRS 274 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 + E L +R RV + F+ HHGS+SK Sbjct: 275 ITEILGSRF------------------------------RVWDLN-FLVGVHHGSLSKPS 303 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R E+ +K G+L+ ++ TSSLELGID+G +D VIQ +P V LQRIGR+GH++GG+ Sbjct: 304 RLNVEKGIKDGKLQGIICTSSLELGIDIGRLDFVIQYNSPRQVTRLLQRIGRSGHRIGGI 363 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEW 482 + G + D ++S VI LE P PLDVLA Q A +E Sbjct: 364 ANGAIVVQDSDDALESLVICRKALIDDLEPAGIPERPLDVLAHQIAGLLMAQGRWSFEEA 423 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYP-----SGDFSAF-RPKLV---WNRETGILT 533 + +++A P++DL + + L+ + R P S + F RPK + +N L+ Sbjct: 424 LALIKKAYPYRDLEEQELVSVLNYMHSRIPRLLWFSAEEKVFIRPKQIKPLYNYYFEHLS 483 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGA 592 P + V P VG LDE V E ++ + G Sbjct: 484 MIPEVRQFLVIDDDDKP--------------------VGVLDEAFVAEYAKAGNKFIEGG 523 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRP----AELGEMIGDFLHLLADGAFF 648 W+I + D++ V + +P W GE P E+G++ G L G Sbjct: 524 RVWKILHVYGDRIYVKHEDDPTGAIPSWVGEEIPVPYPVANEVGKIRGGLEEELESGKAV 583 Query: 649 SGT----IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSP 704 + + + E TI + EQ VP + L LER + IIL Sbjct: 584 AEIGKELVQRYSCSEQTITRALDEVIEQEKGGYPVPTDKLLTLERWNE-----YIILQCS 638 Query: 705 YGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL-FEPEKLL 763 +G V+ A+ +A I GA V I+ R AI L + Sbjct: 639 FGLLVNRTLAMILATVISDKIGAPVGVQQDPYRIMLRTESELEPEEVEAIILALSTGAIE 698 Query: 764 QIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPV 823 ++ +++ S LF RF A R + + L L + + + V Sbjct: 699 KLAIDSLVRSRLFKHRFIHVARRFGAIVKKAS----------LSDLDLDNLIRSFEGSAV 748 Query: 824 ILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFA 867 E +RE D+ L++++N GE++IS + SP A Sbjct: 749 FNEAIREAQDKDVDIKQTVGLLKQINEGELKISVLKGDDVSPVA 792 >UniRef50_A1RT46 DEAD/DEAH box helicase domain protein n=5 Tax=Thermoproteaceae RepID=A1RT46_PYRIL Length = 916 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 261/842 (30%), Positives = 374/842 (44%), Gaps = 129/842 (15%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 + PT +Q + H L+IAPTG GKT AA + ++ E Sbjct: 18 GYLTPTPIQTEGIPRILSGSHVLLIAPTGFGKTEAALFPIISKMI--------ETSNVSG 69 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 R +YI+P+++L D+ R L +AD V L + IR GDT +ER + Sbjct: 70 IRCIYITPLRSLNRDLLRRLY----ALADA--------VGLSIAIRHGDTTQKERKAIAV 117 Query: 146 NPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 PPDILITTPESL ++L R RE LR V VI+DE+H + SKRG LA+ LERL L Sbjct: 118 RPPDILITTPESLQILLLHRKLREHLRNVRFVIVDEIHELINSKRGVQLAIGLERL-VEL 176 Query: 205 HTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS 263 QR+GLSATV + VA FLGG R V +V+ + +I V+P+ + +D Sbjct: 177 AGEFQRVGLSATVGAPQLVADFLGGVGRKVEIVDVSGEKRLEIDTVLPMPSEEDHIDAEK 236 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS 323 R I Y+ + + ++FTN+R AE L ++L Sbjct: 237 FDVTPETLARIRKIAEYLRSS-------KGAVLIFTNTRDGAEFLASKLR---------- 279 Query: 324 PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 SI D+ HH S+S+E R E+ LK G L+ VVATS Sbjct: 280 -SILGDSVEV---------------------HHSSLSREHRISVEERLKKGRLKAVVATS 317 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV 443 SLELGID+G +DLVIQ +P V+ +QR+GR+GH + +S+G+ DL+++ VIV Sbjct: 318 SLELGIDVGHIDLVIQYGSPRQVSKLVQRVGRSGHGLDKISRGIIVASDFEDLLEAEVIV 377 Query: 444 ECMFAGRLENLTPPH-NPLDVLAQQTVAA---AAMDA--LQVDEWYSRVRRAAPWKDLPR 497 E GRLE H N LD+L Q V A +D + +D VRRA P+++L Sbjct: 378 ERALKGRLEEEVEYHENALDILLHQIVGIALEAKVDGKEINLDYILKVVRRAHPYRNLTE 437 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 LD A R KL+ L R + + TIPD Y Sbjct: 438 EDIRLVLDF-----------AERHKLLRG-----LKPRRHSIRYYFENVSTIPDEKSYKA 481 Query: 558 LLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 L +E G R VGELD E VY I L W + D V + P L Sbjct: 482 L----DETTG-RIVGELDSEFVYSIEPGTKIVLSGRVWVFSRKENDAVYLYPDFDVKGAL 536 Query: 618 PFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA-NIQGLIEEQRNAT 676 P W GE P E+ + + + + LA EN + +++GL E Sbjct: 537 PAWLGEQIPVPYEVAQEV---------CIRRAEVLQKALAGENELGLDLEGLEAE----- 582 Query: 677 GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDD 736 +VP L + +G+ ++HS G + +E + ++ HAL G V D Sbjct: 583 -LVPTPERLHIH----VLGNKYAVIHSCLGTKGNEALGLYLS---HALSGYVGPVGYRSD 634 Query: 737 GIVARIPDTDGKLPDAAI---FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 + D +P AI F E + + +R A+ +S +F RF + A R ++ Sbjct: 635 AYRVLLIFRD-YVPINAIEEVFRKPQEFVYRTLRNAIKNSKIFRYRFLQVARRVGIVS-- 691 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEI 853 P ++L+EI Y D LETL E + D+ A+ L+ +L+ G I Sbjct: 692 KDAQEIP--------TKLIEI---YLDDLPGLETLNEMFVERVDVKAMISLIEKLSNGRI 740 Query: 854 QI 855 I Sbjct: 741 PI 742 >UniRef50_A8M9R8 DEAD/DEAH box helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M9R8_CALMQ Length = 926 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 253/870 (29%), Positives = 393/870 (45%), Gaps = 122/870 (14%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 +++PT VQ + EH L+ +PTG+GKT AA L L + G R+ Sbjct: 21 GYEKPTKVQELAIPIVLTGEHTLISSPTGTGKTEAALLPVLSMMLNSG--------VREG 72 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 RILYI+P K+L D++ +R RR + + L + +R GDT + ERS+ R Sbjct: 73 IRILYITPAKSLNRDLE------------QRIRRLSSLLGLTIAVRHGDTTSSERSRQRR 120 Query: 146 NPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 NPP ILITTPE+L ++L S R LRGV VIIDEVH + GSKRG LA+ LERL L Sbjct: 121 NPPQILITTPETLQILLVSPVMRNWLRGVGWVIIDEVHELLGSKRGVQLAVGLERL-VEL 179 Query: 205 HTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS 263 QRI LSAT+ ++ +GG R V +VN ++DVS Sbjct: 180 AGEFQRIALSATIGDLELASSLVGGVGRGVRIVN-----------------VNDVSRTME 222 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHR-STIVFTNSRGLAEKLTARLNELYAARLQR 322 T H R S I + V R+ S ++FTN+R +AE L L ++ Sbjct: 223 LT---IHYLRPDSDIEEAARRISEVVNRYGGSVLLFTNTRDMAELLGTELKKV------- 272 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 + +V+ HGS+S+E+R E+ L++GE++ VV+T Sbjct: 273 ---------------------INGVEVY-----HGSLSRERRETVEEGLRNGEVKVVVST 306 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SSLELGID+G+++ VIQ +P +QR+GR+GH+VGGV+KG F T D ++S V+ Sbjct: 307 SSLELGIDIGSIEAVIQYMSPKQSDRLIQRVGRSGHEVGGVAKGHVFTVTPDDYLESLVL 366 Query: 443 VECMFAGRLENLTPPH-NPLDVLAQQTVAAAAMD---ALQVDEWYSRVRRAAPWKDLPRR 498 G LE P H +DVL Q +A +D ++ V++ Y ++RA P+ L Sbjct: 367 ARRAIEGELEGDYPYHAGAMDVLLHQ-LAGIILDHGGSVTVNDAYRIIKRAHPYSSLQ-- 423 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 LS +FS+ KL+ N + G+L R G ++ + + IPD + + Sbjct: 424 --------LSDLMRLIEFSSRELKLIGNYD-GVLRNRRGLRIYYLQNVSMIPDERRFKAV 474 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS--AR 616 +GELDE+ N +I L WR+ I +D+ ++T RS Sbjct: 475 -----NYMDKSTIGELDEDFALTLEQNKVIVLAGRLWRVLTIDKDEGVITLDELRSGEGE 529 Query: 617 LPFWRGEGNGRPAELGEMIGDF-LHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNA 675 LP W G+ E+ + + LLA G+ S + NI L+E+ R Sbjct: 530 LPEWIGDEIPVSYEVAQEVCRLRRRLLAGGSLSS-------FNRIKLMNINELLEDVREL 582 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 + + G V E E I++HS G + +E + + G + S V Sbjct: 583 SSDLRGKYPDVNETL-IEYSSNLIVIHSCLGTKGNEALGLYLTGYLTGRLALSISYVRDP 641 Query: 736 DGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTP 795 ++ + P + + + + +R + +S L+ RF A R ++P T Sbjct: 642 YRVIIKTPRPINPEIIRRALQEDVDTVEETLRNVIKNSNLYRYRFIHVARRMGVLPKGTI 701 Query: 796 GHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQI 855 + +L ++ Y + + E + E D DL AL R + + G I++ Sbjct: 702 D---------VNVDRLTKV---YNESVLDNEVINEIEVDKLDLDALRRFINGIKDGVIKL 749 Query: 856 SDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 + PS A ++ G + + P Sbjct: 750 -NFLARKPSKLALMVMGGLGTRSIITDEVP 778 >UniRef50_A8MBG3 DEAD/DEAH box helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBG3_CALMQ Length = 970 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 252/883 (28%), Positives = 391/883 (44%), Gaps = 122/883 (13%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R F++ T Q + V ++ L+IAPTGSGKT AA L L + R + Sbjct: 25 RGFRELTEPQLKAIPVILSGKNTLLIAPTGSGKTEAALLPVLSMYLNMPQDKPRGIY--- 81 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 ILYI+P++AL D+ R ++ G V L V +R GDT ER++ + Sbjct: 82 ---ILYITPLRALNRDLLRRIEWWASG------------VGLTVAVRHGDTDKNERARQS 126 Query: 145 RNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 RNPP +LITTPE+L L + SR RE + V+ VI+DEVH + KRG+ L++ L++L A Sbjct: 127 RNPPQLLITTPETLQILFIGSRLREHISKVKWVIVDEVHELVEDKRGSQLSIGLQKLKA- 185 Query: 204 LHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS--- 259 L Q IGLSA+V S S+VA FL G D V+N R+ Q ++ P ++ + Sbjct: 186 LAGRFQVIGLSASVGSPSEVAKFLVGNDEECEVINLSFTRNYQFDVINPAVSLSNADINE 245 Query: 260 -----SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + + D + ++D+ +S+IVF N+R +AE LT+R+ Sbjct: 246 LKARYMIVNNINADELFHNDALARLLYVMNLIDD--GGKSSIVFVNTRSMAELLTSRI-- 301 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 L +P+ V HH S+S+ R TE+ L+ G Sbjct: 302 -----LMINPTYPVSI------------------------HHSSLSRVNRLNTEEMLRGG 332 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 L+ VVATSSLELGID+G VD VIQ +P V +QR+GR+GH++ V KG+ Sbjct: 333 RLKAVVATSSLELGIDIGHVDQVIQYVSPHQVTRLVQRVGRSGHRLDKVPKGIIITEDIN 392 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRRAAPWK 493 D +++ IV AG LE P P DVL Q V+ M VDE + V+ A P++ Sbjct: 393 DTLEAIAIVNRARAGWLEPTKSPEKPYDVLFNQIVSLILMKPRWTVDEILNIVKGAYPYR 452 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA-------QLLAVTSG 546 +L R A L +S RP+LV+ E + +P + + + Sbjct: 453 NLTRDELIAVLRFMS--------EGLRPRLVYFIEEEGVVLKPRSPRSRIELREYFFNNL 504 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI-ITLGATSWRIQQITRDQV 605 IP+ Y V + E VG LDE + E I W ++ I D + Sbjct: 505 SMIPEEKQYLVTRVDTGEV-----VGVLDEAFMAEYGEPGIKFVFRGNVWILRSIKDDVI 559 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------GAFFSGTIPPWLA 657 V PA +P W GE P E+ + +G ++ D A S Sbjct: 560 YVEPAKDPVGAIPSWIGEEIPVPFEIAQDVGRLKRIITDELRNGASEDALISRLTKELGV 619 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 T+ I I+EQ G VP +++E+ +G+ +++H+ +G V+ + + Sbjct: 620 SRRTVKYIVSTIKEQLK-YGFVPTDDSIIIEK----VGEL-VVVHASFGTLVNRTLSRLL 673 Query: 718 AGRI-HALWGADASVVASDD--GIVARIPDTDGKLPDA------AIFLFEPEKLLQIVRE 768 A + HAL D V D I+ ++P G P A+ + +Q ++ Sbjct: 674 ASYMTHAL---DLPVRVQQDPYAIILQLPSKVG--PGIIIESLRALANLSMSEFIQYIKR 728 Query: 769 AVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETL 828 + LF + A R ++ + + L + Q PV +E L Sbjct: 729 IALETGLFKRKVVHVARRFNVIKS----------DKSVSDISLTNLIQALEGTPVYVEAL 778 Query: 829 RECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 RE + D+ R+++ + G I++S + + SP A +L Sbjct: 779 REFITSDLDVDGAVRVLKSILDGTIKVSVIEGSEFSPMAREIL 821 >UniRef50_B1Y9J8 DEAD/DEAH box helicase domain protein n=5 Tax=Thermoproteaceae RepID=B1Y9J8_THENV Length = 937 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 260/893 (29%), Positives = 400/893 (44%), Gaps = 125/893 (13%) Query: 8 SSLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 SS++ + P R+ R +PT Q + LVIAPTGSGKT A L L Sbjct: 9 SSVVFHLLHPLLREALKDRGISEPTEPQRMAIPEILAGNNVLVIAPTGSGKTETAMLPIL 68 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 ++ EGG + + +LYI+P++AL D + D R GE V Sbjct: 69 SKML-EGGVEKPGIY------VLYITPLRALNRD-----------LLDRIRWWGE-RVGF 109 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVA 185 RV +R GDT +R + ++ PP ILITTPE L ++T R E LR + V++DEVH +A Sbjct: 110 RVDVRHGDTDKADRQRQSKTPPHILITTPEMLQAIMTGRRLLEHLRELRWVVVDEVHELA 169 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHP 244 KRG L+++LERL + Q +GLSATV S +VA FL GD RP VV R+ Sbjct: 170 EDKRGVQLSVALERLRYHVGRDFQIVGLSATVGSPVEVAKFLVGDGRPFKVVLVSFARYM 229 Query: 245 QIRIVVPVANMDDVS-SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 ++ + P + +D + SG D A R I +E +RST+VF N+R Sbjct: 230 KLDVARPKPDEEDHKIAEVSGLFPDVVA-RLRYIKRLVE--------ENRSTLVFVNTRS 280 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 +AE L R ++L+ +D+ IA HH S+SK Sbjct: 281 MAELLGFRFSQLF------------------------------NDLPIA-VHHSSLSKMV 309 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R E+ LK GEL+ VVATSSLELGID+G VDLV+Q +P V LQR+GR+GH++ V Sbjct: 310 RISVEERLKKGELKAVVATSSLELGIDIGHVDLVVQYISPHQVTRLLQRVGRSGHRLTSV 369 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEW 482 +G+ D++++ V+V+ +G +E P P DVL Q VA + +++E Sbjct: 370 PRGVVVGEDINDVIEAVVVVKRARSGLVEPTQIPRKPYDVLVNQVVAFLMLKPRWRLEEL 429 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARP---GAQ 539 + ++RA P++DL + ++ Y P+L + E + ARP G Sbjct: 430 HQVIKRAYPYRDLTIEELRRVVKFMNDLY---------PRLAFYYEDSDVVARPRGRGFY 480 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQ 598 + IPD Y+V+ EK G VG LDE V E V W I Sbjct: 481 RYFYETLSMIPDERQYAVV----NEKTGE-LVGTLDESFVAEYGNVGVKFIFRGRPWLIT 535 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAE 658 I + V + +P W GE P E+ + +G L A G + Sbjct: 536 GIEERSIKVVEVSDPTGAIPSWIGEEIPVPYEVAQEVG-LLRRRAQGGDHRAIAEEYGVN 594 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 E+ I +EE G +P + +V+E+ R+ + +I+H+ +G +V+ + Sbjct: 595 EDVARYI---VEEMSKHRGPLPDDKTVVIEQFRENV----VIVHAAFGTQVNRTLGKLVG 647 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLL---------QIVREA 769 + + GI+ + + P AA + E + L ++++ A Sbjct: 648 ELLIKALEKPVGIHQDPYGIIIQSAE-----PLAAELVGEQLRRLATLDVREIAELLKSA 702 Query: 770 VGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLR 829 + S F R A + + + + S+L+E G F E LR Sbjct: 703 LVKSGSFKRRILHVAKKMGAVDKDADVYSVSM-------SKLVEAFSGTVVFD---EALR 752 Query: 830 ECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQS 882 E L+ DL +++R+ GEI + V + +P+ Y+ E +Y+ Sbjct: 753 ETLERDLDLEHTVDVIQRMRNGEIAV--VYSASPT---------YLGEVLYEK 794 >UniRef50_B1ZZM6 DEAD/H associated domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZM6_OPITP Length = 900 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 263/934 (28%), Positives = 395/934 (42%), Gaps = 157/934 (16%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF R F + Q L+ +PTGSGKTLAAFL D L R D E Sbjct: 27 WFRRRFAHFSPAQLHAVPEVLAGNSLLLTSPTGSGKTLAAFLSVFDWLAR--ARDRGELP 84 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 + +Y+SP++AL D+++NL P++ + + LRVG RTGDT ER+ Sbjct: 85 NGIVA--VYVSPLRALAYDLRKNLAEPVRELGWDW---------LRVGARTGDTSPAERA 133 Query: 142 KLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 R PP I +TTPESL LML+ +I DE+HA+A +KRGA LA++ ERL Sbjct: 134 AQRRKPPHIFVTTPESLTLMLSQPGWIAAFTSTRFLIADELHALAENKRGAMLAVAAERL 193 Query: 201 DAL-------------------------------LHTSAQRIGLSATVRSASDVAAFL-G 228 + + RIGLSATV VAAFL G Sbjct: 194 EEFPIAERRSPNVPAPPPHVPGDPTASSQSAIENQKSKIIRIGLSATVAPLETVAAFLVG 253 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP--YIETGIL 286 RP + + +I + P+ RE + P Y T +L Sbjct: 254 PGRPCRIAEVTQTKPAKIEVFSPL--------------------REHAYPPAGYTATRVL 293 Query: 287 DEVL----RHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN 342 E+ +H++T+VFTN+R AE + RL +L Sbjct: 294 AELSVLLEKHKTTLVFTNTRSGAESIGLRLKQL--------------------------- 326 Query: 343 RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT 402 R + SD+ HH S+ + R E LK GELR VV ++SLE+GID+G++D+V+ V+ Sbjct: 327 RPELSDLI--EVHHASLDRGVRLEIEDRLKRGELRAVVCSTSLEMGIDIGSIDVVVMVSA 384 Query: 403 PLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLD 462 P V+ LQRIGR+GH +G +S G+ DL + AV M LE + NPLD Sbjct: 385 PKGVSRALQRIGRSGHSMGRISHGILVASNINDLAECAVTARMMARRELEPVKIHENPLD 444 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFR 520 VLAQ V A + DE ++ VRR+ P++DLPR F+ L L G S ++ Sbjct: 445 VLAQTLVGLAIFGSETPDEAFALVRRSYPFRDLPRATFERVLRYLRGGGVSLERNYENVF 504 Query: 521 PKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY 580 K+ + ++ P + GTI M + L G R +G+++E + Sbjct: 505 GKVRVDASGQLVLTSPRVARSFYQNIGTINTESMVQIRL-------GRRNLGQVEESFMR 557 Query: 581 ESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE----GNGRPAELGEMIG 636 R D+ L R+ + V A +P W +G AE+ + Sbjct: 558 GLRPGDVFVLNGRCVRLVKTHLLSAQVVRADHALPTVPRWYANKMPLASGLAAEVVRLRT 617 Query: 637 DFLHLLADGAFFSGTIPP-------------WLAEENTI--ANIQGLIEEQRNATGI--V 679 + L S +PP WL E + AN + LI+ I + Sbjct: 618 EVAKRLGG----SAGVPPASGQPAGETPALSWLRSEYGLSAANARALIDHFSLQAQISAI 673 Query: 680 PGSRHLVLERCRDEIGD-WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI 738 P + ++ER R+ GD H+ GR ++ + +A R+ +L G +A V D G Sbjct: 674 PTAGVFLIERYRE--GDLLHYFFHALIGRSANDALSRIVAQRVQSLKGGNALVTIDDYGF 731 Query: 739 VARIPDTDGKLPDAAIFLFEPEKLLQIVRE--------AVGSSALFAARFRECAARALLM 790 + + + EPE +VR+ A+ ++L +FR A L++ Sbjct: 732 LLSLRSFQA--------MEEPELRTLLVRDGAEDALRLALADASLVKWQFRGVAQTGLMV 783 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLN 849 P R G + A + E+ + + PD P++LE E DLP + +++ Sbjct: 784 PRRVHGVERGTRMLQWSAEIIFEVLREHEPDHPLLLEAYAEATLRFLDLPRALGFLEQVD 843 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD 883 I D+ SPF+ + + E M D Sbjct: 844 RLRWDIRDLPRV--SPFSFGIYVSKIKETMTLED 875 >UniRef50_B5ICF6 DEAD/DEAH box helicase domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICF6_9EURY Length = 890 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 193/597 (32%), Positives = 291/597 (48%), Gaps = 85/597 (14%) Query: 29 QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI 88 +PT Q + ++ L+++PTGSGKT AA L +L G + A Sbjct: 20 EPTEPQREVIPYILEGKNVLLVSPTGSGKTEAAMLPIFHKLV--DGNYGKIA-------C 70 Query: 89 LYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPP 148 +YI+P++AL D+ LK + D ++ G LR+ +R GDT A ER +L+ +PP Sbjct: 71 IYITPLRALNRDL-------LKRLEDFGKKLG-----LRIAVRHGDTTAYERRQLSLHPP 118 Query: 149 DILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS 207 D+LITTPE+ +M L R +E+L+ V+ V+IDE+H +A +RGA LA+ LERL + T Sbjct: 119 DVLITTPETFQIMFLGKRLKESLKSVKFVVIDEIHELASDERGAQLAVGLERLRKM--TR 176 Query: 208 AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 Q IGLSA+V + ++A FL + + +V + + I P + + + G+ Sbjct: 177 FQVIGLSASVGNPEEIAKFLSPNESIEIVKVKLRKRIDVNIRAPQKKYEKEAQIM-GSDV 235 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 D +A +W +E+ + R+T+VFTN+R AE + R L+A +P I Sbjct: 236 D-YASTLMEMW--------EEINKARATLVFTNTRCTAEDIGMRYRLLFA-----NPPIE 281 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 V HHGS+S++ R E K GEL+ ++ TSSLEL Sbjct: 282 V--------------------------HHGSLSRKVRIEAEDKFKRGELKALICTSSLEL 315 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GID+G VD VIQ +P V LQRIGRAGH++ VS+G F T +L +SA I+ + Sbjct: 316 GIDVGIVDFVIQFNSPRQVTKLLQRIGRAGHRIDEVSRGTIFAHTPVELWESASILSLLH 375 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 GR+E++ PL VL Q VA A + + E Y ++ A P+++L F+ L+ Sbjct: 376 EGRIESVKIREKPLMVLINQLVAMANSEGKMNAREAYEIIKNAYPFRNLSFEEFEDILNF 435 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 + D VW R G + + IPD +Y V+ G+ Sbjct: 436 MK------DIGK-----VWYDGIAFGKTRGGREYF-YQNISMIPDEKLYKVITLHGD--- 480 Query: 567 GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE 623 +G LDE V + + +WRI I D+V+V A P W GE Sbjct: 481 ---FIGTLDESFVSTLNYGESFVMNGMAWRIVDIREDKVLVEYLRD-IAMPPSWVGE 533 >UniRef50_A3CUY2 DEAD/DEAH box helicase domain protein n=5 Tax=Methanomicrobiales RepID=A3CUY2_METMJ Length = 909 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 250/893 (27%), Positives = 385/893 (43%), Gaps = 138/893 (15%) Query: 12 PDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 PD+ P ++ R F +A Q Q E+ +++APTG+GKT +A L DRL Sbjct: 17 PDLLDPRVQEVVRKRGFTGFSAAQEQAIPRLLAGENLVLVAPTGTGKTESAMLPVFDRLL 76 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + G + LYI+P+++L D+ ++ + E+ L VG+ Sbjct: 77 KTTGSGFKA---------LYITPLRSLNRDILNRMEWWCR------------ELGLSVGV 115 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKR 189 R GDTP ER K NPPD+LITTPESL L + R RE L+ V+ V++DE+H +A SKR Sbjct: 116 RHGDTPQNERRKQALNPPDLLITTPESLQALFMGKRLREHLKNVKYVVVDEIHELADSKR 175 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 GA LA++LERL A QRIGLSATV + D+ FL G RP ++V Sbjct: 176 GAQLAVALERL-AAYAGEFQRIGLSATVGNPDDIGRFLAGHRPFSLVE------------ 222 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 VPVA+ D+ + +G + A G LD ST+VF N+R AE L Sbjct: 223 VPVASSLDIGVLFAGEDFGAQARAVGK--------CLDS---PGSTLVFVNTRVTAEALG 271 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 RL DV + HHGS+S++ R E+ Sbjct: 272 HRL-------------------------------YSRGDVEV---HHGSLSRDVRVDAEE 297 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 + GE+R ++ATSS+ELGID+G ++ V+Q +P V+ +QR+GRAGH++ +S+G Sbjct: 298 RFRKGEVRTLIATSSMELGIDIGHIEHVVQFGSPRQVSRLVQRVGRAGHRLDAISRGTVL 357 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 DL++S VI A E + PP DVLA Q VAA A++ +++ SRVR Sbjct: 358 ATGFDDLLESLVIARRAKANECERIVPPAGAADVLANQ-VAAIAVEYGEIE--VSRVREM 414 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGGT 548 + VFD +L D + R G R G A+ + + Sbjct: 415 IERSN----VFDGCGPLLD------DVCRQMAEHRLIRLDGTRIIRTGRARRYLIENLSM 464 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIV 607 I D + + R VG LDE V + WR+ +I ++ V Sbjct: 465 IHDEKKMEIF-----DMVSRRTVGTLDESFVLGWMHTGAVFITKGQLWRVLEIEGTRITV 519 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQG 667 PA +P W GE P + +G A G + AE G Sbjct: 520 EPATRAKGEVPSWEGEQIPVPFAVAREVGALRRTRAFGRYSDTPAAIAYAE-----RFMG 574 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 ++E VP R + LE D ++ + G + +E A A++ + A +G Sbjct: 575 RMDEGNYP---VPTDRLVTLEN-----ADEGVVCNVCGGHKANEALARALSVLLSARYGT 626 Query: 728 DASVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 + + R+PD L + EP+ L I++ A+ +ALF + + A + Sbjct: 627 SVGIEVGAYRFLLRLPDNVRALEVQETLAALEPDHLPGILKLALKRTALFKWKLVQVAKK 686 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 + +R +L+++ G + E RE D+ A + ++ Sbjct: 687 FGAIDADAD-------YERFSIHRLIDLFDGT---VIAAEAYRELFSISMDMDAAQEILA 736 Query: 847 RLNGGEIQI---------SDVTTTT----PSPFATSLLFGYVAEFMYQSDAPL 886 ++ G I + SDV +++ P P + G +A + + D L Sbjct: 737 AVHDGRIAVATGRLSPLGSDVLSSSRDMIPPPMVDQAVIGTLARRLEKEDVVL 789 >UniRef50_A2BMA9 DEAD/DEAH box helicase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMA9_HYPBU Length = 955 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 247/873 (28%), Positives = 383/873 (43%), Gaps = 137/873 (15%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 + +PT +Q + + R H L++APTGSGKT AA L A+ + G + Sbjct: 30 YIRPTEIQEKAIPLILRGNHVLIVAPTGSGKTEAALLPAMSSILPMRGFTGK-------I 82 Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 ++YI+P+++L D+ + K +A + V LR+ +R GD+ E+ + N Sbjct: 83 YVVYITPLRSLNRDIFARM----KSLA--------SSVGLRLEVRHGDSTELEKRRFLEN 130 Query: 147 PPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL-L 204 PP I+ITTPES Y +L+ + RE + ++ VI+DEVH + G KRGA L+L+LER +L + Sbjct: 131 PPHIMITTPESFYFLLSVEKFREAISELKYVIVDEVHELVGDKRGAELSLALERAISLYV 190 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP----VANMDDVSS 260 Q +GLSATV V L G R V +V R + +V+P N ++S Sbjct: 191 KGKVQLVGLSATVAEPELVVRKLFGSRYVRIVEASMARKYNVGVVLPSRDNTVNGLELSE 250 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHR-STIVFTNSRGLAEKLTARLNELYAAR 319 ED+ + V+R + S IVFTN+R AE + A L ++ Sbjct: 251 FNEELYEDTID----------RIAYIANVIREKGSVIVFTNTRDTAELIGALLKKVL--- 297 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 G S V HHGS+S+E R E+ + GE+ + Sbjct: 298 ------------------GENSIEV----------HHGSLSREHRLSIEERFRKGEIAAL 329 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF-PRTRRDLVD 438 VATSSLELGID+G V V+Q +P V +QR+GRA H+ G + G+ R D+++ Sbjct: 330 VATSSLELGIDIGHVGYVVQYLSPRQVVKLVQRVGRARHRAGEAAAGVVVASRNLFDVLE 389 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD--ALQVDEWYSRVRRAAPWKDLP 496 SAVI G LE L PPH PLD L Q VA ++ + + + Y V R Sbjct: 390 SAVIAARTSRGNLEKLKPPHAPLDALVHQ-VAGTVIENPGIDIGKLYLLVTR-------- 440 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR-----PGAQLLAVTSGGTIPD 551 SG Y DF F L + GI+ R PG + ++ T+ Sbjct: 441 -----------SGFYEGLDFDEFMAVLSYMEHAGIIRIRDGKLYPGRKCMSYYFNSTMIT 489 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 S+ P + +G +R+G LDEE V V + L W + + V V P+ Sbjct: 490 E---SIQYPVYDVVSG-KRIGLLDEEFVASLDVGEKFVLAGRVWEVVGFDENGVRVKPSS 545 Query: 612 GRSARLPFWRGEGNGRPAE--LGEMIGDFLHLLADGAF-------FSGTIPPWLAEENTI 662 P W EG+ P E + + L +G S T ++ E+ Sbjct: 546 EDRLIPPAW--EGDLIPVEHNVAREVASILRRFGEGHTEVLDMYPLSDTARRYVGEK--- 600 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 L++ R G +P R +++E D +++ G R ++ +A I Sbjct: 601 -----LLQAMRE-LGFLPHDRRILVEHYGDT-----YVVYVFLGSRGNKSLEYLLAYYIS 649 Query: 723 ALWGADASVVASDDGIVARIPD-TDGKLPDAAIFLFE---PEKLLQIVREAVGSSALFAA 778 + G + ++ IV ++P+ ++ L + I P L ++ EAV S L++ Sbjct: 650 QIKGYNVLSASTPYAIVLKLPERSEPGLVEMVIKRLAELPPSTLEEMYVEAVKKSRLYSW 709 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 A RA +P R P +R+ A QL G +E LRE +L Sbjct: 710 ILYRVAQRAGALPASRRA-RDPSMLKRVVA-QLANTILG-------VEALREFENRKGNL 760 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 ++ L+R + G + IS V+ PSP ++ Sbjct: 761 EVVKALLRDVGKGYVLISTVSRRNPSPLTEDII 793 >UniRef50_Q1QRK7 DEAD/DEAH box helicase-like n=6 Tax=Alphaproteobacteria RepID=Q1QRK7_NITHX Length = 853 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 256/912 (28%), Positives = 386/912 (42%), Gaps = 115/912 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 +AD + LPD F WF P A Q A AL+IAPTG+GKTLA Sbjct: 3 IADREEEQPALPDDFL----RWFAARRWSPRAHQLALLQKARAGRSALLIAPTGAGKTLA 58 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 FL L L E + + LYISP+KAL D+ RNL+ P+ Sbjct: 59 GFLPTLVELSCFPSPTGAEGSETRGLHTLYISPLKALAVDIARNLEAPI----------A 108 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 E + ++V RTGDTP R + R PPDIL+TTPE + L+L S A ++ V++D Sbjct: 109 EMTLPIKVETRTGDTPMLRRQRQRRYPPDILLTTPEQMALLLASDDAPFLFSSLQRVVLD 168 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 E+HA+ SKRG L+L+L +L L + IGLSATV +A FL V P Sbjct: 169 ELHALVTSKRGDLLSLALAQL-WRLAPRMRTIGLSATVAEPESLARFL--------VPQP 219 Query: 240 AMRHPQIRIVV------PVANMDDVSSVASGTGEDS-HAGREGSIWPYIETGILDEVLRH 292 + IVV P+ M D G + HA E I D + R+ Sbjct: 220 EGKIVSADIVVAGGAAAPIVEMLDTRERLPWAGHSARHALGE----------IYDLIRRN 269 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 R+T+VF N+R AE L +L+ RV + IA Sbjct: 270 RTTLVFVNTRSQAEML---FQDLW--------------------------RVNDDGLAIA 300 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 HHGS+ QR EQA+ G LR VV TSSL+LG+D G VDLVI + P + +QR Sbjct: 301 -LHHGSLDVAQRRKVEQAMTEGRLRGVVCTSSLDLGVDWGDVDLVINIGAPKGASRLMQR 359 Query: 413 IGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP--HNPLDVLAQQTVA 470 IGRA H++ S+ + P R ++++ V ++ + + TPP LDVLAQ + Sbjct: 360 IGRANHRLDEASRAVLVPANRFEVLECRVAIDAVNENAQD--TPPLRTGALDVLAQHVLG 417 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAF---RPKLVWN 526 A D+ Y VR AAP+ L R FD +D + +G Y + F R + Sbjct: 418 CACGAPFHADQLYDEVRTAAPYAALTRADFDDVIDFVATGGYALKSYERFARIRQDKANS 477 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLL-------------PEGEEKAGSRRVGE 573 E+ A P + + GTI + M V L G G R +GE Sbjct: 478 SESRWRVANPKVRQSYRLNVGTIVEEAMLKVKLVRSRHGGQNRGKGSTGTIARGGRMLGE 537 Query: 574 LDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGE 633 ++E + V D G R + + DQV V+ A S ++P + G L E Sbjct: 538 IEEYFIEGLVVGDTFVFGGEIVRYEVLVEDQVYVSRANDDSPKVPSYMGGKFPLSTYLAE 597 Query: 634 MIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDE 693 + + L + + WL+ ++ + VP +R +V+E Sbjct: 598 RVRNLLDDKRAWSSLPDQVRQWLSLQSHFSR--------------VPHAREMVVETF-PR 642 Query: 694 IGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI-VARIPDTDGKLPDA 752 G ++ + GR H+ + + R+ + VA++ + V + DT + Sbjct: 643 AGKHYLVCYPFEGRLAHQTLGMLLTRRLERMRVRPLGFVANEYALAVWMLGDTSSMIGQG 702 Query: 753 AI---FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 + LF+P+ L + + SAL FR CA + L+ R+ Q Sbjct: 703 RLNLDALFDPDMLGDDLEAWLAESALMKRTFRSCAIISGLIARRSTSDEKTRRQVLFSTD 762 Query: 810 QLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFAT 868 + ++ + + PD ++ + + D+ L ++ R+ G +I+ SP A Sbjct: 763 LVYDVLRKHQPDHLLLRAARTDAAAGLLDIRRLSDMLARIRG---RITHKPLDRISPLAV 819 Query: 869 SLLFGYVAEFMY 880 ++ E +Y Sbjct: 820 PVMLEIGREAIY 831 >UniRef50_O29116 Large helicase-related protein (Lhr-1) n=2 Tax=Archaeoglobaceae RepID=O29116_ARCFU Length = 892 Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 223/845 (26%), Positives = 382/845 (45%), Gaps = 112/845 (13%) Query: 28 KQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSR 87 ++ T +Q + + + L+IAPTGSGKT AA + + + + K + Sbjct: 16 EELTELQLEAFRKILSGKDVLIIAPTGSGKTEAAIIPIFEAMLK--------MEKPEGIV 67 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 +YI+P++AL D+ R + +GIA+ + +RV +R GDTP +R++ +R P Sbjct: 68 AIYITPLRALNRDMLRRI----RGIAEF--------LGIRVDVRHGDTPDSQRARQSRKP 115 Query: 148 PDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHT 206 P +LITTPE+ L L R+ L+ V V++DE+H + S+RG L+++LERL + Sbjct: 116 PHLLITTPETFQILFLGKNLRKALKNVRYVVVDEIHELIDSERGVQLSVALERLREM--A 173 Query: 207 SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTG 266 Q IGLSATV V+ F+G D V+ A + +I +V P + +A+ G Sbjct: 174 RFQTIGLSATVSRPKLVSRFVGAD--AEVLEWKAEKEYEIEVVKPEVD----EKLAAKLG 227 Query: 267 EDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSI 326 D+ E I D V H S ++F N+R AE L +L +L Sbjct: 228 VDAEIAGELKF-------IADAVKEHGSALIFVNTRQTAEALGIKLKKLI---------- 270 Query: 327 AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 DV + HHGS+S+E R E+ GEL ++ TSS+E Sbjct: 271 ---------------------DVEV---HHGSLSRETRVEAEERFAKGELDALICTSSME 306 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM 446 LGID+G V+LV+Q +P +QR+GR+GH +G VSKG + D+++SAVIV Sbjct: 307 LGIDIGHVNLVVQYNSPRQAVRLVQRVGRSGHGLGRVSKGYVVASSFDDILESAVIVRRA 366 Query: 447 FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD--EWYSRVRRAAPWKDLPRRVFDATL 504 G LE+ DVLA Q + A A++ ++D + + V+RA P+++L FD Sbjct: 367 KEGLLEDAEIHFKSFDVLANQ-ICALALEYGRIDAEKAHRIVKRAFPYRNLTFEEFDEVC 425 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE 564 + L A K+ ++ G + AR + + IPD Y V+ + Sbjct: 426 NFL----------ARIGKIFYDE--GEIGARRNTRRYFYENISMIPDEKHYRVV-----D 468 Query: 565 KAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 + + +G LDE + + +I + WR+ + D+V+ +P W GE Sbjct: 469 VSSGKTIGSLDESFL-STFSGEIFAMKGELWRVLSV--DEVVRVEPVSAEGEIPSWVGEE 525 Query: 625 NGRPAELGEMIGDFLHLLADGAFFSGTIPPW--LAEENTIANIQGLIEEQRNATGIVPGS 682 P E+ + +G + LA G L + ++ + + EQ VP Sbjct: 526 IPVPFEVAQEVGMLRNWLAGLIKAKGEKAALKALGAKGDVSVVVKTLREQIEKGFAVPYD 585 Query: 683 RHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARI 742 H+ +E + +++++ +G +V+E +A + A G +SV D ++ Sbjct: 586 SHITIEGSEN-----VVVVNACFGHKVNETLGRILALLLTARRG--SSVAVEIDPYRIKL 638 Query: 743 PDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLW 802 + ++ + +PE + E++ A+F R + ++ R G + Sbjct: 639 SPAKPEEVESILKSIQPEAV-----ESLAERAVFDTRLMQW---KVVNAARKFGFLSK-- 688 Query: 803 QQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTT 862 + L + + D P+ E LRE + D+ ++ +++ GEI++S + Sbjct: 689 EDELSRINVRSLVVKLKDTPIYREALREIFVEKMDVERTAEVVEKISSGEIEVSVYNELS 748 Query: 863 PSPFA 867 P A Sbjct: 749 PISLA 753 >UniRef50_C7DIA3 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA3_9EURY Length = 920 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 184/616 (29%), Positives = 291/616 (47%), Gaps = 96/616 (15%) Query: 21 DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREA 80 D FL+ + T +Q V + L+IAPTGSGKT AA L LD + E+ Sbjct: 6 DIFLKKYGSYTQIQKDAIPVIRSGNNCLLIAPTGSGKTEAAVLPVLDSII--------ES 57 Query: 81 HKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI----RTGDTP 136 ++ LYI+P++AL D+ + L +E+ RVGI R GDT Sbjct: 58 REKIGIVALYITPLRALNRDMIKRL----------------SEICSRVGITISVRHGDTL 101 Query: 137 AQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLAL 195 ++RS + PP ILITTPE+L +L T + L+ V+ VIIDE+H + +KRGA L++ Sbjct: 102 RKDRSVQEKAPPQILITTPETLQSILPTKKLGAALKNVKFVIIDEIHELYYNKRGAQLSV 161 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANM 255 LERL + QRIG+SATV ++ V+ FLGG R +V A + + + +P Sbjct: 162 GLERLKD-MAGDFQRIGISATVGNSDVVSKFLGGGRKCEIVAIDARKQMHLEVYLPEKQK 220 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL 315 + + G D A +ET I V + +ST++F N+R + E L +RL + Sbjct: 221 VKLKDIEEKFGLDEEA------MARLET-IAALVKKSKSTLIFANTRQIVEALGSRL--V 271 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 Y + I+V HH S+ K++R E KSG+ Sbjct: 272 YLNSVYDFGGISV--------------------------HHSSLDKDERIRVENDFKSGK 305 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 ++ ++ATSSLELGID+G +DLV+Q +P +QR+GR+GH G VS G D Sbjct: 306 VKSIIATSSLELGIDVGKIDLVVQYGSPRQALRLVQRVGRSGHSTGRVSNGAIIATNNAD 365 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA--LQVDEWYSRVRRAAPWK 493 +++ I + + +G++E +N LDVL Q +A A++ +++ Y V RA P++ Sbjct: 366 ALEALSICDNVNSGKIEEFGVENNALDVLVNQ-LAGIALEKGECRIEAAYETVVRAYPYR 424 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L F ++ +S + + G++ G ++ +PD Sbjct: 425 NLKMETFIEAVEFMSKNH------------LLRYSEGVMRGTGGTRIYYYKHLSVLPDSK 472 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI------ITLGATSWRIQQITRDQVIV 607 + V + +R + LDE V +N+I IT G W++ I + + Sbjct: 473 RFVV-----KSVVNNRILSTLDENFV----INNIDEGSVFITKG-LPWKVISIDEGTITI 522 Query: 608 TPAPGRSARLPFWRGE 623 P+ A +P W GE Sbjct: 523 EPSTDLEAAVPDWVGE 538 >UniRef50_Q1YKM0 ATP-dependent helicase n=2 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YKM0_MOBAS Length = 862 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 248/877 (28%), Positives = 390/877 (44%), Gaps = 108/877 (12%) Query: 12 PDVFSPATR---------DWFLRAFKQPTAVQPQTWHVAARSEH---ALVIAPTGSGKTL 59 PD F P + +WF R P +P + AR+E AL+IAPTG+GKTL Sbjct: 5 PDPFLPGSAPFPLPAPFLEWFARNGWSP---RPHQLDLLARAESGASALLIAPTGAGKTL 61 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 A FL +L L R G + + LYISP+KAL TD+ RNL+ P+ Sbjct: 62 AGFLPSLVDLHRRG--RPKPGTRPYGIHTLYISPLKALATDIARNLEKPV---------- 109 Query: 120 GETEVNLRVGI--RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETV 176 E+ L+V + RTGDT R + PPDIL+TTPE L L++ + AR + V Sbjct: 110 --AEIGLKVTLETRTGDTSQVRRQRQKLKPPDILLTTPEQLALLIAGKDARGFFSDLRYV 167 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 I DE+H++ SKRG L+L L RL +L Q IGLSATV D+ +L P V Sbjct: 168 IFDELHSLVTSKRGHLLSLGLARL-RMLRPDIQTIGLSATVSEPDDLRRWLVSQAPGGDV 226 Query: 237 NPPAMRHPQIRIVVPVAN--MDDVSSVASGTGEDSHAGR-------EGSIWPYIETGILD 287 A + V P A+ + ++ +VA G + + +G Y I + Sbjct: 227 AEIADADGVLPDVAPDADPRLSELITVAGGAKPEITILKSSERVPWQGHTSRYAMPEIYE 286 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSS 347 + H++T++F N+R AE L EL+ R+ Sbjct: 287 AIQAHKTTLLFVNTRFQAEML---FQELW--------------------------RINDE 317 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVA 407 + IA HHGS+ QR E A+ + +LR VVATS+L+LGID G VDLV+ V P + Sbjct: 318 TLPIA-LHHGSLDVGQRRKVEAAMAANQLRAVVATSTLDLGIDWGDVDLVVHVGAPKGAS 376 Query: 408 SGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQ 467 QRIGR+ H++ SK + P R ++++ ++ + G + LDVLAQ Sbjct: 377 RLAQRIGRSNHRMDEPSKAILVPANRFEVLECQAALDANYLGAQDTPAMRDGALDVLAQH 436 Query: 468 TVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWN 526 + A + + D+ Y+ V AAP+ L R FD +D + +G Y + + K+V Sbjct: 437 VLGMAVAEPFRADDLYAEVTTAAPYASLDRETFDRVIDFVATGGYALRVYERY-AKIVLT 495 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR----VGELDEEMVYES 582 + + P + GTI D V L K+ R +G+++E V Sbjct: 496 EDGTWRVSHPRIAQQYRMNAGTILDAPSLQVRLIRRRTKSAIARGGPILGKIEEGFVEAL 555 Query: 583 RVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL 642 D + R + I +Q +VT A +++P + G G+ + +L Sbjct: 556 APGDTFSFSGQVLRFETIHENQCLVTKAVSEDSKIPTYAG---GKFPLTIFLAAQVRAML 612 Query: 643 ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILH 702 AD A + G +P +++ I +QR + ++PG L++E + G ++ Sbjct: 613 ADPARW-GELPEQVSDWLAI--------QQRKS--LIPGPDELLIETFPN--GKRFFLVA 659 Query: 703 SPY-GRRVHEPWAVAIAGRIHALWGADASVVASDDGIV--------ARIPDTDGKLPDAA 753 P+ GR H+ + + R+ VA+D I A I DG+L A Sbjct: 660 YPFEGRLAHQTLGMLLTRRLERARAKPLGFVATDYAISIWGRGDMGAMI--ADGRLSLDA 717 Query: 754 IFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLE 813 LF+ + L + + S L FR+CA + L+ R PG Q + A + + Sbjct: 718 --LFDEDMLGDDLEAWMADSWLLKRTFRQCAVISGLIEKRHPGQEKTGRQVTVSADLVYD 775 Query: 814 IAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLN 849 + + + PD ++ T + + D+ + L+ R+ Sbjct: 776 VLRAHEPDHILMRATWADAATGLLDVSRVSDLLGRIK 812 >UniRef50_Q2IR64 DEAD/DEAH box helicase n=81 Tax=Alphaproteobacteria RepID=Q2IR64_RHOP2 Length = 937 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 274/998 (27%), Positives = 405/998 (40%), Gaps = 186/998 (18%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 +AD+ P LLPD F R WF P A Q A AL+IAPTG+GKTLA Sbjct: 3 IADSDAPLDLLPDRF----RHWFAARGWTPRAHQLALLRQARAQRSALLIAPTGAGKTLA 58 Query: 61 AFLYALDRLFR-------------------EGGEDTRE---------------------- 79 FL L L + GE E Sbjct: 59 GFLPTLVELSEAAPNLSPIAGRGRLAGVAGKSGEGADELPIAGAAVCAEAPPHPARRAAL 118 Query: 80 -------AHKRKTSR---ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 A +SR LYISP+KAL D+ RNL+ P+ + + +RV Sbjct: 119 AAPPSPRARGEGSSRGLHTLYISPLKALAVDIARNLEAPI----------AQMNLPIRVE 168 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG-VETVIIDEVHAVAGSK 188 RTGDTP R++ + PPDIL+TTPE L L+L S L G ++ +++DE+HA+ SK Sbjct: 169 TRTGDTPVSRRARQRKYPPDILLTTPEQLALLLASDDAPYLFGSLQRIVLDELHALVTSK 228 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--------------GGDRPVT 234 RG L+L L RL + + GLSATV ++A FL G +R Sbjct: 229 RGDLLSLGLARL-WRIAPQLRATGLSATVADPDELARFLVPQPFVPSPLVGEGGAERSEA 287 Query: 235 V-------VNPPAMRHP----------QIRIVV------PVANMDDVSSVASGTGEDSHA 271 P A P Q IVV P+ M D G H+ Sbjct: 288 TGEGASAGAEPAAYPSPRPSPTRGEGEQADIVVARGAAQPIVEMLDTKERLPWAG---HS 344 Query: 272 GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA 331 R + I D + R+ +T+VF N+R AE L EL+ Sbjct: 345 AR------HALAEIYDLIRRNTTTLVFVNTRSQAEML---FQELW--------------- 380 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 R+ ++ IA HHGS+ QR E A+ +G LR VV TSSL+LGID Sbjct: 381 -----------RMNDDNLAIA-LHHGSLDVAQRRKVEDAMAAGRLRGVVCTSSLDLGIDW 428 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRL 451 G +DLV+ V P + +QRIGRA H++ S+ + P R ++++ A ++ + Sbjct: 429 GDIDLVVNVGAPKGSSRLMQRIGRANHRLDEASRAVLVPANRFEVLECAAAIDAVAENAQ 488 Query: 452 ENLTPPH--NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML-S 508 + TPP LDVLAQ + A + DE Y VR AAP+ DL R FD TLD + + Sbjct: 489 D--TPPQRTGALDVLAQHILGCACGEPFVADELYKEVRSAAPYADLSRADFDDTLDFVAT 546 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL--------- 559 G Y + F ++ +++ A P + + GTI + M V L Sbjct: 547 GGYALKSYERF-ARIRQDKQGKWRVANPKVRQAYRLNVGTIVEEAMLKVKLVRSAKSKGG 605 Query: 560 -PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 G G R +G+++E + D G R + + DQV V+ A + AR+P Sbjct: 606 GHTGAIARGGRMLGQIEEYFIEGLTPGDTFVFGGEVVRYEALMEDQVYVSRAHDKDARVP 665 Query: 619 FWRGEGNGRPAELGEMIGDFLHLLADGAFFSG---TIPPWLAEENTIANIQGLIEEQRNA 675 + G L E + LLAD + G + WLA ++ + Sbjct: 666 SYMGGKFPLSTYLAERV---RGLLADKQAWKGLPDQVRDWLALQSKASR----------- 711 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 VPG LV+E + ++ + GR H+ + + R+ VA++ Sbjct: 712 ---VPGRSELVVETF-PRAAKYYLVCYPFEGRLAHQTLGMLLTRRLERARARPLGFVANE 767 Query: 736 DGI-VARIPDTDGKLPDAAI---FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 + V + DT + + LF+P+ L + + SAL FR A + L+ Sbjct: 768 YALAVWGLGDTSHMIRQGRLDLDALFDPDMLGDDLEAWLAESALMKRTFRYAAIISGLIA 827 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNG 850 R G Q + ++ + PD ++ + + DL L ++ R+ Sbjct: 828 RRFAGEEKSRRQVLFSTDLVYDVLNKHQPDHVLLRAARADAATGLLDLRRLSDMLTRIK- 886 Query: 851 GEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE 888 G I ++ +P L G A + SD LA+ Sbjct: 887 GRIVHKELDRVSPLAVPVMLEIGREAVYGEASDELLAD 924 >UniRef50_C5A764 ATP-dependent helicase, lhr-like protein (Lhr) n=8 Tax=Thermococcaceae RepID=C5A764_THEGJ Length = 926 Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 243/874 (27%), Positives = 383/874 (43%), Gaps = 149/874 (17%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 P R F + +Q ++ + + L+IAPTGSGKT AA L + + EG Sbjct: 3 PLLRKAIRERFGRLNRLQQDSFREVSSGKSVLIIAPTGSGKTEAAVLPVFNEILEEG--- 59 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 K LYI+P+KAL D+ ER ++ + V +R GDT Sbjct: 60 ------LKPISALYIAPLKALNRDLL------------ERLEWWGRKLGITVEVRHGDTS 101 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLAL 195 A ++K T+NPP +LI TPE+L ++LT ++ R+ L V+ VI+DE+ + +KRG+ L L Sbjct: 102 AHRKAKQTKNPPQMLIITPETLGVILTVKSLRKHLENVKFVIVDEIAELVDNKRGSQLLL 161 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANM 255 +LERL + +RIG++ATV + +V +L + T+V P + + ++ P Sbjct: 162 NLERLAEI--ADFKRIGMTATVGNEEEVRDWLKAE---TIVKPNWKKSYRFHVLYPKPKE 216 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL 315 +D + A R +W +E +H ++FTN+R AE L RL Sbjct: 217 EDKELAEKLSVSPEIASRLRVLWEIVE--------KHGKALIFTNTRQFAEVLAHRLK-- 266 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 A V+ HHGS+SKE R E+ALK G+ Sbjct: 267 -----------------------AWGKPVEV--------HHGSLSKEARVRAEKALKEGK 295 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 ++ ++ TSS+ELGID+G VD+VIQ +P V +QR+GRA H++G VS+G D Sbjct: 296 IKALICTSSMELGIDIGDVDVVIQYMSPRQVNRLVQRVGRAKHRIGEVSEGYIIATNVED 355 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKD 494 + S VI + GR E + P LDVLA V L + Y +RA ++D Sbjct: 356 YLQSLVIAKRALEGRFEAVEPI-GGLDVLAHFVVGLLIEYKRLPRERPYEIAKRAYVYRD 414 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 L + L +L G ++ E+ +L R GA + TIPD Sbjct: 415 LSWSDYLDVLRVLEDARLVG----------YDEESNLLYLRRGAFQYYYENLSTIPDEVS 464 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 + V + K+G +G LDE V + + SW + +I + ++ RS Sbjct: 465 WRVF----DAKSGH-VIGRLDESFVMDLEEGMEFVMNGRSWIVLKIDDEARLLKVRESRS 519 Query: 615 --ARLPFWRGEG----NGRPAELG----EMIGDF---LHLLADGAFFSGTIPPWLAEENT 661 + +P W GE G ++G E++ DF L LL +G FS EE Sbjct: 520 LESAIPSWEGEMIPVPFGVAFDVGRLRRELVFDFNKALDLL-EGVEFS--------EE-- 568 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 ++ EE R+ P R +V+E +++H+ +G R +E AI + Sbjct: 569 --ELRRAFEEIRDEP--FPTDRDIVVESTPKA-----LVIHADFGSRANE----AIGRIV 615 Query: 722 HAL----WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 H+L +G SV + IV + P F PE++ + + + G L Sbjct: 616 HSLLILRYGRVFSVRSQGHAIVFKTP-----------FQLNPEEVKRYLYQEPGRVELIV 664 Query: 778 AR-FRECAA---RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 +R R+ A R L + R R R +++ ++ + + + ETL E Sbjct: 665 SRALRDSHAYRWRMLNVAKRFGALR--------RDARIRKVERLFEGTVIERETLNELYH 716 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFA 867 D D+ E +M L G +++ V PS A Sbjct: 717 DKVDVKKAELVMELLKAGSLRVKTVLRKEPSTLA 750 >UniRef50_Q0C4L0 ATP-dependent helicase, DEAD/DEAH family n=6 Tax=Alphaproteobacteria RepID=Q0C4L0_HYPNA Length = 875 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 262/963 (27%), Positives = 399/963 (41%), Gaps = 145/963 (15%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 M D P LP PA WF R P Q + AL+IAPTG GKTLA Sbjct: 1 MPDTAPPPFQLP----PAFAAWFARRGWSPRPHQLALAETSLSGGSALLIAPTGGGKTLA 56 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 FL +L L + R + LYISP+KAL DVQRN+ P+ Sbjct: 57 GFLGSLIEL----AQKPRSNSHIPSLHTLYISPLKALAADVQRNVMTPVT---------- 102 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 E + +R+ RTGDT R + + PPDIL+TTPE L L++ S A ++ VIID Sbjct: 103 EMALPIRIETRTGDTATHVRQRQRKTPPDILLTTPEQLALLIASDNAANFFADLKCVIID 162 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL------------ 227 E+HA+A SKRG L+L L L A + + +GLSATVR +A +L Sbjct: 163 EIHAIAPSKRGDLLSLGLATL-AEWSPTCRFLGLSATVRDPEQLAGWLDVRSAPSTPLPS 221 Query: 228 ----GGDRPVTVVNPPAMRH-------------PQIRIV-VPVANMDDVSSVASG--TGE 267 G + +P A H P + I+ P D+ + S Sbjct: 222 GRGAGVRGQPSSASPVATSHAQPLLPERARGPIPSVHIIQTPTTINPDIDILVSRQRIPW 281 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 H+GR P + I D + T+VF N+R AE L EL+AA P IA Sbjct: 282 SGHSGRFAV--PEVYEAIRDA----KMTLVFVNTRSQAELL---FQELWAANEDNLP-IA 331 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 + HHGS++++QR E A+ +G L+ VV TS+L+L Sbjct: 332 L--------------------------HHGSLARDQRERVEAAMAAGLLKAVVCTSTLDL 365 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GID G VDLVIQ+ P A +QRIGR+ H++ SK L P R ++++ + Sbjct: 366 GIDWGEVDLVIQMGAPKGAARLIQRIGRSNHRMDEASKALLVPTNRFEVLECRAAQAAVE 425 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 AG ++ P LD+LAQ + A + + Y +RRA P+ L ++ +D + Sbjct: 426 AGEIDGDGPRAGALDILAQHIMGRACGEGFHLPALYDEIRRAQPYAALDWETYERLVDFV 485 Query: 508 -SGRYPSGDFSAF----------------RPKLVWNRETGILTARPGAQL-LAVTSGGTI 549 +G Y + F R K G + P + LA +GG Sbjct: 486 ATGGYALKTYDRFHRIVRRADGLWVARTPRDKQAHRMNVGAIVEAPMLSVRLASFAGGAS 545 Query: 550 PDRGMYSVLLPEGEEK---AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 P+ G GE++ R++GE++E + D R+ I + Sbjct: 546 PNSG-------GGEQRRAIRAGRKLGEMEEYFLSLLTPGDTFLFAGEILRLLTIDGMDAL 598 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQ 666 VT A S +P + G L + + +H + + W Sbjct: 599 VTRAQSDSPAIPTYNGGKFPLSTFLADRVRHMIHNPEEWKHLPDPVREWFE--------- 649 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY-GRRVHEPWAVAIAGRIHALW 725 I+E R+A +P HL++E D ++ P+ GR H+ + + R+ Sbjct: 650 --IQELRSA---IPPPDHLLVETFPR--ADRHYLVSYPFEGRLAHQTLGMLVTRRLERAG 702 Query: 726 GADASVVASDDGI-VARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 VAS+ + V + D G L A I F PE L + E + SAL F CA Sbjct: 703 AKPVGFVASEYAMAVWGMEDMRG-LDMAEI--FHPEMLGDDLEEWLDESALMKRTFAHCA 759 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLR-ECLQDVYDLPALER 843 + L+ PG Q + ++ + + ++L+ R + + D+ L Sbjct: 760 LISGLIHRNMPGTEKNSRQVTFSTDLIFDVLRSHEPGHILLQATRADAATGLLDVRRLSD 819 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN 903 ++ R++G I SPFA ++ E ++ + A A R + + +L+R+ Sbjct: 820 MLARIHG---HIVHKPLAKISPFAVPVMLEVGREPVFGASAMEAILREA----EEDLVRD 872 Query: 904 LLG 906 +G Sbjct: 873 AMG 875 >UniRef50_Q6KZS3 ATP-dependent RNA helicase n=4 Tax=Thermoplasmatales RepID=Q6KZS3_PICTO Length = 901 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 174/602 (28%), Positives = 294/602 (48%), Gaps = 91/602 (15%) Query: 29 QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI 88 +PT VQ + + ++ L+I+PTGSGKT AA L L+ + RE + K + Sbjct: 26 EPTLVQSMAIPLILQGKNLLIISPTGSGKTEAAILPILNMISRE---------RPKPVSL 76 Query: 89 LYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPP 148 LY++P++AL D+ L + + R G + V +R D ER ++ R+P Sbjct: 77 LYVTPLRALNRDM-------LSRLFEYSRNLG-----INVQVRHSDINESERREIVRHPG 124 Query: 149 DILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS 207 DILITTPESL +ML ++ RE + ++ ++IDEVH +A ++RG+ +++LERL L H Sbjct: 125 DILITTPESLQIMLVNKNLREIISNIKYLVIDEVHEMAQNERGSQFSIALERLRELNH-G 183 Query: 208 AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 Q IGLSAT + ++A F+ D+ + +V P + +I + +P ++S + Sbjct: 184 FQVIGLSATANNELELAEFIEPDKKIEIVKPEIRKSVEINVTLPEKASQELSDKMG--CD 241 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 + +AG I+ I ++VF N R +AE ++ R+ + ++ I Sbjct: 242 NQYAGSIKRIYNEINNI-------SGGSLVFVNRRYVAEDMSFRI-----KLMDKNARIE 289 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 V HHGS+S+E R E KSG+L+ ++ TSSLEL Sbjct: 290 V--------------------------HHGSLSRESRENAENDFKSGKLKALICTSSLEL 323 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GID+G +LV+Q +P + LQRIGR+GH + S+GL +L ++ IV Sbjct: 324 GIDIGTAELVVQFNSPRQINKLLQRIGRSGHSLEKTSRGLVVCNDVIELEEAMAIVGNAL 383 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 G+LE++ N L +A Q + + ++Y+ ++RA P+KDL D L + Sbjct: 384 EGKLEDVLIRKNSLATVANQVMLELYFKKKMNYIDFYNLIKRAYPFKDLS---IDDYLSV 440 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 + +F A K++ + + + R + + IP +Y V+ ++ Sbjct: 441 I-------NFLASIKKIIIDGDN--IIKRYSILNYYINNISMIPSEKIYRVI-----DQT 486 Query: 567 GSRRVGELDEEMVYESRVNDI-----ITLGATSWRIQQITRDQVIVTPAPGRSARLPFWR 621 + +G LDE+ V VN+I + ++WR +I ++++V P +A P W Sbjct: 487 NKKFIGTLDEKYV----VNEIEPGSYFVMKGSTWRTIRIDEEKILVEPF-NTAAIAPHWT 541 Query: 622 GE 623 GE Sbjct: 542 GE 543 >UniRef50_A9A127 DEAD/DEAH box helicase domain protein n=2 Tax=Thaumarchaeota RepID=A9A127_NITMS Length = 913 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 227/879 (25%), Positives = 374/879 (42%), Gaps = 145/879 (16%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL 63 NP P SL + F T +Q + + + + LVIAPTGSGKT + + Sbjct: 11 NPIPESLFENF-----------GFSNLTEIQKKASPIILQKKDCLVIAPTGSGKTECSVI 59 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L ++T++ K KT LYI+P++AL DV R R + + Sbjct: 60 PIFSLL-----KNTKKPGKIKT---LYITPLRALNRDVFR------------RITKYAHQ 99 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 L + IR GDT ++R K+T NPPD+LITTPE+L ++LT + + +E +++DEVH Sbjct: 100 SELSIEIRHGDTTQKDRKKITENPPDVLITTPETLVILLTQVKYLDAFSELEWIVVDEVH 159 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAM 241 + S+RG L+LS+ERL+ +IGLSATV + + F+ G R ++ ++ Sbjct: 160 ELLSSERGTQLSLSVERLEFNSELPLTKIGLSATVGNFEEAGKFVVGTKRKCEIIRDTSV 219 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R + + + DV+ I ++ LD ++FTN+ Sbjct: 220 RKYDVEVKYVDGTISDVAE---------------KIIEHVSNLNLDS-----PVLLFTNT 259 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 RG +E L + L E + HHGS+SK Sbjct: 260 RGESEFLASILKE--------------------------------KSIIPIELHHGSLSK 287 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 E R TEQ L+ G+ VV TSSLELG+D+G+V+LVI +P V+ +QRIGR+ H Sbjct: 288 EVREETEQNLREGKRGIVVCTSSLELGLDIGSVELVIHYGSPRQVSKLVQRIGRSRHNRN 347 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVD 480 +KGL D ++ I++ + G +E LDVLA V + + +D Sbjct: 348 ASAKGLIITNNSDDEFEAQAILQRIQEGSIEEQKIHDGSLDVLAHHLVGLTMQIGEISID 407 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + + +++A P+++L LD+L Y L++ T + + G Sbjct: 408 KAFDLIKKAYPFRNLKLEELVDVLDLLDSNY-----------LIFFDRTKMTFWKKGRSF 456 Query: 541 -LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQ 598 + TIPD + V + G + +G LD+ V + +I L + WRI Sbjct: 457 KYYFENLSTIPDILKFKVF-----DSVGKKIIGTLDQRFVGDYGDSGNIFVLKGSQWRIL 511 Query: 599 QITRDQVIVTPAPGRSA--RLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWL 656 + V P R +P+W GE + +G+F + +G+ Sbjct: 512 NVDEKSFTVNVEPFRGGGITVPYWEGENIPIDYKTARKVGNFRSKVRNGSL--------- 562 Query: 657 AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVA 716 + EQ N I ++V+E R + I++HS +G +++ + Sbjct: 563 -------QLTNKTIEQLNFNEI-SEENNVVVESNRSQ---GSIVIHSCFGTKINSTLSTL 611 Query: 717 IAGRIHALWGADASVVAS-DDGIVARIPDTDGKLPDAAIF---LFEPEKLLQIVREAVGS 772 ++ + ++ G SVV S DG RI + +F L + L +V ++ Sbjct: 612 LSSMLSSMLG---SVVDSRSDG--YRIVLSSRSRISEKLFLEILKDDYDLFSMVTASLAG 666 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 + R C A+ + GR + +R A L E Y ++ E LRE Sbjct: 667 THNVNWR-TWCVAKKFGIVGRGAVY------ERKSARFLYE---RYAKTALVQEALRELF 716 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 D YDL ++L++ + +I + + S A +L Sbjct: 717 HDKYDLKNTDKLLKEIRDDQIHVKWLEVDQFSKLAEPIL 755 >UniRef50_B9LRP7 DEAD/DEAH box helicase domain protein n=7 Tax=Halobacteriaceae RepID=B9LRP7_HALLT Length = 972 Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 227/724 (31%), Positives = 323/724 (44%), Gaps = 101/724 (13%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREA---H 81 + F PT Q + A ++ALV+APTG+GKT A L D + D R+A Sbjct: 24 QGFSTPTEPQREAIPPLADGKNALVLAPTGTGKTETAMLPVFDAIV-----DARDAPGDQ 78 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 R LYI+P++AL D+ L+ + + V +R GDT ERS Sbjct: 79 PRSGISALYITPLRALNRDMMDRLEW------------WGDRLGVEVAVRHGDTTRYERS 126 Query: 142 KLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 K +PPD+LITTPESL +LT S+ R L V V+IDEVH +A +KRGA L + LERL Sbjct: 127 KQADDPPDVLITTPESLQAILTGSKMRVALEDVAHVVIDEVHELASAKRGAQLTVGLERL 186 Query: 201 DALLHTSAQRIGLSATVRSASDVAAFL----------GGDRPVTVVNPPAMRHPQIRIVV 250 + QRIGLSATV + +V FL GDR +V A +R++ Sbjct: 187 RRVA-GPFQRIGLSATVGTPEEVGKFLVGSGKRDPDHPGDREFEIVEVAAGTRTDVRVLD 245 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P D + +++ A ++ T I + V H ST++F N+R AE L + Sbjct: 246 PPITDRDTTLAGELAVDETTAS-------HVRT-IREIVADHESTLIFVNTRQTAEALGS 297 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 R L A R +++ SI D E HHGS+SK+ R E Sbjct: 298 RFKTL-AEREEKAGSID-DPTEIEV-------------------HHGSLSKDVRIDVEDR 336 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 KSGEL +V TSS+ELGID+G VD V+Q +P VA LQR+GRAGH+ VS+G Sbjct: 337 FKSGELDGLVCTSSMELGIDVGRVDHVVQYGSPREVARLLQRVGRAGHRRDLVSEGTVVT 396 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD--EWYSRVRR 488 + D +++ I A +E H LD +A Q V MD V E Y V Sbjct: 397 QGGDDTLEALAIARRAGAELVEPAAIHHGSLDTVANQIV-GVVMDEGDVHAREAYQIVTS 455 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW-NRETGILTARPGAQLLAVTSGG 547 A P++DL F + L G + L+W + + L G + Sbjct: 456 AYPFRDLAEETFQEIVRELDGNH-----------LLWLDEASDTLEKSGGTWQYFYANLS 504 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV--YESRVNDIITLGATSWRIQQITRDQ- 604 IPD Y V + + R +G LDE V + I G WRI ++ ++ Sbjct: 505 MIPDESTYEVY-----DMSSRRGIGTLDERFVVNFAGPGETFIQRGEM-WRITEVDEEEE 558 Query: 605 -VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT--------IPPW 655 V VTP + +P W G P + E +G A+ T + Sbjct: 559 RVNVTPIADPAGEVPSWIGREIPVPKPVAEEVGRIRGEAAEALAAGSTPEAVAGDLAERY 618 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRII-LHSPYGRRVHEPWA 714 A+E TIA + + +A VP R +V+E G R + +++ +G V+E A Sbjct: 619 PADERTIATALKPVVDHVDADHPVPTDRRIVIE------GSARTVAVNAAFGHEVNETLA 672 Query: 715 VAIA 718 +A Sbjct: 673 RLLA 676 >UniRef50_B1L6H5 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6H5_KORCO Length = 958 Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 228/881 (25%), Positives = 375/881 (42%), Gaps = 113/881 (12%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 ++ D L P A RD + + T +Q + R ++ L+IAPTGSGKT AA Sbjct: 2 NSEDIFKLFPKCLISAIRD---KGITELTEIQRKGIPYVMRGDNVLLIAPTGSGKTEAAI 58 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 + ++ E +++ +LYI+P++AL D++ +R + Sbjct: 59 WPIISKILAE--------NEKMGFLLLYITPLRALNRDLE------------DRIIFWAS 98 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 + L VG+R GDT ER + + +PP+I+ITTPE+L +ML+S + L V+ V+IDEV Sbjct: 99 KCGLNVGVRHGDTLKSERQRQSESPPEIIITTPETLQIMLSSPKLSLHLSRVKYVVIDEV 158 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 H + KRG L+++LERL + QR+ LSA++ + +F + VV Sbjct: 159 HELLDDKRGVQLSIALERLKRITRRDFQRVMLSASLGNPHLALSFFSYSKKGEVVTSGEE 218 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTN 300 R I+++ P +D+ + E R +L + +R RS IVFTN Sbjct: 219 RKMIIKVIFPKVAEEDLRLSSKLLLEPDAIAR---------VRVLADAIRSSRSAIVFTN 269 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R +AE L R++++++ HH S+S Sbjct: 270 TRSMAEALGYRMSKIFSE-------------------------------LKIHVHHSSLS 298 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 +E R +E LK GEL V++TSS+ELGID+G +D+V+Q +P LQR+GR+GH Sbjct: 299 REARVESESLLKMGELSAVISTSSMELGIDVGHIDMVLQYGSPRQALKLLQRVGRSGHGP 358 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD-ALQV 479 GV++GL + D ++S V+ + G+LE + P DVL V + L V Sbjct: 359 RGVARGLIVAQDSDDFLESLVLSKNALEGKLEEIRPLEKSYDVLYHTIVGMLLRERELSV 418 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 ++ P++DL L +S + P++VW E + + R ++ Sbjct: 419 NDIVKVANGCYPYRDLSAEDCRKLLSFMSRAW---------PRVVWYDEN-MDSVRRASE 468 Query: 540 L---LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRV-NDIITLGATSW 595 L + TIP+ YSV+ +E G +G+LDE V E + W Sbjct: 469 LAFDYFFNNVSTIPETVGYSVV----DEITGF-YIGKLDEAFVLEYLFPGAKFVFRGSVW 523 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPW 655 R+++I + V +P W GE E+ +G L + A+ G + Sbjct: 524 RMKRIEGGTIYVEQVFDPIGAIPSWIGEQLPVSMEVASEVGR-LRGRVEEAYRRGKLDSL 582 Query: 656 ---------LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYG 706 + E I I E +P + +V+E R +++HS YG Sbjct: 583 SHEIAKEYGFSTEEDIRRALSPILEHIEGGFPLPTDKRIVVEDVRGG-----VVIHSTYG 637 Query: 707 RRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIV 766 V+ AIA + + V I+ ++ + + E E+ Sbjct: 638 NLVNRTLGRAIAQAMLKRFKLLVRVSEDPYRILVLGVSSEPIVNVMKSLVGEGEEFFL-- 695 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILE 826 EA+ +S+ F R R L+ + L ++A+ Y P E Sbjct: 696 -EAIENSSFFRLRLLHTLKRMGLIKDYASS----------KIISLNKLARAYEGTPPYEE 744 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFA 867 LRE L +D+ L+R + EI++ PSP A Sbjct: 745 ALRETLIKDFDIEGAMELLRCIEREEIEVVRSEKEGPSPLA 785 >UniRef50_C5AJ01 DEAD/H associated domain protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AJ01_BURGB Length = 1632 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 146/356 (41%), Positives = 196/356 (55%), Gaps = 39/356 (10%) Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST 336 +W + I + HR+T+VF N+R +AE+L L E RL Sbjct: 354 VWERVYDRIAELAAGHRTTLVFVNTRRMAERLARHLGE----RL---------------- 393 Query: 337 SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 D+ A HHGS++KE R EQ LK G L+ +VAT+SLELGID+G V+L Sbjct: 394 ---------GHDLIAA--HHGSLAKESRFDAEQRLKHGRLKLLVATASLELGIDIGEVEL 442 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTP 456 V Q+ +P +A LQR+GR+GHQVGG KG FP +R +LV+ A +++C+ G L+ L Sbjct: 443 VCQIGSPRGIAPFLQRVGRSGHQVGGTPKGRLFPLSRDELVECAALLDCVARGELDRLRV 502 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 P PLDVLAQQ VA E + R AAP+ DL R FD L ML+ + S Sbjct: 503 PRAPLDVLAQQIVAEVTCAEWDETELWRRFTHAAPYADLSRERFDEVLAMLAEGF-SSRR 561 Query: 517 SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL-PEGEEKAGSRRVGELD 575 R L +R TG + AR GA+L AVTSGGTIPD Y+VLL P+G + +G ++ Sbjct: 562 GPRRAYLHRDRSTGTVRARRGARLTAVTSGGTIPDNADYTVLLEPQGTQ------IGTVN 615 Query: 576 EEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAEL 631 E+ ES D+ LG S+RI ++ +V V A G++ LPFW GE GR EL Sbjct: 616 EDFAVESLAGDVFQLGNQSYRILRVETGRVRVEDARGQAPNLPFWLGEAPGRSDEL 671 Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 107/232 (46%), Positives = 137/232 (59%), Gaps = 10/232 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA WF F PT Q + W + LV APTGSGKTL AFL A+D L R+ Sbjct: 16 FHPAVAGWFAHTFAAPTGAQARAWPLIKAGRSTLVAAPTGSGKTLTAFLCAIDDLVRDA- 74 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP+KAL D++ NL PL GIA E RRG +R +RTGD Sbjct: 75 -LAHDGMLPDATLVVYVSPLKALSNDIRVNLDAPLAGIARELARRGLPVPEIRTAVRTGD 133 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 T ER+ + P IL+TTPESLY++L+S + R L V T I+DE+HA+AG+KRG+HL Sbjct: 134 TTPAERNAQRKRAPHILVTTPESLYVLLSSESGRRMLSTVRTAIVDEIHALAGNKRGSHL 193 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 +L+LERLDAL+ RIGLSAT R VA FL G + A HPQ Sbjct: 194 SLTLERLDALVGRPLPRIGLSATQRPIGLVARFLVGGK-------DAAAHPQ 238 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 20/227 (8%) Query: 680 PGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 P LV+ER DE G ++++HSPYG R++ W +A+ R + + A+DD I+ Sbjct: 775 PTRDTLVMERFFDESGGTQLVIHSPYGTRINRAWGLALRKRFCRAFNFELQAAATDDAII 834 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 + + ++ +A+ + LF R+R A +L +P T G RT Sbjct: 835 LSLSLAHSFVLSDVWRYLRTATAEHVLVQALLDAPLFGVRWRWNATTSLALPRYTGGRRT 894 Query: 800 PLWQQRLRASQLLEIAQGYPD----------------FPVILETLRECLQDVYDLPALER 843 QR+++ LL A +PD P++ +TL +CL + D Sbjct: 895 APQLQRMKSEDLL--ATVFPDQVACAENLVGEREVPRHPLVDQTLDDCLHEALDTEGWLA 952 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERR 890 L+ R+ GEI++ PSP A +L + + DAPL ERR Sbjct: 953 LLARIEAGEIELIARDLPAPSPLAAEIL--NAKPYAFLDDAPLEERR 997 Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 115/432 (26%), Positives = 164/432 (37%), Gaps = 98/432 (22%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ +++ R PV + R L Q + T G Sbjct: 1181 WCERHLLARIHRYTVKRLRREIEPVERADFMRFLFHWQHLSADTRGM------------- 1227 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G + + VIEQL G A WE +LPARV DY++ +DEL +G V+W+ Sbjct: 1228 GREALAAVIEQLEGFEAAAGAWEDDLLPARVADYATGGIDELCRSGRVVWTRIAPPARSP 1287 Query: 1195 GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLA--DGGAWFAQQI----------S 1242 G A A P A + L+ + +L + GAW A + Sbjct: 1288 GERAPAADAGAGGGRGPRGAAKTAAGPLKTTPIVLLPRRNVGAWQALHDERAQPALSARA 1347 Query: 1243 QRIRDKIG--------ESVDLS-----ALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 QR+ D + E VD + L++AL LV G + +D +A LRAL R + Sbjct: 1348 QRVHDALAAHGAMFFDELVDDARLLPVELEQALGELVAAGRVNADSFAGLRALLRPA--V 1405 Query: 1290 RTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQV------------------- 1330 + S S R RRG + + AGRW+L++ Sbjct: 1406 KRSAYYSPRTRRGGALI----------GGMDDAGRWALVRRPVPVTAAAGAEADAAAAHR 1455 Query: 1331 --------EPLNDT-------------ERMLALAENMLDRYGIISRQAVIAENIPGGFPS 1369 EPL E + +A +L RYG++ + + E P Sbjct: 1456 DGIDGAGGEPLARAGTSRTSAAGPAPREALEHIAWTLLRRYGVVFWR--LLEREAAWLPP 1513 Query: 1370 MQTLCR---SMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSA 1426 + L R +E G I GRFV GL G QFA I LR+L Q +T V S Sbjct: 1514 WRDLLRVYQRLEARGEIRGGRFVAGLAGEQFALPEAIPVLRELRRQPADG-QWTVV--SG 1570 Query: 1427 NDPANVWGNLLP 1438 DP N+ G LLP Sbjct: 1571 ADPLNLAGTLLP 1582 >UniRef50_C3NGE7 DEAD/DEAH box helicase domain protein n=12 Tax=Sulfolobaceae RepID=C3NGE7_SULIN Length = 912 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 210/818 (25%), Positives = 372/818 (45%), Gaps = 134/818 (16%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 ++ L+IAPTG GKT AA L +F++ E LYI+P++AL D++ Sbjct: 35 KNVLIIAPTGYGKTEAAILPIFYTIFKDKPEKIST---------LYITPLRALNRDLESR 85 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL-YLMLT 163 L +R G+ + V +R GD+ +ER ++ NPPD+LI TPE+L YL+L Sbjct: 86 L-----------KRVGDA-FGISVNVRHGDSSQRERKEILDNPPDVLIVTPETLLYLILN 133 Query: 164 SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDV 223 R+ ++ +IIDE+ + KRG L++ L+R+ + Q IG+SAT+ Sbjct: 134 DTFRKYFTNLKWIIIDELQEMLDEKRGIELSVLLQRIKKITRNRIQLIGISATIGDIEMA 193 Query: 224 AAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS-SVASGTGEDSHAGREGSIWPYIE 282 +L + V V + A++ ++ +++P D +V G D+ A E Sbjct: 194 KIYLDREGEVEVASINAIKDIKVNLILPKVEKKDADLAVRLGLRPDTIARLEK------- 246 Query: 283 TGILDEVLRHRSTIV-FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS 341 L+E++++ I+ FTN+R +E + L Y+ ++ Sbjct: 247 ---LNEIIKNNKPIIIFTNTRETSEFVANHLTSNYSLKIG-------------------- 283 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 SHHGS+S+E R TE KSG + +VATSSLELGID+G ++LV+Q Sbjct: 284 ------------SHHGSLSREIRIKTENDFKSGNIDAIVATSSLELGIDIGRINLVVQYM 331 Query: 402 TPLSVASGLQRIGRAGHQVGGVSKGLFFP-RTRRDLVDSAVIVECMFAGRLENLTPPHNP 460 +P V +QR+GR+GH++G S G P D+++ I+E +++ LE NP Sbjct: 332 SPRQVIRLIQRVGRSGHKIGRTSIGYVIPSEDVFDILECRAIIEALYSSYLEKPLFEENP 391 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 LDV A + +E +R + +K+ +F++ +++L Sbjct: 392 LDVAAHEIAGMVLEGYKNPNEILEILRNSFYFKNFTDEMFESVIELLES----------- 440 Query: 521 PKLVWNRETGILTARPGAQLLA-VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV 579 K+V RE G L P ++ + IPD +++ + A + ++G LDE+ V Sbjct: 441 AKIVKRREDGSLV--PSRRIWKYYYTTNMIPDSIRSYIVI----DHATNIKIGTLDEDFV 494 Query: 580 YESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL 639 + LG+ W++ I D++ V A ++ LP W GE E+ + +++ Sbjct: 495 ASLDEESVFILGSKLWKVVSIENDRIFVERAELKNGILPSWFGESIPVEKEIARKVYEYI 554 Query: 640 HLLADGAFFSGTIPPWLAEENTIAN-IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 ++L G + E+++I+ ++ +E R + P +++E ++ + Sbjct: 555 YMLEKGKIET--------EDDSISKVVREFVE--RGYPELRPD--LILVEIVKNNL---- 598 Query: 699 IILHSPYGRRVHEPWAVAIA------GRIHALWGAD------ASVVASDDGIVARIPDTD 746 II+HSP+G R + I+ + + AD +SV+ + + +I +T Sbjct: 599 IIIHSPFGSRGNNTLGAIISVMLDVEKQTKTSYRADPYHIAISSVLPITENDMEKIVNTL 658 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 LP K+++I++ + S F + LL+ + G P + L Sbjct: 659 NSLPII--------KIVEILKRGIKESPQFKWK--------LLVEIKRFGMVDPEKEITL 702 Query: 807 RASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 +S I + Y D + E + E L YD+ L+ L Sbjct: 703 TSS----IIKAYGDTIIGEEAVNELLVKNYDIEILKEL 736 >UniRef50_A8AC71 DEAD/DEAH box helicase domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AC71_IGNH4 Length = 894 Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 195/623 (31%), Positives = 283/623 (45%), Gaps = 113/623 (18%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 SLLP A R + + PT +Q + + + H L+ APTGSGKT AA L R Sbjct: 5 SLLPKELREALRK---KGIRSPTPIQEKAIPIILQGYHTLITAPTGSGKTEAALLPVAAR 61 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQ-RNLQIPLKGIADERRRRGETEVNLR 127 + ++G +A LYI+P++AL D+ R L++ E L Sbjct: 62 IIQKGSFGGLKA--------LYITPLRALNRDIGIRALELL-------------REAGLN 100 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAG 186 V + GDTP R K+ +PP++L+TTPESL ++L ++ + L VE VI+DE+H + Sbjct: 101 VDVWHGDTPYSRRKKIIEHPPEVLVTTPESLNIILANKEMLKHLNNVEYVIVDELHELIE 160 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 KRGA L ++LERL QRIG+SAT+ + + FLGG R V V ++ P+I Sbjct: 161 EKRGAELTVALERLSE--RARVQRIGVSATISNVNLAKKFLGGGRFVIDVADETVKKPEI 218 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 ++ V + + VS V I I+ +L VFTN+R AE Sbjct: 219 KVYVEDSFENMVSKVKE-------------IIKKIDGTVL----------VFTNTRDTAE 255 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L L E + +AV HHGS+SK++R Sbjct: 256 VLGKILKEEFG------EEVAV--------------------------HHGSLSKKEREG 283 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ-----VG 421 E+ + GEL+ +VATSSLELGID+G+V V+Q A+P V + +QR+GRA H+ G Sbjct: 284 VERRARKGELKVIVATSSLELGIDIGSVKHVVQFASPRRVTNLVQRVGRAEHKPYESPKG 343 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 V GL + ++ VI + G LE + NPLDVLA Q V + Sbjct: 344 SVVTGL----KPYEAFEALVIAKRAERGNLEEIRVHENPLDVLAHQIVGTLVEGPRHKER 399 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + VRRA P+ L + F+ ++L + S D S R A ++ Sbjct: 400 LFDLVRRAYPFWGLSYQDFEEVFNLLVENKLVSCDGSFCR-------------ATKKGEI 446 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 T+ G I + Y V++ E VG LDEE V + D LG W+ + Sbjct: 447 YYRTT-GMIVESKQYKVIVYGTNEV-----VGTLDEEFVVDLEPGDTFVLGGKVWKFIGM 500 Query: 601 TRDQVIVTPAPGRSARLPFWRGE 623 + V V + G P W GE Sbjct: 501 ENENVYVERSEGEGPP-PSWEGE 522 >UniRef50_Q11PA5 ATP-dependent helicase n=2 Tax=Sphingobacteriales RepID=Q11PA5_CYTH3 Length = 813 Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 214/867 (24%), Positives = 381/867 (43%), Gaps = 106/867 (12%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF +P Q TW LV APTGSGKT + + L ++ + + Sbjct: 9 WFKNQKWKPHLFQQDTWKAMLEGYSGLVNAPTGSGKTYSVWFGILLEYLQKHPD-----Y 63 Query: 82 KRKTSR---ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 K KT + ++I+PI+AL +++ + +R + ++ V IR+GDT + Sbjct: 64 KTKTKQGLQAIWITPIRALAKEIEYS----------TKRSCIDLDIPFEVAIRSGDTTSA 113 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 +++K +N P +L+TTPESL+L+L+ + + + + TV++DE H + GSKRG + L+L Sbjct: 114 QKTKQKKNMPQLLVTTPESLHLLLSQKGYADVFKNLSTVVVDEWHELIGSKRGVQMELAL 173 Query: 198 ERLDALLHTSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVANM 255 RL L+ + G+SAT+ + + L G P ++ + +I V P Sbjct: 174 SRLKG-LNPMLKIWGISATIGNLEEAKDVLLGKYGNPTKMIRAELPKRVEIETVFP---- 228 Query: 256 DDVSSVASGTGEDSHAGREGSIWP-YIETGILDEVL----RHRSTIVFTNSRGLAEKLTA 310 D + E W ++ T ++ +V+ S ++FTN+R +E Sbjct: 229 DKI---------------ENFPWSGFVGTKLVPKVIPIIHNSHSVLIFTNTRSQSEI--- 270 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 Y L +P A A HHGS+ ++ R E Sbjct: 271 ----WYRQLLDVAPEFAGLIA----------------------LHHGSLDQKTRTWVEDN 304 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 L +G+L+ V+ TSSL+LG+D AVD V+QV +P VA +QR GR+GH G +SK F P Sbjct: 305 LHAGKLKAVICTSSLDLGVDFSAVDTVVQVGSPKGVARFMQRAGRSGHSPGALSKIYFVP 364 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 ++++ A + E + +E+ P DVL Q V A D + + Y +++ Sbjct: 365 TNSLEIIEGAAMREAIKRNVVESRVPYVRSFDVLVQYLVTLAVSDGFRPEIIYEEIKKTF 424 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGD-FSAFRPKLVWNRETGI--LTARPGAQLLAVTSGG 547 + + F L ++ S D + F ++ E GI +T+R A ++ G Sbjct: 425 CYASVTPEEFAWALQFITNGGNSLDAYDEFHKVII---EEGIYKVTSRAIATRHRLSMGT 481 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 + D M + +R+G ++E + + + D+ + I I V+V Sbjct: 482 IVSDSAMQVKYM-------SGKRLGSIEESFISKLKPGDVFWFSGNNLEIVHIHHMDVLV 534 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQG 667 + + +P W+G ++L EMI D F +G I EE Sbjct: 535 RKSKAKKGMIPSWQGGRMPLSSQLAEMI----RYKIDHFFDAGAI---EEEELNKLKELF 587 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 ++ +R+ +P ++ ++E + G + + ++ GR VHE A ++ +I + Sbjct: 588 DLQAKRSH---LPTNKEFLIEYVQSREG-YHVFMYPFEGRFVHEGMAAIVSHKISEIQPI 643 Query: 728 DASVVASDDGIVARIPDTDGKLPDA-AIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 SV +D G + D + + +A + LF + L + ++ +V ++ + RFRE A+ Sbjct: 644 TFSVAMNDYGF-ELLSDQEIPIEEALELDLFNIDNLEKEIQLSVNATEMARRRFREIASI 702 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 A L+ PG + A ++ + Y ++ LR+ +V D R MR Sbjct: 703 AGLVFQGYPGKSAKTRHLQANAELFFKVFEQYDSNNLL---LRQAYDEVLDFQLEIRRMR 759 Query: 847 RLNG--GEIQISDVTTTTPSPFATSLL 871 + E ++ V P+PFA ++ Sbjct: 760 KAYNRINEQKLVLVRPDKPTPFAYPIM 786 >UniRef50_Q6MCM6 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCM6_PARUW Length = 804 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 228/876 (26%), Positives = 396/876 (45%), Gaps = 100/876 (11%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF +P Q + W + L+ PTG+GKT AA+L AL +L ED + Sbjct: 12 WFNFKKWEPLPFQKEAWLKFLEGKSGLISVPTGAGKTYAAYLSALSKL----HEDPK--- 64 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 K +ILYI+P++AL D++ L+ P+ + ++ RV RTGDT ++ Sbjct: 65 --KGIQILYITPLRALAKDLESALKAPIDDL----------KLIYRVERRTGDTSYIKKE 112 Query: 142 KLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 K ++PP+ILITTPESL +ML + A ++++I+DE H + SKRG L L RL Sbjct: 113 KQNKHPPEILITTPESLAVMLCNGHATSQFSYLQSIIVDEWHELLASKRGVLFELCLSRL 172 Query: 201 DALLHTSAQRIGLSATVRSASDVA-AFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 A S Q GL+AT+ + A +G DR +VN R + V+P ++D + Sbjct: 173 KA-WKPSVQIWGLTATIGNIQQAAQVCVGVDRSPIIVNAKMEREVILTAVLP-ESLDKL- 229 Query: 260 SVASGTGEDSHAGREG-SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 GR G + PY +L+ + ++ST++FTN+R E+ + E A Sbjct: 230 ---------PWTGRLGLRLLPY----VLNRLNFNQSTLIFTNTRSQTERWYQAILE---A 273 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 R + IA+ HH ++ K+ R E+ +K G +R Sbjct: 274 RPEWKNLIAI--------------------------HHSAIDKKTREGIEEGIKFGSIRF 307 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 VV TSSL+LGID+ V+ VIQ+ +P SVA LQR GR+ H+ P +L++ Sbjct: 308 VVCTSSLDLGIDLPRVEKVIQIGSPKSVARLLQRAGRSSHRPLTPCYIEVVPTHALELIE 367 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 + +E+ P N DVL Q + A + Q DE +S+++ A ++DL + Sbjct: 368 IQAYRLAIKEHHIESRLPLKNCYDVLMQHMMTCAIGEGFQKDELFSQIKTTACFQDLSLK 427 Query: 499 VFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 F+ L L SG + ++ KLV++ + I+ + G S GTI +V Sbjct: 428 DFEDCLHFLISGGNSLKAYPEYK-KLVYSNDKYIVEDK-GLIRRHKMSIGTISSDSQITV 485 Query: 558 LLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 +G + +G ++E + + D G ++ Q V A + Sbjct: 486 KWTKG------KAIGMIEESFLTNLKPGDHFLFGGKQLQLVQYRDMTAYVRLAKHKQKHA 539 Query: 618 PFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG 677 WRG A LG + + S +L ++ +I+ Q+ + Sbjct: 540 AVWRGSHLPFSASLGVELRKVCE--QKISLNSSDQEKFLLDQ--------IIQLQQKFS- 588 Query: 678 IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG 737 +P ++ L++E + + G W + ++ G+ +H+ A+ +A R+ ++ +D G Sbjct: 589 YLPTTKQLLIELTKSQEG-WHLFVYPFEGKIIHQGLALLVAHRLSKKASQTFTISTNDYG 647 Query: 738 --IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA-LLMPGRT 794 +++R + L LF + + + ++E + + + FR+ A A L+ PG Sbjct: 648 FELLSRKSFQEEMLTTE---LFSTQYMNEDIQELINTQEIGKRYFRDIARIAGLIFPGYP 704 Query: 795 PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV-YDLPALERLMRRLNGGEI 853 H+T Q ++ +S L ++ Q Y ++L+ ++ + D+ ++ L+ + RL+ ++ Sbjct: 705 HKHKTNR-QVQISSSLLFDVLQKYDANNLLLQQAKKEVLDIQFEKIQLKNCLTRLSQAQL 763 Query: 854 QISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAER 889 I + SPF L V + + S L ER Sbjct: 764 MIKKLKKF--SPFGLELFVERVNDTL--STESLTER 795 >UniRef50_Q167Y6 ATP-dependent helicase, DEAD/DEAH box family n=28 Tax=Alphaproteobacteria RepID=Q167Y6_ROSDO Length = 817 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 235/861 (27%), Positives = 361/861 (41%), Gaps = 108/861 (12%) Query: 21 DWFLRAFKQPTAVQPQTWHVAARSEHA--LVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 DWF Q + P + AR+ L+IAPTG GKTLA FL L L Sbjct: 10 DWFASKGWQ---IHPHQLDMLARAHDPALLLIAPTGGGKTLAGFLPTLIDL--------- 57 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 R LYISP+KAL D++RNL P+ E ++ +RV RTGDT A Sbjct: 58 ATAPRDGLHTLYISPLKALAADIKRNLTTPVT----------EMDLPIRVEDRTGDTSAA 107 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 + + +PP IL+TTPESL L+ + A +G+ V++DE+HA+A SKRG L L+L Sbjct: 108 RKKRQRADPPHILLTTPESLALLTSYEDAPRMFKGLRRVVVDEIHALAESKRGDQLMLAL 167 Query: 198 ERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV--ANM 255 RL L +R+GLSATV +A L +HP ++ Sbjct: 168 ARLQRLC-PDLRRVGLSATVDDPQAIARLLA-------------KHPDPCEILQADPGPA 213 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL 315 D+S + + G Y +L+++ H++T++F N+R AE + L Sbjct: 214 PDISMLTTPKAPPWAGGNAA----YAIPAVLEQIKAHQTTLIFHNTRAQAEIF---FHNL 266 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 + A + P I + HHGS+ ++QR E A+ G+ Sbjct: 267 WLANEEGLP-IGI--------------------------HHGSLDRQQREKVEAAMVRGD 299 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 LR +V T SL+LGID G VDLVIQ+ P +V +QRIGRA H+ SK L P R + Sbjct: 300 LRAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFE 359 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 +V+ ++ ++AG+L+ P DVL Q + A D Y V + DL Sbjct: 360 VVECHAALDAVYAGQLDGEPRGRGPRDVLCQHILITACAGPFDADALYGEVITVGAYADL 419 Query: 496 PRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 R FD L +G Y + ++ +L+ N + P A + GTI D Sbjct: 420 TRAEFDECLTFCATGGYALRAYDQWQ-RLMQNADGLWHLRDPRAAQKIRMNIGTIQDTDT 478 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 V L + G + +GE++E D +G R + + V V+ + Sbjct: 479 LKVRL---QRSRGGKPLGEIEEGFAATLTPGDTFLIGGQIVRYEGLREMTVEVSRNAAKK 535 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 ++ + G +L + + F T P+L A+ + QR Sbjct: 536 PKVATFLGTKFATSTQLSARVVE---------IFQDTAWPYLP-----AHTADWLALQRE 581 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 + + R L+ D G + +++ GR + + + R+ + VA+ Sbjct: 582 RSQLPAPGRLLIESFAHD--GRAQTVVYGFAGRNGQQTLGLLLTKRMEEMGLDPLGFVAT 639 Query: 735 DDG--IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPG 792 D I P TD LF+ E L + + +A+ FR A A L+ Sbjct: 640 DYATLIWGLQPVTD------PAPLFDLEALETGLETWLAGNAVMKRTFRASATIAGLIQR 693 Query: 793 RTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLR-ECLQDVYDLPALERLMRRLNGG 851 TP R Q + L + Q Y ++L+ R E L+ + D + + R+ G Sbjct: 694 NTPSARKTGRQATFSSDILYDTLQKYDPEHLLLDVTREEALRGLVDFGRIREMAERVAG- 752 Query: 852 EIQISDVTTTTPSPFATSLLF 872 +I VT SP A +L Sbjct: 753 --RIDHVTLPRVSPLAAPMLL 771 >UniRef50_A4CH41 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=13 Tax=Bacteroidetes RepID=A4CH41_9FLAO Length = 834 Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 228/876 (26%), Positives = 382/876 (43%), Gaps = 84/876 (9%) Query: 1 MADNPDPSSLLPDV--FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 MA P+ PD DWF R P Q +TW H L+ APTGSGKT Sbjct: 1 MAGPKHPTGQPPDTDALMAIASDWFKRQGWDPFPFQHKTWAAFMEGRHGLLNAPTGSGKT 60 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 A + L R+ + R+ HK K + ++I+P++AL ++ + + ER Sbjct: 61 YALWFPILLEYMRQH-PNFRDGHK-KGLKAIWITPLRALSREIHQ---------SAERIT 109 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG-VETVI 177 R + ++ VGIRTGDT + ER++ + PD+LITTPESL L+L ++ + L ++ Sbjct: 110 R-DLDIPFEVGIRTGDTSSAERARQRKILPDLLITTPESLQLLLATKGYKKLFADCYAIV 168 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRI-GLSATVRSASDVAAFLGGDRPVTVV 236 +DE H + GSKRG + L+L RL + A RI G+SAT+ + L G + Sbjct: 169 VDEWHELLGSKRGVQMELALSRLKTI--CPALRIWGISATIGNLEQARQVLLGPESGALE 226 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 N +R + V S+ T E G + ++ ++ + ++T+ Sbjct: 227 NSVLIR-------AQIDKKITVRSIIPDTMET--FPWRGHLGLHLLEHVIPIIRNSKTTL 277 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 +FTN+RG E + A L++ P +A D A HH Sbjct: 278 LFTNTRGQCEIW-------FRALLEKHPELAGDIA----------------------MHH 308 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRA 416 GS+ K R EQA+++ LR VV TSSL+LG+D V+ V+Q+ P VA LQR GR+ Sbjct: 309 GSIDKATRNWVEQAIRNESLRAVVCTSSLDLGVDFAPVETVVQIGGPKGVARFLQRAGRS 368 Query: 417 GHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA 476 GH+ G S F P +L++++ + + + +E+ P DVL Q A D Sbjct: 369 GHRPGRESVIYFLPTHAMELIEASALQQAVRKQAVEDRIPYLASYDVLVQYLTTLAVSDG 428 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTAR 535 +E Y V ++ + R ++ L+ L G + ++ V +T R Sbjct: 429 FLPEEIYREVTGTFCYQAMSREDWEWLLNFLVMGSQSLASYDEYKKVEVLPDGLFKVTNR 488 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 A G + D M +K G +G ++E + + D+ T + Sbjct: 489 GVAMRHRFQIGTIVGDAHMTVKY-----QKGGY--IGTIEEWFISKLNPGDVFTFAGRNL 541 Query: 596 RIQQITRDQVI-VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 +I RD V V + +++++P W G +E+ E++ + L+ P Sbjct: 542 EFIRI-RDMVAQVRNSSRKTSKVPSWMGGRLTLSSEMSELLREELY---------SHRRP 591 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 + I ++ L + Q+ IVPG ++E + G + + + GR VHE A Sbjct: 592 AGEQSREIRSLDALFKRQQ-LESIVPGPDQFLIETFQSREG-YHHLFYPFEGRFVHEAMA 649 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIF---LFEPEKLLQIVREAVG 771 ++ RI L S+ +D G +D +L I LF PE LL +++++ Sbjct: 650 SLLSYRISLLSPITFSLAYNDYGFELL---SDRELNIGVILDNDLFSPEYLLDDLQKSLN 706 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRE 830 ++ + +FR+ A + L+ P + + + L E+ + Y PD + + RE Sbjct: 707 ATEMARRKFRDIAVISGLVFTGYPKKGIKMKHLQSNSQLLFEVFRDYEPDHLLFRQAFRE 766 Query: 831 CLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPF 866 + + L + + R++ EI TP F Sbjct: 767 TFEHQLEEGRLRKALERISRQEILWKACEKYTPFSF 802 >UniRef50_Q3AJL5 DEAD/DEAH box helicase-like n=17 Tax=Cyanobacteria RepID=Q3AJL5_SYNSC Length = 831 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 231/859 (26%), Positives = 376/859 (43%), Gaps = 92/859 (10%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF + P Q +TW+ + L+ PTGSGKT AA + + R+ E Sbjct: 27 WFAQRNWTPLPFQQETWNAYLAGRNGLIQVPTGSGKTFAAVMGPMARMLAE-------EQ 79 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 K R++YI+P++AL D+ ++ P++ + +RVGIR GD+ + ER+ Sbjct: 80 PLKGIRLVYITPLRALSRDLSLAIREPIEAMG----------WPIRVGIRNGDSSSSERT 129 Query: 142 KLTRNPPDILITTPESLYLMLTSRARETLRG-VETVIIDEVHAVAGSKRGAHLALSLERL 200 K + PP IL+TTPESL L+L++ E L G +ETVI+DE H + GSKRG+ L L L Sbjct: 130 KQLKAPPQILVTTPESLALLLSNAKAEELFGQLETVILDEWHELMGSKRGSQTELCLSWL 189 Query: 201 DALLHTSAQRIGLSATVRSASDVA--AFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 L Q +SAT+ + A A P + PA R +IR ++P + D Sbjct: 190 RQL-RPQLQTWAISATIGNIEQAARHALGTAGEPQLIGGAPA-RSTEIRSILP--DTIDG 245 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 A G + + P I ST++FTN+R +E+ L Sbjct: 246 FPWAGHLGLRMYEELVARLNPGI------------STLLFTNTRNQSERWHQCLR-FACP 292 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 +++ ++ HH ++ + +R E ++K+G +R Sbjct: 293 EMEKGLAL----------------------------HHSAIDRSEREAIEASVKAGSIRW 324 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 VV TSSL+LG+D V+ V+Q+ +P ++A LQR GR+ H GG S+ LF P +L++ Sbjct: 325 VVCTSSLDLGVDFQPVEQVVQIGSPKNLARLLQRAGRSAHLPGGTSQVLFMPTNALELLE 384 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 + + + G +E PP PLDVL Q A + VR A + DL + Sbjct: 385 LSAVRRGLVEGLVEQRKPPKAPLDVLLQHLTGLACGPGFNPEHTLQTVRSCAAYADLSQD 444 Query: 499 VFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGA-QLLAVTSGGTIPDRGMYS 556 +D + L G G + +R KL W + R A L + GTI + Sbjct: 445 DWDWCMLFLEQGGECLGAYPRYR-KLEWEETSQRYRVREKAIARLHRLNVGTITAAPAIT 503 Query: 557 VLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSAR 616 V G +G ++E + + + D+ ++ V + ++ Sbjct: 504 VRFVRGAV------LGHVEETFISQLKPKDVFFFSGRQLEFVRLRDMTAYVKVSTKKTRT 557 Query: 617 LPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNAT 676 +P W G G+ A L +++ L L D A G + + + ++ L + Q++ + Sbjct: 558 VPAWAG---GQMA-LSDLLTHHLRLEVDRA-SRGDL-----DNAELQALKPLFDRQQDIS 607 Query: 677 GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDD 736 ++P L++E CR G + + GR VHE A R+ L +V +D Sbjct: 608 -VLPTVGQLLIETCRTREGT-HLFAYPFEGRFVHEGIGFLWASRLTRLERGTITVSVNDY 665 Query: 737 GIVARIPDTDGK---LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 G P + L D L + ++L + ++ A+ S L RFR A A LM Sbjct: 666 GFELLAPKSYPMAELLEDHIDLLLDRQQLERDLKNALNLSELQRRRFRAIAQIAGLMNRG 725 Query: 794 TPGHRTPLWQQRLRASQLLEI-AQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGE 852 P Q ++ AS L ++ ++ P+ ++L+ +E L D ++ LE ++R E Sbjct: 726 FPRSSKSTGQLQISASLLFDVFSRHEPNNRLLLQAQQEVLDDQLEISRLEAALKRAASQE 785 Query: 853 IQISDVTTTTPSPFATSLL 871 V T PSP A LL Sbjct: 786 --WLHVETPRPSPLAFPLL 802 >UniRef50_Q0BTQ2 ATP-dependent helicase n=27 Tax=Alphaproteobacteria RepID=Q0BTQ2_GRABC Length = 855 Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 238/807 (29%), Positives = 339/807 (42%), Gaps = 117/807 (14%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 +L P WF R Q A AL+IAPTG GKTLA FL +L L Sbjct: 1 MLQTTLPPRFAAWFERRGWTLRRHQAAMLDAAEADRSALLIAPTGGGKTLAGFLPSLISL 60 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 R+ + T LY+SP+KAL TD+ RNL P++ E + +R+ Sbjct: 61 ARQAELPKGQPEGLHT---LYVSPLKALATDIARNLTSPVQ----------EMGLPIRIE 107 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET-LRGVETVIIDEVHAVAGSK 188 RTGDTP+ R++ PP IL+TTPESL L+L+ T +G+ TVIIDEVHA+AG+K Sbjct: 108 TRTGDTPSGRRARQRETPPHILLTTPESLSLLLSLEDAPTFFQGLRTVIIDEVHALAGTK 167 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RG LAL L RL L+ + GLSAT + ++GGD V+ P++ + Sbjct: 168 RGDQLALCLARLRRLV-PGLRMSGLSATAAHPQALRDYIGGD--AIVIEEAGGAPPRLEM 224 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 ++P + H G + IL+ + TIVF N+R AE L Sbjct: 225 MLPSGRLP----------WSGHMGLAAA------PAILERIKAAAMTIVFVNTRAQAELL 268 Query: 309 TA---RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 RLNE + IA+ HHGS+ EQR Sbjct: 269 FQALWRLNE-------ETLPIAL--------------------------HHGSLELEQRE 295 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 EQA+ SG LR VVATSSL+LGID G VD V+Q+ P V+ LQR+GRA H++ S Sbjct: 296 RVEQAMASGLLRAVVATSSLDLGIDWGGVDQVLQIGAPKGVSRLLQRVGRASHRMDEASN 355 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 + P R ++++ + + A L+ P LDVLAQ + A D + Sbjct: 356 AILVPANRFEVLECEAAIMGVSARELDGDPPGPGGLDVLAQHLLGMACSAPFHPDTMFEE 415 Query: 486 VRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 VR+AAP++ L R+ FD TL + +G Y + W+R R LL V Sbjct: 416 VRQAAPYRMLDRKDFDDTLGFVETGGYTLSHYEQ------WHR-----LFRDSEGLLHVR 464 Query: 545 SG----------GTIPDRGMYSVLLPEGEEKAGSRR---VGELDEEMVYESRVNDIITLG 591 S GTI M V L K R +GE++E + R D G Sbjct: 465 SDRVARQWRMNIGTIVQSPMIKVRLRGNRGKRAEGRGSTLGEVEEYFASQLRPGDTFMFG 524 Query: 592 ATSWRIQQITRDQVIVTPAPGR-SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG 650 R Q+ D V+ G +P + G L + L Sbjct: 525 GRLLRFVQL-HDTVLEADEGGDGDPMVPAYAGARLPLTTSLANRVRGMLQDRQGWQHLPD 583 Query: 651 TIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGD-WRIILHSPYGRRV 709 + WL E++ +PG L++E GD W ++ + GR Sbjct: 584 PVREWL--------------EKQRIRSRLPGRNDLLIETF--PRGDRWYMVAYCFEGRNA 627 Query: 710 HEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREA 769 H+ + + R+ L VA+D + + P LFE + L + Sbjct: 628 HQTLGMLVTKRMERLGMIPLGFVATDYVMAT----WSARQPTGLDRLFEEDILGDDLEAW 683 Query: 770 VGSSALFAARFRECAARALLMPGRTPG 796 + S++ FR A + L+ + PG Sbjct: 684 MAESSMLRRIFRHVAVVSGLIERQQPG 710 >UniRef50_B6YWG2 Large helicase-related protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWG2_THEON Length = 925 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 226/856 (26%), Positives = 360/856 (42%), Gaps = 133/856 (15%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 F + +Q + + + + L+IAPTGSGKT AA L + + EG K Sbjct: 13 FGKLNELQMKAFREVSSGKSVLIIAPTGSGKTEAAVLPVFNAILEEG---------LKPI 63 Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 LYI+P+KAL D+ L+ K + + V +R GDT A +++K T+N Sbjct: 64 SALYIAPLKALNRDLLERLEWWGK------------RLGISVEVRHGDTSAYKKAKQTKN 111 Query: 147 PPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 PP +LI TPE+L ++LT ++ R+ L V+ VI+DE+ + +KRGA L L+LERL + Sbjct: 112 PPQMLIITPETLGVILTVKSLRKALENVKFVIVDEIAELVDNKRGAQLLLNLERLVEI-- 169 Query: 206 TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT 265 +RIG++ATV + +V +LG + T+V P + + ++ P D + Sbjct: 170 ADFKRIGMTATVGNEDEVREWLGAE---TIVKPSWRKAYRFHVLYPRPEEKDFKLAEELS 226 Query: 266 GEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS 325 A R ++W +E H ++FTN+R AE L RL Sbjct: 227 LAPDVAARLRTLWEIVEE--------HGKALIFTNTRQFAEILAHRLK------------ 266 Query: 326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSL 385 A V+ HHGS+SKE R E+ALK G+++ ++ TSS+ Sbjct: 267 -------------AWGKPVE--------VHHGSLSKEARIKAERALKEGKIKALICTSSM 305 Query: 386 ELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC 445 ELGID+G VD+VIQ +P V +QR+GRA H++G VS+G D + S +I Sbjct: 306 ELGIDIGDVDVVIQYMSPRQVNRLVQRVGRAKHRIGEVSEGYVITSNVEDYLQSLIIARR 365 Query: 446 MFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 GR E + P LDVLA V + + Y RRA +++L + L Sbjct: 366 ALEGRFEAVEPI-GGLDVLAHFLVGLLIEYKRMPRERPYEIARRAYVYRELKWEEYLDVL 424 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE 564 +L G +++E +L R GA + TIPD + V + Sbjct: 425 GILEDARLIG----------YDKEKNLLYLRRGAFQYYYENLSTIPDEVSWRVF-----D 469 Query: 565 KAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS--ARLPFWRG 622 +G LDE V + + SW + +I + ++ +S + +P W G Sbjct: 470 SGSGHIIGRLDESFVMDLEEGMEFVMNGRSWIVLKIDEEAKLLRVRESKSLESAIPSWEG 529 Query: 623 EGNGRPAELG--------EMIGDF---LHLLADGAFFSGTIPPWLAEENTIANIQGLIEE 671 E P + E+ DF L LL +G FS ++ EE Sbjct: 530 EMIPVPFGIALDVGRLKRELTFDFKRALELL-EGVDFSEV------------ELRRAFEE 576 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 ++ G R +V+E +++H+ +G R +E + + +G SV Sbjct: 577 IKD--GPFSTDRDIVIESTPKA-----LVIHADFGNRANEALGRLVHSFLILRYGRVFSV 629 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 + IV + P EPE L IV ++ S + R A R Sbjct: 630 RSQAHAIVFKTPFQLNPSEVKRYLYQEPEALEFIVARSLRDSHAYRWRMMNVAKR----- 684 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGG 851 + R +++ I + + + E L E D D+ E ++ L G Sbjct: 685 ----------FGALRRDAKIRRIERLFEGTVIEREALNELYHDKVDVKRGELVLSMLKAG 734 Query: 852 EIQISDVTTTTPSPFA 867 +++ PS A Sbjct: 735 SLRVKTELRREPSRLA 750 >UniRef50_Q1CZG3 ATP-dependent helicase, DEAD/DEAH box family n=5 Tax=Bacteria RepID=Q1CZG3_MYXXD Length = 860 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 250/856 (29%), Positives = 369/856 (43%), Gaps = 97/856 (11%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTRE 79 R WF P Q + W AR E L+ PTG+GKT AA+L L + Sbjct: 58 RGWFRAKGWTPYPFQEEAWAAHARGESGLIHVPTGAGKTYAAYLGPLADV---------A 108 Query: 80 AHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 A+ + ++LY++P++A+ DV++ L+ PL + + ++ V RTGDT + Sbjct: 109 ANGQPGLQLLYVTPLRAVSRDVEKALREPLTVL----------DADITVESRTGDTSSSV 158 Query: 140 RSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLE 198 R + P +LITTPESL ++LT RA E + +VI+DE H + GSKRG+ L L+ Sbjct: 159 RQRQRERLPQVLITTPESLCVLLTHERAPELFASLRSVIVDEWHELLGSKRGSQLELAQA 218 Query: 199 RLDAL---LHTSAQRIGLSATVRSASDVAAF-LGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 RL L T A LSAT+ + + A +G + T+VN A+ P +VV Sbjct: 219 RLRHFAPGLRTWA----LSATLANLEEAARHAVGTGQTPTIVN-AALERP---VVVETLL 270 Query: 255 MDDVSSVA-SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + V + +G S R G+ W LD RST++FTN+R AE+ Sbjct: 271 PESVDAFPWAGHLGFSMLARVGA-W-------LDA---ERSTLIFTNTRSQAERW---FE 316 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 L AR + IA+ HHGS+ +E+R E LK Sbjct: 317 GLRFARPEWEHLIAL--------------------------HHGSIDREERERVESGLKE 350 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G LR VV TSSL+LG+D G V+ V+QV +P + +QR GR+ H+ G LF P Sbjct: 351 GSLRIVVCTSSLDLGVDFGPVERVVQVGSPKGIGRTMQRAGRSAHRPGATCHILFVPTHA 410 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +LV+ A + + +E TPP PLDVLAQ V A D VR AA + Sbjct: 411 LELVEMAAAKDALLRREVEARTPPDKPLDVLAQHLVTCALGGGFTPDALRDEVRTAAAFA 470 Query: 494 DLPRRVFDATLDMLSGRYPS-GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 L F TL ++ P+ + FR V E + A + + GTI Sbjct: 471 GLTDEEFAWTLSLVREGSPTLRAYPEFR--RVVEHEGRCVVADARVARMHRLNIGTITSD 528 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 + + G R+G ++E V + D +I V PA Sbjct: 529 AVVQLRYWSGG------RLGSVEESYVSRLKPGDTFIFAGKKLEFSRIQDMTAYVRPAKT 582 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQ 672 + + P W G R G + L D A LA + + Q + Sbjct: 583 KVTQTPRW---GGSRLPLSGSLAAAVRRTL-DTARHGDVTSDELAAAWPVLDAQARLSR- 637 Query: 673 RNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVV 732 +P + L+ E C+ G + L+ GR VHE A +A R+ L A ++ Sbjct: 638 ------IPAADILLAETCQTRDGH-HLFLYPFEGRLVHEGLAALLALRLTRLRKATFTLS 690 Query: 733 ASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA-LLMP 791 +D G+ P LF E+L V E+V L +FR+ A A L++P Sbjct: 691 VNDYGLELLTPTPFPFEEALHPALFTRERLEADVLESVNVGELSKRQFRDIARIAGLVLP 750 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNG 850 G PG R Q + AS L ++ Y PD ++++ RE L+ ++ LER + RL Sbjct: 751 G-LPGARKSSRQVQASASLLHDVFIKYDPDNLLLVQARREVLEQQFEEGRLERTLERLQA 809 Query: 851 GEIQISDVTTTTPSPF 866 ++ V TP F Sbjct: 810 APVERIHVRRPTPLGF 825 >UniRef50_D0DB43 Dead/H associated domain protein n=4 Tax=Alphaproteobacteria RepID=D0DB43_9RHOB Length = 913 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 168/503 (33%), Positives = 239/503 (47%), Gaps = 75/503 (14%) Query: 8 SSLLPDVFSPAT--RDWFLRAFKQPTAVQPQTWHVAARSEHA--LVIAPTGSGKTLAAFL 63 + + PD+ + T + WF R Q + P + R++ L+IAPTG GKTLA FL Sbjct: 102 APIFPDMRALPTPLQGWFDRRGWQ---IHPHQSAMLERADAPCLLLIAPTGGGKTLAGFL 158 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L L R LY+SP+KAL D++RNL IP++ E Sbjct: 159 PTLAELTEA---------PRSGLHTLYVSPLKALAADIRRNLLIPIE----------EAG 199 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVH 182 + +RV RTGDTPA + + +PP IL+TTPESL L+ + A G++ V++DE+H Sbjct: 200 LPIRVEDRTGDTPASRKKRQRADPPHILLTTPESLALLTSYEDAPRMFAGLQRVVVDEIH 259 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG-GDRPVTVVNPPAM 241 A+A SKRG L L+L RL + +R+GLSATV +A L P +V Sbjct: 260 ALAESKRGDQLMLALARLQGMC-PDLRRVGLSATVEDPQTIARLLARHPDPCEIVEADPG 318 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P I ++V + + SG G Y +L++V +HR+T++F N+ Sbjct: 319 PEPDISMLV-----TEAAPPWSGGGA-----------AYSIPAVLEQVKQHRTTLIFHNT 362 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R AE + L+ A + D HHGS+ + Sbjct: 363 RAQAEIF---FHNLWLA---------------------------NEDALPIGIHHGSLDR 392 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 QR E A+ GELR +V T SL+LGID G VDLVIQ+ P +V +QRIGRA H+ Sbjct: 393 GQREKVEAAMVRGELRAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYN 452 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 SK L P R ++V+ +E + L+ P DVL Q + AA D Sbjct: 453 APSKALLVPANRFEVVECLAALEAVKEHDLDGEWRGRGPRDVLCQHILIAACAGPFGADA 512 Query: 482 WYSRVRRAAPWKDLPRRVFDATL 504 Y+ + +A + DL R FDA L Sbjct: 513 LYAEMTQAGAYADLTRAEFDACL 535 >UniRef50_D2RFY4 DEAD/DEAH box helicase domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFY4_ARCPR Length = 859 Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 224/848 (26%), Positives = 369/848 (43%), Gaps = 160/848 (18%) Query: 41 AARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTD 100 A+ + L+ APTGSGKT A + L+++ + K LYI+P++AL D Sbjct: 25 VAKGLNVLITAPTGSGKTECATIPILNKMLKMDC---------KGITFLYITPLRALNRD 75 Query: 101 VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL-Y 159 + R L+I +AD+ + + +R DT ER + PP ILITTPE+ Sbjct: 76 MIRRLKI----LADK--------LGFTIAVRHSDTSNAERRLQSLKPPQILITTPETFQI 123 Query: 160 LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS 219 L L R RE+LR V+ V+IDE+H +A SKRG LA++LERL L + Q IGLSAT+ + Sbjct: 124 LFLGRRLRESLRNVQFVVIDEIHELADSKRGVQLAIALERLREL--ANFQVIGLSATLSN 181 Query: 220 ASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 A ++A F G + VV + + R+V G++ R Sbjct: 182 AKEIAEFFGME---DVVEWNGKKVYEFRVV---------------KGDEEEIARI----- 218 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 V HRS+++FTN+R AE T G Sbjct: 219 ---------VKNHRSSLIFTNTRQTAE-----------------------------TLGL 240 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 ++ +V HH S+S++ R E+ G+L +V TSS+ELGID+G VD V+Q Sbjct: 241 KLKKMLKIEV-----HHSSLSRDVRIEAEKMFAEGKLDALVCTSSMELGIDIGHVDAVVQ 295 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHN 459 +P V +QR+GR+GH++ VSKG ++++S IV+ G +E + P Sbjct: 296 YNSPREVKRLIQRVGRSGHRLEEVSKGYIVANEFDEILESWAIVKRAKKGLIERIEPFSK 355 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF 519 PLDVLA Q V A M+ + Y V+R + DL F+ + AF Sbjct: 356 PLDVLANQIV-AMLMEGYDLGAIYEIVKRVKFYDDLSEEEFN-------------EICAF 401 Query: 520 RPK--LVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 K L+ N G +T R G + ++ IPD V+ + A + +G LDE Sbjct: 402 LEKNGLIRN---GKVT-RSGRRYFY-SNISMIPDEKKVKVV-----DTATHKVIGYLDES 451 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 V N + + WRI I D V+ +P W GE P E+ + +G Sbjct: 452 FVSLLDHN-VFAMKGELWRIVAI--DDVVRVERVESEGVVPSWLGEEIPVPFEVAQDVGK 508 Query: 638 FLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERC------- 690 + + + + EE +Q ++ + ++ V+ERC Sbjct: 509 IRRWICN------LLRSFSKEEVVDILMQEFNTDEGSCKVVLD-----VIERCLKEGYRI 557 Query: 691 -RDEI----GDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDT 745 D++ G +++++ +G +V+E A ++ +L+ ++ + + + Sbjct: 558 ATDDVVTIEGKGNVVINACFGHKVNETIA-----KLISLFLPKPFEISVEPYRIRIKGNV 612 Query: 746 DGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQR 805 D + + +K+ +++ A+ S + +F E A R + R Sbjct: 613 DADYVKDVLMKIDVDKIAELIEIALIDSKVMQYKFVEVAKRFGCLDD----------VGR 662 Query: 806 LRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSP 865 + +L+E +G PV +E L+E + D DL +++++ GEI+I +P Sbjct: 663 INIRRLIEKMRGK---PVYIEALKEVIHDRLDLDRTAFVLKKIQSGEIEILVYEECSPLS 719 Query: 866 FATSLLFG 873 + L G Sbjct: 720 KLSELRIG 727 >UniRef50_A8A8X3 DEAD/DEAH box helicase domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8X3_IGNH4 Length = 943 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 228/868 (26%), Positives = 366/868 (42%), Gaps = 149/868 (17%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R +K T VQ + + ++ L++APTG GKT AA L ++ E E Sbjct: 22 RGWKDLTEVQKKAFKPITEGKNVLIVAPTGYGKTEAAMLPIFAKMIEERPEPLS------ 75 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +LYI+P+K+L D++ ++ ER + V + GD A ERS Sbjct: 76 ---VLYITPLKSLINDLKNRIEW-----WAER-------LGFVVARKHGDVGASERSLRL 120 Query: 145 RNPPDILITTPESLYLML--TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 + P IL+TTPE + L S+ R+ + V V++DE H + GSKRG L+L LERL A Sbjct: 121 KRTPHILLTTPEGFKIDLDWASQFRKYYKNVRWVVVDEAHELVGSKRGVQLSLLLERLKA 180 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 QRI LSATV A L G + R +I V V + V Sbjct: 181 YSGRDYQRIALSATVGDPEATAKLLFGS---------SSREKEI---VKVNVKRKIELVV 228 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 GE A E S W IL+ V T+VF N+R AE+L L+++ +++ Sbjct: 229 DSIGE---AREEDSFWKASAKKILEHV--EPPTLVFVNTRYAAERLHEELSKIEGLKVE- 282 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 HH S+SKE R E+ LK G+L V+AT Sbjct: 283 -------------------------------VHHSSISKEIRQEIEKNLKDGKLDVVIAT 311 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 +LELGID+ ++ VI P SVAS LQR+GRAGH++GGVS+G+ + +D Sbjct: 312 KTLELGIDISDLNKVILFKPPGSVASLLQRVGRAGHKLGGVSRGVIITTDEIEALDGYTE 371 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW-YSRVRRAAPWKDLPRRVFD 501 G +E P PLDVLA++ + + W Y V+ A P+++L + FD Sbjct: 372 AVLAVKGIVEPPKVPDAPLDVLAREIIGMTLQEKRLDPSWAYEVVKGAYPYRNLTKETFD 431 Query: 502 ATLDML-SGRYPSGDFSAFRPKLV----WNRETGILT--ARPGAQLLAVTSGGTIPDRGM 554 +++L + + D + + W+ + G +R + +V S +R + Sbjct: 432 ELINVLVKNKILAWDGDKLKVSYMFYKLWSFDGGEKKRWSRSFGEFFSVIS-----ERDV 486 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRD--QVIVTPAP 611 + V K G++ VG+LD VY+ R I LG +W++ I + +V V PA Sbjct: 487 FVV-------KWGNKVVGDLDAFYVYKYLRPESKIRLGGKTWKVIGIDDEGMKVYVEPAT 539 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLH--------LLADGAFFSGTIPPWLAEENTIA 663 + +P W+GE R + + E L LL D Sbjct: 540 DQMGEIPLWKGEEFHRSSLIPEYAKRVLEEEKPKEVKLLPDAE----------------K 583 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 ++ + E + +PG LE+ G + +L +R+ E A I ++ + Sbjct: 584 KVRKVFESYKRKNIDLPGGDVYYLEKVP---GGY--VLTGFMDQRLAEALAHLIMYKVSS 638 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 + SV +S GI + G+ P+ L E + + +R+A+ S + Sbjct: 639 EYTTAVSVRSSFTGIAVTV--DGGEAPNPIKLLKEIDDVEDAIRKAMERSPYLV----QT 692 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALER 843 A L G+ G TP D V E +++ ++ D+ ++ Sbjct: 693 AKEIQLSFGKL-GKVTP------------------DDGLVFEEAVKQAIEKYIDVEKAKK 733 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLL 871 + L +I++ + + +P A ++ Sbjct: 734 FIEMLKEKKIKVKLIKAKSLTPLAAHVM 761 >UniRef50_A1RYY4 DEAD/DEAH box helicase domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYY4_THEPD Length = 946 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 229/843 (27%), Positives = 369/843 (43%), Gaps = 129/843 (15%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 +++ VQ ++ ++ + L+ APTG+GKT AA L L L +GG K Sbjct: 36 GYRELNYVQVKSLELSRVYPNMLISAPTGAGKTEAAVLPVLRDLVEKGG---------KP 86 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 LY++P++AL D+ + + + E +R GDTP + R ++ Sbjct: 87 IYALYVTPLRALNRDIYDRMVELFRALGFE------------AEVRHGDTPQRVRRRIAE 134 Query: 146 NPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 +PP +LITTPE+ +L++ R RE L+ V++DEVH + KRGA L+L+LERL L+ Sbjct: 135 SPPHMLITTPETTQFLLVDGRYREHLKNTRWVVVDEVHELLDDKRGAQLSLALERLR-LI 193 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG 264 + +GLSAT+R L G R TVV + ++ V ++D+ Sbjct: 194 SPGLRVVGLSATLRDPEAALRLLSGGRVGTVVEWFERKAYEL----VVEDIDE------- 242 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 E AGR + E+ R IVFTN+R AE + Sbjct: 243 --EGDLAGRVKRV---------AELCRGGGVIVFTNTRDTAEFI---------------- 275 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFI-ARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 RV + D + R HHGS+S+++R E+ KSG + +VATS Sbjct: 276 -----------------GRVLARDYGLNVRVHHGSLSRQEREEAERLFKSGRVDAIVATS 318 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV 443 SLELG+D+G LV+Q +P QR+GRAGH + VS+G+ P D V+SAV+ Sbjct: 319 SLELGVDIGYARLVVQFGSPRQAIKLAQRVGRAGHSLSEVSRGVIVPLYLEDAVESAVLA 378 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW--YSRVRRAAPWKDLPRRVFD 501 ++ LE PLDVL+ Q VA ++ +D + + V R+AP++DL Sbjct: 379 RRVYLRALEKQGFHEKPLDVLSHQ-VAGLVLEYRDLDVYTVHEVVTRSAPFRDLSLGELK 437 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 L+ L F R K+ R T ++ G S IP+ + V+ Sbjct: 438 QLLEFLDS-LGVVRFDGERVKM--GRRT--ISYYYG-------SASMIPETLSFDVV--- 482 Query: 562 GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD--QVIVTPAPGRSARLPF 619 + A R +G LD +I LG +W ++++ D +V V P Sbjct: 483 --DMASRRTIGALDYAFASLVDKGRVIILGGKAWTVEEVDVDANKVYVVENVEEFGEPPI 540 Query: 620 WRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAE----ENTIANIQGLIEEQRNA 675 W G A++ +G + + + E E + +IEE++ Sbjct: 541 WTGMTLPVDAKVAREVGSLYRRIGESLGNPEELEKLRKEYAIPEKAFEKLVRIIEEEKRL 600 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 G+VP R+ V E + G I LHS G + + A+ +A + G+ A A Sbjct: 601 LGVVPSDRNAVAEVASYK-GKTAITLHSYLGTKGNNLLALLLAHAVRGYTGSSARYFADP 659 Query: 736 DGIVARIPDTDGKLPDAAIFLFEPEKL---LQIVREAVGSSALFAARFRECAARALLMPG 792 ++ T+ ++PD + L L+ + E V S +A F A++ ++ Sbjct: 660 YRVLV---VTEYEVPDQRVLESLRSGLEWSLRNLEEVVRESNSYALAFSHVASKMGVVDV 716 Query: 793 RT----PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRL 848 + PG + L ++R+R + P+ E LR CL + +DL A+E +R + Sbjct: 717 KKSKPEPGLMSSL-RKRMRGT------------PLDREALRTCLFEYFDLEAVEEFVREV 763 Query: 849 NGG 851 + G Sbjct: 764 SEG 766 >UniRef50_Q3IP60 Lhr-like helicase n=5 Tax=Halobacteriaceae RepID=Q3IP60_NATPD Length = 949 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 229/855 (26%), Positives = 368/855 (43%), Gaps = 119/855 (13%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R F PTA Q + A E LV+APTGSGKT A L L + +E R Sbjct: 29 RGFSTPTAPQRKAIPTLAAGESGLVVAPTGSGKTETAMLPVLSSI--------QERPPRH 80 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 + LYI+P++AL D++ L+ GET + + + +R GDT +R K Sbjct: 81 GIQALYITPLRALNRDMRERLEW-----------WGET-LGIDIDVRHGDTTDYQRQKQA 128 Query: 145 RNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 +PPD+L+TTPE+L M T + R + +E +++DEVH +AGSKRGA L + LE L Sbjct: 129 EDPPDVLVTTPETLQAMFTGEKLRRAIEDIEHIVVDEVHELAGSKRGAQLTVGLEHLRE- 187 Query: 204 LHTSA-QRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 H QRIGLSATV ++V FL GDR V + A + + + P +D ++ Sbjct: 188 -HAGPFQRIGLSATVGDPTEVGRFLTGDRGCHVTDVEAGTNLDVTVRTPEIRPEDRTA-- 244 Query: 263 SGTGEDSHAGR---EGSIWPYIETGILDEVLR-HRSTIVFTNSRGLAEKLTARLNELYAA 318 AG + + ++ ++DE++ H S ++F N+R AE L +RL Sbjct: 245 --------AGELLTDAEVASHVR--VIDELVDAHDSVLIFVNTRQTAEGLGSRL------ 288 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + +++ I HHGS+SK R E A K+GE+ Sbjct: 289 ------------------------KAYGTNIGI---HHGSLSKSARIDVEDAFKTGEIDG 321 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 ++ TSS+ELGID+G +D VIQ A+P V LQR+GRAGH+ S G D + Sbjct: 322 LMCTSSMELGIDVGDIDHVIQYASPREVRRLLQRVGRAGHRRDETSSGTVITTHPDDTFE 381 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPR 497 + IV+ G +E+ H LD +A Q + L Y + RA P+++LP Sbjct: 382 ALSIVDRAERGAVESAGIHHGSLDTVANQIAGLLMGFEELPAARAYEILTRAYPFRNLPE 441 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG-GTIPDRGMYS 556 F A + LS +++W E + G + IPD Y+ Sbjct: 442 EQFKAVVRELS-----------ENRILWLEEGDDRIEKSGGTWQYFYANLSMIPDEANYT 490 Query: 557 VLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWR--IQQITRDQVIVTPAPGR 613 V + A VG L E V + + G WR ++V+V+P Sbjct: 491 VT-----DMASGDPVGTLAERFVVTFAEPGETFVQGGEMWRITEIDDEEEEVLVSPIEDP 545 Query: 614 SARLPFWRGEGNGRPAELGEMIGD--------FLHLLADGAFFSGTIPPWLAEENTIANI 665 + +P W G+ P + E + F GA + +E+T + Sbjct: 546 TGEVPSWVGQEIPVPRGVAEAVATARADARGRFDGGDGRGAVARSVADRYPTDEHTASEA 605 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 +E + G +P +V+E +I+L++ +G +E ++ I Sbjct: 606 LKPVEAHK---GPIPTPDRIVVEGF-----GRQIVLNAAFGHTANETLGRLLSALIGQQT 657 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFL--FEPEKLLQIVREAVGSSALFAARFREC 783 G ++ I +P + + D L +P+ + +V ++ ++ + Sbjct: 658 GGSVAMEVDPYRIELEVP-SGTSIGDVVELLETTDPDHVPTLVELSLKNAETLKFTLAQV 716 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALER 843 AA+ + R G T Q R +LL + D P+ E +R L + D+ Sbjct: 717 AAKFGALK-RWKG--TGSSQNRFGKDRLLAALE---DTPIYDEAVRVVLHEQLDVDGASD 770 Query: 844 LMRRLNGGEIQISDV 858 ++ RL G+I+++ V Sbjct: 771 ILSRLQSGDIELATV 785 >UniRef50_A4YHK3 DEAD/DEAH box helicase domain protein n=12 Tax=Sulfolobaceae RepID=A4YHK3_METS5 Length = 931 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 224/859 (26%), Positives = 381/859 (44%), Gaps = 165/859 (19%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R + + T +Q R + L+IAPTG GKT AA L L L EG ++K Sbjct: 16 RNWTKMTQIQEMAMEPILRGNNTLIIAPTGFGKTEAALLPILS-LMSEG--------EQK 66 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 ++Y++P+KAL D+ + +++ V + G+ P +E++ Sbjct: 67 PVSLIYVTPLKALINDITIRIDW------------WASKLGFVVSRKHGEVPQKEKNMRL 114 Query: 145 RNPPDILITTPESLYLML--TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 R P IL+TTPE L + + S+ R+ R V+ VIIDE+H + GSKRGA L + LERL Sbjct: 115 RKAPHILVTTPEGLEIDMDWASKFRDNYRNVKWVIIDEIHELMGSKRGAQLFVLLERLKD 174 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 QRIGLSAT+ + VA L G RP T+V A + +++I Sbjct: 175 FSGKDFQRIGLSATISNEELVANTLFGSSSRPKTIVKSEAGKEFRLKI------------ 222 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 + +DS G +W I+ E L T+VFTNSR L E+L L Sbjct: 223 ---RSIKDS-----GDVW-VASAKIIKESL-EPPTLVFTNSRFLTERLHEEL-------- 264 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 R+ +F+ HH S+S++ ++ E+ L+SG+ V+ Sbjct: 265 ---------------------ERLGEKGIFV---HHSSISRDSKSNAEENLRSGKAGAVL 300 Query: 381 ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSA 440 T +LELGID+G V +I P SVAS LQR+GR+GH VGG+ G D +++ Sbjct: 301 CTKTLELGIDVGKVKKIIMYRPPPSVASFLQRLGRSGHCVGGIPYGEIICVQDFDCLEAL 360 Query: 441 VIVECMFAGRLENLTPPH--NPLDVLAQQTVAA-AAMDALQVDEWYSRVRRAAPWKDLPR 497 I G+LE PP PLDV+A++ + +++++ +S + + ++DL R Sbjct: 361 AIYSLSRKGKLE---PPRRVRPLDVVAREILGMLLQYSSIKLERVFSIITASQVYRDLTR 417 Query: 498 RVFDATLDMLSGR---YPSGDF----SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 F + L GD +F +NR + A+ ++ ++ S Sbjct: 418 EEFQNLISYLQRNNLVVVEGDELKLGKSFFKIWTFNRSNNFVWAKNFSEFFSLIS----- 472 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRDQVIV-- 607 + +++ ++G + +GE+D VY+ R D+I + W++ +I ++V Sbjct: 473 NDDAFTL-------RSGEKIIGEIDAIYVYKHIRPGDLIRISGKLWKVARIHNGMMMVDL 525 Query: 608 TPAPGRSARLPFWRGEGNGR----PAELGEM--IGDFLHLLADGAFFSGTIPPWLAEENT 661 TPA +P WRGEG + P E+ E+ IGD + + +++ Sbjct: 526 TPADRGEGEIPIWRGEGVPKSQLIPREIQELFKIGD------------KILESEILDDSA 573 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 A+++ L+E+ + +P S + + + D + + RV A + Sbjct: 574 KASLKALMEKYVRSKLPLPSSSTIYM-----TVTDKETVYSTLIDERVANTIAHMLMYLA 628 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + + + AS G I D D ++RE V + R R Sbjct: 629 SSKYTLNVYTRASIYGFSINITDRD------------------LLRELV---QMKEERIR 667 Query: 782 ECAARALLMPGRTPGHRTPLW---QQRLRASQLLEIAQGYP--DFPVILETLRECLQDVY 836 + R++L R+PL+ ++ ++AS +I + P D +I E LR+ ++ + Sbjct: 668 KILFRSIL--------RSPLFMSVEKEIQAS-FGKIGKINPKEDKLIIKEGLRQTVKRYF 718 Query: 837 DLPALERLMRRLNGGEIQI 855 ++ ++R+ G+I+I Sbjct: 719 NIKGTLTTLKRIREGKIRI 737 >UniRef50_B5IHC0 DEAD/DEAH box helicase domain protein (Fragment) n=5 Tax=Euryarchaeota RepID=B5IHC0_9EURY Length = 351 Score = 212 bits (540), Expect = 8e-53, Method: Composition-based stats. Identities = 136/388 (35%), Positives = 205/388 (52%), Gaps = 59/388 (15%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF + + T Q + ++ LV +PTGSGKTL AF+ ++ LF Sbjct: 16 LFDPIIGEWFTSKYSELTEPQAYAIPLIHSGKNVLVSSPTGSGKTLTAFISIINELFLLA 75 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 E E +Y+SP+KAL D+ RNL++PL+ I D + +G +RV +R+G Sbjct: 76 KEGKLE----DKVYCVYVSPLKALANDIHRNLEVPLEEIKDLAKSKGVKIPKIRVAVRSG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 DT ER K+ R PP I ITTPESL L+LT+ + RE+ R V VI+DE+H +A +KRG Sbjct: 132 DTSTAERQKMLRKPPHIFITTPESLSLVLTAPKFRESFRDVRYVIVDEIHELANNKRGVM 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIR 247 L+L+LERL L + QRIGLSAT ++A +L G R V++V + ++ Sbjct: 192 LSLNLERLQ-YLAKNFQRIGLSATQAPIEEIAKYLVGYEGEEPRNVSIVEVEVRKKLDLK 250 Query: 248 IVVPVANMDDVS-SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 ++ PV ++ V VA+ D ++D + RHR+T++FTN+R E Sbjct: 251 VITPVEDLTLVPYEVANEKMYDV---------------LVDIINRHRTTLIFTNTRSGTE 295 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + +L E L+ +HHGS+SKE R Sbjct: 296 HVAYKLKEKGIENLE--------------------------------AHHGSLSKETRLR 323 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAV 394 E+ALK G+L+ V++++SLELGID+G + Sbjct: 324 VEKALKEGKLKAVISSTSLELGIDIGYI 351 >UniRef50_B4RRM3 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=5 Tax=Proteobacteria RepID=B4RRM3_ALTMD Length = 868 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 196/673 (29%), Positives = 288/673 (42%), Gaps = 142/673 (21%) Query: 11 LPDVFSP--ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL----- 63 LP FS + W LR ++Q T + + H + L+IAPTG+GKTL+ FL Sbjct: 4 LPAAFSKWFKQKGWQLRDYQQ-TMLTEKDQH-----DCTLLIAPTGAGKTLSGFLPSLIE 57 Query: 64 ----YALDRLF--------------------REGGEDT------REAHKRKTS------R 87 Y + L RE E R+A K K Sbjct: 58 LAETYGMSELAETVDDGAPIEVSETRQLSGSRETDEHVETKATDRQAKKGKEKGGFNGLH 117 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 LYISP+KAL D+ RNL P++ E + + RTGDTP+ +R + + P Sbjct: 118 TLYISPLKALTQDIHRNLLQPIE----------EMGLPITAETRTGDTPSHKRQRQRKKP 167 Query: 148 PDILITTPESLYLMLTSRARETLRG-VETVIIDEVHAVAGSKRGAHLALSLERLDALLHT 206 P+IL+TTPESL LML+ + L G ++ VIIDE H++ +KRG L+L+L RL ++ Sbjct: 168 PNILLTTPESLMLMLSYADADKLFGKLKRVIIDETHSLMANKRGDFLSLALARL-SVFSP 226 Query: 207 SAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT 265 +RIGLSATV + A+L G D ++ A P++ ++ + M +A Sbjct: 227 HCKRIGLSATVAFPETLGAWLAGSDSVANIIKVKAGEKPKVEMLHSKSRMPFGGFMARYA 286 Query: 266 GEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS 325 +D I+ IE ++T+VF N+R +E L L E A L Sbjct: 287 IDD--------IYQAIENA--------QTTLVFVNTRAQSELLFQMLWEANKAAL----P 326 Query: 326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSL 385 IA+ +HGS+SKEQR TE + SG LR +V TS+L Sbjct: 327 IAL--------------------------YHGSLSKEQRRKTEAMMASGMLRAIVCTSAL 360 Query: 386 ELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC 445 ELGID G VD VIQV P V+ LQRIGRA H++ S+ L P R + ++ + Sbjct: 361 ELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLDEPSEALLVPANRFEALECQAAITA 420 Query: 446 MFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 + G L+ +P LD++ Q + A D Y + A P++ L R FD Sbjct: 421 IEKGELDGESPQPGALDIIPQFILNCLCSKADSPDTLYQEILTATPYQGLDRDDFDKLWQ 480 Query: 506 MLS---------------GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 R G FS +++ I GTI Sbjct: 481 FTQDGGSALNAYERYQRLARNDDGTFSPANRRVIQRHRQNI---------------GTIV 525 Query: 551 DRGMYSVL-LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 + G V + G + + +GE++E + D G R + I Q+ P Sbjct: 526 EAGRLKVKRIRRGNQ---GKIIGEVEEYFAQQLTPGDTFYFGGEVLRFEAIRDMQLHAKP 582 Query: 610 APGRSARLPFWRG 622 A + ++P + G Sbjct: 583 AKAKEPKIPSYAG 595 >UniRef50_Q8TGY8 Lhr-like Superfamily II helicase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY8_METKA Length = 910 Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 210/635 (33%), Positives = 276/635 (43%), Gaps = 116/635 (18%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL--YALDRLFREGGEDTREAHKRK 84 F +PT Q ++ LVIAPT SGKT A L +++ R E G Sbjct: 20 FDEPTPPQRVAIPEIMDGKNVLVIAPTSSGKTETAVLPVFSMVRELDEPG---------- 69 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 + LYI+P++AL D+ R + R GE ++ L V +R GDTP ER + Sbjct: 70 -IKALYITPLRALNRDILRRI-----------RWWGE-KLGLEVAVRHGDTPQSERRRQA 116 Query: 145 RNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 +PPD+L+TTPE+L +L R RE L V VI+DEV+ +A KRG L L LERL A Sbjct: 117 EDPPDVLVTTPETLQAILPGKRMREHLSHVRHVIVDEVNELALDKRGVQLTLGLERL-AE 175 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS 263 + QRIGLSA V S V FL GDR V V+ A R+ + SVA Sbjct: 176 VAGDFQRIGLSAAVGSPDRVGKFLVGDRDVEVLEIEAERYLDV-------------SVAH 222 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHR-STIVFTNSRGLAEKLTARLNELYAARLQR 322 TG H +E ++ E+ + R S +VFTN+R +AE L RL Y Sbjct: 223 PTG--PHEVKE-------RLELIHELAKERDSVLVFTNTRQMAELLATRLKTEY------ 267 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 D HH S+S+E+R E+ K GE+ +V T Sbjct: 268 -------------------------DDIEVEIHHSSISREKRMEVEKRFKKGEIDVLVCT 302 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SSLELGID+G VDLV+Q +P V +QR+ + ++GL DL ++AVI Sbjct: 303 SSLELGIDIGHVDLVVQYGSPRQVTRLVQRV-GRAGRRRKRAEGLVITSNPDDLAEAAVI 361 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR--VRRAAPWKDLPRRVF 500 G LE P LDVLA Q V +D QV Y+ RRA P++ L Sbjct: 362 CRRALKGSLEPTEIPEGCLDVLAHQLV-GLCLDGHQVTVDYALEVFRRAYPYRHLDAETL 420 Query: 501 DAT---LDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 LD + GD +R K W L+ IPD Y V Sbjct: 421 REVAEFLDDIEVLRVRGD-RVYRTKDAWKYYYSNLS--------------MIPDERHYRV 465 Query: 558 LLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRD--QVIVTPAPGRS 614 + G V LDE V E R W +Q + D +V+VTPA Sbjct: 466 VTESGG------HVSVLDEPFVLEYLRPGIKFICAGRPWIVQDVDHDRYEVLVTPAEAVE 519 Query: 615 ARLPFWRGEGNGRPA----ELGEMIGDFLHLLADG 645 +P W GE P E+GE IG L DG Sbjct: 520 GAIPSWVGEEIPVPYEVAREVGEGIGRAEAALEDG 554 >UniRef50_Q7UX43 Putative ATP-dependent helicase n=1 Tax=Rhodopirellula baltica RepID=Q7UX43_RHOBA Length = 860 Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 225/874 (25%), Positives = 372/874 (42%), Gaps = 93/874 (10%) Query: 29 QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS-R 87 +P Q TW + LV + TG+GKTLA ++ L + + + + KR + Sbjct: 56 KPFLFQRSTWKTYLDGKSGLVHSATGTGKTLAVWMGPLLQWMKANKDPGKWNPKRPPGLQ 115 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI--RTGDTPAQERSKLTR 145 +L+++P+KAL D +Q + E+NL + RTGDT A +++ + Sbjct: 116 VLWVTPLKALAGDTTAAMQAAID------------EMNLPWDLQGRTGDTKASLKARQMK 163 Query: 146 NPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 P ++TTPESL LMLT R + L ++ VI+DE H + G+KRG L+L RL L Sbjct: 164 RLPTAMVTTPESLTLMLTHERLQPQLSELKAVIVDEWHELLGTKRGVQTELALARLRRLS 223 Query: 205 HTSAQRIGLSATVRSASDVAAFLGG----DRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 T Q G+SAT+ + + L G D V + + I+ PV S Sbjct: 224 PT-LQTWGVSATLGNLDEALESLVGPANTDDAVIIHGKSKKKTKLYSILPPVIERFPWS- 281 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 G I + + EV + S+++F N+R E +L A R Sbjct: 282 --------------GHIGTRMIPEVAKEVEQASSSLIFANTRSQTE---IWYQKLLAHRP 324 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 + IA+ HHGS+ R E L+ G L+ VV Sbjct: 325 DWAGQIAL--------------------------HHGSLDTSVRQWVENGLREGSLKTVV 358 Query: 381 ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSA 440 TSSL+LG+D AVDLVIQ+ +P A LQR GR+GHQ G +S+ F P +L++ A Sbjct: 359 CTSSLDLGVDFTAVDLVIQIGSPKGAARLLQRAGRSGHQPGAISRLAFVPTNAFELIELA 418 Query: 441 VIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF 500 + + G+LE+ +P+DVL Q V A + E + VR+ ++ L + + Sbjct: 419 AAQDSIRDGKLESRPLIKSPMDVLTQHLVTIAIGGGFESSELLAEVRQTRAFESLSEQQW 478 Query: 501 DATLD-MLSGRYPSGDFSAF-RPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 +D ++ G + F R +LV R ++T + + G + D M Sbjct: 479 QFAIDFVVRGGSTLDAYPEFKRVELVDGRY--VVTQKRVMSNHRMNIGTIVSDASMRVKF 536 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 L G +G ++E + + + D + +I + V A G +P Sbjct: 537 LKGGT-------LGTVEESFLSKVSIGDKFLFAGRLVELVRIDNSEAYVKRAKGAPDAVP 589 Query: 619 FWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGI 678 W G +EL + + L A+G + + P + + +Q Sbjct: 590 RWMGGRLPLSSELAQGLRTKLQQAAEGDY----VGPEMKRMRPLLQLQAKWSH------- 638 Query: 679 VPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI 738 VP + L++E R G +++ + GR HE + +A R+ + S +D G Sbjct: 639 VPAANELLIESIRTRDG-YQLFFYPFAGRLAHEGLSAVLAHRMSRIEKISFSFACNDYGF 697 Query: 739 VARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR 798 V P L P++L+ + E++ ++ + FR A A L+ G PG + Sbjct: 698 VLTSPKPAPLQQALDAGLLSPDRLVADIGESLNATEMSRRGFRAIARIAGLIHGGYPGRQ 757 Query: 799 TPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 P + ++ E+ + Y PD ++ + E L++ + +E +RR+ G ++ I + Sbjct: 758 KPNKHLQASSNLFFEVFREYDPDNLLLHQCNEEVLENQLNASRMEDALRRIEGSQVVIRE 817 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 TP F LL + E + S LAER A Sbjct: 818 PEKVTPMGFG--LLVDRLRERL--SSETLAERIA 847 >UniRef50_C1YNJ7 Putative uncharacterized protein n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YNJ7_NOCDA Length = 381 Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 153/404 (37%), Positives = 207/404 (51%), Gaps = 34/404 (8%) Query: 1139 VMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVA 1198 + +E L G + AS E+ +LP+RV DY+ LDEL G V+W+G L DG V Sbjct: 1 MFEAVESLRGATVAASALETLVLPSRVEDYAPRRLDELTQAGEVVWAGAGALPGQDGWVC 60 Query: 1199 LHLQEYAA----ESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGES-V 1253 L + AA E P E A+ A++ L GGA F + ++ R+ G S V Sbjct: 61 LAPADEAALLLPEPVPPREGSTAH------AVLEALRGGGALFFRDVADRVAGASGGSAV 114 Query: 1254 DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPR 1313 + L ALW LVW G +T+D APLRA+ S + R + R+ R A+PV P Sbjct: 115 TDAELVAALWELVWSGCVTNDTLAPLRAVLGSGAAPRRAPSRAGR-------LARPVLPT 167 Query: 1314 VSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGG--FPSMQ 1371 S P AGRW L + T R+LA E L+R G++ R GG P Sbjct: 168 RS-GPPAAAGRWWALPEREGDPTRRVLARLEARLERRGVLVR------GYQGGRISPDEY 220 Query: 1372 TLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPAN 1431 + R+ME+SGR+ RG FV+GLGGAQFA +DRLR ++ A + PV L+A DPAN Sbjct: 221 RVLRTMEESGRVRRGYFVDGLGGAQFALPGAVDRLRAVSGGAAE-----PVVLAATDPAN 275 Query: 1432 VWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHA 1491 +G LPWP A P R AG+LVVV GG+L LY+ +GG+ +L + LL A Sbjct: 276 PFGTDLPWPGD-AQARPGRSAGSLVVVDGGRLTLYVGRGGRSVLTFGSPPALLE-RAARA 333 Query: 1492 LTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 L A+R T+ + V TP+ L AGF +P+GL Sbjct: 334 LAGAVRDGRAGALTVERADGAEVFATPVDAALAAAGFHVTPKGL 377 >UniRef50_A9WLQ1 ATP-dependent helicase n=3 Tax=Micrococcaceae RepID=A9WLQ1_RENSM Length = 409 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 144/395 (36%), Positives = 197/395 (49%), Gaps = 39/395 (9%) Query: 971 LENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLR 1030 + L+ R F + I+GQ L ++DAAR+RDALG+ LP +P ++ V PL DL R Sbjct: 3 ITELVKANRAFTSKIAGQSVLLAVEDAARVRDALGLPLPMGIPLAFIEPVLDPLGDLVSR 62 Query: 1031 YLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-QDI----------WVSDE 1079 Y R H ++A F LG+AIV+ L +L G V+ + + I W + Sbjct: 63 YARTHGPFLTSEVAARFGLGVAIVQSALDRLGADGRVVQGEFRPIATQGGATGLEWCDAQ 122 Query: 1080 VFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGV 1139 V RR+R RSL A R PV YAR L Q + + G DGV Sbjct: 123 VLRRIRQRSLAALRAEVEPVDRAAYARFLPAWQHINSSLRGH---------------DGV 167 Query: 1140 MRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVAL 1199 + VI+QLAGV +P S E +L RVRDYS +LDEL+A+G V+WSG L +DG ++L Sbjct: 168 LTVIDQLAGVPIPVSAVEPLVLAVRVRDYSPALLDELMASGEVLWSGAGSLPGNDGWISL 227 Query: 1200 HLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQ 1259 HL E AA + +PAE AL+ + L+ GGA+F QQ+ + D E AL Sbjct: 228 HLAESAALTLSPAEDYMPGALALR--VQEFLSSGGAYFFQQLRLGLSDT--ELPSNEALT 283 Query: 1260 EALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR-------PVYAQPVSP 1312 ALW LVW G + ++ +AP+R + A R+ R R GR YA P Sbjct: 284 SALWELVWAGRVGNETFAPVRGMLDGGHTAHKQKARTPRLRPGRLPGAQGAGRYAGLSRP 343 Query: 1313 RVSYNTPNLAGRWSLLQV--EPLNDTERMLALAEN 1345 +P + GRWS V E L T R A+A+ Sbjct: 344 ATPMGSPMVGGRWSSFAVATEVLEPTVRAHAMADT 378 >UniRef50_B6YUR4 Large helicase-related protein n=5 Tax=Euryarchaeota RepID=B6YUR4_THEON Length = 1389 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 148/421 (35%), Positives = 214/421 (50%), Gaps = 76/421 (18%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAA--RSEHALVIAPTGSGKTLAAFLYALDRLF 70 ++ S R+WF R F T PQ + V + E+ L+ +PTGSGKTL+AFL A++ L Sbjct: 20 EILSEPVREWFKRKF--GTFTPPQRYAVIEIHKGENVLISSPTGSGKTLSAFLAAINELI 77 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 G +E +LY+SP++AL D++RNL+ PL I + + G +RVGI Sbjct: 78 LLG----KEGKLDDKIYVLYVSPLRALNNDIKRNLEGPLAEIKEVAKELGYELPEIRVGI 133 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKR 189 RT DT + E+SK+ R PP ILITTPESL + L + + RE LR V+ +IIDEVHA+A +KR Sbjct: 134 RTSDTSSYEKSKMVRKPPHILITTPESLAIALNAPKFRERLRTVKYLIIDEVHALAENKR 193 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL------GGDRPVTVVNPPAMRH 243 G+HLALS+ERL L + RIGLSAT+ +VA F+ G RP +V+ + Sbjct: 194 GSHLALSIERLANLAESEFVRIGLSATIHPLEEVAKFVFGFDDEGKPRPGLIVDVSFAKE 253 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSR 302 +I + V +D+ +GT D+ R L E++R HR+T++FTN+R Sbjct: 254 TRIWVESVV---EDLIYTDAGTLSDALYKR------------LAELIREHRTTLIFTNTR 298 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 AE++ L + Y FE + +HH S+S+E Sbjct: 299 SGAERVAFNLKKRY--------------PEFEG---------------LIEAHHSSLSRE 329 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 R E+ LK GEL+ VV + + A G +RI R G + Sbjct: 330 VRLDVEEKLKRGELKAVVCVPG----------------HSKIFTAEGTRRIDRLGEKTAI 373 Query: 423 V 423 V Sbjct: 374 V 374 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 165/603 (27%), Positives = 274/603 (45%), Gaps = 48/603 (7%) Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 A +QR +A F +R++S + + +G ++ E S Sbjct: 821 AEIQRLKELAEGDVFF--------DRIESIEPVFIKEAYGILNSETGNYVVNGFVSKN-- 870 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLV 437 +++SLELGID+G +DLVI + +P SV LQRIGRAGH++ VSKG+ R DLV Sbjct: 871 ---SSTSLELGIDIGTIDLVILIGSPKSVNRALQRIGRAGHRLHDVSKGIILALDRDDLV 927 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 + V+ RL + P NPLDVL Q + A +VDE Y VRRA P+ DLP Sbjct: 928 EVTVLAHNARNRRLNRVRIPRNPLDVLVQHLLGMALNQVWEVDEAYKLVRRAYPFHDLPY 987 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNR---ETGILTARPGAQLLAV--TSGGTIPDR 552 F + L +Y +G+++ K V+ + E G R G A+ + GTIPD Sbjct: 988 EDFMSVL-----KYLAGEYAGLEEKKVYAKIWLEDGKF-GRRGKMTRAIYYMNVGTIPDE 1041 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 V + + +G ++EE DI L ++ + +++ V P G Sbjct: 1042 AKIKVYTMD------KKLIGTVEEEFAERLMPGDIFVLAGRTYEFIKSRGNKIYVIPREG 1095 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDF----LHLLADGAFFSGTIPPWLAEENTIANIQGL 668 +P W E +L + F +LL + S + +E I Sbjct: 1096 AKPTIPAWFSEMLPLSFDLALDVQRFRREVKNLLDKESAKSLLTKKYGIDERAARAILSY 1155 Query: 669 IEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 EQ + ++P +++E E + R H+ GRR ++ + A A + + Sbjct: 1156 FREQARYS-VIPDDSTVLVEEVLGEKRN-RYFFHTLIGRRANDALSRAFAYIVSQWKNCN 1213 Query: 729 ASVVASDDGIVARIPDTDGKLPDAAI-FLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 + +D+G +P + +L + I LFE L +++A+ ++ L RFR A R Sbjct: 1214 VGIAINDNGFALLLP-PEKRLNEEEIRALFEIGDLRGTLKKALDNTELLKRRFRHVANRG 1272 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEI-AQGYPDFPVILETLRECLQDVYDLPALERLMR 846 LL+ R G L +Q++ A LL++ + YPDFP++ E RE ++D D+ + E+ + Sbjct: 1273 LLILRRYIGRSKRLGRQQMMAVALLKVLKENYPDFPLLKEVYREIMEDKMDVESAEQFLS 1332 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLG 906 + G++++ PSPFA +L E + SD L E R ++ +L R ++ Sbjct: 1333 WVRDGKVRVVIEHNELPSPFAFNL------EVIGSSDVVLMEDRRELI---KQLHRKIMA 1383 Query: 907 QVD 909 ++ Sbjct: 1384 MIE 1386 >UniRef50_Q470G5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=36 Tax=Bacteria RepID=Q470G5_RALEJ Length = 898 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 263/919 (28%), Positives = 383/919 (41%), Gaps = 120/919 (13%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + P + LPD+F A R W QP Q W + + L+ A TG+GKT A Sbjct: 15 LTSAPPVARKLPDLF--AARHW------QPFDFQRAVWEAIGQGQSGLLHATTGTGKTYA 66 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A+L AL +R +L+++P++AL D R L PL G Sbjct: 67 AWLGAL---LAFASPPSRPGAPPPPLTVLWLTPMRALAADTTRALIAPL----------G 113 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIID 179 E ++ VG+RTGDT + ER+ R P L+TTPESL L+LT + ARETLR V V++D Sbjct: 114 ELGLDWAVGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADARETLRSVRLVVVD 173 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS---ASDV-AAFLGGDRPVTV 235 E H + GSKRG + L+L RL GLSAT+ + A DV A + +R V V Sbjct: 174 EWHELIGSKRGVQVQLALARLHR-WQPDLCVWGLSATLGNLDHARDVLLAGVSPERRVLV 232 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 P+ I+ + + D +S G H G S+ P+ ++ E+ +T Sbjct: 233 HG----HTPKTLIIDTL--LPDAASRFPWAG---HLGL--SMLPH----VVRELEASGTT 277 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 +VF N+R AE Y A L P A + H Sbjct: 278 LVFLNTRSQAEL-------WYQALLDAKPEWA----------------------GLIALH 308 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGS+ + R EQ LK+G LR VV TSSL+LG+D V+ V+Q+ +P VA LQR GR Sbjct: 309 HGSLDRAVREWVEQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGR 368 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 +GH G S+ P +LV++ + AGR+E P PLDVL Q V A Sbjct: 369 SGHAPGRASRVTVVPTHSLELVEAVAARQAALAGRIEARDSPDKPLDVLVQHLVTVALGG 428 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKL---------VWN 526 + E + VR ++ L + L + R G SA+ P VW Sbjct: 429 GFRASELLAEVRTTWAYRALTDEEWQWCLAFV--RDGGGTLSAY-PDYRRAMPDDDGVWR 485 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVND 586 L R + + S T+ R +G +G ++E + D Sbjct: 486 VPDARLARRHRMSVGTIVSETTMQVRYWT-------RAGSGGASLGTVEEGFIARLAPGD 538 Query: 587 IITLGATSWRIQQITRDQ---VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA 643 G R+ ++ R Q V A G+ +P W G EL + + L + Sbjct: 539 CFLFGG---RLLELVRTQEMTAYVRRATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQ 595 Query: 644 DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHS 703 G P + IQ L+E Q + + P L+ E G W + L+ Sbjct: 596 AGRLDPSATP-------ELPLIQPLVELQMRWSAL-PTPETLLAETLHSREG-WHLFLYP 646 Query: 704 PYGRRVHEPWAVAIAGRIHALWGADASVVASDDG--IVARIP-DTDGKLPDAAIFLFEPE 760 GR VH +A R+ A SV +D G ++A P D LP + E Sbjct: 647 FAGRSVHLGLGSLLAWRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPR----VLAEE 702 Query: 761 KLLQIVREAVGS---SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQG 817 + + + +GS L RFRE A A L+ PG Q + +S E+ + Sbjct: 703 RHRDLAADVLGSLNAGELSLRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRK 762 Query: 818 Y-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVA 876 Y P ++ + RE L D L + RL + + PSP A L+ ++ Sbjct: 763 YDPGNLLLGQAEREVLMQELDAHRLATTLARLASMRLDLH--VLERPSPLAFPLIVEFLR 820 Query: 877 EFMYQSDAPLAERRASVLS 895 E + S LA+R A +L+ Sbjct: 821 EKL--STEKLADRIARMLA 837 >UniRef50_A3DN94 DEAD/DEAH box helicase domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DN94_STAMF Length = 934 Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 182/688 (26%), Positives = 310/688 (45%), Gaps = 109/688 (15%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVI-APTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +K+ T++Q + + + +++++I APTGSGKT AA L + ++ H K Sbjct: 12 GYKKLTSLQIKAFKAIYKEKNSVIIVAPTGSGKTEAALLPIMYKI---------NKHGYK 62 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+P++AL D++R ++ K + + +R GDTP + R + Sbjct: 63 PISAIYITPLRALNRDIKRRMEKLAKCFG------------VSINLRHGDTPYKLRKYIE 110 Query: 145 RNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 NPP IL+TTPE+ Y+++ + R+ + ++ ++IDE + SKRG L S+ L+ Sbjct: 111 TNPPHILVTTPETFNYILINDKMRKYIANLKYIVIDEFRDLIESKRGILLLTSIYLLEHY 170 Query: 204 LHTSAQRIGLSAT---VRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP-VANMDDVS 259 L +I L+AT +R A ++ + + V+ ++ +++VVP + D+ Sbjct: 171 LKHKFIKIALTATLKNIRLAMEILSSSALPSNIDVLIDNTLKPIDVKVVVPECKDNDNKC 230 Query: 260 SVASGTGEDSH-AGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 S ED R I+ D RS +VF N+R +AEKL L + Sbjct: 231 KFLSSILEDKDLIARILRIY--------DLFRSKRSILVFVNTRSIAEKLGYLLKVV--- 279 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + + + H E HHGS+S+ R E+ ++G L+ Sbjct: 280 ----NEKLGANNIHVE-------------------VHHGSLSRNHRLKVEEDFRNGRLKG 316 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG-LFFPRTRRDLV 437 ++ATSS+ELGID+G +D VIQ +P V +QRIGR+GH++ G+S+G + ++ Sbjct: 317 LIATSSMELGIDVGFIDYVIQYMSPRQVVRLVQRIGRSGHKLSGISRGEIIVQNNTLQIL 376 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLP 496 +S VI G +E P PLDVLA V + + + + + + YS + ++DL Sbjct: 377 ESLVIARRAINGDIEEERIPVKPLDVLAYSIVLYSLITEGINIYDLYSLLIMNPIYRDLD 436 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL-TARPGAQLLAVTSGGTIPDRGMY 555 + F+ ++ L +L+ +E I T+R + T + D + Sbjct: 437 VKEFNDLIEYLK-----------YARLIKVKENIIKPTSRSRLFIYKTTMIPSTKDVIII 485 Query: 556 SVLLPEGEEKAGSRRVGELDEE-MVYESRVNDIITLGATSWRIQQITRDQ----VIVTPA 610 +V+ RR+G L+EE +V D++ +G W++ I DQ + V P Sbjct: 486 NVV--------DDRRIGVLNEEYVVLNISEGDVVVVGGKPWKV--IGYDQQNAKLYVEPY 535 Query: 611 P-GRSARLPFWRGEGNGRPAELGEMIGDFLH--------------LLADGAFFSGTIPPW 655 + +P W GE +L +G + LL D G Sbjct: 536 NVSENIIIPHWEGENIPVEYKLAREVGSLIRRISLNMKIDDYKTLLLNDNIKLEGI--ND 593 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSR 683 LA++ TI I+G IE I GSR Sbjct: 594 LADDKTII-IEGNIELGLVIVNINGGSR 620 >UniRef50_Q9Y9V1 Putative ATP-dependent helicase n=1 Tax=Aeropyrum pernix RepID=Q9Y9V1_AERPE Length = 948 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 186/620 (30%), Positives = 279/620 (45%), Gaps = 118/620 (19%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL-----DRLFREGGEDTREAH 81 +K +Q + + + R +ALV+APTGSGKT AA L R+ GG Sbjct: 19 YKSLLPIQEKAFPIIYRGLNALVVAPTGSGKTEAALAPLLARLRNGRVASGGG------- 71 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 +++Y++P++AL D++ ++ L G+ V +R GDT R Sbjct: 72 ----VKVVYVTPLRALNRDLEGRVE-RLAGL-----------FGYTVQVRHGDTVQSSRR 115 Query: 142 KLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 + PPDI+ITTPESL L+LT RA+E L+ V++DE+H + SKRG L+L+LE+L Sbjct: 116 RFLERPPDIVITTPESLALLLTVKRAKEVLKQARAVVVDEIHELMESKRGVELSLNLEKL 175 Query: 201 DALLHTSAQRIGLSATV--RSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 + + QRIGLSATV S A+ LG R V++V + + +R+VV Sbjct: 176 ELMAGRRLQRIGLSATVSRHSLYRAASLLGAGRHVSMVLDTSPKEYDVRVVV-------- 227 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVL-RHRSTIVFTNSRGLAEKLTARLNELYA 317 G EG W I + V S ++F N+R E L A Sbjct: 228 ------------VGDEGRFWENSVKAIAELVKGEGGSVLIFANTRSTVETL--------A 267 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 L R V A HHGS+S+ R E+ K G ++ Sbjct: 268 FALSRELGEEVPA------------------------HHGSLSRHVRERVERDFKEGRVK 303 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP-RTRRDL 436 +VATSSLELGID+G V LV+Q +P V + +QR GR+GH+ G S+ + ++ Sbjct: 304 AIVATSSLELGIDVGRVALVVQFLSPRQVTAMVQRAGRSGHRFGERSRAVIVTIDNVFEV 363 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL--QVDEWYSRVRRAAPWKD 494 ++S VI G LE+++ P P D LA +A AA+D+ ++ Y AP++D Sbjct: 364 LESHVIAFRAMKGDLEDISIPKKPYDALA-HFMAGAAIDSEPPTLEGVYKLAVSTAPYED 422 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFR--PKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 L + +LS D R P R ++R + V+ IPD Sbjct: 423 LKMEEVEEIARVLS------DVRVIRLGPGGKLGR-----SSRTYSYFYRVS---MIPDE 468 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVY-------ESRVNDIITLGATSWRIQQITRD-- 603 + V + R VGE+ E + + R I LG W+I ++ D Sbjct: 469 KTFKV-----HDVVSGRDVGEVGERFIQLRLMKASDPRSKPYIVLGGKVWKILEVDIDAG 523 Query: 604 QVIVTPAPGRSARLPFWRGE 623 +V+V+P +P W GE Sbjct: 524 KVLVSPEGEVEGAIPAWEGE 543 >UniRef50_C5CN99 DEAD/H associated domain protein n=9 Tax=Proteobacteria RepID=C5CN99_VARPS Length = 952 Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 227/821 (27%), Positives = 341/821 (41%), Gaps = 89/821 (10%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 V A WF +P Q W A L+ A TG+GKT A +L AL Sbjct: 81 VVKAALDAWFAARGWKPFKFQRDVWKAVAAGRSGLLHATTGAGKTYAVWLGALQAFSSAA 140 Query: 74 GEDTREAHKRKTS--RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 +R A +L+I+P++AL D R LQ PL+ + + G G R Sbjct: 141 PPPSRSARATPPPPLTVLWITPMRALAADTLRALQQPLEAMDAQ----GIDLHRWSAGAR 196 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRG 190 +GDT + ERS P +L+TTPESL L+L + A E L V V++DE H + G+KRG Sbjct: 197 SGDTSSAERSAQNERLPTVLVTTPESLSLLLARADASEVLGRVRMVVVDEWHELLGNKRG 256 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + L+L RL + G+SAT+ + + L GD+ +V V Sbjct: 257 VQVQLALARLRR-WNAGLAVWGMSATLGNLQEAMHALLGDQEGVLVQG----------AV 305 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + D S+ G E G G + + +LDE+ +T+VFTN+R +E Sbjct: 306 PKKLVVD--SLLPGRAERFPWG--GHLGLTMLPQVLDEIAASSTTLVFTNTRSQSEI--- 358 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 Y A L+ P A + HHGS+ + R E Sbjct: 359 ----WYQAMLEARPEWA----------------------GLIALHHGSLDRAVREWVELG 392 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+GEL+ VV TSSL+LG+D V+ V+Q+ +P VA LQR GR+GH G S+ P Sbjct: 393 LKNGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRITLVP 452 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 ++V+ A + AG +E P PLDVL Q V A D+ Y+ VR A Sbjct: 453 THSIEMVEGAAARAAIAAGHIEARHTPVQPLDVLVQHLVTVALGGGFVPDDLYAEVRGTA 512 Query: 491 PWKDLPRRVFDATLDMLSGRYPS-GDFSAFRPKL-----VWNRETGILTARPGAQLLAVT 544 + DL R + L +S PS + +R + VW L R + + Sbjct: 513 AYADLSRESWAWCLAFVSQGGPSLAAYPDYRRAVPDAEGVWRVPDARLARRHRMNIGTIV 572 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 S ++ + M G R+G ++E V + D G + +I Sbjct: 573 SDASMAVQYM------------GGARIGSVEEGFVARMKPGDCFLFGGRLLELVRIHDMT 620 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 V A G+ A +P W G L + + L L G + S + Sbjct: 621 AWVRRATGKRAAVPRWNGGRMPLSTTLADAVVQQLALAGAGRYNS----------PELQC 670 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 ++ L+E Q+ + + P L+ E G + L+ GR VH A +A R+ Sbjct: 671 VRPLLEIQQQWSAL-PTPETLLAETLATREGS-HLFLYPFAGRHVHMGLASLLAWRVAQH 728 Query: 725 WGADASVVASDDG--IVARIP-DTDGKLPDAAIFLFEPE----KLLQIVREAVGSSALFA 777 S+ +D G +++ P D LP + L + E LL V ++ + L Sbjct: 729 EARTFSIAVNDYGFELLSATPVDWPALLPQ-VLRLPQGEDAHATLLHEVLASLNAGELAQ 787 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 RFRE A + L+ PG + Q + +S E+ + Y Sbjct: 788 RRFREIARVSGLIFQGYPGEKRSSRQLQASSSLFWEVFRKY 828 >UniRef50_B8D5X5 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5X5_DESK1 Length = 932 Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 177/616 (28%), Positives = 280/616 (45%), Gaps = 102/616 (16%) Query: 26 AFKQPTAVQPQTW-HVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +K T +Q + + VA L++APTGSGKT AA + R+ E + K Sbjct: 12 GYKSFTELQKKAFDKVAGEGRSVLILAPTGSGKTEAAVIPVFYRVRIE---------RLK 62 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+P++AL D++R + K IA + L V +R GDTP + R +L Sbjct: 63 PIAAIYITPLRALNRDIERRI----KKIA--------SCFGLSVAVRHGDTPERARRELA 110 Query: 145 RNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 NPP +LITTPES Y+++ + R + +IIDE H + SKRG L L Sbjct: 111 DNPPHVLITTPESFAYIIVNEKLRHYIANTRYLIIDEFHEMVRSKRGLLFLTMLYLLGEY 170 Query: 204 LHTSAQRIGLSATVRSASDVAAFL---GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 RI LSAT+ + S+ L G D V V+ ++ +++V+P S Sbjct: 171 HGFKPLRIALSATLSNPSEYLKLLTPTGED--VEVIGDEYVKKMDVKVVIP-----GKPS 223 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 S G+D S+ P + + ILD R+ +VFTN+R LAE L + L +L Sbjct: 224 SLSLLGDD-------SVDPRL-SYILDAGRRYNGVLVFTNTRSLAEMLGSLLRKL----- 270 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 ++ + G HHGS+S+ R E K GEL +V Sbjct: 271 -------IEKHGLDLKVGV---------------HHGSLSRSHREEVEAGFKQGELNILV 308 Query: 381 ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR-RDLVDS 439 ATSS+ELGID+G +D VIQ +P + +QRIGR+GH++ G+S+G+ + L++S Sbjct: 309 ATSSMELGIDIGHIDFVIQYLSPRQSSRLIQRIGRSGHRLKGISRGVVLSTSNLLHLLES 368 Query: 440 AVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD--ALQVDEWYSRVRRAAPWKDLPR 497 ++V+ ++E PLDVLA ++ + DE Y R+ R A ++DL Sbjct: 369 LILVDEALRSKVEREEVVFKPLDVLAYAIALLVLLNPSGVNRDELYDRLVRYALYRDLSP 428 Query: 498 RVFDATLDMLSG----RYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 ++ ++ + R G R ++ T ++ + ++ V++G TI Sbjct: 429 EEYNGLIEYMVYAHVLRDDGGLLKPTRKTRLYVYRTSMIPSTRDIHVVEVSTGKTI---- 484 Query: 554 MYSVLLPEGEEKAGSRRVGELDEE-MVYESRVNDIITLGATSWRIQQIT--RDQVIVTPA 610 G L+EE ++ R +D+I L +WR+ + + V Sbjct: 485 ------------------GSLNEEYVILRLRPDDVIILAGEAWRVIGFDDEKGHLYVEKT 526 Query: 611 PGRSAR--LPFWRGEG 624 G A +P W GE Sbjct: 527 KGDYAESLIPHWEGEN 542 >UniRef50_C6Y055 DEAD/H associated domain protein n=7 Tax=Bacteroidetes RepID=C6Y055_PEDHD Length = 840 Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 217/874 (24%), Positives = 364/874 (41%), Gaps = 114/874 (13%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA-LDRLFREGGEDTREA 80 W K+P Q W A LV APTG GKT + FL A +D L G + R+A Sbjct: 15 WLKSNRKKPFKFQTDAWQYYAEGYSGLVNAPTGFGKTFSIFLAAVIDELNTRAGLEKRQA 74 Query: 81 HKR----KTS--RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 K+ +TS ++++I+P+++L D+ R + R E E++ +G+R GD Sbjct: 75 KKKAMVKRTSGLKLMWITPLRSLAKDLARAM----------REVCMELELDWHIGVRNGD 124 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARET-LRGVETVIIDEVHAVAGSKRGAHL 193 TP E+ K + P++LI TPES++L+L + + ++ ++ DE H + GSKRG Sbjct: 125 TPQNEKLKQKKAMPEVLIITPESIHLLLAQKNTHSYFDQLQCIVADEWHELLGSKRGVMT 184 Query: 194 ALSLERLDALLHT-SAQRI----GLSATVRSASDVAAFL--GGDRPVTVVNPPAMRHPQI 246 L + R+ LL +R+ G+SAT+ + L D P T+V + I Sbjct: 185 ELGISRIKGLLKERHPERLLRIWGISATIGNMEQAMEVLVPYPDVPKTIVKADLEKKIDI 244 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 R ++P D + G H E +L + + ++T++FTN+RG AE Sbjct: 245 RSILP-----DHIDLLPWAGHLGHKLAE---------KLLPIIYKSKTTLIFTNTRGQAE 290 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L +A+D E+ +G + HHGS+ E R Sbjct: 291 -------------LWYQTLLALD----ENLAG------------LLAIHHGSIDYELRNW 321 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E AL SG L+ V++TSSL+LG+D VD V+Q+ +P VA LQR GR+GH S Sbjct: 322 IEDALHSGSLKAVISTSSLDLGVDFKPVDTVVQIGSPKGVARFLQRAGRSGHSPYETSTI 381 Query: 427 LFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 F P +LV++A I E +E+ P D L Q V A D + V Sbjct: 382 YFLPTHALELVEAAAIKEAAKTQDIESREPVVMAFDTLIQYLVTLAVGDGFDEARLFFEV 441 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGD----FSAF-RPKLV---WNRETGILTARPGA 538 + + +L + + + ++ GD ++ F + LV W E+ R Sbjct: 442 KETYAFSELLPQEWSWIMQFIT---TGGDSLTAYNEFSKVSLVDGLWKVESRQTAMRHRL 498 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ 598 + GTI M V G +G ++E + + TL Sbjct: 499 HI------GTIVSDPMLKVKFITG------GYIGMIEESFIARMKPGSSFTLAGRVLEFI 546 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAE 658 + V+V + + A P W G GR + L +G L + + + Sbjct: 547 MVKEMTVVVRKSKVKRAITPSWMG---GRIS-LTANLGAILRKKYNETLYKT------HQ 596 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY-GRRVHEPWAVAI 717 + + I L ++Q + VP ++E + D + P+ GR+VHE A I Sbjct: 597 DIELDFIFPLFQKQEKVSH-VPRDDEFLIELIATK--DGHHLFAYPFEGRQVHEIMAALI 653 Query: 718 AGRIHALWGADASVVASDDGIVAR----IPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 A R+ S+ +D G IP + + + LF P+ L + + ++ ++ Sbjct: 654 AYRLGKTTPISFSIAMNDYGFELLSEQPIPVEENDIKN----LFSPKNLAEDIVASINAT 709 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVIL-ETLRECL 832 + +FR+ A + L+ PG + A+ + Y ++L + E Sbjct: 710 EMARRKFRDIACISGLVFQGFPGKYIANKHLQSSAALFFNVFSDYDHHNLLLRQAYDEAF 769 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPF 866 + P L ++R+ ++ ++ + TP F Sbjct: 770 YQQIEEPRLAAALQRIQNSKLIVTKPESYTPLCF 803 >UniRef50_A2BLG2 ATP dependent helicase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLG2_HYPBU Length = 959 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 190/687 (27%), Positives = 303/687 (44%), Gaps = 105/687 (15%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 LR +++ T +Q + + ++APTG GKT AA L L R+ E E Sbjct: 31 LRGWRELTEIQEKAIKPILEGHNVFIVAPTGYGKTEAALLPILSRMLEERVEPVA----- 85 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 +LYI+P++AL D+ ER + V + GD P ER++ Sbjct: 86 ----LLYITPLRALINDIY------------ERISWWASRFGFIVARKHGDVPHSERTRR 129 Query: 144 TRNPPDILITTPESLYLML--TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 R+ P IL+TTPESL + L + R+ R + VI+DEVH + +KRG LA+ LER Sbjct: 130 LRHAPHILVTTPESLEIDLDWAPKFRQYYRNLRWVIVDEVHEIVSNKRGVQLAVLLERFR 189 Query: 202 ALLHTSAQRIGLSATVRSASDVA-AFLGGD-RPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 + Q I +SAT+ + A AF G RP+TVV+ R P I IVV D V Sbjct: 190 RIA-GDFQLIMISATIGEPTIAARAFTGSSRRPLTVVSVEK-RKP-IEIVV-----DYVE 241 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS--TIVFTNSRGLAEKLTARLNELYA 317 + ++ W +++++H T+VF NS+ AEKL + Sbjct: 242 APST------------KFW----RAAAEKLVKHMEPLTLVFVNSKHAAEKLHGEI----- 280 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 R+ V + HH S+ E+R E+ K G+L Sbjct: 281 ------------------------ERMGVEGVVV---HHASIHGEERRRIEKMAKEGKLN 313 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLV 437 ++AT +LELGID+G++ VI SV+S LQR+GR+GH + G G+ +L+ Sbjct: 314 MIIATKTLELGIDIGSIRKVILFRPAGSVSSLLQRLGRSGHTIAGKISGIVLATDPLELL 373 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 ++ G++E P PLD++A+ + A V++ Y + + ++ L R Sbjct: 374 EAIAEARLAAKGKVEVPELPVKPLDMVARAILGMALSGEYTVNDMYDILSKVYYFRGLTR 433 Query: 498 RVFDATLDMLSG----RYPSGDFSAFRPKL--VWNRETGILTARPGAQLLAVTSGGTIPD 551 FD +D L + + + P+ +W + G Q + TI + Sbjct: 434 SEFDELIDYLKNAKMIKINNDGKVSCGPQFYKIWRFDAGDSKYSWWVQNFS-QFFTTIGE 492 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRD--QVIVT 608 R Y+V +G R VGELD + V + RV +I LG +W++ I +V+V Sbjct: 493 RRAYTVRTVDG------RVVGELDTDFVVKVLRVGHVIRLGGRNWQVIGIDEHNGKVVVA 546 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEM-IGDFLHLLADGAFFSGTIPPWLA-EENTIANIQ 666 +PFW+G+G EL + I + ++ + IP + E+ A + Sbjct: 547 ETEQSITAIPFWKGKG----PELSRLVIAELEKVIQETHRGQLNIPSSVKLTESAAAVLN 602 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDE 693 G+I E R P +++E+ DE Sbjct: 603 GIIGEVRKYRYPAPARNKVIVEKLADE 629 >UniRef50_Q2SGL4 Lhr-like helicase n=5 Tax=Bacteria RepID=Q2SGL4_HAHCH Length = 699 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 190/669 (28%), Positives = 283/669 (42%), Gaps = 136/669 (20%) Query: 13 DVFSPATRDWFLRAFKQPTA--VQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D PA + + + P +Q T EHA+++APT GKT AA R+ Sbjct: 5 DRLHPAIQHHIVNSLGWPGLRPLQEATIEPVLNGEHAILLAPTAGGKTEAASFPIFSRML 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 E + +LYI PIKAL +++ ER + RVG+ Sbjct: 65 TENWQGLS---------VLYICPIKALLNNLE------------ERLSYYGHLLGRRVGV 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGS 187 GD ++K+ +PPD+L+TTPES+ +ML S R G+ VIIDE HA AG Sbjct: 104 WHGDISTSVKNKILADPPDLLLTTPESIEVMLVSNRMDHRHLFEGLRAVIIDEAHAFAGD 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV--TVVNPPAMRHPQ 245 RG HL LERL L QR+GLSATV + + +L G P +V+NPPA P Sbjct: 164 DRGWHLLAVLERLSYLTGRELQRLGLSATVGNPETLCDWLAGSCPSPRSVINPPA---PN 220 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 VVP +D V SV R ++ ++ + R +VF +SR Sbjct: 221 --TVVPEIQVDWVGSV-----------RNAAV-------VISRLHRGEKRLVFVDSRSRV 260 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E+L L L S +++ H +S ++R Sbjct: 261 EELAVELRNL------------------------------SVTTYVS---HSCLSLDERR 287 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 + E+A G +VATS+LELGID+G +D VIQ+ P +V+S LQRIGR G + G Sbjct: 288 MAEEAFAQGSDCVIVATSTLELGIDVGNLDRVIQIDAPFTVSSFLQRIGRTGRRAGSSRN 347 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 LF + + + ++ AG +E + PP PL + QQ +A + Sbjct: 348 CLFLATKQDAFLRAIALLRLWEAGYVEPIEPPPLPLHIYCQQVMALVLQE---------- 397 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF----RPKLV-WNRETGILTARPGAQL 540 + + +A L GR P F+ F R LV + E IL + G Sbjct: 398 -----------KGIAEADLSKWIGRMPG--FTQFSVSDRSSLVSYMLERSILHSDSGIIG 444 Query: 541 LAVTSGGTIPDRG---MYSVLL--PEGEEKAGSRRVGELDEEMVYESRVND--IITLGAT 593 + + + ++SV P + G + +GE+ ++ + ++ + +TLG Sbjct: 445 IGDSGERIFGQKNFLELFSVFTSPPMVKVFNGKQELGEV-HQLTFATKEDGPACLTLGGK 503 Query: 594 SWRIQQI--TRDQVIVTPA--PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS 649 SW + I R + V P GRS L G+P + EM +LA S Sbjct: 504 SWVTKYIDWARKKAFVEPTDIKGRSQWLSM------GQPLQF-EMCQSIQRVLA-----S 551 Query: 650 GTIPPWLAE 658 I PWL+ Sbjct: 552 DDIDPWLSN 560 >UniRef50_D1TEQ3 Lhr-like helicase-like protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TEQ3_9BURK Length = 738 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 154/489 (31%), Positives = 222/489 (45%), Gaps = 56/489 (11%) Query: 22 WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 WF QP Q + W A ++ A TG+GKT A + AL F R+ Sbjct: 74 WFASRHWQPFEFQREVWRNIAAGASGVLHASTGAGKTWAVWFGALT-AFASAASTPRKHP 132 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERS 141 + T +L+I+P++AL D R LQ E V VG+RTGDT A ER Sbjct: 133 EPLT--VLWITPMRALAADTARALQSSA----------AELAVPWSVGLRTGDTSAAERE 180 Query: 142 KLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 + R P L+TTPESL L+LT + ARE L V VI+DE H + G+KRG L+L RL Sbjct: 181 RQNRRMPSALVTTPESLTLILTRADAREVLSQVRLVIVDEWHELLGNKRGTQTQLALARL 240 Query: 201 DALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 Q GLSAT+ + S L + P A + +P A + V + Sbjct: 241 -THWRAGLQVWGLSATLGNLSFATEVL--------LAPVATPRVSVHGALPKALI--VDT 289 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 + T E G G + + + R+++VFTN+R E L AR Sbjct: 290 IIPDTIERFPWG--GHMGMRQVDAVARAIDEARTSLVFTNTRSQCEVW---YQALLDARP 344 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 + + IA+ HHGS+ ++ R E+ LK+G L+ VV Sbjct: 345 EWAGVIAL--------------------------HHGSLDQQVREWVERGLKNGLLKVVV 378 Query: 381 ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSA 440 TSSL+LG+D V+ V Q+ +P VA +QR GR+GH G S+ P +L+++A Sbjct: 379 CTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGLPSRVTIVPTHALELIEAA 438 Query: 441 VIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF 500 E + ++E+ PH P DVL Q V A E Y + ++DL ++ F Sbjct: 439 AAREAVDKRQIESRDTPHKPFDVLVQHLVTVAIGGGFDARELYDELLHTYAYRDLTQQEF 498 Query: 501 DATLDMLSG 509 D L+ + G Sbjct: 499 DWALNFVEG 507 >UniRef50_B8JFR7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=B8JFR7_ANAD2 Length = 701 Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 166/602 (27%), Positives = 253/602 (42%), Gaps = 106/602 (17%) Query: 32 AVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI 91 AVQ ++A+V+APT GKT A+ AL L G E ++Y+ Sbjct: 26 AVQELAGEAILDGKNAVVLAPTAGGKTEASIFPALANLVENGCEGVG---------VVYV 76 Query: 92 SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDIL 151 +PIKAL + + L G E V LR + GD P +++ + R P ++L Sbjct: 77 APIKALLNNQEERL-----GTYTEM-------VGLRRFVWHGDVPDRDKREFVREPAELL 124 Query: 152 ITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSA 208 +TTPESL +ML S T + + VI+DEVHA AG++RGAHL LERL Sbjct: 125 MTTPESLEVMLLSPRFPTPKVFPDLRMVIVDEVHAFAGTERGAHLMSVLERLIKSTKNDV 184 Query: 209 QRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTG 266 QRIGLSATV + ++ +L G R VV+PP + R + V+ + V +A Sbjct: 185 QRIGLSATVGNPEEILGWLQGTSRRAGVVVDPPKV---SARRELHVSLHESVIDIARDAA 241 Query: 267 EDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSI 326 + + ++ F SR L E + R+ Sbjct: 242 RRAAGNK---------------------SLFFCQSRALTESVAERM-------------- 266 Query: 327 AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 R ++VF+ HHGSVS+E+R E G C+V TS+LE Sbjct: 267 ----------------RGHGTEVFV---HHGSVSREERHDAEAQFNHGTNACIVCTSTLE 307 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM 446 LGID+G +DLV+Q P +V+S LQR+GR G + G + FF + + +VE Sbjct: 308 LGIDVGDLDLVMQANAPSTVSSFLQRMGRTGRRAGQTANTSFFCEDEDAALQAVALVELA 367 Query: 447 FAGRLENLTPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 G +E + V A Q A A+ + + + + D+ R F+ LD Sbjct: 368 REGWVERVPAARRCWPVFAHQIFALTLQYGAVSPERCWEHLHVVRDFADISRDEFERVLD 427 Query: 506 MLSGR---YPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEG 562 + + SG + K + R +L AV S +Y V Sbjct: 428 HMKRHEYLFESGGLLSLGQK-----AERVYGKRNFLELYAVFSSPV-----LYQV----- 472 Query: 563 EEKAGSRRVGELDEEMVYESRVNDI--ITLGATSWRIQQITRDQVIVTPAPGRSARLPFW 620 E A R +G L++ V + V ++ L +W ++ + + +V + P W Sbjct: 473 -ETAAGRALGSLEQNFV-DQLVEEMSAFLLAGRAWLVEHVHHEDRVVRVREAPRGQKPSW 530 Query: 621 RG 622 G Sbjct: 531 GG 532 >UniRef50_A4BLZ4 Lhr-like helicase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLZ4_9GAMM Length = 694 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 184/608 (30%), Positives = 266/608 (43%), Gaps = 118/608 (19%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 HAL+IAPT GKT AA L L R+ E + + +LYI PIKAL N Sbjct: 47 HHALLIAPTAGGKTEAAMLPVLSRMLSE---------EWRGLSVLYICPIKAL----LNN 93 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 L+ L +A R G T V + GD E+++ R PPDIL+TTPESL +L Sbjct: 94 LEARLSRLA---RLLGRT-----VQLWHGDIGQGEKNRAQREPPDILLTTPESLEGILIG 145 Query: 165 RARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 R+ LR GV V+IDE+HA AG RG HL LER+ AL QRIGLSATV Sbjct: 146 GRRDHLRLLGGVRCVVIDELHAFAGDDRGWHLLALLERIHALRGHEPQRIGLSATVGEPH 205 Query: 222 D----VAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277 +AA G+R + +R+ VP +D A R +I Sbjct: 206 ALLNWLAAHCAGERSL------------VRVQVPPTEVDLCVDYAGSL-------RNAAI 246 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS 337 ++ + R +VF +SR E+L SIA+ Sbjct: 247 -------LISRLHRGEKRLVFCDSRSRVEEL----------------SIAL--------- 274 Query: 338 GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 R DVF++ H ++S + R EQA + +VATS+LELG+D+G +D V Sbjct: 275 -----RALGVDVFVS---HAALSVDTRRQAEQAFAERQNCVIVATSTLELGLDVGDLDRV 326 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 IQ+ P SVAS LQR+GR G + LF L++S I + +G +E + P Sbjct: 327 IQIDAPGSVASFLQRLGRTGRRADSRRNLLFIATRDAGLLESLAIAQLFESGFVEPVVGP 386 Query: 458 HNPLDVLAQQTVAAAAMDALQVDE--WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGD 515 P ++ QQ A +L+++E + + +RR + L DA D L + Sbjct: 387 PMPCHLVVQQLFAMLFQHSLELEERVFTTTLRRIPGFAGL----IDAHWDELREHLLARG 442 Query: 516 FSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK-----AGSRR 570 F L+ N G+L A L + RG+ + + + G++ Sbjct: 443 F------LIRN---GLLLA------LGPKAERAFLGRGLADLCVSFDSPQLFTAFHGNKL 487 Query: 571 VGELDE-EMVYESRVNDIITLGATSWRIQQI--TRDQVIVTPAPGRSARLPFWRGEGNGR 627 +G +D + + ++ LG SWR+ TRD+V V A + W GE G Sbjct: 488 LGHVDPLSLSWRRDGPTVLALGGRSWRVVSTDWTRDRVYVEAADEKGT--SRWLGESRGV 545 Query: 628 PAELGEMI 635 + E + Sbjct: 546 SRVIAEQV 553 >UniRef50_B2A401 DEAD/DEAH box helicase domain protein n=6 Tax=Firmicutes RepID=B2A401_NATTJ Length = 711 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 156/607 (25%), Positives = 270/607 (44%), Gaps = 101/607 (16%) Query: 31 TAVQPQTWHVAARSEHALVIAP-TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRIL 89 T VQ +T + + +V++ T SGKT A FL L ++ ++ +D + IL Sbjct: 25 TPVQDKTIPIVMNTNKDVVVSSGTASGKTEAVFLPILSQIEKDATKDLK---------IL 75 Query: 90 YISPIKALGTD-VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPP 148 YISP+KAL D +R +++ K R G D ++ +LT+NP Sbjct: 76 YISPLKALINDQFERIIKLCEKSYIPIHRWHG-------------DVNQNKKKQLTKNPA 122 Query: 149 DILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 IL TPES+ + +R E L +E +IIDE+HA ++RG HL L RL+ + Sbjct: 123 GILQITPESIESLFINRTNELNYILSDIEFIIIDELHAFLDNERGVHLRSLLSRLENYIK 182 Query: 206 TSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS 263 + LSAT+ + + ++ + + V +++ +N DD + S Sbjct: 183 EKPRYFALSATLNNFKLIKEWINYNDIKNVEIID---------------SNEDDKDLLLS 227 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS 323 D + I Y + L E+ ++ +++F NSR E+ T LN L Sbjct: 228 LMHFDKGKDYKKPIDLYQD---LRELTKNVHSLIFCNSRAEVEETTLYLNRL-------- 276 Query: 324 PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL-KSGELRCVVAT 382 +NR ++++++A HH S+ K++R E+ + S + VV T Sbjct: 277 -----------------ANREVNTELYLA--HHSSIDKKEREYVEKTMANSKSPKSVVTT 317 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SSLELGID+GA+D V+Q+ +V+S QR+GR+G ++G + T LV S + Sbjct: 318 SSLELGIDIGAIDYVVQIDDTHTVSSLKQRLGRSGRKLGTNQVLQVYSTTNDSLVQSLAV 377 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPWKDLPRRVFD 501 ++ + +E T PLD+L Q ++ + +++D ++ A + L + Sbjct: 378 IDLLLEKWIEPATEYPLPLDILFHQIISICHEANGVRLDPLIDNIKANAAFYKLKEEDIN 437 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG-TIPDRGMYSVLL- 559 ++ + DF + R A+L+ G + + Y+V + Sbjct: 438 HVINYM----IENDF--------------LQLIRNSAELIVGLEGERLLRGKEFYAVFMT 479 Query: 560 -PEGEEKAGSRRVGELDEE-MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 E E + G R++G +D+ MV E D I L W I+ I ++ I+ A + Sbjct: 480 QEEFEVREGIRKIGSIDKSLMVSEG---DNIILAGQLWTIKNIDIERDIIYVAKAVDGKP 536 Query: 618 PFWRGEG 624 P + G G Sbjct: 537 PKYSGGG 543 >UniRef50_A1TJ45 DEAD/H associated domain protein n=5 Tax=Comamonadaceae RepID=A1TJ45_ACIAC Length = 1014 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 209/770 (27%), Positives = 307/770 (39%), Gaps = 106/770 (13%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P SS P P W +P Q + W A+ L+ A TG+GKT A +L Sbjct: 2 PSSSSRAPRA-RPLAEAWIAARGWRPFPFQREVWRALAQGRSGLLHATTGAGKTYAVWLG 60 Query: 65 ALD--------RLFREGGEDT-----------REAHKRKTS-------RILYISPIKALG 98 AL R EGG R A R+ +L+++P++AL Sbjct: 61 ALQAFGTAGKARGKGEGGTSADLADALEAAAGRPADGRRHKAPPPEPLTVLWLTPMRALA 120 Query: 99 TDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL 158 D + L+ PL +A + G RTGDT + ER +R P +L+TTPESL Sbjct: 121 ADTLKALRTPLDELAATQ----PALARWTSGARTGDTGSAERGAQSRRLPTVLVTTPESL 176 Query: 159 YLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 L+L + ARE L V V+ DE H + G+KRG + L+L RL A + G+SAT+ Sbjct: 177 SLLLARADARELLSTVRLVVADEWHELLGNKRGVQVQLALARL-AGWNPRVCVWGMSATL 235 Query: 218 RSASDVAAFLGGDRPVTVVNPPAMRHPQI--RIVVPVANMDDVSSVASGTGEDSHAGREG 275 + + L + Q+ R+VV D S AG G Sbjct: 236 GNLPEARDALLAPLGAEGAGEGVLVQGQVDKRLVVDTLLPDHPERF-------SWAGHLG 288 Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES 335 + ++ E+ +T+VF N R AE Y A L P A + A Sbjct: 289 L---RMLPAVVRELESTTTTLVFVNVRSQAELW-------YKAILDARPDWAGELA---- 334 Query: 336 TSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVD 395 HHGS+ + R E LK G LR VV TSSL+LG+D V+ Sbjct: 335 ------------------IHHGSLDRGVREWVEAGLKEGRLRAVVCTSSLDLGVDFLPVE 376 Query: 396 LVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLT 455 V+Q+ + +A LQR GR+GH G S+ P +LV++A + AG +E Sbjct: 377 RVLQIGSAKGIARLLQRAGRSGHAPGRPSRITLVPTHSLELVEAAAARAAVQAGEVEMRA 436 Query: 456 PPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS-- 513 P P+DVL Q V A + + Y+ VRR ++DLPR V+ LD + PS Sbjct: 437 SPRRPVDVLVQHLVTVALGGGFEPEALYAEVRRTVAYRDLPRAVWQWCLDFVHRGGPSLA 496 Query: 514 --GDFSAFRP--KLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR 569 D+ P + +W + L R A + GTI +V + G Sbjct: 497 AYPDYQRVAPDEEGIWRMPSARLARRHRANI------GTIVSDASMAVQVLHGA------ 544 Query: 570 RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPA 629 R+G ++E + D + +I V A +P W G Sbjct: 545 RLGTMEESFLSRLSPGDCFVFAGQVLEMVKIEDMTAYVRRAARGRPTVPRWAGSRMPLST 604 Query: 630 ELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGI-VPGSRHLVLE 688 L + + L A G + S + ++ L+E Q+ + + PG+ L+ E Sbjct: 605 VLADFVVQQLAQAAAGRYGS----------PELRCVRPLLEVQQRWSALPTPGT--LLAE 652 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI 738 R G W + L+ GR H A A R S+ +D G+ Sbjct: 653 TLRTREG-WHLFLYPFAGRHAHIGLASLFAWRAAQGEAGTFSIAVNDYGL 701 >UniRef50_A4FJZ7 Putative ATP-dependent helicase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJZ7_SACEN Length = 764 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 146/476 (30%), Positives = 209/476 (43%), Gaps = 94/476 (19%) Query: 47 ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQ 106 AL++APT GKT AA L + E H +LY+ P+KAL +++ L Sbjct: 57 ALLLAPTAGGKTEAACFPLLSAM---------ETHAWSGVSVLYVCPLKALLNNLEHRLD 107 Query: 107 IPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA 166 + RVGI GD A R +L R+PPD+L+TTPESL ML S Sbjct: 108 TYTSWLGR------------RVGIWHGDVAAGARQRLLRDPPDVLLTTPESLEAMLVSTK 155 Query: 167 ---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDV 223 R G+ + +DEVH+ AG RG HL LERL + QR+GLSATV + ++ Sbjct: 156 VDHRTLFGGLRAIAVDEVHSFAGDDRGWHLLAVLERLMRVAGRPIQRVGLSATVGNPHEL 215 Query: 224 AAFLGGD----RPVTVVNP---------------PAMRHPQIRIVV-------PVANMDD 257 +L G RP VV P P + + I P M Sbjct: 216 LYWLQGSRRGARPGAVVAPGVLNGGHATPPGTTSPTLEQEKSSISTNATGNTGPTRMMSS 275 Query: 258 VSSVASGTGEDSHAGREGSI-WPYIET-----GILDEVLRHRSTIVFTNSRGLAEKLTAR 311 A+ + G I Y+ + ++ + R +VF +SR L E+L A Sbjct: 276 AEEAAATSNVVQRVPPPGDIELDYVGSVDNAATVIAALHRGEKRLVFCDSRQLVEELGAS 335 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L R + F++ H S+S ++R E+A Sbjct: 336 L------------------------------RSRGVTTFLS---HASLSLDERRRAEEAF 362 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 +V+TS+LELGID+G +D VIQ+ P +VAS LQR+GR+G + G LF Sbjct: 363 ADARDCVIVSTSTLELGIDVGDLDRVIQINAPTTVASFLQRLGRSGRRPGSTRNCLFLAL 422 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA-----AAAMDALQVDEW 482 + L+ SA ++E G +E +T P P ++AQQ +A A DAL +EW Sbjct: 423 RKDALLWSAALLELWGRGYVEPVTAPPEPRHIVAQQLLALCLQHNAVGDALWSEEW 478 >UniRef50_B8GFB2 DEAD/DEAH box helicase domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFB2_METPE Length = 716 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 177/607 (29%), Positives = 251/607 (41%), Gaps = 124/607 (20%) Query: 33 VQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYIS 92 +Q Q W A+ + LV+APT GKT AA + +DR+ REG LY+S Sbjct: 29 LQEQAWQAASGGDDLLVLAPTAGGKTEAAMIPVIDRILREG---------LAGIACLYLS 79 Query: 93 PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILI 152 P+KAL D +ER + V + GD P ER +PP IL+ Sbjct: 80 PLKALIND------------QEERITTLARPAGITVQMWHGDVPKGERR--WEDPPQILM 125 Query: 153 TTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRI 211 TPESL L+L E L + V+IDEVHA RG HL + L+RLD + QRI Sbjct: 126 ITPESLEVLLLDPVLSEDLAQLRAVVIDEVHAFVPDPRGVHLKVLLDRLDTITGGKVQRI 185 Query: 212 GLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHA 271 GLSATV + + +L G P + +R S+ S Sbjct: 186 GLSATVGNPESILGWLSG---------PGRQGQVVR-----------STGLPAEKRFSFI 225 Query: 272 GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA 331 RE I Y +L V+ R +VF SR AEK+ SI + Sbjct: 226 VREDPIERY---QLLTGVVAGRRALVFVKSRSEAEKVRR--------------SIGAEIP 268 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 H A HH +++ + R E+A C++ TS+LELGID+ Sbjct: 269 H-------------------AYVHHSALAPDLRRAAEEATTRPGPVCIICTSTLELGIDI 309 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRL 451 G +DL++QV P SV+S LQR+GR+G + G + F DL+ + ++E ++ Sbjct: 310 GDLDLIVQVGPPTSVSSFLQRLGRSGRR--GSPATMTFLLGPEDLLITLAVIEAAAVHQV 367 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 E L+PP P V+ QQ + R R++ L R +F LS Sbjct: 368 EPLSPPEKPYAVVLQQMLLYLIKSG--------RTSRSS----LSRHIF-PLFPFLSANP 414 Query: 512 PSGDFSAFRPKLVWNR-ETGILTARPGAQLLA----VTSGG--------TIPDRGMYSVL 558 + D +L+ N E GI+ G +L T GG + Y V+ Sbjct: 415 ETID------RLIDNLIELGIMATDGGLLMLGDAGETTFGGAGRKDLFSVLSSVSEYQVI 468 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ--VIVTPAPGRSAR 616 P+G+ R+G LD ++ D LG W + + VIVT A Sbjct: 469 TPDGD------RIGRLDGRSLH-LMPGDAFPLGGRLWSVAGCDQQHHLVIVTRASAGQCS 521 Query: 617 LP-FWRG 622 P FW G Sbjct: 522 TPIFWIG 528 >UniRef50_A2SRH6 DEAD/DEAH box helicase domain protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SRH6_METLZ Length = 710 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 190/709 (26%), Positives = 296/709 (41%), Gaps = 138/709 (19%) Query: 33 VQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYIS 92 VQ +T+ + LV+APT GKT +AF LD + ++ E +YIS Sbjct: 27 VQEETYLSVSSGADTLVLAPTAGGKTESAFFPVLDGILKDPSEHLSA---------IYIS 77 Query: 93 PIKALGTD-VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP-PDI 150 P+KAL D + R L + + L ++ GD ++R + DI Sbjct: 78 PLKALINDQLDRILFLCAR-------------TELSAAVQHGDVSDRDRFDFAGSEHADI 124 Query: 151 LITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQ 209 L+TTPESL ++L+ ++ + + V +IIDE+HA S RG HL ++RL+ L Sbjct: 125 LLTTPESLEVLLSDAKTKNAFKEVRYLIIDEIHAFMESDRGVHLRCLMDRLEFLGKKRMI 184 Query: 210 RIGLSATVRSASDVAAFLGG----DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT 265 RIGLSATV + + + G V++ +PP+ + Q VV Sbjct: 185 RIGLSATVGNPEALLDWFSGPNRKKHLVSIPSPPSKK--QFTFVV--------------- 227 Query: 266 GEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS 325 E G+ +I Y+ + ++FT SR LAEKL L E PS Sbjct: 228 -EPEFTGQVRAIAGYVSG---------KKALMFTESRSLAEKLVLPLRE-------ELPS 270 Query: 326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSL 385 + + HH SVS + R E + CV+ TS++ Sbjct: 271 VFL--------------------------HHSSVSPQDREAAELSFGQVGGTCVICTSTM 304 Query: 386 ELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC 445 ELG+D+G +DLV+Q P SV+S LQR+GR G + G +K +F DL+ + ++E Sbjct: 305 ELGVDIGELDLVVQYGPPRSVSSFLQRLGRTGRR-GSPAKMIFIVSNACDLLIAVSVIEA 363 Query: 446 MFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 +E+L P P VL QQ + + +R P+KD F A L Sbjct: 364 AMQHSVESLKAPSRPYHVLVQQLFLLLKGRTGMSIRSIIDSLRALTPFKDFSVAQFSAVL 423 Query: 505 DMLSGR---YPSGDF--SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 + L SGD + + ++ R + LA+ S I D G + +L Sbjct: 424 EYLVAENYLTCSGDLYIAGTKAEMELGR----------SNWLALIS--VIRDAGGFLAVL 471 Query: 560 PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD----QVIVTPAPGR-S 614 PEG VG LD V + +WR+ + RD +V++ PA + Sbjct: 472 PEGT------VVGTLDPRFV-AGDPGKTFSFTGKTWRL--LHRDDAHKRVLIEPAFAKGD 522 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP--PWLAEENTIANIQGLIEEQ 672 + PFW G G A L + A IP P E+ T+ ++ LI Sbjct: 523 VKRPFWSGGDGGSYAST-------LVCQSVAAVLGRGIPSLPLPLEQKTM--VEDLIRML 573 Query: 673 RNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + PG+ HL R E+ + +++ + G R ++ A + R+ Sbjct: 574 PD--DFSPGTIHL---RTEPELNGYSVVVSTFLGTRTNQTLAHLLKTRL 617 >UniRef50_A7IB28 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7IB28_METB6 Length = 698 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 164/593 (27%), Positives = 243/593 (40%), Gaps = 116/593 (19%) Query: 33 VQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYIS 92 VQ Q + LVIAPT GK+ AA + LD + + G LYI+ Sbjct: 9 VQEQAYAAIREGNDTLVIAPTAGGKSEAALIPVLDDILKTGAPGIS---------CLYIA 59 Query: 93 PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILI 152 P+KAL D +ER V+L + GD P +R + P L+ Sbjct: 60 PLKALIND------------QEERIAGFCRPVSLTLARWHGDVPKGDRGWKEDDAPQFLL 107 Query: 153 TTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRI 211 TPESL ++L A L V VI+DE+HA S+RG HL + L+RLD + +RI Sbjct: 108 ITPESLEVLLHEPVAASALSSVRYVIVDELHAFVESERGVHLRVLLDRLDRIATAPVRRI 167 Query: 212 GLSATVRSASDVAAFLGGDRP----VTVVNPPAMRHPQIRIVV---PVANMDDVSSVASG 264 GLSATV + +V A+ G R V+V PP+ + R VV P +D + + +G Sbjct: 168 GLSATVGNPDEVLAWFSGGRGRSKVVSVAAPPSQK--VFRFVVESDPGKRIDALVRLVAG 225 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 + +VF NSR AE + + Sbjct: 226 ----------------------------KKALVFVNSRSAAETVIREV------------ 245 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 S R+++ + HH S++ ++ E+A + C++ TS+ Sbjct: 246 ----------------SGRIENLHI-----HHSSIAPIKKKEAEEAFRGSGGACIICTST 284 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 LELGID+G +D+V+Q P SV+S LQR+GRAG + S L A I E Sbjct: 285 LELGIDIGDLDIVVQDGPPDSVSSFLQRMGRAGRRDRAASVAWILSDPGELLAGCATI-E 343 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAA-----AMDALQVDEWYSRVRRAAPWKDLPRRV 499 C + E L PP P +VL QQ A A V + S A + + R+ Sbjct: 344 CAQKKQTEPLEPPEKPWNVLVQQLFLALLSGPRAGRGTIVRQLRSFSVFAQCFAEEIDRL 403 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 D +++ Y S D P R G+ R +L +V +GG+ Y + Sbjct: 404 LD---HLITTGYLSADGDLLVPGPEAERAFGLSRVR---ELYSVIAGGS-----EYRAVT 452 Query: 560 PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 P+GE +G +D + D + LG W + + +V PG Sbjct: 453 PDGEV------IGAIDARFAHREEPGDFV-LGGAIWSVVKCDESHNLVVVVPG 498 >UniRef50_A4TAT7 DEAD/DEAH box helicase domain protein n=4 Tax=Actinomycetales RepID=A4TAT7_MYCGI Length = 696 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 177/583 (30%), Positives = 259/583 (44%), Gaps = 114/583 (19%) Query: 29 QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI 88 Q AV+P V A S+ A+V+APT GKT AA L R+ E + + Sbjct: 28 QAAAVEP----VLAGSD-AVVLAPTAGGKTEAAMFPLLSRMATEDWQGVS---------V 73 Query: 89 LYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPP 148 LY+ P++AL NLQ + G R G + + GD ++R K+ + P Sbjct: 74 LYVCPLRAL----LNNLQPRIDGYC---RWLGRS-----AAVWHGDVSQEQRQKILVDRP 121 Query: 149 DILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 D+L+TTPESL ML S R G++ V++DE+HA AG RG HL LERL + Sbjct: 122 DVLLTTPESLEAMLVSTKVDPRVLFSGLQAVVVDEIHAFAGDDRGWHLLAVLERLSRVAG 181 Query: 206 TSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVANMDDVSSV-- 261 QRIGLSATV + +D+ A+L G + V PA+ P P +D V S+ Sbjct: 182 RELQRIGLSATVGNPTDLLAWLQGSFHTRTSAVVAPAVETP----AAPDITVDYVGSLTN 237 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 A+ HAG + +VF +SR AE+L A L +L Sbjct: 238 AATVIASLHAGEK--------------------RLVFVDSRRQAEELGAALRDL------ 271 Query: 322 RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 + +I+ H S+S +R +E A +VA Sbjct: 272 ------------------------DIETYIS---HSSLSAAERRRSEAAFADARDTVIVA 304 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TS+LELGID+G +D VIQ+ + +VAS LQR+GR G + LF ++ ++ Sbjct: 305 TSTLELGIDVGDLDRVIQINSTRTVASFLQRLGRTGRRPSSSRNCLFLCLDDEAVLLASG 364 Query: 442 IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRRAAPWKDLPRRVF 500 +++ G +E +TPP +P + AQQ +A + V EW W DLP VF Sbjct: 365 MLQRWSQGWVEPVTPPPHPRHIAAQQLMALCLQQHRIGVAEWTQW------WGDLP--VF 416 Query: 501 DATL-DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA-VTSGGTIPDRGMYSVL 558 D T ++L G F+ P L E R G + + +T+ T P Sbjct: 417 DDTAPEILEYLVAEGYFATDGPFLHIGPEA---ERRFGRRYFSDLTAVFTAP-------- 465 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVND-IITLGATSWRIQQI 600 PE AG VG + +++ ES ++ LG SW++ I Sbjct: 466 -PEFIVLAGRVEVGTIGTDLLTESVEGPRLLLLGGRSWKVTHI 507 >UniRef50_A9F615 ATP-dependent helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F615_SORC5 Length = 713 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 138/457 (30%), Positives = 205/457 (44%), Gaps = 84/457 (18%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 ++ +V+APT GKT AAF L + +A + + ++Y+SPI+AL + Sbjct: 39 KNCVVLAPTAGGKTEAAFFPLLSAM---------DAADWRPTSVIYLSPIRALLNN---- 85 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 +ER R T + RV GDT R + DIL+TTPESL M+ S Sbjct: 86 --------QEERVTRFATTLGRRVAKWHGDTGQGARKAFLSDSTDILLTTPESLEAMMMS 137 Query: 165 R---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 A+ G+ VIIDEVHA AG RGAHLA LERL QRIGLSATV + Sbjct: 138 PRVPAKRVFAGLRAVIIDEVHAFAGDDRGAHLAALLERLSRFCGNDVQRIGLSATVGNPE 197 Query: 222 DVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 + A+L G RP TV++PP + V M++ +S+ HAG + Sbjct: 198 QILAWLQGRSRRPGTVISPPREASAPRLELDSVETMENAASIV----RRFHAGSK----- 248 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 +VF +SR E++ RL Sbjct: 249 ---------------RLVFVDSRRGVEEIGTRL--------------------------- 266 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 R DV++ HGS+S +R E+A +V+TS+LELGID+G +D VIQ Sbjct: 267 ---RRDGVDVYMV---HGSLSAPERRDAERAFAERTDCVIVSTSALELGIDIGDLDHVIQ 320 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHN 459 + +P +VAS LQR+GR G + G + F + +A ++ G +E++ Sbjct: 321 IDSPSTVASFLQRLGRTGRRAGAQANCTFLAVKPAAALQAAALMRLHRQGYVEDVRAERR 380 Query: 460 PLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDL 495 +LA Q +A + +W++ + A + D+ Sbjct: 381 AAHILAHQLLALCIEHGGIGRGDWFAWLDGATSFADI 417 >UniRef50_A1VV81 DEAD/DEAH box helicase domain protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VV81_POLNA Length = 675 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 165/607 (27%), Positives = 245/607 (40%), Gaps = 124/607 (20%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 H L++APT GKT AA + L R+ H ++Y+ PIKAL ++++ L Sbjct: 40 HCLLLAPTAGGKTEAAIIPVLSRML---------THAWPGVSVIYVCPIKALLNNLEQRL 90 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 + V RV + GD ++ ++ PDIL+TTPESL ML S Sbjct: 91 SHYAR------------LVGRRVAVWHGDVSQSKKGHALKDAPDILLTTPESLEGMLVST 138 Query: 166 --ARETLRG-VETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASD 222 R+ G + VI DE+HA A RG H+ L RL + QR+GLSATV + ++ Sbjct: 139 RIDRKVWFGNLRVVIADELHAFAADDRGWHMRAVLHRLQQYVPQEMQRLGLSATVSNPAE 198 Query: 223 VAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 282 + + P V S + T D GS+ Sbjct: 199 LLDWFA----------------------PTGIKQVVGSASVSTDADVTVDFVGSL--ANA 234 Query: 283 TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN 342 ++ + R +VF++SR AE+LT+ L Sbjct: 235 ATVIARLHRGSKRLVFSDSRSSAEQLTSML------------------------------ 264 Query: 343 RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT 402 R Q F++ H S+S +R + E A + +VATS+LELGID+G +D VIQ+ Sbjct: 265 RAQEVRTFLS---HASLSHSERKLAETAFAEEKDCVIVATSTLELGIDVGDLDHVIQIDA 321 Query: 403 PLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLD 462 P +V+S LQR+GR G + G LF L+ + I +E PP P Sbjct: 322 PATVSSFLQRMGRTGRREGARRSCLFLCTNDDSLMLAIGICRLWGEAWVEAAYPPPEPWA 381 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 ++AQQ + A L+ +W PRR A +L G +P RP Sbjct: 382 LVAQQAMVA----TLERAQW-------------PRRELIA---LLCGAFPESS----RPG 417 Query: 523 LVWNRETGILTARPGAQLLAVTSG----GTIPD----RGMYSVLLP--EGEE----KAGS 568 + T ++ + L T G G + R Y LL G + + GS Sbjct: 418 I-----TDVIDHMVASSYLMDTHGVLQIGPATEKQFGRAHYKDLLASFSGTQLLLGRCGS 472 Query: 569 RRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRP 628 VG +D M+ + +I L SWRI +I + V P + W G G Sbjct: 473 AEVGYIDPTMLAGDKPVRLILLAGKSWRITEIDWKRQTVWLEPAKEGGTARWNGSGRTLS 532 Query: 629 AELGEMI 635 E+ + I Sbjct: 533 REIAQGI 539 >UniRef50_Q24ZT1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZT1_DESHY Length = 720 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 147/491 (29%), Positives = 222/491 (45%), Gaps = 91/491 (18%) Query: 32 AVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI-- 88 AVQ + V SE H L+ A T SGKT AAFL + L H+ I Sbjct: 27 AVQVEACRVIFESESHLLLAAGTASGKTEAAFLPVITLL-----------HESPPLSISA 75 Query: 89 LYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPP 148 LYI P+KAL D L L+ E +L V GD ++K+ +NP Sbjct: 76 LYIGPLKALINDQFARLSDLLE------------EAHLPVWHWHGDVSPSHKNKMLKNPQ 123 Query: 149 DILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 IL TPESL ML +R+ + LR + ++IDEVHA G+ RG+ + LERL ++ Sbjct: 124 GILQITPESLESMLINRSTDILRLFADLRFIVIDEVHAFMGTDRGSQILCQLERLTRMIG 183 Query: 206 TSAQRIGLSATVRSASDVAAFLG-GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG 264 +RIGLSAT+ + +L G T+ + ++R+ V +D+ ++ Sbjct: 184 HQPRRIGLSATLGDYAIAEKWLSSGTEKRTITPKVQVGQQKVRLAVEHFYLDEEKKMS-- 241 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 + I D+ ++R ++FTN+R AE A L +L A +R P Sbjct: 242 ---------------LYDQYIFDQS-KNRKCLIFTNNREQAEYTVATLRQL--AEGKRMP 283 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA-TS 383 D H HHGS+S R E+A+K CV A T Sbjct: 284 ----DVYHV---------------------HHGSISAPLREAAEKAMKESPEPCVTAATI 318 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD-------- 435 +LELGID+G ++ +IQ+ TP SV+S +QR+GR+G + G S+ + + Sbjct: 319 TLELGIDLGYLERIIQLETPFSVSSFVQRLGRSGRR-GTPSEMWLVCKEDEEVNDLLPNQ 377 Query: 436 ----LVDSAVIVECMFAGR-LENLTPPHNPLDVLAQQTVAA-AAMDALQVDEWYSRVRRA 489 L+ + I++ R +E ++P H P +L QT++ AAM L RV Sbjct: 378 LPWSLLQAIAIIQLYLEERWIEPVSPKHYPFSLLYHQTMSTLAAMGELVPAALAQRVLTL 437 Query: 490 APWKDLPRRVF 500 +P+K++ F Sbjct: 438 SPFKNISSEDF 448 >UniRef50_O26412 ATP-dependent helicase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26412_METTH Length = 702 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 166/619 (26%), Positives = 252/619 (40%), Gaps = 116/619 (18%) Query: 33 VQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYIS 92 VQ R E L++APT SGKT AA + + + EG +LY+S Sbjct: 26 VQKSALEAIGRGEDTLIVAPTASGKTEAALIPVFNSILSEG---------LPPVSMLYVS 76 Query: 93 PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILI 152 P+KAL D+ L++ NL V GD PA + + +NP DIL+ Sbjct: 77 PLKALINDMHSRLEL------------WGNHFNLEVMKWHGDVPANRKRRFIKNPSDILL 124 Query: 153 TTPESLYLMLTSRAR----ETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSA 208 TPESL +M+ +R+R L + +I+DE+H + RG L L RL+ Sbjct: 125 ITPESLEVMMINRSRAEKERILGNLRYIIVDEIHQFIEADRGVQLNSLLARLERYTGVRP 184 Query: 209 QRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGED 268 QRIGLSATV + +V ++ VV A R Q RI E Sbjct: 185 QRIGLSATVGNPEEVLNWMSPSG--AVVRDTAERKLQYRIF-----------------EL 225 Query: 269 SHAGREGSIWPYIETGILDEVLRH---RSTIVFTNSRGLAEKLTARLNELYAARLQRSPS 325 +H L EVLR + ++F SR AEK Y +++ Sbjct: 226 NHHK-------------LIEVLRRFTGKKVLIFVPSRRDAEK--------YYNIIRKCLD 264 Query: 326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSL 385 + DVFI HH S++++ R E+ +S +V TS+L Sbjct: 265 V---------------------DVFI---HHSSINRDSREEAEERFRSVSAAFMVNTSTL 300 Query: 386 ELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC 445 ELGID+G +D+VI + +P SV LQR GR+G + G +F ++ + + + Sbjct: 301 ELGIDVGDIDVVIHIRSPTSVNRFLQRTGRSGRRRGLQRTIIF---QEKEALTALSVASL 357 Query: 446 MFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 +GRLE+L P PLD+ Q +++ ++ + Y + RA + DL Sbjct: 358 ALSGRLEDLRIPVRPLDIYFHQILSSVFELEKPTPGDIYRGLGRAHVFSDL--------- 408 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE- 563 + DF +V N + + G + Y+V P E Sbjct: 409 -------DADDFRHLVEFMVENDFLRVHGPYIHHGFNFEKTFGKMNFLEFYTVFPPNYEF 461 Query: 564 -EKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRDQVIVTPAPG-RSARLPFW 620 K ++ +G LD V +V LG W ++ I ++ IV P R A +P W Sbjct: 462 TVKHRTKVIGSLDSFFVVTYLKVGRGFILGGEKWVVKDIDHERFIVRVKPCTRDAEIPDW 521 Query: 621 RGEGNGRPAELGEMIGDFL 639 G E+ + D L Sbjct: 522 SSGGAPTTFEVARHVYDIL 540 >UniRef50_C5CE86 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CE86_KOSOT Length = 716 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 171/678 (25%), Positives = 281/678 (41%), Gaps = 128/678 (18%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 +K TA+Q + ++ L+IA T SGKT AA + L ++ + G K Sbjct: 18 WKSLTAIQKKAIPEIISGKNVLIIAGTASGKTEAAMIPILQKMSKNRG---------KGI 68 Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 +Y +P+KAL D+ + L KGI + + VG GD +Q Sbjct: 69 ICIYFAPLKALINDIAQRL----KGIFER--------FDFYVGKWHGDV-SQSDKIYALK 115 Query: 147 PPDILITTPESLYLMLTSR--ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 IL+TTPES+ +LTS+ + E + V+IDEVH A + RGA L +ERL + Sbjct: 116 EAKILVTTPESMEGLLTSKKFSPEIFSDLRFVVIDEVHNFANNPRGAQLMSLIERLQIIS 175 Query: 205 HTSAQRIGLSATVRSASDVAAFLGG--DRPVTVV--NPPAMRHPQIRIVVPVANMDDVSS 260 QR+ +SATV + + ++ G +R V+ N + R +R + D V + Sbjct: 176 RNEIQRVAMSATVGNPEKLLQWITGCSERESVVIETNSASRREINVRKEEEIELSDLVKN 235 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 + S ++ I+F +SR E T +L + Sbjct: 236 LLS---------------------------ENKKIIIFADSRKEVEHYTRKLLD------ 262 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 SG A HH SVSK R E+A K+ + CV+ Sbjct: 263 ----------------SGIE-----------ALPHHSSVSKTIRESIEKAFKANDKSCVI 295 Query: 381 -ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG-LFFPRTRRDLVD 438 ATS+LELGID+G VD VI + P S +S LQRIGR+G + +SK + PR DL+ Sbjct: 296 IATSTLELGIDVGNVDTVIFLNVPYSTSSFLQRIGRSGRK-SKISKAWILIPR-EEDLIR 353 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 I + G +E + P + A Q +A + E ++ A+P+K++ + Sbjct: 354 FLGIATMLQDGEVEKVRPLWYYPQLFAHQIIALTYEKQKLLIEHLKVLKNASPFKEIKKD 413 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 F+ D L ++ L N E ++ PG++ L + G + + VL Sbjct: 414 DFELLRDHLLNKH----------YLELNSENYLV---PGSETLEIMESGY--KKKNFVVL 458 Query: 559 LP---------EGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 P +G E + + ++ + +L +WR+++I + + Sbjct: 459 FPTTVDFIVYHKGVEIGTLHPIFAQTLQESFQKEGYAVFSLAKENWRVEKIDTRKRKIDV 518 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI-ANIQGL 668 P +++P W G+ + + I A S IP + TI + + L Sbjct: 519 VPTNESQIPKWMSFGSKMDFDFAQAIRK--------ALISQEIPKNVNVSETIKSELLDL 570 Query: 669 IEEQRNATGIVPGSRHLV 686 ++ ++N V R+LV Sbjct: 571 MDVEKNT---VATDRYLV 585 >UniRef50_C4FYH2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYH2_ABIDE Length = 721 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 155/633 (24%), Positives = 252/633 (39%), Gaps = 107/633 (16%) Query: 15 FSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIA-PTGSGKTLAAFLYALDRLFRE 72 +P +D+ R +++ +Q + ++H L+IA PT SGKT AAFL + +L+ + Sbjct: 7 LAPFVQDYIYRNGWEELREIQVAACDIIFNTDHNLLIATPTASGKTEAAFLPVITKLYNK 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 K+ +LYI+P+KAL D ++ L+ E + V Sbjct: 67 PS---------KSVGVLYIAPLKALINDQFSRIEELLE------------EAYIPVTKWH 105 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKR 189 GD +++L +NP IL TTPESL M+ R + ++ + +IIDEVH G +R Sbjct: 106 GDVSVNMKNRLLKNPSGILQTTPESLEAMIMKRKEQAVKLFSDLRYIIIDEVHNFIGEER 165 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G L LERL L +RIGLSAT+ +L G V P + +V Sbjct: 166 GTQLISLLERLSKLTGIVPRRIGLSATLGDIEGTEKWLSGGTGRLCVTPETGIKKRKAMV 225 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 + +D E + L + R + +I+F+NSR E+ Sbjct: 226 M-------AEHFYEFPLQDEKHKNENLFFES-----LYNLTRGKKSIIFSNSRAEVERNI 273 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 L ++ +++ DVF+ HHGS+S R E+ Sbjct: 274 VNLKDI-------------------------ASKKGEPDVFMV--HHGSISASDREYVEE 306 Query: 370 ALKSGELRCVV-ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 ++ + V AT +LELGID+G ++ ++QV P SVAS QR+GR+G + G Sbjct: 307 QMRLSNMPLVAGATVTLELGIDLGDLERIVQVGCPKSVASLSQRLGRSGRRSGVSEMCFL 366 Query: 429 FPRTRR------------DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA 476 F ++ V ++E R+E + P + P +L QT++ Sbjct: 367 FDEDKQSESSEFYKLVNWSFVKCIALIELYRENRIEPVLPENYPFGILYHQTMSYL---- 422 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSA--FRPKLVWNRETG-ILT 533 Y R P D L Y S +R L + +TG I Sbjct: 423 ------YGR-GEIKP---------DLLAQNLLSEYVFSHISKEDYRELLCFMLKTGQIEK 466 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYESRVNDIITLG 591 G ++ + + YSV + E + GS +G L M + + LG Sbjct: 467 TETGGLIIGLEGEKIVNHYDFYSVFESDVEYSVREGSHEIGTLTRLM----QPDTTFVLG 522 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 +W + + ++ + + W G G Sbjct: 523 GKTWLVTETDKENKTIYVEKAKGKPPTVWDGTG 555 >UniRef50_C7RIR1 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RIR1_9PROT Length = 711 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 126/429 (29%), Positives = 195/429 (45%), Gaps = 81/429 (18%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 +H +++APT GKT AA L R+ ED R +LY+ PI+AL +++ Sbjct: 43 QHCILLAPTAGGKTEAAIFPVLSRML---SEDWRGLS------VLYVCPIRALLNNLEPR 93 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 L G+ V RVG+ GD + + ++PPD+L+TTPESL ML S Sbjct: 94 LSCYF-GL-----------VGRRVGVWHGDISDSIKKRAIKDPPDLLLTTPESLEGMLIS 141 Query: 165 ---RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 R L GV +I+DE+HA G RG H+ ++R+ L Q +GL+ATV + Sbjct: 142 ANDDKRNLLLGVGLIIVDELHAFCGDDRGWHVRCLIQRVQRLAGRRIQVLGLTATVGNPK 201 Query: 222 DVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYI 281 + ++ +P TV+ + V ++++ ++V HAG + Sbjct: 202 FLIDWMLPGQPTTVIGAGHSGIDADLTIDFVGSLENAATVIFKL----HAGEK------- 250 Query: 282 ETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS 341 +VF +SR E+L+A L + R Sbjct: 251 -------------RLVFCDSRAKTEELSAVLRG-FGVR---------------------- 274 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 F++ H S+S ++R E+A +VATS+LELGID+G +D VIQ+ Sbjct: 275 -------TFVS---HSSLSADERRQAEKAFAEEPNCVIVATSTLELGIDVGDLDRVIQID 324 Query: 402 TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 P SVAS LQR+GR G + G + LF L+ ++ IV +E + PP P Sbjct: 325 APGSVASFLQRMGRTGRRKGEMRNCLFLATDDEGLMIASAIVRLWREDFVEPINPPVAPW 384 Query: 462 DVLAQQTVA 470 ++AQQ +A Sbjct: 385 HLVAQQGIA 393 >UniRef50_D0LTA5 3'-5' exonuclease n=2 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTA5_HALO1 Length = 925 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 161/589 (27%), Positives = 251/589 (42%), Gaps = 104/589 (17%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 ++A+++APT GKT AA L L G + R LYI+PIKAL + Sbjct: 39 KNAVILAPTAGGKTEAAMFPVLADLVAAPGLG-------PSVRALYIAPIKALLNNQAER 91 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 L + + + ER + GD A ER + R P D+L+TTPESL +ML S Sbjct: 92 LGLYTEMVGLERF------------LWHGDVGASERQRFLREPADLLMTTPESLEVMLIS 139 Query: 165 ---RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 E + VI+DE+HA+AG+ RGAHL +ERL QR+GLSATV + Sbjct: 140 PKIAVSEIFADLRVVIVDEIHALAGTDRGAHLMSVIERLAQHAGRDVQRVGLSATVGNPD 199 Query: 222 DVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 + ++L G R VV+PP + P R + + ++D G G + Sbjct: 200 AILSWLRGTSQRGDVVVDPP--KPPTRREL--LVHLD---------------GALGGL-- 238 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 G + + ++ F SR E++ RL + Sbjct: 239 ---AGRAAKRAAGKKSLFFCESRAQTEQIAERLGD------------------------- 270 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 + +VF+ HH +VS E+R E+ + G +V TS+LELGID+G +D V Q Sbjct: 271 -----RGVEVFV---HHSAVSLEERERAEERFQRGGDAAIVCTSTLELGIDVGDLDQVFQ 322 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHN 459 + P +V+S LQR+GR G + G V+ F ++ + ++E G +E+ Sbjct: 323 IGAPSTVSSFLQRMGRTGRRAGSVANTTFLCDEPESVLQAVALIELARVGWVESTPAQTR 382 Query: 460 PLDVLAQQTVAAAAMD-ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR---YPSGD 515 QT+A + ++ DE + +RR + FD + + R Y SG Sbjct: 383 CWPAFVHQTLAMSLQQGGVRRDELRAHLRRVPDLAGISDAEFDEVIAYMIRRGLLYDSGG 442 Query: 516 FSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELD 575 ++ +R R +L AV S Y V G R +G L+ Sbjct: 443 V-----LVMGSRGERAFGRRNFLELYAVFSSPQ-----YYRVHTQNG------REIGWLE 486 Query: 576 EEMVYESRVNDI--ITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRG 622 ++ V + V ++ LG +W + I Q V+ +P + P W G Sbjct: 487 QQFV-DGLVENMSSFLLGGRAWLVHAIHHGQRAVSVSPAPRGKKPSWGG 534 >UniRef50_B2JHB8 DEAD/DEAH box helicase domain protein n=11 Tax=Proteobacteria RepID=B2JHB8_BURP8 Length = 744 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 173/656 (26%), Positives = 261/656 (39%), Gaps = 164/656 (25%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTD------- 100 ++ A T +GKT AAFL L L R+ A R + +LYISP+KAL D Sbjct: 52 IIAAATAAGKTEAAFLPILSNLLRD-------APCRGS--VLYISPLKALINDQWSRLDG 102 Query: 101 VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL 160 + LQIP+ G GD + + + +NP +L+ TPESL Sbjct: 103 LCEALQIPVTGW-------------------HGDVSSGRKQRFVKNPTGVLLITPESLEA 143 Query: 161 MLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 M +R T + V++DE+HA GS+RG L ++R+D + R+GLSAT+ Sbjct: 144 MFVTRGASLAATFGALRYVVVDELHAFIGSERGMQLQSLMQRVDRVCGRRVPRVGLSATL 203 Query: 218 RSASDVAAFL---GG-----------------------DRPVTVVNPPAMRHPQIRIVVP 251 A FL G ++P + + P + +P + VVP Sbjct: 204 GDMRLAAGFLRPKGAASVQIVESAEAGQELKILVKGYVEKPPRIQSEPGIENPGLEDVVP 263 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + +D + + +VLR + ++F NSR R Sbjct: 264 ASTVDVANH-------------------------MYKVLRGSNNLIFPNSR--------R 290 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 ELYA L+R+ R + F HHGS+SKE R TEQAL Sbjct: 291 QVELYADLLRRA-----------------CERDGYPNEFW--PHHGSLSKELREQTEQAL 331 Query: 372 KSGEL-RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV------- 423 K G+ + T++LELGID+GAV V QV P SVAS QR+GR+G + G Sbjct: 332 KKGDRPASAICTTTLELGIDIGAVKSVAQVGAPPSVASLRQRLGRSGRRKGEAAILRCYC 391 Query: 424 ------SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPH----NPLDVLAQQTVAAAA 473 S R R LV S +V + G E PP +P ++ Q A Sbjct: 392 VEAELHSGSDLSDRLRESLVQSVAMVNLLLRGWFE---PPRAGGMHPSTLVQQILSIIAE 448 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 + +E + + P+ + + F A L L R +L Sbjct: 449 RGGARANELWDTLVAQGPFGAIDKATFTAILRGLGAR-------------------DLLV 489 Query: 534 ARPGAQLLAVTSGGTIPDR-GMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDIITL 590 G LL T+G + + Y+ + E + AG+R +G + + Sbjct: 490 QEAGGLLLHGTAGERLVNHYAFYASFSTDDEFRIVAGARVLGSVPVSRPLAP--GQGLVF 547 Query: 591 GATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGA 646 G WR+Q++ + V P + P + +GNG E+ + ++L DGA Sbjct: 548 GGQRWRVQEVDAAKKTVYVKPDQGGVPPVF--DGNGSLVH-DEVRREMFNVLKDGA 600 >UniRef50_C7MUN6 Lhr-like helicase n=4 Tax=Actinomycetales RepID=C7MUN6_SACVD Length = 702 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 136/431 (31%), Positives = 196/431 (45%), Gaps = 81/431 (18%) Query: 47 ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQ 106 AL++APT GKT AA L + E + +LY+ P+KAL ++ Sbjct: 42 ALLLAPTAGGKTEAACFPVLTAM---------EQQRWTGLSVLYVCPLKALLNNLLPR-- 90 Query: 107 IPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA 166 + D G RV + GD PA R + R+PPDIL+TTPES+ ML S Sbjct: 91 -----LRDYAAWLGR-----RVELWHGDVPATARRHILRDPPDILLTTPESVEAMLVSAN 140 Query: 167 RETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDV 223 E R + +++DEVHA AG RG HL LERL L QRIGLSATV + + Sbjct: 141 VEHQRLFGNLRAIVVDEVHAFAGDDRGWHLLAVLERLTVLAQRPIQRIGLSATVGNPEQL 200 Query: 224 AAFLGGD----RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 +L G RP TVV P + S+ G E + G + Sbjct: 201 LHWLQGSGRGHRPATVVAP---------------GVHAPSATPQGDIELDYVGSVDN--- 242 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 ++ + R +VF +SR L E+L A L Sbjct: 243 --AATVISALHRGEKRLVFCDSRQLVEQLGAAL--------------------------- 273 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 R++ F++ H S+S ++R E A +V+TS+LELGID+G +D VIQ Sbjct: 274 ---RMRGVTTFLS---HASLSVDERRRAEAAFAEARDCVIVSTSTLELGIDVGDLDRVIQ 327 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHN 459 + +P +VAS LQR+GR G + G LF ++ L+ +A ++E G +E + P Sbjct: 328 LDSPTTVASFLQRLGRTGRRAGSTRNCLFLALSQESLLWAAALLELWGRGYVEPVKAPLE 387 Query: 460 PLDVLAQQTVA 470 P ++AQQ +A Sbjct: 388 PRHIVAQQVLA 398 >UniRef50_C6IVI9 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVI9_9BACL Length = 746 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 142/444 (31%), Positives = 201/444 (45%), Gaps = 77/444 (17%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 H L+ + T SGKT AAF AL L+ E ILYI P+KAL D + Sbjct: 43 HLLIASGTASGKTEAAFFPALTELYHRPSESVG---------ILYIGPLKALINDQFERI 93 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 + E R GE + V GD E++KL + P +L TPESL +L +R Sbjct: 94 K--------ELLRDGE----VPVWHWHGDVAQAEKTKLMQRPSGVLQITPESLEGLLMNR 141 Query: 166 ARET---LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASD 222 + ++IDEVHA G+ RG + L RL+ + +RIGLSAT+ Sbjct: 142 PNAIPALFHDLRYIMIDEVHAFMGADRGIQVISQLTRLERMASCKPRRIGLSATLGDYEI 201 Query: 223 VAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPY 280 A +LG +PV VV+PP R ++++ V + D A E H E + Y Sbjct: 202 AARWLGAGTPQPVEVVSPPGGR--KLKLSVEHFSFPD----ARDEREAEHL--ELAKQKY 253 Query: 281 IETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT 340 I D R ++ +VFTNSR AE T L + A R +R Sbjct: 254 YNF-IYDNTHRKKA-LVFTNSRTDAELTTLELRRIAAKREER------------------ 293 Query: 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA-TSSLELGIDMGAVDLVIQ 399 DVF HHGS+S R TE AL+SG V A T +LELGID+G ++ VIQ Sbjct: 294 -------DVF--HVHHGSISAMLREETEAALRSGPGPAVAAATVTLELGIDLGELERVIQ 344 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD------------LVDSAVIVECMF 447 + P S +S +QR+GR+G + S+ +F D L+ + ++E Sbjct: 345 LGAPYSCSSFVQRLGRSGRRGDQASEMMFLCAEEEDEDAQLPARMPWTLLRAIAVIELYV 404 Query: 448 AGR-LENLTPPHNPLDVLAQQTVA 470 R +E + P+ VL QT++ Sbjct: 405 RERWVEPVELRKKPVGVLYHQTMS 428 >UniRef50_A1BIJ8 DEAD/DEAH box helicase domain protein n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BIJ8_CHLPD Length = 710 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 144/616 (23%), Positives = 255/616 (41%), Gaps = 112/616 (18%) Query: 40 VAARSEHALVIAPTGSGKTLAAFLYALDRL-FREGGEDTREAHKRKTSRILYISPIKALG 98 + A ++ ++ + T SGKT AAFL L ++ F + G ++LYISP+ AL Sbjct: 33 ILASDDNFILASRTASGKTEAAFLPILSKVDFNDSG-----------VQVLYISPLIAL- 80 Query: 99 TDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT--GDTPAQERSKLTRNPPDILITTPE 156 I D+ R E NL V + G+ + +L + P I++ TPE Sbjct: 81 -------------INDQFYRIEELCKNLDVTVTKWHGEANKTLKDRLIKQPTGIVLITPE 127 Query: 157 SLYLMLTSR---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGL 213 SL M ++ ++ ++ V+IDEVH+ G+ RG L L RL + S +GL Sbjct: 128 SLEAMFVNKPFNVKKLFSNLKYVVIDEVHSFIGTDRGTQLKSILSRLQRVNSQSFSIVGL 187 Query: 214 SATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGR 273 SAT+ ++ F+G ++ V+ + +++SV ++ Sbjct: 188 SATIGDYNEAKKFIGNEKNTKVLLDRTAK--------------EINSVFRFFKKEKEELP 233 Query: 274 EGSIWP-YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH 332 + YIET + ++F NSRG AE++ +L ++ + R++ P H Sbjct: 234 LELLKDLYIET-------KDNKVLIFPNSRGRAEEVAVKLKKI-SERVKGHP-------H 278 Query: 333 FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR--CVVATSSLELGID 390 + SHH SV +E R E K+ + C+ TS+LELGID Sbjct: 279 Y-------------------FSHHSSVDREVREYVEYFAKNNKRHNFCISCTSTLELGID 319 Query: 391 MGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGR 450 +G+VD V+Q+ S+AS +QR+GR+G + G S + T+ L+ S + C Sbjct: 320 IGSVDEVVQIDATHSIASLIQRVGRSGRKDGESSNLFLYATTQWSLLQS---IACWLLYN 376 Query: 451 LENLTPP---HNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 + PP P D+L Q ++ + + + E +++ + + + + + L Sbjct: 377 ESFIEPPEKNEKPYDILVHQALSITKSHSGILLTELIKQLKENSAFNSIEQSEVEEILQN 436 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 L E L ++ V + R YSV + EE Sbjct: 437 LI-------------------EIDFLEKLQREVIVGVQGEKVVNSREFYSVF--KTEENF 475 Query: 567 GSRRVGELDEEMVYESRV--NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 G E+ + ++ ++ I L A W+I + + P + + P + G G Sbjct: 476 KVVNAGNTIGEIPFSPQIIEDENILLSAKIWKITFVDHKAKKIEVIPAKDGKKPIFFGGG 535 Query: 625 NGRPAELGEMIGDFLH 640 ++ E + + L+ Sbjct: 536 AILHQKIREKMFEILY 551 >UniRef50_C7RDI1 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RDI1_ANAPD Length = 696 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 129/452 (28%), Positives = 202/452 (44%), Gaps = 86/452 (19%) Query: 31 TAVQPQTWHVAARSEHALV-IAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRIL 89 T +Q + +E L+ IAPT +GKT AAFL A+ ++ K RIL Sbjct: 25 TKIQKASIREFYETEDNLIFIAPTAAGKTEAAFLPAI----------SKANEFDKGLRIL 74 Query: 90 YISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPD 149 YISP+ AL D + + + DE + + V G+ + KL NP Sbjct: 75 YISPLIALINDQFKRVF----AMCDE--------IGISVTSWHGEANQTRKEKLLENPSG 122 Query: 150 ILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHT 206 I + TPESL + ++ AR+ G++ +I+DE+H+ RGA L L+R+ A Sbjct: 123 ICLITPESLEAIFVNKSLEARKLFTGLDYIIVDEIHSFLTGNRGAQLRSLLKRILAYTEK 182 Query: 207 SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTG 266 + + IGLSATV GD + + + +++V ++ +++ + S Sbjct: 183 NPRFIGLSATV-----------GDLNYHICKGFFKNNRETKLIVD-SSKNELEATISYDE 230 Query: 267 EDSHAGREGSIWPYIETGILDEVLRHRS---TIVFTNSRGLAEKLTARLNELYAARLQRS 323 ED +I +D++L S + F NSR L E+L +L + Sbjct: 231 ED-----------HISDKTVDQILSFASDGSMLAFPNSRKLVEELAVKLKK--------- 270 Query: 324 PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS--GELRCVVA 381 A+ +V + +F SHH SVSK +R E K+ GE + A Sbjct: 271 --------------KASEEQVNTQ-IF---SHHSSVSKNKRKEIEDFAKNREGENFIICA 312 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR--DLVDS 439 TS+LELGID+G+V + Q + S+ S QR+GR+G + G K + DLV S Sbjct: 313 TSTLELGIDIGSVYSICQYGSTFSILSLAQRLGRSGRKTG---KSILHQIATNPWDLVQS 369 Query: 440 AVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 + GRL+ + P P DV A Q ++ Sbjct: 370 LATIILFKEGRLDKIYPIKCPYDVFAHQILST 401 >UniRef50_C5RNG9 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=C5RNG9_CLOCL Length = 722 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 191/781 (24%), Positives = 303/781 (38%), Gaps = 157/781 (20%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 +H ++ + T SGKT AAF L L+ + + ++YI P+KAL Sbjct: 41 DHVIIASGTASGKTEAAFFPILTTLYNQPS---------NSVGVMYIGPLKAL------- 84 Query: 105 LQIPLKGIADERRRRGE--TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML 162 I D+ R E E + V GD + + + IL TPESL +L Sbjct: 85 -------INDQFERLSELLEESYIPVWPWHGDISQSIKKRALKEAKGILQITPESLEALL 137 Query: 163 TSR---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS 219 A+ + V+IDE+HA G+ RG + L RL+ + +RIGLSAT+ Sbjct: 138 MRHPGDAKRLFSDLRFVVIDEIHAFMGTDRGLQVLCLLSRLEKITDCYPRRIGLSATLND 197 Query: 220 ASDVAAFL--GGDRPVTVVNPPAMRHPQ-IRIVV--------PVANMDDVSSVASGTGED 268 FL G R V VV RH + I + V P+ + V ++ Sbjct: 198 YEPAQHFLASGTRRGVKVVG--IKRHARTISLCVESFQLPKEPLKAENIVKEYNEFLYQN 255 Query: 269 SHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV 328 SH + ++FTNSRG AEK+ L + AR Sbjct: 256 SHK---------------------KKCLIFTNSRGGAEKVITDLKNIAYAR--------- 285 Query: 329 DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA-TSSLEL 387 Q +DVF HHGS+S R E AL+ E V A T +LEL Sbjct: 286 ----------------QETDVFFV--HHGSISAALRREAETALRDAEGATVTAATLTLEL 327 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF-----------FPRTRRDL 436 GID+G +D IQ+ P S +S +QR+GR+G + G S+ LF F R +L Sbjct: 328 GIDIGDLDSTIQIGAPYSCSSFVQRLGRSGRRTGK-SQMLFVNIFEESDKNLFERLPWEL 386 Query: 437 VDSAVIVECMFAGR-LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 + + I++ R +E P ++A QT++ S + P +L Sbjct: 387 LRAIAIIQLYLEERWVEPFYMKEKPFSLVAHQTLSVLM----------SYGELSPP--EL 434 Query: 496 PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL-TARPGAQLLAVTSGGTIPDRGM 554 R V +L S +R L + E L G ++ + + Sbjct: 435 ARNVL-----LLPAFRNSISQDEYREILQYMLENDYLQKVENGGIIVGIKGERIVNHYSF 489 Query: 555 YSVLLPEGEEKAGSR--RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 Y+V E S+ +G LD + + L WR+ ++ ++ I+ Sbjct: 490 YAVFQDEQVFHVHSQEGEIGTLDN----CPAIGEAFVLAGNMWRVLELDENRKIIYVRSI 545 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQ 672 +++R+P W G G ++ I L ++ S L E A G++E Sbjct: 546 KNSRIPIWNGSGGHIHTKVVHRIRRILTENVRYSYLSPNASEVLEEARKTAKNSGMLENN 605 Query: 673 -----RNATGIVP--GSRHL-VLER-----CRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 N+ + P GS+ + ++R +D + + + S Y + V + Sbjct: 606 VIPYSANSFYLCPWVGSKEMKTIKRLLSYGLKDFLQIYSVSGGSHYLQITSGLSVVEVVN 665 Query: 720 RIHALWGADASVVASDDGIVA------RIPDTDGKLPDAAI---FL---FEPEKLLQIVR 767 ++H L SV +D +V +I DG +PD + FL E ++I+R Sbjct: 666 KLHEL-----SVDCDNDNMVLTEKQAPKIDKYDGMVPDNLLRKAFLHNELNVESAVKILR 720 Query: 768 E 768 E Sbjct: 721 E 721 >UniRef50_B8I966 DEAD/DEAH box helicase domain protein n=8 Tax=cellular organisms RepID=B8I966_CLOCE Length = 741 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 128/449 (28%), Positives = 198/449 (44%), Gaps = 75/449 (16%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI--LYISPIKALGTDVQ 102 +H L+ A T SGKT AAFL L +L H++ +S I LYI P+KAL D Sbjct: 42 DHLLLAAGTASGKTEAAFLPVLTQL-----------HEKPSSTIGVLYIGPLKALINDQF 90 Query: 103 RNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML 162 L LK EV++ V GD +++ ++P IL TPESL M+ Sbjct: 91 LRLDDLLK------------EVDIPVWHWHGDVSQSHKNRFMKDPRGILQITPESLESMI 138 Query: 163 TSRARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS 219 +R E R + +IIDEVH S RG + LERL +RIGLSAT+ Sbjct: 139 INRDNEISRIFGDLRFIIIDEVHVFMESDRGRQVLCLLERLSRYFEKEPRRIGLSATLGD 198 Query: 220 ASDVAAFLGGDRPVTVVNPPAMRHPQ-IRIVVP---VANMDDVSSVASGTGEDSHAGREG 275 S +LG V P Q IR+ V +++ D S + + +D + Sbjct: 199 YSLAEKWLGSGTKRRVATPKTETSQQKIRLAVEHFYISDPIDSKSKLTISSKDEVKEQNL 258 Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES 335 + Y E + + + ++F N+R AE++ L ++ A+ + P Sbjct: 259 TTDKYYE--YIHSKCKAQKCLIFANNRTEAEQVITNLRQI--AKAKSLPD---------- 304 Query: 336 TSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV-ATSSLELGIDMGAV 394 I HHGS+S R EQA+++ + V AT +LELGID+G + Sbjct: 305 ---------------IYHVHHGSISASLREAAEQAMRAQDHPAVTAATVTLELGIDIGHL 349 Query: 395 DLVIQVATPLSVASGLQRIGRAG------------HQVGGVSKGLFFPRTRRDLVDSAVI 442 + VIQ+ P SV+S LQR+GR+G ++ + KG + L+ + I Sbjct: 350 ERVIQLGAPFSVSSFLQRLGRSGRRGSPPEMWFACYEEASMDKGALPAQIPWQLIQTIAI 409 Query: 443 VECMFAGR-LENLTPPHNPLDVLAQQTVA 470 ++ R +E + P ++ Q ++ Sbjct: 410 IQLYLEERWIEPIEQKKCPFSLMYHQIMS 438 >UniRef50_C7PFC4 DEAD/DEAH box helicase domain protein n=2 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFC4_CHIPD Length = 716 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 156/605 (25%), Positives = 242/605 (40%), Gaps = 123/605 (20%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRL-FREGGEDTREAHKRKTSRILYISPIKALGTDVQR 103 ++ ++++ T SGKT AAFL L ++ F+E G ++LY+SP+ AL D Sbjct: 39 DNYILVSRTASGKTEAAFLPILSKVDFKEPG-----------VQVLYVSPLIALIND--- 84 Query: 104 NLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT 163 + D R +++ + G+ + KL + P +L+ TPES+ + T Sbjct: 85 ----QFVRVEDLCRY-----IDVSITRWHGEANQAAKKKLLKQPEGVLLITPESIESLFT 135 Query: 164 SR---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRI-GLSATVRS 219 + AR ++ ++IDE+H GS RG HL L R++ L RI GLSATV Sbjct: 136 NHPEHARALFSRLKFIVIDEIHTFLGSDRGMHLRSLLSRINDLAADKKPRIVGLSATVGD 195 Query: 220 ASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 + F G V+ P + R + +E P Sbjct: 196 YEEPKRFTGDPAHTKVLIDPTAKGINARF--------------------KYFKQEDEYTP 235 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 + ++V + ++F N+RG AE++ A +L+R Sbjct: 236 QFIEELYNQV-KDSKVLIFPNTRGNAEEI--------AVKLKR----------------- 269 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR--CVVATSSLELGIDMGAVDLV 397 S R + F SHH +V KE R E K+ + C+ TS+LELGID+G V+ V Sbjct: 270 VSERKKGHPYFF--SHHSAVDKELREYVEDFAKTNKRNNFCIACTSTLELGIDIGTVETV 327 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 IQV S+AS +QR+GR+G + G S+ L + + S E +E + Sbjct: 328 IQVDATHSIASLIQRVGRSGRREGHESQLLLYATEHWSTLQSFACWELFKEQFVEPVYSQ 387 Query: 458 HNPLDVLAQQTVA----------AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD-M 506 P D++ QT++ A + LQ + +SR A D+ LD M Sbjct: 388 EKPYDLMFHQTLSILKETNGLGRQALLQRLQNNPVFSRFSAAE---------IDSLLDYM 438 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 + Y R +L+ E LT R YS+ + K Sbjct: 439 IKSEY----IEDLRRELIVGAEGEKLTT----------------SRDFYSMFMSAVMLKV 478 Query: 567 --GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP-FWRGE 623 +GEL E+ VND I L A W+I I + P + P F G Sbjct: 479 IHAGVTIGEL--ELTPWLEVNDNILLSAKIWKIADIDLKAKKIFVIPANDGKKPVFTSGS 536 Query: 624 GNGRP 628 G+ P Sbjct: 537 GDVHP 541 >UniRef50_D2BWD9 DEAD/DEAH box helicase domain protein n=6 Tax=Gammaproteobacteria RepID=D2BWD9_DICD5 Length = 732 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 160/618 (25%), Positives = 251/618 (40%), Gaps = 121/618 (19%) Query: 40 VAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGT 99 V AR + L+ A T +GKT A FL A + G I+YISP+KAL Sbjct: 35 VLARDQDVLISAGTAAGKTEAFFLPACSAISDITG----------GFGIIYISPLKALIN 84 Query: 100 DVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY 159 D R L+ GE +++ V GD P ++ K+ +P IL+ TPESL Sbjct: 85 DQYRRLE-----------SLGEV-LDMPVTPWHGDVPQSKKKKIRTDPAGILLITPESLE 132 Query: 160 LMLTSRA---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQ---RIGL 213 +L + + ++ V ++IDE HA G++RG L L R+D +L A R+ L Sbjct: 133 SLLINSSGWIKQAFSPVAYIVIDEFHAFIGTERGMQLLSLLNRIDHVLGRHANPVPRVAL 192 Query: 214 SATVRSASDVAAFLGGDR--PVTVV---NPPAMRHPQIR-IVVPVANMDDVSSVASGTGE 267 SAT+ V L D+ P +V N A Q++ VPV GE Sbjct: 193 SATLGELDKVPELLRPDQRLPCKIVTDSNNTATLQVQVKGYQVPVPE----------KGE 242 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 + + E + I + R S +VF NSR E + A L+++ Sbjct: 243 EPQSSAEKHVCADIF-----RLCRGDSHLVFANSRKRTESIAATLSDI------------ 285 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL-RCVVATSSLE 386 V ++ F HHGS+S+E R E L+ G L V T +LE Sbjct: 286 ------------CEENVVPNEFF---PHHGSLSRELRETLEARLQQGNLPTTAVCTMTLE 330 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAG-------------HQVGGVSKGLFFPRTR 433 LGID+G V VIQV P SV+S QR+GR+G Q + G+ R R Sbjct: 331 LGIDIGKVQSVIQVTPPHSVSSLRQRMGRSGRRDSPSVLRMLISEQELTATSGI-VDRLR 389 Query: 434 RDLVDSAVIVECMFAGR-LENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAP 491 LV S ++ M R E L Q +A A ++ D+ +S++ + P Sbjct: 390 LQLVQSMAMIRLMITKRWFEPADARQMHYSTLLHQILAITAQWGGVRADQLWSQLCQTGP 449 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++++ F L + G G+LT +++ G + + Sbjct: 450 FRNIDLTDFKTLLRHMGG-------------------NGLLTQLASGEMVIGAEGEKLTN 490 Query: 552 RGMYSVLLPEGEE---KAGSRRVGE--LDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 + + EE GSR +G +D ++ + I G W++ +I ++ + Sbjct: 491 HYTFYAVFNTPEEFRIVTGSRTLGTVPVDSPLLPDQH----IIFGGRRWKVTEIEVEKKV 546 Query: 607 VTPAPGRSARLPFWRGEG 624 + + + P + G G Sbjct: 547 IYVEATKGGQPPQFSGGG 564 >UniRef50_Q47TW5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=1 Tax=Thermobifida fusca YX RepID=Q47TW5_THEFY Length = 736 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 146/495 (29%), Positives = 210/495 (42%), Gaps = 103/495 (20%) Query: 12 PDVFSPATRD---------WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 PD FS RD W Q A+QP + + + L+ A T GKT A F Sbjct: 15 PDAFSLLHRDVQRWVWEQRWTSLRPIQEQAIQP----IISGNVDVLLAAATAGGKTEAVF 70 Query: 63 LYALDRLFREGGEDTREAHKRKTS-RILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 L L R+ H T + + +SP+KAL I D+ R Sbjct: 71 LPVCSVLARDAD------HGEATGIQAVCLSPLKAL--------------INDQHARLTA 110 Query: 122 TEVNLRVGIRT--GDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR---ETLRGVETV 176 ++V + GD ++ +L +P IL+ TPESL M R + R + + Sbjct: 111 LCARIKVPVTAWHGDIGVTQKDRLRGDPAGILLITPESLEAMFVRRGSTVSQLFRDLRYI 170 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL---GGDRPV 233 ++DE+H+ G+ RGA L + RL+ RIG+SAT+ A FL G++ V Sbjct: 171 VVDELHSFLGTARGAQLRSLMNRLEHAAGRRVSRIGMSATLADLRAAAEFLRPGHGEQVV 230 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 V + + +++ VA+M + +H L +V+R Sbjct: 231 VVEDQHGGKELLLQLRGYVADMRSDPGTSMSPDALAH---------------LYQVVRTG 275 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 +VF NSRG E + L+ L AR +R P + F Sbjct: 276 HNMVFVNSRGAVESCVSALSAL--ARQERLP-----------------------NPFF-- 308 Query: 354 SHHGSVSKEQRAITEQALKSGEL-RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 HHGS+S E RA EQ LK+ VV TS+LELGID+G VD V+Q+ P SVA QR Sbjct: 309 PHHGSLSAELRAHAEQRLKNRSAPATVVCTSTLELGIDVGWVDTVVQLGVPPSVAGLRQR 368 Query: 413 IGRAGHQVGGVSKGLFF------------PRTRRDLVDSAVIVECMFAGRLE--NLTPPH 458 +GR+G GG + L+ R R DLV + +VE + + E NL PH Sbjct: 369 LGRSGR--GGAAAKLYLYITEQAHPDMPVDRLRLDLVQTVAMVELLLSRWYEPPNLDTPH 426 Query: 459 NPLDVLAQQTVAAAA 473 L L QQ ++ A Sbjct: 427 --LSTLVQQILSVLA 439 >UniRef50_D0LS76 DEAD/DEAH box helicase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LS76_HALO1 Length = 711 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 175/640 (27%), Positives = 248/640 (38%), Gaps = 111/640 (17%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107 +V+APT GKT AAF L R+ E + + +LY+SP++AL + Sbjct: 44 VVLAPTAGGKTEAAFFPVLSRVLSE---------RWQPVPVLYVSPLRALLNN------- 87 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--- 164 + R R V L G GD A ++ L PP IL TPESL ++L + Sbjct: 88 -----QEGRITRMAEAVGLATGTWHGDVSAAKKRALLAAPPHILSITPESLEVLLITAPE 142 Query: 165 RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS-AQRIGLSATVRSASDV 223 RA L V I+DEVHA+A RGAHL LERL QRIGLSATV + ++ Sbjct: 143 RAEALLSRVRVAIVDEVHALAADPRGAHLLSVLERLQQRAGGGHIQRIGLSATVGNPEEL 202 Query: 224 AAFL---GGDRPVTVVNPPAMR-HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 AA+L G P VV P R P R + D + Sbjct: 203 AAWLQGSGAQAPPLVVAPSGERKEPLFRFCASQGDGDAALRI------------------ 244 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 DE+ R +VF R AE L +GA Sbjct: 245 -------DELGAGRKRLVFVEGRRQAEAL----------------------------AGA 269 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 S R + V HH SV + QR E+A + +VATSS+ELGID+G +D V Q Sbjct: 270 VSARGTRAWV-----HHSSVGRAQREEAERAFEEARDAVLVATSSMELGIDIGDLDQVYQ 324 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHN 459 P +V+S QR+GR+G + G + F + DL+ + + G +E + P Sbjct: 325 RDAPTTVSSLAQRLGRSGRRPGTTPQMTFLLKQPEDLLVALAVTSLFERGWVEPVHPSSR 384 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF 519 VL Q A + L+ +R + A + +P F D + Sbjct: 385 LWTVLVHQMFA----NLLETGG-LTRAQLVARLRSVP--AFAGIGD--------NEQHGL 429 Query: 520 RPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV--LLPEGEEKA---GSRRVGEL 574 LV E G L G LL V R + + + E A G +VG L Sbjct: 430 IVHLV---EEGWLDEHDGVLLLGVRGEREFGRRNFFRLYAVFDTSETFAVRHGQEQVGTL 486 Query: 575 DEEMVYE-SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGE 633 D V + S + L +W++ + + + P + P W G + + E Sbjct: 487 DRWFVLQLSARRPVFRLAGRAWKVIEFDLRRSALRVVPAEAGTAPQWTGRASILSRPVCE 546 Query: 634 MIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 I + + A T WLA + G+ QR Sbjct: 547 RIRELVTEDGTPAHLDATCSAWLAHARGLYADVGVDRVQR 586 >UniRef50_B8J8Q2 DEAD/H associated domain protein n=3 Tax=Cystobacterineae RepID=B8J8Q2_ANAD2 Length = 1419 Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 124/410 (30%), Positives = 167/410 (40%), Gaps = 78/410 (19%) Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W V R+ ++ R PV+ + R L Q P T Sbjct: 1055 WCERGVLARIHRLTIGRLRREIEPVSTAVFLRFLARWQHAAPGTR-------------LH 1101 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G G++ VI QL G A WE +LPARV+ Y +LD L A+G V W D Sbjct: 1102 GTSGLLEVIGQLQGFHAAAGAWERDLLPARVQAYEPRLLDALCASGEVAWGRLHVAPPQD 1161 Query: 1195 GL-------------VALHLQE---YAAESFTPAEADQANRSALQQAIVAVLADGGAWFA 1238 GL V L L+E + E+ T A A+ + +V VLA GA F Sbjct: 1162 GLPPRRRGAPTRSAPVTLALREDLPWLLEA-TAAGAEPPPLGTIAAELVEVLARRGASFL 1220 Query: 1239 QQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR 1298 +++Q +R + GE+ +EALW LV G + D +A LRAL RT Sbjct: 1221 GELAQAVRTEAGEA------EEALWELVSGGRVACDGFAGLRALVSPPPGHRT------- 1267 Query: 1299 ARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLD--------RY 1350 RP A GRW+LL+ P AL E L+ RY Sbjct: 1268 ----RPAAA--------------GGRWALLRAGPPAPGAEADALPEATLEPLARQYLRRY 1309 Query: 1351 GIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLA 1410 G++ R + E P + + + R++E G I GRFV G G QFA +D LR Sbjct: 1310 GVVFRDLLAREARPPPWRDLVRVYRTLEARGEIRGGRFVSGFSGEQFAAPEAVDALRATR 1369 Query: 1411 TQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSG 1460 +A + P+ + A DP N+ G L P P PA AG VVV G Sbjct: 1370 REAAED---APLEVCAADPLNLAGILTPGPRIPAA------AGGRVVVGG 1410 >UniRef50_Q2J8S7 DEAD/DEAH box helicase-like n=3 Tax=Actinomycetales RepID=Q2J8S7_FRASC Length = 753 Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 136/440 (30%), Positives = 197/440 (44%), Gaps = 63/440 (14%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107 L++APT GKT A L L R+ E K + +LY+ P++AL NL+ Sbjct: 64 LLLAPTAGGKTEAVALPLLSRMAGE---------KWRGLSVLYVCPLRAL----LNNLEP 110 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--- 164 L + + RR + GD R +L +PPD+L+TTPES+ ML S Sbjct: 111 RLAAMCEWLGRRA--------AVWHGDVADSVRGRLAVDPPDLLLTTPESIEAMLVSARV 162 Query: 165 RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVA 224 R G+ TV++DEVHA AG RG HL L RL L + + QRIGLSATV + + Sbjct: 163 DHRWLFAGLRTVVVDEVHAFAGDDRGWHLLGVLARLRGLANRAVQRIGLSATVGNPDVLL 222 Query: 225 AFL--GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE--GSIWPY 280 +L G RP VV P + A ++ + + G + GS+ Sbjct: 223 DWLADGSARPRAVVRPSDVTATTDVTATTDATATTDATATTDATATTEVGIDYVGSL--R 280 Query: 281 IETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT 340 ++ + + +VF +SR E+LT L +L Sbjct: 281 NAALVVARLHQGMKRLVFCDSRSQVEELTVALRDL------------------------- 315 Query: 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV 400 R S H S+S++ R E A + +VATS+LELGID+G +D VIQ+ Sbjct: 316 GVRTYVS--------HSSLSRDDRRQAEAAFATSTNCVIVATSTLELGIDVGDLDRVIQI 367 Query: 401 ATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNP 460 P +V S LQR+GR G + G LF ++ L +A I G +E + PP P Sbjct: 368 GAPATVISFLQRLGRTGRRPGTRRNTLFLATSQNSLWLAAAITLLWQRGYVEPVVPPVLP 427 Query: 461 LDVLAQQTVAAAAMDALQVD 480 ++AQQ + A + VD Sbjct: 428 RHIVAQQILGLALQEGRLVD 447 >UniRef50_B0C714 DEAD/DEAH box RNA helicase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C714_ACAM1 Length = 733 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 133/517 (25%), Positives = 217/517 (41%), Gaps = 87/517 (16%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 A++ W Q A+ P + A + ++ A T GKT AAFL +L + Sbjct: 21 ASKKWPSLREIQELAIPP----ILAGDKDVIITAATAQGKTEAAFLPVFSQLVDQPA--- 73 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 K +++ + P+KAL D R L I D +++ V GD + Sbjct: 74 ------KGIQVIGLGPLKALINDQHRRL----SAIGDC--------LDVPVCPWHGDIGS 115 Query: 138 QERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKRGAHLA 194 + +L + P +L+ TPESL + R +E R + ++IDE+H+ +RG L Sbjct: 116 GPKQRLLKQPAGVLLITPESLEALFVLRGQELNRLFASLSYIVIDEMHSFISIERGRQLQ 175 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 ++R++ ++ RIGLSAT+ S A FL RP + ++++V A Sbjct: 176 SLMQRVEQVVGRPVPRIGLSATLGDMSLAAEFL---RP--------GQQERVQLVQSFAK 224 Query: 255 MDDVS----SVASGTGEDSHAGREGSIWPYIETGI---LDEVLRHRSTIVFTNSRGLAEK 307 D++ S D + + P I L + LR ++F NSR E+ Sbjct: 225 GDELKLQLRGYRSSPTPDPDEEEDETTPPPDALDIAQHLFQSLRGEKNLIFINSRRQVER 284 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L L A R P+ + HHGS+SKE RA Sbjct: 285 YADILRNLSAEY--RVPNEFM-------------------------PHHGSLSKELRAEA 317 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ALK V+ T +LE+GID+GAV + Q+ P SVAS QR+GR+G + G + Sbjct: 318 EEALKRDHPVNVICTMTLEMGIDVGAVQSIAQIGPPSSVASTRQRLGRSGRRAGDPAIMR 377 Query: 428 FFPRTRR-------------DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 + + DLV + I+ + G E + L QQ +++ A Sbjct: 378 VYVSVPQLDSYTSPEQALYPDLVQAIAIINLLLEGWYEPPIAGRLHISTLIQQLLSSIAQ 437 Query: 475 D-ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR 510 ++ D+ + A P++++ + +F L L R Sbjct: 438 QGGIRADQAWHDFCEAGPFQEMEQGLFIKLLRCLGER 474 >UniRef50_Q07GR1 ATP-dependent helicase, putative n=5 Tax=Alphaproteobacteria RepID=Q07GR1_ROSDO Length = 726 Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 141/510 (27%), Positives = 209/510 (40%), Gaps = 109/510 (21%) Query: 33 VQPQTWHVAARSEHALVIA-PTGSGKTLAAFL----YALDRLFREGGEDTREAHKRKTSR 87 +Q + S++ L++A T GKT AAF LD GG D Sbjct: 27 IQARAIRTICESDNDLIVAASTAGGKTEAAFFPLISQVLDAPAEGGGFD----------- 75 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 +LYI P+KAL TD L+ GI E L V GD +++ +NP Sbjct: 76 VLYIGPLKALITDQAGRLE----GICQE--------AGLPVVPWHGDVSQSVKTRAMKNP 123 Query: 148 PDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 IL+ TPESL + R E R V+IDE+H V S+RG L L RL+ + Sbjct: 124 KGILLITPESLEALFVRRGLEVARLFGATRAVVIDELHTVLDSERGVQLRSLLTRLELAI 183 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDR--PVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 +RIGLSAT+ A+L D VT++ ++++ + Sbjct: 184 KRPIRRIGLSATLGDMDLARAYLRPDNAEKVTLIEAEG-GEAELKL--------QLRGYL 234 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 SG +D+ ++ + L E LR +VF +R + E+YA RL+ Sbjct: 235 SGGEDDNTPSATDAVAAH-----LFEHLRGSDNLVFAGAR--------QRVEIYADRLRN 281 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK-SGELRCVVA 381 + H HH S+S++ R+ E+ LK S + V Sbjct: 282 ----LCEQEHLPQE---------------FYPHHASLSRDHRSFVERRLKDSSKPTTAVC 322 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG-------------VSKGLF 428 TS+LELGID+G V V Q+ P +VA+ QR+GR+G + G S F Sbjct: 323 TSTLELGIDIGDVTCVAQIGAPFTVAALRQRLGRSGRREGQPAILRQYAVETRLTSDSSF 382 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPP-----------HNPLDVLAQQTVAAAAMDAL 477 R R L+ S +++ + G E PP H L V+AQ+ A A + Sbjct: 383 VDRLRLGLIRSIAMIDLLLEGWCE---PPKSQALHLSTLVHQILSVIAQRGGAPANI--- 436 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 YS + R P++ + +F L L Sbjct: 437 ----LYSVLCREGPFRQVTVAMFTDVLRAL 462 >UniRef50_D1VE26 DEAD/DEAH box helicase domain protein n=1 Tax=Frankia sp. EuI1c RepID=D1VE26_9ACTO Length = 784 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 140/494 (28%), Positives = 209/494 (42%), Gaps = 119/494 (24%) Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 PT GKT AA L R+ E + T +LY+ P+KAL ++ L+ Sbjct: 58 PTAGGKTEAAAFPVLSRMASENWQGTS---------VLYLCPLKALLNNLAPRLESYTGW 108 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS---RARE 168 + R + GD R+++ R PD+L+TTPESL ML S R Sbjct: 109 LGR------------RAAVWHGDVTESRRNRIRRERPDVLLTTPESLEAMLVSVRTDHRG 156 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL------------------------ 204 GV T+++DEVHA AG RG HL LERL ++ Sbjct: 157 FFVGVRTIVVDEVHAFAGDDRGWHLLAVLERLRRIVAAERTAINDLCVPRNGVVACEQPA 216 Query: 205 ------HTSA--------------QRIGLSATVRSASDVAAFLGGD----RPVTVVNP-- 238 H + Q IGLSATV + ++ +L G RP V+ P Sbjct: 217 QPAGSGHGAGLAEERPAGAAPPELQVIGLSATVGNPEELLRWLQGSRVGRRPARVIAPDL 276 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAG-----REGSIWPYIETGILDEVLRHR 293 P + + PVA+ D+++ + T AG GS+ +L + + Sbjct: 277 PTAQAVPLPTAPPVASPPDLATSGAATRAAPPAGDIELDYVGSV--SNAAKVLAALHQGE 334 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 +VF +S+ + E+L L L G T+ F++ Sbjct: 335 KRLVFCDSKKIVEELGQALRSL----------------------GVTT--------FLS- 363 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 H S+S ++R +E+A +V+TS+LELGID+G +D VIQ+ P +VAS LQR+ Sbjct: 364 --HASLSVDERRRSEEAFAQARNCVIVSTSTLELGIDVGDLDRVIQINAPGTVASFLQRL 421 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GR G + G + LF + LV +A ++ G +E + PP P ++AQQ +A Sbjct: 422 GRTGRRPGTLRNCLFLALSESALVHAAGLLLLWGRGWVEPVVPPPEPRHIVAQQLLAYCL 481 Query: 474 M-----DALQVDEW 482 D VDEW Sbjct: 482 QEGRIGDQTWVDEW 495 >UniRef50_C5B5W2 Putative DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5W2_METEA Length = 746 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 156/504 (30%), Positives = 221/504 (43%), Gaps = 77/504 (15%) Query: 13 DVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVI-APTGSGKTLAAFLYALDRLF 70 D+ PA R W + + +Q + RS+ +++ A T SGKT AAFL A+ L Sbjct: 13 DLLHPAVRRWVAEKGWSGLRPMQARAIEAVLRSDADVIVSAGTASGKTEAAFLPAVSSL- 71 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 A T IL +SP+++L D L+ GE V L V Sbjct: 72 --------AASPVATVGILSVSPLRSLINDQHGRLE-----------SLGEA-VGLPVTR 111 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR--ARETLRG-VETVIIDEVHAVAGS 187 G+T +++ +L RNP I+I TPESL +L R + E + G + V++DE+HA Sbjct: 112 WHGETRPEDKERLRRNPSGIVIITPESLEALLLRRRGSVERMFGHLRHVVVDELHAFLAG 171 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RGAHLA L RLD + +RIGLSAT+ AA+L P VV Sbjct: 172 DRGAHLASLLVRLDVAVGRRIRRIGLSATLGDPRAAAAWLRPSDPGKVV----------- 220 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 VV + + E +IE I E L +R T + LA++ Sbjct: 221 -VVAEQGTKPIETRLEAVLEQRRPD-------WIED-IEAEELGYR-----TGTAQLADR 266 Query: 308 LTARLNE---LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 L RL E L A +RS DA + S N HHGS+SK R Sbjct: 267 LAPRLAEGKNLIFAGSRRSVETLADALRRRAESSGFDNAFH--------PHHGSLSKVYR 318 Query: 365 AITEQAL-KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 E AL + G VAT++LELGID+G V+ V+ V P S+A+ QR GR+G + G V Sbjct: 319 QQVEDALRRPGTPATAVATTTLELGIDIGPVERVVNVGPPRSLAALRQRAGRSGRREGTV 378 Query: 424 -------------SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 + + DLV +A + + AG +E L VL Q + Sbjct: 379 PTLDLAVVLRPPAADCGPLEDIQPDLVCAAAAIHLLHAGYVEPPADSPASLSVLCHQILC 438 Query: 471 -AAAMDALQVDEWYSRVRRAAPWK 493 AAA+ + D + + RAAP++ Sbjct: 439 IAAALAPVDADRLAAILGRAAPFR 462 >UniRef50_B7L2W3 DEAD/DEAH box helicase domain protein n=7 Tax=Alphaproteobacteria RepID=B7L2W3_METC4 Length = 755 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 124/394 (31%), Positives = 178/394 (45%), Gaps = 76/394 (19%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS-RILYISPIKALGTDVQR 103 + L+ A T +GKT AAFL L T A + + +LY+SP+KAL Sbjct: 52 DDVLIAASTAAGKTEAAFLPIL----------THIADRTEPGLSVLYVSPLKAL------ 95 Query: 104 NLQIPLKGIADERRRRGETEVNLRVGIR--TGDTPAQERSKLTRNPPDILITTPESLYLM 161 I D+ +R G+ + + + GD P ++++ P I + TPES+ + Sbjct: 96 --------INDQFQRLGQLCERMEIPLVRWHGDAPQSAKARMLAKPAGIALITPESIEAL 147 Query: 162 LTSR---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL-LHTSAQRIGLSATV 217 L R A L ++ V++DEVHA RG HLA L R+DAL + +R+GLSAT+ Sbjct: 148 LVRRPVDAAGLLTALDFVVVDEVHAFLTGPRGLHLASLLGRVDALGVPGRTRRVGLSATI 207 Query: 218 RSASDVAAFLGGDRPVT------VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHA 271 S AA+L RPV + + Q+RI+ + +D A + Sbjct: 208 GDVSTAAAWL---RPVAPERVRLIPDGGTGMDLQLRILGYLEPLD-----ADASEGADAD 259 Query: 272 GREGSIWPYIETGILDEV---LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV 328 + P I D + LR + +VF SR RL E A L+R Sbjct: 260 AGASANTPMALAAITDHLFAALRGSNNLVFGGSR--------RLVEFLADGLRRR----- 306 Query: 329 DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL-RCVVATSSLEL 387 S R++ + F HHG++SKE R E LK L V TS+LEL Sbjct: 307 ------------SERLEVPNEFF--PHHGNLSKELREELEARLKDASLPTTAVCTSTLEL 352 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 GID+G+V V QV P S+AS QR+GR G + G Sbjct: 353 GIDIGSVRSVAQVGAPRSLASLRQRLGRTGRRQG 386 >UniRef50_B8IW51 DEAD/DEAH box helicase domain protein n=2 Tax=Methylobacterium RepID=B8IW51_METNO Length = 783 Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 173/665 (26%), Positives = 264/665 (39%), Gaps = 138/665 (20%) Query: 48 LVIAPTGSGKTLAAFLYALDRLF--REGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 ++ A T +GKT AAFL L R+ R+GG R +LY+SP+KAL D R L Sbjct: 58 ILAARTAAGKTEAAFLPLLSRVLPKRDGG--------RPGFSLLYVSPLKALINDQFRRL 109 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 + L+ ++ + GD A + + P +++ TPESL L R Sbjct: 110 ESLLEA------------CDMPLHRWHGDVSADAKRRARERPQGVVLITPESLEATLVRR 157 Query: 166 ARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALL-HTSAQRIGLSATV---- 217 RE R ++ ++IDE+HA G++RG L L R++A R+GLSAT+ Sbjct: 158 GREAPRLFGALDAIVIDELHAFIGTERGRQLQSVLSRIEACAGRDRIDRVGLSATLGDMD 217 Query: 218 -------RSASDVAAFL--------------GGDRPVTVVNPPAMRHPQIRIVVPVANMD 256 ASD + G +RP+ P P+ R+ P Sbjct: 218 LAREALRPGASDAVTLVESQEGGTELLLQIRGYERPLRQPTAP----PKDRLQQPSGPGP 273 Query: 257 DVSSVASGTGEDSHAGREGSIWPYIETGI---LDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + A+ D A +E + L EVLR R ++F SR E T RL Sbjct: 274 NEEREAASAVPDLCAVEAIQTASLVEEPVARHLFEVLRGRRNLLFAGSRQNVEIYTDRLR 333 Query: 314 ELY-AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 L AARL + F A HHG++S+ +R E L+ Sbjct: 334 ALSEAARL--------------------------PNEFFA--HHGNLSRAERETVELRLR 365 Query: 373 -SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF-- 429 VAT++LELGID+G V+ V Q+ SV+S QR+GR+G + G + + Sbjct: 366 EDARPTTAVATTTLELGIDIGDVESVAQIGPGWSVSSLRQRLGRSGRRPGKPAVLRIYVI 425 Query: 430 -----------PRTRRDLVDSAVIVECMFAGRLENLTPPHN---PLDVLAQQTVA-AAAM 474 R R DLV + +VE + E PP L L QT+A Sbjct: 426 EDEAGPTLHPADRLRLDLVQAVAMVELLLERWCE---PPRTRGLHLSTLVHQTLALIVQT 482 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 L+ + + P++++ R +F L ++ P + P G+L Sbjct: 483 GGLRPGTAWQLLCEHGPFRNVSRDLFVEVLRSMA--RPEAELVEMSPD-------GLLML 533 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDIITLGA 592 P + L T+G ++V E + GSR +G + + I Sbjct: 534 GPRGERL--TAG-----HDFFAVFQSPEEYRIVEGSRPLGTVPLDTTLAP--GQTIIFAG 584 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT- 651 W I+ + +V P +A P + G G G L + + + A SGT Sbjct: 585 RRWCIETVDERAKVVVVIPTNAALPPRFDGSGAG----LHDRVAAAMR-----ACLSGTH 635 Query: 652 IPPWL 656 +PP+L Sbjct: 636 VPPFL 640 >UniRef50_B4SBA5 DEAD/DEAH box helicase domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SBA5_PELPB Length = 734 Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 152/640 (23%), Positives = 243/640 (37%), Gaps = 125/640 (19%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTRE 79 + W Q A+ P + A + ++ A T +GKT AAFL +L Sbjct: 26 QKWMTLRDAQERAIAP----ILAGNTDVIIAAATATGKTEAAFLPICSKLL--------- 72 Query: 80 AHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR--TGDTPA 137 A + + + +LYISP+KAL I D+ R + L + + GD Sbjct: 73 AKECQNASVLYISPLKAL--------------INDQFSRMEQLCERLDIPVHPWHGDVSV 118 Query: 138 QERSKLTRNPPDILITTPES---LYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 ++ K + P IL+ TPES L++ S + + ++IDE+H+ GS+RG L Sbjct: 119 SKKGKFLKKPTGILLITPESVEALFVNHGSAVPQIFNNLLYIVIDELHSFIGSERGQQLQ 178 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L R++ + RIGLSAT+ + FL RP T + I+V A Sbjct: 179 SLLHRIEFAIKRKIPRIGLSATIGDMHLASRFL---RPET--------EAKTVIIVSNAT 227 Query: 255 MDDVSSVASGTGEDS---HAGREGSIWP----YIETG-ILDEVLRHRSTIVFTNSRGLAE 306 ++ + G + H E P +E G L + LR +S ++F NSR E Sbjct: 228 GQELQLLLRGYVNKAPLLHPIEETEEVPPDGSSLEIGEDLFKTLRGKSNLIFPNSREQVE 287 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + L + H + HHG+++K R Sbjct: 288 NFSDLLRN------------KCEEQHLPNEFWP---------------HHGNLAKGLREE 320 Query: 367 TEQALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E A+K +V TS+LE+GID+G+V + Q+ P SVAS QR+GR+G + G Sbjct: 321 AEAAIKDKSHPVNIVCTSTLEMGIDIGSVISIAQIGVPPSVASLRQRLGRSGRKDGD--- 377 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 P R + +T PL L + AM L +++WY Sbjct: 378 ----PAILRIYIQE------------NEVTISSKPLACLRSNLIQTIAMVRLLLEKWY-- 419 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRY-------------PSGDFSAFRPKLVWN--RETG 530 P L L L +Y +G F ++ + R G Sbjct: 420 --EPPPSGGLHLSTMVQQLLSLIAQYGGITAVQAYNLLCKNGAFQEIGQQMFVDLLRTLG 477 Query: 531 ----ILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRV 584 I+ A G L + Y+ E + G R +G L + E V Sbjct: 478 NQRLIMQASDGLLLHGQLGERIVNHYSFYAAFTTPEEYRLLTGDRTLGTLPLDRPVE--V 535 Query: 585 NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 N ++ G W + + + +++ P +LP + G+ Sbjct: 536 NSLLIFGGRRWTVLDVDAQKKVISLKPATGKKLPQFDGQA 575 >UniRef50_Q30VA0 DEAD/DEAH box helicase-like n=2 Tax=Desulfovibrio RepID=Q30VA0_DESDG Length = 986 Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 150/517 (29%), Positives = 210/517 (40%), Gaps = 128/517 (24%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS---------------EHALVIAPTGS 55 +P +PATR W P AVQ H S H +V PT S Sbjct: 36 IPARTAPATRPW-------PRAVQEVMLHAGVGSLYTHQALATDHIRAGRHVVVATPTAS 88 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKTL L +++ H +T R LY+ P+KAL D L + Sbjct: 89 GKTLIYNLPVIEQFL----------HNPET-RALYLFPLKALAQDQLATL--------NA 129 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---G 172 + I GDT A R K+ R PP++L+T PE L+L + + R G Sbjct: 130 LTAHWAADARPAAAIYDGDTTAWFRKKIRRQPPNVLLTNPEMLHLSILPHHEQWTRFLAG 189 Query: 173 VETVIIDEVHAVAGSKRGAHLAL---SLERLDALLHTSAQRIGLSATVRSASDVAAFLGG 229 + V++DE H G G+H+A LER+ + + SATV + +++AA L G Sbjct: 190 LSFVVVDEAHTYRGVL-GSHMAQLFRRLERICTRYGAAPSFVFSSATVGNPAELAANLTG 248 Query: 230 DRPVTVVN---PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286 RPV V+ P RH V +D S AS A Sbjct: 249 IRPVPVLESGAPQGRRH--------VVFIDPPESPASTAILLLKA--------------- 285 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQS 346 + R TIV+ SR + E L L+A S +G ++R+ + Sbjct: 286 -ALARGLRTIVYCQSRRMTE-----LISLWAG----------------SKAGGYADRISA 323 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 G + +E+R I E + SG+L V+ TS+LELGID+G++DL I V P +V Sbjct: 324 YRA-------GFLPEERRDI-EARMHSGQLLAVITTSALELGIDIGSLDLCILVGYPGTV 375 Query: 407 ASGLQRIGRAGHQ---------VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-LTP 456 S LQR GR G G + +F R D F EN + Sbjct: 376 MSTLQRGGRVGRAQQESAVVLVAGEDALDQYFMRHPDDF----------FERPPENAVLN 425 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDE-WYSR--VRRAA 490 PHNP+ +L + AAA L V E W + VR+AA Sbjct: 426 PHNPV-ILERHLECAAAEFPLDVHEPWLTDTAVRQAA 461 >UniRef50_Q5V826 ATP-dependant helicase n=1 Tax=Haloarcula marismortui RepID=Q5V826_HALMA Length = 812 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 119/411 (28%), Positives = 178/411 (43%), Gaps = 88/411 (21%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 E+ +V PT SGK+L + AL+R G + LYI+P++AL D Sbjct: 72 ENTVVATPTASGKSLTYAVPALERAVDHSG------------KALYIAPMRALINDQAGT 119 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL---- 160 LQ + GE + VG++TG + E + + PD+L+ T + L+L Sbjct: 120 LQAMADALG-----FGE---QVDVGVKTGQSSKAETRSIKQRQPDVLLATIDQLHLSFLP 171 Query: 161 --MLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH---TSAQRIGLSA 215 LT R + +ETVIIDEVH G G+H AL RL+ LL Q I SA Sbjct: 172 YAHLTDHWRWLFQQLETVIIDEVHTYRG-YFGSHAALIFRRLNRLLDHYGKDPQYICCSA 230 Query: 216 TVRSASDVAAFL-----------------GGDRPVTVVNPPAMRHPQIRIVVPVANMDD- 257 T+ + D AA + GD+ NPP + R A++D+ Sbjct: 231 TIGNPVDHAAAVTGRPTDSFTLVDNDTSASGDKQWVFWNPPQ----KDREDDSTADVDEE 286 Query: 258 VSSVASGTG---------EDSHAGREGSIWPYIETG--ILDEVLRHRSTIVFTNSRGLAE 306 +S G G +DS G E + ++E+ D V R T+VFT +R E Sbjct: 287 TASTQQGAGQAGETTATQDDSDVGGE-RLSQHVESVRIFADLVTRGYQTLVFTAARQGTE 345 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + + +R + + +V A +H ++ E+R Sbjct: 346 QYVDWADSKLRSRGEHDIADSVHA------------------------YHAALESERRRE 381 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 E LKSG++R + +T +LELGID+G++D VI P + S QR GRAG Sbjct: 382 LEAGLKSGDIRGLWSTRALELGIDIGSLDAVILDGYPGTGMSTFQRAGRAG 432 >UniRef50_C8RVX3 ATP-dependent DNA helicase (Fragment) n=2 Tax=Corynebacterium RepID=C8RVX3_CORJE Length = 245 Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 27/228 (11%) Query: 1332 PLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEG 1391 PL+ E L +E +DRY +++R AV+ E GGF + EDSG ++RG VEG Sbjct: 17 PLDAAELALVRSEAWIDRYAVVTRGAVVTEKAAGGFAEAYRTLSAWEDSGEVLRGYIVEG 76 Query: 1392 LGGAQFAERLTIDRL--------RDLATQATQTRHYTPVALSANDPANVWGNLLPWP--- 1440 LGGAQFA R I +L RD AT P LS DPAN +G+ LPWP Sbjct: 77 LGGAQFAPRDVISQLRRAQDGRSRDAGEPATP--GNAPQLLSVLDPANPFGSTLPWPEVS 134 Query: 1441 -AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE-------EL--LAPE--- 1487 + + PTR AGA+++++ G+ Y+++GGK + ++ + EL AP+ Sbjct: 135 RSTAEGISPTRTAGAMIIIAAGRAEAYVSRGGKNVSLFSRPDFGDATSAELGASAPQIDL 194 Query: 1488 VFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 V AL A+R + T+ +VN V T AG +P+GL Sbjct: 195 VVGALKEAIRAQRLSPVTIEKVNGSSVMDIAT-TDWVAAGARLTPKGL 241 >UniRef50_C1ZM72 Lhr-like helicase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM72_PLALI Length = 689 Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 188/454 (41%), Gaps = 85/454 (18%) Query: 43 RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ 102 R ++ A T +GKT AAFL L D A + R LYI P+KAL Sbjct: 3 RKSDLILAARTAAGKTEAAFLPILS--------DVCTA-PVGSVRALYIGPLKAL----- 48 Query: 103 RNLQIPLKGIADERRRRGETEVNLRVGIR--TGDTPAQERSKLTRNPPDILITTPESLYL 160 I D+ RR E + + GD A ++ +L P +L+ TPESL Sbjct: 49 ---------INDQFRRLEELCEYAEIPVHRWHGDVSADKKKQLVTCPGGVLLITPESLES 99 Query: 161 MLTSRA---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 +L +R+ + V+IDE+HA+ G++RG L L RLD T + + LSAT+ Sbjct: 100 LLINRSTALSRIFHSLSFVVIDELHALLGNERGTQLRSQLYRLDHHAITRPRILALSATI 159 Query: 218 RSASDVAAFL---GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 A ++ D + + + Q R+ +D +DS Sbjct: 160 GDLKAAAEWIRPGDQDSVEIICDEGDEKRIQFRLHAYSQILD----------KDSDPSDP 209 Query: 275 GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE 334 + P L + R ++F NS+ + E T RLNEL Sbjct: 210 EYVSPEDVFQELFDNYRGSKNLIFANSKSVIELTTDRLNEL------------------- 250 Query: 335 STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAV 394 + + + F+ HHGS+SK+ R TE+ ++ + +S+LELGID+G V Sbjct: 251 ------GRKNSTGEEFLI--HHGSISKDIREETERLMQGQRPYTAICSSTLELGIDIGNV 302 Query: 395 DLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF-------------PRTRRDLVDSAV 441 V Q+ SV+S LQR+GR+G + G + F R DL+ Sbjct: 303 RGVGQIGPCWSVSSMLQRLGRSGRRDGETHQLRMFIIEKHPGAHSELSDRLYPDLLQGIA 362 Query: 442 IVECMFAGRLENLTPPHNPLDV--LAQQTVAAAA 473 + E M +E +P P D+ L QQ ++ A Sbjct: 363 LTELMLDRWVE--SPRTRPFDLSTLTQQILSVIA 394 >UniRef50_Q02AZ8 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=Q02AZ8_SOLUE Length = 786 Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 107/381 (28%), Positives = 165/381 (43%), Gaps = 71/381 (18%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 +H +++ PT SGKTL L L+ L R+ G +R +Y+ P KAL D Sbjct: 91 KHVVIVTPTASGKTLCYNLPVLNLLLRDEG-----------ARAMYLFPTKALAEDQLHE 139 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY---LM 161 Q ++ + E +R GDTP Q+ + R+ ++++T P+ L+ L Sbjct: 140 FQGAVEEMGSE----------IRAFTYDGDTP-QDARRAIRSRANVVLTNPDMLHSGILP 188 Query: 162 LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVR 218 +R + ++IDE+H G G+HLA L RL + ++ Q I SAT+ Sbjct: 189 HHTRWARYFENLRYIVIDELHYYRGVY-GSHLANLLRRLSRICEFYNSKPQFICCSATIA 247 Query: 219 SASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV--PVANMDDVSSVASGTGEDSHAGREGS 276 + ++A L G+ V A R + I PV N G A Sbjct: 248 NPKELAEALTGEPFELVERNGAPRGEKFFIFYNPPVVNRQ------LGIRRSYIAETRRM 301 Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST 336 +IE + T+VF N+R E L L + R P Sbjct: 302 ALKFIENNL--------QTLVFANNRLATEVLVTYLKDA----CDRGP------------ 337 Query: 337 SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 + S V R + G +R EQ+L++G++R VVAT++LELGID+G++D Sbjct: 338 -------IPSETV---RGYRGGYLPRERREIEQSLRAGKIRAVVATNALELGIDIGSLDA 387 Query: 397 VIQVATPLSVASGLQRIGRAG 417 V+ P ++AS QR GRAG Sbjct: 388 VVMAGYPGTIASSWQRAGRAG 408 >UniRef50_C4FC75 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC75_9ACTN Length = 838 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 116/410 (28%), Positives = 162/410 (39%), Gaps = 85/410 (20%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 ++ L+ A T SGKT AAF L + + T LYI P+KAL D + Sbjct: 39 DNVLLTASTASGKTEAAFFPILTEFWE---------NPPATVGALYIGPLKALINDQFQR 89 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 L K E + V GD + ++KL + P IL TPESL +L Sbjct: 90 LDALCK------------EAGIPVWRWHGDVSSSHKAKLLKKPSGILQITPESLEALLLH 137 Query: 165 RARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 R R + V+IDEVH++ RG +ERL + + +RIGLSAT+ Sbjct: 138 RHAAVGRLFGDLRYVVIDEVHSLLRGDRGGQALCLIERLSRMAGVNPRRIGLSATIGDPE 197 Query: 222 DVAAFLGGDRPVTVVNPP----------AMRH-----PQ-IRIVVPVANMDDVSSVASGT 265 AFL V P +M H PQ + V + V G Sbjct: 198 RTGAFLSSGTGRGCVIPRFEEPRRTWRLSMEHFYMAGPQALERAVEALGALEADVVHGGN 257 Query: 266 GEDSHAGREGSI--WPYIET---------------GILDEVLRHRSTIVFTNSRGLAEKL 308 + +A E I P E G + E R R +VF NSR AE + Sbjct: 258 PHEPYADDEVCIDALPSGEIMARTDIAPQEADPGLGYIFEHTRGRKCLVFVNSREEAEAV 317 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 + L A Q P + HHG++S R E Sbjct: 318 CSCLRSYCEA--QHEPGRFL-------------------------IHHGNLSASYRESAE 350 Query: 369 QALKSGELR-CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 + ++ E R V T++LELGID+G ++ Q+ P +V+S LQR+GR G Sbjct: 351 ELMRDDEQRQTTVTTATLELGIDIGRLERAFQIDAPFTVSSFLQRMGRTG 400 >UniRef50_C0WD26 DEAD/DEAH helicase n=13 Tax=Bacteria RepID=C0WD26_9FIRM Length = 756 Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 109/388 (28%), Positives = 163/388 (42%), Gaps = 68/388 (17%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTD-VQR 103 ++ L+ A T SGKT AAF L LF +A+ K+ +YI P+KAL D QR Sbjct: 39 DNLLLTASTASGKTEAAFFPILS-LF--------DANPPKSVGCIYIGPLKALINDQFQR 89 Query: 104 NLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT 163 + G N+ + GD ++KL R+P IL TPESL +L Sbjct: 90 LTDLCSDG-------------NIPIWHWHGDVSQSHKAKLMRHPSGILQLTPESLEAILL 136 Query: 164 SRARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSA 220 + R + V+IDEVH++ RG +ER+ L + +RIGLSAT+ Sbjct: 137 HKHMAVPRLFGDLRFVVIDEVHSLLRGDRGGQTLCLIERVSRLAGVNPRRIGLSATMGDP 196 Query: 221 SDVAAFLGGDRPVTVVNPP----------AMRHPQIRIVVPVANMDDVSSVASGTGEDSH 270 AFL + P ++ H ++ D+ ++ + Sbjct: 197 ERTGAFLSLGTGRRTIIPRIQSKGSRWRLSLEHFYVKDTQAGEGRTDIKALPVLDEKTDT 256 Query: 271 AGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA 330 A RE P + G + E R + +VF NSR E +T L + Sbjct: 257 APREAD--PGL--GYIFEHTRGKKCLVFVNSREECEGVTTSLRQYCELN----------- 301 Query: 331 AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS-GELRCVVATSSLELGI 389 +D F+ HHG++S R E +K + V TS+LELGI Sbjct: 302 --------------HEADRFLI--HHGNLSASYRETAEMLMKDESKPLTTVTTSTLELGI 345 Query: 390 DMGAVDLVIQVATPLSVASGLQRIGRAG 417 D+G ++ Q+ P +V+S LQR+GR G Sbjct: 346 DIGRLERAFQIDAPWTVSSFLQRMGRTG 373 >UniRef50_C7R1M0 DEAD/DEAH box helicase domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R1M0_JONDD Length = 861 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 148/518 (28%), Positives = 216/518 (41%), Gaps = 85/518 (16%) Query: 2 ADNPDPSSLLPDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 A P S P PA R +R Q H + TGSGK+LA Sbjct: 46 AARPAQHSAWPQWVHPAVRQALTVRGASSAWTHQATAAQAIHDGHHVALATSTGSGKSLA 105 Query: 61 AFLYALDRLF--REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 ++ AL + R GG +R R + LY++P KAL D LQ L + Sbjct: 106 FWVPALTSIMSTRSGGSISRH---RDRATALYLAPTKALAHDQLAALQKLLSAGGLD--- 159 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML---TSRARETLRGVET 175 ++RV GDT ER + + DI++T P+ L+ L R LRG+E Sbjct: 160 ------SVRVDAVDGDTSFDER-RWVQAHGDIILTNPDFLHYALLPGHERWSRFLRGLEF 212 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 +IIDE H G GAH++L + RL QR+ VA + GG PV V Sbjct: 213 LIIDEGHTYRGVF-GAHVSLIVRRL--------QRL-----------VAHYRGGRMPVVV 252 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI-W--PYIETG-------- 284 V HPQ + +D V + T + S +GR+ + W P E+G Sbjct: 253 VASATSAHPQQSAARLIGVSED--EVVAVTEDGSPSGRQTIVLWQPPQRESGFTQAPSDV 310 Query: 285 ---ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA--VD-----AAHFE 334 ++DE+ V + G A+ L+ + + R P+ A VD AH Sbjct: 311 VPGVVDELTGGWDHSVDDDLTGGADDLSGVITDAPVPSQPRRPATAEAVDLLADLTAHGA 370 Query: 335 STSGATSNR-------VQSSDVFI---------ARSHHGSVSKEQRAITEQALKSGELRC 378 T T +R V + D + ++ G E+R E ++SG +R Sbjct: 371 RTLAFTRSRRAAEYLAVHTRDELLMSVPQLADSVAAYRGGFLPEERRALEAGVRSGSIRA 430 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 + +T++LE+GID+ +D+V+ V P + S Q+ GRAG S GL R D +D Sbjct: 431 LASTNALEMGIDISGLDVVLIVGWPGTRMSLWQQAGRAGR---AGSDGLVVFIAREDPLD 487 Query: 439 SAVIV--ECMFAGRLE-NLTPPHNPLDVLAQQTVAAAA 473 + V+ E +F LE + P NP VL AAAA Sbjct: 488 TYVVSHPEAIFGAPLEATVFDPTNPY-VLGGHLCAAAA 524 >UniRef50_A4XK34 DEAD/DEAH box helicase domain protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XK34_CALS8 Length = 700 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 121/472 (25%), Positives = 195/472 (41%), Gaps = 104/472 (22%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 +T D F ++ + VQ + + L+ +PT SGKT AA ++RL Sbjct: 17 STWDMFFGSYGRLKDVQRKAIPKILEGKDILICSPTASGKTEAACAPLIERL-------- 68 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 + K ILYI P +AL D+ ER ++ + +TGD A Sbjct: 69 --KSRFKVWTILYICPTRALVNDIY------------ERLYSRLIYYDINILRKTGDYQA 114 Query: 138 QERSKLTRNPPDILITTPESLYLMLTSRAR------ETLRGVETVIIDEVHAVAGSKRGA 191 + ++ P+ILITTPES M+ R + L V VI+DEVH + GS RG Sbjct: 115 EFKT-----IPNILITTPESFDSMMC-RGKLKNGFGHILSCVYAVILDEVHLLYGSSRGE 168 Query: 192 HL-------------ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 + A + D Q I +SAT++ + + D + Sbjct: 169 QVRWLLERLRRLKAQAFKEKWCD---DEKIQIIAMSATMKEPEKILKYYIPDGEII---- 221 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 A +I ++ D++ S+ + +I + + +D R + ++F Sbjct: 222 KAEGKREINLI-----SDEIVSI------------DETILKHFCS--IDFQNRFKKILIF 262 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 NSR + L A L + ++ S+ I SHHGS Sbjct: 263 CNSRNKVDALVAELRSV----------------------------LKDSNYQIV-SHHGS 293 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH 418 ++K +R TE+ LK E V++S+ E+GID+G++DLV+ PL + S LQRIGR Sbjct: 294 LAKSEREETEEILKRHERVIAVSSSTFEIGIDIGSIDLVVLAEAPLDMNSFLQRIGRGNR 353 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 + + L + L+ A++ C G L N T N V+ QQ ++ Sbjct: 354 KNERIDVLLCAENDTQRLIQKAMLF-CAQNGILLN-TAAGNIFHVIIQQIIS 403 >UniRef50_A8ZT74 DEAD/DEAH box helicase domain protein n=2 Tax=Deltaproteobacteria RepID=A8ZT74_DESOH Length = 959 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 141/454 (31%), Positives = 197/454 (43%), Gaps = 100/454 (22%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 E+ + PT SGKTL + L RL + ++R LY+ P+KAL D R Sbjct: 75 ENVVAATPTASGKTLIYNIPVLQRL-----------KENPSARALYLYPLKALARDQLRA 123 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 LQ G A G E + I GDT A R K+ NPP +L+T P+ L+L L Sbjct: 124 LQ-ETAGAA------GMAEA-VSAAIYDGDTTAWHRKKIRDNPPSVLMTNPDMLHLGLLP 175 Query: 165 RARET----LRGVETVIIDEVHAVAGSKRGAHLALSLERL-DALLHTSAQRIGL--SATV 217 ET + V+IDE+H G G+H+A RL H A + + SAT+ Sbjct: 176 Y-HETWHTFFANLAFVVIDEIHTYRGVM-GSHMAHVFRRLYRVCTHHGAAPLFVAGSATI 233 Query: 218 RSASDVAAFLGGDRPVTVVN----PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGR 273 + ++A L G RP T V P RH V M+ V+ + T + A Sbjct: 234 ANPEELAGQLTG-RPTTAVTKSGAPRGKRH--------VVFMNPVTGPVATTIQLLRAA- 283 Query: 274 EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF 333 + R TIV+T SR LAE L ++A + +SP AH Sbjct: 284 ---------------LYRGLRTIVYTQSRKLAE-----LISIWAEK--KSPH-----AHQ 316 Query: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 S+ A G + E+R I E+ L +GEL V++TS+LELGID+G Sbjct: 317 ISSYRA-----------------GFLPDERREI-ERKLSAGELLAVISTSALELGIDIGD 358 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN 453 +DL + V P SV + QR GR G + G S + D +D + G + Sbjct: 359 LDLCLLVGYPGSVMATWQRGGRVG-RAGQESAMILI--AGEDALDQYFMRN---PGAFLS 412 Query: 454 LTP------PHNPLDVLAQQTVAAAAMDALQVDE 481 L P P NP ++ + V AAA L+VDE Sbjct: 413 LPPEAAVINPDNPA-IVEKHLVCAAAEHRLRVDE 445 >UniRef50_A1RZW9 DEAD/DEAH box helicase domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZW9_THEPD Length = 854 Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 88/231 (38%), Positives = 122/231 (52%), Gaps = 19/231 (8%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R ++PT +Q R E+ L++APTGSGKT AFL L L E REA + + Sbjct: 72 RELREPTPIQVLGIPRILRGENVLLVAPTGSGKTECAFLPVLHFLAAE-----REAGRLE 126 Query: 85 TS-RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 +LYI+P++AL +DV R L+ ++ + VG+ D E++KL Sbjct: 127 PGVYVLYITPLRALCSDVARRLRSYVRSALGD---------GYLVGVWHADIKKNEKTKL 177 Query: 144 TRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 PP +L+TTPESL +L + R R+ L + VI+DEVH +A SKRG HL + LERL Sbjct: 178 AEKPPLVLVTTPESLEAILDTKHRFRKHLAKLRWVIVDEVHELAESKRGLHLLVLLERLK 237 Query: 202 ALLHT-SAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVV 250 A QRI +SATV +A GG D V VV P +R +V+ Sbjct: 238 ATFGIPRLQRILISATVGDPRRIARLFGGSDGKVRVVRDPGLRRIDAEVVL 288 Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 98/360 (27%), Positives = 154/360 (42%), Gaps = 43/360 (11%) Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGS+ +R E+ K E++ VV T +LELGID+G+V+ V QV +P A QR+G Sbjct: 339 HHGSMGASKRREAERKFKDREVKAVVCTRTLELGIDVGSVERVFQVGSPSLPAYFAQRVG 398 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 RA H+ G ++G DLV+SA I+ + G P +D+ +Q +A Sbjct: 399 RASHRPGEPARGTLVCLDMNDLVESAAILSMLGRGSFGARRGPPPAMDLALRQALALVLQ 458 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 + + L L P+ R L E G++ Sbjct: 459 HGDKAGA----------------QAVAELLGSLLSHVPASWGLGAREALRVLEERGLVEE 502 Query: 535 RP-----GAQLLAVTSGGTIPDR----GMYSVLLPEGEE---KAGSRRVGELDEEMVYES 582 R G + + GG P+ G + ++PE E + G RVG +D + Sbjct: 503 REVVDVYGERARVLRLGGRFPEAWRKIGAFFTMIPERSELEVRHGRERVGVVDVVNLRLM 562 Query: 583 RVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL 642 + +I LG WR++++ VIV P +P WRG P +G + FL Sbjct: 563 KRGVVIRLGGKCWRVKELRGRFVIVEPEASDRFAIPVWRGGYVLAPQSVGLEVYRFLSKA 622 Query: 643 AD--------GAFFSGTIPPWLAEENTIANIQGL--IEEQRNATGI-VPGSRHLVLERCR 691 A G + SG + L EE +GL + E+ +A G+ +PG R +V++R + Sbjct: 623 ARLHRRGTSLGEWRSGGVAFRLDEEAR----RGLAVLAEELSARGVPMPGPRRMVVDRVK 678 >UniRef50_B2SWA3 ATP-dependent DNA helicase n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=B2SWA3_XANOP Length = 447 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 109/355 (30%), Positives = 154/355 (43%), Gaps = 60/355 (16%) Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 YAR L E Q V S G D + V+ QL G PA LWES++LPA Sbjct: 6 YARFLFEWQRV-------------DSRRRVAGPDALAGVVGQLEGFEAPAVLWESELLPA 52 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLV-----ALHLQEYAAESFT--PAEADQ 1216 RV DY LDEL G +W+ + G G + L AA+ ++ AD+ Sbjct: 53 RVHDYQPAWLDELCTAGRTLWARVRPGGGRSGAALRSTPIMLLPRRAAQRWSALARHADE 112 Query: 1217 ANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIW 1276 A + + ++ VL GA F ++I+ G + + L++AL L+ +G D + Sbjct: 113 APLGSRAEHVMQVLHQQGALFFEEIAD------GAHLMTTELEDALSELLMRGRAHCDSY 166 Query: 1277 APLRALTRSSSNARTSTRRSHRAR----------RGRPVYAQPVSPRVSYNTPNLAGRWS 1326 A LRAL +S R S HR R R PV A P PR Sbjct: 167 AGLRALLVPASK-RPSALSRHRRRASALGIRDAGRWAPVCALPELPRAEAG--------- 216 Query: 1327 LLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCR---SMEDSGRI 1383 E DT + +A +L RYG++ + + E P + L R +E G I Sbjct: 217 ----ERHQDT--LEHVARTLLRRYGVVCWR--LLEREAAWLPPWRELLRMYQRLEARGEI 268 Query: 1384 MRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLP 1438 GRF+ GL G QFA I LR + QA + + +SA+DP+N+ +LLP Sbjct: 269 RGGRFIAGLSGEQFALPDAIAALRRVCAQALPQQW---ICVSASDPSNLLCSLLP 320 >UniRef50_B2SVX9 ATP-dependent RNA helicase n=15 Tax=Proteobacteria RepID=B2SVX9_XANOP Length = 831 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 110/413 (26%), Positives = 170/413 (41%), Gaps = 96/413 (23%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R Q + Q W R EH ++ PT SGK+L L + G Sbjct: 74 RGISQLYSHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMTSG----------- 122 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 ++ LY+ P KAL D L E R GE + ++ GDTP R + Sbjct: 123 -AKALYLFPTKALAQDQVAELL--------ELNRAGE--LGVKAFTFDGDTPGDARQAI- 170 Query: 145 RNPPDILITTPESLY---LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 R DI+++ P+ L+ L ++ + + V+IDE+H G G+H+ L RL Sbjct: 171 RLHGDIVVSNPDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGV-FGSHVTNVLRRLK 229 Query: 202 ---ALLHTSAQRIGLSATVRSASDVAAFL--------------GGDRPVTVVNPPAMRHP 244 A + Q I SAT+ + A L GD+ V + NPP Sbjct: 230 RICAFYGATPQFILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPP----- 284 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 V N D + AS + + R I++G+ T+VF +R + Sbjct: 285 -------VVNAD-LGLRASARSQSNRIARIA-----IKSGL--------KTLVFAQTRLM 323 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 E LT L +++ ++ P I R++ G +R Sbjct: 324 VEVLTKYLKDIFDHDPRKPPRI--------------------------RAYRGGYLPTER 357 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 E+A+++G + +V+TS+LELG+D+GA+D+VI P SVA+ QR GRAG Sbjct: 358 REVERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAATWQRFGRAG 410 >UniRef50_Q6BK52 DEHA2F24838p n=6 Tax=Saccharomycetaceae RepID=Q6BK52_DEBHA Length = 1187 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 109/417 (26%), Positives = 189/417 (45%), Gaps = 73/417 (17%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 H +V T SGK+L L ++ + + + +K++ +I P KAL D +R+L Sbjct: 338 HVIVSTSTSSGKSLIYQLPIINDILW----NISKGNKKRECTAFFIFPTKALAQDQKRHL 393 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML--- 162 Q +K + + R+ + V GDTP Q+RS + R DI+ T P++++ + Sbjct: 394 QEFIKHLTVTQNRQ------IIVDTYDGDTPCQDRSSI-RTFADIIFTNPDAIHASILPN 446 Query: 163 ---TSRARET----LRGVETVIIDEVHAVAGSKRGAHLALSLERL---------DALLH- 205 TS R + L ++ V++DE+H G+ G H++ + RL D ++ Sbjct: 447 HSGTSFDRSSWHDFLSALKYVVMDELHVYKGT-FGMHVSYVMSRLMRIVTNLRKDQAIYP 505 Query: 206 -TSAQRIGLSATVRS-ASDVAAFLGGDRPVTVVNPPAMRHP--QIRIVV--PVANMDDVS 259 + Q I SAT+++ S A G +V+ P + ++VV P A M+ Sbjct: 506 LNNLQFISCSATIKNPVSHFRAVCGISSKEKIVHVYEDGSPCSEKKLVVWNPPALMNKKG 565 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHR----------STIVFTNSRGLAEKLT 309 S TG + P T + E + IVF R + E + Sbjct: 566 QTPSSTGFGKSNSLNSVLVPRENT--ISESAKLLLQLLNSLSTIKVIVFCPIRVVCELMM 623 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 + L + +P+ SG++ + SD+ S+ G SK R + E+ Sbjct: 624 KEIRSLLS-----NPTF----------SGSS---LSESDIM---SYRGGYSKSDRRVIEE 662 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 + +G+LR ++AT++LELGID+ +D+VI P+S ++ Q+ GRAG G +S+G Sbjct: 663 KMFNGKLRAIIATNALELGIDLSDLDVVITCGFPMSKSNLHQQFGRAGR--GSISQG 717 >UniRef50_C0QJG3 ATP-dependent DEAD/DEAH box helicase family protein n=2 Tax=Deltaproteobacteria RepID=C0QJG3_DESAH Length = 978 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 105/378 (27%), Positives = 163/378 (43%), Gaps = 74/378 (19%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 H ++ PT SGK+L L L R + S LY+ P+KAL D L Sbjct: 70 HTVIATPTASGKSLVYNLPVL-----------RAIYGDNASCGLYLFPLKALARDQLGTL 118 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 + + G+ + L + GD A ++K+ NPP++L+T PE L+L + Sbjct: 119 ETLMAGV------NAKIADTLTAAVYDGDLSAYHKAKVRNNPPNVLLTNPEMLHLAMLPH 172 Query: 166 AR---ETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL-HTSAQRIGL--SATVRS 219 ++ V++DEVH G G+H+A RL + H A+ + + SAT+ + Sbjct: 173 HHLWESFFANLKFVVVDEVHTYRGVM-GSHMAWVFRRLLRICRHYGAEPVFVFCSATISN 231 Query: 220 ASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 +++ L G V VV+ + + +++ M+ S A HA Sbjct: 232 PGELSTALTG-LAVEVVDADSAPAGKKDVLL----MNGASGAAQTAILLMHAA------- 279 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 + R TIV+T SR + E L ++A+ QR +G Sbjct: 280 ---------IHRGLRTIVYTQSRKITE-----LIAMWAS--QR--------------AGD 309 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 +R+ ++ E+R EQ L SGEL VV TS+LELGID+G +DL I Sbjct: 310 LGSRIS--------AYRAGFLPEERQKIEQRLASGELLAVVTTSALELGIDIGNLDLCIL 361 Query: 400 VATPLSVASGLQRIGRAG 417 V P ++ S QR GR G Sbjct: 362 VGYPGTIMSTWQRAGRVG 379 >UniRef50_Q049S7 Lhr-like helicase n=12 Tax=Bacteria RepID=Q049S7_LACDB Length = 744 Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 107/418 (25%), Positives = 171/418 (40%), Gaps = 67/418 (16%) Query: 15 FSPATRDW-FLRAFKQPTAVQPQTWHVAARSEHALVI-APTGSGKTLAAFLYALDRLFRE 72 ++P +D+ + R ++ +Q V ++ L++ A T SGKT AAF L L Sbjct: 7 YAPFIQDYIYSRGWETLRPLQTAAAQVIFDTDDNLLLSASTASGKTEAAFFPILTDLAEN 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + LYI+P+KAL D L+ +G ++ V Sbjct: 67 PAD---------SIACLYIAPLKALINDQYDRLKDICEG------------SDVPVWRYH 105 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKR 189 GD A ++ K+ + P +L TPESL ++ ++ + R + V+IDE+H+ S R Sbjct: 106 GDVSAAQKRKMFKRPQGVLQITPESLESLIINKHADIPRLFGDLRYVVIDELHSFLRSDR 165 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G LERL+ L +RIGLSAT+ FLG P PQ + Sbjct: 166 GGQTFCLLERLNRLAGVKPRRIGLSATIGDPKAAGQFLGDGSGHQTRIPKVKSRPQRWHL 225 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSI------WPYIETGILDEVLRH---RSTIVFTN 300 +M+ G+ S + + P + L + H + +VFTN Sbjct: 226 ----SMEHFYKSGDQAGDHSALPAQAVLDQASDQAPELADPGLAYIFDHTRGKKCLVFTN 281 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SR E + L + + D F+ HHG++S Sbjct: 282 SREECEAVCQVLRQYCEYK-------------------------HEPDRFMI--HHGNLS 314 Query: 361 KEQRAITEQALKSGELR-CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 R E +K + AT++LELGID+G ++ Q+ P +V+ LQR+GR G Sbjct: 315 AALRQGAEAIMKDEDSNITTCATATLELGIDVGQLERAFQIEAPFTVSGFLQRMGRTG 372 >UniRef50_A7AW09 Helicase, putative n=2 Tax=Eukaryota RepID=A7AW09_BABBO Length = 1798 Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 113/429 (26%), Positives = 188/429 (43%), Gaps = 77/429 (17%) Query: 22 WFLRAF---KQPTAVQPQTWHVAAR-SEHALVIAPTGSGKTLAAFLYALDRL--FREGGE 75 W +AF ++ +Q ++ A + S++ L+ APTG GKT A L AL + GGE Sbjct: 158 WAQKAFAGIEKLNTIQSMVYNTAFKTSQNMLISAPTGCGKTNVALLCALQNFESYFNGGE 217 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 K ++++Y++P+KAL ++V K + D + LRV TGDT Sbjct: 218 --------KNTKVVYVAPMKALASEVTGKFS---KSLVD---------LGLRVREVTGDT 257 Query: 136 --PAQERSKLTRNPPDILITTPESL-------YLMLTSRARETLRGVETVIIDEVHAVAG 186 P E + D+LITTPE L Y T L V +IIDEVH + Sbjct: 258 QVPTSELGSI-----DVLITTPEKLDVITRNSYSTGTQSDDSFLTKVSCLIIDEVHLLND 312 Query: 187 SKRGAHLALSLERLDALLHTSAQR---IGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 + RG L + R+ L+ ++ + +G+SAT+ + DVA FL V P H Sbjct: 313 T-RGIVLETVVARILRLIESTQETRRIVGISATLPNWKDVAEFLR-------VAPEHAYH 364 Query: 244 --PQIRIVVPVANMDDVSSVASGT-GEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P+ R V +S V G G+D G+++ I+ + + I+F + Sbjct: 365 FGPEYRHV-------PLSQVFYGVKGKDI----TGTMYEICFDHIIQTLENGKQCIIFVH 413 Query: 301 SRG----LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 SR A KL + E + + P+ + + + + V+ + HH Sbjct: 414 SRNETSMTANKLIEMIQESPSHQKLFQPNRDIYQRFHKQLKKSKHDNVERFAEYCMSIHH 473 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ--------VATPLSVAS 408 + + R + E K G ++ +V+TS+L G+++ A ++I+ V ++ Sbjct: 474 AGMVRRDRDVVENMFKEGLIKVLVSTSTLAWGVNLPANCVIIKGTFIGGLGVDRNINYLE 533 Query: 409 GLQRIGRAG 417 Q +GRAG Sbjct: 534 LTQIMGRAG 542 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 97/436 (22%), Positives = 179/436 (41%), Gaps = 80/436 (18%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P P+ L D F + + P Q ++ ++ LV APTGSGKT+ A L Sbjct: 1028 PMPTKALCDKFD------YQHKYFNPLQTQMLSY-CLYHDDNLLVGAPTGSGKTVVAEL- 1079 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 A+ RL+R + +++YI+P+KAL + + D ++ G + Sbjct: 1080 AMFRLWR----------TQVCKKVVYIAPLKALAYE----------RLKDWNKKFGMFKK 1119 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHA 183 + V TGD+ + + D+++TTPE + + R+ +R V ++IDEVH Sbjct: 1120 VVEV---TGDSRTSVKEIVN---SDVIVTTPEKWDGISRHWKTRKYVRSVGLIVIDEVHL 1173 Query: 184 VAGSKRGAHLALSLERL---DALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + G RGA L + RL ++ + + LS + + ++A ++ PA Sbjct: 1174 L-GESRGAVLEAIVSRLCFISKFTQSNTRLVCLSTALANPGEIADWISVSSTKVFNFSPA 1232 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST---IV 297 +R + + + G ++ R S+ ++RH + +V Sbjct: 1233 VRPVKCHLYI------------DGFPLKAYCPRMNSM----NRPAFSTIMRHDISAPVLV 1276 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS--- 354 F +SR L + R +I + A F ++ +VF+ Sbjct: 1277 FVSSRRQTRTTARDFVSLLQVKSLRWTNIDISARPFID---------ENLNVFVEHGIGI 1327 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI----------QVATPL 404 HH + R E+ GE++ ++AT++L G+++ A +++ + Sbjct: 1328 HHAGLHDSDRIRIEEMYLKGEIKVLIATATLAWGVNLPAKIVIVKGTEYYDGKTKKYADY 1387 Query: 405 SVASGLQRIGRAGHQV 420 SV LQ +GRAG +V Sbjct: 1388 SVTDILQMVGRAGRRV 1403 >UniRef50_B8DQM2 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=B8DQM2_DESVM Length = 1198 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 116/399 (29%), Positives = 167/399 (41%), Gaps = 51/399 (12%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 H +V PT SGKT L L+R + +R LY+ P+KAL D Sbjct: 131 HVVVATPTASGKTYVYNLPVLERFLSD-----------PDARALYLFPLKALAQDQLSTF 179 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 D+ R R I GDT R K+ +NPP +L+T PE L+L + Sbjct: 180 TGLTAAWPDDARPR--------AAIYDGDTTDHFRRKIRQNPPTVLLTNPEMLHLAILPH 231 Query: 166 ARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERL---DALLHTSAQRIGLSATVRS 219 ++ L + +++DEVH G GAH+A RL A + SATV + Sbjct: 232 HQQWTSLLASLAFIVVDEVHTYRGVL-GAHMAQVFRRLLRVCARYGAHPTFVFCSATVGN 290 Query: 220 ASDVAAF---LGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG-TGEDSHA---- 271 ++AA LGGD + + P I +N + +G +G + HA Sbjct: 291 PGELAANLTGLGGDLENKNLVGEGVSFPHTPIPPKFSNEAIHAPHPTGISGHEVHADSAK 350 Query: 272 GREGSIWPYIETG--------ILDEV-----LRHRSTIVFTNSRGLAEKLTARLNELYAA 318 G +G+ P E G ++ E LRH VF N +L A Sbjct: 351 GVKGARPPCGEAGGSASCDINVITESGAPQGLRH---FVFVNPDDSPSTAAIQLLRAALA 407 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 R R+ E S + + I+ G + +E+R I E + G+L Sbjct: 408 RGLRTIVYCQSRRMTELISMWAAEKAGPYRDRISAYRAGFLPEERRDI-EARMAGGDLLA 466 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 V++TS+LELGID+G +DL I V P +V S LQR GR G Sbjct: 467 VISTSALELGIDIGGLDLCILVGYPGTVMSTLQRGGRVG 505 >UniRef50_D1U6T8 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U6T8_9DELT Length = 987 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 133/467 (28%), Positives = 191/467 (40%), Gaps = 86/467 (18%) Query: 32 AVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI 91 A Q Q A H +V PT SGK+L L LD + ++ LY+ Sbjct: 60 AHQAQAVDHARAGHHVVVATPTASGKSLCYNLPVLDHCLAD-----------PEAKALYL 108 Query: 92 SPIKALGTDVQRNLQIPLKGI----ADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 P+KAL D + L G+ D+ RR I GDT R K+ P Sbjct: 109 FPLKALAQDQLKGFN-ELAGLLPVGPDQGGRRPTA------AIYDGDTSPHFRKKIRNAP 161 Query: 148 PDILITTPESLYL-MLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 P ++++ PE ++L ML A E L G+ V++DEVH G G+H+A+ RL L Sbjct: 162 PSVIMSNPEMVHLSMLPHHAAWAEFLSGLSYVVVDEVHTYRGVM-GSHMAMVFRRLLRLC 220 Query: 205 HTSAQR---IGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 R I SAT+ + + L G + V HP + S Sbjct: 221 EYYGARPTFIFCSATIGNPVALCRMLTG---LEV-------HPVLE-----------SGA 259 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 A G EGS + + R TIV+ SR L E L L+AA Sbjct: 260 ARGLRHMLFINPEGSPAQAAIQLLRSALARDMRTIVYCQSRKLTE-----LIALWAA--- 311 Query: 322 RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 SG R+ + G + +E+R I E + SGEL V++ Sbjct: 312 -------------ERSGQYRERISAYRA-------GFLPEERREI-EARMASGELLAVIS 350 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TS+LELGID+G +DL I V P S+ + QR GR G L + D +D Sbjct: 351 TSALELGIDIGGLDLCIMVGYPGSIMATQQRGGRVGRTARDSVVALV---AQEDALDQYF 407 Query: 442 I--VECMFAGRLEN-LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 + E FA E+ + P+NP+ ++ + + AAA L+ E + R Sbjct: 408 MRHPEDFFARPPESAMLNPYNPV-IMDRHLICAAAELTLRRGETFLR 453 >UniRef50_C8WZA3 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfohalobiaceae RepID=C8WZA3_DESRD Length = 962 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 110/378 (29%), Positives = 156/378 (41%), Gaps = 76/378 (20%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 H + PT SGK+L L + L ++ SR L + P+KAL D R L Sbjct: 76 HTAIATPTASGKSLTFALPIAEALCQD-----------PESRALLLYPLKALAQDQLRAL 124 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 Q + E++ R I GDTP ER ++ NPP +L T P+ L+L LT Sbjct: 125 QAFTQPWPLEQQPRA--------AIYDGDTPQAERGRIRANPPHLLCTNPDMLHLGLTPH 176 Query: 166 AR---ETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRS 219 E + VI+DEVH G G+H+A RL + + I SAT+ + Sbjct: 177 HHSWGEFFSRLRFVIVDEVHTYRGVM-GSHMAWVFRRLRRICRYWGSDPTFIFASATIGN 235 Query: 220 ASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 + +A L G PV V + +V +D + Sbjct: 236 PAQLAQNLAG-VPVEAVTENGAAQGKRHMVF----LDALEGAPQTA-------------- 276 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 + + R TIV+T SR E L L+ QRSP A + + S Sbjct: 277 --LGLLQAALARGLRTIVYTQSRKYTELLAMWLS-------QRSPRFADRVSAYRS---- 323 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 G + +E+R I E AL +G L V++TS+LELGID+G +DL + Sbjct: 324 -----------------GFLPEERREI-ETALANGSLLGVISTSALELGIDIGNLDLCLL 365 Query: 400 VATPLSVASGLQRIGRAG 417 V P SV + QR GR G Sbjct: 366 VGYPGSVMATWQRSGRVG 383 >UniRef50_C1XJQ7 Helicase family protein with metal-binding cysteine cluster n=2 Tax=Meiothermus RepID=C1XJQ7_MEIRU Length = 768 Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 129/442 (29%), Positives = 192/442 (43%), Gaps = 87/442 (19%) Query: 29 QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRI 88 QP + Q + + V + +H ++ T SGK+L F + + EG +T+ + Sbjct: 57 QPFSFQAEAFAVIEQGQHLVMATSTASGKSLV-FQAPVLKAVLEG----------QTALL 105 Query: 89 LYISPIKALGTDVQRNLQIPLKGIADERRRRGET-EVNLRVGIRTGDTPAQERSKLTRNP 147 LY P KAL D L R+ G EV R+ GDTP +R K R Sbjct: 106 LY--PTKALAHDQLGRL-----------RQMGRVLEVADRIYAYDGDTPDSQRKK-AREQ 151 Query: 148 PDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL- 203 L+T P+ L+ L R E L + +++DE+HA G G+H AL L+RL L Sbjct: 152 GRALLTNPDMLHFGLLPRHGEWAAFLARLRYIVLDELHAYRGVF-GSHTALILQRLLRLA 210 Query: 204 LHTSA--QRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 H A Q I SAT+ + ++ A L G V + P + + VP A + + Sbjct: 211 WHYGARPQVIAASATIANPAEHAQGLTGLEFVQITASPRGAEREFAVWVPKALDKEGKNR 270 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 S E + R + E G+ T++FTN+R AE L AR YAA Sbjct: 271 RSPNLEAALLARHAA-----EQGL--------RTLIFTNARRTAE-LVAR----YAA--- 309 Query: 322 RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 +RV R + + R EQAL+ G +R +V+ Sbjct: 310 -------------------DDRV--------RPYRAGYTAADRRKLEQALQEGTVRVLVS 342 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TS+LELG+D+G +++V+ + P SV+S QR GRAG G + L R D +D+ Sbjct: 343 TSALELGVDIGGLEVVVLLGYPGSVSSFWQRAGRAGR---GQQRALVLWIPREDPMDAYF 399 Query: 442 --IVECMFAGRLEN-LTPPHNP 460 E + G E+ + P NP Sbjct: 400 EQHPELLLTGAPESAIADPDNP 421 >UniRef50_D2RJD3 DEAD/DEAH box helicase domain protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJD3_ACIFE Length = 757 Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 114/388 (29%), Positives = 167/388 (43%), Gaps = 66/388 (17%) Query: 44 SEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQR 103 E+ L+ A T SGKT AAF L LF + K+ +YI P+KAL D Sbjct: 38 DENLLLTASTASGKTEAAFFPILS-LFAQAPP--------KSVGCIYIGPLKALINDQFL 88 Query: 104 NLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT 163 LQ PL E + V GD ++KL ++P IL TPESL +L Sbjct: 89 RLQ-PLC-----------EEGGIPVWHWHGDVSQSHKAKLLKHPSGILQITPESLEALLL 136 Query: 164 SRARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSA 220 + R + V+IDEVH++ RG ++RL L + +RIGLSAT+ Sbjct: 137 HKHMAIPRLFGDLRFVVIDEVHSLLRGDRGGQTLCLIQRLSRLAGVNPRRIGLSATLGDP 196 Query: 221 SDVAAFL--GGDRPVTV--VNPP------AMRHPQIRIVVPVANMDDVSSVASGTGEDSH 270 V FL G R + V P +M H ++ + D++++ + + Sbjct: 197 EKVGEFLSMGTGRKTLIPQVKAPGTRWRLSMEHFYVKDAQAGEDRTDIAALPALDQKTDQ 256 Query: 271 AGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA 330 A + P + G + E R + +VF NSR E +T L + L P Sbjct: 257 APAQAD--PGL--GYIFEHTRGKKCLVFVNSREECEGVTTSLRQY--CELNHEP------ 304 Query: 331 AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS-GELRCVVATSSLELGI 389 D F+ HHG++S R E+ +K V TS+LELGI Sbjct: 305 -----------------DRFLI--HHGNLSASYRETAEELMKDESRSLTTVTTSTLELGI 345 Query: 390 DMGAVDLVIQVATPLSVASGLQRIGRAG 417 D+G ++ Q+ P +V+S LQR+GR G Sbjct: 346 DIGRLERAFQIDAPWTVSSFLQRMGRTG 373 >UniRef50_A3DPM4 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfurococcaceae RepID=A3DPM4_STAMF Length = 763 Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 108/413 (26%), Positives = 174/413 (42%), Gaps = 83/413 (20%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P PS D+ P R ++ Q + E+ ++ A TG+GKT A L Sbjct: 39 PGPSIEDIDLPEPLLEALKKRGIRRLYRFQYDAYKSILNGENVVITAGTGTGKTEAFLLP 98 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTD-VQRNLQIPLKGIADERRRRGETE 123 L +++ + + + + + P KAL D +QR G+ Sbjct: 99 ILSKIYEK---------RTPNPQAMLVYPTKALARDQLQRINDYLGYGV----------- 138 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY--LMLTSRARETLRGVETVIIDEV 181 + GDTP + R K++ NPPDI++T P+ ++ L+L+ R ++ + ++IDE+ Sbjct: 139 --FSAAVYDGDTPRRIRQKISANPPDIVVTNPDMIHVGLVLSPTIRRFVKASQFMVIDEL 196 Query: 182 HAVAGSKRGAHLALSLERLDALLHTS-AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 H G G+++ ER++ + Q IG SAT+ + + A L G PV V+ P Sbjct: 197 HVYEGV-FGSNVKCVFERINKYRRNNPPQYIGSSATIGNPREHAETLFG-VPVKVIEGPL 254 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST--IVF 298 R +A VS+ G + + T L VL R IVF Sbjct: 255 RRR-------GIAYHVLVSA--------------GKLSRWTVTAALASVLARRGLRFIVF 293 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 +S+ +AE L AR+ + R D+ + H Sbjct: 294 VDSQQMAE-LIARI----------------------------AWRSYGVDIMV---HRAG 321 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ 411 + ++R + E L++GE+ V AT +LELGID+G +D VI A P S A LQ Sbjct: 322 LPADERKMIESKLRAGEISGVAATPTLELGIDIGFLDAVIMAAPPPSFAKYLQ 374 >UniRef50_D2NR92 Distinct helicase family protein n=2 Tax=Rothia mucilaginosa RepID=D2NR92_9MICC Length = 930 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 132/487 (27%), Positives = 204/487 (41%), Gaps = 82/487 (16%) Query: 30 PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG-GED-------TREAH 81 PT + A H +V T SGKTL+ + LD ++R GE +R + Sbjct: 144 PTPAHVEGAKSAGSGGHVIVATGTASGKTLSYLMPTLDAIYRASCGEPVSSTSAYSRAEN 203 Query: 82 KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL---RVGIRTGDTPAQ 138 + +LYISP KAL D L T NL GDTP Sbjct: 204 LNNRANVLYISPAKALSADQLTAL----------------TSYNLPGLHAASYDGDTPTG 247 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLAL 195 ER + R + ++TTP+ L + S R+ LRG+ V++DE H+ G GAH+A Sbjct: 248 ER-RWIREHANFILTTPDMLNYSILSNHRQWASFLRGLRYVVLDEAHSYRGVF-GAHIAN 305 Query: 196 SLERLD---ALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRIV- 249 L RL AL T G SAT + + + L G + VT V + + Sbjct: 306 LLRRLRRVCALYRTVPVFYGASATSSNPVESFSKLIGVPQQAVTAVTESTSARGETTVAL 365 Query: 250 -----VPVANMDDVSSVASGTGEDSHAGREGSIWPY----IETG---ILDEVLRHRSTIV 297 +P D ++ A T + + + P +E G + D VL ++V Sbjct: 366 WEPEFMPPKAHDQLAKGARSTQQQAVQSKAEQEAPRRVSPVEQGAQMLTDLVLSRTRSLV 425 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 F SR R E+ + + QR + + S+RV + + Sbjct: 426 FAGSR--------RSVEILSQKTQR---------YLDEVEAGLSHRVAA--------YRA 460 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 + E+R E+ L++GEL + +TS+LELGID+ +D V+ P + AS +QR+GRAG Sbjct: 461 GYTPEERRELERKLRNGELLGLASTSALELGIDISGLDAVLVAGWPGTRASFMQRVGRAG 520 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVI--VECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 L + +D+ ++ E +F +E + P NP VL+ Q AAA Sbjct: 521 RS---GQDALAVLIADDNPLDTYLVHHPEAIFGQEVEATVFDPTNPY-VLSPQLCAAAQE 576 Query: 475 DALQVDE 481 ++ +E Sbjct: 577 APIRAEE 583 >UniRef50_B8FB49 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB49_DESAA Length = 1002 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 132/477 (27%), Positives = 193/477 (40%), Gaps = 125/477 (26%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93 Q Q + R E+ + PT SGKT L L+ L ++ G AH LY+ P Sbjct: 65 QVQAIDLIRRGENIVAATPTASGKTFMYNLPVLEALAQDPG-----AHA------LYMFP 113 Query: 94 IKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILIT 153 +KAL D + R+ E I GDT + R K+ PP+ + T Sbjct: 114 LKALTQDQIKTF----------RKLAANMENGPTAEIYDGDTTSYRRRKIKEAPPNAIFT 163 Query: 154 TPESLYLMLTSRAR--ETLRG-VETVIIDEVHAVAGSKRGAHLALSLERLDALLH---TS 207 PE L+L E G ++ +I+DEVH G G+H+A RL + + Sbjct: 164 NPEMLHLGFLPYHHNWEGFFGKLKFIIVDEVHTYRGV-MGSHMAWVFARLLRVCRYYGSD 222 Query: 208 AQRIGLSATVRSASDVAAFLGGDRPVTVVN----PPAMRHPQIRIVVPVANMDDVSSVAS 263 Q + SAT+ + D+A L G R +V P RH V M+ + A Sbjct: 223 PQFVMCSATIANPRDLACRLTG-RNFKLVEKSTAPRGARH--------VVFMNPQTGPA- 272 Query: 264 GTGEDSHAGREGSIWPYIETGIL---DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 +T I+ + R TIV+T SR + E ++ +E Sbjct: 273 ------------------QTAIMLLKAALARGLRTIVYTQSRKMTELISMWASE------ 308 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 A F+ I+ G + +E+R I E L SGEL VV Sbjct: 309 --------RAGEFKDK--------------ISAYRAGYLPEERREI-ETKLASGELLAVV 345 Query: 381 ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSA 440 +TS+LELGID+GA+DL I V P +V + QR GR G RDL +SA Sbjct: 346 STSALELGIDIGALDLCILVGYPGTVMATWQRGGRVG----------------RDLSESA 389 Query: 441 VIV---------------ECMFAGRLEN-LTPPHNPLDVLAQQTVAAAAMDALQVDE 481 +++ E F+ +EN + P NP+ + A+ AAA L +D+ Sbjct: 390 MVLIAGEDALDQYFMRNPEDFFSRSVENAVINPLNPV-ISARHIECAAAELPLNLDD 445 >UniRef50_A4FZE4 DEAD/DEAH box helicase domain protein n=4 Tax=Methanococcales RepID=A4FZE4_METM5 Length = 707 Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 97/390 (24%), Positives = 172/390 (44%), Gaps = 59/390 (15%) Query: 43 RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ 102 ++++ LV PT SGKTL + ++ L E E T + ++I P+KAL T+ Sbjct: 30 KTKNFLVCIPTASGKTLIGEMAFINNLLNENKEPT-------GKKAIFIVPLKALATE-- 80 Query: 103 RNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML 162 + ++ + G L++GI GD ++E N D++ITT E L ++ Sbjct: 81 -----KFEEFKEKYEKYG-----LKIGISIGDFDSKE----DLNKYDLIITTSEKLDSLI 126 Query: 163 TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASD 222 + + L+ V V++DE+H + +RGA L + L L L + Q IGLSATV + + Sbjct: 127 RHKI-DWLKDVSCVVVDEIHLIGDGERGATLEVVLTILKTL---NLQIIGLSATVGNPGE 182 Query: 223 VAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 282 +A +L + P +R N+ + ++ E+ H ++ Sbjct: 183 LADWLNAKLIIDTWRPIELRKATF-----FENVIEYTNSEEKKVENEHKNPLNNL----- 232 Query: 283 TGILDEVLRHRSTIVFTNSR----GLAEKLTARLNELYAARLQRSPSIAVDAAHFES--- 335 ++D S ++F +S+ G A+K R L+ +++ +A D +S Sbjct: 233 --VIDTAKEEGSCLIFCSSKRNAVGEAKKHDVR-KYLHPLEIEKLNEVAEDLLESDSEGK 289 Query: 336 TSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVD 395 T S+ V+ F HH ++ +QR I E A K+ ++ + T +L G+++ Sbjct: 290 TVKTLSDCVRKGIAF----HHAGLTTKQRKIVETAYKNRIVKVICCTPTLSAGLNLPCRR 345 Query: 396 LVIQVATPLS--------VASGLQRIGRAG 417 +I+ S V Q IGRAG Sbjct: 346 AIIRDVKRFSEKGMKFIPVMEIQQCIGRAG 375 >UniRef50_P51979 ATP-dependent DNA helicase MER3 n=8 Tax=Saccharomycetaceae RepID=HFM1_YEAST Length = 1187 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 111/431 (25%), Positives = 199/431 (46%), Gaps = 80/431 (18%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTW-HVAARSEHALVIAPTGSGKTLAAFLYAL 66 +++LPD F R F F + +Q + + + +E+ ++ +PTGSGKT+ F A+ Sbjct: 123 TTILPDSF----RGVF--KFTEFNKMQSEAFPSIYESNENCIISSPTGSGKTV-LFELAI 175 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 RL +E DT ++I+YI+P K+L ++ +N P + VNL Sbjct: 176 LRLIKETNSDTN------NTKIIYIAPTKSLCYEMYKNW-FP-------------SFVNL 215 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHA 183 VG+ T DT E K + +I+ITTPE + +LT R + R V+ V++DE+H Sbjct: 216 SVGMLTSDTSFLETEKAKK--CNIIITTPEK-WDLLTRRWSDYSRLFELVKLVLVDEIHT 272 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--GGDRPVTVVN-PPA 240 + KRGA L + L R++ + + + + LSATV + D+A +L + P +++ + Sbjct: 273 IK-EKRGASLEVILTRMNTMCQ-NIRFVALSATVPNIEDLALWLKTNNELPANILSFDES 330 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 R Q+ V + + + ++ +I+ I+++ +R ++F Sbjct: 331 YRQVQLTKFVYGYSFNCKNDF-----------QKDAIYNSKLIEIIEKHADNRPVLIFCP 379 Query: 301 SRGLAEKLTARL---NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 +R + TA+ N +++ +R D E +Q F HH Sbjct: 380 TRA-STISTAKFLLNNHIFSKSKKRCNHNPSDKILNEC--------MQQGIAF----HHA 426 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV-----------IQVATPLSV 406 +S E R E+ +G + + +TS+L +G+++ A ++ IQ + L V Sbjct: 427 GISLEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQEYSDLDV 486 Query: 407 ASGLQRIGRAG 417 LQ IGRAG Sbjct: 487 ---LQMIGRAG 494 >UniRef50_B5CL83 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CL83_9FIRM Length = 910 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/528 (25%), Positives = 216/528 (40%), Gaps = 82/528 (15%) Query: 11 LPDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 P+ P D+ + + + Q + + A E ++ T SGKTL+ L L ++ Sbjct: 25 FPESMRPEIGDYLRSQGISRLYSHQAEMFVRAGEGESLVITTATASGKTLSFLLPVLQQI 84 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + +R ++I P KAL +D R L L+ + R + G Sbjct: 85 L-----------ENPLTRAIFIYPTKALASDQYRVLAPVLEYFGEGR---------ISAG 124 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-----TLRGVETVIIDEVHAV 184 + GDT ERS++ R +I++T PE L + + ++IDE+H+ Sbjct: 125 VYDGDTMPAERSRV-RKSANIILTNPEMLNAAFLPNHSKYGFDFIFANLNYIVIDELHSY 183 Query: 185 AGSKRGAHLA---LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 G+ G HLA ++R+ H+ Q + SAT+ + ++A + G P + + Sbjct: 184 RGA-FGGHLANIFRRMKRICGYYHSDPQFLCSSATIANPVELAEKICGITPGLIERDGSP 242 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 ++ ++ + + G S +E I +E G +VFT+S Sbjct: 243 APEKVYKILQPPEIKGANDKVYGRYSASSVVKE-LIPKLVEKG--------EQFLVFTHS 293 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R E + L+ S DA F G T IA G Sbjct: 294 RRAVEVI-----------LKESRDRLEDAG-FLGEKGQTDK--------IAGYRGGYTPL 333 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 E+R I E+ + +GEL ++ T++LELGID+G +D + V P + AS Q+ GRAG Sbjct: 334 ERREI-ERKMMAGELTGLICTNALELGIDIGKLDCTVLVGYPGTRASFWQQTGRAGRCGR 392 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLAQQTVAAAAMDALQVD 480 L D A+ + +F GR EN + P N L LA AAA M L +D Sbjct: 393 RCVNYLILENQPFDQY-IAISPDWLFEGRSENAIVDPDNLLIELAHIRAAAAEM-PLSLD 450 Query: 481 EWYSRVRRAAPWKDL----PRRVFDATLDMLSGR-------YPSGDFS 517 + A + DL P + L L+GR +P+GD+S Sbjct: 451 D-------VALFPDLGEIIPVLLNAQELKSLAGRFSWAGPAFPAGDYS 491 >UniRef50_B6YXM0 DNA helicase n=5 Tax=Thermococcus RepID=B6YXM0_THEON Length = 726 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 108/412 (26%), Positives = 176/412 (42%), Gaps = 71/412 (17%) Query: 48 LVIA-PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQ 106 LV+A PT SGKTL + + +++L REGG + +Y+ P+KAL + R + Sbjct: 42 LVLAIPTASGKTLVSEIVMVNKLLREGG------------KAVYLVPLKALAEEKYREFK 89 Query: 107 IPLKGIADERRRRGETEV-NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR 165 E EV LRV TGD + + L R DI++ T E + L Sbjct: 90 --------------EWEVLGLRVAATTGDYDSTDEW-LGRY--DIIVATAEK-FDSLLRH 131 Query: 166 ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAA 225 ++ V+ V+ DEVH + RGA L + L + AQ + LSATV +A ++A Sbjct: 132 GSSWIKDVKLVVADEVHLIGSYDRGATLEMILSHMLG----RAQILALSATVGNAEELAE 187 Query: 226 FLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI 285 +L + V+ P +R V + ED R + W ++ Sbjct: 188 WLNAELVVSNWRPVQLRK-------------GVFAQGELFWEDGKIDRYPANW---DSLA 231 Query: 286 LDEVLRHRSTIVFTNSRGLAEK----LTARLNELYAARLQRSPSIAVDAAHFESTSGATS 341 +D V R + ++F N+R AEK L ++ L QR D+ T+ Sbjct: 232 IDAVKRGKQALIFVNTRRSAEKEAVSLAPKIARLLTKPEQRGLKELADSLESNPTNEKLK 291 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 ++ F HH +S+ +R + E A + G ++ + AT +L G+++ A ++I+ Sbjct: 292 KALRGGVAF----HHAGLSRTERTMIEDAFREGLIKVITATPTLSAGLNLPAFRVIIRDT 347 Query: 402 TPLS--------VASGLQRIGRAGH-QVGGVSKGLFFPRTR--RDLVDSAVI 442 S V Q +GRAG + V + + RT + L+D V Sbjct: 348 KRYSNFGWVDIPVLEIQQMMGRAGRPKYDKVGEAIIVARTEDPKKLMDRYVF 399 >UniRef50_D0NDF2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDF2_PHYIN Length = 2164 Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 117/439 (26%), Positives = 200/439 (45%), Gaps = 52/439 (11%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAF 62 +P P L D P + ++ F+ +Q Q +H + ++ + L+ APTGSGKT+ A Sbjct: 1272 HPQPLQSLDD---PVYQALYVGKFQYFNPIQTQAFHQLYHQNGNVLLCAPTGSGKTVCAE 1328 Query: 63 LYALDRLFREGGEDTREAHKRKT-SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 L A+ R++++ E ++ + +R S I+YI+P+KAL + E + R E Sbjct: 1329 L-AMLRVWKQLQESSQGSARRTCQSLIVYIAPMKALAREK-----------VAEWKTRFE 1376 Query: 122 TEVNLRVGIR--TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVI 177 LR + TGDT LT+ DI++TTPE L+ S + R + + V+ Sbjct: 1377 NNPQLRKKVVEVTGDTLVNVDFILTK--ADIVVTTPEKWDLLTRSSSIGRALMTQMALVV 1434 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTS--AQRIGLSATVRSASDVAAFLGGDRPVTV 235 +DEVH V + RGA L + + RL + + IGLS + +A DV +LGG Sbjct: 1435 VDEVHLVGEAPRGAVLEVLISRLRRFQRSGPPIRVIGLSTALANAGDVGRWLGGITSSHA 1494 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI----WPYIETGILDEVLR 291 NP + R V MD G E + R ++ + I+T D Sbjct: 1495 KNPDVGQVYNFRASVRPVPMD---VHIQGFPERHYVARMAAMNKPTFMAIKTHSPD---- 1547 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS---NRVQSSD 348 + +VF +S+ + L + A + +D A +S ++ ++ + Sbjct: 1548 -KPVLVFVSSKAQTKLTALDLIQFCVADDGDKRFLKMDEAVMDSICQSSQIGDETLKHTL 1606 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ--------- 399 F HH +++ RA+ E+ + ++ V++TS+L G+++ A +V++ Sbjct: 1607 SFGIGLHHAGLARRDRALVEKLYRDRLIQVVISTSTLAWGVNLPAHLVVVKGTEYFQNGR 1666 Query: 400 -VATPLSVASGLQRIGRAG 417 + PLS LQ IGRAG Sbjct: 1667 YRSYPLS--DLLQMIGRAG 1683 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 26/202 (12%) Query: 33 VQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI 91 +Q + ++ A S ++ LV APTG+GKT A L L + + ++ +H +I+Y+ Sbjct: 363 LQSKLFNAAYTSNQNLLVCAPTGAGKTNVAMLTILQEVKTQLSRES--SHGVANMKIIYV 420 Query: 92 SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDIL 151 +P+KAL +V LK + L+V TGD + +K ++ Sbjct: 421 APMKALAQEVVTKFGQRLKAL------------KLKVRELTGD---MQLTKKEIEETHVI 465 Query: 152 ITTPESLYLML--TSRARETLRGVETVIIDEVHAVAGSKRG----AHLALSLERLDALLH 205 +TTPE ++ +S + L V+ +IIDEVH +A +RG +A +L R+++ Sbjct: 466 VTTPEKWDVITRKSSTQQSLLSQVKLLIIDEVHLLA-DERGPVIETIVARTLRRVES-TQ 523 Query: 206 TSAQRIGLSATVRSASDVAAFL 227 + + +GLSAT+ + DVA+FL Sbjct: 524 SMIRIVGLSATLPNYVDVASFL 545 >UniRef50_Q05549 Putative ATP-dependent helicase HRQ1 n=12 Tax=Saccharomycetaceae RepID=HRQ1_YEAST Length = 1077 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 99/386 (25%), Positives = 165/386 (42%), Gaps = 70/386 (18%) Query: 43 RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ 102 + E+ ++ T SGK+L L A+D L ++ S +YI P KAL D + Sbjct: 304 QGENVIITTSTSSGKSLIYQLAAIDLLLKD-----------PESTFMYIFPTKALAQDQK 352 Query: 103 RNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL-M 161 R ++ L I + + N V GDT +ER+ + +N ++ T P+ ++ + Sbjct: 353 RAFKVILSKIPELK--------NAVVDTYDGDTEPEERAYIRKN-ARVIFTNPDMIHTSI 403 Query: 162 LTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGL-----S 214 L + A R L ++ V++DE+H G G+H+AL + RL L H + GL S Sbjct: 404 LPNHANWRHFLYHLKLVVVDELHIYKGL-FGSHVALVMRRLLRLCHCFYENSGLQFISCS 462 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 AT++S + G VT+++ S TG Sbjct: 463 ATLKSPVQHMKDMFGINEVTLIHED----------------------GSPTGAKHLVVWN 500 Query: 275 GSIWPYIE---TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA 331 I P E + E + ++ N R +A R+ EL ++ +I ++ Sbjct: 501 PPILPQHERKRENFIRESAKILVQLILNNVRTIAFCYVRRVCELLMKEVR---NIFIETG 557 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 + + S R G S R E+ + G L+ V++T++LELGID+ Sbjct: 558 REDLVTEVMSYR-------------GGYSASDRRKIEREMFHGNLKAVISTNALELGIDI 604 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAG 417 G +D V+ PLS+A+ Q+ GRAG Sbjct: 605 GGLDAVLMCGFPLSMANFHQQSGRAG 630 >UniRef50_Q6C5S5 YALI0E15576p n=1 Tax=Yarrowia lipolytica RepID=Q6C5S5_YARLI Length = 1029 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 105/409 (25%), Positives = 179/409 (43%), Gaps = 82/409 (20%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93 Q + R ++ +V PT SGK+L L+ L +SR L+I P Sbjct: 275 QADALNALYRGQNVVVCTPTSSGKSLIYQTPVLESLL-----------NNDSSRALFIFP 323 Query: 94 IKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR-------TGDTPAQERSKLTRN 146 KAL D +R+L TE++L +G+ GDTP ++R ++ R+ Sbjct: 324 TKALAQDQKRSL----------------TELSLALGLDYGTVETFDGDTPFEKRCEI-RD 366 Query: 147 PPDILITTPESLYLMLT-------SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLER 199 ++ T P+ +++ + S R+ ++ + V++DE+H S G H++L L R Sbjct: 367 RARVVFTNPDMMHVSILPKLDADRSSWRQFIQNLRYVVVDEIH-YYNSLFGTHVSLILRR 425 Query: 200 L----DALLHTSAQRIGLSATVRSA-SDVAAFLGGDR-PVTVVNPPAMRHPQIRIVVPVA 253 L L + Q I SAT+ S + ++ G D +T+V+ P H + Sbjct: 426 LRRVCKLLGNNVVQFISCSATINSPLTHMSNLFGLDEGSITLVDSPGGAHGLKHFL--AW 483 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 N +S +G S G S+ ++ V + TIVF R + E++ + Sbjct: 484 NTPYISPTDPRSGRVSVVGEAISLLAHM-------VKENVRTIVFCRVRVICEQIIKGVR 536 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 + + + P + SN V S+ G S + R EQ + + Sbjct: 537 QKFVD--EGRPDL--------------SNLVM--------SYRGGYSPQDRRKIEQDMFA 572 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 G L +VAT++LELGID+G +D+ I P++V++ Q+ GRAG + G Sbjct: 573 GCLVGIVATNALELGIDIGQLDVCIVAGFPMTVSNLRQQSGRAGRRKDG 621 >UniRef50_Q017R5 Putative ATP-dependent RNA helicase (ISS) (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q017R5_OSTTA Length = 1194 Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 113/411 (27%), Positives = 183/411 (44%), Gaps = 60/411 (14%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 +H +V + T SGK++ + +D L + + LY+ P KAL D R Sbjct: 464 KHVIVSSGTASGKSVCYNVPVVDTLLAD-----------PNATALYMFPTKALAQDQLRA 512 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 L+I L + E +GI GD ++E R+ ++IT P+ L++ + Sbjct: 513 LRIILANVPKSE------ETVFGIGIYDGDVRSKEARAEVRSSDRLIITNPDMLHVSILP 566 Query: 165 RARETLR---GVETVIIDEVHAVAGSKRGAHLALSLERL----DALLHTSAQRIGLSATV 217 ++ +R G+ VIIDE HA +G G+H+AL + RL L +S Q I SATV Sbjct: 567 SHKQWVRFLSGLRYVIIDEAHAYSGVF-GSHVALIVRRLRRLCSELYGSSPQFIISSATV 625 Query: 218 RS----ASDVAAFLG----GDRPVTVVNP-------------PAMRHPQIRIVVPVANMD 256 + A D+ F G D TV N PA++ Q Sbjct: 626 ANPLDHARDLIGFHGVRPDEDTIETVTNDGAPRGVKTFLLWNPALKPGQSHQTNTERKFR 685 Query: 257 DVSSVASGTGEDSHAGREGS----IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 V+S+ G + RE S + +E I+ +V R++ V S+ LAE + L Sbjct: 686 RVTSIERGKAALAKKLRETSTLVDVPAEVEDIIVADVEGARTSPVVEISQILAECVQHNL 745 Query: 313 NELYAARLQRSPSIAVDAAH--FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L + ++ + + S++ +++V S + G +R + E+ Sbjct: 746 RCLAFCKTRKLCELVLVYTREILRSSAPHLADKVAS--------YRGGYEAGERRVIEKE 797 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 L SG L V T++LELGID+G++D+ + + P SVAS Q+ GRAG + G Sbjct: 798 LFSGVLLGVATTNALELGIDVGSLDVTLHLGFPGSVASLWQQAGRAGRREG 848 >UniRef50_A7BAC7 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAC7_9ACTO Length = 859 Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 127/449 (28%), Positives = 192/449 (42%), Gaps = 84/449 (18%) Query: 12 PDVFSPATRD-WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 P SPA D W R + P Q + ++ TGSGK+LAA+ L L Sbjct: 25 PQWVSPAVVDAWARRGVEHPWIHQREALDAVREGLDPVLATGTGSGKSLAAWTPILSDLV 84 Query: 71 R-EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLK------------------G 111 E H+R T+ LY++P KAL D +L L Sbjct: 85 EAEDSSRISAIHRRPTA--LYLAPTKALAADQLASLMSLLGQDGKSADAQASAGAEGSPS 142 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL-YLMLTSRARET- 169 + DER RR +R GDTP +E + R D++++ P+ L Y+ML S R + Sbjct: 143 LVDERLRR------VRATTVDGDTP-REAKEWARAGADLILSNPDFLHYVMLPSHQRWSR 195 Query: 170 -LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAA 225 L + ++IDE H G G+H+AL + RL + H + + LSATVR A+ V Sbjct: 196 FLASLRLIVIDEAHHWRGVT-GSHIALVVRRLLRVAHHLGADPRVVMLSATVRDAAAVGH 254 Query: 226 FLGGDRPVTVV--NPPAMRHP----QIRIVVPVANMDDVSSVAS-----GTGE------D 268 L G V + PA H Q I+ + +D S + + GT Sbjct: 255 ALTGRDAVAITEDGSPAGAHELVLWQGAIMADESEVDISSFLEALDAPPGTATLKVPIVR 314 Query: 269 SHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV 328 AG E + + T ++E R + F SR AE + A++ + +AR Sbjct: 315 RSAGVEAA---NLATAFVEEGAR---LLAFVRSRAGAEAVAAQVRDRLSAR--------- 359 Query: 329 DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 A + RV ++ G E+R E+A+++G +R + TS+LE+G Sbjct: 360 --------GSANAGRVG--------AYRGGYLPEERRALEEAIRTGGVRALATTSALEMG 403 Query: 389 IDMGAVDLVIQVATPLSVASGLQRIGRAG 417 +D+ +D I V P + AS Q+IGRAG Sbjct: 404 LDISGLDATITVGWPGTRASLRQQIGRAG 432 >UniRef50_B8J202 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio RepID=B8J202_DESDA Length = 1086 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 121/403 (30%), Positives = 176/403 (43%), Gaps = 79/403 (19%) Query: 43 RSEHALVIA-PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDV 101 R+ H++V A PT SGK+L L L+R R+ +R LY+ P+KAL D Sbjct: 68 RAGHSIVAATPTASGKSLIYNLPVLERHLRD-----------PDARALYLFPLKALAQDQ 116 Query: 102 QRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM 161 + R + GDT R K+ R+PP +LI+ PE L+L Sbjct: 117 LAAFNALTAAWPKDARPA--------AALYDGDTTDHFRRKIRRDPPAVLISNPEMLHLG 168 Query: 162 LTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIG------ 212 + + L G+ V++DE H G GAH+A RL+ L A R G Sbjct: 169 ILPHHEQWAAFLAGLTHVVVDEAHTYRGVF-GAHMAQVFRRLNRL----AGRYGANPVYV 223 Query: 213 -LSATVRSASDV-AAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSH 270 +ATV + ++ AA G P T + RHP+ S V SGT + Sbjct: 224 LCTATVGNPGELGAALTGAAWPGTGDS----RHPE-------------SPVPSGTDAAAT 266 Query: 271 AGRE-GSIWPYIETGILDEVLRHRS-------TIVFTNSRGLAEKLTARLNELYAARLQ- 321 E G +P + V+ RS VF N TA ++ L AA + Sbjct: 267 QTVEAGGFFPQQPAALPPPVVIDRSGAPQGPRHFVFLNPE--QSPATAAIDLLKAALARN 324 Query: 322 -------RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 RS + + + SG+ S+R+ + G + +E+R+I E + SG Sbjct: 325 LRTIVYCRSRRMTELISLWAGQSGSFSSRISAYRA-------GFLPEERRSI-ESRMASG 376 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 EL VV+TS+LELGID+G +D+ I V P +V + LQR GR G Sbjct: 377 ELLAVVSTSALELGIDIGGLDVCILVGYPGTVMATLQRGGRVG 419 >UniRef50_D1H2W4 Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=4 Tax=Embryophyta RepID=D1H2W4_VITVI Length = 1188 Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 105/401 (26%), Positives = 174/401 (43%), Gaps = 67/401 (16%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93 Q ++ + ++ +V T SGK+L + L+ L + S LY+ P Sbjct: 430 QAESIQASLGGKNVVVATMTSSGKSLCYNVPVLEVL-----------SQNLLSCALYLFP 478 Query: 94 IKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILIT 153 KAL D R L KG ++V+L++G+ GDT ++R L R+ +LIT Sbjct: 479 TKALAQDQLRALLAMTKG----------SDVSLKMGVYDGDTSEEDRMWL-RDNARLLIT 527 Query: 154 TPESLYLML---TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH----T 206 P+ L++ + + R L + VIIDE HA G+ G H A L RL L H + Sbjct: 528 NPDMLHMSILPFHGQFRRILSNLRFVIIDEAHAYKGA-FGCHTAFILRRLRRLCHHVYGS 586 Query: 207 SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP---------AMRHPQIRIVVPVANMDD 257 I +AT + D A L + +++ A+ +P + Sbjct: 587 DPSFIFCTATSANPRDHAMELANLPTLELIHNDGSPSGPKFFALWNPALCSKTVSKRSTS 646 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH-RSTIVFTNSRGLAEKLTARLNELY 316 ++++ E+ R IW + + E+++H I F SR L E + + E+ Sbjct: 647 STNISKSADENVIVKRSSPIWEI--SCLFAEMIQHGLRCIAFCKSRKLCELVLSYTREI- 703 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 LQ + VD+ I G V++++R I E SG+L Sbjct: 704 ---LQETAPHLVDS--------------------ICAYRAGYVAQDRRRI-ESDFFSGKL 739 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 + AT++LELGID+G +D+ + + P S+AS Q+ GR+G Sbjct: 740 CGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSG 780 >UniRef50_B2V5V1 DEAD/DEAH box helicase domain protein n=3 Tax=Sulfurihydrogenibium RepID=B2V5V1_SULSY Length = 803 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 100/380 (26%), Positives = 165/380 (43%), Gaps = 81/380 (21%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107 +V PT SGK+L L L+++ T+ IL I P+ AL D + ++ Sbjct: 55 IVTTPTASGKSLIYTLSILEKI----------DQNPDTTAIL-IFPLVALARDQKEKIEN 103 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA- 166 +K T++ V GDT ER+++ NPP+ LITTP+ L + Sbjct: 104 LIKM----------TKIKATVETYYGDTSNTERARIRSNPPNFLITTPDMLNQGILPNHW 153 Query: 167 --RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL--LHTSAQ--RIGLSATVRSA 220 + +E V++DE+HA G G+H+A RL+ L +T + I SAT+R+ Sbjct: 154 SWDKFFTNLEFVVVDEIHAYRGV-LGSHVANIFRRLNRLANFYTGKEPLYICNSATIRNP 212 Query: 221 SDVAAFLGGDRPVTVVNPPAMRHPQ--IRIVVPVANMDDVSSVASGTGEDSHAGREGSIW 278 S A L G + ++ P+ I I P +N + + Sbjct: 213 SLFAEKLTGKKNFIEISKSGAPSPKKLIYIAEPASNYQLIEIIIE--------------- 257 Query: 279 PYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL-NELYAARLQRSPSIAVDAAHFESTS 337 +++TG STIVF +SR E + + EL +L + Sbjct: 258 -FLKTG--------TSTIVFIDSRKDIEVIYLNIRKELIKRKLFQ--------------- 293 Query: 338 GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 N+V + + +E+R E+ L +G++ V++TS+LE+GID+G + V Sbjct: 294 --LINKV--------KPYRSGYRQEERREIEKGLANGDITVVLSTSALEMGIDIGEIQCV 343 Query: 398 IQVATPLSVASGLQRIGRAG 417 + P ++A+ QR GRAG Sbjct: 344 VLKGFPGTLAAMWQRFGRAG 363 >UniRef50_Q74ZT5 AGR113Wp n=3 Tax=cellular organisms RepID=Q74ZT5_ASHGO Length = 2154 Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 117/443 (26%), Positives = 190/443 (42%), Gaps = 68/443 (15%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTA-------VQPQTWHVA-ARSEHALVIAPTGSG 56 P P P V + DW ++F PTA +Q + + +A ++ L+ APTG+G Sbjct: 472 PKPVDNFPLVSISSLVDWAQKSF--PTAETKTLNRIQSEVYPIAFGTDKNMLLCAPTGAG 529 Query: 57 KTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER 116 KT A L L L + +T+ + K +++YI+P+KAL + R Q Sbjct: 530 KTNVAVLAILRLLSKYYKAETKSFNTSKF-KVVYIAPLKALVQEQVREFQ---------- 578 Query: 117 RRRGETEVNLRVGIRTGDTPAQERSKLTRN---PPDILITTPESLYLML-TSRARETLRG 172 R + L+V TGD S LTR IL++TPE ++ R + Sbjct: 579 --RRLQQYGLKVAELTGD------SNLTRQQIMEAQILVSTPEKWDVITRNGLNRHYTKL 630 Query: 173 VETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP 232 V+ +IIDEVH + +RG + + RL+ T + + LSAT+ + +D+A FL Sbjct: 631 VQLLIIDEVHLL-HDERGPVIESIVARLETQGSTETRVVALSATLPNYTDIAEFLRVPSD 689 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + R P+A G E + R ++ +L+ V + Sbjct: 690 GLFYFDASFR------PCPLAQQ------FCGITETNSVKRVNAMNQVCYEKVLESVAEN 737 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV----DAAHFESTSGATSNRVQSSD 348 IVF +SR K TAR +L I+ DA E T N S Sbjct: 738 HQVIVFVHSR----KDTARTAIWLRDKLLEEDKISSFAPQDAGSAEILKRETENITDKSF 793 Query: 349 VFIARS----HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVA 401 + + HH +S++ R++ E G ++ +V+TS+L G+++ A ++I ++ Sbjct: 794 GDVVQHGFGIHHAGLSRDDRSLAEDLFADGLIKVLVSTSTLAWGVNLPAHTVIIKGTEMY 853 Query: 402 TP-------LSVASGLQRIGRAG 417 +P LS LQ +GRAG Sbjct: 854 SPQKGSWVSLSSQEVLQMLGRAG 876 >UniRef50_B9WA22 Putative uncharacterized protein n=5 Tax=Saccharomycetales RepID=B9WA22_CANDC Length = 1123 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 111/416 (26%), Positives = 181/416 (43%), Gaps = 80/416 (19%) Query: 32 AVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI 91 A+ +T H +V T SGK+L + L+ + D K + S +I Sbjct: 303 AIALETLLSPENKSHVIVSTSTASGKSLIYQIPVLNSILW----DIASGLKGRHSTAFFI 358 Query: 92 SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDIL 151 P KAL D R+ + L + R + V GDTP +ER K+++ DI+ Sbjct: 359 FPTKALAQDQIRHFREFLTHLPTTSSRP------IIVNTYDGDTPFKERDKISKES-DII 411 Query: 152 ITTPESLYLMLT-----SRARETLRGVETVIIDEVHAVAGSKRGAHLAL---SLERLDAL 203 T P++++ + + +E L ++ V++DE+H G+ G ++ L R+ L Sbjct: 412 FTNPDTIHASILPNHSFNNWKEFLSALKFVVMDELHVYKGT-FGVNVGFVMGRLSRIKDL 470 Query: 204 L--HTSAQRIGLSATVRS------------ASDVAAFLGGD------RPVTVVNPPAMRH 243 L S Q I SAT+++ +D + D + + V NPP + + Sbjct: 471 LSRDDSIQYISCSATIQNPVSHFKTVCSLPENDSIVHVDKDGSPCCEKKLIVWNPPPLMN 530 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS--TIVFTNS 301 + D++ D + R G I + +++ V + S IVF Sbjct: 531 QR-------GQKKDIT--------DKYIPRVGMISESAKL-LVNLVTANDSLKIIVFCPI 574 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R + E L + L LQ S F++ SG T SD+ R G SK Sbjct: 575 RVVCEMLMKEVRHL----LQNS---------FKN-SGITQ-----SDIMAYR---GGYSK 612 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 R I EQ + +G+LR +VAT++LELGID+ +D+VI P+S ++ Q+ GRAG Sbjct: 613 TDRRIIEQKMFNGQLRAIVATNALELGIDLSHLDVVITCGFPMSKSNLHQQFGRAG 668 >UniRef50_Q2GRG2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GRG2_CHAGB Length = 1300 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 123/454 (27%), Positives = 185/454 (40%), Gaps = 91/454 (20%) Query: 5 PDPSSLL-PDVFSPATRDWFLRAFKQP--------------TAVQPQTWHVAARSEHALV 49 P PSS P + +P D L + +Q AVQ +++H + +V Sbjct: 33 PTPSSQTDPRIETPVVHDIPLVSLRQALPDKFRAIFPYELFNAVQSKSFHTIYHTNDNVV 92 Query: 50 IA-PTGSGKT----LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 IA PTGSGKT LA ALDR G E+ + I+Y +P KAL ++ R Sbjct: 93 IAAPTGSGKTAILELAICKLALDR----GNENFK---------IVYQAPTKALCSEKAR- 138 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 D ++ G +NL+ TGDT E ++ I++TTPE + +T Sbjct: 139 ---------DWEKKFGH--MNLKCAELTGDTSQAEMRRV--GDASIIVTTPEK-WDSITR 184 Query: 165 R---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221 + R L+ VE +IDEVH + RGA L + R+ + + + I LSATV ++ Sbjct: 185 KWQDHRRLLQMVELFLIDEVH-ILKDVRGATLEAVVSRMKTI-GANVRFIALSATVPNSD 242 Query: 222 DVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYI 281 D+A +LG R T PA R PV + G G +S+ Sbjct: 243 DIARWLG--RNHTTQQLPAHRETFGEEFRPVK----LQKFVHGFGSNSNDFIFDKFLDQK 296 Query: 282 ETGILDEVLRHRSTIVFTNSRGLAEKLTARL----------NELYAARLQRSPSIAVDAA 331 G++ + R + +VF +R E A L N+++ QR P + Sbjct: 297 LPGLISKYARGKPILVFCFTRKSCESTAAMLADFASDRPDGNDMWPVPTQRVPVV----- 351 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 S +Q F HH + + RA EQ G+L + TS+L +GI++ Sbjct: 352 ---------SRELQEIVRFGVAFHHAGLDPQDRATIEQNFLKGQLGVICCTSTLAVGINL 402 Query: 392 --------GAVDLVIQVATPLSVASGLQRIGRAG 417 G V S +Q +GRAG Sbjct: 403 PCHTVVLKGTVGFADDQLKEYSDLEVMQMLGRAG 436 >UniRef50_O73946 Putative ski2-type helicase n=3 Tax=Pyrococcus RepID=HELS_PYRFU Length = 720 Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 95/382 (24%), Positives = 167/382 (43%), Gaps = 60/382 (15%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 ++AL+ PT SGKTL A + + R+ +GG + +YI P+KAL + + Sbjct: 40 KNALISIPTASGKTLIAEIAMVHRILTQGG------------KAVYIVPLKALAEEKFQE 87 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 Q ++ LRV + TGD +++ DI+I T E + L Sbjct: 88 FQ-------------DWEKIGLRVAMATGDYDSKDE---WLGKYDIIIATAEK-FDSLLR 130 Query: 165 RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVA 224 ++ V+ ++ DE+H + RGA +LE + A + AQ IGLSAT+ + ++A Sbjct: 131 HGSSWIKDVKILVADEIHLIGSRDRGA----TLEVILAHMLGKAQIIGLSATIGNPEELA 186 Query: 225 AFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETG 284 +L + V+ P +R V T ED R S W E Sbjct: 187 EWLNAELIVSDWRPVKLRR-------------GVFYQGFVTWEDGSIDRFSS-W---EEL 229 Query: 285 ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRV 344 + D + + + ++F N R AE++ L++ + L + A++ T+ ++ Sbjct: 230 VYDAIRKKKGALIFVNMRRKAERVALELSKKVKSLLTKPEIRALNELADSLEENPTNEKL 289 Query: 345 QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPL 404 + HH + +++R + E+ + G ++ VVAT +L GI+ A ++I+ Sbjct: 290 AKAIRGGVAFHHAGLGRDERVLVEENFRKGIIKAVVATPTLSAGINTPAFRVIIRDIWRY 349 Query: 405 SVASGLQRI---------GRAG 417 S G++RI GRAG Sbjct: 350 S-DFGMERIPIIEVHQMLGRAG 370 >UniRef50_A9A2H7 DEAD/DEAH box helicase domain protein n=2 Tax=Thaumarchaeota RepID=A9A2H7_NITMS Length = 815 Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 92/394 (23%), Positives = 158/394 (40%), Gaps = 79/394 (20%) Query: 28 KQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSR 87 KQ Q + A E+ ++ APT SGKT A + + R+ ++ E A Sbjct: 117 KQFYKFQEEAISEIAYGENVVIEAPTASGKTEAFLIPVIQRIKKDSSEGNVFA------- 169 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 +++ P KAL D Q P + ++ ++ +RV + GDT +R ++ NP Sbjct: 170 -IFVYPTKALARD-----QFP-------KIKKFVEKIGVRVEVFDGDTKQNDRREIIDNP 216 Query: 148 PDILITTPESLYLML--TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 P IL+T + L+ + ++ L ++ DE H +G G+++ ++RL + Sbjct: 217 PQILVTNFDVLHYHMWHQTKFSSLLTTTRIIVTDEAHVYSGI-FGSNVHYIIKRLKRVCT 275 Query: 206 TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT 265 Q + SAT+ A + L G++ M+ Q G+ Sbjct: 276 NKLQFVAASATLEDAKEFCEKLFGEK---------MQKIQ------------------GS 308 Query: 266 GEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS 325 G+ ++P + T R L +LT +L E + + Sbjct: 309 GKKGQTDF-AMLFPSLRT-----------------QRALMVELTKKLTE------KNHKT 344 Query: 326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSL 385 + + +H S A + Q ++ + H + R E+ K L + T +L Sbjct: 345 MVFNNSHLNSELLAIQAKKQKVNI---KVHRAGLMANYRTFVEKQFKDDLLDAISCTPTL 401 Query: 386 ELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 ELGID+G VD VI P V +QRIGRA + Sbjct: 402 ELGIDVGNVDCVISSTIP--VNRLIQRIGRAARK 433 >UniRef50_C0VYP4 ATP-dependent helicase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYP4_9ACTO Length = 798 Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 138/490 (28%), Positives = 212/490 (43%), Gaps = 77/490 (15%) Query: 12 PDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 PD +P D F + ++P Q Q H ++ TGSGK+L A+L L L Sbjct: 38 PDWATPQVVDAFKTKGIEKPWQHQTQAATSIHHGTHTVIATGTGSGKSLCAWLPVLTAL- 96 Query: 71 REGGEDTREAHKR-------KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 E++ +A+KR + + LY++P KAL D L + Sbjct: 97 ----ENSNDANKRARLKDWARPTTALYLAPTKALAADQAHKLTELCPDL----------- 141 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRAR--ETLRGVETVIIDE 180 +R+G GDTP +E + R ++++T P+ L+ +ML R L G++ +I+DE Sbjct: 142 TGIRLGTADGDTP-RETKEWVRANANLILTNPDYLHHVMLPGNQRWARFLGGLKYLIVDE 200 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQR---IGLSATVRSASDVAAFLGGDRPVTVVN 237 +H G G+H++L L RL L I LSATV ++ AA L G Sbjct: 201 MHYWRGIT-GSHISLVLRRLLRLCRLYGANPTVIFLSATVAHPAETAAALIG-------- 251 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 DV +VA T A +E +W +E R Sbjct: 252 ---------------VTEADVHTVAEDTSRI--AAKELILWQPGYAIAENETEPRR---- 290 Query: 298 FTNSRGLAEKLTARLNELYAARL----QRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 ++ A KLTA L A L R+ + +V A E S + + S +A Sbjct: 291 -VSATAEAAKLTAHLVGADARVLTFVRSRAAAESVSAHSREQISAYYPHLIGS----VAA 345 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 G + +E+R + E AL++G+LR +V T++LELGID+ +D+ + V P + AS Q+I Sbjct: 346 YRGGYLPEERREL-ETALRTGQLRSLVTTNALELGIDISGLDVTLTVGWPGTRASLWQQI 404 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIV--ECMFAGRLENLTPPHNPLDVLAQQTVAA 471 GRAG G + GL + +D+ V+ E +F P N +L AA Sbjct: 405 GRAGR---GETAGLSVLVAADNPLDNYVMAHPEIIFEPVEAATINPTNQY-ILTPHICAA 460 Query: 472 AAMDALQVDE 481 AA L D+ Sbjct: 461 AAEHPLTEDD 470 >UniRef50_Q8ZSF8 Alr7552 protein n=2 Tax=Nostocaceae RepID=Q8ZSF8_ANASP Length = 906 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 117/481 (24%), Positives = 198/481 (41%), Gaps = 88/481 (18%) Query: 11 LPDVFSPATRDWFLRA-FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 +PD P + ++ Q + Q + W + + ++ PT SGK+++ FL + Sbjct: 97 IPDDIHPLVKLALSKSGITQLYSHQVEAWQAYKKGKDIILQTPTSSGKSIS-FLIPI--- 152 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 E K K++ + + +KAL D ++ + + DE R +N Sbjct: 153 -------IHECLKGKSALVFF--NLKALAFDQVEKIRSFVSHL-DENIRPQILNIN---- 198 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-------RETLRGVETVIIDEVH 182 GD P QER L N P IL TP+ L + RET+R + ++ DE+H Sbjct: 199 ---GDIPPQERKLLYSNQPSILCVTPDVWNHELNNYQFDSNWGFRETIRKLSIIVCDEMH 255 Query: 183 AVAGSKRGAHLALSLERLDALLHT------SAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 G G+H AL R ++ + Q I SAT+ ++S++A + Sbjct: 256 FYQGI-FGSHFALLNRRTQLMIESVGNDISKLQYIFASATISNSSEIAQKISN------- 307 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST- 295 R Q + + +D + S S R + + +T +L + Sbjct: 308 -----REEQSNLAI----IDQSGAKRSEITFISLKPRNNTFY---QTAQFAAMLVSKGIV 355 Query: 296 -IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF-ESTSGATSNRVQSSDVFIAR 353 I F +SR L + LT + R I + H ES S Sbjct: 356 GICFCDSRELVKVLTNAI---------RKALIEMQLPHLGESIS---------------- 390 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 + +GS+ QR ++SG+++ +++TS+LE G+D+G +D I + P S+ + QR Sbjct: 391 AFYGSMKANQRNKIIADIQSGKVKFIISTSALEAGLDIGCIDATIVHSYPGSILAFRQRA 450 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDS--AVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 GRAG Q G+ L F ++R ++DS A E + + E + HN L Q +A Sbjct: 451 GRAGRQEAGL---LVFIPSKRSIMDSYYANYPERLLSDPPEIINFNHNYETTLEQHILAC 507 Query: 472 A 472 Sbjct: 508 C 508 >UniRef50_D0WK34 ATP-dependent RNA helicase, DEAD/DEAH box family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WK34_9ACTO Length = 831 Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 149/549 (27%), Positives = 228/549 (41%), Gaps = 63/549 (11%) Query: 12 PDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 P+ +P +D R ++ + Q + + H +V TGSGK+LAA++ ALD L Sbjct: 38 PEWVAPEVKDALANRGIRELWSHQAEAAELLHGGTHTVVATGTGSGKSLAAWIPALDLLS 97 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 R G + A+ R +LY++P KAL D L G+A R EV+ R+G+ Sbjct: 98 RRGRGRSGLANIRYRPSVLYLAPTKALAAD-------QLVGLARLAR-----EVDPRIGV 145 Query: 131 RTGDTPAQERSK-LTRNPPDILITTPESL-YLMLTSRAR--ETLRGVETVIIDEVHAVAG 186 D A+ K R D++++ P+ L + ML S R RG+ V++DE H+ G Sbjct: 146 AAADGDAEASVKRWAREYADVVLSNPDFLQHAMLASHERWARLWRGLAMVVMDEFHSYRG 205 Query: 187 SKRGAHLALS---LERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR--PVTVVNPPAM 241 GA++A + L RL LSAT ++ A GD PV V Sbjct: 206 VF-GANVAATVRRLLRLAGHYGACPAVAFLSATSGDPAETARRFLGDSFGPVQAVERDGS 264 Query: 242 RHPQIRIVV---------PVANMDDVSSVASGTG----EDSHAGREGSIWPYIETGILDE 288 R+V+ A + V A GTG D+ GR + T + Sbjct: 265 PRGPKRLVLWRCREVEGEQRAKREGVPR-AEGTGLKPRSDAGTGRHAGVQNRTGTEGNPK 323 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS----GATSNRV 344 + R A L + AA ++ + A E + ++ Sbjct: 324 TGHDAGADLPGGPRRAANTEAGELTGVLAAAGAQTLTFVRSRAGAERVAEIARDWSAANA 383 Query: 345 QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPL 404 D IA G + +++RA+ E +L+SG+LR + T++LELGID+ +D V+ P Sbjct: 384 SGFDPEIAAYRGGYLPEDRRAL-EGSLRSGQLRALATTNALELGIDVSGLDAVVVTGWPG 442 Query: 405 SVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV--ECMFAGRLE-NLTPPHNPL 461 + AS Q+IGRAG + G +F R D +D ++ E E N+ P NP Sbjct: 443 THASFAQQIGRAG-RAGKPGVAVFI--GRDDPLDQYLLSHPEVFTQSPAETNVFDPANPH 499 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 +L AAA + + D + A + DL D L R P+G F Sbjct: 500 VLLPHVCAAAAELPLTEADAEVFGLDSTALFDDLAS-------DGLLRRRPNGWF----- 547 Query: 522 KLVWNRETG 530 WN G Sbjct: 548 ---WNASLG 553 >UniRef50_B0RA13 Putative helicase n=1 Tax=Halobacterium salinarum R1 RepID=B0RA13_HALS3 Length = 810 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 129/484 (26%), Positives = 201/484 (41%), Gaps = 75/484 (15%) Query: 2 ADNPDPSSLLPDVFSPATR-DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT-L 59 AD P +LPDV + D + Q + + V T SGKT + Sbjct: 40 ADTVPPGEVLPDVLAEQLEYDLYTH--------QAEALRTLKDGSNVSVATSTSSGKTWV 91 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 A +AL +L + +R L++ P KAL Q L G+ D+ Sbjct: 92 YALYFALRKL------------ENPDARGLFLYPTKALSAGQQE----ALNGLFDQ---- 131 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL--YLMLTSRARETLRGVETVI 177 V+ R GDT Q+R ++ R D+ I+ + YL + R E V+ Sbjct: 132 --LGVDARAETYDGDTD-QDRKQIIRERVDVPISNFAGINQYLDAHQKWRAVFANCELVV 188 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALL-HTSA--QRIGLSATVRSASDVAAFLGGDRPVT 234 IDE H +G G H++ + RL LL H A Q + +AT+ + ++ A L G Sbjct: 189 IDEAHTYSGV-HGMHVSWVIRRLRRLLDHYGADPQLVCTTATIGNPAEHARLLTG-AAFD 246 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR- 293 V+ H + I + D V G+ S + +L + H Sbjct: 247 VIADDGSPHGRREIAFWQPPLQDDGDVVDTVGDSPLPAMRKSTASEAAS-VLAHLTNHDM 305 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 T++FT+SR E I+V A E+ S ++R + Sbjct: 306 QTLMFTDSRQGTE-------------------ISVKRA-IENASAHPASRTDTE----YA 341 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 +H +S+ +R TE AL++GE+ VV+TS+LELGID+G +D + P + S QRI Sbjct: 342 PYHAGLSQGKREATENALRAGEVDGVVSTSALELGIDIGTMDATVISGYPGTRQSFWQRI 401 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE--CMFAGRLEN--LTPPHNPLDVLAQQTV 469 GRAG S ++ P T D VD ++ + +E+ +T +NP V AQ + Sbjct: 402 GRAGRGTSN-SLAVYVPET--DGVDQYILDNPAYLLGDNIEDAVVTLSNNP--VFAQHVL 456 Query: 470 AAAA 473 AA+ Sbjct: 457 CAAS 460 >UniRef50_B4W2E3 DEAD/DEAH box helicase domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2E3_9CYAN Length = 1053 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 108/401 (26%), Positives = 162/401 (40%), Gaps = 88/401 (21%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107 L+ PT SGKTLA L L+ + L+I P+KAL D R + Sbjct: 280 LLSTPTASGKTLAFLLPILETCL-----------SNPHATALFIFPLKALAVDQLRQIHD 328 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR 167 + I +R + V + TGD P ER KL P I+ TP+ L+ L + Sbjct: 329 IIDLIPKFQR--------INVVMLTGDVPMAERIKLLEQSPQIICITPDLLHHQLFKVFK 380 Query: 168 ET-------LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL------HTSAQRIGLS 214 LR + ++IDE H GS GAH A + RL + T Q I + Sbjct: 381 PQWQSWQLFLRNLRYLVIDEAHTYRGS-FGAHFANLMRRLRLAIDQSGGDSTQLQHIFAT 439 Query: 215 ATVRSASDVA-AFLGGDRPVTVV-NPPAMRHPQIRIVV---PVANMDDVSSVASGTGEDS 269 AT+ + ++A F G ++++ N A + + + ANMD + V S Sbjct: 440 ATIGNPGELAETFSGRQGNLSLIENSGAATAARTTLCLAPSKYANMDSCAIVLS------ 493 Query: 270 HAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVD 329 ++E G+ IVF NSR + L ++ E R Q Sbjct: 494 ----------WLEQGL--------KGIVFCNSRISLKSLLNQIQEHLEQRGQ-------- 527 Query: 330 AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGI 389 G ++V R +GS+ R Q L +GE+ ++ATS+LE GI Sbjct: 528 --------GYLKSQV--------RIFYGSLKSHHRRQIIQQLSAGEISIILATSALEAGI 571 Query: 390 DMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 D+ +D + P S+ QR GRAG + G+ +F P Sbjct: 572 DIPELDCCLLRGYPGSLMQLRQRQGRAGRKSPGLV--IFLP 610 >UniRef50_C8VXB9 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VXB9_DESAS Length = 911 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 98/389 (25%), Positives = 171/389 (43%), Gaps = 61/389 (15%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 + ++ T SGK+LA + +++L + +++I+ I P+KALG + ++ Sbjct: 85 NVCLVTGTASGKSLAFYALGIEKLV-----------AKPSAKIIAIYPLKALGREQEKRW 133 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY--LMLT 163 + L +N +VG GD + R K ++I TP+ ++ L+L Sbjct: 134 KNALDAAG----------INAKVGRIDGDVKSMARRKAILKDCQVVIMTPDIIHHWLLLN 183 Query: 164 SRARETLRGVETV---IIDEVHAVAG--SKRGAHLALSLERLDALLHTSAQRIGLSATVR 218 RE ++ + V ++DEVH G A L L L A + + Q I SAT+ Sbjct: 184 ISDREIVKFLTNVALFVVDEVHTYTGVFGSNAAFLFRRLRHLIAFTNNTPQFICASATMA 243 Query: 219 SASDVAAFLGGDRPVTVVNPPAMRHP--QIRIVV--PVANMDDVSSVASGTGEDSHAGRE 274 S L G P ++ P +++IV P D ++ + Sbjct: 244 SPEKHLENLFG-VPFHIIGSELDTSPRQEVKIVFLRPHLKGDYLTEI------------- 289 Query: 275 GSIWPYIETGILDEVLR-HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF 333 T L E+ R I F +SR AE +T+ L+ + R ++ +I V++ Sbjct: 290 --------TYFLKELTSIERRFIAFVDSRKSAELITSILSRGHQGR-EQGANIEVESDKI 340 Query: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 T +R+ + ++ RS + +E + I ++ L +G L VV+TS+LELG+D+ Sbjct: 341 --TGIIKPDRIHTLNILPYRSGY---EEEDQIIIQERLYTGSLSGVVSTSALELGLDIAD 395 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGG 422 + V+ + P S S LQR+GR G G Sbjct: 396 LSAVVLLGVPYSSTSLLQRMGRVGRNCPG 424 >UniRef50_C1SGP7 Helicase family protein with metal-binding cysteine cluster n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGP7_9BACT Length = 823 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 100/391 (25%), Positives = 159/391 (40%), Gaps = 82/391 (20%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93 Q + + L+ PT SGKTL L ++ ++ H R + LY+ P Sbjct: 60 QSEAYQQVKSGRDVLITTPTSSGKTLCYNLPIIEDMY----------HNRNVTA-LYLFP 108 Query: 94 IKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILIT 153 +KALG D R+L+ L I GE + + + GDT + R K+ ++ P+I+ + Sbjct: 109 LKALGRDQMRHLENFLTNIP-----LGE---GIGLAVVDGDTDKKVRRKIQKDRPNIIFS 160 Query: 154 TPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQR 210 P+ L+ + + E L ++ +++DE+H G G H+ R L+ Q Sbjct: 161 NPDILHYAVLPKRNEWADFLNNLKYIVVDELHTYRGI-FGNHVYNLFARF-MRLYPHVQI 218 Query: 211 IGLSATVRSASDVAAFLGGDRPVTVVN---PPAMRHP-QIRIVVPVANMDDVSSVASGTG 266 I SAT+ + + A + V P +H I +PV Sbjct: 219 ISCSATIGNPKEFADTMFSRDFYHVSKSGAPSGKKHFLLINSDLPVV------------- 265 Query: 267 EDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSI 326 SI Y+ L+ L+ TI FT SR E++ A L + Sbjct: 266 ---------SISNYLLKTNLEAGLK---TICFTKSRKQTERIFANL-------------L 300 Query: 327 AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 A D + ++ S S+ E+R E L G L+ V++TS+ E Sbjct: 301 AADPGYGKTVS----------------SYRAGFLPEERREIEADLAEGRLKAVISTSAFE 344 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 LGID+G VD + P S+ S QR GR+G Sbjct: 345 LGIDIGGVDCTVLAGYPGSLMSLWQRAGRSG 375 >UniRef50_C7MGF1 Helicase family protein with metal-binding cysteine cluster n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MGF1_BRAFD Length = 833 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 133/502 (26%), Positives = 211/502 (42%), Gaps = 81/502 (16%) Query: 25 RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 R P Q Q +A + ++ T SGK+LA L L + G + +R Sbjct: 54 RGITAPWIHQEQAAQLAHGGQDVVLATATASGKSLAYLLPVLTAI---GAREHDPEARRA 110 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 T+ LY+SP KAL D N+ +AD G + RV + GDTPA++R + Sbjct: 111 TA--LYLSPTKALAADQLTNI----TAMAD-----GAGIRDARVAVYDGDTPAEQR-RWV 158 Query: 145 RNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 R +++T P+ L+ L + R + V+IDE H+ G G+H+++ + RL Sbjct: 159 RRHGTVVLTNPDMLHFGLLPGHEQWAHFFRALRYVVIDECHSYRGVF-GSHVSMVVRRLR 217 Query: 202 AL-LHTSAQRIGLSATVRSAS---DVAAFLGGD-RPVTVVNPP------AMRHPQIRIVV 250 + H A + A+ +A+ + +G D PVT P + P R V Sbjct: 218 RIAAHYRADPTFILASATTANPELSASRLIGRDVEPVTEDGSPRAGLTIGLWEPGTRTRV 277 Query: 251 ----PVANMDDVSSVASGTGE------DSHAGREG----------------SIWPYIETG 284 A DD A+ G+ D G +G S Sbjct: 278 DGRGDPARWDDGPGQATEGGDAEGEETDGADGADGVDGADGAGRTEEPLRRSATSEAAAL 337 Query: 285 ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS--PSIAVDAAHFESTSGATSN 342 + D V R T+VF SR AE +++ L + + + P +A A + G Sbjct: 338 LADLVERDVQTLVFARSRRGAELVSSGARRLLEQKAEHTHAPQLADRAGRVAAYRG---- 393 Query: 343 RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT 402 G +++E+R + E AL+SG L+ + +T++LELGID+ +D V+ Sbjct: 394 --------------GYLARERREL-EDALRSGALKALASTNALELGIDIAGLDAVVVAGW 438 Query: 403 PLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV--ECMFAGRLE-NLTPPHN 459 P + AS Q+ GRAG + L R D +D+ V+ E +F +E + P N Sbjct: 439 PGTRASLWQQFGRAGRRQDADGGALALFVAREDPLDTYVVHHPETIFGAEVEAAVFDPGN 498 Query: 460 PLDVLAQQTVAAAAMDALQVDE 481 P V+ AAAA A++ E Sbjct: 499 PY-VMTPHLCAAAAELAIRDGE 519 >UniRef50_A5E7Q8 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E7Q8_LODEL Length = 2016 Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 111/432 (25%), Positives = 184/432 (42%), Gaps = 62/432 (14%) Query: 7 PSSLLP----DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 P+S LP +VF F R + + P+ + E+ L+ APTG+GKT A Sbjct: 353 PTSSLPAWAREVFPTNETTTFNRI---QSKIYPKAF---GSDENLLICAPTGAGKTNVAM 406 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L + D A + +I+YI+P+KAL + R Q RR Sbjct: 407 LTMLRAISNHRFND---AINKDQFKIVYIAPLKALVLEQVREFQ-----------RRLTP 452 Query: 123 EVNLRVGIRTGDTP-AQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEV 181 L V TGD +Q++ K T ++LITTPE + ++T E L ++ VIIDE+ Sbjct: 453 VFGLVVNELTGDASLSQQQIKET----NVLITTPEK-WDIITRENHEYLSLIKLVIIDEI 507 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 H + +RG L + R++ + +GLSAT+ + +DVA F+G + + Sbjct: 508 HLL-HDQRGPVLESIIARINRDQENEVRIVGLSATLPNYNDVAKFIGANEEGIFYFDLSY 566 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R P + + + + + + ++ IVF + Sbjct: 567 R--------PCPLEQKFVVIKDQKALKKRLAIDEACYDLVHKTL----KQNHQLIVFVHL 614 Query: 302 RG----LAEKLTARL--NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 R AE L RL EL + + + + + A R+ S + +H Sbjct: 615 RNETVSTAEYLINRLLDQELDLNLVAEDSTREILSQESAQVTNAKLQRILGSGI---GAH 671 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LS 405 H +SKE+R + E G L+ +V+T++L G+++ A ++I +V +P LS Sbjct: 672 HAGLSKEERTLVEDLFAQGHLKVLVSTATLAWGVNLPAHTVIIKGTEVYSPESGSWMQLS 731 Query: 406 VASGLQRIGRAG 417 Q +GRAG Sbjct: 732 PQDVFQMLGRAG 743 >UniRef50_C1E4U3 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1E4U3_9CHLO Length = 880 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 112/408 (27%), Positives = 177/408 (43%), Gaps = 70/408 (17%) Query: 34 QPQTWHVAARSEHALVIA-PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYIS 92 Q + H A + + ++VIA PT SGK+LA YA+ L R G ++++SR + + Sbjct: 181 QKEAIHAATKGKRSVVIATPTASGKSLA---YAVPLLQRLG--------EKRSSRAIVLF 229 Query: 93 PIKALGTDVQ---RNLQIPLKGIADERRRRGETEVNLR----VGIRT--GDTPAQERSKL 143 P+KAL D R + +A+ G T LR + +RT GDT +R + Sbjct: 230 PLKALANDQLAKFRKFPEAAERLAESGAYEGSTLKKLRGMASITVRTLDGDTKESDRVVI 289 Query: 144 TRNPPDILITTPESL--YLMLTSRARETLRG----VETVIIDEVHAVAGSKRGAHLALSL 197 +L+T P+SL YL+ ++++ + +E V++DE H G G+H+A Sbjct: 290 KSEKTQLLLTNPDSLHHYLLPGYQSKKFTKTFWQHLELVVVDEAHTCRGVF-GSHVANVF 348 Query: 198 ERLDALLHTS----AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 R+ L + I SAT+ D P +V Q+ PVA Sbjct: 349 RRVIRLCRACDGPGPEFICTSATI------------DNPAQLVK-------QLTTKDPVA 389 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 V+ + +GE + +W E G + S N L + L Sbjct: 390 ----VTRNGAPSGEKAMI-----LWQPPELGSI--AAEDGSIAENGNGASLVQNRIRCLA 438 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 +YA +L S V A ++ RV S+ G + R E L S Sbjct: 439 FVYARKLTESVCRDVKAILLKAGRQDLIARVD--------SYRGGYDADLRRNLEGRLAS 490 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 GE+ C+V TS+LE+GID+G +D + V P + A+ Q+ GRAG ++G Sbjct: 491 GEVSCLVCTSALEMGIDVGDLDATVHVGVPETAAAMWQQAGRAGRRLG 538 >UniRef50_Q10YD0 DEAD/DEAH box helicase-like n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10YD0_TRIEI Length = 905 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 109/412 (26%), Positives = 174/412 (42%), Gaps = 97/412 (23%) Query: 49 VIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIP 108 + PT SGKTL L L+ ++ +R LYI P+KAL D + L Sbjct: 174 IFTPTASGKTLCYNLAILESCLQQ-----------PETRALYIFPLKALALDQTQKL--- 219 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL-TRNPPDILITTPESLYLML---TS 164 ER + ++++G+ TGD ++ R KL NPP+IL +P+ L+ L TS Sbjct: 220 ------ERMVSYFPKNSVKIGLITGDISSENRKKLFIPNPPNILGVSPDLLHYQLYKITS 273 Query: 165 RARETLR----GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHT------SAQRIGLS 214 + RE R + V+IDE H G+ GAH A + RL ++ Q I S Sbjct: 274 KDREKWRQFFQQLRYVVIDESHTYIGA-FGAHFANLIRRLKMVVDIVGGSSEKLQFIFSS 332 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 AT+ + +++A DR + P H + S +G DS Sbjct: 333 ATIGNPAEMAMRF-SDRS----HQPERLH-----------------LISKSGADS----S 366 Query: 275 GSIWPYIE---------TGILDEVLRHRST-IVFTNSRGLAEKLTARLNELYAARLQRSP 324 G ++E I+ LR+ T +VF+NSR +KL + Sbjct: 367 GKTILFLEPSQIANPDSCKIILSWLRYNLTGVVFSNSRSAVKKLLGII------------ 414 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 + T+ + + I +GS+ +R Q L++G ++ +++TS+ Sbjct: 415 ---------KRTADKNGESYLADKIAI---FYGSLEFHRRQDIIQKLQTGVVKVILSTSA 462 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 LE GID+ +D + P S+ S QRIGR G + G+ +F P + L Sbjct: 463 LEAGIDLPELDCCLVRGYPGSLMSWKQRIGRVGRKNPGLI--MFLPVAQNTL 512 >UniRef50_C0QU99 ATP-dependent rna helicase, dead/deah box family n=2 Tax=Aquificales RepID=C0QU99_PERMH Length = 816 Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 118/463 (25%), Positives = 202/463 (43%), Gaps = 93/463 (20%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93 Q + + ++ +V PT SGK+ L L+RL +E E ++ + I P Sbjct: 49 QVEGLNAVKEGKNIVVTTPTASGKSFIYILSILERL-KENPE----------TKGIIIFP 97 Query: 94 IKALGTD-VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILI 152 +KAL D + + + L ET ++ RV + GDT ++R ++ ++PP LI Sbjct: 98 LKALARDQYGKIMDLIL-----------ETGIDARVDVYDGDTDREKRQEIKKDPPTFLI 146 Query: 153 TTPESL---YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQ 209 TTP+ L L + ++ +++DE+HA G G+H+A + RL + Sbjct: 147 TTPDMLNAGILPYHTGWSSFFENLDFIVLDEIHAYRGI-LGSHIANIVRRLKRITGYYRT 205 Query: 210 R----IGLSATVRSASDVAAFLGGDRPVTVVN---PPAMRHPQIRIVVPVANMDDVSSVA 262 + I SATV + S A+ L G+ V + P R QI N+ + Sbjct: 206 KKPVFIMNSATVHNPSSFASKLIGEEVVEISRSGAPSPEREIQI-----FRNLR-----S 255 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 S T E I + V+ S+IVF +SR AE L+ R+ ++ +++ Sbjct: 256 SETAE----------------LIANTVIEDISSIVFVDSRKEAEILSLRVKDIL---VKK 296 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 VD ++ G E+R I E L + + V++T Sbjct: 297 GRDDLVDK--------------------VSPYRSGYTPAERREI-EFKLLTKNILAVIST 335 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 S+LE+GID+G +D I V P ++A QR GRAG + + + P +R+ +D + Sbjct: 336 SALEMGIDIGDLDNCILVGYPGTLAQLWQRFGRAGRR-DRKAYNILIP--KRNALDQYFV 392 Query: 443 V--ECMFAGRLENLTPPHNPLD--VLAQQTVAAAAMDALQVDE 481 E +F ++E P NP + +L + A+ +++DE Sbjct: 393 KNPEELFYRKMEE--PVINPENRYILKKHLPVMASEIPIKLDE 433 >UniRef50_Q4UHC2 DEAD-box helicase, putative n=2 Tax=Theileria RepID=Q4UHC2_THEAN Length = 1925 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 106/415 (25%), Positives = 178/415 (42%), Gaps = 64/415 (15%) Query: 5 PDPSSLLPDVFSPATRDWFLRAF---KQPTAVQPQTWHVAARSEHALVI-APTGSGKTLA 60 P L+P P +W RAF ++ +Q + ++ A ++ L+I APTG GKT Sbjct: 245 PSEDELIPISTLP---EWVQRAFIGVEKLNLIQSKVFNSAFNTQQNLLISAPTGCGKTNV 301 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 L L +RE E +K +++YISP+KAL +++ E+ + Sbjct: 302 GLLCLLQN-YREYFE-----QGKKCGKVIYISPMKALASEIV------------EKYSKS 343 Query: 121 ETEVNLRVGIRTGD--TPAQERSKLTRNPPDILITTPESL-------YLMLTSRARETLR 171 L V TGD P E ++ DIL+TTPE + T L Sbjct: 344 LAHSGLVVREVTGDFQVPKSELEEI-----DILVTTPEKCDVVTRNSFSTATQSDDSFLT 398 Query: 172 GVETVIIDEVHAVAGSKRG---AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 V +I DE+H + +RG +A RL + + +G+SAT+ + D+A FL Sbjct: 399 RVNLIIFDEIHLL-NDERGPVIETIAARFFRLIEWTQVTRRVVGMSATLPNYEDIATFLR 457 Query: 229 GDRPVTVVNPPAMRH-PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 T RH P +I + N DD+ + ++ I++ Sbjct: 458 VPPEHTYYFGREYRHVPLQQIFYGIKN-DDI--------------YKNNMLMICFDHIVE 502 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT---SNRV 344 + + +VF +SR +R+ EL + ++S D + + S +N Sbjct: 503 TLESGKQCMVFVHSRNETFTTASRIVEL-VNKSEKSELFEPDLSQVKRFSAQLMRRNNLK 561 Query: 345 QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 SD I+ HH +SK R + E+ KSG ++ +V TS+L G+++ A ++I+ Sbjct: 562 LLSDYSIS-IHHAGLSKSDRDLVEEMFKSGLIKVLVCTSTLAWGVNLPAHSVIIK 615 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 111/466 (23%), Positives = 200/466 (42%), Gaps = 103/466 (22%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIA-PTGSGKTLAAF 62 NP P+S+L + + F +Q Q +H A R++ +LV+A PTGSGKTL A Sbjct: 1113 NPLPTSVL--------NQYNVYKFPYFNPLQTQVFHKAFRTDESLVVAAPTGSGKTLVAE 1164 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L RLF + H K + +YI+P+KAL A ER + Sbjct: 1165 L-GLFRLF--------DKHPDKIA--VYIAPLKAL---------------AHERFKDWCK 1198 Query: 123 EVNLRVGIR-TGDTPAQ---------ERSKLTRNPPDILITTPESLY-LMLTSRARETLR 171 +++ + ++ TGDT + ER +L R DI+ITTPE + R ++ + Sbjct: 1199 KLHFKKILQLTGDTSSNNLDNQLYKFERDELDR--YDIVITTPEKWDGISRHWRRKKLVT 1256 Query: 172 GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLG 228 V +I+DE+H + G RGA + + R + H++ + I LS ++ + ++++ ++G Sbjct: 1257 KVALIILDELH-LLGESRGAIIESIISRQYTINHSTGAQVRYICLSTSLSNLNEISEWIG 1315 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDE 288 P PA+R + + + G ++ R S + D Sbjct: 1316 --IPNVYNFSPAVRPVKCNLYI------------DGFSIKAYCPRMNS----MNKPCFDT 1357 Query: 289 VLRH---RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ 345 +++H + ++F +SR R+ + + H S S + N Sbjct: 1358 IIKHDHSSNVLIFVSSRR-------------QTRMTAQDLVGLLQFHNISFSNSCDNYFF 1404 Query: 346 SS---DVFIARS---HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI- 398 + F+ HH +S + R + + +G+L+ ++ATS+L G+++ A ++I Sbjct: 1405 DDEWLNTFVPHGIGIHHAGLSTKDRELVQDLFLNGKLKVLIATSTLAWGVNLPAKIVIIK 1464 Query: 399 ---------QVATPLSVASGLQRIGRAGHQV-GGVSKGLFFPRTRR 434 + S +Q +GRAG + G + F TR+ Sbjct: 1465 GTEFYDGRVKKYIDYSATDIIQMVGRAGRNIYDGEAYAYVFTETRK 1510 >UniRef50_B0EGZ1 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative n=2 Tax=Entamoeba RepID=B0EGZ1_ENTDI Length = 1804 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 109/435 (25%), Positives = 179/435 (41%), Gaps = 71/435 (16%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYAL 66 ++L D PA + + VQ + + A + E+ LV APTG GKTL A L L Sbjct: 162 KNILDDYTRPA-----MLNYTHLNYVQSKVYETAYNTGENMLVCAPTGCGKTLTALLCML 216 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 E H + +I+YISP+KAL T++ + L + Sbjct: 217 -------REVKMHQHDMEHLKIVYISPLKALATEMTTTFKKHLICF------------KM 257 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 RV TGDT SK +++ TPE ++ + E + ++ +I+DEVH + Sbjct: 258 RVEEVTGDTNI---SKAAIASTHVIVATPEKFDVLTRKQDAEFVNDIQLLIVDEVH-LLD 313 Query: 187 SKRGAHLALSLERLDALLHTSAQR----IGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 RGA + + R ++ S QR +GLSAT+ + DV F+ P + Sbjct: 314 EDRGAVIETIVARTLRMVE-SQQRPIRVVGLSATLPNYQDVGEFIRA-------KPENIF 365 Query: 243 HPQIRI-VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 H + VP++ V + + + Y E I+ V R + IVF ++ Sbjct: 366 HFDMSYRAVPMSTKFIVLPEDEKENKGQQFTQHATDLAYDEAEIV--VKRGKQVIVFVHT 423 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSG---ATS-NRVQSSDV-----FIA 352 R R L A R R +F G AT ++Q D+ Sbjct: 424 R--------RETVLTAQRFIRRMKEKGATEYFTGNKGREFATRIKKLQGKDIKELLEMGI 475 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VAT 402 H+ + + R E A ++G L+ +V+T++L G+++ A ++I+ + Sbjct: 476 GVHNAGMFRSDRTFIEDAFRNGSLKVLVSTATLAWGVNLPAHTVIIRGTEVFNSDKGCSD 535 Query: 403 PLSVASGLQRIGRAG 417 +S+ LQ GRAG Sbjct: 536 KISILDVLQMFGRAG 550 Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 97/416 (23%), Positives = 185/416 (44%), Gaps = 88/416 (21%) Query: 34 QPQTWHVAARSEHALVI-APTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYIS 92 Q Q + + + +++ APTGSGKT+AA L L ++FR+ + +++YI+ Sbjct: 1010 QTQFFFICFNTNKNVIVGAPTGSGKTVAAELCML-KIFRDTPD----------KKVVYIA 1058 Query: 93 PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILI 152 P+KAL ++ + D+ G+ V L G T D+ A ++ D+++ Sbjct: 1059 PMKAL-------VKEKMSDWKDKLITMGKNIVEL-TGDFTPDSAAIAKA-------DVIL 1103 Query: 153 TTPES---LYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLER---LDALLHT 206 TTPE + + T ++ ++ V VI+DEVH + G +RG + + R ++ L Sbjct: 1104 TTPEKWDGITRLWTKKSY--VQKVGLVILDEVH-LLGEERGPVIEAIVTRTKQINKKLGI 1160 Query: 207 SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTG 266 + L+ + + D+ ++G D+ +V N H +R V +A++D G Sbjct: 1161 QTRICALTTAIANVDDMMNWIGVDKD-SVFN----FHSSLRPVPLIAHID-------GFP 1208 Query: 267 EDSHAGREGSIWPYIETGILDEVLRH---RSTIVFTNSRGLAEKLTAR------LNELYA 317 ++ R + + + H + ++F +SR +LTA+ N+ Sbjct: 1209 TKAYCPRMAT----MNKPCYQAIRLHSPDKPVMIFVSSRR-QTRLTAQDLVKFCFNDGNP 1263 Query: 318 ARLQRSPSIAVDAAHFESTSGATSN----RVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 + P FE S T N ++ ++ HH ++ R ITE+ KS Sbjct: 1264 QKFLHMP--------FEEMSEITKNITDGILKECLLYGIGMHHAGLNDHDREITEKLFKS 1315 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQ------------VATPLSVASGLQRIGRAG 417 +++ ++ T++L G+++ A ++I+ V PL+ LQ +GRAG Sbjct: 1316 NKIQILITTATLAWGVNLPAHLVIIKGTEYFDGKKHQFVDMPLT--DVLQMMGRAG 1369 >UniRef50_B2AQ90 Predicted CDS Pa_4_4960 n=1 Tax=Podospora anserina RepID=B2AQ90_PODAN Length = 1381 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 121/429 (28%), Positives = 185/429 (43%), Gaps = 75/429 (17%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVI-APTGSGKT----LAAFLYA 65 LPD F L F+ AVQ + + ++ + +V+ APTGSGKT LA A Sbjct: 133 LPDKFRA------LFPFEFFNAVQSKCFEAVYKTNNNVVVSAPTGSGKTAILELAICKLA 186 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 LDR G E+ + I+Y +P KAL + R D ++ G + Sbjct: 187 LDR----GHENFK---------IVYQAPTKALCAEKAR----------DWEKKFGH--MK 221 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVH 182 L+ TGDT E ++ I++TTPE + +T + R L+ VE +IDEVH Sbjct: 222 LKCAELTGDTSQAEMRRV--GDASIIVTTPEK-WDSITRKWQDHRRLLQLVELFLIDEVH 278 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + RGA L + R+ + T+ + I LSATV ++ D+A +LG D T + PA+R Sbjct: 279 -ILKDVRGATLEAVVSRMKTI-GTNVRFIALSATVPNSDDIAQWLGRDH--TNQHLPALR 334 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH---RSTIVFT 299 PV V G E + +++ + + + RH + +VF Sbjct: 335 ETFGEEFRPVKLQKFVYGYECN-------GNEFILDKLLDSKLPNLIARHSQQKPILVFC 387 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 +R E + L E AAR P+ + A + S +Q HH + Sbjct: 388 FTRKSCESTASLLAEYAAAR----PNTKLWPAP-KGRIPVISRELQEIVKLGVAFHHAGL 442 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGID-----------MGAVDLVIQVATPLSVAS 408 + R EQ+ GEL + TS+L +GI+ MG D +Q + L V Sbjct: 443 DVQDRGAVEQSFLKGELGVICCTSTLAVGINLPCHTVVLKGTMGYADDKLQEYSDLEV-- 500 Query: 409 GLQRIGRAG 417 +Q +GRAG Sbjct: 501 -MQMLGRAG 508 >UniRef50_Q9UT24 Pre-mRNA-splicing factor brr2 n=5 Tax=Fungi/Metazoa group RepID=BRR2_SCHPO Length = 2176 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 142/560 (25%), Positives = 237/560 (42%), Gaps = 94/560 (16%) Query: 21 DWFLRAFKQPTA---VQPQTWHVA-ARSEHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 +W +AF + +Q + +A E+ L+ APTG+GKT A L L+ L + ED Sbjct: 508 EWSHQAFLNTQSLNRIQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILNELQKHLRED 567 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 + + +I+YI+P+KAL ++ N L T N+RV TGD+ Sbjct: 568 L--SFNLQNFKIVYIAPLKALVQEMVNNFSKRL------------TPYNIRVAELTGDS- 612 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVAGSKRGAHLA 194 + +K + I++TTPE + ++T +A + + V VIIDEVH + +RG L Sbjct: 613 --QLTKQQISETQIIVTTPEK-WDIITRKANDLSYVNLVRLVIIDEVH-LLHDERGPVLE 668 Query: 195 LSLERLDALLHTSAQR---IGLSATVRSASDVAAFLGGDRPV------TVVNPPAMRHPQ 245 + R+ + ++ +GLSAT+ + +DVA+FL D + P ++ Sbjct: 669 SIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYRPCPLKQEF 728 Query: 246 IRIV--VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 I I P M ++ A HAG+ ++F +SR Sbjct: 729 IGITEKTPFKRM-QTTNEACYEKVMQHAGK-------------------NQVLIFVHSRK 768 Query: 304 LAEKLTAR------LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 K TAR L E L RS + + + E+ S + N ++ + HH Sbjct: 769 ETAK-TARFIRDKALEEETIGHLLRSDAASREILRAEADSTSDEN-LKDLLPYGFAIHHA 826 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVA 407 + +E R +E G ++ +V+T++L G+++ A ++I QV +P LS Sbjct: 827 GMRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQ 886 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFP-----RTRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 LQ +GRAG Q +G+ + L++ + +E F RL + N Sbjct: 887 DVLQMLGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRLADCL---NAE 943 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRA------APWKDLPRRVFDATLDMLSGRYPSGD 515 L +D L Y R+ R+ P D + + D+L S Sbjct: 944 VSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSVGPEYDDDKYLVQKRADLLH----SAA 999 Query: 516 FSAFRPK-LVWNRETGILTA 534 + K LV+NR++G LTA Sbjct: 1000 ILLEKCKLLVYNRQSGTLTA 1019 >UniRef50_Q72FF8 ATP-dependent RNA helicase, DEAD/DEAH box family n=4 Tax=Desulfovibrio RepID=Q72FF8_DESVH Length = 1121 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 105/379 (27%), Positives = 149/379 (39%), Gaps = 82/379 (21%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107 +V PT SGKT L L++ R+ +R +Y+ P+KAL D Sbjct: 151 VVATPTASGKTFIYNLPVLEQFLRD-----------PDARAIYLFPLKALAQDQLATFNA 199 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR 167 + R I GDT R K+ PP +L+T PE L+L L Sbjct: 200 LTAHWPRDARPAA--------AIYDGDTTDHFRRKIRNAPPPVLLTNPEMLHLALLPHHE 251 Query: 168 E---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQR---IGLSATVRSAS 221 + + V++DEVH G GAH+A RL + + + SATV + Sbjct: 252 QWASLFASLTHVVVDEVHTYRGVL-GAHMAQVFRRLRRVCERYGAQPSFVFCSATVGNPG 310 Query: 222 DVAAFLGGDRPVTVVN---PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIW 278 ++A L G P V P RH +D S A+ + Sbjct: 311 ELAHNLTGLTPEVVTESGAPQGKRH--------FIFLDPEESPATAAIQ----------- 351 Query: 279 PYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSG 338 + L LR TIV+ SR + E L L+AA SG Sbjct: 352 --LLRSALKRGLR---TIVYCQSRRMTE-----LVSLWAA----------------EKSG 385 Query: 339 ATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI 398 +R+ ++ E+R E + SG+L V+ TS+LELGID+G++DL I Sbjct: 386 PYRDRIS--------AYRAGFLPEERRDVEARMASGQLLAVITTSALELGIDIGSLDLCI 437 Query: 399 QVATPLSVASGLQRIGRAG 417 V P +V S LQR GR G Sbjct: 438 LVGYPGTVMSTLQRGGRVG 456 >UniRef50_Q4PCP0 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCP0_USTMA Length = 1510 Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 113/402 (28%), Positives = 172/402 (42%), Gaps = 83/402 (20%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL--FREGGEDTREAHKRKTSRILYI 91 Q + + ++ +V T SGK+L +Y L L + GE T ++I Sbjct: 689 QAEALNALHEKKNVIVSTSTSSGKSL---IYQLPVLGAIEQDGEAT----------AMFI 735 Query: 92 SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDIL 151 P KAL D +R+LQ IA+ R G V GDT + R + R ++ Sbjct: 736 FPTKALAQDQRRSLQ---DLIANCERVEGAI-----VATYDGDTDKELRKDI-RERASVI 786 Query: 152 ITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERL----DALL 204 T P+ L+ + R LR + V++DE+H G GAH++ + RL AL Sbjct: 787 FTNPDMLHQSILPSEDLWRRFLRNLRYVVVDELHIYNG-LFGAHVSFIMRRLRRICSALG 845 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN---PPAMRHPQIRIVVPVANMDDVSSV 261 + + Q + SATV + L G V VV PA R + P + D + Sbjct: 846 NRTVQFVSCSATVANPKQHMQTLFGVEHVHVVTQDGSPAGRKEWLVWNPPYIDESDPA-- 903 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHR-----STIVFTNSRGLAEKLTARL-NEL 315 +G + Y E + +V RH TI+FT R E + ++ N+L Sbjct: 904 ------------QGRVSSYAE---VSKVFRHLIQRGVRTIIFTKVRRTCEIVMRQIRNDL 948 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 L+ P +A N+V S + S + R EQ + G+ Sbjct: 949 L---LEDRPDVA--------------NKVMS--------YRSGYSAQDRRKIEQDMFKGQ 983 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 L +VATS+LELGID+G++D VI + P S++S Q+ GRAG Sbjct: 984 LLGIVATSALELGIDIGSLDAVIMLGFPYSISSLRQQAGRAG 1025 >UniRef50_Q6Z8Y2 Os02g0111900 protein n=2 Tax=Oryza sativa RepID=Q6Z8Y2_ORYSJ Length = 927 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 108/429 (25%), Positives = 180/429 (41%), Gaps = 94/429 (21%) Query: 11 LPDVFSPATRDWFLRAF--KQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LP S + RD LR+ + A Q Q A EH +V T SGK+L + L+ Sbjct: 168 LPGHLSSSMRDA-LRSIGVTKLYAHQAQAVQSAVSGEHVVVSTSTSSGKSLCYNIPVLES 226 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + + LYI P KAL D + L + + V Sbjct: 227 ISQSSAPCA-----------LYIFPTKALAQDQLKTL----------LEMKPAFRSDFDV 265 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLML---TSRARETLRGVETVIIDEVHAVA 185 I GDT ++R+++ RN +LIT P+ L++ + ++ + L ++ ++IDE H+ Sbjct: 266 SIYDGDTAMKDRTRI-RNTARLLITNPDMLHMSILPCHAQFKRVLFNLKYIVIDEAHSYK 324 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 G+ G H AL L RL +RI +++ G P + + +P+ Sbjct: 325 GA-FGCHAALILRRL--------KRI------------CSYVYGSNPTFIFCTATLANPR 363 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIW---------------PYIETGIL-DEV 289 V+ +AN+D V V + T + +W P +E L E+ Sbjct: 364 -EHVMELANLDRVVLVDNDTS--PCGSKNFLLWNPPLQLAKAEDRRPNPVLEVSYLFAEM 420 Query: 290 LRH-RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSD 348 ++H I F +R + E++ + ++ + T+ N Sbjct: 421 VQHGLRAIAFCKTRKMCEQVLMQTRQI-----------------LKETAAELVN-----S 458 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVAS 408 + + R G V+ ++R I E L G LR V AT++LELGID+G +D + + P S+AS Sbjct: 459 ICVYRG--GYVASDRRKI-EADLFGGILRGVAATNALELGIDVGHIDATLHLGFPGSMAS 515 Query: 409 GLQRIGRAG 417 Q+ GR+G Sbjct: 516 FWQQAGRSG 524 >UniRef50_A4QWU8 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4QWU8_MAGGR Length = 1508 Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 52/400 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTW-HVAARSEHALVIAPTGSGKTLAAFLYA 65 P +LPD R + F+ AVQ +++ V +++ +V APTGSGKT A F A Sbjct: 237 PRDVLPD------RLRVVFPFELFNAVQSKSFASVYKTNDNVVVSAPTGSGKT-AIFELA 289 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + +L + + + +++Y++P KAL ++ R+ + + +N Sbjct: 290 ICKLLSQNTD--------QNFKVIYVAPTKALCSERARDWESKFR------------HLN 329 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVH 182 L TGDT + + S++ I++TTPE L +T R R+ L V+ V+IDEVH Sbjct: 330 LTSAELTGDTFSTDMSRV--RAAQIIVTTPEKLD-SITRRWEDYRKLLDLVQLVLIDEVH 386 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + + RGA L + + R+ + ++ + + LSATV ++ DVA +LG R T + PA Sbjct: 387 FLKDT-RGATLEVLICRMKTQV-SNIRVVALSATVPNSEDVAKWLG--RGNTDNHQPARL 442 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH---RSTIVFT 299 PV V + +G P ++T + + + H + IVF Sbjct: 443 ETFGEEFRPVRLQKHVYGLHC-------SGNAFQFEPQLDTKLCEVITTHSQKKPIIVFC 495 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 +R E +L++L+ + + + T+ +Q F HH + Sbjct: 496 FTRKSCELTAKKLSQLWISMADDKKPWPGPGQNMKVTNDGLQQVMQQGVAF----HHAGL 551 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 ++ R E+A G+L + TS+L +G+++ ++++ Sbjct: 552 EQQDRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVILK 591 >UniRef50_C5FG79 Hrq1p n=1 Tax=Microsporum canis CBS 113480 RepID=C5FG79_NANOT Length = 1137 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 67/382 (17%) Query: 46 HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNL 105 + +V T SGK+L +Y + L E K SR +YI P KAL D +R++ Sbjct: 347 NVIVSTSTSSGKSL---IYQVPML--------HELEKNPHSRGMYIFPTKALAQDQRRSM 395 Query: 106 QIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML--- 162 L + E ++ V GDTP R+ + R+ I+ T P+ L+L + Sbjct: 396 LDMLPYM--------EGMEHIMVETFDGDTPMANRNAI-RDEARIIFTNPDILHLTILPH 446 Query: 163 TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL----HTSAQRIGLSATVR 218 S R L+ ++ V++DE+H G G+H+AL + RL + ++ + + SATV Sbjct: 447 ESLWRVFLKNLKYVVVDELHVYNGL-FGSHVALIMRRLRRVCASIGNSDVKFVSCSATVA 505 Query: 219 S-ASDVAAFLGGDRP--VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREG 275 + + A G D+ + P+ R + VP + +D SS S E+S Sbjct: 506 NPEQHMKAIFGVDKVKLTDIDGSPSGRKEYLCWQVPFKDSNDPSSGRSSGIEES-----A 560 Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES 335 I+ + +LR I F R E L + + L RS DA+ F Sbjct: 561 RIFCQL-------ILRGVRVIAFCRIRKQCEYLLNAVKREFRT-LDRS-----DASRF-- 605 Query: 336 TSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVD 395 + G S + R E+ + G+L +VAT++LELG+D+G++D Sbjct: 606 ----------------VMGYRGGYSPQDRRKIEREMFEGKLLGIVATNALELGVDIGSLD 649 Query: 396 LVIQVATPLSVASGLQRIGRAG 417 VI P S+++ Q+ GRAG Sbjct: 650 AVITHEFPHSISNFRQQSGRAG 671 >UniRef50_A4RYF7 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RYF7_OSTLU Length = 815 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 112/397 (28%), Positives = 175/397 (44%), Gaps = 80/397 (20%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 +H +V + T SGK++ + ++ L + T+ LY+ P KAL D R Sbjct: 78 KHVIVASGTASGKSVCYNVPTIETLLAD-----------PTATALYMFPTKALAQDQLRA 126 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL-MLT 163 L+ L I R E E +G+ GD R+++ N ++IT P+ L++ ML Sbjct: 127 LRNILSNIP-----RSE-ETVFEIGMYDGDVREDARTEVRENA-RLIITNPDMLHVSMLP 179 Query: 164 SRAR--ETLRGVETVIIDEVHAVAGSKRGAHLALSLERL----DALLHTSAQRIGLSATV 217 S L G+ V++DE HA +G G+H+AL + RL L +S Q I SATV Sbjct: 180 SHKAWARVLSGLRYVVVDEAHAYSGVF-GSHVALIIRRLRRLCSELYGSSPQFIISSATV 238 Query: 218 RSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS----------GTGE 267 + + A L G V HP+ ++ V N V + G + Sbjct: 239 ANPLEHARDLIGYDGV---------HPERDVIEAVTNDGAPRGVKTFLLWNPMLKPGQSK 289 Query: 268 DSHAGREGSIWPYIETGILDEVLRHR-STIVFTNSRGLAEKLTARLNELYAARLQRS--P 324 ++ R+ + +L E ++H + F +R L E L +Y + RS P Sbjct: 290 QTNTERK-----FRRETLLAECVQHNLRCLAFCKTRKLCE-----LVLVYTREILRSSAP 339 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 +A A + G + E+RAI E+ L SG L V T++ Sbjct: 340 HLADKVASYRG---------------------GYEAIERRAI-EKELFSGVLLGVATTNA 377 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 LELGID+G++D+ + + P SVAS Q+ GRAG + G Sbjct: 378 LELGIDVGSLDVTLHLGFPGSVASLWQQAGRAGRREG 414 >UniRef50_Q9YFQ8 Putative ski2-type helicase n=1 Tax=Aeropyrum pernix RepID=HELS_AERPE Length = 735 Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 108/404 (26%), Positives = 169/404 (41%), Gaps = 72/404 (17%) Query: 34 QPQTWHVAA---RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILY 90 +PQ + A + E+ +V APTGSGKT A + ++ L R GG R Y Sbjct: 30 EPQYMALQAGVEKGENLVVAAPTGSGKTFIALVAIVNSLARAGG------------RAFY 77 Query: 91 ISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPD- 149 + P+K++ + + I + + L++ I GD PP+ Sbjct: 78 LVPLKSVAYEKYTSFSIL-------------SRMGLKLKISVGD--------FREGPPEA 116 Query: 150 -ILITTPESLYLMLTSRARETL-RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS 207 ++I T E +L R +L R V +I+DE+H+V+ KRG L + R+ A Sbjct: 117 PVVIATYEKFDSLL--RVSPSLARNVSVLIVDEIHSVSDPKRGPILESIVSRMLA-SAGE 173 Query: 208 AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH---PQIRIVVPVANMDDVSSVASG 264 AQ +GLSATV +A ++A ++GG + P +R + ++ P + +V V Sbjct: 174 AQLVGLSATVPNAGEIAEWIGGKIVESSWRPVPLREYVFKEYKLYSPTGGLREVPRVYGL 233 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 D A IE G +VFT SR A L R + RL S Sbjct: 234 YDLDLAA-------EAIEDG--------GQALVFTYSRRRAVTLAKRAAKRLGRRLS-SR 277 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARS---HHGSVSKEQRAITEQALKSGELRCVVA 381 V +A GA + + IA HH + R E+A ++G ++ V + Sbjct: 278 EARVYSAEASRAEGAPRSVAEELASLIAAGIAYHHAGLPPSLRKTVEEAFRAGAVKVVYS 337 Query: 382 TSSLELGIDMGAVDLVIQ--------VATPLSVASGLQRIGRAG 417 T +L G+++ A +VI P+ VA Q GRAG Sbjct: 338 TPTLAAGVNLPARRVVIDSYYRYEAGFREPIRVAEYKQMAGRAG 381 >UniRef50_A7IB61 Putative ski2-type helicase n=5 Tax=Methanomicrobiales RepID=HELS_METB6 Length = 723 Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 101/397 (25%), Positives = 174/397 (43%), Gaps = 87/397 (21%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 ++ LV PT SGKTL A + A+ R GG + LYI P+KAL + ++ Sbjct: 40 KNLLVAIPTASGKTLIAEM-AMHRHIANGG------------KCLYIVPLKALAS--EKY 84 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 + KG+ +VG+ TGD ++ + L +N DI++ T E + +L + Sbjct: 85 EEFGNKGV--------------KVGLSTGDLDRRDDA-LGKN--DIIVATSEKVDSLLRN 127 Query: 165 RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVA 224 AR + + V+IDE+H + RG L + + ++ + + Q IGLSAT+ + +A Sbjct: 128 GAR-WIPDITLVVIDEIHLIDSPDRGPTLEMVIAKMRS-KNPGMQLIGLSATIGNPKVLA 185 Query: 225 AFLGGDRPVTVVNPPAMRH-----------PQIRIVVPVA-NMDDVSSVASGTGEDSHAG 272 +L + + P +R ++R V V+ N DD++ Sbjct: 186 GWLDAELVTSSWRPVDLRQGVFYDNRIQFAERMRPVKQVSKNYDDLNLC----------- 234 Query: 273 REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH 332 LD + +VF +SR AE R AA +S A+ A Sbjct: 235 -------------LDTIAEGGQCLVFVSSRRNAEAFAKR-----AAGAIKSEDAALAACA 276 Query: 333 FESTSGATSNRVQSSDVFIARS---HHGSVSKEQRAITEQALKSGELRCVVATSSLELGI 389 G + V++ +A+ HH +S+++R+I E+A + L+C+ +T +L G+ Sbjct: 277 ERLLEGTPTEMVKTLAACVAKGAAFHHAGLSRKERSIVEEAFRKNLLKCISSTPTLAAGL 336 Query: 390 DMGAVDLVIQVATPLSVASGLQRI---------GRAG 417 ++ A ++I+ S G+Q I GRAG Sbjct: 337 NLPARRVIIRDYLRFSAGEGMQPIPVSEYRQMAGRAG 373 >UniRef50_A8TGW0 DEAD/DEAH box helicase domain protein n=2 Tax=Methanococcus voltae RepID=A8TGW0_METVO Length = 872 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 97/380 (25%), Positives = 160/380 (42%), Gaps = 61/380 (16%) Query: 37 TWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKA 96 T + + ++ ++ PT SGKTL + ++ + E + + L+I P+KA Sbjct: 21 TEGILEKDKNFIISIPTASGKTLIGEMAFINHVL-ENSPKNELGYIPSGKKALFIVPLKA 79 Query: 97 LGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPE 156 L T+ DE R + + L++GI GD ++E L+R DI+I T E Sbjct: 80 LATEK-----------FDEFREK-YNKFGLKIGISIGDYDSKEN--LSR--YDIIIMTSE 123 Query: 157 SLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSAT 216 L ++ + L V VIIDE+H + +RG L + L +L L Q IGLSAT Sbjct: 124 KLDSLMRKKNTTWLNDVSVVIIDEIHLLGDKERGGTLEIVLTKLKML---PIQIIGLSAT 180 Query: 217 VRSASDVAAFLGGD------RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSH 270 + ++ ++A +L RPV + + HP V ++D V GE+ Sbjct: 181 IGNSEELANWLDAKLVVDTWRPVEL--KKGLYHPD-ENKVNYYTIEDYKVVNGENGENKQ 237 Query: 271 A---GREGSIWPYIETGILDEVLRHRSTIVFTNSR----------GLAEKLT----ARLN 313 GS I I+D V S +VF +S+ LA+ LT LN Sbjct: 238 IKPLKNFGSSKSEISNLIVDCVKNSGSCLVFCSSKRNAVSEAKKNDLAKYLTNDEQGELN 297 Query: 314 ELYAARLQ--RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L + L PS T S ++ F HH ++ +QR + E+ Sbjct: 298 NLSSEILNVLEKPS---------KTCEQLSECIKKGVAF----HHAGLAMKQRKLVEEGF 344 Query: 372 KSGELRCVVATSSLELGIDM 391 + ++ + T +L G+++ Sbjct: 345 RKRIIKVICCTPTLSAGLNL 364 >UniRef50_A6LY55 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridiales RepID=A6LY55_CLOB8 Length = 887 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 126/505 (24%), Positives = 203/505 (40%), Gaps = 84/505 (16%) Query: 34 QPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISP 93 Q + + A + ++ T SGKTL+ L + +E +R ++I P Sbjct: 47 QAEMFEKAMDRNNIVITTSTASGKTLSFLLPVI-----------QEILSNPLARAIFIYP 95 Query: 94 IKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILIT 153 KAL +D R + L+ R + G+ GDTP ERS++ +N +I++T Sbjct: 96 TKALASDQYRAILPYLEYFGSNR---------ISAGVYDGDTPVNERSRIRKN-ANIILT 145 Query: 154 TPESLYLMLTSRARE-----TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL---H 205 PE + + ++ ++IDE+H G+ G+HLA RL + + Sbjct: 146 NPEMINAAFLPNHSKFGFDFIFSNLKYIVIDELHTYRGA-FGSHLANVFRRLGRVCRYYN 204 Query: 206 TSAQRIGLSATVRSASDVAAFLGGDRPVTVV--NPPAMRHPQIRIVVPVANMDDVSSVAS 263 +S Q + SAT+ + ++A + G + + V PA + ++V P M Sbjct: 205 SSPQYLCSSATIANPVELAEEICGHKFLEVCMDGSPAPK-KNYKLVQPPKIM-------- 255 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS 323 G D + I D V S I F SR E + L AR Sbjct: 256 --GHDKKYYGQVQSTSVAADLIPDLVENDNSFIAFAKSRRNVEVV------LKEAR---- 303 Query: 324 PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 D E+ GA+ S + G + +R E + +G LR +V+T+ Sbjct: 304 -----DKLETENFFGASLKDKIS-------GYRGGYTPLERKEIENKMITGVLRGLVSTN 351 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV 443 +LELGID+G +D + V P + AS Q+ GRAG + L D A+ Sbjct: 352 ALELGIDIGKIDTTVIVGYPGTRASFWQQSGRAGRNGKESTNYLILDNLPFDQY-IAINP 410 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL----PRRV 499 + +F EN N L + AAAA L +D+ + + DL P + Sbjct: 411 DWLFESGSENAVIDKNNLLIELAHIRAAAAEIPLTLDD-------ISIFPDLGETIPVLI 463 Query: 500 FDATLDMLSGR-------YPSGDFS 517 + L SG+ +P+GDFS Sbjct: 464 RASELTNQSGKFAWCGNSFPAGDFS 488 >UniRef50_C0VRF7 ATP-dependent helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VRF7_9CORY Length = 742 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 109/390 (27%), Positives = 175/390 (44%), Gaps = 85/390 (21%) Query: 41 AARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTD 100 A E+ ++ T SGK+LA L L R+ ++ G + LY++P KAL TD Sbjct: 67 AHDGENVVISTGTSSGKSLAYLLPILTRMAKQEG-----------ATALYLTPTKALATD 115 Query: 101 VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY- 159 RN+ ++G G + VN GDTP QE + R + T P+ L+ Sbjct: 116 QIRNVNAIIRGA-------GISGVNPNA--YDGDTP-QEVRRAVREMSRFIFTNPDMLHQ 165 Query: 160 LMLTSRARET--LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL-HTSAQRIGLSAT 216 +L AR + LR + V+IDE H+ G GAH++ + R LL H A + ++A+ Sbjct: 166 AILPDHARWSRFLRRLAFVVIDECHSYRGVF-GAHMSQVMWRFQRLLAHYGATPVFIAAS 224 Query: 217 VRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV-------ANMDDVSSVASGTGEDS 269 T +P A H + VPV A + +++ GE++ Sbjct: 225 A----------------TAADPGA--HAARLLGVPVRAITRDGAPRGERTTILWTPGEET 266 Query: 270 HAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE--LYAARLQRSPSIA 327 A E + +I + +L E LR T+ F SR AE + + E L + R + + +A Sbjct: 267 SATTEAA---HIMSVLLSEGLR---TLTFVRSRRAAETVAMQCGEELLRSGRTEEAKRVA 320 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 A G +++++R + E+ L +GE+ + T++LEL Sbjct: 321 AYRA-------------------------GYLAEDRRRL-ERQLDTGEIIGLATTNALEL 354 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 GID+G +D VI P ++AS Q+ GRAG Sbjct: 355 GIDVGGLDAVITTGFPGTIASFTQQAGRAG 384 >UniRef50_D0MXB7 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MXB7_PHYIN Length = 818 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 112/426 (26%), Positives = 183/426 (42%), Gaps = 75/426 (17%) Query: 28 KQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSR 87 KQ + Q + R E+A++ T SGK+LA + L+ L + +R Sbjct: 48 KQLYSHQFEAVEAILRGENAVLSTATASGKSLAFNVPMLEMLLED-----------PNAR 96 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR-TGDTPAQERSKLTRN 146 +Y+ P KAL D ++L RR G ++ L +G GDTP + RS + R Sbjct: 97 FMYLFPTKALAQDQLKSL----------RRFMGAADLPLHLGATFDGDTPMKSRSMVIRE 146 Query: 147 PPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLAL---SLERL 200 L T P+ L+L + + ++ L + +++DE H G G+H++ L RL Sbjct: 147 TRAFL-TNPDMLHLTILPQHKQWKHVLSNLRLLVVDEAHMYRGV-FGSHVSCVFRRLFRL 204 Query: 201 DALLHTSAQRIGLSATVRSASDVAAF-------------LGGDRPVTV----VNPPAMRH 243 AL ++ Q + SAT+++ A F L +R + PP + Sbjct: 205 CALYGSNPQVVCCSATIQNPE--AHFRQLIPALPRQPMSLSRERADATREEEMGPPNLHF 262 Query: 244 PQIRIVVPVANMDDVSSVAS------------GTGEDSHAGREGSIWPYIETGILDEVLR 291 + R + V D SV +S G+ S +T ++ + Sbjct: 263 FRQR-PLKVITEDGAPSVEKLFCIWNPEMAKMSCSINSQQGKSPS-----QTAVVSK--- 313 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFI 351 +T ++ SR LA + A + L R ++ + + H S S+ + + Sbjct: 314 -SATAIYQGSRILARLVEAEIATLLFCRGRKLTELVLMNVH----SALKSDPRTQNLLRR 368 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ 411 S+ G + E R EQ L G+L VVAT++LELGID+G +D I + P S+AS Q Sbjct: 369 VSSYRGGYTLEARRRIEQRLFRGDLLGVVATNALELGIDIGELDCTIHLGLPSSIASLWQ 428 Query: 412 RIGRAG 417 + GRAG Sbjct: 429 QAGRAG 434 >UniRef50_Q8TH00 Predicted Superfamily II helicase n=1 Tax=Methanopyrus kandleri RepID=Q8TH00_METKA Length = 711 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 101/359 (28%), Positives = 162/359 (45%), Gaps = 51/359 (14%) Query: 45 EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRN 104 E+ L+ APT SGKTL A + AL L GE +R++Y+ P +AL R Sbjct: 46 ENLLIAAPTASGKTLLAEMRALHELIESHGE----------TRVVYVVPFRALA----RE 91 Query: 105 LQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS 164 L + + R +G + + I TGD R + P I +TT E L L S Sbjct: 92 KYEELTNVIEFCREKG---LEPTIEISTGDV----RRPIRELRPGITVTTAEKLDASLRS 144 Query: 165 RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRI---GLSATVRSAS 221 R + V+ +++DEVH V RGA + E L AL+ T +++ LSATV +A Sbjct: 145 RP-SLVEEVDLLVLDEVHIVGDRNRGA----TYEALIALVRTFREKVSLLALSATVGNAE 199 Query: 222 DVAAFLGGDRPVTVVNPPAMRHPQIRIV-VPVANMDDVSSVASGTGEDSHAGREGSIWPY 280 ++A +L ++ P + H RIV VP A+ D + V + G + ++ Y Sbjct: 200 ELADWLDATPVISDWRPVKLEH---RIVEVPSASEKD-AKVRKLIRKCLREGGQALVFLY 255 Query: 281 IETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT 340 R R+ T ++ L+ ++ L+E L+ + E T Sbjct: 256 S---------RRRA---MTEAKNLSRTVSGLLSEDEKKELRTLAERVSELGEGEETE-IL 302 Query: 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 + V F HH ++ EQRA+ E A + G L+ VV+T +L G+++ A ++I+ Sbjct: 303 AYAVMRGVAF----HHAGLTAEQRALVEDAFREGLLKVVVSTPTLAAGVNLPARYVIIK 357 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Ent... 1959 0.0 UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteoba... 1603 0.0 UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterob... 1583 0.0 UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Coryne... 1544 0.0 UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinom... 1527 0.0 UniRef50_C8NN73 ATP-dependent helicase n=12 Tax=Corynebacterium ... 1521 0.0 UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomyceta... 1519 0.0 UniRef50_Q5Z170 Putative ATP-dependent DNA helicase n=3 Tax=Cory... 1517 0.0 UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium gluta... 1502 0.0 UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacter... 1498 0.0 UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomyceta... 1494 0.0 UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Stre... 1464 0.0 UniRef50_C0XQ89 Lhr family helicase n=2 Tax=Corynebacterium RepI... 1451 0.0 UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrob... 1438 0.0 UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia... 1412 0.0 UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacter... 1411 0.0 UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brach... 1406 0.0 UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein... 1404 0.0 UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia... 1400 0.0 UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliang... 1393 0.0 UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=... 1389 0.0 UniRef50_D1C082 DEAD/H associated domain protein n=1 Tax=Xylanim... 1383 0.0 UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candi... 1380 0.0 UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerth... 1379 0.0 UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Ac... 1377 0.0 UniRef50_C4DG18 ATP dependent helicase, Lhr family n=1 Tax=Stack... 1377 0.0 UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalk... 1351 0.0 UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococ... 1342 0.0 UniRef50_D2QB27 ATP-dependent helicase lhr n=3 Tax=Bifidobacteri... 1339 0.0 UniRef50_A1A256 ATP-dependent helicase II n=4 Tax=Bifidobacteriu... 1336 0.0 UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytoc... 1327 0.0 UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinom... 1323 0.0 UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria Rep... 1296 0.0 UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Microco... 1288 0.0 UniRef50_Q67R22 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 1260 0.0 UniRef50_C0E805 Putative uncharacterized protein n=2 Tax=Coryneb... 1254 0.0 UniRef50_C6MZM9 DEAD/DEAH box helicase-like protein n=1 Tax=Legi... 1170 0.0 UniRef50_A6CAB6 DEAD/DEAH box helicase-like protein n=1 Tax=Plan... 1129 0.0 UniRef50_Q4K580 Lhr n=14 Tax=Proteobacteria RepID=Q4K580_PSEF5 1123 0.0 UniRef50_Q13M86 ATP-dependent helicase, DEAD/DEAH family n=5 Tax... 1121 0.0 UniRef50_Q2SEQ3 Lhr-like helicase n=1 Tax=Hahella chejuensis KCT... 1118 0.0 UniRef50_C8W110 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 1110 0.0 UniRef50_Q1IK30 DEAD/DEAH box helicase-like n=3 Tax=Bacteria Rep... 1108 0.0 UniRef50_C8RVX4 ATP-dependent DNA helicase (Fragment) n=2 Tax=Co... 1107 0.0 UniRef50_A3ZQS6 DEAD/DEAH box helicase n=1 Tax=Blastopirellula m... 1104 0.0 UniRef50_D2NPL8 Lhr-like helicase n=2 Tax=Rothia mucilaginosa Re... 1102 0.0 UniRef50_Q3BSA5 ATP-dependent DNA helicase Lhr n=12 Tax=Bacteria... 1100 0.0 UniRef50_C6CYT0 DEAD/DEAH box helicase domain protein n=1 Tax=Pa... 1099 0.0 UniRef50_D2QY58 DEAD/H associated domain protein n=1 Tax=Pirellu... 1084 0.0 UniRef50_D0WMV8 Putative DEAD/DEAH box helicase n=1 Tax=Actinomy... 1084 0.0 UniRef50_B5E8L0 DEAD/H associated domain protein n=1 Tax=Geobact... 1080 0.0 UniRef50_A4BMP7 Probable ATP-dependent DNA helicase n=1 Tax=Nitr... 1079 0.0 UniRef50_C1F8X5 Helicase, DEAD/DEAH domain protein n=1 Tax=Acido... 1078 0.0 UniRef50_Q01U88 ATP dependent helicase, Lhr family n=1 Tax=Candi... 1074 0.0 UniRef50_B5JLM6 DEAD/H associated family n=1 Tax=Verrucomicrobia... 1050 0.0 UniRef50_D0LRM6 DEAD/H associated domain protein n=1 Tax=Haliang... 1048 0.0 UniRef50_A7H7C5 DEAD/H associated domain protein n=1 Tax=Anaerom... 1046 0.0 UniRef50_C5EPU4 Putative uncharacterized protein n=4 Tax=Clostri... 1036 0.0 UniRef50_B1FTZ8 DEAD/H associated domain protein n=2 Tax=Burkhol... 1031 0.0 UniRef50_A8RJ57 Putative uncharacterized protein n=1 Tax=Clostri... 1028 0.0 UniRef50_A9KJU0 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 1021 0.0 UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkho... 1011 0.0 UniRef50_B8J8Q2 DEAD/H associated domain protein n=3 Tax=Cystoba... 1001 0.0 UniRef50_A9GB61 Putative ATP-dependent helicase, N-terminal n=1 ... 983 0.0 UniRef50_D2L062 DEAD/DEAH box helicase domain protein n=2 Tax=De... 966 0.0 UniRef50_B3DRA3 Lhr-like helicase n=11 Tax=Bacteria RepID=B3DRA3... 964 0.0 UniRef50_A0LV08 DEAD/H associated domain protein n=1 Tax=Acidoth... 915 0.0 UniRef50_D2MKC9 DEAD/H associated domain protein n=1 Tax=Candida... 906 0.0 UniRef50_D1NRV9 ATP-dependent helicase II n=1 Tax=Bifidobacteriu... 897 0.0 UniRef50_D2LLH6 DEAD/H associated domain protein n=3 Tax=Aciduli... 840 0.0 UniRef50_Q8U202 Large helicase-related protein n=3 Tax=Thermococ... 805 0.0 UniRef50_C5AJ01 DEAD/H associated domain protein n=1 Tax=Burkhol... 800 0.0 UniRef50_C5U8C6 DEAD/H associated domain protein n=1 Tax=Methano... 778 0.0 UniRef50_Q57742 Uncharacterized ATP-dependent helicase MJ0294 n=... 773 0.0 UniRef50_C7DIU9 DEAD/H associated domain protein n=1 Tax=Candida... 773 0.0 UniRef50_O27830 Uncharacterized ATP-dependent helicase MTH_1802 ... 763 0.0 UniRef50_Q6L0N7 ATP-dependent helicase n=1 Tax=Picrophilus torri... 756 0.0 UniRef50_A5UKH9 ATP-dependent helicase, Lhr-like protein n=5 Tax... 754 0.0 UniRef50_UPI0000F5176A ATP-dependent helicase n=1 Tax=Ferroplasm... 751 0.0 UniRef50_Q0W5W5 Lhr-like RNA helicase n=12 Tax=Euryarchaeota Rep... 739 0.0 UniRef50_B3T6F6 Putative DEAD/DEAH box helicase n=1 Tax=uncultur... 705 0.0 UniRef50_D2EED6 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 699 0.0 UniRef50_D2RXL5 DEAD/H associated domain protein n=5 Tax=Halobac... 681 0.0 UniRef50_Q18G68 Lhr-like helicase n=2 Tax=Halobacteriaceae RepID... 669 0.0 UniRef50_Q0W7D8 ATP-dependent RNA helicase n=3 Tax=Euryarchaeota... 650 0.0 UniRef50_Q46BX9 ATP-dependent RNA helicase n=4 Tax=Methanosarcin... 647 0.0 UniRef50_UPI0001745EC8 large helicase-related protein (lhr-2) n=... 630 e-178 UniRef50_A8MBG3 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 625 e-177 UniRef50_Q649R1 ATP-dependent helicase n=4 Tax=environmental sam... 621 e-176 UniRef50_B4D6Q0 DEAD/H associated domain protein n=1 Tax=Chthoni... 621 e-176 UniRef50_C1RMK0 Lhr-like helicase n=1 Tax=Cellulomonas flavigena... 610 e-172 UniRef50_B1Y9J8 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 609 e-172 UniRef50_B5ICF6 DEAD/DEAH box helicase domain protein n=2 Tax=Ac... 588 e-166 UniRef50_Q11PA5 ATP-dependent helicase n=2 Tax=Sphingobacteriale... 586 e-165 UniRef50_B1L6H5 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 584 e-164 UniRef50_O29116 Large helicase-related protein (Lhr-1) n=2 Tax=A... 582 e-164 UniRef50_B1ZZM6 DEAD/H associated domain protein n=1 Tax=Opitutu... 581 e-164 UniRef50_A4CH41 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 579 e-163 UniRef50_A8M9R8 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 578 e-163 UniRef50_A1RT46 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 574 e-162 UniRef50_C5A764 ATP-dependent helicase, lhr-like protein (Lhr) n... 574 e-161 UniRef50_D2RFY4 DEAD/DEAH box helicase domain protein n=1 Tax=Ar... 572 e-161 UniRef50_Q6MCM6 Putative uncharacterized protein n=1 Tax=Candida... 570 e-160 UniRef50_Q1QRK7 DEAD/DEAH box helicase-like n=6 Tax=Alphaproteob... 568 e-160 UniRef50_B6YWG2 Large helicase-related protein n=1 Tax=Thermococ... 565 e-159 UniRef50_D2EE81 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 565 e-159 UniRef50_Q1YKM0 ATP-dependent helicase n=2 Tax=Aurantimonas mang... 563 e-158 UniRef50_C7DIA3 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 561 e-158 UniRef50_B9LRP7 DEAD/DEAH box helicase domain protein n=7 Tax=Ha... 558 e-157 UniRef50_A2BMA9 DEAD/DEAH box helicase n=1 Tax=Hyperthermus buty... 556 e-156 UniRef50_Q3IP60 Lhr-like helicase n=5 Tax=Halobacteriaceae RepID... 556 e-156 UniRef50_A3CUY2 DEAD/DEAH box helicase domain protein n=5 Tax=Me... 555 e-156 UniRef50_A9A127 DEAD/DEAH box helicase domain protein n=2 Tax=Th... 552 e-155 UniRef50_Q0C4L0 ATP-dependent helicase, DEAD/DEAH family n=6 Tax... 550 e-154 UniRef50_Q3AJL5 DEAD/DEAH box helicase-like n=17 Tax=Cyanobacter... 547 e-153 UniRef50_C3NGE7 DEAD/DEAH box helicase domain protein n=12 Tax=S... 546 e-153 UniRef50_Q2IR64 DEAD/DEAH box helicase n=81 Tax=Alphaproteobacte... 544 e-152 UniRef50_A8AC71 DEAD/DEAH box helicase domain protein n=1 Tax=Ig... 544 e-152 UniRef50_Q7UX43 Putative ATP-dependent helicase n=1 Tax=Rhodopir... 538 e-151 UniRef50_A8A8X3 DEAD/DEAH box helicase domain protein n=1 Tax=Ig... 538 e-151 UniRef50_B4RRM3 ATP-dependent RNA helicase, DEAD/DEAH box family... 533 e-149 UniRef50_C6Y055 DEAD/H associated domain protein n=7 Tax=Bactero... 530 e-148 UniRef50_Q470G5 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 525 e-147 UniRef50_Q3JLU0 ATP-dependent helicase, DEAD/DEAH family n=75 Ta... 521 e-146 UniRef50_Q167Y6 ATP-dependent helicase, DEAD/DEAH box family n=2... 518 e-145 UniRef50_B6YUR4 Large helicase-related protein n=5 Tax=Euryarcha... 515 e-144 UniRef50_C5CN99 DEAD/H associated domain protein n=9 Tax=Proteob... 510 e-142 UniRef50_Q1CZG3 ATP-dependent helicase, DEAD/DEAH box family n=5... 510 e-142 UniRef50_Q0BTQ2 ATP-dependent helicase n=27 Tax=Alphaproteobacte... 509 e-142 UniRef50_Q6KZS3 ATP-dependent RNA helicase n=4 Tax=Thermoplasmat... 504 e-140 UniRef50_D0DB43 Dead/H associated domain protein n=4 Tax=Alphapr... 501 e-139 UniRef50_Q8TGY8 Lhr-like Superfamily II helicase n=1 Tax=Methano... 500 e-139 UniRef50_A4YHK3 DEAD/DEAH box helicase domain protein n=12 Tax=S... 491 e-137 UniRef50_A1RYY4 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 483 e-134 UniRef50_A1TJ45 DEAD/H associated domain protein n=5 Tax=Comamon... 464 e-128 UniRef50_A3DN94 DEAD/DEAH box helicase domain protein n=1 Tax=St... 461 e-127 UniRef50_B8D5X5 DEAD/DEAH box helicase domain protein n=1 Tax=De... 459 e-127 UniRef50_Q9Y9V1 Putative ATP-dependent helicase n=1 Tax=Aeropyru... 457 e-126 UniRef50_A2BLG2 ATP dependent helicase n=1 Tax=Hyperthermus buty... 453 e-125 UniRef50_C5RNG9 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 414 e-113 UniRef50_C5CE86 DEAD/DEAH box helicase domain protein n=1 Tax=Ko... 390 e-106 UniRef50_C4FYH2 Putative uncharacterized protein n=1 Tax=Abiotro... 383 e-104 UniRef50_B2A401 DEAD/DEAH box helicase domain protein n=6 Tax=Fi... 382 e-104 UniRef50_O26412 ATP-dependent helicase n=1 Tax=Methanothermobact... 380 e-103 UniRef50_A1BIJ8 DEAD/DEAH box helicase domain protein n=1 Tax=Ch... 374 e-101 UniRef50_D2BWD9 DEAD/DEAH box helicase domain protein n=6 Tax=Ga... 373 e-101 UniRef50_Q2SGL4 Lhr-like helicase n=5 Tax=Bacteria RepID=Q2SGL4_... 370 e-100 UniRef50_Q24ZT1 Putative uncharacterized protein n=1 Tax=Desulfi... 367 2e-99 UniRef50_A1RZW9 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 365 6e-99 UniRef50_B8I966 DEAD/DEAH box helicase domain protein n=8 Tax=ce... 364 1e-98 UniRef50_A1VV81 DEAD/DEAH box helicase domain protein n=1 Tax=Po... 363 3e-98 UniRef50_B8JFR7 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 363 4e-98 UniRef50_A9WLQ1 ATP-dependent helicase n=3 Tax=Micrococcaceae Re... 363 4e-98 UniRef50_A7IB28 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 362 6e-98 UniRef50_A2SRH6 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 361 1e-97 UniRef50_D0LTA5 3'-5' exonuclease n=2 Tax=Haliangium ochraceum D... 357 2e-96 UniRef50_C7PFC4 DEAD/DEAH box helicase domain protein n=2 Tax=Ch... 356 4e-96 UniRef50_B8GFB2 DEAD/DEAH box helicase domain protein n=1 Tax=Me... 355 9e-96 UniRef50_B4SBA5 DEAD/DEAH box helicase domain protein n=1 Tax=Pe... 354 1e-95 UniRef50_Q74ZT5 AGR113Wp n=3 Tax=cellular organisms RepID=Q74ZT5... 352 6e-95 UniRef50_A9F615 ATP-dependent helicase n=1 Tax=Sorangium cellulo... 350 2e-94 UniRef50_B2JHB8 DEAD/DEAH box helicase domain protein n=11 Tax=P... 350 2e-94 UniRef50_C6IVI9 DEAD/DEAH box helicase domain-containing protein... 349 6e-94 UniRef50_C1YNJ7 Putative uncharacterized protein n=1 Tax=Nocardi... 348 8e-94 UniRef50_C0WD26 DEAD/DEAH helicase n=13 Tax=Bacteria RepID=C0WD2... 344 2e-92 UniRef50_B5IHC0 DEAD/DEAH box helicase domain protein (Fragment)... 342 9e-92 UniRef50_Q049S7 Lhr-like helicase n=12 Tax=Bacteria RepID=Q049S7... 342 9e-92 UniRef50_A4BLZ4 Lhr-like helicase n=1 Tax=Nitrococcus mobilis Nb... 342 1e-91 UniRef50_P32639 Pre-mRNA-splicing helicase BRR2 n=6 Tax=Saccharo... 340 2e-91 UniRef50_A6QZE8 Putative uncharacterized protein n=1 Tax=Ajellom... 338 1e-90 UniRef50_C7RDI1 DEAD/DEAH box helicase domain protein n=3 Tax=An... 337 3e-90 UniRef50_Q9UT24 Pre-mRNA-splicing factor brr2 n=5 Tax=Fungi/Meta... 335 9e-90 UniRef50_B0C714 DEAD/DEAH box RNA helicase n=1 Tax=Acaryochloris... 334 2e-89 UniRef50_A4FJZ7 Putative ATP-dependent helicase n=1 Tax=Saccharo... 332 6e-89 UniRef50_A4TAT7 DEAD/DEAH box helicase domain protein n=4 Tax=Ac... 332 1e-88 UniRef50_C4QXA9 RNA-dependent ATPase RNA helicase (DEIH box) n=1... 331 2e-88 UniRef50_B5CL83 Putative uncharacterized protein n=4 Tax=Clostri... 331 2e-88 UniRef50_D0NTD6 Pre-mRNA-splicing helicase BRR2, putative n=1 Ta... 330 3e-88 UniRef50_C5DN54 KLTH0G14278p n=1 Tax=Lachancea thermotolerans CB... 330 4e-88 UniRef50_Q2GRG2 Putative uncharacterized protein n=1 Tax=Chaetom... 328 9e-88 UniRef50_Q6BI73 DEHA2G12892p n=7 Tax=Saccharomycetaceae RepID=Q6... 328 1e-87 UniRef50_B9WF65 Pre-mRNA-splicing helicase, putative n=4 Tax=Can... 327 2e-87 UniRef50_D0LS76 DEAD/DEAH box helicase domain protein n=1 Tax=Ha... 327 3e-87 UniRef50_C0NG17 Pre-mRNA-splicing factor brr2 n=3 Tax=Leotiomyce... 326 4e-87 UniRef50_O75643 U5 small nuclear ribonucleoprotein 200 kDa helic... 326 5e-87 UniRef50_D2RJD3 DEAD/DEAH box helicase domain protein n=1 Tax=Ac... 325 7e-87 UniRef50_Q55CI8 Activating signal cointegrator 1 complex subunit... 325 1e-86 UniRef50_D1TEQ3 Lhr-like helicase-like protein n=1 Tax=Burkholde... 323 4e-86 UniRef50_B5YNG2 RNA or DNA helicase n=1 Tax=Thalassiosira pseudo... 322 5e-86 UniRef50_D2UY12 U5 snRNP-specific spliceosomal protein n=1 Tax=N... 322 6e-86 UniRef50_C5DRW4 ZYRO0B11858p n=1 Tax=Zygosaccharomyces rouxii Re... 322 6e-86 UniRef50_Q9XWI1 Protein Y54E2A.4, partially confirmed by transcr... 322 1e-85 UniRef50_Q54G57 Activating signal cointegrator 1 complex subunit... 321 2e-85 UniRef50_B6A9C7 Sec63 domain-containing protein n=1 Tax=Cryptosp... 321 2e-85 UniRef50_B6H0I8 Pc12g14010 protein n=42 Tax=Saccharomyceta RepID... 321 2e-85 UniRef50_Q6FKF7 Strain CBS138 chromosome L complete sequence n=1... 320 3e-85 UniRef50_B2AQ90 Predicted CDS Pa_4_4960 n=1 Tax=Podospora anseri... 320 3e-85 UniRef50_D0NDF2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 320 4e-85 UniRef50_A5E7Q8 Putative uncharacterized protein n=1 Tax=Loddero... 320 4e-85 UniRef50_C4FC75 Putative uncharacterized protein n=1 Tax=Collins... 319 5e-85 UniRef50_B4ITW8 GE23129 n=1 Tax=Drosophila yakuba RepID=B4ITW8_D... 318 9e-85 UniRef50_B7G2L8 Predicted protein n=2 Tax=Eukaryota RepID=B7G2L8... 318 1e-84 UniRef50_B6KDV2 Sec63 domain-containing DEAD/DEAH box helicase, ... 317 2e-84 UniRef50_C4JI59 Potential translation-regulating helicase n=1 Ta... 314 2e-83 UniRef50_Q07GR1 ATP-dependent helicase, putative n=5 Tax=Alphapr... 314 2e-83 UniRef50_B8IW51 DEAD/DEAH box helicase domain protein n=2 Tax=Me... 313 3e-83 UniRef50_B6JWX3 Antiviral helicase SLH1 n=1 Tax=Schizosaccharomy... 313 3e-83 UniRef50_Q16RG8 ATP-dependent DNA helicase mer3 n=3 Tax=Culicini... 312 8e-83 UniRef50_Q675T1 Putative helicase n=1 Tax=Oikopleura dioica RepI... 311 2e-82 UniRef50_B7FQ60 Predicted protein (Fragment) n=2 Tax=Bacillariop... 311 2e-82 UniRef50_B2WF75 Activating signal cointegrator 1 complex subunit... 311 2e-82 UniRef50_Q47TW5 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 311 2e-82 UniRef50_Q5KBS7 RNA helicase, putative n=2 Tax=Agaricomycotina R... 310 2e-82 UniRef50_Q9FNQ1 RNA helicase n=14 Tax=Viridiplantae RepID=Q9FNQ1... 310 3e-82 UniRef50_A4QWU8 Putative uncharacterized protein n=1 Tax=Magnapo... 310 3e-82 UniRef50_O60072 Putative helicase mug81 n=1 Tax=Schizosaccharomy... 309 6e-82 UniRef50_Q7RHC8 Drosophila melanogaster CG5931 gene product-rela... 309 6e-82 UniRef50_B0EGZ1 U5 small nuclear ribonucleoprotein 200 kDa helic... 309 7e-82 UniRef50_Q5CRF5 U5snrp Brr2 SFII RNA helicase (Sec63 and the sec... 308 9e-82 UniRef50_Q8N3C0 Activating signal cointegrator 1 complex subunit... 308 1e-81 UniRef50_C5FL91 ATP-dependent DNA helicase MER3 n=1 Tax=Microspo... 308 1e-81 UniRef50_C6H1C9 Activating signal cointegrator 1 complex subunit... 308 1e-81 UniRef50_A7AW09 Helicase, putative n=2 Tax=Eukaryota RepID=A7AW0... 308 2e-81 UniRef50_C8S8J7 DEAD/DEAH box helicase domain protein n=3 Tax=Ar... 307 2e-81 UniRef50_Q02AZ8 DEAD/DEAH box helicase domain protein n=3 Tax=Ba... 307 2e-81 UniRef50_C1ZM72 Lhr-like helicase n=1 Tax=Planctomyces limnophil... 307 2e-81 UniRef50_B8FB49 DEAD/DEAH box helicase domain protein n=1 Tax=De... 307 2e-81 UniRef50_Q9VF56 CG5205 n=16 Tax=Coelomata RepID=Q9VF56_DROME 306 3e-81 UniRef50_A2DN52 Type III restriction enzyme, res subunit family ... 306 3e-81 UniRef50_B8YFQ3 Meiotic helicase n=2 Tax=Sordaria macrospora Rep... 306 4e-81 UniRef50_B6HP67 Pc22g02150 protein n=1 Tax=Penicillium chrysogen... 306 4e-81 UniRef50_D1H2W4 Whole genome shotgun sequence of line PN40024, s... 305 6e-81 UniRef50_D2VZX0 Dead box RNA helicase n=1 Tax=Naegleria gruberi ... 305 7e-81 UniRef50_D2A5P4 Putative uncharacterized protein GLEAN_15573 n=2... 305 9e-81 UniRef50_C0QU99 ATP-dependent rna helicase, dead/deah box family... 305 1e-80 UniRef50_C5LWR0 U520, putative n=2 Tax=Perkinsus marinus ATCC 50... 305 1e-80 UniRef50_O73946 Putative ski2-type helicase n=3 Tax=Pyrococcus R... 304 2e-80 UniRef50_B4N718 GK23638 n=1 Tax=Drosophila willistoni RepID=B4N7... 304 2e-80 UniRef50_A1DP28 DEAD/DEAH box DNA helicase (Mer3), putative n=7 ... 303 3e-80 UniRef50_Q4UHC2 DEAD-box helicase, putative n=2 Tax=Theileria Re... 303 4e-80 UniRef50_B8N1Z3 DEAD/DEAH box DNA helicase (Mer3), putative n=2 ... 303 5e-80 UniRef50_A6LY55 DEAD/DEAH box helicase domain protein n=2 Tax=Cl... 303 5e-80 UniRef50_C4QQ45 U520, putative n=5 Tax=Bilateria RepID=C4QQ45_SCHMA 302 6e-80 UniRef50_B0EE60 U5 small nuclear ribonucleoprotein 200 kDa helic... 302 6e-80 UniRef50_B6YXM0 DNA helicase n=5 Tax=Thermococcus RepID=B6YXM0_T... 302 9e-80 Sequences not found previously or not previously below threshold: UniRef50_UPI0001791CD4 PREDICTED: similar to pre-mRNA-splicing h... 320 3e-85 UniRef50_Q6C0Y6 YALI0F20724p n=1 Tax=Yarrowia lipolytica RepID=Q... 317 2e-84 UniRef50_P50830 Uncharacterized ATP-dependent helicase yprA n=32... 311 2e-82 UniRef50_B6DMK2 Meiotic crossover 1 n=3 Tax=Oryza sativa RepID=B... 305 1e-80 UniRef50_UPI00006CB1FA Type III restriction enzyme, res subunit ... 302 6e-80 >UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Enterobacteriaceae RepID=LHR_ECOLI Length = 1538 Score = 1959 bits (5075), Expect = 0.0, Method: Composition-based stats. Identities = 1538/1538 (100%), Positives = 1538/1538 (100%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA Sbjct: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG Sbjct: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE Sbjct: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA Sbjct: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN Sbjct: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS Sbjct: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV Sbjct: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD Sbjct: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL Sbjct: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI Sbjct: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN Sbjct: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR Sbjct: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF Sbjct: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA Sbjct: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL Sbjct: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH Sbjct: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 Query: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV Sbjct: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 Query: 1021 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV Sbjct: 1021 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM Sbjct: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 Query: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH Sbjct: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 Query: 1201 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE 1260 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE Sbjct: 1201 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE 1260 Query: 1261 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN Sbjct: 1261 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 Query: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS Sbjct: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 Query: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP Sbjct: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 Query: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP Sbjct: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG Sbjct: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 >UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteobacteria RepID=Q6D6U1_ERWCT Length = 1598 Score = 1603 bits (4152), Expect = 0.0, Method: Composition-based stats. Identities = 901/1587 (56%), Positives = 1127/1587 (71%), Gaps = 68/1587 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ AT DWF+ F PTAVQ W H+LVIAPTGSGKTLAAF++A+DRLF E Sbjct: 16 FTTATLDWFVSQFGTPTAVQDAAWTAIGGGHHSLVIAPTGSGKTLAAFMHAIDRLFSEQV 75 Query: 75 EDTREAHKRKT-----SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + K +R+LYISP+KALG DVQRNL +PL+GI R+RRG+ V L VG Sbjct: 76 KAFTPDTKNARPRATKTRVLYISPVKALGADVQRNLSLPLQGIMQVRQRRGDANVVLTVG 135 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +RTGDT ER++L R PPDILITTPESL+LMLTSRARE LR V T+IIDE+HAVAG+KR Sbjct: 136 LRTGDTTTAERARLVRRPPDILITTPESLFLMLTSRAREALRDVSTIIIDEIHAVAGTKR 195 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G+HLALSLERLDALL T AQRIGLSATVR VA FLGG+RPVT+V PP+ RH +RIV Sbjct: 196 GSHLALSLERLDALLDTPAQRIGLSATVRPVERVAEFLGGERPVTIVAPPSSRHLDVRIV 255 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 VPV +M ++ GED+ GR GS+WP++E ILD+VL RSTIVF NSRG+ E+LT Sbjct: 256 VPVEDMSNIPE--PEHGEDAGTGRPGSVWPHVEASILDQVLSRRSTIVFANSRGVTERLT 313 Query: 310 ARLNELYAARLQRSPSIAVDA-----AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 ARLNE YAARL + A A +ES +G+T R ++ IARSHHGSVSKE R Sbjct: 314 ARLNEAYAARLAGAEQTASTADSSPSTQYESMAGSTQARSAGAETTIARSHHGSVSKEHR 373 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 A EQALKSGELRCVVATSSLELGIDMG VDLVIQV+ P SVAS LQR+GRAGHQVGG+S Sbjct: 374 AEIEQALKSGELRCVVATSSLELGIDMGLVDLVIQVSAPPSVASALQRVGRAGHQVGGMS 433 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 GL +PR+RRD++DSAVIV+ M GR+E + PP NPLDVLAQQTVAAAAM+ L VD WY+ Sbjct: 434 TGLVYPRSRRDVIDSAVIVDAMLNGRIEAIAPPRNPLDVLAQQTVAAAAMEPLDVDAWYA 493 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 V RA P++ LPR FDATLDML+GRYPS DFS FRP+LVW+RETG L+ARPGAQ LAVT Sbjct: 494 AVCRAGPYRTLPRTAFDATLDMLAGRYPSDDFSGFRPRLVWDRETGQLSARPGAQHLAVT 553 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 SGGTIPDRGM+SV+LPEGEE+AGSRRVGELDEEMVYESRVND+ITLGATSWRIQ+ITRDQ Sbjct: 554 SGGTIPDRGMFSVVLPEGEERAGSRRVGELDEEMVYESRVNDVITLGATSWRIQEITRDQ 613 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG-----------TIP 653 V+V PAPGRSARLPFWRG+G GRPAELGE IG FL L + + Sbjct: 614 VVVIPAPGRSARLPFWRGDGIGRPAELGEAIGAFLGQLEPDISGASSSPFPEPDTRTRLE 673 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + N I N+ L+ EQR ATG++P R L++ERCRDE+GDWR+ILHSPYGRR+HEPW Sbjct: 674 AIGLDGNAIGNMLALLSEQRAATGVLPTDRTLIIERCRDELGDWRLILHSPYGRRIHEPW 733 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 A+AIA RI W D +VV+SDDGIVAR PDT G++P A +FLF+P+KL + V AVG S Sbjct: 734 ALAIAQRIRERWKIDPAVVSSDDGIVARFPDT-GRVPGAELFLFDPDKLRRTVSVAVGGS 792 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 ALFAARFRECAARALL+ TPG R+PLWQQRLRA QLLE A+ YP+FP+++ET RECLQ Sbjct: 793 ALFAARFRECAARALLLARSTPGRRSPLWQQRLRAGQLLESARDYPEFPILIETARECLQ 852 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 DVYDL AL+ LMRRLN G +++ +VTT PSPFAT LLFGYVA+FMY++D P+AERRAS+ Sbjct: 853 DVYDLDALDELMRRLNTGSVRLVEVTTEVPSPFATDLLFGYVAQFMYETDVPMAERRASM 912 Query: 894 LSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTV 953 L+LDS LL LLG+V+ ELLDP V+ Q+++ELQRL G RAKG+EG+ DLLRELGP+ Sbjct: 913 LALDSTLLGELLGRVELSELLDPLVMTQLDQELQRLEVGYRAKGKEGVADLLRELGPLCT 972 Query: 954 EDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP 1013 +++A R ++E A++L +L + +R+ MI +E A ++DA RLRDALGV LP LP Sbjct: 973 QEVAARLDSEADEAAAFLNSLESGRRVIRVMIGAREHWASIEDAGRLRDALGVPLPVGLP 1032 Query: 1014 EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL--- 1070 +L + PLR L R+ R T A F LG ++VE L+Q+ EQG +++ Sbjct: 1033 AAFLESTADPLRSLIARFARTRGPFTTGDAASAFGLGASVVEAVLRQIAEQGKLLSGRFG 1092 Query: 1071 ------------------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQ 1112 Q+ WV DEVFRRLR+RSLQAAREAT+PV Y RLLLERQ Sbjct: 1093 VRRGMKSPPQVSGDAGPLAQNEWVGDEVFRRLRVRSLQAAREATQPVPRHAYTRLLLERQ 1152 Query: 1113 GVLPATDGSPALFA-STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSE 1171 G++ + S + +++ G EG +GV++VIEQLAG+ LPAS+WE ILPARVRDY+ + Sbjct: 1153 GLVADSSQSAVVKGWNSARGALEGPEGVLQVIEQLAGMPLPASVWERHILPARVRDYAPD 1212 Query: 1172 MLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPA--EADQANRSALQQAIVAV 1229 MLD LL++G V+WSG +LG DDGLVA HLQE+A E+ + + + + S LQ AI+ + Sbjct: 1213 MLDALLSSGTVLWSGHDRLGNDDGLVAFHLQEFAPETLSMSSHASGAPDMSPLQSAILEL 1272 Query: 1230 LADGGAWFAQQISQRIRDKIGE---------SVDLSALQEALWALVWQGVITSDIWAPLR 1280 L+DGGA+F +Q++ +++ + + + L ALW LVW G IT+D PLR Sbjct: 1273 LSDGGAYFVRQLAAQVQVTLAQEYSEQHGAPDILTDNLHTALWDLVWAGCITNDTLTPLR 1332 Query: 1281 ALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYN-----TPNLAGRWSLLQVEPLND 1335 AL + R S R R R + + VS LAGRWS+++ EPL D Sbjct: 1333 ALAQVVQQPRPRALSSRRRRGLRGLSSATVSEEFHSGLTALNATTLAGRWSMIRTEPLPD 1392 Query: 1336 TERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGA 1395 T + +A E +LDRY +++R + EN+PGGF ++Q + R MED+GR++RGRFV GLG A Sbjct: 1393 TVKAIAWTEGLLDRYAVVTRNVTVYENLPGGFAALQPVFRGMEDTGRVIRGRFVLGLGAA 1452 Query: 1396 QFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGAL 1455 QFAER T+DRLR+LA + T PVALSA DP N +G +LPWP+H + + P RR GA+ Sbjct: 1453 QFAERTTVDRLRELAEE--TTTIPMPVALSAVDPGNPFGTILPWPSHASLMRPARRTGAI 1510 Query: 1456 VVVSGGKLLLYLAQGGKKMLVWQEKEE----LLAPEVFHALTTALRREPRLRFTLTEVND 1511 VV+ GG L+ YL QGG+++ + + ++ AL+TAL R+ R RFTL VN Sbjct: 1511 VVIDGGHLVFYLPQGGRQLFTYIDPDDAAQTEAIAAALAALSTALSRDKRNRFTLELVNG 1570 Query: 1512 LPVRQTPMFTLLREAGFSSSPQGLDWG 1538 +PVR + + L+ GFSS+P+GL WG Sbjct: 1571 VPVRMSKLTPALKAIGFSSAPKGLYWG 1597 >UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterobacteriaceae RepID=C8Q5F9_9ENTR Length = 1525 Score = 1583 bits (4098), Expect = 0.0, Method: Composition-based stats. Identities = 901/1533 (58%), Positives = 1105/1533 (72%), Gaps = 28/1533 (1%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P T+ WF AF PT VQ + W A +++ LVIAPTGSGKTLAAFL+A+D LFRE Sbjct: 9 FLPTTQAWFRAAFAAPTPVQVEAWQAIASAKNCLVIAPTGSGKTLAAFLHAIDALFRERS 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + A K +RILYISP+KAL DVQRNLQ+PL G+ +RR++GE E+ L+VG+R+GD Sbjct: 69 QPATVARSHK-TRILYISPVKALAADVQRNLQLPLAGVEAQRRQQGEAEIALQVGMRSGD 127 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T + ER++L R PPDILITTPESL+LMLTS+ARETLRGV TVI+DEVHAVAGSKRG+HLA Sbjct: 128 TRSAERAQLQRRPPDILITTPESLFLMLTSKARETLRGVSTVIVDEVHAVAGSKRGSHLA 187 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL AQRIGLSATVR VA FLGG VVNP A R Q+ I VPVA+ Sbjct: 188 LSLERLDTLLAQPAQRIGLSATVRPPEAVARFLGGAGETLVVNPAATRPLQLTITVPVAD 247 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 M D+ GSIWP+IE GILDEVLRHR+T+VFTNSRGLAEKLTARLNE Sbjct: 248 MTDIQQRPDAQAAQDGTLAAGSIWPHIEAGILDEVLRHRATLVFTNSRGLAEKLTARLNE 307 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 YA +L P+ A + S +G T R Q D IARSHHGSVSKEQR E ALK+G Sbjct: 308 RYARQLGEQPTEPEAAFGYGSFTGGTEKRAQLPDNLIARSHHGSVSKEQRLEIENALKAG 367 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELRCVVATSSLELGIDMG +DLVIQV PLSVAS LQR+GRAGHQVGG KG+F+PRTRR Sbjct: 368 ELRCVVATSSLELGIDMGDIDLVIQVGAPLSVASALQRVGRAGHQVGGTPKGIFWPRTRR 427 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 DL+D+AV VE M AG L+ + PPHNPLDVLAQ TVAAAAM+ LQVD+W++ VRRA P++ Sbjct: 428 DLLDTAVTVEAMLAGELDAIAPPHNPLDVLAQHTVAAAAMETLQVDDWFALVRRADPFRA 487 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 LPR F+A LDMLSGRYP+ +F+ RP+++W+R L+ RPGAQ LAVTSGGTIPDRGM Sbjct: 488 LPRAAFEAVLDMLSGRYPADEFANLRPRIIWDRHNHTLSGRPGAQHLAVTSGGTIPDRGM 547 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 +SV+LPEGEE+ G+RRVGELDEEMVYESRVNDIITLGATSWRIQQIT DQV+V PAPGRS Sbjct: 548 FSVMLPEGEEQTGARRVGELDEEMVYESRVNDIITLGATSWRIQQITHDQVVVVPAPGRS 607 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 ARLPFW GEG GR A LGE IG FL + GA + T+ NIQ LI EQ Sbjct: 608 ARLPFWHGEGVGRSAALGEAIGRFLREVDQGAPLTDTLDEH-----ARHNIQTLIAEQHQ 662 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 ATG++P R L++ERCRDE GDWR+ILHSPYG+RVH PWA+A+A RI + G D +VVAS Sbjct: 663 ATGVLPTDRALLIERCRDETGDWRVILHSPYGQRVHAPWALAVADRIARVMGIDPAVVAS 722 Query: 735 DDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRT 794 DDGIVAR PD+DG++P A +FLF P++L ++V AVG SALFAARFRECAARALL+P R Sbjct: 723 DDGIVARFPDSDGRVPGAELFLFAPDELQRVVNHAVGQSALFAARFRECAARALLLPRRN 782 Query: 795 PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 PG R+PLWQQRLRA QLLE+A+ + DFP+++ET RECLQDVYDLPAL RLM RL GEIQ Sbjct: 783 PGQRSPLWQQRLRAGQLLEVARQFDDFPILIETARECLQDVYDLPALHRLMARLQRGEIQ 842 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 ++DVTT +PSPFA LLFGYVAEFMY SDAP AERRAS+L+LDS+LL+ LLG+VD ELL Sbjct: 843 LADVTTESPSPFAAPLLFGYVAEFMYASDAPQAERRASMLALDSKLLKRLLGEVDMRELL 902 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL 974 D ++ +VE+ELQRL G A E L DLLRE+GP+T +LA R++G + +A L+ L Sbjct: 903 DTTLVARVEQELQRLPAGYHATSIEALSDLLREVGPLTDAELALRYSGDA-PLAEGLQAL 961 Query: 975 LAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRA 1034 +RIF I+ Q+R A +DA+RLRDALG +P++LP L V+ PL DL RY R Sbjct: 962 QLAQRIFSVRIADQQRWALAEDASRLRDALGCHVPDTLPPALLQPVTRPLYDLLHRYART 1021 Query: 1035 HALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL-------QQDIWVSDEVFRRLRLR 1087 HAL TA +LAH F LG+A+V + L +LR+QG V+ ++ WV++ VFRRLRLR Sbjct: 1022 HALFTASELAHHFGLGVAVVADALGELRQQGKVIKGDFTPSDDEEPQWVAENVFRRLRLR 1081 Query: 1088 SLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLA 1147 SLQAAR+AT+PV Y LLLERQGV+ + G + GV+GV+RVIEQLA Sbjct: 1082 SLQAARDATKPVDPAVYVALLLERQGVVSDASAR------QTQGAFSGVNGVVRVIEQLA 1135 Query: 1148 GVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAE 1207 G+ LPA+LWE+ ILP RVRDY MLDELL++G V+W GQ+ G +GLV+LHL EYAAE Sbjct: 1136 GIALPAALWETHILPVRVRDYQPAMLDELLSSGEVVWHGQRAPGAAEGLVSLHLSEYAAE 1195 Query: 1208 SFTPAEADQA-NRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALV 1266 + PA+ + + LQ I+ +L DG WF +Q+ R+ +S D + + +A+W L Sbjct: 1196 TLPPADEGKTIALTPLQHQILTLLQDGSGWFVRQLIPRLAQ---DSPDPALIYQAMWDLA 1252 Query: 1267 WQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSP-RVSYNTPNLAGRW 1325 W+G +T+D W+ LR++T ++ R R R RRG YA P S ++AGRW Sbjct: 1253 WRGYLTTDTWSALRSVTGHVNSPRPRPARPSRHRRGHAGYAAPASRIASGPGLTSMAGRW 1312 Query: 1326 SLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMR 1385 SLL + DTER LAL ENMLDR+ ++SR A IAE +PGGFP++Q + R +EDSGR++R Sbjct: 1313 SLLARSAIADTERALALTENMLDRFAVVSRGAAIAEQVPGGFPALQPVLRGLEDSGRVLR 1372 Query: 1386 GRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPAT 1445 GRFV G+G AQFA+ IDRLR LA+ Q +PVAL+ DPAN +G LPWP A Sbjct: 1373 GRFVAGMGAAQFADHTVIDRLRQLASH--QRLTGSPVALAVLDPANPFGVQLPWPLSLAG 1430 Query: 1446 LVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE-VFHALTTALRREPRLRF 1504 PTRR GALVV+ G++LLYL QGGK+++ + L AL AL+RE L F Sbjct: 1431 NRPTRRHGALVVIGHGRVLLYLPQGGKELMTFASAATLDEQHAAVLALGAALKREKHLSF 1490 Query: 1505 TLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 TL V+D P Q+P+ L+EAGFS P+G W Sbjct: 1491 TLERVDDQPAGQSPLLAALKEAGFSRVPRGYSW 1523 >UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Corynebacterineae RepID=D0L8P3_GORB4 Length = 1544 Score = 1544 bits (3997), Expect = 0.0, Method: Composition-based stats. Identities = 747/1558 (47%), Positives = 963/1558 (61%), Gaps = 67/1558 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ TR WF AF PT Q W+ A E+ LVIAPTGSGKTL+AFL+ALDRL Sbjct: 11 FTAPTRRWFTGAFTAPTPAQVGAWNSIADGENTLVIAPTGSGKTLSAFLWALDRLAATP- 69 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +R+LYISP+KAL DV+RNL+ PL GI + GE E N+ VG+R+GD Sbjct: 70 ------DRAAGTRVLYISPLKALAVDVERNLRAPLTGITRAAQELGEPEPNITVGLRSGD 123 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T A R L + PPDILITTPESLYLMLTS RETLR V+ VI+DEVHAVAG+KRG HLA Sbjct: 124 TAAAARRLLAKAPPDILITTPESLYLMLTSSVRETLRTVDAVIVDEVHAVAGTKRGTHLA 183 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL T AQRIGLSATVR VA FL G RP VV PPA + +R+ VPV + Sbjct: 184 LSLERLDDLLETPAQRIGLSATVRPPEVVADFLAGSRPCRVVRPPAAKTFDLRVDVPVPD 243 Query: 255 MDDVSSVASGTGED---SHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 M ++ A T +D + + GS+WP++E I+D + +R+TIVF NSR LAE+LTAR Sbjct: 244 MANIPPPAEDTADDLDDAFSPTAGSLWPHVEASIVDAIEANRATIVFANSRRLAERLTAR 303 Query: 312 LNELYAARLQRSPSIAVDA--AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 LNE+YA R A + S + +AR+HHGSVSKEQRA E Sbjct: 304 LNEIYAQRSGVPVQAAANPGVPGGAPAHIMASGAAGGAPTTLARAHHGSVSKEQRAEIED 363 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 LKSG LRCVVATSSLELGIDMGAVDLVIQV P SVASGLQRIGRAGHQVG +S+G+ + Sbjct: 364 DLKSGRLRCVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGEISQGVLY 423 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 P+ R DLV V VE M AG +E L P NPLDVLAQ T+AAAAMD L VD+W+ +RRA Sbjct: 424 PKHRTDLVHCTVAVERMRAGAIEELRIPKNPLDVLAQHTIAAAAMDDLDVDQWFDVIRRA 483 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 AP+++L R V+ +TLD++SGR+PS +F+ RP++ W+R+ L R GAQ LAVTSGGTI Sbjct: 484 APYRELAREVYVSTLDLISGRFPSDEFAELRPRVTWDRDANTLVGRRGAQRLAVTSGGTI 543 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PDRG++ V + S RVGELDEEMVYESRV D+ LGATSWRI+ IT D+V+VTP Sbjct: 544 PDRGLFGVFM----VGEKSARVGELDEEMVYESRVGDVFALGATSWRIEDITHDRVLVTP 599 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLI 669 A G+ RLPFW G+ GRPAELG IG F +AD E N+ LI Sbjct: 600 AFGQPGRLPFWVGDAVGRPAELGAAIGKFTGAIADPQELDRQATELGLTEYARDNLAALI 659 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 EQR ATG +P R LV+ER RDE+GDWR+ILHSPYG RVH PWA AI+ R+ G Sbjct: 660 AEQREATGHLPTDRTLVIERFRDELGDWRVILHSPYGLRVHAPWASAISARLQETLGLAG 719 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 + ASDDGI+ R+PDT+ + P AA+F+ +P+ + Q+V +A+ S++FA+RFRECAARALL Sbjct: 720 ATTASDDGIIVRLPDTEDEPPGAAVFVIDPDDIEQMVTDALAESSMFASRFRECAARALL 779 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 +P R PG R PLWQQR R++QLL +A +PDFP++LE +RECLQDVYDLPAL L+RR++ Sbjct: 780 LPRRDPGRRAPLWQQRQRSAQLLSVASQFPDFPIVLEAVRECLQDVYDLPALTDLLRRIS 839 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD 909 +++ + T PSPFA SLLFGYV FMY DAPLAERRA+ LSLD+ LL LLG+VD Sbjct: 840 TRRVRLVETETPEPSPFAASLLFGYVGAFMYSDDAPLAERRAAALSLDTSLLAQLLGRVD 899 Query: 910 PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVAS 969 ELLDP VI V LQRL P R+A+ E + DLLR LGP+T E++A R+ G ++ A+ Sbjct: 900 LRELLDPGVIAAVIARLQRLDPSRQARDAEDIVDLLRWLGPLTTEEVAARYQG--DDAAA 957 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFL 1029 L +L I G+ A ++D ARLRDALGV P +P Y V P+ DL Sbjct: 958 VLADLHRAGPIISVTHQGRPLWAAVEDTARLRDALGVPAPLGVPAAYTDPVPDPVTDLVH 1017 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-----------QDIWVSD 1078 RY R H T + A + +A+V + L +L Q V+ W Sbjct: 1018 RYARTHGPFTLTEAAESLGMAVAVVRDTLVRLAAQRKVVEGDFLPAAADDAHPTTQWCHA 1077 Query: 1079 EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDG 1138 +V ++R SL A+R PV A T R L V PA GVDG Sbjct: 1078 DVLGQIRRGSLAASRADVAPVDAATLGRFLGGWHHVTPA-------------ERLSGVDG 1124 Query: 1139 VMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVA 1198 V V++QLAG LPAS WES ILPARV DYS MLDELL++G V+WSG ++G DG +A Sbjct: 1125 VATVLDQLAGYPLPASAWESLILPARVADYSPAMLDELLSSGEVVWSGHGRIGGADGQIA 1184 Query: 1199 LHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGES----VD 1254 H + + P D+ + +A+ A++AVL GGA Q++ + + + Sbjct: 1185 FHPADLLPVTLEPP--DEIDLTAIHAALLAVLTPGGALRFAQLTDAASETLSAAGAAVPS 1242 Query: 1255 LSALQEALWALVWQGVITSDIWAPLRALTRSSSNA--RTSTRRSHRARRGRPVYAQPVSP 1312 + ++ ALW LVW G + +D +A +RAL R + R + R A RGR + Sbjct: 1243 TADIESALWDLVWAGQVANDSFAAVRALLRPDRRSVGRGAGSRPTPAHRGRARAPRIRPQ 1302 Query: 1313 RV-----------SYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAE 1361 R+ ++P GRW LL + L+ T AL E +L RYG+++R +V E Sbjct: 1303 RLSTRFLSEHATGRPSSPTTTGRWFLLARDDLDPTAATQALCEQLLVRYGVVTRGSVATE 1362 Query: 1362 NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP 1421 +PGGF + EDSG + RG +V+GLGGAQFA T+D LR A A Sbjct: 1363 GVPGGFARVYKALSVFEDSGVVRRGYYVDGLGGAQFARPTTVDELRRHAVDADSAAPA-- 1420 Query: 1422 VALSANDPANVWGNLLPWP---AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 V L+A DPAN +G +L WP A + P R+AGALVV+ G+ +L++ +GGK +L + Sbjct: 1421 VVLAATDPANPYGAVLDWPETSAEDSGHRPGRKAGALVVLLAGEPVLFVERGGKTVLTFS 1480 Query: 1479 EKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 + L AL A+R R T+ +V+ PV + M +L +AGF+++P+G+ Sbjct: 1481 SDADRL-RTAAGALADAVRAGRLSRLTIDQVDSRPVLGSEMAPVLVDAGFATTPRGVR 1537 >UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinomycetales RepID=A0JSK2_ARTS2 Length = 1694 Score = 1527 bits (3954), Expect = 0.0, Method: Composition-based stats. Identities = 747/1674 (44%), Positives = 983/1674 (58%), Gaps = 161/1674 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL--- 69 D FS ATR+WFL AF PT Q W+ + HALV+APTGSGKTLAAFL+ALDRL Sbjct: 31 DRFSQATREWFLGAFSAPTPAQNGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLQSS 90 Query: 70 ----------FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 + + ++ +R+LYISP+KALG DV+RNL+ PL GI +R Sbjct: 91 APAEPEALPGLDPAAKGRKPKTPKRKTRVLYISPLKALGVDVERNLRAPLIGITQTAKRL 150 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIID 179 G + VG+R+GDT +R L +PPDILITTPESL+LMLTS+ARETL V+T+I+D Sbjct: 151 GLPAPLITVGVRSGDTTTADRRALLSHPPDILITTPESLFLMLTSKARETLSEVDTIIVD 210 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 EVHAVAG+KRGAHLA+SLERLDALL AQRIGLSATV VA FL G PV +V PP Sbjct: 211 EVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPRELVAQFLAGSAPVEIVAPP 270 Query: 240 AMRHPQIRIVVPVANMDDVSSVAS--GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 + ++ + + VPV +M D+ A +G S + SIWP++E I+D V+ ++STIV Sbjct: 271 SKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIVDLVMANQSTIV 330 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF------------------------ 333 F NSR LAE+LTARLNE+YA R + S +D + Sbjct: 331 FANSRRLAERLTARLNEIYAERQLMAASGGLDGSGAGAPDFEPAGAPAGGASAAVPTSTA 390 Query: 334 -ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG 392 + A + +D +AR+HHGSVSK+QRA+ E LKSG LRCVVATSSLELGIDMG Sbjct: 391 TPAHMMAQAGSTVGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVATSSLELGIDMG 450 Query: 393 AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE 452 AVDLV+QV +P SVASGLQR+GRAGHQVG VS+G+ FP+ R DLV + + VE M AG++E Sbjct: 451 AVDLVVQVESPPSVASGLQRVGRAGHQVGEVSQGVLFPKHRADLVHTTITVERMLAGKIE 510 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 L P NPLD+LAQQTVAA A+ ++ V+EW+S VRR+AP+ LPR F+ATLD+L+GRYP Sbjct: 511 RLYVPANPLDILAQQTVAATALGSIDVEEWFSTVRRSAPFASLPRSAFEATLDLLAGRYP 570 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE-------- 564 S +F+ RP+++W+R G + RPGAQ LAVTSGGTIPDRG++ V + E Sbjct: 571 SDEFAELRPRIIWDRNAGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIGTETEGTGSSGS 630 Query: 565 -----------------KAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 G RRVGELDEEMVYESRV D+ LGATSW+I+ IT D+V+V Sbjct: 631 PGSASGDGRAASPAAAAAKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVLV 690 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIANI 665 +PA G+ +LPFW+G GRP +LG +G F+ L+ D ++ N+ Sbjct: 691 SPAFGQPGKLPFWKGASLGRPVDLGRALGAFVRELSASDVGPAMERCKASGLDDFAANNL 750 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 + EQ+ AT +VP LV+ER DE+GDWR++LHSP+G VH PWA+A+ R+H + Sbjct: 751 IQYLAEQKLATEVVPSDTTLVVERFHDELGDWRVVLHSPFGMPVHAPWALAVGQRLHQRY 810 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G D S +A+DDGIV R+P + + P A +FLF+PE+L QIV VG SALFA+RFRECAA Sbjct: 811 GMDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASRFRECAA 870 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RALL+P +TPG R PLWQQR R++QLL++A+ YP FP++LET+RECLQDVYDLPAL+ + Sbjct: 871 RALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPALKDIA 930 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 + E++I TT PSPFA SLLFGYVA+F+Y+ D+PLAERRA+ L+LDS LL LL Sbjct: 931 ASIERRELRILQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTLLNELL 990 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE 965 G+V+ ELLD +VI E ELQRLAP RR +G EG+ DLLR LGP+T ++A R + Sbjct: 991 GRVELRELLDAKVIDATERELQRLAPDRRVRGMEGVADLLRLLGPLTPAEVAARLEPAGP 1050 Query: 966 EVASYLENLLAV-----------------------KRIFPAMISGQERLACMDDAARLRD 1002 VA + R I G ER A ++DAARLRD Sbjct: 1051 PVAEPAPGVEPAPVVEPVGTLVADAAAHLAALQRANRALRVNIGGVERFAAVEDAARLRD 1110 Query: 1003 ALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLR 1062 A+GV LP +P ++ V+ PL DL RY R H TA + A LG+A+V L++L Sbjct: 1111 AIGVPLPMGVPLAFIEPVADPLGDLVSRYARTHGPFTAAEAAARLGLGVAVVGTALKRLA 1170 Query: 1063 EQGLVMNLQ-----------------------------------QDIWVSDEVFRRLRLR 1087 G V+ + W EV R+LR R Sbjct: 1171 ADGRVVEGEFRPHATPPRQVPETPEPGEEDAPALPSASTITLAGTSEWCDAEVLRKLRRR 1230 Query: 1088 SLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLA 1147 SL A R PV A+ Y R L Q V G+DG++ ++QL+ Sbjct: 1231 SLAALRAEVEPVDASAYGRFLPAWQNVRTPGRRG--------QSALRGLDGIITAVDQLS 1282 Query: 1148 GVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAE 1207 GV +PAS WE +L +RV DY MLDEL+A G V+WSG L +DG V+LHL + A Sbjct: 1283 GVPVPASAWEPLVLASRVSDYQPAMLDELMAAGEVLWSGAGALPGNDGWVSLHLADSAEL 1342 Query: 1208 SFTPAEADQANRSALQQAIVAVLA-DGGAWFAQQISQRIRDKIGESVDLSALQEALWALV 1266 + PA Q + QQ ++ L +GG +F +Q++ I + + + ALW L Sbjct: 1343 TLNPAPDYQPGDA--QQRLLEHLQNNGGGYFFRQLTD-IAGGMDSVLSDQDVVSALWDLA 1399 Query: 1267 WQGVITSDIWAPLRALTRSSSNARTS------------TRRSHRARRGRPVYAQPVSPR- 1313 W G IT D +AP+RA+ A +R G A R Sbjct: 1400 WAGRITGDTFAPVRAMIAGGHTAHRQVARAPRARAPRMSRLGRAHGTGLMGSAGLTGGRY 1459 Query: 1314 -----VSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFP 1368 + P AGRWS L + L+ T A AE +LDRYG+++R +V+AENI GGF Sbjct: 1460 GSVTGAAPTPPLAAGRWSALPLPELDPTIHARATAELLLDRYGVVTRGSVMAENILGGFG 1519 Query: 1369 SMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQA-TQTRHYTPVALSAN 1427 M + +E++GR RG F+E LG AQFA T+DRLR + + +AL+A Sbjct: 1520 LMYKVLARLEEAGRCRRGYFIEHLGAAQFAVPATVDRLRSYSEDSQLAKPEPVALALAAT 1579 Query: 1428 DPANVWGNLLPWPA----HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEEL 1483 DPAN +G LPWPA + P R+AGALVV+ G L LY+ +GGK +L + E E+ Sbjct: 1580 DPANPYGAALPWPALSVEAGSGHRPGRKAGALVVMVDGALALYVERGGKTLLAFDEDPEV 1639 Query: 1484 LAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 LA + +R + + +VN + TP L AG S+P+GL Sbjct: 1640 LAAAAAALVGVV-KRGAVDKLIMEKVNGHGILDTPAAAALTHAGAYSTPKGLRI 1692 >UniRef50_C8NN73 ATP-dependent helicase n=12 Tax=Corynebacterium RepID=C8NN73_COREF Length = 1602 Score = 1521 bits (3937), Expect = 0.0, Method: Composition-based stats. Identities = 709/1557 (45%), Positives = 964/1557 (61%), Gaps = 84/1557 (5%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P +WF F+ PT VQ TW A E+ALV+APTGSGKTLAAFL+AL+ L + G Sbjct: 21 FRPQVSEWFRDVFEAPTPVQEGTWRAVADGENALVVAPTGSGKTLAAFLWALNSLVEQTG 80 Query: 75 E-----DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + + + + R+LYISP+KALG D++ NL+ PL GIA R G N+ VG Sbjct: 81 QTVLDTGSPTPVEGRRVRVLYISPLKALGVDIENNLRAPLTGIARTASRMGLDVPNITVG 140 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +R+GDTPA ER++ R PPDILITTPES YLMLTS+A L+ V+ VIIDE+HA+AG+KR Sbjct: 141 VRSGDTPAAERARQVRKPPDILITTPESAYLMLTSKAGAILKDVDVVIIDEIHAMAGTKR 200 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G HLAL+LERL+ L+ QR+GLSATVR VA FLGGDRPVT+V PPA + + + Sbjct: 201 GVHLALTLERLEKLVARPIQRVGLSATVRPLERVAQFLGGDRPVTIVAPPAEKKWDLTVT 260 Query: 250 VPVANMDDVSSVASGTG-----------------EDSHAGREGSIWPYIETGILDEVLRH 292 VPV +M D+ G+ +S +GSIWP+IE + +V+ Sbjct: 261 VPVEDMSDLPVQEPGSTIGDYVIDDPLGLAGPGEAESALPTQGSIWPFIEHQVYQQVMSA 320 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 RST+VF NSR AE+LT+RLNE++A S++ + + ++ V + IA Sbjct: 321 RSTLVFVNSRRTAERLTSRLNEIWALE-HDPESLSAERRRPPAQVMVAADEVGQAPAVIA 379 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 R+HHGSVSK++RA+TE LK G L+ VV+TSSLELGIDMGAVDLV+QV +P SVA GLQR Sbjct: 380 RAHHGSVSKDERAMTETMLKEGTLKAVVSTSSLELGIDMGAVDLVVQVESPPSVAGGLQR 439 Query: 413 IGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 +GRAGH VG S G F+P+ R DLV +A+ VE M G +E L P N LDVLAQQTVAA Sbjct: 440 VGRAGHSVGATSTGSFYPKHRSDLVQTAITVERMTQGLIEELKVPMNALDVLAQQTVAAT 499 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL 532 A+ + VD+W+ VRRA P+++L R VFD+ +D++SG YPS DF+ RP++V++R +G+L Sbjct: 500 AITDVHVDDWFDTVRRAYPYRELDREVFDSVIDLVSGVYPSTDFAELRPRVVYDRVSGML 559 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 RPGAQ +AVTSGGTIPDRGM+ V L GE RRVGELDEEMVYESRV D+ TLGA Sbjct: 560 EGRPGAQRVAVTSGGTIPDRGMFGVFLMGGE--GTPRRVGELDEEMVYESRVGDVFTLGA 617 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 +SWRI++ITRDQV+VTPAPG + RLPFW G+ GRPAELG +G + + SG Sbjct: 618 SSWRIEEITRDQVLVTPAPGHTGRLPFWTGDQAGRPAELGRALGAYRRRVLADPTTSGL- 676 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 E N+ + EQ ATGI+P + LVLER RDE+GDWRI+LH+PYGR V+ Sbjct: 677 -----EGWAHDNLVTYLREQEEATGILPDEKTLVLERFRDELGDWRIVLHTPYGRGVNAA 731 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 WA+AI RI L G DA VA DDGIV R+P+ D + P A++F+F+ +++ + V E VG+ Sbjct: 732 WALAIGARIAELTGMDAQAVAGDDGIVLRLPEGDEE-PGASLFMFDADEVEKTVTEQVGN 790 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 SALFA+RFRECAARALL+P R PG R PLWQQR RA+QLL++A+ YP FP+ILET+RECL Sbjct: 791 SALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECL 850 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 QDVYDLPAL+ L+ L +++I++VTT PSPF++SLLF Y FMY+ D+PLAE+RA+ Sbjct: 851 QDVYDLPALKELVGDLQLRKVRIAEVTTQQPSPFSSSLLFNYTGAFMYEGDSPLAEKRAA 910 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 L+LD LL LLG+V+ +LLDP VI +V +LQR RRA+ E L D LR LGP+ Sbjct: 911 ALALDPSLLAKLLGEVELRQLLDPDVIEEVHTQLQRKGE-RRARNNEELADSLRILGPIP 969 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 +++L + + ++ R I+G+ LA + DA LRDALGV +P + Sbjct: 970 LDELGEHISFDDPDLGD---------RAMTVRINGRPHLAQVLDAPLLRDALGVPVPPGV 1020 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQ--QLREQGLVMNL 1070 P + ++ L L R++R A+ LA F LGIA L+ + + + Sbjct: 1021 P-AQVETITDALEQLVNRWVRTRGPFVAQDLAEAFGLGIATAHTALRNADVVQGRYRQGV 1079 Query: 1071 QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSP 1130 Q+ + + EV RR+R RSL AR+ T+PV+ + +AR LL+ Q V Sbjct: 1080 QEQEYCATEVLRRIRSRSLAIARQQTKPVSQSAFARFLLDWQQVA----------GVDKH 1129 Query: 1131 GVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL 1190 GVDG VIEQLAGV LPAS WE +LP RV DY+ LDEL A+G V+ G + Sbjct: 1130 PTLRGVDGTFAVIEQLAGVRLPASAWEDLVLPRRVGDYTPLHLDELTASGEVLVVGAGQA 1189 Query: 1191 GEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDK-- 1248 G D + L +YAA+ E +ALQ++++ VLA GG + I + + Sbjct: 1190 GSQDPWIMLLPADYAAQLMP--EPVTTGLTALQESVLEVLAPGGGFRFADILADVTGEDL 1247 Query: 1249 --IGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVY 1306 I + L+EALW LV G+++ D +AP+RA S + A + RR +R+ R Sbjct: 1248 GLITGHISPEQLREALWGLVEAGLVSPDSFAPVRARLASGTTAHRAKRRPNRS---RLRM 1304 Query: 1307 AQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGG 1366 + ++ + P++ GRWSL L+ T R LA E LDRYG+++R +V+AE++ GG Sbjct: 1305 GRTSFAQMESSPPDMRGRWSLSVRPALDATTRSLAHGEAWLDRYGVVTRGSVVAEDVIGG 1364 Query: 1367 FPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYT 1420 F + E+SG+ MRG +EGLG AQF+ IDRLR D+ + T Sbjct: 1365 FALAYKVLSGFEESGKAMRGYLIEGLGAAQFSTPAIIDRLRGMDDSPDVEGWPSGTTDPE 1424 Query: 1421 PVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 ++A DPAN +G LPWP P+R AGA V+++ G LL +L +GG+ + ++ E+ Sbjct: 1425 VYLIAAADPANPYGAALPWPEQG----PSRAAGATVIIADGLLLAHLTRGGRTLTLFTEE 1480 Query: 1481 EELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 +A + + + ++N V +P R AG S +P+G+ + Sbjct: 1481 ITHVARALAIQ----------EKLVVEKINGESVFDSPHLPAFRAAGASITPRGMRF 1527 >UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomycetales RepID=Q2J762_FRASC Length = 1567 Score = 1519 bits (3934), Expect = 0.0, Method: Composition-based stats. Identities = 747/1580 (47%), Positives = 952/1580 (60%), Gaps = 91/1580 (5%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 D PDP + FS TR WF AF T Q W +ALV+APTGSGKTLAA Sbjct: 24 PDPPDPLTA----FSAPTRSWFGAAFTAATPAQRGAWEAIRTGGNALVVAPTGSGKTLAA 79 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL++LD L R A + R+LY+SP+KAL DV+RNL+ PL GI +R G Sbjct: 80 FLWSLDTLARSAPP----AEPTRRCRVLYVSPLKALAVDVERNLRAPLAGIRSAAQRLGL 135 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEV 181 + ++ VG+R+GDTPA ER PPD+LITTPESL+L+LTS ARE+LRGV TVI+DEV Sbjct: 136 PQPDVTVGLRSGDTPAAERRGFGTRPPDVLITTPESLFLILTSAARESLRGVRTVIVDEV 195 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 HAVAG+KRGAHLALSLERLDALL T AQRIGLSATVR + A FLGG PV VV PPA Sbjct: 196 HAVAGTKRGAHLALSLERLDALLDTPAQRIGLSATVRPVEEAARFLGGTAPVAVVRPPAA 255 Query: 242 RHPQIRIVVPVANMDDVSSV---ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + QI +VVPV +M + S G + A SIWP +E +LD VL H ++IVF Sbjct: 256 KTLQIDVVVPVEDMTQLGGQLLDGSPDGSAASAPHRASIWPAVEQRVLDLVLAHSASIVF 315 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ-----------SS 347 NSR LAE+L ARLNELYA RL + + A ++ + Sbjct: 316 ANSRRLAERLCARLNELYAERLAAATAADESVAGDGPGEAGRTSPAALMGASGQGGGTAG 375 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVA 407 IAR+HHGSVS+EQRA E+ LK+G L VVATSSLELGIDMGAVDLV+Q+ +P SVA Sbjct: 376 WPEIARAHHGSVSREQRAGIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQIGSPPSVA 435 Query: 408 SGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQ 467 +G+QR GRAGHQVG S+G+ P+ R DL++ AV+ E M +G +E L P NPLDVLAQQ Sbjct: 436 AGMQRTGRAGHQVGAASRGVIIPKHRSDLLECAVVAERMRSGAIERLRYPRNPLDVLAQQ 495 Query: 468 TVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR 527 VA AM+ VDE + VRR A + LP F+A LDML+GRYPS F+ RP++ W+R Sbjct: 496 IVAMTAMEDWHVDELGALVRRTATFATLPTSAFEAVLDMLAGRYPSDTFAELRPRITWDR 555 Query: 528 ETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 TGILTARPGAQ LAVTSGGTIPDRGM+ V L S RVGELDEEMVYESRV D+ Sbjct: 556 VTGILTARPGAQRLAVTSGGTIPDRGMFGVFL----VGERSSRVGELDEEMVYESRVGDV 611 Query: 588 ITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--G 645 + LG++SWRI++IT D+V+VTPAPGR RLPFW G+ GRPAELG +G FL + Sbjct: 612 VLLGSSSWRIEEITADRVLVTPAPGRPGRLPFWHGDAPGRPAELGRALGAFLREITRLPA 671 Query: 646 AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY 705 + + ++ AN+ ++EQ+ A G + R +V+ER RDEIGDWR+ +HSP+ Sbjct: 672 QAAADRVRAAGLDDRATANLLRYLDEQKAAVGRLHDDRTIVVERFRDEIGDWRLAVHSPF 731 Query: 706 GRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQI 765 G V+ PWA+A+ R+ +G D ++ +DDGIVARIPD + P A + LFEP+++ I Sbjct: 732 GAPVNAPWALALGARLRERYGVDVQIMHTDDGIVARIPDA-AEPPGADLALFEPDEIDAI 790 Query: 766 VREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVIL 825 VR +GSSALFA+RFRECA RALL+P RTPG RTPLWQQR R++ LL +A + FPV+L Sbjct: 791 VRAEIGSSALFASRFRECAGRALLLPRRTPGRRTPLWQQRQRSAALLSVAATFASFPVVL 850 Query: 826 ETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 ET+RECLQDV+D+PAL LMR ++ +++ +V T +PSPFA++LLFGYVA FMY D P Sbjct: 851 ETMRECLQDVFDVPALAELMREVSARTLRVVEVETPSPSPFASALLFGYVAAFMYDGDVP 910 Query: 886 LAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLL 945 LAERRA VLSLDS LL LLG+ D EL+DP + QV +L RLAP R A+ EG+ DLL Sbjct: 911 LAERRAQVLSLDSSLLAELLGEADLRELIDPAALAQVAAQLTRLAPDRHARDVEGVADLL 970 Query: 946 RELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALG 1005 R LG +T E+ R +L L +R I+G+ER ++DA RLRDALG Sbjct: 971 RMLGDLTTEEAVARGAT-----PGWLAELEQTRRALRVRIAGEERWVAIEDAGRLRDALG 1025 Query: 1006 VRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQG 1065 V LP +P+ + V PL DL RY R H E+ A LG A+V L L G Sbjct: 1026 VPLPVGVPDAFTEPVRDPLGDLISRYARTHGPFDTEEPAARLGLGTAVVAGVLDGLVRSG 1085 Query: 1066 LVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATD 1119 ++ + + W V R LR RSL A R+ V T L Q V Sbjct: 1086 RLVRGELHPDRGGEQWCDAGVLRALRRRSLAALRKEVEAVPPRTLGAFLPAWQSVT---- 1141 Query: 1120 GSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLAT 1179 G GVDGV+R +EQL G +PAS WE +LPARV DYS MLDEL + Sbjct: 1142 ----------SGRGRGVDGVLRAVEQLQGALIPASAWEQLVLPARVADYSPTMLDELCSA 1191 Query: 1180 GAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQ 1239 G V W+G L DDG + L L + A P + + A+ L AI+ L G A F + Sbjct: 1192 GEVHWAGAGGLPGDDGWLTLVLADTAPLLLPPPDPEIAS-GPLHTAILDALTGGAALFFR 1250 Query: 1240 QISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA 1299 +S R+ S+D +AL ALW LVW G +T+D APLRAL S+ + R A Sbjct: 1251 ALSDRMG-----SLDDTALATALWDLVWAGRVTNDTLAPLRALLGSAGRPYRAPR-PRAA 1304 Query: 1300 RRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVI 1359 R GRP + P AGRWSLL + T R ALAE +L+R+GI++R AV Sbjct: 1305 RYGRPAMPR------RAGPPTAAGRWSLLPERDTDPTRRAHALAEALLERHGIVTRGAVT 1358 Query: 1360 AENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL---------- 1409 E PGGF + + + ED+GR RG FVE LG AQFA +DRLR + Sbjct: 1359 GERHPGGFAGVYRVLSAFEDAGRARRGYFVESLGAAQFAVPGAVDRLRSIAAAQRDAEAA 1418 Query: 1410 ------ATQATQTRHYTPVALSANDPANVWGNLLPWPAHP-------ATLVPTRRAGALV 1456 A + V L+A DPAN +G LPWP P A P R+AGA+V Sbjct: 1419 PAWAQPAAGPPSSSSAQAVVLAAADPANPFGAALPWPTRPGDDADGAAGHRPGRKAGAMV 1478 Query: 1457 VVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQ 1516 V+ G+L+LY+ +GG+ +L W E + +AP AL A+R R T+ + + + Sbjct: 1479 VIIDGELILYVERGGRSLLSWTEDDHRVAP-AVEALARAVRDGLLGRLTVEKADGQTIVG 1537 Query: 1517 TPMFTLLREAGFSSSPQGLD 1536 + + L AGF +P+GL Sbjct: 1538 STLGAALERAGFHPTPRGLR 1557 >UniRef50_Q5Z170 Putative ATP-dependent DNA helicase n=3 Tax=Corynebacterineae RepID=Q5Z170_NOCFA Length = 1584 Score = 1517 bits (3928), Expect = 0.0, Method: Composition-based stats. Identities = 749/1616 (46%), Positives = 973/1616 (60%), Gaps = 130/1616 (8%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 S VFS AT++WF AF PT+ Q W A EH LV+APTGSGKTL+AFL+A+D Sbjct: 3 SFSTAVFSRATQEWFDGAFPAPTSAQLGAWQAIAAGEHTLVVAPTGSGKTLSAFLWAIDE 62 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L + + + +LYISP+KAL DV+RNL+ PL GI +R G + V Sbjct: 63 LAATAP----DPDAPRGTTVLYISPLKALAVDVERNLRAPLVGITQTAKRLGLDPPEITV 118 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK 188 G+R+GDTPA R + R PPDILITTPESL+LMLTS ARETLR V TVI+DEVHA+AGSK Sbjct: 119 GVRSGDTPAAARRSMQRTPPDILITTPESLFLMLTSAARETLRTVRTVIVDEVHAIAGSK 178 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RGAHLALSL RLD L QRIGLSATVR A +V FL G P+T+V+PPA + + + Sbjct: 179 RGAHLALSLARLDMLTERPVQRIGLSATVRPAEEVGRFLVGAAPITIVSPPAPKTFDLTV 238 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 VPV +M E + + GSIWP+++ I+D VL HRS+IVF NSR LAE+L Sbjct: 239 RVPVPDM----------TEPGESDQPGSIWPHVDEAIVDLVLAHRSSIVFANSRRLAERL 288 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 TARLNE YAAR+ S + + G ++ + ++ +AR+HHGSVSKEQRA+ E Sbjct: 289 TARLNEAYAARVGDPVSTSHAPP---AQLGPSTEVIHGAEQLLARAHHGSVSKEQRALIE 345 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 LKSG LRCVVATSSLELGIDMGAVDLV+QV P SVASGLQRIGRAGHQVG +S+G+ Sbjct: 346 DDLKSGRLRCVVATSSLELGIDMGAVDLVVQVEAPPSVASGLQRIGRAGHQVGEISRGVL 405 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP+ R D++ AV E M GR+E L P +PLD+LAQQTVA A++ + VD W+ VR Sbjct: 406 FPKHRTDVIHCAVAAERMVTGRIEALRIPAHPLDILAQQTVAVCALEPIDVDAWFDAVRA 465 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + LPR +++ LD+LSGRYPS +F+ RP+LVW+R+ G LT RPGAQ LAVTSGG Sbjct: 466 TGSFATLPRSAYESVLDLLSGRYPSDEFAELRPRLVWDRDAGTLTGRPGAQRLAVTSGGA 525 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPDRGM++V + + RVGELDEEMVYESRV D+ LGATSWRI++IT D+V+VT Sbjct: 526 IPDRGMFAVYM----VGEKNTRVGELDEEMVYESRVGDVFALGATSWRIEEITFDRVLVT 581 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP----------WLAE 658 PA G+ RLPFW G+G GRPAELG +G+F+ A + Sbjct: 582 PAFGQPGRLPFWHGDGLGRPAELGAALGEFVRKAAKQTANRADAAADTDLGGLLAGAGLD 641 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 N N+ L+++QR ATG +P + LV+ER RDE+GDWR++LHSP+G VH PWA+A+ Sbjct: 642 ANAATNLVALLDDQRAATGQLPTDKTLVVERFRDELGDWRLVLHSPFGLPVHAPWALAVG 701 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 R+ +G DA+ ASDDGIV R+PDT P A +F+FEP+++ +V E VG SALFA+ Sbjct: 702 ARLRERFGVDAAPNASDDGIVVRLPDTTDDPPGAELFVFEPDEIDDLVTEQVGGSALFAS 761 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RFRECAARALL+P R PG R PLWQQR R++QLL++A+ +PDFP++LET+RECL+DVYDL Sbjct: 762 RFRECAARALLLPRRDPGKRAPLWQQRQRSAQLLDVARKFPDFPILLETVRECLRDVYDL 821 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 PAL L+ R+ ++++ +V T TPSPFA +LLF Y+ +FMY+ D+PLAERRA+ LSLDS Sbjct: 822 PALRDLLGRVARRQVRLVEVETATPSPFANALLFDYIGQFMYEGDSPLAERRAAALSLDS 881 Query: 899 ELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQ 958 LL LLG+V+ ELLD V+ Q E ELQRL P RRA+ EGL DLLR LGP+T E+ Q Sbjct: 882 GLLAELLGRVELRELLDTAVLEQTERELQRLTPERRARDAEGLADLLRLLGPLTPEEAGQ 941 Query: 959 RH-TGSSEEVAS-----------------------------------------------Y 970 R G ++EVA + Sbjct: 942 RCVRGRADEVADTGLPEADPSVAAAATRSADGAPDGSMAGAEPEPSEFPADDGTGPHHRW 1001 Query: 971 LENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLR 1030 L+A +R +G+ A ++DA+RLRDALGV LP P ++ V+ PL DL R Sbjct: 1002 FAELVAARRALEVSFAGRTWWAAVEDASRLRDALGVPLPIGTPAAFIEPVADPLGDLVGR 1061 Query: 1031 YLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QDIWVSDEVFRRL 1084 Y R HA + +A F +G A+ L +L + V+ + W +V RRL Sbjct: 1062 YARTHAPFGLDAVARRFGIGPAVAATALHRLVTEKRVVEGEFTPGASGREWCDTQVLRRL 1121 Query: 1085 RLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIE 1144 R RSL AAR PVA + R L Q V G GVDGV V+E Sbjct: 1122 RRRSLAAARHEVEPVATAAFGRFLPAWQHVG--------------TGELRGVDGVATVVE 1167 Query: 1145 QLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEY 1204 QLAGV PAS WES ILPARVRDY+ MLDEL ATG VIWSG + DG +ALHL E Sbjct: 1168 QLAGVPAPASAWESLILPARVRDYTPAMLDELTATGEVIWSGHGAITAKDGWIALHLAEQ 1227 Query: 1205 AAESFTPAEADQANRSALQQA------------------IVAVLADGGAWFAQQISQRIR 1246 A + P + + + + L+ + VL GGA+F +Q+S Sbjct: 1228 APFTLPPPDDIELSETHLRLLAALGATPAPRAGADGPVPLPPVLHGGGAYFFRQLSDATG 1287 Query: 1247 DKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVY 1306 +D +A+ ALW LVW G++ D +AP+RAL ++ T+ R RA RGR Sbjct: 1288 -----LLDDTAVAAALWELVWAGLVAGDTFAPVRALLSGTARTTTAHRTPRRAPRGRAYL 1342 Query: 1307 AQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGG 1366 +P P P +AGRWSLL ++T R A A+ +L+RYG+++R +V E +PGG Sbjct: 1343 PRPSLP-TRTGPPAVAGRWSLLPERVTDNTVRAHATADILLERYGVLTRGSVQNEGVPGG 1401 Query: 1367 FPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP----V 1422 F M + ED GR RG FV+ LGGAQF+ +DRLR T + P + Sbjct: 1402 FALMYRVLTEFEDRGRCRRGYFVDSLGGAQFSTTDVVDRLRSHDTDRGRPGDRAPAPSGL 1461 Query: 1423 ALSANDPANVWGNLLPWP--AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 L+A DPAN +G LPWP P R+AGALVV+ GG+L+LYL +GGK +L + Sbjct: 1462 VLAACDPANPYGAALPWPKNEGEGGHRPGRKAGALVVLVGGELVLYLERGGKTLLTFTTD 1521 Query: 1481 EELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 + + ++ V L +AGF+ +P+GL Sbjct: 1522 PTARRAAATAL-AEVVFHGRVDALVIDRIDGETVHGNTFAAFLTDAGFADTPRGLR 1576 >UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium glutamicum RepID=Q8NS36_CORGL Length = 1520 Score = 1502 bits (3888), Expect = 0.0, Method: Composition-based stats. Identities = 706/1549 (45%), Positives = 959/1549 (61%), Gaps = 88/1549 (5%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P +WF F PT VQ TW ++ ++ALV+APTGSGKTLAAFL+ALD L + G Sbjct: 9 FRPQVAEWFRDVFASPTPVQEGTWEAVSKGKNALVVAPTGSGKTLAAFLWALDSLTEQTG 68 Query: 75 E-----DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + T + ++LYISP+KALG DV+ NL+ PL GIA R G N+ V Sbjct: 69 QQVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLTGIARTASRMGLDVPNITVA 128 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +R+GDTP+ ER++ R PPDILITTPES YLMLTS+A TL V+ VIIDE+HA+AG+KR Sbjct: 129 VRSGDTPSAERARQVRKPPDILITTPESAYLMLTSKAGATLSDVDVVIIDEIHAMAGTKR 188 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G HLAL+LERL+ L+ QR+GLSATVR VA FLGG RPV +V PPA + + + Sbjct: 189 GVHLALTLERLEKLVGRPVQRVGLSATVRPLETVAGFLGGGRPVEIVAPPAEKKWDLTVT 248 Query: 250 VPVANMDDVSSVASGTG-------------EDSHAGREGSIWPYIETGILDEVLRHRSTI 296 VPV +M D+ G+ +S +GSIWP+IE + ++V+ +STI Sbjct: 249 VPVEDMSDLPVQEPGSTIGELVMDDPLGITGESALPTQGSIWPHIEQQVYNQVMSAKSTI 308 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 VF NSR AE+LT+RLNE++A S++ + ++++ + IAR+HH Sbjct: 309 VFVNSRRSAERLTSRLNEIWAME-HDPESLSPQLRRDPAQIMSSADVAGKAPQVIARAHH 367 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRA 416 GSVSK++RA TE LK G LR V++TSSLELGIDMGAVDLVIQV +P SVASGLQR+GRA Sbjct: 368 GSVSKDERATTETMLKEGRLRAVISTSSLELGIDMGAVDLVIQVESPPSVASGLQRVGRA 427 Query: 417 GHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA 476 GH VG S G F+P+ R DLV +AV V+ M G +E + P N LDVLAQQTVAA ++ Sbjct: 428 GHTVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEEIHVPKNALDVLAQQTVAAVSIKD 487 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARP 536 +QVDEWY +R+A P++DL R VFD+ +D++SG YPS DF+ +P++V++R +G+L RP Sbjct: 488 VQVDEWYETIRKAYPYRDLAREVFDSVIDLVSGVYPSTDFAELKPRVVYDRVSGVLEGRP 547 Query: 537 GAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWR 596 G+Q +AVTSGGTIPDRGM+ V L G RRVGELDEEMVYESRV D+ TLGA+SWR Sbjct: 548 GSQRVAVTSGGTIPDRGMFGVFLVGD----GPRRVGELDEEMVYESRVGDVFTLGASSWR 603 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWL 656 I++ITRDQV+VTPAPG + RLPFW G+ GRPAELG+ +G F SG Sbjct: 604 IEEITRDQVLVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRSTLTDPSSSGL----- 658 Query: 657 AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVA 716 E N+ ++EQ +TG++P + LVLER +DE+GDWRI+LH+PYGR V+ WA+A Sbjct: 659 -EGWAHDNLIAFLQEQEESTGVLPDEKTLVLERFKDELGDWRIVLHTPYGRGVNAAWALA 717 Query: 717 IAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALF 776 + +I G DA VA DDGIV R+P+ D P AA+F+FE E++ +V E VG+SALF Sbjct: 718 VGAKIAEETGMDAQAVAGDDGIVLRLPEGDED-PSAALFMFEAEEIETLVTEQVGNSALF 776 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVY 836 A+RFRECAARALL+P R PG R PLWQQR RA+QLL++A+ YP FP+ILET+RECLQDVY Sbjct: 777 ASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVRECLQDVY 836 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSL 896 DLPAL+ L+ L +++I++VTT PSPFA++LLF Y FMY+ D+PLAE+RA+ L+L Sbjct: 837 DLPALKNLIEDLQLRKVRIAEVTTQQPSPFASALLFNYTGAFMYEGDSPLAEKRAAALAL 896 Query: 897 DSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDL 956 D LL LLG+V+ +LLDP +I +V ++L+R R A+ E L D LR LGP+ +++L Sbjct: 897 DPALLAKLLGEVELRQLLDPDIIAEVHQQLRRQG-DRAARNNEELADSLRILGPIPLDEL 955 Query: 957 AQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIY 1016 + T + ++ R I+G+E LA + DA LRDALGV +P +P Sbjct: 956 GEHITFENPDLED---------RAMTVRINGREHLAQVLDAPLLRDALGVPVPPGVP-AQ 1005 Query: 1017 LHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQ--LREQGLVMNLQQDI 1074 + ++ L L R++R TA LA F LGIA LQ + E + Sbjct: 1006 VETITDALEQLVNRWVRTRGPFTANDLAEAFGLGIATAITALQSAPVIEGRYRQGVDVQE 1065 Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 + + EV +R RSL AAR+ TRPV+ + +AR LL+ Q + P Sbjct: 1066 YCATEVLSIIRRRSLAAARKQTRPVSQSAFARFLLDWQQIAPVGATP----------ELR 1115 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 GVDG VIEQLAGV LPAS WE +LP RV DYS LDEL + G V+ G + G D Sbjct: 1116 GVDGTYTVIEQLAGVRLPASAWEDLVLPRRVADYSPIHLDELTSNGEVLIVGAGQAGSRD 1175 Query: 1195 GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVD 1254 ++L +YAA+ + S LQ A++ L GGA+ I + Sbjct: 1176 PWISLLPVDYAAQL---VGEASTSMSPLQDAVLDQLRAGGAFLFSDILEENFGYT----- 1227 Query: 1255 LSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRV 1314 + LQEA+W LV G+++ D +AP+RA S + A + RR R+R + + Sbjct: 1228 TAQLQEAMWGLVEAGLVSPDSFAPIRARLASGTTAHRAKRRPARSR------LRTRTSFA 1281 Query: 1315 SYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLC 1374 S P++ GRW+L V+P + T R +A E LDRYG+++R +V+AE+I GGF + Sbjct: 1282 SDVPPDMRGRWTL-SVQPADATSRSVAHGEGWLDRYGVLTRGSVVAEDIVGGFALAYKVL 1340 Query: 1375 RSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYTPVALSAND 1428 E+SG+ MRG F+EGLG AQF+ IDRLR D+ + ++A D Sbjct: 1341 SGFEESGKAMRGYFIEGLGAAQFSTPAIIDRLRGHDDSPDVEGWPSGATDPDVYLIAAAD 1400 Query: 1429 PANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEV 1488 PAN +G LPWP P+R AGA+VV+ G LL +L +GG+ + V+ + P++ Sbjct: 1401 PANPYGAALPWPEQG----PSRAAGAMVVLCDGLLLAHLTRGGRTLTVFSDN----IPKI 1452 Query: 1489 FHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 AL T R T+ ++N V +P+ R+ G + +P+G+ + Sbjct: 1453 ATALIT------YERLTVEKINGDNVFDSPLLEQFRKHGATITPKGMRF 1495 >UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacteria RepID=A6W838_KINRD Length = 1584 Score = 1498 bits (3877), Expect = 0.0, Method: Composition-based stats. Identities = 731/1588 (46%), Positives = 963/1588 (60%), Gaps = 90/1588 (5%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS ATR WF AF PT Q W +R +HALV+APTGSGKTL+AFL+ALD L E Sbjct: 18 FSEATRAWFTGAFAAPTPAQLGAWDAVSRGQHALVVAPTGSGKTLSAFLWALDGLAGEPV 77 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + K R+LY+SP+KAL DV+RNL+ PL GI +R G +RVG+R+GD Sbjct: 78 PE----DKDHRCRVLYVSPLKALAVDVERNLRSPLTGIRQAAQRLGLPVPEVRVGVRSGD 133 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T +ER TR PPD+LITTPESL+L+LTS+ARE LRGV TV++DEVHA+AGSKRGAHLA Sbjct: 134 TSQEERRGFTRTPPDVLITTPESLFLLLTSKAREQLRGVRTVVLDEVHAMAGSKRGAHLA 193 Query: 195 LSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 LSLERLDAL+ QR+GLSATVR VA ++ G RPVT+V PP+ + +R+VV Sbjct: 194 LSLERLDALVQAAGGEPTQRVGLSATVRPVQTVAEWVSGGRPVTIVQPPSTKEFDLRVVV 253 Query: 251 PVANMDDVSSVASG-------TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 PV +M D+ + G TG+ S R SIWP++E I+D V HRST+VF NSR Sbjct: 254 PVEDMSDLDASGRGAEDPDDLTGQASGGARRASIWPHVEERIVDLVAEHRSTLVFANSRR 313 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 L+E+LTARLNE++ RL A G + + +AR+HHGSVSKEQ Sbjct: 314 LSERLTARLNEVWDERLNPEEPDGAAPAPPAQLMGQ-AGTGTGAPAVLARAHHGSVSKEQ 372 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R++ E+ LK+G L VVATSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAGHQVG V Sbjct: 373 RSLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAV 432 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 S+G+ FP+ R DL+ +AV+VE M GR+E L P NPLDVLAQQ VA AMD V + Sbjct: 433 SRGVLFPKFRGDLLQTAVVVERMRDGRIEELHVPANPLDVLAQQIVAMVAMDEWTVPDLL 492 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 + +RAAP+ L R V DA LDMLSGRYPS +F+ RP+LVW+R T LT RPGAQ LAV Sbjct: 493 ALAQRAAPFATLSRAVLDAVLDMLSGRYPSDEFAELRPRLVWDRVTETLTGRPGAQRLAV 552 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 TSGGTIPDRG+++V L GE RRVGELDEEMVYESRV D+ITLG+++WR++ IT D Sbjct: 553 TSGGTIPDRGLFAVFLATGE--GPGRRVGELDEEMVYESRVGDVITLGSSAWRVEDITHD 610 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA------DGAFFSGTIPPWLA 657 +V+VTPAPG+ RLPFW GE GRPAELG +G+F+ L G + Sbjct: 611 RVLVTPAPGQPGRLPFWHGEALGRPAELGRALGEFVRELGGLDGGFAGEPARERVRAAGL 670 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 ++ N+ + EQ+ AT VP + +V+ER RDE+GDWRI +HSP+G +VH PWA+A+ Sbjct: 671 DDWATGNLLAYLTEQQEATRHVPDDQTIVVERFRDELGDWRICIHSPFGGQVHSPWALAL 730 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTD----GKLPDAAIFLFEPEKLLQIVREAVGSS 773 R+ +G D + +DDGIV R+PD D A + E ++ +IV +G S Sbjct: 731 GARMRERFGVDVQAMPADDGIVLRLPDLDLPEGQSPDVADLVALEASEVAEIVTAEIGGS 790 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 ALFA+RFRECAARALL+P R PG R PLWQQR RA+ LLE+A + FP++LET+RECL Sbjct: 791 ALFASRFRECAARALLLPRRQPGKRQPLWQQRQRAASLLEVASRFASFPIVLETVRECLS 850 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 DV+D+ LERLM L ++++ +V + PSPFA L+FGYVA+F+Y+ D+PLAERRA+ Sbjct: 851 DVFDVTGLERLMTDLAARKVRVVEVESQQPSPFARGLMFGYVAQFLYEGDSPLAERRAAA 910 Query: 894 LSLDSELLRNLLGQVD---PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGP 950 L+LD LL LLG+ + +LLDP+ +++ E+ELQRL P RR E + DLLR LGP Sbjct: 911 LALDPSLLAELLGRGEGAALRDLLDPEAVQRTEDELQRLVPERRCADAEDVADLLRVLGP 970 Query: 951 MTVEDLAQRHTGSSE-----------EVASYLENLLAVKRIFPAMISGQERLACMDDAAR 999 +T ++ R EVA +L L +R+ I+G+E A ++DA R Sbjct: 971 LTTAEVVVRSGRGEPGSQGPAALPEGEVARWLVGLEEARRLIRVRIAGEEHWAVIEDAGR 1030 Query: 1000 LRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQ 1059 LRD LG LP +PE + V+ PL LF RY R T +A F +G A+ + L+ Sbjct: 1031 LRDGLGTPLPVGIPEAFTEPVADPLAGLFGRYARTRGPFTVLDVAARFGVGRAVAHDALR 1090 Query: 1060 QLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQG 1113 +L+ G ++ + + +V R LR RSL A R PV AR L QG Sbjct: 1091 RLQSAGRLVEGELRPGGTGLEFCDADVLRILRRRSLAALRADVEPVPPRDLARFLPAWQG 1150 Query: 1114 VLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEML 1173 V GVDGV+R +EQLAG +PAS E +L ARV YS ML Sbjct: 1151 VSTGLRS-----------RLRGVDGVLRAVEQLAGAVVPASAVEPLVLAARVEGYSPAML 1199 Query: 1174 DELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFT-PAEADQANRSALQQAIVAVLAD 1232 DEL A G V+WSG L DDG V+LH + A + P +++ + L +A++ LA Sbjct: 1200 DELTAAGEVVWSGHGSLPGDDGWVSLHPADLAPLTLPDPRDSEIDLDTELHRAVLDALAG 1259 Query: 1233 GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNAR-- 1290 GGA+F + +S + S D L LW LVW G +T+D APLR + Sbjct: 1260 GGAYFFRALSDAVG-----STDDPGLTSVLWDLVWAGRLTNDTLAPLRNRLGGRGAHKPR 1314 Query: 1291 ---TSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENML 1347 +R + AR R + V P+ AGRWSLL + T R A AE +L Sbjct: 1315 AAAPRSRYARTARPARGLRGTRVELPSRSGPPSAAGRWSLLPEIEADATVRAHASAEVLL 1374 Query: 1348 DRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR 1407 DR+G+++R AV +E +PGGF ++ + + ED+GR RG FVEGLG +QFA +DRLR Sbjct: 1375 DRHGVLTRGAVASERVPGGFAAVYRVLAAFEDAGRARRGYFVEGLGASQFATTGAVDRLR 1434 Query: 1408 DL-----------ATQATQTRHYTPVALSANDPANVWGNLLPWPAHP------ATLVPTR 1450 D ++ + V L+A DPAN +G LPWP P + P R Sbjct: 1435 DSARPVGGDSPSQRRESRRDAGPGAVVLAATDPANPYGAALPWPERPEVTAGASGHRPGR 1494 Query: 1451 RAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVN 1510 +AGALVVV G L+LY+ +GG+ +L W + E L P AL ++R + T+ + + Sbjct: 1495 KAGALVVVVDGDLVLYVERGGRSVLSWTQDPETLQPAA-DALALSVRDGVLGKLTVEKAD 1553 Query: 1511 DLPVRQ--TPMFTLLREAGFSSSPQGLD 1536 V Q +P+ L AGF ++P+GL Sbjct: 1554 GSGVLQADSPLAQALESAGFHATPRGLR 1581 >UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomycetales RepID=B2HDY0_MYCMM Length = 1539 Score = 1494 bits (3869), Expect = 0.0, Method: Composition-based stats. Identities = 723/1580 (45%), Positives = 944/1580 (59%), Gaps = 90/1580 (5%) Query: 2 ADNPDPSSLLP-DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 P+P P FS TR+WF F PT Q W A ++ LVIAPTGSGKTLA Sbjct: 3 TARPEPLGPEPLGRFSAITREWFTNTFAAPTPAQASAWAAIAAGDNTLVIAPTGSGKTLA 62 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL+ALD L R + +R+LY+SP+KAL DV+RNL+ PL G+ RRG Sbjct: 63 AFLWALDSLAR-------CPDRTAGTRVLYVSPLKALAVDVERNLRTPLAGLTRLAERRG 115 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 + VG+R+GDTP R +L PPD+LITTPESL+LMLTS ARETL GV+TVI+DE Sbjct: 116 LPPPQISVGVRSGDTPPAVRRQLITRPPDVLITTPESLFLMLTSAARETLAGVQTVIVDE 175 Query: 181 VHAVAGSKRGAHLALSLERLD-----ALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 +HA+A +KRGAHLALSLERLD AQRIGLSATVR ++A FL G P T+ Sbjct: 176 IHAIAATKRGAHLALSLERLDQLAPDRRAGPPAQRIGLSATVRPPEELARFLSGSAPTTI 235 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 V P + + + + VPVA+M +++ +IWP +E+ ++D + H ST Sbjct: 236 VAPHSAKTFDLTVQVPVADMANLA--------------NNTIWPDVESRLVDLIESHNST 281 Query: 296 IVFTNSRGLAEKLTARLNELYAAR--LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 IVF NSR LAE+LTARLNE++A R + A S + + +AR Sbjct: 282 IVFANSRRLAERLTARLNEIHAERSGMTLPSEANTQVAGGAPAQIMASGQTFGAATLLAR 341 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 +HHGSVSKEQRA E+ LK G L+ VVATSSLELGIDMGAVDLVIQV P SVASGLQRI Sbjct: 342 AHHGSVSKEQRAQVEEDLKRGALKAVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRI 401 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GRAGHQVG VS+G+ FP+ R DL+ A+ V+ M G++E + P NPLD+LAQ TVAAAA Sbjct: 402 GRAGHQVGEVSRGVLFPKHRTDLLGCAISVQRMRTGQIETMRVPANPLDILAQHTVAAAA 461 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 ++ L D+W+ VRR+A + LPR VF+ATLD+LSG+YPS +F+ RP+LV++R TG LT Sbjct: 462 LEPLDADQWFDTVRRSASFATLPRSVFEATLDLLSGKYPSTEFAELRPRLVYDRGTGTLT 521 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGAT 593 ARPGAQ LAVTSGG IPDRG+++V L EK RVGELDEEMVYESR D+I+LGAT Sbjct: 522 ARPGAQRLAVTSGGAIPDRGLFTVYLASEAEKPS--RVGELDEEMVYESRPGDVISLGAT 579 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGT 651 SWRI +IT D+V+V PAPG ARLPFWRG+ GRPAELG +G LA D A F Sbjct: 580 SWRITEITHDRVLVIPAPGEPARLPFWRGDDVGRPAELGAALGALTGELARLDRAEFDKR 639 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 ++ N+ GL+++Q+ AT +VP L++ER RDE+GDWR+ILHSPYG RVH Sbjct: 640 CAGLGFDDFATDNLWGLLDDQKTATRVVPTDTTLLVERFRDELGDWRVILHSPYGLRVHG 699 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK-----LPDAAIFLFEPEKLLQIV 766 P A+A+ R+ +G D ASDDGIV R+PDT P A +FLF+ +++ IV Sbjct: 700 PLALAVGRRLRDRYGLDEKPTASDDGIVVRLPDTISDTGTETPPGAELFLFDADEIDAIV 759 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILE 826 VG+SALFA+RFRE AARALL+P R PG R+PLW QR RA+QLL++A+ YPDFP++LE Sbjct: 760 TAEVGASALFASRFRESAARALLLPRRHPGRRSPLWHQRQRAAQLLDVARKYPDFPMVLE 819 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 T+RECLQDVYD+P L LM + +++++ TT PSPFA SLLFGYV FMY+ D PL Sbjct: 820 TVRECLQDVYDVPTLTTLMTDIAQRRVRVAETETTKPSPFAASLLFGYVGAFMYEGDVPL 879 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 AERRA+ LSLDS LL LLG+V+ ELLDP+VI +LQ L R A+ EG+ DLLR Sbjct: 880 AERRAAALSLDSTLLAELLGRVELRELLDPEVIAATGRQLQHLCADRAARDAEGVADLLR 939 Query: 947 ELGPMTVEDLAQRHTGS-SEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALG 1005 LGP+T +++A R + ++ +LE L A +R +G+ ++D RLRD +G Sbjct: 940 LLGPLTEDEVAARSDTTGGTDIGGWLEGLRAARRALEVSYAGRSWWVAVEDIGRLRDGVG 999 Query: 1006 VRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQG 1065 +P LP + V+ PL +L RY R H T + A F LG+ + + L +L G Sbjct: 1000 AAVPVGLPAAFTEAVADPLAELLGRYARTHPPFTTAEAAGRFGLGLRVTADVLGRLASDG 1059 Query: 1066 LVMNLQ-----------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGV 1114 ++ + W EV R LR RSL A R PV+ Y R L E V Sbjct: 1060 RLVRGDFVATGVFGGAGSEQWCDAEVLRILRRRSLAALRAQVEPVSTAAYGRFLPEWHQV 1119 Query: 1115 LPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLD 1174 A G+D + VI+QLAGV +PAS E +L RVRDYS MLD Sbjct: 1120 GGADSSHG------------GIDRLASVIDQLAGVRIPASALEPLVLAPRVRDYSPAMLD 1167 Query: 1175 ELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGG 1234 ELLATG V W+G + DG V LHL + A + A + +AI+ LA GG Sbjct: 1168 ELLATGEVTWAGAGSISGSDGWVTLHLADSAPLTL--AAPAEIEFGEAHRAILDTLAGGG 1225 Query: 1235 AWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN--ARTS 1292 A+F +Q+ IG+ D +A++ ALW L+W G + D +AP+RAL + S Sbjct: 1226 AYFFRQL-------IGDIPDEAAIKAALWELIWAGRVCGDTFAPVRALLGGGGPGSRKRS 1278 Query: 1293 TRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGI 1352 R R + P +AGRWSLL + T R AE +L+R+G+ Sbjct: 1279 APAHRGHRPPRLSRYSVAHAQPRSVDPTVAGRWSLLPPPEPDSTVRAHYQAELLLNRHGV 1338 Query: 1353 ISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQ 1412 +++ AV +E +PGGF ++ + + ED+GR RG FVE LGGAQFA T+DRLR Sbjct: 1339 LTKGAVASEGVPGGFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAVAATVDRLRSYLDD 1398 Query: 1413 A-----TQTRHYTPVALSANDPANVWGNLLPWPAHPA-----TLVPTRRAGALVVVSGGK 1462 ++ Y V L+A DPAN +G LPWP P R+AGALVV+ G Sbjct: 1399 PSAFTDSRRPQYQAVLLAAADPANPYGAALPWPTSDDDGSNVGARPGRKAGALVVLVDGA 1458 Query: 1463 LLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQ------ 1516 L +L +GG+ +L + + E A R + +N +PV Q Sbjct: 1459 LAWFLERGGRTLLTFTDDPEANAAAAIALADLVATR-RVGSLLVERINGVPVLQAGAGQA 1517 Query: 1517 TPMFTLLREAGFSSSPQGLD 1536 + T L +AGF +P+GL Sbjct: 1518 SLAVTALADAGFLRTPRGLR 1537 >UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AY23_STRRD Length = 1620 Score = 1464 bits (3789), Expect = 0.0, Method: Composition-based stats. Identities = 726/1643 (44%), Positives = 938/1643 (57%), Gaps = 156/1643 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F+P TRDWF AF PTA Q W AR ++ LV+APTGSGKTLAAFL++LDRL E Sbjct: 12 DHFTPVTRDWFTGAFASPTAAQEGAWASIARGDNTLVVAPTGSGKTLAAFLWSLDRLAAE 71 Query: 73 GGEDTREAHKRKT---------------SRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T + R+LY+SP+KAL DV+RNL+ PL G+ R Sbjct: 72 RAAATGGPAEDAAGGRRRSREDDAPAGQCRVLYVSPLKALAVDVERNLRAPLAGMRQTAR 131 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVI 177 R G + V IR+GDT QER + P DILITTPESL+L+LTS+ARE LRGVETVI Sbjct: 132 RLGLAVPEISVAIRSGDTSPQERRRFAARPSDILITTPESLFLLLTSQAREALRGVETVI 191 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +DEVHAVA +KRGAHLALSLERLDALL AQRIGLSATVR ++VAAFLGG RP V+ Sbjct: 192 VDEVHAVAATKRGAHLALSLERLDALLPQPAQRIGLSATVRPVNEVAAFLGGPRPAAVIQ 251 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDS------HAGREGSIWPYIETGILDEVLR 291 PP+ + ++++VVP+ +M ++ S + D SIWP++E + D + Sbjct: 252 PPSEKTIEVKVVVPIEDMTELDSAPRPSRPDDDDQWLLEPPARRSIWPHVEERLFDLIEE 311 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN--------- 342 H STIVF NSR LAE+L RLNEL R + G + Sbjct: 312 HSSTIVFANSRRLAERLCTRLNELAWERRAGEAEPPEPSEPAHWAGGFPAPPASLSTPAA 371 Query: 343 ------RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 + + I R+HHGSVSKE+R+ E+ALKSG L VVATSSLELGIDMGAVDL Sbjct: 372 MMAQAGAAKGTVPEIVRAHHGSVSKEERSQIEEALKSGRLPAVVATSSLELGIDMGAVDL 431 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTP 456 V V +P SVASGLQRIGRAGHQVG VS+G+ FP+ R DLV +AV+ E M +G +E L Sbjct: 432 VACVESPPSVASGLQRIGRAGHQVGAVSRGVIFPKYRGDLVQTAVVAERMKSGEIEELRY 491 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 P NPLDVLAQQ VA A+D VD+ + VRRAAP++ LPR +ATLDML+GRYPS +F Sbjct: 492 PRNPLDVLAQQIVAMTALDEWTVDDLETLVRRAAPYRTLPRGALEATLDMLAGRYPSEEF 551 Query: 517 SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 + RP++VW+R TG L RPGAQ LAVT+GGTIPDRG++ V L + RVGELDE Sbjct: 552 AELRPRVVWDRVTGTLRGRPGAQRLAVTNGGTIPDRGLFGVFLVGEKAS----RVGELDE 607 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 EMVYESR D+ LGATSWRI+ IT D+V+V+PAPG+ +LPFW G+ GRPAELG IG Sbjct: 608 EMVYESRAGDVFVLGATSWRIEDITADRVLVSPAPGQPGKLPFWHGDNAGRPAELGRAIG 667 Query: 637 DFLHLLA------------DGAFFSGTIPPWLAEENTIANI---QGLIEEQRNATGIVPG 681 FL ++ G P AE A G E G PG Sbjct: 668 AFLREMSGAGSGAGPGSGRKGGLARDAARPGSAEPGDPAGDGTRPGPGREDPARDGGKPG 727 Query: 682 S-------RHLVLER--------------------------------------CRDEIGD 696 S R +ER DE+GD Sbjct: 728 SAGQDDPARDGAMERIRAAGLDEFAAANLLSYLAEQRQATGYVPDDRTLLVERFHDELGD 787 Query: 697 WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL 756 WR+++HSPYG RVH PWA+AI R+ +G D V SDDGIV RIPDT P + + + Sbjct: 788 WRVVVHSPYGARVHAPWALAIGRRLRERYGVDVQAVHSDDGIVLRIPDTLSGPP-SDVAV 846 Query: 757 FEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQ 816 F+ E++ QIV E +G SALFAARFRECA R+LL+P RTPG RTPLWQQR RAS LL +A Sbjct: 847 FDAEEIEQIVTEELGGSALFAARFRECAGRSLLLPRRTPGKRTPLWQQRQRASHLLNVAG 906 Query: 817 GYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVA 876 Y FPV+LET+RECLQDV+D+P L RLMR ++ +++ +V T+ SPFA SLLF YV Sbjct: 907 RYGSFPVVLETMRECLQDVFDVPGLIRLMRDISARRVRLVEVETSQASPFAASLLFNYVG 966 Query: 877 EFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAK 936 FMY+ DAPLAERRA L+LD+ LL LLGQ D ELLDP VI E EL RL R + Sbjct: 967 AFMYEGDAPLAERRAQALALDTSLLAELLGQADLRELLDPDVIADTERELARL--DRPLR 1024 Query: 937 GEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDD 996 E L DLLR GP+ D++ R E ++L L + +R ++GQE+ A ++D Sbjct: 1025 DAEDLADLLRSHGPLLAADVSLR-----EGDPAWLTGLESARRAIRVRVAGQEQWAAIED 1079 Query: 997 AARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEE 1056 AARLRDALGV LP +P +L V PL DL R+ R A A F LG A+V + Sbjct: 1080 AARLRDALGVPLPVGVPHTFLEPVDDPLGDLVARHARTRTPFPASTAAARFGLGPAVVTD 1139 Query: 1057 QLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLE 1110 L++L G V++ + + W V R LR RSL R+ PV+ T A Sbjct: 1140 TLRRLAVSGRVVSGEFRPGGRGEEWCDAGVLRMLRRRSLARLRKEVEPVSPETLAVFAPA 1199 Query: 1111 RQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSS 1170 G+ A +D ++ +EQL G +PAS E+ +LP+RV Y Sbjct: 1200 WHGISGAPQRGRPP-----------IDALVSAVEQLQGAAVPASALETLVLPSRVPGYDP 1248 Query: 1171 EMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVL 1230 +LDEL ++G V+W+GQ L DG VAL+ + A + + + L +A++ VL Sbjct: 1249 SLLDELTSSGEVLWAGQGSLPGGDGWVALYFADTAPLLMP--DPVEITMTPLHEAVLEVL 1306 Query: 1231 ADGGAWFAQQISQRIRDKI-GESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 + GGA F ++++ R+ + G D L A+W LVW G IT D APLRA + A Sbjct: 1307 SGGGALFFRELAGRVGSLMAGPVPDDGMLTAAVWDLVWAGRITGDTLAPLRATLGTGRPA 1366 Query: 1290 RTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDR 1349 + P + GRW LL + T+R A AE +L+R Sbjct: 1367 HRPA----------TTRRRRPVLPTRSGPPTVGGRWWLLPGVADDPTQRAHAQAEALLER 1416 Query: 1350 YGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL 1409 +G+++R AV AE +PGGF ++ + R+ E+SGR RG FVEGLGGAQFA +DR+R Sbjct: 1417 HGVVTRGAVAAERLPGGFAAVYQVLRAFEESGRCRRGYFVEGLGGAQFALPGAVDRMRAA 1476 Query: 1410 ATQA--------------TQTRHYTPVALSANDPANVWGNLLPWPAHPA--TLVPTRRAG 1453 AT + V L+A DPAN +G LPWPAHP + P R+AG Sbjct: 1477 ATPPRSEAPGPDPWSSRRPEGNGRRAVVLAAADPANPYGAALPWPAHPGEISHKPGRKAG 1536 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLP 1513 +LVV+ G L+LY+ +GGK +L + + + L AL A+R + T+ + Sbjct: 1537 SLVVLVDGHLVLYVERGGKTLLSFTDDDRL--QPAVDALALAVRDGALGKLTVERADGTA 1594 Query: 1514 VRQTPMFTLLREAGFSSSPQGLD 1536 + +P+ L AGF +P+GL Sbjct: 1595 INDSPLGAALEAAGFHPTPRGLR 1617 >UniRef50_C0XQ89 Lhr family helicase n=2 Tax=Corynebacterium RepID=C0XQ89_9CORY Length = 1529 Score = 1451 bits (3756), Expect = 0.0, Method: Composition-based stats. Identities = 683/1559 (43%), Positives = 917/1559 (58%), Gaps = 94/1559 (6%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P WF F PTAVQ W + E+ALV+APTGSGKTLAAFL++L+ L Sbjct: 7 DRFHPQVATWFSEVFAAPTAVQEGAWRAISAGENALVVAPTGSGKTLAAFLWSLNSLVER 66 Query: 73 GGEDTREAHKR-----KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G+ ++LYISP+KALG DV+ NL+ PL GIA +R G ++ Sbjct: 67 AGQQALPIDGSARSTHGGVKVLYISPLKALGVDVENNLRAPLGGIARVAQRMGLDTPDIS 126 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 VG+R+GDTP ER++ R PPDILITTPESLYLMLTS+A L V+TVI+DE+HA+AG+ Sbjct: 127 VGVRSGDTPQAERNRQVRKPPDILITTPESLYLMLTSKAAGILTSVDTVIVDEIHALAGT 186 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRG HLALSLERL + QRIGLSATVR +VA FLG T+VNPPA + + Sbjct: 187 KRGVHLALSLERLRRITGP-FQRIGLSATVRPLEEVANFLGPK--TTIVNPPAEKKWSLG 243 Query: 248 IVVPVANMDDV----------SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 + VPV ++ D+ +V + + G SIWP+IE + D+V+ HRSTIV Sbjct: 244 VHVPVEDLSDLPVPEEASTIGEAVVDDLLDPAPVGASKSIWPHIERAVYDKVMAHRSTIV 303 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 F NSR AE+LT++LNEL+AA +++ + + + + IAR+HHG Sbjct: 304 FVNSRRTAERLTSQLNELWAAE-HDPDALSPALRRPPAQLMKSVDTAGHAQTLIARAHHG 362 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 SVSKE+R TE LK G L+ V++TSSLELGIDMGAVDLVIQV +P SVASGLQR+GRAG Sbjct: 363 SVSKEERLTTETMLKEGTLKAVISTSSLELGIDMGAVDLVIQVESPPSVASGLQRVGRAG 422 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 H VG S G F+P+ R DLV +AV V M AG +E L P +PLDVL QQT+AA A++ + Sbjct: 423 HSVGETSVGAFYPKHRSDLVQTAVTVPRMRAGLIEELRTPLSPLDVLTQQTIAAVAVEDV 482 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG 537 VDEW+ VR A P+++L R VFDA +D++ G YPS DF+ +P+ + + +L ARPG Sbjct: 483 DVDEWFDTVRAAWPYRNLSRDVFDAVIDLVVGVYPSTDFAELKPRAILD--GTVLKARPG 540 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 AQ +AVT+ GTIPDRGM+ V L E RRVGELDEEMVYESRV D+ TLGA+SWRI Sbjct: 541 AQRVAVTNAGTIPDRGMFGVFLVGSE--GAPRRVGELDEEMVYESRVGDVFTLGASSWRI 598 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA 657 + ITRDQV V+PAPG + RLPFW G+ GRP ELG+ +G+F G + Sbjct: 599 ENITRDQVQVSPAPGHTGRLPFWTGDSLGRPYELGKALGEFRRQARSGPLDASL------ 652 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 +E N+ ++EQ ATGI+P LVLER DE+GDWR++LH+P+G+ V+ WA+A Sbjct: 653 DEFARRNLIAYLDEQEEATGIIPDDTTLVLERFTDELGDWRVVLHTPFGKGVNAAWALAA 712 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 RI G DA VA DDGIV R+P + + PD+++F F+ +++ IV VG+SALFA Sbjct: 713 GWRISQETGMDAQAVAGDDGIVLRLPQGEKE-PDSSLFAFDADEITDIVTAQVGNSALFA 771 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD 837 +RFRECAARALL+P R PG R PLWQQR RA QLL++A+ YP FP+ILET+RECLQDVYD Sbjct: 772 SRFRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDVARNYPSFPIILETVRECLQDVYD 831 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 LPAL +M+ L I++++VTT PSPFA+SLLF Y FMY+ D PLAE+RA+ LSLD Sbjct: 832 LPALREVMQHLQTRRIRVAEVTTDQPSPFASSLLFNYTGAFMYEGDTPLAEKRAAALSLD 891 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 LL LLG V+ ELLD +I +V+ L+R+ +A E D LR +GP+ +++L Sbjct: 892 PSLLAKLLGTVELRELLDADIIAEVDASLRRVG---KALTSEQFADTLRIVGPVPLDEL- 947 Query: 958 QRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYL 1017 + +S + S E L A R+ I G+ +A DA LRD LGV +P + + Sbjct: 948 --DSYTSVPLVSLEEALGA--RVMRVRIGGRSHIAQALDAPLLRDGLGVPVPPGV-AAQV 1002 Query: 1018 HRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL------Q 1071 ++ L L R++R LA F L + L L + G V+ Sbjct: 1003 ATINDALAQLVSRWVRTRGPFVLRDLADAFGLAVGAAYSALAPLLDSGKVIEGRYRQGVT 1062 Query: 1072 QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPG 1131 + +V+ EV R +R RSL AAR TRPV+ + + R L V PA Sbjct: 1063 EQEYVAAEVLRIIRSRSLAAARAQTRPVSQSAFGRFLPSWSHVAPAGQ----------VA 1112 Query: 1132 VYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG 1191 G DGV V+EQLAGV LPAS WES +LP+RV DYS MLDEL A+G + G K G Sbjct: 1113 ALRGADGVYTVLEQLAGVRLPASAWESHVLPSRVGDYSPAMLDELTASGEISIVGAGKAG 1172 Query: 1192 EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGE 1251 D + L +YA + ++ + S Q ++ + GG + + Q Sbjct: 1173 ARDPWLMLLPTDYAGQLMP--DSTEPTMSLTQAQVMEKIRGGGGFLFTDLLQ-------- 1222 Query: 1252 SVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA--RRGRPVYAQP 1309 + L+E++W LV G + D +AP+RA + A + RR R+ R GR +A Sbjct: 1223 GTTVEELRESMWDLVEAGFVAPDSFAPIRARLSGGTTAHRAKRRPSRSRVRTGRTSFAT- 1281 Query: 1310 VSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPS 1369 P++ GRW+ + T R +A E LDRYG+++R +V+AE++ GGF Sbjct: 1282 ------LTPPDMVGRWAATPGVDTDATRRSVAFGEAWLDRYGVVTRGSVVAEDVLGGFAL 1335 Query: 1370 MQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYTPVA 1423 + E+SG+ MRG +EGLG +QF+ TIDRLR D+ + TR Sbjct: 1336 AYKVLSGFEESGKAMRGYLIEGLGASQFSTPATIDRLRGHQDSDDVVGWPSGTREPLVYV 1395 Query: 1424 LSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEEL 1483 L+A DPAN +G LPWPA PTR AGA+VV+ G L ++ +GGK M + E Sbjct: 1396 LAATDPANPYGAALPWPAQG----PTRSAGAMVVLIDGLLAAHITRGGKTMTTFFEHFPE 1451 Query: 1484 LA----PEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 P V AL+ A+ + ++N LR+ G + + +G G Sbjct: 1452 GVGDPMPLVVSALSQAVAAGRMKPLNVQKLNGKAAFS------LRDYGAAVTHKGAKIG 1504 >UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HC38_ARTCA Length = 1729 Score = 1438 bits (3723), Expect = 0.0, Method: Composition-based stats. Identities = 720/1716 (41%), Positives = 958/1716 (55%), Gaps = 203/1716 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF---- 70 F+ TRDWFL AF +PT Q W+ + HALV+APTGSGKTLAAFL+ALDRL Sbjct: 22 FTRPTRDWFLGAFTEPTPAQDGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLLSAAP 81 Query: 71 ----------------------REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIP 108 + + R ++ +++LYISP+KALG DV+RNL+ P Sbjct: 82 APDTESLAEAAVPAAAAGTKGTKAPAKARRPRAPKRKTKVLYISPLKALGVDVERNLRSP 141 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE 168 L GI +R G + VG+R+GDT +R L NPPDILITTPESL+LMLTSRARE Sbjct: 142 LIGITQTAKRLGMPAPLITVGVRSGDTTTADRRALLSNPPDILITTPESLFLMLTSRARE 201 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 TL V+T+IIDEVHAVAG+KRGAHLA+SLERLDALL AQRIGLSATV VA FL Sbjct: 202 TLTEVDTIIIDEVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPKELVAQFLA 261 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS--GTGEDSHAGREGSIWPYIETGIL 286 G PV +V PP+ ++ + + VPV +M D+ A +G S + SIWP++E I+ Sbjct: 262 GTAPVEIVAPPSKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIV 321 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSG-------- 338 D VL ++STIVF NSR L+E+LTARLNE+YA R + D + + Sbjct: 322 DLVLANQSTIVFANSRRLSERLTARLNEIYAERQLMAAGGGWDGSLADGAEAFDAPGNGS 381 Query: 339 -----------------ATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 A + +D +AR+HHGSVSK+QRA+ E LKSG LRCVVA Sbjct: 382 APPSGVPASTATPAHMMAQAGSSAGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVA 441 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAGHQVG +S+G+ FP+ R DLV +A+ Sbjct: 442 TSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGEISQGVLFPKHRADLVHTAI 501 Query: 442 IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFD 501 VE M G++E L+ P NPLD+LAQQTVAA A+ ++ V+EW++ VRR+AP+ LPR F+ Sbjct: 502 TVERMLDGKIERLSIPANPLDILAQQTVAATALGSIDVEEWFATVRRSAPFASLPRSAFE 561 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 ATLD+L+GRYPS +F+ RP+++W+R G + RPGAQ LAVTSGGTIPDRG++ V + Sbjct: 562 ATLDLLAGRYPSDEFAELRPRIIWDRNEGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIG 621 Query: 562 GEEKA---------------GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 E + G RRVGELDEEMVYESRV D+ LGATSW+I+ IT D+V+ Sbjct: 622 TEMEGSASPSEDGKPAPAPKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVL 681 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIAN 664 V+PA G+ +LPFW+G+ GRP +LG +G F+ L+ D + + N Sbjct: 682 VSPAFGQPGKLPFWKGDSLGRPVDLGRALGAFVRELSASDAGPAAERCQASGLDAFAANN 741 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 + + EQ+ AT +VP LV+ER DE+GDWR+ILHSP+G VH PWA+A+ R+H Sbjct: 742 LIQYLSEQKQATEVVPSDTTLVVERFHDELGDWRVILHSPFGMPVHAPWALAVGQRLHQR 801 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 +G D S +A+DDGIV R+P + + P A +FLF+PE+L QIV VG SALFA+RFRECA Sbjct: 802 YGLDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASRFRECA 861 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 ARALL+P +TPG R PLWQQR R++QLL++A+ YP FP++LET+RECLQDVYDLPAL+ + Sbjct: 862 ARALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPALKDI 921 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 + E+++ TT PSPFA SLLFGYVA+F+Y+ D+PLAERRA+ L+LDS LL L Sbjct: 922 AAAVERRELRVVQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTLLNEL 981 Query: 905 LGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSS 964 LG+V+ ELLD +VI E ELQRL P RR +G EG+ DLLR LGP+ ++ A R + Sbjct: 982 LGRVELRELLDAKVIDATERELQRLVPDRRVRGLEGVADLLRLLGPLDPDEAAARLEPAG 1041 Query: 965 EEVASYLENLLAVKRIFPAMISGQER-LACMDDAARLRDALGVRLPESL--PEIYLHRVS 1021 ++ A + LA DA D P P I V Sbjct: 1042 GVESAAGVEPATAGEPIEAPEAEPVGTLAAQADAGLADDLAPEPEPVEATPPPIASATVE 1101 Query: 1022 YPLRDLFLRYLRAHA---------LVTAEQLAHE-------------------------- 1046 L A A + A Sbjct: 1102 KATAHLVALQRANRAIKVNIGGAERFAAVEDAARLRDAIGVPLPMGVPLAFIEPVADPLG 1161 Query: 1047 ---------------------FSLGIAIVEEQLQQLREQGLVMNLQQD------------ 1073 LG+A+V L++L + G V+ + Sbjct: 1162 DLVSRYARTHGPFTAAEAAARLGLGVAVVGTALKRLADDGRVVEGEFRPHATPAAAGPEA 1221 Query: 1074 ------------------------------IWVSDEVFRRLRLRSLQAAREATRPVAATT 1103 W EV R+LR RSL A R PV A Sbjct: 1222 TPTGREDDGQPDGDGRQEETLREMVHAAVSEWCDAEVMRKLRRRSLAALRAEVEPVDAAA 1281 Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 Y R L Q V G G+DG++ I+QL+GV +PAS WE IL Sbjct: 1282 YGRFLPAWQNVRIPGGGRG-------QPSLRGLDGIVTAIDQLSGVPIPASAWEPLILAG 1334 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQ 1223 RV +Y MLDEL+A G V+WSG L +DG ++LHL + A + PA + + L Sbjct: 1335 RVSNYQPAMLDELMAAGEVLWSGAGALPGNDGWISLHLADSAELTLNPAPDYEPGDAGL- 1393 Query: 1224 QAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 + + + +GG +F +Q+++ + + + + ALW L W G IT D +AP+R+L Sbjct: 1394 RLLDHLRNNGGGYFFRQLTE-VAGGMDSVLSDQEVVSALWDLAWAGRITGDTFAPVRSLI 1452 Query: 1284 RSSSNARTSTRRSHRARRGR-----------------PVYAQPVSPRVSYNTPNLAGRWS 1326 A ++ R+R R + S P AGRWS Sbjct: 1453 AGGHTAHRQVAKAPRSRAPRLNRLGRSHGTGLMGSAGLAGGRYGSQGAVATPPTAAGRWS 1512 Query: 1327 LLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRG 1386 L L+ T A AE +LDRYG+++R +V+AE I GGF M + +E++GR RG Sbjct: 1513 ALPQPELDATIHARATAELLLDRYGVVTRGSVMAEQILGGFGLMYKVLARLEEAGRCRRG 1572 Query: 1387 RFVEGLGGAQFAERLTIDRLRDLATQAT-QTRHYTPVALSANDPANVWGNLLPWPA---- 1441 F+E LG AQFA T+DRLR A + +AL+A DPAN +G LPWPA Sbjct: 1573 YFIEHLGAAQFAVPATVDRLRSYAEDSQIAKAEPVALALAATDPANPYGAALPWPALRDD 1632 Query: 1442 HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPR 1501 P R+AGALVV+ G L+LY+ +GGK +L + + +L AL + R Sbjct: 1633 AGTGHRPGRKAGALVVLVDGALVLYVERGGKTLLAFSDDPTIL-DAAGAALVGVVTRGAV 1691 Query: 1502 LRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 + + +VN + TP+ L AG S+P+GL Sbjct: 1692 DKLIMEKVNGQGILDTPIAAALSAAGAYSTPKGLRI 1727 >UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia sp. EuI1c RepID=D1VBA8_9ACTO Length = 1675 Score = 1412 bits (3654), Expect = 0.0, Method: Composition-based stats. Identities = 743/1703 (43%), Positives = 953/1703 (55%), Gaps = 210/1703 (12%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 P S FS TR WF AF PT Q W ALV+APTGSGKTLAAFL++L Sbjct: 2 PDSDPLAAFSAPTRAWFQAAFPAPTPAQAGAWAAVRAGGSALVVAPTGSGKTLAAFLWSL 61 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 D L R G A + R+LY+SP+KAL DV RNL+ PL GI R G+T + Sbjct: 62 DELVRSGPP----ADPTRRCRVLYVSPLKALAVDVARNLRAPLAGIQAAATRLGQTVPEI 117 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 R+G+RTGDTPA ER R PPDILITTPESL+L+LTS+ARE LR VETVI+DEVHAVA Sbjct: 118 RIGMRTGDTPATERRAFGRTPPDILITTPESLFLVLTSQAREALRAVETVIVDEVHAVAS 177 Query: 187 SKRGAHLALSLERLDALLHTS-----------AQRIGLSATVRSASDVAAFLGGDRPVTV 235 +KRGAHLALSLERLDAL + A+RIGLSATVR +VA FLGG RPVTV Sbjct: 178 TKRGAHLALSLERLDALRTSESGGDPAPAAAPARRIGLSATVRPVEEVARFLGGTRPVTV 237 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSV-------------------ASGTGEDSHAGREGS 276 V PPA + + +VVPV +M D + + G + + S Sbjct: 238 VRPPARKTLLVDVVVPVRDMADPGAPDGLAGLTAPGGVSGLPTLESLADGPPAAEPAKPS 297 Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH---- 332 IWP +E +LD + H STIVF NSR +AE+L ARLNEL+ RL + + +V Sbjct: 298 IWPAVEARVLDLIEAHTSTIVFANSRRVAERLCARLNELHTERLIAAENASVHRGGGRID 357 Query: 333 -------------------------------FESTSGATSNRVQSSDVFIARSHHGSVSK 361 E A R +AR+HHGSVS+ Sbjct: 358 LDGPPAGPPDGQSDELDGPLGYHAEPTRVTPAEVMGAAGLARGSLPTAEVARAHHGSVSR 417 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 EQR + E+ LK+G L VVATSSLELGIDMGAVDLV+Q+++P SVA+G+QR+GRAGHQVG Sbjct: 418 EQRLLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQISSPPSVAAGMQRVGRAGHQVG 477 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 S+G+ P R DL+++AV+ E M G +E P NPLDVLAQQ VA A+D V E Sbjct: 478 VESRGVVLPSHRADLLEAAVVAERMRDGAIEEARYPRNPLDVLAQQIVAMTAVDTWPVAE 537 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 + VRRAAP+ LP F+A LDMLSGRYPS F+ RP++VW+R + RPGAQ L Sbjct: 538 LGALVRRAAPFATLPGGAFEAVLDMLSGRYPSDAFAELRPRIVWDRAANTVAGRPGAQRL 597 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT 601 AVTSGGTIPDRG++ V L + RVGELDEEMVYESRV D++ LG++SWRI++IT Sbjct: 598 AVTSGGTIPDRGLFGVFLVGEKAS----RVGELDEEMVYESRVGDVVLLGSSSWRIEEIT 653 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGA--FFSGTIPPWLAEE 659 D+V+VTPAPGR RLPFW G+ GRPAELG +G FL L + + +E Sbjct: 654 PDRVLVTPAPGRPGRLPFWHGDSPGRPAELGRALGAFLRELTRKSPQDAEARLRQAGLDE 713 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 +N+ ++EQR A G + R LV+ER RDE+GDWR+ +HSP+G RV+ PWA+AIAG Sbjct: 714 WATSNLLAYLDEQREAAGRLSDDRTLVVERFRDELGDWRLAVHSPFGARVNAPWALAIAG 773 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 R+ +GA+ V+ +DDGIVAR+PD D A + +F+P+++ +VR VG+SALFA+R Sbjct: 774 RLRERYGAEVQVMHTDDGIVARVPDADAAPGAADV-VFDPDEIAAVVRTEVGASALFASR 832 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRECA RALL+P R+PG RTPLWQQR R++ LL +A G+ +FPV+LET+RECLQDV+D+P Sbjct: 833 FRECAGRALLLPRRSPGRRTPLWQQRQRSAALLSVAAGFENFPVVLETMRECLQDVFDVP 892 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 AL L R ++ +++ +V T PSPFA SLLFGYVA F+Y DAPLAERRA +LSLDS Sbjct: 893 ALVELHRDVDARRLRVVEVETPAPSPFARSLLFGYVATFLYDGDAPLAERRAQMLSLDSR 952 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 LL LLG+ D EL+DP + +VE EL RLAP RRA+ EG DLLR LG +T + R Sbjct: 953 LLAELLGETDLRELIDPTALAEVEAELARLAPDRRARDVEGAADLLRVLGDLTTAEALAR 1012 Query: 960 HTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHR 1019 +L L A R I+G+ER ++DA RLRDALGV LP +P + Sbjct: 1013 GATE-----EWLRALAAAGRALEVRIAGEERWVAVEDAGRLRDALGVPLPMGVPTAFTEP 1067 Query: 1020 VSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QD 1073 V PL DL R+ R AE+LA F LG+++ L++L G ++ + + Sbjct: 1068 VRDPLGDLVSRFTRTRGPFDAEELAARFGLGVSVAVGALERLVGAGRLVRGELRPGRTGE 1127 Query: 1074 IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVY 1133 W EV RRLR RSL A+R V L Q V G Sbjct: 1128 QWCDAEVLRRLRRRSLAASRREVEAVPPRALGAFLPAWQAVTA--------------GRS 1173 Query: 1134 EGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGED 1193 GVD V R +EQL G +PAS WE +LPARV DYS MLDEL ATG V+W+G L D Sbjct: 1174 RGVDAVARAVEQLQGALIPASAWEQLVLPARVADYSPAMLDELCATGEVLWAGAGGLPGD 1233 Query: 1194 DGLVA-----------LHLQEYAAESFTPAEA---------------------------- 1214 DG V L A ++ P+ + Sbjct: 1234 DGWVTLMLADAAPLLLPALAARAGDTGEPSPSSRAATVDLAALATGEAGERPADGSQHPP 1293 Query: 1215 ---------DQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWAL 1265 D A + L +A++ LAD A F + +S R+ S+D +AL +W L Sbjct: 1294 TDDGPDLMIDDAAATPLHRAVLDALADDQALFFRTLSDRVG-----SLDDTALAGVIWDL 1348 Query: 1266 VWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVY-------------AQPVSP 1312 VW G+IT+D APLRA S R R +P +P Sbjct: 1349 VWAGLITNDTLAPLRARLSGGSATTHRAPPRPRRSTMRFASGYGAGLTGTGRGAGRPATP 1408 Query: 1313 RVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQT 1372 R P +AGRWSLL + T R ALAE +LDR+G+++R AV+AE PGGF ++ Sbjct: 1409 RRG-GPPMVAGRWSLLPPRDTDPTRRAHALAETLLDRHGLVTRGAVVAERAPGGFAAVYR 1467 Query: 1373 LCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLA---------------------- 1410 + + ED+GR RG FVEGLG AQFA +DRLR +A Sbjct: 1468 VLSAFEDAGRARRGYFVEGLGAAQFAMPGAVDRLRAVAATQRAADEEPDWVEQPGGITGA 1527 Query: 1411 --------------TQATQTRHYTPVALSANDPANVWGNLLPWPAH-----PATLVPTRR 1451 A + V L+A DPAN +G LPWPA P R+ Sbjct: 1528 LGAVAFPAPGGRAQPGARRETDRRAVVLAATDPANPYGAALPWPARSEDPDGPGHRPGRK 1587 Query: 1452 AGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVND 1511 AGALVV+ G L+LY+ +GGK +L W E L P AL A+R + + + Sbjct: 1588 AGALVVLVDGDLVLYVERGGKTLLSWPEPARALQP-AVDALALAVRDGWLGQLAVERADG 1646 Query: 1512 LPVRQTPMFTLLREAGFSSSPQG 1534 + + + L AGF +P+G Sbjct: 1647 RAITGSALGDALVRAGFHPTPRG 1669 >UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacteria RepID=A8L6I9_FRASN Length = 1613 Score = 1411 bits (3652), Expect = 0.0, Method: Composition-based stats. Identities = 706/1443 (48%), Positives = 894/1443 (61%), Gaps = 69/1443 (4%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 FS TR+WF +F PT Q W A E ALV+APTGSGKTLAAFL++LD L R Sbjct: 19 AFSAPTREWFASSFAAPTPAQAGAWAAVAGGESALVVAPTGSGKTLAAFLWSLDSLARSA 78 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 A + R+LY+SP+KAL DV+RNL+ PL GI R G ++ VG+R+G Sbjct: 79 PP----ADPARRCRVLYVSPLKALAVDVERNLRAPLTGIRAAATRLGLPVPDVSVGVRSG 134 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTPA ER R PPDILITTPESL+L+LTS RE LRGVETVI+DEVHAVAG+KRGAHL Sbjct: 135 DTPAAERRAFGRTPPDILITTPESLFLILTSATREALRGVETVIVDEVHAVAGTKRGAHL 194 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERLD LL AQR+GLSATVR +VA FLGG RPVTVV PPA + I +VVPV Sbjct: 195 ALSLERLDDLLDVPAQRVGLSATVRPVDEVARFLGGPRPVTVVRPPAAKTLHIDVVVPVE 254 Query: 254 NMDDVSSVASGTGEDSHAGR--EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 +M ++ VA E S AG SIWP +E +LD +L H STIVF NSR LAE+L AR Sbjct: 255 DMANLGEVAGAVPEGSAAGAAPRASIWPAVEEKVLDLILGHSSTIVFANSRRLAERLCAR 314 Query: 312 LNELYAARLQRSPSIAVDAAHF-----------------------ESTSGATSNRVQSSD 348 LNELYA RL + + GA + V ++ Sbjct: 315 LNELYADRLATADATGDPDGQETGGWESGGWESGERAGPAGSRAPAEIMGAAGSAVSPAE 374 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVAS 408 V +AR+HHGSVS+EQR + E+ LK+G L VVATSSLELGIDMGAVDLV+Q+ +P SVA+ Sbjct: 375 VEVARAHHGSVSREQRMLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQIESPPSVAA 434 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 G+QRIGRAGHQVG S+G+ P+ R DL++ AV+ E M GR+E + P NPLDVLAQQ Sbjct: 435 GMQRIGRAGHQVGAASRGVVLPKHRSDLLECAVVAERMSDGRIEAVRYPRNPLDVLAQQI 494 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 VA A++ +VDE + VRRAAP+ LP ++A LDML+GRYPS DF+ RP++ W+R Sbjct: 495 VAMVAVEDREVDELGALVRRAAPFATLPASAYEAVLDMLAGRYPSDDFAELRPRITWDRA 554 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDII 588 TG+L RPGAQ LAVTSGGTIPDRGM+ V L + RVGELDEEMVYESRV D++ Sbjct: 555 TGVLAGRPGAQRLAVTSGGTIPDRGMFGVFLVGEKAS----RVGELDEEMVYESRVGDVV 610 Query: 589 TLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL--ADGA 646 LG++SWRI++IT D+V+VTPAPGR RLPFW G+ GRPAELG +G FL L A Sbjct: 611 LLGSSSWRIEEITPDRVLVTPAPGRPGRLPFWHGDAPGRPAELGRALGAFLRELSAASPR 670 Query: 647 FFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYG 706 + + + AN+ ++EQR A G + R +V+ER RDE+GDWR+ +HSP+G Sbjct: 671 DAADRVRAAGLDTWATANLLTYLDEQRAAAGHLSDDRRIVVERFRDELGDWRLAVHSPFG 730 Query: 707 RRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIV 766 V+ PWA+AI R+ +GA+ ++ +DDGIVAR+PD + P+A + +FEPE+ +V Sbjct: 731 APVNAPWALAIGARLRERYGAEVQIMHTDDGIVARVPDA-AEPPEAELVVFEPEETEALV 789 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILE 826 R VG SALFA+RFRECA+R+LL+P RTPG RTPLWQQR R++ LL +A + DFPV+LE Sbjct: 790 RAEVGGSALFASRFRECASRSLLLPRRTPGRRTPLWQQRQRSAHLLSVASTFGDFPVVLE 849 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 T+RECLQDVYD+PAL LMR + +++ +V T +PSPFA+SLLFGYVA FMY DAPL Sbjct: 850 TMRECLQDVYDVPALVGLMRDIGARSLRVVEVETPSPSPFASSLLFGYVAAFMYDGDAPL 909 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 AERRA VLSLDS LL LLG+ + EL+DP + ++ ELQRL P R A G E DLLR Sbjct: 910 AERRAQVLSLDSSLLAELLGEAELRELIDPGALERITAELQRLVPDRHAHGVESTADLLR 969 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGV 1006 LG +T E+ R S+L L R+ I G+ R A ++DA RLRDALGV Sbjct: 970 ALGDLTDEEAGARGVA-----PSWLAALADAGRVIRVRIGGEARWAPVEDAGRLRDALGV 1024 Query: 1007 RLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGL 1066 LP +P + V PL DL RY R H +A F LG+A+V L++L G Sbjct: 1025 PLPMGVPAAFTEPVRDPLGDLVSRYARTHGPFEPAAVAARFGLGVAVVVGALERLTAAGR 1084 Query: 1067 VMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDG 1120 ++ + + W V R LR RSL A R+ V L Q V Sbjct: 1085 LVRGELHPDRAGEQWCDAGVLRALRRRSLAALRKEVEAVPTRAMGAFLPAWQSVT----- 1139 Query: 1121 SPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATG 1180 G GVD V+R +EQL G +PAS E +LPARV DYSS MLDEL ATG Sbjct: 1140 ---------TGRGHGVDAVLRAVEQLQGAPVPASALEQLVLPARVSDYSSAMLDELCATG 1190 Query: 1181 AVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQ 1240 V+W+G L +DG V L L + A E P + D A L +AI+ LA A F + Sbjct: 1191 EVLWAGAGGLPGNDGWVTLVLADSAGELLPPPDLDAAGGD-LHRAILDALAGDQALFFRT 1249 Query: 1241 ISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR 1300 +S R+ ++D +AL +ALW LVW G++T+D A LR + A + R R Sbjct: 1250 LSDRVG-----ALDDTALADALWDLVWAGLVTNDTLAALRVQLGAGRPAHPAHPVPPRRR 1304 Query: 1301 --RGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAV 1358 RGRP + P + GRWSLL + T R ALAE++LDR+GI++R AV Sbjct: 1305 SARGRPARFGRPTMPRRAGPPTVGGRWSLLPEREPDPTRRAHALAESLLDRHGIVTRGAV 1364 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 AE PGGF ++ + + ED+GR RG FVE LG AQFA +DRLR +A Sbjct: 1365 TAERTPGGFAAVYRVLSAFEDAGRCRRGYFVESLGAAQFAVPGAVDRLRAIAGAQRDAAD 1424 Query: 1419 YTP 1421 Sbjct: 1425 QPA 1427 >UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDW5_BRAFD Length = 1601 Score = 1406 bits (3640), Expect = 0.0, Method: Composition-based stats. Identities = 725/1603 (45%), Positives = 956/1603 (59%), Gaps = 88/1603 (5%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LP FSPAT WF +F PT Q W R + LV+APTGSGKTLAAFL A+DR Sbjct: 6 QALPSSFSPATARWFEESFDAPTPAQAAAWEAIDRGDDTLVVAPTGSGKTLAAFLTAIDR 65 Query: 69 LFREGGEDTREAHKRK--------------------TSRILYISPIKALGTDVQRNLQIP 108 L R + + ++ +LYISP+KALG DV+RNL P Sbjct: 66 LASGPAPADRPSGPGRAAAGPGRGGERGGGAGRGRRSTSVLYISPLKALGVDVERNLTSP 125 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE 168 L G A GE L VG+RTGDTPA ER +L +PPDILITTPESL+LMLTS+ARE Sbjct: 126 LVGTARTAESLGEVRRPLSVGVRTGDTPAAERRRLVTHPPDILITTPESLFLMLTSQARE 185 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 TLRGVETVI+DEVHAVAG KRG HLALSL RLDALL AQRIGLSATV +VAAFL Sbjct: 186 TLRGVETVILDEVHAVAGGKRGVHLALSLARLDALLEAPAQRIGLSATVEPVEEVAAFLT 245 Query: 229 GD---RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI 285 G R VTVV P + + I + +PVA++ + A ++ G ++WP++E + Sbjct: 246 GSGRSREVTVVRPESTKRWDITVTLPVADLQSIEPPADAVDDEDVTG---TVWPHVERAV 302 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV---------DAAHFEST 336 L+ VL HRSTIVFTNSR AE+LT +LN L+A R+ + ++ + Sbjct: 303 LERVLAHRSTIVFTNSRSQAERLTGKLNRLHARRVAVDAAAGAPSADSARAGASSSGSAG 362 Query: 337 SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 +G + IAR+HHGS+SKE RA E+ LKSG LRCVVATSSLELGIDMGAVDL Sbjct: 363 AGGAGEEDGTEGEDIARAHHGSMSKEVRAGIEEQLKSGALRCVVATSSLELGIDMGAVDL 422 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTP 456 V+QVA P+SV+S LQR+GRAGH VG VS G P D++ SAV V+ AGR+E L Sbjct: 423 VLQVAAPMSVSSLLQRVGRAGHDVGAVSTGSLHPLHAADVLRSAVAVQEAVAGRIEPLAV 482 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 P N LDVLAQ TV+AAAMD LQVDEW+ VR A P++ LPR FD T+D+L+GRYPS DF Sbjct: 483 PRNALDVLAQHTVSAAAMDDLQVDEWFDLVRTAHPYRALPRSAFDQTIDLLAGRYPSTDF 542 Query: 517 SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 S RP+LV + +TGILTARPGAQ LAVTSGGTIPDRG+Y V L G++ + RRVGELDE Sbjct: 543 SELRPRLVHDHDTGILTARPGAQRLAVTSGGTIPDRGLYPVHLVAGDDDSQPRRVGELDE 602 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 EMVYESR D+ITLG TSWRI++IT +V V+PA G S R+PFW G+G+GRPA LG I Sbjct: 603 EMVYESRRGDVITLGTTSWRIEEITASRVTVSPAFGLSGRIPFWHGDGDGRPASLGRAIA 662 Query: 637 DFLHLLAD--GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEI 694 LA + + + + + EQ++ATG VPG + LV+ER DE+ Sbjct: 663 SAQSELASLPRPEAEDRLGTLGLDSDARTVLLDHLAEQQHATGTVPGPQQLVVERFLDEL 722 Query: 695 GDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAI 754 GDWR++LH G+R+ PWA+A+ R+ +G D +A+DDGIV RIP + + P A + Sbjct: 723 GDWRVVLHCALGQRITGPWALAVGARVQERYGLDGQAMAADDGIVLRIPHGE-QPPGADL 781 Query: 755 FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEI 814 F+F PE++ Q VR VGSSALFAARFRECAARALL+P R P R+PLWQQR R+S LLE+ Sbjct: 782 FVFTPEEIEQEVRRLVGSSALFAARFRECAARALLLPRRDPTQRSPLWQQRQRSSHLLEV 841 Query: 815 AQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGY 874 A+ +PDFP++LE RECLQDVYDLPAL LM ++ +++ +V T PSPFA SLLFGY Sbjct: 842 ARPHPDFPIMLEAARECLQDVYDLPALVELMEQIGRRRLEVREVETPAPSPFARSLLFGY 901 Query: 875 VAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRR 934 +A+F+Y DAPLAERR + L+LD LL LLG V ELLD +VI +VE++LQ L R Sbjct: 902 LAQFIYDGDAPLAERRTAALALDQSLLAELLGSVSLRELLDAEVIAEVEQQLQGLTAQRA 961 Query: 935 AKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACM 994 +G E + D LR LGP+T +DL++R T ++ + LE L +RI ++G+E +A + Sbjct: 962 LRGGEQIADALRRLGPLTADDLSRR-TAEGVDLEAELEQLTRARRIISVRLAGREHVAAV 1020 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 +DA LRDALG LP LP+ +L V + L R+ R A F L + Sbjct: 1021 EDAGLLRDALGTALPPGLPQAHLAPVDRAVPQLLARWARGRGPFPAADAVEAFGLAPGVA 1080 Query: 1055 EEQLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 L+QL + ++ + + WV EV RR+R SL A+R PV YAR L Sbjct: 1081 RGTLEQLTAERVLQQGEFTPGRDGEEWVEAEVLRRIRRASLAASRREIAPVPGPVYARFL 1140 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 + Q + + + DG++ V++QL GV LP S WESQ+LPAR+ D Sbjct: 1141 GQWQHLAGRRADGRRDRPT-----WRDRDGLLSVVDQLTGVSLPLSAWESQVLPARLPDV 1195 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESF----TPAEADQANRSALQQ 1224 + +LD A+G ++W+G +LG +DG + LHL E A + Sbjct: 1196 TPALLDAAFASGELVWTGHGRLGAEDGWIRLHLAEALPLGLDASALEEAAASLTEGSTAA 1255 Query: 1225 AIVAVLAD-GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 ++A+L GA QI + D+ GE++ A+ EALW L + G+IT+D + LR+ + Sbjct: 1256 RLLALLRGTPGALRHGQILTALADE-GEALAPPAVHEALWDLAFSGLITNDSFEALRSYS 1314 Query: 1284 RSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYN---------TPNLAGRWSLLQVEPLN 1334 R +++R S R A+ + + P AGRWS ++VEP++ Sbjct: 1315 RGPASSRGSRAAGRSRPLTRRGAARLSAAMMRQGAASVSELAEGPVGAGRWSAVRVEPVD 1374 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 R ALA +LDR+G+++R A+ E+IPGGF ++ + +E++G RG FV+GLG Sbjct: 1375 PAARAAALATLLLDRHGVVTRGAMDVEDIPGGFAAVYRVLAMLEENGSCRRGYFVDGLGA 1434 Query: 1395 AQFAERLTIDRLRDLATQATQTRHY-----------TPVALSANDPANVWGNLLPWPA-- 1441 +QFA +DRLRD A T VAL+ DPAN +G LPWP Sbjct: 1435 SQFAPVEAVDRLRDRCHDAEAAPGPAESPGGGGADATTVALAVTDPANPYGAALPWPELT 1494 Query: 1442 ----HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 AT+ P RRAGALV++ G + + +G K +L W EE EV L A+ Sbjct: 1495 IPPPEGATVRPARRAGALVLLRDGHVRAVVDKGAKHLLWWA--EESARDEVAAQLVRAIA 1552 Query: 1498 REPRL-RFTLTEVNDLPVRQTPMFT---LLREAGFSSSPQGLD 1536 E RL + + +N + P+ L +AG SP+ L Sbjct: 1553 EESRLPQLRIERINGHGIDSAPVAEIARALVDAGCYRSPRSLR 1595 >UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTJ5_THISH Length = 1476 Score = 1404 bits (3633), Expect = 0.0, Method: Composition-based stats. Identities = 652/1555 (41%), Positives = 883/1555 (56%), Gaps = 113/1555 (7%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T WF F +PT VQ + W A +HAL++APTGSGKTLAAFL +DRL +E Sbjct: 1 MFSRPTHTWFSDNFTEPTPVQREGWARIAAGDHALLVAPTGSGKTLAAFLAGIDRLMQEA 60 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + + R+LY+SP+KAL DV+RNL+ PL GI R GE +LRV +RTG Sbjct: 61 DDA------KAGVRVLYVSPLKALVYDVERNLRAPLTGILRTAERLGEPARSLRVDMRTG 114 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTP ER ++P IL+TTPESL+L+L S+ARE LR V TVI+DEVHA+A SKRGAHL Sbjct: 115 DTPQAERRAQLKDPAQILVTTPESLFLLLGSKARENLRTVHTVIVDEVHALAPSKRGAHL 174 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERL + QRIGLSATV A FLGGDR V +V+ A + + VPVA Sbjct: 175 ALSLERLAEITDAEPQRIGLSATVNPPELAARFLGGDREVAIVDTSAKPALDLHVEVPVA 234 Query: 254 NMDDVSSVASGT----------------GEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 +M+ V S A+ T E + E IWP + ++ + HRST++ Sbjct: 235 DMEAVQSPATTTPPGPKRGGSILGELYAREVARPTPERGIWPAMYPALVAAIRSHRSTLI 294 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 F NSRGLAE+LT RLNE+ +D + +HHG Sbjct: 295 FVNSRGLAERLTQRLNEV-------------------------------ADEPLVLAHHG 323 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 SVS E+RA E+ LK+G L+ +VATSSLELG+DMGAVDLVI V +P SVA GLQR+GRAG Sbjct: 324 SVSHERRAEIEEGLKAGRLKGIVATSSLELGVDMGAVDLVILVESPGSVARGLQRVGRAG 383 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 HQVG VS+GL +P+ R DL++ AV+ E M G LE ++ P NPLDVLAQQ VA Sbjct: 384 HQVGAVSRGLIYPKFRGDLLECAVVSEAMLEGLLEPISVPRNPLDVLAQQLVAMVCDTPR 443 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG 537 V E + VRR P+++L R + + LDMLSG YPS +F+ RP L W+R LT R G Sbjct: 444 TVSELEALVRRTHPYRELSRPLLEGVLDMLSGHYPSAEFADLRPWLAWDRAEDRLTPRRG 503 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 A + + GTIPDRG+Y+V L A R+GELDEEMV+E+R + I LGA++WR+ Sbjct: 504 APMAVRLNAGTIPDRGLYAVHL----GGADGPRLGELDEEMVFETRAGENILLGASTWRV 559 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA 657 ++IT D+VIV+PAPG +LPFW G+ GRP ELG IG L GA WL Sbjct: 560 EEITGDRVIVSPAPGEPGKLPFWHGDSLGRPVELGRRIGALTGKL--GALSQAEAARWLE 617 Query: 658 EENTIA-----NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 ++ N+ + EQ+ TG++P + +ER RDE+GDWR + SP+G R+H P Sbjct: 618 AHTPLSAFAAGNLAAYVHEQKQHTGVLPTDTAITVERFRDELGDWRACILSPFGARIHAP 677 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 W +A+ + A G + V+ +DDGIV R DTD LPDA + +PE++ +++ E + + Sbjct: 678 WGMALQNLLSARSGFEVQVMYTDDGIVLRFADTDA-LPDADELIPDPEEIEELITEQLAT 736 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 +ALFA FRE AARAL++ P RTPLW QR++++QLL YP FP++LET R+ L Sbjct: 737 TALFAGLFRENAARALMLTRNRPEGRTPLWAQRMKSAQLLATVSRYPAFPIVLETYRQAL 796 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 DV+DL L+ L+ + +++ +V T + SPFA SL+F YVA ++Y+ DAPLAERRA Sbjct: 797 SDVFDLAGLKALLADIRARRVRVDEVETRSASPFARSLVFAYVAAYIYEQDAPLAERRAQ 856 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 L+LD LL LLGQ + ELLD +V+ ++E EL RA+ + L DLLR LG Sbjct: 857 ALTLDRGLLSELLGQAELRELLDAEVLEELEAELAHETDETRARDADELHDLLRRLGDQH 916 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 +++LA+R T E+ A +LE L R I+G+ R +DA RDALGV P L Sbjct: 917 LDELARRCT---EDPAPWLETLKHSGRAAAVRIAGEPRFIAAEDAGLYRDALGVAPPPGL 973 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ- 1071 P+ +L V L L R+ R +Q A F L A V L+ L +G ++ + Sbjct: 974 PDAFLVPVPDALEQLLRRFARTRGPFVTKQAAARFGLTEAQVIPVLRALLTEGRLVQGEL 1033 Query: 1072 -----QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFA 1126 + W ++ RRL+ R+L + R PV A AR L E G+ T Sbjct: 1034 RPGGREPEWCDVDILRRLKRRTLASLRHQAAPVEARALARFLPEWHGITRETGQ------ 1087 Query: 1127 STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSG 1186 + G +M V+ QL G+ LP SL ILPARV ++ EMLD ATG V+W G Sbjct: 1088 -----RHGGAARLMDVVAQLEGLPLPWSLLAEVILPARVSGFTLEMLDMAAATGQVVWVG 1142 Query: 1187 QKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIR 1246 G DG VAL+ +E A P A L + ++ L GA F ++ ++ Sbjct: 1143 TGAQGPRDGRVALYRRERAPLLLPP--AGDLPDGPLHRTLLEHLDRRGASFYLELETAVQ 1200 Query: 1247 DKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVY 1306 E+ + + + ALW LVW G IT+D +APLRAL R S RRG Sbjct: 1201 RAHPEA-NAADFRAALWDLVWAGAITNDTFAPLRALARG-----PSKSTGRSTRRGGQAL 1254 Query: 1307 AQPVSPRVSYNTPNLAGRWSL---LQVEPLNDTERMLALAENMLDRYGIISRQAVIAENI 1363 A GRWS L+ ++DTE+ +A AE +L+RYGI+SR+A +AEN+ Sbjct: 1255 A--------------GGRWSRVSELRDPTVSDTEQAVARAEMLLERYGIVSREAALAENL 1300 Query: 1364 PGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPV- 1422 PGGF ++ + R+ME+SGRI RG FVEGL GAQFA ++DR+R + + PV Sbjct: 1301 PGGFGAVYGVLRAMEESGRIRRGYFVEGLSGAQFAWAGSVDRIRGIRLEDDPQAGGEPVA 1360 Query: 1423 -ALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE 1481 L+A DPAN +G LLPWP P R GA V++ G +LYL GGK ++ ++ Sbjct: 1361 QCLAAMDPANPFGTLLPWPEPAGDTRPRRVPGAWVILVDGLPVLYLGPGGKHLVTLDQEP 1420 Query: 1482 ELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 L AL R R + +V+ +PV ++P +L EAGF +G Sbjct: 1421 HRL-RAACRALHQIPRTGRRRLMIIEQVDGVPVNESPHAGMLLEAGFVRDYRGFS 1474 >UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3F9_JONDD Length = 1618 Score = 1400 bits (3625), Expect = 0.0, Method: Composition-based stats. Identities = 663/1638 (40%), Positives = 911/1638 (55%), Gaps = 146/1638 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T +WF AF +PTA Q W AR HA+V+APTGSGKTLAAFL+A+D++ Sbjct: 4 LFSTPTVEWFTGAFDEPTAAQWGAWDAIARDHHAVVVAPTGSGKTLAAFLWAIDKI---S 60 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + +LY+SP+KAL TDV+RNL+ PL+GI R G T ++VG+RTG Sbjct: 61 ARTQAPSSPLNRCSVLYVSPLKALATDVERNLRAPLRGIEQAIARTGGTPYTMQVGVRTG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTP ER + +PPDILITTPESL+LMLTS+AR L G++TVIIDEVH+VAG+KRGAHL Sbjct: 121 DTPPSERRRFGTHPPDILITTPESLFLMLTSQARSGLSGIDTVIIDEVHSVAGTKRGAHL 180 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-------GGDRPVTVVNPPAMRHPQI 246 ++SLERLDA L A+RIGLSATV V+ +L G RPVTVV PP + I Sbjct: 181 SVSLERLDAFLERPARRIGLSATVEPVDAVSDWLAGGRSISDGGRPVTVVAPPVSKKFDI 240 Query: 247 RIVVPVANMDDVSSV----ASGTGEDSHAGR-EGSIWPYIETGILDEVLRHRSTIVFTNS 301 + VP+ +++D S +G+ + R S+WP++E I+D V +H +T+VFTN+ Sbjct: 241 SVEVPLEDLNDPQQTGEFDVSLSGDAAQEPRARASVWPHVEERIVDLVQQHTTTLVFTNA 300 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R AE+LTAR+NE+ A R + A + A S D IAR+HHGS+S+ Sbjct: 301 RRGAERLTARMNEIAARRSGQDVPDAGSMHA--AAIQAQSGAALDVDHVIARAHHGSMSR 358 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 +R+ TE LK+G L CVVATSSLELGIDMG++DLV+QV P S ASGLQR+GRAGH VG Sbjct: 359 SERSRTESDLKNGVLPCVVATSSLELGIDMGSIDLVVQVGPPPSAASGLQRVGRAGHSVG 418 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 VS+G FP R +LV +A+I + M LE L NPLDVLAQQ VA A+D DE Sbjct: 419 AVSRGRIFPVHRGELVPAAIIAQRMRTRTLEPLHRVANPLDVLAQQIVAMLAVDDWDKDE 478 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 ++ +RR+AP+ L F A LDML+GRYPS DF R ++VW+R T +LT RPGA L Sbjct: 479 LFTTIRRSAPFMGLGHATFVAVLDMLAGRYPSEDFGELRARIVWDRATNLLTGRPGALRL 538 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKA-----------------------GSRRVGELDEEM 578 A TSGGTIPDRG+Y V L + + G +RVGELDEEM Sbjct: 539 AATSGGTIPDRGLYGVFLVDSAAVSDGVVDTSVDDAPGVPRAGKVRLVGGKRVGELDEEM 598 Query: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638 VYESRV D+ TLG+++WRI++IT D+V+V+PAPG RLPFW+G+G GR LG IG + Sbjct: 599 VYESRVGDVFTLGSSTWRIEEITPDRVLVSPAPGVPGRLPFWKGDGLGRSFSLGVAIGQW 658 Query: 639 LHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 L G +E +N++ + EQ ATG++P +V+ER RDE+GDWR Sbjct: 659 LR---RGRHDDDDAVWAGLDERAASNLRSYLREQEEATGVLPTDDTIVVERFRDELGDWR 715 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDA------ 752 +++H+P+G RVH PWA+ I R+ +G D + + SDDGIV R+P D A Sbjct: 716 VVIHTPFGARVHAPWALVIGARLRERYGFDTATMHSDDGIVIRLPAADDPYDVAGAVSDG 775 Query: 753 ----------AIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLW 802 + + + +VRE V S+LFAARFRE A RALL+P P R PLW Sbjct: 776 ASENAGGVGFDDLMVAGDAVESLVREHVADSSLFAARFREAAGRALLLPRARPDRRQPLW 835 Query: 803 QQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTT 862 QQR R++QLL +A +PDFP++LE +RECLQD YD+PAL +M R+ G +++ +VTT Sbjct: 836 QQRQRSAQLLSVAAQFPDFPIVLEAVRECLQDDYDVPALRSVMERVEEGTLRVVEVTTPR 895 Query: 863 PSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL---GQVDPGELLDPQVI 919 SPFA +LLFGY A+F+Y SDAPLAERRA+ L+LD LL LL G D +LLD V+ Sbjct: 896 ASPFAQTLLFGYTAQFIYDSDAPLAERRAAALTLDPTLLAELLGASGSGDLADLLDEGVV 955 Query: 920 RQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTG----------------- 962 + EL + RR + E ++D L+ GP+TVE L R G Sbjct: 956 EKTALELAGVG-DRRLRHAEDVWDFLQRWGPITVEGLGARWVGIDRDDLVQVDPHHLNRS 1014 Query: 963 ----------SSEEVASYLENLLAVKRIFPAMI----SGQERLACMDDAARLRDALGVRL 1008 + + L+ +R+FP + +E +A + DA RLRDALGV + Sbjct: 1015 VDALSCPDPRGVDWARDVVAELVQSRRVFPVRLMTRSGPREYVASIVDAGRLRDALGVAI 1074 Query: 1009 PESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM 1068 P + + + V PL D+ RY + H T + +A F +G A+V + +++L G+V+ Sbjct: 1075 PPGIADEWSAPVRDPLGDMVRRYAKTHVPFTVDDVAERFGVGRAVVFDVVRRLVASGVVV 1134 Query: 1069 NLQ---------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATD 1119 + D + +V R LR RSL A R PV +T A L + + Sbjct: 1135 AGRLLPSTFGGVGDEYCDADVMRVLRRRSLAALRADVEPVVPSTLAVFLPQWHRL----- 1189 Query: 1120 GSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLAT 1179 G GVDG +EQL G +P S E+ ILPARV Y E LDEL+ Sbjct: 1190 -----------GELRGVDGTATALEQLVGAPIPVSTLEADILPARVVGYRPEFLDELMVG 1238 Query: 1180 GAVIWSGQKKL----GEDDGLVALHLQEYAAESFTPAEA----DQANRSALQQAIVAVLA 1231 G V+W G + L G DG+V+ H A + D ++ + + VL Sbjct: 1239 GEVMWVGHRSLSGLRGGRDGIVSFHDPLSAHLTLPAVPPLQNNDDFVVESIHRDVWEVLE 1298 Query: 1232 DGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT-RSSSNAR 1290 + G +FA Q++ ++ + L +ALW LVW G +T+D +APLRAL R + R Sbjct: 1299 NSGGFFAHQLAAQLG------CSFTVLGDALWDLVWAGYVTNDSFAPLRALLGRQRAAPR 1352 Query: 1291 TSTRRSHRARRGRPVYAQPVS--PRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLD 1348 + + S R RR + Q S P L GRWS + + E + A +LD Sbjct: 1353 SRSTASRRPRRLGSRFGQLASVNSDRLSEHPTLVGRWSAVARPFVGREESLAAWTTVLLD 1412 Query: 1349 RYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR- 1407 RYG+I+R + +E+ F + +E +G + RG FVE LGG+QFA L +D LR Sbjct: 1413 RYGVITRSVLGSEDSGFRFTELYRALSHLETTGALRRGYFVEHLGGSQFAAPLAVDALRV 1472 Query: 1408 -DLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLY 1466 D A LS DPA +G+ L WP + PTRRAGA VV+ G+ + Y Sbjct: 1473 ADTARSGGGPLPGETRLLSVWDPAQPYGSTLAWPDSFSVARPTRRAGAHVVIHRGECVCY 1532 Query: 1467 LAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR------QTP-M 1519 + G+ + V+ V L A+ ++++N + V + P + Sbjct: 1533 VDHTGRSV-VFAPLPRPTLDRVCTVLREAVDDGRVSPMKVSKINGMEVLALVRSHEHPDI 1591 Query: 1520 FTLLREAGFSSSPQGLDW 1537 L +AG++ +P GL + Sbjct: 1592 VDALTQAGWTLTPSGLSY 1609 >UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRE7_HALO1 Length = 1523 Score = 1393 bits (3605), Expect = 0.0, Method: Composition-based stats. Identities = 673/1573 (42%), Positives = 899/1573 (57%), Gaps = 109/1573 (6%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF AF PT VQ Q W A ++AL+IAPTGSGKTLAAFL+ +DRL Sbjct: 4 FGPATEAWFSSAFAAPTKVQEQGWARIAAGDNALLIAPTGSGKTLAAFLWCIDRL----S 59 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 RE + R++Y+SP+KAL DV+RNL+ PL GIA R G V +RTGD Sbjct: 60 LPGREERRTPGVRVVYVSPLKALVYDVERNLRAPLAGIARAAEREGIDVRLPSVAVRTGD 119 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 T ++ER R+P +ILITTPESLYL+LTS+ARETLR ET+++DEVHA+A SKRGAHLA Sbjct: 120 TSSKERRTQLRHPAEILITTPESLYLLLTSQARETLRSCETIVVDEVHALAPSKRGAHLA 179 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERL L QRIGLSAT ++VA +LGGDRPV++V+ A + IVVPVA+ Sbjct: 180 LSLERLAHLAARDPQRIGLSATATPLAEVARYLGGDRPVSIVDTAAPPALDLEIVVPVAD 239 Query: 255 MDDVSSV--------------------------ASGTGEDSHAGREGSIWPYIETGILDE 288 M A G S E +WP I +L Sbjct: 240 MTRPEDSLPAAAAGSGRGAFGVDSSLGPGRPLGAEAEGASSDNRPERGMWPAIYPRLLQL 299 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELY---------AARLQRSPSIAVDAAHFESTSGA 339 + HR+TIVF NSRGL E+LT RLNEL + + A+ + + Sbjct: 300 IDEHRTTIVFVNSRGLCERLTHRLNELAEDLAAERAAERARESGAAENGQASRSKGGQTS 359 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 S Q+ I RSHHGS++ +R E+ALKSG +R +VATSSLELGIDMGAVDLV+ Sbjct: 360 GSPAGQAPGTSIVRSHHGSLAHSERTQVEEALKSGAIRAIVATSSLELGIDMGAVDLVVL 419 Query: 400 VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHN 459 V +P SVASGLQRIGRAGH VG SKG FP+ R DL+++AV+ M AG +E+L P N Sbjct: 420 VESPSSVASGLQRIGRAGHGVGETSKGRLFPKHRGDLLEAAVVSSRMMAGAIESLRVPKN 479 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF 519 PLDVLAQQ VA A++ QVD + VRRAA +++LP+ LDM+SGRYPS DF+ Sbjct: 480 PLDVLAQQIVAMVAIEPWQVDALAAVVRRAAGFRELPQDALIGVLDMVSGRYPSHDFADL 539 Query: 520 RPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV 579 P++VW+R++ L+AR GA+ LA+ SGGTIPDRG Y V L E RVGELDEEMV Sbjct: 540 IPRVVWDRQSDELSARRGAKTLALLSGGTIPDRGTYGVYLGE-----DGPRVGELDEEMV 594 Query: 580 YESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL 639 +E TLGAT+WR+++ITRD+V VTPAPG LPFWRG+G GRP ELG +G F+ Sbjct: 595 HEITPGQTFTLGATTWRVERITRDRVQVTPAPGEVGMLPFWRGDGPGRPLELGRAMGAFV 654 Query: 640 HLLA---DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGD 696 LA + + + + + N+ + QR ATG++P R +V+ER RDE+GD Sbjct: 655 RELAALPEEQAHARLVSEFRLDAWAADNLLAHLGGQREATGVLPTDRTIVVERFRDELGD 714 Query: 697 WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL 756 +R+ + SP+G RVH PWA+AI R+ G + + SDDGIV R+ T+ LPDA + L Sbjct: 715 FRVCILSPFGSRVHAPWALAIEARLSQRAGFEVQTLWSDDGIVLRM-QTEDGLPDAELLL 773 Query: 757 FEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQ 816 EPE++ +V E +G SALFA +FRE AARALLMP R PG RTPLW QRL+A +LL +A+ Sbjct: 774 PEPEEVEDLVIEQLGGSALFAGQFRENAARALLMPRRRPGQRTPLWVQRLKAQELLAVAR 833 Query: 817 GYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVA 876 YP FP+++ET R CLQDV+DLPAL L+ + E+++ + T PSPF+ SL+F YVA Sbjct: 834 SYPAFPIVMETYRACLQDVFDLPALSELLGAIRRREVRVELIETDAPSPFSRSLVFAYVA 893 Query: 877 EFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAK 936 ++Y+ DAPLAERRA LSLD +LLR LLGQ D LLD VI ++E ELQ L RR + Sbjct: 894 AYLYEGDAPLAERRAQALSLDRQLLRELLGQEDLRALLDAAVIDELEAELQALDDSRRPR 953 Query: 937 GEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDD 996 + L DLLR LG + ++L R V L L +RI + G+ R M+D Sbjct: 954 HVDALSDLLRRLGELDDDELRARWDAREMPVEDALAELQRARRIARLRVGGRARWVAMED 1013 Query: 997 AARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEE 1056 RDALG P +PE++L V+ P+ L R+ R ++ Q+A ++L A V+ Sbjct: 1014 MGLYRDALGAAPPPGVPEVFLEPVAAPVETLLGRFARTRGPFSSAQVAARYALPPAQVDA 1073 Query: 1057 QLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLE 1110 L L QG ++ D W EV RR++ R+L R PV + R Sbjct: 1074 LLGALAGQGKLLRGAFRPGATGDEWCEPEVLRRIKRRTLAKLRSEVAPVDSAILGRFAPA 1133 Query: 1111 RQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSS 1170 GV G + V+ QL G+ + ES ILPARV D++ Sbjct: 1134 WHGVGEG---------------GRGSRRLGEVLAQLEGLPMSLHELESAILPARVSDFAP 1178 Query: 1171 EMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVL 1230 MLDEL A G+++W G LG DG +AL+ ++ A + L + I+ L Sbjct: 1179 RMLDELGAMGSLVWVGHGALGTRDGKIALYRRDRVAALLP-PPEEPEELGPLHRQILDHL 1237 Query: 1231 ADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNAR 1290 ++ GA F + L EAL L W G++T+D + PLR L R Sbjct: 1238 SERGASFFVALLSACAPA-----STPELLEALGDLAWAGLVTNDTFQPLRLLGR------ 1286 Query: 1291 TSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE---PLNDTERMLALAENML 1347 R RR R +T +GRWSL++ ++TE A +L Sbjct: 1287 --VRAGGSKRRAR------------ESTSAASGRWSLVRELLAGAPSETECAHRRALTLL 1332 Query: 1348 DRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR 1407 +R+GI+SR+ E +PGGF ++ + R+ME+SG++ RG FVEGLGGAQFA +DRLR Sbjct: 1333 ERHGIVSREVAAIEPLPGGFSAIYQVLRAMEESGKVRRGYFVEGLGGAQFAFPGAVDRLR 1392 Query: 1408 DLATQATQTRHYTPVALSANDPANVWGNLLPWPAH--PATLVPTRRAGALVVVSGGKLLL 1465 L P+ L+A DPAN +G +LPWPAH P R AGA VV+ GG+L+L Sbjct: 1393 GLRGDDGGD----PLVLAAADPANPYGWMLPWPAHGDEGAQGPRRVAGARVVLCGGELVL 1448 Query: 1466 YLAQGGKKMLVWQ---EKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTL 1522 +L +G +++L + ++E L+ A+ RR LR + ++ R P Sbjct: 1449 FLDKGCRRLLSFPAAGDRERLIQAGRALAVVAGKRRGKMLR--VESIDGASARTAPQAET 1506 Query: 1523 LREAGFSSSPQGL 1535 L+ AGF + +GL Sbjct: 1507 LQAAGFYADARGL 1519 >UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317F9 Length = 1480 Score = 1389 bits (3594), Expect = 0.0, Method: Composition-based stats. Identities = 670/1548 (43%), Positives = 883/1548 (57%), Gaps = 104/1548 (6%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F+PA RDWF RAF PT Q Q W A EH L+ APTGSGKTLAAFL+ALDRL + Sbjct: 8 DSFTPAVRDWFTRAFDAPTEAQAQAWPAIATGEHTLISAPTGSGKTLAAFLWALDRLAAD 67 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 D + + +R++Y+SP+KAL D++RNL+ PLKGIA E + V IRT Sbjct: 68 PLPD-----RERRTRLVYVSPLKALSYDIERNLRAPLKGIAPEG--------GISVAIRT 114 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP +ER+++ R PPD+LITTPESLYLMLTSRARE L G E VI+DE+HAVAGSKRGAH Sbjct: 115 GDTPQRERAQMLRTPPDVLITTPESLYLMLTSRAREILTGAEWVIVDEIHAVAGSKRGAH 174 Query: 193 LALSLERLDALLHTS-----AQRIGLSATVRSASDVAAFLGGDRP-VTVVNPPAMRHPQI 246 +AL+LERLDAL+ QRIGLSAT +V F+ G R +V+ + + Sbjct: 175 MALTLERLDALVGEHEGRAGVQRIGLSATQNPLEEVGRFMVGPRRRCRIVDTGVRKPLDL 234 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGS---IWPYIETGILDEVLRHRSTIVFTNSRG 303 +I VPV +M + D AG E + IWP I +L V HRSTIVF N+R Sbjct: 235 QIHVPVESMVEPEQGTDVDPLDPVAGGEATRRSIWPAIYPELLRLVQDHRSTIVFVNNRR 294 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 AE+L RLNEL + + I AR+HHGS+++E+ Sbjct: 295 SAERLALRLNELATPEGEPAVEI-------------------------ARAHHGSLAREE 329 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R + E+ LK+GE+ C+VATSSLELGIDMGAVDLV+QV +P SVA+GLQRIGRAGH VG Sbjct: 330 RMVVEERLKAGEIPCIVATSSLELGIDMGAVDLVLQVESPKSVAAGLQRIGRAGHNVGDT 389 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVDEW 482 SKG FP+ R DL++ AV+ + M G +E P NPLDVL+QQ VA AA + L VDE Sbjct: 390 SKGRIFPKFRADLLECAVVAQRMREGAIEPTVVPRNPLDVLSQQIVAMAAAEEELNVDEL 449 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + RV R + +L R+ + LDML GRYPS +F+ RP++VW+R G++ R GA+ LA Sbjct: 450 FVRVTRTHSYAELSRQQLENVLDMLDGRYPSSEFAELRPRIVWDRIAGVIRPRRGARQLA 509 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 VT+ GTIPDRG++ V LP+G RRVGELDEEMVYE+R LGA+SWRI++I R Sbjct: 510 VTNAGTIPDRGLFMVTLPDG------RRVGELDEEMVYEARPGQTFLLGASSWRIEEIGR 563 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 D+VIVTPAPG +PFW+G+ GRP ELGE IG F D + + Sbjct: 564 DRVIVTPAPGAPGAIPFWKGDSVGRPKELGEAIGAFARWAVD-QPAEALVASHDLDPRAA 622 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 N+ + EQ+ AT ++P R +V+ER RDEIGDWR+ + SPYG R+H W +A++ +I Sbjct: 623 RNLLDFLREQQAATRVIPSDRTIVVERFRDEIGDWRLCVLSPYGGRIHAAWGLALSAKIR 682 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 G +A + SDDGI+ +PD D + P A L EP++L V + SSALF ARFRE Sbjct: 683 DQLGLEADAIWSDDGIIVHLPDAD-EPPGAEFALIEPDELEDAVVAELASSALFGARFRE 741 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 A RALL+P PG RTPLWQQRL++ LLE+A+ Y +FP+ILET RECL+DV DLP L Sbjct: 742 NAGRALLIPRAYPGKRTPLWQQRLKSQTLLEVAKRYGEFPIILETYRECLRDVLDLPGLH 801 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 L+ +L E+ I +V T T SPFA+SLLF YVA +MY+ D P AERRA+ LSLD +LLR Sbjct: 802 ELLTQLQRRELSIVEVETATASPFASSLLFDYVATYMYEGDTPNAERRAAALSLDRDLLR 861 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTG 962 LLGQ + +L+D + QVE++LQ + RA + L D+LR +G +T + AQR Sbjct: 862 ELLGQEELRDLIDADALDQVEDDLQHRSERTRASTRDELHDVLRRVGDLTAAEAAQRVVP 921 Query: 963 SSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSY 1022 + A+ L+ L + +R I G++R DA RDALGV P LPE +L V Sbjct: 922 -GVDAAAALDALASERRAVLLRIGGEQRWVDAADAGMYRDALGVVPPGGLPEAFLADVPD 980 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ--------QDI 1074 L L RY + H T E+ F + L+ L G ++ + Sbjct: 981 ALVRLLRRYAQTHGPFTTEEPRLRFGVDPT---PALRALERDGELVQGELRPGGVSGTRE 1037 Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W V RRLR SL R P A L QGV P Sbjct: 1038 WCETNVLRRLRRASLAVLRREIEPADQRALASFLPSWQGV------------DKHPPGGA 1085 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G+D + + L G+ L S WE+++LP RV YS+ +D+L A+G ++W G LG D Sbjct: 1086 GIDRLREQLVPLQGLALTPSTWETEVLPRRVGAYSATWMDQLCASGELVWVGAGALGRRD 1145 Query: 1195 GLVALHLQEYAAESFTPAEAD--QANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGES 1252 G VAL+ ++ A P A A+ + +A+ A LA G +F+ + S Sbjct: 1146 GRVALYFRDDAPLIGPPPGAGRAPAHDTPDHEAVRARLAQGSCFFSDLLVDL-------S 1198 Query: 1253 VDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSP 1312 + A+Q+ALW L W G +T+D +APLRA T R RA + S Sbjct: 1199 LAPEAMQDALWDLAWAGEVTNDAFAPLRA------PRLTLARAQRRAMQRSGRSTGRFSS 1252 Query: 1313 RVSYNTPNLAGRWSLLQV----EPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFP 1368 R + GRWSL P + + R ALAE +L+RYG+++R+ V+AE IPGGF Sbjct: 1253 RRGAGRAEVQGRWSLTAPLFDAAPADPSARRRALAELLLERYGLLTRELVLAEGIPGGFS 1312 Query: 1369 SMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSAND 1428 + + +E G RG FVEGLGGAQFA ++RLR P+ L+A D Sbjct: 1313 GIYSELSQLETLGIARRGYFVEGLGGAQFALPGAVERLRAQRA----PEEAPPLVLAATD 1368 Query: 1429 PANVWGNLLPWPAHPA-TLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE 1487 PA +G LPWP T P R GA VV++G + +LYL +GGK + V + E+ Sbjct: 1369 PAQPFGAALPWPKREGETRRPARTPGANVVIAGSEPVLYLERGGKALQVLVDPEDPRVRP 1428 Query: 1488 VFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 F AL R R L +VN PV T LL + GFS P+ L Sbjct: 1429 AFDALADHTRAGRIRRIALEKVNGEPVMGTRWEELLADVGFSVGPRRL 1476 >UniRef50_D1C082 DEAD/H associated domain protein n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1C082_XYLCX Length = 1632 Score = 1383 bits (3580), Expect = 0.0, Method: Composition-based stats. Identities = 710/1648 (43%), Positives = 931/1648 (56%), Gaps = 149/1648 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D PATRDWF AF+ PTA Q W + +HALV+APTGSGKTLAAFL+A+DRL E Sbjct: 6 DRLGPATRDWFAGAFEGPTAAQDGAWDAIGQCKHALVVAPTGSGKTLAAFLWAIDRLHHE 65 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + + R+LY+SP+KAL DVQRNL+ PL GI R G + VG+RT Sbjct: 66 PVPE-----RARRCRVLYVSPLKALAADVQRNLRSPLTGIRQAAARAGIETPEIAVGMRT 120 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP ER PPD+L+TTPESL+L+LTS+AR L GVETVI+DE+HAVAG+KRGAH Sbjct: 121 GDTPPSERRSFATRPPDVLVTTPESLFLVLTSQARAGLLGVETVILDEIHAVAGTKRGAH 180 Query: 193 LALSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGG-------DRPVTVVNPPAM 241 LALSLERLDALL AQR+GLSATVR VA FLGG R V VV PPA Sbjct: 181 LALSLERLDALLVASGSRPAQRVGLSATVRPVEVVAQFLGGHRTADDGGREVVVVQPPAT 240 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAG--------------REGSIWPYIETGILD 287 + I +VVPV ++ D+ +V G D AG R S+WP++E ++D Sbjct: 241 KRWAIDVVVPVPDLADLDAVGQPGGSDDDAGPGAPDLTGDAASPLRRASVWPHVEERVVD 300 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSS 347 V HRST+VFTNSR AE+LT+R+NEL++ RL + + + + +S Sbjct: 301 LVAGHRSTLVFTNSRRGAERLTSRMNELWSQRLGEAVDDQGATWPAAAPGQSGTAVGRSP 360 Query: 348 DV-FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 D +AR+HHGS+S+ +R TE LK G L VVATSSLELGIDMGAVDLV+QV P SV Sbjct: 361 DAEVLARAHHGSMSRAERTRTESELKEGRLPAVVATSSLELGIDMGAVDLVVQVGAPPSV 420 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 ASGLQRIGRAGHQVG VS G+ FP R DLV +AV+ + M AG +E L P NPLDVLAQ Sbjct: 421 ASGLQRIGRAGHQVGAVSHGVVFPTHRGDLVPAAVVAQRMRAGEIEPLHVPANPLDVLAQ 480 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 Q VAA A D E + RRA P+ L ++A LDML+GRYPS DF+ R ++VW+ Sbjct: 481 QVVAALATDDWDAAELLATFRRAHPYAHLGDATWNAVLDMLAGRYPSEDFAELRARIVWD 540 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA--GSRRVGELDEEMVYESRV 584 R T L+ RPGA LA TSGGTIPDRG+Y V L EE A G +RVGELDEEMVYESRV Sbjct: 541 RATDRLSGRPGALRLAATSGGTIPDRGLYGVYLAGSEEGAQRGGKRVGELDEEMVYESRV 600 Query: 585 NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD 644 D TLG+++WRI+ IT D+V+V+PAPG RLPFW+G+ GRP ELG +G F+ + Sbjct: 601 GDTFTLGSSTWRIEDITPDRVLVSPAPGLPGRLPFWKGDAQGRPVELGRAMGAFVRTIDT 660 Query: 645 GAFF--------SGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGD 696 + + N+ + EQR ATG +P R +V+ER RDE+GD Sbjct: 661 ELAAGPDGADAGRARLREAGLDAWAADNLAAYLTEQRTATGRLPDDRTIVVERFRDELGD 720 Query: 697 WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD------------ 744 WR+++HSP+G RVH PW++ +AGR+ A +G D +V+ SDDGIV R+PD Sbjct: 721 WRVVVHSPFGARVHAPWSLVLAGRLRARYGLDVAVMHSDDGIVLRLPDSGAGWDDLGAAP 780 Query: 745 -----------TDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 +D + A L +P+ ++ VR+ +GSS LFAARFRE +ARALL+P R Sbjct: 781 TWADGGPGGAGSDAPIVTAEDLLVDPDDVVGAVRDELGSSVLFAARFREASARALLLPRR 840 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEI 853 P R PLWQQR RA+QLL++A +PDFP+ LE RECLQD +D+ AL LM L G + Sbjct: 841 RPDRRQPLWQQRQRAAQLLQVAAQFPDFPMTLEAARECLQDDFDVAALAALMGDLGAGRV 900 Query: 854 QISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ---VDP 910 +I +V T TPSPFA SLLFGY A+F+Y DAPLAERRA+ LSLD +LL LLG Sbjct: 901 RIVEVATQTPSPFAQSLLFGYTAQFLYDGDAPLAERRAAALSLDPDLLAELLGDQGATAI 960 Query: 911 GELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE-EVAS 969 +LLDP + + E ELQ LAP R+AK EGL+D+LR GP + L R + +V Sbjct: 961 ADLLDPAAVERTESELQALAPDRQAKDAEGLWDVLRRTGPHPLAALEARTREEARGQVPD 1020 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFL 1029 +L L +R+ +G E+ A ++DA RLRDALGV LP +PE V L DL Sbjct: 1021 WLAELERARRLIRVRFAGAEQWAVVEDAGRLRDALGVALPVGVPETLTELVPDALGDLVR 1080 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM---------NLQQDIWVSDEV 1080 R++R H V A +A + LG+A+V L +L+ G V+ D W EV Sbjct: 1081 RHVRTHGPVAAADVAARYGLGVAVVLHALARLQAAGTVVRGALRPSSLGGTGDEWCDPEV 1140 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 R LR RSL A R PV L Q V SP GVDGV+ Sbjct: 1141 LRTLRRRSLAALRAEVEPVEPQALGVFLPRWQQVG-------------SPAAPRGVDGVL 1187 Query: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL---GEDDGLV 1197 R +EQLAG +PAS E+ +LPARV YS +LDEL G V+W G +L G DG+V Sbjct: 1188 RAVEQLAGAAVPASALETLVLPARVPGYSPALLDELTTAGEVLWCGHARLPGSGGGDGMV 1247 Query: 1198 ALHLQEYAAESFTPAEADQAN---RSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVD 1254 +LHL + AA + P + + + L +A++ +L G +F ++++ +VD Sbjct: 1248 SLHLADGAALTLRPPDPVEPGGPLDTPLHRAVLDLLTGSGGFFLPRLAELAGTSASATVD 1307 Query: 1255 LSALQEALWALVWQGVITSDIWAPLRALTRSSSNAR----------TSTRRSHRARRGRP 1304 + LW LVW G +T+D PLR + + R+ GRP Sbjct: 1308 V------LWDLVWAGRVTNDGLGPLREAVGTGAGGAHRAPRAPARARPVSRTRFGGLGRP 1361 Query: 1305 VYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIP 1364 + + GRWS L + T R AL + +L+R+G+++R +E Sbjct: 1362 A-SSGSPVSAAAVVRTGGGRWSALPDVERDPTIRAHALTQVLLERHGVLTRAVAPSEGAA 1420 Query: 1365 GGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL------------------ 1406 G F + + R +E+ G + RG FVEGLGG+QFA +D+L Sbjct: 1421 GAFRDVYRVLRELEERGAVRRGYFVEGLGGSQFALPGAVDQLRTDAADRSRAHESDDDVA 1480 Query: 1407 -------RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPAT---LVPTRRAGALV 1456 R TR + L+A DPAN +G L WP P R+AGA+V Sbjct: 1481 RPASAPGRGSTRPGGDTRPPEALLLAATDPANPYGAALAWPRTGGASSVHRPGRKAGAVV 1540 Query: 1457 VVSGGKLLLYLAQGGKKMLVWQEKEELLAPE---VFHALTTALRREPRLRFTLTEVNDLP 1513 V+ G L+LY+ +GG+ +L + A L A R + V+ +P Sbjct: 1541 VLVDGDLVLYVERGGRTVLSFAPPGPGGARRTGAAARELAAAASSGRLGRVLIQRVDGVP 1600 Query: 1514 VR-----QTPMFTLLREAGFSSSPQGLD 1536 +TP L +AGF+ +P+GL Sbjct: 1601 ALTAARDRTPAAAALLDAGFAVTPRGLR 1628 >UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023K9_SOLUE Length = 1521 Score = 1380 bits (3572), Expect = 0.0, Method: Composition-based stats. Identities = 646/1573 (41%), Positives = 886/1573 (56%), Gaps = 124/1573 (7%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+F TR WF F PT Q W AR + L++APTG+GKTLAAF + +DRL Sbjct: 17 DLFHAPTRAWFEAVFTAPTRPQALGWPAIARGDSTLILAPTGTGKTLAAFQWCIDRLM-- 74 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 K + R++YISPIKAL DV+RNL+ PL GIA R G + IRT Sbjct: 75 ---FAPVPAKNQRCRVVYISPIKALAVDVERNLRAPLAGIAMAARAAGIAFHEPTIAIRT 131 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTPA ER++ R P DILITTPES+YL+LTS ARE LR VETV++DE+HA+ +KRG+H Sbjct: 132 GDTPAAERARFARRPADILITTPESIYLLLTSNAREMLRSVETVVLDEIHALVPTKRGSH 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---------------------- 230 LALSLERL+AL QRIGLSAT R +VA FLGG Sbjct: 192 LALSLERLEALCGRKLQRIGLSATQRPLDEVARFLGGAVTASAGKKERAGDATQEILAEF 251 Query: 231 ---------RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYI 281 R VT+V+ A + +R+ VP+ +M + + +G S SIW I Sbjct: 252 ESASATPKYREVTIVDASAPKRIDLRVEVPIDDMTRLDELVVPSGPASAPPVRPSIWSAI 311 Query: 282 ETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS 341 +L+ V H ST++FTNSR LAE+++ +NEL L Sbjct: 312 HPKLLELVRAHTSTLIFTNSRRLAERISGAVNELAGETL--------------------- 350 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 R+HHGSV+ +QR E LK G LR +VATSSLELGIDMGA+DLV+Q+ Sbjct: 351 ----------VRAHHGSVAADQRKEIEDRLKMGTLRGLVATSSLELGIDMGAIDLVVQIE 400 Query: 402 TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 P SVASG+QR+GRA H+VGGVS + FP+ R DL+ A I M+ G++E++ P NPL Sbjct: 401 APPSVASGMQRVGRASHRVGGVSAAVMFPKYRGDLLGCAAITRAMYQGKVESVHYPRNPL 460 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 DVLAQQ VA AMDA E Y+ VRRAAP+ L R VFD+ LDMLSGRYPS +F+ RP Sbjct: 461 DVLAQQIVAMVAMDAWDAGELYALVRRAAPYAALTRPVFDSVLDMLSGRYPSDEFAELRP 520 Query: 522 KLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE 581 +L W+R +G LT+R GAQ +AV +GGTIPDRG++ V L RVGELDEEMV+E Sbjct: 521 RLTWDRVSGQLTSRQGAQKVAVVNGGTIPDRGLFGVFLMGA---TKGARVGELDEEMVFE 577 Query: 582 SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL 641 SR D I LGAT+WRI++IT D+V V+PAPG ++PFW G+ GRPAE G IG+ Sbjct: 578 SRTGDTIILGATTWRIEEITHDRVTVSPAPGEPGKMPFWHGDAAGRPAEFGREIGEMTRE 637 Query: 642 LAD---GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 L D A F+ I + + N+ +EEQ+ ATG VP R +V+ERCRDE+GDWR Sbjct: 638 LLDMPRAAAFARLIDEHSLDASAAENLMRYLEEQKIATGRVPSDRDIVIERCRDELGDWR 697 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE 758 + + +P+G RVH PW +A ++ + G +A + +DDG V R+P+++ L + L Sbjct: 698 VCVLTPFGTRVHAPWCMAATAKLRSERGIEAESMWTDDGFVLRMPESEEPL-ETEWLLPS 756 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 P +L +V +GS++LFAA+FRE AARALL+P R G R PLWQQR RA+ LL +A Y Sbjct: 757 PGELKDLVLRQLGSTSLFAAKFREAAARALLLPRRRAGIRAPLWQQRKRAADLLAVATRY 816 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 FP++LET REC+++V+DL A +++ + G I+++ V +T PSPFA +LLF Y+A + Sbjct: 817 SSFPMLLETYRECVREVFDLEAATAILKEVQRGTIRVTAVESTKPSPFAGTLLFSYIANY 876 Query: 879 MYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE 938 +Y DAPLAERRA LS+D L +LG D ELLD + +VE++LQ L P +A+ Sbjct: 877 IYDGDAPLAERRAQALSIDQSQLEEILGSTDFRELLDRAAMEEVEQQLQALDPDYQARHT 936 Query: 939 EGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAA 998 + L DLL +LG ++ E++A R TG S LE+L+A +R I+G+ R ++ AA Sbjct: 937 DALHDLLLKLGDLSKEEIAARSTGGS------LEDLVAARRAVRVRIAGETRYIPVEYAA 990 Query: 999 RLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL 1058 R RDA+G LP L +++L +PL +L RY R H T ++A + L A V+ L Sbjct: 991 RYRDAVGTPLPPGLADVFLESSEHPLLELLRRYARTHGPFTTAEVAARYGLVAAQVDASL 1050 Query: 1059 QQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQ 1112 ++ G ++ + W +V +++R ++L R P T+AR+L Q Sbjct: 1051 RRQHLDGKLLEGEFRPEGVHREWCDPDVLQQIRRKTLARLRREVVPAEQHTFARMLTRWQ 1110 Query: 1113 GVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEM 1172 G G D ++ IE L G LP S E +ILPARV DY Sbjct: 1111 GAAVP---------------RRGQDALLDTIEILQGAALPVSELEREILPARVSDYRPAD 1155 Query: 1173 LDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLAD 1232 LD L+A+G V+W G++ +G+ DG VAL+L E + P+ + + AL IV +L Sbjct: 1156 LDALMASGDVVWVGREPVGDRDGRVALYLAEALHKLLLPSPPPELSGRAL--VIVELLRQ 1213 Query: 1233 GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS 1292 GA F + Q QEALW LVW G+IT+D + PLR L + + R Sbjct: 1214 MGANFFAALHQAAGGGFPNDT-----QEALWELVWAGIITNDTFHPLRNLLHAKDDER-G 1267 Query: 1293 TRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE---PLNDTERMLALAENMLDR 1349 R G P + + R GRWSL+ + TE A+ +L R Sbjct: 1268 RREVREGPPGSPEFLRRFRARTG-GAQGGEGRWSLVAQRLGAGVTQTEWSANQAQQLLVR 1326 Query: 1350 YGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL 1409 +GI+ R+ ENI GG+P++ ++ME++G + RG FV GLG AQFA +D LR L Sbjct: 1327 HGIVMRETASVENIVGGYPAIYPALKTMEENGWVRRGMFVAGLGAAQFAMTAAVDMLRSL 1386 Query: 1410 ATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQ 1469 + + L+A+DPAN +GNLL WP ++ R +GA VV+ G+L +L + Sbjct: 1387 RAEP---EKPEALHLAASDPANPYGNLLAWPGANHSM--ARASGASVVLVNGQLAAFLRR 1441 Query: 1470 GGKKMLVWQEKEELLAPEVFHALTTAL------RREPRLRFTLTEVNDLPVRQTPMFTLL 1523 + V +EE V L L R+ R + E+ND P ++ + L Sbjct: 1442 RNPSIRVMLPEEEPERSRVARELAKKLAEVAIRRQGRRSGLLIGEINDAPAQEHFLARFL 1501 Query: 1524 REAGFSSSPQGLD 1536 AGF SS G Sbjct: 1502 EGAGFVSSAPGFQ 1514 >UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJH4_EGGLE Length = 1741 Score = 1379 bits (3569), Expect = 0.0, Method: Composition-based stats. Identities = 781/1712 (45%), Positives = 994/1712 (58%), Gaps = 190/1712 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A P P +L FS R WFL AF +PT +Q + W V E+ALVIAPTGSGKTLAA Sbjct: 37 AREPTPHALT--RFSDEVRGWFLDAFPEPTPLQERAWDVIEGGENALVIAPTGSGKTLAA 94 Query: 62 FLYALDRLFREGGEDT---REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 FL+A+D L RE ++ K R+LYISP+KALG DV+RNLQ PL GIA Sbjct: 95 FLFAIDELMREKAATAGLPKKERPGKGVRVLYISPLKALGADVERNLQAPLAGIAARMAA 154 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVII 178 G +R G+RTGDT +R L RNPPDILITTPESLYLMLTS+ARETLR VETVI+ Sbjct: 155 AGGAMPEVRTGMRTGDTTPDQRRSLQRNPPDILITTPESLYLMLTSQARETLRTVETVIV 214 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 DEVHA+AGSKRGAHLALSLERLD LL AQRIGLSATVR ++A FLGG PV VV Sbjct: 215 DEVHALAGSKRGAHLALSLERLDDLLEKPAQRIGLSATVRPRDEIARFLGGPHPVRVVAS 274 Query: 239 PAMRHPQIRIVVPVANMDDV---------------------------------------- 258 +R+ VPV +M V Sbjct: 275 EGRPDMDVRVRVPVRDMTAVPTFGGSDLTGGGAGKRGGGPRLAPAEEAWKSDRALRAAMA 334 Query: 259 -SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 SS+ + T SIWPYIE ILDEVL HR+TIVF NSRGL EKLTARLN+LYA Sbjct: 335 KSSLPASTTSPDSRLGSSSIWPYIEASILDEVLAHRTTIVFVNSRGLCEKLTARLNDLYA 394 Query: 318 ARLQ--RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 R+ R + AA S G+T++ + IA++HHGSVSKE+R E+ LK+GE Sbjct: 395 KRMGIARGVDMDAAAAPIRSDLGSTADMSTGAPAVIAKAHHGSVSKEKRLQVERELKAGE 454 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 L CVVATSSLELGIDMG++DLV+QVA P SVAS LQRIGRA HQVGG S G FPRTR + Sbjct: 455 LPCVVATSSLELGIDMGSIDLVLQVAAPPSVASALQRIGRANHQVGGRSTGSIFPRTRTE 514 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 ++D+AV E M+ GR+E N LDVLAQQTVAA AMD L D+W+ VRRAAP+ +L Sbjct: 515 IIDAAVAAEGMYEGRIEQTAFVKNALDVLAQQTVAAVAMDELAADDWFDTVRRAAPYSEL 574 Query: 496 PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMY 555 PRR FD+ L ML+GRY + D + F P++VW+RE G L ARPG Q AV S GTIPDRGM+ Sbjct: 575 PRRAFDSVLGMLAGRYATADLAEFSPRIVWDRERGRLLARPGTQRQAVMSAGTIPDRGMF 634 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 SV+LPEG+ G RRVGELDEEMVYESRV DIITLG +SWRI +ITRD+VIV PAPGRSA Sbjct: 635 SVVLPEGDGAQGRRRVGELDEEMVYESRVGDIITLGTSSWRISEITRDRVIVEPAPGRSA 694 Query: 616 RLPFWRGEGNGRPAELGEMIGDFLHLLADGA----------------FFSGTIPPWLAEE 659 RLPFW GEG GRPAE G M G FL +A G S + ++ Sbjct: 695 RLPFWHGEGVGRPAETGRMRGAFLRAVAAGIEGDDAEAEEGGFGVSCAVSERLAADGLDD 754 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + N+ LI QR ATGI+P + LV+ERC DE GDWR++LHSPYGRRVHEPWA+A++ Sbjct: 755 DAQRNLVELIRSQRAATGIIPDDKTLVVERCEDEQGDWRVLLHSPYGRRVHEPWAMAVSD 814 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 RI A++G DA +A+DDGIV RIP T+ +LP +F F+P++L +I R+ VGS++LF+AR Sbjct: 815 RIMAIYGYDAQAMAADDGIVLRIPMTETRLPGIELFAFDPDELDRIARDRVGSTSLFSAR 874 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRECAARALLM PG R PLWQQRL+A QLLE A+ +FP+++ET RECLQDVYD+ Sbjct: 875 FRECAARALLMSPIAPGKRAPLWQQRLKAGQLLEAARREREFPILVETARECLQDVYDMR 934 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 AL LM ++ G +++ + T+ PSPFA LLFGYV E +Y D P AE+RAS+LSLD Sbjct: 935 ALHELMEQVQAGSVRLVEAQTSVPSPFAAPLLFGYVGEHLYAGDLPHAEQRASLLSLDPT 994 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 LL LLG D G++LD VI VE LQRLAP RR +G EG DLLR LGP++VE+ A R Sbjct: 995 LLGELLGSTDLGDVLDADVIAGVEAGLQRLAPDRRMRGIEGAADLLRVLGPLSVEEAALR 1054 Query: 960 HTG------------------SSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLR 1001 + EE + LE L R F ++ G+E A +DDAA LR Sbjct: 1055 MRSDAEADDDGAADEGGGEAATEEEAHALLEELQRAHRAFTVVLGGKELWAAVDDAAFLR 1114 Query: 1002 DALGVRLPE------------SLPEIYL------------------------HRVSYPLR 1025 DALG +P + L +PL Sbjct: 1115 DALGATIPPWADALNRPASQSGQAQAPLRDPERSAQREIEGSRAASAESDGGEDALHPLD 1174 Query: 1026 DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDI--------WVS 1077 +L RY R H +AE A F +G+A+ + L +L G +M + WV Sbjct: 1175 ELLARYARTHGPFSAEAAAARFGIGVAVARDGLARLTSAGRLMQGRFGEDGDGRACAWVE 1234 Query: 1078 DEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVD 1137 VFRRLR SL AR A + V+ + +AR L++ QG P + +EG+D Sbjct: 1235 TGVFRRLRSLSLAEARRAVQAVSPSAFARFLIDLQGAGPLGEE-----------RFEGID 1283 Query: 1138 GVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD--- 1194 G+ +VI Q GV LPAS WE+ + P+RVRDY MLDELLA+G V+W+G ++ G++ Sbjct: 1284 GLAQVIAQFEGVFLPASAWEAHVFPSRVRDYRPGMLDELLASGDVVWAGARREGDEGDGR 1343 Query: 1195 ---------------GLVALHLQEYAAESFTPAEADQANRSA---------LQQAIVAVL 1230 GLVA + + P AD + ++ +V L Sbjct: 1344 ERALRPGSSREREAAGLVAFYPTDSPFAPVRPDLADAPSDGPKLEGSAAPSVEATVVEAL 1403 Query: 1231 ADGGAWFAQQISQRIRDKI-GESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 GG F +QI +R ++ E VD + + + L+W G T+D +AP+RA + A Sbjct: 1404 GFGGGLFFRQIVDAVRRRLAPEFVDEAVVASTMRELMWDGRATNDTYAPVRASLEGAGAA 1463 Query: 1290 RTSTRRSHRARRGRPVYA---------QPVSPRVSYNTPNLAGRWSLLQVEPLNDTERML 1340 R + R R A + ++ + L GRWSL+ P NDT R + Sbjct: 1464 AGKPRSAPRRRVSSRRSAMRTVDSPTMRGIASAQAAVGAALTGRWSLIMPSPENDTVRAI 1523 Query: 1341 ALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAER 1400 AL E++LDRYG++SR V +PGG ++ + R MED G ++RG FV+GLG AQFA R Sbjct: 1524 ALVESILDRYGVLSRDVVQLSGVPGGLGALLPVLRQMEDVGDVLRGAFVQGLGPAQFAAR 1583 Query: 1401 LTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP---------AHPATLVPTRR 1451 TID LR + PV L+A+DPA ++G LPWP A PTRR Sbjct: 1584 ETIDVLRTYEAGDGEADPREPVVLAADDPACLYGAGLPWPPVARADAEGAEEHEARPTRR 1643 Query: 1452 AGALVVVSGGKLLLYLAQGGKKMLVWQEKEE-------LLAPEVFHALTTALRREPRLRF 1504 AG+LVVV GG LY A G + +L + + + L +L A R + Sbjct: 1644 AGSLVVVLGGVPALYAAAGLRSLLSFTDDGDALARAARALVAHEKRSLRRAGAEGARKKV 1703 Query: 1505 TLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 + +N + +P+ +L++AG P G+ Sbjct: 1704 VVETLNGRSILDSPLAEVLQDAGLVRLPDGMR 1735 >UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7I8_ACIC5 Length = 1565 Score = 1377 bits (3564), Expect = 0.0, Method: Composition-based stats. Identities = 652/1601 (40%), Positives = 883/1601 (55%), Gaps = 153/1601 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P T +WF F PTA Q W AR E L+ APTG+GKTL AFL+ LDRL Sbjct: 23 LFHPVTAEWFRAVFDHPTAPQRMGWPAIARGESTLIFAPTGTGKTLTAFLWCLDRLMLHA 82 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + RILYISP+K+L DV+RNLQ PL GIA RR + IRTG Sbjct: 83 PP------MEEGCRILYISPLKSLAVDVERNLQSPLAGIAATAARRNVPVHMPEIAIRTG 136 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT +ERS+ R+P +ILITTPESLYL+LTS A +LR VETVI+DE+HA+ +KRGAHL Sbjct: 137 DTAQRERSRFRRHPAEILITTPESLYLLLTSEAAASLRTVETVILDEIHALVPTKRGAHL 196 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD----------------------- 230 ALSLERL+A+ QRIGLSAT R +VA FL G Sbjct: 197 ALSLERLEAITQKPLQRIGLSATQRPLEEVAHFLAGAESQPSTAADETAPAHEWTTNDER 256 Query: 231 ----RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS-GTGEDSHAGREGSIWPYIETGI 285 RPVT+V + +R+ VPV +M + +G S + SIW I + Sbjct: 257 PHLFRPVTIVQANEPKQLNLRVEVPVEDMARLGQPEELPSGAASQGPKRTSIWSAIHPRL 316 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ 345 ++ + +ST++F NSR LAE+L A LNE+ L Sbjct: 317 VEIIRERQSTLLFVNSRRLAERLAAALNEIAGEPL------------------------- 351 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS 405 AR+HHGS++ QRA E ALK+G LR +VATSSLELGIDMGA+DLVIQ+ P S Sbjct: 352 ------ARAHHGSLAAAQRAEIEDALKAGRLRALVATSSLELGIDMGAIDLVIQIEAPPS 405 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLA 465 VASG+QRIGRAGH VG S G+ FP+ R DL+ A + M +E+ NPLDVLA Sbjct: 406 VASGMQRIGRAGHSVGLPSDGIIFPKYRADLIACAAVTRAMHERLVESTRYLRNPLDVLA 465 Query: 466 QQTVAAAAMDA----------------LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG 509 QQ VA A + V++ ++ +RRAAP+ L R F+ LD+L+G Sbjct: 466 QQIVATVAHPPAAARPRAKGQPPFEPHIAVEDIFTLLRRAAPFASLSRTAFEGVLDLLAG 525 Query: 510 RYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR 569 RYPS +FS RP++ W+R + ILT R GA+ LA+ +GGTIPDRG+Y V L + Sbjct: 526 RYPSDEFSELRPRITWDRVSNILTPREGAKSLAILNGGTIPDRGLYGVFLARSD---KPV 582 Query: 570 RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPA 629 RVGELDEEMV+ESR D LGA++WRI++I D+V+V+PAPG ++PFW G+ GRP Sbjct: 583 RVGELDEEMVFESRTGDTFLLGASTWRIEEILPDRVLVSPAPGEPGKMPFWHGDAAGRPL 642 Query: 630 ELGEMIGDFLHLLA---DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLV 686 E G IG + L A S + + N+ + +Q AT VP R+LV Sbjct: 643 EFGRRIGALIRELRALPRNAAISRLVREHDLDTLAAENLLRFLADQEIATVTVPDDRNLV 702 Query: 687 LERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTD 746 +ER RDE+GDWR+ + +P+G VH PWA+A+AGRI A G D + DDG V R PDTD Sbjct: 703 IERTRDELGDWRVCVLTPFGSSVHAPWAMAVAGRIRAAGGPDVETMWGDDGFVLRFPDTD 762 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 PDA + L EP + +V +GS+ALFAA+FRE AARALL+P R R PLWQQR Sbjct: 763 TP-PDADLLLLEPAEAADLVLRQLGSTALFAAKFRESAARALLLPRRRAQGRAPLWQQRK 821 Query: 807 RASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPF 866 RA LL +A YP FP++LE REC++DV+D+P+ +R + ++++ V T TPSPF Sbjct: 822 RAYDLLSVASKYPAFPMLLEAYRECMRDVFDMPSFLETLRAIQKRDVRVHVVDTRTPSPF 881 Query: 867 ATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEEL 926 A+SLLF YVA ++Y DAPLAERRA LS+D + LR LLG D ELLD I+QVEE+L Sbjct: 882 ASSLLFSYVANYIYDGDAPLAERRAQALSIDQDQLRELLGDSDLRELLDADAIQQVEEQL 941 Query: 927 QRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMIS 986 Q L G RA+ +G+ DLL LG ++ E+LA+R ++ ++ + L+ LL +RI I+ Sbjct: 942 QCLEEGHRARSADGIHDLLLRLGDLSREELARRL--ATPDLLAVLDRLLKARRILEVKIA 999 Query: 987 GQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHE 1046 + RL ++DAAR RDALG+ LP + + L V P+ +L R+ R H T + A Sbjct: 1000 SERRLIAVEDAARYRDALGIPLPPGIAKALLATVEKPVLELIRRFARTHGPFTLAEAAQR 1059 Query: 1047 FSLGIAIVEEQLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVA 1100 F L VE L+ L +G V+ W EV R +R ++L R+ PV Sbjct: 1060 FGLDARAVESVLRTLALEGRVLEGGFRPGGLHREWCDAEVLRLIRRKALSRLRKEIEPVE 1119 Query: 1101 ATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQI 1160 ARL QG+L G+D ++ IE L G +PASL ES I Sbjct: 1120 QQMLARLETHWQGILQ---------------RRRGLDALLDTIESLQGAPIPASLLESSI 1164 Query: 1161 LPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRS 1220 LPAR+ Y+ LD L+A G V W G LGE DG +AL+L + + S Sbjct: 1165 LPARLARYAPADLDTLIAAGEVTWCGLDSLGEHDGRIALYLADRMPQLLPTRAVTIDAAS 1224 Query: 1221 A---LQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWA 1277 +Q I+ LA GGA F Q+ + + +ALW LVW+G++T+D Sbjct: 1225 PTAAREQLILDQLASGGAIFFAQLHEAVGGGFPGETL-----DALWNLVWRGLVTNDALH 1279 Query: 1278 PLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP----L 1333 LRA SS +R++ R+ + P P GRWSL+ + Sbjct: 1280 ALRAYVTKSSTSRSAKRQ----------HNVPSFRSRRTVPPTAQGRWSLVPMAERTTSA 1329 Query: 1334 NDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLG 1393 TE A+A +L RYG+++R++V EN+PGGF ++ + +++E+SGRI RG FV GLG Sbjct: 1330 QQTEWSHAIAHQLLHRYGVLTRESVAQENLPGGFSAIYDVLKALEESGRIRRGYFVAGLG 1389 Query: 1394 GAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP-----AHPATLVP 1448 AQFA +D LR L A + V+++A DPAN++G++L WP + P Sbjct: 1390 AAQFALPAAVDLLRSLRN-APEPESAEIVSIAATDPANLYGSVLRWPQPAPEEQGSDSSP 1448 Query: 1449 ---TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALT--------TALR 1497 TR GA V++ G+L+ YL + + V+ +E V L LR Sbjct: 1449 RTLTRTLGASVILRNGELIAYLRRSNPNVQVFLPAQEPDRTHVARDLAQFLASQVQQQLR 1508 Query: 1498 REPRLR---FTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 E R ++ +N +PV+Q P+ L +AGFS +P G Sbjct: 1509 DEEARRHGGLLISTINGVPVQQHPLARFLSDAGFSPAPLGF 1549 >UniRef50_C4DG18 ATP dependent helicase, Lhr family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DG18_9ACTO Length = 1534 Score = 1377 bits (3563), Expect = 0.0, Method: Composition-based stats. Identities = 659/1599 (41%), Positives = 870/1599 (54%), Gaps = 146/1599 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 FS TR WF F PT Q W AR ++ALV+APTGSGKTL+AFL++LDRL Sbjct: 8 AFSRPTRAWFAERFGAPTPAQAGAWEAIARGDNALVVAPTGSGKTLSAFLWSLDRL---- 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + ++ R+LY+SP+KAL DV+RNL+ PL GI +E +R G ++ V +RTG Sbjct: 64 ATTPKPEDPKRRCRVLYVSPLKALAYDVERNLRQPLAGIGEEAKRLGVEAPDVSVSMRTG 123 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTPA +R R P DILITTPESL+L+LTS AR+ LRG++TVIIDEVHAV G+KRGAHL Sbjct: 124 DTPADQRRAFARTPSDILITTPESLFLLLTSAARDALRGIDTVIIDEVHAVCGTKRGAHL 183 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 AL LERLDALL AQRIGLSATVR + A ++GG RPVT+V PPA + ++ + V V Sbjct: 184 ALCLERLDALLPQPAQRIGLSATVRPIEETARYVGGPRPVTIVKPPAAKTIELSVDVTVP 243 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 ++ D++ V + SIWP I + D + +RSTIVF NSR LAE+L +RLN Sbjct: 244 DLADLTDVDEQ--------GQPSIWPSIVKRLHDLIEANRSTIVFVNSRSLAERLCSRLN 295 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E+ + A S+ +AR+HHGS+S+E+R E LKS Sbjct: 296 EVVVKH-------DTPYRSQPAYIMAQSSAAAGVMPVLARAHHGSMSREERLQVETGLKS 348 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GELR VV+TSSLELGIDMGAVDLV+ + +P SVASG+QR+GRAGHQVG VS+G+ P R Sbjct: 349 GELRAVVSTSSLELGIDMGAVDLVVLIGSPPSVASGVQRVGRAGHQVGAVSQGVVLPTHR 408 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 DL+ + V E M G +E L PP NP+D+L+Q V+ AMD +VD+ VR AAP+ Sbjct: 409 SDLLAATVAAERMLDGGIEELRPPSNPIDILSQHLVSMVAMDDWRVDDLARVVRGAAPFA 468 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 L + LDM+SG+YPS FS +PKLVWNR TG LTARPGAQ LAV + GTIPDRG Sbjct: 469 SLSDEALRSVLDMVSGKYPSTGFSGLKPKLVWNRATGRLTARPGAQRLAVLNAGTIPDRG 528 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 +Y V L EG RVGELDEEM+YESRV D+ LGATSWRI+ IT D+V+V+PAPG+ Sbjct: 529 LYGVYLAEG---GTGSRVGELDEEMIYESRVGDVFLLGATSWRIESITPDRVLVSPAPGQ 585 Query: 614 SARLPFWRGEGNGRPAE----LGEMIGDF------------------------------- 638 +AR+PFW+GE GRPAE +G + + Sbjct: 586 AARMPFWKGEDVGRPAEFGRAIGVRLRELTNESEANAGGKRHAADGEPGAANAGATATAS 645 Query: 639 --------------LHLLADGAFFSGTIPPWLAE--------ENTIANIQGLIEEQRNAT 676 ADG + ++ +N+ +++QR T Sbjct: 646 DGASADESEESPAGKRNAADGTSGGASSRRHGLPGSAGSVLADSAASNLAAYVDQQREHT 705 Query: 677 GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDD 736 G VP R +V+ER RDE+GDWR+I+H G RV+ PWA+AIA R+ G DA + +DD Sbjct: 706 GAVPDDRTVVVERFRDELGDWRVIVHCLLGARVNRPWALAIAARLRERLGVDAHAMGTDD 765 Query: 737 GIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPG 796 GIV RIPD P A + FEPE + +IV E + +S LF+ARFRECAARALL+P + G Sbjct: 766 GIVLRIPDM-TDPPGAELLAFEPEAITRIVTEQLTASPLFSARFRECAARALLLPRKAIG 824 Query: 797 HRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 R PLWQQR RA+QL E+A+ + DFP+ E RECL++ +D+ AL LMR L Sbjct: 825 RRQPLWQQRQRAAQLFEVAREFTDFPITAEAARECLEEYFDMDALTGLMRSLAERSTAAV 884 Query: 857 DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDP 916 DV T + SPFA S+L +VA +Y D PLAERRA+ +S LL LLG+ D +LLDP Sbjct: 885 DVVTESASPFALSILSSFVAGNLYGEDEPLAERRAAA--FNSGLLDELLGEGD--QLLDP 940 Query: 917 QVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLA 976 V+ + E LQ GR G E + +LLR +G + DLA+R + Sbjct: 941 AVVAEAEAWLQW-RDGRDLSGAEDVAELLRVVGDQSDGDLAERGIAVAAAEELEAAGRAV 999 Query: 977 VKRIFPAMISGQERLACMDDAARLRDALGVRLPE---------SLPEIYLHRVSYPLRDL 1027 ++ Q R ++DA R RD LGV LPE PL DL Sbjct: 1000 A-----VTVAEQRRWIAVEDAVRYRDGLGVELPELPPELLSTNGTGATAGSPTPDPLDDL 1054 Query: 1028 FLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-----QDIWVSDEVFR 1082 RY R H + A F L +VE L +L G+V + W + +V R Sbjct: 1055 VARYARTHGPFETAECAERFGLPGPLVEAALHRLDADGVVRHGSYTQDGSRQWCAVDVLR 1114 Query: 1083 RLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRV 1142 LR ++L A R PV Y L + QGV G G D V V Sbjct: 1115 LLRRKTLAALRAEISPVPVAKYVSFLADWQGVG---------------GKAIGTDAVADV 1159 Query: 1143 IEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQ 1202 ++QL G +PAS WES +LP RV +YS LDEL +G ++WSG L DG + Sbjct: 1160 LDQLQGTAIPASAWESTVLPVRVGEYSPAQLDELTGSGELLWSGSGGLPGTDGWLTFAYA 1219 Query: 1203 EYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEAL 1262 E A P ++A L + ++ L F + ++ + D + EAL Sbjct: 1220 ETAP-LLLPLPDEEAIAGDLHRELLDALESPR--FFRDLTGVVEG------DDPEVLEAL 1270 Query: 1263 WALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLA 1322 W LVW G +++D APLRA S +RR R GR + V P+ A Sbjct: 1271 WDLVWGGWVSNDSLAPLRAKLSGPSPKPQQSRRPRRP--GRFTVTRQ---AVRSAPPSAA 1325 Query: 1323 GRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGR 1382 GRW L + T R A +LDR+G++ R A GF + +ME+ G Sbjct: 1326 GRWYRLPDRDTDPTRRAHAATATLLDRHGVVVRGAAA--GHASGFAGQYPILSAMEERGA 1383 Query: 1383 IMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPA- 1441 RG FV GLG AQFAE +DRLR + L+A DPAN +G +PWPA Sbjct: 1384 ARRGYFVSGLGAAQFAEPGAVDRLRS-------ATPKGALVLAACDPANPFGAGMPWPAR 1436 Query: 1442 --HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE 1499 + R+AGALVV+ G+L Y+ +GG+ +L + + + TA R Sbjct: 1437 SSEESGHRAGRKAGALVVIVDGELAWYVERGGRTILTYTADRQRTVAAAEALVATA-NRG 1495 Query: 1500 PRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 R T+T V+ P+ TP+ L EAG ++P+GL +G Sbjct: 1496 GLARVTVTHVDGTPIAGTPVGAALTEAGLRATPKGLKFG 1534 >UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKU2_9GAMM Length = 1506 Score = 1351 bits (3497), Expect = 0.0, Method: Composition-based stats. Identities = 648/1566 (41%), Positives = 859/1566 (54%), Gaps = 118/1566 (7%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF AF Q T +Q + W H L+IAPTGSGKTLAAFL A+DRL E Sbjct: 6 FRPATDTWFGEAFGQATTIQSRGWPAIRAGRHCLLIAPTGSGKTLAAFLSAIDRLTGEPA 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + R + +LYISP+KAL TD++RNL+ PL GI R GE V IRTGD Sbjct: 66 PEPRTGYS-----VLYISPLKALATDIERNLRAPLTGITHTAARLGEPAREPVVHIRTGD 120 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TP ER R P DIL+TTPESLYL+L S+A E L V TVIIDEVHA+AG+KRGAHLA Sbjct: 121 TPQAERRAQAREPGDILVTTPESLYLLLGSKAAENLESVHTVIIDEVHALAGNKRGAHLA 180 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERL QRIGLSATV FLGGDR V V++ + I+ P Sbjct: 181 LSLERLAERCDQDPQRIGLSATVHPVEVARGFLGGDREVDVIDAAEPPRLDLEILAPEEP 240 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYI-------------------ETGILDEVLRHRST 295 + + + T E + GSI + E ++ +L HRST Sbjct: 241 PAEHAPATTETPEPASPIPSGSILGAVYGQGTGKLPAAGGDRAARLEPRLMAAILEHRST 300 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 IVF NSRGL E+L R+NE + + D + +H Sbjct: 301 IVFVNSRGLCERLVQRINEAWREQQPEDAEPVED---------------------LVAAH 339 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGSVS E+RA E LK+G LR +VATSSLELGIDMGAVDLVI V +P +VA GLQR GR Sbjct: 340 HGSVSHERRAEIEGRLKTGRLRGIVATSSLELGIDMGAVDLVIMVESPGAVARGLQRAGR 399 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 AGH VG VS+ L PR R DL++ AVI E M AG LE + PHNPLDVLAQQ VA Sbjct: 400 AGHGVGQVSRSLLLPRFRGDLLECAVIGERMQAGALEPIHAPHNPLDVLAQQLVAMVCER 459 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 VDE ++ +RRAAPW++L R + +ATLDMLSG YPS DF+ RP L W+R LT R Sbjct: 460 PRTVDELHALIRRAAPWRELSRALLEATLDMLSGHYPSTDFADLRPWLAWDRARDALTPR 519 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 GA L A + GTIPDRG+Y V + EG R+GELDEEMV+E + + +TLGA++W Sbjct: 520 RGAALAARLNAGTIPDRGLYGVHVGEG-----GPRIGELDEEMVFELKTGENVTLGASTW 574 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---DGAFFSGTI 652 ++ ITRD+V+V+PAPG +LPFW G+G GRP +LG+ IG LA + Sbjct: 575 HVEAITRDRVLVSPAPGEVGKLPFWHGDGPGRPIQLGQAIGAATERLAHMDRAERTAWLR 634 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 E + + I+EQR ATG +P R +V+ER RDE+GDWR+ + +P+G RVH P Sbjct: 635 EHAPLSEAAVETLCDYIDEQREATGQLPSDRRIVVERFRDEVGDWRVCILTPFGARVHAP 694 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 WA+A+ G + + G + V+ +DDGIV R+ D++ LP+ +PE+L + V +G Sbjct: 695 WALALQGALTSTSGFEVQVMYTDDGIVLRLADSE-DLPELDSLFPDPEELEEAVTRELGH 753 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 S LFA+ FRE AARALL+ PG RTPLW QRL++ QLL + Y FPV+LET R+ L Sbjct: 754 STLFASAFRENAARALLLVRNRPGQRTPLWAQRLKSQQLLASVREYASFPVVLETYRQVL 813 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 DV+DL AL ++R + I++ +V T SPFA SL+F YVA ++Y+ DAP+AER+A Sbjct: 814 ADVFDLDALREILRGVQERRIRVHEVETPQASPFARSLVFAYVAAYIYEQDAPMAERKAQ 873 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 L+LD +L LLGQ + EL+DP+ + ++E EL R + L DLLR G +T Sbjct: 874 ALTLDRGMLAELLGQAELRELIDPEALAELEAELAHATEATRVPDADALHDLLRRRGDLT 933 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 +++A +E +LE L R I+G+ R +DAA RDALGV P L Sbjct: 934 PDEVAA---ACAEAPGPWLEQLARSLRAVEVRIAGEPRWIAAEDAALYRDALGVVPPPGL 990 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ- 1071 P +L +PL L RY R H +E L + L + L+ L G+++ + Sbjct: 991 PAAFLEPPQHPLEQLLRRYARTHGPFRSEDLGARYGLAPGALLPALESLERAGVLLRGEI 1050 Query: 1072 -----QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFA 1126 + W ++ RRL+ R+L R+ V A RLL QG+ Sbjct: 1051 RPQGTGEDWCELDILRRLKRRTLARLRDEAAAVDARALGRLLPAWQGLTEP--------- 1101 Query: 1127 STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSG 1186 G + + QL G+ LP S W + +LP RVRD+S + LD + A+G +W G Sbjct: 1102 ------GRGASALRDTLTQLEGIALPWSAWIAHVLPMRVRDFSLDALDRITASGEFVWVG 1155 Query: 1187 QKKLGEDDGLVALHLQEYAAESFTP---AEADQANRSALQQAIVAVLADGGAWFAQQISQ 1243 LG+ DG + +E A P A A+ L QAI+ L GA F ++ + Sbjct: 1156 AGALGQRDGRIRFLRREQAMVLLEPEADAADTPASDDPLAQAILETLDRRGACFYMELER 1215 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 R ++ A++ A+W VW G IT+D +APLR+L + ++AR R Sbjct: 1216 AARSAQPDARQD-AIEAAIWDRVWAGQITNDTFAPLRSLGQRKTSARGRRRPGQGL---- 1270 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWSLLQ---VEPLNDTERMLALAENMLDRYGIISRQAVIA 1360 GRWS + ++ TER AEN+L RYG++SR+ A Sbjct: 1271 -----------------AGGRWSRVADLIDPDVSLTERAREQAENLLARYGVVSREMARA 1313 Query: 1361 ENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYT 1420 E +PGGF + + R+MED+G++ RG FVEGL GAQFA +DRLR L A T Sbjct: 1314 EGLPGGFGRVYPVYRAMEDAGKLRRGHFVEGLTGAQFARAGAVDRLRALERAADDT--PE 1371 Query: 1421 PVALSANDPANVWGNLLPWPAHPATL--VPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 P L++ DPAN WG LLPWP P R AGALV ++GG+ LLYLA G+++ VW+ Sbjct: 1372 PQWLASVDPANPWGQLLPWPQPPEAAEGRLRRVAGALVALAGGQPLLYLAASGRQLFVWE 1431 Query: 1479 EKEELLAPEVFHALTTALRREP--------RLRFTLTEVNDLPVRQTPMFTLLREAGFSS 1530 + E AL T R+ R T+ VN P RQ+P LR G Sbjct: 1432 AIPGIDTAEEHAALVTEAIRQLAGSRWLPKRRSITIETVNGEPARQSPFAAALRAGGAMG 1491 Query: 1531 SPQGLD 1536 +GL Sbjct: 1492 EVRGLR 1497 >UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococcales RepID=A7HB32_ANADF Length = 1553 Score = 1342 bits (3472), Expect = 0.0, Method: Composition-based stats. Identities = 655/1600 (40%), Positives = 890/1600 (55%), Gaps = 149/1600 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++F PA R+WF R+F+ PT Q W R E L++APTGSGKTLAAFL +DRL Sbjct: 11 ELFQPAVREWFSRSFEAPTPAQALAWPAIHRGESTLLLAPTGSGKTLAAFLSCIDRLM-- 68 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E +++ R++Y+SP+KAL DV+RNL+ PL GIA RG+ V +R+ Sbjct: 69 ---FAPEPARKERLRVVYVSPLKALAVDVERNLRAPLAGIAQVASGRGDVHRIPAVSVRS 125 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTPA ER++ R+P D+LITTPESLYL+LTS ARE LR VETVI+DE+HA+ +KRGAH Sbjct: 126 GDTPAPERARFARDPADVLITTPESLYLVLTSNAREVLRSVETVIVDEIHALVPTKRGAH 185 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG----------------------- 229 LALSLERL+AL QRIGLSAT R +VA FLGG Sbjct: 186 LALSLERLEALAGRRLQRIGLSATQRPLEEVARFLGGAEPGLPGGAPPARGRGRRRAQGG 245 Query: 230 --------------------------DRPVTVVNPPAMRHPQIRIVVPVANMDDV-SSVA 262 RPVT+V+ A + ++R+ VPV +M + ++ Sbjct: 246 AALDAGPGASPGASAIAEFRTGADLRHRPVTIVDAGARKALELRVEVPVEDMSRIGEALE 305 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 +G+ S A SIW I +L+ V HR+T+VF NSR +AE+L A LNEL Sbjct: 306 LASGDASQAPVRASIWTAIHPRLLELVRAHRTTLVFVNSRRIAERLAAALNEL------- 358 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 + + ++HHGS+++ QR E ALK G LR +VAT Sbjct: 359 ------------------------AGELLVQAHHGSIARPQRVAIEDALKGGRLRGLVAT 394 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SSLELGIDMGAVDLV+Q+ P SVASG+QRIGRAGH++G S+G+ FP+ R DL+ A + Sbjct: 395 SSLELGIDMGAVDLVVQIEAPPSVASGMQRIGRAGHRIGEASRGVVFPKYRADLLACAGL 454 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA 502 E M AG +E P NPLDVLAQQ VA ++D V+ Y VR AAP+ +L R V+D Sbjct: 455 TEAMHAGEVEATRYPRNPLDVLAQQIVAMVSLDDWDVEALYEAVRGAAPFAELSRSVYDG 514 Query: 503 TLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEG 562 LDMLSGRYPS +F+ RP++ W+R G L AR GA+ +AV +GGTIPDRG+Y V L G Sbjct: 515 VLDMLSGRYPSDEFAELRPRVTWDRVRGKLRAREGARRVAVVNGGTIPDRGLYGVYLAGG 574 Query: 563 EEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRG 622 K G RVGELDEEMV+ESRV + LGA++WRI++IT D+V+V+PAPG ++PFW G Sbjct: 575 --KQGHTRVGELDEEMVFESRVGETFLLGASTWRIEEITHDRVLVSPAPGEPGKMPFWHG 632 Query: 623 EGNGRPAELGEMIGDFLHLLADG---AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIV 679 + GRP ELG IG + L + A + + N+ +E+Q ATG V Sbjct: 633 DAAGRPLELGRRIGRLVRALREAPREAARERLVRAHDLDARAAENLLRFLEDQAQATGAV 692 Query: 680 PGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 P R +++ERCRDE+GDWR+ L +P G V PWA+A R GAD + ++DG Sbjct: 693 PDDRTILVERCRDELGDWRVCLLAPLGTPVLVPWAMAATVRARERLGADVETLWTNDGFA 752 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 R+P ++ PD + L +PE++ ++V +G++ALFAA+FRE A RALL+P R PG RT Sbjct: 753 MRLPGSEAP-PDVSFLLPDPEEVEELVIGQLGATALFAAKFREAAGRALLLPRRRPGQRT 811 Query: 800 PLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVT 859 PLWQQR R++ LL +A + FP++LE RECL+DV+DLPALE +++ L +++ Sbjct: 812 PLWQQRKRSADLLAVASRFGSFPILLEAYRECLRDVFDLPALEEVLQDLRARRVRLVTAD 871 Query: 860 TTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVI 919 T PSPFA SLLFG+VA F+Y DAPLAERRA LS+D LR LLG+ + ELLD + Sbjct: 872 TRVPSPFAASLLFGFVASFIYDGDAPLAERRAQALSIDQAQLRELLGEAELRELLDADAL 931 Query: 920 RQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKR 979 +E +LQ LAP R + +G+ DLL LG ++ E+LA+R ++ E+A+ E L+A +R Sbjct: 932 VALEAQLQHLAPATRVRSVDGIADLLLRLGDLSREELARR--TATPELAAGAERLVAERR 989 Query: 980 IFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVT 1039 I G+ERL ++DAAR RD LGV LP LPE L V L L RY R HA T Sbjct: 990 AVALRIGGEERLVAVEDAARYRDGLGVPLPPGLPEALLGPVPDALEGLAARYARRHAPFT 1049 Query: 1040 AEQLAHEFSLGIAIVEEQLQQLREQGLVMN------LQQDIWVSDEVFRRLRLRSLQAAR 1093 +LA + E L+ L E+G ++ + W EV R LR RSL R Sbjct: 1050 TGELAARLGISRGAAERALRALLERGRLLEGAFRPHGAEREWCDPEVLRGLRRRSLARLR 1109 Query: 1094 EATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPA 1153 E PV +AR+LL G+ P G+D V+ +E+L G LPA Sbjct: 1110 EEIEPVEPRAFARMLLGWHGI---------------PRRGRGLDAVLDAVEKLQGAPLPA 1154 Query: 1154 SLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTP-A 1212 SL E+++LPARV Y +D L A G V+W G + LGE DG +AL+L + + P Sbjct: 1155 SLLETELLPARVDGYLRGDIDALAAAGEVLWIGLEPLGERDGRIALYLADALPKLLPPVR 1214 Query: 1213 EADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVIT 1272 A + ++ LA GA F ++ Q +ALW LVW+G++T Sbjct: 1215 AAPEQPFGERAGRVLDHLARRGASFFAELHQAAGGGF-----EQQTVDALWDLVWRGLVT 1269 Query: 1273 SDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP 1332 +D + LRA ++ R R RA P GRW+L+ Sbjct: 1270 NDTFQALRAYAEPATARRERGRALARAPS--------AFRSRRAAPPAAGGRWTLVAARR 1321 Query: 1333 ------LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRG 1386 TE A A+ +L RYG+++R A AE IPGGF ++ + R +E+SGRI RG Sbjct: 1322 ELAGAVPTATEWSAATAQQLLVRYGLVTRGAAAAEAIPGGFSAVYDVLRHLEESGRIRRG 1381 Query: 1387 RFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAH---P 1443 FV G+G QFA+ +D LR L V L+A DPAN +G LL WPA P Sbjct: 1382 YFVAGVGAMQFAQPGVLDLLRALREPP---EAPEIVTLAATDPANPYGALLEWPAVQGGP 1438 Query: 1444 ATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE-------VFHALTTAL 1496 P R GA VV+ G+L ++++G +++ W + E L L Sbjct: 1439 EGKRPARAVGASVVLVDGELAAHVSRGARQLFAWLPEFEPERSHVGAAIAAAVVELVRVL 1498 Query: 1497 RREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 + + ++ P P+ L+ AGF + GL Sbjct: 1499 HGRDQAALVVE-IDGRPAAAHPLAGYLQAAGFVPTAAGLQ 1537 >UniRef50_D2QB27 ATP-dependent helicase lhr n=3 Tax=Bifidobacterium RepID=D2QB27_9BIFI Length = 1583 Score = 1339 bits (3465), Expect = 0.0, Method: Composition-based stats. Identities = 695/1646 (42%), Positives = 908/1646 (55%), Gaps = 193/1646 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++FS T+ WF AFK PT Q Q W + LV APTGSGKTL AFL A+D L E Sbjct: 6 NLFSEPTKAWFEHAFKCPTDTQRQAWPAIRSGGNVLVTAPTGSGKTLCAFLSAIDGLMGE 65 Query: 73 ------GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 G ++ R+LYISP+KALG DV +NL+ PL GIAD+ + G + Sbjct: 66 SAAGTVGDGGNTSGKPKRGVRVLYISPLKALGVDVAKNLETPLCGIADQCKASGLPAPKV 125 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 RV IR+GDT +ER + +PPDIL+TTPESL+LMLTS+AR L VETVI+DEVHAVAG Sbjct: 126 RVCIRSGDTAPKERRAIVNHPPDILVTTPESLFLMLTSKARRILSTVETVIVDEVHAVAG 185 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 SKRGAHLALSLERLD L+ QRIGLSATV + A FLGG + V ++N + Sbjct: 186 SKRGAHLALSLERLDGLVGHPVQRIGLSATVNPPEEAARFLGGAQAVRIINSGTRPAMDL 245 Query: 247 RIVVPV-------------------------ANMDDVSSVASGTGEDSHAGRE------- 274 ++V P+ + V+ E R+ Sbjct: 246 KVVEPLEYVHGPKSSEARCRAGGVDSPNPRTPRISGVTPAMESLAERKGIIRKATTGSPA 305 Query: 275 ------GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV 328 GS+WP IE +LDE+L+HR+T+VF NSRGLAEKLTARLN+++A + P Sbjct: 306 SPGLVGGSVWPAIERSVLDEILKHRTTLVFVNSRGLAEKLTARLNDMHAGMCRSEPHDVG 365 Query: 329 DAAHFESTSGATSNRVQSSDVF---------IARSHHGSVSKEQRAITEQALKSGELRCV 379 E +G + + S+ + IA +HHGSVSK++R E+ LK G+LRCV Sbjct: 366 SPEGREGFAGHYDSVIGSTTMLVGSHADGDAIAMAHHGSVSKDRRKQIEERLKRGQLRCV 425 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDS 439 VATSSLELGIDMG+VDLVIQ+A PLS++SGLQR+GRA HQVGGVS LF+P TR ++ + Sbjct: 426 VATSSLELGIDMGSVDLVIQIAPPLSISSGLQRVGRADHQVGGVSHALFYPITREQIIGT 485 Query: 440 AVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRV 499 A +E M AG +E LT P NPLDVLAQQTVAAAAMD L DEWY RVR+AA + DL R + Sbjct: 486 AACIESMRAGDIEPLTIPINPLDVLAQQTVAAAAMDDLDPDEWYGRVRKAASFTDLDRSI 545 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 FDA + M++G Y S DFS FRP L N E+G+++ARPGAQ LAVTSGGTIPDRGMY+V+L Sbjct: 546 FDAVMGMMTGAYDSEDFSVFRPPLQCNEESGLISARPGAQRLAVTSGGTIPDRGMYTVVL 605 Query: 560 PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPF 619 PE + G RRVGELDEEMVYESR D+ITLG ++W+IQ+ITRD+V+V PAPGR+ARLPF Sbjct: 606 PETDCGPGPRRVGELDEEMVYESREGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLPF 665 Query: 620 WRGEGNGRPAELGEMIGDFLHLLADGAFFS------------------------GTIPPW 655 W GEG+GR G G FL ++ G + Sbjct: 666 WHGEGDGRDYGFGLAQGRFLREISQGLRARTAENFRHANVDGVDVESRFDARIIARLRRD 725 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 ++N I N+ L+EEQR TGI+P R LV+ERCRDE GDWRII+HSPYGRRVHEPWA+ Sbjct: 726 GLDDNAIGNLADLLEEQRAITGIIPNDRELVIERCRDEEGDWRIIIHSPYGRRVHEPWAM 785 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 AI RI +G D V A+DDGI+ R+PD DG LP + LF+ + L +I+ VG S L Sbjct: 786 AITTRIRQRYGFDGQVYAADDGIIIRLPDVDGALPIRELVLFDLDDLHRIIEAQVGESVL 845 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 ++ARFRECAAR+L +P PG R PLWQQRLRA+QLL A+ +FP++LET RECLQDV Sbjct: 846 YSARFRECAARSLFLPRTDPGRRVPLWQQRLRAAQLLNAARARQNFPLLLETARECLQDV 905 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 YDLPAL R+M LN I +SDVTT TPSPFA S+LFG+V MYQ D P AER +LS Sbjct: 906 YDLPALRRIMTGLNSATIALSDVTTETPSPFAESMLFGFVGAVMYQYDVPQAERSTRLLS 965 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEEL--QRLAPGRRAKGEEG-LFDLLRELGPMT 952 +D E+L LLG D +LD VIRQV EL + G + + GP Sbjct: 966 MDPEVLERLLGGTDMSTVLDADVIRQVAHELAEKTFWNDLDKGDVTGRVTRYAKTHGPFV 1025 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 + + + + L+ L A + + E LA +L Sbjct: 1026 ADRMIADLDIDAVQAVRALDMLHAKGDLLTGHFADAEALAD----------------AAL 1069 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQ 1072 + V P+ Sbjct: 1070 TDSDSADVRSPIAHSSSPRAGTIGETD----------------------------YGTSS 1101 Query: 1073 DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGV 1132 W+ +VFRR+R RSL AR A +PV+ TY LL+RQGV P Sbjct: 1102 QQWLHRDVFRRIRSRSLAKARNAIKPVSPQTYQAFLLDRQGVGPVGGE-----------R 1150 Query: 1133 YEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK--- 1189 YEG+DG+MRVIEQL GV L A +WES + RVR Y MLDEL+A+G VIW G+ Sbjct: 1151 YEGIDGLMRVIEQLEGVSLAAQIWESSVFSTRVRGYHPSMLDELIASGDVIWVGEGAGDT 1210 Query: 1190 LGEDDGLVALHLQEYAA--ESFTPAEADQANRSALQQAIVAVLADGGAWFAQQIS----- 1242 ++ G +A + + E+ A+ + QAI+ L DGGA+ A Q+S Sbjct: 1211 AAKEVGNIAFYPADSPLVSETVASDTAEDDEALTVPQAIITALQDGGAFHASQLSATAKS 1270 Query: 1243 -------QRIRDKIGESV----DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNART 1291 ++ + GE + S +EALW+LVWQG +T+ +AP+RAL + S AR Sbjct: 1271 VWERHAEAQVDETTGEIIVPAWGESQFEEALWSLVWQGRVTNSSFAPVRALMQGSGIARA 1330 Query: 1292 STRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND----------TERMLA 1341 R R L G WS + + ER +A Sbjct: 1331 PKATLRRRVRMHTAV-----------PMTLGGLWSAVVAPRPIENGTATSNGGMEEREIA 1379 Query: 1342 LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERL 1401 E++LDRYG+I+ + + I GGF + + + ME+ G ++RG FV+G G AQFA Sbjct: 1380 RIESLLDRYGVIAAPLIDKDRIAGGFSRLYPVLKRMEEHGMLVRGLFVDGFGAAQFAGHD 1439 Query: 1402 TIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHP----------ATLVPTRR 1451 T+D LR Q + VAL DPA++ G + WP P RR Sbjct: 1440 TVDALRS----ENQWHSQSCVALEVTDPASLTGAAIAWPELEPTKTEKADGSRGAKPARR 1495 Query: 1452 AGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVND 1511 G++VV G+ +L+ +++ + + E L + L AL+R+ + E+N Sbjct: 1496 TGSIVVFKQGEPVLFAVPKSHRIMAFTDAEGTL-RQACSELVYALQRQSGGSISFNEMNG 1554 Query: 1512 LPVRQTP-MFTLLREAGFSSSPQGLD 1536 + ++Q LL AGF+ SPQG+ Sbjct: 1555 ISLKQRNKYMRLLHAAGFTESPQGMK 1580 >UniRef50_A1A256 ATP-dependent helicase II n=4 Tax=Bifidobacterium RepID=A1A256_BIFAA Length = 1625 Score = 1336 bits (3458), Expect = 0.0, Method: Composition-based stats. Identities = 698/1696 (41%), Positives = 929/1696 (54%), Gaps = 262/1696 (15%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+FS T+ WF AF PT Q W E+ LV+APTG GKTL AFL A+DRL + Sbjct: 17 DLFSEPTKAWFKHAFNAPTEAQRLAWPAIRSGENVLVVAPTGFGKTLCAFLSAIDRLMTK 76 Query: 73 GGED-----------------TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 G+D ++ + ++LYISP+KALG DV +NLQ PL GIA + Sbjct: 77 EGDDLLRTSGGGDGTAESDCNAKKRKPVRGVKVLYISPLKALGVDVAKNLQAPLAGIAGQ 136 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVET 175 G + VGIR+GDT QER ++ +PPDIL+TTPESL+L+LTS+AR L V+T Sbjct: 137 CEAMGLPSPKVSVGIRSGDTTPQERRRIVSHPPDILVTTPESLFLLLTSKARRILSAVDT 196 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 VI+DEVHA+AGSKRGAHLALSLERL++L S QRIGLSATV ++ A FLGG RPV V Sbjct: 197 VIVDEVHAIAGSKRGAHLALSLERLESLAGRSVQRIGLSATVEPPAEAARFLGGIRPVRV 256 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASG------------------------------- 264 + P + +++V P++ M D S +G Sbjct: 257 IRPESHPDMDLKVVEPLSAMRDPVSDDAGRRAGAVKLPNRHTTHISGVSPAMEALAERKG 316 Query: 265 ---TGEDSHAGRE---GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA- 317 G D H R GS+WP IE +LDEVL+H +T+VF NSRGLAEKLTARLN+LYA Sbjct: 317 LTSVGGDEHTSRVSTGGSVWPAIERSVLDEVLKHHTTLVFVNSRGLAEKLTARLNDLYAQ 376 Query: 318 ------------------------ARLQRSPSIAVDAAHFESTSGATSNRV--------- 344 RL R+ D A ++ + S + Sbjct: 377 LCTSRKTGSETAVKADAGRDALSDRRLGRTDLSVSDNASQPESTASDSTQPYPDLGSPEG 436 Query: 345 ---------------------QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 + IA +HHGSVSK++R E+ LK G+LRCVVATS Sbjct: 437 REGFAKHYDSVVGSTTMLVSSHADADAIAMAHHGSVSKDRRKQIEEQLKRGQLRCVVATS 496 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV 443 SLELGIDMG+VDLVIQ+A PLSV+SGLQR+GRA H+VGGVS LF+P TR ++ +A + Sbjct: 497 SLELGIDMGSVDLVIQIAPPLSVSSGLQRVGRADHKVGGVSHALFYPITREQIIGTAASI 556 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 ECM +G +E LT P PLDVLAQQTVAAAAMD L+ D+WY VR+AAP++DL R +FDA Sbjct: 557 ECMRSGDIETLTIPCTPLDVLAQQTVAAAAMDDLKPDDWYVTVRKAAPFEDLDRTMFDAV 616 Query: 504 LDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE 563 + M++G Y DFSAFRP L +N E G+++ARPGAQ LAVTSGGTIPDRG Y+V+LPE Sbjct: 617 MGMMTGAYNGEDFSAFRPPLQYNEEAGLISARPGAQRLAVTSGGTIPDRGTYTVVLPEEG 676 Query: 564 EKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE 623 G R+VGELDEEMVYESRV D+ITLG ++W+IQ+ITRD+V+V PAPGR+ARLPFW GE Sbjct: 677 SGPGPRKVGELDEEMVYESRVGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLPFWHGE 736 Query: 624 GNGRPAELGEMIGDFLHLLADGAFFS------------------GTIPPWLAEENTIANI 665 G+GR A G G F+ +A G + ++N I N+ Sbjct: 737 GDGRDAAFGRSQGRFIRDMAQGLRAEVSDGIAGDKTSRFDTTTIARLRRDGLDDNAIGNL 796 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 L+ EQR ATG +P R LV+ERC+DE GDWR+I+HSPYGRRVHEPWA+AI RI + Sbjct: 797 ADLLAEQRAATGTIPNDRELVVERCQDEEGDWRVIVHSPYGRRVHEPWAMAITTRIKQRY 856 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G D V A+DDGI+ R+PD DG LP + LF+ E+L +I+ VG S L+AARFRECAA Sbjct: 857 GFDGQVYAADDGIIIRLPDGDGNLPIRELLLFDTEELQRIIETQVGESVLYAARFRECAA 916 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 R+L +P PG R PLWQQRLRA+QLL A+ +FP++LET RECLQDVYDLPAL+ +M Sbjct: 917 RSLFLPRANPGRRVPLWQQRLRAAQLLNAARTRKNFPLLLETARECLQDVYDLPALKHVM 976 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 L G I +S+ T TPSPFA ++LFGYV MYQ D P AER +LS+D E+L LL Sbjct: 977 SGLRSGVISLSETVTETPSPFAENMLFGYVGAVMYQYDVPQAERSTQLLSMDPEVLERLL 1036 Query: 906 GQVDPGELLDPQVIRQVEEELQR--LAPGRRAKGEEG-LFDLLRELGPMTVEDLAQRHTG 962 G D LLD VI QV +EL G + ++ GP T + + Sbjct: 1037 GATDMASLLDADVIAQVGKELAGRTFWNDLDETDIAGRVARYVKTHGPFTADQMIAELGL 1096 Query: 963 SSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSY 1022 + + L+ L A + A DA D+ R P P+ +LH Sbjct: 1097 DAVQGVRMLDELHAKGELLKGHFVDD---AAGADANGSDDSASERSPRQTPQQWLH---- 1149 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFR 1082 +D+F R Sbjct: 1150 --KDVFRR---------------------------------------------------- 1155 Query: 1083 RLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRV 1142 +R SL AR+A +PV Y LL+RQGV P YE VDG+MRV Sbjct: 1156 -IRALSLAKARKAIKPVEPAVYQAFLLDRQGVGPVGGA-----------RYESVDGLMRV 1203 Query: 1143 IEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG---EDDGLVAL 1199 IEQL G+ L AS+WES + PARVRDY MLDELLA+G V+W G K G ++ G +A Sbjct: 1204 IEQLEGIYLNASVWESSVFPARVRDYQPSMLDELLASGDVVWVGSKINGSNAKEAGGIAF 1263 Query: 1200 HLQEYAAESFTPAE----ADQANRSALQQAIVAVLADGGAWFAQQISQR----------- 1244 H + + + A A + + I+AVL++GGA+ A+Q+S Sbjct: 1264 HPADSRLLTKPGEQSQNNAYSAGTMTVPETILAVLSNGGAFHARQLSTAAKAIWQEHAEV 1323 Query: 1245 -IRDKIGESVDLS----ALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA 1299 + + GE + + +EALW+LVWQG +T+ +AP+RALT+ + + R Sbjct: 1324 NVNPETGEIILPAWGESQFEEALWSLVWQGKVTNSSFAPVRALTQGTVSVRAPR------ 1377 Query: 1300 RRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND------------------TERMLA 1341 A+ + L G WS + + E +A Sbjct: 1378 -----TAARRRVRIHASTPATLGGLWSAVDSSRTSPMAIPDQTDDTAGKPTAGIEEYDIA 1432 Query: 1342 LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERL 1401 L E++LDRYG+I+ + E + GGF + + + ME+ G ++RG FV+G G AQFA R Sbjct: 1433 LIESLLDRYGVIAAPLIDKEQVAGGFSGLYPVLKRMEEHGNLVRGMFVKGFGAAQFAGRD 1492 Query: 1402 TIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGG 1461 T+D LR + R + VAL DPAN+ G+ + WP + P RA +++V+ G Sbjct: 1493 TVDALR----GDDEARSQSCVALDVTDPANLTGSAITWPEQ-HHMKPACRAESVIVLDHG 1547 Query: 1462 KLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMF- 1520 +L+ +++ + + E +L P L AL+ + + + E+N +++ + Sbjct: 1548 MPVLFAVPKSHRIVSFTDDERILQPAC-TELAYALQHQSKGSVSFAEMNGESLKERNEYR 1606 Query: 1521 TLLREAGFSSSPQGLD 1536 LL AGF SPQG+ Sbjct: 1607 RLLHAAGFVDSPQGMK 1622 >UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ98_KYTSD Length = 1660 Score = 1327 bits (3434), Expect = 0.0, Method: Composition-based stats. Identities = 707/1679 (42%), Positives = 927/1679 (55%), Gaps = 191/1679 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FSP TR WF F PTA Q W +R E+ +V+APTGSGKTL+AFL++LDR G Sbjct: 9 FSPPTRAWFEANFAAPTAAQAGAWDAISRGENTVVVAPTGSGKTLSAFLWSLDRFVPHGD 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + EA ++Y+SP+KAL DV+RNL PL GI R G + V +R+GD Sbjct: 69 QQRPEA----PCSVIYVSPLKALAVDVERNLSAPLSGIGHAATRLGGEAPQVSVSLRSGD 124 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER + D+LITTPESLYL+LTSRARE L GV TVI+DEVHA+AG+KRGAHLA Sbjct: 125 TPAAERRRFASGGADVLITTPESLYLLLTSRAREQLTGVTTVIVDEVHALAGTKRGAHLA 184 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR--HPQIRIVVPV 252 LSLERLDA+L AQRIGLSATVR +V +L G RPVT+V PPA + + VP Sbjct: 185 LSLERLDAMLERPAQRIGLSATVRPVDEVGRWLTGGRPVTIVQPPAEKAWELSVHADVPD 244 Query: 253 ANMDDVSSVASGTGEDSHAGR--------------------------------------- 273 + S D+ + Sbjct: 245 MADLSTAPQVSPAQPDAGSVPGGAGAAASAGDSAPGAPGVPGTSDVESELSLPEHLTLAD 304 Query: 274 ------------EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 SIWP++E I++E+ RH ST+VF NSR AE+LTARLNE++A R+ Sbjct: 305 LSPEVAGADPRDRASIWPHVEHRIVEEIARHTSTLVFCNSRRSAERLTARLNEIWAERVA 364 Query: 322 RSPSIAVDAAHFESTSG------------------------ATSNRVQSSDVFIARSHHG 357 + + A AA + +G A + + +AR+HHG Sbjct: 365 LADTDAGSAAEADEGAGGGDTDRGSAGRVTASSPRSPAEMMAQAGASAGAPAVLARAHHG 424 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 SVSKE RA E ALK+G L VVATSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAG Sbjct: 425 SVSKEHRAEIEDALKAGTLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAG 484 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 HQVG VS+G F R+DL+++AV+VE M +G +E L P NPLDVLAQQ VAA AMD Sbjct: 485 HQVGAVSRGSFHALHRQDLLETAVVVEQMRSGGIEALRIPANPLDVLAQQVVAACAMDDW 544 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG 537 V E ++ VRRAAPW DL R V ++ L+ML+GRYPS DF+ RP+LVW+R +LTARPG Sbjct: 545 SVGELHTMVRRAAPWSDLSRAVLESVLEMLTGRYPSEDFADLRPRLVWDRVDDLLTARPG 604 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 AQ LA+ SGGTIPDRG++ V L G ELDEEMVYESRV D+ TLG +SWRI Sbjct: 605 AQRLAILSGGTIPDRGLFGVFLAGGGGPGRRVG--ELDEEMVYESRVGDVFTLGTSSWRI 662 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPW 655 + IT DQV+V+PAPG+ +LPFW G+G GRPAELG +G F+ LA D A + Sbjct: 663 EDITHDQVLVSPAPGQPGKLPFWHGDGLGRPAELGGHLGAFVRELATGDEATLRARLTDG 722 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 +E + N+ + Q AT VP R +V+ER RDE+GDWR+++HSP+G VH PWA+ Sbjct: 723 GLDEWAVDNVLAHVAAQAEATTAVPDDRTVVVERFRDELGDWRVVIHSPWGSPVHAPWAL 782 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDG---------------------------- 747 +A R+ +G D + +DDGIV R+PD G Sbjct: 783 VLAERLRQRFGVDVQALHADDGIVLRLPDLGGWDAWAVPDAVAPAGAPGGGAGGPVGAPG 842 Query: 748 ------------------KLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 + + +PE++ V +G SALFA+RFRECAARALL Sbjct: 843 DGADAAASGTVALDARSLDVALGELVALDPEEVHDEVTALIGGSALFASRFRECAARALL 902 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 +P R P R LWQQR RA+ LLE+A G+P+FP++LE +RE +QDVYD+PAL LMRRL Sbjct: 903 LPRRRPDRRQALWQQRQRAASLLEVAAGHPEFPIVLEAVREVVQDVYDVPALTALMRRLA 962 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD 909 G E+++S V T T SPFA +L+FGYVA+F+Y+ D+PLAERRA+ L+LD LL +LLG+ D Sbjct: 963 GREVRLSFVETPTASPFAQNLMFGYVAQFLYEGDSPLAERRAAALALDPTLLADLLGRSD 1022 Query: 910 ---PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEE 966 +LLDPQ + E ELQ A RRA+ E L DLLR LGP+ +LA R + Sbjct: 1023 GTQLRDLLDPQAVADTEAELQHTAVDRRARHAEDLADLLRVLGPLDDAELAARSVPEGDP 1082 Query: 967 VASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRD 1026 A++ L +RI + G++ A ++D ARLRDALGV +P +P+ + + PL D Sbjct: 1083 -AAWTAELEGARRIVRVPVGGRDCWAVVEDVARLRDALGVPVPPGIPQAAMVVSTDPLTD 1141 Query: 1027 LFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ--------------- 1071 L +R+ R H AE LA + LG A+V L++L G V Sbjct: 1142 LLVRHARTHGPFRAEALAERYGLGRAVVVAALRELVRSGRVGEGALLPTALGGRDTDDGV 1201 Query: 1072 QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPG 1131 + +V RRLR RSL A R PV +AR +L QG+ Sbjct: 1202 GPDFCDADVLRRLRRRSLAALRAEVEPVDGDDFARFVLRWQGL---------------ED 1246 Query: 1132 VYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG 1191 GVD V R +EQL G LPAS ES +LPARVRDY+ MLDELLATG +W L Sbjct: 1247 PGRGVDAVARALEQLTGAVLPASAVESVVLPARVRDYAPGMLDELLATGEFLWVSHGLLA 1306 Query: 1192 EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGE 1251 DD V+ H + A + A+ D S L + +L GA + + + Sbjct: 1307 GDDLWVSFHPADQAEATLPLAQEDPDRASGL---VRELLTTRGAMRWADLRTAHQGARAD 1363 Query: 1252 SVDL------SALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR-RGRP 1304 D + +A+W LV QG T D +AP+RA + + R+ RAR GRP Sbjct: 1364 DADPVHLSTDTQWTDAVWDLVGQGRATCDTFAPVRARLAGGRTTQKTRPRARRARLSGRP 1423 Query: 1305 VYAQPVSP------RVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAV 1358 Q +S R LAGRWS+L + T R +A AE LDR+G+++R AV Sbjct: 1424 ASLQGLSGAAVRRDRPVSTPDVLAGRWSVLPERDDDPTVRAVAAAEVALDRHGVVTRGAV 1483 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 AE + GGF ++ + + ED+GR+ RG FV+GLG AQFA +D LR + Sbjct: 1484 AAEEVAGGFSALYKVLAAAEDAGRVRRGYFVDGLGAAQFATAGAVDLLRG------EQPR 1537 Query: 1419 YTPVALSANDPANVWGNLLPWPA-HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVW 1477 LSA DPA V G LPWP P+R+AGALV + G ++ +GG+ L + Sbjct: 1538 VQARLLSACDPAVVHGAALPWPETTGGGHRPSRKAGALVALVEGVPAVWWERGGRTALTF 1597 Query: 1478 QEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR--QTPMFTLLREAGFSSSPQG 1534 E LA A ++ ++ ++P+ L AGF ++P+G Sbjct: 1598 TLDPEALAQAAEVAARAVR-ERRIAGLSVETIDGEAALRTESPLVAALEAAGFGATPKG 1655 >UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinomycetales RepID=C6W9K2_ACTMD Length = 1606 Score = 1323 bits (3423), Expect = 0.0, Method: Composition-based stats. Identities = 700/1440 (48%), Positives = 883/1440 (61%), Gaps = 59/1440 (4%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 FSPATR WF AF PTA Q W AA E+ALVIAPTGSGKTLAAFL+ALDRL +E Sbjct: 4 AFSPATRQWFAGAFAAPTAAQAGAWEAAAAGENALVIAPTGSGKTLAAFLWALDRLAQEP 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 D R+ R+LY+SP+KAL DV+RNL+ PL GI RR G E + VG+RTG Sbjct: 64 PPD----EPRERCRVLYVSPLKALAVDVERNLRAPLAGIRQASRRLGLPEPAIEVGMRTG 119 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTPA R R PPD+L+TTPESL+L+LTS ARE+LRGV TVI+DEVHAVAG+KRGAHL Sbjct: 120 DTPADVRRAFARKPPDVLVTTPESLFLVLTSAARESLRGVRTVILDEVHAVAGTKRGAHL 179 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERLD LL AQRIGLSATVR +V+AFL G RPV VV P + + ++R+ VPV Sbjct: 180 ALSLERLDGLLERPAQRIGLSATVRPVEEVSAFLAGGRPVRVVQPESAKTIEVRVEVPVE 239 Query: 254 NMDDV-SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 +M + +G + R SIWP +E +L+ V HRSTIVF NSR LAE+LTARL Sbjct: 240 DMSALGEPTGEVSGSAAGGERRTSIWPAVEQRVLELVREHRSTIVFANSRRLAERLTARL 299 Query: 313 NELYAARLQRSPSIAVD------------------AAHFESTSGATSNRVQSSDVFIARS 354 NEL A + A A F + + S IAR+ Sbjct: 300 NELAAEAAEGGGPGADGPGADGLGEGAGQGGSGSAVARFPAAAVGQSGVTVQEGPVIARA 359 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGS+S+EQR E+ LKSG L CVVATSSLELGIDMGAVDLV+QV P +VASGLQR+G Sbjct: 360 HHGSMSREQRTSVEEELKSGRLPCVVATSSLELGIDMGAVDLVVQVEAPPTVASGLQRVG 419 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 RAGHQVG VS+G+ FP+ R DLV AV+ E M G +E + P NPLDVLAQ VA A+ Sbjct: 420 RAGHQVGAVSRGVVFPKFRGDLVSCAVVAERMRDGAIEAVRYPRNPLDVLAQHVVAMVAL 479 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 + V++ VR AAP+ LP A LDML+GRYPS +F RP++ W+R TG L Sbjct: 480 EPWSVEDLARVVRGAAPFAGLPESALLAVLDMLAGRYPSEEFGELRPRITWDRVTGELRG 539 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATS 594 RPGAQ LAVTSGGTIPDRG+++V+ P E K GSR VGELDEEMVYESRV D LG +S Sbjct: 540 RPGAQRLAVTSGGTIPDRGLFAVMTPASESKPGSR-VGELDEEMVYESRVGDTFLLGTSS 598 Query: 595 WRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--GAFFSGTI 652 WR++ IT D+V+V PAPG+ AR+PFW+G+ GRP ELG +G FL ++ G Sbjct: 599 WRVEDITHDRVVVVPAPGQPARMPFWKGDAPGRPLELGRALGRFLREVSALPEPEAVGRA 658 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 +E AN+ ++EQR ATG VP R +++ER RDE+GDWR+++HSP+G +V+ P Sbjct: 659 AAAGLDEWATANLLTYLKEQREATGHVPSDRAVLVERFRDELGDWRLVVHSPFGAQVNAP 718 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDT-----DGKLPDAAIFLFEPEKLLQIVR 767 WA+AI R+ G DA V SDDGIV R+PD + A L +P+++ Q+V Sbjct: 719 WALAIGARLRERRGVDAQVAHSDDGIVVRLPDAVDAEGGQAVAGAEDVLLDPDEVEQVVV 778 Query: 768 EAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILET 827 VG SALFAARFRECAAR+LL+P R P RTPLWQQR RA+QLL +A Y FPV+LE Sbjct: 779 AEVGGSALFAARFRECAARSLLLPRRDPRRRTPLWQQRQRAAQLLSVASKYESFPVVLEA 838 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 +RECLQDVYD+P L LM + +++ +V T +PSPFA SLLFGYV F+Y++D PLA Sbjct: 839 MRECLQDVYDVPGLRELMADVRARRVRVVEVETPSPSPFARSLLFGYVGMFLYEADTPLA 898 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 ERRA+ LSLDS LL LLG ELLDP+V+ +VE LQRLAP R A+ EG DLLR Sbjct: 899 ERRAAALSLDSALLAELLGSEAIRELLDPEVLEEVERALQRLAPDRHARDAEGAADLLRF 958 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVR 1007 LG ++ E+ A+R +L L+A +R I+G ER+ ++DA R+RDALGV Sbjct: 959 LGDLSEEEAAERGVR-----PEWLTELVAARRAIRVRIAGHERVITIEDAGRVRDALGVA 1013 Query: 1008 LPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLV 1067 LP +PE++ V+ PL DL RY R H A Q A F LG+A+V L+++ G + Sbjct: 1014 LPVGVPEVFTEPVADPLGDLLGRYARTHGPFPAGQAAERFGLGVAVVTGVLERMAATGRL 1073 Query: 1068 MNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGS 1121 + + + EV RRLR SL R PV R L GV G+ Sbjct: 1074 VRGELRPGGTHTEYCDAEVLRRLRRSSLARLRSEVEPVEPAALGRFLPGWHGVGRRVRGA 1133 Query: 1122 PALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGA 1181 P D V V+EQLAG LPAS ES +LPAR+ Y +LDEL A G Sbjct: 1134 PT------------ADDVYAVVEQLAGAPLPASAVESLLLPARLPGYHPALLDELTAAGE 1181 Query: 1182 VIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQI 1241 V W+G L DG VAL + A + A S L A+V LA GGA F +Q+ Sbjct: 1182 VTWTGCGALAGGDGWVALAPTDVADLLLPDLVPESAPESPLHTAVVEALA-GGALFFRQV 1240 Query: 1242 SQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARR 1301 R+ + + ALW LVW G++T+D APLRAL A R + R R Sbjct: 1241 VDRVA--LQGPTTDQEVVGALWDLVWAGLVTNDTLAPLRALVSGGG-AHKPKRTTPRGRY 1297 Query: 1302 GRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAE 1361 R +P P P +AGRWSL V + T R A AE L+R+G+++R A+ E Sbjct: 1298 ARMRATRPDMP-SRTGPPTVAGRWSLAVVPSPDPTRRAHARAEAFLERHGVLTRGALDTE 1356 Query: 1362 NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP 1421 + GGF ++ + R+ME+SG+++RG VEGLG AQFA R +DRLR L+ +T Sbjct: 1357 RVTGGFSAVYRVLRAMEESGQVVRGYVVEGLGAAQFAARGAVDRLRALSAPPDRTGSEWA 1416 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%) Query: 1409 LATQATQTRHYTPVALSANDPANVWGNLLPWPAH--PATLVPTRRAGALVVVSGGKLLLY 1466 + + + T V L+A DPA +G L WP P R+AGAL V+ G+ +LY Sbjct: 1475 VRSAGSAGSGPTTVVLAAADPAQPYGAALSWPEQVGGGKHRPGRKAGALAVLVDGEAVLY 1534 Query: 1467 LAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREA 1526 + +GGK +L + E++E L L A+R + ++ + + + +L+EA Sbjct: 1535 VERGGKSLLSFTEEDEPL-RAAAQGLGRAVRDGWLGQLSVQRADGEVALGSKLAGVLQEA 1593 Query: 1527 GFSSSPQGLD 1536 GF ++P+GL Sbjct: 1594 GFRATPKGLR 1603 >UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria RepID=Q2IJM9_ANADE Length = 1536 Score = 1296 bits (3354), Expect = 0.0, Method: Composition-based stats. Identities = 657/1589 (41%), Positives = 886/1589 (55%), Gaps = 124/1589 (7%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 MA +PD +++ F PA R WF RAF+ PT Q W R E L++APTGSGKTLA Sbjct: 1 MARSPDAAAV---PFHPAVRAWFERAFQAPTRAQALGWPPIHRGESTLLLAPTGSGKTLA 57 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL +DRL + E +R+ R++Y+SP+KAL DV+RNL+ PL GIA RG Sbjct: 58 AFLSCIDRLM-----FSPEPPRRERLRVVYVSPLKALAVDVERNLRAPLAGIAQVAAERG 112 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 + V +RTGDTPA ER++ R+P D+LITTPESLYL+LT ARE LR VETVI+DE Sbjct: 113 DAHRIPSVAVRTGDTPAAERARFARDPADVLITTPESLYLLLTQAAREGLRTVETVIVDE 172 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---------- 230 +HA+ SKRGAHLALSLERL+ L QRIGLSAT R +VA FLGG Sbjct: 173 IHALVPSKRGAHLALSLERLEQLAGRPLQRIGLSATQRPLDEVARFLGGARPAAPAGAGE 232 Query: 231 -----------------RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGED-SHAG 272 RPVTVV+ + + ++ + VPV +M + G D S A Sbjct: 233 AEGALGELRDRAARPAWRPVTVVDAGSRKALELTVEVPVEDMARLGEPLDLPGGDASQAP 292 Query: 273 REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH 332 SIW I +L+ V HR+T++F NSR +AE+L LNEL L Sbjct: 293 PRASIWTAIHPRLLELVKAHRTTLLFVNSRRVAERLAGALNELAGETL------------ 340 Query: 333 FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG 392 ++HHGS+++ QR E LK+G +R +VATSSLELGIDMG Sbjct: 341 -------------------VQAHHGSIARPQRIAIEDNLKAGRVRGLVATSSLELGIDMG 381 Query: 393 AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE 452 +VDLV+Q+ P SVASG+QRIGRAGHQVG S G+ FP+ R DLV A + E M G +E Sbjct: 382 SVDLVVQIEAPPSVASGMQRIGRAGHQVGAPSAGVLFPKYRGDLVACAALTEAMQEGDVE 441 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 NPLDVLAQQ VA ++D +VD+ ++ +R AAP+ +LPR + + LD+LSGRYP Sbjct: 442 ATRYLRNPLDVLAQQIVAMVSLDDWRVDDLHAALRGAAPFAELPRGILEGVLDLLSGRYP 501 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVG 572 S + + RP++ W+R G+L AR GA+ +AV SGGTIPDRG+Y V L G + G RVG Sbjct: 502 SEELAELRPRVTWDRVRGVLRAREGARRVAVVSGGTIPDRGLYGVYLLGGAK--GQARVG 559 Query: 573 ELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELG 632 ELDEEMV+E+ V + TLGA++WR+++IT D+V+V+PAPG ++PFW G+ RP ELG Sbjct: 560 ELDEEMVFETAVGETFTLGASTWRVEEITHDRVLVSPAPGEPGKMPFWHGDAAARPVELG 619 Query: 633 EMIGDFLHLLA---DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLER 689 IG + L A + N+ +E+Q+ A G VP R +++ER Sbjct: 620 RRIGRLVRELRGVPRAAALERLRARHGLDARAAENLVRYLEDQQQAAGAVPDDRTVLVER 679 Query: 690 CRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 CRDE+GDWR+ + +P+G V PW +A A R GAD + ++DG R+P+TD + Sbjct: 680 CRDELGDWRVCVLAPFGSAVLVPWCMAAARRARDRLGADPETLWTNDGFALRLPETD-QP 738 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 P+ EPE++ +V E +G++ALFAARFRE +ARALL+P R PG RTPLWQQR RA+ Sbjct: 739 PEVDFLFPEPEEVEALVVEQLGATALFAARFREASARALLLPRRRPGQRTPLWQQRKRAA 798 Query: 810 QLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATS 869 LL +A + FP++LE RECL+DV+DLPAL LMR L G ++ + T PSPFA S Sbjct: 799 DLLAVASRFAQFPLLLEAYRECLRDVFDLPALVELMRDLKAGRVRRAVADTRVPSPFAGS 858 Query: 870 LLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRL 929 LLFG+VA F+Y DAPLAERRA L++D LR LLG+ + ELLD + +E LQ L Sbjct: 859 LLFGFVASFIYDGDAPLAERRAQALAIDQAQLRELLGEAELRELLDADALADLEARLQLL 918 Query: 930 APGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQE 989 P R + +GL D+L LG ++ ++ +R +S EVA+ L+ L+A +R P + G+E Sbjct: 919 RPELRVRSADGLADMLLRLGDLSRAEVERRS--ASPEVAASLDRLVAERRAVPLRVGGEE 976 Query: 990 RLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSL 1049 R ++DAAR RD LGV LP +PE L V L L R+ R HA TA +LA L Sbjct: 977 RFVAVEDAARYRDGLGVPLPPGVPEALLAPVPDALDGLVARHARRHAPFTAGELAARLGL 1036 Query: 1050 GIAIVEEQLQQLREQGLVMN------LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATT 1103 G A E L++L G ++ + W +V R LR RSL RE PV Sbjct: 1037 GRAAAERVLERLARAGRLLEGAFRPHGAEREWCDPDVLRTLRRRSLAKLREEIEPVEPRV 1096 Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 R LL G+ G+D V+ +E+L G LPASL ES+ILPA Sbjct: 1097 LGRTLLGWHGITR---------------RAAGLDAVLDAVEKLQGAPLPASLLESEILPA 1141 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQ 1223 RV Y LD L A G V W G + LGE DG VA+ L + PA A + + Sbjct: 1142 RVEGYLPGDLDALAAGGEVTWVGLEPLGERDGRVAIFLADALPALLPPAPAAEPPEDPRE 1201 Query: 1224 QAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 + I+ LA GA F ++ + +A+WALVW+G++T+D + + Sbjct: 1202 RRILDHLAHRGACFFPELHEAAGGGFA-----QQTVDAIWALVWRGLVTNDTF----QVL 1252 Query: 1284 RSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE-------PLNDT 1336 R+ + R RARR A P GRW+L++ T Sbjct: 1253 RARAARAAPRRDRERARRTARRAAAAGYRSRLSAPPGAGGRWTLVEARRDAGGRPRPTPT 1312 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 + ALA+ +L RYG+++R AE +PGGF ++ + R +E+SGRI RG FV G+G Q Sbjct: 1313 QWSAALAQQLLARYGVVTRGVAAAEALPGGFGAVYDVLRHLEESGRIRRGYFVAGVGAMQ 1372 Query: 1397 FAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPA---TLVPTRRAG 1453 FA+ +D LR V L+A DPAN WG L+ WP P P R G Sbjct: 1373 FAQPGALDLLRASRE---PGEAPEVVTLAAADPANAWGALVEWPPVPGAPEGKRPARAVG 1429 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRF------TLT 1507 A VV+ G + A+G +++L W ++E V A+ AL R L Sbjct: 1430 AEVVLVDGAPGAWAARGLRQVLAWLPEDEPDRSRVGEAVAGALAALARDALARGEGALLE 1489 Query: 1508 EVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 EVN + P+ L +AGFS + L Sbjct: 1490 EVNGVAAATHPLAGFLVQAGFSPAGTALQ 1518 >UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Micrococcineae RepID=C5BWN7_BEUC1 Length = 1668 Score = 1288 bits (3332), Expect = 0.0, Method: Composition-based stats. Identities = 684/1645 (41%), Positives = 899/1645 (54%), Gaps = 154/1645 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR WF +F PT Q W A +HALV+APTGSGKTLAAFL+ALD L Sbjct: 42 FSEPTRTWFAESFPAPTEAQAGAWEAIAGGDHALVVAPTGSGKTLAAFLWALDALLGAEA 101 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 D E R+LYISP+KAL DV+RNL+ PL GI+ R+G ++RVG+RTGD Sbjct: 102 PDDAE-----RCRVLYISPLKALAADVERNLRSPLVGISRIAARQGHPVRDVRVGMRTGD 156 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER + P DILITTPESL+L+LTS AR L GV TVI+DEVHA+AGSKRGAHLA Sbjct: 157 TPAGERRRFATKPTDILITTPESLFLVLTSAARAGLAGVTTVILDEVHALAGSKRGAHLA 216 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFL-------GGDRPVTVVNPPAMRHPQIR 247 LSLERLDA+L AQRIGLSATVR +V FL G R V V PP+ + +I Sbjct: 217 LSLERLDAMLPRPAQRIGLSATVRPVEEVGRFLAGARTIGDGGRSVRTVQPPSHKEIRID 276 Query: 248 IVVPVANMDDVSSVASGTGEDSHA--------GREGSIWPYIETGILDEVLRHRSTIVFT 299 + VPV +++D+ A R S+WP++ ++D + HR+T+VFT Sbjct: 277 VEVPVPDLEDLGDAERELDLSGDAAGLLPDARPRTASVWPHVTERVVDIISAHRTTLVFT 336 Query: 300 NSRGLAEKLTARLNELYAAR-------------------------------LQRSPSIAV 328 NSR AE+LTAR+NE +A R P+ Sbjct: 337 NSRRGAERLTARINEAWAERRLAVEGAIADDGDGDGDGDPGYDVDPSDDVEGAAPPADPG 396 Query: 329 DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 A ++ + + + D +AR+HHGS+S+E+R E LK+G L VVATSSLELG Sbjct: 397 SAWGAQTPGQSGTALAVAGDAVVARAHHGSMSREERTRIEDDLKAGRLPAVVATSSLELG 456 Query: 389 IDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFA 448 IDMG++D+V+QV P SVAS LQRIGRAGHQVG VS G+ P R DL+ +AV Sbjct: 457 IDMGSIDVVVQVGAPPSVASELQRIGRAGHQVGAVSHGVVLPTHRGDLLAAAVAAVRGRE 516 Query: 449 GRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 G +E+L P NPLDVLAQQ VA AMD +V E + VRRAAP+ L A LDML+ Sbjct: 517 GAIEHLHIPANPLDVLAQQVVAMLAMDDWKVAELTALVRRAAPYAGLGDASLAAVLDMLA 576 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE---K 565 GRYPS DF+ RP++VW+R +L+ARPGA LA TSGGTIPDRG+Y V L G E Sbjct: 577 GRYPSEDFAELRPRIVWDRVDDVLSARPGALRLAATSGGTIPDRGLYGVYLAAGAEDVAT 636 Query: 566 AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGN 625 G RRVGELDEEMVYESRV D TLG ++WRI+ IT D+V+V+PA G RLPFWRG+ Sbjct: 637 RGGRRVGELDEEMVYESRVGDTFTLGTSTWRIEDITPDRVLVSPAAGLPGRLPFWRGDAP 696 Query: 626 GRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHL 685 GRP ELG +G + + + + W +E N+ + QR ATG + + Sbjct: 697 GRPFELGAALGAMVRDVERAREPAELLTGWGLDEWARDNLLAYLTAQREATGHLSTDHTI 756 Query: 686 VLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDT 745 V+ER RDE+GDWR+++H+P+G RVH PWA+A+A R+ +G D + +DDGIV R+PD Sbjct: 757 VVERFRDELGDWRLVIHTPFGARVHAPWALALASRLQDRFGMDVQAMHADDGIVLRLPDA 816 Query: 746 D------------GKLPDAA--------------IFLFEPEKLLQIVREAVGSSALFAAR 779 G PDAA L +P+++ V A+ SA FAAR Sbjct: 817 GGGDDDLGAVPLPGGWPDAAAADSAGPGTQVDLADLLLDPDEVSGAVTAALAGSAHFAAR 876 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRE AARALL+P R P R PLWQQR RA+QLL +A YPDFP++LE +RECLQD +D+P Sbjct: 877 FREAAARALLLPRRRPDRRQPLWQQRHRAAQLLGVAARYPDFPIVLEAVRECLQDDFDVP 936 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 AL LMR++ EI++ +VTTT PSPFA SLLFGYV +F+Y DAPLAERRA+ L+LD Sbjct: 937 ALADLMRQVAAREIRVLEVTTTAPSPFARSLLFGYVGQFLYDGDAPLAERRAAALTLDPA 996 Query: 900 --LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 G D +LLD + VE ++ L R + EG FDL+R LGP+ E++A Sbjct: 997 LLGELLGEGLTDLADLLDAGAVADVEAQVGLLTEASRVRDAEGAFDLVRRLGPVPAEEVA 1056 Query: 958 QRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYL 1017 +R E V +L +L +RI ++G+E+ + +DA RLRDALG LP LP L Sbjct: 1057 RR-ALDPEAVPGWLADLERQRRIIAVRVAGREQWSAAEDAGRLRDALGTALPLGLPAAVL 1115 Query: 1018 HRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN-------- 1069 V P DL R+ R H TA ++AH F L V L+ G + Sbjct: 1116 ESVPDPFGDLVRRHARTHGPFTAAEVAHRFGLAPGAVLPVLRTFERDGTLTAGRLRPAAS 1175 Query: 1070 ------------LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPA 1117 ++ + EV RR+R RSL A R V T L Q + Sbjct: 1176 GASAGSDGVPEPGAREEFCDSEVLRRIRRRSLAALRADVEAVPPATLGVFLPRWQQL--- 1232 Query: 1118 TDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELL 1177 G G DGV+ ++QLAG LP+S E+ +LPARVRDY+ MLDEL Sbjct: 1233 -------------GTLRGTDGVLAAVDQLAGARLPSSALETTVLPARVRDYAPAMLDELT 1279 Query: 1178 ATGAVIWSGQKKLGEDDGL---VALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGG 1234 + G V+W G + L + AA + L + +V VLADGG Sbjct: 1280 SAGEVVWVGTGGSPGGGPSDGTIVLVPTDAAAVLAPLPGELP---TELARRVVEVLADGG 1336 Query: 1235 AWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS-- 1292 +F + GE ++ + +ALW VW G +T+D APLRA + + Sbjct: 1337 RFFRDLYAAIASAADGEPPAVAEVHDALWDAVWAGHVTNDTLAPLRARLEQRPSTSSRRA 1396 Query: 1293 ------------TRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERML 1340 +RR+ + + AGRWS++ + T R+ Sbjct: 1397 AAARSPRSRSALSRRALMTPALAAAGSTAAQAARIPTPASAAGRWSVVGAVETDPTIRLA 1456 Query: 1341 ALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAER 1400 A A +LDR+G++ R AV AE +PGGF ++ + +E+SG++ RG VEGLG +QFA Sbjct: 1457 ATAAALLDRHGVLVRGAVAAEEVPGGFGALYRVLVRLEESGQVRRGYVVEGLGASQFALP 1516 Query: 1401 LTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHP-------ATLVPTRRAG 1453 IDRLR A + PV L+A DPAN +G LPWPA P P R G Sbjct: 1517 ECIDRLR-----ADAAANPGPVLLAAVDPANPYGAALPWPAAPTSAEGVTTGARPRRVPG 1571 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLP 1513 A VV+ G L+LYL +G + +L + + L A R + + Sbjct: 1572 AHVVLVDGALVLYLERGARTLLSFTADDARLRAAAAALANAAAS-GALGRVVVQRSDGAA 1630 Query: 1514 --VRQTPMFTLLREAGFSSSPQGLD 1536 V TP+ L +AGF ++P+GL Sbjct: 1631 TLVADTPLRQALLDAGFVATPRGLR 1655 >UniRef50_Q67R22 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67R22_SYMTH Length = 1466 Score = 1260 bits (3261), Expect = 0.0, Method: Composition-based stats. Identities = 619/1568 (39%), Positives = 842/1568 (53%), Gaps = 157/1568 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F PA R WF F +P+ Q Q W AR E+ L++APTGSGKTLAAFL LD L+++ Sbjct: 7 ETFHPAVRAWFEERFGRPSPPQAQGWPAIARGENVLILAPTGSGKTLAAFLKCLDILYQQ 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++LYISP+KAL D+ RNL+IPL GI + R G +L +RT Sbjct: 67 G------VRREPGVQVLYISPLKALNNDIYRNLEIPLAGIEAKARELGLPLPHLTHAVRT 120 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP QER ++ RNPPDILITTPESLYL+LTSR+R+ LR V VI+DE+HA+ SKRGAH Sbjct: 121 GDTPQQERKEMRRNPPDILITTPESLYLLLTSRSRDILRTVRYVIVDEIHALCTSKRGAH 180 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVP 251 L+LSLERL+ALL RIGLSAT+R +VA +LGG RPVT+V+ A R +R+ VP Sbjct: 181 LSLSLERLEALLPRPPVRIGLSATLRPLEEVARYLGGTGRPVTIVDAGARRELDLRVEVP 240 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 VA+M A E SIWP I +L+ V HRSTIVF +SRGLAE+L + Sbjct: 241 VADMR--------------ALPESSIWPAIYRRVLELVAAHRSTIVFVSSRGLAERLAGQ 286 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 LN L +AR HHGS+S+E R E L Sbjct: 287 LNALAGRE-------------------------------VARVHHGSLSREAREQVEAEL 315 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G L C+VATSSLELGID+GAVDLVIQ+ +P +V+ GLQR+GRAGH +G V+KG P+ Sbjct: 316 KAGRLPCLVATSSLELGIDVGAVDLVIQIESPGTVSRGLQRVGRAGHVLGAVAKGRLLPK 375 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 R DL+++A IV M G LE P LDVLAQQ VA AAMD +VD+ + VRRA Sbjct: 376 YRGDLLETAGIVREMRRGNLEETRVPTGALDVLAQQIVAMAAMDEWRVDDLLALVRRAWG 435 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++DL R L+ML+GRYP+ +F RP++VW+RE G++ R GA+ LAV SGGTIPD Sbjct: 436 YRDLTERQLHGVLEMLAGRYPAAEFRELRPRIVWDREVGVIRGREGARALAVLSGGTIPD 495 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 RG Y+V L + K +GELDEE VYESRV D+ LG+ +W+I+ I D+V+ PAP Sbjct: 496 RGYYTVYLEGSDVK-----LGELDEEFVYESRVGDVFLLGSATWQIRAIEHDRVVAAPAP 550 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----DGAFFSGTIPPWLAEENTIANIQG 667 GR R+PFW+GEG GRP ELG +G F +A D +E N+ Sbjct: 551 GRMPRMPFWKGEGPGRPPELGRKLGAFTGEVAARLNDPDLLQWLQAECCLDERAARNLVQ 610 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 + +Q TG+VP R LVLER DE+GD R+ L SP+G RV+ W + I RI L Sbjct: 611 YLRDQVAHTGVVPTDRRLVLERFPDELGDERLALLSPFGGRVNTAWGMVIRARIRQLLQL 670 Query: 728 DASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 +A V SDD I R+P D L + +PE+ + ++ + VG++ LF+A FR A RA Sbjct: 671 EAEVTTSDDVIHIRLPGADRPLDPEILVRVDPEEAVGLLLQEVGATPLFSAHFRMNAGRA 730 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 L++P PG R P W QRL+A+ LL++A+ YPDFP++LET RE L+DV DL L +++ Sbjct: 731 LVLPRPRPGRRRPFWLQRLKAADLLQVARRYPDFPLVLETYREVLRDVLDLEGLRQVLEG 790 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ 907 L GEI+++ V T +PSP A+ +L +VAE+MY+ DAP AER ++L+L+ ELL LLG Sbjct: 791 LASGEIELAVVETDSPSPMASQILLQFVAEYMYEGDAPKAERHGALLTLNRELLDELLGS 850 Query: 908 VDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEV 967 ELLDP+ I V L+ A G + +G + + DLLR G MT +LA G S E Sbjct: 851 GALRELLDPRAIAAVAARLRGQAEGWQPRGPDEVEDLLRRAGDMTEAELAA--AGVSPEW 908 Query: 968 ASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDL 1027 + LE R+ A +DDA+ R PE + V Sbjct: 909 LARLEAERRAVRLIGAGRGDGAHWVHVDDASLYRR----------PEADVAEV------- 951 Query: 1028 FLRYLRAHALVTAEQLAHEF------SLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVF 1081 RY RAH +++A + A +L + EV Sbjct: 952 VRRYARAHGPFRPDEVARRYALAEEDVAAAAEALATAGELAAGEFTRGATGREYCDPEVL 1011 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEG------ 1135 R++R ++L R PV YAR LLE G+ P T GS A + G + Sbjct: 1012 RQIRRQTLTLLRAEVEPVDGAAYARFLLEWHGLRPPTPGSGAPGGAGPGGAWTNEGPPGA 1071 Query: 1136 -----------------VDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLA 1178 ++R + QL G+ LPA LWE +ILP RV Y LD+LLA Sbjct: 1072 VPPGTRPPGAALPVGSPPQALLRALRQLQGIPLPAELWEQEILPRRVPGYQPLWLDQLLA 1131 Query: 1179 TGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFA 1238 G V W G +A +L + A + +Q ++A GA F Sbjct: 1132 AGEVHWVGSPG-----KRLAFYLPDDVHAFAGRLAAAPEGLTPVQAQVLAACRAAGAAFL 1186 Query: 1239 QQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR 1298 +++R E++ EALW L W G++T+D +AP+R + RS AR S R + Sbjct: 1187 GTVARRAGLTPAEAL------EALWELAWMGLVTNDTYAPVREVLRSDRTARRSGRAAAV 1240 Query: 1299 ARRGRPVYAQPVSPRVSYNTPNLAGRW----SLLQVEPL---NDTERMLALAENMLDRYG 1351 R G GRW SLL +P +R+ A +LDRYG Sbjct: 1241 LRGG-------------------TGRWWPTGSLLAGDPPAAGQPADRVEGYARLLLDRYG 1281 Query: 1352 IISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLAT 1411 +++R+AV A++ P + + R ME G + +G FV GL G QFA ++RLR Sbjct: 1282 VVTREAVAADDGPAPWGEVLQQLRRMEWRGEVRQGYFVAGLTGVQFARADAVERLR---- 1337 Query: 1412 QATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGG 1471 A P+ ++A DPAN +G +LPWP R +V++ G+ +L + G Sbjct: 1338 GARGRTGAPPLLVNACDPANPYGTVLPWPE---GERLARVPSNYLVLADGRPVLGVEGHG 1394 Query: 1472 KKMLVWQEKEELLAPEVFHALTTALR----REPRLRFTLTEVNDLPVRQTPMFTLLREAG 1527 +++ +E E ALT L+ R R + D+PV+++P LR G Sbjct: 1395 SRLIPLVPLKEDRLAEALAALTGLLKAPGAARLRRRIEVRRWGDMPVQKSPAAEPLRALG 1454 Query: 1528 FSSSPQGL 1535 F SP+GL Sbjct: 1455 FEPSPRGL 1462 >UniRef50_C0E805 Putative uncharacterized protein n=2 Tax=Corynebacterium matruchotii RepID=C0E805_9CORY Length = 1759 Score = 1254 bits (3246), Expect = 0.0, Method: Composition-based stats. Identities = 562/1355 (41%), Positives = 786/1355 (58%), Gaps = 91/1355 (6%) Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV + +S A+ + SIWP+IE + ++ H+ST+VF NSR +AEKLTA Sbjct: 389 PVVSGATSASGAANLDVPVASDTTTSIWPHIEQHLYATIMAHQSTLVFVNSRRIAEKLTA 448 Query: 311 RLNELYAARLQRSPSI------------------------AVDAAHFESTSGATSNRVQS 346 +LNEL+A R + A + S+ + + Sbjct: 449 KLNELHAHACARDRAAGAHGGDDTDGADTWLARQAPPIPPAASRGQPPADMMKPSDEIVT 508 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 + IAR+HHGSV++E+RA TE LK G ++ VVATSSLELGIDMGA+DLV+Q+ +P SV Sbjct: 509 APRDIARAHHGSVAQEERARTETLLKEGLIKAVVATSSLELGIDMGAIDLVVQIESPPSV 568 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 ASGLQR+GRAGH VG S G+F+P+ R DLV++AV V+ M AG +E + P N LDVL Q Sbjct: 569 ASGLQRVGRAGHIVGAASTGIFYPKHRADLVNTAVTVQRMRAGLIEEIRIPTNALDVLLQ 628 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 T+AA ++ V++W+ V RA P+ +L R VFDA +++ SG YPS DF+ RP+++++ Sbjct: 629 HTIAAVSVADWDVEQWFETVTRAYPYHNLDREVFDAVINLASGSYPSTDFAELRPRIIYD 688 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVND 586 R TG L+ARPGAQ +AVTSGGTI DRGM+ V L G E G+RRVGELDEEMVYESRV D Sbjct: 689 RITGTLSARPGAQRIAVTSGGTIADRGMFGVFLLGGGE--GARRVGELDEEMVYESRVGD 746 Query: 587 IITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--- 643 + TLGA+SWRI++ITRDQV+VTPAPG S RLPFW G+ GRPAEL +G+F +A Sbjct: 747 VFTLGASSWRIEEITRDQVLVTPAPGSSGRLPFWLGDQVGRPAELSRAVGEFRRAVAQSL 806 Query: 644 -----DGAFFSGTIPPW----LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEI 694 +GA +E NI+ I EQR+ TGIVP + L++ER RDE+ Sbjct: 807 AVESAEGAGEKPNAESEHIFDGLDEWASDNIRRFISEQRDVTGIVPDEKTLLVERFRDEV 866 Query: 695 GDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAI 754 GDWR++LHSPYGR V+ WA+A+ +I + G DA V+ DDGIV R+P++D +P A + Sbjct: 867 GDWRVVLHSPYGRGVNAAWALAVGAKISSDMGIDAQPVSGDDGIVLRLPESD-VVPGAGL 925 Query: 755 FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEI 814 F +P+ + IV E VG+SALFAARFRECAAR LL+P PG R PLWQQR RA+QLL++ Sbjct: 926 FQIDPDDIADIVAEQVGNSALFAARFRECAARGLLLPRHNPGKRAPLWQQRQRAAQLLDV 985 Query: 815 AQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGY 874 A+ YP+FP+ILE +RECLQDVYDLPAL +L + G ++I++V T PSPFA ++LF Y Sbjct: 986 ARKYPNFPIILEAVRECLQDVYDLPALVQLCEDIKGMRVRIAEVETMQPSPFAVAMLFTY 1045 Query: 875 VAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRR 934 F+Y++D+PLAE+RA+ L+LD +LL LLG V+ +LLDP +I V+ L+R+AP RR Sbjct: 1046 TGAFIYETDSPLAEKRAAALALDPKLLAKLLGSVELRDLLDPDIIADVDARLRRIAPDRR 1105 Query: 935 AKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACM 994 A+ E L D LR LGP+ + DL V ++ + L +R+ I+G E LA + Sbjct: 1106 ARTGEELIDALRILGPIPIADLPHHML-----VDAFRIDDLDRQRVMRVRIAGVEHLAQV 1160 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 DA LRD LG+ +P + V L L R+ R + F L ++ Sbjct: 1161 SDAPLLRDGLGIPVPPGVAAP-TALVPDALEQLASRWCRTRGPFLLADMVAAFGLAPSVA 1219 Query: 1055 EEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 L L + GL++ + + +V+ +V + +R RSL AAR T+PV+ + YAR L Sbjct: 1220 HNLLSGLVDTGLIIVGHYRHGVDEPEYVAADVLKLIRSRSLAAARAQTQPVSHSAYARFL 1279 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 ++ G+ P S G D + V EQLAGV LPAS WE+ ILP+RV DY Sbjct: 1280 IDWHGISPIKTTGQPRHDSLDVG-----DEIYAVCEQLAGVRLPASAWETLILPSRVHDY 1334 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVA 1228 + L +L G + G G +D V L EYAA+ P E + S ++I Sbjct: 1335 NPADLQQLCHDGDIRIVGAGLAGTNDPWVLLLPAEYAAD-LVPVEVEPPTLSPAARSIYD 1393 Query: 1229 VLAD--GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSS 1286 +++ GG + + ++ D +A + ALW L G+++ D +APL A Sbjct: 1394 MMSGSPGGGFLFDSLVDQVG-------DPAATRAALWELFDCGLVSPDSFAPLAARLAQG 1446 Query: 1287 SNARTSTR--RSHRARRGRP----------VYAQPVSPRVSYNTPNLAGRWSLLQVEPLN 1334 A ++R R R GRP + + + P++ GRW L + ++ Sbjct: 1447 KTAHRTSRTPARSRLRAGRPGRPGRQGRMGRIGRGYAGVIHQTPPDMTGRWGLSPIPTVD 1506 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 T R +AL E LDRYG+++R A+ AEN+ GGF + S E+SG+ +RG F+ LG Sbjct: 1507 PTSRSVALGEAWLDRYGVVTRGAIQAENVLGGFALAYKVLSSFEESGKALRGHFITDLGA 1566 Query: 1395 AQFAERLTIDRLRDLA------TQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVP 1448 AQFA IDRLR A + T ++A DPAN +G LPWP P Sbjct: 1567 AQFATAAVIDRLRGFADTDDVTGWPSGTSEPNVCVIAACDPANPYGAALPWPG--DGKSP 1624 Query: 1449 TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK-----EELLAPEVFHALTTALRREPRLR 1503 +R AGALVV++ G + +L +GGK + + EE + V AL+ A+ + R Sbjct: 1625 SRAAGALVVLADGLPVAHLTRGGKTLTWFLPPRAEISEETIIRLVVQALSGAVGKNLTTR 1684 Query: 1504 FTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 T+ ++N PV ++P + R AG +P GL G Sbjct: 1685 ITIEKLNGKPVHESPHLEVFRTAGARLTPSGLRIG 1719 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 98/193 (50%), Positives = 130/193 (67%) Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + +ILYISP+KALGTDV+ NL+ PL GI R G ++ V +R+ Sbjct: 137 NTQANTQTDAPAGVKILYISPLKALGTDVELNLRAPLTGINHTAARLGIHHPDITVAVRS 196 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDT A ER+ RNPPDILITTPES YL+LTS+A L V T+I+DE+HA+AG+KRG H Sbjct: 197 GDTTAAERAAHIRNPPDILITTPESAYLILTSKAATILSTVTTIIVDEIHAIAGTKRGVH 256 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 LAL+LERL+ L+ QRIGLSATVR +A FLGG PVT+++PPA + + +VVPV Sbjct: 257 LALTLERLEHLVEKPLQRIGLSATVRPHETIARFLGGRHPVTIIDPPATKTWDLSVVVPV 316 Query: 253 ANMDDVSSVASGT 265 +M D+ + G+ Sbjct: 317 PDMSDLPAPELGS 329 Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 45/85 (52%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P+P + D FSP WF F PT VQ W + E+ALV+APTGSGKTLAAFL+ Sbjct: 7 PEPEDHILDKFSPHIATWFRDVFAHPTPVQTAAWSAISAGENALVVAPTGSGKTLAAFLW 66 Query: 65 ALDRLFREGGEDTREAHKRKTSRIL 89 AL+ L G+ T L Sbjct: 67 ALNTLATAPGQTRLPVVNPTTKTSL 91 >UniRef50_C6MZM9 DEAD/DEAH box helicase-like protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZM9_9GAMM Length = 1403 Score = 1170 bits (3026), Expect = 0.0, Method: Composition-based stats. Identities = 466/1490 (31%), Positives = 697/1490 (46%), Gaps = 170/1490 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 P + WF PT Q Q W ++ L+ APTGSGKT AAFL +D+L R+ Sbjct: 9 WAHPIVQQWFFEQIGSPTEPQIQGWPQILSGQNTLISAPTGSGKTFAAFLACIDQLVRKA 68 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 T + +LYISP+KALG DVQ+NL PL I +++G ++ V +RTG Sbjct: 69 ISGTLANE----TEVLYISPLKALGNDVQKNLMGPLNEIVKVAKKQGLAMADINVMVRTG 124 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT +ER + + PP IL+TTPESLY++LT ++RE LR V+TVI+DE+HA+A KRGAH Sbjct: 125 DTSPKERQAMLKQPPHILVTTPESLYILLTAGKSREILRTVKTVIVDEIHALADDKRGAH 184 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVT--VVNPPAMRHPQIRIVV 250 LALSLERL+ L RIGLSAT + VA FL G+ +++ +H ++ + V Sbjct: 185 LALSLERLEVLTSFPPLRIGLSATQKPLDVVANFLVGNNRAAPAMIDIGHAKHLELAVEV 244 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P++ + V+S IW I I ++RST++F N+R +AE+ Sbjct: 245 PISELGAVAS--------------NQIWDEIYNRIAQLAEQNRSTLIFANTRRVAERAAH 290 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L E L +HHGS+SK+ R E Sbjct: 291 HLGERLGKDL-------------------------------VVAHHGSLSKKLRLEAETK 319 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+GEL+ +VAT+SLELGID+G+VDLV Q+ +P S+A LQR+GRAGH G +SKG F Sbjct: 320 LKNGELKALVATASLELGIDIGSVDLVCQLGSPRSIAVMLQRVGRAGHWHGAISKGRIFA 379 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 TR +L++ A IV + G L+ L PH P+D+LAQQ VA A + +D+ + VR A Sbjct: 380 TTRDELLECAAIVNAIQDGDLDQLVIPHEPIDILAQQIVATCATEDWLIDDLFLLVRHAF 439 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 +KDL R FDA ++ML+ +G + L ++R G+L R G++L+A+TSGG+IP Sbjct: 440 HYKDLSREQFDAVINMLAEGI-AGSRGRYGAYLFYDRVHGMLKGRRGSRLVAITSGGSIP 498 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI--TRDQVIVT 608 D G+++V A S VG LDE+ ES D+I LG+TSW+I +I T+ QVIV Sbjct: 499 DNGLFTVKTE-----APSIVVGTLDEDFAVESNRGDVILLGSTSWKINRIESTKGQVIVE 553 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT----IPPWLAEE----- 659 A G +PFW GE R AEL + + LL+ + + WL Sbjct: 554 DAHGAPPSVPFWLGEAPERTAELSLRVSNLRELLSSKLTAAEESIANVQQWLGAYCKVDV 613 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 N I + + R G VP ++ ER DE G ++++HSP+G R+++ W +A+ Sbjct: 614 NGARQIIDYLLQGRALLGAVPTQERIIAERFFDESGGMQLVIHSPFGARINKAWGLALRK 673 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + + A+D+GI + + +IV AV S LF R Sbjct: 674 CFCRSFNVELQASATDNGINIALTEQHSFPLADVFNYLSAVTAKEIVVHAVLQSPLFPTR 733 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFPVI 824 +R A RAL + GH+ P R+RA LL PD P+I Sbjct: 734 WRWAACRALALVRFRNGHKVPPNILRMRAEDLLAAVFPDAVACQDNVNIDDVKLPDHPLI 793 Query: 825 LETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDA 884 E ++ L + ++ L L++++ EIQ V T TPS FA LL F+ DA Sbjct: 794 NEAMKNALMEALNVEGLLVLLKKIKNKEIQCIAVDTPTPSVFAHELLNANPYAFL--DDA 851 Query: 885 PLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDL 944 PL ERRA + + L N++ ++ LDP+VI++V Q+ P + + L DL Sbjct: 852 PLEERRARAVEMRRTLPANMVAELGN---LDPEVIKEV---RQQAWPD--VRNADELQDL 903 Query: 945 LRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDAL 1004 L+ + + A + SS YL+ L+A R A + Q ++ A Sbjct: 904 LQTV--LAFPAHAATYHESSRRWQVYLDELVAAGRAGTATLGNQLFWFAVEKAKTF---S 958 Query: 1005 GVRLPESLPEIYLHRVSYPLRD------LFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL 1058 + L + L + PL L +L T L+ LG + +E L Sbjct: 959 AIYPEAQLNQSLLDVEAIPLDRDEGIVYLLRGWLFHLGPTTVLALSQFLVLGESEIEHVL 1018 Query: 1059 QQLREQGLVMNL-----QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQG 1113 +L GL++ W + R+ +L R+ PV T + LL Q Sbjct: 1019 LRLEAMGLILRGVFEGNASQEWCERRLLARIHRLTLAKLRQEIEPVTPTQFVHWLLTWQH 1078 Query: 1114 VLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEML 1173 V P T G G++ VIEQL G +PA WE I RV++Y +L Sbjct: 1079 VAPGTQ-------------LSGEQGLLAVIEQLQGFEIPAKAWEPHIFAKRVKNYDPMLL 1125 Query: 1174 DELLATGAVIWSG--------------QKKLGEDDGLVALHLQEYAAESFTPAEADQ--- 1216 D+L G + W ++ + L+E ++ + + Sbjct: 1126 DKLCLMGIIGWGRLSSTLTHADTFIDSKRVTPTSIAPITFFLRENSSWLIEVKDGVKEDI 1185 Query: 1217 -ANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDI 1275 A S + + + L GA F I +R E ++ LW LV G+ ++D+ Sbjct: 1186 LAGLSHIAKDVYLYLLKNGASFFMDIVDGVRHLKSE------VEMGLWELVAVGLTSADL 1239 Query: 1276 WAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLN- 1334 + LR+L RR R + +GRW LL+ + Sbjct: 1240 FDNLRSLIDPRRRLMKKRRRVVRHQYS-------------------SGRWFLLKKSLHSF 1280 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 ++E++ AL +L RYG++ R ++ E + + R++E+ G I GRFVEG G Sbjct: 1281 NSEQIEALCWVLLKRYGVVFRDLLVREKNIPRWRELHAAFRTLEERGEIRGGRFVEGFLG 1340 Query: 1395 AQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPA 1444 QFA ++ LR + + ++++A DP NV G +LP P A Sbjct: 1341 EQFALPYAVESLRAMKHKEIGDEQ---ISIAAVDPLNVSGFILPGPRVSA 1387 >UniRef50_A6CAB6 DEAD/DEAH box helicase-like protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAB6_9PLAN Length = 1532 Score = 1129 bits (2919), Expect = 0.0, Method: Composition-based stats. Identities = 459/1612 (28%), Positives = 711/1612 (44%), Gaps = 226/1612 (14%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 + P WF + F+ PT Q Q W R EH L+ APTGSGKTL AFL +DRL + Sbjct: 6 YHPIIEKWFRKRFQGPTEPQQQGWPCINRGEHTLISAPTGSGKTLTAFLSVIDRLVKR-- 63 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP++AL D+ RNL+ PL+ I+ GE +R+G+RTGD Sbjct: 64 --SLAGDLDDETSVIYVSPLRALSNDMHRNLEQPLEEISQLLEEAGEIFTPIRIGLRTGD 121 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP+ +R+ L + PP IL+TTPESLYLMLT S+ARETL+ VETVI+DE+HA+ KRG+H Sbjct: 122 TPSSKRAALVKRPPHILVTTPESLYLMLTGSKARETLKTVETVIVDEIHALLRDKRGSHW 181 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP-VTVVNPPAMRH-----PQIR 247 +++LERL+AL+ QRIGLSAT + VA +L G RP + + P + Q Sbjct: 182 SITLERLEALVEHPLQRIGLSATQKPLDRVAQYLVGHRPEIEITANPPSKEQSEFPEQTC 241 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 +V + + + + A W + I++ + HRST++F N+R LAE+ Sbjct: 242 RIVNIGHSRTLDVAIQVPPSELSAICSHEQWAEVLEQIIELINSHRSTLIFVNTRRLAER 301 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 +T +L E + SHHGS+S + R T Sbjct: 302 ITHQLTERLGEE-------------------------------VVGSHHGSLSAKIRHRT 330 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 EQ LKSGEL+ V+AT+SLELGID+G +DLV+Q+ +P +A+ LQRIGR+GH +G V KG Sbjct: 331 EQKLKSGELKAVIATASLELGIDVGYIDLVVQIGSPRGIATFLQRIGRSGHSLGLVPKGR 390 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F +R +LV+S +V + G L+ + P P+D+LAQQ A A DE + + Sbjct: 391 IFALSRDELVESMALVRSIKQGILDTVRMPEAPIDILAQQITAEVACQEWNTDELFDTLT 450 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 RA +++L R+ FD+T+ LS S + R L ++ + +R A+L++ +GG Sbjct: 451 RAYSYRNLKRKDFDSTIQFLSEGISSTSGRS-RVYLHHDQVQNRVRSRKNARLVSTMNGG 509 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 IP+ Y V+ E + VG +DEE ES DI LG TSW+++ + V V Sbjct: 510 AIPEIASYRVVTEEDQT-----VVGSVDEEFAVESMAGDIFLLGNTSWQVRYVRGGDVTV 564 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAE-----ENTI 662 A G +PFW GE GR EL I L + WL++ E Sbjct: 565 VDAHGAPPSIPFWFGEAPGRSLELSTEISHLRKELERRIEDTERAILWLSQETNTDEWGS 624 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 I + Q+ A G+VP + +V ER DE G ++++H+P+G ++ W + R Sbjct: 625 KQIVEYFQAQKAALGVVPTQKRIVFERFFDESGGMQLVIHAPFGGDINRAWGYTMRKRFC 684 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 + + A D+GI+ + ++ + + Q+ +A+ +F R+R Sbjct: 685 RSYNFELQATADDNGIILSLGPQHSFPLESLFSMLNTRNVQQLSEQAILDHPMFHVRWRW 744 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLL----------------EIAQGYPDFPVILE 826 RALL+ G + P QR RA LL EI + PD ++ + Sbjct: 745 NVTRALLVSRMQNGKKVPPPLQRFRAEDLLTAVFPRLTGCPENEIGEIVR--PDHILVDQ 802 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 TL +CL + D+ L+ ++ ++ G +++ T PSPF LL F+ +A Sbjct: 803 TLYDCLNEQLDIEGLKNVLLKIEQGSVKLIPRDTREPSPFCYELLNSSPYTFLDGGEA-- 860 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 ERRA ++ L + + L P+ I QV +E Q + + + D+L Sbjct: 861 QERRARAVATRHTLSVESVEDLG---RLSPEAIAQVCQEAQPV-----VRNADEFHDVLL 912 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPA-------------MISGQERL-A 992 + V + E + + + L A R ERL A Sbjct: 913 GRIHLPVNE--------RPEWSDWYQELEATGRATTLSRTVSGPDQKTAHSWVATERLPA 964 Query: 993 CMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIA 1052 + + A V +P + + + + + L T +LA++ + A Sbjct: 965 ALAAFPESQHAPHVNVPAGVQQDW--ESTEARTSIIRGLLDNCGPQTVAELANQAGMTDA 1022 Query: 1053 IVEEQLQQLREQGLVMNL----------------------------QQDIWVSDEVFRRL 1084 E L L +G+ M W + R+ Sbjct: 1023 QTEAALMALEGEGIAMQGYFRIKDPNWDQSLDESGTTESKKEASPAPPKEWCHRRLLSRI 1082 Query: 1085 RLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIE 1144 +LQ R +PV + + L G+ T G +G+ V+ Sbjct: 1083 HRLTLQGLRAQVQPVDVSVLIQYLTRLHGL-------------TEDEKRSGTNGLFEVLS 1129 Query: 1145 QLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGE------------ 1192 L G+ +PA WE ILPAR+ +Y S LDEL TG V W Sbjct: 1130 MLQGIDIPAICWERDILPARLSNYQSSHLDELCFTGEVGWGRLYPPRRTADQGKAMTSIT 1189 Query: 1193 DDGLVALHLQEYAAES---------FTPAEADQANRSALQQAIVAVLADGGAWFAQQISQ 1243 + V+ L+E +EA+ + S+ Q + +L GA FA + Sbjct: 1190 RNAPVSFFLREDIPWLACFNQVSSNLEDSEAEH-HLSSPAQEVQELLTQRGALFASDLMA 1248 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT--RSSSNARTSTRRSHRARR 1301 + S + ++L L+ +G++TSD ++ +R T R S N R+S + R Sbjct: 1249 TTQSL------PSQIADSLGELISRGLVTSDSFSGMRQFTEDRISKNRRSSRKSRIGLVR 1302 Query: 1302 GRPVYAQPVSPRVSYNTPNLAGRWSL--------LQVEPLNDTERMLALAENMLDRYGII 1353 R +TPN GRWS+ ++ L E + A ++ R+G++ Sbjct: 1303 KR-------------STPNNTGRWSIWRRESSEEVEERSLQYFEYVEQWAWQLIRRWGVV 1349 Query: 1354 SRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQA 1413 R + E+ + + + R +E G I GRFV G+ G QFA TI LR L Sbjct: 1350 FRDLLSKESGAPRWFELLQIYRRLEARGEIRGGRFVTGVAGEQFAMSGTIQELRKLRDAP 1409 Query: 1414 TQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKK 1473 + LSA DP N+ G L PAT PT R +A Sbjct: 1410 SS---DELTILSATDPLNLTGILTKDARVPAT--PTNR---------------IAYRNGN 1449 Query: 1474 MLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLRE 1525 ++ W + EEL + ++ L+RE L F LP+++ L E Sbjct: 1450 LIAWAKNEELF---LLTKVSEKLKRELILGF------GLPIQEFNRQQTLEE 1492 >UniRef50_Q4K580 Lhr n=14 Tax=Proteobacteria RepID=Q4K580_PSEF5 Length = 1474 Score = 1123 bits (2905), Expect = 0.0, Method: Composition-based stats. Identities = 458/1532 (29%), Positives = 690/1532 (45%), Gaps = 162/1532 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F PA WF F T Q + W + A+ L+ APTGSGKTL AFL +D L R+ Sbjct: 58 DGFHPAVSAWFKHTFAAVTPAQARAWPLIAQRRSTLIAAPTGSGKTLTAFLAVIDDLVRQ 117 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++Y+SP+KAL D+Q NLQ PL GI ++ RR G E+++ +RT Sbjct: 118 GLAGG--GQLPDATLVVYVSPLKALSNDIQINLQQPLAGITEQLRRMGLPELSISTAVRT 175 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP ++R+ + ++ P IL+TTPESLY++L S R L +VIIDE+HA+AGSKRG+ Sbjct: 176 GDTPQKDRNAMRKSAPQILVTTPESLYVLLGSDSGRRMLASTRSVIIDEIHALAGSKRGS 235 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVV 250 HLALSLERL AL RIGLSAT + V+ FL G RP +V+ R + I V Sbjct: 236 HLALSLERLQALCAAPLLRIGLSATQKPIEAVSRFLVGHGRPCEIVDIGHARPRDLDIEV 295 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + V + +W + + + HR+T++F N+R LAE+L Sbjct: 296 PPVPLSAVMA--------------NDVWELVYERLANLAREHRTTLIFVNTRRLAERLAR 341 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L+E + +HHGS++KEQR EQ Sbjct: 342 HLSERLGKQ-------------------------------AVAAHHGSLAKEQRLEAEQR 370 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+G+L+ ++AT+SLELGID+G VDLV Q+ +P S+++ LQR+GR+GHQVGG KG F Sbjct: 371 LKAGDLQVLIATASLELGIDIGDVDLVCQIGSPRSISAFLQRVGRSGHQVGGTPKGRLFA 430 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 TR DL++ A +++C+ G L+ L PH PLDVLAQQ VA + +R+AA Sbjct: 431 LTRDDLIECAALLDCVRRGELDTLLIPHAPLDVLAQQIVAEVSCQEWSEAALLDMLRQAA 490 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+ DL + + A L ML+ + +G L + L R GAQL A+TSGGTIP Sbjct: 491 PYADLDQAHYQALLQMLAEGF-NGRQGLRSAYLHRDALARTLRGRRGAQLTALTSGGTIP 549 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 D YSVLL +G ++E+ ES D+ LG TS+RI ++ +V V A Sbjct: 550 DNADYSVLLEPQ-----GLNIGSVNEDFAVESIAGDVFQLGNTSYRILRVETGKVRVEDA 604 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD---------GAFFSGTIPPWLAEENT 661 G+ +PFW GE GR AEL + L L + A + Sbjct: 605 QGQPPNIPFWLGEAPGRSAELSSAVARLLAQLDELLGATPGQLQAAIHWLHHELGLNLAS 664 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + + R A G +P L++ER DE G ++++HSP+G R++ W +A+ R Sbjct: 665 AEQLVDYLAPARLALGALPSQDTLIMERFFDESGGTQLVIHSPFGSRINRAWGLALRKRF 724 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + + AS+D IV + + D I+ +A+ + LF R+R Sbjct: 725 CRTFNFELQAAASEDAIVLSLSTSHSFALDEVWRYLHSNSAEHILVQALLDAPLFGVRWR 784 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILET 827 A AL +P + G + P QR+++ L+ + PD P++ +T Sbjct: 785 WNAGVALALPRYSGGRKVPPQIQRMKSEDLIASVFPDQIACLENLAGEREIPDHPLVEQT 844 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 L +CL + D L+RR+ G++++ PSP A +L + + DAPL Sbjct: 845 LDDCLHEAMDSEGWLNLLRRMEQGQVRLLSRELPAPSPLAAEIL--SAKPYTFLDDAPLE 902 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 ERR + L R DP D + + + + L Sbjct: 903 ERRTQAV-----LARRW---SDPQATDDLGALDAEAIAAVAAEAWPAPASADEMHEALMS 954 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMIS-GQERLACMDDAARLRDALG- 1005 L ++ + +L+ L + R G ++ LR Sbjct: 955 LACISEAEAQANLH-----WPEWLQALSSQGRACRLQAGPGGGLWLALERICCLRALYPQ 1009 Query: 1006 VRLPESLPEI----YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQL 1061 L +L + L +L L A +T Q+A L + + + L QL Sbjct: 1010 AALQPALQPVPGFDQAWEAQPALVELIRARLSGFAPLTLAQIAAPLGLPASSIHQALIQL 1069 Query: 1062 REQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVL 1115 +G V+ ++ W + R+ +++ R PVA + R L + Q + Sbjct: 1070 ESEGYVLRGRFSPGGDEEQWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQHLS 1129 Query: 1116 PATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDE 1175 P T G G + ++ Q G AS W+S +LPAR++DYS+ LD+ Sbjct: 1130 PGTQGQ-------------GSAMLAELVAQFEGYPAAASAWDSDLLPARLKDYSASWLDD 1176 Query: 1176 LLATGAVIWSGQKKLG-------EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVA 1228 L +G V+WS G +V L A + D ++ S Q + A Sbjct: 1177 LCRSGKVVWSRINSSGKIAASALRSTPIVLLPRARVALWNALTCPIDSSDLSPKAQKVHA 1236 Query: 1229 VLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 VL+ GA F ++ Q + S L+ L LV G + +D +A LRAL + Sbjct: 1237 VLSQLGALFFDELLQEA------HLLRSELETVLQELVGAGWVNADSFAGLRALITPA-- 1288 Query: 1289 ARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL-QVEPLNDTERMLALAENML 1347 S R++ +RRGR + + AGRW+LL + + + +A +L Sbjct: 1289 ---SKRQNRSSRRGRGAFV---------GGMDDAGRWALLRRAASEDSAATLEHVAMTLL 1336 Query: 1348 DRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL 1406 RYG++ + + E + + + +E G I GRFV GL G QFA I L Sbjct: 1337 RRYGVVFWRLLEREADWLPNWRDLLRTFHRLEARGEIRGGRFVSGLAGEQFALPEAIPLL 1396 Query: 1407 RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLY 1466 R++ + + +A+ DP N+ G LLP P PA +G +V G Sbjct: 1397 REVRRRP---HDGSLIAVCGVDPLNLAGTLLPGPKVPAL------SGNRLVFRDGLPAA- 1446 Query: 1467 LAQGGKKMLVWQEKEELLAPEVFHALTTALRR 1498 A G +W E L P+ AL L R Sbjct: 1447 -ADIGGTQHLWLE----LEPQAAQALRNKLIR 1473 >UniRef50_Q13M86 ATP-dependent helicase, DEAD/DEAH family n=5 Tax=Burkholderia RepID=Q13M86_BURXL Length = 1510 Score = 1121 bits (2899), Expect = 0.0, Method: Composition-based stats. Identities = 469/1569 (29%), Positives = 684/1569 (43%), Gaps = 189/1569 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F PA WFL+ F PT Q W R LV APTGSGKTL AFL ALD L ++ Sbjct: 47 DDFHPAVASWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQ 106 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++Y+SP+KAL D++ NLQ+PL+GIA E RG +++R +RT Sbjct: 107 GLAAG--GALPDETLVVYVSPLKALSNDIRLNLQLPLQGIAAELEARGLPALDIRTAVRT 164 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT QER+ L + P IL+TTPESLY++L S R L V TVI+DE+HA+AGSKRG+ Sbjct: 165 GDTTQQERNALKKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGSKRGS 224 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 HLALSLERLDAL RIGLSAT + S VA FL G + P +V Sbjct: 225 HLALSLERLDALCQRRLPRIGLSATQKPVSAVARFLVGGASID------SGIPADCAIVD 278 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 V ++ + A +W + + + V HR+T++F N+R +AE+ Sbjct: 279 VGHVRERDLALEIPPVPLEAVMPNEVWERVYDRLAELVAMHRTTLIFVNTRRMAERAARH 338 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L E +HHGS+++E R EQ L Sbjct: 339 LTERLGKE-------------------------------AVAAHHGSLAREHRFDAEQRL 367 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GH VGG+ KG FP Sbjct: 368 KRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHHVGGMPKGRLFPA 427 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 +R DL++ A +++C+ G L+ L P PLDVLAQQ VA + D + +RRAAP Sbjct: 428 SRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWSEDALFDMMRRAAP 487 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 + DL R +DA L ML Y S + L + +G L R G +L+AVTSGGTIP+ Sbjct: 488 YADLTREQYDAVLRMLVEGYTSRN-GPRGAYLHRDVLSGTLRGRRGGKLVAVTSGGTIPE 546 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+L +G ++E+ ES D+ LG S+RI +I +V V A Sbjct: 547 NADYAVVLEPQAIN-----IGTVNEDFAVESLAGDVFQLGNASYRILRIESGRVRVEDAQ 601 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------------------------- 644 G+ +PFW GE GR EL + + Sbjct: 602 GQPPNIPFWLGEAPGRSDELSFGVARLREQIGRLLDGKDPAMPATVANATGTEVQAEEIT 661 Query: 645 ------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 +E I + R A ++P LV+ER DE G + Sbjct: 662 TLPVRLDHATQWLTDNLGLDEAAARQIVDYLARARAALSVLPTQNTLVMERFFDESGGTQ 721 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE 758 +++H+P+G RV+ W +A+ R + + A++D IV + + + D Sbjct: 722 LVIHAPFGSRVNRAWGLALRKRFCRTFNFELQAAATEDAIVLSLTGSHSFVLDEVWRYLH 781 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--- 815 ++ +A+ + LF R+R A AL +P T G +T QR+R+ LL Sbjct: 782 SNSAEHLLIQALLDAPLFGVRWRWNATTALGLPRYTGGRKTAPQLQRMRSEDLLASVFPE 841 Query: 816 -----------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPS 864 + P P++ +T+ +CL + D L+RR+ GE+Q+ PS Sbjct: 842 QAACLENVVGERELPHHPLVDQTVDDCLHEAMDSERWLALLRRIEQGEVQLVARDLPAPS 901 Query: 865 PFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEE 924 P A +L + Y DAP+ ERR + + D LD I V + Sbjct: 902 PLAAEIL--NAKPYAYLDDAPIEERRTQAVLNRRWTDPS---SADDLGALDAGAIESVRD 956 Query: 925 ELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAM 984 + +A+ + + + L L +T + E ++L +L R Sbjct: 957 DAW-----PQARNADEMHEALTGLACITDTEARHH-----EGWPAWLASLAESGRATRLQ 1006 Query: 985 ISGQ-------ERLACMDDAARLRDALGVRLPESLPEIYLHR--VSYPLRDLFLRYLRAH 1035 I+ ERL C + L P + P+ Y L D+ L Sbjct: 1007 IADDAGVWLPIERLTCFES---LYPEARFSPPLAAPKGYTDSWNADDALLDVLRARLTGF 1063 Query: 1036 ALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSL 1089 + A +A L A VE+ L +L +G VM ++ W + R+ ++ Sbjct: 1064 GPLPASAIAAALKLPAASVEQSLMRLEAEGYVMRGRFTPQAAEEEWCERHLLARIHRYTV 1123 Query: 1090 QAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGV 1149 + R PV + R L E Q + P T EG D + V+EQL G Sbjct: 1124 KRLRREIEPVERHDFMRFLFEWQHLTPDTRS-------------EGRDALAAVLEQLEGF 1170 Query: 1150 GLPASLWESQILPARVRDYSSEMLDELLATGAVIWS-------GQKKLGEDDGLVALHLQ 1202 A WE ILPARV+ Y++ LDEL G ++W+ G +V L Sbjct: 1171 QAAAGAWEEDILPARVKAYANTSLDELCRAGKIVWTRLTERARGTAGPVRSTPIVLLPRA 1230 Query: 1203 EYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEAL 1262 S + Q SA Q++ VLA GA F ++ +R V L+ AL Sbjct: 1231 RVRVWSALLDPSKQPELSARAQSVYDVLAQHGAMFFDELLTEVR------VLRMELESAL 1284 Query: 1263 WALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLA 1322 LV G++ SD +A LRAL + + R + S RAR + A Sbjct: 1285 GELVAAGLVNSDSFAGLRALLKPVA-KRNAFSGSRRARSS-----------ALIGGMDDA 1332 Query: 1323 GRWSLLQVEPLNDTERM------------LALAENMLDRYGIISRQAVIAE-NIPGGFPS 1369 GRW+L+ E +A +L RYG++ + + E + + Sbjct: 1333 GRWALVSRPATAAAEVAPERRRQLPPDVLEHVAMTLLRRYGVVFWRLLEREADWLPPWRD 1392 Query: 1370 MQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDP 1429 + + + +E G I GRFV GL G QFA I LR++ A V ++ DP Sbjct: 1393 LLRVFQRLEARGVIRGGRFVNGLAGEQFALPEAIPVLREVRRHANDGAF---VCVAGTDP 1449 Query: 1430 ANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVF 1489 N+ G LL PA AG ++ G ++ L G + E + Sbjct: 1450 LNLAGTLLVGERVPA------VAGNRILYRDGIVVATLVAG---TFWFGPALEAVPSARE 1500 Query: 1490 HALTTALRR 1498 A RR Sbjct: 1501 QARAWLARR 1509 >UniRef50_Q2SEQ3 Lhr-like helicase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEQ3_HAHCH Length = 1472 Score = 1118 bits (2892), Expect = 0.0, Method: Composition-based stats. Identities = 476/1535 (31%), Positives = 728/1535 (47%), Gaps = 110/1535 (7%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF PT +Q + W A EH L+ APTGSGKTL AFL+AL+R Sbjct: 7 LFHPLIAEWFAANLGAPTDIQSKAWPRIASGEHCLITAPTGSGKTLTAFLWALNRFATGE 66 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + R +RILYISP+KAL D++ NL PL + R+GE +R R+G Sbjct: 67 LQPGR-------TRILYISPLKALNNDIRNNLSRPLAELTACFERKGEPFPLIRAQTRSG 119 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL-RGVETVIIDEVHAVAGSKRGAH 192 DTP+ ER ++ R PP+ILITTPESL L+L+S++ +L + ++TVIIDE H++ G KRGA+ Sbjct: 120 DTPSGERRQMLRQPPEILITTPESLNLLLSSQSGLSLLQDLDTVIIDEAHSLLGVKRGAY 179 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR----I 248 L ++ERL L QRI LSAT+ S A F+ G + V P R+PQ R Sbjct: 180 LISAVERLVDLSG-EFQRIALSATINPVSAAADFVAG-YELDVRQPDYARNPQYRKRPVT 237 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 +V + +H + +W + +L + +R+T++FTN+R L EKL Sbjct: 238 LVESHAAKHYRLSVNYPAAIAHRSADKHLWDALAETLLTRIQANRATLIFTNNRALCEKL 297 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 T ++N Q++D +A +HHGS+S+E R E Sbjct: 298 TYKIN-------------------------------QAADAMVAYAHHGSLSREIRTEVE 326 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + LK GEL +VATSSLE+GID+GA+D V+ V T SVA+ +QR+GRAGH VG VS G Sbjct: 327 RRLKGGELAAIVATSSLEMGIDIGALDEVVLVQTAGSVAAAIQRVGRAGHNVGDVSVGSL 386 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP +D ++SAV+ + + LE + P PLDVLAQ ++ + +DE Y+ +R Sbjct: 387 FPTHPQDFLESAVLAKAIMEKDLEPVRPLQCPLDVLAQVIISMTGVATWDLDELYAHLRM 446 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 ++ + +L RR FD +DML+GRY + ++ +R +TARPGA L SGG Sbjct: 447 SSVYHNLSRRQFDLLIDMLAGRYAESRIRELQARVSVDRIDNAITARPGALLSLYQSGGV 506 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPDRG + + + S R+GELDEE V+E+++ TLGA W+IQ+IT + V V Sbjct: 507 IPDRGYFHLR-----HQDSSARIGELDEEFVWEAKIGQSFTLGAQFWQIQKITHNDVFVL 561 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP----PWLAEENTIAN 664 PA ++ PFW+ E R E IG FL L + + + Sbjct: 562 PAKAGASTPPFWKAESISRNFHFSEQIGLFLEHLDANLDAPDIVATLQSQYYMTAEVADS 621 Query: 665 IQGLIEEQRNATG-IVPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHEPWAVAIAGR 720 + + QR TG +P HL++E +G +++LH+ +G V+ PW +A+ Sbjct: 622 LLDFLRRQRAHTGRPLPHRHHLLVEIVDSILGHSHGRQMVLHTGWGAEVNRPWGMALEAA 681 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + V S++ IV ++P + DA + L PE++ ++R + S F ARF Sbjct: 682 WLESFSEQPVVYVSNECIVLQMP--EEIPVDAILSLVSPERIEALLRARLEGSGFFGARF 739 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RECA RALL+ R PLW RL++ +LL Y DFP++LET R CLQD +DL A Sbjct: 740 RECAGRALLLSKGKFNERRPLWMSRLQSQKLLNSVLKYEDFPILLETWRTCLQDEFDLTA 799 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 L++L+ L +IQ S T TPSP A ++ + V +MY+ D P +++ + +L +L Sbjct: 800 LKQLLEELQTEQIQWSVANTRTPSPMAQNIAWEQVNLYMYKDDTPTSDKTS---NLSEDL 856 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 LR LL + ++ ++ ++ ++ QRLAPG L D ++E G + + R Sbjct: 857 LRELLYNDELRPTVNAELCQRFVQKRQRLAPGYAPDSARDLLDWIKERGAIPDSE--WRE 914 Query: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 E S E L + I ER AR A + PE Sbjct: 915 LLFCIESESGNETLQDMLSATETKIIRLERRNAQVIVARENQASFAQ--AFYPEADADAE 972 Query: 1021 SYPLRD-LFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDE 1079 S L D L +LR + V+A +++ + ++ L L E ++ + + Sbjct: 973 SDALFDTLLGEWLRFYGPVSATEISLWLGVDPQRLQRALDDLVEARAIV--AGPLIEGNA 1030 Query: 1080 VFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGV 1139 R + + R AA +A L LE+ + + P + + Sbjct: 1031 ELRYCDRENFEILLHMARKEAAPEFAPLPLEQLPLFLHCWQTLTCERDDDPH-----ERL 1085 Query: 1140 MRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVAL 1199 ++++L G PA+LWE++ILPAR+ DY+ +LD L + W G ++G Sbjct: 1086 FDIVQRLQGTPAPAALWENEILPARLPDYNPALLDHLFQESDLEWLGV-----EEGKTLF 1140 Query: 1200 HLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGE--SVDLSA 1257 PA ++ L+ A F S+ + +D + Sbjct: 1141 CFAADLDLLDAPAPLNEEAAEDLR-----------ALFPDVDSRYDFQALSGKSGLDNTT 1189 Query: 1258 LQEALWALVWQGVITSDIWAPLR-----ALTRSSSNARTSTRRSHRARRGRPVYAQPVSP 1312 L E LW VW+ I +D +A LR T + ++S R R R R +AQ Sbjct: 1190 LTERLWDWVWKQRINNDAFAALRRGVENKFTIPNLPTQSSGRPPSRRRAMRHSFAQSKQA 1249 Query: 1313 RVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQT 1372 S T RW L Q +P+ + ER A +L RYG++ R+ + E + ++ Sbjct: 1250 ANSPGT-WRQVRWPLRQDDPITEQERGKDRARLLLSRYGVVFRELLQRELPEMRWSAVFR 1308 Query: 1373 LCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANV 1432 R ME S I+ G F + + G QF + L+ L QTR Y L+A DPA++ Sbjct: 1309 SLRLMELSREIIGGYFFKDIPGPQFITP---NALQMLQNGLPQTRLY---WLNATDPASL 1362 Query: 1433 WGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL 1492 G L +P R + G +L++ + GK++ + + L Sbjct: 1363 CGLGLTGLKQ---KLPKRLDSIHMSFMGPELIMVARRNGKQLDIMIPPDHPDLDACLAPL 1419 Query: 1493 TTALRR--EPRLRFTLTEVNDLPVRQTPMFTLLRE 1525 + L R +P L +N +P L Sbjct: 1420 SNLLHRSCQPLKSINLDTINGEKAVDSPYLPHLSR 1454 >UniRef50_C8W110 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=C8W110_DESAS Length = 1502 Score = 1110 bits (2872), Expect = 0.0, Method: Composition-based stats. Identities = 479/1587 (30%), Positives = 737/1587 (46%), Gaps = 163/1587 (10%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P R WF +PT +Q Q W + EH L+ APTGSGKTL AFL+AL +L Sbjct: 8 LFHPLIRKWFAEKVGEPTDIQIQAWPRITKGEHVLITAPTGSGKTLTAFLWALQKLITGD 67 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R R+LY+SP+KAL DVQRNL PL+ + GE ++V R+G Sbjct: 68 WPLGR-------VRVLYVSPLKALNNDVQRNLLQPLQELRAYFAEAGELFPPIQVLTRSG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAH 192 DTP ER ++ R PP+ILITTPESL L+L+S+ R L GVETVI+DE+HAV +KRG H Sbjct: 121 DTPQNERRQMLRKPPEILITTPESLNLLLSSKNNRLILSGVETVILDEIHAVLDNKRGTH 180 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 L +++RL LL QRI LSATVR VA F+GG + + R+ + +V+ Sbjct: 181 LITAVDRLV-LLAGEFQRIALSATVRPLEPVAEFVGGFKACR--DGEDCRYQKRPLVILR 237 Query: 253 ANMDDVSSVASGTGEDSHAGRE----GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + ++ E ++ G E ++W + + + + +T+VF N+R EKL Sbjct: 238 SAAKKHYNLIVDAIERNNGGAEEVEQDALWQALAAVLTKVIKENIATLVFCNNRRAVEKL 297 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 + +N+ L SHHGS++KE R E Sbjct: 298 SRYINDAAGESL-------------------------------VYSHHGSLAKELRLTVE 326 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 Q LK+GEL+ +VAT+SLELGID+G +D VI V TP S+ + +QRIGRAGH VG VS+G+ Sbjct: 327 QKLKNGELKGIVATNSLELGIDIGKLDTVILVQTPPSLTAAIQRIGRAGHSVGQVSRGIL 386 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP RD V++AV+ + A +E +TP PLDVLAQ ++ A++ DE Y+ ++ Sbjct: 387 FPICGRDFVEAAVVSRSLPAVEIELITPIEAPLDVLAQVLLSMTAVETWDADELYAFLKT 446 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + P+++L R+ +D L+ML+GRY +P+++W++ + AR G L GGT Sbjct: 447 SYPYRNLSRKSYDLLLEMLAGRYADTRLRELKPRIIWDKLDRTIKARDGVARLVYLGGGT 506 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPDRG Y + L + + K +GELDEE V+E V + LG W+I IT + V V Sbjct: 507 IPDRGYYDLRLLDTKAK-----IGELDEEFVWERSVGETFMLGTQVWKIMCITHNDVEVI 561 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIAN 664 P +PFWR E R E IG FL L +F + P + Sbjct: 562 PGAQTINIIPFWRAEEQNRDFFYSEKIGLFLEEAEQNLKTDSFAHQLVTPNTWSVYAVER 621 Query: 665 IQGLIEEQRNATG-IVPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHEPWAVAIAGR 720 + ++ Q+ A G +P H+++E D + ++I+H+ +G +V+ P+A+ +A Sbjct: 622 LIEFLKRQKEAAGQPLPHRHHILIEHFADPLNTADSKQVIVHTLWGGKVNRPFAMGLAAA 681 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 +G + S++ I+ +P L P+ L +R + SS F A+F Sbjct: 682 WEQKFGYPLEIYVSNNSIMLMLP--HSFALQELFSLVSPQNLEDFLRGKLESSGFFGAKF 739 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RE A ALL+P R PLW RLRA +L Y DFP+++ET R CL+D +DL Sbjct: 740 RENAGTALLLPRVNFKKRMPLWLNRLRAKKLQAAVSSYADFPIMIETWRTCLKDEFDLDM 799 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 +++L+ +N G I+IS+ T PSPFA+ +++ ++MY+ D P ++R++ L EL Sbjct: 800 VKQLLDEINDGRIKISETVTHQPSPFASDVIWRQTNKYMYEDDTPFSDRQS---GLSGEL 856 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 L+ L+ + ++RQ+ +L+R APG E L ++E + ++ A Sbjct: 857 LKELVYSPHLRPEIPEALVRQLNGKLKRTAPGYAPTDGEELLLWIKERLFIPADEAASLF 916 Query: 961 TGSSEEV--ASYLENLLAVKRIFPAMI-------SGQERLACMDDAARLRDALGV----- 1006 ++ A + L +KR + + Q L ++ R+ LG Sbjct: 917 AAMERDLQSADHKLTLEKIKRTLGDKLAWLHLPGAEQPGLCALEILPRIVACLGAVFSDL 976 Query: 1007 RLPESLPEIYL---------------HRVSYP------LRDL---FLRYLRAHALVTAEQ 1042 L +P+ + P + D ++L + V + Sbjct: 977 VLHPLIPQAVSQMSAGLSKVAALFEQETAAEPGEFGGDVTDTALFVSQWLSYYGPVPRDF 1036 Query: 1043 LAHEFSLGIAIVEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREAT 1096 ++ L + + L L ++ ++ + E RL + +A R+ Sbjct: 1037 VSRCLGLPVNVSAAVLAILLKEECIVADVFTQEAGEAEVCERENLERLFAMARRARRQED 1096 Query: 1097 RPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLW 1156 +P+ T L QGV+ ++ + +EQL G+ A LW Sbjct: 1097 KPLPVTALPLFLATYQGVVEKGTN---------------MEDLQARLEQLFGLISQAQLW 1141 Query: 1157 ESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQ 1216 E ILPAR+ Y + +D L+ T ++W G+ + V L+E E F PAE Q Sbjct: 1142 EEAILPARLETYYTSWMDSLMQTSDLVWFGRG-----NKRVVFCLRE-DLELFPPAEEGQ 1195 Query: 1217 ANRSALQQAIVAVLADG-GAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDI 1275 +Q + D G + +S+ + L + LW VWQG I +D Sbjct: 1196 GPEDKVQAR--DLFPDPLGKYDFFTLSRH------TGLPSDDLTQRLWRHVWQGNIANDS 1247 Query: 1276 WAPL-RALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQV---- 1330 +A L R L + + + R G R S + P L G W L Sbjct: 1248 FAVLRRGLLTKFTPLQVEGKHGFGRRSG--------YSRWSASRP-LQGNWYALSECEEK 1298 Query: 1331 EPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVE 1390 +P+ E + + RYG++ R+ + E + + R ME SG I G F Sbjct: 1299 DPIEREELVKERIRQLFSRYGVLFRELIQQELPEMQWRRIFRTLRLMEFSGEIYAGHFFA 1358 Query: 1391 GLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTR 1450 + G QFA R R L + Y L+A DPA+ G LP +PTR Sbjct: 1359 QIIGLQFASREA---NRLLHKGLNEKSIY---WLNAADPASPCGLKLPGLDED---LPTR 1409 Query: 1451 RAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE--PRLRFTLTE 1508 A VV G +L L + GK++L+ ++ PE F T L RE P + Sbjct: 1410 LATNFVVFHGTRLKLVAKRNGKELLIKAGPDDASLPEYFAFCKTLLTREFNPLKSIVVES 1469 Query: 1509 VNDLPVRQTPMFTLLREAGFSSSPQGL 1535 +N P ++P L+ GF +GL Sbjct: 1470 INGRPALESPYKKALQGIGFIGEYKGL 1496 >UniRef50_Q1IK30 DEAD/DEAH box helicase-like n=3 Tax=Bacteria RepID=Q1IK30_ACIBL Length = 1435 Score = 1108 bits (2867), Expect = 0.0, Method: Composition-based stats. Identities = 456/1543 (29%), Positives = 686/1543 (44%), Gaps = 190/1543 (12%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 N P SL P ++WF++ F PT Q W L+ APTGSGKTLAAF Sbjct: 2 GNAVPESL--QWAHPLVQEWFVQKFGTPTEPQVAGWPQILAGRTTLIAAPTGSGKTLAAF 59 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L +D+L R+ R + ++YISP+KALG D+Q+NL++PL I RG Sbjct: 60 LACIDQLVRKA----LNGELRDCTEVVYISPLKALGNDIQKNLEVPLGEIMQMAGERGIL 115 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEV 181 +R +RTGDT A ER K+ R PP IL+TTPESLY++LT R+R+ LR V TVI+DE+ Sbjct: 116 LPQIRTAVRTGDTLASERIKMLRLPPHILVTTPESLYILLTADRSRQNLRHVRTVIVDEI 175 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPP 239 HAVA KRGAHL +SLERLD L T RIGLSAT + +A FL G +V+ Sbjct: 176 HAVADDKRGAHLTISLERLDKLAITPPTRIGLSATQKPIEQIAHFLTGSGRPDPAIVDVG 235 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 R I I VP + V+S +W I + D V +HRSTI+F Sbjct: 236 HRRQLDIAIEVPNTELGPVAS--------------NEMWDEIYQRLADLVNQHRSTIIFV 281 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R L+E+L L E+ +HHGS+ Sbjct: 282 NTRRLSERLCLHLAEILGEEN-------------------------------VAAHHGSL 310 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 S++ R E LK+GE++ +VAT+SLELGID+G VDLV Q+++P S+A LQRIGRAGH Sbjct: 311 SRKLRHAAETKLKNGEVKALVATASLELGIDVGFVDLVCQISSPRSIAVALQRIGRAGHW 370 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 G + KG F TR +LV+ A + + G L+ + P PLD+LAQQ VAA + + Sbjct: 371 RGAIPKGRIFATTRDELVECAAGIRAIHQGDLDRIIIPEAPLDILAQQIVAACSAEECDE 430 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 DE + VRRA P++DL R+ ++ L MLS + + + +R L AR GA+ Sbjct: 431 DEMFDLVRRAYPYRDLDRKQYEEILAMLSEGIAAKR-GRYGAYIHHDRVNRKLRARRGAR 489 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 L A+TSGG IP+ +++V+L VG +DE+ ES +I LG TSW+I++ Sbjct: 490 LAAITSGGAIPETALFTVVLEPE-----GVVVGTVDEDFAVESMAGEIFLLGNTSWKIRR 544 Query: 600 ITRD--QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD------------- 644 I + +++V A G+ +PFWRGE R AEL + + + L+++ Sbjct: 545 IEGNVGRILVEDAHGQPPGVPFWRGEAPARTAELSQHVSELRRLVSEMTPTTKPLHKEEV 604 Query: 645 ----------------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLE 688 ++ I I R G VP + ++ E Sbjct: 605 AGESRRIRGITPTAEVTQAIEWLQRECGVCQSGAEQIIEHIVTGRAVLGDVPTQQTIIAE 664 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 R DE G ++I+H+P+G R+++ W +A+ R + + A+DDG+ + + Sbjct: 665 RFFDEGGGMQLIIHAPFGGRINKAWGLALRKRFCRSFNFELQAAATDDGLNIALAEQHSF 724 Query: 749 LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA 808 +PE L +I+ +A +S +F R+R A R+L + G + P QR+R+ Sbjct: 725 PLSDVFQFLQPETLPEILEQAALASPIFKTRWRWDANRSLALLRFQNGKKVPPQIQRIRS 784 Query: 809 SQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 LL PD P+I E +++ L + DL L +L+ L G ++ Sbjct: 785 DDLLASVFPDVAACFENIEGDIKVPDHPLIKEVMKDTLHEAMDLDGLMQLVSNLRDGTVK 844 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 V T PS F+ +L F+ DAPL ERRA +S+ L ++L +V L Sbjct: 845 TLAVDTPVPSVFSHEILNANPYAFL--DDAPLEERRARAVSMRRVLPDSVLEEVG---RL 899 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL 974 D I+QV EE + + + L D+L L + E + + + E L Sbjct: 900 DRAAIQQVCEEAR-----PDVRDADELHDMLHTL-VVVPEFIDLPGWRQNAAWQQFFERL 953 Query: 975 LAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHR---VSYPLRDLFLRY 1031 R F A + A +S V + + Sbjct: 954 RESNRAFVAEADSARYWVAAERARLFAKIFPTASWDSAVPTLDESDINVDDAVLAAATGW 1013 Query: 1032 LRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL------QQDIWVSDEVFRRLR 1085 + VT L +E+ +L G ++ + W + R+ Sbjct: 1014 MMHAGPVTTSTLGTTLGAPQPEIEKAFLRLEASGTILRGKFTGDSTETEWCERRLLARIH 1073 Query: 1086 LRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQ 1145 ++ R+A PV+ + R LL Q V T G G++ V++Q Sbjct: 1074 RLTVATLRKAIEPVSQAQFMRWLLRWQHVAEGTQTF-------------GERGLLEVVQQ 1120 Query: 1146 LAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK---------------L 1190 L G +PAS WE ++L RVR Y + LD L TGAV W + Sbjct: 1121 LQGFEIPASSWEREVLSRRVRQYDPQWLDALSLTGAVGWGRLSPHPATLEDSSQGTRRIV 1180 Query: 1191 GEDDGLVALHLQEYAAESFTPAEADQAN--RSALQQAIVAVLADGGAWFAQQISQRIRDK 1248 + ++E A E +Q S + + + +L GA F I + + Sbjct: 1181 PTSVAPITFFVREDADWMVPRREEEQLERVLSPIGKQVFDLLRKRGACFFADIVRSVGCA 1240 Query: 1249 IGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQ 1308 E+ + LW LV G++T+D + LR+L + +RS R R Sbjct: 1241 KAEA------ETGLWELVAAGLVTADGFDNLRSLIDPKRRSGPGGQRSARPR-------- 1286 Query: 1309 PVSPRVSYNTPNLAGRWSLL-QVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGF 1367 + +GRW +L ++ + + + A+ +L RYG++ R + E+ + Sbjct: 1287 -----------HTSGRWCVLHPLDSVAPEKSVEAVCRMLLRRYGVVFRDLLTRESNLPRW 1335 Query: 1368 PSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSAN 1427 +Q R +ED G I GRFV G G QFA ++ LR L V +SA Sbjct: 1336 RELQIAFRRLEDRGEIRGGRFVAGFLGEQFALPQAVESLRALRNLPANGE---TVTVSAA 1392 Query: 1428 DPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQG 1470 DP N+ G ++P PA + V G L + Sbjct: 1393 DPLNLVGIIVPGERIPAIGYRS------VTYRDGVPLAEEHRQ 1429 >UniRef50_C8RVX4 ATP-dependent DNA helicase (Fragment) n=2 Tax=Corynebacterium jeikeium RepID=C8RVX4_CORJE Length = 1398 Score = 1107 bits (2862), Expect = 0.0, Method: Composition-based stats. Identities = 573/1415 (40%), Positives = 769/1415 (54%), Gaps = 141/1415 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F WF F +PT VQ Q W + ++ALV+APTGSGKTLAAFL++L RL Sbjct: 7 DSFYAPVAAWFRDVFAEPTIVQTQAWRAISAGQNALVVAPTGSGKTLAAFLWSLSRLSGG 66 Query: 73 GG-EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 D K +++LYISP+KALG DV RNL PL GIA GET +RVG+R Sbjct: 67 SFFNDAPTPEKSSPTKVLYISPLKALGVDVSRNLAAPLAGIARVADAMGETAAPVRVGVR 126 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGA 191 +GDTP ERSKL RNPP+IL+TTPESLYLMLTS+A TL V+TVI+DEVHAVAG+KRG Sbjct: 127 SGDTPQSERSKLLRNPPEILVTTPESLYLMLTSKAAATLANVDTVIVDEVHAVAGTKRGT 186 Query: 192 HLALSLERLDALLHTSAQRIGLSATVR------------------SASDVAAF-LGGDRP 232 HLALSLERL+ L + QRIGLSATV + ++ + Sbjct: 187 HLALSLERLEMLTGRAVQRIGLSATVNPVDKVASFLGGDRPVTVVNPEQPKSWDVQVTSV 246 Query: 233 VTVVNPP------------------AMRHPQIRIVVPVANMDDV---------------- 258 V P A +V A +D+ Sbjct: 247 VEDFQDPPAVEDVALAEYEVAESEAASEKETEEALVDGAPVDEALLGPSLIGEGVGGSTQ 306 Query: 259 ----SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + VASG ++S ++ S+WP+++ I +V+ +RST+VF NSR AE+LT LNE Sbjct: 307 VGSGARVASGVDKESALPQQKSVWPHVQRAIYRQVMENRSTLVFVNSRRAAERLTGALNE 366 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 +A A + +AR+HHGSVSK++RA E ALKSG Sbjct: 367 EWAKEHDPDALAAPTRRDPAQMMAQSGAVRGMDGAGVARAHHGSVSKDERADIEAALKSG 426 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELRCVVATSSLELGIDMG VD V+QV P SVA+ +QR GRAGH VG S +P ++ Sbjct: 427 ELRCVVATSSLELGIDMGLVDHVVQVGAPPSVAAAVQRCGRAGHNVGATSHATIYPLHKQ 486 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM------------DALQVDEW 482 D + V+V+ + G LE L HN LDVLAQQTVAA AL V+EW Sbjct: 487 DAEAAVVVVDRLLKGELEPLHVVHNALDVLAQQTVAATVQAGAGGTSGADGTGALDVEEW 546 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + VRRA P+ LPR FD ++M+SGRYPS DF+ + + +++ G L ARPGAQ LA Sbjct: 547 WRVVRRAHPYATLPREAFDGVIEMISGRYPSTDFADLKARAIYDPVAGTLEARPGAQRLA 606 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 VTSGGTIPDRGM+ V L GE G+RRVGELDEEMVYESRV D+ TLGA+SWRI +I R Sbjct: 607 VTSGGTIPDRGMFGVFLAAGEN-DGARRVGELDEEMVYESRVGDVFTLGASSWRILEINR 665 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 DQVIV PA G + RLPFW G+ GRP ELG+ IG+ G +L T Sbjct: 666 DQVIVAPAAGHTGRLPFWVGDAAGRPVELGKAIGENRRTWGSGTLADIRSADFLDAH-TR 724 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 AN+ +EQ+ GI+P R +++ER RD+IGDWR+++H+P+GR V+ PWA+A+ ++ Sbjct: 725 ANLDAYYQEQKETAGIIPDERTVLIERFRDDIGDWRVVVHTPFGRGVNAPWALALGAELN 784 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFE-------PEKLLQIVREAVGSSAL 775 G DA VA DDG+V R+P +D + P + L E E L V E VGSSAL Sbjct: 785 RRTGIDAMAVAGDDGMVLRLPYSD-EPPGMELLLGEGYSGAERAEATLADVMEEVGSSAL 843 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 FAARFRE AARALL+P R PG R PLWQQR RA+QLL++A+ +P+FPV++ET+REC+ DV Sbjct: 844 FAARFRESAARALLLPRRNPGKRQPLWQQRQRAAQLLDVAREHPEFPVMVETMRECVHDV 903 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 Y+L L+ L+ L +++++VTT PS FA SLLF Y + FMY+ D+ RA+ L+ Sbjct: 904 YNLDFLKALVANLGQRGVRLAEVTTEAPSAFAESLLFTYTSAFMYEGDSAE---RAAALA 960 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVED 955 +D LL +LG + G +LDP +R+V + Q LA GR+A E D+LR LGP++++ Sbjct: 961 VDPALLAKVLGTREEGMVLDPTAVRRVVDAAQWLAEGRQAASVEQAVDMLRALGPLSLDG 1020 Query: 956 LAQRHTGSSEEVASYLENLL--AVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL- 1012 + +R + V LE L R+ GQ +L ++D LRD LGV +P + Sbjct: 1021 VRERIEPWAGTVEDSLEQLRELVPTRLIEVHFGGQLKLGAVEDMPLLRDGLGVPVPPGVA 1080 Query: 1013 -PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL------------Q 1059 + +V + L LR+++ TA + A EF LG A + L Q Sbjct: 1081 IAAEQVDQVDNAIDQLLLRWMKNRGPTTAAEAAAEFGLGRATSDALLARWAGGVQGTGKQ 1140 Query: 1060 QLREQGLVMNLQ-----------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 + G ++LQ + +V + RRLR +L AAR + PV TYA+ L Sbjct: 1141 RRLSAGHFVDLQAETQHTETQHTETQYVDTGMLRRLRSATLAAARGSLEPVTQQTYAQFL 1200 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 + G+ + + +EQLAGV +PAS WE+ +LPAR+ DY Sbjct: 1201 ADWHGLGQMQR-----------------EELASALEQLAGVPIPASAWETLVLPARIPDY 1243 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQAN--------RS 1220 LDELL+TG ++ G + G D + A E + Sbjct: 1244 QPGDLDELLSTGEILAVGSGQAGAKDAWLCFIPAGMAEYLLEGGEGLERGVHKETVTTLG 1303 Query: 1221 ALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLR 1280 + I+ L GGA+ A ++ D + ALW L G++ D +A +R Sbjct: 1304 MVATQILEHLQRGGAFLAAELQSV------TGADPEEVDAALWELFDAGLVAPDSFAAVR 1357 Query: 1281 ALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVS 1315 A + R+ R +GR + R Sbjct: 1358 ARLAEAGPTGKQAHRAPRRNQGRGSARRVRMGRSG 1392 >UniRef50_A3ZQS6 DEAD/DEAH box helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQS6_9PLAN Length = 1467 Score = 1104 bits (2855), Expect = 0.0, Method: Composition-based stats. Identities = 440/1582 (27%), Positives = 683/1582 (43%), Gaps = 223/1582 (14%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 ++ D F P R+WF F +PT Q Q W A + L+ APTGSGKTLAAF+ LDRL Sbjct: 1 MILDQFHPIVREWFQTKFGEPTDAQAQGWPSIAGRRNTLIAAPTGSGKTLAAFMVCLDRL 60 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 FR R + ++Y+SP+KAL D+QRNL PL+ I + RRG +R Sbjct: 61 FRR----WMAGSLRDATYVVYVSPLKALSNDIQRNLDTPLEEICNLAERRGILPPQIRTA 116 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSK 188 +RTGDTP+ ER K+ R PP IL+TTPESLYL+LT +AR+TL+ V+TVI+DE+HA+A K Sbjct: 117 VRTGDTPSSERQKMVRRPPHILVTTPESLYLILTAPKARQTLQHVDTVIVDEIHALARDK 176 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP--------VTVVNPPA 240 RG+HL L+LERL+A+ H RIGLSAT + ++AAFL G +V+ Sbjct: 177 RGSHLTLTLERLNAVCHERPVRIGLSATQKPIEEIAAFLVGAPHAEESEATRCEIVDAGH 236 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 R +++VVP ++ V S W + +++ + HRST+VF N Sbjct: 237 RRDLDLQVVVPPTPLEAVCS--------------NEQWAEVYEQLIELIQSHRSTLVFVN 282 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R +AE++ RL E + SHHGS+S Sbjct: 283 TRRMAERVAHRLTEALGEE-------------------------------VITSHHGSLS 311 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 K+ R EQ LK+G+L+ +VAT+SLE+GID+G +DLV+Q+ + S+A+ LQR+GR+GH + Sbjct: 312 KDIRHSAEQRLKAGQLKAIVATASLEMGIDIGYIDLVVQIGSSRSIANFLQRVGRSGHSL 371 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 KG P TR +L++ ++ + G L+ + P PLD+LAQQ VA A + Sbjct: 372 RATPKGRLMPLTRDELIECCALMRAIGKGVLDKIEIPEKPLDILAQQIVAEVAAEDRDET 431 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 E + RRA P+++L R+ +D+ L++L+ L + G+L AR GA++ Sbjct: 432 ELFHLFRRAYPYRNLQRKEYDSVLEILNRGLTRS--IKNGAYLHRDPINGMLKARRGARI 489 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 A TSGG IPD Y V+ + VG +DE+ ES D+ LG TSWRI + Sbjct: 490 AACTSGGAIPDTAQYRVVTEGEKVF-----VGSVDEDFAIESLAGDVFLLGNTSWRIAYV 544 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----------------- 643 +V+V A G+ +PFW GE GR EL I +A Sbjct: 545 RNGEVVVNDAQGQPPSIPFWFGESPGRTVELSSEISLLREEMAQRIIAADRDRSREKIQL 604 Query: 644 ---------------DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLE 688 D + LA + Q++A G+VP R +V E Sbjct: 605 PALSVGVLENSFDQLDAETVAWVESECLASRFAAMQAVRYVAAQQSAIGMVPTQRQIVFE 664 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 R DE G ++++HSP G R++ W +A R + + A DDGIV + Sbjct: 665 RFFDESGAMQLVVHSPLGTRINRAWGLAFRKRFCRSFDFELQASADDDGIVLSLGPQHSF 724 Query: 749 LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA 808 + + E +++ +A+ + +F R+R RAL + + G + P R RA Sbjct: 725 PLEDMFRMLTIESGPKLLEQALLAVPMFGVRWRWNVTRALALLRFSGGKKVPPHMLRFRA 784 Query: 809 SQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 +L A YPD P++ +TL +C+ + DL ++++ + G ++ Sbjct: 785 DDMLAAAFPDQVGCLENHGADIEYPDHPIVQQTLHDCMTEAMDLDRWKQMLIDVQEGRVE 844 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 T PSPFA + F+ APL ERR ++ L + + ++ L Sbjct: 845 FVPRDTREPSPFAHERINANPYAFL--DPAPLEERRTRAVATRRTLSTSEMKELG---KL 899 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL 974 + I V +E + + + L D+L + + + + + + L Sbjct: 900 SYEAISTVRQEAWPV-----VRDADELHDVLASMIVLP--------QTLASDWSPHFTRL 946 Query: 975 LAVKRIFP-AMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLR 1033 R G+ +++ P + + + + R++ R Sbjct: 947 AEQGRAVRYTRPGGEPLWVALENLPI----AQAVWPAGVSQPAIEVPASLQREIESHTAR 1002 Query: 1034 ---------AHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL----------QQDI 1074 +AE+L+ + L + V + L +G V+ + Sbjct: 1003 VEVIRGQVPYLGPFSAEELSSQLDLPASSVFAACEALEAEGTVLRGQFYDNPQQTQETTQ 1062 Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W + R+ ++ RE RP + TY R L+ +L S Sbjct: 1063 WCDRRLLARIHRLTISGLREQIRPASPETYLRFLVRHHDLLRKIKNS------------- 1109 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G + + +EQL G A WE +L R+ DY + LDELLA+G W + + Sbjct: 1110 GPRALRKSLEQLQGFQSAAGSWERSLLSGRMDDYDGQCLDELLASGEATWGRLRPPLPNG 1169 Query: 1195 -------------GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQI 1241 + T +A ++ L GA F Q + Sbjct: 1170 EEQKSMASLRKSLPMTIALRANLGWLLPTDHAPAEALARGNATDVLDSLKQRGALFDQDL 1229 Query: 1242 SQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARR 1301 +I + + L+EAL L G+IT D +R + R + RR Sbjct: 1230 ------RILTKLLPTHLEEALRELAALGLITCDSLVGVREMVDDVLKKRKAKRR------ 1277 Query: 1302 GRPVYAQPVSPRVSYNTPNLAGRWSLLQ--VEPLNDTERMLALAENMLDRYGIISRQAVI 1359 P GRWSL VE L+ E +L RYG++ R + Sbjct: 1278 ---------------GAPTRTGRWSLFPGIVETLSSDEHAQNWCWLLLSRYGVVFRDVLT 1322 Query: 1360 AENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHY 1419 E+ + + R ME G I GRF+ + G Q+A TI LR L + Sbjct: 1323 RESTAPPWWRLVACFRRMERRGEIRGGRFIADVAGEQYATEATIYALRKLRNDESVDDW- 1381 Query: 1420 TPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQE 1479 +A+SA DP N++G + PA +G +V+ G+++ G + Sbjct: 1382 --IAISAADPVNLFGVVTAGGRIPAI------SGNSLVIRNGQIVASKRSGKIDFHI--- 1430 Query: 1480 KEELLAPEVFHALTTALRREPR 1501 +APE H +T AL R Sbjct: 1431 ---DVAPEEVHEMTRALHAGRR 1449 >UniRef50_D2NPL8 Lhr-like helicase n=2 Tax=Rothia mucilaginosa RepID=D2NPL8_9MICC Length = 1920 Score = 1102 bits (2851), Expect = 0.0, Method: Composition-based stats. Identities = 586/1529 (38%), Positives = 795/1529 (51%), Gaps = 250/1529 (16%) Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGR-EGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P+ + +P + + + + + R E SIWP ++ I+D + +RSTIVF NSR Sbjct: 401 PKNTLTIPEEALLEGALHEKALRDTPDSERPETSIWPRVQERIVDHIENNRSTIVFVNSR 460 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 GLAEKLTA LN+++ R+ +A A E + + + +AR+HHGSVSKE Sbjct: 461 GLAEKLTAALNDIHLRRV-----LAKQAISPEDYAAGICDIAE--VPPLARAHHGSVSKE 513 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 QR + E+ALK G LRCVVATSSLELGIDMG VDLVIQVA P SVAS LQR+GRAGH+VG Sbjct: 514 QRTLIEEALKGGTLRCVVATSSLELGIDMGHVDLVIQVAAPPSVASALQRVGRAGHRVGE 573 Query: 423 VSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 +S+G F+P+ R DL+ + V + M +G LE L P NPLDVLAQQTVAA A+ + VD W Sbjct: 574 ISRGFFYPKHRGDLLGATVTLAGMRSGTLEPLAIPTNPLDVLAQQTVAACALGPISVDSW 633 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE------TGILTARP 536 Y +RR+AP+ +LPR +FD+ L+ML+GRYPS +F+ RP+++W+R +G + RP Sbjct: 634 YEALRRSAPYAELPRALFDSVLEMLAGRYPSDEFAELRPRIIWDRTPTEEAPSGSIEGRP 693 Query: 537 GAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWR 596 GAQ LAVTSGGTIPDRG++ V L +E+ G +RVGELDEEMVYESR ++ITLGA+SWR Sbjct: 694 GAQRLAVTSGGTIPDRGLFPVYLVSSDEERGPKRVGELDEEMVYESRAGEVITLGASSWR 753 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA-----DGAFFSGT 651 I++IT D V V+PAPG+ ARLPFW G+ GRP LG G F L+ D Sbjct: 754 IEEITHDAVRVSPAPGQPARLPFWHGDRMGRPYALGVQTGAFTRALSSLDATDSTAARQQ 813 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 + + + N+ + EQR +TG VP +++ER RDE+GDWR++LHSP G VH Sbjct: 814 LEQLGLDTWAVDNLLAYLREQRESTGAVPSDTRMIVERHRDELGDWRVVLHSPLGYGVHA 873 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVG 771 PWA+A+ RI +G DASV+ASDDG++ R+P + P A +FLF+P++L IV E VG Sbjct: 874 PWALAVRARIEERYGVDASVMASDDGLILRLPAMEDVPPGADLFLFDPDELEAIVTERVG 933 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 SALFA+RFRE AARALL+P R PG RTPLWQQR RA+QLL++A+ YPDFPV+LET REC Sbjct: 934 DSALFASRFRENAARALLLPRRDPGKRTPLWQQRQRAAQLLDVARKYPDFPVLLETAREC 993 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 LQDVYD+PAL ++ R L + + +V T PSPFA +LLF YVAE +Y DAP AERRA Sbjct: 994 LQDVYDVPALVQVHRSLQSRAVSMLEVETNEPSPFARTLLFEYVAEHLYDGDAPAAERRA 1053 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 + LSLD LL LLG +LLDP V+ Q ++ LQR RA G EG+ DLLR+LGP+ Sbjct: 1054 AALSLDPALLAELLGSSGLRDLLDPAVLVQTQQRLQRTGERYRACGVEGVADLLRQLGPL 1113 Query: 952 TVEDLAQRH------------------------------TGSSEEVASYLENLLAVKRIF 981 + +L+ R S E+ E L+ +R F Sbjct: 1114 SARELSLRLRSDNPPTEAPGIEHEDSENYGEEYGEEYGAHASVEQARELAEQLVRSRRAF 1173 Query: 982 PAMISG------QERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAH 1035 M + Q A ++DAARLRD LG+ +LP L V+ PL DL RY R H Sbjct: 1174 SFMGAADGSTEPQLYYAAVEDAARLRDGLGIMPAAALPAALLESVAEPLEDLVSRYARTH 1233 Query: 1036 ALVTAEQLAHEFS----LGIAIVEEQ----------------LQQLREQGLVMNLQQDIW 1075 TA+Q A FS +G+ ++ + LR G V W Sbjct: 1234 IPFTAQQAAEHFSRLTPVGVGVLTPVLQRLQQQRRLSSGEFLPEVLRASGAV----GVEW 1289 Query: 1076 VSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGV----------LPATDGSPALF 1125 V +V R +R RSL A RE PV+ Y L Q V LP A Sbjct: 1290 VDTQVLRTIRARSLAALREEIEPVSVQVYGVFLPSWQNVRSLSVRIAQTLPEASAYGAFI 1349 Query: 1126 ASTSPGVYEG-----------------------------VDGVMRVIEQLAGVGLPASLW 1156 S G + ++ I+QLAGV +PAS Sbjct: 1350 PSRRAATVVGERVAPLGSASFNPTAENGTTHASQDSTSATEDLLTAIDQLAGVRVPASAL 1409 Query: 1157 ESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGE-----DDGLVALHLQEYAAESFTP 1211 E+ ILPARV Y MLDEL+A+G V ++G +LG DG + LHL E ++ + Sbjct: 1410 ETLILPARVPGYQPHMLDELMASGRVFFTGAGQLGGGSAQKSDGWIRLHLSESSSLTLGE 1469 Query: 1212 AEADQANR-------------SALQQAIVAVLADGGAWFAQQISQRIRDKIGES------ 1252 +Q R L+ AI LA GG F + +R+ + + Sbjct: 1470 DYPEQLVRAENPELWEALQTPGTLEHAIYEALAHGG-LFVPALRERVTQLMSAAAPAGQV 1528 Query: 1253 ---VDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR----------- 1298 D + + ALW LVW G +T+D +AP+RA+ +A + R Sbjct: 1529 VTFPDAAEVSAALWRLVWSGAVTNDSFAPVRAMLAGVRSAHPTPAAPARLSRVGRRGAGR 1588 Query: 1299 -------------------------------ARRGRPVYAQPVSPRVSYNTPNLA----G 1323 R R + + + P +A G Sbjct: 1589 IAAARASMGNAMAGGYGTDGYSSGSYSAPAAGRGLRSLRGHSLRGGLHAAAPAVAPQDSG 1648 Query: 1324 RWSLLQV---EPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 R+S + EP+ T LA A+ +LDRYG+++R + E+ GGF + + + ED Sbjct: 1649 RFSRVDTLLQEPVEATVAALARADLLLDRYGVLTRGCLQVEDSAGGFSQLYRIYSAAEDR 1708 Query: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHY--------------------- 1419 + RG F+EGLG AQFA T+D LR A + Sbjct: 1709 ALVRRGYFIEGLGAAQFAAPATVDLLRSTADNLSVPASPQGFGASAYTPQRTDTEQVYGT 1768 Query: 1420 -TPVALSANDPANVWGNLLPWPAHPAT---------LVPTRRAGALVVVSGGKLLLYLAQ 1469 T L+A DPAN +G L WPA P+ P R+AGA VV+ G +LY+ + Sbjct: 1769 FTVTLLAATDPANPYGAALSWPAIPSFAHEGAGTVKHRPARKAGACVVLVDGAPVLYVER 1828 Query: 1470 GGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDL----------------- 1512 G K +L + +L AL + + ++ +VND+ Sbjct: 1829 GAKTLLAFTTDP-VLLEAAAPALARLVSAGGAEKISVEKVNDVELLGTHTLNTSAQGAAT 1887 Query: 1513 -PVRQTPMFTLLREA----GFSSSPQGLD 1536 V + P+ LR A GF ++ +GL Sbjct: 1888 GEVTEHPV-EALRAALQMQGFYATVRGLS 1915 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 138/241 (57%), Positives = 166/241 (68%), Gaps = 6/241 (2%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS RDWF F PTA Q W + L+IAPTGSGKTLAAFL++LD L RE Sbjct: 69 FSTPVRDWFRATFSAPTAAQEGAWESIRNGNNTLIIAPTGSGKTLAAFLWSLDALHRE-- 126 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 EA +RILYISP+KALG DV+RNL+ PL GI E ++ VG+R+GD Sbjct: 127 ---HEAGTAGGTRILYISPLKALGADVERNLRAPLAGITRLSGNN-TGEPSISVGVRSGD 182 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA+ER +L NPPDILITTPESLYLMLTS AR TL GV TVI+DE+H +A +KRGAHLA Sbjct: 183 TPARERRQLISNPPDILITTPESLYLMLTSAARNTLAGVTTVIVDEIHNLAATKRGAHLA 242 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 +SLERLDALL AQRIGLSATV + VA FLGG +PV +++ P + +R+ VPV + Sbjct: 243 VSLERLDALLAKPAQRIGLSATVENPEAVARFLGGIQPVKIMSRPVAKEWDLRLSVPVPD 302 Query: 255 M 255 M Sbjct: 303 M 303 >UniRef50_Q3BSA5 ATP-dependent DNA helicase Lhr n=12 Tax=Bacteria RepID=Q3BSA5_XANC5 Length = 1464 Score = 1100 bits (2845), Expect = 0.0, Method: Composition-based stats. Identities = 461/1574 (29%), Positives = 686/1574 (43%), Gaps = 182/1574 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF + F PT Q W H LV APTGSGKTL AF A+D L R+G Sbjct: 8 FHPVVAAWFAQTFAAPTPAQVAAWPAIQAGRHTLVAAPTGSGKTLTAFFAAIDALIRDGL 67 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +R++Y+SP+KAL D+ NL PL+GI G +V +R +RTGD Sbjct: 68 ANG--GALPDETRVVYVSPLKALSNDIHLNLDAPLQGIRAALVAGGLPDVPIRTAVRTGD 125 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP +ER++ R PP IL+TTPESLY++L S R +L+ V TVI+DE+HAVA KRG+HL Sbjct: 126 TPQRERAQARRTPPHILVTTPESLYVLLGSASGRASLQHVRTVIVDEIHAVASDKRGSHL 185 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL------GGDRPVTVVNPPAMRHPQIR 247 +L+LERL L+ R+GLSAT + VA FL G P +V+ R + Sbjct: 186 SLTLERLQRLVAQPITRVGLSATQKPIETVAQFLVGVDADGVPPPCEIVDIGYTRKRDLA 245 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +P + V S W + + +HR+T+VF N+R +AE+ Sbjct: 246 LALPPTPLSVVMS--------------NDQWLQVYADVAALAQQHRTTLVFVNTRRMAER 291 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L +L + +HHGS+S+E R + Sbjct: 292 AARHLGDLLGKQR-------------------------------VSAHHGSLSRETRLLA 320 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 Q LK+G+L +VAT+SLELG+D+G VDLV Q+ +P S+A+ LQR GR+GH+VGG K Sbjct: 321 VQRLKAGDLTVLVATASLELGLDIGDVDLVCQLGSPRSIATFLQRAGRSGHKVGGTPKAR 380 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 FP+TR +LV+ A +++ + G L+ L P+DVLAQQ VA AA + D ++ VR Sbjct: 381 LFPQTRDELVECAALLDSIRRGELDALRIVTAPVDVLAQQIVAEAACEDWDEDALFALVR 440 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 RA P+ L R FD+ + ML + S L + L AR GA++ A+TSGG Sbjct: 441 RAWPFAGLSRATFDSVVRMLCDGF-STRLGPRAGYLHRDAVHRRLHARRGARMTALTSGG 499 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIP+ G YSV+L EK +G ++E+ ES D+ LG S+RI ++ +V V Sbjct: 500 TIPETGDYSVVLEPQAEK-----IGTVNEDFAVESLTGDVFQLGNASYRILRVEAGRVRV 554 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG-------AFFSGTIPPWLAEEN 660 A G +PFW GE GR EL + +A + Sbjct: 555 EDAKGAPPNIPFWLGEAPGRSDELSAAVSRLRGEIAARLDTAPHQSARDWLQRELEMSAE 614 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + + A G +P + LV+ER D G ++++HSPYG R++ W +A+ R Sbjct: 615 AARQLVDYLANACTALGAMPTQQCLVMERFFDASGGTQLVIHSPYGSRINRAWGLALRKR 674 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + + A++D IV + + + ++ +A+ + LF R+ Sbjct: 675 FCRTFNFELQAAATEDAIVLSLSTSHSFALEEVGRYLHSSSAEHVLIQALLDAPLFGVRW 734 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILE 826 R A A+ +P + G++ QR+++ LL + PD P++ + Sbjct: 735 RWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENLVGEREVPDHPLVAQ 794 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 TL +CL D +++R L G + + PSP A L F+ DAPL Sbjct: 795 TLEDCLHHAMDSDGWLQVLRGLESGAVTLVARDLAAPSPLAAEALNARPYAFL--DDAPL 852 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 ERR + + D LDPQ I V EE + + E + + L Sbjct: 853 EERRTQAVQSRRYTPQ----TSDDLGQLDPQAIAAVCEEAW-----PQPRDAEEMHEALV 903 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLA-VKRIFPAMISGQERLACMDDAARLRDALG 1005 LG + V + + + PA+ ER+ R A Sbjct: 904 GLGVLPVAEATDAQWQAWLAALAAAGRASCIALHGSPALWVSAERIDWF--LPLYRQA-T 960 Query: 1006 VRLPESLPE---IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLR 1062 V+ P P + + + +R+L L A L+H + A + L L+ Sbjct: 961 VQPPLQAPADCRVADWQRDWAVRELLRGRLSAVGPAQVPALSHALQVPEAEIALALAALQ 1020 Query: 1063 EQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLP 1116 +G VM Q + W + R+ +L R PV+ YAR L E Q V Sbjct: 1021 REGYVMAGQFNAHVQGEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLFEWQHV-- 1078 Query: 1117 ATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDEL 1176 S G D + V+ QL G PA LWES++LPAR+RDY LDEL Sbjct: 1079 -----------DSSSRVAGPDALAGVVGQLEGFEAPAVLWESELLPARIRDYQPAWLDEL 1127 Query: 1177 LATGAVIWSGQKKLGEDDG-------LVALHLQEYAAESFTPAEADQANRSALQQAIVAV 1229 G +W+ + G G +V L +E S +AD A S+ Q ++ V Sbjct: 1128 CTAGRTLWARLRPGGGRSGAALRSTPIVLLPRREAQHWSALARDADDAPLSSRAQRVMQV 1187 Query: 1230 LADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 L GA F +I+ + + L++AL LV +G D +A LRAL +S Sbjct: 1188 LQQQGALFFDEIADAA------HLMNTELEDALSELVMRGRAHCDSYAGLRALLVPASKR 1241 Query: 1290 RTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP--------LNDTERMLA 1341 ++ R R R S AGRW+ ++ P + + Sbjct: 1242 PSALSRQRR--------------RASALGIRDAGRWAPVRALPDLPLAEAAQRHQDTLEH 1287 Query: 1342 LAENMLDRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAER 1400 +A +L RYG++ + + E + + + + +E G I GRF+ GL G QFA Sbjct: 1288 VARTLLRRYGVVCWRLLEREAAWLPPWRELLRMYQRLEARGEIRGGRFIAGLSGEQFALP 1347 Query: 1401 LTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSG 1460 D + L Q + +SA+DP+N+ G+LLP R G V Sbjct: 1348 ---DAIAALRRARAQPLPQQWICVSASDPSNLLGSLLPGE------RVARVPGNRVASLD 1398 Query: 1461 GKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMF 1520 G + A + L + L PE L+R P Q+PM Sbjct: 1399 GLPMAVWAADRFQAL------QELTPEQAEQALRLLQRGPG-----------AAEQSPME 1441 Query: 1521 TLLRE--AGFSSSP 1532 L + AG P Sbjct: 1442 RWLAQSPAGAVPFP 1455 >UniRef50_C6CYT0 DEAD/DEAH box helicase domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CYT0_PAESJ Length = 1470 Score = 1099 bits (2843), Expect = 0.0, Method: Composition-based stats. Identities = 473/1558 (30%), Positives = 730/1558 (46%), Gaps = 141/1558 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P+ DWF +F +PT VQ Q W ++ L+ APTGSGKTLAA L LD + R Sbjct: 9 FHPSLADWFEASFGEPTDVQKQAWKAITAGDNTLIAAPTGSGKTLAAVLPCLDGIAR--- 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 ++ ++ R+LYI+P+KAL D+ +L ++ I + LR G+RTGD Sbjct: 66 --MKQQQRQAGVRLLYITPLKALNNDIHDHLVAFIEQIDKLAASSDTSWPGLRSGVRTGD 123 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T + RS + R PPDIL+TTPES+Y++LTS + RE L+ V IIDE+H +A KRG+HL Sbjct: 124 TTSSVRSAMYRKPPDILVTTPESMYILLTSEKGREMLKTVSYAIIDEIHDLAADKRGSHL 183 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH---------- 243 ++SLERL+ L QRIG+SAT + + VA FLGG + + Sbjct: 184 SVSLERLEELCGRRIQRIGVSATQKPLARVARFLGGWQEPAGSQADERQETDSEGFVHPL 243 Query: 244 ---PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P+ +V + + + ++W I + + RS I+F N Sbjct: 244 GLVPRPVTIVESHMSKKLEVSLTMPDQSQPMQTREAVWLPILDRLFALMSDCRSVIIFVN 303 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SR L E+L RLN+ + +AR+HHGS++ Sbjct: 304 SRRLCERLCLRLND-------------------------------HAGYEMARAHHGSIA 332 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 KE+R E+ LK+GELRC+VATSSLELGID+G ++LVIQ+ +P+ ASG+QRIGRAGH V Sbjct: 333 KERRLEVERMLKAGELRCIVATSSLELGIDVGHIELVIQLDSPIEAASGIQRIGRAGHAV 392 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 G S+G R R L + AV+ + + +E + P + LDVL+QQT++ A + V Sbjct: 393 GSASRGAMVARQRGVLPEMAVLGKLIAERDIEPIQIPRDRLDVLSQQTISIVASQDMAVS 452 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + + + R+ ++ P L +L+G YP RP L WNR+T +L R + Sbjct: 453 DLHRLIARSDSYRSFPAGKLRGMLQVLAGFYP-----FMRPLLDWNRDTDLLVKRRNTMI 507 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 A+T GTIP Y V + +GELDEE V ESRV D+ LG W I++I Sbjct: 508 GALTGAGTIPSSSAYPVHHVDSRVH-----LGELDEEFVQESRVGDVFQLGMNGWMIRRI 562 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG-------AFFSGTIP 653 +D+V V+ A R + +PFWR EG GR LG+ +G F+ + + Sbjct: 563 DKDRVYVSEASNRFSEIPFWRAEGLGRTYSLGKKVGAFIGEIEERLQREDEDKLIGWLTG 622 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + ++ T + LI Q + +P + +V+E RD + +I+H+P+GRR++ W Sbjct: 623 QYQMDDYTAQQLLSLIGSQLSNCE-LPTDKRIVIETYRDLMNQTHVIMHNPFGRRLNRTW 681 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 +AI + L A D+GI +P+ D P + ++ EA+ S Sbjct: 682 LLAIERQFELLLPYRLYGNAKDNGIEFVLPEWDSSWLQTIWG-VTPANVEPLLTEAITGS 740 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECL 832 L A FR A +LL+ RTPLWQ+RLR+ +LL A Y FP ++E ++ CL Sbjct: 741 PLLAIAFRHIAETSLLLSRSFS--RTPLWQKRLRSEELLRSALPYAEHFPYLMEAMKACL 798 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 + L L L+ + GEI++ T PSP AT L YV +Y+ D + Sbjct: 799 HEYLSLDDLRALLTAIQEGEIEVLVKETEYPSPMATQFLADYVNMRIYEGDGLDPAIQMQ 858 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLA-PGRRAKGEEGLFDLLRELGPM 951 ++++ EL L G+ + QV+ + E QRL+ P + + LL+ G + Sbjct: 859 LMNVSKELAGRLFGEAAIRSAIPEQVL---DAERQRLSEPELELRESSDVIRLLKRRGDL 915 Query: 952 TVEDLAQRHTGSSEEVAS--YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLP 1009 +L Q + E A LAV R + R C D+ + Sbjct: 916 APGELIQLSDTRALEWAEQLLQTGELAVYRPSQDTPEEEHRWICRDE---------REIY 966 Query: 1010 ESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEF-SLGIAIVEEQLQQLREQGLV- 1067 E+LPE + R+ T +L + L +A + + +LRE+G + Sbjct: 967 EALPES-----DEAASFIIRRFAENRIAFTELELCERYPKLSLAEAKRLIDKLREEGSLE 1021 Query: 1068 -----MNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSP 1122 ++ ++ IW S R+ S+ AR+ +P + + + RQ L Sbjct: 1022 QAPFAVSPEERIWSSRRAAERMIRLSIGEARKQVQPASPIRWCAQIALRQHALQGAQ--- 1078 Query: 1123 ALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAV 1182 G +G+ VIE+L G+ LP S WES I P+RV DY + LD L A G V Sbjct: 1079 ----------LRGSEGLKLVIERLQGIFLPLSHWESVIFPSRVTDYRKDELDLLCAAGEV 1128 Query: 1183 IWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQIS 1242 IW G+K+ E +G VA L + + P A+ +S ++ +L GA F +++ Sbjct: 1129 IWIGKKQPDEKEGKVAFFLA-GSRSIYEPYLAESREKSVSHPELLELLKRSGASFLTRLA 1187 Query: 1243 QRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT--RSSSNARTSTRRSHRAR 1300 + + + AL LVW+G ++D +APLR LT + A+T + Sbjct: 1188 RETGKL------PTEVLSALLELVWEGHASNDQFAPLRLLTLKKGKDWAKTGSGLGRWYW 1241 Query: 1301 RGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIA 1360 G P S+ +P+ + E + ++LD YGI++++ + A Sbjct: 1242 TGSLADVLPDEGSSSHTSPD------------TDPPE--MYWVRHLLDTYGIVTKE-LTA 1286 Query: 1361 ENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYT 1420 P + +Q + R +E+ G + RG F++G QF + +R T T Sbjct: 1287 SVTPYSWDRLQPVLRKLEEWGTLTRGLFIDGAITMQFTTPEVAELIRKPFPSGTPANE-T 1345 Query: 1421 PVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 LSA DPAN +G L+ WP R+ G +V+ G + L ++ GK++ + + Sbjct: 1346 LTLLSAVDPANPFGLLMEWP-EGFDCSFARKPGHFLVIRGDQWLYWMENNGKRIHTMEPR 1404 Query: 1481 EELLAP---EVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 E P E+ T LRR+ + + N V T LL+E G S + L Sbjct: 1405 EFAKQPSAEELKWIFMTLLRRQHLSKIVVERWNGETVALTDEGKLLKEIGAESDQKSL 1462 >UniRef50_D2QY58 DEAD/H associated domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY58_9PLAN Length = 1510 Score = 1084 bits (2804), Expect = 0.0, Method: Composition-based stats. Identities = 463/1593 (29%), Positives = 706/1593 (44%), Gaps = 205/1593 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F+P R WF F QP+ Q W A H LV APTGSGKTLAAFL LD+L R Sbjct: 4 EHFTPLVRQWFTARFGQPSDPQTHGWPAIAAGRHTLVAAPTGSGKTLAAFLVCLDKLVRA 63 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + T ++++++Y+SP+KAL D++RNLQ PL +++ +++G E+ +RV +RT Sbjct: 64 WQDGTLG----QSTQVVYLSPLKALSNDIERNLQQPLAELSELAKQQGLGELPIRVAVRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT +R + ++PP IL+TTPESLYL+LTS + R TL VETVI+DE+HA+A KRG+ Sbjct: 120 GDTTQSDRQSMLKHPPHILVTTPESLYLLLTSVKGRGTLTEVETVIVDEIHALARDKRGS 179 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL---GGDRPVTVVNPPAMRH----- 243 HLALSLERL A QRIGLSAT R +A FL G +P V P + Sbjct: 180 HLALSLERLAAHTSKPLQRIGLSATQRPMDAIARFLVGRGVPKPPAVAKPSRRKKKPAAQ 239 Query: 244 ---------PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 P + I V V ++ ++ S + A W + + + HRS Sbjct: 240 PLLEAQPYTPDVHI-VDVGHVRNLDLAISVPTSELAAVCSNEQWEEVYAQLSSMIQSHRS 298 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 T+VF N+R LAE+++ RL EL S Sbjct: 299 TLVFVNTRRLAERVSHRLTELLGEE-------------------------------AVAS 327 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGS+SK+ R EQ LK+G+LR +VAT+SLE+GID+G +DLV Q+ +P S+A+ LQR+G Sbjct: 328 HHGSLSKQIRLDAEQRLKAGKLRAIVATASLEMGIDIGYIDLVCQIGSPRSIATFLQRVG 387 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 R+GH +G KG FP TR +L++ +V+ + G L+ + P PLD+LAQQ +A A Sbjct: 388 RSGHNLGATPKGRLFPLTRDELLECLALVQAVRRGDLDQIEIPEKPLDILAQQIIAMVAA 447 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 + D+ ++ + RA P+ LPR FD LDM+S G S + ++ +L A Sbjct: 448 EDWNEDDLFALITRAEPYHQLPRDEFDKILDMVSNGIKQGRLSG--GYVHRDQIHKMLRA 505 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATS 594 R GA++ A+TSGG IP++G Y V++ VG +DE+ +S + +I LG S Sbjct: 506 RRGARIAAITSGGAIPEQGEYRVVVEGEGTF-----VGTVDEDFAIDSMIGNIFLLGNNS 560 Query: 595 WRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD---------- 644 W+I+QI +V+V G +P W GE GR EL + + H LA Sbjct: 561 WQIRQIKPGEVVVADVHGAPPTIPHWFGEAPGRTIELSRQLSNLRHDLASQISDQLIDIM 620 Query: 645 ------------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRD 692 + + + I Q+ A G+VP +V ER D Sbjct: 621 SRAQSDGMQCAPEDLAADVMRRCGCDAWGAEQAIRYIAAQKAALGLVPTIDKIVFERFFD 680 Query: 693 EIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDA 752 E G ++++H+ G R++ W +A+ R + + A D+G++ I D+ Sbjct: 681 ESGGMQLVIHAALGSRINRAWGLALRKRFCRSFDFELQAAADDNGVLLSIGPQHSFPIDS 740 Query: 753 AIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL 812 + P +++ +AV + +F R+R A RAL + + G R P Q+ R+ LL Sbjct: 741 LFGMLHPGNAQELLEQAVLAVPMFQIRWRWNATRALAVLRQQGGKRVPPHLQKFRSEDLL 800 Query: 813 EI--------AQGY------PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDV 858 + + PD P++ +T+ +CL + D+ ++ + G+I++ Sbjct: 801 ATTFPETVGCLENHHGDIVVPDHPLVKQTMHDCLTEAMDIVRWTSILADIKSGKIELVAR 860 Query: 859 TTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGEL--LDP 916 T PSPFA +L F+ DA L ERR +S L + D +L LDP Sbjct: 861 DTREPSPFAHQMLNARPYAFL--DDAGLEERRTRAISTRRSLSID-----DYRDLTRLDP 913 Query: 917 QVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVED----------LAQRHTGSSEE 966 + QV E + E L D L L + E+ LA+ SS + Sbjct: 914 AALAQVTREAWPT-----IRDAEELHDALTHLVLLLPEEAAPHDRLLRSLAKEGRVSSID 968 Query: 967 VASYLENLLAVKRIFPAM---ISGQERLACMDDAARLRDALG-VRLPESLPEIYLHRVSY 1022 + P + ER + L + V LPESL + Y + Sbjct: 969 YPVVKSDAEPAAAFVPGLGKAWFAAERWPVIRAVYGLTQSDPVVTLPESLEKQY--EPAD 1026 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ----------- 1071 +L ++ +TA LA L V L+ + +GLVM Sbjct: 1027 ARVELVRGRIQHSGPLTAAALAALLGLPKNQVFAALESVEAEGLVMRGNFTAIPPADSST 1086 Query: 1072 ---QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 W + R+ +L + V TY LL+ERQG+ Sbjct: 1087 TKPDVEWCERRLLSRVHRLTLDGLKRRIEAVPPETYIELLIERQGLGQNAQ--------- 1137 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 +G++GV + QLAG PA WE ++L ARV Y + LD L G +IW Sbjct: 1138 ----RQGIEGVRETVLQLAGFESPAGAWEEKLLAARVAGYDPQWLDNLFLGGELIWGRLC 1193 Query: 1189 KLGEDDGLVALHLQEYAAESFTPAE-----------ADQANRSALQQAIVAVLADGGAWF 1237 D A L + E ++ ++ +L GA F Sbjct: 1194 PPSRDAASSAAALTRAMPLTILGREDRHWMIHREVTDQPPLVTSTAAEVLRILEMKGALF 1253 Query: 1238 AQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSH 1297 ++ + + + L+EAL L G+++ D +A +R L + + TR+ Sbjct: 1254 FGELQRL------TQLLTTKLEEALAELSAMGLVSCDTFAAVRHLAGGNVRKNSRTRK-- 1305 Query: 1298 RARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQV--EPLNDTERMLALAENMLDRYGIISR 1355 + GRWSL EP + LA +L RYG++ R Sbjct: 1306 ------------------ATSSGPLGRWSLFPGALEPPAADDIALAWCRLLLRRYGVVFR 1347 Query: 1356 QAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQ 1415 + E+ + S+ + R +E G + GRF+ G+ G QFAE + RLRDL T Sbjct: 1348 DLLARESTAPNWGSIIRMFRRLELRGEVRGGRFIAGVAGEQFAEEAVVTRLRDLRDNPTT 1407 Query: 1416 TRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKML 1475 +SA DP N+ G + P PA +V+ G+ + G ++ Sbjct: 1408 D----WTIISAIDPLNLSGLVTEGPRIPAIHK------NAIVIHRGRAVAAKVSG--RIE 1455 Query: 1476 VWQEKEELLAPEVFHALTTALRREPRLRFTLTE 1508 + + LL E+ AL R + + Sbjct: 1456 FFAAVDPLLQVEMRRALQLGKRPVGPEKLHVRT 1488 >UniRef50_D0WMV8 Putative DEAD/DEAH box helicase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMV8_9ACTO Length = 1780 Score = 1084 bits (2803), Expect = 0.0, Method: Composition-based stats. Identities = 648/1614 (40%), Positives = 837/1614 (51%), Gaps = 228/1614 (14%) Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 VG+RTGDTPA+ER +L NPPDILITTPESLYLMLTS AR+TL V TVI+DE+H++AG Sbjct: 190 SVGMRTGDTPAKERRRLRVNPPDILITTPESLYLMLTSEARKTLGAVSTVIVDEIHSLAG 249 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 SKRG HLALSLERLD LL AQRIGLSATV A VA FLGG RPVT+V + P + Sbjct: 250 SKRGTHLALSLERLDGLLEEPAQRIGLSATVSPARTVADFLGGSRPVTIVEADSAASPDV 309 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + VPVA+M + + S+WP+IE ILD VLRHR+T+VF NSRG E Sbjct: 310 AVSVPVADMAAIPPASVAGQ------MVVSMWPHIERAILDHVLRHRTTVVFVNSRGACE 363 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ--------------------- 345 +LTA LNE YA R + A F ++ A + Sbjct: 364 RLTAHLNEEYANRFGGAEGSEAAADRFAGSAAAVGSVKSVEAHRQTQGRPGAGRKGLPAG 423 Query: 346 -------------------SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 IA++HHGSVSKEQR E LKSG LRCVVAT+SLE Sbjct: 424 PGAHRQSWGSGDSNYSTPPPETPVIAKAHHGSVSKEQRLAVENELKSGSLRCVVATASLE 483 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM 446 LGIDMG++DLV+QVA P SVASGLQRIGRA H VGG +G +P R LVD+AV E M Sbjct: 484 LGIDMGSIDLVLQVAPPPSVASGLQRIGRANHAVGGRPRGAIYPVERTHLVDAAVAAEGM 543 Query: 447 FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 G +E N LDVLAQQTVAA +++ D W+ VRRAAP+ LPR FD+ L++ Sbjct: 544 RTGAIEETELVANALDVLAQQTVAAVSVEETPADRWFETVRRAAPYAALPRESFDSVLEL 603 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 LSG Y S D + F P++VW+RE G+L ARPGAQ LAV+ GTIPDRGM+ V+LPEG E+A Sbjct: 604 LSGAYASADLADFSPRIVWDREAGVLRARPGAQRLAVSFSGTIPDRGMFPVVLPEGAEEA 663 Query: 567 GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE--- 623 G RRVGELDEEMVYESRV D++TLG +SW+I++I D+V+V GRS+RLPFWRGE Sbjct: 664 GRRRVGELDEEMVYESRVGDVVTLGTSSWQIREIANDRVVVDHVSGRSSRLPFWRGEGPG 723 Query: 624 -----------------------------GNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 G RPA+ E A F + Sbjct: 724 RAASAGAAKGAFLREAEASLELASSPEAAGGRRPADNPESSASVRSEPHVSASFLSRLES 783 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 +EN N+ L+ EQ+ ATG +P LVLERCRDE G WR +LHSP GRRVHEPWA Sbjct: 784 AGLDENARENLVSLLLEQKAATGAIPSDETLVLERCRDENGSWRFVLHSPMGRRVHEPWA 843 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 +AI RI + + + ASDDGI ++P T G+ P A + +F+ E+L ++V +G +A Sbjct: 844 MAIRERIRRVAKIEPQMFASDDGIAFQLPATVGRPPGAELVVFDAEELRRLVTSRIGGTA 903 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQD 834 LFAARFRECAARALL P PG RTPLW QRLRA QLLE ++ + +FPV +E RECLQD Sbjct: 904 LFAARFRECAARALLTPSSRPGRRTPLWLQRLRAGQLLEASRQFRNFPVSVEAARECLQD 963 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 VYDLPAL LM R+ ++I + T +PSPFA LLFGY F+YQ D P AERRA +L Sbjct: 964 VYDLPALAGLMERVEARSVRIVEAETASPSPFAHPLLFGYTGAFLYQEDLPRAERRAHLL 1023 Query: 895 SLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRA-KGEEGLFDLLRELGPMTV 953 SLD E + +L+G G++LD V+ +VE ELQRLAPGRR + E + DLLR LGP+T+ Sbjct: 1024 SLDPEAIASLVGDGGVGQVLDESVLAEVEAELQRLAPGRRVRRDAEAVADLLRRLGPLTL 1083 Query: 954 EDLAQRHTGSSEEVASYLE----------------------------------------- 972 E +A R G+ ++ E Sbjct: 1084 EGVAARSVGACDDAPPAQEKGDSAAREDAADAADSSQADEKQPRQESESRFPRVGEGSAR 1143 Query: 973 ------NLLAVKRIFPAMISGQERLACM-----------DDAARLRDALGVRLPESLPEI 1015 R ++ R+ + +DA LR ALGV +PE E Sbjct: 1144 DGQEEAAASEAVRSLLEELAQSRRVVSVRLGGRECWAGAEDAPALRLALGVDVPEWAAEP 1203 Query: 1016 -----YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL 1070 PL DL LR R A +TA A EF +G A E L+ L E G +M + Sbjct: 1204 GGLPCTSAVSRSPLEDLLLRCARTRARITAAAAAAEFGIGRATAAEALESLAESGSLMRI 1263 Query: 1071 QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSP 1130 W+ VF R+R RSL AR A PV RL+LER G+ Sbjct: 1264 DDAHWMEASVFARVRNRSLARARAAIEPVRPAALHRLVLERAGI---------------D 1308 Query: 1131 GVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL 1190 G+D + I + GV LPASLWES + PARV DYS MLDEL+ +G V+W Q + Sbjct: 1309 RPGRGIDALAEAISLMEGVWLPASLWESVVFPARVADYSPGMLDELILSGDVLW--QARS 1366 Query: 1191 GEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIG 1250 G + G + ES A+ A+++ + A G F S Sbjct: 1367 GGESGRASSEASRTGKESG--RLANDASQTGGEPAKTGGAPVGEIAFFPTDSPLAPVAGA 1424 Query: 1251 ESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS------------------ 1292 E LW L +G T+ + P+RA + + A Sbjct: 1425 AVSADDVGWEDLWKLAREGAATALSFEPVRACLQPRAAAPKKRRVTSRRSRRYAAFAAAR 1484 Query: 1293 --TRRSHRARRGRPVYA-QPVSPRVSYNTPN-------------LAGRWSLLQVEPLNDT 1336 + + G P QP + ++ ++P L W L+ ++ Sbjct: 1485 ALSTEAQGIDSGGPAQGTQPGNSQLRQSSPGKCPAGVERLEAAMLQTTWRRLRPPRVSAE 1544 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 E +A+ E++LDRYG++SR +A +PGG S+ + R MED+G ++RG FV GLG Q Sbjct: 1545 EAAVAMVESLLDRYGVVSRDIALAAGVPGGMASLTPVLRRMEDAGAVLRGTFVRGLGPVQ 1604 Query: 1397 FAERLTIDRLRDLATQATQTR---------HYTPVALSANDPANVWGNLLPWPAHP---- 1443 +AER T+D LR A + L DPA + G +PWP Sbjct: 1605 YAERGTLDALRSFADSPSDADVRAAGEGDSEPAAAVLDFRDPACLMGRGVPWPDPALPSQ 1664 Query: 1444 -----------ATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL 1492 P+RR G+ VV+ G+ LY + K ++ + E AL Sbjct: 1665 IGERLAAAPPVGLPDPSRRPGSAVVLVDGEPALYAPENMKALVSYT-PETAAFRSALRAL 1723 Query: 1493 TTALRR--------EPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 T LRR R R + VN + + M L EAG + P+G+ + Sbjct: 1724 TEFLRRAAARDPGIAARKRTVVESVNGVSALERAMGDALAEAGLARDPRGMRFA 1777 Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats. Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 5/109 (4%) Query: 15 FSPATRDWFLRAFKQ-PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 FS A+R WFL AF PT+VQ + W R E+ALV+APTGSGKTLAAF A+DRL R Sbjct: 14 FSRASRSWFLSAFPSGPTSVQERAWAAIGRGENALVVAPTGSGKTLAAFFSAIDRLMRRS 73 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 ED K R+LY+SP+KAL DV+RNL+ PL G+ R E+ Sbjct: 74 AEDREA----KGVRVLYVSPLKALAADVERNLRRPLAGVERAARGLRES 118 >UniRef50_B5E8L0 DEAD/H associated domain protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5E8L0_GEOBB Length = 1495 Score = 1080 bits (2793), Expect = 0.0, Method: Composition-based stats. Identities = 478/1582 (30%), Positives = 713/1582 (45%), Gaps = 161/1582 (10%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P DWF +PT VQ + W + H LV APTGSGKTLAAFL+A+++L Sbjct: 9 FHPLIADWFRETLGEPTLVQSRAWSEVMQERHVLVTAPTGSGKTLAAFLWAINQLVTGAW 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 +R+LY+SP+KAL DV+RNL PL + + ++ V R+GD Sbjct: 69 PCGE-------TRVLYVSPLKALNNDVRRNLTAPLFELRQHFAKHRVPFPDIGVMTRSGD 121 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER ++ R+PP+ILITTPESL ++LTS+ R TL GV TVI+DE+HAVAG KRG HL Sbjct: 122 TPGDERRRMLRHPPEILITTPESLNILLTSKGSRATLNGVATVILDEIHAVAGGKRGTHL 181 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ++ERL LL QRI LSATVR VA F+GG R V + P+ +V Sbjct: 182 ITAVERLV-LLSGEFQRIALSATVRPLETVADFVGGLRQVGREHV-----PRPISIVRGD 235 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 S S E +WP + + + RHRST+ F NSR EK+T +N Sbjct: 236 RGKSFSLTISAPDEAGEKRAADELWPALTARFAEIIERHRSTLFFANSRRTTEKVTRLIN 295 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 EL L A SHHGS+S+E R E+ LK Sbjct: 296 ELSGEEL-------------------------------AYSHHGSLSREIRLAVEERLKR 324 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GEL+ +VAT+SLELGID+G +D V+ + TP S++S +QRIGR+GH VG VS G+ FP Sbjct: 325 GELKAIVATNSLELGIDIGRLDSVVLIQTPRSISSAIQRIGRSGHGVGEVSSGMLFPTYG 384 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 D V +AVI + G +E + P NPLD+LAQ ++ A + Q+D+ Y ++ P++ Sbjct: 385 MDFVSAAVIARAIADGEIEEVRPVENPLDLLAQIVLSMALAETWQLDDLYDFLKGCYPYR 444 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L R+ FD + ML GRY RP+ +R ++ RP +L GGTIP+RG Sbjct: 445 NLSRQQFDLVIGMLEGRYADSHVPELRPRATVDRLEQTISTRPALSMLIYLEGGTIPERG 504 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 + + L K ++GELDEE V+E R+ D LGA W+I ++T V+V PA Sbjct: 505 YFELRL-----KESGAKIGELDEEFVWERRIGDTFALGAQVWQITEVTHSTVLVVPARKS 559 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFL----HLLADGAFFSGTIPPWLAEENTIANIQGLI 669 +PFWR E R E I FL L + + + + ++ + Sbjct: 560 QQIIPFWRAEELDRDFFYSEKIASFLQHCDERLGEPELIEELMQRHFMDRDAARALESYL 619 Query: 670 EEQRNAT-GIVPGSRHLVLERCRDEIGDW---RIILHSPYGRRVHEPWAVAIAGRIHALW 725 + Q+ +T +P HL++E+ RD +IILH+ +G V+ P+ A+ + Sbjct: 620 KLQKESTNAPLPHRHHLLIEQFRDPAAGAETEQIILHTLWGNAVNRPFTFALTAAWEKRY 679 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G ++DGI +P D + P+ + L PE + ++RE++ + F ARFRE A Sbjct: 680 GYPLQAFYNNDGIALLLPH-DLEQPEHLLELVTPENIEPLLRESMEGTGYFGARFRENAG 738 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RALL+ R PLW RLR+ +LL Y DFPV+LET R CL+D +DL L+RL+ Sbjct: 739 RALLLSRSNFKRRMPLWLNRLRSKKLLASVLRYRDFPVLLETWRSCLKDEFDLVNLKRLL 798 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 + G I ++ V TT SPFA L++ +++Y+ D RR+ +L S+L + + Sbjct: 799 EEIQDGSIYLTRVRTTKASPFAQGLIWQQTNKYVYEDDTLGGGRRS---ALGSDLPKEMA 855 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE 965 L +++R E++ QRLA G L D +E + + Sbjct: 856 LSAHLRPRLPAELVRLFEQKRQRLAAGYAPDSPRELIDWAKERLLIPFSEWPLLLEAVRR 915 Query: 966 EVASYLENL--LAVKRIFPAMISGQE--RLACMDDAARLRDALGVR------LPESLPEI 1015 + E L R+ + E +A ++ L A + P + E Sbjct: 916 DSGLAEEELLPQIAGRLVALTLPKTEAPLVAAVEMIPELARAFALEKEELPWSPLAGDER 975 Query: 1016 YLHRVSYPLRDL----------------------FLRYLRAHALVTAEQLAHEFSLGIAI 1053 + L L R+L + + +L L + Sbjct: 976 MTALLQESLDRLWERNSLATDEGAEEEEPAAARSVARWLSYYGPIEVTRLQLTLGLSDQL 1035 Query: 1054 VEEQLQQLREQGLVM-----NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 + + LQ L E G ++ + + D V LR L+ +R+ + L Sbjct: 1036 LRDTLQTLEETGAMLIDQFTEAATEPQICDAVNLEALLRMLRRSRK-------PAFEALD 1088 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 L R + AT A S+ D + +EQL G L A LWE ++LPAR+ Y Sbjct: 1089 LSRLPLFLATVQGLAAPGSS-------ADDLRDRLEQLLGAPLSAPLWEEEVLPARLAPY 1141 Query: 1169 SSEMLDELLATGAVIWSGQKK------LGEDDGLVALHLQEYAAESFTPAEADQANRSAL 1222 LD L+ + ++W G ED L + +E A Sbjct: 1142 FGAWLDSLMQSSDLLWFGCGPKRLSFAFPEDLDLFQIQERENAPLEPGAKPPSPLIPDPR 1201 Query: 1223 -QQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRA 1281 ++ A+ G + + + + LW W G + +D +A +R Sbjct: 1202 GHYSLTAICLMSG------------------LSPATVTKQLWQEAWSGELGNDSFAAVRM 1243 Query: 1282 ----LTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTE 1337 +A + +R R R Q P Y P G L++E E Sbjct: 1244 GILNRFELPQHAASHSRHLRRPSGNRWSRVQEG-PGNWYLLPAQEGATDALEIE-----E 1297 Query: 1338 RMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQF 1397 R +L+RYGI+ R+ + E P + + R ME SG ++ G F G+ G QF Sbjct: 1298 RNKDRVRVLLERYGILFRELLARELPPLQWSRLFRTLRIMEMSGEVLSGSFFTGIPGLQF 1357 Query: 1398 AERLTIDRL-RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALV 1456 +L R + T A L+A DPA++ G L +P R + Sbjct: 1358 ISPEAYRQLERGMPTDA-------VYWLNAADPASLCGIGLDGLP---YRLPARLPSTHL 1407 Query: 1457 VVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE--PRLRFTLTEVNDLPV 1514 V G +L+L + GK++ + E ++ PE T L R+ P R + +N P Sbjct: 1408 VYRGAELVLVSRRYGKELEIKVEPDDERLPEYLRFFHTLLSRDFNPLKRIQVERINGEPA 1467 Query: 1515 RQTPMFTLLREAGFSSSPQGLD 1536 +P L GF + GL+ Sbjct: 1468 ASSPYAGALLSFGFQQAYSGLE 1489 >UniRef50_A4BMP7 Probable ATP-dependent DNA helicase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMP7_9GAMM Length = 1468 Score = 1079 bits (2791), Expect = 0.0, Method: Composition-based stats. Identities = 483/1569 (30%), Positives = 699/1569 (44%), Gaps = 192/1569 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA R WF + F +PTA Q Q W L+ APTGSGKTLAAFL A+D L REG Sbjct: 11 FQPAVRGWFEQRFGRPTAAQAQAWPAIYEGRDTLIAAPTGSGKTLAAFLAAIDALVREG- 69 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 +R+LY+SP+KAL DVQ+NLQ PL GIA++ R G + ++R +RTGD Sbjct: 70 ---LTTRLPDETRVLYVSPLKALSNDVQKNLQEPLAGIAEQLRTAGLPQPDIRAWVRTGD 126 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER+++ R PP IL+TTPESLYLMLT+ RE L GV +VI+DEVHA+AG+KRGAHL Sbjct: 127 TPQSERARMRREPPHILVTTPESLYLMLTAESGREMLAGVRSVIVDEVHALAGNKRGAHL 186 Query: 194 ALSLERLDAL----LHTSAQRIGLSATVRSASDVAAFLGGDRP--VTVVNPPAMRHPQIR 247 +LSL RLDAL L RIGLSAT + + +AAFL G +V+ R + Sbjct: 187 SLSLARLDALVENRLGKPPTRIGLSATQKPIATMAAFLTGRDAGRCNIVDTGYTRDRDLS 246 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + VP A + V S + I + + H++T++F N+R LAE+ Sbjct: 247 LCVPGAPLSAVMS--------------NDTFGEIYDQLAGLIEAHKTTLIFVNTRRLAER 292 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L E +HHGS+++E R Sbjct: 293 AARHLAERLGED-------------------------------AITAHHGSLAREHRLEA 321 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK+GELR +VAT++LELGID+GAVDLV Q+ +P ++A+ LQR+GR+GH V + KG Sbjct: 322 ERRLKNGELRALVATAALELGIDIGAVDLVCQLGSPRAIATLLQRVGRSGHAVSALPKGR 381 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA-AAMDALQVDEWYSRV 486 FP +R DL + +++ + G L+ + P PLDVLAQQ VA AA+ + Y R Sbjct: 382 LFPLSRDDLAECTALLDAVRRGELDVIRIPVAPLDVLAQQIVAEVAAVGECEEAALYDRC 441 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 A P++DL R F AT+ ML+ + + + L R A+L A+T+G Sbjct: 442 ITAWPYRDLTREAFTATVRMLADGVTTRRGRRA-AHIHRDAVNARLRPRKSARLTALTNG 500 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 G IPD+ Y V+L K +G L+E+ +ES V DI LG TS+RI +I +V Sbjct: 501 GVIPDQFDYEVILSPAGLK-----IGSLNEDFAFESLVGDIFQLGNTSYRILKIESGRVF 555 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD------GAFFSGTIPPWLAEEN 660 V A G+ +PFW GE GR EL + L A Sbjct: 556 VEDAKGQPPNIPFWFGEAPGRTDELSAAVSRLRVELEQRLTEGVAAACGWLEQELRIPVA 615 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 A + R A G +P +V ER DE+GD +I+HSP+G R++ W +A+ R Sbjct: 616 AAAQLADYYGAARAALGALPTQWCIVFERFFDEVGDMHLIVHSPFGSRLNRAWGLALRKR 675 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + + A +D IV + T + + + ++ +A + +F R+ Sbjct: 676 FCRKFNFELQAAALEDSIVLSLGATHSFVLEEVAGYLRSATVRDVLTQATLDAPMFGNRW 735 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEI--------------AQGYPDFPVILE 826 R A AL + G RTP QR A LL + A+ P+ P++ + Sbjct: 736 RWNATIALAVRRNFKGKRTPAQFQRSDAEDLLAVVFPDQLACAENLAGARVIPNHPLVDQ 795 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 TL +CLQD D+ LE L++RL GEI++ TPSP A ++ + + D Sbjct: 796 TLADCLQDTMDIEGLEALLKRLEAGEIEVIGRDLPTPSPLAEEII--NARNYAFLDDGAQ 853 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 ERR + GQ LD I +V EE + + L D L Sbjct: 854 EERRTLAVRSGGYWSAEEAGQAQ----LDSAAIERVREEAW-----PDPRDADELHDALV 904 Query: 947 ELGPMTVEDLAQRHTGSS-------EEVASYLENLLAVKRIFPAMI-SGQERLACMDD-- 996 G +T + Q + E L +R + GQ+ + Sbjct: 905 VHGFLTRAEGEQGGRNPAGLADDLSGGWPRLFETLCVDRRAACVTLPGGQQVWVAAERLI 964 Query: 997 -----------AARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAH 1045 A ++ L + P L E LR+L L VT EQL Sbjct: 965 EFQVLFADLKLAPQIEPVLEGQPPADLTEA--------LRELLRSRLEGLGPVTLEQLTA 1016 Query: 1046 EFSLGIAIVEEQLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPV 1099 L A L QL +G + W + R+ +LQ R PV Sbjct: 1017 PLGLPEAAAAIALAQLEAEGFAIQGCFGAAATSIQWCERRLLARIHRYTLQRRRREIEPV 1076 Query: 1100 AATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQ 1159 + Y R LL G+L T G G EGV G++RV+ L G LPA+ WES Sbjct: 1077 SPQDYMRFLLGWHGLLEGTAG----------GRAEGVGGLVRVLAMLEGFSLPAAAWESD 1126 Query: 1160 ILPARVRDYSSEMLDELLATGAVIWS-----------GQKKLGE-DDGLVALHLQEYAA- 1206 +LPARV DY+ +MLD L +G + W G++++G + +AL + Sbjct: 1127 VLPARVADYNPQMLDTLCTSGRIAWLRLNASHATNGDGKRRVGPVRNTPIALIERPALRF 1186 Query: 1207 --ESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWA 1264 E + SA + ++ VL GA F ++ + + + ++ L Sbjct: 1187 WQELVLAPPPEALKMSASARKLLEVLDTRGASFFHELQETAG------LLRTQAEDGLAE 1240 Query: 1265 LVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGR 1324 L G+ ++D +A LRAL S + R + AGR Sbjct: 1241 LAAWGLASADSFAGLRALLNRSGPRPAHAP-------------RTRIRRRRFAGLEEAGR 1287 Query: 1325 WSLLQVE-------PLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSM 1377 WS L+ L+D++ + +A +L RYG++ ++ + E+ + + + R + Sbjct: 1288 WSRLRTVDSVNGAGRLSDSKTLEHIAWTLLSRYGVVFKRILERESSLPAWRELLYIYRRL 1347 Query: 1378 EDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLL 1437 E G I GRFV G G QFA + LR V+LSA DP N+ G + Sbjct: 1348 EARGEIRGGRFVAGFAGEQFAAPEAVAALRKTRKAEFDGAW---VSLSAADPLNLVGIVT 1404 Query: 1438 PWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEE---LLAPEVFHALTT 1494 P PA G V++ G + + G + + E E L + HA Sbjct: 1405 PGQRLPA------VPGNRVLLRDGLPVAFCEGGEVRFVGEYEPETQWKLRNHLLRHARPA 1458 Query: 1495 ALRREPRLR 1503 R E RL Sbjct: 1459 KYRHEARLS 1467 >UniRef50_C1F8X5 Helicase, DEAD/DEAH domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8X5_ACIC5 Length = 1468 Score = 1078 bits (2787), Expect = 0.0, Method: Composition-based stats. Identities = 457/1543 (29%), Positives = 675/1543 (43%), Gaps = 208/1543 (13%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL 63 P + P ++WF F PT Q Q W L+ APTGSGKTLAAFL Sbjct: 2 PAPPIAASLAWAHPVVQEWFTSRFGTPTEPQQQGWPHILAETPTLISAPTGSGKTLAAFL 61 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 +DRL R+ E + ++Y+SP+KAL DVQ+NL+ PL I RG Sbjct: 62 ICIDRLLRKAIEGRLGF----GTEVVYVSPLKALSNDVQKNLEAPLHEIQQLALARGYLC 117 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 +R +RTGDT ER ++PP IL+TTPESLY++LTS ++RE LR V TVI+DE+H Sbjct: 118 PPIRAAVRTGDTSPAERRARLKHPPHILVTTPESLYILLTSEKSREHLRRVHTVIVDEIH 177 Query: 183 AVAGSKRGAHLALSLERLDALL--------------HTSAQRIGLSATVRSASDVAAFLG 228 A+A KRGAHL L+LERLDAL+ H + RIGLSAT VA FLG Sbjct: 178 AMADDKRGAHLTLTLERLDALVTAENTLTPAASLLTHPAPLRIGLSATQNPIELVAEFLG 237 Query: 229 GDR--PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286 G R V +V R + I VP + V++ ++W + I Sbjct: 238 GARGNEVKIVQCGQRRDLDVAIEVPTVPLGAVAT--------------NALWESVYDRIA 283 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQS 346 + V HRST+VF N+R + E++ +L E A Sbjct: 284 ELVREHRSTLVFVNTRRMVERIAFQLGERLGAEN-------------------------- 317 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 +HHGS+S++ R E+ LK+G++R +VAT+SLELGID+GAVDLV Q+ + ++ Sbjct: 318 -----VAAHHGSLSRKLRLEAERRLKAGDIRVLVATASLELGIDIGAVDLVCQINSTRAI 372 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 A +QR+GRAGH G KG FF TR DLV+SA ++ M +G L+ L P P DVL Q Sbjct: 373 AVAMQRVGRAGHWRGATPKGRFFVTTRDDLVESAALLRAMRSGVLDRLEIPPRPFDVLMQ 432 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 Q VAA A + Y+ +RRA P++DLP + FD L +L+ S + L+ + Sbjct: 433 QIVAACAAEPWDERALYNILRRAHPYRDLPWQEFDQALCLLTEGIESSR-GRYGAYLLRD 491 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVND 586 R + AR GA++ AVT+GGTIPD ++ V+ ++ LDE +S D Sbjct: 492 RIHSRVQARRGARITAVTNGGTIPDTALFPVIAQPE-----GVQIATLDEHFAVDSSPGD 546 Query: 587 IITLGATSWRIQQIT-RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL--- 642 +I LG TSWRIQ++ +V+V A G+ LPFW GE R AEL E + + Sbjct: 547 VIQLGNTSWRIQRVESAGRVLVEDAQGQPPTLPFWTGEAPQRTAELSEFVSSLRTEIDCR 606 Query: 643 ---ADGAFFSGTIPP------WLAEEN-----TIANIQGLIEEQRNATGIVPGSRHLVLE 688 A + S +P WL +E + I E R G VP +V E Sbjct: 607 TRGAQPGYLSLAVPEIAEAAAWLQQECCVCESGAKQLLQYIIEGRAGLGAVPSVTTIVAE 666 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 R DE G ++ILH+P+G R+++ W +A+ R + + A+D+GI + + Sbjct: 667 RFFDEGGGMQLILHAPFGGRINKAWGLALRKRFCRGFNFELQAAATDNGINISLAEQHSF 726 Query: 749 LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA 808 + +++ +A +S +F R++ A R+L + G + QR R Sbjct: 727 PLSDVFQFLTTHTVRELLEQASLASPIFKNRWKWAAGRSLQLLRFQKGKKVAPQVQRTRG 786 Query: 809 SQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 LL PD P++ E +++ L++ DL L ++ ++ G IQ Sbjct: 787 EDLLASVFPQAAACFENIEGDIQIPDHPLVAEVMKDVLREAMDLEGLTAVLEGIHSGRIQ 846 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 V TTTPS FA LL + + + +A L ERRA + L + Sbjct: 847 CLAVDTTTPSAFAHELL--HANPYAFLDEAGLEERRARAIQLRGAPPA-------GAGRI 897 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL 974 P+ I ++ L P + E L DLL L + LA H + + +L Sbjct: 898 SPESIDEI---RATLWPDI--RDEHELHDLLCSL-VLVPASLA--HDARTAHWGLWFAHL 949 Query: 975 LAVKRIFPAMISGQERLACMDDAARLR----DALGVRLPESLPEIY-LHRVSYPLRDLFL 1029 + R A + + A L A + +LP LR Sbjct: 950 ESTHRAVIATCNSHSYFCAAERIAWLERLWPQATFTQSVPALPHAAPPEHPEEILRKAIQ 1009 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQD----------IWVSDE 1079 +++ TA L + V +Q L G ++ + W Sbjct: 1010 GWMQILGPATARTLGERLGIAPHEVWKQFLVLETTGTMLRGVFEQLAPEDDLDIEWCERR 1069 Query: 1080 VFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGV 1139 + +R+ ++ R+ PV TY R LL+ Q + P G DG+ Sbjct: 1070 ILQRIHKATIGRLRKQVEPVPPATYLRFLLDWQHIAPQRQ-------------LTGEDGL 1116 Query: 1140 MRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSG------------- 1186 + + L G PA WE +LP RV +Y LD L TG V W Sbjct: 1117 LEALRGLQGYEAPAIEWERHLLPQRVANYDPRWLDALCLTGVVGWGRISPHPAFQSPDSG 1176 Query: 1187 --QKKLGEDDGLVALHLQEYAAESFT-------PAEADQANRSALQQAIVAVLADGGAWF 1237 ++ + + L+E A P A S L + + LA+ GA F Sbjct: 1177 GPRRVVPTSMAPITFFLREEAHWMDRCLAARQIPEAHLAACLSELANRVRSCLAERGAMF 1236 Query: 1238 AQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSH 1297 + +++ + GE + ALW LV G++T+D + LR + + + T Sbjct: 1237 SADLARLLAAPPGE------ISHALWELVAAGLVTADGFDALRQILHPHAKSSTKASPRT 1290 Query: 1298 RARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND---------TERMLALAENMLD 1348 RR N AGRWSLL + +++ + +LD Sbjct: 1291 GLRR------------------NAAGRWSLLAGDSSASDASYPAQRLDQQIESACLMLLD 1332 Query: 1349 RYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRD 1408 RYGI+ R + E + + + R +ED G + GRFV G G QFA + LR Sbjct: 1333 RYGIVFRDLALEETTLPRWRDLHAMFRRLEDRGLVRGGRFVSGFTGEQFALPQAMKALRA 1392 Query: 1409 LATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRR 1451 + T PV ++A DP N+ G +LP +P R Sbjct: 1393 CRQRPLAT--MPPVTVAAADPVNLIGTVLPGERT--AAIPGRT 1431 >UniRef50_Q01U88 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U88_SOLUE Length = 1348 Score = 1074 bits (2778), Expect = 0.0, Method: Composition-based stats. Identities = 446/1481 (30%), Positives = 653/1481 (44%), Gaps = 186/1481 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P ++WF R PT Q + W V E L+ APTGSGKTLAAFL +D L R Sbjct: 5 LDPLVQEWFDR-LGAPTEPQLRGWPVIRAGEDVLISAPTGSGKTLAAFLICIDSLVRRA- 62 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R + ++Y SP+KAL DV +NL+ PL I RG +RVG+RTGD Sbjct: 63 ---RTGELPDHTEVVYCSPLKALSNDVHKNLERPLAEIRALAEERGVKLAPIRVGLRTGD 119 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A +R ++ R P IL+TTPESLY++LT+ + RE L GV TVI+DE+HAVA KRG+HL Sbjct: 120 TKASDRQRMLRERPHILVTTPESLYILLTAEKPREMLAGVRTVIVDEIHAVADDKRGSHL 179 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 AL+L RLD L QRIGLSATV+ +VAAFL +V+ R ++ + VP Sbjct: 180 ALTLARLDRLAG-RPQRIGLSATVKPLEEVAAFLS--DKACIVHVGHRREMELAVEVPRD 236 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + V+S +W I + + + +R+T++F N+R L+E++ L Sbjct: 237 ELGPVAS--------------NEMWGGIYDRLAELIAANRTTLIFVNTRRLSERVAHHLG 282 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E HHGS+S+ R E+ LK Sbjct: 283 E-------------------------------RLGPGAVLPHHGSLSRPLRLEAERKLKD 311 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GELR VVAT+SLELGID+G VDLV Q+ +P ++ LQRIGRAGH VG + +G F TR Sbjct: 312 GELRAVVATASLELGIDIGTVDLVCQIGSPRAIGVALQRIGRAGHWVGAMPRGRLFTTTR 371 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +L++ A +V + G L+ L P N LD+LAQQ VA A + DE + R P++ Sbjct: 372 DELIECAALVRAIRKGELDKLEIPCNALDILAQQIVACCATEEWGEDELFELARATWPYR 431 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 LPR FD + +LS + + L + L R GA+L A+TSGG IPD Sbjct: 432 TLPRSDFDDVVAILSEGISTARGRS-GAYLHRDAVNRRLRGRRGARLAAITSGGAIPDSA 490 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 Y V+ +G +DE+ ES D+ LG TSWRI+++ +V V A G Sbjct: 491 NYLVVAEPE-----GITIGTVDEDFAVESLAGDVFLLGTTSWRIRRVEAGRVRVEDAHGA 545 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADG--AFFSGTIPPWLAEENTIANIQGLIEE 671 +PFWRGE GR EL + +A + + E Sbjct: 546 PPGIPFWRGEAPGRTIELSHEVSALREQIASRGVEAVEWLAAECGLDRRGAEQAAEYVRE 605 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 A G +P + +V ER DE G ++ILH+P+G R++ W +A+ R + + Sbjct: 606 GCAALGALPATNTIVAERFFDEGGGMQLILHAPFGARINRAWGLALRKRFCRSFNFELQA 665 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 A+D+GIV + + D PE ++ +A+ + +F AR+R A RAL + Sbjct: 666 AATDNGIVISLGEQHSFPLDVVFEFVRPENAKYVLTQAMLDAPMFGARWRWNATRALAIL 725 Query: 792 GRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYD 837 G + P QR+RA L+ PD P++ ET+ CL + D Sbjct: 726 RFAGGRKVPPPIQRMRADDLMAAVFPDQAACAENLTGDIRIPDHPLVKETIDNCLYEAMD 785 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 L L ++R + G I+ + T SPF+ +L + Y DAPL ERRA + L Sbjct: 786 LVGLTEMLRCIEDGTIRTIAIDTAEASPFSHEIL--NANPYAYLDDAPLEERRARAVQLR 843 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 L ++ D LDP+ IR V EE L + + L + L L Sbjct: 844 RTLRTDV---TDGAGALDPEAIRTVAEEAWPL-----VRDADELHEAL----------LG 885 Query: 958 QRHTGSSEEVASYLENLLAVKRI--FPAMISGQERLACMDDA---ARLRDALGVRLPESL 1012 + E A + L A R ERL + A A+ L L Sbjct: 886 MVILPARAEWARFFAELSAAGRATTMDGFWIAAERLDLVRRACPGAQFTPPLDAPP---L 942 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL-- 1070 + ++ + + A LA + +L I IVE L QL +G ++ Sbjct: 943 SRALPESREACVAEILRGWFECAVPLRASGLARDLALPIDIVEIALAQLEAEGQILRGHF 1002 Query: 1071 ------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPAL 1124 + W + R+ ++ R PV T +A + Q + T Sbjct: 1003 LSRGGDDEIEWAHRRLLARIHRLTIGRLRREIEPVTTTQFAAFVERWQHLAAGTQ----- 1057 Query: 1125 FASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW 1184 GV+G +RVI+QL G+ P + WES++LP R+ +YS +LDEL +G V+W Sbjct: 1058 --------LHGVEGALRVIQQLQGLEWPVAAWESEVLPRRIANYSPALLDELCLSGEVMW 1109 Query: 1185 S---------------GQKKLGEDDGLVALHLQEYAAESFTPAEADQAN-RSALQQAIVA 1228 G++ +AL L+E A E A S + ++ Sbjct: 1110 GRLSPHPAFERQTDGQGRRVRPTRVAPLALFLREDAGWLLATPEPQPAEALSHAAREVLV 1169 Query: 1229 VLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 L + GA F ++++ E +++ALW LV G++T+D + LRAL + Sbjct: 1170 SLQNRGASFFHELARNTDRAAAE------IEDALWELVAAGLVTADGFENLRALINPNRR 1223 Query: 1289 ARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLD 1348 R + AGRW+LL+ + + A +L+ Sbjct: 1224 HAVRPRHA-------------------------AGRWALLRHAQDAPPDYVERFARQLLE 1258 Query: 1349 RYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRD 1408 R+G++ R E + + + R ME G I GRF G QFA +D LR Sbjct: 1259 RWGVVFRDIAARETLAPPWRDVLVALRKMETRGEIRGGRFAAAFVGEQFALPEALDLLRA 1318 Query: 1409 LATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPT 1449 + A D W L PW A + +P Sbjct: 1319 VRR--------------AGDVHVDWNTLPPWLAADRSALPA 1345 >UniRef50_B5JLM6 DEAD/H associated family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLM6_9BACT Length = 1415 Score = 1050 bits (2715), Expect = 0.0, Method: Composition-based stats. Identities = 450/1533 (29%), Positives = 706/1533 (46%), Gaps = 171/1533 (11%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTRE 79 WF F +PT +Q + W + A EH L+ A TGSGKTLA+FL+A+ +L E + Sbjct: 2 AKWFEERFGRPTEIQEEAWKLIATGEHCLISAATGSGKTLASFLWAISQLASGAWELGQ- 60 Query: 80 AHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 +R+LY+SP+KAL D++RNL PL + R G ++RV R+GDT + Sbjct: 61 ------TRVLYVSPLKALNNDIRRNLLGPLAELEALFREEGVAWPDIRVMTRSGDTEQSD 114 Query: 140 RSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSLE 198 R K+ R+PP+ILITTPESL L+LTS+ + L G+ +VIIDEVH++ GSKRG +L +E Sbjct: 115 RRKMLRHPPEILITTPESLNLLLTSKDGQRALLGIRSVIIDEVHSIVGSKRGVYLMTGVE 174 Query: 199 RLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRIVVPVA 253 L L + QR+ LSATVR VAA++GG R V++ A + +I + P Sbjct: 175 HLARL-NGEFQRVALSATVRPMELVAAYVGGFSNGKPRRVSLAQSSATKRYEIEVRFP-- 231 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + + G + W I + + ++ ST++F NSR L EKL ++N Sbjct: 232 ------------ADSNEQGDDDDFWHPIVRDLKALIAKNNSTLIFVNSRKLCEKLAYKIN 279 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 A IA SHHGS+SKE R EQ LK+ Sbjct: 280 FEEAD-------------------------------PIAYSHHGSLSKEFRFAVEQRLKN 308 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GEL+ +VAT+SLE+GID+G++D V+ V P V+S +Q++GRAGHQVG VS+ + FP Sbjct: 309 GELKAIVATNSLEMGIDVGSLDCVVMVQCPGVVSSAVQKVGRAGHQVGAVSRAVVFPSYS 368 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 RD ++SAV+ + + +E + P PLDVLAQ V+ +DE +S+++ A P++ Sbjct: 369 RDFLESAVLSKAIQDRDIEAVRPVEAPLDVLAQVIVSILGTGPWDIDELFSQIKCAYPYR 428 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L R VFD ++M +GRY + ++ +R T R GA + SGG IPDRG Sbjct: 429 ELSREVFDLVINMQAGRYAGSRLRELKARIAIDRAENTATLRKGALMAFYFSGGVIPDRG 488 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 + + R+GELDEE V+E + D+ TLG SW+I QIT + V+V+PA Sbjct: 489 YFHLR-----HSGNGSRIGELDEEFVWERAIGDVFTLGVQSWKIDQITYNDVLVSPAASG 543 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIANIQGLI 669 PFW+ E R IG+FL L D F + +E + + Sbjct: 544 EVAPPFWKAETFDRDFHYSNRIGEFLEWANERLNDAGFVGELQERFRMDEVASKALLDFL 603 Query: 670 EEQRNATGI-VPGSRHLVLERCRDEIGDW---RIILHSPYGRRVHEPWAVAIAGRIHALW 725 +QR TG +P H++ E G +++LH+ +G RV+ P+A+A+ + + Sbjct: 604 RQQRLVTGQDLPHRHHILAEIIDAAPGGAPGQQLVLHTHWGGRVNRPFALALDAAWNEAF 663 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G V ++D +V + + I L + + +R + S F ARFRE A Sbjct: 664 GHRTEVYVNNDCVVVVLSCEVS--IEEVIGLVSLQNVDTFLRSRLEGSGFFGARFREAAG 721 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 +LL+ G R PLW R+RA +L E Q Y DFP++LE R CL+D +D+ +L ++ Sbjct: 722 TSLLVTRNKAGQRLPLWLSRMRAKKLFESVQRYDDFPLLLEAWRSCLKDEFDMESLRLVL 781 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVA-EFMYQSDAPLAERRASVLSLDSELLRNL 904 L G+I +S + SPFA+S+ + + E+MY +D+P + ++ +L +L+ + Sbjct: 782 GELEQGDIAVSISRGSKASPFASSVAWRQINEEYMYATDSPGSAGKS---NLREDLVSTV 838 Query: 905 LGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSS 964 +D ++IR EE+ QRLA G L + LR R Sbjct: 839 AFDAANRPRVDVELIRAFEEKRQRLAEGYAPGDALELKEWLR-----------DRIVIEK 887 Query: 965 EEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPL 1024 + E + + +++ A+ +D L P+ Sbjct: 888 SVWERFRELVEG-----EVSVEASGEWVYLEEEAKRKDLLFCPSPD-------------- 928 Query: 1025 RDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQ-----GLVMNLQQDIWVSD- 1078 +L + +L + V+ E++ + +++ + L + G ++ + V + Sbjct: 929 PELLIEFLSYYGAVSVERIRNWLGCDASVLTALIDTLEDDRRLVSGTLIEGDDSLCVCEA 988 Query: 1079 ---EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEG 1135 E+ R+R R + P+ L + QG+ G Sbjct: 989 ENFEILLRMRR---ARGRPSFEPLPLEKLGLFLAQWQGLAKERV---------------G 1030 Query: 1136 VDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDG 1195 VDGV +++L G WE +L ARV DY + +LD +L W G + Sbjct: 1031 VDGVREALDRLLGWTERIEDWERSLLAARVSDYGANLLDAVLLEDGSFWYGT-----SEA 1085 Query: 1196 LVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDL 1255 V L E + ++ + L ++I+ VL GG + ++ + + Sbjct: 1086 RVGFCLPE-DWDLIG--DSGNVLLAELGESIIQVLDTGGKYSFLKLIELLG------CRS 1136 Query: 1256 SALQEALWALVWQGVITSDIWAPLR-------ALTRSSSNARTSTRRSHRARRGRPVYAQ 1308 S L+EALW LVWQG +++D +A R L S SN S+R RR R Sbjct: 1137 SDLEEALWQLVWQGRVSNDAFASARRGAAGKFQLCASESNRVPSSRAIRMGRRARASR-T 1195 Query: 1309 PVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFP 1368 P Y P L ++ V A +LDRYG++ R+ ++ E + Sbjct: 1196 VSYPGSWYALPELDVESDVVAVLEAEKE-----RARIVLDRYGVVFRELLLREEEGFRWK 1250 Query: 1369 SMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSAND 1428 + R +E SG I+ GRF EG+ G QF + + LR LSA D Sbjct: 1251 DVFRAFRLLELSGEIVGGRFFEGIQGLQFVSKEALRGLRK------PLPEKAIYWLSATD 1304 Query: 1429 PANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEV 1488 PA++ G + ++P R +V G +L+ +GGK + E + P+V Sbjct: 1305 PASLCGLGV---DELKGVLPKRVGSNRLVYRGSELVCESQRGGKALAFHVEAGDADLPQV 1361 Query: 1489 FHALTTALRREPRLRFTLTEVNDLPVRQTPMFT 1521 L AL + + +N R + Sbjct: 1362 ISTLADALGLGAMAQLKIETINGEDARCSAYLE 1394 >UniRef50_D0LRM6 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRM6_HALO1 Length = 1573 Score = 1048 bits (2710), Expect = 0.0, Method: Composition-based stats. Identities = 453/1590 (28%), Positives = 664/1590 (41%), Gaps = 223/1590 (14%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF F PTA Q Q W A E L+ APTGSGKTLAAFL LDRL + Sbjct: 31 FHPVVASWFRARFGSPTAPQTQGWPRIAAGEDTLIAAPTGSGKTLAAFLACLDRLIQR-- 88 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + + + ILYISP+KAL D+ RNL+ PL + + G +R +RTGD Sbjct: 89 --SLRSVLPERTHILYISPLKALSNDIFRNLETPLAELGEAFAEAGLCLPPIRTAVRTGD 146 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER+K+ + PP ILITTPES YL+LTS+ R L VETVI+DE+HAVA KRGAHL Sbjct: 147 TPQSERAKMAKRPPHILITTPESFYLLLTSKSGRAALSAVETVIVDEIHAVARDKRGAHL 206 Query: 194 ALSLERLDALLHTS----AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 LSLERLD L+ + R+GLSAT R +A +L G R + + Sbjct: 207 GLSLERLDRLVRSESGRAPVRVGLSATQRPIELIAEYLSG------------RARPLPHI 254 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 V + + T ++ A + I++ + +H +T+VF N+R L E++ Sbjct: 255 VDAGHARTLDIAIEITDDELGALASHEQMGRVYDRIVELIEQHHTTLVFVNTRRLVERVA 314 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 L E +HHGS+S+E R EQ Sbjct: 315 HALEERLGEER-------------------------------VVAHHGSMSREMRLAAEQ 343 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 LK G++ C VAT+SLELGID+G VDLV+Q+ +P S+A+ LQRIGR+GH G+ KG F Sbjct: 344 KLKFGQVACAVATASLELGIDVGPVDLVVQLGSPRSIATMLQRIGRSGHSRRGLPKGRLF 403 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 TR LV+ A +V + L+ + P +P D+LAQQ VAAAA + L+ DE ++ V A Sbjct: 404 ALTRDQLVECAALVRAVCKHNLDAIEPRMSPFDILAQQIVAAAACEDLEQDELFALVSGA 463 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 +++L R FD L MLS S + W+R G + AR GA+L A+TSGG I Sbjct: 464 FHYRELAREDFDKILLMLSEG-VSDRRGRATAHIHWDRIGGRIKARRGARLAALTSGGAI 522 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD Y V+L E R+GE+DE+ ES D+ LG WRI+++ +V+V Sbjct: 523 PDNANYQVVLYPEEL-----RIGEVDEDFAIESSPGDVFLLGNAPWRIRRVETGRVLVED 577 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAF---FSGTIPPWL-----AEENT 661 A G +P W GE GR EL E +G + I W+ Sbjct: 578 ARGAPPTVPHWVGEAPGRTIELSEEVGTLRDEVEARIAAGEAPADIAAWVGEVACMPRTA 637 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + + E R A G +P +R L+ ER DE G ++++H+P G R++ W +A+ R Sbjct: 638 AEQLVAYLREARGALGTLPTTRRLIAERFFDEGGGMQLVIHAPLGGRINRAWGLALRKRF 697 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + + A+DDGIV + + + +I+ +A+ + +F R+R Sbjct: 698 CRSFDFELQAAATDDGIVISLGQPHSFPLETVFQFLSSVSVEEILVQALLDAPMFEIRWR 757 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILET 827 A R+L + R + R+RA+ LL + + PD P++ ET Sbjct: 758 WNATRSLTVLRRYGAKKVAPHILRMRANDLLSVVFPQQQACLENIPGDREIPDHPLVAET 817 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 +R+CL + D+ L +L+ + G I++ T +PSP L+ F+ +DA Sbjct: 818 VRDCLTEAMDIERLRQLIADIENGRIEVLGRDTVSPSPLCHELIMANPYAFLDDADA--E 875 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 RR +SL L LD IR+ EEE + + + L D L Sbjct: 876 NRRTRAVSLRRSLPDQ-----GDATALDESAIRRAEEEAR-----PSVRDLDELHDALLS 925 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVR 1007 L + E L GSS A ++ L++ R + R AA Sbjct: 926 L-VLVPEPLGLSLAGSSALSAPLMDRLISDGRATRLRYDSRGRECVAWVAAERLPVARAA 984 Query: 1008 LPESLPEIYLHRVSYPL-----RDLFLRYLRAH----ALVTAEQLAHEFSLGIAIVEEQL 1058 +PE+ L + + + ++ +R +RAH + +LA E L A V Sbjct: 985 VPEAEELPALPPLPFAVEVPAPEEVDVRIVRAHLDYSGPRSGRRLADELGLPGARVLAAC 1044 Query: 1059 QQLREQGLVMNLQ-------------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYA 1105 L G ++ W + + R+ +L R PV+A Sbjct: 1045 YALENDGAILRGSFTPGLSGKPEDDLDIEWCNRRILARIHRLTLARLRSEIEPVSAAALM 1104 Query: 1106 RLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARV 1165 R L Q V G DG++ V+EQL G A WE ++LPAR+ Sbjct: 1105 RFLFRWQRV-------------NHENRLIGEDGLLTVLEQLQGFETAAGAWERELLPARL 1151 Query: 1166 RDYSSEMLDELLATGAVIWSGQKKLGEDDG------------------------------ 1195 Y LD L +G V W Sbjct: 1152 HGYQPAWLDALCLSGQVAWCRLSPRMPSHPDPASEIDADDTSDSDSAAAHAGAANENAGA 1211 Query: 1196 --------LVALHLQEYAAESFTPAEADQANRSALQQA-----------------IVAVL 1230 L + A + R+ ++ I L Sbjct: 1212 GAGANGKRRGRLAPTKAAPLALLLRRDLDWLRAPSARSDSVFDRVDADRVESADDIAQAL 1271 Query: 1231 ADGGA-----WFAQQISQRIRDKIGESVDLSAL-----QEALWALVWQGVITSDIWAPLR 1280 A+GG ++ + E V + L ++ LW L G+ T+D +A LR Sbjct: 1272 AEGGFGDAARAVYAHLASAGASFLAELVRGTGLAPEQVEDGLWQLAQAGLATADGFAGLR 1331 Query: 1281 ALTRSS--------------------SNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 L + + RA R + + P Sbjct: 1332 VLVDRAAGESRSLFDEVGRRSQDRKTGPRGAGSSAWQRAVRKARQRERQRPAHAVRSLPT 1391 Query: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 AGRWSLL + A+A +L RYG+I R ++ E+ + + R +E Sbjct: 1392 AAGRWSLLGPPDPAQVD-PEAVALQLLQRYGVIFRDLLVRESNLPPWREVLICLRRLEAR 1450 Query: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 G + GRFV G G QFA +D LR + ++A DP N+ G P Sbjct: 1451 GEVRGGRFVSGFVGEQFALPEAVDGLRSMRRAPA---IDEFTLITATDPLNLVGITSAGP 1507 Query: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQG 1470 PA + G ++ G L G Sbjct: 1508 KTPAVM------GNAILFRNGVPLASREAG 1531 >UniRef50_A7H7C5 DEAD/H associated domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H7C5_ANADF Length = 1475 Score = 1046 bits (2705), Expect = 0.0, Method: Composition-based stats. Identities = 473/1564 (30%), Positives = 664/1564 (42%), Gaps = 203/1564 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P RDWF+R F T Q W LV APTGSGKTLAAFL+A+D L +E Sbjct: 3 DAFHPVVRDWFVRRFGDATEPQTPAWREIGARRDVLVSAPTGSGKTLAAFLHAIDALLKE 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G +R++Y+SP++ALG D+ +NLQ PL I G LRV +RT Sbjct: 63 G----LAGELGDRTRVVYVSPLRALGNDISKNLQAPLAEIRAAAHAAGLALPELRVAVRT 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GDTPA R KL PP IL+TTPESLYL+LT R +L VETVI+DE+HA+AG KRGA Sbjct: 119 GDTPAAARRKLLLRPPHILVTTPESLYLLLTCDSGRASLGDVETVIVDEIHALAGDKRGA 178 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 HLALSLERL+AL QRIGLSATV +++A FL G V R +V Sbjct: 179 HLALSLERLEALARRRPQRIGLSATVDPVAEMARFLVGAERVD------RRGNARCAIVE 232 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 V ++ + +W + + + HRST+VF +R LAE+ Sbjct: 233 VGRRRRFDVAIEVPRDELSSVASKELWAESYDRVAELIRAHRSTLVFVGTRRLAERAAHA 292 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L E +HHGS+S+E+R TE+ L Sbjct: 293 LAE-------------------------------RLGDGAVAAHHGSLSRERRLATEERL 321 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G LR VVAT+SLELGID+G VD+V+Q+ +P ++++G+QRIGRA H GG KG FP Sbjct: 322 KAGALRAVVATASLELGIDVGEVDVVVQLGSPGAISTGVQRIGRAAHVRGGTPKGRLFPM 381 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 +R +LV+ A V + RLE + P PLDVLAQQ VA A ++ D Y+ RRA P Sbjct: 382 SRDELVECAAFVRGLRRARLEPVAPRDAPLDVLAQQLVAEATCGSIHEDRLYALARRAWP 441 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++ LPR FDA ++ML+ + L + G + AR GA++ A+T GGTIPD Sbjct: 442 YRALPRADFDAVVEMLAEGIATTPGRTT-ALLHRDGVNGRVKARRGARIAALTGGGTIPD 500 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ +G++DE+ ES D+ LG TSW I+++ V V A Sbjct: 501 TAQYAVVAEPE-----GVTIGQVDEDFAVESLAGDVFLLGTTSWMIRRVEAGIVRVEDAH 555 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT-----IANIQ 666 G +PFW E GR A L + L WL E + Sbjct: 556 GAPPGVPFWNAEAPGRSAALSAEVSALRAELEPRLADPPAAIAWLVAEAALPEAGARQVV 615 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 + R A G +P LV ER DE G +++LH+P+G R + + +A+ R + Sbjct: 616 DYLAAGRAALGALPTQDTLVAERFFDEAGGMQLVLHAPFGARTNRAFGLALRKRFCRTFD 675 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 + A+DDG++ + + P L +++ +AV + +F R+R A R Sbjct: 676 FELQAAATDDGVLLSLGPQHAFPLETIFSYVTPATLDEVLEQAVLQAPMFGVRWRWNATR 735 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFPVILETLREC 831 AL +P G R P R+RA LL PD P++ ETLR+C Sbjct: 736 ALAIPRLFRGKRMPPPIARMRAEDLLAAVFPAQVACQDNAPGGPLEVPDHPLVRETLRDC 795 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L + D L L+ R+ GE+++ V T PSP + LL + Y DAPL ERRA Sbjct: 796 LTEAMDAAGLRALLERIAAGEVRLLAVDTPEPSPLSHELL--NARPWAYLDDAPLEERRA 853 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 +++ L + LDP I +V E++ + + + D L +LG + Sbjct: 854 RAVAVRRALPA---AEASGIGALDPAAIAEVAEQVW-----PAPRDADEVHDALLDLGVL 905 Query: 952 TV---------------EDLAQRHTGSSEEVASYLENLLAVK------------------ 978 + A R T E + + Sbjct: 906 PLTAAAGWEGWLGELEVAGRAARMTVGEARWWVAAERVGTARGAAVELGGATPTPTPAGS 965 Query: 979 ------------------------------RIFPAMISGQERLACMDDAARLRDALGVRL 1008 I G R ++ A A+ Sbjct: 966 PEAGHPERSDAATAAARSRRAPTPTPTPSTPALAGRIEGSARPEPVEARAGAAGAIFAPP 1025 Query: 1009 PESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM 1068 LP + + + ++ TA LA L + L +L +GLV+ Sbjct: 1026 LSPLPSERI--PDDAVLAVVRGWVTHLGPTTARDLAGRIGLPESAAASALLRLEAEGLVL 1083 Query: 1069 NL----------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPAT 1118 + W V R+ +L R PV+ + R L Q V P T Sbjct: 1084 RGTFLPDAPWSAEAPHWCERSVLARIHRLTLGRLRREIEPVSTAVFLRFLARWQHVAPGT 1143 Query: 1119 DGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLA 1178 G G+ V+ QL G A WE +LPARV Y +LD Sbjct: 1144 -------------RLHGAHGLAEVLGQLQGFHAAAGAWERDLLPARVGGYEPALLDAACL 1190 Query: 1179 TGAVIWSGQKKLGEDDG------------LVALHLQEYAAESFTPAEADQANRSALQQAI 1226 +G V W DG V L L+E + + A+ Sbjct: 1191 SGEVAWGRLHVAPPQDGSPRRKGAPTRSAPVTLALREDLPWLLEAIAPEPPPLGEIATAL 1250 Query: 1227 VAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSS 1286 V VLA GA F +++ + GE+ +EALW LV G++T D +A LRAL Sbjct: 1251 VEVLARRGASFLAELAPAVGAPPGET------EEALWELVSAGLVTCDGFAGLRALIAPP 1304 Query: 1287 SNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENM 1346 R + GR + + A S + L+ LA Sbjct: 1305 PRGRVI---RPGSAGGRWALLRAPGAIERAASGESA--TSSVSQPTLD------HLAHQY 1353 Query: 1347 LDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL 1406 L RYG++ R + E P + + + RS+E G + GRFV G G QFA +D L Sbjct: 1354 LRRYGVVFRDLLAREPRPPPWRDLVRVYRSLEARGELRGGRFVVGFSGEQFALPEAVDAL 1413 Query: 1407 RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLY 1466 R H + LSA+DP N+ G L P P PA G+ +V+ GG Sbjct: 1414 RAARRAGDG--HAERLDLSASDPLNLAGILTPGPRIPA------VPGSRLVLEGGVPAAT 1465 Query: 1467 LAQG 1470 A G Sbjct: 1466 PAPG 1469 >UniRef50_C5EPU4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C5EPU4_9FIRM Length = 1438 Score = 1036 bits (2679), Expect = 0.0, Method: Composition-based stats. Identities = 468/1581 (29%), Positives = 714/1581 (45%), Gaps = 208/1581 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 P+ L +FS T WF +PT VQ TW A + LV APTG+GKTL+AFL + Sbjct: 2 PTDTLT-LFSQPTAQWFKDTLGRPTKVQEDTWPAIASGQPVLVSAPTGTGKTLSAFLVFI 60 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR------- 119 DRL+ E T ++ ++Y+SP+K+L D++ NL PL+GI E RR Sbjct: 61 DRLYAMAEEGT----LKEELYLIYVSPLKSLAGDIRENLNRPLEGIRQEMERRVGAARQT 116 Query: 120 ------------------------GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTP 155 G T ++++VGIRTGDTP ++R ++ ++PP ILI TP Sbjct: 117 GYADLAGNVHPAGKIHPAGDVHPAGTTSLDIQVGIRTGDTPQKDRQRMVKHPPHILIITP 176 Query: 156 ESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLS 214 ESLYLMLTS ++ LR VIIDE+HA+ +KRGAHL LS+ RLD L QRIGLS Sbjct: 177 ESLYLMLTSMTGQKVLRTARAVIIDELHALIDTKRGAHLMLSIARLDRLCGRPLQRIGLS 236 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 AT+ AA+L P + P + +I I+ S R+ Sbjct: 237 ATIEPLELAAAYLS-PEPAVICAPAMEKQIRIEIL---------------GTTPSQGRRK 280 Query: 275 GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE 334 +W + + + L RS I F+ R AEKL +N L Sbjct: 281 DPVWEELGQAVYRQCLSCRSVIAFSEGRRYAEKLAYYVNLL------------------- 321 Query: 335 STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAV 394 AR HHGS+SKEQRA EQ L+ G LR + ATSS+ELGID+G + Sbjct: 322 ------------GGDGFARVHHGSLSKEQRAEVEQDLRDGRLRLLCATSSMELGIDVGEL 369 Query: 395 DLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENL 454 DLVIQV P +V+S +QR+GRAGH G VS +PRT + V + + G +E+ Sbjct: 370 DLVIQVGCPRTVSSTMQRLGRAGHGPGRVSVMYMYPRTASESVYCGMTAQVARQGGVEHT 429 Query: 455 TPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG 514 PP LDVLAQ V+ A + V++ + + R+ P++D+ A L ML+G Y Sbjct: 430 KPPRMCLDVLAQHLVSMANGEGYCVEDVMAVLERSYPFRDVTGEDIKAVLSMLAGDYEHR 489 Query: 515 DFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGEL 574 RP+++++R G + +++LA +GGTIPD+G+Y+ +G ++GEL Sbjct: 490 RDIPVRPRVLYDRIHGRVEGDAYSRMLATAAGGTIPDKGLYTAKTEDGV------KLGEL 543 Query: 575 DEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEM 634 DEE VYES++ D LG+ W+I I +D V V+ P ARLPFW+GE GR + Sbjct: 544 DEEFVYESQLGDKFMLGSFGWKITGIDKDTVYVSQVPAEGARLPFWKGEIRGRTLKTSRE 603 Query: 635 IGDFLHLLA---DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCR 691 G L L + + +E + N G +E Q +TG +P ++ +V+E Sbjct: 604 FGKILAGLEAAHEQGRLREELSALGMDEAAVINASGFLERQIQSTGGLPDNKTIVVEHFT 663 Query: 692 DEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPD 751 D G +++LH+ GRRV+ P ++ + + + G D V +DG + P G +P+ Sbjct: 664 DHTGCHQVMLHALLGRRVNGPLSLLLQHMVRNICGFDIGCVDEEDGFLL-YPYGSGVMPE 722 Query: 752 AAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQL 811 ++ EP+++ + + + + LF FR AARAL+M G G R PLW QRL+++++ Sbjct: 723 GLLYRLEPDQVRETLEAMLPLTPLFGMAFRYNAARALMM-GMKQGGRQPLWMQRLKSTEM 781 Query: 812 LEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 L+ D P+I ET RECL+D +D+ + +++ + G I + +V T PSP + L Sbjct: 782 LDSLMNEKDHPLIRETKRECLEDQWDIDGVIQILHEIRAGLIHVREVCTDVPSPMSLPLQ 841 Query: 872 FGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAP 931 + A MY+ R +V + L+ L G E L+ Q +E RL Sbjct: 842 WQVEAAEMYEYAPATPGIRQAVY----DELKYLEGIRPAPEALEKQ------QERTRL-- 889 Query: 932 GRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIF---PAMISGQ 988 + E L +L G + +L + +L +L A R P + Sbjct: 890 ---PQDEAQLHSILMTEGDLEAGEL--------DVPVEWLASLAAQGRALYIEPGLWIAA 938 Query: 989 ERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFS 1048 E+ + A + L + +R L RY + H Q+ + Sbjct: 939 EQEEEYEKAFSMDG--------------LEEATAIVRRLL-RYRKGHTP---GQIGERYF 980 Query: 1049 LGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 L V L+ L +G ++ I+ +++ R R +L+ R T YA LL Sbjct: 981 LPEEKVGVILELLCSRGEIVEADG-IYYHRKLYDRARQSTLKNLRRETATQPGAHYAALL 1039 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 R P T + + + +E G P WE+ +LP RVR+Y Sbjct: 1040 AGR--AKPYTQAD---------------EQLKKTLELYCGRMFPVRFWENVLLPRRVRNY 1082 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVA 1228 S MLD LLA G W K+ D L ++ ++ P LQ I Sbjct: 1083 SEGMLDRLLAEGDYYW----KMSPDGALCFCRYEDIDWDAPLPDMEGILGGEELQ--IYR 1136 Query: 1229 VLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 L GA F + ++ ++K QE L L +G++ +D + P+R Sbjct: 1137 ELKRRGACFLKFLADIPKEKSA--------QELLLGLAEKGLVCADSFVPVRQWQNREKV 1188 Query: 1289 ARTSTRRSHRAR-----RGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALA 1343 + + R+ AR GR +P+ P+ L + Q +P+ E A Sbjct: 1189 KKATARQRVSARVMALSAGRWDIVRPLKPKKMEEWLEL-----IFQEQPVMCRETFRRAA 1243 Query: 1344 ENMLDR-YGIISRQAVIAENIPG----------GFPSMQTLCRSMEDSGRIMRGRFVEGL 1392 + Y QA A + G + + L R E +G++ RG FVEG+ Sbjct: 1244 AGLAGSPYLPGFSQAGAARSDAGEAAGAARSDMNYQNAMELLRIWEYTGQVRRGYFVEGM 1303 Query: 1393 GGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRA 1452 GAQF + + + T A + + L+A DPA +WG +L P L Sbjct: 1304 SGAQFIRKEEYEGV----TAALKAPEDGIIWLNAADPAQIWGKILVQPGERDFL---NVP 1356 Query: 1453 GALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDL 1512 G V + G++ L + G+ + V++ + +VF R P L+ + Sbjct: 1357 GTAVALHCGRVTAVLERQGRVLRVFESQGLEQTLQVFVNDFKGKRLFPELKRLI------ 1410 Query: 1513 PVRQTPM--FTLLREAGFSSS 1531 VR+ P L+ AGFS Sbjct: 1411 -VREYPEGTGETLKRAGFSRE 1430 >UniRef50_B1FTZ8 DEAD/H associated domain protein n=2 Tax=Burkholderia RepID=B1FTZ8_9BURK Length = 1553 Score = 1031 bits (2665), Expect = 0.0, Method: Composition-based stats. Identities = 463/1628 (28%), Positives = 675/1628 (41%), Gaps = 246/1628 (15%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 F PA WFL+ F PT Q W R LV APTGSGKTL AFL ALD L ++G Sbjct: 28 AFHPAVAGWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQG 87 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + + ++Y+SP+KAL D++ NLQIPL+GIA E RG +++R +RTG Sbjct: 88 LAN--HGALPDETLVVYVSPLKALSNDIRLNLQIPLQGIAAELDARGLPPLDIRTAVRTG 145 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 DT QER+ L + P IL+TTPESLY++L S R L V TVI+DE+HA+AGSKRG+H Sbjct: 146 DTTQQERNALRKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGSKRGSH 205 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 LALSLERLDAL RIGLSAT + S VA FL G + P ++ V Sbjct: 206 LALSLERLDALCGRRLPRIGLSATQKPVSAVARFLVGGASIDSDVPADCA------IIDV 259 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 ++ A +W + + + V HR+T++F N+R +AE+ L Sbjct: 260 GHIRARDLALEIPPVPLEAVMPNEVWERVYDRLAELVALHRTTLIFVNTRRMAERAARHL 319 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 E +HHGS++KE R EQ LK Sbjct: 320 TERLGKE-------------------------------AVAAHHGSLAKEHRFDAEQRLK 348 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GHQVGG+ KG FP + Sbjct: 349 RGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHQVGGMPKGRLFPTS 408 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 R DL++ A +++C+ G L+ L P PLDVLAQQ VA + D + +RRAAP+ Sbjct: 409 RDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWSEDALFDLMRRAAPY 468 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 +L R +DA L ML+ Y S + L + +G L R G +L+AVTSGGTIP+ Sbjct: 469 AELTREQYDAVLRMLAEGYTSRNGPRA-AYLHRDVVSGTLRGRRGGKLVAVTSGGTIPEN 527 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 Y+V+L VG ++E+ ES D+ LG S+RI +I +V V A G Sbjct: 528 ADYAVVLEPQAIN-----VGTVNEDFAVESLAGDVFQLGNASYRILRIESGRVRVEDAQG 582 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA--------- 663 + +PFW GE GR EL + + + A Sbjct: 583 QPPNIPFWLGEAPGRSDELSLGVARLREQIGRLLEADEPTAAAALLDADEAATASAAPLI 642 Query: 664 ----NIQGLIEEQRNATGIVPGS-----------------------------RHLVLERC 690 + ++ +R G P L+ E Sbjct: 643 AQSPKTRARLQSKRATNGESPAEAKQAKQPTEVTLATQPRNDPMSARLERAIDWLIAELG 702 Query: 691 RDEIGDWRIILHSPYGR------RVHEPWAVA----------------IAGRIHALWG-- 726 DE +I+ + R H+ + R++ WG Sbjct: 703 LDEAAARQIVDYLARARAALGVLPTHDTLVMERFFDESGGTQLVIHAPFGSRVNRAWGLA 762 Query: 727 ----------ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALF 776 + A++D IV + + + D ++ +A+ + LF Sbjct: 763 LRKRFCRQFNFELQAAATEDAIVLSLTGSHSFVLDEVWRYLHSASAEHLLIQALLDAPLF 822 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFP 822 R+R A AL +P T G +T QR+R+ LL + P P Sbjct: 823 GVRWRWNATTALGLPRYTGGRKTAPQLQRMRSEDLLTSVFPEQAACLENVVGERELPRHP 882 Query: 823 VILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQS 882 ++ +T+ +CL D D L+RR+ G++++ PSP A +L + Y Sbjct: 883 LVDQTVDDCLHDAMDSERWIALLRRIESGDVRLVARDLPAPSPLAAEIL--NAKPYAYLD 940 Query: 883 DAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLF 942 DAP+ ERR + + D LDP I V +E +A+ + + Sbjct: 941 DAPIEERRTQAVLNRRWTDPS---SADDLGALDPDAIASVRDEAW-----PQARSVDEMH 992 Query: 943 DLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPA----------MISGQERLA 992 + L L +T + +E +LE+L R + ERL Sbjct: 993 EALTGLACITEAEAR-----GNEGWPQWLESLAQSGRATRLQIAADAADAALWLPAERLT 1047 Query: 993 CMDDAARLRDALGVRLPESLPEIYLHR--VSYPLRDLFLRYLRAHALVTAEQLAHEFSLG 1050 C D P + P+ Y L D+ L + A +A L Sbjct: 1048 CFAALYPEPDGPRFAPPLTAPKGYADEWSADDALVDVLRARLTGFGPLPAAAIADTLRLP 1107 Query: 1051 IAIVEEQLQQLREQGLVMNLQ------------QDIWVSDEVFRRLRLRSLQAAREATRP 1098 VE+ L +L +G VM + D W + R+ +++ R P Sbjct: 1108 QTSVEQALIRLEAEGYVMRGRFTPQALQAPDAPGDEWCERHLLARIHRYTVKRLRREIEP 1167 Query: 1099 VAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWES 1158 V + R L E Q + P T EG D + V+EQL G AS WE Sbjct: 1168 VERHDFMRFLFEWQHLTPDTRS-------------EGRDALAAVLEQLEGFEAAASAWEE 1214 Query: 1159 QILPARVRDYSSEMLDELLATGAVIWSG-------QKKLGEDDGLVALHLQEYAAESFTP 1211 ILPARV+ Y++ LDEL G ++W+ +V L + S Sbjct: 1215 DILPARVKAYTNTSLDELCRAGKIVWTRLTERSRSAAGPVRGTPIVLLPRPQVRVWSALI 1274 Query: 1212 AEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVI 1271 A Q S QA+ L+ GA F ++ +R V L+ AL LV G++ Sbjct: 1275 DPARQPELSPRAQAVHDALSQHGAMFFDELLHELR------VLRIELENALGELVAAGLV 1328 Query: 1272 TSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL--- 1328 SD +A LRAL + ++ R ++ V + AGRW+L+ Sbjct: 1329 NSDSFAGLRALLKPAAK------------RNAYSGSRRVRSTALIGGMDDAGRWALVNRP 1376 Query: 1329 -----------------QVEPLNDTERMLALAENMLDRYGIISRQAVIAE-NIPGGFPSM 1370 Q E + +A +L RYG++ + + E + + + Sbjct: 1377 VPAAVSANETPPQSLQSQRRRTLPPEIVEHVAMTLLRRYGVVFWRLLEREADWLPPWRDL 1436 Query: 1371 QTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPA 1430 + + +E G I GRFV GL G QFA I LR++ A V + DP Sbjct: 1437 LRVYQRLEARGVIRGGRFVNGLAGEQFALPEAIPLLREVRRHANDGAF---VCVGGTDPL 1493 Query: 1431 NVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFH 1490 N+ G LL PA G V+ G ++ L G + E E Sbjct: 1494 NLAGTLLVGERVPA------VGGNRVLYRDGVVVATLVAGA---FWFDASLEASPAERER 1544 Query: 1491 ALTTALRR 1498 A + RR Sbjct: 1545 ARSWLTRR 1552 >UniRef50_A8RJ57 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ57_9CLOT Length = 1405 Score = 1028 bits (2658), Expect = 0.0, Method: Composition-based stats. Identities = 432/1548 (27%), Positives = 678/1548 (43%), Gaps = 194/1548 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF + F +PT +Q + W A +H LV APTG+GKTL+AFL +D+L G Sbjct: 13 FLPATESWFRKTFGEPTKIQREAWPAIADGKHVLVSAPTGTGKTLSAFLVFIDQL----G 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER-------RRRGETEVN-L 126 ++ ++Y+SP+K+L D++ NL+ PL+GI E R G + + Sbjct: 69 GLAERGELKEELYVIYVSPLKSLAGDIRENLRKPLEGIGAEAPGESKAESRPGNPSIGQI 128 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVA 185 + IRTGDTP +ER ++ ++PP ILI TPESLYLMLTS+ R+ L+ + +I+DE+HA+ Sbjct: 129 QTAIRTGDTPQKERQRMVKHPPHILIITPESLYLMLTSKSGRQVLKTAKAIILDEIHALI 188 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 +KRGAHL LS+ RLD L QRIGLSAT+ AA+L P + P + Sbjct: 189 DTKRGAHLMLSVARLDKLCGRRLQRIGLSATIEPLELAAAYLS-PEPAVICAPSMDKQVD 247 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 I+++ + R+ +W + + + L +S I F+ R Sbjct: 248 IQVI---------------GTAPAVGRRKDPVWEELGMAVYRQCLSCKSVIAFSEGRRYV 292 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 EKL +N L AR HHGS+SKEQR Sbjct: 293 EKLAYYVNLL-------------------------------GGDGFARVHHGSLSKEQRD 321 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E+ L+ G LR + ATSS+ELGID+G V+ V+QV P +++S +QR+GRAGH G VS Sbjct: 322 EVERDLREGRLRLLCATSSMELGIDVGDVEQVLQVGCPRTISSTMQRLGRAGHNPGRVSV 381 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 +PRT + V + + G +E PP LDVLAQ V+ A+ ++ +D+ Sbjct: 382 MYMYPRTAPESVYCGMTAQVARRGGVERANPPRMCLDVLAQHLVSMASGESYSIDDVMDV 441 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 + R+ P+ + R+ + L ML+G Y RP+++++R G + +++LA + Sbjct: 442 LERSYPFYQVTRKDVEDVLAMLAGDYEHSREIPVRPRILYDRIHGRVAGDVYSRMLATAA 501 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 GGTIPD+GMY+ +G ++GELDEE VYESR+ D LG+ WR+ + +D V Sbjct: 502 GGTIPDKGMYAAKTEDGV------KLGELDEEFVYESRIGDRFMLGSFGWRVVRQDKDSV 555 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT---IPPWLAEENTI 662 IVT AP ARLPFW+GE GR G L L + +E+ Sbjct: 556 IVTQAPAEGARLPFWKGETKGRDLRTSLAFGRILGELEKACREGELEKALEKLGLDESAS 615 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 + G I Q AT +P R +V+E +D G ++++H+ +GRRV+ P ++ + I Sbjct: 616 VHASGFITRQIQATEGLPDDRTIVVEHFKDSTGSHQVMVHALFGRRVNGPLSLVLRHMIR 675 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 G D V +DG + P +LP+ +F P+++ ++ + + LF FR Sbjct: 676 NTMGMDVGSVDEEDGFLL-YPYGREQLPEGLLFQINPDQVRPVLEAILPDTPLFGMTFRY 734 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 AARAL+M + G R PLW QRL+++++L PD P+I ET RECL+ +D+ + Sbjct: 735 NAARALMMGMKRNG-RQPLWMQRLKSTEMLSSLMDQPDHPLIRETKRECLEHQWDISGVM 793 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 ++ R+ G I + ++ PSP + + AE MY+ + R +V Sbjct: 794 EILARIRSGFITVREIWLDVPSPMSLPFQWQAEAEEMYEYSPVTPKIRQTV--------- 844 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRR-AKGEEGLFDLLRELGPMTVEDLAQRHT 961 E L +++ EEL R R+ + EE L LL G + +L Sbjct: 845 --------QEDLKKALLKPTPEELSRGWSRRKMPENEEELHSLLMMEGDLEAGEL----- 891 Query: 962 GSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVS 1021 + A +LE L + AA D L + E +H Sbjct: 892 ---DIPADWLEALARQGLACYVEPG-------IWIAAEHEDEYMRALQQQDEEAAMH--- 938 Query: 1022 YPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVF 1081 + R L TA + + L + E L +L + Q ++ ++++ Sbjct: 939 -----IVRRMLYYRGGQTAVDVRERYFLSEEMTEALLDKLCRCKKAVEDQG-VYYHEKLY 992 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR 1141 R R ++ R T A+ YA L+ R + + + Sbjct: 993 ERAREGHIRILRSQTATQPASHYAALMAAR-----------------AVTHSTAEEQLRE 1035 Query: 1142 VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHL 1201 +E+ P WE+ RV Y + +LD LLA G W ++ + L Sbjct: 1036 AVEKGCRKPCPVRFWENVYFARRVERYGASLLDRLLAQGDYFW----RMSPEGTLCFCSY 1091 Query: 1202 QEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEA 1261 ++ E+ A A+ A + + L GA F + +++ ++ QE Sbjct: 1092 EDIDWEA--SAGAETAGLKGDELLMYQELKRRGASFLKFLTKIPKEGSA--------QEV 1141 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNL 1321 L +L +G++ +D + P+R + + R+ R Sbjct: 1142 LLSLAEKGLVCADSFVPVRQWQNQDKVKKVAVRQRVNTRVMALS---------------- 1185 Query: 1322 AGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAE-----------------NIP 1364 AGRW +++ E E D I+ R+ Sbjct: 1186 AGRWDIVRPVRKYGPEE---WLEQFFDENMILCRETFRKSVQAVSDSPYVQTGEDGKKWE 1242 Query: 1365 GGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVAL 1424 + + R E +GRI RG FVEG+ GAQF D + T A + V L Sbjct: 1243 WSWAQALEILRIWEYTGRIRRGYFVEGMSGAQFVRGEDYDAV----TGALREPDDHTVWL 1298 Query: 1425 SANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE-EL 1483 + DPA VWG +L P L AG V + GKL + + G+ + + ++ + Sbjct: 1299 NGTDPALVWGKVLELPEKCGFLA---VAGTAVALKAGKLAAVMERQGRVLRICDAEDMKE 1355 Query: 1484 LAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSS 1531 + E A + R L E L+ AG+ Sbjct: 1356 VMAEFVRAFKQGAIYPEQKRLVLKEYPAEA------AEALQHAGYMRE 1397 >UniRef50_A9KJU0 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridiales RepID=A9KJU0_CLOPH Length = 1381 Score = 1021 bits (2640), Expect = 0.0, Method: Composition-based stats. Identities = 432/1532 (28%), Positives = 691/1532 (45%), Gaps = 183/1532 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+F T WF +A +PT VQ + W A LV APTG+GKTL+AFL +D+L R Sbjct: 7 DMFDSVTSRWFQQALGEPTMVQKEAWRSIADGFDTLVSAPTGTGKTLSAFLVYIDQLMR- 65 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE-------VN 125 RE ++ ++Y+SP+K+L D++ NL+ PL GI E ++ + + Sbjct: 66 ---LAREEKLKEEIYVIYVSPLKSLAGDIRENLKKPLHGILGEIIKQEKDSELKKQIIPS 122 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAV 184 + V +RTGDT ER ++ ++PP ILITTPESLYL+LTS+ + L VIIDE+HA+ Sbjct: 123 ISVAVRTGDTTPAERRQMIKHPPHILITTPESLYLLLTSKSGQGMLNTARVVIIDELHAL 182 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 SKRGAHL LS+ RLD L QRIGLSAT+ A +L P +V P + Sbjct: 183 IDSKRGAHLMLSIARLDRLCGQPLQRIGLSATIEPLELAANYLS-PEPAKIVAPTMTKKR 241 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + I P++ + R+ +W I I D + RS I F R Sbjct: 242 KFMITSPLSEEVGI--------------RKTPVWEEIAAIIYDSCCKARSVIAFVEGRRF 287 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AEKL +N+L AR+HHGS+SKEQR Sbjct: 288 AEKLAHYVNQL-------------------------------GGDGFARTHHGSLSKEQR 316 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 EQ+L+ G+LR + ATSS+ELGID+G +D V Q+ P +++S +QR+GRAGH VS Sbjct: 317 LEVEQSLRDGKLRLLCATSSMELGIDVGEIDEVFQIGCPRTISSTMQRLGRAGHNPDRVS 376 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 FPR+ + + + E GR+E+ PP DVLAQ V+ A D +V E Sbjct: 377 VMQMFPRSPIEGLYCGLTAEVAKQGRVEDAKPPRMCFDVLAQHLVSMATGDGYEVQEVLD 436 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 + RA P++++ + L ML+G Y RP+++++R + P +++LAV+ Sbjct: 437 ILARAYPFREVTLKDIHDVLKMLAGDYEHEREIPVRPRILYDRIHDRVEGDPYSRMLAVS 496 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 +GGTIPD+G+Y V EG ++GELDEE VYESRV + LG W+I I +D Sbjct: 497 AGGTIPDKGLYQVKSEEGV------KLGELDEEFVYESRVGEKFLLGTFGWKIVNIQKDA 550 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS---GTIPPWLAEENT 661 VIV PA SA+LPFW+GE GR + G G+ L L+ + + ++ Sbjct: 551 VIVAPASSGSAKLPFWKGEIKGRGLKTGLAFGELLRKLSRANEADCSFEELKAFGMDQAA 610 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 I+ Q ATG +P + +++E +DE G +++++HS +GR V+EP A+ I Sbjct: 611 ATGAGEFIKRQIKATGCLPDDKTILIEHFKDETGSYQMMVHSVFGREVNEPLAILIQEAA 670 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + V DDG + P LP+ + + P L ++ + ++ LF FR Sbjct: 671 SRSLQRVINYVVDDDGFLL-YPYDGQPLPEGLLTMISPALLQGVLEARLIATPLFQITFR 729 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPAL 841 R+++M R G R PLW QR+R +Q+L+ Y P+I ET RECL+D+++LP L Sbjct: 730 YNMGRSMMMGVRKNG-RQPLWVQRMRCAQMLDSILSYESHPIIRETKRECLEDIWNLPGL 788 Query: 842 ERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELL 901 ++ + I++ ++ PSP + MY AP ++ LD+ Sbjct: 789 MHVIHGILSNTIEVREMFLELPSPMSLPFRRQTEGAMMYDY-AP-----STTGILDAS-- 840 Query: 902 RNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHT 961 R L Q + L P+ + +EE +R + E+ L LL G M +L Sbjct: 841 RKALEQANN---LQPEH-KMIEEVSKRAS---LPVNEQELHTLLMIEGDMIAGELKVSI- 892 Query: 962 GSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVS 1021 +L +L++ + AL R E+ +I Sbjct: 893 -------DWLLSLVSEGL---VHYIEPGLWIATEQLELYERALNKRETEACQKI------ 936 Query: 1022 YPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVF 1081 R +R +QL + L ++ + L L +QG V+ Q + + ++ Sbjct: 937 ------LRRAVRYRGGQAVKQLVERYYLPEDVILDNLTSLCDQGSVIK-QGEYYYHTTLY 989 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR 1141 + ++ R+ + + + LL + + + + Sbjct: 990 EKALKLTVYERRDQIKTLPKERFTALLAG-----------------KTEFTASPKEQLSK 1032 Query: 1142 VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHL 1201 V+EQ G SL E+ +LPARV Y ++LD LL+ G + K +G+ + Sbjct: 1033 VLEQFVGSVFQPSLLENVLLPARVAKYRPDLLDALLSQGYFQYRITK-----EGISFHYS 1087 Query: 1202 QEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEA 1261 ++ E+ P+ + +Q + + GA F ++ + K +L EA Sbjct: 1088 EDVDWEASLPSP--EPPLEETEQLLYEAMQKRGASFLNSLTSLLAGK--------SLYEA 1137 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNL 1321 + +L+ +G++ +D + P+R + + + R Q V+ +V + Sbjct: 1138 VLSLLEKGLVCADSFVPIRMWLNNEKLKKGNVR-------------QLVNAKVMVMS--- 1181 Query: 1322 AGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSG 1381 +GR+ + + M E + D+ I+ R+ V + + E + Sbjct: 1182 SGRFEVARPL---KEATMEQKLERLFDQVVIVCRETVRGIS----WAEALKELSVWEYTE 1234 Query: 1382 RIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHY--TPVALSANDPANVWGNLLPW 1439 R RG FVEGL G QF R +D + H + LSA DP +WG P+ Sbjct: 1235 RARRGYFVEGLSGIQFI------REKDFISTMYTLEHPKKEILWLSAMDPYQIWGKYFPY 1288 Query: 1440 PAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE 1499 + + + AG +V +S G + + GK + V+ + A E+F Sbjct: 1289 EKERSFV---QVAGTVVALSSGVPIAVFERQGKTLKVFDFEVLKSALELFVLDYERKCFY 1345 Query: 1500 PRLRFTLTEVNDLPVRQTP--MFTLLREAGFS 1529 P + +++ P +L GF Sbjct: 1346 PNGSRLV-------IKEYPKEAEEVLSAVGFR 1370 >UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkholderia cepacia complex RepID=B1K9C8_BURCC Length = 1518 Score = 1011 bits (2613), Expect = 0.0, Method: Composition-based stats. Identities = 464/1610 (28%), Positives = 670/1610 (41%), Gaps = 234/1610 (14%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA 65 P++ DVF P WF R F PT Q W LV APTGSGKTL AFL A Sbjct: 23 RPAARALDVFHPVVAAWFTRTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTLTAFLCA 82 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 LD L R+ + + ++Y+SP+KAL D+ NL PL GIA+ + G Sbjct: 83 LDDLVRDA--LAHDGTLPDATLVVYVSPLKALSNDIHVNLDAPLAGIAESLAQLGLPVPA 140 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAV 184 +R +RTGDT ER+ L + P +L+TTPESLY++L+S R+ L V +VI+DE+HA+ Sbjct: 141 IRTAVRTGDTTQAERAALRKRAPHVLVTTPESLYVLLSSASGRQMLSNVRSVIVDEIHAL 200 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-----RPVTVVNPP 239 A SKRG+HLALSLERLDAL + RIGLSAT + VA FL G R +V+ Sbjct: 201 ASSKRGSHLALSLERLDALTGRALPRIGLSATQKPIDAVARFLVGGPADAPRDCAIVDTG 260 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 R + + +P ++ V + +W + I HR+T+VF Sbjct: 261 HTRERDLALELPNVPLEPVMAT--------------DVWEQVYDRIAGLAAAHRTTLVFV 306 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE++ L + +HHGS+ Sbjct: 307 NTRRTAERMARHLADRLGKD-------------------------------AIAAHHGSL 335 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 +KE R EQ LK GEL+ +VAT+SLELGID+G VDLV QV +P +A LQR+GR+GH Sbjct: 336 AKEHRFDAEQRLKRGELKLLVATASLELGIDIGDVDLVCQVGSPRGIAPFLQRVGRSGHH 395 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 VGGV KG FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA A Q Sbjct: 396 VGGVPKGRLFPLSRDELVECAALLDCVQRGELDALRIPEAPLDVLAQQIVAEVACAEWQE 455 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 D Y+ RAAP+ L R FD + ML+ + S L + G + R A Sbjct: 456 DALYASFTRAAPYARLARERFDEVMKMLAEGFTS-RRGVRGAYLHRDVVGGTVRGRRNAM 514 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 + A TSGGTIPD Y+VLL +VG ++E+ ES D+ LG S+RI + Sbjct: 515 MTATTSGGTIPDMADYAVLLEPQ-----GIQVGTVNEDFAIESLTGDVFQLGNQSYRIIR 569 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---------------- 643 + +V V A G+S +PFW GEG GR EL +G L Sbjct: 570 VETGRVRVEDAQGQSPGIPFWLGEGLGRSDELSAAVGRLRARLDGLFADGDRQARTNAAK 629 Query: 644 -DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG----------IVPGSRHLVLERCRD 692 +G P A NA G + P R LV + Sbjct: 630 HANVTEAGKTPSRGKSRQAAAETDAPPASPDNAPGGTALAPTESRLAPALRWLVDDLHLS 689 Query: 693 EIGDWRIILHSPYGRRVHEPWAV------AIAGRIHALWGADASVVASDDG--------- 737 +I + Y R + R G V+ S G Sbjct: 690 PDAARQI---ADYLARTRAALGALPTQDTLVIERFFDESGGTQLVIHSPYGSRINRAWGL 746 Query: 738 -----------IVARIPDTDGKLPDAAIF--LFEPEKLLQIVR---------EAVGSSAL 775 + TD + + F +++ + +R +A+ + + Sbjct: 747 ALRKRFCRNFNFELQAAATDDAIILSLSLAHSFALDEVWRYLRSASAEHVLIQALLDAPM 806 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDF 821 F R+R A AL +P T G RT QR+++ LL + P Sbjct: 807 FGVRWRWNATTALALPRFTGGRRTAPQLQRMKSDDLLATVFPDQVACLENIVGEREIPHH 866 Query: 822 PVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQ 881 P++ +TL +CL D D L+RR+ G I++ PSP A +L + + Sbjct: 867 PLVDQTLDDCLHDAMDTDGWLALLRRIESGAIELIARDLPAPSPLAAEIL--NAKPYAFL 924 Query: 882 SDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGL 941 DAPL ERR + D LD I V +E L + + + Sbjct: 925 DDAPLEERRTQAVQSRRWSDPE---TADDLGALDADAIDAVRDEAWPL-----VRDADEM 976 Query: 942 FDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFP---AMISGQERLACMDDAA 998 D L L + ++ A H G E +A E A K P A+ ERL C+ A Sbjct: 977 HDALLTLACVADDE-AHAHAGWPERLAELAERRRATKLATPGGAALWVPVERLVCLR--A 1033 Query: 999 RLRDALGVR---LPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVE 1055 DA +P + + + L D+ L +T + +A L A + Sbjct: 1034 LHPDARATPALKVPAACAQPW--EADAALVDVIRARLTGFGPLTLDAIAAPLGLPPASIA 1091 Query: 1056 EQLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLL 1109 L L +G VM D W + R+ +++ R PV + R L Sbjct: 1092 TALAALEREGYVMRGRFTPGATTDEWCERHLLARIHRYTVKRLRREIEPVERADFMRFLF 1151 Query: 1110 ERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 Q + P T G+ G D + V+EQL G AS WE +LPAR+ DY+ Sbjct: 1152 HWQHLTPDTRGT-------------GRDALAAVVEQLEGYEAAASAWEDALLPARLTDYT 1198 Query: 1170 SEMLDELLATGAVIWSGQKKLGEDDG-------LVALHLQEYAAESFTPAEADQANRSAL 1222 + LDEL +G ++W+ G +V L + +A Q SA Sbjct: 1199 AGGLDELCRSGKLVWTRIGAPARAAGTPVKTTPIVLLPRRHLSAWQALRDPDAQPALSAR 1258 Query: 1223 QQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRAL 1282 + LA GA F + + + L++AL LV G++ +D +A LRAL Sbjct: 1259 ATQVRDALAAHGAMFFDALLDEL------HMLPIELEQALGELVSAGLVNADSYAGLRAL 1312 Query: 1283 TRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPL--------- 1333 + + + S + R RRG + + AGRW+L+Q + Sbjct: 1313 LKPA--VKRSATYAPRTRRGGALI----------GGMDDAGRWALVQRQAPPDDDAPTPK 1360 Query: 1334 -----NDTERMLALAENMLDRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGR 1387 D + + + +L RYG++ + + E + + + + + +E G I GR Sbjct: 1361 RGPTTTDPDALEHIVWTLLRRYGVVFWRLLEREADWLPSWRELVRVLQRLEARGEIRGGR 1420 Query: 1388 FVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLV 1447 FV G G QFA I LR+L Q ++ V ++ DP N+ G LLP PA Sbjct: 1421 FVAGFAGEQFALPEAIPILRELRRQPGDGQY---VCVTGADPLNLAGTLLPGDKVPA--- 1474 Query: 1448 PTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 AG V+ G + L G + +L A R Sbjct: 1475 ---LAGNRVLFRDGVPVASLVSG-----TFHYAPDLPPAAREEARLRLAR 1516 >UniRef50_B8J8Q2 DEAD/H associated domain protein n=3 Tax=Cystobacterineae RepID=B8J8Q2_ANAD2 Length = 1419 Score = 1001 bits (2588), Expect = 0.0, Method: Composition-based stats. Identities = 478/1526 (31%), Positives = 658/1526 (43%), Gaps = 196/1526 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P R WF F PT Q W A LV APTGSGKTLAAFL A+D L ++ Sbjct: 3 DTFHPVVRAWFAGRFGDPTEPQSLAWPQIALRRDVLVSAPTGSGKTLAAFLSAIDGLLQD 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G E +R++Y+SP++ALG D+ RNL+ PL I G LRV +RT Sbjct: 63 GLAGRLE----DRTRVVYVSPLRALGNDIARNLEAPLAEIRAAALEAGLAPPELRVAVRT 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT A R L PP +L+TTPESLYL+LT R RETL GVETVI+DE+HA+AG +RGA Sbjct: 119 GDTTASARRSLLLRPPHLLVTTPESLYLLLTGERGRETLEGVETVIVDEIHALAGDRRGA 178 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 HLALSLERL+AL QRIGLSATV ++VA FL G V P +V Sbjct: 179 HLALSLERLEALARRRPQRIGLSATVEPVAEVARFLVGAPRVGRTGRP------RCSIVE 232 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 V ++ + +W + + V HRST+VF +R LAE+ Sbjct: 233 VGRRRAFDLAIEVPRDELSSVASKELWAETYDRVAEIVRAHRSTLVFVGTRRLAERAAHA 292 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L E +HHGS+S+ +R E+ L Sbjct: 293 LAE-------------------------------RLGEGEVAAHHGSLSRTRRLAAEERL 321 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G L+ VVAT+SLELGID+G VD+V+Q+ +P ++A+GLQRIGRA H GG KG FP Sbjct: 322 KAGALKAVVATASLELGIDVGDVDVVVQLGSPGALATGLQRIGRAAHVKGGTPKGRLFPM 381 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 +R +LV+ A +V + RLE + PLDVLAQQ VA AA A+ D + RRA P Sbjct: 382 SRDELVECAALVRGLRRARLEPVAVRDAPLDVLAQQVVAEAACGAIHEDRLFELCRRAWP 441 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++ L R FDA + MLS + A L + +T R GA++ A+T GGTIPD Sbjct: 442 YRALAREDFDAVVQMLSEGIATSRGRA-SALLHRDGVNRRVTGRRGARIAALTGGGTIPD 500 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ VG+LDE+ ES DI LG TSWRI+++ V V A Sbjct: 501 TAQYAVVAEPE-----GAVVGQLDEDFAVESIAGDIFLLGTTSWRIRRVEAGVVRVEDAH 555 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS-----GTIPPWLAEENTIANIQ 666 G +PFW GE GR L + L + Sbjct: 556 GAPPGVPFWNGEAPGRSGALSAEVSALREELEPRLADPAAAAAWLEAEAALPAAGARQVV 615 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 + R G +P LV ER DE G ++++H+P G R + +A+ R + Sbjct: 616 EYLAAGRAMLGALPTQHTLVAERFFDEAGGMQLVVHAPLGARTNRALGLALRKRFCRTFD 675 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 + A+D+G++ + ++ P L +++ +AV + +F R+R A R Sbjct: 676 FELQAAATDEGVLLSLGPQHAFPLESIFSYVTPATLDEVLTQAVLQAPMFGVRWRWNATR 735 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFPVILETLREC 831 AL +P G R P R+RA LL PD P++ ETLR+C Sbjct: 736 ALAIPRLFKGKRMPPPIARMRADDLLSAVFPAQTACQDNAPGGPIEVPDHPLVRETLRDC 795 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L + D AL ++ R+ GEI++ V T PSP A LL + Y DAPL ERRA Sbjct: 796 LGEAMDAGALRGVLERIAAGEIRLVAVDTPEPSPLAHELL--NARPWAYLDDAPLEERRA 853 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 +++ L + +EE ++ P + + + D L +L + Sbjct: 854 RAVAVRRALPPAEAAAAGALDP------AAIEEVASQVWP--APRDADEVHDALLDLVLL 905 Query: 952 TVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPES 1011 + A A +L+ L A R + + L L + Sbjct: 906 PAGEAAA--------WAPWLDALAAAGRARTVTDGERTWWVATERLGALPLDSVNPLTLT 957 Query: 1012 LPEIYLHRVSYPLRDLFLR------------------------YLRAHALVTAEQLAHEF 1047 ++PL R ++ VTA +LA Sbjct: 958 RSTPLALDSAHPLTLSVGRNAAGVEGRAAPAPAPDPMLAVLRGWMTHLGPVTAARLAART 1017 Query: 1048 SLGIAIVEEQLQQLREQGLVMNL----------QQDIWVSDEVFRRLRLRSLQAAREATR 1097 +L +A E L L +G V+ W V R+ ++ R Sbjct: 1018 ALPLAATEAALAALEAEGRVLRGTFLPGEPWSPDTPHWCERGVLARIHRLTIGRLRREIE 1077 Query: 1098 PVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWE 1157 PV+ + R L Q P T G G++ VI QL G A WE Sbjct: 1078 PVSTAVFLRFLARWQHAAPGT-------------RLHGTSGLLEVIGQLQGFHAAAGAWE 1124 Query: 1158 SQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGL-------------VALHLQEY 1204 +LPARV+ Y +LD L A+G V W DGL V L L+E Sbjct: 1125 RDLLPARVQAYEPRLLDALCASGEVAWGRLHVAPPQDGLPPRRRGAPTRSAPVTLALRED 1184 Query: 1205 AAESFT--PAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEAL 1262 A A+ + +V VLA GA F +++Q +R + GE+ +EAL Sbjct: 1185 LPWLLEATAAGAEPPPLGTIAAELVEVLARRGASFLGELAQAVRTEAGEA------EEAL 1238 Query: 1263 WALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLA 1322 W LV G + D +A LRAL RT Sbjct: 1239 WELVSGGRVACDGFAGLRALVSPPPGHRTR-------------------------PAAAG 1273 Query: 1323 GRWSLLQVEPLNDTERMLA--------LAENMLDRYGIISRQAVIAENIPGGFPSMQTLC 1374 GRW+LL+ P A LA L RYG++ R + E P + + + Sbjct: 1274 GRWALLRAGPPAPGAEADALPEATLEPLARQYLRRYGVVFRDLLAREARPPPWRDLVRVY 1333 Query: 1375 RSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWG 1434 R++E G I GRFV G G QFA +D LR +A + P+ + A DP N+ G Sbjct: 1334 RTLEARGEIRGGRFVSGFSGEQFAAPEAVDALRATRREAAE---DAPLEVCAADPLNLAG 1390 Query: 1435 NLLPWPAHPATLVPTRRAGALVVVSG 1460 L P P PA AG VVV G Sbjct: 1391 ILTPGPRIPA------AAGGRVVVGG 1410 >UniRef50_A9GB61 Putative ATP-dependent helicase, N-terminal n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GB61_SORC5 Length = 1497 Score = 983 bits (2542), Expect = 0.0, Method: Composition-based stats. Identities = 469/1574 (29%), Positives = 673/1574 (42%), Gaps = 221/1574 (14%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P WF F P Q + W V A AL+ APTG+GKTLAAFL+ LDRL R+ Sbjct: 1 MFHPVVDRWFRDRFGAPAPAQERAWPVIAAGRDALISAPTGAGKTLAAFLFCLDRLVRDA 60 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 E + +LYISP+KAL DV RNL+ P+ I+ G +R +RTG Sbjct: 61 ARGALE----DRTDVLYISPLKALSHDVHRNLEQPIAEISAAMEAAGLPAPGIRALVRTG 116 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 D+PAQER + PP +L+TTPES +++LTS R L GV TVI+DEVHA+AG KRGAH Sbjct: 117 DSPAQERRAMAARPPHVLVTTPESAFILLTSASGRRALSGVRTVILDEVHAIAGDKRGAH 176 Query: 193 LALSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 LALSLERL+ L+ QR+GLSATVR A + G R ++ Sbjct: 177 LALSLERLEDLVISQGGARPQRVGLSATVRPIEIAARLVAGAR-------------ELPQ 223 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 +V V D+ ++ A W I I RST+VF N+R L E++ Sbjct: 224 IVDVGQRRDLDLAIEVPRDELGAVCTHEQWTEIYDRIAALAEGARSTLVFVNTRRLVERV 283 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L + +HHGS+S+ +R E Sbjct: 284 AHALG-------------------------------ARLGEDVVAAHHGSLSRARRLSAE 312 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + LK+GELR VVAT+SLELGID+GAVDL V +P S+ LQRIGR+GH + +G Sbjct: 313 RRLKAGELRVVVATASLELGIDVGAVDLACLVGSPRSINVALQRIGRSGHALAATPRGRL 372 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP TR LV+ A IV G L+ +T PLDVLAQQ +AA A + + Y+ VRR Sbjct: 373 FPLTRDQLVECAAIVRAARRGELDRMTSREGPLDVLAQQIIAACACEERDQEGLYALVRR 432 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR---------PGAQ 539 AAP++ L RR FDA + M+SG + D A + R ++ GA+ Sbjct: 433 AAPYEGLSRRDFDAVVAMVSGGAAAADDGASAARGARQRAGSLVYRDAIGGRLRGRRGAR 492 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 L A+TSGG IPD V+L + +VG LDE+ ES D+ LG TSWR+ + Sbjct: 493 LAALTSGGAIPDIAAVDVVL-----QPDGTKVGTLDEDFAIESSGGDVFLLGNTSWRVLR 547 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---------------- 643 + Q+ V A G + +PFW GE R EL + +A Sbjct: 548 LEGGQMWVEDAHGAAPTVPFWLGEAPARTPELSAEVAALRAEVAARLDEERADGARPAAE 607 Query: 644 ------DGAFFSGTIPPWLAEENTIAN-----IQGLIEEQRNATGIVPGSRHLVLERCRD 692 + WL E + ++ IE R A G VP +V+ER D Sbjct: 608 RGQGGEEARAARSRAARWLMEACALDARGALLVRDYIEAGRAALGAVPDGATVVVERFFD 667 Query: 693 EIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDA 752 E G +I++H+P G RV+ +A+ R + + A+DDG++ + G D Sbjct: 668 EAGGQQIVVHTPLGGRVNRALGLALRKRFCRSFDFELQAAATDDGVLLSLSAEHGIPIDE 727 Query: 753 AIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL 812 + L PE L +++ +A +F RFR A+RAL + G R P QR+RA LL Sbjct: 728 VLDLVRPEGLEEVLVQAALQGPMFRTRFRWAASRALALLRFRGGRRVPPALQRMRADDLL 787 Query: 813 EIA----------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 PD P++ E LR+CL ++ D+ L L+ L G I++ Sbjct: 788 LSIFPEQQGCQDNHGLFAHVEPPDHPLVREALRDCLTELMDVEGLRALLVGLRSGAIRVV 847 Query: 857 DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDP 916 + T PS F+ +L F+ DAPL ERRA + + L + ++ LDP Sbjct: 848 ALDTPEPSVFSHEILNANPYAFL--DDAPLEERRARAVRVRRGLPAEVAERLGG---LDP 902 Query: 917 QVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLA 976 QV+ +V E + + + L +LL + + E+ + E Sbjct: 903 QVVAEVVAEAR-----PDVRDADELHELLLDRVALPAEEGIRSGLARHFEALCAAGRAAE 957 Query: 977 VKRIFPAMISGQERLACMDDAARLRD-------ALGVRLPESLP-EIYLHRVSYPLRDLF 1028 V A + R + + A V +P ++ + + L Sbjct: 958 VGAAPGAGVPRAPRWVATERRPLVEVIWPEAVFAPDVAVPPAVRGDAGAVDRGAAITALV 1017 Query: 1029 LRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ----------------- 1071 +L A ++ E LA + + L ++ G + + Sbjct: 1018 RGFLSAAGPISTEDLASRLDVPAYEAQSALARIELAGGALRGRFLPSAPPRPSQAAAGGG 1077 Query: 1072 ----------------------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLL 1109 W + R+ R++ R+A P A R LL Sbjct: 1078 DLSQAAAGGGDLSQAAAGGGDLSIEWCDRHLLARIHRRTVTGLRKAIEPATAAELLRFLL 1137 Query: 1110 ERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 QGV P T G G+ RVIEQL G L A WE +LPARV Y Sbjct: 1138 AWQGVRPGTQA-------------RGPGGLGRVIEQLQGFELAAGAWEQAVLPARVAGYD 1184 Query: 1170 SEMLDELLATGAVIWSGQ----KKLGEDDGLVALHLQEYAAESFTPAEAD----QANRSA 1221 +LD L +G V W + L L+ P EA+ A+ S Sbjct: 1185 EGLLDALCLSGEVAWGRVVPRDAAAPTRAAPITLALRRDLPWLLAPREAEGAPPPASLSE 1244 Query: 1222 LQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRA 1281 Q +++ L GA F ++ + G ++EALW LV G++T D +A LR+ Sbjct: 1245 AAQGVLSFLTRAGASFFDDLAVGVGGVGGAGRSRDEVEEALWELVAAGLVTGDGFAALRS 1304 Query: 1282 LTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP--------- 1332 L + + A + P +GRWSLL+ P Sbjct: 1305 LLGGGAAV--------------ALGAGRLRGGARRGGPVASGRWSLLRSRPDAFAPAAGE 1350 Query: 1333 -LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEG 1391 + + ALA L RYG++ R+ + E P + + + R +E +G++ G V G Sbjct: 1351 DAEGPDVVEALAHQYLRRYGVVCRELLAREPRPPAWRDLLRVYRRLEMAGQLRGGHLVAG 1410 Query: 1392 LGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRR 1451 G FA +D LR + + V LSA DP N+ G + P P PA L Sbjct: 1411 FVGEHFALPEALDALRAVRREPLSGE---IVQLSACDPLNLVGIVTPGPRVPAAL----- 1462 Query: 1452 AGALVVVSGGKLLL 1465 G +V+ G LL Sbjct: 1463 -GNVVIYRDGVPLL 1475 >UniRef50_D2L062 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio RepID=D2L062_9DELT Length = 1472 Score = 966 bits (2498), Expect = 0.0, Method: Composition-based stats. Identities = 473/1549 (30%), Positives = 686/1549 (44%), Gaps = 135/1549 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P WF +PT +Q W A EH L +APTGSGKTL AFL AL+ L Sbjct: 4 LFHPLVARWFSEHVGKPTDIQELAWPRIAAGEHVLAVAPTGSGKTLTAFLSALNSLATGA 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R ++Y+SP+KALGTDV+ NL PL G+ GE LR IR+G Sbjct: 64 WPTGR-------VSVVYVSPLKALGTDVRANLLTPLAGLRRAFAAAGEDFPALRAEIRSG 116 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAH 192 DTP+++R ++ R PP+ILITTPESL L+L+S+ R L V VI+DE+HAVAGSKRG Sbjct: 117 DTPSEDRRRMLRQPPEILITTPESLNLLLSSQGGRGMLTAVRLVILDEIHAVAGSKRGVF 176 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 L ++ERL L QR+ LSATV VAA +GG P ++ P + + IV Sbjct: 177 LLSAVERLAGLAG-EFQRVALSATVSPLETVAAMVGGFVPSGDLSDPVLTPRPVAIVQSR 235 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 A V D R I + + +L +RST+VF NSR EKL + Sbjct: 236 AEKRMDVRVHFAPWPDDRPPRASFI-QILADDVRRRILANRSTLVFVNSRKFCEKLARLI 294 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 N+ +A +HHGS+S+E R E LK Sbjct: 295 ND-------------------------------DQPEILAYAHHGSLSRELRQTVESRLK 323 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 +GEL+ VVAT+SLELGID+GAVD V+ V P +V++ +QRIGR+GH+VG VS+ +F P T Sbjct: 324 AGELKAVVATNSLELGIDIGAVDEVLLVECPPTVSAAVQRIGRSGHRVGEVSRAVFLPTT 383 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 +DL+++AV+ +E + P PLDVLAQ VA ++A VD +Y VR+A P+ Sbjct: 384 EKDLLEAAVMARAAHERDIEPIRPVSAPLDVLAQTLVAMCGVEAWDVDAFYQAVRQAWPY 443 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 +DL RR FD TL ML+GRY + P L + G + AR GA L SGG I DR Sbjct: 444 RDLSRRAFDLTLAMLTGRYAATRIRELAPLLAVDALDGTVAARKGALLRLYASGGVIADR 503 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 G Y++ + + R+GELDE V+E+R+ + GA +WRI++IT V V+PAP Sbjct: 504 GYYALRRQDSDG-----RLGELDEVFVWEARLGQVFAFGAQNWRIERITDADVFVSPAPA 558 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIANIQGL 668 S PFW G+ R +++ FL L D AF I E + G Sbjct: 559 GSVPAPFWLGDARSRDRHFSDLLAHFLEEADVRLDDPAFGEELIRDHCLEPGAAEALLGY 618 Query: 669 IEEQRNATG-IVPGSRHLVLERCRDEIGDW---RIILHSPYGRRVHEPWAVAIAGRIHAL 724 + Q+ ATG +P +RHL++E G ++ILH+P G P A+ + + Sbjct: 619 LRRQKEATGSGLPHARHLLVEVTATGPGGAPGNQVILHAPLGLSRTAPLALVLEAALSRK 678 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 +G V A +D + A +P P + + ++RE + S F A FRE A Sbjct: 679 YGHAIPVFAGNDCVAATLPG--EIDPLDMLEAVPGRAVAGLLRERLEGSGSFGAAFREAA 736 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 RALL+P G R PLW RLRA +LL + DFP++LE R CL D++D LE Sbjct: 737 GRALLLPRDGFGKRQPLWITRLRARKLLAAVASHGDFPMVLEAWRACLVDIFDPAGLEEF 796 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 + G + ++ T SPFA L++ +V E+MY +DA A + +L+ + Sbjct: 797 LAGARSGAVAVTVAHTRVQSPFAADLVWRHVNEYMYLTDAGTV---AGPSGVRPDLVAEV 853 Query: 905 LGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLREL----GPMTVEDLAQRH 960 + + V+ + QRL PG G L + L+E G LA Sbjct: 854 -ARGPSRPAVPQAVVEAYVAKRQRLFPGYAPSGPAELLEWLKERVVVAGDQWQAILAAVA 912 Query: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP------- 1013 EE A L + +A ++ A + AL + P Sbjct: 913 RDHGEEPAVLESALAPKLARLRVPGLAEPLVAALERAPDIARALYGDPALAAPVDPKAKV 972 Query: 1014 ----EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN 1069 + L + +L + ++ +++A + ++ L G ++ Sbjct: 973 PRLAAATAEETAAAREALLVEWLAFYGPLSMDEMAGFLGMPETLLAAVADDLAVAGRWVS 1032 Query: 1070 L------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPA 1123 + +W F L + A R + A+ L QG+ Sbjct: 1033 GELVSGREGTLWCDAGSFETLLRLARAARRPGLAALPASRLPYFLARWQGLARPAGD--- 1089 Query: 1124 LFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVI 1183 +G+ +E+LA + L A LWE+ +LPAR R Y LD L T + Sbjct: 1090 ------------AEGLAEHLERLACLPLAAGLWEADVLPARCRAYDPAWLDAALETTGLA 1137 Query: 1184 WSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQ 1243 W G V + + A +A + + Sbjct: 1138 WFGAGP-----KKVLFARPDDLDLAGFSPPAPDPGLFPDPRA---------GYDFSTLLD 1183 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 + +AL E LW W+G T + A LR R + T S+ A R Sbjct: 1184 I------TGLSPTALAERLWQAAWKGQATCNSLAVLR---RGVATDFTPEAASYEASRQG 1234 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWSLLQV-----EPLNDTERMLALAENMLDRYGIISRQAV 1358 + +P LAG W +V +P+ E + A +L RYG++ R + Sbjct: 1235 RRSLRRTNPARYAAALPLAGSWRQPRVPEPPDDPVAREELAMDRARLLLARYGVVCRDVI 1294 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 E P + + R ME SG ++ G F GL G QFA + R LA T Sbjct: 1295 GREAAPFAWAGIFRALRRMELSGEVVSGEFFAGLSGPQFATGRAV---RLLAEGLPGTDA 1351 Query: 1419 YTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 + + DPA +WG PA +P R AG+ V +G +L L GG ++ Sbjct: 1352 W---WCAGRDPAALWGL---GPAGEGLPLPRRAAGSYVAFAGSSPVLALEAGGGRLSTVL 1405 Query: 1479 EKEELLAPEVFHALTTALRR--EPRLRFTLTEVNDLPVRQTPMFTLLRE 1525 + PE L L R P R + +N P ++P +LR+ Sbjct: 1406 PPDAAALPEALAPLVHLLTRRVRPEARVAVLTINGGPAGESPYVPVLRQ 1454 >UniRef50_B3DRA3 Lhr-like helicase n=11 Tax=Bacteria RepID=B3DRA3_BIFLD Length = 1577 Score = 964 bits (2491), Expect = 0.0, Method: Composition-based stats. Identities = 523/1095 (47%), Positives = 661/1095 (60%), Gaps = 126/1095 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T+ WF AF QPT Q Q W + LVIAPTGSGKTLAAFL A+DRL Sbjct: 7 LFSEPTKMWFEHAFGQPTEAQAQAWPAIHSGRNVLVIAPTGSGKTLAAFLSAIDRLM--- 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 T +R R+LYISP+KAL DV +NL+ PL+GIA + +G + V R+G Sbjct: 64 ---TVPRTRRAGVRVLYISPLKALAADVAKNLEQPLEGIAAQCEAQGLPVPKIAVATRSG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT AQER ++ +PPDIL+TTPESLYL+LTS+A L V+TVI+DE+HAVAG+KRGAHL Sbjct: 121 DTTAQERRRIASHPPDILVTTPESLYLLLTSKAGRILGTVDTVIVDEIHAVAGTKRGAHL 180 Query: 194 ALSLERLDALL--------------------------HTSAQRIGLSATVRSASDVAAFL 227 A+SLERL+ L+ QRIGLSATV A FL Sbjct: 181 AVSLERLENLVTESRKRDAIDADADEGGDAAVDAGRGDRHMQRIGLSATVNPPEKAARFL 240 Query: 228 GGDRPVTVVNPPAMRHPQI----------------------------------------- 246 GG +PVT+VNP + Sbjct: 241 GGGQPVTIVNPGGRPAMDLRMIEPLENMRDLQSVNAKQRVGGVDAERSAPHISGVTPAMQ 300 Query: 247 -----RIVVPVANMDDVSSVASGTGEDSHAGRE-----------GSIWPYIETGILDEVL 290 R +VPV + D S+ + GSIWP +E ILDE+L Sbjct: 301 RLAERRGIVPVDDRDVSSTSGDDSDASDAFDSSALVGAAGDRTSGSIWPVVERSILDEIL 360 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYA-ARLQRSPSIAVDAAHFESTSGATSNR------ 343 HR+T+VF NSRG+AEKLTARLN+LYA R +P D E G +++ Sbjct: 361 AHRTTLVFVNSRGVAEKLTARLNDLYAQTRHGTNPDTVRDLGSPEGREGFSTHYDAVVGS 420 Query: 344 ------VQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 D IA +HHGSVSK++R + E+ LK GELRCVVATSSLELGIDMG+VDLV Sbjct: 421 TTMLVGSHEGDDVIAMAHHGSVSKDRRKMIEERLKRGELRCVVATSSLELGIDMGSVDLV 480 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 IQV TPLSV+SGLQR+GRA HQVGGVS LF+P TR+ +V A +E M AG +E L P Sbjct: 481 IQVDTPLSVSSGLQRVGRADHQVGGVSHALFYPLTRQQIVTGAASLEAMIAGDIEPLAVP 540 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 NPLD+LAQQTVAAAAM L D+WY+ VRRAAP+ +LPR +FDA + M+SG Y S +FS Sbjct: 541 RNPLDILAQQTVAAAAMHDLNADDWYATVRRAAPFAELPRDMFDAVIGMMSGEYNSEEFS 600 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 AFRP+LVWNR+ G+++ARPG+Q +AVTSGGTIPDRG+Y+V+LPE + G RRVGELDEE Sbjct: 601 AFRPRLVWNRDNGLISARPGSQKVAVTSGGTIPDRGLYTVVLPEADAGKGQRRVGELDEE 660 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 MVYESRV D+ITLG ++W+IQ+ITRD+V+VTPAPGR+ARLPFW GEG GR I Sbjct: 661 MVYESRVGDVITLGTSTWQIQEITRDRVVVTPAPGRTARLPFWHGEGAGRDYGFSRTIAR 720 Query: 638 FLHLLADG----------AFFSGTIPPW-----------LAEENTIANIQGLIEEQRNAT 676 F +A G A +P + + N I N+ L+ EQ+ AT Sbjct: 721 FTREIAAGLDVKRTEGRSAAEGPAVPTFIPTILTRLHHDGLDANAITNLARLLSEQQAAT 780 Query: 677 GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDD 736 G VP + L++ER RDE G WRI+L SP+GRRVHEPW++AI+ R+ +G D V A+DD Sbjct: 781 GAVPSDQTLIVERTRDEDGGWRIVLLSPFGRRVHEPWSMAISRRLRQRYGFDGQVYAADD 840 Query: 737 GIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPG 796 GIV ++PD DG +P +FLF+PE L V VG S LFAARFRECAAR+L MP PG Sbjct: 841 GIVIQLPDGDGHIPAQDLFLFDPEDLKADVERQVGESVLFAARFRECAARSLFMPRSDPG 900 Query: 797 HRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 R PLWQQRLRA+QLL+ A+ +FP++LET RECLQDVYD+PAL +M L G I + Sbjct: 901 RRVPLWQQRLRAAQLLQSARMAKNFPLLLETARECLQDVYDMPALNEVMTGLQAGTITVK 960 Query: 857 DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDP 916 DV T +PSPFA ++LFG+V MYQ D P AER A +LSLD +L LLG D ++L+P Sbjct: 961 DVETESPSPFAENILFGFVGVVMYQYDQPQAERSAQLLSLDPHVLERLLGATDMAQVLNP 1020 Query: 917 QVIRQVEEELQRLAPGRRAKGEE---GLFDLLRELGPMTVEDLAQRHTGSSEEVASYLEN 973 VIR+VE+EL ++ + + GP T + L + + L+ Sbjct: 1021 DVIREVEQELGEHTFWNELADDDVTGRVTRYAKTHGPFTADQLIADLHLDATDAVHTLDV 1080 Query: 974 LLAVKRIFPAMISGQ 988 L A + Sbjct: 1081 LAAKGELLQGHFVDD 1095 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 187/565 (33%), Positives = 276/565 (48%), Gaps = 69/565 (12%) Query: 1016 YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL----- 1070 + + RY + H TA+QL + L L L +G ++ Sbjct: 1036 WNELADDDVTGRVTRYAKTHGPFTADQLIADLHLDATDAVHTLDVLAAKGELLQGHFVDD 1095 Query: 1071 --QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 Q W+ +VFRR+R RSL AR+A +PV + + L++RQG+ P Sbjct: 1096 DEQGQQWLHKDVFRRIRSRSLAKARKAVKPVESEAFQMFLIDRQGIGPVGGE-------- 1147 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 YEG DG+MRVIEQL G+ LP +LWES + PARVRDY +LDELL +G V+W G K Sbjct: 1148 ---RYEGADGLMRVIEQLEGISLPTALWESAVFPARVRDYQPALLDELLTSGDVVWVGSK 1204 Query: 1189 KLGE---DDGLVALHLQEYAAESFTPAEADQ-ANRSALQQAIVAVLADGGAWFAQQISQR 1244 G D G VA + + S A+ + + +AI+ L GGA+ A+Q+ Sbjct: 1205 TGGTSAMDPGEVAFYPADSILFSGVEHGTTSNASDATMPEAILTALDSGGAFHARQLMDA 1264 Query: 1245 IRDKIGESVDLS----------------ALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 + E+ + ++ALW+LVWQG +T+ +AP+RALT +++ Sbjct: 1265 AKRAWNETAEPDINPNTGEIIPQEWSEQQFKDALWSLVWQGKVTNSSFAPVRALTAGAAS 1324 Query: 1289 ARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL----QVEPLNDTERMLALAE 1344 R ST R R R + L G WS + + E + TER LAL E Sbjct: 1325 PRKSTTSRRRGR--------VAPIRRATTDMTLGGLWSAVIGQAEAEDTDQTERALALVE 1376 Query: 1345 NMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTID 1404 +LDRYG+I++ + ENIPGG+ ++ + ME+ GR++RG FV G G AQFAER T+D Sbjct: 1377 TLLDRYGVIAQPVIDKENIPGGYSALYPVLNRMEEHGRLVRGMFVRGFGAAQFAERDTVD 1436 Query: 1405 RLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATL-VPTRRAGALVVVSG--- 1460 LR ++ R + VALS DPAN+ G+ + WP PA P RR GA VV++ Sbjct: 1437 ALR----HPSEHRGQSVVALSVLDPANLSGSAIAWPDAPAGAGKPARRIGATVVLNAQGA 1492 Query: 1461 --------GKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDL 1512 L + G + V E++ + L AL+R T +++N Sbjct: 1493 LLYAAAKAKHLTAFDQSVGHEAAVNDSDEQM--RKAATELAYALKRNGTGSVTFSDINGE 1550 Query: 1513 PV-RQTPMFTLLREAGFSSSPQGLD 1536 P+ + P +L ++GF+ PQG+ Sbjct: 1551 PLNARHPFARILHQSGFTPVPQGMR 1575 >UniRef50_A0LV08 DEAD/H associated domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LV08_ACIC1 Length = 1534 Score = 915 bits (2365), Expect = 0.0, Method: Composition-based stats. Identities = 490/1072 (45%), Positives = 662/1072 (61%), Gaps = 55/1072 (5%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F+P R WF F PTA Q + W V A +HAL+IAPTGSGKTLAAFL+++ RL E Sbjct: 1 MFTPLLRRWFTTTFGAPTAAQAEAWRVIAGGDHALLIAPTGSGKTLAAFLWSIHRLLTE- 59 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + +R+LY+SP++AL D++RNL+ PL I G ++R+G+RTG Sbjct: 60 -----PRAEPPAARVLYVSPLRALAADIERNLRAPLTAIRRLATETGVQLPDIRIGVRTG 114 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTP+ +R L +NPPDILITTPESL+L+LTS+AR+ LRGV+TVIIDE+HA+AG+KRGAHL Sbjct: 115 DTPSAQRRALVKNPPDILITTPESLFLLLTSQARDMLRGVDTVIIDEIHALAGNKRGAHL 174 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALS+ERL+ALL AQRIGLSATVR ++ A FLGG RPV V++P A + IR+ VPVA Sbjct: 175 ALSMERLEALLRRPAQRIGLSATVRPPAEAARFLGGGRPVRVIHPSARKELDIRVSVPVA 234 Query: 254 NMDDVSSVASGTGE--DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 +M G + D+ SIWP+I T ++D + HRSTIVFTNSR LAE+LTA+ Sbjct: 235 DMTSPPDPPPGAADEPDADTPARSSIWPHIVTRLVDLITAHRSTIVFTNSRRLAERLTAQ 294 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 LN+ A R +AR+HHGSVS+EQR +TE+ L Sbjct: 295 LNDEAARRGIPGE--------------------------LARAHHGSVSREQRHVTEELL 328 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 KSG + VVATSSLELGIDMGAVDLV+ P SVA+ +QR GRAGHQ VS+G+ FP+ Sbjct: 329 KSGRIPAVVATSSLELGIDMGAVDLVVHAEPPPSVAAAMQRFGRAGHQRDAVSRGIIFPK 388 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 R L+ +AV+VE M GR+E + P NPLDVLAQQ VA AA D D+ ++ VRRAAP Sbjct: 389 HRSQLIPAAVVVERMRDGRIEAVRVPENPLDVLAQQLVAMAATDDWSDDDMFTLVRRAAP 448 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 + L VFDA L ML+GRY S DF+ F+ ++ W+R +G +TARPGA+LLAVT+ GTIPD Sbjct: 449 FHTLRPNVFDAVLAMLAGRYASDDFAQFKARIDWDRSSGRVTARPGARLLAVTNAGTIPD 508 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 RG Y+V+L ++ RVGELDEEMVYESR + TLG+ WRI IT D+V+V PAP Sbjct: 509 RGQYTVVLAGADKPT---RVGELDEEMVYESRPGTVFTLGSAQWRIVDITADRVVVVPAP 565 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIANIQGLI 669 G +A PFW G+ RP +LG IG+ L +L+ D + + +E + N + Sbjct: 566 GAAAIPPFWHGDAPARPFDLGRAIGETLRVLSSTDQVTATAALRDAGFDELAVNNALRYL 625 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 +QR ATG+VP + +V+E RDE+GDWR+++HSP+G +VH PWA+AIA RI +G + Sbjct: 626 ADQRAATGVVPDDQTIVVEWFRDEVGDWRLVVHSPFGGQVHAPWALAIAARIRQRYGIET 685 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 +V+ +DDGIVAR+P D PD + +P++ +R + +SALFAA+FRECAARALL Sbjct: 686 AVMHADDGIVARLPAADRP-PDLDLVTIDPDEAADAIRGELTNSALFAAKFRECAARALL 744 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 +P R P RTPLWQQR RA+QLL A PDFP++LE +REC +V+D+P L+R++R + Sbjct: 745 LPRRFPQRRTPLWQQRQRAAQLLSAAVDLPDFPIVLEAVRECWHEVFDVPGLQRILRDIA 804 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD 909 I + V T PSPFA SLLFGY+A ++Y++D P AER+ L+LDS LL LLG+ D Sbjct: 805 AHRIAVVGVETPVPSPFARSLLFGYLAAYLYENDVPPAERKVHALALDSALLTQLLGEHD 864 Query: 910 PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVAS 969 E+LDP ++ VE+EL L ++ + GP + DLA ++ + Sbjct: 865 FAEILDPGIVAAVEQELASLPQSPTPTLDDAVRAFAARRGPFSRRDLAAALAADDRQLDA 924 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLR-----DALGVRLPESLPEIYLHR---VS 1021 L++ + + + +G+ A + R R A +P +L V Sbjct: 925 VLDHFVTTGVLVRSG-AGEYCDADILRTLRRRSLAKLRAEIEPVPARAFARFLPSWQHVR 983 Query: 1022 YPLRDLFLRYL---RAHALVTAEQLAHEFSLGIAIVE---EQLQQLREQGLV 1067 PL + Y + + L I L +L G V Sbjct: 984 RPLTGVDGLYAVIEQLRGARLPASELEQAILARRIAGYHPALLDELTASGAV 1035 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 172/557 (30%), Positives = 234/557 (42%), Gaps = 60/557 (10%) Query: 996 DAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVE 1055 D A + D V E + L D + + LA + ++ Sbjct: 864 DFAEILDPGIVAAVEQELASLPQSPTPTLDDAVRAFAARRGPFSRRDLAAALAADDRQLD 923 Query: 1056 EQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVL 1115 L G+++ + ++ R LR RSL R PV A +AR L Q V Sbjct: 924 AVLDHFVTTGVLVRSGAGEYCDADILRTLRRRSLAKLRAEIEPVPARAFARFLPSWQHVR 983 Query: 1116 PATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDE 1175 GVDG+ VIEQL G LPAS E IL R+ Y +LDE Sbjct: 984 RP---------------LTGVDGLYAVIEQLRGARLPASELEQAILARRIAGYHPALLDE 1028 Query: 1176 LLATGAVIWSGQKK-----------------LGEDDGLVALHLQEYAAESFTPAEADQAN 1218 L A+GAV W+G G DG + L + AA P Sbjct: 1029 LTASGAVTWTGAGARTGSGTRGAGARSGAGTNGPADGWIVLCPTDAAASLLPPPMPLD-E 1087 Query: 1219 RSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAP 1278 L + +V +LA GA F + I+ R+R +D L+ ALW LV+ G +T+D AP Sbjct: 1088 LPVLHRHVVDLLASSGALFFRTIADRVR-----CLDDQELERALWDLVFAGWLTNDTLAP 1142 Query: 1279 LRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTER 1338 LRA +R R +R G P AGRWSL+ ++ R Sbjct: 1143 LRARLTQRPGSRPRGRPILPSRLG---------------PPTAAGRWSLIGARESDEERR 1187 Query: 1339 MLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFA 1398 ALA+ +LDRYG+ +R V AEN+ GGF + + +ME +G RG FV LGGAQF Sbjct: 1188 ARALAQALLDRYGVAARPVVEAENVRGGFGGIYPVLATMEAAGACRRGYFVTALGGAQFG 1247 Query: 1399 ERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVV 1458 ID LR A P+ L+A DPAN +G LPWP + RR A VV Sbjct: 1248 VSGAIDALR-----AANRETAGPLVLAAADPANPYGAALPWPEGSSG-RVGRRPEAWVVT 1301 Query: 1459 SGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTP 1518 G +LY+ GG+ + V + L + ++R R L VN P+ TP Sbjct: 1302 VDGAPVLYVESGGRGIDVLTADADALLAAIEAL-AASVRAGETGRLQLERVNGRPILGTP 1360 Query: 1519 MFTLLREAGFSSSPQGL 1535 + LR+ GF +P GL Sbjct: 1361 LAETLRDKGFRPTPPGL 1377 >UniRef50_D2MKC9 DEAD/H associated domain protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKC9_9BACT Length = 1346 Score = 906 bits (2342), Expect = 0.0, Method: Composition-based stats. Identities = 376/1260 (29%), Positives = 571/1260 (45%), Gaps = 154/1260 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F P WF + PT VQ +W EHAL+ APTGSGKTLAAFL ++D LF++ Sbjct: 17 ESFHPIIARWFRDSIGTPTDVQTASWPALCSGEHALIAAPTGSGKTLAAFLASIDSLFQQ 76 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + H ++ILY+SP+KAL DVQ+NL+ PL I+ G +RV +RT Sbjct: 77 ALSNDLANH----TQILYVSPLKALSNDVQKNLRRPLSEISGNALEAGLLLPEIRVEVRT 132 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP + R + R PP ILITTPESL+L+LT ++RE LR + TVI+DE+HA+AG+KRG+ Sbjct: 133 GDTPTKTRQDMLRRPPHILITTPESLFLLLTARKSREILRTIRTVIVDEIHALAGNKRGS 192 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 H+ALSLERLDA+ H RIGLSAT + +A FL G + + P +V Sbjct: 193 HVALSLERLDAIAHVKPNRIGLSATQKPLEAIARFLTGGTSHISEDQAPIWTPTSCHLVD 252 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + ++ ++ A +IW + + + V HRST+VF N+R LAE++ + Sbjct: 253 MGQRREMDLAIETPRDELGAIATNAIWADVYDRLTELVQTHRSTLVFVNTRRLAERIAHQ 312 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L + L +HHGS+S++ R E+ L Sbjct: 313 LTDRLGEDL-------------------------------VAAHHGSLSRKMRLWAEERL 341 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K G+ R V+AT+SLELGID+G VDLV QV +P ++A+ LQR+GRAGH V + KG Sbjct: 342 KKGQTRVVIATASLELGIDIGFVDLVCQVGSPRAIATCLQRVGRAGHWVDAIPKGRLLCT 401 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 TR +LV+ A ++ + G L+ + P +P D+LAQQ +A + VD Y + +A P Sbjct: 402 TRDELVECAALIRAIHLGHLDQILVPQDPKDILAQQLIAEVSAQEWPVDSLYQQYTQAYP 461 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++ L R FD + +++ + S + L +R L AR GA+L A+TSGG IPD Sbjct: 462 YRHLTRTAFDEVVTLVTQGWTSNRGKQ-QALLFHDRAQNRLRARRGARLAAITSGGAIPD 520 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ VG +DE+ ES DII LG TSWRI+ + + V A Sbjct: 521 TATYAVIAEPQ-----GNTVGSVDEDFAVESLAGDIILLGNTSWRIRGVETGVMRVEDAH 575 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE- 670 G +PFWRGE R EL + + + + D + P + ++ +I E Sbjct: 576 GAPPTIPFWRGEAPSRTFELSQEVAELRQAVVDRLTPPTSTSPATSGQDPHDHILRWFES 635 Query: 671 ---------EQRNA--------TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 EQ A G VP R ++ ER DE G ++++HSP+G R++ W Sbjct: 636 ECGADRRATEQILAYHQSGVHMLGAVPTQRTIIAERFFDEAGGMQLVIHSPFGGRINRAW 695 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 +A+ R + + A+D+G+V + + + L + +++ +AV S Sbjct: 696 GLALRKRFCVSFDFELQAAATDEGLVLSLGERHSFPLETVWSLLRSSNVREVLTQAVLQS 755 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGY 818 +F AR+R +RAL + G R PL QR+RA LL Sbjct: 756 PMFMARWRWNVSRALAVLRFRNGKRVPLHLQRMRAEDLLTAVFPMATACQDNRPPGNIDV 815 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 P P++ ETLR+CL++ ++ L L++R+ G++ + + TPSPF+ +L F Sbjct: 816 PSHPLVQETLRDCLEEAMNIDGLTVLLQRIERGDVHCLSIESPTPSPFSHEILNANPYGF 875 Query: 879 MYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE 938 + DAPL ERR+ +S+ L + LD I V +E R + Sbjct: 876 L--DDAPLEERRSRAVSMRHILPP---AEAATMGALDADAIEAVCQEAW-----PRVRDA 925 Query: 939 EGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQER--LACMDD 996 + L + L L + E ++L +LL R + R + Sbjct: 926 DELQEALHL--------LTWVPENHAAEWRAFLPDLLDSGRALVLSHTDPTRDSTVSIWT 977 Query: 997 AARLRDALGVRLPESLPEIYLHR------------VSYPLRDLFLRYLRAHALVTAEQLA 1044 L LP H+ + ++ TA +LA Sbjct: 978 TPDHLSLLATILPHLAAHPDAHQCESRSSPVFSGDEQEARTTIVRSWMEVIGPTTARELA 1037 Query: 1045 HEFSLGIAIVEEQLQQLREQGLVMNLQ--------------------------------- 1071 + L+QL QG ++ Sbjct: 1038 ATLRWPATTTQTALEQLEAQGQILQGTFRPRVRHVPSSASGLETEPHLSFRGSEQEHDSK 1097 Query: 1072 -QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSP 1130 + W + R+ R++ R + V+A+ + R L Q V P Sbjct: 1098 PEIEWCDRRLLARIHRRTVLTLRREVQTVSASDFMRFLFRWQHVAPTA------------ 1145 Query: 1131 GVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL 1190 G G+ ++EQLAG AS WE +L +R+ DY + LD L G + W + Sbjct: 1146 -RLHGEPGLRTILEQLAGFEAAASAWEPHLLRSRMADYRPDTLDYLCLRGIITWGRLTQP 1204 >UniRef50_D1NRV9 ATP-dependent helicase II n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NRV9_9BIFI Length = 1644 Score = 897 bits (2319), Expect = 0.0, Method: Composition-based stats. Identities = 504/1387 (36%), Positives = 713/1387 (51%), Gaps = 139/1387 (10%) Query: 225 AFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETG 284 L + T + P+ + Q + + SIWP ++ Sbjct: 319 QRLAARKAETAADSPSAQALQAAQRFTAHAAMPAPHHGLPMDASATTQKTFSIWPQVQRS 378 Query: 285 ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA------------H 332 +LD +L HR+T+VF NSRG+AE+LTA++N+LYA R+ A+D A H Sbjct: 379 VLDMILEHRTTLVFVNSRGVAERLTAQINDLYAQRVNAGRGDAIDTAWGQHGDGPDEPMH 438 Query: 333 FESTSGATSNRVQSSDVF--IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGID 390 S+ G+TS V S + +A +HHGSVSK++R E LK G+LRCV+ATSSLELGID Sbjct: 439 RRSSYGSTSMLVSSPEPEATLAMAHHGSVSKDRRKQIEDDLKRGKLRCVIATSSLELGID 498 Query: 391 MGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGR 450 MG+VDLVIQ+A PLS++SGLQR+GRA H VGG S +F+P TR+++V + VE M +G Sbjct: 499 MGSVDLVIQIAPPLSISSGLQRVGRADHTVGGTSHAVFYPLTRQEIVATGTAVEHMRSGS 558 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR 510 LE N LDVLAQQTVAAA+++ + VD WY+ VR+AAP+ L R VF+ + +L+G Sbjct: 559 LEPTMMVRNALDVLAQQTVAAASVEPVSVDTWYALVRKAAPYAGLGRDVFETVIKLLTGA 618 Query: 511 YPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR 570 Y S +FSAFRP L+ + ++G+++ARPGAQ LAVTSGGTIPDRG+Y+V+LPE + G +R Sbjct: 619 YNSEEFSAFRPPLMLDEDSGMISARPGAQRLAVTSGGTIPDRGLYTVVLPEAQAGKGPKR 678 Query: 571 VGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAE 630 VGELDEEMVYE+RV DIITLG ++W++Q+IT D+V+V PAPGRSARLPFW G+ GR Sbjct: 679 VGELDEEMVYETRVGDIITLGTSTWQVQEITNDRVVVIPAPGRSARLPFWHGDQAGRSYT 738 Query: 631 LGEMIGDFLHLLADGAFFS----------------GTIPPWLAEENTIANIQGLIEEQRN 674 G ++H + G + + ++N I ++ G + +QR Sbjct: 739 FGLAQAQWMHDMNAGFLAATNNGTATEPTFNDETLERLHNDGFDDNAINDLAGFLADQRA 798 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 AT ++P + +V+ER R E GDW +++HS GRRVHEPWA+AI R+ +G + A+ Sbjct: 799 ATTVIPDATRIVVERTRSEEGDWTVLIHSQLGRRVHEPWALAINARLQQRYGFSGQIFAA 858 Query: 735 DDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRT 794 DDGIV R+PD DG + F+ + L +IV E VG S LFA+RFRE AAR+L MP Sbjct: 859 DDGIVIRLPDGDGTIDVIGSIRFDVDDLNRIVTEQVGGSVLFASRFREVAARSLFMPRMN 918 Query: 795 PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 PG R PLWQQRLRASQLL A+ DFP+I+ET RECLQDVYDLPAL +M R+ G+I Sbjct: 919 PGKRVPLWQQRLRASQLLAAARPIKDFPLIMETTRECLQDVYDLPALREVMGRIGAGQIM 978 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 I +VTT PSP A +L+FG+V MY+ D PLAER +LS+D +L LLG+ D +L Sbjct: 979 IDEVTTDYPSPMAENLMFGFVGSVMYEGDTPLAERNTQLLSMDPAMLEQLLGEADYASVL 1038 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDL-------LRELGPMTVEDLAQRHTGSSEEV 967 D + I + L GR D+ + P T + +E Sbjct: 1039 DSESIDETARAL----EGRTFWNALDEQDITGRVSRYAKTHAPFTAAQMIADLNIDAEAA 1094 Query: 968 ASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDL 1027 L+ L + + + + + VS Sbjct: 1095 VRALDALKERGEVLQGRFDARMSEDVEQWVHQSVFRMIRSRSLRRARAAIRPVSAADYQR 1154 Query: 1028 FLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLR 1087 FL L+ V ++ V L+Q + L +W + R+R Sbjct: 1155 FLLDLQGVGPVGGQRHDDTEG-----VLRVLEQCEG----VELPLHVWEGSVLPARVRNY 1205 Query: 1088 SLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLA 1147 + L+LE V + + + S + V EQ Sbjct: 1206 T------------HAMLDALVLEGTVVWVMGERGVRWYPADSVQLASWAARVHEQAEQAG 1253 Query: 1148 GVGLPASLWESQILPARVRDYSSEMLDELLAT---GAVIWSGQKKLGEDDGLVALHLQEY 1204 A L S LD ++A G W+G + E Sbjct: 1254 SADTDADL--------------SSALDSVVAGESNGE--WNGDGE------------TEV 1285 Query: 1205 AAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIR------------DKIGES 1252 A AD RS L +AI+AVLA GGA+ A Q++ + D GE Sbjct: 1286 QAWL-----ADDTCRS-LCRAILAVLAQGGAYGASQLADLVNERWMDVCEPLVDDGTGEL 1339 Query: 1253 VDLS----ALQEALWALVWQGVITSDIWAPLRA-----------LTRSSSNARTSTRRSH 1297 V + +++LW LV QG++T+ +RA ++ ++ + R +H Sbjct: 1340 VMPAWTMERFEQSLWRLVRQGLVTNSALEAVRAHETADAGTSSAGGAAAGRSKAAARSAH 1399 Query: 1298 RARRGRPVYA-QPVSPRVSYNTPNLAGRWSLLQVE-----PLNDTERMLALAENMLDRYG 1351 R R V + + P T LAG W L+ + ++ +R + L E +LDRYG Sbjct: 1400 SVRSMRSVRSIRHRLPARMPQTKTLAGLWRLVTGDQELAAEVSAEQRTIDLVEMLLDRYG 1459 Query: 1352 IISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLAT 1411 I+ V +PGGF S+ + ME+ G ++RG FVEG G AQFA R T+D LR + Sbjct: 1460 PIAPALVDMAGVPGGFSSLYPVLTRMEERGLLVRGMFVEGFGAAQFAVRDTVDVLRGI-- 1517 Query: 1412 QATQTRHYTPVALSANDPANVWGNLLPWPAHPATL-VPTRRAGALVVVSGGKLLLYLAQG 1470 + T H V L+A DPA ++G +PWPA P P R+ G+LVV+ G +++ A Sbjct: 1518 --SATTHAHAVVLNAIDPAVLYGAAVPWPALPDDAGKPLRKDGSLVVLRDGVPIVFAALR 1575 Query: 1471 GKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR-QTPMFTLLREAGFS 1529 GK+++ + E LL L + T T N P+R P+F LR AGF+ Sbjct: 1576 GKRLMAFSTVESLLESACAE-LAYQCHQTLGAPVTFTVCNAQPIRVGQPIFHALRAAGFT 1634 Query: 1530 SSPQGLD 1536 +PQG+ Sbjct: 1635 PTPQGMK 1641 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 138/261 (52%), Positives = 168/261 (64%), Gaps = 26/261 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG- 73 F+ T+ WF + F +PT VQ Q W + LVIAPTGSGKTLAAFL ALD + E Sbjct: 8 FTQQTQRWFEQTFGKPTDVQRQAWPLIRSGADTLVIAPTGSGKTLAAFLAALDTIMCERA 67 Query: 74 -------------------------GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIP 108 +++ K K R+LYISP+KALG DV +NL +P Sbjct: 68 RSVSGAVQPRIDHVDLVEDAPQTAKPARSKQRAKTKGVRVLYISPLKALGVDVAKNLDLP 127 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE 168 L+GI+DE G +RV +R+GDT A+ R+ +TR PPDIL+TTPESLYLMLTS+ARE Sbjct: 128 LRGISDEYAAEGLEVPEVRVAMRSGDTDAKARAAITRRPPDILVTTPESLYLMLTSKARE 187 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 LR V+TVIIDEVHAVAG+KRG+HLALSLERLDALL AQRIGLSATV + AAFLG Sbjct: 188 ILRHVDTVIIDEVHAVAGTKRGSHLALSLERLDALLEHPAQRIGLSATVHPMEETAAFLG 247 Query: 229 GDRPVTVVNPPAMRHPQIRIV 249 G RPV +VN +R+V Sbjct: 248 GSRPVQIVNAAGAPSVDLRVV 268 >UniRef50_D2LLH6 DEAD/H associated domain protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LLH6_9EURY Length = 1688 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 298/960 (31%), Positives = 480/960 (50%), Gaps = 92/960 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF + + T Q + ++ LV +PTGSGKTL AF+ ++ LF Sbjct: 16 LFDPIIGEWFTSKYSELTEPQAYAIPLIHSGKNVLVSSPTGSGKTLTAFISIINELF--- 72 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 +E +Y+SP+KAL D+ RNL++PL+ I D + +G +RV +R+G Sbjct: 73 -LLAKEGKLEDKVYCVYVSPLKALANDIHRNLEVPLEEIKDLAKSKGVKIPKIRVAVRSG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT ER K+ R PP I ITTPESL L+LT + RE+ R V VI+DE+H +A +KRG Sbjct: 132 DTSTAERQKMLRKPPHIFITTPESLSLVLTAPKFRESFRDVRYVIVDEIHELANNKRGVM 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIR 247 L+L+LERL L + QRIGLSAT ++A +L G R V++V + ++ Sbjct: 192 LSLNLERLQYLA-KNFQRIGLSATQAPIEEIAKYLVGYEGEEPRNVSIVEVEVRKKLDLK 250 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 ++ PV ++ V + + ++D + RHR+T++FTN+R E Sbjct: 251 VITPVEDLTLVPYEVA--------------NEKMYDVLVDIINRHRTTLIFTNTRSGTEH 296 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + +L E L+ +HHGS+SKE R Sbjct: 297 VAYKLKEKGIENLE--------------------------------AHHGSLSKETRLRV 324 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ALK G+L+ V++++SLELGID+G +D+V+Q+ +P S+A GLQRIGR+GH G +KG Sbjct: 325 EKALKEGKLKAVISSTSLELGIDIGYIDVVVQIGSPKSIAKGLQRIGRSGHAYGATAKGR 384 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F +L++ +V+C + G+++ + P N LDVL+Q V + VDE Y+ +R Sbjct: 385 FLVFDNDELIECTTLVKCAYDGKIDRVRIPKNSLDVLSQIIVGMSIEKRWNVDEAYNIIR 444 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + + +LP+ F L L G Y GD K+ ++ E + + ++++ + G Sbjct: 445 SSYCYHELPKEKFIQVLRYL-GGYVLGD--TVYSKIWFDEEDMVFGRKRSSRMIYFMNMG 501 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPD Y V+ EG +R+G L E+ V + + D+ LGA S+ + I +V+V Sbjct: 502 TIPDEADYLVIDHEG------KRLGSLSEKFVEKLQKGDVFVLGARSYEVLSIRTGKVVV 555 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFL-------HLLADGAFFSGTIPPWLAEEN 660 A G+ +P W GE R +L +G F + + + + Sbjct: 556 KDATGKRPTVPSWVGEMLPRSFDLSVEVGKFREFVEKNIRERGEKKTIEILMKDYYLDYR 615 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 +I I++ IVP + +V+E D G II H P+GRRV++ + A A + Sbjct: 616 GARSIVSYIKQG--MHHIVPTHKRVVIEGYVDPAGKHNIIFHYPFGRRVNDALSRAYAFK 673 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 I +G + + +DD + + + L +++ +R A+ ++ LF RF Sbjct: 674 ITEKYGVNVGISITDDAFMLTL--KRRIRLEDIKNLLSSDEIEDALRRAIFNTELFKQRF 731 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 R CA+R+ ++ R G + +Q+LR+ ++L + PDFPV+ ET E V DLP Sbjct: 732 RHCASRSFMVLRRYKGRDISVARQQLRSDKILRLLSEIPDFPVMEETYNEIFNIVMDLPH 791 Query: 841 LERLMRRLNGGEIQISDVT-TTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 + ++R++ GEI++ V + TPS FA S++ + SD L E R+++L E Sbjct: 792 AKEVLRKIENGEIEVKIVPYSDTPSIFAHSIILSGI------SDIVLMEDRSALL---KE 842 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 L LL +V P E L + +E Q A + G D+LR L D+ +R Sbjct: 843 LHMKLLERVIPKEEL-----AAMFDEAQVSAYFQNKIKVRGKEDILRFLDLAPGTDVLRR 897 >UniRef50_Q8U202 Large helicase-related protein n=3 Tax=Thermococcaceae RepID=Q8U202_PYRFU Length = 866 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 276/897 (30%), Positives = 426/897 (47%), Gaps = 65/897 (7%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 + P +WF R F+ T Q + E+ L+ +PTGSGKTL+AFL + L G Sbjct: 19 ILDPIVGEWFRRKFRTFTPPQRYAVIEIHKGENVLISSPTGSGKTLSAFLSIISELISLG 78 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R+ +Y+SP++AL D++RNLQ PL+ I + R+ G +RV +RT Sbjct: 79 ----RQGKLEDKIYCVYVSPLRALNNDIRRNLQEPLQEIYELARKLGVEIPEIRVSVRTS 134 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT + E+SK+ + PP ILITTPESL + L + RE LR V+ VI+DEVHA+A +KRG+H Sbjct: 135 DTTSYEKSKMLKKPPHILITTPESLAIALNAPKFREKLRDVKWVIVDEVHALAENKRGSH 194 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 LAL+LERL L RIGLSAT+ +VA F V P+ ++V V Sbjct: 195 LALTLERLRELTGREFVRIGLSATIHPLEEVAKF--------VFGFDDNGEPRPGLIVDV 246 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 + + ED + + I + V ++T++FTN+R E++ L Sbjct: 247 SFAKKIKISVESVVEDLVYTPANVLSEALYRRIGELVKNRKTTLIFTNTRSGTERVVYHL 306 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 +++ + +HH S+S+E R E+ LK Sbjct: 307 KKMFPEWADK-----------------------------IEAHHSSLSREVRLNVEERLK 337 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 GEL+ +V+++SLELGID+G++DLVI + +P SV LQRIGRAGH++ VS+G+ Sbjct: 338 RGELKIIVSSTSLELGIDIGSIDLVILIGSPKSVNRALQRIGRAGHRLHEVSEGVILALD 397 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 R DLV+ V+ RL+ + P NPLDVL Q + A +V+E Y VRRA P+ Sbjct: 398 RDDLVEVTVLAHNARNRRLDRIKIPKNPLDVLVQHVLGMALERVWEVEEAYRVVRRAYPF 457 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGGTIPD 551 +DLP F L L+G Y + K+ E G R + + + GTIPD Sbjct: 458 RDLPFEDFMNVLRYLAGEYAGLEEKKVYAKIWL--EDGKFGRRGKMTRAIYYMNVGTIPD 515 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 V + + +G ++EE DI L ++ + +++ V P Sbjct: 516 EAKIDVFTMD------MKYIGTVEEEFAEHLMPGDIFVLAGRTYEFVKSKGNRIYVIPRE 569 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFL----HLLADGAFFSGTIPPWLAEENTIANIQG 667 G +P W E +L I F LL + + + + +E T I Sbjct: 570 GAKPTIPSWFSEMLPLSFDLAIDIQRFRKEVKRLLNNKRAKTFLMRKYGIDETTANAILS 629 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 EQ + I+P +++E R E + H+ GRR ++ + A A I Sbjct: 630 YFREQAKYS-IIPDDETVLVEVVR-EGNVVKYFFHTLIGRRANDALSRAFAYLISKRKKC 687 Query: 728 DASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 + V +D+G + ++P + + LF E L +++++A+ ++ L RFR A R Sbjct: 688 NVGVAITDNGFMLKVPREKELSQEEILELFRVENLREVLKKALDNTELLKRRFRHVANRG 747 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQG-YPDFPVILETLRECLQDVYDLPALERLMR 846 LL+ R G L +Q++ A LL + YPDFP++ E RE ++D D+ E + Sbjct: 748 LLVLRRYMGREKSLSRQQMNAQTLLNFLKKNYPDFPLLKEVYREIMEDKMDIGNAELFLG 807 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE-RRASVLSLDSELLR 902 + G I++ PSPFA +L E SD L E RR + L +++ Sbjct: 808 WIKEGRIEVIIREHKYPSPFAFNL------EVAGASDVVLMEDRRELIKELHKKIMA 858 >UniRef50_C5AJ01 DEAD/H associated domain protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AJ01_BURGB Length = 1632 Score = 800 bits (2065), Expect = 0.0, Method: Composition-based stats. Identities = 369/1403 (26%), Positives = 539/1403 (38%), Gaps = 248/1403 (17%) Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 +V V + + +W + I + HR+T+VF N+R +AE+L Sbjct: 326 IVDVGHARERDLALELPPVPLEPVMANDVWERVYDRIAELAAGHRTTLVFVNTRRMAERL 385 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L E L +HHGS++KE R E Sbjct: 386 ARHLGERLGHDL-------------------------------IAAHHGSLAKESRFDAE 414 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 Q LK G L+ +VAT+SLELGID+G V+LV Q+ +P +A LQR+GR+GHQVGG KG Sbjct: 415 QRLKHGRLKLLVATASLELGIDIGEVELVCQIGSPRGIAPFLQRVGRSGHQVGGTPKGRL 474 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA E + R Sbjct: 475 FPLSRDELVECAALLDCVARGELDRLRVPRAPLDVLAQQIVAEVTCAEWDETELWRRFTH 534 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 AAP+ DL R FD L ML+ + S R L +R TG + AR GA+L AVTSGGT Sbjct: 535 AAPYADLSRERFDEVLAMLAEGF-SSRRGPRRAYLHRDRSTGTVRARRGARLTAVTSGGT 593 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPD Y+VLL + +G ++E+ ES D+ LG S+RI ++ +V V Sbjct: 594 IPDNADYTVLLEPQGTQ-----IGTVNEDFAVESLAGDVFQLGNQSYRILRVETGRVRVE 648 Query: 609 PAPGRSARLPFWRGEGNGRPAEL----GEMIGDFLHLLADGAF----------------- 647 A G++ LPFW GE GR EL + LL G Sbjct: 649 DARGQAPNLPFWLGEAPGRSDELSAGVARLRAQIDALLEQGELDAARPAASRAIDTARAG 708 Query: 648 ----------------------------------FSGTIPPWLAEENTIANIQGLIEEQR 673 + + I + R Sbjct: 709 RRAAHASPPAHPAAAGAGAADPAPELAPSRLAPALAWLTGSLGLPDEAARQIVEYLARAR 768 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 A G +P LV+ER DE G ++++HSPYG R++ W +A+ R + + A Sbjct: 769 AALGALPTRDTLVMERFFDESGGTQLVIHSPYGTRINRAWGLALRKRFCRAFNFELQAAA 828 Query: 734 SDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 +DD I+ + + ++ +A+ + LF R+R A +L +P Sbjct: 829 TDDAIILSLSLAHSFVLSDVWRYLRTATAEHVLVQALLDAPLFGVRWRWNATTSLALPRY 888 Query: 794 TPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLP 839 T G RT QR+++ LL + P P++ +TL +CL + D Sbjct: 889 TGGRRTAPQLQRMKSEDLLATVFPDQVACAENLVGEREVPRHPLVDQTLDDCLHEALDTE 948 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 L+ R+ GEI++ PSP A +L F+ DAPL ERR + Sbjct: 949 GWLALLARIEAGEIELIARDLPAPSPLAAEILNAKPYAFL--DDAPLEERRTQAVLARRW 1006 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 D LD I V E+ + + + D L L ++ E+ Sbjct: 1007 TDPE---SADDLGALDADAIDAVREQAW-----PAVRDADEVHDALTSLACVSDEEARAH 1058 Query: 960 HTGSSEEVASYLENLLAVKRIF--PAMISGQERLACMD---DAARLRDALGVRLPESLPE 1014 H + +A R+ A+ G ER+AC+ ARL AL P Sbjct: 1059 HGWLAALTKLAAARRVAALRLADGRALWLGAERVACLRALHPEARLEPALAAPERGGTP- 1117 Query: 1015 IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ--- 1071 L D+ L + A +A L A VE L L +G VM + Sbjct: 1118 ---WTADTALLDVIRARLTGFGPLPAAAIAAPLGLPQAAVEAALVALESEGYVMRGRFTP 1174 Query: 1072 ---QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 + W + R+ +++ R PV + R L Q + T G Sbjct: 1175 GALAEEWCERHLLARIHRYTVKRLRREIEPVERADFMRFLFHWQHLSADTRGM------- 1227 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 G + + VIEQL G A WE +LPARV DY++ +DEL +G V+W+ Sbjct: 1228 ------GREALAAVIEQLEGFEAAAGAWEDDLLPARVADYATGGIDELCRSGRVVWTRIA 1281 Query: 1189 KLGEDDG-------------------------------LVALHLQEYAAESFTPAEADQA 1217 G +V L + A E Q Sbjct: 1282 PPARSPGERAPAADAGAGGGRGPRGAAKTAAGPLKTTPIVLLPRRNVGAWQALHDERAQP 1341 Query: 1218 NRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWA 1277 SA Q + LA GA F ++ R + L++AL LV G + +D +A Sbjct: 1342 ALSARAQRVHDALAAHGAMFFDELVDDAR------LLPVELEQALGELVAAGRVNADSFA 1395 Query: 1278 PLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPL---- 1333 LRAL R + + S S R RRG + + AGRW+L++ Sbjct: 1396 GLRALLRPA--VKRSAYYSPRTRRGGALI----------GGMDDAGRWALVRRPVPVTAA 1443 Query: 1334 ------------------------------------NDTERMLALAENMLDRYGIISRQA 1357 E + +A +L RYG++ + Sbjct: 1444 AGAEADAAAAHRDGIDGAGGEPLARAGTSRTSAAGPAPREALEHIAWTLLRRYGVVFWRL 1503 Query: 1358 VIAEN-IPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQT 1416 + E + + + + +E G I GRFV GL G QFA I LR+L Q Sbjct: 1504 LEREAAWLPPWRDLLRVYQRLEARGEIRGGRFVAGLAGEQFALPEAIPVLRELRRQPADG 1563 Query: 1417 RHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLV 1476 + +S DP N+ G LLP A AG V+ G + L G Sbjct: 1564 QW---TVVSGADPLNLAGTLLPGRKVAAL------AGNRVLYRDGVAVAALVGG-----E 1609 Query: 1477 WQEKEELLAPEVFHALTTALRRE 1499 + ++ L A E A RR Sbjct: 1610 FVYEDALCAAEHETARVKLARRR 1632 Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 103/220 (46%), Positives = 132/220 (60%), Gaps = 3/220 (1%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA WF F PT Q + W + LV APTGSGKTL AFL A+D L R+ Sbjct: 16 FHPAVAGWFAHTFAAPTGAQARAWPLIKAGRSTLVAAPTGSGKTLTAFLCAIDDLVRDA- 74 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP+KAL D++ NL PL GIA E RRG +R +RTGD Sbjct: 75 -LAHDGMLPDATLVVYVSPLKALSNDIRVNLDAPLAGIARELARRGLPVPEIRTAVRTGD 133 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHL 193 T ER+ + P IL+TTPESLY++L+S R L V T I+DE+HA+AG+KRG+HL Sbjct: 134 TTPAERNAQRKRAPHILVTTPESLYVLLSSESGRRMLSTVRTAIVDEIHALAGNKRGSHL 193 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 +L+LERLDAL+ RIGLSAT R VA FL G + Sbjct: 194 SLTLERLDALVGRPLPRIGLSATQRPIGLVARFLVGGKDA 233 >UniRef50_C5U8C6 DEAD/H associated domain protein n=1 Tax=Methanocaldococcus infernus ME RepID=C5U8C6_9EURY Length = 837 Score = 778 bits (2009), Expect = 0.0, Method: Composition-based stats. Identities = 263/897 (29%), Positives = 432/897 (48%), Gaps = 79/897 (8%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++ R WF +K T Q ++ L+ +PTGSGKTL+AFL ++ L + Sbjct: 17 EILEEPVRVWFKSKYKSFTPPQRYAIKEIHEKKNVLICSPTGSGKTLSAFLAGINELIKL 76 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E E I+YISP++AL D++RNL+ PLK I + + G +RV +RT Sbjct: 77 SMEKKLE----DKVYIIYISPLRALNNDIERNLKEPLKEICETAKNLGIELDEIRVAVRT 132 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 DT + ++ K+ + PP ILITTPESL + L S + + L+ V+ VI+DE+HA+ +KRG Sbjct: 133 SDTTSHQKQKMLKKPPHILITTPESLAISLNSPKFSQLLKDVKYVIVDEIHALT-NKRGV 191 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIRIVV 250 HL+LSLERL+ + ++ RIGLSAT+ ++A FL G R +V+ + +I+++ Sbjct: 192 HLSLSLERLNRI--SNFVRIGLSATISPLEEIAKFLVGVGRDCYIVDVSYRKEIEIKVLS 249 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV +D I + + + + H++ ++FTN+RG AE++ Sbjct: 250 PV--------------DDFIYTPTEEITKKLYSLLKKLIEEHKTVLIFTNTRGAAERVAF 295 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L +L + +HH S+S+E R E+ Sbjct: 296 HLKQL--------------------------------GIKGVGTHHSSLSREVRLEVEEK 323 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK GEL+ V ++SLELGID+G++DLVI + +P SVA LQRIGR+GH++ SKG+ Sbjct: 324 LKRGELKVVCTSTSLELGIDIGSIDLVILLGSPKSVARALQRIGRSGHRLHEKSKGIIIA 383 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 R DL+++ V+ G+++ + P N LDVL+Q V A VDE Y+ V+RA Sbjct: 384 FDRDDLIENTVLAYDARTGKIDKVKIPRNCLDVLSQHIVGMALEKVWNVDEAYNLVKRAY 443 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+KDL + F L LSG S + K+ ++ E + A+++ + GTIP Sbjct: 444 PYKDLSKEDFLDVLKYLSG---SIEERRVYSKIWFDGE--KFGKKGRARVIYFMNVGTIP 498 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 D V ++ VGE++EE + DI LG +++ +++ V Sbjct: 499 DETAVEVY-------ENNKLVGEVEEEFAEKLMKGDIFVLGGKTYKFLGGRGNRIRVREV 551 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE 670 +P W E +L + F A I + +E I+G IE Sbjct: 552 YNEKPTIPAWFSEQLPLAYDLALDVERFRGE-AKNISIDELIEKYEIDEKAGKAIKGYIE 610 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 EQ + IVP +++E +E + I H GRR +E A A A + + A+ Sbjct: 611 EQ-DRYAIVPTEEEMLIESFEEEKRRY-YIFHFVAGRRANEAIARAFANYVSKVKRANVR 668 Query: 731 VVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 ++ +D + + + LF + LL ++E++ S + RFR A R L+ Sbjct: 669 IMVNDYSFALVLSKSRRLSKELLGQLFNID-LLSNLKESIERSEIIKRRFRHVATRGFLI 727 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNG 850 R + + +Q+ A LLE + + P+ ET+RE L+D D+ ++ Sbjct: 728 LRRYLNKKISVERQQFNAEALLEYCKKV-NHPLYRETIREILEDYLDIENALNYYEKVKE 786 Query: 851 GEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ 907 +I ++PSPFA +L+ ++ ++ D +R +L L ++L + G+ Sbjct: 787 RKI--IYKKLSSPSPFAFNLVVMASSDVIFMED-----KRKMILELHKKVLEAIKGK 836 >UniRef50_Q57742 Uncharacterized ATP-dependent helicase MJ0294 n=6 Tax=Archaea RepID=HELX_METJA Length = 841 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 253/892 (28%), Positives = 429/892 (48%), Gaps = 78/892 (8%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++ ++WF R +K T Q ++ L+ +PTGSGKTL+AFL ++ L + Sbjct: 18 EILEKPVKEWFKRKYKTFTPPQRYAIKEIHEGKNVLICSPTGSGKTLSAFLAGINELIKL 77 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E+ E ILY+SP++AL D++RNL+ PLK I D + G +RV +RT Sbjct: 78 SMENKLE----DRIYILYVSPLRALNNDIERNLKEPLKEIYDVAKEIGIELDEIRVAVRT 133 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 DT + ++ ++ + PP ILITTPESL + L S + + L G++ VI+DE+HA+ +KRG Sbjct: 134 SDTTSSQKQRMLKKPPHILITTPESLAIALNSPKFSQLLSGIKYVIVDEIHALT-NKRGV 192 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIRIVV 250 HL+LSLERL+ + + RIGLSAT+ ++VA FL G R +V+ + +I+++ Sbjct: 193 HLSLSLERLNRI--ANFIRIGLSATIHPLTEVAKFLVGNGRDCYIVDVSYKKEIEIKVIS 250 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV + S I + + + H++T++FTN+R E++ Sbjct: 251 PVDDFIYTPS--------------EEISKRLYNLLKKLIEEHKTTLIFTNTRSATERVAF 296 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L +L +++ +HH S+S+E R E+ Sbjct: 297 YLKQLGVEKVE--------------------------------THHSSLSREHRLEVEEK 324 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK GE+R ++++SLELG+D+G++DLVI + +P SV+ LQRIGR+GH++ SKG+ P Sbjct: 325 LKKGEIRVCISSTSLELGVDIGSIDLVILLGSPKSVSRALQRIGRSGHRLHEKSKGIIIP 384 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 R DLV++ V+ G+++ + P N LDVLAQ V A VDE Y+ +++A Sbjct: 385 FDRDDLVENVVLAYDAKIGKIDRIHIPKNCLDVLAQHLVGMALEKVWDVDEAYNLIKKAY 444 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+KDL ++ F L+ L+G + A +W ++ + + + GTIP Sbjct: 445 PYKDLSKKDFLDVLNYLAGGIEEKNVYA----KIWLKDNKFGKRGKSVRAIYYMNVGTIP 500 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 D V+ A + VGE++EE + DI LG +++ +++ V Sbjct: 501 DETAVDVI-------ADGKYVGEVEEEFAEKLMKGDIFVLGGKTYKYLGGRGNKIRVKEV 553 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE 670 +P W E +L I F + + + +E T I+ ++ Sbjct: 554 FDEKPTIPAWFSEQLPLAYDLALDIEKFRKEVLS-SDIEEIREKYDIDEKTAKAIKNYMD 612 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 EQ IVP +++E DE I H GRR +E A A A I + + Sbjct: 613 EQNKFA-IVPDDEKVLIENF-DEEKRRYYIFHFVAGRRANEALARAFANYISKIKKCNVR 670 Query: 731 VVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 + +D G +P LF + +++ V+E++ S + RFR A R ++ Sbjct: 671 ISVNDYGFALILPKNRKIKRADITELFNLD-VVKNVKESIERSEILKRRFRHVATRGFMI 729 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNG 850 R + + +Q+ A LL+ + + P+ ETLRE L+D D+ ++ Sbjct: 730 LRRYMNRKISVDRQQFNAEMLLKYCKEV-NHPLYRETLREILEDSLDIDNALDYFEKIKR 788 Query: 851 GEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 +I + +PSPFA +L+ ++ ++ D ++ + L +++ Sbjct: 789 RKI--YYLELPSPSPFAFNLVVSASSDVIFMED-----KKKMIAELHKKVME 833 >UniRef50_C7DIU9 DEAD/H associated domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIU9_9EURY Length = 898 Score = 773 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 282/948 (29%), Positives = 451/948 (47%), Gaps = 104/948 (10%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 P S V + TR WFL FK+ T Q ++ + A ++ L+ APTGSGKT++A Sbjct: 5 TSTPFEDSKSLGVLNTYTRKWFLENFKELTPPQKFSFKLIAEKKNVLITAPTGSGKTMSA 64 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 F+ + LF + + T +YISP+KAL D+ RNL PL I + ++ Sbjct: 65 FVSVISALF----DKALKGELEDTVYCIYISPLKALNNDIYRNLVKPLTEIYETIKKEKG 120 Query: 122 TEV------NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVE 174 ++ + +G+RTGDT ER K PP+IL+TTPESL +++ S R E L+ VE Sbjct: 121 VDLIKENIREVTIGVRTGDTLQSERRKQLIKPPNILVTTPESLAILINSERYVENLKHVE 180 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GG 229 +IIDE+H +A +KRG HL+LS+ERL L+ + RIGL AT+ + A FL G Sbjct: 181 YIIIDELHELANNKRGVHLSLSVERLQELIGHNLIRIGLGATLYPLEEAAKFLVGYDNGA 240 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 R TVV+ + +I+++ PV +M +V E +I + I + Sbjct: 241 PRDCTVVDASWSKSIEIKVMSPVVDMINVQ--------------ENAIEDSMYKMINGAI 286 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV 349 +ST++FTN+R E++ L + + Sbjct: 287 GASKSTLIFTNTRSGTERVVFNLKKRFGYSDT---------------------------- 318 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASG 409 +HHGS+S+E R E+ LK G L+C V+++SLELGID+G +DLVIQ+ +P SV Sbjct: 319 --IAAHHGSLSRESRLEVEELLKKGALKCAVSSTSLELGIDIGTIDLVIQLGSPKSVTRS 376 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 +QRIGRAGH +KG R DLV+ ++ + L++ + P N LDVL+Q V Sbjct: 377 VQRIGRAGHSYKSTAKGDVIVLNRDDLVECTIMADAALKKHLDSFSTPQNALDVLSQHIV 436 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 + DE Y+ V+RA P+ +L F + + LSG Y + K+ ++ + Sbjct: 437 GMSITRKWNADEAYALVKRAYPYHNLEEGDFYSIIKYLSGSYVDLESRRVYGKIWYDEKE 496 Query: 530 GILTAR-PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDII 588 + R A+L+ + + GTIPD +V L ++ +G ++EE + + DI Sbjct: 497 NMFGRRGKYAKLIYMLNLGTIPDEVAINVFLA-----GTNKWIGNIEEEFLARMKPGDIF 551 Query: 589 TLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD---- 644 TLG ++ + V A S +P W E ELG IG F ++ Sbjct: 552 TLGGRLYKFSHAKGTKCYVEEAKSASPTIPPWFSEQLPLSYELGIAIGKFRKEMSGMIRE 611 Query: 645 ----------------------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGS 682 + ++N + I EQ G+VP + Sbjct: 612 EIDRRHKKGALSGSGMLRKGSIPKRIDSYLSKLPIDKNAKSAIYAYFAEQELFCGLVPNN 671 Query: 683 RHLVLERCRDEIGD-WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVAR 741 +++E D + D ++ HS +GRRV++ + A A + + D S++ +D+G V Sbjct: 672 ELILVEYTSDNLKDSSYLVFHSLFGRRVNDALSRAFAVKFGKMTDEDISIMVNDNGFVLF 731 Query: 742 IPDTDGKLPDAAIFLFE---PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR 798 + LFE L ++++E + + L RFR AAR+ ++ G + Sbjct: 732 VDHAMSMSERKVKKLFEEVLSSDLSKLLKENIRKTELMKRRFRHVAARSFMILKNYKGWK 791 Query: 799 TPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 P+ +Q++ A LL A+ PDFP+I ET RE D+ D+ ++ RL G+I+ Sbjct: 792 QPIGRQQVNAQLLLNAAEEIDPDFPIIRETYREIFGDLMDINRANEVLSRLKDGKIKYQF 851 Query: 858 VTTTTPSPFATSLL-FGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 ++T +PSPFA S+L FG+ M + ER+ + L +L+ + Sbjct: 852 ISTDSPSPFAHSMLTFGHADVVM------MKERQQYLKYLHKMVLKKI 893 >UniRef50_O27830 Uncharacterized ATP-dependent helicase MTH_1802 n=24 Tax=Archaea RepID=HELX_METTH Length = 862 Score = 763 bits (1970), Expect = 0.0, Method: Composition-based stats. Identities = 284/902 (31%), Positives = 436/902 (48%), Gaps = 76/902 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 + P +WF R F T Q R + LV +PTGSGKTL AFL + L R Sbjct: 17 ILHPWVSEWFRRTFDDFTEAQRYAIMDIHRGRNVLVSSPTGSGKTLTAFLSIISELTRLA 76 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + E + +YISP+KAL D++RNL+ PL I D G ++ +R +RTG Sbjct: 77 DDGELE----DSVYCIYISPLKALDNDIERNLEEPLSAIRDIAAGEGR-DLEIRKAVRTG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT + ERS++ + PP ILITTPE+L ++L + RE L V VI+DE+H++A +KRG H Sbjct: 132 DTTSYERSRMLKKPPHILITTPETLSILLVAPKFREKLSTVRYVIVDEIHSLADNKRGVH 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIR 247 L+LSLERL L+ RIGLSATV VA FL G +R +V+ ++ I Sbjct: 192 LSLSLERLQHLVG-DFTRIGLSATVHPLERVARFLVGYSYGSERECLIVDVSYLKELDID 250 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 ++ PV +D A I + + D + HR+T++FTN+R E Sbjct: 251 LICPV--------------DDIVAADPEEIGNALYDILHDLIEDHRTTLIFTNTRSGTES 296 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L + S +HH S+S+E R T Sbjct: 297 VVYNLKSRFPESYSDSN---------------------------IMAHHSSLSREIRLET 329 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK GEL+ VV+++SLELGID+G +DLV+ +++P SV+ LQRIGR+GHQ+ SKG Sbjct: 330 EEKLKRGELKAVVSSTSLELGIDIGYIDLVVLLSSPKSVSRALQRIGRSGHQLHQRSKGR 389 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 R DLV+ ++I++ G+++++ P N LDVLAQ A + +D + +R Sbjct: 390 IVVVDRDDLVECSLILKNALEGKIDSIKVPENCLDVLAQHIYGMAIENPWDIDHALAVIR 449 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSG 546 + +++L R + + L L+G Y + K+ + + R A++L T+ Sbjct: 450 NSYCYRNLSREDYLSVLSYLAGEYVELEERYVYAKIWVDYDKNQFGKRGKLARMLYSTNI 509 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 GTIPDR V K G + VG ++E+ + + R D LG +R V Sbjct: 510 GTIPDRSAAVV-------KCGGKVVGRIEEDFMEKLRKGDTFVLGGRIYRFNYARGMTVN 562 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA--------- 657 VTPA G +P W E +L I F ++ DG F G + Sbjct: 563 VTPASG-PPTIPSWFSEQLPLSFDLALDIQRFRDIM-DGKFQYGRSRDEIMEFIMSYLHV 620 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 +E ++I EQ G +P R +++E G I+ HS +GRRV++ + A+ Sbjct: 621 DERAASSIYEYFREQYLYAG-IPSIRRMLVEYYTGFGGRKFIVFHSLFGRRVNDAISRAV 679 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 A I + D + SD+G G L A EPE L ++++A+ + A Sbjct: 680 AYVIARRYRRDVMISVSDNGFYLSSEGKMGGL--EAFRELEPENLRNVLKKALDRTETLA 737 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPD-FPVILETLRECLQDVY 836 +RFR CA RAL++ R G + +Q++R LL+ D FP++ E RE ++D Sbjct: 738 SRFRHCAGRALMILRRYRGEEKSVGRQQVRGKILLKFVSELDDKFPILEEARREVMEDYM 797 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSL 896 D+ R++ + G+++I + T PSPFA +L+ + + D RR + Sbjct: 798 DIENAIRVLEWIRDGDMEIKQINTRIPSPFAFNLVAQGYLDVLKYEDRIEFIRRMHQAII 857 Query: 897 DS 898 D Sbjct: 858 DE 859 >UniRef50_Q6L0N7 ATP-dependent helicase n=1 Tax=Picrophilus torridus RepID=Q6L0N7_PICTO Length = 1667 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 277/917 (30%), Positives = 448/917 (48%), Gaps = 84/917 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P +WF + + Q + + LV +PTG+GKTL FL ++ LF Sbjct: 14 LDPVVAEWFNSKYDSLSEPQRYGIPLIHNKNNVLVSSPTGTGKTLTGFLSIINELF---- 69 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R +YISP+KAL DV +NL+ PL I + R G ++R+ +R+GD Sbjct: 70 IKARSGSLEDKIYCVYISPLKALANDVNKNLKTPLNEIYEIARSHGIDLPDIRIAVRSGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A+ER+++ PP ILITTPESL L+LT ++ RE GVE VI+DE+H ++ +KRG+ L Sbjct: 130 TDARERARMLSKPPHILITTPESLSLVLTANKFREKFFGVEYVIVDEIHEISSTKRGSLL 189 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRI 248 +L+LERL + + RIGLSAT +AA+L G R ++ ++ +R+ Sbjct: 190 SLNLERLAYIAG-NFVRIGLSATQAPLDLIAAYLCGYDGEKRRECRIIEVNTNKYLDLRV 248 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + P ++ VS + + I+D V H++T++FTN+RG E + Sbjct: 249 ITPSKDLTKVSYEIAT--------------EKMYDIIVDLVNSHKTTLIFTNTRGSTEHV 294 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 RL ++ + +HH S+ KE R E Sbjct: 295 AMRL--------------------------------KARGIENIEAHHSSLGKETRVDVE 322 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 LK GEL+CV+ ++SLELGID+G +DLVIQ+ +P SV+ LQRIGR+GH V SKG Sbjct: 323 NKLKRGELKCVITSTSLELGIDIGYIDLVIQIGSPKSVSRALQRIGRSGHGVRDFSKGRL 382 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 DL++ V+ + ++ + P NPLDVL+Q V A VDE Y ++ Sbjct: 383 VVFDIDDLMECTVLTRAAYDHNIDKVQVPLNPLDVLSQALVGMALEKTWNVDEAYKIIKN 442 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + + L R F TL LSG+ K+ ++ ET + +L+ + GT Sbjct: 443 SFSFHTLDYRDFIYTLKYLSGKIEGNT---IYSKIWYDEETSTFGKKRSTRLIYFMNVGT 499 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPD Y+V G R +G+L ++ V + R DI LGA +++ + R++V+V+ Sbjct: 500 IPDEANYNVFNDHG------RMIGQLSDKFVEKLRQGDIFVLGARTYKFIKTVRNRVMVS 553 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---DGAFFSGTIPPWLAEENTIANI 665 A G + +P W GE R +LG +IG F LA D + + + +E ++ Sbjct: 554 DATGMTPTVPSWTGELLPRSYDLGVLIGRFRKELASMDDNSAKEWLMKNYYIDEFGAMSL 613 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 I+ Q+ +P L++E D+ ++ II H P GRRV++ + A A I + Sbjct: 614 VSYIKAQK--PYGIPSEDFLLIEGYMDK--NYNIIFHIPLGRRVNDALSRAYAYIISNNY 669 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 +A + +D+G + I + I++ ++ ++ +F RFR CA Sbjct: 670 DVNARISVNDNGFMIS--FDKRIEIKDVIRMLTSRNFDDILKRSIENTEMFKQRFRYCAT 727 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RAL++ + P+ +Q+LR+ +LL + + +FPVI ET E L DV D+ + Sbjct: 728 RALMVLRKYKSADVPVTRQQLRSDKLLRVLENMDNFPVIKETYNEILNDVMDMEHALLYI 787 Query: 846 RR-LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL-SLDSELLRN 903 + + G +I+D + T SPF+ +L+ SD L E ++ +L ++LL Sbjct: 788 KNVIEKGRFKINDYSRET-SPFSYNLIISGA------SDVVLMEDKSKLLREFQNKLLDK 840 Query: 904 LLGQVDPGELLDPQVIR 920 + G + D +++ Sbjct: 841 IYGSSINFLVNDARLVE 857 >UniRef50_A5UKH9 ATP-dependent helicase, Lhr-like protein n=5 Tax=Methanobacteriaceae RepID=A5UKH9_METS3 Length = 866 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 258/915 (28%), Positives = 436/915 (47%), Gaps = 82/915 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P R WF F+ T Q ++ + + LV +PTGSGKTL AFL L L Sbjct: 18 LHPWVRQWFDETFEDFTPAQKKSIVDIHKGNNILVSSPTGSGKTLTAFLSILSEL----T 73 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 +++ +YISP+KAL D+++NL+ PLKGI + ++ +R +RTGD Sbjct: 74 TLSQKGELEDKVYCIYISPLKALDNDIEKNLEEPLKGI----EKIAGKDLGIRKAVRTGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 T +R K+ + PP ILITTPE+L ++L + RE L V+ VIIDE+H++A +KRG HL Sbjct: 130 TTQYQRQKMLKKPPHILITTPETLSILLVAPKFREKLSNVKYVIIDEIHSLAENKRGVHL 189 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVVNPPAMRHPQIRI 248 +LSLERL L+ RIGLSATV +VA FL G +R ++N ++ I++ Sbjct: 190 SLSLERLQHLIGQY-TRIGLSATVSPLEEVAKFLVGYEYGVERDCKIININYLKDLDIKV 248 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + PV++ + ED+ G + D + +++T+VFTN+R E+ Sbjct: 249 LCPVSD------IMLADSEDTRLGTYNLLD--------DLIQENKTTLVFTNTRSGTERF 294 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L +++ +HH S+SKE R TE Sbjct: 295 VYNLKKMFPKNYNDEN---------------------------IMAHHSSLSKEVRLATE 327 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 LK G+L+ VV+++SLELGID+G +DLV+ + +P SV+ LQRIGR+GH++ S G Sbjct: 328 NKLKEGKLKVVVSSTSLELGIDIGYIDLVVLINSPKSVSRALQRIGRSGHKLNEKSTGRI 387 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 R DLV+ +V+++ G+++ + P N LDVLAQ + + +D Y +R+ Sbjct: 388 IVTNRDDLVECSVLLKDAKEGKIDKINIPQNCLDVLAQHIYGMSIENPWDIDYAYDVIRK 447 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGG 547 + +K+L R ++ L ++G Y + K+ + + R A++L T+ G Sbjct: 448 SYCYKNLTRDDYEDVLSYMAGEYEELEERYVYAKIWIDYKENTFGKRGKLARMLYSTNIG 507 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPD V K VG+++E+ + + D LG ++R + V Sbjct: 508 TIPDSSGVLV-------KCDGETVGKIEEDFMERLKKGDTFVLGGQTYRFNYGKGMTINV 560 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP--------WLAEE 659 +PA G +P W + +L I F + + + ++ Sbjct: 561 SPANG-PPTIPSWFSQQLPLSFDLAMDIQRFRAHMDAKFRYGKSKQEIMEFIYDYLYVDD 619 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 +I EQ +P ++ L++E + +I HS +GR+V++ + A+A Sbjct: 620 FAANSIYEYFVEQYTYA-KIPSNQRLLIEYYKGFGDRRFVIFHSLFGRKVNDALSRAVAY 678 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + + + ++ SD+G T G L A PE I+ +++ + A+R Sbjct: 679 IVARQYNTNVTISISDNGFYLSAEGTLGGL--EAFKQLTPENFKNILTQSLNKTETLASR 736 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-DFPVILETLRECLQDVYDL 838 FR CA R+L+ G + +Q++R LL+ Q DF ++ E RE L+D D+ Sbjct: 737 FRHCAGRSLMTLRHYKGEAKSVGRQQVRGKILLKFVQEMDNDFSILKEARREALEDYMDV 796 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 +++ + G+++I + T P+PFA +L+ + + Q+D +R + Sbjct: 797 NNALKVIELIANGQMEIKTINTIIPTPFAFNLVSQGYLDVLNQNDKAEFTKR-----MHK 851 Query: 899 ELLRNLLGQVDPGEL 913 +L + ++ +L Sbjct: 852 AVLEQIKEKLKESDL 866 >UniRef50_UPI0000F5176A ATP-dependent helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F5176A Length = 1698 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 274/993 (27%), Positives = 464/993 (46%), Gaps = 109/993 (10%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 WF + + + Q + + + ++ LV +PTG+GKTL FL ++ LF++ Sbjct: 19 IVAQWFNTKYSELSEPQKKAIPLIHQKKNVLVSSPTGTGKTLTGFLSIINELFKKA---- 74 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 R +YISP+KAL D+ +NL PL I + +G ++V +R+GDT Sbjct: 75 RNNELEDKIYCVYISPLKALANDINKNLNEPLSEIYALAKEKGLDIPEIKVAVRSGDTAQ 134 Query: 138 QERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALS 196 ER+K+ R PP I+ITTPES L +T ++ +E VE VI+DE+H V+ +KRG+ L+ + Sbjct: 135 SERNKMLRKPPHIIITTPESFSLAITATKFKEKFSSVEYVILDEIHEVSSTKRGSLLSFN 194 Query: 197 LERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRIVVP 251 LERL+ L RIGLSAT + ++L G R ++ ++ + I+ P Sbjct: 195 LERLENL-SPGFVRIGLSATQAPLDLIGSYLCGYNGEHKRDFEIIEVNTNKYLDLSIITP 253 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 V ++ VS + + ++D V H++T++FTN+R E + R Sbjct: 254 VKDLTMVSYEVA--------------NEKMYDILVDLVNSHKTTLIFTNTRSSTEHVAMR 299 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L ++ + +HH S+ K+ R E L Sbjct: 300 L--------------------------------KARGIENIEAHHSSLGKQTRIEVENRL 327 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+GEL+CV+ ++SLELGID+G +D+VIQ+ +P SV+ LQRIGR+GH V +S G F Sbjct: 328 KNGELKCVITSTSLELGIDIGYIDMVIQIGSPKSVSRALQRIGRSGHGVKDLSLGRFIVF 387 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 DL++ AV+ + + ++ +T P NPLDVL+Q ++ + VD Y+ +R + Sbjct: 388 DLDDLMECAVMTKAAYDHEIDKVTVPENPLDVLSQGIISMSLEKNWDVDVAYNVIRNSFS 447 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 + L + +TL LSG+ K+ ++ + + + +++ + GTIP+ Sbjct: 448 FHTLEYGDYISTLQYLSGKIEGNT---LFSKIWYDEDEKVFGKKASTRMIYFMNVGTIPE 504 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ +G R +G+L ++ V + DI LGA ++ + T++ + V A Sbjct: 505 EANYNVVNEKG------RMIGQLSDKFVERLKNGDIFVLGAKTYMFLKATKNNITVKVAT 558 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN-----TIANIQ 666 G +P W GE R +LG +IG+F L + WL E ++ Sbjct: 559 GMKPTVPSWTGELLPRSYDLGILIGEFRKTLYERIKNGEETEKWLMENYRVDSFGARSLI 618 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 ++ Q N T +P L +E D + II H P GRRV++ + A + +G Sbjct: 619 SYVKTQGNFT--IPTEDLLYIEGYIDND-LYSIIFHIPLGRRVNDALSRAYGLAVSNKYG 675 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 A+ + +D+G + + L P +V ++ ++ LF RFR CA R Sbjct: 676 ANTRISVNDNGFTLTL--NRKVPIKDVVGLLTPSNFRDLVDRSIINTELFKQRFRYCATR 733 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 +L++ + + +Q+LR+ +LL I + +FPVI E E DV D+ + Sbjct: 734 SLMVLRKYKQTDISVARQQLRSDRLLRILESMDNFPVIKEAFNEVKYDVMDVERAAWFVN 793 Query: 847 R-LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL-SLDSELLRNL 904 ++ +I D +T T SPF+ +L+ V SD L E R+ +L L S+LL + Sbjct: 794 DVISKKHYKIKDYSTET-SPFSYNLILSGV------SDIVLMEDRSKLLKELRSKLLDKI 846 Query: 905 LGQVDPGELL------------------DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 G L+ D + R+ E + P R+ FD Sbjct: 847 YGTEGIEFLIKDSKLVENYFKNKIPAIQDIESYREFLEHFLYVDPFRKK------FDSPL 900 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKR 979 E + ++++ ++ S E V ++ + V R Sbjct: 901 EYATIDLDEMTEQLINSGELVYCFIRSDQWVSR 933 >UniRef50_Q0W5W5 Lhr-like RNA helicase n=12 Tax=Euryarchaeota RepID=Q0W5W5_UNCMA Length = 885 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 257/914 (28%), Positives = 432/914 (47%), Gaps = 84/914 (9%) Query: 14 VFSPATRDWFLRAFK--------QPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA 65 +F P+ R W+ F T Q + + ++ L+ +PTGSGKTL++F Sbjct: 31 LFEPSVRQWWTETFGPKKQVNNGYFTPPQRLAIPLIHQGKNVLICSPTGSGKTLSSFTAI 90 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 ++ LF + E + +YISP+K+L D+ +NL+ PL D+ + E Sbjct: 91 INELFLLASSEGLEN----SVYCIYISPLKSLANDIHKNLEQPL----DQISKLYGDEKL 142 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAV 184 +R IR GDT + ERS + R P IL TTPE+L ++L S R E L V VIIDE+H++ Sbjct: 143 IRAAIRHGDTASDERSSMLRKTPHILNTTPETLAILLNSPRFVEKLATVRWVIIDEIHSM 202 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPP 239 A +KRG L+L+LERL+ ++ RIG SATV + FL G R VTVV+ Sbjct: 203 ADTKRGVFLSLALERLEEVVRKPFVRIGCSATVEPLDKIGEFLAGCENGIPRDVTVVDTR 262 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +R ++++ PV N+ + S+ + + I + + +T+VFT Sbjct: 263 FVREFDLKLLCPVPNLIEASA--------------QEVNHALYEMIHGMIQENTNTLVFT 308 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE++ L + Y S HHGS+ Sbjct: 309 NTRSGAERILYHLRKEYPDYYNEENS---------------------------GCHHGSL 341 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 SK R E LK+G L+ +++SLELGIDM +DLVIQV +P SV++ LQR+GRAGH Sbjct: 342 SKGGRLDIEDKLKAGTLKVATSSTSLELGIDMPYLDLVIQVGSPKSVSALLQRVGRAGHS 401 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 +G V KG R +L++ AV+++ G ++ + P N LDVL Q A + +++ Sbjct: 402 LGQVVKGRVIALDRDELIECAVMLKKAQDGFIDGVNIPENCLDVLIQHVFGMAINEPMEL 461 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-A 538 + VRR+ +++L FD + L+G P + + K+ + ETG + R A Sbjct: 462 ERVKKIVRRSYCYRNLSDEDFDEVIKYLAGSLPGMEDRSIYGKIWHDPETGKIGRRGKLA 521 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ 598 +++ T+ GTIPD V+ ++ + VG+LDE+ + + + D+ LG + Q Sbjct: 522 RMIYYTNIGTIPDEFSCDVIT-----RSDQKWVGKLDEQYLEKLQKGDVFVLGGKFFEFQ 576 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL----HLLADGAFFSGTIPP 654 +V V P+ R +P W E +L I DF + D + + Sbjct: 577 YRRGSKVYVDPSHSR-PTVPSWFSERLPLSFDLALHILDFRDMMARRVGDRSTRKWLLNT 635 Query: 655 WLAEENTIANIQGLIEEQRNATG--IVPGSRHLVLERCRDEIG-DWRIILHSPYGRRVHE 711 + +EN+ +I + +EQ G + + V+E D+ S YGR ++ Sbjct: 636 YPLDENSAESIYQIFDEQIRYKGENSISTRKKFVIEEHLDKPHFRRYYYFQSNYGRPFND 695 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVG 771 + +A + ++ ++ SD G +P + I + K+ ++R ++ Sbjct: 696 GLSRVLAYIVSRQRTSNVTLSVSDSGFFISVPLSKKLDLLDYIESLDETKVKDLLRLSLE 755 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 S L FR A R+L++ GH+ +Q++ A +L A +F V+ E RE Sbjct: 756 ESQLLKRMFRINATRSLMILRNYKGHQKSAKRQQVSADMMLSYAHKLDNFAVLEEAYREI 815 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 ++D ++ +++++R + GEI++ + TPSP + + + SD LAE + Sbjct: 816 IEDKLEIAHIQQIIRGIKDGEIEVELIPVETPSPLSFGI------ASLSASDVVLAEDKN 869 Query: 892 SVL-SLDSELLRNL 904 S+L ++ + Sbjct: 870 SLLKEFHQRVMEKI 883 >UniRef50_B3T6F6 Putative DEAD/DEAH box helicase n=1 Tax=uncultured marine microorganism HF4000_APKG2H5 RepID=B3T6F6_9ZZZZ Length = 1763 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 308/1170 (26%), Positives = 488/1170 (41%), Gaps = 155/1170 (13%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 ++ + L D+ SP R+WF+ F T Q EH L+ +PTGSGKTL AF Sbjct: 8 EDRMETQELLDILSPPVRNWFVDTFPDFTEPQKIAIPRILNGEHLLLCSPTGSGKTLTAF 67 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L +D L R + T T + +YISPIKAL D+Q+NL PL I + R Sbjct: 68 LTIIDDLVRRSLDGT----LPDTVQCVYISPIKALANDIQKNLIGPLSEIKE--RFLPSR 121 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 ++++ +RTGDTP ER K+ R PP ILITTPESL L+L S R R L+ ++ +IIDE+ Sbjct: 122 AKDIKIALRTGDTPQNEREKMLRRPPHILITTPESLGLILASKRWRPNLKDLKWMIIDEM 181 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP--------- 232 H++ +KRG HL+LSL +D ++ + QRIG+SAT+ DVA FL P Sbjct: 182 HSLVSNKRGTHLSLSLALMDTVVSSEVQRIGISATMEPLDDVAEFLVASDPRESDMEPQR 241 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 V++ N R + I++P A + I + I + V H Sbjct: 242 VSIANVSGSREIDLDIILPTARFSSIPI--------------KEILDHNIDRIKELVEAH 287 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 +T+VF N+R + E + RL + + + Sbjct: 288 TTTLVFVNTRNMTETVVQRL--------------------------------KIAGLEGV 315 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 HHGS+ K R E+ LK+G LR VV+++SLELGID+G+VDLVIQV +P S+++ LQR Sbjct: 316 EGHHGSMDKTIRLDVERRLKNGLLRAVVSSTSLELGIDIGSVDLVIQVGSPGSISTALQR 375 Query: 413 IGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 +GRA HQVGG+ + F P + DL++ + + G ++ L P N LDVLAQ + + Sbjct: 376 LGRASHQVGGIPRARFLPTSPHDLLELVAVQTGILRGSMDLLKFPKNCLDVLAQFMIGLS 435 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL 532 + +DE Y V + P++ LP + LD+L ++ + E Sbjct: 436 IIREWDIDEGYELVTSSWPYRSLPYEDYIEVLDLLEEER----------RIWVDWEDNRF 485 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 R AQ++ T+ GTI Y V +G VG+L V R D+ LG Sbjct: 486 GKRGFAQMIYYTNIGTIAPDNNYLVFTSDGT------LVGQLSSSFVQSLRNGDVFLLGG 539 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 +++R+ + +V VT A G +P W GE R EL + I L +A + Sbjct: 540 STYRVSSVRGTRVNVTSATGYRPTIPSWTGEAMSRTHELSQEILQLLGHVALRLRLGDDV 599 Query: 653 PPWLAEENTIAN-----IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGR 707 P L + ++ + EE T VP +++E+ + + I+ + GR Sbjct: 600 KPLLTDVLGLSRPVASALSEFFEEHCATTFQVPSRDRILVEQVEAPLPTY--IVTTCRGR 657 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVR 767 + A + ++DD IV + + E ++ +I R Sbjct: 658 AFNMALGYLFA-----------GIASADDVIVHELSFDENGFMVKLSHEVEVSRIPEIFR 706 Query: 768 EA---------VGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 + S LF RFRE ++R++L P R G Q + +A Q+++ + Sbjct: 707 NGRSGDTLQRFLMDSQLFTKRFREVSSRSMLNPRRIGGDEVSPKQFQQKAEQIMQKHRKM 766 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 D ++ E + E L D+ L+ + R++ +++I PSP +L + Sbjct: 767 DDSIIVREVMNEILHTDLDMEQLDDFISRMDSEDVRIVHRKVKMPSPLGMTLFMSSFEDL 826 Query: 879 MYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE 938 + L R + +D E+LR LLG LD + + + Sbjct: 827 L-----SLRTRAFLIKDVDPEILRRLLGARSLATDLDEGKLDDYYQSKVSV-----PLNA 876 Query: 939 EGLFDLLRELGPMTVEDLAQRHTG-----SSEEVASYLENLLAVKRIFPAMISG----QE 989 L L+ G + ++ + + ++ L + +G E Sbjct: 877 NALLKLMDMGGGLEPTLTNPLYSDKLRNIDFDVMQGWVHELAERGLVTKIRNTGHKQIDE 936 Query: 990 RLA--------------CMDDAARLRD-----------ALGVRLPESLPEIYLHR-VSYP 1023 + + AA + D +G+ P + +S P Sbjct: 937 KWFSMRMAGVHGTLGCLAVAGAAEMDDLRELYTGGLTFEMGMDFKGGTPGRWKKTGLSDP 996 Query: 1024 LRDL---FLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 L L L L + T+ L A V+ LQ+L + LV E Sbjct: 997 LDCLRLKLLDMLGSEGPQTSVALCERLPFPPAQVDSVLQELEMRNLVSIGFFKQTDDGEY 1056 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLE 1110 R+ + V T LLL+ Sbjct: 1057 ILRMDEYRITG--GEVDVVDYRTLQSLLLQ 1084 >UniRef50_D2EED6 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EED6_9EURY Length = 878 Score = 699 bits (1803), Expect = 0.0, Method: Composition-based stats. Identities = 255/920 (27%), Positives = 439/920 (47%), Gaps = 83/920 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P + WF+ FK T Q ++ + ++ L+ APTGSGKTL+AF+ +++L Sbjct: 16 ETLGPIVKKWFISKFKGLTPPQKFSFKLIHDHKNVLITAPTGSGKTLSAFIPIINKLVEL 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 D + + LYISP++AL D+ +NL +P++ + + + +G+RT Sbjct: 76 SVND----QLKDEIKCLYISPLRALNNDIYKNLILPIEDLYKTPEL--IEKRKITIGVRT 129 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP ER K +PP+I +TTPESL +ML S + + ++ VIIDE+H +A SKRG+ Sbjct: 130 GDTPQNERRKQFVHPPNIFVTTPESLAIMLNSPKFIQKFVNLDYVIIDELHELANSKRGS 189 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIRIVV 250 HLA+SLERL L++ RIGLSAT+ A+FL G R VV+ + +++ Sbjct: 190 HLAISLERLTNLINHDFVRIGLSATIYPLEKAASFLVGTKRSCVVVDASWSKKINAKVIS 249 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV ++ +E I + I V +R+T++FTN+R E+L Sbjct: 250 PVKDL--------------IYTKESEIDDSMYNIINKIVKMNRTTLIFTNTRSGTERLVF 295 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L + + + + +HHGS+S+E+R E+ Sbjct: 296 NLKKRFGYKDEE-----------------------------VSAHHGSLSREERFSVEEN 326 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+G L+CVV+++SLELGID+G +D VIQ+ +P S+ LQRIGR+GH + G Sbjct: 327 LKNGRLKCVVSSTSLELGIDIGNIDNVIQINSPKSITRALQRIGRSGHGFKDTANGDLII 386 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 R DL++ V++ +L+ T P NPLDVLAQ V +D+ Y+ +++A Sbjct: 387 NNRDDLIECTVMLYDGLKRKLDAFTMPENPLDVLAQHIVGMGLNKIWNIDDAYNLIKKAY 446 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA-QLLAVTSGGTI 549 +++L ++ F + L+G Y + K+ +++++ R +L+ T+ GTI Sbjct: 447 SFRNLEKKEFMDLIKYLAGEYVPLRERSVYGKIWFDKDSNKFGKRGRLTRLIYYTNIGTI 506 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD +V + +++G ++EE + + + D+ LG ++ Q+ + V P Sbjct: 507 PDEVAINVYIW-----GTKKKIGNIEEEFLEKLKKGDVFVLGGKVYKFQRSSAADCFVLP 561 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--------------DGAFFSGTIPPW 655 A G +P W E EL IG F + I + Sbjct: 562 AIGEKPNIPPWFSEQLPLSYELAIDIGKFRREFSSIITRLPKEKFIYKKQKELPEKIKKY 621 Query: 656 LAEENTIAN----IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 L N I I EQ T +P + +++E+ R ++ I HS +GRRV++ Sbjct: 622 LLSMPADKNSIISIYEYILEQVYFTDKIPSDKLILIEKTRYNDREY-TIFHSLFGRRVND 680 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVA-RIPDTDGKLPDAAIFLFEPEKLLQIVREAV 770 + A + + +V +D+G D L + I + + +I++E + Sbjct: 681 ALSRVFAFILSDKLDEELELVINDNGFALISNEKIDDYLIKSVISVAYNSDIRKIIKENI 740 Query: 771 GSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-DFPVILETLR 829 + + RFR AAR L++ GHR + +Q++ A LL+I DFP++ E R Sbjct: 741 KRTEMLRRRFRHAAARGLMILKNYKGHRIRVERQQINAQALLKIISEMDEDFPILKEAYR 800 Query: 830 ECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAER 889 E +DV D+ +++ + +I+ S + T PSPF+ +L+ + + + + Sbjct: 801 EIEEDVMDILNASSILKSIKSKKIKYSIIETPVPSPFSHNLVTIGETDVI-----SIKNK 855 Query: 890 RASVLSLDSELLRNLLGQVD 909 + V L ++ + + + Sbjct: 856 KEYVRQLHRLVMEKIAEKQN 875 >UniRef50_D2RXL5 DEAD/H associated domain protein n=5 Tax=Halobacteriaceae RepID=D2RXL5_9EURY Length = 922 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 269/944 (28%), Positives = 428/944 (45%), Gaps = 99/944 (10%) Query: 13 DVFSPATRDWFLRAFKQ--------PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 D+ PA ++W+L F + T Q + LV APTGSGKTL++F Sbjct: 32 DLLEPAVQEWWLEEFGEYVPENEGFFTPPQQGAIPKIHEGTNTLVCAPTGSGKTLSSFCA 91 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR--GET 122 +D L+R + + + LY+SP+K+L D+ RNL++PL+GI R G Sbjct: 92 IIDELYRRDRDA--DDGLENSVYCLYVSPLKSLANDIHRNLEVPLEGIESVVAERDDGAE 149 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 +R IR GDT + +R K+ P IL TTPE+L ++L S + RE LR VE VI+DE+ Sbjct: 150 MGEIRHAIRHGDTSSSDRQKMLEETPHILNTTPETLAILLNSPKFREKLRTVEYVIVDEI 209 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-------RPVT 234 H++A KRG HL++SLERL+A++ RIG SAT+ VA FL G RP Sbjct: 210 HSLAAGKRGTHLSVSLERLEAMVDHEITRIGCSATIEPLEGVAEFLVGRDEPGGDSRPYE 269 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 +V+ R I + P ++ + + + + H + Sbjct: 270 IVDARFAREFDIELECPTDDLIHTP--------------REVVQERFYRMLHEHIQEHTN 315 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 T+VFTN+R AE++ L E + A + + + Sbjct: 316 TLVFTNTRSGAERVLHNLREEFDAYDEEN----------------------------SGC 347 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGS+SK+ R E LK G L V +++SLELGIDM VDLV+QV +P SVA+ LQR+G Sbjct: 348 HHGSLSKDVRHDIEARLKEGSLDVVTSSTSLELGIDMPHVDLVVQVGSPKSVAALLQRVG 407 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 RAGH+VG G R +L++ AV+++ G +++++ P N DV AQ A Sbjct: 408 RAGHRVGQTVTGRVIALDRDELLECAVMLKKADDGFVDSVSIPENAQDVAAQHIYGMAIA 467 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET----- 529 + E +RRA P+++ +++ L+ Y + K+ + Sbjct: 468 EIRPESEVVGILRRAYPYRNYSDVEWESLARYLTADYAGLEDKNVYAKIWRDENDPPSGE 527 Query: 530 ---------GILTARPG--AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM 578 L + G A+++ +T+ GTIPD V +AG VG+LDE Sbjct: 528 HHHEEYPVGQPLIGKRGRLARVIYMTNIGTIPDSFTCDVKT-----RAGDEWVGQLDENY 582 Query: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638 + D+ LG + + +V V R +P W E ++LG I F Sbjct: 583 LDTLEKGDVFVLGGDHFEYRYRRGSKVYVDRTSAR-PTVPSWYSERLPLSSDLGREILAF 641 Query: 639 LHLLADGAFFSGT------IPPWLAEENTIANIQGLIEEQRNATG--IVPGSRHLVLERC 690 L + G + + +++++ I L E Q G V + L +E Sbjct: 642 QGELLERYDAGGPPRVRAWLREFPLDDDSVRAIARLFEHQLRYAGSESVSTTDRLAIEVV 701 Query: 691 RDE-IGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 RD + +HS YGR+V++ ++ +A R A+ V +D+G V +P Sbjct: 702 RDRDEYERHYYVHSAYGRKVNDGFSRLLAYRCAQEATANVRVAVADNGFVLSMPLNRKVD 761 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 + + E + + + +R A+ + L FR A R+L++ R G+ +Q++ + Sbjct: 762 VEGILEDLEADDVREDLRSALSGTDLLQRYFRINATRSLMILKRYKGYEKSASEQQVSSE 821 Query: 810 QLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATS 869 LL A+ DF VI ET RE L+D ++ LE ++ + EI + +P+P A Sbjct: 822 MLLGFAEDLEDFAVIEETYREILEDKLNVAELEEIVGDIAACEIAVERTLLDSPTPRAFG 881 Query: 870 LLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGEL 913 L + SD LAE ++ L E + +G+ L Sbjct: 882 L------ATLSASDVVLAEDESAALQAFHEHVLEEIGEEALRGL 919 >UniRef50_Q18G68 Lhr-like helicase n=2 Tax=Halobacteriaceae RepID=Q18G68_HALWD Length = 961 Score = 669 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 277/963 (28%), Positives = 434/963 (45%), Gaps = 124/963 (12%) Query: 15 FSPATRDWFLRAFKQ--------PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 PA ++W++ F + T Q + + E+ALV APTGSGKTLA+F L Sbjct: 43 LDPAVQEWWVSQFGRYVAENDGFFTPPQREAIPLVDNQENALVCAPTGSGKTLASFTAVL 102 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE----------- 115 + LF+ + R+ LYISP+K+L D+ RNL +PL GI + Sbjct: 103 NDLFKRARK--RDDGLENQVYCLYISPLKSLANDIHRNLDVPLSGIRERIIADAKSKSES 160 Query: 116 -----------------RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL 158 ++ +N+R IR GDT + ER ++ P IL TTPE+L Sbjct: 161 EIKTQSANTAATDGSSGSEEDVDSSINVRHAIRHGDTDSAERQRMLEETPHILNTTPETL 220 Query: 159 YLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 ++L + RE LRG+E VI+DE+H++A +KRG HL++SLERL+ L TS RIG SATV Sbjct: 221 AILLNAPKFREKLRGIEYVIVDEIHSLAANKRGTHLSVSLERLEELTETSPTRIGCSATV 280 Query: 218 RSASDVAAFLGG------DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHA 271 S V FL G R +V+ +R + + P ++ Sbjct: 281 EPLSTVGKFLVGYNNDGTPREYELVDTRFVREFDLSVECPTDDLIHTP------------ 328 Query: 272 GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA 331 G + + + H++TIVFTN+R AE++ + L Sbjct: 329 --RGKVQARFYDRLEQLIDDHKNTIVFTNTRSGAERVLSTLR------------------ 368 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 +R + D + HHGS+SK +R E LK+G L V ++SLELGIDM Sbjct: 369 ----------DRSDTFDESNSGCHHGSLSKTRRQEIESELKAGTLDVVTTSTSLELGIDM 418 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRL 451 VDLV+QV +P SVA+ LQR+GRAGHQ+G +G R +LV+ AV+++ +G + Sbjct: 419 PHVDLVVQVGSPKSVAALLQRVGRAGHQLGETVEGRVIALDRDELVECAVMLQKAESGFV 478 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 + + P DV +QQ A + + + + RA P+++ ++ L L+ Y Sbjct: 479 DRVFIPEGAHDVASQQIYGMAINEIRREATFRQILTRAYPYRNYGDDDWEELLRYLTADY 538 Query: 512 PSGDFSAFRPKLVWNRETG--------------ILTARPG--AQLLAVTSGGTIPDRGMY 555 D PK+ + L + G A+++ +T+ GTIPD Sbjct: 539 DGLDEKNVYPKIWRDTNDAPSGEHHYDEFPVGTPLIGKRGRLARVIYMTNIGTIPDSFSC 598 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 +VL ++ ++VG LDE+ + D+ LG + + +V V Sbjct: 599 TVLT-----RSEDKQVGTLDEDYLDTLETGDVFVLGGDRFEYRYRRGSKVYV-DRTSERP 652 Query: 616 RLPFWRGEGNGRPAELGEMIGDFL-----HLLADGAFFSGT-IPPWLAEENTIANIQGLI 669 +P W E +LG I F L ADGA + + + + N+ I + Sbjct: 653 TVPSWFSERLPLSYDLGREIASFQGEVINRLEADGATATRQWLDEFPIDTNSARAITRIY 712 Query: 670 EEQRNATGI--VPGSRHLVLERCRDEIG-DWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 ++QR TG V LV+E D R +HS YGRR ++ + +A Sbjct: 713 DQQRQYTGATSVSTDDRLVVEEELDRDSYRRRFYIHSTYGRRFNDGLSRLLAYHCAQQTN 772 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 A+ + +D+G +P A + EP + +R A+ + L FR A R Sbjct: 773 ANVKIAVADNGFTLVMPLNRKVDVGAVLESIEPAAVRSDLRSALDGTDLLKRYFRINATR 832 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMR 846 +L++ R G+ QQ++ + LL A+ F VI ET RE L+D ++ A+E +R Sbjct: 833 SLMILKRYKGYEKSAAQQQVSSEMLLSFAEELDSFAVIDETYREILEDKLNVDAIEEALR 892 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLG 906 + E+ + V +PSP A L + SD LAE ++VL ++ +G Sbjct: 893 NIQDDELIVETVEVDSPSPRAFGL------ATLAASDVVLAEDESAVLQEFHARVQAEIG 946 Query: 907 QVD 909 + Sbjct: 947 DEE 949 >UniRef50_Q0W7D8 ATP-dependent RNA helicase n=3 Tax=Euryarchaeota RepID=Q0W7D8_UNCMA Length = 937 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 246/963 (25%), Positives = 407/963 (42%), Gaps = 121/963 (12%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 ++ P R+ +PT Q + H L+IAPTG+GKT +A L A D L R Sbjct: 6 ELLDPRIREALSELGMTEPTGTQQKAIPAILSGGHVLLIAPTGTGKTESALLPAFDLLMR 65 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 E+ R+ ++LYI+P++AL D+ + + R ++L + +R Sbjct: 66 MSSEE------REGIKVLYITPLRALNRDMMKRM------------RWWAGRLDLNIDVR 107 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRG 190 GDT ER + PPDILITTPE++ ML SR RE L+ + VI+DEVH +A SKRG Sbjct: 108 HGDTTTHERRRQALKPPDILITTPETVQAMLMGSRMRENLKSLAMVIVDEVHELASSKRG 167 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIV 249 +A++LERL T +RIGLSATV + +VA FL G R +V + + Sbjct: 168 TQMAIALERLGRY--TEFRRIGLSATVGTPGEVAKFLAGTGREAQIVEVKLAKSLDFHVT 225 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 P D + A + ++ +D + R+RST++F N+R AE + Sbjct: 226 YPETIDSDKPLSKKLLTDPDIAAQIRTM--------IDLIKRNRSTLMFVNTRQSAEAIG 277 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 AR +L A HHGS+SKE R E Sbjct: 278 ARFRKLDQA---------------------------------IAVHHGSLSKEARIEAED 304 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 + K G++ +V TSS+ELGID+G +D VIQ +P V+ LQR+GRAGH +G S G Sbjct: 305 SFKDGKVNALVCTSSMELGIDIGDIDHVIQYMSPREVSRLLQRVGRAGHSIGETSSGTII 364 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRR 488 D ++ I AG++EN+ D LA Q A A + Y V + Sbjct: 365 TINEDDSAEAWAICRRASAGQIENINLYKKSYDALANQICAMALEYGDISATYVYETVCK 424 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 A P+ L R+ FD L L +L++ G++ + + + Sbjct: 425 AYPYAQLSRKEFDRVLQQL-----------VEERLIFLSPEGLIGRKAKTRTYMYENLSM 473 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIV 607 IPD + V + R +G LDE V + V I WRI ++T D+V V Sbjct: 474 IPDEKRFDVY-----DVITGRMIGTLDEAFVVNFADVGAIFITKGEMWRIVEVTEDRVRV 528 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG------TIPPWLAEENT 661 P +P W GE P + +G +A+ A + +E T Sbjct: 529 EPIENPQGEVPSWTGEEIPVPFSVAMEVGAIRRTVAEMAGSPEADIVRYLTSAYPTDEAT 588 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + +++Q VP + + +E I++++ +G +V+E + + Sbjct: 589 ARSYVRYVKKQVAGNYPVPSDQLVTVEEEE-----RTIMINACFGHKVNETLGRVVTALL 643 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFL-FEPEKLLQIVREAVGSSALFAARF 780 + +G ++ I +P A + EP + I+ + + ++ L + Sbjct: 644 ASRFGGGVAMEIDPYRIKLELPKRIRAADVAKMIADLEPIFVEPIIEKTLKNTLLLKWKM 703 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 A + + + +R+ +LL + + P+ E + E L D D+ Sbjct: 704 VHVARKFGALSRD-------VDYERISMEKLLNV---FEGTPMYEEAVNEILHDKLDIDN 753 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 +++ ++ GEI++ T SP + G E M AP + R+ VL+L + Sbjct: 754 AIKVLEKIRSGEIKVL---TGRLSPIGDAGFTGG-RELM----APESADRSIVLALKERI 805 Query: 901 LRN--LLGQVDPGELLDPQVIRQVEEE------LQRLAPGRRAKGEEGLFDLLRELGPMT 952 + + +L ++ + + ++ VEE RL + +E DL+++ Sbjct: 806 MNDHVILFCLNCKQFSSKRKVKDVEERPVCPLCNSRLIAALKPWEKEE-ADLVKKAAKNK 864 Query: 953 VED 955 + + Sbjct: 865 LAE 867 >UniRef50_Q46BX9 ATP-dependent RNA helicase n=4 Tax=Methanosarcinaceae RepID=Q46BX9_METBF Length = 955 Score = 647 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 251/959 (26%), Positives = 419/959 (43%), Gaps = 125/959 (13%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 + F P ++ F +PT Q +++ +H L+IAPTGSGKT +A L D + + Sbjct: 8 NTFHPKIQEAIKTLGFTKPTEPQERSFPHIMDGKHTLLIAPTGSGKTESAVLPVFDNILK 67 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 + E RK LYI+P++AL D+ ++I + ++++V +R Sbjct: 68 KKPEA------RKGISALYITPLRALNRDMLSRIEILGQ------------LLDIKVQVR 109 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRG 190 GDTP ER + ++NPPD+LITTPE+L M T SR R+ L V V+IDE+H +AGSKRG Sbjct: 110 HGDTPQSERQRQSKNPPDVLITTPETLQAMFTGSRLRQNLETVTHVVIDEIHELAGSKRG 169 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIV 249 LA+ LERL + QRIGLSATV + +++ FL G R TV+ ++ + +V Sbjct: 170 TQLAVGLERLVEISG-EFQRIGLSATVGNPWEISKFLAGNGRDFTVIEVALLKLLEFDVV 228 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 P + G E ++ I V +ST++F N+R AE L Sbjct: 229 NPQVSEKGKIREKEVLKIAKAVGCEPEFASHLLC-IRKIVEDSQSTLIFVNTRQSAEALA 287 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 A +L + HHGS+S E R E+ Sbjct: 288 AGFRKLGTS---------------------------------IGVHHGSLSFEARVEAEE 314 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 A KSG L+ ++ TSS+ELGID+G VD V+Q +P V+ LQR+GRAGH++ VS+G Sbjct: 315 AFKSGALKGLICTSSMELGIDIGNVDRVVQYGSPRQVSRLLQRVGRAGHKLHSVSRGTIV 374 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVDEWYSRVRR 488 D +S I + GR+E ++P LDV+A Q +++D+ ++R Sbjct: 375 SMEVDDTAESMAITKAALEGRVEEVSPHIKSLDVVANQIAGMVMDFGEIEIDKILRILQR 434 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE-TGILTARPGAQLLAVTSGG 547 P++DL +D + GD+ KL+W+ + + I+ R ++ + Sbjct: 435 TYPFRDLQLEELQRVVDQI------GDY-----KLIWHEKGSNIVKRRRKSREYYYENLS 483 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQI-----T 601 IPD Y + + + VG LDE V + I WR+ ++ Sbjct: 484 MIPDEKKYEIY-----DIVSGKSVGVLDEAFVVNFAEPGAIFITKGYMWRVVEMPDREQG 538 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--------DGAFFSGTIP 653 +D++ V P G + +P W GE P E+ + +G +A D A Sbjct: 539 KDRIKVEPVEG-TGEVPSWTGEEIPVPFEVAQDVGKLRAEIAAFIRAELDDDAIAEQLQA 597 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + N + + L+ E +P + +V+E D + L++ +G + Sbjct: 598 KYPVTRNAVLELIRLVREHVEGGFPLPDAETIVIEDEGDA-----VTLNACFGHNTNGTL 652 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL-FEPEKLLQIVREAVGS 772 A + + A +G+ + I +P G + L PE + I+ + + Sbjct: 653 ARVLTSLLSARFGSSVAQEVDPYRIKLTLPRRVGSFQIRDMLLSLRPEHVEPIIEMTLKN 712 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 + L + A + + R+ +LLEI Y + E +RE Sbjct: 713 TTLMKWKMVHVARKFGALSRDID-------YDRISMKKLLEI---YQGSSMYDEVIREIF 762 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD--APLAERR 890 D+ D+P + ++++L GEI + + P+P + A F + D AP R Sbjct: 763 HDLLDVPRTKEVLKKLAAGEISV---EVSLPTPIGS-------AGFAMKKDLVAPEKADR 812 Query: 891 ASVLSLDSELLRN--LLGQVDPGELLDPQVIRQVEEEL------QRLAPGRRAKGEEGL 941 + VL+L ++ + +L + + + ++ V EE+ R+ + EE + Sbjct: 813 SIVLALKERIMNDRIILFCTNCKKWTSRRQVKNVPEEIVCPVCESRMIAALKPWEEEEI 871 >UniRef50_UPI0001745EC8 large helicase-related protein (lhr-2) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745EC8 Length = 879 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 254/925 (27%), Positives = 390/925 (42%), Gaps = 112/925 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D PA WF F +PT Q T + L+ +PTGSGKTLA FL LD L Sbjct: 3 DSLHPALAAWFTGRFGKPTHAQEVTLPHVLAGQSVLLTSPTGSGKTLAGFLGVLDDLLHR 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E + +Y+SP++AL D+Q+NL PL + + ++R+G+R Sbjct: 63 ----LDEGPLPHQTLAIYVSPLRALTYDMQKNLSEPLHEMGLAQ--------DIRIGLRN 110 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGA 191 GDTPA ER+K + PP IL+TTPESL ++L RE L G VI+DE+HA+A +KRG+ Sbjct: 111 GDTPASERAKFRKQPPHILLTTPESLAILLPQEGYREILSGCRHVIVDELHALAENKRGS 170 Query: 192 HLALSLERLDALLHTSA-----QRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQ 245 HL+L+LERL+ ++ RIGLSAT ++A FL G R +V A R + Sbjct: 171 HLSLTLERLEQMVSAPPDGAGLVRIGLSATAAPLDELARFLCGTGRDCAIVQGRAERRRR 230 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + ++ P+ G + + V + RSTI+F N+R A Sbjct: 231 VEVLSPLRREP--------------YPPAGWTAQRVMKDLARLVEQKRSTIIFCNTRSGA 276 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E + RL + + +HH S+ ++ R Sbjct: 277 ESTSLRLKQALPE-----------------------------LASVIETHHSSLDRDLRL 307 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E LK+GELR VV ++SLELGID+GAVD + ++TP V+ +QRIGR+GH + S Sbjct: 308 EVEDRLKAGELRAVVCSTSLELGIDIGAVDCAVMISTPKGVSRAIQRIGRSGHNIHEESH 367 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 G+ DL++ V + +L+ + P DVLAQ V A D Y+ Sbjct: 368 GVLVATNVNDLMECVVCADMTRRTQLDAIRVLQKPYDVLAQHLVGMAMQKGYTRDTAYAT 427 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGD--FSAFRPKLVWNRETGILTARPGAQLLAV 543 V +A P+ +L R FD L + G S + + K+V + + ++T + + Sbjct: 428 VLQAWPYHELSRAEFDRVLQYVMGGGKSLEENYREVFGKIVEDAQGRLMTPNRKVERDYL 487 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 + GTI G V L G+RR+GE++E V + DI L + R+ + Sbjct: 488 VNIGTIASEGAVRVYL-------GTRRLGEVEESFVKNLKYGDIFVLAGRTVRLVETGVM 540 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------GAFFSGTIPPW 655 ++ V A GR +P W + L + + LA A + + Sbjct: 541 EITVEAADGRLPTVPSWNANKMPLASGLAQEVTRLRTRLAARLEANEPPAATSDWLVEDY 600 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW------------------ 697 L I Q + +P ++E R+ D Sbjct: 601 LISSVNADAIVKHCRNQCRFS-AIPTDSLFLIELYREPEDDGEEFREPEPSLMPPKRGAG 659 Query: 698 -----------RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTD 746 HS GR ++ + IA R+ G +A V D G + + Sbjct: 660 RAMRKPDPERCHFFFHSLIGRSANDALSRIIAHRVKEAVGGNALVTIDDYGFLLSVRQFQ 719 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 + LF + L +R A+ S L +FR A L++P PG L Q R Sbjct: 720 ELGLEEWRDLFHADNLEADLRSALAESQLVKWQFRGVAQTGLMVPRNLPGAERRLKQLRW 779 Query: 807 RASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSP 865 L ++ + PD P++ + +RE DLP + + + + Q+ +V T P Sbjct: 780 SGEILFQVLSKHEPDHPLLEQAIREATHVFLDLPRAAQFLAGAHQMQWQLIEVPVVT--P 837 Query: 866 FATSLLFGYVAEFMYQSDAPLAERR 890 F+ + + E M D A R Sbjct: 838 FSFGIYASKIKESMLLEDPEEAIER 862 >UniRef50_A8MBG3 DEAD/DEAH box helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBG3_CALMQ Length = 970 Score = 625 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 244/922 (26%), Positives = 392/922 (42%), Gaps = 111/922 (12%) Query: 14 VFSPATRD-WFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P ++ R F++ T Q + V ++ L+IAPTGSGKT AA L L Sbjct: 13 MLHPMVKELVVKRGFRELTEPQLKAIPVILSGKNTLLIAPTGSGKTEAALLPVLSMYL-- 70 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 K + ILYI+P++AL D+ R ++ + V L V +R Sbjct: 71 ----NMPQDKPRGIYILYITPLRALNRDLLRRIEW------------WASGVGLTVAVRH 114 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGA 191 GDT ER++ +RNPP +LITTPE+L ++ + SR RE + V+ VI+DEVH + KRG+ Sbjct: 115 GDTDKNERARQSRNPPQLLITTPETLQILFIGSRLREHISKVKWVIVDEVHELVEDKRGS 174 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIRIVV 250 L++ L++L AL Q IGLSA+V S S+VA FL G D V+N R+ Q ++ Sbjct: 175 QLSIGLQKLKALAG-RFQVIGLSASVGSPSEVAKFLVGNDEECEVINLSFTRNYQFDVIN 233 Query: 251 PVANMD--DVSSVASGTGEDSHAGREGSIWPYIETGILDEVL----RHRSTIVFTNSRGL 304 P ++ D++ + + ++ + +L + +S+IVF N+R + Sbjct: 234 PAVSLSNADINELKARYMIVNNINADELFHNDALARLLYVMNLIDDGGKSSIVFVNTRSM 293 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AE LT+R+ + + + HH S+S+ R Sbjct: 294 AELLTSRI-------------------------------LMINPTYPVSIHHSSLSRVNR 322 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 TE+ L+ G L+ VVATSSLELGID+G VD VIQ +P V +QR+GR+GH++ V Sbjct: 323 LNTEEMLRGGRLKAVVATSSLELGIDIGHVDQVIQYVSPHQVTRLVQRVGRSGHRLDKVP 382 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWY 483 KG+ D +++ IV AG LE P P DVL Q V+ M VDE Sbjct: 383 KGIIITEDINDTLEAIAIVNRARAGWLEPTKSPEKPYDVLFNQIVSLILMKPRWTVDEIL 442 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA----- 538 + V+ A P+++L R A L +S RP+LV+ E + +P + Sbjct: 443 NIVKGAYPYRNLTRDELIAVLRFMSEG--------LRPRLVYFIEEEGVVLKPRSPRSRI 494 Query: 539 --QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSW 595 + + IP+ Y V VG LDE + E W Sbjct: 495 ELREYFFNNLSMIPEEKQYLV-----TRVDTGEVVGVLDEAFMAEYGEPGIKFVFRGNVW 549 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------GAF 647 ++ I D + V PA +P W GE P E+ + +G ++ D A Sbjct: 550 ILRSIKDDVIYVEPAKDPVGAIPSWIGEEIPVPFEIAQDVGRLKRIITDELRNGASEDAL 609 Query: 648 FSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGR 707 S T+ I I+EQ G VP +++E+ +++H+ +G Sbjct: 610 ISRLTKELGVSRRTVKYIVSTIKEQLKY-GFVPTDDSIIIEKV-----GELVVVHASFGT 663 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL----FEPEKLL 763 V+ + +A + V I+ ++P G + + Sbjct: 664 LVNRTLSRLLASYMTHALDLPVRVQQDPYAIILQLPSKVGPGIIIESLRALANLSMSEFI 723 Query: 764 QIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPV 823 Q ++ + LF + A R ++ + L + Q PV Sbjct: 724 QYIKRIALETGLFKRKVVHVARRFNVIKSDKS----------VSDISLTNLIQALEGTPV 773 Query: 824 ILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD 883 +E LRE + D+ R+++ + G I++S + + SP A +L + + Sbjct: 774 YVEALREFITSDLDVDGAVRVLKSILDGTIKVSVIEGSEFSPMAREILSKASSRL--EVI 831 Query: 884 APLAERRASVLSLDSELLRNLL 905 AP + + S+ + LL L Sbjct: 832 APERLDKLIIESVKARLLNEPL 853 >UniRef50_Q649R1 ATP-dependent helicase n=4 Tax=environmental samples RepID=Q649R1_9ARCH Length = 961 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 265/1019 (26%), Positives = 408/1019 (40%), Gaps = 132/1019 (12%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 +P + + F PT Q + ++ L+IAPT SGKT AA L LD L R Sbjct: 13 NPIQKAIAEKGFSYPTEPQTRAIPYITEGKNVLLIAPTASGKTEAALLPVLDALIR---- 68 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 + ++LYI+P+KAL D+ LQ K + +LR+G+R GDT Sbjct: 69 ----TERGAGIKVLYITPLKALNRDMLERLQWWCKRL------------DLRLGVRHGDT 112 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLA 194 +ER PPDILITTPE+L ++ R R+ L V+ VI+DEVH +A KRG A Sbjct: 113 SNREREAQAMAPPDILITTPETLQAIIPGRIMRQHLAVVKWVIVDEVHELACDKRGTQFA 172 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVA 253 L+LERL L Q IGLSAT+ S VA FL G +R ++N P R + + P A Sbjct: 173 LALERLRYLKKAEFQVIGLSATIGSPDRVAKFLVGTERECEIINVPVARSIAVEVFYPRA 232 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + D A R + +E H+ST++FTN+R + E L +R Sbjct: 233 DSADYKLAEELYTYPEVAARLQLMKKLVE--------EHKSTLIFTNTRSITEILGSRFR 284 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 F+ HHGS+SK R E+ +K Sbjct: 285 VWDLN-------------------------------FLVGVHHGSLSKPSRLNVEKGIKD 313 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G+L+ ++ TSSLELGID+G +D VIQ +P V LQRIGR+GH++GG++ G + Sbjct: 314 GKLQGIICTSSLELGIDIGRLDFVIQYNSPRQVTRLLQRIGRSGHRIGGIANGAIVVQDS 373 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPW 492 D ++S VI LE P PLDVLA Q A +E + +++A P+ Sbjct: 374 DDALESLVICRKALIDDLEPAGIPERPLDVLAHQIAGLLMAQGRWSFEEALALIKKAYPY 433 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG----AQLLAVTSGGT 548 +DL + + L+ + R P+L+W + RP Sbjct: 434 RDLEEQELVSVLNYMHSRI---------PRLLWFSAEEKVFIRPKQIKPLYNYYFEHLSM 484 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRDQVIV 607 IP+ + V+ + + VG LDE V E + + G W+I + D++ V Sbjct: 485 IPEVRQFLVIDDD------DKPVGVLDEAFVAEYAKAGNKFIEGGRVWKILHVYGDRIYV 538 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------GAFFSGTIPPWLAEE 659 + +P W GE P + +G L + + + E Sbjct: 539 KHEDDPTGAIPSWVGEEIPVPYPVANEVGKIRGGLEEELESGKAVAEIGKELVQRYSCSE 598 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 TI + EQ VP + L LER + IIL +G V+ A+ +A Sbjct: 599 QTITRALDEVIEQEKGGYPVPTDKLLTLERWNE-----YIILQCSFGLLVNRTLAMILAT 653 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL-FEPEKLLQIVREAVGSSALFAA 778 I GA V I+ R AI L + ++ +++ S LF Sbjct: 654 VISDKIGAPVGVQQDPYRIMLRTESELEPEEVEAIILALSTGAIEKLAIDSLVRSRLFKH 713 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RF A R + + L L + + + V E +RE D+ Sbjct: 714 RFIHVARRFGAIVKKAS----------LSDLDLDNLIRSFEGSAVFNEAIREAQDKDVDI 763 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFA------------------TSLLFGYVAEFMY 880 L++++N GE++IS + SP A ++ YV + Sbjct: 764 KQTVGLLKQINEGELKISVLKGDDVSPVAGIVEVIKRGYELIPPDRMHKVIIKYVKARLL 823 Query: 881 QSDAPLAE----RRASVL---SLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGR 933 R +VL +D+ + +D +++++ +++ GR Sbjct: 824 DESLTFVCTNCWRYVAVLRIHDVDALQCPECESKRIGAVQVDEELVKREIRKVKSKKEGR 883 Query: 934 RAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLA 992 K +L+ G + LA + E+ LE AV +I E+ Sbjct: 884 VVKDAIKSAELVSNYGKAALLTLAGKGI-KPEDATEILEEEGAVNEHLIGLIIESEKEV 941 >UniRef50_B4D6Q0 DEAD/H associated domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Q0_9BACT Length = 844 Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 246/882 (27%), Positives = 392/882 (44%), Gaps = 81/882 (9%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 SP+ WF + PT Q W AR E+ L+ +PTG+GKT AAFL LD L + Sbjct: 8 SPSAFAWFADRYGTPTPAQEAAWPRIARGENILLASPTGTGKTFAAFLGVLDELVQLHAR 67 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 R +Y+SP++AL D+++NL PL+ + ++ +RV +RTGDT Sbjct: 68 ----GELRDAIHCVYVSPLRALSYDLEKNLLEPLRELYGDQ-------PPIRVQLRTGDT 116 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLA 194 + ER++ PP L+TTPESL ++L+ R L V +I+DE+HA+A +KRGAHLA Sbjct: 117 TSSERARQYTKPPHFLLTTPESLCVLLSQERWLVHLSRVRWLIVDEIHALAENKRGAHLA 176 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR-PVTVVNPPAMRHPQIRIVVPVA 253 LS+ERL QRIGLSAT+ +VA FL G ++ + + ++ + P+ Sbjct: 177 LSIERLAHHCG-QLQRIGLSATIAPLDEVARFLVGTHGTCATLDVSSSKKVKLSVHTPLR 235 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + G + + D + +H++T+VF N R AE T L Sbjct: 236 --------------KNPYPEAGYTGQRMIRELGDLIRKHQTTLVFCNVRSGAEATTYWLR 281 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E + + HH S+ ++ R E LK Sbjct: 282 ENF-----------------------------PDLADVIECHHASLERDVRRDVEDRLKR 312 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GELR VV ++SLELGID+G+VDLV+ ++TP V+ LQR GRAGH + +S+G+ Sbjct: 313 GELRAVVCSTSLELGIDIGSVDLVVMMSTPKGVSKALQRAGRAGHNIRSISRGILMATNI 372 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 DLV+S V A +L+N+ P +PLDVLAQ V+ + + + +R+A P++ Sbjct: 373 SDLVESCATVLLSRARQLDNVRMPESPLDVLAQHVVSMGCTEHWTRTDALALIRKAYPFR 432 Query: 494 DLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 DL +FD LD L+G S +S K+V + + G T + + + G IP+ Sbjct: 433 DLDAGMFDDVLDYLAGGGASLRQRYSEVFGKIVLDAD-GFRTREGRVRREFLQNIGVIPN 491 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 G V + +R +G ++E + + ++ D+ + R+++IT+ + VT A Sbjct: 492 VGQVQV-------RTKTRLLGSVEESFIRQIKIGDVFMIAGRPVRLEKITQMEAWVTKAD 544 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG-AFFSGTIPPWLAEE--NTIANIQGL 668 G +P W + + I F L + W+A+ AN + L Sbjct: 545 GALPTVPRWNANKMPLSNRVAQEINAFRKELRAAFEEGRKDVDKWIAKRLDCGKANAEIL 604 Query: 669 IE---EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 ++ Q + I LV E +E G HS GR ++ A I R+ Sbjct: 605 LKTHLAQHELSEIPTADFLLVEELEDEEQGALHYFFHSLIGRTSNDALARVITRRLSEAR 664 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G +A D G V + + L PE + + EA+ S + FR A Sbjct: 665 GGNAIATPHDYGFVLTVAKRQRFVEADFPRLLSPEGFDEALDEALRQSDMLKYHFRNAAQ 724 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERL 844 L++ + + + + A + + Q + P+ ++ E R+ LQ D Sbjct: 725 TGLMVYRNYFDRQKSVRKLQWSAEVIFNVLQQHEPEHVLMREARRDALQTFIDAEGAREF 784 Query: 845 MRRLNGGEIQISDVTTTTPSPFA-------TSLLFGYVAEFM 879 + +++ V P FA +LL E M Sbjct: 785 LIAQTRKPVRLRRVPMVPPLSFAMYATKIKEALLVEDPYETM 826 >UniRef50_C1RMK0 Lhr-like helicase n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMK0_9CELL Length = 924 Score = 610 bits (1572), Expect = e-172, Method: Composition-based stats. Identities = 350/716 (48%), Positives = 432/716 (60%), Gaps = 68/716 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D FS TR WF AF PTA Q W + +HALV+APTGSGKTLAAFL+ALD L Sbjct: 4 DRFSDPTRAWFTGAFAAPTAAQTGAWEAVSGGDHALVVAPTGSGKTLAAFLWALDGLL-- 61 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 A + R++Y+SP+KAL TDV+RNL+ PL G+ R G + VGIRT Sbjct: 62 --TGEAPADPTQRCRVVYVSPLKALATDVERNLRSPLVGVRQAATRLGRALPEVTVGIRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP ER +PPD+LITTPESLYL+LTS AR L GV TVI+DE+HAVA +KRGAH Sbjct: 120 GDTPPAERRAFATSPPDVLITTPESLYLVLTSAARRGLAGVRTVIVDEIHAVAATKRGAH 179 Query: 193 LALSLERLDALLHT-----SAQRIGLSATVRSASDVAAFLGGDRP-------VTVVNPPA 240 LALSLERLDALL AQR+GLSATVR VA+FLGG RP V VV PP+ Sbjct: 180 LALSLERLDALLEAEGGPGPAQRVGLSATVRPVDAVASFLGGARPPAEGGRQVVVVQPPS 239 Query: 241 MRHPQIRIVVPVANMDDVSSVASG---------------------------------TGE 267 + +++VVPV ++ D+++ A E Sbjct: 240 QKVIDVQVVVPVPDLGDLAAAARPGASGTTPGTVDRYGGPGIDPDLAGFGAPAPGAAPLE 299 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR-LQRSPSI 326 + SIWP++E ++D V HRST+VFTNSR AE+LTAR+NE++A R P Sbjct: 300 PVPSPPRTSIWPHVEERVVDLVAEHRSTLVFTNSRRGAERLTARINEVWAERRGGDVPDP 359 Query: 327 AVDAAHFESTSGATSNRVQSSDV--FIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 TS V + D +AR+HHGS+S+ +R TE LK+G L VVATSS Sbjct: 360 GAAQPAAAPGQSGTSAGVDTRDASTIVARAHHGSMSRAERTRTESELKAGRLPAVVATSS 419 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 LELGIDMGA+DLV+QV P SVASGLQR+GRAGHQVG VS+G+ FP R +LV +AV + Sbjct: 420 LELGIDMGALDLVVQVGAPPSVASGLQRVGRAGHQVGAVSRGVVFPTYRGELVAAAVTAQ 479 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 M G LE L P PLDVLAQQ VA AA+D VD+ VRRAAP+ L A L Sbjct: 480 RMRTGELEALAVPTTPLDVLAQQLVAMAAVDDWPVDDLARVVRRAAPFATLGDATLHAVL 539 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE--- 561 DML+GRYPS DF+ RP++VW+R +++ RPGA LAVTSGGTIPDRG++ V L Sbjct: 540 DMLAGRYPSEDFAELRPRVVWDRVADVVSGRPGALRLAVTSGGTIPDRGLFGVFLAGDAG 599 Query: 562 -----------GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 G G +RVGELDEEMVYESRV D TLG+++WRI+ IT D+V+VTPA Sbjct: 600 TSDVPADAERTGGRVRGGKRVGELDEEMVYESRVGDTFTLGSSTWRIEDITPDRVLVTPA 659 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--GAFFSGTIPPWLAEENTIAN 664 PG RLPFW+G+ GRPAELG +G ++ LA + N Sbjct: 660 PGVPGRLPFWKGDAPGRPAELGRALGAWVRELAALPDDGARERAEQAGLDPWAADN 715 >UniRef50_B1Y9J8 DEAD/DEAH box helicase domain protein n=5 Tax=Thermoproteaceae RepID=B1Y9J8_THENV Length = 937 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 251/1006 (24%), Positives = 418/1006 (41%), Gaps = 125/1006 (12%) Query: 8 SSLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 SS++ + P R+ R +PT Q + LVIAPTGSGKT A L L Sbjct: 9 SSVVFHLLHPLLREALKDRGISEPTEPQRMAIPEILAGNNVLVIAPTGSGKTETAMLPIL 68 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 ++ G E + +LYI+P++AL D+ +R R V Sbjct: 69 SKMLEGGVE-------KPGIYVLYITPLRALNRDLL------------DRIRWWGERVGF 109 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVA 185 RV +R GDT +R + ++ PP ILITTPE L ++T R E LR + V++DEVH +A Sbjct: 110 RVDVRHGDTDKADRQRQSKTPPHILITTPEMLQAIMTGRRLLEHLRELRWVVVDEVHELA 169 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHP 244 KRG L+++LERL + Q +GLSATV S +VA FL GD RP VV R+ Sbjct: 170 EDKRGVQLSVALERLRYHVGRDFQIVGLSATVGSPVEVAKFLVGDGRPFKVVLVSFARYM 229 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 ++ + P + +D R I +E +RST+VF N+R + Sbjct: 230 KLDVARPKPDEEDHKIAEVSGLFPDVVARLRYIKRLVE--------ENRSTLVFVNTRSM 281 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AE L R ++L+ + HH S+SK R Sbjct: 282 AELLGFRFSQLF-------------------------------NDLPIAVHHSSLSKMVR 310 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E+ LK GEL+ VVATSSLELGID+G VDLV+Q +P V LQR+GR+GH++ V Sbjct: 311 ISVEERLKKGELKAVVATSSLELGIDIGHVDLVVQYISPHQVTRLLQRVGRSGHRLTSVP 370 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWY 483 +G+ D++++ V+V+ +G +E P P DVL Q VA + +++E + Sbjct: 371 RGVVVGEDINDVIEAVVVVKRARSGLVEPTQIPRKPYDVLVNQVVAFLMLKPRWRLEELH 430 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ---L 540 ++RA P++DL + ++ Y P+L + E + ARP + Sbjct: 431 QVIKRAYPYRDLTIEELRRVVKFMNDLY---------PRLAFYYEDSDVVARPRGRGFYR 481 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQ 599 + IPD Y+V+ + VG LDE V E V W I Sbjct: 482 YFYETLSMIPDERQYAVVNEK-----TGELVGTLDESFVAEYGNVGVKFIFRGRPWLITG 536 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 I + V + +P W GE P E+ + +G L A G + E Sbjct: 537 IEERSIKVVEVSDPTGAIPSWIGEEIPVPYEVAQEVG-LLRRRAQGGDHRAIAEEYGVNE 595 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + I +EE G +P + +V+E+ R+ + +I+H+ +G +V+ + Sbjct: 596 DVARYI---VEEMSKHRGPLPDDKTVVIEQFRENV----VIVHAAFGTQVNRTLGKLVGE 648 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAA----IFLFEPEKLLQIVREAVGSSAL 775 + + GI+ + + + + ++ ++++ A+ S Sbjct: 649 LLIKALEKPVGIHQDPYGIIIQSAEPLAAELVGEQLRRLATLDVREIAELLKSALVKSGS 708 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 F R A + + + + ++ + + V E LRE L+ Sbjct: 709 FKRRILHVAKKMGAVDKDADVYSVSMS----------KLVEAFSGTVVFDEALRETLERD 758 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 DL +++R+ GEI + + SP Y+ E +Y+ + Sbjct: 759 LDLEHTVDVIQRMRNGEIAVVY----SASP-------TYLGEVLYEK------LSHRLEI 801 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEE-----LQRLAPGRRAKGEEGLFDLLRELGP 950 + E L+ L+ LL+ ++ V ++ L R+ + + Sbjct: 802 IPPERLKRLVLDSTKARLLNYTMLA-VCQDCGWHGLVRVGEVTELVCPRCGGVNVGVVRV 860 Query: 951 MTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDD 996 + ++L + +EEV E L + ++ + + +++ Sbjct: 861 VRSDNLEREAKRGAEEVRRTAELLRRYGWVGLYALASRLPIEAVEE 906 >UniRef50_B5ICF6 DEAD/DEAH box helicase domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICF6_9EURY Length = 890 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 220/907 (24%), Positives = 379/907 (41%), Gaps = 137/907 (15%) Query: 13 DVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 + P+ + + +PT Q + ++ L+++PTGSGKT AA L +L Sbjct: 3 ETLHPSIQKVLEEKGIFEPTEPQREVIPYILEGKNVLLVSPTGSGKTEAAMLPIFHKLV- 61 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 +YI+P++AL D+ + L+ K ++ LR+ +R Sbjct: 62 --------DGNYGKIACIYITPLRALNRDLLKRLEDFGK------------KLGLRIAVR 101 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRG 190 GDT A ER +L+ +PPD+LITTPE+ +M L R +E+L+ V+ V+IDE+H +A +RG Sbjct: 102 HGDTTAYERRQLSLHPPDVLITTPETFQIMFLGKRLKESLKSVKFVVIDEIHELASDERG 161 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 A LA+ LERL + T Q IGLSA+V + ++A FL + + +V + + I Sbjct: 162 AQLAVGLERLRKM--TRFQVIGLSASVGNPEEIAKFLSPNESIEIVKVKLRKRIDVNIRA 219 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + + + + +A +W +E+ + R+T+VFTN+R AE + Sbjct: 220 PQKKYEKEAQIMGS--DVDYASTLMEMW--------EEINKARATLVFTNTRCTAEDIGM 269 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 R L+A HHGS+S++ R E Sbjct: 270 RYRLLFAN-------------------------------PPIEVHHGSLSRKVRIEAEDK 298 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 K GEL+ ++ TSSLELGID+G VD VIQ +P V LQRIGRAGH++ VS+G F Sbjct: 299 FKRGELKALICTSSLELGIDVGIVDFVIQFNSPRQVTKLLQRIGRAGHRIDEVSRGTIFA 358 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRRA 489 T +L +SA I+ + GR+E++ PL VL Q VA A + + E Y ++ A Sbjct: 359 HTPVELWESASILSLLHEGRIESVKIREKPLMVLINQLVAMANSEGKMNAREAYEIIKNA 418 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 P+++L F+ L+ + K+ ++ G + + I Sbjct: 419 YPFRNLSFEEFEDILNFMKD----------IGKVWYDGIA--FGKTRGGREYFYQNISMI 466 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD +Y V+ G+ +G LDE V + + +WRI I D+V+V Sbjct: 467 PDEKLYKVITLHGDF------IGTLDESFVSTLNYGESFVMNGMAWRIVDIREDKVLVEY 520 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLI 669 A P W GE P ++ D +L + + W + N Sbjct: 521 LRD-IAMPPSWVGEEIPVPYQVASHEPDMKYL---NSAAKKILENWKMDWNE-------- 568 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 +V+E G+ + + G + + A+ ++ + G Sbjct: 569 -------------GRIVIEN-----GNGIVFIGVRGGSKANYTLALILSSILSQKIGESV 610 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 S I P + + + +VR +S LF F A + + Sbjct: 611 EFSVSPYHIALFNPHVNAPYIKELLEKLR--NVEGLVRLVAKNSRLFNYIFMHVAKKMGV 668 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + +++R ++++ Y P+ E L + D D+ + ++ ++ Sbjct: 669 IKKGAD-------MKKVRIEKIVDA---YKGTPLYKEVLNKMSFDYMDVEVVNLILEKIR 718 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN--LLGQ 907 G+ +I + S +L + + +P+ R + ++ LL +L Sbjct: 719 EGKTEIIVREMSDKSK----ILLEEHGDLV----SPIIATRPIIEAVQKRLLEEDMILAC 770 Query: 908 VDPGELL 914 + G+ + Sbjct: 771 LSCGKSI 777 >UniRef50_Q11PA5 ATP-dependent helicase n=2 Tax=Sphingobacteriales RepID=Q11PA5_CYTH3 Length = 813 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 197/860 (22%), Positives = 359/860 (41%), Gaps = 80/860 (9%) Query: 21 DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREA 80 WF +P Q TW LV APTGSGKT + + L ++ + + Sbjct: 8 AWFKNQKWKPHLFQQDTWKAMLEGYSGLVNAPTGSGKTYSVWFGILLEYLQKHPDYKTKT 67 Query: 81 HKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQER 140 ++ + ++I+PI+AL +++ +R + ++ V IR+GDT + ++ Sbjct: 68 --KQGLQAIWITPIRALAKEIE----------YSTKRSCIDLDIPFEVAIRSGDTTSAQK 115 Query: 141 SKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLER 199 +K +N P +L+TTPESL+L+L+ + + + + TV++DE H + GSKRG + L+L R Sbjct: 116 TKQKKNMPQLLVTTPESLHLLLSQKGYADVFKNLSTVVVDEWHELIGSKRGVQMELALSR 175 Query: 200 LDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDD 257 L L + + G+SAT+ + + L G P ++ + +I V P + Sbjct: 176 LKGL-NPMLKIWGISATIGNLEEAKDVLLGKYGNPTKMIRAELPKRVEIETVFPDKIENF 234 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 S GT + ++ + S ++FTN+R +E +L + Sbjct: 235 PWSGFVGTK--------------LVPKVIPIIHNSHSVLIFTNTRSQSEIWYRQLLD--- 277 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 V + HHGS+ ++ R E L +G+L+ Sbjct: 278 --------------------------VAPEFAGLIALHHGSLDQKTRTWVEDNLHAGKLK 311 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLV 437 V+ TSSL+LG+D AVD V+QV +P VA +QR GR+GH G +SK F P +++ Sbjct: 312 AVICTSSLDLGVDFSAVDTVVQVGSPKGVARFMQRAGRSGHSPGALSKIYFVPTNSLEII 371 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 + A + E + +E+ P DVL Q V A D + + Y +++ + + Sbjct: 372 EGAAMREAIKRNVVESRVPYVRSFDVLVQYLVTLAVSDGFRPEIIYEEIKKTFCYASVTP 431 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 F L ++ S D K++ +T+R A S GTI V Sbjct: 432 EEFAWALQFITNGGNSLDAYDEFHKVIIEEGIYKVTSRAIATR-HRLSMGTIVSDSAMQV 490 Query: 558 LLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 G +R+G ++E + + + D+ + I I V+V + + + Sbjct: 491 KYMSG------KRLGSIEESFISKLKPGDVFWFSGNNLEIVHIHHMDVLVRKSKAKKGMI 544 Query: 618 PFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG 677 P W+G ++L EMI + D L E + + Sbjct: 545 PSWQGGRMPLSSQLAEMIRYKIDHFFDAGAIEEEELNKLKELFDL----------QAKRS 594 Query: 678 IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG 737 +P ++ ++E + G + + ++ GR VHE A ++ +I + SV +D G Sbjct: 595 HLPTNKEFLIEYVQSREG-YHVFMYPFEGRFVHEGMAAIVSHKISEIQPITFSVAMNDYG 653 Query: 738 IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGH 797 + LF + L + ++ +V ++ + RFRE A+ A L+ PG Sbjct: 654 FELLSDQEIPIEEALELDLFNIDNLEKEIQLSVNATEMARRRFREIASIAGLVFQGYPGK 713 Query: 798 RTPLWQQRLRASQLLEIAQGYP-DFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 + A ++ + Y + ++ + E L ++ + + R+N E ++ Sbjct: 714 SAKTRHLQANAELFFKVFEQYDSNNLLLRQAYDEVLDFQLEIRRMRKAYNRIN--EQKLV 771 Query: 857 DVTTTTPSPFATSLLFGYVA 876 V P+PFA ++ + Sbjct: 772 LVRPDKPTPFAYPIMVDRMR 791 >UniRef50_B1L6H5 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6H5_KORCO Length = 958 Score = 584 bits (1505), Expect = e-164, Method: Composition-based stats. Identities = 227/907 (25%), Positives = 376/907 (41%), Gaps = 112/907 (12%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 ++ D L P A RD + + T +Q + R ++ L+IAPTGSGKT AA Sbjct: 2 NSEDIFKLFPKCLISAIRD---KGITELTEIQRKGIPYVMRGDNVLLIAPTGSGKTEAAI 58 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 + ++ E ++ +LYI+P++AL D++ +R + Sbjct: 59 WPIISKILAEN--------EKMGFLLLYITPLRALNRDLE------------DRIIFWAS 98 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 + L VG+R GDT ER + + +PP+I+ITTPE+L +ML+S + L V+ V+IDEV Sbjct: 99 KCGLNVGVRHGDTLKSERQRQSESPPEIIITTPETLQIMLSSPKLSLHLSRVKYVVIDEV 158 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 H + KRG L+++LERL + QR+ LSA++ + +F + VV Sbjct: 159 HELLDDKRGVQLSIALERLKRITRRDFQRVMLSASLGNPHLALSFFSYSKKGEVVTSGEE 218 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R I+++ P +D+ + E R + D + RS IVFTN+ Sbjct: 219 RKMIIKVIFPKVAEEDLRLSSKLLLEPDAIARVRV--------LADAIRSSRSAIVFTNT 270 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R +AE L R++++++ HH S+S+ Sbjct: 271 RSMAEALGYRMSKIFSE-------------------------------LKIHVHHSSLSR 299 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 E R +E LK GEL V++TSS+ELGID+G +D+V+Q +P LQR+GR+GH Sbjct: 300 EARVESESLLKMGELSAVISTSSMELGIDVGHIDMVLQYGSPRQALKLLQRVGRSGHGPR 359 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD-ALQVD 480 GV++GL + D ++S V+ + G+LE + P DVL V + L V+ Sbjct: 360 GVARGLIVAQDSDDFLESLVLSKNALEGKLEEIRPLEKSYDVLYHTIVGMLLRERELSVN 419 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + P++DL L +S + P++VW + + + R ++L Sbjct: 420 DIVKVANGCYPYRDLSAEDCRKLLSFMSRAW---------PRVVW-YDENMDSVRRASEL 469 Query: 541 ---LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESR-VNDIITLGATSWR 596 + TIP+ YSV+ ++ +G+LDE V E + WR Sbjct: 470 AFDYFFNNVSTIPETVGYSVV-----DEITGFYIGKLDEAFVLEYLFPGAKFVFRGSVWR 524 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG-------AFFS 649 +++I + V +P W GE E+ +G + + + Sbjct: 525 MKRIEGGTIYVEQVFDPIGAIPSWIGEQLPVSMEVASEVGRLRGRVEEAYRRGKLDSLSH 584 Query: 650 GTIPPWL-AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRR 708 + + E I I E +P + +V+E R +++HS YG Sbjct: 585 EIAKEYGFSTEEDIRRALSPILEHIEGGFPLPTDKRIVVEDVR-----GGVVIHSTYGNL 639 Query: 709 VHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVRE 768 V+ AIA + + V I+ ++ + + E E+ E Sbjct: 640 VNRTLGRAIAQAMLKRFKLLVRVSEDPYRILVLGVSSEPIVNVMKSLVGEGEEF---FLE 696 Query: 769 AVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETL 828 A+ +S+ F R R L+ L ++A+ Y P E L Sbjct: 697 AIENSSFFRLRLLHTLKRMGLIKDYASSKIIS----------LNKLARAYEGTPPYEEAL 746 Query: 829 RECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE 888 RE L +D+ L+R + EI++ PSP A L G + P AE Sbjct: 747 RETLIKDFDIEGAMELLRCIEREEIEVVRSEKEGPSPLA---LLGLDRSGLPLEVIPPAE 803 Query: 889 RRASVLS 895 +L Sbjct: 804 LSRRLLE 810 >UniRef50_O29116 Large helicase-related protein (Lhr-1) n=2 Tax=Archaeoglobaceae RepID=O29116_ARCFU Length = 892 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 213/849 (25%), Positives = 366/849 (43%), Gaps = 110/849 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 ++ T +Q + + + L+IAPTGSGKT AA + + + + K Sbjct: 12 AAGIEELTELQLEAFRKILSGKDVLIIAPTGSGKTEAAIIPIFEAMLK--------MEKP 63 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 + +YI+P++AL D+ R + R + +RV +R GDTP +R++ Sbjct: 64 EGIVAIYITPLRALNRDMLRRI------------RGIAEFLGIRVDVRHGDTPDSQRARQ 111 Query: 144 TRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 +R PP +LITTPE+ ++ + R+ L+ V V++DE+H + S+RG L+++LERL Sbjct: 112 SRKPPHLLITTPETFQILFLGKNLRKALKNVRYVVVDEIHELIDSERGVQLSVALERLRE 171 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 + Q IGLSATV V+ F+G D V A + +I +V P + +A Sbjct: 172 M--ARFQTIGLSATVSRPKLVSRFVGADAEVLEWK--AEKEYEIEVVKPEVD----EKLA 223 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 + G D+ E I D V H S ++F N+R AE L +L +L Sbjct: 224 AKLGVDAEIAGELKF-------IADAVKEHGSALIFVNTRQTAEALGIKLKKLID----- 271 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 HHGS+S+E R E+ GEL ++ T Sbjct: 272 -----------------------------VEVHHGSLSRETRVEAEERFAKGELDALICT 302 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SS+ELGID+G V+LV+Q +P +QR+GR+GH +G VSKG + D+++SAVI Sbjct: 303 SSMELGIDIGHVNLVVQYNSPRQAVRLVQRVGRSGHGLGRVSKGYVVASSFDDILESAVI 362 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFD 501 V G LE+ DVLA Q A A + ++ + V+RA P+++L FD Sbjct: 363 VRRAKEGLLEDAEIHFKSFDVLANQICALALEYGRIDAEKAHRIVKRAFPYRNLTFEEFD 422 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 + L+ K+ ++ G + AR + + IPD Y V+ Sbjct: 423 EVCNFLAR----------IGKIFYDE--GEIGARRNTRRYFYENISMIPDEKHYRVV--- 467 Query: 562 GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWR 621 + + + +G LDE + +I + WR+ + + V V P +P W Sbjct: 468 --DVSSGKTIGSLDESFLSTFS-GEIFAMKGELWRVLSVD-EVVRVEPVSAE-GEIPSWV 522 Query: 622 GEGNGRPAELGEMIGDFLHLLADGAFFSGTIP--PWLAEENTIANIQGLIEEQRNATGIV 679 GE P E+ + +G + LA G L + ++ + + EQ V Sbjct: 523 GEEIPVPFEVAQEVGMLRNWLAGLIKAKGEKAALKALGAKGDVSVVVKTLREQIEKGFAV 582 Query: 680 PGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 P H+ +E + +++++ +G +V+E +A + A G+ +V I Sbjct: 583 PYDSHITIEGSENV-----VVVNACFGHKVNETLGRILALLLTARRGSSVAVEIDPYRI- 636 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 ++ + ++ + +PE + + AV + L + A + + Sbjct: 637 -KLSPAKPEEVESILKSIQPEAVESLAERAVFDTRLMQWKVVNAARKFGFLSK------- 688 Query: 800 PLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVT 859 + L + + D P+ E LRE + D+ ++ +++ GEI++S Sbjct: 689 ---EDELSRINVRSLVVKLKDTPIYREALREIFVEKMDVERTAEVVEKISSGEIEVSVYN 745 Query: 860 TTTPSPFAT 868 +P A Sbjct: 746 ELSPISLAA 754 >UniRef50_B1ZZM6 DEAD/H associated domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZM6_OPITP Length = 900 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 247/943 (26%), Positives = 378/943 (40%), Gaps = 119/943 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + S L P WF R F + Q L+ +PTGSGKTLA Sbjct: 6 VTSPAFTESRLYAALHPDLAAWFRRRFAHFSPAQLHAVPEVLAGNSLLLTSPTGSGKTLA 65 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL D L R +Y+SP++AL D+++NL P++ + + Sbjct: 66 AFLSVFDWLARARDR----GELPNGIVAVYVSPLRALAYDLRKNLAEPVRELGWDW---- 117 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 LRVG RTGDT ER+ R PP I +TTPESL LML+ +I D Sbjct: 118 -----LRVGARTGDTSPAERAAQRRKPPHIFVTTPESLTLMLSQPGWIAAFTSTRFLIAD 172 Query: 180 EVHAVAGSKRGAHLALSLERLDAL-------------------------------LHTSA 208 E+HA+A +KRGA LA++ ERL+ + Sbjct: 173 ELHALAENKRGAMLAVAAERLEEFPIAERRSPNVPAPPPHVPGDPTASSQSAIENQKSKI 232 Query: 209 QRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 RIGLSATV VAAFL G RP + + +I + P+ Sbjct: 233 IRIGLSATVAPLETVAAFLVGPGRPCRIAEVTQTKPAKIEVFSPLR-------------- 278 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 + G + + + +H++T+VFTN+R AE + RL +L Sbjct: 279 EHAYPPAGYTATRVLAELSVLLEKHKTTLVFTNTRSGAESIGLRLKQL------------ 326 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 + + HH S+ + R E LK GELR VV ++SLE+ Sbjct: 327 -----------------RPELSDLIEVHHASLDRGVRLEIEDRLKRGELRAVVCSTSLEM 369 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GID+G++D+V+ V+ P V+ LQRIGR+GH +G +S G+ DL + AV M Sbjct: 370 GIDIGSIDVVVMVSAPKGVSRALQRIGRSGHSMGRISHGILVASNINDLAECAVTARMMA 429 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 LE + NPLDVLAQ V A + DE ++ VRR+ P++DLPR F+ L L Sbjct: 430 RRELEPVKIHENPLDVLAQTLVGLAIFGSETPDEAFALVRRSYPFRDLPRATFERVLRYL 489 Query: 508 SGRYPSGD--FSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK 565 G S + + K+ + ++ P + GTI M + L Sbjct: 490 RGGGVSLERNYENVFGKVRVDASGQLVLTSPRVARSFYQNIGTINTESMVQIRL------ 543 Query: 566 AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGN 625 G R +G+++E + R D+ L R+ + V A +P W Sbjct: 544 -GRRNLGQVEESFMRGLRPGDVFVLNGRCVRLVKTHLLSAQVVRADHALPTVPRWYANKM 602 Query: 626 GRPAELGEMIGDFLHLLADGAFFSGTIPP-------------WLAEENT--IANIQGLIE 670 + L + +A S +PP WL E AN + LI+ Sbjct: 603 PLASGLAAEVVRLRTEVAKRLGGSAGVPPASGQPAGETPALSWLRSEYGLSAANARALID 662 Query: 671 E--QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 + +P + ++ER R E H+ GR ++ + +A R+ +L G + Sbjct: 663 HFSLQAQISAIPTAGVFLIERYR-EGDLLHYFFHALIGRSANDALSRIVAQRVQSLKGGN 721 Query: 729 ASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARAL 788 A V D G + + L + +R A+ ++L +FR A L Sbjct: 722 ALVTIDDYGFLLSLRSFQAMEEPELRTLLVRDGAEDALRLALADASLVKWQFRGVAQTGL 781 Query: 789 LMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRR 847 ++P R G + A + E+ + + PD P++LE E DLP + + Sbjct: 782 MVPRRVHGVERGTRMLQWSAEIIFEVLREHEPDHPLLLEAYAEATLRFLDLPRALGFLEQ 841 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERR 890 ++ ++ SPF+ + + E M D R Sbjct: 842 VD--RLRWDIRDLPRVSPFSFGIYVSKIKETMTLEDPETTIER 882 >UniRef50_A4CH41 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=13 Tax=Bacteroidetes RepID=A4CH41_9FLAO Length = 834 Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats. Identities = 216/898 (24%), Positives = 378/898 (42%), Gaps = 78/898 (8%) Query: 1 MADNPDPSSLLPD--VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 MA P+ PD DWF R P Q +TW H L+ APTGSGKT Sbjct: 1 MAGPKHPTGQPPDTDALMAIASDWFKRQGWDPFPFQHKTWAAFMEGRHGLLNAPTGSGKT 60 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 A + L R+ +K + ++I+P++AL ++ ++ + + + Sbjct: 61 YALWFPILLEYMRQHPNFRDG--HKKGLKAIWITPLRALSREIHQSAERITRDL------ 112 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVI 177 ++ VGIRTGDT + ER++ + PD+LITTPESL L+L ++ ++ ++ Sbjct: 113 ----DIPFEVGIRTGDTSSAERARQRKILPDLLITTPESLQLLLATKGYKKLFADCYAIV 168 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +DE H + GSKRG + L+L RL + + G+SAT+ + L G + N Sbjct: 169 VDEWHELLGSKRGVQMELALSRLKTICPA-LRIWGISATIGNLEQARQVLLGPESGALEN 227 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 +R + V S+ T E G + ++ ++ + ++T++ Sbjct: 228 SVLIR-------AQIDKKITVRSIIPDTMET--FPWRGHLGLHLLEHVIPIIRNSKTTLL 278 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 FTN+RG E L L++ P +A D HHG Sbjct: 279 FTNTRGQCEIWFRAL-------LEKHPELAGD----------------------IAMHHG 309 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 S+ K R EQA+++ LR VV TSSL+LG+D V+ V+Q+ P VA LQR GR+G Sbjct: 310 SIDKATRNWVEQAIRNESLRAVVCTSSLDLGVDFAPVETVVQIGGPKGVARFLQRAGRSG 369 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 H+ G S F P +L++++ + + + +E+ P DVL Q A D Sbjct: 370 HRPGRESVIYFLPTHAMELIEASALQQAVRKQAVEDRIPYLASYDVLVQYLTTLAVSDGF 429 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLS-GRYPSGDFSAFRPKLVWNRETGILTARP 536 +E Y V ++ + R ++ L+ L G + ++ V +T R Sbjct: 430 LPEEIYREVTGTFCYQAMSREDWEWLLNFLVMGSQSLASYDEYKKVEVLPDGLFKVTNRG 489 Query: 537 GAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWR 596 A GTI +V +G +G ++E + + D+ T + Sbjct: 490 VAMRHRFQ-IGTIVGDAHMTVKYQKGGY------IGTIEEWFISKLNPGDVFTFAGRNLE 542 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWL 656 +I V + +++++P W G +E+ E++ + L+ P Sbjct: 543 FIRIRDMVAQVRNSSRKTSKVPSWMGGRLTLSSEMSELLREELY---------SHRRPAG 593 Query: 657 AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVA 716 + I ++ L + Q+ + IVPG ++E + G + + + GR VHE A Sbjct: 594 EQSREIRSLDALFKRQQLES-IVPGPDQFLIETFQSREG-YHHLFYPFEGRFVHEAMASL 651 Query: 717 IAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALF 776 ++ RI L S+ +D G LF PE LL +++++ ++ + Sbjct: 652 LSYRISLLSPITFSLAYNDYGFELLSDRELNIGVILDNDLFSPEYLLDDLQKSLNATEMA 711 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDV 835 +FR+ A + L+ P + + + L E+ + Y PD + + RE + Sbjct: 712 RRKFRDIAVISGLVFTGYPKKGIKMKHLQSNSQLLFEVFRDYEPDHLLFRQAFRETFEHQ 771 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 + L + + R++ EI T PF+ ++ + E + S LA+R + Sbjct: 772 LEEGRLRKALERISRQEILWKACEKYT--PFSFPIITDRLREKL--SSEKLADRIRRM 825 >UniRef50_A8M9R8 DEAD/DEAH box helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M9R8_CALMQ Length = 926 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 242/882 (27%), Positives = 382/882 (43%), Gaps = 119/882 (13%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 ++ P ++ +++PT VQ + EH L+ +PTG+GKT AA L L + Sbjct: 7 ELLHPKVKEAVKELGYEKPTKVQELAIPIVLTGEHTLISSPTGTGKTEAALLPVLSMMLN 66 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 G R+ RILYI+P K+L D+++ + RR + + L + +R Sbjct: 67 SGV--------REGIRILYITPAKSLNRDLEQRI------------RRLSSLLGLTIAVR 106 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRG 190 GDT + ERS+ RNPP ILITTPE+L ++L S R LRGV VIIDEVH + GSKRG Sbjct: 107 HGDTTSSERSRQRRNPPQILITTPETLQILLVSPVMRNWLRGVGWVIIDEVHELLGSKRG 166 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIV 249 LA+ LERL L QRI LSAT+ ++ +GG R V +VN Sbjct: 167 VQLAVGLERLVELAG-EFQRIALSATIGDLELASSLVGGVGRGVRIVN------------ 213 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSRGLAEKL 308 V+ V+ H R S I + V R S ++FTN+R +AE L Sbjct: 214 --------VNDVSRTMELTIHYLRPDSDIEEAARRISEVVNRYGGSVLLFTNTRDMAELL 265 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L + + +HGS+S+E+R E Sbjct: 266 GTELKK---------------------------------VINGVEVYHGSLSRERRETVE 292 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + L++GE++ VV+TSSLELGID+G+++ VIQ +P +QR+GR+GH+VGGV+KG Sbjct: 293 EGLRNGEVKVVVSTSSLELGIDIGSIEAVIQYMSPKQSDRLIQRVGRSGHEVGGVAKGHV 352 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPH-NPLDVLAQQTVAAAAMDA--LQVDEWYSR 485 F T D ++S V+ G LE P H +DVL Q + V++ Y Sbjct: 353 FTVTPDDYLESLVLARRAIEGELEGDYPYHAGAMDVLLHQLAGIILDHGGSVTVNDAYRI 412 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 ++RA P+ L + +FS+ KL+ N + G+L R G ++ + + Sbjct: 413 IKRAHPYSSLQLSDLMRLI----------EFSSRELKLIGNYD-GVLRNRRGLRIYYLQN 461 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 IPD + + +GELDE+ N +I L WR+ I +D+ Sbjct: 462 VSMIPDERRFKAV-----NYMDKSTIGELDEDFALTLEQNKVIVLAGRLWRVLTIDKDEG 516 Query: 606 IVTPAP--GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA 663 ++T LP W G+ E+ + + L G S + Sbjct: 517 VITLDELRSGEGELPEWIGDEIPVSYEVAQEVCRLRRRLLAGGSLSS------FNRIKLM 570 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 NI L+E+ R + + G V E E I++HS G + +E + + G + Sbjct: 571 NINELLEDVRELSSDLRGKYPDVNETLI-EYSSNLIVIHSCLGTKGNEALGLYLTGYLTG 629 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 S V ++ + P + + + + +R + +S L+ RF Sbjct: 630 RLALSISYVRDPYRVIIKTPRPINPEIIRRALQEDVDTVEETLRNVIKNSNLYRYRFIHV 689 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALER 843 A R ++P T + +L ++ Y + + E + E D DL AL R Sbjct: 690 ARRMGVLPKGTID---------VNVDRLTKV---YNESVLDNEVINEIEVDKLDLDALRR 737 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 + + G I+++ + PS A ++ G + + P Sbjct: 738 FINGIKDGVIKLNFL-ARKPSKLALMVMGGLGTRSIITDEVP 778 >UniRef50_A1RT46 DEAD/DEAH box helicase domain protein n=5 Tax=Thermoproteaceae RepID=A1RT46_PYRIL Length = 916 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 240/867 (27%), Positives = 362/867 (41%), Gaps = 122/867 (14%) Query: 14 VFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P + + PT +Q + H L+IAPTG GKT AA + ++ Sbjct: 5 LLHPKLQKAIKELGYLTPTPIQTEGIPRILSGSHVLLIAPTGFGKTEAALFPIISKMIET 64 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 R +YI+P+++L D+ R L V L + IR Sbjct: 65 SNVS--------GIRCIYITPLRSLNRDLLRRLYALADA------------VGLSIAIRH 104 Query: 133 GDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGA 191 GDT +ER + PPDILITTPESL L+L + RE LR V VI+DE+H + SKRG Sbjct: 105 GDTTQKERKAIAVRPPDILITTPESLQILLLHRKLREHLRNVRFVIVDEIHELINSKRGV 164 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVV 250 LA+ LERL L QR+GLSATV + VA FLGG R V +V+ + +I V+ Sbjct: 165 QLAIGLERLVELAG-EFQRVGLSATVGAPQLVADFLGGVGRKVEIVDVSGEKRLEIDTVL 223 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ + +D R I Y+ + + ++FTN+R AE L + Sbjct: 224 PMPSEEDHIDAEKFDVTPETLARIRKIAEYLRS-------SKGAVLIFTNTRDGAEFLAS 276 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 +L + ++ HH S+S+E R E+ Sbjct: 277 KLRSILGDSVE--------------------------------VHHSSLSREHRISVEER 304 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK G L+ VVATSSLELGID+G +DLVIQ +P V+ +QR+GR+GH + +S+G+ Sbjct: 305 LKKGRLKAVVATSSLELGIDVGHIDLVIQYGSPRQVSKLVQRVGRSGHGLDKISRGIIVA 364 Query: 431 RTRRDLVDSAVIVECMFAGRL-ENLTPPHNPLDVLAQQTVAAAAM-----DALQVDEWYS 484 DL+++ VIVE GRL E + N LD+L Q V A + +D Sbjct: 365 SDFEDLLEAEVIVERALKGRLEEEVEYHENALDILLHQIVGIALEAKVDGKEINLDYILK 424 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 VRRA P+++L LD A R KL+ L R + Sbjct: 425 VVRRAHPYRNLTEEDIRLVLDF-----------AERHKLLRG-----LKPRRHSIRYYFE 468 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 + TIPD Y L ++ R VGELD E VY I L W + D Sbjct: 469 NVSTIPDEKSYKAL-----DETTGRIVGELDSEFVYSIEPGTKIVLSGRVWVFSRKENDA 523 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 V + P LP W GE P E+ + + + + LA EN + Sbjct: 524 VYLYPDFDVKGALPAWLGEQIPVPYEVAQEV---------CIRRAEVLQKALAGENELGL 574 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 +E + +VP L + +G+ ++HS G + +E + ++ + Sbjct: 575 DLEGLEAE-----LVPTPERLHIH----VLGNKYAVIHSCLGTKGNEALGLYLSHALSG- 624 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 + + ++ D +F E + + +R A+ +S +F RF + A Sbjct: 625 YVGPVGYRSDAYRVLLIFRDYVPINAIEEVFRKPQEFVYRTLRNAIKNSKIFRYRFLQVA 684 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 R ++ P ++ + Y D LETL E + D+ A+ L Sbjct: 685 RRVGIVSK--DAQEIPT-----------KLIEIYLDDLPGLETLNEMFVERVDVKAMISL 731 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLL 871 + +L+ G I I P+ +L Sbjct: 732 IEKLSNGRIPIVVRKLQRPTLLEKPIL 758 >UniRef50_C5A764 ATP-dependent helicase, lhr-like protein (Lhr) n=8 Tax=Thermococcaceae RepID=C5A764_THEGJ Length = 926 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 225/871 (25%), Positives = 362/871 (41%), Gaps = 112/871 (12%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 P R F + +Q ++ + + L+IAPTGSGKT AA L + + EG Sbjct: 2 HPLLRKAIRERFGRLNRLQQDSFREVSSGKSVLIIAPTGSGKTEAAVLPVFNEILEEG-- 59 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 K LYI+P+KAL D+ L+ ++ + V +R GDT Sbjct: 60 -------LKPISALYIAPLKALNRDLLERLEW------------WGRKLGITVEVRHGDT 100 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLA 194 A ++K T+NPP +LI TPE+L ++LT ++ R+ L V+ VI+DE+ + +KRG+ L Sbjct: 101 SAHRKAKQTKNPPQMLIITPETLGVILTVKSLRKHLENVKFVIVDEIAELVDNKRGSQLL 160 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L+LERL + +RIG++ATV + +V +L + T+V P + + ++ P Sbjct: 161 LNLERLAEI--ADFKRIGMTATVGNEEEVRDWLKAE---TIVKPNWKKSYRFHVLYPKPK 215 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 +D + A R +W +E +H ++FTN+R AE L RL Sbjct: 216 EEDKELAEKLSVSPEIASRLRVLWEIVE--------KHGKALIFTNTRQFAEVLAHRLKA 267 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 HHGS+SKE R E+ALK G Sbjct: 268 WGK---------------------------------PVEVHHGSLSKEARVRAEKALKEG 294 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 +++ ++ TSS+ELGID+G VD+VIQ +P V +QR+GRA H++G VS+G Sbjct: 295 KIKALICTSSMELGIDIGDVDVVIQYMSPRQVNRLVQRVGRAKHRIGEVSEGYIIATNVE 354 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWK 493 D + S VI + GR E + P LDVLA V L + Y +RA ++ Sbjct: 355 DYLQSLVIAKRALEGRFEAVEPIGG-LDVLAHFVVGLLIEYKRLPRERPYEIAKRAYVYR 413 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 DL + L +L G ++ E+ +L R GA + TIPD Sbjct: 414 DLSWSDYLDVLRVLEDARLVG----------YDEESNLLYLRRGAFQYYYENLSTIPDEV 463 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 + V + +G LDE V + + SW + +I + ++ R Sbjct: 464 SWRVF-----DAKSGHVIGRLDESFVMDLEEGMEFVMNGRSWIVLKIDDEARLLKVRESR 518 Query: 614 --SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEE 671 + +P W GE P + +G L F+ + E + ++ EE Sbjct: 519 SLESAIPSWEGEMIPVPFGVAFDVGRLRRELVFD--FNKALDLLEGVEFSEEELRRAFEE 576 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 R+ P R +V+E +++H+ +G R +E + + +G SV Sbjct: 577 IRD--EPFPTDRDIVVESTP-----KALVIHADFGSRANEAIGRIVHSLLILRYGRVFSV 629 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 + IV + P EP ++ IV A+ S + R A R + Sbjct: 630 RSQGHAIVFKTPFQLNPEEVKRYLYQEPGRVELIVSRALRDSHAYRWRMLNVAKRFGAL- 688 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGG 851 R +++ ++ + + + ETL E D D+ E +M L G Sbjct: 689 --------------RRDARIRKVERLFEGTVIERETLNELYHDKVDVKKAELVMELLKAG 734 Query: 852 EIQISDVTTTTPSPFATSLLFGYVAEFMYQS 882 +++ V PS A L EF+ Sbjct: 735 SLRVKTVLRKEPSTLAR-LNMTVSGEFLLSG 764 >UniRef50_D2RFY4 DEAD/DEAH box helicase domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFY4_ARCPR Length = 859 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 216/886 (24%), Positives = 360/886 (40%), Gaps = 155/886 (17%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 K+ +Q A+ + L+ APTGSGKT A + L+++ + K Sbjct: 10 GIKRLNDLQKVAIPRVAKGLNVLITAPTGSGKTECATIPILNKMLK---------MDCKG 60 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 LYI+P++AL D+ R L+I ++ + +R DT ER + Sbjct: 61 ITFLYITPLRALNRDMIRRLKIL------------ADKLGFTIAVRHSDTSNAERRLQSL 108 Query: 146 NPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 PP ILITTPE+ ++ L R RE+LR V+ V+IDE+H +A SKRG LA++LERL L Sbjct: 109 KPPQILITTPETFQILFLGRRLRESLRNVQFVVIDEIHELADSKRGVQLAIALERLREL- 167 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG 264 + Q IGLSAT+ +A ++A F G + VV + + R+V Sbjct: 168 -ANFQVIGLSATLSNAKEIAEFFGMED---VVEWNGKKVYEFRVV--------------- 208 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 E I V HRS+++FTN+R AE Sbjct: 209 --------------KGDEEEIARIVKNHRSSLIFTNTRQTAE------------------ 236 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 + ++ + HH S+S++ R E+ G+L +V TSS Sbjct: 237 ----------------TLGLKLKKMLKIEVHHSSLSRDVRIEAEKMFAEGKLDALVCTSS 280 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 +ELGID+G VD V+Q +P V +QR+GR+GH++ VSKG ++++S IV+ Sbjct: 281 MELGIDIGHVDAVVQYNSPREVKRLIQRVGRSGHRLEEVSKGYIVANEFDEILESWAIVK 340 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 G +E + P PLDVLA Q VA M+ + Y V+R + DL F+ Sbjct: 341 RAKKGLIERIEPFSKPLDVLANQIVAM-LMEGYDLGAIYEIVKRVKFYDDLSEEEFNEIC 399 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE 564 L + L+ N G +T + ++ IPD V+ + Sbjct: 400 AFLE-----------KNGLIRN---GKVT--RSGRRYFYSNISMIPDEKKVKVV-----D 438 Query: 565 KAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEG 624 A + +G LDE V N + + WRI I D V V +P W GE Sbjct: 439 TATHKVIGYLDESFVSLLDHN-VFAMKGELWRIVAID-DVVRVERVESE-GVVPSWLGEE 495 Query: 625 NGRPAELGEMIGDFLHLL-------ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG 677 P E+ + +G + + + + +E + + +IE Sbjct: 496 IPVPFEVAQDVGKIRRWICNLLRSFSKEEVVDILMQEFNTDEGSCKVVLDVIERCLKEGY 555 Query: 678 IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG 737 + + +E G +++++ +G +V+E A I+ + + Sbjct: 556 RIATDDVVTIE------GKGNVVINACFGHKVNETIAKLISLFL----PKPFEISVEPYR 605 Query: 738 IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGH 797 I + + D + + +K+ +++ A+ S + +F E A R + Sbjct: 606 IRIK-GNVDADYVKDVLMKIDVDKIAELIEIALIDSKVMQYKFVEVAKRFGCLDD----- 659 Query: 798 RTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 R+ +L+E +G PV +E L+E + D DL +++++ GEI+I Sbjct: 660 -----VGRINIRRLIEKMRG---KPVYIEALKEVIHDRLDLDRTAFVLKKIQSGEIEILV 711 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN 903 +P + L G D +A + + + Sbjct: 712 YEECSPLSKLSELRIG---------DIVGDREKAILKAFKERIENE 748 >UniRef50_Q6MCM6 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCM6_PARUW Length = 804 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 214/881 (24%), Positives = 370/881 (41%), Gaps = 90/881 (10%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 WF +P Q + W + L+ PTG+GKT AA+L AL +L + Sbjct: 6 HSLIEQWFNFKKWEPLPFQKEAWLKFLEGKSGLISVPTGAGKTYAAYLSALSKLHED--- 62 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 +K +ILYI+P++AL D++ L+ P+ + ++ RV RTGDT Sbjct: 63 ------PKKGIQILYITPLRALAKDLESALKAPIDDL----------KLIYRVERRTGDT 106 Query: 136 PAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 ++ K ++PP+ILITTPESL +ML A ++++I+DE H + SKRG Sbjct: 107 SYIKKEKQNKHPPEILITTPESLAVMLCNGHATSQFSYLQSIIVDEWHELLASKRGVLFE 166 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAF-LGGDRPVTVVNPPAMRHPQIRIVVPVA 253 L L RL A S Q GL+AT+ + A +G DR +VN R + V+P + Sbjct: 167 LCLSRLKA-WKPSVQIWGLTATIGNIQQAAQVCVGVDRSPIIVNAKMEREVILTAVLPES 225 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 G + + +L+ + ++ST++FTN+R E+ Sbjct: 226 L--------------DKLPWTGRLGLRLLPYVLNRLNFNQSTLIFTNTRSQTER------ 265 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 Y A L+ P + HH ++ K+ R E+ +K Sbjct: 266 -WYQAILEARPEWKN----------------------LIAIHHSAIDKKTREGIEEGIKF 302 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G +R VV TSSL+LGID+ V+ VIQ+ +P SVA LQR GR+ H+ P Sbjct: 303 GSIRFVVCTSSLDLGIDLPRVEKVIQIGSPKSVARLLQRAGRSSHRPLTPCYIEVVPTHA 362 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +L++ + +E+ P N DVL Q + A + Q DE +S+++ A ++ Sbjct: 363 LELIEIQAYRLAIKEHHIESRLPLKNCYDVLMQHMMTCAIGEGFQKDELFSQIKTTACFQ 422 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 DL + F+ L L S KLV++ + I+ G S GTI Sbjct: 423 DLSLKDFEDCLHFLISGGNSLKAYPEYKKLVYSNDKYIVE-DKGLIRRHKMSIGTISSDS 481 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 +V +G + +G ++E + + D G ++ Q V A + Sbjct: 482 QITVKWTKG------KAIGMIEESFLTNLKPGDHFLFGGKQLQLVQYRDMTAYVRLAKHK 535 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 WRG A LG + + S +L + +I+ Q+ Sbjct: 536 QKHAAVWRGSHLPFSASLGVELRKVCE--QKISLNSSDQEKFL--------LDQIIQLQQ 585 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 + +P ++ L++E + + G W + ++ G+ +H+ A+ +A R+ ++ Sbjct: 586 KFSY-LPTTKQLLIELTKSQEG-WHLFVYPFEGKIIHQGLALLVAHRLSKKASQTFTIST 643 Query: 734 SDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 +D G + + LF + + + ++E + + + FR+ A A L+ Sbjct: 644 NDYGFEL-LSRKSFQEEMLTTELFSTQYMNEDIQELINTQEIGKRYFRDIARIAGLIFPG 702 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGYP-DFPVILETLRECLQDVYDLPALERLMRRLNGGE 852 P Q ++ +S L ++ Q Y + ++ + +E L ++ L+ + RL+ + Sbjct: 703 YPHKHKTNRQVQISSSLLFDVLQKYDANNLLLQQAKKEVLDIQFEKIQLKNCLTRLSQAQ 762 Query: 853 IQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 + I SPF L V + + S L ER + Sbjct: 763 LMIK--KLKKFSPFGLELFVERVNDTL--STESLTERIKQI 799 >UniRef50_Q1QRK7 DEAD/DEAH box helicase-like n=6 Tax=Alphaproteobacteria RepID=Q1QRK7_NITHX Length = 853 Score = 568 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 240/905 (26%), Positives = 371/905 (40%), Gaps = 97/905 (10%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 +AD + LPD F WF P A Q A AL+IAPTG+GKTLA Sbjct: 3 IADREEEQPALPDDFL----RWFAARRWSPRAHQLALLQKARAGRSALLIAPTGAGKTLA 58 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 FL L L E + + LYISP+KAL D+ RNL+ P+ + Sbjct: 59 GFLPTLVELSCFPSPTGAEGSETRGLHTLYISPLKALAVDIARNLEAPIAEMT------- 111 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL-RGVETVIID 179 + ++V RTGDTP R + R PPDIL+TTPE + L+L S L ++ V++D Sbjct: 112 ---LPIKVETRTGDTPMLRRQRQRRYPPDILLTTPEQMALLLASDDAPFLFSSLQRVVLD 168 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 E+HA+ SKRG L+L+L +L L + IGLSATV +A FL +V+ Sbjct: 169 ELHALVTSKRGDLLSLALAQLWRLA-PRMRTIGLSATVAEPESLARFLVPQPEGKIVSAD 227 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 V + + G + I D + R+R+T+VF Sbjct: 228 I-----------VVAGGAAAPIVEMLDTRERLPWAGHSARHALGEIYDLIRRNRTTLVFV 276 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE L L + + D HHGS+ Sbjct: 277 NTRSQAEMLFQDLWRV------------------------------NDDGLAIALHHGSL 306 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 QR EQA+ G LR VV TSSL+LG+D G VDLVI + P + +QRIGRA H+ Sbjct: 307 DVAQRRKVEQAMTEGRLRGVVCTSSLDLGVDWGDVDLVINIGAPKGASRLMQRIGRANHR 366 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 + S+ + P R ++++ V ++ + + LDVLAQ + A Sbjct: 367 LDEASRAVLVPANRFEVLECRVAIDAVNENAQDTPPLRTGALDVLAQHVLGCACGAPFHA 426 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLS-GRYPS---GDFSAFRPKLVWNRETGILTAR 535 D+ Y VR AAP+ L R FD +D ++ G Y F+ R + E+ A Sbjct: 427 DQLYDEVRTAAPYAALTRADFDDVIDFVATGGYALKSYERFARIRQDKANSSESRWRVAN 486 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLL-------------PEGEEKAGSRRVGELDEEMVYES 582 P + + GTI + M V L G G R +GE++E + Sbjct: 487 PKVRQSYRLNVGTIVEEAMLKVKLVRSRHGGQNRGKGSTGTIARGGRMLGEIEEYFIEGL 546 Query: 583 RVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL 642 V D G R + + DQV V+ A S ++P + G L E + + L Sbjct: 547 VVGDTFVFGGEIVRYEVLVEDQVYVSRANDDSPKVPSYMGGKFPLSTYLAERVRNLLDDK 606 Query: 643 ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILH 702 + + WL+ ++ VP +R +V+E G ++ + Sbjct: 607 RAWSSLPDQVRQWLSL--------------QSHFSRVPHAREMVVETF-PRAGKHYLVCY 651 Query: 703 SPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI-VARIPDTDGKLPDAAI---FLFE 758 GR H+ + + R+ + VA++ + V + DT + + LF+ Sbjct: 652 PFEGRLAHQTLGMLLTRRLERMRVRPLGFVANEYALAVWMLGDTSSMIGQGRLNLDALFD 711 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 P+ L + + SAL FR CA + L+ R+ Q + ++ + + Sbjct: 712 PDMLGDDLEAWLAESALMKRTFRSCAIISGLIARRSTSDEKTRRQVLFSTDLVYDVLRKH 771 Query: 819 -PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAE 877 PD ++ + + D+ L ++ R+ G +I+ SP A ++ E Sbjct: 772 QPDHLLLRAARTDAAAGLLDIRRLSDMLARIRG---RITHKPLDRISPLAVPVMLEIGRE 828 Query: 878 FMYQS 882 +Y Sbjct: 829 AIYGE 833 >UniRef50_B6YWG2 Large helicase-related protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWG2_THEON Length = 925 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 227/908 (25%), Positives = 369/908 (40%), Gaps = 128/908 (14%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 + F + +Q + + + + L+IAPTGSGKT AA L + + EG Sbjct: 2 HLLLKKTIRERFGKLNELQMKAFREVSSGKSVLIIAPTGSGKTEAAVLPVFNAILEEG-- 59 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 K LYI+P+KAL D+ L+ + + V +R GDT Sbjct: 60 -------LKPISALYIAPLKALNRDLLERLEW------------WGKRLGISVEVRHGDT 100 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLA 194 A +++K T+NPP +LI TPE+L ++LT ++ R+ L V+ VI+DE+ + +KRGA L Sbjct: 101 SAYKKAKQTKNPPQMLIITPETLGVILTVKSLRKALENVKFVIVDEIAELVDNKRGAQLL 160 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L+LERL + +RIG++ATV + +V +LG + T+V P + + ++ P Sbjct: 161 LNLERLVEI--ADFKRIGMTATVGNEDEVREWLGAE---TIVKPSWRKAYRFHVLYPRPE 215 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 D + A R ++W +E H ++FTN+R AE L RL Sbjct: 216 EKDFKLAEELSLAPDVAARLRTLWEIVE--------EHGKALIFTNTRQFAEILAHRLKA 267 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 HHGS+SKE R E+ALK G Sbjct: 268 WGK---------------------------------PVEVHHGSLSKEARIKAERALKEG 294 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 +++ ++ TSS+ELGID+G VD+VIQ +P V +QR+GRA H++G VS+G Sbjct: 295 KIKALICTSSMELGIDIGDVDVVIQYMSPRQVNRLVQRVGRAKHRIGEVSEGYVITSNVE 354 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWK 493 D + S +I GR E + P LDVLA V + + Y RRA ++ Sbjct: 355 DYLQSLIIARRALEGRFEAVEPIGG-LDVLAHFLVGLLIEYKRMPRERPYEIARRAYVYR 413 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L + L +L G +++E +L R GA + TIPD Sbjct: 414 ELKWEEYLDVLGILEDARLIG----------YDKEKNLLYLRRGAFQYYYENLSTIPDEV 463 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI--VTPAP 611 + V + +G LDE V + + SW + +I + + V + Sbjct: 464 SWRVF-----DSGSGHIIGRLDESFVMDLEEGMEFVMNGRSWIVLKIDEEAKLLRVRESK 518 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEE 671 + +P W GE P + +G L F + + + ++ EE Sbjct: 519 SLESAIPSWEGEMIPVPFGIALDVGRLKRELTFD--FKRALELLEGVDFSEVELRRAFEE 576 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 ++ G R +V+E +++H+ +G R +E + + +G SV Sbjct: 577 IKD--GPFSTDRDIVIESTP-----KALVIHADFGNRANEALGRLVHSFLILRYGRVFSV 629 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 + IV + P EPE L IV ++ S + R A R + Sbjct: 630 RSQAHAIVFKTPFQLNPSEVKRYLYQEPEALEFIVARSLRDSHAYRWRMMNVAKRFGAL- 688 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGG 851 R +++ I + + + E L E D D+ E ++ L G Sbjct: 689 --------------RRDAKIRRIERLFEGTVIEREALNELYHDKVDVKRGELVLSMLKAG 734 Query: 852 EIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPG 911 +++ PS A L EF+ EL R+ + ++ Sbjct: 735 SLRVKTELRREPSRLAR-LNMSVGGEFLIGG----------------ELERDEILELFKR 777 Query: 912 ELLDPQVI 919 LLD +V+ Sbjct: 778 RLLDHEVV 785 >UniRef50_D2EE81 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE81_9EURY Length = 899 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 220/872 (25%), Positives = 373/872 (42%), Gaps = 125/872 (14%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F + T +Q ++ + APTG GKTLAAFL LD+L + Sbjct: 16 GFTELTEIQKAVIPKIKEGKNIIFRAPTGYGKTLAAFLPLLDKL----------KPDAEG 65 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 ++LYI+P+K+L D+ +N+ ++ + V IR GDT A ER+ Sbjct: 66 IQLLYITPLKSLNRDIFKNIINI------------SNKMGIEVDIRHGDTTAYERANQAT 113 Query: 146 NPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 PP LITTPE++ +L S R E L+ ++ VI+DE+ ++ SKRG ++ LERL + Sbjct: 114 MPPHCLITTPETVQSILLSKRLVEKLKNLKYVIVDEIQSLMESKRGTQFSVGLERLRRI- 172 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG 264 + Q +G+SAT+ + +L + V + I + P N +D + Sbjct: 173 -ANFQIVGISATISDFKETKEYLSAEESVEF---SGDKEYDIEVTYPSFNNEDEEVASKE 228 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 A I +E+ + +STI+FTN+R AE L +RL++ + Sbjct: 229 NVSKLVANSLRYIS--------EEIKKSKSTIIFTNTRETAELLGSRLSKFLKDKK---- 276 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 HH S+SKE R E A K G++ ++ATSS Sbjct: 277 ---------------------------MEVHHSSLSKEVRMEIENAFKIGDIDLMIATSS 309 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 LELGID+G VDLVIQ +P V +QR+GR+ H G++KG D ++S I Sbjct: 310 LELGIDIGNVDLVIQYMSPRQVIKLIQRVGRSNHNQLGIAKGKLVTINIDDYLESKAIDN 369 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 C +LE ++ P LD+LA Q V + +E + V+++ +KDL + FD + Sbjct: 370 CRLKRKLEVISLPVESLDILAHQIVGLIIDGVQKNEEIFKVVKKSYAYKDLKKEKFDQVI 429 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE 564 D L Y ++ ++ R G L + + +IP++ Y V+ + Sbjct: 430 DFLIKHY-----------MIRYYGDTLIRTRKGL-LFYINNISSIPNKKSYVVI-----D 472 Query: 565 KAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE 623 ++R+G LDEE V E ++ + + +W+I +I ++ VT +P W GE Sbjct: 473 SLLNKRIGVLDEEFVAENAKPGNNFIMRGENWKIIKIENQKIEVTRTNSNIGAIPAWEGE 532 Query: 624 GNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSR 683 + E D + +++EQ+ ++P S+ Sbjct: 533 LMPVYRFVAEEAADLREKYSSK--------------------FSVLKEQKE-NFVIPNSK 571 Query: 684 HLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIP 743 +V+E+ D +++HS +G +E A A+ +I + G I + Sbjct: 572 RIVVEKVDD-----YVVIHSTFGSMTNEAIAKALTSKITEIIGESVISKIDPYRITIKTH 626 Query: 744 DTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQ 803 K+ D I L + L + ++E + ++L+ RF A R ++ + Sbjct: 627 LPAEKIKDLIINLND---LEKRIKENIKRTSLYEYRFLNIAKRFGVINKYADFTKI---- 679 Query: 804 QRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTP 863 +L + + Y + + ET +E D+ + E +++++N GEI I V Sbjct: 680 ------RLRSLIELYDNSILEEETFKEIFSSKVDIKSAEDILKKINSGEISIV-VNDGEA 732 Query: 864 SPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 SP A L + + + R VL Sbjct: 733 SPLAYESLETSYGGSIIKPNEAKKALRQLVLE 764 >UniRef50_Q1YKM0 ATP-dependent helicase n=2 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YKM0_MOBAS Length = 862 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 232/903 (25%), Positives = 363/903 (40%), Gaps = 82/903 (9%) Query: 1 MADNPDP--SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 M PDP P +WF R P Q A AL+IAPTG+GKT Sbjct: 1 MTVRPDPFLPGSAPFPLPAPFLEWFARNGWSPRPHQLDLLARAESGASALLIAPTGAGKT 60 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 LA FL +L L R G + + LYISP+KAL TD+ RNL+ P+ I Sbjct: 61 LAGFLPSLVDLHRRGRP--KPGTRPYGIHTLYISPLKALATDIARNLEKPVAEIG----- 113 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVI 177 + + + RTGDT R + PPDIL+TTPE L L++ + AR + VI Sbjct: 114 -----LKVTLETRTGDTSQVRRQRQKLKPPDILLTTPEQLALLIAGKDARGFFSDLRYVI 168 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 DE+H++ SKRG L+L L RL +L Q IGLSATV D+ +L P V Sbjct: 169 FDELHSLVTSKRGHLLSLGLARL-RMLRPDIQTIGLSATVSEPDDLRRWLVSQAPGGDVA 227 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDS---------HAGREGSIWPYIETGILDE 288 A + V P A+ + G +G Y I + Sbjct: 228 EIADADGVLPDVAPDADPRLSELITVAGGAKPEITILKSSERVPWQGHTSRYAMPEIYEA 287 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSD 348 + H++T++F N+R AE L L + + + Sbjct: 288 IQAHKTTLLFVNTRFQAEMLFQELWRI------------------------------NDE 317 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVAS 408 HHGS+ QR E A+ + +LR VVATS+L+LGID G VDLV+ V P + Sbjct: 318 TLPIALHHGSLDVGQRRKVEAAMAANQLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASR 377 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 QRIGR+ H++ SK + P R ++++ ++ + G + LDVLAQ Sbjct: 378 LAQRIGRSNHRMDEPSKAILVPANRFEVLECQAALDANYLGAQDTPAMRDGALDVLAQHV 437 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 + A + + D+ Y+ V AAP+ L R FD +D ++ + K+V + Sbjct: 438 LGMAVAEPFRADDLYAEVTTAAPYASLDRETFDRVIDFVATGGYALRVYERYAKIVLTED 497 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA----GSRRVGELDEEMVYESRV 584 + P + GTI D V L K+ G +G+++E V Sbjct: 498 GTWRVSHPRIAQQYRMNAGTILDAPSLQVRLIRRRTKSAIARGGPILGKIEEGFVEALAP 557 Query: 585 NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD 644 D + R + I +Q +VT A +++P + G L + L A Sbjct: 558 GDTFSFSGQVLRFETIHENQCLVTKAVSEDSKIPTYAGGKFPLTIFLAAQVRAMLADPAR 617 Query: 645 GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSP 704 + WLA + ++PG L++E + + ++ + Sbjct: 618 WGELPEQVSDWLAI--------------QQRKSLIPGPDELLIETFPNGK-RFFLVAYPF 662 Query: 705 YGRRVHEPWAVAIAGRIHALWGADASVVASDDGI-VARIPDTDGKLPDAAI---FLFEPE 760 GR H+ + + R+ VA+D I + D + D + LF+ + Sbjct: 663 EGRLAHQTLGMLLTRRLERARAKPLGFVATDYAISIWGRGDMGAMIADGRLSLDALFDED 722 Query: 761 KLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-P 819 L + + S L FR+CA + L+ R PG Q + A + ++ + + P Sbjct: 723 MLGDDLEAWMADSWLLKRTFRQCAVISGLIEKRHPGQEKTGRQVTVSADLVYDVLRAHEP 782 Query: 820 DFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFM 879 D ++ T + + D+ + L+ R+ I SP A ++ E + Sbjct: 783 DHILMRATWADAATGLLDVSRVSDLLGRIKH---HIVHKDLDRVSPLAVPIMLQIGRESV 839 Query: 880 YQS 882 Sbjct: 840 MGE 842 >UniRef50_C7DIA3 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA3_9EURY Length = 920 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 205/857 (23%), Positives = 355/857 (41%), Gaps = 101/857 (11%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 + D FL+ + T +Q V + L+IAPTGSGKT AA L LD + Sbjct: 3 SVYDIFLKKYGSYTQIQKDAIPVIRSGNNCLLIAPTGSGKTEAAVLPVLDSII------- 55 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 E+ ++ LYI+P++AL D+ + L + V + + +R GDT Sbjct: 56 -ESREKIGIVALYITPLRALNRDMIKRLSEIC------------SRVGITISVRHGDTLR 102 Query: 138 QERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALS 196 ++RS + PP ILITTPE+L +L T + L+ V+ VIIDE+H + +KRGA L++ Sbjct: 103 KDRSVQEKAPPQILITTPETLQSILPTKKLGAALKNVKFVIIDEIHELYYNKRGAQLSVG 162 Query: 197 LERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMD 256 LERL + QRIG+SATV ++ V+ FLGG R +V A + + + +P Sbjct: 163 LERLKDMAG-DFQRIGISATVGNSDVVSKFLGGGRKCEIVAIDARKQMHLEVYLPEKQKV 221 Query: 257 DVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 + + G D A I V + +ST++F N+R + E L +RL L Sbjct: 222 KLKDIEEKFGLDEEAMAR-------LETIAALVKKSKSTLIFANTRQIVEALGSRLVYLN 274 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 + D HH S+ K++R E KSG++ Sbjct: 275 SV----------------------------YDFGGISVHHSSLDKDERIRVENDFKSGKV 306 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 + ++ATSSLELGID+G +DLV+Q +P +QR+GR+GH G VS G D Sbjct: 307 KSIIATSSLELGIDVGKIDLVVQYGSPRQALRLVQRVGRSGHSTGRVSNGAIIATNNADA 366 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRRAAPWKDL 495 +++ I + + +G++E +N LDVL Q A +++ Y V RA P+++L Sbjct: 367 LEALSICDNVNSGKIEEFGVENNALDVLVNQLAGIALEKGECRIEAAYETVVRAYPYRNL 426 Query: 496 PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMY 555 F ++ +S + + G++ G ++ +PD + Sbjct: 427 KMETFIEAVEFMSKNH------------LLRYSEGVMRGTGGTRIYYYKHLSVLPDSKRF 474 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 V + +R + LDE V + W++ I + + P+ Sbjct: 475 VV-----KSVVNNRILSTLDENFVINNIDEGSVFITKGLPWKVISIDEGTITIEPSTDLE 529 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 A +P W GE ++ + F+ L + F + + ++ + E + Sbjct: 530 AAVPDWVGEDIPVSKQVADA---FMRNLEN---FRQAENKGFMDPAAFSMLKDFVSEVSS 583 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 I G + +E D + ++ G +E + + I G ++ +S Sbjct: 584 IYEIKSGE--INIEEYDD-----YKVAYTFLGTLANEALSRLLGYLIGTEVGDSVNIKSS 636 Query: 735 DDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRT 794 + + + + + ++ EA+ + LF +F A ++ Sbjct: 637 PY--MIFFEARKNFDLEKVLRSISSQNVYGLLAEAIRDTDLFRYKFIGIAKLFGIVEK-D 693 Query: 795 PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 L +Q +R + + V ET RE L + D+ L ++ G ++ Sbjct: 694 ASVSKSLARQLMRI---------FRNTLVYRETEREILDNYLDVGGLINFFEQIESGALK 744 Query: 855 ISDVTTTTPSPFATSLL 871 I + S ++L Sbjct: 745 IKRIRLQKLSRLTNAIL 761 >UniRef50_B9LRP7 DEAD/DEAH box helicase domain protein n=7 Tax=Halobacteriaceae RepID=B9LRP7_HALLT Length = 972 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 242/868 (27%), Positives = 358/868 (41%), Gaps = 97/868 (11%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 + F PT Q + A ++ALV+APTG+GKT A L D + D R Sbjct: 23 EQGFSTPTEPQREAIPPLADGKNALVLAPTGTGKTETAMLPVFDAIV--DARDAPGDQPR 80 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 LYI+P++AL D+ L+ + + V +R GDT ERSK Sbjct: 81 SGISALYITPLRALNRDMMDRLEW------------WGDRLGVEVAVRHGDTTRYERSKQ 128 Query: 144 TRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 +PPD+LITTPESL +LT S+ R L V V+IDEVH +A +KRGA L + LERL Sbjct: 129 ADDPPDVLITTPESLQAILTGSKMRVALEDVAHVVIDEVHELASAKRGAQLTVGLERLRR 188 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGG----------DRPVTVVNPPAMRHPQIRIVVPV 252 + QRIGLSATV + +V FL G DR +V A +R++ P Sbjct: 189 VAGP-FQRIGLSATVGTPEEVGKFLVGSGKRDPDHPGDREFEIVEVAAGTRTDVRVLDPP 247 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 D + +++ A + I + V H ST++F N+R AE L +R Sbjct: 248 ITDRDTTLAGELAVDETTASHVRT--------IREIVADHESTLIFVNTRQTAEALGSRF 299 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 L A R +++ SI D HHGS+SK+ R E K Sbjct: 300 KTL-AEREEKAGSID--------------------DPTEIEVHHGSLSKDVRIDVEDRFK 338 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 SGEL +V TSS+ELGID+G VD V+Q +P VA LQR+GRAGH+ VS+G + Sbjct: 339 SGELDGLVCTSSMELGIDVGRVDHVVQYGSPREVARLLQRVGRAGHRRDLVSEGTVVTQG 398 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRRAAP 491 D +++ I A +E H LD +A Q V + + E Y V A P Sbjct: 399 GDDTLEALAIARRAGAELVEPAAIHHGSLDTVANQIVGVVMDEGDVHAREAYQIVTSAYP 458 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++DL F + L G + L + + L G + IPD Sbjct: 459 FRDLAEETFQEIVRELDGNHL----------LWLDEASDTLEKSGGTWQYFYANLSMIPD 508 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESR-VNDIITLGATSWRIQQIT--RDQVIVT 608 Y V + + R +G LDE V + WRI ++ ++V VT Sbjct: 509 ESTYEVY-----DMSSRRGIGTLDERFVVNFAGPGETFIQRGEMWRITEVDEEEERVNVT 563 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------GAFFSGTIPPWLAEEN 660 P + +P W G P + E +G A+ A + A+E Sbjct: 564 PIADPAGEVPSWIGREIPVPKPVAEEVGRIRGEAAEALAAGSTPEAVAGDLAERYPADER 623 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 TIA + + +A VP R +V+E + +++ +G V+E A +A Sbjct: 624 TIATALKPVVDHVDADHPVPTDRRIVIEG-----SARTVAVNAAFGHEVNETLARLLAAL 678 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + G+ + I +P G + +P++L + A+ +S Sbjct: 679 VGQRAGSSIGMDVDPYRIEFEVPHGVGPGTFREVLETTDPDRLEAYLELALKNSDALKFT 738 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 + AA+ + G R +LL +G PV E LRE + Sbjct: 739 LAQVAAKFGSIKRYREGR------GRFGGDRLLAALEG---TPVYDEALREVFHADLAVG 789 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFA 867 L+ + G I ++ TP A Sbjct: 790 ETAELLEDVQDGSIDLAIARERTPLGIA 817 >UniRef50_A2BMA9 DEAD/DEAH box helicase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMA9_HYPBU Length = 955 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 220/867 (25%), Positives = 361/867 (41%), Gaps = 98/867 (11%) Query: 14 VFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P R R + +PT +Q + + R H L++APTGSGKT AA L A+ + Sbjct: 16 LLHPVLRAVLPRYGYIRPTEIQEKAIPLILRGNHVLIVAPTGSGKTEAALLPAMSSILPM 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++YI+P+++L D+ ++ + V LR+ +R Sbjct: 76 RGFTGK-------IYVVYITPLRSLNRDIFARMKSL------------ASSVGLRLEVRH 116 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GD+ E+ + NPP I+ITTPES Y +L+ + RE + ++ VI+DEVH + G KRGA Sbjct: 117 GDSTELEKRRFLENPPHIMITTPESFYFLLSVEKFREAISELKYVIVDEVHELVGDKRGA 176 Query: 192 HLALSLERLDAL-LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 L+L+LER +L + Q +GLSATV V L G R V +V R + +V+ Sbjct: 177 ELSLALERAISLYVKGKVQLVGLSATVAEPELVVRKLFGSRYVRIVEASMARKYNVGVVL 236 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + S E+ + I I + + S IVFTN+R AE + A Sbjct: 237 PSRDNTVNGLELSEFNEELYEDTIDRI-----AYIANVIREKGSVIVFTNTRDTAELIGA 291 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L ++ HHGS+S+E R E+ Sbjct: 292 LLKKVLGENS-------------------------------IEVHHGSLSREHRLSIEER 320 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 + GE+ +VATSSLELGID+G V V+Q +P V +QR+GRA H+ G + G+ Sbjct: 321 FRKGEIAALVATSSLELGIDIGHVGYVVQYLSPRQVVKLVQRVGRARHRAGEAAAGVVVA 380 Query: 431 -RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRR 488 R D+++SAVI G LE L PPH PLD L Q + + + + Y V R Sbjct: 381 SRNLFDVLESAVIAARTSRGNLEKLKPPHAPLDALVHQVAGTVIENPGIDIGKLYLLVTR 440 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + ++ L F A L + ++ R+ + R + + Sbjct: 441 SGFYEGLDFDEFMAVLSYME-----------HAGIIRIRDGKLYPGRK--CMSYYFNSTM 487 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 I + Y V + +R+G LDEE V V + L W + + V V Sbjct: 488 ITESIQYPVY-----DVVSGKRIGLLDEEFVASLDVGEKFVLAGRVWEVVGFDENGVRVK 542 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGL 668 P+ P W G+ + + L +G + + + + + Sbjct: 543 PSSEDRLIPPAWEGDLIPVEHNVAREVASILRRFGEGH--TEVLDMYPLSDTARRYVGEK 600 Query: 669 IEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 + + G +P R +++E D +++ G R ++ +A I + G + Sbjct: 601 LLQAMRELGFLPHDRRILVEHYGDT-----YVVYVFLGSRGNKSLEYLLAYYISQIKGYN 655 Query: 729 ASVVASDDGIVARIPDTDGK----LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 ++ IV ++P+ + + P L ++ EAV S L++ A Sbjct: 656 VLSASTPYAIVLKLPERSEPGLVEMVIKRLAELPPSTLEEMYVEAVKKSRLYSWILYRVA 715 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 RA +P R P +R + + + +E LRE +L ++ L Sbjct: 716 QRAGALPASRRA-RDPSMLKR--------VVAQLANTILGVEALREFENRKGNLEVVKAL 766 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLL 871 +R + G + IS V+ PSP ++ Sbjct: 767 LRDVGKGYVLISTVSRRNPSPLTEDII 793 >UniRef50_Q3IP60 Lhr-like helicase n=5 Tax=Halobacteriaceae RepID=Q3IP60_NATPD Length = 949 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 244/1006 (24%), Positives = 389/1006 (38%), Gaps = 128/1006 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 R F PTA Q + A E LV+APTGSGKT A L L + +E R Sbjct: 28 ERGFSTPTAPQRKAIPTLAAGESGLVVAPTGSGKTETAMLPVLSSI--------QERPPR 79 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 + LYI+P++AL D++ L+ + + + +R GDT +R K Sbjct: 80 HGIQALYITPLRALNRDMRERLEW------------WGETLGIDIDVRHGDTTDYQRQKQ 127 Query: 144 TRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 +PPD+L+TTPE+L M T + R + +E +++DEVH +AGSKRGA L + LE L Sbjct: 128 AEDPPDVLVTTPETLQAMFTGEKLRRAIEDIEHIVVDEVHELAGSKRGAQLTVGLEHLRE 187 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 QRIGLSATV ++V FL GDR V + A + + + P +D ++ Sbjct: 188 HAGP-FQRIGLSATVGDPTEVGRFLTGDRGCHVTDVEAGTNLDVTVRTPEIRPEDRTAAG 246 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 + A I + V H S ++F N+R AE L +RL Sbjct: 247 ELLTDAEVASHVRVID--------ELVDAHDSVLIFVNTRQTAEGLGSRLKAYGTN---- 294 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 HHGS+SK R E A K+GE+ ++ T Sbjct: 295 -----------------------------IGIHHGSLSKSARIDVEDAFKTGEIDGLMCT 325 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 SS+ELGID+G +D VIQ A+P V LQR+GRAGH+ S G D ++ I Sbjct: 326 SSMELGIDVGDIDHVIQYASPREVRRLLQRVGRAGHRRDETSSGTVITTHPDDTFEALSI 385 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFD 501 V+ G +E+ H LD +A Q + L Y + RA P+++LP F Sbjct: 386 VDRAERGAVESAGIHHGSLDTVANQIAGLLMGFEELPAARAYEILTRAYPFRNLPEEQFK 445 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 A + LS L + G + IPD Y+V Sbjct: 446 AVVRELSENR----------ILWLEEGDDRIEKSGGTWQYFYANLSMIPDEANYTV---- 491 Query: 562 GEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWR--IQQITRDQVIVTPAPGRSARLP 618 + A VG L E V + + G WR ++V+V+P + +P Sbjct: 492 -TDMASGDPVGTLAERFVVTFAEPGETFVQGGEMWRITEIDDEEEEVLVSPIEDPTGEVP 550 Query: 619 FWRGEGNGRPAELGEMIGDFLHLL--------ADGAFFSGTIPPWLAEENTIANIQGLIE 670 W G+ P + E + GA + +E+T + +E Sbjct: 551 SWVGQEIPVPRGVAEAVATARADARGRFDGGDGRGAVARSVADRYPTDEHTASEALKPVE 610 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 + G +P +V+E +I+L++ +G +E ++ I G + Sbjct: 611 AHK---GPIPTPDRIVVEGF-----GRQIVLNAAFGHTANETLGRLLSALIGQQTGGSVA 662 Query: 731 VVASDDGIVARIPD-TDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 + I +P T + +P+ + +V ++ ++ + AA+ Sbjct: 663 MEVDPYRIELEVPSGTSIGDVVELLETTDPDHVPTLVELSLKNAETLKFTLAQVAAKFGA 722 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + T Q R +LL D P+ E +R L + D+ ++ RL Sbjct: 723 LKRWKG---TGSSQNRFGKDRLLAAL---EDTPIYDEAVRVVLHEQLDVDGASDILSRLQ 776 Query: 850 GGEIQISDVTTTTP-------------SPF-ATSLLFGYVAEFMYQSDAPLA-------E 888 G+I+++ V T SP A + + V E + D LA + Sbjct: 777 SGDIELATVGERTALGQAGRSSGRELLSPENADASVVETVKERILDDDVLLACLHCKEWD 836 Query: 889 RRASVLSLDSELLRNLLGQVDPGELLD--PQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 RR +V +D + L G L +V+ V + + + + +++ Sbjct: 837 RRQTVKRVDDQPECPLCGSTRIAALNPWADEVLEAVRTDDKDDDQQKATERAYKAASIVQ 896 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLA 992 G V LA R G + + +I + + A Sbjct: 897 SHGKRAVIALAARGVGPRNAAYIINNHREEEADFYRDIIERERQYA 942 >UniRef50_A3CUY2 DEAD/DEAH box helicase domain protein n=5 Tax=Methanomicrobiales RepID=A3CUY2_METMJ Length = 909 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 241/955 (25%), Positives = 385/955 (40%), Gaps = 146/955 (15%) Query: 2 ADNPDPSSL---LPDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGK 57 P P S PD+ P ++ R F +A Q Q E+ +++APTG+GK Sbjct: 4 TSAPRPRSAPQTTPDLLDPRVQEVVRKRGFTGFSAAQEQAIPRLLAGENLVLVAPTGTGK 63 Query: 58 TLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T +A L DRL + G + LYI+P+++L D+ ++ + Sbjct: 64 TESAMLPVFDRLLKTTGS---------GFKALYITPLRSLNRDILNRMEWWCR------- 107 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETV 176 E+ L VG+R GDTP ER K NPPD+LITTPESL + + R RE L+ V+ V Sbjct: 108 -----ELGLSVGVRHGDTPQNERRKQALNPPDLLITTPESLQALFMGKRLREHLKNVKYV 162 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 ++DE+H +A SKRGA LA++LERL A QRIGLSATV + D+ FL G RP ++V Sbjct: 163 VVDEIHELADSKRGAQLAVALERLAAYAG-EFQRIGLSATVGNPDDIGRFLAGHRPFSLV 221 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 P I ++ + + + ST+ Sbjct: 222 EVPVASSLDIGVLFAGEDFGAQARAVGKCLDSP-----------------------GSTL 258 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 VF N+R AE L RL HH Sbjct: 259 VFVNTRVTAEALGHRL----------------------------------YSRGDVEVHH 284 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRA 416 GS+S++ R E+ + GE+R ++ATSS+ELGID+G ++ V+Q +P V+ +QR+GRA Sbjct: 285 GSLSRDVRVDAEERFRKGEVRTLIATSSMELGIDIGHIEHVVQFGSPRQVSRLVQRVGRA 344 Query: 417 GHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-D 475 GH++ +S+G DL++S VI A E + PP DVLA Q A A Sbjct: 345 GHRLDAISRGTVLATGFDDLLESLVIARRAKANECERIVPPAGAADVLANQVAAIAVEYG 404 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 ++V + R+ VFD +L D + R G R Sbjct: 405 EIEVSRVREMIERS--------NVFDGCGPLL------DDVCRQMAEHRLIRLDGTRIIR 450 Query: 536 PG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGAT 593 G A+ + + I D + + R VG LDE V + Sbjct: 451 TGRARRYLIENLSMIHDEKKMEIF-----DMVSRRTVGTLDESFVLGWMHTGAVFITKGQ 505 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP 653 WR+ +I ++ V PA +P W GE P + +G A G Sbjct: 506 LWRVLEIEGTRITVEPATRAKGEVPSWEGEQIPVPFAVAREVGALRRTRAFG-------- 557 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + IA + + VP R + LE D ++ + G + +E Sbjct: 558 RYSDTPAAIAYAERFMGRMDEGNYPVPTDRLVTLEN-----ADEGVVCNVCGGHKANEAL 612 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIVREAVGS 772 A A++ + A +G + + R+PD L + EP+ L I++ A+ Sbjct: 613 ARALSVLLSARYGTSVGIEVGAYRFLLRLPDNVRALEVQETLAALEPDHLPGILKLALKR 672 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 +ALF + + A + + +R +L+++ + + E RE Sbjct: 673 TALFKWKLVQVAKKFGAIDADAD-------YERFSIHRLIDL---FDGTVIAAEAYRELF 722 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 D+ A + ++ ++ G I ++ T SP + +L P +A Sbjct: 723 SISMDMDAAQEILAAVHDGRIAVA---TGRLSPLGSDVLSSSRDMI-----PPPMVDQAV 774 Query: 893 VLSLDSELLRN--LLGQVDPGELLDPQVIRQVEEELQ------RLAPGRRAKGEE 939 + +L L + +L ++ + V+ +V ++ Q RL + E+ Sbjct: 775 IGTLARRLEKEDVVLFCMNCRKWKSRTVVERVPDKPQCPLCSARLIAALKPWDED 829 >UniRef50_A9A127 DEAD/DEAH box helicase domain protein n=2 Tax=Thaumarchaeota RepID=A9A127_NITMS Length = 913 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 212/870 (24%), Positives = 359/870 (41%), Gaps = 125/870 (14%) Query: 9 SLLPDVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 +L +P F F T +Q + + + + LVIAPTGSGKT + + Sbjct: 4 PVLTKQMNPIPESLFENFGFSNLTEIQKKASPIILQKKDCLVIAPTGSGKTECSVIPIFS 63 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 L + K + LYI+P++AL DV R + + L Sbjct: 64 LL--------KNTKKPGKIKTLYITPLRALNRDVFRRITKY------------AHQSELS 103 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAG 186 + IR GDT ++R K+T NPPD+LITTPE+L ++LT + + +E +++DEVH + Sbjct: 104 IEIRHGDTTQKDRKKITENPPDVLITTPETLVILLTQVKYLDAFSELEWIVVDEVHELLS 163 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQ 245 S+RG L+LS+ERL+ +IGLSATV + + F+ G R ++ ++R Sbjct: 164 SERGTQLSLSVERLEFNSELPLTKIGLSATVGNFEEAGKFVVGTKRKCEIIRDTSVRKYD 223 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + + + DV+ I ++ LD ++FTN+RG + Sbjct: 224 VEVKYVDGTISDVAE---------------KIIEHVSNLNLDS-----PVLLFTNTRGES 263 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E L + L E + HHGS+SKE R Sbjct: 264 EFLASILKE--------------------------------KSIIPIELHHGSLSKEVRE 291 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 TEQ L+ G+ VV TSSLELG+D+G+V+LVI +P V+ +QRIGR+ H +K Sbjct: 292 ETEQNLREGKRGIVVCTSSLELGLDIGSVELVIHYGSPRQVSKLVQRIGRSRHNRNASAK 351 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYS 484 GL D ++ I++ + G +E LDVLA V + +D+ + Sbjct: 352 GLIITNNSDDEFEAQAILQRIQEGSIEEQKIHDGSLDVLAHHLVGLTMQIGEISIDKAFD 411 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 +++A P+++L LD+L Y + ++R + + Sbjct: 412 LIKKAYPFRNLKLEELVDVLDLLDSNYL----------IFFDRTKMTFWKKGRSFKYYFE 461 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQITRD 603 + TIPD + V + G + +G LD+ V + +I L + WRI + Sbjct: 462 NLSTIPDILKFKVF-----DSVGKKIIGTLDQRFVGDYGDSGNIFVLKGSQWRILNVDEK 516 Query: 604 --QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT 661 V V P G +P+W GE + +G+F + +G+ Sbjct: 517 SFTVNVEPFRGGGITVPYWEGENIPIDYKTARKVGNFRSKVRNGSL-------------- 562 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + EQ N + ++V+E R + I++HS +G +++ + ++ + Sbjct: 563 --QLTNKTIEQLNFNE-ISEENNVVVESNRSQ---GSIVIHSCFGTKINSTLSTLLSSML 616 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 ++ G+ + IV + L + L +V ++ + R Sbjct: 617 SSMLGSVVDSRSDGYRIVLS-SRSRISEKLFLEILKDDYDLFSMVTASLAGTHNVNWR-T 674 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPAL 841 C A+ + GR + R A L E Y ++ E LRE D YDL Sbjct: 675 WCVAKKFGIVGRGAVYE------RKSARFLYE---RYAKTALVQEALRELFHDKYDLKNT 725 Query: 842 ERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 ++L++ + +I + + S A +L Sbjct: 726 DKLLKEIRDDQIHVKWLEVDQFSKLAEPIL 755 >UniRef50_Q0C4L0 ATP-dependent helicase, DEAD/DEAH family n=6 Tax=Alphaproteobacteria RepID=Q0C4L0_HYPNA Length = 875 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 235/949 (24%), Positives = 380/949 (40%), Gaps = 117/949 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 M D P LP PA WF R P Q + AL+IAPTG GKTLA Sbjct: 1 MPDTAPPPFQLP----PAFAAWFARRGWSPRPHQLALAETSLSGGSALLIAPTGGGKTLA 56 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 FL +L L ++ ++ + LYISP+KAL DVQRN+ P+ +A Sbjct: 57 GFLGSLIELAQKPRSNSHI----PSLHTLYISPLKALAADVQRNVMTPVTEMA------- 105 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 + +R+ RTGDT R + + PPDIL+TTPE L L++ S A ++ VIID Sbjct: 106 ---LPIRIETRTGDTATHVRQRQRKTPPDILLTTPEQLALLIASDNAANFFADLKCVIID 162 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR-------- 231 E+HA+A SKRG L+L L L A + + +GLSATVR +A +L Sbjct: 163 EIHAIAPSKRGDLLSLGLATL-AEWSPTCRFLGLSATVRDPEQLAGWLDVRSAPSTPLPS 221 Query: 232 --------------PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE----DSHAGR 273 PV + + + R +P ++ + + + Sbjct: 222 GRGAGVRGQPSSASPVATSHAQPLLPERARGPIPSVHIIQTPTTINPDIDILVSRQRIPW 281 Query: 274 EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF 333 G + + + + + T+VF N+R AE L L Sbjct: 282 SGHSGRFAVPEVYEAIRDAKMTLVFVNTRSQAELLFQEL--------------------- 320 Query: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 + D HHGS++++QR E A+ +G L+ VV TS+L+LGID G Sbjct: 321 ---------WAANEDNLPIALHHGSLARDQRERVEAAMAAGLLKAVVCTSTLDLGIDWGE 371 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN 453 VDLVIQ+ P A +QRIGR+ H++ SK L P R ++++ + AG ++ Sbjct: 372 VDLVIQMGAPKGAARLIQRIGRSNHRMDEASKALLVPTNRFEVLECRAAQAAVEAGEIDG 431 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS-GRYP 512 P LD+LAQ + A + + Y +RRA P+ L ++ +D ++ G Y Sbjct: 432 DGPRAGALDILAQHIMGRACGEGFHLPALYDEIRRAQPYAALDWETYERLVDFVATGGYA 491 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAG----- 567 + F ++V + + P + + G I + M SV L A Sbjct: 492 LKTYDRF-HRIVRRADGLWVARTPRDKQAHRMNVGAIVEAPMLSVRLASFAGGASPNSGG 550 Query: 568 ---------SRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 R++GE++E + D R+ I +VT A S +P Sbjct: 551 GEQRRAIRAGRKLGEMEEYFLSLLTPGDTFLFAGEILRLLTIDGMDALVTRAQSDSPAIP 610 Query: 619 FWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGI 678 + G L + + +H + + W E + Sbjct: 611 TYNGGKFPLSTFLADRVRHMIHNPEEWKHLPDPVREWF--------------EIQELRSA 656 Query: 679 VPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI 738 +P HL++E ++ + GR H+ + + R+ VAS+ + Sbjct: 657 IPPPDHLLVETF-PRADRHYLVSYPFEGRLAHQTLGMLVTRRLERAGAKPVGFVASEYAM 715 Query: 739 VARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR 798 + L A I F PE L + E + SAL F CA + L+ PG Sbjct: 716 AVWGMEDMRGLDMAEI--FHPEMLGDDLEEWLDESALMKRTFAHCALISGLIHRNMPGTE 773 Query: 799 TPLWQQRLRASQLLEIAQGYPDFPVILETLR-ECLQDVYDLPALERLMRRLNGGEIQISD 857 Q + ++ + + ++L+ R + + D+ L ++ R++G I Sbjct: 774 KNSRQVTFSTDLIFDVLRSHEPGHILLQATRADAATGLLDVRRLSDMLARIHG---HIVH 830 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLG 906 SPFA ++ E ++ + A A R + + +L+R+ +G Sbjct: 831 KPLAKISPFAVPVMLEVGREPVFGASAMEAILREA----EEDLVRDAMG 875 >UniRef50_Q3AJL5 DEAD/DEAH box helicase-like n=17 Tax=Cyanobacteria RepID=Q3AJL5_SYNSC Length = 831 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 224/890 (25%), Positives = 370/890 (41%), Gaps = 90/890 (10%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 WF + P Q +TW+ + L+ PTGSGKT AA + + R+ E Sbjct: 23 PIHAWFAQRNWTPLPFQQETWNAYLAGRNGLIQVPTGSGKTFAAVMGPMARMLAE----- 77 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 K R++YI+P++AL D+ ++ P++ + +RVGIR GD+ + Sbjct: 78 --EQPLKGIRLVYITPLRALSRDLSLAIREPIEAMGW----------PIRVGIRNGDSSS 125 Query: 138 QERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALS 196 ER+K + PP IL+TTPESL L+L++ +A E +ETVI+DE H + GSKRG+ L Sbjct: 126 SERTKQLKAPPQILVTTPESLALLLSNAKAEELFGQLETVILDEWHELMGSKRGSQTELC 185 Query: 197 LERLDALLHTSAQRIGLSATVRSASDVAAF-LGGDRPVTVVNPPAMRHPQIRIVVPVANM 255 L L L Q +SAT+ + A LG ++ R +IR ++P Sbjct: 186 LSWLRQL-RPQLQTWAISATIGNIEQAARHALGTAGEPQLIGGAPARSTEIRSILP---- 240 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL 315 G + + ++ + ST++FTN+R +E+ L Sbjct: 241 ----------DTIDGFPWAGHLGLRMYEELVARLNPGISTLLFTNTRNQSERWHQCLRFA 290 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGE 375 + HH ++ + +R E ++K+G Sbjct: 291 CPEMEK-----------------------------GLALHHSAIDRSEREAIEASVKAGS 321 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 +R VV TSSL+LG+D V+ V+Q+ +P ++A LQR GR+ H GG S+ LF P + Sbjct: 322 IRWVVCTSSLDLGVDFQPVEQVVQIGSPKNLARLLQRAGRSAHLPGGTSQVLFMPTNALE 381 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 L++ + + + G +E PP PLDVL Q A + VR A + DL Sbjct: 382 LLELSAVRRGLVEGLVEQRKPPKAPLDVLLQHLTGLACGPGFNPEHTLQTVRSCAAYADL 441 Query: 496 PRRVFDATLDMLS-GRYPSGDFSAFRPKLVWNRETGILTARPGA-QLLAVTSGGTIPDRG 553 + +D + L G G + +R KL W + R A L + GTI Sbjct: 442 SQDDWDWCMLFLEQGGECLGAYPRYR-KLEWEETSQRYRVREKAIARLHRLNVGTITAAP 500 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 +V G +G ++E + + + D+ ++ V + + Sbjct: 501 AITVRFVRGAV------LGHVEETFISQLKPKDVFFFSGRQLEFVRLRDMTAYVKVSTKK 554 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 + +P W G L +++ L L D A + + ++ L + Q+ Sbjct: 555 TRTVPAWAGGQMA----LSDLLTHHLRLEVDRASRGDL------DNAELQALKPLFDRQQ 604 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 + + ++P L++E CR G + + GR VHE A R+ L +V Sbjct: 605 DIS-VLPTVGQLLIETCRTREG-THLFAYPFEGRFVHEGIGFLWASRLTRLERGTITVSV 662 Query: 734 SDDGIVARIPDTDGK---LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 +D G P + L D L + ++L + ++ A+ S L RFR A A LM Sbjct: 663 NDYGFELLAPKSYPMAELLEDHIDLLLDRQQLERDLKNALNLSELQRRRFRAIAQIAGLM 722 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLN 849 P Q ++ AS L ++ + P+ ++L+ +E L D ++ LE ++R Sbjct: 723 NRGFPRSSKSTGQLQISASLLFDVFSRHEPNNRLLLQAQQEVLDDQLEISRLEAALKRAA 782 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 E V T PSP A LL + M +R ++ E Sbjct: 783 SQE--WLHVETPRPSPLAFPLLVERLNNRMSNESVLERVQRMKDEAIRKE 830 >UniRef50_C3NGE7 DEAD/DEAH box helicase domain protein n=12 Tax=Sulfolobaceae RepID=C3NGE7_SULIN Length = 912 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 207/870 (23%), Positives = 362/870 (41%), Gaps = 119/870 (13%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 ++ T +Q ++ L+IAPTG GKT AA L +F++ K + Sbjct: 16 GYEDLTPIQKIAIPKILSGKNVLIIAPTGYGKTEAAILPIFYTIFKD---------KPEK 66 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 LYI+P++AL D++ L +R + V +R GD+ +ER ++ Sbjct: 67 ISTLYITPLRALNRDLESRL------------KRVGDAFGISVNVRHGDSSQRERKEILD 114 Query: 146 NPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 NPPD+LI TPE+L YL+L R+ ++ +IIDE+ + KRG L++ L+R+ + Sbjct: 115 NPPDVLIVTPETLLYLILNDTFRKYFTNLKWIIIDELQEMLDEKRGIELSVLLQRIKKIT 174 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG 264 Q IG+SAT+ +L + V V + A++ ++ +++P D Sbjct: 175 RNRIQLIGISATIGDIEMAKIYLDREGEVEVASINAIKDIKVNLILPKVEKKDADLAVRL 234 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 R + I+ + FTN+R +E + L Y+ + Sbjct: 235 GLRPDTIARLEKLNEIIKNNKPIII--------FTNTRETSEFVANHLTSNYSLK----- 281 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 SHHGS+S+E R TE KSG + +VATSS Sbjct: 282 ---------------------------IGSHHGSLSREIRIKTENDFKSGNIDAIVATSS 314 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR-TRRDLVDSAVIV 443 LELGID+G ++LV+Q +P V +QR+GR+GH++G S G P D+++ I+ Sbjct: 315 LELGIDIGRINLVVQYMSPRQVIRLIQRVGRSGHKIGRTSIGYVIPSEDVFDILECRAII 374 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 E +++ LE NPLDV A + +E +R + +K+ +F++ Sbjct: 375 EALYSSYLEKPLFEENPLDVAAHEIAGMVLEGYKNPNEILEILRNSFYFKNFTDEMFESV 434 Query: 504 LDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR-GMYSVLLPEG 562 +++L K+V RE G L T+ IPD Y V+ Sbjct: 435 IELLES-----------AKIVKRREDGSLVPSRRIWKYYYTTN-MIPDSIRSYIVI---- 478 Query: 563 EEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRG 622 + A + ++G LDE+ V + LG+ W++ I D++ V A ++ LP W G Sbjct: 479 -DHATNIKIGTLDEDFVASLDEESVFILGSKLWKVVSIENDRIFVERAELKNGILPSWFG 537 Query: 623 EGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGS 682 E E+ + +++++L G + +I ++ E Sbjct: 538 ESIPVEKEIARKVYEYIYMLEKGKIETED-----------DSISKVVREFVERGYPELRP 586 Query: 683 RHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVAR- 741 +++E ++ + II+HSP+G R + I+ + S A I Sbjct: 587 DLILVEIVKNNL----IIIHSPFGSRGNNTLGAIISVMLDVEKQTKTSYRADPYHIAISS 642 Query: 742 -IPDTDGKLPDAA--IFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR 798 +P T+ + + K+++I++ + S F + LL+ + G Sbjct: 643 VLPITENDMEKIVNTLNSLPIIKIVEILKRGIKESPQFKWK--------LLVEIKRFGMV 694 Query: 799 TPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDV 858 P + L +S I + Y D + E + E L YD+ +++ L +I +V Sbjct: 695 DPEKEITLTSS----IIKAYGDTIIGEEAVNELLVKNYDIE----ILKELKNYSWKIVEV 746 Query: 859 TTTTPSPFATSLLFGYVAEFMYQ-SDAPLA 887 S A L + ++ + PL Sbjct: 747 --YEASSLARQFLDKILNYTVFDKEEKPLM 774 >UniRef50_Q2IR64 DEAD/DEAH box helicase n=81 Tax=Alphaproteobacteria RepID=Q2IR64_RHOP2 Length = 937 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 251/986 (25%), Positives = 383/986 (38%), Gaps = 162/986 (16%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 +AD+ P LLPD F R WF P A Q A AL+IAPTG+GKTLA Sbjct: 3 IADSDAPLDLLPDRF----RHWFAARGWTPRAHQLALLRQARAQRSALLIAPTGAGKTLA 58 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRI-------------------------------- 88 FL L L + A + + + + Sbjct: 59 GFLPTLVELSEAAPNLSPIAGRGRLAGVAGKSGEGADELPIAGAAVCAEAPPHPARRAAL 118 Query: 89 -------------------LYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 LYISP+KAL D+ RNL+ P+ + + +RV Sbjct: 119 AAPPSPRARGEGSSRGLHTLYISPLKALAVDIARNLEAPIA----------QMNLPIRVE 168 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG-VETVIIDEVHAVAGSK 188 RTGDTP R++ + PPDIL+TTPE L L+L S L G ++ +++DE+HA+ SK Sbjct: 169 TRTGDTPVSRRARQRKYPPDILLTTPEQLALLLASDDAPYLFGSLQRIVLDELHALVTSK 228 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--------------------- 227 RG L+L L RL + + GLSATV ++A FL Sbjct: 229 RGDLLSLGLARLWRIA-PQLRATGLSATVADPDELARFLVPQPFVPSPLVGEGGAERSEA 287 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDV-------SSVASGTGEDSHAGREGSIWPY 280 G+ P A P+ D+ + G + Sbjct: 288 TGEGASAGAEPAAYPSPRPSPTRGEGEQADIVVARGAAQPIVEMLDTKERLPWAGHSARH 347 Query: 281 IETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT 340 I D + R+ +T+VF N+R AE L L + Sbjct: 348 ALAEIYDLIRRNTTTLVFVNTRSQAEMLFQELWRM------------------------- 382 Query: 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV 400 + D HHGS+ QR E A+ +G LR VV TSSL+LGID G +DLV+ V Sbjct: 383 -----NDDNLAIALHHGSLDVAQRRKVEDAMAAGRLRGVVCTSSLDLGIDWGDIDLVVNV 437 Query: 401 ATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNP 460 P + +QRIGRA H++ S+ + P R ++++ A ++ + + Sbjct: 438 GAPKGSSRLMQRIGRANHRLDEASRAVLVPANRFEVLECAAAIDAVAENAQDTPPQRTGA 497 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS-GRYPSGDFSAF 519 LDVLAQ + A + DE Y VR AAP+ DL R FD TLD ++ G Y + F Sbjct: 498 LDVLAQHILGCACGEPFVADELYKEVRSAAPYADLSRADFDDTLDFVATGGYALKSYERF 557 Query: 520 RPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLP----------EGEEKAGSR 569 ++ +++ A P + + GTI + M V L G G R Sbjct: 558 -ARIRQDKQGKWRVANPKVRQAYRLNVGTIVEEAMLKVKLVRSAKSKGGGHTGAIARGGR 616 Query: 570 RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPA 629 +G+++E + D G R + + DQV V+ A + AR+P + G Sbjct: 617 MLGQIEEYFIEGLTPGDTFVFGGEVVRYEALMEDQVYVSRAHDKDARVPSYMGGKFPLST 676 Query: 630 ELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLER 689 L E + L + WLA ++ + VPG LV+E Sbjct: 677 YLAERVRGLLADKQAWKGLPDQVRDWLALQSKASR--------------VPGRSELVVET 722 Query: 690 CRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI-VARIPDTDGK 748 + ++ + GR H+ + + R+ VA++ + V + DT Sbjct: 723 F-PRAAKYYLVCYPFEGRLAHQTLGMLLTRRLERARARPLGFVANEYALAVWGLGDTSHM 781 Query: 749 LPDAAI---FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQR 805 + + LF+P+ L + + SAL FR A + L+ R G Q Sbjct: 782 IRQGRLDLDALFDPDMLGDDLEAWLAESALMKRTFRYAAIISGLIARRFAGEEKSRRQVL 841 Query: 806 LRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPS 864 + ++ + PD ++ + + DL L ++ R+ G +I S Sbjct: 842 FSTDLVYDVLNKHQPDHVLLRAARADAATGLLDLRRLSDMLTRIKG---RIVHKELDRVS 898 Query: 865 PFATSLLFGYVAEFMY--QSDAPLAE 888 P A ++ E +Y SD LA+ Sbjct: 899 PLAVPVMLEIGREAVYGEASDELLAD 924 >UniRef50_A8AC71 DEAD/DEAH box helicase domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AC71_IGNH4 Length = 894 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 222/843 (26%), Positives = 355/843 (42%), Gaps = 126/843 (14%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 SLLP A R + + PT +Q + + + H L+ APTGSGKT AA L R Sbjct: 5 SLLPKELREALR---KKGIRSPTPIQEKAIPIILQGYHTLITAPTGSGKTEAALLPVAAR 61 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDV-QRNLQIPLKGIADERRRRGETEVNLR 127 + ++G + LYI+P++AL D+ R L++ E L Sbjct: 62 IIQKGSFG--------GLKALYITPLRALNRDIGIRALELL-------------REAGLN 100 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAG 186 V + GDTP R K+ +PP++L+TTPESL ++L ++ + L VE VI+DE+H + Sbjct: 101 VDVWHGDTPYSRRKKIIEHPPEVLVTTPESLNIILANKEMLKHLNNVEYVIVDELHELIE 160 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 KRGA L ++LERL QRIG+SAT+ + + FLGG R V V ++ P+I Sbjct: 161 EKRGAELTVALERLSE--RARVQRIGVSATISNVNLAKKFLGGGRFVIDVADETVKKPEI 218 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 ++ V + + VS V + + +VFTN+R AE Sbjct: 219 KVYVEDSFENMVSKVKEIIKKID-----------------------GTVLVFTNTRDTAE 255 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L L E + HHGS+SK++R Sbjct: 256 VLGKILKEEFGEE--------------------------------VAVHHGSLSKKEREG 283 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E+ + GEL+ +VATSSLELGID+G+V V+Q A+P V + +QR+GRA H+ KG Sbjct: 284 VERRARKGELKVIVATSSLELGIDIGSVKHVVQFASPRRVTNLVQRVGRAEHKPYESPKG 343 Query: 427 LFFP-RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 + ++ VI + G LE + NPLDVLA Q V + + Sbjct: 344 SVVTGLKPYEAFEALVIAKRAERGNLEEIRVHENPLDVLAHQIVGTLVEGPRHKERLFDL 403 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 VRRA P+ L + F+ ++L KLV + + G + + Sbjct: 404 VRRAYPFWGLSYQDFEEVFNLL-----------VENKLVSCDGSFCRATKKGE--IYYRT 450 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 G I + Y V++ E VG LDEE V + D LG W+ + + V Sbjct: 451 TGMIVESKQYKVIVYGTNE-----VVGTLDEEFVVDLEPGDTFVLGGKVWKFIGMENENV 505 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANI 665 V + G P W GE ++ +G F I + ++ + Sbjct: 506 YVERSEGEGP-PPSWEGELIPVDRKVAREVGALKR------AFDLLIDNYPTDQEGKERL 558 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 + + R+ G V + +V E + I+ + G + + A A++ + Sbjct: 559 REFL---RSVKGPVANDKVVVAE-----VEGNVIVYNVHGGSKANLALAYALSELARYEF 610 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIF-LFEPEKLLQIVREAVGSSALFAARFRECA 784 G AS + ++ +P + +F + + L +VR+AV S L+A R + Sbjct: 611 G-SASFNTTPYHVILFLPKQADEATAERLFKSLKYQDLEALVRDAVKQSKLYAWRLSKVL 669 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 R L+ L + + L ++ Y D P E ++E L + D+ + + Sbjct: 670 VRMGLLNR----KSISLDELKKVEKTLRKV---YLDLPPGKEAMKEILVEKLDIEGAKEI 722 Query: 845 MRR 847 + + Sbjct: 723 LEK 725 >UniRef50_Q7UX43 Putative ATP-dependent helicase n=1 Tax=Rhodopirellula baltica RepID=Q7UX43_RHOBA Length = 860 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 214/904 (23%), Positives = 375/904 (41%), Gaps = 87/904 (9%) Query: 1 MADNPDPSSLLPDVFSP--ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 +A + S+ + P +F +P Q TW + LV + TG+GKT Sbjct: 26 LARSMPASASKTERIQPRALVDRFFEVRDSKPFLFQRSTWKTYLDGKSGLVHSATGTGKT 85 Query: 59 LAAFLYALDRLFREGGEDTREAHKRK-TSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 LA ++ L + + + + KR ++L+++P+KAL D +Q + + Sbjct: 86 LAVWMGPLLQWMKANKDPGKWNPKRPPGLQVLWVTPLKALAGDTTAAMQAAIDEMNLPWD 145 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETV 176 +G RTGDT A +++ + P ++TTPESL LMLT R + L ++ V Sbjct: 146 LQG----------RTGDTKASLKARQMKRLPTAMVTTPESLTLMLTHERLQPQLSELKAV 195 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---RPV 233 I+DE H + G+KRG L+L RL L + Q G+SAT+ + + L G Sbjct: 196 IVDEWHELLGTKRGVQTELALARLRRL-SPTLQTWGVSATLGNLDEALESLVGPANTDDA 254 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 +++ + + ++ ++P G I + + EV + Sbjct: 255 VIIHGKSKKKTKLYSILPPVIER--------------FPWSGHIGTRMIPEVAKEVEQAS 300 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 S+++F N+R E +L L P A Sbjct: 301 SSLIFANTRSQTEIWYQKL-------LAHRPDWAGQ----------------------IA 331 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 HHGS+ R E L+ G L+ VV TSSL+LG+D AVDLVIQ+ +P A LQR Sbjct: 332 LHHGSLDTSVRQWVENGLREGSLKTVVCTSSLDLGVDFTAVDLVIQIGSPKGAARLLQRA 391 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GR+GHQ G +S+ F P +L++ A + + G+LE+ +P+DVL Q V A Sbjct: 392 GRSGHQPGAISRLAFVPTNAFELIELAAAQDSIRDGKLESRPLIKSPMDVLTQHLVTIAI 451 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDM-LSGRYPSGDFSAFRPKLVWNRETGIL 532 + E + VR+ ++ L + + +D + G + F+ + + + Sbjct: 452 GGGFESSELLAEVRQTRAFESLSEQQWQFAIDFVVRGGSTLDAYPEFKRVELVD--GRYV 509 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 + + GTI V +G +G ++E + + + D Sbjct: 510 VTQKRVMSNHRMNIGTIVSDASMRVKFLKGG------TLGTVEESFLSKVSIGDKFLFAG 563 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 + +I + V A G +P W G +EL + + L A+G + + Sbjct: 564 RLVELVRIDNSEAYVKRAKGAPDAVPRWMGGRLPLSSELAQGLRTKLQQAAEGDYVGPEM 623 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 ++ L++ Q + VP + L++E R G +++ + GR HE Sbjct: 624 KR----------MRPLLQLQAKWSH-VPAANELLIESIRTRDG-YQLFFYPFAGRLAHEG 671 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 + +A R+ + S +D G V P L P++L+ + E++ + Sbjct: 672 LSAVLAHRMSRIEKISFSFACNDYGFVLTSPKPAPLQQALDAGLLSPDRLVADIGESLNA 731 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLREC 831 + + FR A A L+ G PG + P + ++ E+ + Y PD ++ + E Sbjct: 732 TEMSRRGFRAIARIAGLIHGGYPGRQKPNKHLQASSNLFFEVFREYDPDNLLLHQCNEEV 791 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L++ + +E +RR+ G ++ I + T P LL + E + S LAER A Sbjct: 792 LENQLNASRMEDALRRIEGSQVVIREPEKVT--PMGFGLLVDRLRERL--SSETLAERIA 847 Query: 892 SVLS 895 + + Sbjct: 848 RMQA 851 >UniRef50_A8A8X3 DEAD/DEAH box helicase domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8X3_IGNH4 Length = 943 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 228/926 (24%), Positives = 372/926 (40%), Gaps = 137/926 (14%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 M + + LLP ++ R +K T VQ + + ++ L++APTG GKT A Sbjct: 1 MGVSAVEADLLPPRLVELIKE---RGWKDLTEVQKKAFKPITEGKNVLIVAPTGYGKTEA 57 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A L ++ E E +LYI+P+K+L D++ ++ Sbjct: 58 AMLPIFAKMIEERPEPLS---------VLYITPLKSLINDLKNRIEW------------W 96 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPE--SLYLMLTSRARETLRGVETVII 178 + V + GD A ERS + P IL+TTPE + L S+ R+ + V V++ Sbjct: 97 AERLGFVVARKHGDVGASERSLRLKRTPHILLTTPEGFKIDLDWASQFRKYYKNVRWVVV 156 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 DE H + GSKRG L+L LERL A QRI LSATV A L G Sbjct: 157 DEAHELVGSKRGVQLSLLLERLKAYSGRDYQRIALSATVGDPEATAKLLFGSSSRE---- 212 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + +V V + V GE A E S W IL+ V T+VF Sbjct: 213 --------KEIVKVNVKRKIELVVDSIGE---AREEDSFWKASAKKILEHVEP--PTLVF 259 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 N+R AE+L L+++ + HH S Sbjct: 260 VNTRYAAERLHEELSKI--------------------------------EGLKVEVHHSS 287 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH 418 +SKE R E+ LK G+L V+AT +LELGID+ ++ VI P SVAS LQR+GRAGH Sbjct: 288 ISKEIRQEIEKNLKDGKLDVVIATKTLELGIDISDLNKVILFKPPGSVASLLQRVGRAGH 347 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD-AL 477 ++GGVS+G+ + +D G +E P PLDVLA++ + + L Sbjct: 348 KLGGVSRGVIITTDEIEALDGYTEAVLAVKGIVEPPKVPDAPLDVLAREIIGMTLQEKRL 407 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFR-PKLVWNRETGILTAR 535 Y V+ A P+++L + FD +++L + + D + + + + + Sbjct: 408 DPSWAYEVVKGAYPYRNLTKETFDELINVLVKNKILAWDGDKLKVSYMFYKLWSFDGGEK 467 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATS 594 I +R ++ V K G++ VG+LD VY+ R I LG + Sbjct: 468 KRWSRSFGEFFSVISERDVFVV-------KWGNKVVGDLDAFYVYKYLRPESKIRLGGKT 520 Query: 595 WRIQQIT--RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 W++ I +V V PA + +P W+GE R + + E L Sbjct: 521 WKVIGIDDEGMKVYVEPATDQMGEIPLWKGEEFHRSSLIPEYAKRVLEE--------EKP 572 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 + ++ + E + +PG LE+ G + +L +R+ E Sbjct: 573 KEVKLLPDAEKKVRKVFESYKRKNIDLPGGDVYYLEKVP---GGY--VLTGFMDQRLAEA 627 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 A I ++ + + SV +S GI + + P L E + + +R+A+ Sbjct: 628 LAHLIMYKVSSEYTTAVSVRSSFTGIAVTVDGGEAPNPIK--LLKEIDDVEDAIRKAMER 685 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 S + A L G+ G TP D V E +++ + Sbjct: 686 SPYL----VQTAKEIQLSFGKL-GKVTP------------------DDGLVFEEAVKQAI 722 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL-----------FGYVAEFMYQ 881 + D+ ++ + L +I++ + + +P A ++ + + Sbjct: 723 EKYIDVEKAKKFIEMLKEKKIKVKLIKAKSLTPLAAHVMSLPAFRPWLKIIEARIVSLLK 782 Query: 882 SDAPLAERRASVLSLDSELLRNLLGQ 907 +A AE A++L L + N L + Sbjct: 783 GEAFTAEELATMLDLSPTTVENKLKE 808 >UniRef50_B4RRM3 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=5 Tax=Proteobacteria RepID=B4RRM3_ALTMD Length = 868 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 217/912 (23%), Positives = 359/912 (39%), Gaps = 129/912 (14%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 LP FS WF + Q Q + + L+IAPTG+GKTL+ FL +L L Sbjct: 4 LPAAFS----KWFKQKGWQLRDYQQTMLTEKDQHDCTLLIAPTGAGKTLSGFLPSLIELA 59 Query: 71 REGG----------------------EDTREAHKRKTSRI-------------------L 89 G +RE + ++ L Sbjct: 60 ETYGMSELAETVDDGAPIEVSETRQLSGSRETDEHVETKATDRQAKKGKEKGGFNGLHTL 119 Query: 90 YISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPD 149 YISP+KAL D+ RNL P++ + + + RTGDTP+ +R + + PP+ Sbjct: 120 YISPLKALTQDIHRNLLQPIEEMG----------LPITAETRTGDTPSHKRQRQRKKPPN 169 Query: 150 ILITTPESLYLMLTSRARETLRG-VETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSA 208 IL+TTPESL LML+ + L G ++ VIIDE H++ +KRG L+L+L RL ++ Sbjct: 170 ILLTTPESLMLMLSYADADKLFGKLKRVIIDETHSLMANKRGDFLSLALARL-SVFSPHC 228 Query: 209 QRIGLSATVRSASDVAAFLGGDRPVT-VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 +RIGLSATV + A+L G V ++ A P++ ++ Sbjct: 229 KRIGLSATVAFPETLGAWLAGSDSVANIIKVKAGEKPKVEML----------------HS 272 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 S G + Y I + ++T+VF N+R +E L L E A L Sbjct: 273 KSRMPFGGFMARYAIDDIYQAIENAQTTLVFVNTRAQSELLFQMLWEANKAAL------- 325 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 +HGS+SKEQR TE + SG LR +V TS+LEL Sbjct: 326 -----------------------PIALYHGSLSKEQRRKTEAMMASGMLRAIVCTSALEL 362 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GID G VD VIQV P V+ LQRIGRA H++ S+ L P R + ++ + + Sbjct: 363 GIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLDEPSEALLVPANRFEALECQAAITAIE 422 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 G L+ +P LD++ Q + A D Y + A P++ L R FD Sbjct: 423 KGELDGESPQPGALDIIPQFILNCLCSKADSPDTLYQEILTATPYQGLDRDDFDKLWQFT 482 Query: 508 SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAG 567 + + +L N + A + GTI + G V + Sbjct: 483 QDGGSALNAYERYQRLARNDDGTFSPANRRVIQRHRQNIGTIVEAGRLKVKRIRRGNQ-- 540 Query: 568 SRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGR 627 + +GE++E + D G R + I Q+ PA + ++P + G Sbjct: 541 GKIIGEVEEYFAQQLTPGDTFYFGGEVLRFEAIRDMQLHAKPAKAKEPKIPSYAGGQMPL 600 Query: 628 PAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVL 687 L E + L + WL + + + P +++ Sbjct: 601 STYLAEGVRAILATQTLWKTLPAQVQEWLKLQQAFSQL--------------PSPEKVLV 646 Query: 688 ERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDG 747 E+ + + ++ GR+ ++ + + R+ + S +D G + + Sbjct: 647 EQFPFRQAHY-TLYYTFDGRKANQTLGMLLTRRMEKMGIKPLSFSVTDYG--LSVASVNP 703 Query: 748 KLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLR 807 LF+P+ L + + + + + FR+ A + L R + + Q Sbjct: 704 ISQVQLQQLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHASQKTMKQVTFS 763 Query: 808 ASQLLEIAQGYP-DFPVILETLRECLQDVYDLPALERLMRR-LNGGEIQISDVTTTTPSP 865 + + + + D ++ + +++ DL L L+ R ++ + V PSP Sbjct: 764 TDLIYDTLREHDRDHILLKVARADAERELLDLRRLANLLIRYVDSATL----VNLEKPSP 819 Query: 866 FATSLLFGYVAE 877 A ++ +E Sbjct: 820 MAIPIVLDVRSE 831 >UniRef50_C6Y055 DEAD/H associated domain protein n=7 Tax=Bacteroidetes RepID=C6Y055_PEDHD Length = 840 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 202/891 (22%), Positives = 346/891 (38%), Gaps = 92/891 (10%) Query: 19 TRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA-LDRLFREGGEDT 77 W K+P Q W A LV APTG GKT + FL A +D L G + Sbjct: 12 VIKWLKSNRKKPFKFQTDAWQYYAEGYSGLVNAPTGFGKTFSIFLAAVIDELNTRAGLEK 71 Query: 78 REAHKRK------TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 R+A K+ ++++I+P+++L D+ R ++ + E++ +G+R Sbjct: 72 RQAKKKAMVKRTSGLKLMWITPLRSLAKDLARAMREVCMEL----------ELDWHIGVR 121 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRG 190 GDTP E+ K + P++LI TPES++L+L + ++ ++ DE H + GSKRG Sbjct: 122 NGDTPQNEKLKQKKAMPEVLIITPESIHLLLAQKNTHSYFDQLQCIVADEWHELLGSKRG 181 Query: 191 AHLALSLERLDALLHTS-----AQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRH 243 L + R+ LL + G+SAT+ + L D P T+V + Sbjct: 182 VMTELGISRIKGLLKERHPERLLRIWGISATIGNMEQAMEVLVPYPDVPKTIVKADLEKK 241 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 IR ++P D + G H + +L + + ++T++FTN+RG Sbjct: 242 IDIRSILP-----DHIDLLPWAGHLGHK---------LAEKLLPIIYKSKTTLIFTNTRG 287 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 AE L L + + HHGS+ E Sbjct: 288 QAELWYQTLLAL-----------------------------DENLAGLLAIHHGSIDYEL 318 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R E AL SG L+ V++TSSL+LG+D VD V+Q+ +P VA LQR GR+GH Sbjct: 319 RNWIEDALHSGSLKAVISTSSLDLGVDFKPVDTVVQIGSPKGVARFLQRAGRSGHSPYET 378 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 S F P +LV++A I E +E+ P D L Q V A D + Sbjct: 379 STIYFLPTHALELVEAAAIKEAAKTQDIESREPVVMAFDTLIQYLVTLAVGDGFDEARLF 438 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 V+ + +L + + + ++ S K+ + +R A Sbjct: 439 FEVKETYAFSELLPQEWSWIMQFITTGGDSLTAYNEFSKVSLVDGLWKVESRQTAMR-HR 497 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 GTI M V G +G ++E + + TL + Sbjct: 498 LHIGTIVSDPMLKVKFITGGY------IGMIEESFIARMKPGSSFTLAGRVLEFIMVKEM 551 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA 663 V+V + + A P W G A L G L + + ++ + Sbjct: 552 TVVVRKSKVKRAITPSWMGGRISLTANL----GAILRKKYNETLYKT------HQDIELD 601 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 I L ++Q + VP ++E + G + + GR+VHE A IA R+ Sbjct: 602 FIFPLFQKQEKVSH-VPRDDEFLIELIATKDG-HHLFAYPFEGRQVHEIMAALIAYRLGK 659 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 S+ +D G + LF P+ L + + ++ ++ + +FR+ Sbjct: 660 TTPISFSIAMNDYGFELLSEQPIPVEENDIKNLFSPKNLAEDIVASINATEMARRKFRDI 719 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDF-PVILETLRECLQDVYDLPALE 842 A + L+ PG + A+ + Y ++ + E + P L Sbjct: 720 ACISGLVFQGFPGKYIANKHLQSSAALFFNVFSDYDHHNLLLRQAYDEAFYQQIEEPRLA 779 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 ++R+ ++ ++ + T P + + + M S L++R + Sbjct: 780 AALQRIQNSKLIVTKPESYT--PLCFPIKVDSLRDSM--SSEELSQRIQRM 826 >UniRef50_Q470G5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=36 Tax=Bacteria RepID=Q470G5_RALEJ Length = 898 Score = 525 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 238/900 (26%), Positives = 355/900 (39%), Gaps = 82/900 (9%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + P + LPD+F A R W QP Q W + + L+ A TG+GKT A Sbjct: 15 LTSAPPVARKLPDLF--AARHW------QPFDFQRAVWEAIGQGQSGLLHATTGTGKTYA 66 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A+L AL +R +L+++P++AL D R L PL G Sbjct: 67 AWLGAL---LAFASPPSRPGAPPPPLTVLWLTPMRALAADTTRALIAPL----------G 113 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 E ++ VG+RTGDT + ER+ R P L+TTPESL L+LT ARETLR V V++D Sbjct: 114 ELGLDWAVGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADARETLRSVRLVVVD 173 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 E H + GSKRG + L+L RL GLSAT+ + L R V + Sbjct: 174 EWHELIGSKRGVQVQLALARLHR-WQPDLCVWGLSATLGN-------LDHARDVLLAGVS 225 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 R + P + D S G + + ++ E+ +T+VF Sbjct: 226 PERRVLVHGHTPKTLIIDT----LLPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFL 281 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE L + + + HHGS+ Sbjct: 282 NTRSQAELWYQALLD-----------------------------AKPEWAGLIALHHGSL 312 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 + R EQ LK+G LR VV TSSL+LG+D V+ V+Q+ +P VA LQR GR+GH Sbjct: 313 DRAVREWVEQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHA 372 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 G S+ P +LV++ + AGR+E P PLDVL Q V A + Sbjct: 373 PGRASRVTVVPTHSLELVEAVAARQAALAGRIEARDSPDKPLDVLVQHLVTVALGGGFRA 432 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGA 538 E + VR ++ L + L + G + +R + + + + Sbjct: 433 SELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYR-RAMPDDDGVWRVPDARL 491 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ 598 S GTI V +G +G ++E + D G + Sbjct: 492 ARRHRMSVGTIVSETTMQVRYWT-RAGSGGASLGTVEEGFIARLAPGDCFLFGGRLLELV 550 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAE 658 + V A G+ +P W G EL + + L + G P Sbjct: 551 RTQEMTAYVRRATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLDPSATPELPL- 609 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 IQ L+E Q + +P L+ E G W + L+ GR VH +A Sbjct: 610 ------IQPLVELQMRWS-ALPTPETLLAETLHSREG-WHLFLYPFAGRSVHLGLGSLLA 661 Query: 719 GRIHALWGADASVVASDDGIVA--RIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALF 776 R+ A SV +D G+ P + + L V ++ + L Sbjct: 662 WRLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGELS 721 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDV 835 RFRE A A L+ PG Q + +S E+ + Y P ++ + RE L Sbjct: 722 LRRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQE 781 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 D L + RL + + + PSP A L+ ++ E + S LA+R A +L+ Sbjct: 782 LDAHRLATTLARLASMRLDLHVLER--PSPLAFPLIVEFLREKL--STEKLADRIARMLA 837 >UniRef50_Q3JLU0 ATP-dependent helicase, DEAD/DEAH family n=75 Tax=cellular organisms RepID=Q3JLU0_BURP1 Length = 1700 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 244/648 (37%), Positives = 330/648 (50%), Gaps = 59/648 (9%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A P++ D F P WF F PT Q W LV APTGSGKTL A Sbjct: 105 ATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTLTA 164 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL ALD L R+ + + ++Y+SP+KAL D+ NL+ PL GIA E RRG Sbjct: 165 FLSALDDLVRDA--LAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL 222 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDE 180 +R +RTGDT ER ++ P IL+TTPESLY++L+S R L TVI+DE Sbjct: 223 PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE 282 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR-----PVTV 235 +HA+A +KRG+HLALSLERLDAL+ RIGLSAT + VA FL G R + Sbjct: 283 IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI 342 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 V+ R + + +P + V + +W + I + HR+T Sbjct: 343 VDTGHTRTRDLALELPPMPLGPVMA--------------NDVWERLYDRIAELAAAHRTT 388 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 +VF N+R +AE+ L + A +H Sbjct: 389 LVFVNTRRMAERAARHLADRLGAD-------------------------------AIAAH 417 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGS++KE R EQ LK G+L+ +VAT+SLELGID+G V+LV Q+ +P +A LQR+GR Sbjct: 418 HGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQLGSPRGIAPFLQRVGR 477 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 +GH +GGV KG FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA A Sbjct: 478 SGHHIGGVPKGRLFPLSRDELVECAALLDCVRRGELDVLRIPRAPLDVLAQQLVAEVACR 537 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 Y V +AAP+ L R FD L ML+ + S + L + + R Sbjct: 538 EWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGARA-AYLHRDVVAHTVRGR 596 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 GA+L AVTSGGTIPD Y+VLL +G ++E+ ES D+ LG S+ Sbjct: 597 RGARLAAVTSGGTIPDNADYAVLLEPQ-----GVNIGTVNEDFAVESLAGDVFQLGNQSY 651 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA 643 RI +I +V V A G++ +PFW GE R EL + L Sbjct: 652 RIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLD 699 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 218/936 (23%), Positives = 337/936 (36%), Gaps = 137/936 (14%) Query: 624 GNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSR 683 P E E+ + L A+ +G + + I + R A G +P Sbjct: 789 AMPVPPE-AELRAEPRRLAPALAWLTGEL---GLDAEAARQIADYLARARAALGALPTQD 844 Query: 684 HLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIP 743 LV+ER DE G ++++HSPYG R++ W +A+ R + + A+DD ++ + Sbjct: 845 TLVMERFFDESGGMQLVIHSPYGSRINRAWGLALRKRFCRSFNFELQAAATDDALILSLS 904 Query: 744 DTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQ 803 D ++ +A+ + LFAAR+R A +L +P G + Sbjct: 905 HAHSFALDEVWRYLRASSAEHVLIQALLDAPLFAARWRWNATTSLALPRFAGGRKVAPQL 964 Query: 804 QRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 QR+++ LL + P P++ +TL +CL D D L+RR+ Sbjct: 965 QRMKSEDLLATVFPDQVACAENIVGEREVPKHPLVDQTLDDCLHDAMDTEGWLALLRRIE 1024 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD 909 G++ + PSP A +L F+ DAPL ERR + D Sbjct: 1025 AGDVALVARDLPAPSPLAAEILNAKPYAFL--DDAPLEERRTQAVLARRWSDPE---SAD 1079 Query: 910 PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVAS 969 LD I V +E L + + + D L L + +++A A Sbjct: 1080 DLGALDAGAIEAVRDEAWPL-----VREPDEMHDALVGLACIADDEIASHDGWR----AC 1130 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEI------YLHRVSYP 1023 + + A+ G+ + A +R G + P Sbjct: 1131 VAQLAAGGRAARLALAGGRGLWIAAERVACMRALYGADVALDPPLAPPPGFDAPWEPEAA 1190 Query: 1024 LRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QDIWVS 1077 L D+ L +TA LA +L A V L L +G VM + D W Sbjct: 1191 LVDVIRARLTGFGPLTAAALAAPLALPAASVAIALAALEREGYVMRGRFTPGARDDEWCE 1250 Query: 1078 DEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVD 1137 + R+ +++ R PV + R L Q V P T G G D Sbjct: 1251 RHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTRGL-------------GGD 1297 Query: 1138 GVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD--- 1194 + V+ QL G AS WE +ILPAR+ DY + LDE G + W+ + Sbjct: 1298 ALAAVVHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAKAASAP 1357 Query: 1195 ----GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIG 1250 +V L +E A A Q SA + + A LA GA F +++ R Sbjct: 1358 VKTTPVVLLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHAR---- 1413 Query: 1251 ESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYA--- 1307 + L+ AL LV G++ +D +A LRAL R + A+ +R RARRG + Sbjct: 1414 --LLPVELERALGELVAAGLVNADSFAGLRALLRPA--AQRGAQRPSRARRGGALIGGMD 1469 Query: 1308 --------------------------------QPVSPRVSYNTPNLAGRWSLLQ------ 1329 P P A R + + Sbjct: 1470 DAGRWALVQRLPLAPLDFGEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREGGAEAD 1529 Query: 1330 --------VEPLNDTERM------LALAENMLDRYGIISRQAVIAE-NIPGGFPSMQTLC 1374 P +A +L RYG+ + + E + + + Sbjct: 1530 ARIARAMRAAPPQAGRHAIAPAALEHVARTLLRRYGVAFWRLLACEAEWMPSWRELLPVY 1589 Query: 1375 RSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWG 1434 R +E G I GRFV GL G QFA I LR+L + + + +S DP N+ G Sbjct: 1590 RRLEARGEIRGGRFVAGLAGEQFALPDAIPILRELRRRPAEG---LMLCVSGADPLNLTG 1646 Query: 1435 NLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQG 1470 LLP PA AG ++ G + L G Sbjct: 1647 TLLPGERVPAL------AGNRILFRDGVPIASLVGG 1676 >UniRef50_Q167Y6 ATP-dependent helicase, DEAD/DEAH box family n=28 Tax=Alphaproteobacteria RepID=Q167Y6_ROSDO Length = 817 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 230/859 (26%), Positives = 347/859 (40%), Gaps = 102/859 (11%) Query: 21 DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREA 80 DWF Q Q A L+IAPTG GKTLA FL L L Sbjct: 10 DWFASKGWQIHPHQLDMLARAHD-PALLLIAPTGGGKTLAGFLPTLIDLA---------T 59 Query: 81 HKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQER 140 R LYISP+KAL D++RNL P+ E ++ +RV RTGDT A + Sbjct: 60 APRDGLHTLYISPLKALAADIKRNLTTPVT----------EMDLPIRVEDRTGDTSAARK 109 Query: 141 SKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSLER 199 + +PP IL+TTPESL L+ + A +G+ V++DE+HA+A SKRG L L+L R Sbjct: 110 KRQRADPPHILLTTPESLALLTSYEDAPRMFKGLRRVVVDEIHALAESKRGDQLMLALAR 169 Query: 200 LDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 L L +R+GLSATV +A L P ++ P I Sbjct: 170 LQRLC-PDLRRVGLSATVDDPQAIARLLAKHPDPCEILQADPGPAPDI------------ 216 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 S G Y +L+++ H++T++F N+R AE L Sbjct: 217 ----SMLTTPKAPPWAGGNAAYAIPAVLEQIKAHQTTLIFHNTRAQAEIFFHNL------ 266 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + + + HHGS+ ++QR E A+ G+LR Sbjct: 267 ------------------------WLANEEGLPIGIHHGSLDRQQREKVEAAMVRGDLRA 302 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 +V T SL+LGID G VDLVIQ+ P +V +QRIGRA H+ SK L P R ++V+ Sbjct: 303 IVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEVVE 362 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 ++ ++AG+L+ P DVL Q + A D Y V + DL R Sbjct: 363 CHAALDAVYAGQLDGEPRGRGPRDVLCQHILITACAGPFDADALYGEVITVGAYADLTRA 422 Query: 499 VFDATLDMLS-GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 FD L + G Y + + +L+ N + P A + GTI D V Sbjct: 423 EFDECLTFCATGGYALRAYDQW-QRLMQNADGLWHLRDPRAAQKIRMNIGTIQDTDTLKV 481 Query: 558 LLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 L + G + +GE++E D +G R + + V V+ + ++ Sbjct: 482 RL---QRSRGGKPLGEIEEGFAATLTPGDTFLIGGQIVRYEGLREMTVEVSRNAAKKPKV 538 Query: 618 PFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG 677 + G +L + + F T P+L + QR + Sbjct: 539 ATFLGTKFATSTQLSARVVEI---------FQDTAWPYLPAHTA-----DWLALQRERS- 583 Query: 678 IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG 737 +P L++E G + +++ GR + + + R+ + VA+D Sbjct: 584 QLPAPGRLLIESFA-HDGRAQTVVYGFAGRNGQQTLGLLLTKRMEEMGLDPLGFVATDYA 642 Query: 738 --IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTP 795 I P TD LF+ E L + + +A+ FR A A L+ TP Sbjct: 643 TLIWGLQPVTDPAP------LFDLEALETGLETWLAGNAVMKRTFRASATIAGLIQRNTP 696 Query: 796 GHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 R Q + L + Q Y P+ ++ T E L+ + D + + R+ G + Sbjct: 697 SARKTGRQATFSSDILYDTLQKYDPEHLLLDVTREEALRGLVDFGRIREMAERVAG---R 753 Query: 855 ISDVTTTTPSPFATSLLFG 873 I VT SP A +L Sbjct: 754 IDHVTLPRVSPLAAPMLLE 772 >UniRef50_B6YUR4 Large helicase-related protein n=5 Tax=Euryarchaeota RepID=B6YUR4_THEON Length = 1389 Score = 515 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 171/698 (24%), Positives = 293/698 (41%), Gaps = 40/698 (5%) Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI-- 285 G V V+ +R I N+ + +++G G I + Sbjct: 713 GTSYTVAVLGGDYLRTFGELIEPWRPNLRKIKGLSTGYSNRDVIPNLGKKLREIRETLGI 772 Query: 286 ----LDEVLRHRSTIVFTNSRGLAEKLTARLNELY--AARLQRSPSIAVDAAHFESTSGA 339 L ++ + V +R ++ + RL + Y A+ + + + + + Sbjct: 773 SSYRLQKMGIYNPMKVELGTREISRRNLVRLLDFYEMVAKEREMSDVLAEIQRLKELAEG 832 Query: 340 TS--NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 +R++S + + +G ++ E S +++SLELGID+G +DLV Sbjct: 833 DVFFDRIESIEPVFIKEAYGILNSETGNYVVNGFVSKN-----SSTSLELGIDIGTIDLV 887 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 I + +P SV LQRIGRAGH++ VSKG+ R DLV+ V+ RL + P Sbjct: 888 ILIGSPKSVNRALQRIGRAGHRLHDVSKGIILALDRDDLVEVTVLAHNARNRRLNRVRIP 947 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 NPLDVL Q + A +VDE Y VRRA P+ DLP F + L L+G Y + Sbjct: 948 RNPLDVLVQHLLGMALNQVWEVDEAYKLVRRAYPFHDLPYEDFMSVLKYLAGEYAGLEEK 1007 Query: 518 AFRPKLVWNRETGILTARPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 K+ E G R + + + GTIPD V + + +G ++E Sbjct: 1008 KVYAKIWL--EDGKFGRRGKMTRAIYYMNVGTIPDEAKIKVYTMD------KKLIGTVEE 1059 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 E DI L ++ + +++ V P G +P W E +L + Sbjct: 1060 EFAERLMPGDIFVLAGRTYEFIKSRGNKIYVIPREGAKPTIPAWFSEMLPLSFDLALDVQ 1119 Query: 637 DFLHL----LADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRD 692 F L + S + +E I EQ + ++P +++E Sbjct: 1120 RFRREVKNLLDKESAKSLLTKKYGIDERAARAILSYFREQARYS-VIPDDSTVLVEEVLG 1178 Query: 693 EIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDA 752 E R H+ GRR ++ + A A + + + +D+G +P + Sbjct: 1179 EK-RNRYFFHTLIGRRANDALSRAFAYIVSQWKNCNVGIAINDNGFALLLPPEKRLNEEE 1237 Query: 753 AIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLL 812 LFE L +++A+ ++ L RFR A R LL+ R G L +Q++ A LL Sbjct: 1238 IRALFEIGDLRGTLKKALDNTELLKRRFRHVANRGLLILRRYIGRSKRLGRQQMMAVALL 1297 Query: 813 EIAQG-YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 ++ + YPDFP++ E RE ++D D+ + E+ + + G++++ PSPFA +L Sbjct: 1298 KVLKENYPDFPLLKEVYREIMEDKMDVESAEQFLSWVRDGKVRVVIEHNELPSPFAFNL- 1356 Query: 872 FGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD 909 E + SD L E R ++ +L R ++ ++ Sbjct: 1357 -----EVIGSSDVVLMEDRRELI---KQLHRKIMAMIE 1386 Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats. Identities = 138/424 (32%), Positives = 204/424 (48%), Gaps = 58/424 (13%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A+ + ++ S R+WF R F T Q + E+ L+ +PTGSGKTL+A Sbjct: 9 AEREYADEEIFEILSEPVREWFKRKFGTFTPPQRYAVIEIHKGENVLISSPTGSGKTLSA 68 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL A++ L G +E +LY+SP++AL D++RNL+ PL I + + G Sbjct: 69 FLAAINELILLG----KEGKLDDKIYVLYVSPLRALNNDIKRNLEGPLAEIKEVAKELGY 124 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDE 180 +RVGIRT DT + E+SK+ R PP ILITTPESL + L + RE LR V+ +IIDE Sbjct: 125 ELPEIRVGIRTSDTSSYEKSKMVRKPPHILITTPESLAIALNAPKFRERLRTVKYLIIDE 184 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 VHA+A +KRG+HLALS+ERL L + RIGLSAT+ +VA F V Sbjct: 185 VHALAENKRGSHLALSIERLANLAESEFVRIGLSATIHPLEEVAKF--------VFGFDD 236 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P+ ++V V+ + ED G++ + + + + HR+T++FTN Sbjct: 237 EGKPRPGLIVDVSFAKETRIWVESVVEDLIYTDAGTLSDALYKRLAELIREHRTTLIFTN 296 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R AE++ L + Y + +HH S+S Sbjct: 297 TRSGAERVAFNLKKRYPE-----------------------------FEGLIEAHHSSLS 327 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 +E R E+ LK GEL+ VV + + + A G +RI R G + Sbjct: 328 REVRLDVEEKLKRGELKAVVC----------------VPGHSKIFTAEGTRRIDRLGEKT 371 Query: 421 GGVS 424 V Sbjct: 372 AIVG 375 >UniRef50_C5CN99 DEAD/H associated domain protein n=9 Tax=Proteobacteria RepID=C5CN99_VARPS Length = 952 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 232/888 (26%), Positives = 361/888 (40%), Gaps = 80/888 (9%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 A WF +P Q W A L+ A TG+GKT A +L AL + Sbjct: 85 ALDAWFAARGWKPFKFQRDVWKAVAAGRSGLLHATTGAGKTYAVWLGALQAFSSAAPPPS 144 Query: 78 REAH--KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 R A +L+I+P++AL D R LQ PL+ + + G G R+GDT Sbjct: 145 RSARATPPPPLTVLWITPMRALAADTLRALQQPLEAMDAQ----GIDLHRWSAGARSGDT 200 Query: 136 PAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 + ERS P +L+TTPESL L+L + A E L V V++DE H + G+KRG + Sbjct: 201 SSAERSAQNERLPTVLVTTPESLSLLLARADASEVLGRVRMVVVDEWHELLGNKRGVQVQ 260 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L+L RL + G+SAT+ + + L GD+ +V + + ++P Sbjct: 261 LALARLRR-WNAGLAVWGMSATLGNLQEAMHALLGDQEGVLVQGAVPKKLVVDSLLP--- 316 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 G G + + +LDE+ +T+VFTN+R +E Sbjct: 317 -----------GRAERFPWGGHLGLTMLPQVLDEIAASSTTLVFTNTRSQSEI------- 358 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 Y A L+ P A + HHGS+ + R E LK+G Sbjct: 359 WYQAMLEARPEWA----------------------GLIALHHGSLDRAVREWVELGLKNG 396 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 EL+ VV TSSL+LG+D V+ V+Q+ +P VA LQR GR+GH G S+ P Sbjct: 397 ELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRITLVPTHSI 456 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 ++V+ A + AG +E P PLDVL Q V A D+ Y+ VR A + D Sbjct: 457 EMVEGAAARAAIAAGHIEARHTPVQPLDVLVQHLVTVALGGGFVPDDLYAEVRGTAAYAD 516 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 L R + L +S PS + V + E + GTI Sbjct: 517 LSRESWAWCLAFVSQGGPSLAAYPDYRRAVPDAEGVWRVPDARLARRHRMNIGTIVSDAS 576 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 +V + G R+G ++E V + D G + +I V A G+ Sbjct: 577 MAV------QYMGGARIGSVEEGFVARMKPGDCFLFGGRLLELVRIHDMTAWVRRATGKR 630 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 A +P W G L + + L L G + S + ++ L+E Q+ Sbjct: 631 AAVPRWNGGRMPLSTTLADAVVQQLALAGAGRYNSPELQ----------CVRPLLEIQQQ 680 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 + +P L+ E G + L+ GR VH A +A R+ S+ + Sbjct: 681 WS-ALPTPETLLAETLATREGS-HLFLYPFAGRHVHMGLASLLAWRVAQHEARTFSIAVN 738 Query: 735 DDGIVAR--IPDTDGKLPDAAIFLFEPEK----LLQIVREAVGSSALFAARFRECAARAL 788 D G P L + L + E LL V ++ + L RFRE A + Sbjct: 739 DYGFELLSATPVDWPALLPQVLRLPQGEDAHATLLHEVLASLNAGELAQRRFREIARVSG 798 Query: 789 LMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRR 847 L+ PG + Q + +S E+ + Y P ++L+ +E L ++ L + R Sbjct: 799 LIFQGYPGEKRSSRQLQASSSLFWEVFRKYDPANKLLLQAEQELLAQELEIGRLAASLAR 858 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 + ++ + P+PF+ L+ E + + A+R A ++ Sbjct: 859 MATQQLVLK--PLERPTPFSFPLMVELFREKLSNENV--ADRIARMVE 902 >UniRef50_Q1CZG3 ATP-dependent helicase, DEAD/DEAH box family n=5 Tax=Bacteria RepID=Q1CZG3_MYXXD Length = 860 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 229/861 (26%), Positives = 352/861 (40%), Gaps = 89/861 (10%) Query: 19 TRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 R WF P Q + W AR E L+ PTG+GKT AA+L L + G Sbjct: 57 LRGWFRAKGWTPYPFQEEAWAAHARGESGLIHVPTGAGKTYAAYLGPLADVAANG----- 111 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 + ++LY++P++A+ DV++ L+ PL + + ++ V RTGDT + Sbjct: 112 ----QPGLQLLYVTPLRAVSRDVEKALREPLTVL----------DADITVESRTGDTSSS 157 Query: 139 ERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 R + P +LITTPESL ++LT RA E + +VI+DE H + GSKRG+ L L+ Sbjct: 158 VRQRQRERLPQVLITTPESLCVLLTHERAPELFASLRSVIVDEWHELLGSKRGSQLELAQ 217 Query: 198 ERLDALLHTSAQRIGLSATVRSASDVAAF-LGGDRPVTVVNPPAMRHPQIRIVVPVANMD 256 RL + LSAT+ + + A +G + T+VN R + ++P + Sbjct: 218 ARLRHFA-PGLRTWALSATLANLEEAARHAVGTGQTPTIVNAALERPVVVETLLPES--- 273 Query: 257 DVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 G + + + + RST++FTN+R AE+ L Sbjct: 274 -----------VDAFPWAGHLGFSMLARVGAWLDAERSTLIFTNTRSQAERWFEGLR--- 319 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 + + HHGS+ +E+R E LK G L Sbjct: 320 --------------------------FARPEWEHLIALHHGSIDREERERVESGLKEGSL 353 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 R VV TSSL+LG+D G V+ V+QV +P + +QR GR+ H+ G LF P +L Sbjct: 354 RIVVCTSSLDLGVDFGPVERVVQVGSPKGIGRTMQRAGRSAHRPGATCHILFVPTHALEL 413 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 V+ A + + +E TPP PLDVLAQ V A D VR AA + L Sbjct: 414 VEMAAAKDALLRREVEARTPPDKPLDVLAQHLVTCALGGGFTPDALRDEVRTAAAFAGLT 473 Query: 497 RRVFDATLDMLSGRYPS-GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMY 555 F TL ++ P+ + FR V E + A + + GTI + Sbjct: 474 DEEFAWTLSLVREGSPTLRAYPEFRR--VVEHEGRCVVADARVARMHRLNIGTITSDAVV 531 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 + G R+G ++E V + D +I V PA + Sbjct: 532 QLRYWSGG------RLGSVEESYVSRLKPGDTFIFAGKKLEFSRIQDMTAYVRPAKTKVT 585 Query: 616 RLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNA 675 + P W G L + L G S + + A + Sbjct: 586 QTPRWGGSRLPLSGSLAAAVRRTLDTARHGDVTSDELAAAWPVLDAQARLSR-------- 637 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 +P + L+ E C+ G + L+ GR VHE A +A R+ L A ++ +D Sbjct: 638 ---IPAADILLAETCQTRDG-HHLFLYPFEGRLVHEGLAALLALRLTRLRKATFTLSVND 693 Query: 736 DGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTP 795 G+ P LF E+L V E+V L +FR+ A A L+ P Sbjct: 694 YGLELLTPTPFPFEEALHPALFTRERLEADVLESVNVGELSKRQFRDIARIAGLVLPGLP 753 Query: 796 GHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 G R Q + AS L ++ Y PD ++++ RE L+ ++ LER + RL ++ Sbjct: 754 GARKSSRQVQASASLLHDVFIKYDPDNLLLVQARREVLEQQFEEGRLERTLERLQAAPVE 813 Query: 855 ISDVTTTTPSPFATSLLFGYV 875 V P+P L+ + Sbjct: 814 RIHV--RRPTPLGFPLVVERI 832 >UniRef50_Q0BTQ2 ATP-dependent helicase n=27 Tax=Alphaproteobacteria RepID=Q0BTQ2_GRABC Length = 855 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 237/874 (27%), Positives = 359/874 (41%), Gaps = 91/874 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 +L P WF R Q A AL+IAPTG GKTLA FL +L L Sbjct: 1 MLQTTLPPRFAAWFERRGWTLRRHQAAMLDAAEADRSALLIAPTGGGKTLAGFLPSLISL 60 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 R+ + T LY+SP+KAL TD+ RNL P++ + + +R+ Sbjct: 61 ARQAELPKGQPEGLHT---LYVSPLKALATDIARNLTSPVQEMG----------LPIRIE 107 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAVAGSK 188 RTGDTP+ R++ PP IL+TTPESL L+L+ +G+ TVIIDEVHA+AG+K Sbjct: 108 TRTGDTPSGRRARQRETPPHILLTTPESLSLLLSLEDAPTFFQGLRTVIIDEVHALAGTK 167 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RG LAL L RL L+ + GLSAT + ++GGD V+ P++ + Sbjct: 168 RGDQLALCLARLRRLV-PGLRMSGLSATAAHPQALRDYIGGD--AIVIEEAGGAPPRLEM 224 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 ++P + G + IL+ + TIVF N+R AE L Sbjct: 225 MLPSGRL----------------PWSGHMGLAAAPAILERIKAAAMTIVFVNTRAQAELL 268 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L L + + HHGS+ EQR E Sbjct: 269 FQALWRL------------------------------NEETLPIALHHGSLELEQRERVE 298 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 QA+ SG LR VVATSSL+LGID G VD V+Q+ P V+ LQR+GRA H++ S + Sbjct: 299 QAMASGLLRAVVATSSLDLGIDWGGVDQVLQIGAPKGVSRLLQRVGRASHRMDEASNAIL 358 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 P R ++++ + + A L+ P LDVLAQ + A D + VR+ Sbjct: 359 VPANRFEVLECEAAIMGVSARELDGDPPGPGGLDVLAQHLLGMACSAPFHPDTMFEEVRQ 418 Query: 489 AAPWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 AAP++ L R+ FD TL + +G Y + + +L + E + + G Sbjct: 419 AAPYRMLDRKDFDDTLGFVETGGYTLSHYEQW-HRLFRDSEGLLHVRSDRVARQWRMNIG 477 Query: 548 TIPDRGMYSVLLPEGEEKAGSRR---VGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 TI M V L K R +GE++E + R D G R Q+ Sbjct: 478 TIVQSPMIKVRLRGNRGKRAEGRGSTLGEVEEYFASQLRPGDTFMFGGRLLRFVQLHDTV 537 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 + +P + G L + L + WL Sbjct: 538 LEADEGGDGDPMVPAYAGARLPLTTSLANRVRGMLQDRQGWQHLPDPVREWL-------- 589 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 E++ +PG L++E W ++ + GR H+ + + R+ L Sbjct: 590 ------EKQRIRSRLPGRNDLLIETF-PRGDRWYMVAYCFEGRNAHQTLGMLVTKRMERL 642 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 VA+D + + P LFE + L + + S++ FR A Sbjct: 643 GMIPLGFVATDYVMA----TWSARQPTGLDRLFEEDILGDDLEAWMAESSMLRRIFRHVA 698 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALER 843 + L+ + PG + Q + + ++ + + PD ++ T + + D+ L Sbjct: 699 VVSGLIERQQPGLKRSRRQVTINTDLIYDVLRRHQPDHILLRATRADAASGLTDIGRLAL 758 Query: 844 LMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAE 877 L+RR G I + + SP A +L E Sbjct: 759 LLRRARG---HIRHMALSRVSPLAVPVLLEIGRE 789 >UniRef50_Q6KZS3 ATP-dependent RNA helicase n=4 Tax=Thermoplasmatales RepID=Q6KZS3_PICTO Length = 901 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 195/846 (23%), Positives = 356/846 (42%), Gaps = 117/846 (13%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LL D A + + +PT VQ + + ++ L+I+PTGSGKT AA L L+ Sbjct: 9 DLLDDNVLSAV---YRQGIIEPTLVQSMAIPLILQGKNLLIISPTGSGKTEAAILPILNM 65 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + RE + K +LY++P++AL D+ L + + + V Sbjct: 66 ISRE---------RPKPVSLLYVTPLRALNRDMLSRLFEYSRNL------------GINV 104 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGS 187 +R D ER ++ R+P DILITTPESL +ML ++ RE + ++ ++IDEVH +A + Sbjct: 105 QVRHSDINESERREIVRHPGDILITTPESLQIMLVNKNLREIISNIKYLVIDEVHEMAQN 164 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 +RG+ +++LERL L + Q IGLSAT + ++A F+ D+ + +V P + +I Sbjct: 165 ERGSQFSIALERLREL-NHGFQVIGLSATANNELELAEFIEPDKKIEIVKPEIRKSVEIN 223 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +P ++S ++ +AG I+ I ++VF N R +AE Sbjct: 224 VTLPEKASQELSDKMG--CDNQYAGSIKRIYNEINNI-------SGGSLVFVNRRYVAED 274 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 ++ R+ + HHGS+S+E R Sbjct: 275 MSFRIKLMDKNAR-------------------------------IEVHHGSLSRESRENA 303 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E KSG+L+ ++ TSSLELGID+G +LV+Q +P + LQRIGR+GH + S+GL Sbjct: 304 ENDFKSGKLKALICTSSLELGIDIGTAELVVQFNSPRQINKLLQRIGRSGHSLEKTSRGL 363 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRV 486 +L ++ IV G+LE++ N L +A Q + + ++Y+ + Sbjct: 364 VVCNDVIELEEAMAIVGNALEGKLEDVLIRKNSLATVANQVMLELYFKKKMNYIDFYNLI 423 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 +RA P+KDL + + ++ L+ K++ + + + R + + Sbjct: 424 KRAYPFKDLSIDDYLSVINFLAS----------IKKIIIDGDN--IIKRYSILNYYINNI 471 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQV 605 IP +Y V+ ++ + +G LDE+ V E + ++WR +I +++ Sbjct: 472 SMIPSEKIYRVI-----DQTNKKFIGTLDEKYVVNEIEPGSYFVMKGSTWRTIRIDEEKI 526 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANI 665 +V P +A P W GE + F L + Sbjct: 527 LVEP-FNTAAIAPHWTGEEIPVLYRAAARVSYNRKNHIIMDFLDDESKKHLIKWYE---- 581 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 + ++++E II+ G + A + G + ++ Sbjct: 582 -----------NDLATDDNIIIE-----SQGNEIIIQVLLGTMGNFALAEILTGLLTSIT 625 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLL-QIVREAVGSSALFAARFRECA 784 G + S I R+ + I K + ++ + S F F A Sbjct: 626 GESVEMDYSPYHIYLRLNRSMSSQQIMDIIKNIDIKNIFGYIKASARRSRFFNTVFLYEA 685 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 + ++ + +L +I + Y + P+ +++R+ + D D+ L++ Sbjct: 686 RKFGVISNDAD----------ISRIRLEKIIESYINTPLYEDSIRKLVFDYMDIDILKKY 735 Query: 845 MRRLNG 850 + +N Sbjct: 736 LENINN 741 >UniRef50_D0DB43 Dead/H associated domain protein n=4 Tax=Alphaproteobacteria RepID=D0DB43_9RHOB Length = 913 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 226/873 (25%), Positives = 348/873 (39%), Gaps = 101/873 (11%) Query: 7 PSSLLPDV--FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 + + PD+ + WF R Q Q A + L+IAPTG GKTLA FL Sbjct: 101 CAPIFPDMRALPTPLQGWFDRRGWQIHPHQSAMLERA-DAPCLLLIAPTGGGKTLAGFLP 159 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L L R LY+SP+KAL D++RNL IP++ E + Sbjct: 160 TLAEL---------TEAPRSGLHTLYVSPLKALAADIRRNLLIPIE----------EAGL 200 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHA 183 +RV RTGDTPA + + +PP IL+TTPESL L+ + A G++ V++DE+HA Sbjct: 201 PIRVEDRTGDTPASRKKRQRADPPHILLTTPESLALLTSYEDAPRMFAGLQRVVVDEIHA 260 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMR 242 +A SKRG L L+L RL + +R+GLSATV +A L P +V Sbjct: 261 LAESKRGDQLMLALARLQGMC-PDLRRVGLSATVEDPQTIARLLARHPDPCEIVEADPGP 319 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P I ++V ++ G Y +L++V +HR+T++F N+R Sbjct: 320 EPDISMLV----------------TEAAPPWSGGGAAYSIPAVLEQVKQHRTTLIFHNTR 363 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 AE L + + D HHGS+ + Sbjct: 364 AQAEIFFHNL------------------------------WLANEDALPIGIHHGSLDRG 393 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 QR E A+ GELR +V T SL+LGID G VDLVIQ+ P +V +QRIGRA H+ Sbjct: 394 QREKVEAAMVRGELRAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNA 453 Query: 423 VSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 SK L P R ++V+ +E + L+ P DVL Q + AA D Sbjct: 454 PSKALLVPANRFEVVECLAALEAVKEHDLDGEWRGRGPRDVLCQHILIAACAGPFGADAL 513 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLS-GRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 Y+ + +A + DL R FDA L + G Y + + +L+ + P + Sbjct: 514 YAEMTQAGAYADLTRAEFDACLAFCATGGYALRAYDRW-QRLLQRPDGLWQLRDPRSAAR 572 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT 601 + GTI D V G +GE++E D +G R + + Sbjct: 573 IRQNIGTIQDTDTLKVRWRG----RGGAPLGEIEEGFATSLSKGDTFLIGGQIVRYEGLR 628 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT 661 V VT + ++ + G +L I WLA + Sbjct: 629 EMVVEVTRDAAKKPKIATFMGTKFATSTQLSHRILRMFRQPG-WPGLPAHTAEWLALQRE 687 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 ++ + P L++E G +++ + GR + + + R+ Sbjct: 688 VSRL--------------PEPGRLLIESF-PHDGREQLVAYGFAGRNAMQTLGLLLTKRM 732 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 A V+SD ++ LF+ KL + + +A+ FR Sbjct: 733 EEEGLAPMGFVSSDYAVLI----WGLDAVTDPAPLFDLAKLEAGLETWLQGNAVMKRTFR 788 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPA 840 A A L+ T G R Q + + L + Y PD ++ T E ++ + D Sbjct: 789 ASATIAGLIERNTAGQRKSGRQATMSSDILYDTLVKYDPDHILLQITREEAMRGMVDFSR 848 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFG 873 + + R+ +I + SP + L Sbjct: 849 IREMCERVGD---RIDLLRLDRVSPLSAPLFLE 878 >UniRef50_Q8TGY8 Lhr-like Superfamily II helicase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY8_METKA Length = 910 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 258/1007 (25%), Positives = 363/1007 (36%), Gaps = 145/1007 (14%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LPD + F +PT Q ++ LVIAPT SGKT A L Sbjct: 6 EALPDD----VQRVVYSRFDEPTPPQRVAIPEIMDGKNVLVIAPTSSGKTETAVLPVFSM 61 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + + LYI+P++AL D+ R + R ++ L V Sbjct: 62 V---------RELDEPGIKALYITPLRALNRDILRRI------------RWWGEKLGLEV 100 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGS 187 +R GDTP ER + +PPD+L+TTPE+L +L R RE L V VI+DEV+ +A Sbjct: 101 AVRHGDTPQSERRRQAEDPPDVLVTTPETLQAILPGKRMREHLSHVRHVIVDEVNELALD 160 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRG L L LERL + QRIGLSA V S V FL GDR V V+ A R+ + Sbjct: 161 KRGVQLTLGLERLAEVAG-DFQRIGLSAAVGSPDRVGKFLVGDRDVEVLEIEAERYLDVS 219 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + P + + I + S +VFTN+R +AE Sbjct: 220 VAHPTGPHEVKERL---------------------ELIHELAKERDSVLVFTNTRQMAEL 258 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L RL Y D HH S+S+E+R Sbjct: 259 LATRLKTEY-------------------------------DDIEVEIHHSSISREKRMEV 287 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ K GE+ +V TSSLELGID+G VDLV+Q +P V +QR+ + ++GL Sbjct: 288 EKRFKKGEIDVLVCTSSLELGIDIGHVDLVVQYGSPRQVTRLVQRV-GRAGRRRKRAEGL 346 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVDEWYSRV 486 DL ++AVI G LE P LDVLA Q V + VD Sbjct: 347 VITSNPDDLAEAAVICRRALKGSLEPTEIPEGCLDVLAHQLVGLCLDGHQVTVDYALEVF 406 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 RRA P++ L + L D R + + A ++ Sbjct: 407 RRAYPYRHLDAETLREVAEFL------DDIEVLRVR------GDRVYRTKDAWKYYYSNL 454 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQ- 604 IPD Y V+ G V LDE V E R W +Q + D+ Sbjct: 455 SMIPDERHYRVVTESGGH------VSVLDEPFVLEYLRPGIKFICAGRPWIVQDVDHDRY 508 Query: 605 -VIVTPAPGRSARLPFWRGEGNGRPAELGEM----IGDFLHLLADG--AFFSGTIPPWLA 657 V+VTPA +P W GE P E+ IG L DG + Sbjct: 509 EVLVTPAEAVEGAIPSWVGEEIPVPYEVAREVGEGIGRAEAALEDGFTEAVEVAAETFGL 568 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 + LI QR + VP V+E +++H G + + Sbjct: 569 GRREAKVLADLIRRQREHS-AVPLPERPVIEDL-----GGTLVIHVYGGTNPNRTLEKVL 622 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF-----EPEKLLQIVREAVGS 772 I G ++ IV G D + + + V Sbjct: 623 GTLISGRLGTTVRTYSTPYKIVISAEKRAGLDADLLMECLETLPSDERGFHALTLRIVEK 682 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 S +F R R + + + + + P ET+ E Sbjct: 683 SEVFKRRLVHVLKRFGAIEPDADYRDVSPRR----------LLKAFKGTPPYYETVSEVE 732 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 +D D RL++ L + V PSPFA +L + E + LA A Sbjct: 733 RD-LDTSVAFRLVKELEE---KAEIVRVRDPSPFAEHVL-EGLGEVGRVTSGLLA---AQ 784 Query: 893 VLSLDSELLRN--LLGQVDPGELLDPQVIRQVEEELQRLAPG----RRAKGEEGLFDLLR 946 V +L +L R LG + G V EE L+ G AK EEGL LL+ Sbjct: 785 VETLKRDLERRKLWLGCPNCGWRGRRSVKTVKEEGLECPDCGATYLVAAKTEEGLEKLLK 844 Query: 947 --ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERL 991 E + L + E +A A ++ + + Sbjct: 845 DSERARRVADLLESYGAKALEALAVPGVGPEAAAKVLRSTGGREPHF 891 >UniRef50_A4YHK3 DEAD/DEAH box helicase domain protein n=12 Tax=Sulfolobaceae RepID=A4YHK3_METS5 Length = 931 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 208/863 (24%), Positives = 359/863 (41%), Gaps = 142/863 (16%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 R + + T +Q R + L+IAPTG GKT AA L L L EG ++ Sbjct: 15 ERNWTKMTQIQEMAMEPILRGNNTLIIAPTGFGKTEAALLPILS-LMSEG--------EQ 65 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 K ++Y++P+KAL D+ + +++ V + G+ P +E++ Sbjct: 66 KPVSLIYVTPLKALINDITIRIDW------------WASKLGFVVSRKHGEVPQKEKNMR 113 Query: 144 TRNPPDILITTPESLYLML--TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 R P IL+TTPE L + + S+ R+ R V+ VIIDE+H + GSKRGA L + LERL Sbjct: 114 LRKAPHILVTTPEGLEIDMDWASKFRDNYRNVKWVIIDEIHELMGSKRGAQLFVLLERLK 173 Query: 202 ALLHTSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 QRIGLSAT+ + VA L G RP T+V A + +++I Sbjct: 174 DFSGKDFQRIGLSATISNEELVANTLFGSSSRPKTIVKSEAGKEFRLKI----------- 222 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 G +W I + + T+VFTNSR L E+L L L Sbjct: 223 ---------RSIKDSGDVWVASAKIIKESLEP--PTLVFTNSRFLTERLHEELERL---- 267 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 HH S+S++ ++ E+ L+SG+ V Sbjct: 268 ----------------------------GEKGIFVHHSSISRDSKSNAEENLRSGKAGAV 299 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDS 439 + T +LELGID+G V +I P SVAS LQR+GR+GH VGG+ G D +++ Sbjct: 300 LCTKTLELGIDVGKVKKIIMYRPPPSVASFLQRLGRSGHCVGGIPYGEIICVQDFDCLEA 359 Query: 440 AVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRR 498 I G+LE PLDV+A++ + +++++ +S + + ++DL R Sbjct: 360 LAIYSLSRKGKLEPPR-RVRPLDVVAREILGMLLQYSSIKLERVFSIITASQVYRDLTRE 418 Query: 499 VFDATLDMLSGR---YPSGDF----SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 F + L GD +F +NR + A+ ++ I + Sbjct: 419 EFQNLISYLQRNNLVVVEGDELKLGKSFFKIWTFNRSNNFVWAKNFSEFF-----SLISN 473 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIV--T 608 +++ ++G + +GE+D VY+ R D+I + W++ +I ++V T Sbjct: 474 DDAFTL-------RSGEKIIGEIDAIYVYKHIRPGDLIRISGKLWKVARIHNGMMMVDLT 526 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGL 668 PA +P WRGEG + + I + + + +++ A+++ L Sbjct: 527 PADRGEGEIPIWRGEGVPKSQLIPREIQELFK------IGDKILESEILDDSAKASLKAL 580 Query: 669 IEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 +E+ + +P S + + + D + + RV A + + + + Sbjct: 581 MEKYVRSKLPLPSSSTIYM-----TVTDKETVYSTLIDERVANTIAHMLMYLASSKYTLN 635 Query: 729 ASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARAL 788 AS G I D D + + E++ +I+ ++ S LF + +E A Sbjct: 636 VYTRASIYGFSINITDRD---LLRELVQMKEERIRKILFRSILRSPLFMSVEKEIQASFG 692 Query: 789 LMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRL 848 + P D +I E LR+ ++ +++ ++R+ Sbjct: 693 KIGKINPK----------------------EDKLIIKEGLRQTVKRYFNIKGTLTTLKRI 730 Query: 849 NGGEIQISDVTTTTPSPFATSLL 871 G+I+I +P ++L Sbjct: 731 REGKIRIVRSEL---TPLGEAVL 750 >UniRef50_A1RYY4 DEAD/DEAH box helicase domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYY4_THEPD Length = 946 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 221/875 (25%), Positives = 351/875 (40%), Gaps = 122/875 (13%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LLP A + +++ VQ ++ ++ + L+ APTG+GKT AA L L Sbjct: 22 DLLPGRILEALSRF---GYRELNYVQVKSLELSRVYPNMLISAPTGAGKTEAAVLPVLRD 78 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L +GG K LY++P++AL D+ + + + E Sbjct: 79 LVEKGG---------KPIYALYVTPLRALNRDIYDRMVELFRALGFEAE----------- 118 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGS 187 +R GDTP + R ++ +PP +LITTPE+ +L R RE L+ V++DEVH + Sbjct: 119 -VRHGDTPQRVRRRIAESPPHMLITTPETTQFLLVDGRYREHLKNTRWVVVDEVHELLDD 177 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRGA L+L+LERL L+ + +GLSAT+R L G R TVV + ++ Sbjct: 178 KRGAQLSLALERL-RLISPGLRVVGLSATLRDPEAALRLLSGGRVGTVVEWFERKAYELV 236 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +D+ G + E+ R IVFTN+R AE Sbjct: 237 V-------EDIDEEGDLAGRVKR---------------VAELCRGGGVIVFTNTRDTAEF 274 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L Y R HHGS+S+++R Sbjct: 275 IGRVLARDYG--------------------------------LNVRVHHGSLSRQEREEA 302 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ KSG + +VATSSLELG+D+G LV+Q +P QR+GRAGH + VS+G+ Sbjct: 303 ERLFKSGRVDAIVATSSLELGVDIGYARLVVQFGSPRQAIKLAQRVGRAGHSLSEVSRGV 362 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRV 486 P D V+SAV+ ++ LE PLDVL+ Q L V + V Sbjct: 363 IVPLYLEDAVESAVLARRVYLRALEKQGFHEKPLDVLSHQVAGLVLEYRDLDVYTVHEVV 422 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 R+AP++DL L+ L V + + S Sbjct: 423 TRSAPFRDLSLGELKQLLEFLDSLG------------VVRFDGERVKMGRRTISYYYGSA 470 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD--Q 604 IP+ + V+ + A R +G LD +I LG +W ++++ D + Sbjct: 471 SMIPETLSFDVV-----DMASRRTIGALDYAFASLVDKGRVIILGGKAWTVEEVDVDANK 525 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP----WLAEEN 660 V V P W G A++ +G + + + + E Sbjct: 526 VYVVENVEEFGEPPIWTGMTLPVDAKVAREVGSLYRRIGESLGNPEELEKLRKEYAIPEK 585 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + +IEE++ G+VP R+ V E + G I LHS G + + A+ +A Sbjct: 586 AFEKLVRIIEEEKRLLGVVPSDRNAVAEVASYK-GKTAITLHSYLGTKGNNLLALLLAHA 644 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + G+ A A ++ E L+ + E V S +A F Sbjct: 645 VRGYTGSSARYFADPYRVLVVTEYEVPDQRVLESLRSGLEWSLRNLEEVVRESNSYALAF 704 Query: 781 RECAARALLMPGRT----PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVY 836 A++ ++ + PG + L ++R+R P+ E LR CL + + Sbjct: 705 SHVASKMGVVDVKKSKPEPGLMSSL-RKRMR------------GTPLDREALRTCLFEYF 751 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 DL A+E +R ++ G + SP A + Sbjct: 752 DLEAVEEFVREVSEGRRPLVFKRLPELSPLAQLIF 786 >UniRef50_A1TJ45 DEAD/H associated domain protein n=5 Tax=Comamonadaceae RepID=A1TJ45_ACIAC Length = 1014 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 228/975 (23%), Positives = 351/975 (36%), Gaps = 150/975 (15%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P SS P P W +P Q + W A+ L+ A TG+GKT A +L Sbjct: 2 PSSSSRAP-RARPLAEAWIAARGWRPFPFQREVWRALAQGRSGLLHATTGAGKTYAVWLG 60 Query: 65 ALDRLFREGGEDT--------------------------REAHKRKTSRILYISPIKALG 98 AL G +A + +L+++P++AL Sbjct: 61 ALQAFGTAGKARGKGEGGTSADLADALEAAAGRPADGRRHKAPPPEPLTVLWLTPMRALA 120 Query: 99 TDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL 158 D + L+ PL +A + G RTGDT + ER +R P +L+TTPESL Sbjct: 121 ADTLKALRTPLDELAATQ----PALARWTSGARTGDTGSAERGAQSRRLPTVLVTTPESL 176 Query: 159 YLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 L+L + ARE L V V+ DE H + G+KRG + L+L RL A + G+SAT+ Sbjct: 177 SLLLARADARELLSTVRLVVADEWHELLGNKRGVQVQLALARL-AGWNPRVCVWGMSATL 235 Query: 218 RSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277 + + L + Q+ + V + G + Sbjct: 236 GNLPEARDALLAPLGAEGAGEGVLVQGQVDKRLVVDTL--------LPDHPERFSWAGHL 287 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS 337 + ++ E+ +T+VF N R AE Y A L P A + A Sbjct: 288 GLRMLPAVVRELESTTTTLVFVNVRSQAEL-------WYKAILDARPDWAGELA------ 334 Query: 338 GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 HHGS+ + R E LK G LR VV TSSL+LG+D V+ V Sbjct: 335 ----------------IHHGSLDRGVREWVEAGLKEGRLRAVVCTSSLDLGVDFLPVERV 378 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 +Q+ + +A LQR GR+GH G S+ P +LV++A + AG +E P Sbjct: 379 LQIGSAKGIARLLQRAGRSGHAPGRPSRITLVPTHSLELVEAAAARAAVQAGEVEMRASP 438 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 P+DVL Q V A + + Y+ VRR ++DLPR V+ LD + PS Sbjct: 439 RRPVDVLVQHLVTVALGGGFEPEALYAEVRRTVAYRDLPRAVWQWCLDFVHRGGPSLAAY 498 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 ++ + E + GTI +V + G R+G ++E Sbjct: 499 PDYQRVAPDEEGIWRMPSARLARRHRANIGTIVSDASMAVQVLHGA------RLGTMEES 552 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 + D + +I V A +P W G L + + Sbjct: 553 FLSRLSPGDCFVFAGQVLEMVKIEDMTAYVRRAARGRPTVPRWAGSRMPLSTVLADFVVQ 612 Query: 638 FLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW 697 L A G + S + ++ L+E Q+ + +P L+ E R G W Sbjct: 613 QLAQAAAGRYGSPELR----------CVRPLLEVQQRWS-ALPTPGTLLAETLRTREG-W 660 Query: 698 RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF 757 + L+ GR H A A R S+ +D G+ + T+ L Sbjct: 661 HLFLYPFAGRHAHIGLASLFAWRAAQGEAGTFSIAVNDYGLEL-LSATERDWAALLPELL 719 Query: 758 EP----------------------------------------------------EKLLQI 765 ++ Sbjct: 720 RVHAAPVPEGGSDTGPPGLPAGEALAIRNTANAARAAAADSSGASVIGTGSAPQDEARHA 779 Query: 766 VREAVGSS----ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-D 820 + V +S + RFRE A A L+ PG R Q + + E+ + Y Sbjct: 780 LLHEVLASLNATEMARRRFREIARVAGLIFQSHPGERRSARQLQASSQLFFEVFRKYDAG 839 Query: 821 FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMY 880 ++ + E L D+ L +RR+ + PSPFA L+ E + Sbjct: 840 NMLLRQADEEVLSQELDVAQLLAALRRMQAQ--ALVVQPLARPSPFAFPLMVERFREKLT 897 Query: 881 QSDAPLAERRASVLS 895 D LA+R A +L+ Sbjct: 898 NED--LADRIARMLA 910 >UniRef50_A3DN94 DEAD/DEAH box helicase domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DN94_STAMF Length = 934 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 182/855 (21%), Positives = 348/855 (40%), Gaps = 117/855 (13%) Query: 26 AFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +K+ T++Q + + + ++ +++APTGSGKT AA L + ++ + G K Sbjct: 12 GYKKLTSLQIKAFKAIYKEKNSVIIVAPTGSGKTEAALLPIMYKINKHG---------YK 62 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+P++AL D++R ++ K + + +R GDTP + R + Sbjct: 63 PISAIYITPLRALNRDIKRRMEKLAK------------CFGVSINLRHGDTPYKLRKYIE 110 Query: 145 RNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 NPP IL+TTPE+ Y+++ + R+ + ++ ++IDE + SKRG L S+ L+ Sbjct: 111 TNPPHILVTTPETFNYILINDKMRKYIANLKYIVIDEFRDLIESKRGILLLTSIYLLEHY 170 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGG---DRPVTVVNPPAMRHPQIRIVVP-VANMDDVS 259 L +I L+AT+++ L + V+ ++ +++VVP + D+ Sbjct: 171 LKHKFIKIALTATLKNIRLAMEILSSSALPSNIDVLIDNTLKPIDVKVVVPECKDNDNKC 230 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 S ED I D RS +VF N+R +AEKL L Sbjct: 231 KFLSSILEDKDLIARIL-------RIYDLFRSKRSILVFVNTRSIAEKLGYLLK------ 277 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 N ++ HHGS+S+ R E+ ++G L+ + Sbjct: 278 --------------------VVNEKLGANNIHVEVHHGSLSRNHRLKVEEDFRNGRLKGL 317 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG-LFFPRTRRDLVD 438 +ATSS+ELGID+G +D VIQ +P V +QRIGR+GH++ G+S+G + +++ Sbjct: 318 IATSSMELGIDVGFIDYVIQYMSPRQVVRLVQRIGRSGHKLSGISRGEIIVQNNTLQILE 377 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPR 497 S VI G +E P PLDVLA V + + + + + + YS + ++DL Sbjct: 378 SLVIARRAINGDIEEERIPVKPLDVLAYSIVLYSLITEGINIYDLYSLLIMNPIYRDLDV 437 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 + F+ ++ L +L+ +E I + T+ IP + Sbjct: 438 KEFNDLIEYLK-----------YARLIKVKENIIKPTSRSRLFIYKTT--MIPSTKDVII 484 Query: 558 LLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRD--QVIVTP-APGR 613 + RR+G L+EE V D++ +G W++ + ++ V P Sbjct: 485 I-----NVVDDRRIGVLNEEYVVLNISEGDVVVVGGKPWKVIGYDQQNAKLYVEPYNVSE 539 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 + +P W GE +L +G + ++ L + + I Sbjct: 540 NIIIPHWEGENIPVEYKLAREVGSLIRRISLNMKIDDYKTLLLNDNIKLEGIND------ 593 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA-DASVV 732 + + +++E E+G +I++ G RV+ + I + + Sbjct: 594 -----LADDKTIIIEG-NIELG--LVIVNINGGSRVNRFMRDLLKSVIQWRYPFLKINAY 645 Query: 733 ASDDGIVARIPDTDGKLP-----DAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 ++ + + + + + + ++ R + A R Sbjct: 646 STPYAVFITLNNKQYVREVVNTIEQVMHNINRYLTRKSLKRIAVEQGTMHWRIFQVAQRF 705 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 + + ++ + L + + D + E L E L YD+ ++++L Sbjct: 706 GALD---------PEKNKITKAML----EAFVDTVIGYEALNEVLWKDYDIESIKQLADL 752 Query: 848 LNGGEIQISDVTTTT 862 + G ++I T+ Sbjct: 753 VMNGNVKIISKITSK 767 >UniRef50_B8D5X5 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5X5_DESK1 Length = 932 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 211/851 (24%), Positives = 344/851 (40%), Gaps = 122/851 (14%) Query: 26 AFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +K T +Q + + VA L++APTGSGKT AA + R+ + K Sbjct: 12 GYKSFTELQKKAFDKVAGEGRSVLILAPTGSGKTEAAVIPVFYRV---------RIERLK 62 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+P++AL D++R + ++ + L V +R GDTP + R +L Sbjct: 63 PIAAIYITPLRALNRDIERRI------------KKIASCFGLSVAVRHGDTPERARRELA 110 Query: 145 RNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 NPP +LITTPES Y+++ + R + +IIDE H + SKRG L L Sbjct: 111 DNPPHVLITTPESFAYIIVNEKLRHYIANTRYLIIDEFHEMVRSKRGLLFLTMLYLLGEY 170 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 RI LSAT+ + S+ L V V+ ++ +++V+P S Sbjct: 171 HGFKPLRIALSATLSNPSEYLKLLTPTGEDVEVIGDEYVKKMDVKVVIPGKP-----SSL 225 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 S G+DS R ILD R+ +VFTN+R LAE L + L +L Sbjct: 226 SLLGDDSVDPRLSY--------ILDAGRRYNGVLVFTNTRSLAEMLGSLLRKLIE----- 272 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 + HHGS+S+ R E K GEL +VAT Sbjct: 273 ----------------------KHGLDLKVGVHHGSLSRSHREEVEAGFKQGELNILVAT 310 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF-PRTRRDLVDSAV 441 SS+ELGID+G +D VIQ +P + +QRIGR+GH++ G+S+G+ L++S + Sbjct: 311 SSMELGIDIGHIDFVIQYLSPRQSSRLIQRIGRSGHRLKGISRGVVLSTSNLLHLLESLI 370 Query: 442 IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA--LQVDEWYSRVRRAAPWKDLPRRV 499 +V+ ++E PLDVLA ++ + DE Y R+ R A ++DL Sbjct: 371 LVDEALRSKVEREEVVFKPLDVLAYAIALLVLLNPSGVNRDELYDRLVRYALYRDLSPEE 430 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 ++ ++ + + V + G+L +L + IP V+ Sbjct: 431 YNGLIEYMVYAH------------VLRDDGGLLKPTRKTRLYVYRT-SMIPSTRDIHVV- 476 Query: 560 PEGEEKAGSRRVGELDEEMV-YESRVNDIITLGATSWRIQQITRDQ--VIVTPAPGRSAR 616 E + + +G L+EE V R +D+I L +WR+ ++ + V G A Sbjct: 477 ----EVSTGKTIGSLNEEYVILRLRPDDVIILAGEAWRVIGFDDEKGHLYVEKTKGDYAE 532 Query: 617 --LPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 +P W GE + IG+ + + + L I+ GL EE Sbjct: 533 SLIPHWEGENIPVDTRVALRIGEVIDYVKKNKSLPEELKKLLETNVEIS--WGLAEELSG 590 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA-DASVVA 733 + I +E+ +I++ G +V+ I + + D + + Sbjct: 591 YSRI----YVDYVEKM------NLLIININAGSKVNSLIRDVITYLLRQRFPIMDFTSYS 640 Query: 734 SDDGIVARI------PDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 S I+ R+ + + I L + +R V S R + A R Sbjct: 641 SPYAILVRVKGYIYPAELINAVKTIIINLGKYIDNNAFLRSVVKDSQALYWRIYQVAQRF 700 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 + + R+ S L +A D + E +E L YDL + + Sbjct: 701 GAI---------TPGETRVTKSMLNALA----DTIIGEEAFKEVLIKDYDLESARSIASL 747 Query: 848 LNGGEIQISDV 858 + GG I + Sbjct: 748 ITGGGISVETR 758 >UniRef50_Q9Y9V1 Putative ATP-dependent helicase n=1 Tax=Aeropyrum pernix RepID=Q9Y9V1_AERPE Length = 948 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 235/1024 (22%), Positives = 397/1024 (38%), Gaps = 155/1024 (15%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 S +P R+ +K +Q + + + R +ALV+APTGSGKT A Sbjct: 2 EESAVPGWVLELLREA---GYKSLLPIQEKAFPIIYRGLNALVVAPTGSGKTEA------ 52 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 +++Y++P++AL D++ ++ R Sbjct: 53 ALAPLLARLRNGRVASGGGVKVVYVTPLRALNRDLEGRVE------------RLAGLFGY 100 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVA 185 V +R GDT R + PPDI+ITTPESL L+LT RA+E L+ V++DE+H + Sbjct: 101 TVQVRHGDTVQSSRRRFLERPPDIVITTPESLALLLTVKRAKEVLKQARAVVVDEIHELM 160 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVR--SASDVAAFLGGDRPVTVVNPPAMRH 243 SKRG L+L+LE+L+ + QRIGLSATV S A+ LG R V++V + + Sbjct: 161 ESKRGVELSLNLEKLELMAGRRLQRIGLSATVSRHSLYRAASLLGAGRHVSMVLDTSPKE 220 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL-RHRSTIVFTNSR 302 +R+VV G EG W I + V S ++F N+R Sbjct: 221 YDVRVVV--------------------VGDEGRFWENSVKAIAELVKGEGGSVLIFANTR 260 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 E L L+ +HHGS+S+ Sbjct: 261 STVETLAFALSRELGEE--------------------------------VPAHHGSLSRH 288 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 R E+ K G ++ +VATSSLELGID+G V LV+Q +P V + +QR GR+GH+ G Sbjct: 289 VRERVERDFKEGRVKAIVATSSLELGIDVGRVALVVQFLSPRQVTAMVQRAGRSGHRFGE 348 Query: 423 VSKGLFFPRTR-RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVD 480 S+ + ++++S VI G LE+++ P P D LA AA + ++ Sbjct: 349 RSRAVIVTIDNVFEVLESHVIAFRAMKGDLEDISIPKKPYDALAHFMAGAAIDSEPPTLE 408 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 Y AP++DL + +LS +++ G L R Sbjct: 409 GVYKLAVSTAPYEDLKMEEVEEIARVLSD-----------VRVIRLGPGGKL-GRSSRTY 456 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM-------VYESRVNDIITLGAT 593 IPD + V + R VGE+ E + R I LG Sbjct: 457 SYFYRVSMIPDEKTFKVH-----DVVSGRDVGEVGERFIQLRLMKASDPRSKPYIVLGGK 511 Query: 594 SWRIQQ--ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL-LADGAFFSG 650 W+I + I +V+V+P +P W GE ++ + + L + D + Sbjct: 512 VWKILEVDIDAGKVLVSPEGEVEGAIPAWEGELIPVDFKVAREVCSIMSLAMNDMEAGAR 571 Query: 651 TIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVH 710 + +E + + ++ E G V R V+E IL++ G R + Sbjct: 572 LLRARRLDEKAMERVLDVLGETGRLWGTVLSWRRPVVEEAEGLA-----ILYACLGSRGN 626 Query: 711 EPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL-----PDAAIFLFEPEKLLQI 765 ++ ++ + + + IV + P + G + EP + L + Sbjct: 627 FALSLLLSKLMEGSVAVEFHYI--PYAIVFKSPASRGLGRLVAHSLKTLAKLEPAERLGM 684 Query: 766 VREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVIL 825 + +AV S + RF + A R ++ L + ++A PV + Sbjct: 685 LYDAVRRSRAYLVRFYQVAKRMGVVD----------PDATLSLDIIRKMADAMQGTPVDI 734 Query: 826 ETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 ET++E + + D+ AL R + ++ ++ V SP A L ++ Sbjct: 735 ETVKELVHEKLDIDALNRFLDDVSD----VAVVELQRLSPLARETL---TNPYL------ 781 Query: 886 LAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLL 945 R + +SL + L ++ + L + +++ L + E+ + +L Sbjct: 782 ---RVDAAVSLKTLGLDKII-EAKKRRLSEKRIV--------FLCISCDKRHEKKVAELP 829 Query: 946 RELGPMTV--EDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDA 1003 R LA +E E ++ + +++ ARL + Sbjct: 830 RGTAYRCPYCGSLALAPLPPTETGERLAEAYTRKRKGAKLSREEAKLAREVEERARLYIS 889 Query: 1004 LGVR 1007 L V Sbjct: 890 LAVE 893 >UniRef50_A2BLG2 ATP dependent helicase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLG2_HYPBU Length = 959 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 208/858 (24%), Positives = 342/858 (39%), Gaps = 130/858 (15%) Query: 14 VFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + R+ R +++ T +Q + + ++APTG GKT AA L L R+ E Sbjct: 20 LLHEKVRELIRLRGWRELTEIQEKAIKPILEGHNVFIVAPTGYGKTEAALLPILSRMLEE 79 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E LYI+P++AL D+ + + V + Sbjct: 80 RVEPVAL---------LYITPLRALINDIYERISW------------WASRFGFIVARKH 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRG 190 GD P ER++ R+ P IL+TTPESL + L + R+ R + VI+DEVH + +KRG Sbjct: 119 GDVPHSERTRRLRHAPHILVTTPESLEIDLDWAPKFRQYYRNLRWVIVDEVHEIVSNKRG 178 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRI 248 LA+ LER + Q I +SAT+ + A G RP+TVV+ + +I + Sbjct: 179 VQLAVLLERFRRIAG-DFQLIMISATIGEPTIAARAFTGSSRRPLTVVSVEKRKPIEIVV 237 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 D V + ++ + + P T+VF NS+ AEKL Sbjct: 238 -------DYVEAPSTKFWRAAAEKLVKHMEPL--------------TLVFVNSKHAAEKL 276 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 + + V HH S+ E+R E Sbjct: 277 HGEIERM--------------------------------GVEGVVVHHASIHGEERRRIE 304 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + K G+L ++AT +LELGID+G++ VI SV+S LQR+GR+GH + G G+ Sbjct: 305 KMAKEGKLNMIIATKTLELGIDIGSIRKVILFRPAGSVSSLLQRLGRSGHTIAGKISGIV 364 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 +L+++ G++E P PLD++A+ + A V++ Y + + Sbjct: 365 LATDPLELLEAIAEARLAAKGKVEVPELPVKPLDMVARAILGMALSGEYTVNDMYDILSK 424 Query: 489 AAPWKDLPRRVFDATLDMLSG----RYPSGDFSAFRPK--LVWNRETGILTARPGAQLLA 542 ++ L R FD +D L + + + P+ +W + G Q + Sbjct: 425 VYYFRGLTRSEFDELIDYLKNAKMIKINNDGKVSCGPQFYKIWRFDAGDSKYSWWVQNFS 484 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQIT 601 TI +R Y+V +G R VGELD + V + RV +I LG +W++ I Sbjct: 485 -QFFTTIGERRAYTVRTVDG------RVVGELDTDFVVKVLRVGHVIRLGGRNWQVIGID 537 Query: 602 R--DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWL-AE 658 +V+V +PFW+G+G + I + ++ + IP + Sbjct: 538 EHNGKVVVAETEQSITAIPFWKGKGPELSRLV---IAELEKVIQETHRGQLNIPSSVKLT 594 Query: 659 ENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA 718 E+ A + G+I E R P +++E+ DE D ++L RV A + Sbjct: 595 ESAAAVLNGIIGEVRKYRYPAPARNKVIVEKLADE--DVYVVLAP---ERVVRTLAYLVM 649 Query: 719 GRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 + +D V + G + P + E+ + +REAV S FA Sbjct: 650 LEAYRS-SSDVYVKLNHYGFAVP-SHSIAFNPLKFLVSLTREEFEERLREAVTRSPYFAE 707 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 E L+ R+ D E R+ LQ+ +D Sbjct: 708 ---EAHNIQLVFGVTRKIKRS--------------------DGVAFEEIARQTLQNYFDP 744 Query: 839 PALERLMRRLNGGEIQIS 856 A L++ + G I+I Sbjct: 745 EAAWELIQGIREGRIKIV 762 >UniRef50_C5RNG9 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=C5RNG9_CLOCL Length = 722 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 176/801 (21%), Positives = 295/801 (36%), Gaps = 131/801 (16%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLF 70 + ++P +++ + + + VQ + + ++ H ++ + T SGKT AAF L L+ Sbjct: 7 ERYAPFIQEYIYQKNWTDLREVQVEACNEILDTDDHVIIASGTASGKTEAAFFPILTTLY 66 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + ++YI P+KAL D L L+ E + V Sbjct: 67 NQPSNSVG---------VMYIGPLKALINDQFERLSELLE------------ESYIPVWP 105 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGS 187 GD + + + IL TPESL +L A+ + V+IDE+HA G+ Sbjct: 106 WHGDISQSIKKRALKEAKGILQITPESLEALLMRHPGDAKRLFSDLRFVVIDEIHAFMGT 165 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG + L RL+ + +RIGLSAT+ FL V RH + Sbjct: 166 DRGLQVLCLLSRLEKITDCYPRRIGLSATLNDYEPAQHFLASGTRRGVKVVGIKRHARTI 225 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + V S E + Y E L + + ++FTNSRG AEK Sbjct: 226 SLC----------VESFQLPKEPLKAENIVKEYNE--FLYQNSHKKKCLIFTNSRGGAEK 273 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L + AR Q +DVF HHGS+S R Sbjct: 274 VITDLKNIAYAR-------------------------QETDVFFV--HHGSISAALRREA 306 Query: 368 EQALKSGE-LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG----- 421 E AL+ E AT +LELGID+G +D IQ+ P S +S +QR+GR+G + G Sbjct: 307 ETALRDAEGATVTAATLTLELGIDIGDLDSTIQIGAPYSCSSFVQRLGRSGRRTGKSQML 366 Query: 422 -----GVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTVAAAAMD 475 S F R +L+ + I++ +E P ++A QT++ Sbjct: 367 FVNIFEESDKNLFERLPWELLRAIAIIQLYLEERWVEPFYMKEKPFSLVAHQTLSVLMS- 425 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA- 534 + +L + +L S +R L + E L Sbjct: 426 ----------------YGELSPPELARNVLLLPAFRNSISQDEYREILQYMLENDYLQKV 469 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR--RVGELDEEMVYESRVNDIITLGA 592 G ++ + + Y+V E S+ +G LD + + L Sbjct: 470 ENGGIIVGIKGERIVNHYSFYAVFQDEQVFHVHSQEGEIGTLDN----CPAIGEAFVLAG 525 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 WR+ ++ ++ I+ +++R+P W G G ++ I L ++ S Sbjct: 526 NMWRVLELDENRKIIYVRSIKNSRIPIWNGSGGHIHTKVVHRIRRILTENVRYSYLSPNA 585 Query: 653 PPWLAEENTIANIQGLIEEQ-----RNATGIVP--------GSRHLVLERCRDEIGDWRI 699 L E A G++E N+ + P + L+ +D + + + Sbjct: 586 SEVLEEARKTAKNSGMLENNVIPYSANSFYLCPWVGSKEMKTIKRLLSYGLKDFLQIYSV 645 Query: 700 ILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVA------RIPDTDGKLPDAA 753 S Y + V + ++H SV +D +V +I DG +PD Sbjct: 646 SGGSHYLQITSGLSVVEVVNKLHE-----LSVDCDNDNMVLTEKQAPKIDKYDGMVPDNL 700 Query: 754 IF------LFEPEKLLQIVRE 768 + E ++I+RE Sbjct: 701 LRKAFLHNELNVESAVKILRE 721 >UniRef50_C5CE86 DEAD/DEAH box helicase domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CE86_KOSOT Length = 716 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 166/753 (22%), Positives = 292/753 (38%), Gaps = 128/753 (16%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 +K TA+Q + ++ L+IA T SGKT AA + L ++ + G K Sbjct: 17 GWKSLTAIQKKAIPEIISGKNVLIIAGTASGKTEAAMIPILQKMSKNRG---------KG 67 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 +Y +P+KAL D+ + L+ + + VG GD ++ + Sbjct: 68 IICIYFAPLKALINDIAQRLKGIFE------------RFDFYVGKWHGDVSQSDKIYALK 115 Query: 146 NPPDILITTPESLYLMLTSR--ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 IL+TTPES+ +LTS+ + E + V+IDEVH A + RGA L +ERL + Sbjct: 116 E-AKILVTTPESMEGLLTSKKFSPEIFSDLRFVVIDEVHNFANNPRGAQLMSLIERLQII 174 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 QR+ +SATV + + ++ G +R V+ + +I V +++ Sbjct: 175 SRNEIQRVAMSATVGNPEKLLQWITGCSERESVVIETNSASRREIN----VRKEEEIE-- 228 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 + + + + ++ I+F +SR E T +L + L Sbjct: 229 -------------------LSDLVKNLLSENKKIIIFADSRKEVEHYTRKLLDSGIEAL- 268 Query: 322 RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK-SGELRCVV 380 HH SVSK R E+A K + + ++ Sbjct: 269 --------------------------------PHHSSVSKTIRESIEKAFKANDKSCVII 296 Query: 381 ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSA 440 ATS+LELGID+G VD VI + P S +S LQRIGR+G + +SK DL+ Sbjct: 297 ATSTLELGIDVGNVDTVIFLNVPYSTSSFLQRIGRSGRKS-KISKAWILIPREEDLIRFL 355 Query: 441 VIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF 500 I + G +E + P + A Q +A + E ++ A+P+K++ + F Sbjct: 356 GIATMLQDGEVEKVRPLWYYPQLFAHQIIALTYEKQKLLIEHLKVLKNASPFKEIKKDDF 415 Query: 501 DATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLP 560 + D L + L N E ++ PG++ L + G + + VL P Sbjct: 416 ELLRDHLLNK----------HYLELNSENYLV---PGSETLEIMESGY--KKKNFVVLFP 460 Query: 561 EGEEK---AGSRRVGELDEEMVYES-----RVN-DIITLGATSWRIQQITRDQVIVTPAP 611 + +G L + + +L +WR+++I + + P Sbjct: 461 TTVDFIVYHKGVEIGTLHPIFAQTLQESFQKEGYAVFSLAKENWRVEKIDTRKRKIDVVP 520 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI-ANIQGLIE 670 +++P W G+ + + I A S IP + TI + + L++ Sbjct: 521 TNESQIPKWMSFGSKMDFDFAQAIRK--------ALISQEIPKNVNVSETIKSELLDLMD 572 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL-----W 725 ++N V R+LV + + I + + +G + + I Sbjct: 573 VEKN---TVATDRYLVTSQLATP-NMYEIDVFTYFGNQGNLLLKYLIKMLGIEKIKINWR 628 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFE 758 + S D I+A + + K + L Sbjct: 629 SINIKSEKSIDRILAGLKELISKPDSEILDLLT 661 >UniRef50_C4FYH2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYH2_ABIDE Length = 721 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 142/635 (22%), Positives = 246/635 (38%), Gaps = 107/635 (16%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLF 70 + +P +D+ R +++ +Q + ++ + L+ PT SGKT AAFL + +L+ Sbjct: 5 EKLAPFVQDYIYRNGWEELREIQVAACDIIFNTDHNLLIATPTASGKTEAAFLPVITKLY 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + K+ +LYI+P+KAL D ++ L+ E + V Sbjct: 65 NKPS---------KSVGVLYIAPLKALINDQFSRIEELLE------------EAYIPVTK 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGS 187 GD +++L +NP IL TTPESL M+ R + + +IIDEVH G Sbjct: 104 WHGDVSVNMKNRLLKNPSGILQTTPESLEAMIMKRKEQAVKLFSDLRYIIIDEVHNFIGE 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 +RG L LERL L +RIGLSAT+ +L G V P + Sbjct: 164 ERGTQLISLLERLSKLTGIVPRRIGLSATLGDIEGTEKWLSGGTGRLCVTPETGIKKRKA 223 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 +V+ +D E + + + R + +I+F+NSR E+ Sbjct: 224 MVM-------AEHFYEFPLQDEKHKNENLFFESLYN-----LTRGKKSIIFSNSRAEVER 271 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L ++ + + + + HHGS+S R Sbjct: 272 NIVNLKDIASKKGEPD---------------------------VFMVHHGSISASDREYV 304 Query: 368 EQALKSGELRCVV-ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E+ ++ + V AT +LELGID+G ++ ++QV P SVAS QR+GR+G + G Sbjct: 305 EEQMRLSNMPLVAGATVTLELGIDLGDLERIVQVGCPKSVASLSQRLGRSGRRSGVSEMC 364 Query: 427 LFFPRTR------------RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 F + V ++E R+E + P + P +L QT++ Sbjct: 365 FLFDEDKQSESSEFYKLVNWSFVKCIALIELYRENRIEPVLPENYPFGILYHQTMSYLYG 424 Query: 475 -DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 ++ D + + + + + L + + I Sbjct: 425 RGEIKPDLLAQNLLSEYVFSHISKEDYRELLCFML------------------KTGQIEK 466 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYESRVNDIITLG 591 G ++ + + YSV + E + GS +G L M + + LG Sbjct: 467 TETGGLIIGLEGEKIVNHYDFYSVFESDVEYSVREGSHEIGTLTRLM----QPDTTFVLG 522 Query: 592 ATSWRIQQITRD--QVIVTPAPGRSARLPFWRGEG 624 +W + + ++ + V A G+ + W G G Sbjct: 523 GKTWLVTETDKENKTIYVEKAKGKPPTV--WDGTG 555 >UniRef50_B2A401 DEAD/DEAH box helicase domain protein n=6 Tax=Firmicutes RepID=B2A401_NATTJ Length = 711 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 173/776 (22%), Positives = 308/776 (39%), Gaps = 130/776 (16%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 + + + + T VQ +T + + + +V + T SGKT A FL L ++ ++ Sbjct: 14 KKIWEMGWDEFTPVQDKTIPIVMNTNKDVVVSSGTASGKTEAVFLPILSQIEKDA----- 68 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 K +ILYISP+KAL D + + + + + GD Sbjct: 69 ----TKDLKILYISPLKALINDQFERIIKLCE------------KSYIPIHRWHGDVNQN 112 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLAL 195 ++ +LT+NP IL TPES+ + +R E L +E +IIDE+HA ++RG HL Sbjct: 113 KKKQLTKNPAGILQITPESIESLFINRTNELNYILSDIEFIIIDELHAFLDNERGVHLRS 172 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIRIVVPVA 253 L RL+ + + LSAT+ + + ++ + + V +++ Sbjct: 173 LLSRLENYIKEKPRYFALSATLNNFKLIKEWINYNDIKNVEIIDS--------------- 217 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 N DD + S D + I Y + L E+ ++ +++F NSR E+ T LN Sbjct: 218 NEDDKDLLLSLMHFDKGKDYKKPIDLYQD---LRELTKNVHSLIFCNSRAEVEETTLYLN 274 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 L + + +HH S+ K++R E+ + + Sbjct: 275 RLANREVNTE---------------------------LYLAHHSSIDKKEREYVEKTMAN 307 Query: 374 GE-LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 + + VV TSSLELGID+GA+D V+Q+ +V+S QR+GR+G ++G + T Sbjct: 308 SKSPKSVVTTSSLELGIDIGAIDYVVQIDDTHTVSSLKQRLGRSGRKLGTNQVLQVYSTT 367 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAP 491 LV S +++ + +E T PLD+L Q ++ + +++D ++ A Sbjct: 368 NDSLVQSLAVIDLLLEKWIEPATEYPLPLDILFHQIISICHEANGVRLDPLIDNIKANAA 427 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL-AVTSGGTIP 550 + L + ++ + DF R A+L+ + + Sbjct: 428 FYKLKEEDINHVINYMI----ENDFLQLI--------------RNSAELIVGLEGERLLR 469 Query: 551 DRGMYSVLL--PEGEEKAGSRRVGELDEE-MVYESRVNDIITLGATSWRIQQITRDQVIV 607 + Y+V + E E + G R++G +D+ MV E D I L W I+ I ++ I+ Sbjct: 470 GKEFYAVFMTQEEFEVREGIRKIGSIDKSLMVSE---GDNIILAGQLWTIKNIDIERDII 526 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQG 667 A + P + G G ++ E + L + F L Sbjct: 527 YVAKAVDGKPPKYSGGGFILNPKIPERMHKILCERKNFEFIDNMAQNHL----------- 575 Query: 668 LIEEQR---NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 EEQR I P ER GD I+ + G ++ + A + Sbjct: 576 --EEQRKPFELYNIKPN------ERVIWNNGD-EILFETYTGTKIFQTLAWIL-----RS 621 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + + DGI + LP + E + + + + F ++F Sbjct: 622 YNVNIK---EIDGIGRINIEGGIDLPGVLQDIKETDWRPEYLLDFTLEQEKFKSKF 674 >UniRef50_O26412 ATP-dependent helicase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26412_METTH Length = 702 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 171/775 (22%), Positives = 284/775 (36%), Gaps = 137/775 (17%) Query: 13 DVFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 + +P R + ++ VQ R E L++APT SGKT AA + + + Sbjct: 4 ESLNPRLRHFLANRLGWRSLRDVQKSALEAIGRGEDTLIVAPTASGKTEAALIPVFNSIL 63 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 EG +LY+SP+KAL D+ L+ NL V Sbjct: 64 SEG---------LPPVSMLYVSPLKALINDMHSRLE------------LWGNHFNLEVMK 102 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR----ETLRGVETVIIDEVHAVAG 186 GD PA + + +NP DIL+ TPESL +M+ +R+R L + +I+DE+H Sbjct: 103 WHGDVPANRKRRFIKNPSDILLITPESLEVMMINRSRAEKERILGNLRYIIVDEIHQFIE 162 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 + RG L L RL+ QRIGLSATV + +V ++ VV A R Q Sbjct: 163 ADRGVQLNSLLARLERYTGVRPQRIGLSATVGNPEEVLNWMSPS--GAVVRDTAERKLQY 220 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR--HRSTIVFTNSRGL 304 R I+ +++ + R + ++F SR Sbjct: 221 R-----------------------------IFELNHHKLIEVLRRFTGKKVLIFVPSRRD 251 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AEK + + HH S++++ R Sbjct: 252 AEKYYNIIRK--------------------------------CLDVDVFIHHSSINRDSR 279 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E+ +S +V TS+LELGID+G +D+VI + +P SV LQR G Sbjct: 280 EEAEERFRSVSAAFMVNTSTLELGIDVGDIDVVIHIRSPTSVNRFLQRT---GRSGRRRG 336 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWY 483 ++ + + + +GRLE+L P PLD+ Q +++ ++ + Y Sbjct: 337 LQRTIIFQEKEALTALSVASLALSGRLEDLRIPVRPLDIYFHQILSSVFELEKPTPGDIY 396 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 + RA + DL F ++ + DF + + Sbjct: 397 RGLGRAHVFSDLDADDFRHLVEFM----VENDFLRVHGPYIHH------------GFNFE 440 Query: 544 TSGGTIPDRGMYSVLLPEGE--EKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQI 600 + G + Y+V P E K ++ +G LD V +V LG W ++ I Sbjct: 441 KTFGKMNFLEFYTVFPPNYEFTVKHRTKVIGSLDSFFVVTYLKVGRGFILGGEKWVVKDI 500 Query: 601 TRDQVIVTPAP-GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 ++ IV P R A +P W G E+ + D L D P A Sbjct: 501 DHERFIVRVKPCTRDAEIPDWSSGGAPTTFEVARHVYDILLGDFDRGLLRWLDPGSQARV 560 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA----- 714 + E +A G+ G + + RI +++ G RV+ + Sbjct: 561 QSCM-------EMASAEGLDHGMIPVRI--------GERIEINTFAGERVNALISDVFRL 605 Query: 715 -VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVRE 768 + G ++ + + S I + + D + + L + L + V+ Sbjct: 606 EHGVHGISNSAFTSSFSARLDYHDIESTLRDIPAIISEEDFLLRLEDNLDRFVKN 660 >UniRef50_A1BIJ8 DEAD/DEAH box helicase domain protein n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BIJ8_CHLPD Length = 710 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 154/744 (20%), Positives = 278/744 (37%), Gaps = 120/744 (16%) Query: 13 DVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAP-TGSGKTLAAFLYALDRLF 70 D+ S R + + ++Q +Q S+ ++A T SGKT AAFL L ++ Sbjct: 4 DLLSEPIRKFIRDKGWEQLRPIQTAAIAKILASDDNFILASRTASGKTEAAFLPILSKV- 62 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 ++LYISP+ AL D ++ K + ++ V Sbjct: 63 ---------DFNDSGVQVLYISPLIALINDQFYRIEELCKNL------------DVTVTK 101 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGS 187 G+ + +L + P I++ TPESL M ++ ++ ++ V+IDEVH+ G+ Sbjct: 102 WHGEANKTLKDRLIKQPTGIVLITPESLEAMFVNKPFNVKKLFSNLKYVVIDEVHSFIGT 161 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG L L RL + S +GLSAT+ ++ F+G ++ V+ + Sbjct: 162 DRGTQLKSILSRLQRVNSQSFSIVGLSATIGDYNEAKKFIGNEKNTKVLLDRTAKEIN-- 219 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 S E E YIET + ++F NSRG AE+ Sbjct: 220 -----------SVFRFFKKEKEELPLELLKDLYIET-------KDNKVLIFPNSRGRAEE 261 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + +L ++ S RV+ + SHH SV +E R Sbjct: 262 VAVKLKKI-------------------------SERVKGHPHYF--SHHSSVDREVREYV 294 Query: 368 EQALKSGELR--CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E K+ + C+ TS+LELGID+G+VD V+Q+ S+AS +QR+GR+G + G S Sbjct: 295 EYFAKNNKRHNFCISCTSTLELGIDIGSVDEVVQIDATHSIASLIQRVGRSGRKDGESSN 354 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYS 484 + T+ L+ S +E P D+L Q ++ + + + E Sbjct: 355 LFLYATTQWSLLQSIACWLLYNESFIEPPEKNEKPYDILVHQALSITKSHSGILLTELIK 414 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 +++ + + + + + L L E L ++ V Sbjct: 415 QLKENSAFNSIEQSEVEEILQNLI-------------------EIDFLEKLQREVIVGVQ 455 Query: 545 SGGTIPDRGMYSVLLPEGEEKA--GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 + R YSV E K +GE+ + ++ I L A W+I + Sbjct: 456 GEKVVNSREFYSVFKTEENFKVVNAGNTIGEIP--FSPQIIEDENILLSAKIWKITFVDH 513 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 + P + + P + G G ++ E + + L+ + F + Sbjct: 514 KAKKIEVIPAKDGKKPIFFGGGAILHQKIREKMFEILYSKTEYDFLDEPSFEEIEMMRKD 573 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 ++ + + Q R L+ + + L + G R++ + + Sbjct: 574 FSVFNIKDLQ--------SERPLL-------TAEKHLQLFTFTGTRINRTLQLLL----- 613 Query: 723 ALWGADASVVASDDGIVARIPDTD 746 + G ++ S+ +P D Sbjct: 614 NIAGIKNTLDDSNSSFNIEVPKED 637 >UniRef50_D2BWD9 DEAD/DEAH box helicase domain protein n=6 Tax=Gammaproteobacteria RepID=D2BWD9_DICD5 Length = 732 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 156/734 (21%), Positives = 258/734 (35%), Gaps = 118/734 (16%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D P R W + + + +Q V AR + L+ A T +GKT A FL A + Sbjct: 6 DSLDPRVRKWVYKQGWSTLRPLQESAIPIVLARDQDVLISAGTAAGKTEAFFLPACSAI- 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + I+YISP+KAL D R L+ +++ V Sbjct: 65 ---------SDITGGFGIIYISPLKALINDQYRRLESL------------GEVLDMPVTP 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGS 187 GD P ++ K+ +P IL+ TPESL +L + + ++ V ++IDE HA G+ Sbjct: 104 WHGDVPQSKKKKIRTDPAGILLITPESLESLLINSSGWIKQAFSPVAYIVIDEFHAFIGT 163 Query: 188 KRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDR--PVTVVNPPAMR 242 +RG L L R+D +L R+ LSAT+ V L D+ P +V Sbjct: 164 ERGMQLLSLLNRIDHVLGRHANPVPRVALSATLGELDKVPELLRPDQRLPCKIVTDSN-- 221 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 + GE+ + E + I R S +VF NSR Sbjct: 222 ----NTATLQVQVKGYQVPVPEKGEEPQSSAEKHVCADIFRLC-----RGDSHLVFANSR 272 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 E + A L+++ + + HHGS+S+E Sbjct: 273 KRTESIAATLSDICEENVVPNEFF---------------------------PHHGSLSRE 305 Query: 363 QRAITEQALKSGELRCV-VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 R E L+ G L V T +LELGID+G V VIQV P SV+S QR+GR+G + Sbjct: 306 LRETLEARLQQGNLPTTAVCTMTLELGIDIGKVQSVIQVTPPHSVSSLRQRMGRSGRRDS 365 Query: 422 ------------GVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQT 468 + R R LV S ++ M E L Q Sbjct: 366 PSVLRMLISEQELTATSGIVDRLRLQLVQSMAMIRLMITKRWFEPADARQMHYSTLLHQI 425 Query: 469 VAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR 527 +A A ++ D+ +S++ + P++++ F L + G ++ Sbjct: 426 LAITAQWGGVRADQLWSQLCQTGPFRNIDLTDFKTLLRHMGGNGLLTQLAS--------- 476 Query: 528 ETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVN 585 G ++ Y+V E + GSR +G + + + Sbjct: 477 ---------GEMVIGAEGEKLTNHYTFYAVFNTPEEFRIVTGSRTLGTVPVD--SPLLPD 525 Query: 586 DIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG 645 I G W++ +I ++ ++ + + P + G G + + + Sbjct: 526 QHIIFGGRRWKVTEIEVEKKVIYVEATKGGQPPQFSGGGMSVHDVVRQEMLAIYRENDYR 585 Query: 646 AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY 705 + A +GL E ++ R + G +L Sbjct: 586 IAIGSKRVDY-----ADATARGLFAEGCDSF-----KRFNLQNSHFISDGQHSYVL-PWM 634 Query: 706 GRRVHEPWAVAIAG 719 G +V + Sbjct: 635 GDKVVNTITALLMR 648 >UniRef50_Q2SGL4 Lhr-like helicase n=5 Tax=Bacteria RepID=Q2SGL4_HAHCH Length = 699 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 188/824 (22%), Positives = 303/824 (36%), Gaps = 153/824 (18%) Query: 13 DVFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D PA + + + +Q T EHA+++APT GKT AA R+ Sbjct: 5 DRLHPAIQHHIVNSLGWPGLRPLQEATIEPVLNGEHAILLAPTAGGKTEAASFPIFSRML 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 E + +LYI PIKAL +++ L + RVG+ Sbjct: 65 TENWQ---------GLSVLYICPIKALLNNLEERLSYY------------GHLLGRRVGV 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGS 187 GD ++K+ +PPD+L+TTPES+ +ML S R G+ VIIDE HA AG Sbjct: 104 WHGDISTSVKNKILADPPDLLLTTPESIEVMLVSNRMDHRHLFEGLRAVIIDEAHAFAGD 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQ 245 RG HL LERL L QR+GLSATV + + +L G P +V+NPPA Sbjct: 164 DRGWHLLAVLERLSYLTGRELQRLGLSATVGNPETLCDWLAGSCPSPRSVINPPAP---- 219 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 VVP +D V SV + ++ + R +VF +SR Sbjct: 220 -NTVVPEIQVDWVGSVRNAAV------------------VISRLHRGEKRLVFVDSRSRV 260 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E+L L L H +S ++R Sbjct: 261 EELAVELRNLSVTTYVS---------------------------------HSCLSLDERR 287 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 + E+A G +VATS+LELGID+G +D VIQ+ P +V+S LQRIGR G + G Sbjct: 288 MAEEAFAQGSDCVIVATSTLELGIDVGNLDRVIQIDAPFTVSSFLQRIGRTGRRAGSSRN 347 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD-ALQVDEWYS 484 LF + + + ++ AG +E + PP PL + QQ +A + + + Sbjct: 348 CLFLATKQDAFLRAIALLRLWEAGYVEPIEPPPLPLHIYCQQVMALVLQEKGIAEADLSK 407 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT-ARPGAQLLAV 543 + R + + + + + + + ++GI+ G ++ Sbjct: 408 WIGRMPGFTQFSVSDRSSLVSYML------------ERSILHSDSGIIGIGDSGERIFGQ 455 Query: 544 TSGGTIPDRGMYSVLL--PEGEEKAGSRRVGELDE-EMVYESRVNDIITLGATSWRIQQI 600 + ++SV P + G + +GE+ + + +TLG SW + I Sbjct: 456 KNF-----LELFSVFTSPPMVKVFNGKQELGEVHQLTFATKEDGPACLTLGGKSWVTKYI 510 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 + P W G E+ + I L S I PWL+ Sbjct: 511 DWARKKAFVEPTDIKGRSQWLSMGQPLQFEMCQSIQRVL--------ASDDIDPWLSNRA 562 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 L+E + V + L + +D W + GR + + + Sbjct: 563 AA-----LLESLKQEFDWVENGKTL-ITYTKDNATWW-----TFGGRLFNSTASHLFSSE 611 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS-----AL 775 + + +V I + + + L+Q +R + S A+ Sbjct: 612 SDQVKSDNLAV--------------------EFIGVIDRDNLIQRIRSFLAESFEQLPAI 651 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP 819 RF E + + R ++ E + Sbjct: 652 LDERFVEELKFSECLSQEFADKELSC---RFDVKKVFEAIRNMD 692 >UniRef50_Q24ZT1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZT1_DESHY Length = 720 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 173/733 (23%), Positives = 289/733 (39%), Gaps = 128/733 (17%) Query: 15 FSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFRE 72 +P +++ + + + AVQ + V SE H L+ A T SGKT AAFL + L Sbjct: 9 LAPFIQEYIYKHQWTELRAVQVEACRVIFESESHLLLAAGTASGKTEAAFLPVITLLHES 68 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + LYI P+KAL D L L+ E +L V Sbjct: 69 PPL---------SISALYIGPLKALINDQFARLSDLLE------------EAHLPVWHWH 107 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSKR 189 GD ++K+ +NP IL TPESL ML +R+ + LR + ++IDEVHA G+ R Sbjct: 108 GDVSPSHKNKMLKNPQGILQITPESLESMLINRSTDILRLFADLRFIVIDEVHAFMGTDR 167 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAMRHPQIRI 248 G+ + LERL ++ +RIGLSAT+ + +L G T+ + ++R+ Sbjct: 168 GSQILCQLERLTRMIGHQPRRIGLSATLGDYAIAEKWLSSGTEKRTITPKVQVGQQKVRL 227 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 V +D+ ++ + + + ++R ++FTN+R AE Sbjct: 228 AVEHFYLDEEKKMS------------------LYDQYIFDQSKNRKCLIFTNNREQAEYT 269 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 A L +L A +R P + HHGS+S R E Sbjct: 270 VATLRQL--AEGKRMPDV-------------------------YHVHHGSISAPLREAAE 302 Query: 369 QALKSG-ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 +A+K E AT +LELGID+G ++ +IQ+ TP SV+S +QR+GR+G + G S+ Sbjct: 303 KAMKESPEPCVTAATITLELGIDLGYLERIIQLETPFSVSSFVQRLGRSGRR-GTPSEMW 361 Query: 428 FFPRTRRD------------LVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTVA-AAA 473 + + L+ + I++ +E ++P H P +L QT++ AA Sbjct: 362 LVCKEDEEVNDLLPNQLPWSLLQAIAIIQLYLEERWIEPVSPKHYPFSLLYHQTMSTLAA 421 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 M L RV +P+K++ F L L + E G+L Sbjct: 422 MGELVPAALAQRVLTLSPFKNISSEDFRRLLLYLIE----------IDHIEQTEERGLLV 471 Query: 534 ARPGAQLLA-VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 G Q++ PD ++V + S+ +G + + + L Sbjct: 472 GLTGEQVVRNFRFYSVFPDNEEFTV-------RDESKEIGSI----LSPPPKGERFALAG 520 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 +W + +I + V P + W G G + + + + L ++ Sbjct: 521 RTWEVMEIELKRRTVYARPVKGKVRTTWNGGGGSIHSRILQRMKQVLEEDIIYSYLQPGA 580 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 L E +A G+++ T I+P +G L G + Sbjct: 581 VKRLCEARNLARAAGILK-----TNILP-------------LGGNSYCLFPWLGTVAYRT 622 Query: 713 WAVAIAGRIHALW 725 + R L+ Sbjct: 623 LERCLRYRGADLY 635 >UniRef50_A1RZW9 DEAD/DEAH box helicase domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZW9_THEPD Length = 854 Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 217/889 (24%), Positives = 331/889 (37%), Gaps = 154/889 (17%) Query: 14 VFSPATRDWFL---RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 PA R R ++PT +Q R E+ L++APTGSGKT AFL L L Sbjct: 58 ALHPAVRKAIRGRERELREPTPIQVLGIPRILRGENVLLVAPTGSGKTECAFLPVLHFLA 117 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 E E +LYI+P++AL +DV R L+ + R VG+ Sbjct: 118 AEREAGRLE----PGVYVLYITPLRALCSDVARRLRSYV---------RSALGDGYLVGV 164 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLT--SRARETLRGVETVIIDEVHAVAGSK 188 D E++KL PP +L+TTPESL +L R R+ L + VI+DEVH +A SK Sbjct: 165 WHADIKKNEKTKLAEKPPLVLVTTPESLEAILDTKHRFRKHLAKLRWVIVDEVHELAESK 224 Query: 189 RGAHLALSLERLDALLH-TSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQI 246 RG HL + LERL A QRI +SATV +A GG D V VV P +R Sbjct: 225 RGLHLLVLLERLKATFGIPRLQRILISATVGDPRRIARLFGGSDGKVRVVRDPGLRRIDA 284 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 +V+ R G + + + + + +VF N+R Sbjct: 285 EVVL----------------------RRGRSAEELVDALEELMGKGSGYLVFVNTR---- 318 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 S + ++ + HHGS+ +R Sbjct: 319 ----------------------------SEAEELHAELEKRGLGDILVHHGSMGASKRRE 350 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E+ K E++ VV T +LELGID+G+V+ V QV +P A QR+GRA H+ G ++G Sbjct: 351 AERKFKDREVKAVVCTRTLELGIDVGSVERVFQVGSPSLPAYFAQRVGRASHRPGEPARG 410 Query: 427 LFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 DLV+SA I+ + G P +D+ +Q +A + Sbjct: 411 TLVCLDMNDLVESAAILSMLGRGSFGARRGPPPAMDLALRQALALVLQHGDKAGA----- 465 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARP-----GAQLL 541 + L L P+ R L E G++ R G + Sbjct: 466 -----------QAVAELLGSLLSHVPASWGLGAREALRVLEERGLVEEREVVDVYGERAR 514 Query: 542 AVTSGGTIPDR-----GMYSVLLP--EGEEKAGSRRVGELDEEMVYESRVNDIITLGATS 594 + GG P+ ++++ E E + G RVG +D + + +I LG Sbjct: 515 VLRLGGRFPEAWRKIGAFFTMIPERSELEVRHGRERVGVVDVVNLRLMKRGVVIRLGGKC 574 Query: 595 WRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 WR++++ VIV P +P WRG P +G + FL A ++ Sbjct: 575 WRVKELRGRFVIVEPEASDRFAIPVWRGGYVLAPQSVGLEVYRFLSKAARLHRRGTSLGE 634 Query: 655 W-------LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCR--------------DE 693 W +E + L EE +PG R +V++R + E Sbjct: 635 WRSGGVAFRLDEEARRGLAVLAEELSARGVPMPGPRRMVVDRVKASALGALDRFLGVSPE 694 Query: 694 IGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAA 753 +L P+G + A + G+ + V+ GI+ R P Sbjct: 695 PRATTTVLLYPFGDYIANTLAALLW-----SSGSVSKVIPRSYGILVR--HEASFDPLEY 747 Query: 754 IFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLE 813 + + V EAV SS + R R+ L Sbjct: 748 LL----GAGRREVEEAVKSSPY--------------VYVVAFELRRSFGYSRISEKTL-- 787 Query: 814 IAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTT 862 D + E +R+ YD+ RL+ + G I +S+ Sbjct: 788 ----EEDKLLREECVRQAKHRFYDVEGALRLLDWVRHGCISVSERLVER 832 >UniRef50_B8I966 DEAD/DEAH box helicase domain protein n=8 Tax=cellular organisms RepID=B8I966_CLOCE Length = 741 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 156/674 (23%), Positives = 253/674 (37%), Gaps = 94/674 (13%) Query: 15 FSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFRE 72 +P R++ + + + VQ + V ++ H L+ A T SGKT AAFL L +L + Sbjct: 10 LAPFIREYIYTHGWTELRDVQLEACKVIFDTDDHLLLAAGTASGKTEAAFLPVLTQLHEK 69 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 T +LYI P+KAL D L LK EV++ V Sbjct: 70 PSS---------TIGVLYIGPLKALINDQFLRLDDLLK------------EVDIPVWHWH 108 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAGSKR 189 GD +++ ++P IL TPESL M+ +R E + +IIDEVH S R Sbjct: 109 GDVSQSHKNRFMKDPRGILQITPESLESMIINRDNEISRIFGDLRFIIIDEVHVFMESDR 168 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP-PAMRHPQIRI 248 G + LERL +RIGLSAT+ S +LG V P +IR+ Sbjct: 169 GRQVLCLLERLSRYFEKEPRRIGLSATLGDYSLAEKWLGSGTKRRVATPKTETSQQKIRL 228 Query: 249 VVP-VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 V D + S + T +E ++ + + + ++F N+R AE+ Sbjct: 229 AVEHFYISDPIDSKSKLTISSKDEVKEQNLTTDKYYEYIHSKCKAQKCLIFANNRTEAEQ 288 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L ++ A+ S I HHGS+S R Sbjct: 289 VITNLRQIAKAK---------------------------SLPDIYHVHHGSISASLREAA 321 Query: 368 EQALKSGELRCV-VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ------- 419 EQA+++ + V AT +LELGID+G ++ VIQ+ P SV+S LQR+GR+G + Sbjct: 322 EQAMRAQDHPAVTAATVTLELGIDIGHLERVIQLGAPFSVSSFLQRLGRSGRRGSPPEMW 381 Query: 420 -----VGGVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTVAAAA 473 + KG + L+ + I++ +E + P ++ Q ++ Sbjct: 382 FACYEEASMDKGALPAQIPWQLIQTIAIIQLYLEERWIEPIEQKKCPFSLMYHQIMSILI 441 Query: 474 MDA-LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL 532 L +V +P+K++ + F L L + G++ Sbjct: 442 TKGELSPAALAQKVLTLSPFKEVSQEDFKELLRHLIK----------IDHIQLTERKGLI 491 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLP--EGEEKAGSRRVGELDEEMVYESRVNDIITL 590 G QL+ Y+V E K + +G + + + L Sbjct: 492 VGLAGEQLVRSF--------RFYAVFAENVEYTVKDDTSEIGSI----INPPPPGERFAL 539 Query: 591 GATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG 650 +W + +I IV +W G G G +L + + L + Sbjct: 540 AGNTWVVVEIDPKNKIVYSKKVNGRVRTYWSGGGGGIHIKLLQRMRKVLFEEKVYPYLKE 599 Query: 651 TIPPWLAEENTIAN 664 L A Sbjct: 600 KAKERLQIARDFAR 613 >UniRef50_A1VV81 DEAD/DEAH box helicase domain protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VV81_POLNA Length = 675 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 182/764 (23%), Positives = 281/764 (36%), Gaps = 126/764 (16%) Query: 13 DVFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D PA + + + Q Q H L++APT GKT AA + L R+ Sbjct: 5 DKLHPALQYHVVNSLGWSSLRPTQLQAIEPILSGVHCLLLAPTAGGKTEAAIIPVLSRML 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 H ++Y+ PIKAL ++++ L + V RV + Sbjct: 65 ---------THAWPGVSVIYVCPIKALLNNLEQRLSHYAR------------LVGRRVAV 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGS 187 GD ++ ++ PDIL+TTPESL ML S + + VI DE+HA A Sbjct: 104 WHGDVSQSKKGHALKDAPDILLTTPESLEGMLVSTRIDRKVWFGNLRVVIADELHAFAAD 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG H+ L RL + QR+GLSATV + +++ + Sbjct: 164 DRGWHMRAVLHRLQQYVPQEMQRLGLSATVSNPAELLDWFA------------------- 204 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 P V S + T D GS+ ++ + R +VF++SR AE+ Sbjct: 205 ---PTGIKQVVGSASVSTDADVTVDFVGSLANA--ATVIARLHRGSKRLVFSDSRSSAEQ 259 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 LT+ L R Q F++ H S+S +R + Sbjct: 260 LTSML------------------------------RAQEVRTFLS---HASLSHSERKLA 286 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E A + +VATS+LELGID+G +D VIQ+ P +V+S LQR+GR G + G L Sbjct: 287 ETAFAEEKDCVIVATSTLELGIDVGDLDHVIQIDAPATVSSFLQRMGRTGRREGARRSCL 346 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRV 486 F L+ + I +E PP P ++AQQ + A A E + + Sbjct: 347 FLCTNDDSLMLAIGICRLWGEAWVEAAYPPPEPWALVAQQAMVATLERAQWPRRELIALL 406 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 A P + R +D + S L T R + L + Sbjct: 407 CGAFP--ESSRPGITDVIDHM---VASSYLMDTHGVLQIGPATEKQFGRAHYKDLLASFS 461 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 GT + GS VG +D M+ + +I L SWRI +I + Sbjct: 462 GT-----------QLLLGRCGSAEVGYIDPTMLAGDKPVRLILLAGKSWRITEIDWKRQT 510 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQ 666 V P + W G G E+ + I L A E+T+ + + Sbjct: 511 VWLEPAKEGGTARWNGSGRTLSREIAQGILRALRQ--------------GAGEHTVISKR 556 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 +E ++ + L R+E G R L + G R + A I + Sbjct: 557 ARLEIEQVTQDLPETGNDGALSVTRNEAGAAR--LWTFAGTRANRTLARQIQSLAESR-- 612 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAI---FLFEPEKLLQIVR 767 GI + P L + F PE++ ++ + Sbjct: 613 -----RIDAMGIDLKTPVDLSDLSAELLSTALAFSPEEVKELAK 651 >UniRef50_B8JFR7 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=B8JFR7_ANAD2 Length = 701 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 162/663 (24%), Positives = 253/663 (38%), Gaps = 113/663 (17%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 + AVQ ++A+V+APT GKT A+ AL L G E Sbjct: 20 GWTALRAVQELAGEAILDGKNAVVLAPTAGGKTEASIFPALANLVENGCE---------G 70 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 ++Y++PIKAL + + L + V LR + GD P +++ + R Sbjct: 71 VGVVYVAPIKALLNNQEERLGTYTE------------MVGLRRFVWHGDVPDRDKREFVR 118 Query: 146 NPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 P ++L+TTPESL +ML S + + VI+DEVHA AG++RGAHL LERL Sbjct: 119 EPAELLMTTPESLEVMLLSPRFPTPKVFPDLRMVIVDEVHAFAGTERGAHLMSVLERLIK 178 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPP---AMRHPQIRIVVPVANMDD 257 QRIGLSATV + ++ +L G R VV+PP A R + + V ++ Sbjct: 179 STKNDVQRIGLSATVGNPEEILGWLQGTSRRAGVVVDPPKVSARRELHVSLHESVIDIAR 238 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 ++ + ++ F SR L E + R+ Sbjct: 239 DAARRAA---------------------------GNKSLFFCQSRALTESVAERMRGHGT 271 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 HHGSVS+E+R E G Sbjct: 272 E---------------------------------VFVHHGSVSREERHDAEAQFNHGTNA 298 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLV 437 C+V TS+LELGID+G +DLV+Q P +V+S LQR+GR G + G + FF + Sbjct: 299 CIVCTSTLELGIDVGDLDLVMQANAPSTVSSFLQRMGRTGRRAGQTANTSFFCEDEDAAL 358 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLP 496 + +VE G +E + V A Q A A+ + + + + D+ Sbjct: 359 QAVALVELAREGWVERVPAARRCWPVFAHQIFALTLQYGAVSPERCWEHLHVVRDFADIS 418 Query: 497 RRVFDATLDMLSGR---YPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 R F+ LD + + SG + K + R +L AV S Sbjct: 419 RDEFERVLDHMKRHEYLFESGGLLSLGQK-----AERVYGKRNFLELYAVFSSPV----- 468 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVN-DIITLGATSWRIQQITRDQVIVTPAPG 612 +Y V E A R +G L++ V + L +W ++ + + +V Sbjct: 469 LYQV------ETAAGRALGSLEQNFVDQLVEEMSAFLLAGRAWLVEHVHHEDRVVRVREA 522 Query: 613 RSARLPFWRGEGNGRP-AELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI--ANIQGLI 669 + P W G E+ + + L + + ++ I Sbjct: 523 PRGQKPSWGGFAPSLLGFEICQRMKRVLTDSTPVPYADAAAMRAIEARRKDLGDTLRRPI 582 Query: 670 EEQ 672 Q Sbjct: 583 AMQ 585 >UniRef50_A9WLQ1 ATP-dependent helicase n=3 Tax=Micrococcaceae RepID=A9WLQ1_RENSM Length = 409 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 148/423 (34%), Positives = 201/423 (47%), Gaps = 44/423 (10%) Query: 971 LENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLR 1030 + L+ R F + I+GQ L ++DAAR+RDALG+ LP +P ++ V PL DL R Sbjct: 3 ITELVKANRAFTSKIAGQSVLLAVEDAARVRDALGLPLPMGIPLAFIEPVLDPLGDLVSR 62 Query: 1031 YLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-----------QDIWVSDE 1079 Y R H ++A F LG+AIV+ L +L G V+ + W + Sbjct: 63 YARTHGPFLTSEVAARFGLGVAIVQSALDRLGADGRVVQGEFRPIATQGGATGLEWCDAQ 122 Query: 1080 VFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGV 1139 V RR+R RSL A R PV YAR L Q + G DGV Sbjct: 123 VLRRIRQRSLAALRAEVEPVDRAAYARFLPAWQHI---------------NSSLRGHDGV 167 Query: 1140 MRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVAL 1199 + VI+QLAGV +P S E +L RVRDYS +LDEL+A+G V+WSG L +DG ++L Sbjct: 168 LTVIDQLAGVPIPVSAVEPLVLAVRVRDYSPALLDELMASGEVLWSGAGSLPGNDGWISL 227 Query: 1200 HLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQ 1259 HL E AA + +PAE AL + L+ GGA+F QQ+ + D E AL Sbjct: 228 HLAESAALTLSPAEDYMPG--ALALRVQEFLSSGGAYFFQQLRLGLSDT--ELPSNEALT 283 Query: 1260 EALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPV-------SP 1312 ALW LVW G + ++ +AP+R + A R+ R R GR AQ P Sbjct: 284 SALWELVWAGRVGNETFAPVRGMLDGGHTAHKQKARTPRLRPGRLPGAQGAGRYAGLSRP 343 Query: 1313 RVSYNTPNLAGRWS--LLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSM 1370 +P + GRWS + E L T R A+A D +G + R + GG Sbjct: 344 ATPMGSPMVGGRWSSFAVATEVLEPTVRAHAMA----DTHGPL-RGSHARLGCRGGSARR 398 Query: 1371 QTL 1373 L Sbjct: 399 IRL 401 >UniRef50_A7IB28 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7IB28_METB6 Length = 698 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 174/720 (24%), Positives = 271/720 (37%), Gaps = 119/720 (16%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 + VQ Q + LVIAPT GK+ AA + LD + + G Sbjct: 2 GWSGLREVQEQAYAAIREGNDTLVIAPTAGGKSEAALIPVLDDILKTGA---------PG 52 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 LYI+P+KAL D + + + V+L + GD P +R Sbjct: 53 ISCLYIAPLKALINDQEERIAGFCR------------PVSLTLARWHGDVPKGDRGWKED 100 Query: 146 NPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 + P L+ TPESL ++L A L V VI+DE+HA S+RG HL + L+RLD + Sbjct: 101 DAPQFLLITPESLEVLLHEPVAASALSSVRYVIVDELHAFVESERGVHLRVLLDRLDRIA 160 Query: 205 HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASG 264 +RIGLSATV + +V A+ G R R + + P + V S Sbjct: 161 TAPVRRIGLSATVGNPDEVLAWFSGGR---------GRSKVVSVAAPPSQKVFRFVVESD 211 Query: 265 TGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP 324 G+ A L ++ + +VF NSR AE + + Sbjct: 212 PGKRIDA--------------LVRLVAGKKALVFVNSRSAAETVIREV------------ 245 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 S + HH S++ ++ E+A + C++ TS+ Sbjct: 246 ---------------------SGRIENLHIHHSSIAPIKKKEAEEAFRGSGGACIICTST 284 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 LELGID+G +D+V+Q P SV+S LQR+GRAG + S +L+ +E Sbjct: 285 LELGIDIGDLDIVVQDGPPDSVSSFLQRMGRAGRRDRAASVAWIL-SDPGELLAGCATIE 343 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQ-VDEWYSRVRRAAPWKDLPRRVFDAT 503 C + E L PP P +VL QQ A ++R + + D Sbjct: 344 CAQKKQTEPLEPPEKPWNVLVQQLFLALLSGPRAGRGTIVRQLRSFSVFAQCFAEEIDRL 403 Query: 504 LDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEG 562 LD L + Y S D P R G+ R +L +V +GG Y + P+G Sbjct: 404 LDHLITTGYLSADGDLLVPGPEAERAFGLSRVR---ELYSVIAGG-----SEYRAVTPDG 455 Query: 563 EEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS----ARLP 618 E +G +D + D LG W + + +V PG +R+ Sbjct: 456 EV------IGAIDARFAHREEPGD-FVLGGAIWSVVKCDESHNLVVVVPGGDIPGTSRIF 508 Query: 619 FWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGI 678 G + I + A T+P + T++ + +G+ Sbjct: 509 RATGGEAAFSPVICAGIQRIV------ARKKSTLPLCEVDAETLSRAISAFPQGIGESGL 562 Query: 679 VPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI 738 ER + + ++S GRR ++ A + G++ V D I Sbjct: 563 F-----FREERSTE---GRVVSVYSFSGRRFNQVLAYLLKGKLDR-----VQVRYDDCRI 609 >UniRef50_A2SRH6 DEAD/DEAH box helicase domain protein n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SRH6_METLZ Length = 710 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 178/716 (24%), Positives = 277/716 (38%), Gaps = 114/716 (15%) Query: 15 FSPATRDWFLRA--FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 P ++ L + VQ +T+ + LV+APT GKT +AF LD + ++ Sbjct: 7 LHPTLQELLLTGLGWDDLRLVQEETYLSVSSGADTLVLAPTAGGKTESAFFPVLDGILKD 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E +YISP+KAL D + L ++ Sbjct: 67 PSEHLS---------AIYISPLKALINDQLDRILFLCA------------RTELSAAVQH 105 Query: 133 GDTPAQERSKLT-RNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRG 190 GD ++R DIL+TTPESL ++L+ + + + V +IIDE+HA S RG Sbjct: 106 GDVSDRDRFDFAGSEHADILLTTPESLEVLLSDAKTKNAFKEVRYLIIDEIHAFMESDRG 165 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 HL ++RL+ L RIGLSATV + + + G P + + I Sbjct: 166 VHLRCLMDRLEFLGKKRMIRIGLSATVGNPEALLDWFSG---------PNRKKHLVSIPS 216 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + + E G+ +I Y+ + ++FT SR LAEKL Sbjct: 217 PPSKKQ-----FTFVVEPEFTGQVRAIAGYV---------SGKKALMFTESRSLAEKLVL 262 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L E + HH SVS + R E + Sbjct: 263 PLREELPS---------------------------------VFLHHSSVSPQDREAAELS 289 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 CV+ TS++ELG+D+G +DLV+Q P SV+S LQR+GR G + G +K +F Sbjct: 290 FGQVGGTCVICTSTMELGVDIGELDLVVQYGPPRSVSSFLQRLGRTGRR-GSPAKMIFIV 348 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRA 489 DL+ + ++E +E+L P P VL QQ + + +R Sbjct: 349 SNACDLLIAVSVIEAAMQHSVESLKAPSRPYHVLVQQLFLLLKGRTGMSIRSIIDSLRAL 408 Query: 490 APWKDLPRRVFDATLDML-SGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 P+KD F A L+ L + Y + + E G + LA+ Sbjct: 409 TPFKDFSVAQFSAVLEYLVAENYLTCSGDLYIAGTKAEMELG------RSNWLAL--ISV 460 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT--RDQVI 606 I D G + +LPEG VG LD V + +WR+ +V+ Sbjct: 461 IRDAGGFLAVLPEGTV------VGTLDPRFVA-GDPGKTFSFTGKTWRLLHRDDAHKRVL 513 Query: 607 VTPAPGR-SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANI 665 + PA + + PFW G G A L + A IP + Sbjct: 514 IEPAFAKGDVKRPFWSGGDGGSYAST-------LVCQSVAAVLGRGIPSLPLPLEQKTMV 566 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + LI + PG+ HL R E+ + +++ + G R ++ A + R+ Sbjct: 567 EDLIRMLPD--DFSPGTIHL---RTEPELNGYSVVVSTFLGTRTNQTLAHLLKTRL 617 >UniRef50_D0LTA5 3'-5' exonuclease n=2 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTA5_HALO1 Length = 925 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 156/642 (24%), Positives = 243/642 (37%), Gaps = 93/642 (14%) Query: 26 AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 + VQ + ++A+++APT GKT AA L L G + Sbjct: 20 GWTALRPVQEEAGAAILDGKNAVILAPTAGGKTEAAMFPVLADLVAAPGLG-------PS 72 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 R LYI+PIKAL + L + + + ER + GD A ER + R Sbjct: 73 VRALYIAPIKALLNNQAERLGLYTEMVGLERF------------LWHGDVGASERQRFLR 120 Query: 146 NPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 P D+L+TTPESL +ML S E + VI+DE+HA+AG+ RGAHL +ERL Sbjct: 121 EPADLLMTTPESLEVMLISPKIAVSEIFADLRVVIVDEIHALAGTDRGAHLMSVIERLAQ 180 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 QR+GLSATV + + ++L G V + P R ++ + Sbjct: 181 HAGRDVQRVGLSATVGNPDAILSWLRGTSQRGDVVVDPPKPPTRRELLVHLDGALGGLAG 240 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 + ++ F SR E++ RL + Sbjct: 241 RAAKRAAGKK----------------------SLFFCESRAQTEQIAERLGDRGVE---- 274 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 HH +VS E+R E+ + G +V T Sbjct: 275 -----------------------------VFVHHSAVSLEERERAEERFQRGGDAAIVCT 305 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVI 442 S+LELGID+G +D V Q+ P +V+S LQR+GR G + G V+ F ++ + + Sbjct: 306 STLELGIDVGDLDQVFQIGAPSTVSSFLQRMGRTGRRAGSVANTTFLCDEPESVLQAVAL 365 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD-ALQVDEWYSRVRRAAPWKDLPRRVFD 501 +E G +E+ QT+A + ++ DE + +RR + FD Sbjct: 366 IELARVGWVESTPAQTRCWPAFVHQTLAMSLQQGGVRRDELRAHLRRVPDLAGISDAEFD 425 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 + + R + + ++ +R R +L AV S Y V Sbjct: 426 EVIAYMIRRGLL--YDSGGVLVMGSRGERAFGRRNFLELYAVFSSP-----QYYRVHTQN 478 Query: 562 GEEKAGSRRVGELDEEMVYESRVN-DIITLGATSWRIQQITRDQVIVTPAPGRSARLPFW 620 G R +G L+++ V N LG +W + I Q V+ +P + P W Sbjct: 479 G------REIGWLEQQFVDGLVENMSSFLLGGRAWLVHAIHHGQRAVSVSPAPRGKKPSW 532 Query: 621 RGEGNG-RPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT 661 G EL + + L A+ S L Sbjct: 533 GGFLPKFVGFELCQRVRRLLVEDETPAYLSDDARAALESYRE 574 >UniRef50_C7PFC4 DEAD/DEAH box helicase domain protein n=2 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFC4_CHIPD Length = 716 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 169/849 (19%), Positives = 301/849 (35%), Gaps = 163/849 (19%) Query: 14 VFSPATRDWFL-RAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 + S R + + + +Q +E + ++++ T SGKT AAFL L ++ Sbjct: 6 LLSEPIRRYINDKRWGAFRPIQSAAIKRILGTEDNYILVSRTASGKTEAAFLPILSKV-- 63 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 K ++LY+SP+ AL D ++ + I ++ + Sbjct: 64 --------DFKEPGVQVLYVSPLIALINDQFVRVEDLCRYI------------DVSITRW 103 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSK 188 G+ + KL + P +L+ TPES+ + T+ AR ++ ++IDE+H GS Sbjct: 104 HGEANQAAKKKLLKQPEGVLLITPESIESLFTNHPEHARALFSRLKFIVIDEIHTFLGSD 163 Query: 189 RGAHLALSLERLDALL-HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG HL L R++ L + +GLSATV + F G V+ P + R Sbjct: 164 RGMHLRSLLSRINDLAADKKPRIVGLSATVGDYEEPKRFTGDPAHTKVLIDPTAKGINAR 223 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +E P + ++V + ++F N+RG AE+ Sbjct: 224 F--------------------KYFKQEDEYTPQFIEELYNQV-KDSKVLIFPNTRGNAEE 262 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + +L + S R + F SHH +V KE R Sbjct: 263 IAVKLKRV-------------------------SERKKGHPYFF--SHHSAVDKELREYV 295 Query: 368 EQALKSGELR--CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E K+ + C+ TS+LELGID+G V+ VIQV S+AS +QR+GR+G + G S+ Sbjct: 296 EDFAKTNKRNNFCIACTSTLELGIDIGTVETVIQVDATHSIASLIQRVGRSGRREGHESQ 355 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYS 484 L + + S E +E + P D++ QT++ + L Sbjct: 356 LLLYATEHWSTLQSFACWELFKEQFVEPVYSQEKPYDLMFHQTLSILKETNGLGRQALLQ 415 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 R++ + D+ LD + S R +L+ E LT Sbjct: 416 RLQNNPVFSRFSAAEIDSLLDYM---IKSEYIEDLRRELIVGAEGEKLTT---------- 462 Query: 545 SGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 R YS+ + K +GEL E+ VND I L A W+I I Sbjct: 463 ------SRDFYSMFMSAVMLKVIHAGVTIGEL--ELTPWLEVNDNILLSAKIWKIADIDL 514 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 + P + P + + + + + L+ + + +++ Sbjct: 515 KAKKIFVIPANDGKKPVFTSGSGDVHPRIRQKMMELLNADLNRDEADDSAI------DSV 568 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA--GR 720 I+ L ++ R + R +++ I +++ G +++E I Sbjct: 569 NEIKLLFKDFR--LDHLSAVRPAIVKH-------KEIDIYTFTGTKINETLFFLIKTLHI 619 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 L + + D+ I +L+ +R + + + Sbjct: 620 AAELEDRKSRLRVFDNSINLN-------------------ELVANLRHQLLNIKM----- 655 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 + L G R W L +E LQ+ +D+P Sbjct: 656 -HVST---LFENGEDGFRLSKWAVYLPVELKVEY----------------VLQNSFDIPG 695 Query: 841 LERLMRRLN 849 + L Sbjct: 696 TTAFLEGLQ 704 >UniRef50_B8GFB2 DEAD/DEAH box helicase domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFB2_METPE Length = 716 Score = 355 bits (911), Expect = 9e-96, Method: Composition-based stats. Identities = 171/723 (23%), Positives = 266/723 (36%), Gaps = 118/723 (16%) Query: 14 VFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 P R + +Q Q W A+ + LV+APT GKT AA + +DR+ R Sbjct: 8 ALHPTLRQTLQHRLGWDDLRPLQEQAWQAASGGDDLLVLAPTAGGKTEAAMIPVIDRILR 67 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 EG LY+SP+KAL D + + + + V + Sbjct: 68 EG---------LAGIACLYLSPLKALINDQEERITTLAR------------PAGITVQMW 106 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRG 190 GD P ER +PP IL+ TPESL ++L E L + V+IDEVHA RG Sbjct: 107 HGDVPKGERRW--EDPPQILMITPESLEVLLLDPVLSEDLAQLRAVVIDEVHAFVPDPRG 164 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIV 249 HL + L+RLD + QRIGLSATV + + +L G R VV + + Sbjct: 165 VHLKVLLDRLDTITGGKVQRIGLSATVGNPESILGWLSGPGRQGQVVRSTGLPAEKRFSF 224 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 + + + + +G V+ R +VF SR AEK+ Sbjct: 225 IVREDPIERYQLLTG------------------------VVAGRRALVFVKSRSEAEKV- 259 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 R +++ A HH +++ + R E+ Sbjct: 260 --------------------------------RRSIGAEIPHAYVHHSALAPDLRRAAEE 287 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 A C++ TS+LELGID+G +DL++QV P SV+S LQR+GR+G + G + F Sbjct: 288 ATTRPGPVCIICTSTLELGIDIGDLDLIVQVGPPTSVSSFLQRLGRSGRR--GSPATMTF 345 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQ-VDEWYSRVRR 488 DL+ + ++E ++E L+PP P V+ QQ + + Sbjct: 346 LLGPEDLLITLAVIEAAAVHQVEPLSPPEKPYAVVLQQMLLYLIKSGRTSRSSLSRHIFP 405 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 P+ D +D L ++ + L +V S Sbjct: 406 LFPFLSANPETIDRLIDNLIELGIMATDGGLL--MLGDAGETTFGGAGRKDLFSVLS--- 460 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ--VI 606 Y V+ P+G+ R+G LD ++ D LG W + + VI Sbjct: 461 --SVSEYQVITPDGD------RIGRLDGRSLH-LMPGDAFPLGGRLWSVAGCDQQHHLVI 511 Query: 607 VTPAPGRSARLP-FWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANI 665 VT A P FW G + + + + + G LAE + Sbjct: 512 VTRASAGQCSTPIFWIGSRSSLTPLVARGMLEIIAAGKTNVPIDGEEQALLAEICST--- 568 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 V S V E +R+++ S G ++ A + R+ Sbjct: 569 ---------YPSGVRQSGLQVWEE--PLATGFRVVVLSFQGSLFNQVLATLLEDRLSCRV 617 Query: 726 GAD 728 Sbjct: 618 RYT 620 >UniRef50_B4SBA5 DEAD/DEAH box helicase domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SBA5_PELPB Length = 734 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 146/782 (18%), Positives = 281/782 (35%), Gaps = 129/782 (16%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 + + W + + + Q + ++ A T +GKT AAFL +L Sbjct: 14 LLDEKIQRWIWEQKWMTLRDAQERAIAPILAGNTDVIIAAATATGKTEAAFLPICSKLL- 72 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 A + + + +LYISP+KAL D ++ + + ++ V Sbjct: 73 --------AKECQNASVLYISPLKALINDQFSRMEQLCERL------------DIPVHPW 112 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR---ETLRGVETVIIDEVHAVAGSK 188 GD ++ K + P IL+ TPES+ + + + + ++IDE+H+ GS+ Sbjct: 113 HGDVSVSKKGKFLKKPTGILLITPESVEALFVNHGSAVPQIFNNLLYIVIDELHSFIGSE 172 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---RPVTVVNPPAMRHPQ 245 RG L L R++ + RIGLSAT+ + FL + + V +V+ + Q Sbjct: 173 RGQQLQSLLHRIEFAIKRKIPRIGLSATIGDMHLASRFLRPETEAKTVIIVSNATGQELQ 232 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + + V + + + E +GS E L + LR +S ++F NSR Sbjct: 233 LLLRGYV----NKAPLLHPIEETEEVPPDGSSLEIGED--LFKTLRGKSNLIFPNSREQV 286 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E + L + + HHG+++K R Sbjct: 287 ENFSDLLRNKCEEQHLPNEFW---------------------------PHHGNLAKGLRE 319 Query: 366 ITEQALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E A+K +V TS+LE+GID+G+V + Q+ P SVAS QR+GR+G + G + Sbjct: 320 EAEAAIKDKSHPVNIVCTSTLEMGIDIGSVISIAQIGVPPSVASLRQRLGRSGRKDGDPA 379 Query: 425 KGLFF-------------PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 + R +L+ + +V + E L + QQ ++ Sbjct: 380 ILRIYIQENEVTISSKPLACLRSNLIQTIAMVRLLLEKWYEPPPSGGLHLSTMVQQLLSL 439 Query: 472 AAM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETG 530 A + + Y+ + + ++++ +++F L L + Sbjct: 440 IAQYGGITAVQAYNLLCKNGAFQEIGQQMFVDLLRTLGNQRL------------------ 481 Query: 531 ILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDII 588 I+ A G L + Y+ E + G R +G L + E VN ++ Sbjct: 482 IMQASDGLLLHGQLGERIVNHYSFYAAFTTPEEYRLLTGDRTLGTLPLDRPVE--VNSLL 539 Query: 589 TLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFF 648 G W + + + +++ P +LP + G+ ++ + + F Sbjct: 540 IFGGRRWTVLDVDAQKKVISLKPATGKKLPQFDGQAGRVHDQIRKEMFAVYTEKGIPIFL 599 Query: 649 SGTIPPWLAEENTIANIQGLIEEQRNATGIVP-GSRHLVLERCRDEIGDWRIILHSPYGR 707 A + L+ E R A + ++ +++ L G Sbjct: 600 D-------------AQAKELLGEAREAFDRLSLSNKKILI-------QGNETYLFCWMGD 639 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVR 767 ++ + + + + A++ GI I + + E + Sbjct: 640 KILDTLVAMLRSK---------GLTANNYGIAIEISSVSPNKLQSCLRALLKEGVPDAYE 690 Query: 768 EA 769 A Sbjct: 691 LA 692 >UniRef50_Q74ZT5 AGR113Wp n=3 Tax=cellular organisms RepID=Q74ZT5_ASHGO Length = 2154 Score = 352 bits (904), Expect = 6e-95, Method: Composition-based stats. Identities = 128/581 (22%), Positives = 225/581 (38%), Gaps = 64/581 (11%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAF-----KQPTAVQPQTWHVAARS-EHALVIAPTG 54 + P P P V + DW ++F K +Q + + +A + ++ L+ APTG Sbjct: 468 IPAPPKPVDNFPLVSISSLVDWAQKSFPTAETKTLNRIQSEVYPIAFGTDKNMLLCAPTG 527 Query: 55 SGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD 114 +GKT A L L RL + + ++ +++YI+P+KAL + R Q L+ Sbjct: 528 AGKTNVAVLAIL-RLLSKYYKAETKSFNTSKFKVVYIAPLKALVQEQVREFQRRLQ---- 582 Query: 115 ERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGV 173 + L+V TGD ++ IL++TPE ++ + R + V Sbjct: 583 --------QYGLKVAELTGD---SNLTRQQIMEAQILVSTPEKWDVITRNGLNRHYTKLV 631 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 + +IIDEVH + +RG + + RL+ T + + LSAT+ + +D+A FL Sbjct: 632 QLLIIDEVHLLHD-ERGPVIESIVARLETQGSTETRVVALSATLPNYTDIAEFLRVPSDG 690 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 + R P+A G E + R ++ +L+ V + Sbjct: 691 LFYFDASFRP------CPLAQQ------FCGITETNSVKRVNAMNQVCYEKVLESVAENH 738 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDV 349 IVF +SR + L + + S DA E T T Sbjct: 739 QVIVFVHSRKDTARTAIWLRDKLLEEDKISSFAPQDAGSAEILKRETENITDKSFGDVVQ 798 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP--- 403 HH +S++ R++ E G ++ +V+TS+L G+++ A ++I+ + +P Sbjct: 799 HGFGIHHAGLSRDDRSLAEDLFADGLIKVLVSTSTLAWGVNLPAHTVIIKGTEMYSPQKG 858 Query: 404 ----LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLEN 453 LS LQ +GRAG + +G+ +++ + +E F + Sbjct: 859 SWVSLSSQEVLQMLGRAGRPRYDTFGEGIIITNQSNIHYFLAILNQQLPIESQF---ISK 915 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA-PWKDLPRRVFDATLDMLSGRYP 512 L N VL +D L Y R+ + +K DA L R Sbjct: 916 LPDNANAEIVLGTVKNRIDIVDWLGNTYLYVRMLKDPKLYKVADEIETDAALLSYRERLA 975 Query: 513 SGDFSAFRP--KLVWNRETGILTARPGAQLL--AVTSGGTI 549 +V+N TG + + ++ S TI Sbjct: 976 HAALRLLHENNLIVYNPVTGDVQSTDLGRIASQYYISYTTI 1016 Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats. Identities = 87/506 (17%), Positives = 170/506 (33%), Gaps = 69/506 (13%) Query: 27 FKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 FK Q ++ + E+ + A GSGKT A L L + Sbjct: 1345 FKVFNKFQTHVFNALYHTDENVFIGACKGSGKTAMAELALLSH------------WRDGK 1392 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 R +YI P + L + D R R + T + R T Sbjct: 1393 GRAVYICP----SQEKIDFL------VKDWRNRFLNVAGGKVINKLTLELTNNLR---TL 1439 Query: 146 NPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL- 203 +++ TPE L+ + R+ ++ +E +I+D++H ++ GA + R+ + Sbjct: 1440 AQSHLILATPEQFDLLSRRWKRRKNIQTLELLILDDLHMISSDLPGARYENIISRMLFIR 1499 Query: 204 --LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 L T+ + +GLS ++ + DV +LG + R ++I + + S+ Sbjct: 1500 GQLETALRIVGLSTSLANGRDVGEWLGAKKATIFNFSFHERVMPLQIHLQSFHKMHEESL 1559 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA--AR 319 + + + + V+ S ++F SR ++ L A Sbjct: 1560 IETMAKSAFL------------TVQNSVIAGSSVMLFVPSRKNCVHISVLLATAAAGTEY 1607 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 R + ++ + G ++ F +HG +S +AI EQA K + C+ Sbjct: 1608 SLRPQKLGLETHLPKVEDGNLRESLKHGIGF---FYHG-MSSSDKAIVEQAWKQKLILCI 1663 Query: 380 VATSSLELGIDMGAVDLVIQVATPLS-----------VASGLQRIGRAGHQVGGVSKGLF 428 T L + + VI + T VA L+ +G A K + Sbjct: 1664 AITRDLC--VMAPFAETVIIMGTQYYEPREHRYVNYPVADVLEIVGTAQGNADYPGKVIL 1721 Query: 429 FPRTR-----RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 ++ ++ ++ E L + V+ +D + +Y Sbjct: 1722 MTTHDMKAYYKNFLNESLPTESYMLYYLHDGLINDIATSVIE---SKQDCVDWITFTYFY 1778 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSG 509 R+ + + L+G Sbjct: 1779 RRIHANPSFYGVKDTSPLGISAYLTG 1804 >UniRef50_A9F615 ATP-dependent helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F615_SORC5 Length = 713 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 176/725 (24%), Positives = 275/725 (37%), Gaps = 126/725 (17%) Query: 13 DVFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D +PA + + + + VQ T ++ +V+APT GKT AAF L + Sbjct: 5 DRLTPALQYQIVNTLGYARLRPVQELTIGPVLDGKNCVVLAPTAGGKTEAAFFPLLSAM- 63 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 +A + + ++Y+SPI+AL + + ER R T + RV Sbjct: 64 --------DAADWRPTSVIYLSPIRALLNNQE------------ERVTRFATTLGRRVAK 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGS 187 GDT R + DIL+TTPESL M+ S A+ G+ VIIDEVHA AG Sbjct: 104 WHGDTGQGARKAFLSDSTDILLTTPESLEAMMMSPRVPAKRVFAGLRAVIIDEVHAFAGD 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQ 245 RGAHLA LERL QRIGLSATV + + A+L G RP TV++PP Sbjct: 164 DRGAHLAALLERLSRFCGNDVQRIGLSATVGNPEQILAWLQGRSRRPGTVISPPREASAP 223 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + V M++ +S I+ +VF +SR Sbjct: 224 RLELDSVETMENAAS------------------------IVRRFHAGSKRLVFVDSRRGV 259 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E++ RL DV++ HGS+S +R Sbjct: 260 EEIGTRLRR------------------------------DGVDVYMV---HGSLSAPERR 286 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E+A +V+TS+LELGID+G +D VIQ+ +P +VAS LQR+GR G + G + Sbjct: 287 DAERAFAERTDCVIVSTSALELGIDIGDLDHVIQIDSPSTVASFLQRLGRTGRRAGAQAN 346 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYS 484 F + +A ++ G +E++ +LA Q +A + +W++ Sbjct: 347 CTFLAVKPAAALQAAALMRLHRQGYVEDVRAERRAAHILAHQLLALCIEHGGIGRGDWFA 406 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 + A + D+ A +D + G S +L E L R Sbjct: 407 WLDGATSFADIGPEERSALVDHMLEE---GILSDQEGRLWLGPEGEKLYGRR-------- 455 Query: 545 SGGTIPDRGMYSVLLPEG--EEKAGSRRVGELDEEMVYESRVN---DIITLGATSWRIQQ 599 +Y+V + + VG +D + + +LG +W++ Sbjct: 456 -----NFAELYAVFSTPRLIRVQHDTHDVGTVDASFLEALDSDARRAAFSLGGRAWQVVH 510 Query: 600 ITRDQ--VIVTPAPGRSARLPFWRGEGNGRPAELG-EMIGDFLHLLADGAFFSGTIPPWL 656 I + V PA + W G P LG + +L + G Sbjct: 511 IAWGRGLCHVKPADAAPSA--RWSGS----PTFLGYRLCQAMREVLVQEGYDPGWSARAR 564 Query: 657 AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVA 716 +++ + E G P G ++ + G R + A Sbjct: 565 LLIDSLRVEHAFLREADECNGPSPMVDD----------GGDTVVWWTFAGGRANLLLARM 614 Query: 717 IAGRI 721 I + Sbjct: 615 IEAEL 619 >UniRef50_B2JHB8 DEAD/DEAH box helicase domain protein n=11 Tax=Proteobacteria RepID=B2JHB8_BURP8 Length = 744 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 170/720 (23%), Positives = 263/720 (36%), Gaps = 101/720 (14%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D+ R W + + + Q + ++ A T +GKT AAFL L L Sbjct: 15 DLLDERIRRWIWREGWTELRDAQERAVPALIDADRDVIIAAATAAGKTEAAFLPILSNLL 74 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 R+ +LYISP+KAL D L + + + V Sbjct: 75 RDAPCRGS---------VLYISPLKALINDQWSRLDGLCEALQ------------IPVTG 113 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGS 187 GD + + + +NP +L+ TPESL M +R T + V++DE+HA GS Sbjct: 114 WHGDVSSGRKQRFVKNPTGVLLITPESLEAMFVTRGASLAATFGALRYVVVDELHAFIGS 173 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV-VNPPAMRHPQI 246 +RG L ++R+D + R+GLSAT+ A FL +V + A ++ Sbjct: 174 ERGMQLQSLMQRVDRVCGRRVPRVGLSATLGDMRLAAGFLRPKGAASVQIVESAEAGQEL 233 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 +I+V + E+ + +VLR + ++F NSR E Sbjct: 234 KILVKGYVEKPPRIQSEPGIENPGLEDVVPASTVDVANHMYKVLRGSNNLIFPNSRRQVE 293 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L + HHGS+SKE R Sbjct: 294 LYADLLRRACERDGYPNEFW---------------------------PHHGSLSKELREQ 326 Query: 367 TEQALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 TEQALK G+ + T++LELGID+GAV V QV P SVAS QR+GR+G + G + Sbjct: 327 TEQALKKGDRPASAICTTTLELGIDIGAVKSVAQVGAPPSVASLRQRLGRSGRRKGEAAI 386 Query: 426 GLFFP-------------RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 + R R LV S +V + G E L QQ ++ Sbjct: 387 LRCYCVEAELHSGSDLSDRLRESLVQSVAMVNLLLRGWFEPPRAGGMHPSTLVQQILSII 446 Query: 473 AM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A + +E + + P+ + + F A L L R + Sbjct: 447 AERGGARANELWDTLVAQGPFGAIDKATFTAILRGLGAR-------------------DL 487 Query: 532 LTARPGAQLLAVTSG-GTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDII 588 L G LL T+G + Y+ + E + AG+R +G + + Sbjct: 488 LVQEAGGLLLHGTAGERLVNHYAFYASFSTDDEFRIVAGARVLGSVPVSRP--LAPGQGL 545 Query: 589 TLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFF 648 G WR+Q++ + V P + P + G G+ E+ + + L A F Sbjct: 546 VFGGQRWRVQEVDAAKKTVYVKPDQGGVPPVFDGNGSLVHDEVRREMFNVLKDGAPVVFL 605 Query: 649 SGTIPPWLAEENTIANIQGLIEEQRNATGIV--PGSRHLVLERCRDEIGDWRIILHSPYG 706 T L E + AT V G ++ D I D ++L G Sbjct: 606 DSTGRELLEE------ARRYFASNELATRAVFTHGGNTVLATWSGDWINDALVVLLRAEG 659 >UniRef50_C6IVI9 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVI9_9BACL Length = 746 Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats. Identities = 160/751 (21%), Positives = 271/751 (36%), Gaps = 122/751 (16%) Query: 15 FSPATRDW-FLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFRE 72 +P +++ + + + Q + V + H L+ + T SGKT AAF AL L+ Sbjct: 10 LAPFIQEYIYRKRWDSLRDAQIEACRVLFDTPHHLLIASGTASGKTEAAFFPALTELYHR 69 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E ILYI P+KAL D ++ L+ + V Sbjct: 70 PSESVG---------ILYIGPLKALINDQFERIKELLRDG------------EVPVWHWH 108 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAGSKR 189 GD E++KL + P +L TPESL +L +R + ++IDEVHA G+ R Sbjct: 109 GDVAQAEKTKLMQRPSGVLQITPESLEGLLMNRPNAIPALFHDLRYIMIDEVHAFMGADR 168 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD--RPVTVVNPPAMRHPQIR 247 G + L RL+ + +RIGLSAT+ A +LG +PV VV+PP R ++ Sbjct: 169 GIQVISQLTRLERMASCKPRRIGLSATLGDYEIAARWLGAGTPQPVEVVSPPGGRKLKLS 228 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 V + D + + + + +VFTNSR AE Sbjct: 229 ----------VEHFSFPDARDEREAEHLELAKQKYYNFIYDNTHRKKALVFTNSRTDAEL 278 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 T L + A R +R + HHGS+S R T Sbjct: 279 TTLELRRIAAKREERD---------------------------VFHVHHGSISAMLREET 311 Query: 368 EQALKSGELRCV-VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E AL+SG V AT +LELGID+G ++ VIQ+ P S +S +QR+GR+G + S+ Sbjct: 312 EAALRSGPGPAVAAATVTLELGIDLGELERVIQLGAPYSCSSFVQRLGRSGRRGDQASEM 371 Query: 427 LFFPRTRRD------------LVDSAVIVEC-MFAGRLENLTPPHNPLDVLAQQTVAAA- 472 +F D L+ + ++E + +E + P+ VL QT++ Sbjct: 372 MFLCAEEEDEDAQLPARMPWTLLRAIAVIELYVRERWVEPVELRKKPVGVLYHQTMSTLK 431 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL 532 ++ + + V ++ + + A L L + I Sbjct: 432 SIGEAEPADLARAVLTLPAFRGVEPEEYKALLQYLL------------------QTDHIQ 473 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA--GSRRVGELDEEMVYESRVNDIITL 590 G ++ + + + Y+V + E GS +G + +L Sbjct: 474 QTEEGTLIIGLGGEKVVNNFRFYAVFKDDEEHVVYNGSEEIGSI----TTVPPPGYCFSL 529 Query: 591 GATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG 650 W+++++ V R W G G + + + L + + + Sbjct: 530 AGKLWKVEEVDSKHKAVYVKSSRGKVDTLWLGAGGDVHTRVMQKMRQVLEVHTLYPYLAP 589 Query: 651 TIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVH 710 L +A GL+ + ++P G + + G + Sbjct: 590 GAANRLERARRLARESGLL-----NSPVIP-------------AGGDSLFILPWAGSKQF 631 Query: 711 EPWAVAIAGRIHALWGADASVVASDDGIVAR 741 + + G V +V Sbjct: 632 RTLERLLKHNLSDPMGLRQVVPMEPYYMVVS 662 >UniRef50_C1YNJ7 Putative uncharacterized protein n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YNJ7_NOCDA Length = 381 Score = 348 bits (894), Expect = 8e-94, Method: Composition-based stats. Identities = 147/399 (36%), Positives = 202/399 (50%), Gaps = 22/399 (5%) Query: 1139 VMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVA 1198 + +E L G + AS E+ +LP+RV DY+ LDEL G V+W+G L DG V Sbjct: 1 MFEAVESLRGATVAASALETLVLPSRVEDYAPRRLDELTQAGEVVWAGAGALPGQDGWVC 60 Query: 1199 LHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGE-SVDLSA 1257 L + AA E + A++ L GGA F + ++ R+ G +V + Sbjct: 61 LAPADEAALLLP--EPVPPREGSTAHAVLEALRGGGALFFRDVADRVAGASGGSAVTDAE 118 Query: 1258 LQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYN 1317 L ALW LVW G +T+D APLRA+ S + R + R+ R A+PV P S Sbjct: 119 LVAALWELVWSGCVTNDTLAPLRAVLGSGAAPRRAPSRAGR-------LARPVLPTRS-G 170 Query: 1318 TPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSM 1377 P AGRW L + T R+LA E L+R G++ R P + R+M Sbjct: 171 PPAAAGRWWALPEREGDPTRRVLARLEARLERRGVLVRGYQGGRISP----DEYRVLRTM 226 Query: 1378 EDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLL 1437 E+SGR+ RG FV+GLGGAQFA +DRLR ++ A + PV L+A DPAN +G L Sbjct: 227 EESGRVRRGYFVDGLGGAQFALPGAVDRLRAVSGGAAE-----PVVLAATDPANPFGTDL 281 Query: 1438 PWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 PWP A P R AG+LVVV GG+L LY+ +GG+ +L + LL AL A+R Sbjct: 282 PWPG-DAQARPGRSAGSLVVVDGGRLTLYVGRGGRSVLTFGSPPALLERAA-RALAGAVR 339 Query: 1498 REPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 T+ + V TP+ L AGF +P+GL Sbjct: 340 DGRAGALTVERADGAEVFATPVDAALAAAGFHVTPKGLR 378 >UniRef50_C0WD26 DEAD/DEAH helicase n=13 Tax=Bacteria RepID=C0WD26_9FIRM Length = 756 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 144/698 (20%), Positives = 249/698 (35%), Gaps = 108/698 (15%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLF 70 D ++P +D+ R + + +Q ++ + L+ A T SGKT AAF L Sbjct: 5 DEYAPFVQDFIYRNGWDELRPIQVAAGDAIFHTDDNLLLTASTASGKTEAAFFPILS--- 61 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 +A+ K+ +YI P+KAL D + L ++ N+ + Sbjct: 62 ------LFDANPPKSVGCIYIGPLKALINDQFQRLTDLC------------SDGNIPIWH 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGS 187 GD ++KL R+P IL TPESL +L + + V+IDEVH++ Sbjct: 104 WHGDVSQSHKAKLMRHPSGILQLTPESLEAILLHKHMAVPRLFGDLRFVVIDEVHSLLRG 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP-------- 239 RG +ER+ L + +RIGLSAT+ AFL + P Sbjct: 164 DRGGQTLCLIERVSRLAGVNPRRIGLSATMGDPERTGAFLSLGTGRRTIIPRIQSKGSRW 223 Query: 240 --AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 ++ H ++ D+ ++ + A RE G + E R + +V Sbjct: 224 RLSLEHFYVKDTQAGEGRTDIKALPVLDEKTDTAPREADPG----LGYIFEHTRGKKCLV 279 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 F NSR E +T L + + + HHG Sbjct: 280 FVNSREECEGVTTSLRQYCELNHEADRFL---------------------------IHHG 312 Query: 358 SVSKEQRAITEQALKS-GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRA 416 ++S R E +K + V TS+LELGID+G ++ Q+ P +V+S LQR+GR Sbjct: 313 NLSASYRETAEMLMKDESKPLTTVTTSTLELGIDIGRLERAFQIDAPWTVSSFLQRMGRT 372 Query: 417 GHQV------------GGVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDV 463 G + + L L+ + +++ +E P + Sbjct: 373 GRRALPQEMWYVIREDEPEIRALLPATIPWKLLQACALIQLYLEERWVEPPRLDRLPFSL 432 Query: 464 LAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 L QT++ A+ + E SRV + + + L L Sbjct: 433 LYHQTMSVLASCGEMSPAELASRVLTLNYFHRITPDDYRVLLHHLI-------------- 478 Query: 523 LVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVY 580 + I G ++ + I Y V E ++ S+ +G + V Sbjct: 479 ----QTDHIQLTEKGGLIVGLAGERVINSFKFYGVFQESEEYTVRSESQELGTV----VA 530 Query: 581 ESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNG-RPAELGEMIGDFL 639 + I L WR+ ++ R + ++ ++P + GE G ++ + + L Sbjct: 531 PPPPGEKIALAGHVWRVLEVDRKRHLIY-CEMVKGKVPAYFGECPGDLHTKVLKRMRQVL 589 Query: 640 HLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG 677 + L + A G +E G Sbjct: 590 REDTLYPYLMKNAVSRLTQARCTATQSGAADENLIFLG 627 >UniRef50_B5IHC0 DEAD/DEAH box helicase domain protein (Fragment) n=5 Tax=Euryarchaeota RepID=B5IHC0_9EURY Length = 351 Score = 342 bits (876), Expect = 9e-92, Method: Composition-based stats. Identities = 132/387 (34%), Positives = 202/387 (52%), Gaps = 57/387 (14%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF + + T Q + ++ LV +PTGSGKTL AF+ ++ LF Sbjct: 16 LFDPIIGEWFTSKYSELTEPQAYAIPLIHSGKNVLVSSPTGSGKTLTAFISIINELF--- 72 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 +E +Y+SP+KAL D+ RNL++PL+ I D + +G +RV +R+G Sbjct: 73 -LLAKEGKLEDKVYCVYVSPLKALANDIHRNLEVPLEEIKDLAKSKGVKIPKIRVAVRSG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT ER K+ R PP I ITTPESL L+LT + RE+ R V VI+DE+H +A +KRG Sbjct: 132 DTSTAERQKMLRKPPHIFITTPESLSLVLTAPKFRESFRDVRYVIVDEIHELANNKRGVM 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIR 247 L+L+LERL L + QRIGLSAT ++A +L G R V++V + ++ Sbjct: 192 LSLNLERLQYLA-KNFQRIGLSATQAPIEEIAKYLVGYEGEEPRNVSIVEVEVRKKLDLK 250 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 ++ PV ++ V + + ++D + RHR+T++FTN+R E Sbjct: 251 VITPVEDLTLVPYEVA--------------NEKMYDVLVDIINRHRTTLIFTNTRSGTEH 296 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + +L E L+ +HHGS+SKE R Sbjct: 297 VAYKLKEKGIENLE--------------------------------AHHGSLSKETRLRV 324 Query: 368 EQALKSGELRCVVATSSLELGIDMGAV 394 E+ALK G+L+ V++++SLELGID+G + Sbjct: 325 EKALKEGKLKAVISSTSLELGIDIGYI 351 >UniRef50_Q049S7 Lhr-like helicase n=12 Tax=Bacteria RepID=Q049S7_LACDB Length = 744 Score = 342 bits (876), Expect = 9e-92, Method: Composition-based stats. Identities = 149/764 (19%), Positives = 263/764 (34%), Gaps = 119/764 (15%) Query: 15 FSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFRE 72 ++P +D+ + R ++ +Q V ++ + L+ A T SGKT AAF L L Sbjct: 7 YAPFIQDYIYSRGWETLRPLQTAAAQVIFDTDDNLLLSASTASGKTEAAFFPILTDLAEN 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + LYI+P+KAL D L+ +G ++ V Sbjct: 67 PA---------DSIACLYIAPLKALINDQYDRLKDICEG------------SDVPVWRYH 105 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAGSKR 189 GD A ++ K+ + P +L TPESL ++ ++ + + V+IDE+H+ S R Sbjct: 106 GDVSAAQKRKMFKRPQGVLQITPESLESLIINKHADIPRLFGDLRYVVIDELHSFLRSDR 165 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-----RPVTVVNPPAMRHP 244 G LERL+ L +RIGLSAT+ FLG R V + P H Sbjct: 166 GGQTFCLLERLNRLAGVKPRRIGLSATIGDPKAAGQFLGDGSGHQTRIPKVKSRPQRWHL 225 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + + S A + + + R + +VFTNSR Sbjct: 226 SMEHFYKSGDQAGDHSALPAQAVLDQASDQAPELADPGLAYIFDHTRGKKCLVFTNSREE 285 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 E + L + + + + HHG++S R Sbjct: 286 CEAVCQVLRQYCEYKHEPDRFM---------------------------IHHGNLSAALR 318 Query: 365 AITEQALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 E +K + AT++LELGID+G ++ Q+ P +V+ LQR+GR G + G Sbjct: 319 QGAEAIMKDEDSNITTCATATLELGIDVGQLERAFQIEAPFTVSGFLQRMGRTGRR-GNP 377 Query: 424 SKGLFFPRT-------------RRDLVDSAVIVECMFAG-RLENLTPPHNPLDVLAQQTV 469 ++ F R L+ +VE +E P +L QT+ Sbjct: 378 AEMWFVMREEQAESRAMLPVLLPWSLLQGIALVELYLQECWVEPPRDHQLPYSLLYHQTM 437 Query: 470 AAA-AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 + A + E SRV + ++ + + + L L + Sbjct: 438 STLMAGGEMSPAELASRVLTLSYFRWVSQDDYRVLLRHLI------------------KT 479 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYESRVND 586 I G ++ + + Y+V E A S +G + V + + Sbjct: 480 DQIQLTENGGLIVGLAGERVTNNFKFYAVFQENEEYSVHAESEELGTI----VKPPPLGE 535 Query: 587 IITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNG-RPAELGEMIGDFLHLLADG 645 I + W +++I R + V ++P + G+ G ++ + + L Sbjct: 536 KIAIAGHVWVVEEIDRRRRQVYV-HQVKGQIPAYFGDVAGDIHPKVLQQMRQILAEKRQY 594 Query: 646 AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY 705 + L+E +A G +P + + +G L Sbjct: 595 PYLMKNAAARLSETRAMAEAAG-----------LPDKQLI-------NLGAKTYCLFPWT 636 Query: 706 GRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 G + + + G I + ++G Sbjct: 637 GSYAFLALERFLRLKCASRLGLKNIDSVRPYYIQFSMDVSEGDF 680 >UniRef50_A4BLZ4 Lhr-like helicase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLZ4_9GAMM Length = 694 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 176/676 (26%), Positives = 267/676 (39%), Gaps = 106/676 (15%) Query: 13 DVFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 + PA + + + +Q ++ HAL+IAPT GKT AA L L R+ Sbjct: 13 ERLHPAVQYHIVNSLGWPALRPLQERSIAPVLDGHHALLIAPTAGGKTEAAMLPVLSRML 72 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 E + + +LYI PIKAL NL+ L +A + V + Sbjct: 73 SE---------EWRGLSVLYICPIKALLN----NLEARLSRLARL--------LGRTVQL 111 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGS 187 GD E+++ R PPDIL+TTPESL +L R+ LR GV V+IDE+HA AG Sbjct: 112 WHGDIGQGEKNRAQREPPDILLTTPESLEGILIGGRRDHLRLLGGVRCVVIDELHAFAGD 171 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG HL LER+ AL QRIGLSATV + +L A +R Sbjct: 172 DRGWHLLALLERIHALRGHEPQRIGLSATVGEPHALLNWLAAH--------CAGERSLVR 223 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + VP +D A ++ + R +VF +SR E+ Sbjct: 224 VQVPPTEVDLCVDYAGSLRN--------------AAILISRLHRGEKRLVFCDSRSRVEE 269 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L+ L L DVF++ H ++S + R Sbjct: 270 LSIALRAL------------------------------GVDVFVS---HAALSVDTRRQA 296 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 EQA + +VATS+LELG+D+G +D VIQ+ P SVAS LQR+GR G + L Sbjct: 297 EQAFAERQNCVIVATSTLELGLDVGDLDRVIQIDAPGSVASFLQRLGRTGRRADSRRNLL 356 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE--WYSR 485 F L++S I + +G +E + P P ++ QQ A +L+++E + + Sbjct: 357 FIATRDAGLLESLAIAQLFESGFVEPVVGPPMPCHLVVQQLFAMLFQHSLELEERVFTTT 416 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 +RR + L +D + L R R +L P A+ + Sbjct: 417 LRRIPGFAGLIDAHWDELREHLLARG------------FLIRNGLLLALGPKAERAFL-- 462 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVN-DIITLGATSWRIQQITRDQ 604 G + D + G++ +G +D + R ++ LG SWR+ + Sbjct: 463 GRGLADLCVSFDSPQLFTAFHGNKLLGHVDPLSLSWRRDGPTVLALGGRSWRVVSTDWTR 522 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 V W GE G + E + L + L + + + Sbjct: 523 DRVYVEAADEKGTSRWLGESRGVSRVIAEQVRRIL--------AAPPADSTLLTKRSSSR 574 Query: 665 IQGLIEEQRNATGIVP 680 I L Q + + P Sbjct: 575 IAELCAAQEDTLSLTP 590 >UniRef50_P32639 Pre-mRNA-splicing helicase BRR2 n=6 Tax=Saccharomycetaceae RepID=BRR2_YEAST Length = 2163 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 120/592 (20%), Positives = 216/592 (36%), Gaps = 69/592 (11%) Query: 21 DWFLRAF-----KQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGG 74 DW AF +Q + +H A + + L+ APTGSGKT A L L L Sbjct: 485 DWCQEAFPSSETTSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLKALSHHYN 544 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 T++ + +I+YI+P+KAL + R Q L + ++V TGD Sbjct: 545 PKTKKLNLS-AFKIVYIAPLKALVQEQVREFQRRLAFL------------GIKVAELTGD 591 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAGSKRGAHL 193 + + + +L++TPE + + + V +IIDE+H + RG L Sbjct: 592 SRLSRKQ---IDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDD-RGPVL 647 Query: 194 ALSLERL---DALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + IGLSAT+ + DV FL + + R Sbjct: 648 ESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRP------- 700 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 +S G E + + ++ +L+ + IVF +SR + Sbjct: 701 -----CPLSQQFCGIKERNSLKKLKAMNDACYEKVLESINEGNQIIVFVHSRKETSRTAT 755 Query: 311 RLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L +A DA + + ++ +HH +++ R++ Sbjct: 756 WLKNKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTRSDRSL 815 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------LSVASGLQRIGRA 416 +E G L+ +V T++L G+++ A ++I+ V +P LS LQ +GRA Sbjct: 816 SEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRA 875 Query: 417 GH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + +G+ +++ + +E F + L N V Sbjct: 876 GRPRYDTFGEGIIITDQSNVQYYLSVLNQQLPIESQF---VSKLVDNLNAEVVAGNIKCR 932 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK--LVWNRE 528 A++ L Y R+ + +P D L + + ++++ E Sbjct: 933 NDAVNWLAYTYLYVRMLASPMLYKVPDISSDGQLKKFRESLVHSALCILKEQELVLYDAE 992 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGM--YSVLLPEGEEKAGSRRVGELDEEM 578 ++ A L + S I M Y+ L E + R+ + EE Sbjct: 993 NDVIEATD---LGNIASSFYINHASMDVYNRELDEHTTQIDLFRIFSMSEEF 1041 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 77/514 (14%), Positives = 164/514 (31%), Gaps = 63/514 (12%) Query: 5 PDPSSLLPDV---FSPATRDWFLR--AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKT 58 P P+ LL ++ S D F FK +Q Q + S + V + G+GKT Sbjct: 1318 PPPTPLLENISISTSELGNDDFSEVFEFKTFNKIQSQVFESLYNSNDSVFVGSGKGTGKT 1377 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 A L L+ + G R +YI+P + + + + Sbjct: 1378 AMAELALLNHWRQNKG------------RAVYINPS-----------GEKIDFLLSDWNK 1414 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVI 177 R ++ + G+ P+ L ++ +L+ TP L+ R R+ ++ +E +I Sbjct: 1415 RFSHLAGGKIINKLGNDPSLNLKLLAKS--HVLLATPVQFELLSRRWRQRKNIQSLELMI 1472 Query: 178 IDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 D+ H ++ GA + R+ + L + + LS + +A D + G + Sbjct: 1473 YDDAHEISQGVYGAVYETLISRMIFIATQLEKKIRFVCLSNCLANARDFGEWAGMTKSNI 1532 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 P+ R + I + + H S+ S Sbjct: 1533 YNFSPSERIEPLEINI------------QSFKDVEHISFNFSMLQMAFEASAAAAGNRNS 1580 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 + VF SR ++ + + ++ ++ + T +++ Sbjct: 1581 SSVFLPSRKDCMEVASAFMK-FSKAIEWDMLNVEEEQIVPYIEKLTDGHLRAPLKHGVGI 1639 Query: 355 HHGSVSKEQRAITEQALKSGELRCV--------VATSSLE---LGIDMGAVDLVIQVATP 403 + ++ I ++ + G + + A + E LG ++ D P Sbjct: 1640 LYKGMASNDERIVKRLYEYGAVSVLLISKDCSAFACKTDEVIILGTNL--YDGAEHKYMP 1697 Query: 404 LSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDV 463 ++ L+ +G A K L ++E + + Sbjct: 1698 YTINELLEMVGLASGNDSMAGKVLILTSHNMKAYYKKFLIEPLPTESYLQYIIHDTLNNE 1757 Query: 464 LAQQTV--AAAAMDALQVDEWYSRVRRAAPWKDL 495 +A + +D +Y R+ + + Sbjct: 1758 IANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGV 1791 >UniRef50_A6QZE8 Putative uncharacterized protein n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6QZE8_AJECN Length = 1597 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 121/583 (20%), Positives = 214/583 (36%), Gaps = 68/583 (11%) Query: 4 NPDPSSLLPDVFSPA--TRDWFLRAFK---QPTAVQPQTWHVAARSE-HALVIAPTGSGK 57 P P + P DW F+ + +Q + + A + + LV APTGSGK Sbjct: 168 APKPKKDPSERLIPISDLPDWARAGFRNSQKLNRIQTKCFPTAFNDDGNMLVCAPTGSGK 227 Query: 58 TLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T A L L + + +T E +I+YI+P+KAL + N LK Sbjct: 228 TNVAMLTILREIGKNRNPETGEIMLDD-FKIVYIAPLKALVQEQVGNFGERLK------- 279 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETV 176 +RV TGD ++ +K I++TTPE ++ R V + Sbjct: 280 -----PYGIRVSELTGD---RQLTKQQIADTQIIVTTPEKWDVITRKATDTSYTRLVRLI 331 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPV 233 IIDE+H + RG L + R + + IGLSAT+ + DV +FL D Sbjct: 332 IIDEIHLLHDD-RGPVLESIVSRTIRKIEQTGDPVRLIGLSATLPNYRDVGSFLRVDPIN 390 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 + + P P+ G + + ++ T +L++V ++ Sbjct: 391 ALFHFDGSYRP-----CPLKQE------FIGVTDKKAIKQLKTMNDVCYTKVLEQVGTNK 439 Query: 294 -STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH----FESTSGATSNRVQSSD 348 ++F +SR K + + + DAA E ++ Sbjct: 440 NQMLIFVHSRKETAKTARYIRDKAVEMETIGQILRSDAASQAILAEEADAVNDPALKDLM 499 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-- 403 + HH +S R ++ G L+ +V T++L G+++ A ++I QV +P Sbjct: 500 PYGFGIHHAGMSLADRTSVQELFADGSLQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEK 559 Query: 404 -----LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLE 452 LS LQ +GRAG Q +G+ L++ + +E +L Sbjct: 560 GSWVELSPQDVLQMLGRAGRPQYDTFGEGIIITSQTEMQYYLSLLNQQLPIESQLMSKL- 618 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL-PRRVFDATLDM--LSG 509 N VL +D L + R+ R+ + D L+ + Sbjct: 619 --ADNLNAEIVLGNVRNRDEGVDWLGYTYLFVRMLRSPGLYSVGTDYENDEALEQRRVDL 676 Query: 510 RYPSGDFSAFRPKLVWNRETGILTARPGAQL---LAVTSGGTI 549 + + + ++++ G L + ++ +T I Sbjct: 677 IHSAATVLEKANLVKYDKKLGRLQSTEFGRIASHYYITHSSMI 719 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 92/547 (16%), Positives = 186/547 (34%), Gaps = 66/547 (12%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 + VQ QT+ ++ + + APTGSGKT+ A L + Sbjct: 791 WDHFNKVQTQTFKSLFDTDDNVFLGAPTGSGKTVCAEFALLHHWSKSTPG---------- 840 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 + +YI+P + L + D + R + TG+T A + Sbjct: 841 -KAVYIAPFQELVD----------HRVTDWQTRLSNLNGGKAILKLTGETTADLK---IL 886 Query: 146 NPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 D+++ TP + +L+ + R ++ VE I DE+H + G + G + + R+ + Sbjct: 887 EQADLVLGTP-IQWDVLSRQWQRRRNVQAVELFIADELHML-GGQGGYIYEVVVSRMHYI 944 Query: 204 ---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 + IGLS + +A D+ +LG + P +R + + + ++ S Sbjct: 945 ALQTEKELRMIGLSVPLSNARDIGEWLGAKKHTIYNFSPHVRPVPLELHIQSYSIPHFPS 1004 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 + + + + ++ + T+VF +R L A Sbjct: 1005 LMLAMAKPAFTS-------------ILQLSPDKPTLVFVPTRKQTRSTALDLLAACIAAD 1051 Query: 321 QRSPSIAVDAAHFESTSGATSNR-VQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 + D + + S +H ++S + I K G ++ + Sbjct: 1052 DEDRFLHADIGEISPLLKRIDEQALAESISHGIGYYHEALSNSDKRIVTHLFKLGAIQVM 1111 Query: 380 VATSSLELGIDMGAVDLVI----------QVATPLSVASGLQRIGRAGHQVGGVS--KGL 427 +A+ + I+ A +++ ++ LQ G+A + S L Sbjct: 1112 LASRDVCWEINFNAHLVIVMNTQFFDGREHRYIDYPISEILQMFGKASRPLEDSSGKGVL 1171 Query: 428 FFPRTRRD----LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 P +RD ++ A+ +E L + +A A+D + +Y Sbjct: 1172 MVPAVKRDYYKKFLNEALPIESHLQIYLHDAFVAEISTRTIA---STQDAVDWMTYTYFY 1228 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV-WNRETGILTARPGAQLLA 542 R+ + L + LS S K++ + E L+ A + A Sbjct: 1229 RRLLANPSYYGLTDVSHEGLSTFLSELVESTLKELSEAKIIDLDEEDDTLSPLNAAMIAA 1288 Query: 543 VTSGGTI 549 + I Sbjct: 1289 YYNISFI 1295 >UniRef50_C7RDI1 DEAD/DEAH box helicase domain protein n=3 Tax=Anaerococcus RepID=C7RDI1_ANAPD Length = 696 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 158/719 (21%), Positives = 268/719 (37%), Gaps = 129/719 (17%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARSEHALV-IAPTGSGKTLAAFLYALDRLFR 71 + S R++ + + T +Q + +E L+ IAPT +GKT AAFL A+ + Sbjct: 7 LLSRPMREFVYKNKWPSLTKIQKASIREFYETEDNLIFIAPTAAGKTEAAFLPAISK--- 63 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 K RILYISP+ AL D + + I + V Sbjct: 64 -------ANEFDKGLRILYISPLIALINDQFKRVFAMCDEI------------GISVTSW 104 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSK 188 G+ + KL NP I + TPESL + ++ AR+ G++ +I+DE+H+ Sbjct: 105 HGEANQTRKEKLLENPSGICLITPESLEAIFVNKSLEARKLFTGLDYIIVDEIHSFLTGN 164 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVR--SASDVAAFLGGDRPVTVVNPPAMRHPQI 246 RGA L L+R+ A + + IGLSATV + F +R ++ + + Sbjct: 165 RGAQLRSLLKRILAYTEKNPRFIGLSATVGDLNYHICKGFFKNNRETKLIVDSSKNELEA 224 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR---HRSTIVFTNSRG 303 I + +I +D++L S + F NSR Sbjct: 225 TISYDEED-------------------------HISDKTVDQILSFASDGSMLAFPNSRK 259 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 L E+L +L + + SHH SVSK + Sbjct: 260 LVEELAVKLKKKASEE---------------------------QVNTQIFSHHSSVSKNK 292 Query: 364 RAITEQALKS--GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 R E K+ GE + ATS+LELGID+G+V + Q + S+ S QR+GR+G + G Sbjct: 293 RKEIEDFAKNREGENFIICATSTLELGIDIGSVYSICQYGSTFSILSLAQRLGRSGRKTG 352 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 S DLV S + GRL+ + P P DV A Q ++ + E Sbjct: 353 K-SILHQIATNPWDLVQSLATIILFKEGRLDKIYPIKCPYDVFAHQILSTLLENNGLSIE 411 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 YS + + + D+ F + + + + +L N G + ++ Sbjct: 412 DYSVLDKKLDF-DIDHEEFMELTEHMIEK-------GYIERLE-NEYIGGIECEKLLKMG 462 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT 601 + + + + V +G ++GE+++ + + D I LG W +Q I Sbjct: 463 SFYNQFI--SKDNFHVFNDKG-------KIGEIEKS--IDLKKGDGIYLGGLIWEVQSIN 511 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT 661 +T + P + G ++ + I + + + Sbjct: 512 LRAKKITVTKAEDGKAPDF---GASSQEDISDEIRRKMEEI--------------IGKRA 554 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + I E ++ I P L +D G L + G R++ + + R Sbjct: 555 KYSFNDKINEVIDSLNISPDKEGFYLINDKDGQG-----LRTFRGTRINRTLTLILNIR 608 >UniRef50_Q9UT24 Pre-mRNA-splicing factor brr2 n=5 Tax=Fungi/Metazoa group RepID=BRR2_SCHPO Length = 2176 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 132/566 (23%), Positives = 225/566 (39%), Gaps = 75/566 (13%) Query: 21 DWFLRAF---KQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 +W +AF + +Q + +A + E+ L+ APTG+GKT A L L+ L + ED Sbjct: 508 EWSHQAFLNTQSLNRIQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILNELQKHLRED 567 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 + + +I+YI+P+KAL ++ N L T N+RV TGD Sbjct: 568 L--SFNLQNFKIVYIAPLKALVQEMVNNFSKRL------------TPYNIRVAELTGD-- 611 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVAGSKRGAHLA 194 + +K + I++TTPE ++T +A + + V VIIDEVH + +RG L Sbjct: 612 -SQLTKQQISETQIIVTTPEKWD-IITRKANDLSYVNLVRLVIIDEVHLLHD-ERGPVLE 668 Query: 195 LSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 + R+ + +GLSAT+ + +DVA+FL D + + P P Sbjct: 669 SIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTYRP-----CP 723 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + G E + R + ++ ++ ++F +SR K Sbjct: 724 LKQE------FIGITEKTPFKRMQTTNEACYEKVMQHAGKN-QVLIFVHSRKETAKTARF 776 Query: 312 LNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + + + DAA E + ++ + HH + +E R + Sbjct: 777 IRDKALEEETIGHLLRSDAASREILRAEADSTSDENLKDLLPYGFAIHHAGMRREDRQTS 836 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRAG 417 E G ++ +V+T++L G+++ A ++I QV +P LS LQ +GRAG Sbjct: 837 EDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAG 896 Query: 418 H-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 Q +G+ L++ + +E F RL + N L Sbjct: 897 RPQFDTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRLADCL---NAEVSLGTVRSIE 953 Query: 472 AAMDALQVDEWYSRVRRAA------PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW 525 +D L Y R+ R+ P D + + D+L + LV+ Sbjct: 954 DGVDWLGYTYLYVRMLRSPALYSVGPEYDDDKYLVQKRADLLHSAAILLEKCKL---LVY 1010 Query: 526 NRETGILTAR---PGAQLLAVTSGGT 548 NR++G LTA A VT Sbjct: 1011 NRQSGTLTATELGKVAASYYVTHNSM 1036 Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats. Identities = 102/578 (17%), Positives = 202/578 (34%), Gaps = 96/578 (16%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAA 61 +NP SL P+ FK +Q Q ++ ++ + + AP GSGKT+ A Sbjct: 1351 NNPSFISLYPN-------------FKFFNKIQTQVFNSVYKTNDSVFIGAPNGSGKTVCA 1397 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 L L +E +YI+PI+ + + D Sbjct: 1398 ELALLHHWSQEDYG-----------TAVYIAPIQEIVDRRYEEWYGKFSDLGD------- 1439 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET--LRGVETVIID 179 + TG+ + D++ TP S + L+ R R ++ V+ I D Sbjct: 1440 ---GKVLVKLTGERSQDLK---LIQVADLIFCTP-SQWDSLSKRWRSMRSIQKVDFYICD 1492 Query: 180 EVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 E+ + G G + + R+ + L + + +GLS +V +A D+ +LG Sbjct: 1493 ELQLL-GGFYGPLYEIVISRIRYMAVQLEKNIRVVGLSVSVANARDLGEWLGTSPQCIFN 1551 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 P R + I + ++ S+ ++ I + + + + +STI Sbjct: 1552 FSPKDRPNPLTIHLQSFSITHFPSL------------MLAMSKPIYRSLKNFISQRKSTI 1599 Query: 297 VFTNSRGLAEKLTARLNEL-YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 VFT R +A++L L A + S+ + A + A ++ +I+ Sbjct: 1600 VFTPDRKVAKQLAFDLVTFSMADEDEYLFSLMENEAFNKVEDAALQQSLKHGIAYISEI- 1658 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATS----SLELGIDMGAVDLVIQVATPLS------ 405 S + I + + G ++ ++A+ SL+ + VI + T Sbjct: 1659 ---TSSNDQNIVQYLYRHGLIKVLIASRDVIYSLKA-----KSNAVIVMGTQYYDGKEHR 1710 Query: 406 -----VASGLQRIG-RAGHQVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENL 454 ++ LQ +G A +S+ + T + ++ + +E L + Sbjct: 1711 YIDYPISELLQMLGFTASIGSSELSQVILMTVTTKKEYYKKFLNEPLPMESHLQVWLHDA 1770 Query: 455 TPPHNPLDVLAQQTV--AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 ++ QT+ A+D L Y R+ + L ++ + LS Sbjct: 1771 FVSE-----ISTQTIESKQDAVDWLTWSYMYRRLVANPAYYGLQDITHESVSEFLSDLVE 1825 Query: 513 SGDFSAFRPKLV-WNRETGILTARPGAQLLAVTSGGTI 549 + +L+ + E A A + + I Sbjct: 1826 TTMNDLSEARLITVDDEDDSCVALNLAMIASHYGITYI 1863 >UniRef50_B0C714 DEAD/DEAH box RNA helicase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C714_ACAM1 Length = 733 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 143/681 (20%), Positives = 253/681 (37%), Gaps = 98/681 (14%) Query: 15 FSPATRDWFL-RAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFRE 72 P + W + + +Q + ++ A T GKT AAFL +L + Sbjct: 12 LHPRVQQWIASKKWPSLREIQELAIPPILAGDKDVIITAATAQGKTEAAFLPVFSQLVDQ 71 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 K +++ + P+KAL D R L +++ V Sbjct: 72 PA---------KGIQVIGLGPLKALINDQHRRLSAI------------GDCLDVPVCPWH 110 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAGSKR 189 GD + + +L + P +L+ TPESL + R +E + ++IDE+H+ +R Sbjct: 111 GDIGSGPKQRLLKQPAGVLLITPESLEALFVLRGQELNRLFASLSYIVIDEMHSFISIER 170 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV-VNPPAMRHPQIRI 248 G L ++R++ ++ RIGLSAT+ S A FL + V + + ++++ Sbjct: 171 GRQLQSLMQRVEQVVGRPVPRIGLSATLGDMSLAAEFLRPGQQERVQLVQSFAKGDELKL 230 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + E + I + L + LR ++F NSR E+ Sbjct: 231 QLRGYRSSPTPDPDEEEDETTPPPDALDIAQH-----LFQSLRGEKNLIFINSRRQVERY 285 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L L A + + HHGS+SKE RA E Sbjct: 286 ADILRNLSAEYRVPNEFM---------------------------PHHGSLSKELRAEAE 318 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 +ALK V+ T +LE+GID+GAV + Q+ P SVAS QR+GR+G + G + Sbjct: 319 EALKRDHPVNVICTMTLEMGIDVGAVQSIAQIGPPSSVASTRQRLGRSGRRAGDPAIMRV 378 Query: 429 FPRTRR-------------DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 + + DLV + I+ + G E + L QQ +++ A Sbjct: 379 YVSVPQLDSYTSPEQALYPDLVQAIAIINLLLEGWYEPPIAGRLHISTLIQQLLSSIAQQ 438 Query: 476 -ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 ++ D+ + A P++++ + +F L L R + +++ +L Sbjct: 439 GGIRADQAWHDFCEAGPFQEMEQGLFIKLLRCL----------GERDLIQQSQDGLLLLG 488 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVL--LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 G +L + Y+ E +G L M ++ Sbjct: 489 LKGERL--------VNHYTFYTAFSTTEEYRISTPENVLGTLPTSMPIAEE--MVLLFAG 538 Query: 593 TSWRIQQITRDQ--VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG 650 W++Q + ++ V+V PA G + P + G + + + + + Sbjct: 539 RRWQVQSVDSEKQVVMVVPADGE-GQAPRFGGSSGFVHDRVRQTMREIYRSTDMPVYLDD 597 Query: 651 TIPPWLAEENTIANIQGLIEE 671 T L E T GL +E Sbjct: 598 TAKTLLKEARTQFRDCGLDQE 618 >UniRef50_A4FJZ7 Putative ATP-dependent helicase n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FJZ7_SACEN Length = 764 Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 164/689 (23%), Positives = 249/689 (36%), Gaps = 110/689 (15%) Query: 15 FSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 P + ++ +Q + AL++APT GKT AA L + Sbjct: 23 LHPVLTHHIVNTLGWRSLRPLQREAIDPVLDGSDALLLAPTAGGKTEAACFPLLSAM--- 79 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E H +LY+ P+KAL +++ L + RVGI Sbjct: 80 ------ETHAWSGVSVLYVCPLKALLNNLEHRLDTYTSWLGR------------RVGIWH 121 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSKR 189 GD A R +L R+PPD+L+TTPESL ML S R G+ + +DEVH+ AG R Sbjct: 122 GDVAAGARQRLLRDPPDVLLTTPESLEAMLVSTKVDHRTLFGGLRAIAVDEVHSFAGDDR 181 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL----GGDRPVTVVNPPAMRHPQ 245 G HL LERL + QR+GLSATV + ++ +L G RP VV P + Sbjct: 182 GWHLLAVLERLMRVAGRPIQRVGLSATVGNPHELLYWLQGSRRGARPGAVVAPGVLNGGH 241 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETG--------------------- 284 + + + T + G + E Sbjct: 242 ATPPGTTSPTLEQEKSSISTNATGNTGPTRMMSSAEEAAATSNVVQRVPPPGDIELDYVG 301 Query: 285 -------ILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS 337 ++ + R +VF +SR L E+L A L Sbjct: 302 SVDNAATVIAALHRGEKRLVFCDSRQLVEELGASLRSRGVTTFLS--------------- 346 Query: 338 GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 H S+S ++R E+A +V+TS+LELGID+G +D V Sbjct: 347 ------------------HASLSLDERRRAEEAFADARDCVIVSTSTLELGIDVGDLDRV 388 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 IQ+ P +VAS LQR+GR+G + G LF + L+ SA ++E G +E +T P Sbjct: 389 IQINAPTTVASFLQRLGRSGRRPGSTRNCLFLALRKDALLWSAALLELWGRGYVEPVTAP 448 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 P ++AQQ +A D +S W L FD T + + F Sbjct: 449 PEPRHIVAQQLLALCLQHNAVGDALWSE-----EWNGLAP--FDRTAEPVLRHLLREGFV 501 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 +++ G R + + ++VL G R +G D Sbjct: 502 ERDGPMLF---IGPEAERRFGRRHFMDMTAVFTAPPQFTVL-------EGRREIGHTDSA 551 Query: 578 MVYESRVND-IITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRG-EGNGRPAELGEMI 635 ++ E ++ LG SW++ I W+ G L + Sbjct: 552 LLTEKVEGPRLLLLGGRSWKVTSIDWKTRRCYVESADKGGRARWQSFGAGGVGFALAQAA 611 Query: 636 GDFLHLLADGAFFSGTIPPWLAEENTIAN 664 D L + L E + Sbjct: 612 RDVLLGAVPPIALTQRAQRVLVELRETRS 640 >UniRef50_A4TAT7 DEAD/DEAH box helicase domain protein n=4 Tax=Actinomycetales RepID=A4TAT7_MYCGI Length = 696 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 164/636 (25%), Positives = 245/636 (38%), Gaps = 103/636 (16%) Query: 13 DVFSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLF 70 D P + + Q A+V+APT GKT AA L R+ Sbjct: 5 DRLHPGVQYHLANTLRWNGLRPTQAAAVEPVLAGSDAVVLAPTAGGKTEAAMFPLLSRMA 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 E + +LY+ P++AL NLQ + G + + Sbjct: 65 TEDWQ---------GVSVLYVCPLRALLN----NLQPRIDGYCRW--------LGRSAAV 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGS 187 GD ++R K+ + PD+L+TTPESL ML S R G++ V++DE+HA AG Sbjct: 104 WHGDVSQEQRQKILVDRPDVLLTTPESLEAMLVSTKVDPRVLFSGLQAVVVDEIHAFAGD 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG HL LERL + QRIGLSATV + +D+ A+L G A Sbjct: 164 DRGWHLLAVLERLSRVAGRELQRIGLSATVGNPTDLLAWLQGSFHTRTSAVVAPA----- 218 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + P A V V S T ++ + +VF +SR AE+ Sbjct: 219 VETPAAPDITVDYVGSLTN---------------AATVIASLHAGEKRLVFVDSRRQAEE 263 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L A L +L H S+S +R + Sbjct: 264 LGAALRDLDIETYIS---------------------------------HSSLSAAERRRS 290 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E A +VATS+LELGID+G +D VIQ+ + +VAS LQR+GR G + L Sbjct: 291 EAAFADARDTVIVATSTLELGIDVGDLDRVIQINSTRTVASFLQRLGRTGRRPSSSRNCL 350 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD-ALQVDEWYSRV 486 F ++ ++ +++ G +E +TPP +P + AQQ +A + V EW Sbjct: 351 FLCLDDEAVLLASGMLQRWSQGWVEPVTPPPHPRHIAAQQLMALCLQQHRIGVAEWTQW- 409 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 W DLP D ++L G F+ P L E R + Sbjct: 410 -----WGDLPVFD-DTAPEILEYLVAEGYFATDGPFLHIGPEA----ERRFGRRYF---- 455 Query: 547 GTIPDRGMYSVLL--PEGEEKAGSRRVGELDEEMVYESRVND-IITLGATSWRIQQITRD 603 + +V PE AG VG + +++ ES ++ LG SW++ I + Sbjct: 456 -----SDLTAVFTAPPEFIVLAGRVEVGTIGTDLLTESVEGPRLLLLGGRSWKVTHIDWE 510 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL 639 + W G G E+ + + L Sbjct: 511 RRRCFVEAVDGGGKAKWSGVPGGLSHEVTRGMREVL 546 >UniRef50_C4QXA9 RNA-dependent ATPase RNA helicase (DEIH box) n=1 Tax=Pichia pastoris GS115 RepID=C4QXA9_PICPG Length = 2147 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 121/593 (20%), Positives = 222/593 (37%), Gaps = 70/593 (11%) Query: 22 WFLRAFK-----QPTAVQPQTWHVAAR-SEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 W +AF +Q + + +A + E+ L+ APTGSGKT A L L + + + Sbjct: 478 WAQQAFPNSETLTLNRIQSKVYPIAFKEDENILLCAPTGSGKTNVALLTILRTISKFRNQ 537 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 DT K +I+YI+P+KAL + R Q ++VG TGD Sbjct: 538 DTGTLALNK-FKIVYIAPLKALVQEQVREFQRRFD------------SFGIKVGELTGD- 583 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAGSKRGAHLA 194 +K IL+TTPE ++ + +R V +IIDE+H + +RG + Sbjct: 584 --SNLTKHQIKSTQILVTTPEKWDIITRKMSDISYVRLVRLLIIDEIHLLHD-ERGPVIE 640 Query: 195 LSLERLDA----LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + + +GLSAT+ + +DVA FL D + P Sbjct: 641 SIVSRSIRNDEISGNEPVRLVGLSATLPNFNDVATFLRVDESKGLFYFDGSYRP-----C 695 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+A G E R ++ ++D + IVF +SR K Sbjct: 696 PLAQQ------FVGILEKKALKRYQAMNQACLDKVIDNLQGDHQIIVFVHSRVDTAKTAR 749 Query: 311 RLNELYAA----RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L E +A L + + E + +S +++ V HH ++K+ R++ Sbjct: 750 YLMENLSACNKLDLLQKTDLGSKEILREESKSFSSEDLRNLVVSGIGIHHAGLNKQDRSL 809 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVA----------SGLQRIGRA 416 E G ++ +V+T++L G+++ A ++I+ + S LQ +GRA Sbjct: 810 VEDLFADGYVQVLVSTATLAWGVNLPAHTVIIKGTSVYSPEKGVWSQLAPQDILQMLGRA 869 Query: 417 GH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + +G+ +++ + +E ++ + N VL T Sbjct: 870 GRPRYDKTGEGIIITVQEEVQYYLAILNQQLPIESQLMSKIHDCL---NSEIVLGTVTSR 926 Query: 471 AAAMDALQVDEWYSRVRRAAP-WKDLPRRVFDATLDMLSGRYPSGDFSAFRP--KLVWNR 527 A+ + R+ R+ + P D TL + + + + ++ Sbjct: 927 QEAVSWFSYSYLFVRMLRSPALYHVGPEYSQDKTLLEMRLDICHSALTQLQKNGLISFDP 986 Query: 528 ETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM 578 +G + ++ TI +++ L R+ E Sbjct: 987 LSGKVWPNYLGRISSYFYIDHSTI---SLFNKFLKPYSTDIDLLRIFSQSSEF 1036 Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats. Identities = 89/542 (16%), Positives = 182/542 (33%), Gaps = 96/542 (17%) Query: 3 DNPDPSSLLP-----DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSG 56 P P +P ++ P R F F+ Q + ++ ++ AL+ A G G Sbjct: 1309 RPPTPLEEVPLIPVHNLNLPECRTVFD--FEFFNKFQTRVFNSVFETDASALICANKGCG 1366 Query: 57 KTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER 116 KT+ A L AL RL+ G R +Y+SP + I Sbjct: 1367 KTVIAEL-ALLRLWCSGNG-----------RAIYVSP-----------CDATIAKIYKIW 1403 Query: 117 RRRGETEVNLRV-GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVE 174 RR+ ++ +V + TG+ + + + D+++ TP L + + R ++ +E Sbjct: 1404 RRKFKSVAGGKVIKVLTGELNSDLK---LLSISDVILATPAHLDQLCRRWKNRSVVQSIE 1460 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDR 231 V+ D+ H V G ++L R+ + L + +GLS + A D ++LG + Sbjct: 1461 LVVADDCHTVGNGYNGFIYEVALSRIRIMAIQLSKPIRIVGLSNPLARADDFGSWLGVEI 1520 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 R + I + +++ + I ++ G + Sbjct: 1521 DHNYNFDSKERIAPLEIEIKSSDIKE---------------NHSMILAMLKIGFQAISDK 1565 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAAR-LQRSPSIAVDAAHFESTSGATSNRVQSSDVF 350 S++VF L ++ L L+ R S + +G R++ Sbjct: 1566 FGSSVVFLPDTELCFEVGQELLTLFRKRNYNGSSQKFQPPVDSKHLAGIRDVRLKHLISQ 1625 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGL 410 + ++ + E + G L+ ++ + D+V +A P A + Sbjct: 1626 GIGILYQGIAGNDQNTIENLYELGCLKVIIC-----------SRDVV-SLAPPCDFACVM 1673 Query: 411 QRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF-----AGRLE-------NLTPPH 458 G Q + + + D+++ + +G+L+ P Sbjct: 1674 ------GTQFYEGREHRYIDYSISDILEMVGVSSLQALIVTNSGKLDYYTKFLSEPLPVE 1727 Query: 459 NPL-----DVLAQQTVAAA------AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 + L D + +D L +Y R++ + + + L Sbjct: 1728 SHLSLFLTDAFVNEISCQVVRNRQDCIDWLTYTFFYRRLQLNPSYYGVTDVSSVGLSEYL 1787 Query: 508 SG 509 S Sbjct: 1788 SE 1789 >UniRef50_B5CL83 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B5CL83_9FIRM Length = 910 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 134/633 (21%), Positives = 234/633 (36%), Gaps = 102/633 (16%) Query: 11 LPDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 P+ P D+ + + + Q + + A E ++ T SGKTL+ L L ++ Sbjct: 25 FPESMRPEIGDYLRSQGISRLYSHQAEMFVRAGEGESLVITTATASGKTLSFLLPVLQQI 84 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 +R ++I P KAL +D R L L+ + R + G Sbjct: 85 LE-----------NPLTRAIFIYPTKALASDQYRVLAPVLEYFGEGR---------ISAG 124 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET-----LRGVETVIIDEVHAV 184 + GDT ERS++ R +I++T PE L + + ++IDE+H+ Sbjct: 125 VYDGDTMPAERSRV-RKSANIILTNPEMLNAAFLPNHSKYGFDFIFANLNYIVIDELHSY 183 Query: 185 AGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 G+ G HLA R+ + H+ Q + SAT+ + ++A + G P + + Sbjct: 184 RGA-FGGHLANIFRRMKRICGYYHSDPQFLCSSATIANPVELAEKICGITPGLIERDGSP 242 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 ++ ++ + G + S ++ I V + +VFT+S Sbjct: 243 APEKVYKILQPPEIK---------GANDKVYGRYSASSVVKELIPKLVEKGEQFLVFTHS 293 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R E + + ++ A F G T + G + Sbjct: 294 RRAVEVI------------LKESRDRLEDAGFLGEKGQTDK---------IAGYRGGYTP 332 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 +R E+ + +GEL ++ T++LELGID+G +D + V P + AS Q+ GRAG Sbjct: 333 LERREIERKMMAGELTGLICTNALELGIDIGKLDCTVLVGYPGTRASFWQQTGRAGRCGR 392 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLAQQTVAAAAMDALQVD 480 L D A+ + +F GR EN + P N L LA AAAA L +D Sbjct: 393 RCVNYLILENQPFDQY-IAISPDWLFEGRSENAIVDPDNLLIELA-HIRAAAAEMPLSLD 450 Query: 481 EWYSRVRRAAPWKDL----PRRVFDATLDMLSGR-------YPSGDFSAFRPKLVWNRET 529 + A + DL P + L L+GR +P+GD+S Sbjct: 451 DV-------ALFPDLGEIIPVLLNAQELKSLAGRFSWAGPAFPAGDYSL----------R 493 Query: 530 GILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY-ESRVNDII 588 + R + + +V + + E+DE + E + Sbjct: 494 NMDRTRYKLIIYPSM-------EHLRNVQEKRKGSLFNGKEITEMDESQAFHELHPGAVY 546 Query: 589 TLGATSWRIQQIT--RDQVIVTPAPGRSARLPF 619 + + ++ + P G +P Sbjct: 547 LHDGEQYEVLKLDLVSRTALAVPFYGNYYTVPS 579 >UniRef50_D0NTD6 Pre-mRNA-splicing helicase BRR2, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTD6_PHYIN Length = 2293 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 125/566 (22%), Positives = 217/566 (38%), Gaps = 65/566 (11%) Query: 21 DWFLRAFK---QPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 W AFK VQ + + A ++ E+ L+ APTG+GKT A L L + + + Sbjct: 535 KWAQGAFKGMESLNRVQSKMFPAAFKTSENLLLCAPTGAGKTNVAMLTILHEVMKARDPE 594 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 T E + +I+Y++P+KAL +V NL L + ++V +GD Sbjct: 595 TGEIDLN-SFKIVYVAPMKALVQEVVLNLSARLS-----------SAYGIQVRELSGD-- 640 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLA 194 Q S+ I++TTPE ++ R + V VIIDE+H + + RG L Sbjct: 641 -QNLSREQLFNTQIIVTTPEKWDIITRKSGDDRTYTQLVRLVIIDEIHLLHDT-RGPVLE 698 Query: 195 LSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 + R + +GLSAT+ + DVAAFL D + + P VP Sbjct: 699 ALVARTIRNVEATQQMVRLVGLSATLPNYEDVAAFLRVDPAQGLFYFDSSYRP-----VP 753 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + G E R + ++++ ++F +SR Sbjct: 754 LQQQ------YIGIMEKKAVKRFALMNEICYEKVMEQAELDNQVLIFVHSRKETASTAQA 807 Query: 312 LNELYA-----ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L +L+ ARL + S + + E+ ++ ++ + HH + ++ R + Sbjct: 808 LRDLFVENDTLARLIKPNSASSEVLLQEAEKIERNDDLKDLLPYGFGIHHAGMKRQDRTL 867 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRA 416 E A G L+ +V+TS+L G+++ A ++I+ LS LQ +GRA Sbjct: 868 VENAFADGHLKVLVSTSTLAWGVNLPAHTVIIKGTQIYNAEKGDWCELSPLDILQMLGRA 927 Query: 417 GH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G Q +G+ + + L++ + VE RL N V+ Sbjct: 928 GRVQFDTQGEGIIITQHSQLTYYLSLMNQQLPVESQMMSRL---ADNLNAEIVVGSVQNV 984 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETG 530 A A L + R+ R + A +L R +A + Sbjct: 985 AQAATWLGYTYLFIRMLRNPTLYGISIADRKADPTLLQYRTDLVHSAA-----TLLAKHN 1039 Query: 531 ILTARPGAQLLAVTSGGTIPDRGMYS 556 ++ + L VT+ G + + Sbjct: 1040 LIKYERRSGLFQVTALGRVASHYYIA 1065 Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats. Identities = 94/559 (16%), Positives = 183/559 (32%), Gaps = 68/559 (12%) Query: 26 AFKQPTAVQPQTWHVAARSEHAL-VIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 FK+ +Q Q SE L + +P GSGK + A L + L G D + + Sbjct: 1424 RFKRFNPIQTQVLPRLLESESNLFIGSPPGSGKGVLAELAVMKTLLSLGQPDPKSDEFGE 1483 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 ++Y+ P ++ + + + R+ V TGD+ A R Sbjct: 1484 H-LVVYLIPKESNCHQKYEDWKAKFGEESFWRQ---------NVVELTGDSTADLR---L 1530 Query: 145 RNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 +IL+ TP ++ + R+ ++ + +++DE H + G + G + + + R+ + Sbjct: 1531 LASANILVATPTQWDVLSRRWKQRKRIQNISLLLLDETHFLGGGEYGPTIEVVMSRMRFI 1590 Query: 204 L-------------HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + + LS ++ +A DV +LG + N HP +R Sbjct: 1591 AADMDKKKKAAGERGGRMRILALSNSIANARDVGEWLGASASEGIYNF----HPNVR--- 1643 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 + G + + R ++ + I ++ + +VF S A+ Sbjct: 1644 ----PQPLEIRVQGFEINDFSSRMLAMAKPLYNTIANQ-AEKKPAMVFVPSAKQAQLSAI 1698 Query: 311 RLNELYAARLQRSPSI---AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L A + A D A + +++ + + +S R Sbjct: 1699 DLITFALAENDPQKFVSHAAKDKVELPLEDAALLHTLENGVGYCTDT----MSSRNREYV 1754 Query: 368 EQALKSGELRCVVATSSLELGI---DMGAVDLVI----------QVATPLSVASGLQRIG 414 +G+++ ++ S+ + A +VI +A Q Sbjct: 1755 LDRFAAGKIQVLIVPQSMAWELQSAQCSAFMVVIMGTQFYDGREHRYVDYQLADVFQMTK 1814 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVE-CMFAGRLEN-LTPPHNPLDVLAQQTVAAA 472 A H K + F + + + + +LE+ L+ N V Sbjct: 1815 FANHVASPAVKCVLFCHASKKKFYAKFLYDPLPVESQLEHFLSDHINAEIVTKTIESKQD 1874 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKLVWNRETG 530 A+D L Y R + + +L D LS + R V E Sbjct: 1875 AVDYLTWTFMYRRFMKNPNYYNLQGATNVHLSDHLSELVETTVNALEESRCIQVVEEEDD 1934 Query: 531 ILTARPGAQLLAVTSGGTI 549 + LA + G I Sbjct: 1935 DEGE----ERLAPLNLGMI 1949 >UniRef50_C5DN54 KLTH0G14278p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DN54_LACTC Length = 2173 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 116/521 (22%), Positives = 199/521 (38%), Gaps = 70/521 (13%) Query: 5 PDPS------SLLPDVFSPATRDWFLRAFKQ-----PTAVQPQTWHVAA-RSEHALVIAP 52 P PS L+P P W AF +Q + + +A E+ L+ AP Sbjct: 479 PPPSRPSENFDLVPISALPV---WAKGAFPSNEMTNFNRIQSEVYPMAFGNDENMLICAP 535 Query: 53 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGI 112 TGSGKT A L L R+ + + K+ +I+YI+P+KAL + R Q L Sbjct: 536 TGSGKTNIAMLTVL-RVLSHHMSKNKGSFDLKSFKIVYIAPLKALVQEQVREFQRRL--- 591 Query: 113 ADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLR 171 ++VG TGD+ ++ +L++TPE ++ + Sbjct: 592 ---------VSYGIKVGELTGDSSL---TRQQIADCTVLVSTPEKWDIVTRKASGNDYSS 639 Query: 172 GVETVIIDEVHAVAGSKRGAHLALSLERLDA--LLHTSAQRIGLSATVRSASDVAAFLGG 229 VE +IIDE+H + +RG L + R + + LSAT+ + SDVA FL Sbjct: 640 LVELLIIDEIHLLHD-ERGPVLEGIVARSLRNIFSKERLRIVALSATLPNYSDVARFLRV 698 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 T + R P+A G E + + ++ +L+ V Sbjct: 699 PHCNTFYFDSSFRP------CPLAQQ------FCGITETTGIKKINAMNQACYDKLLEVV 746 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQ----RSPSIAVDAAHFESTSGATSNRVQ 345 + IVF +SR + L + R A+ + Sbjct: 747 QQGHQAIVFVHSRKDTVRTATWLKNKLIEEEKIPLFRKSEPGSREILRREAENASDKHLA 806 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VAT 402 + HH ++K R+++E G L +V+T++L G+++ A ++I+ + + Sbjct: 807 DLLLHGFGIHHAGLTKFDRSLSEDLFADGLLSVLVSTATLAWGVNLPAHAVIIKGTDIYS 866 Query: 403 P-------LSVASGLQRIGRAGH-QVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAG 449 P LS LQ +GRAG + +G+ ++ +++ + +E Sbjct: 867 PEKGTWTRLSPQDVLQMLGRAGRPRYDTFGEGIIITQSTSVQYYLAMLNQQLPIESQL-- 924 Query: 450 RLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 + L N VL T A+D L Y R+ + Sbjct: 925 -ISKLADNLNSEIVLGNITSRKEAVDWLGYTYLYVRMLGSP 964 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 70/387 (18%), Positives = 142/387 (36%), Gaps = 49/387 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFK------QPTAVQPQTWHVAARS-EHALVIAPTGSGK 57 P P+ LL D+ + + F+ +Q Q + + E+ L+ A G+G+ Sbjct: 1332 PAPTPLL-DLERVSVSELCSDEFESAINLIHFNKLQSQVFPTLYETNENVLIGAAPGNGR 1390 Query: 58 TLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 + A L AL +L+R G R +++ P + +++ LK +R Sbjct: 1391 AVMAEL-ALFKLWRHAGN-----------RAVFVCP-------SENKIEVLLKS---WQR 1428 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETV 176 R + T D + +++ TP L L+ + R+ ++ +E + Sbjct: 1429 RFSSLAGGKSINKFTEDNLVNLK---LLGESHLILCTPSQLDLVSRKWKQRKNVQKIELL 1485 Query: 177 IIDEVHAVAGSKRGAHLALSLERL---DALLHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 I+D+ H V GA + R+ A L T + + LS V ++ D ++G + Sbjct: 1486 ILDQAHLVGNGLPGAVYENIISRMTFISAQLETKLRIVALSNPVANSRDFGEWMGVRKEN 1545 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 P+ R ++I + ++ + +WP + L R Sbjct: 1546 IFNFSPSDRGNALQIQI----------QSTEQYLNHRYLARKFVWPQFQDLQLTNEKPRR 1595 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 VFT+SR + + + AA+ P + +S + + + Sbjct: 1596 LV-VFTSSRKHCVETVLEIMKTGAAQ-DFEPLAKGSPIFDNLDAKMSSKMLSEAASWKIG 1653 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVV 380 H ++ ++R ++ G L +V Sbjct: 1654 CLHAGMTSKERDTMKKLFADGGLNLLV 1680 >UniRef50_Q2GRG2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GRG2_CHAGB Length = 1300 Score = 328 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 124/551 (22%), Positives = 203/551 (36%), Gaps = 56/551 (10%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALD 67 LPD F R F ++ AVQ +++H + ++ ++ APTGSGKT L Sbjct: 58 QALPDKF----RAIF--PYELFNAVQSKSFHTIYHTNDNVVIAAPTGSGKTAILELAICK 111 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G E+ +I+Y +P KAL ++ R+ + + NL+ Sbjct: 112 LALDRGNEN---------FKIVYQAPTKALCSEKARDWEKKFGHM------------NLK 150 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT--SRARETLRGVETVIIDEVHAVA 185 TGDT E ++ I++TTPE + R L+ VE +IDEVH + Sbjct: 151 CAELTGDTSQAEMRRV--GDASIIVTTPEKWDSITRKWQDHRRLLQMVELFLIDEVHILK 208 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA L + R+ + + + I LSATV ++ D+A +LG R T PA R Sbjct: 209 DV-RGATLEAVVSRMKTI-GANVRFIALSATVPNSDDIARWLG--RNHTTQQLPAHRETF 264 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V S + + P G++ + R + +VF +R Sbjct: 265 GEEFRPVKLQKFVHGFGSNSNDFIFDKFLDQKLP----GLISKYARGKPILVFCFTRKSC 320 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E A L + + R + V S +Q F HH + + RA Sbjct: 321 ESTAAMLADFASDRPDGNDMWPVPTQRVPVV----SRELQEIVRFGVAFHHAGLDPQDRA 376 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAG 417 EQ G+L + TS+L +GI++ +V++ S +Q +GRAG Sbjct: 377 TIEQNFLKGQLGVICCTSTLAVGINLPCHTVVLKGTVGFADDQLKEYSDLEVMQMLGRAG 436 Query: 418 H-QVGGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + R+ ++ V + + L NL N L +A Sbjct: 437 RPQFDDSATAIILTRSANKERYQKMVSGQEILESTLHLNLIEHLNSEICLGTIHNLPSAK 496 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFD-ATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 L R+RR + L + + +D D + + + Sbjct: 497 TWLGGTFLSVRLRRNPNYYRLTGETTNPSEVDDRLEEICERDIKQLQETKLVTDQDSFHC 556 Query: 534 ARPGAQLLAVT 544 G + Sbjct: 557 TEYGRAMSKYM 567 >UniRef50_Q6BI73 DEHA2G12892p n=7 Tax=Saccharomycetaceae RepID=Q6BI73_DEBHA Length = 2145 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 116/557 (20%), Positives = 207/557 (37%), Gaps = 68/557 (12%) Query: 28 KQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 +Q + + A S E+ L+ APTG+GKT A L L + +T + R Sbjct: 470 SSLNRIQSKIFPSAFNSDENLLICAPTGAGKTNVAMLTILRAIHNYRDPETGQLDLR-NF 528 Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 +I+YI+P+KAL + R Q L + V TGD+ SK + Sbjct: 529 KIVYIAPLKALVQEQMREFQRRLTA-----------NFGIIVNELTGDSSL---SKQQIS 574 Query: 147 PPDILITTPESLYLMLTSRARETLRGV-ETVIIDEVHAVAGSKRGAHLALSLERLDA--- 202 +L+TTPE ++ + + + +IIDE+H + +RG L + R Sbjct: 575 ETQVLVTTPEKWDVITRKSSDLSYTNLTRLIIIDEIHLLHD-ERGPVLESIISRTLRQVE 633 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 + + +GLSAT+ + DVA L D + + P P+ Sbjct: 634 YTNDPVRLVGLSATLPNYEDVANLLRVDFKKGLFYFDSSYRP-----CPLEQQ------F 682 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 G E + ++ +LD I+F +SR K L+E + Sbjct: 683 IGIKEKKAIKKLSAMNEACYDKLLDCANNKHQMIIFVHSRKDTYKTAKWLHEKLVQDDKL 742 Query: 323 SPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + D+ E + ++ HH ++K +R++ E G L+ Sbjct: 743 DVVLKSDSGSREILKSEAEEMDNRSLKEIVPAGFGIHHAGLNKRERSVVEDLFAQGHLQV 802 Query: 379 VVATSSLELGIDMGAVDLVIQV---ATP-------LSVASGLQRIGRAGH-QVGGVSKGL 427 +V+T++L G+++ A +VI+ +P LS LQ +GRAG + +G+ Sbjct: 803 LVSTATLAWGVNLPAHTVVIKGTETYSPERGTWVQLSPQDILQMLGRAGRPRYDKSGEGV 862 Query: 428 FFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 +++ + +E +L N VL A++ L Sbjct: 863 IITSQDEIQYYLAILNQQLPIESQLMTKL---ADNLNAEIVLGTIKSREDAVNWLGYTYL 919 Query: 483 YSRVRRAAP-------WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 Y R+ R+ +KD + D++ + LV+N E G + + Sbjct: 920 YIRMLRSPALYHVGADYKDDENLYWKRV-DLIHSALTILHENKL---LVYNHENGDIKST 975 Query: 536 PGAQL--LAVTSGGTIP 550 ++ + TI Sbjct: 976 ELGKISSHYYINYETIN 992 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 59/361 (16%), Positives = 126/361 (34%), Gaps = 44/361 (12%) Query: 27 FKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F Q Q + S E+ + A G GKT+ A L L K+ Sbjct: 1317 FSYFNKFQSQVFQALFNSNENVFIGASKGCGKTVCAELAILKH------------WKQNK 1364 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 RI+YI+P + + + + I + + + +L I Sbjct: 1365 GRIVYINPTQEIIDKQLKIWRKIYSKITEPSKVINKLSGDLTTDI------------GLL 1412 Query: 146 NPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL- 203 + +++ TPE + R R++++ +E +I D+ H V RG + + R+ + Sbjct: 1413 SSSHLVLATPEQFEFVSRRWRQRKSVQAIELLINDDAHMVGNGSRGIAYEILVARMRLIS 1472 Query: 204 --LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR-IVVPVANMDDVSS 260 + + I LS ++ + D ++G + P+ R +I+ I + +N +D S Sbjct: 1473 TQVENGLRIIALSNSLSNGRDFGEWIGCTKQNVFNFDPSNRFNKIKEIRLQASNFNDNDS 1532 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 S+ L + + +IVF +R + + + + Sbjct: 1533 FMQSLIRPSY-------------QFLKDNTKEGKSIVFVPTRKQCIETAFKYIQHSSNDN 1579 Query: 321 QRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 ++ T + ++ ++S+ + I E+ + L ++ Sbjct: 1580 WSLLRTDLEILE-PYLKRITDKSLTECLSRGIGLYYNNMSQTDKLIIEKLFNNNVLSILI 1638 Query: 381 A 381 A Sbjct: 1639 A 1639 >UniRef50_B9WF65 Pre-mRNA-splicing helicase, putative n=4 Tax=Candida RepID=B9WF65_CANDC Length = 1985 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 124/583 (21%), Positives = 218/583 (37%), Gaps = 74/583 (12%) Query: 5 PDPSSLLPDV--FSPA--TRDWFLRAF-----KQPTAVQPQTWHVAARSEHAL-VIAPTG 54 P P L D P DW AF +Q + + A +++ L + APTG Sbjct: 341 PPPVQSLTDNDELLPISTLPDWAQEAFPRNETTTFNRIQSKIYSQAFETDNNLLICAPTG 400 Query: 55 SGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD 114 +GKT A L L + + K +I+YI+P+KAL + R Q L Sbjct: 401 AGKTNVAMLTVLRTIENFRHNGHIQL---KNFKIVYIAPLKALVQEQMREFQRRLTA--- 454 Query: 115 ERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVE 174 + V TGD+ SK I++TTPE ++T + ++ V+ Sbjct: 455 --------TYGIVVNELTGDSSL---SKQQIAETQIIVTTPEKWD-IITRKDPSYVKLVK 502 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDR 231 VIIDE+H + +RG L + R T + +GLSAT+ + +DVA F+ + Sbjct: 503 LVIIDEIHLLHD-ERGPVLESLVSRAIRKSETTGFDIRIVGLSATLPNYADVAKFIRA-K 560 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 P + A P + V G E R ++ + + Sbjct: 561 PEGLFYFDASYRP-----------CPLEQVYIGVKEQKAIKRIAAMNEACYDRMYQSLQD 609 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFI 351 H I+F +SR L E + V + + ++++++ Sbjct: 610 HHQLIIFVHSRKETFTTAKYLMEKL--DIDIVEQEGVKEILKQESESMSNSKLKEVIPQG 667 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV---ATP----- 403 HH ++K+ R+ E G LR +V+T++L G+++ A ++I+ +P Sbjct: 668 FGIHHAGLTKQDRSTVEDLFAQGHLRVLVSTATLAWGVNLPAHTVIIKGTETYSPESGTW 727 Query: 404 --LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLT 455 LS LQ +GRAG + +G+ +++ + +E +L Sbjct: 728 VQLSPQDILQMLGRAGRPRYDKNGEGIIITSQDEVQYYLAILNQQLPIESQLIHKL---V 784 Query: 456 PPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD-MLSGRYPSG 514 + V T ++ L ++ R+ R+ + +D +D L R Sbjct: 785 DNISAEVVSGSITTIEEGIEWLSYTYFFVRMLRSPALYGVE-ATYDFKIDPTLYNRRADL 843 Query: 515 DFSAF-----RPKLVWNRETGIL--TARPGAQLLAVTSGGTIP 550 ++AF +V+N G + T + TI Sbjct: 844 IYTAFCILHENKLIVYNAALGSVASTELGKIASHFYINFETIN 886 Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats. Identities = 88/519 (16%), Positives = 169/519 (32%), Gaps = 106/519 (20%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F +Q T+ SE + + + G GKT+ A L L+ G Sbjct: 1205 FTHFNKLQSSTFDAIYNSETNVFIGSSKGDGKTVLAELAILNHWANHKG----------- 1253 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 RI+YI+P + L + + E + + +G R LT Sbjct: 1254 -RIVYINPCQELVDKLFKKWSTFFSSFEKE------------INVLSG----NLREDLTT 1296 Query: 146 -NPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 N +++ TPE L + R+ R ++ I D++H V H + + R+ L Sbjct: 1297 VNQTQLVLATPEQFNCLSKRWKTRKAFRSIDLFIWDDLHLVGSD---VHYEMLVTRVRML 1353 Query: 204 LHT----SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH-----PQIRIVVPVAN 254 + + IGLS+ V ++ D+A ++G + T P R ++ + PV Sbjct: 1354 TSQWDDYALRIIGLSSPVLNSRDIAEWIGVAKSETYNFAPLSRENKITEIKLSVDNPVKI 1413 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 D++ V SG ++TI+F S A ++ + E Sbjct: 1414 YKDLAKVNSGL---------------------------QNTIIFAPSYNHAFEMAHAMLE 1446 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 A+ R+ + + +++ + +S+ R I E+ +S Sbjct: 1447 NNQAQEWRAVDLLKLEKYISKIQNPL---LKNLLPKGIAVFYSGMSRVDRLIVERLFESK 1503 Query: 375 ELRCVVATSSLELGIDM----GAVDLVIQVAT-----------PLSVASGLQRIGRAGHQ 419 + + T +D + V T + + +G Sbjct: 1504 SIGVLFCT------VDTCKFAPVANNVFVAGTRIYDGHEHRFLDYPLNDLYEMLG----C 1553 Query: 420 VGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 + ++ L++S + VE + L ++ Q + Sbjct: 1554 CQDGGVVHIYTTSQMVEFYSSLLNSGLAVESLLPNSLHEFFMDAAANGIIKQ---RQNCI 1610 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 D L +Y R+ + + DL + LS S Sbjct: 1611 DVLTFTFFYRRLLKNPSFYDLKEVSNNGISTYLSELIES 1649 >UniRef50_D0LS76 DEAD/DEAH box helicase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LS76_HALO1 Length = 711 Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 172/719 (23%), Positives = 257/719 (35%), Gaps = 124/719 (17%) Query: 15 FSPATRDWFLR--AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 P+ R F VQ T +V+APT GKT AAF L R+ E Sbjct: 9 LHPSLRYLIREALRFSSLRPVQEATIAPVLDERDIVVLAPTAGGKTEAAFFPVLSRVLSE 68 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + +LY+SP++AL + + + R V L G Sbjct: 69 RWQPVP---------VLYVSPLRALLNNQEGRI------------TRMAEAVGLATGTWH 107 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS---RARETLRGVETVIIDEVHAVAGSKR 189 GD A ++ L PP IL TPESL ++L + RA L V I+DEVHA+A R Sbjct: 108 GDVSAAKKRALLAAPPHILSITPESLEVLLITAPERAEALLSRVRVAIVDEVHALAADPR 167 Query: 190 GAHLALSLERLD-ALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 GAHL LERL QRIGLSATV + ++AA+L G + P + + Sbjct: 168 GAHLLSVLERLQQRAGGGHIQRIGLSATVGNPEELAAWLQG---------SGAQAPPLVV 218 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + + + G+ A R +DE+ R +VF R AE L Sbjct: 219 APSGERKEPLFRFCASQGDGDAALR------------IDELGAGRKRLVFVEGRRQAEAL 266 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 ++ AR R A HH SV + QR E Sbjct: 267 AGAVS----ARGTR-----------------------------AWVHHSSVGRAQREEAE 293 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 +A + +VATSS+ELGID+G +D V Q P +V+S QR+GR+G + G + F Sbjct: 294 RAFEEARDAVLVATSSMELGIDIGDLDQVYQRDAPTTVSSLAQRLGRSGRRPGTTPQMTF 353 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVR 487 + DL+ + + G +E + P VL Q A L + +R+R Sbjct: 354 LLKQPEDLLVALAVTSLFERGWVEPVHPSSRLWTVLVHQMFANLLETGGLTRAQLVARLR 413 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + + + L E G L G LL V Sbjct: 414 SVPAFAGIGDNEQHGLIVHLV-------------------EEGWLDEHDGVLLLGVRGER 454 Query: 548 TIPDRGMYSVL-----LPEGEEKAGSRRVGELDEEMVYESRV-NDIITLGATSWRIQQIT 601 R + + + G +VG LD V + + L +W++ + Sbjct: 455 EFGRRNFFRLYAVFDTSETFAVRHGQEQVGTLDRWFVLQLSARRPVFRLAGRAWKVIEFD 514 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT 661 + + P + P W G + + E I + + A T WLA Sbjct: 515 LRRSALRVVPAEAGTAPQWTGRASILSRPVCERIRELVTEDGTPAHLDATCSAWLAHARG 574 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + G+ QR + D + H+ G ++ A + Sbjct: 575 LYADVGVDRVQRPIVAV-----------------DGKTTWHTFAGTAINSVLARLVEHY 616 >UniRef50_C0NG17 Pre-mRNA-splicing factor brr2 n=3 Tax=Leotiomyceta RepID=C0NG17_AJECG Length = 2911 Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats. Identities = 116/582 (19%), Positives = 204/582 (35%), Gaps = 65/582 (11%) Query: 28 KQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 ++ +Q + + A + + LV APTGSGKT A L L + + +T E Sbjct: 440 QKLNRIQTKCFPTAFNDDGNMLVCAPTGSGKTNVAMLTILREIGKNRNHETGEIMLDD-F 498 Query: 87 RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN 146 +I+YI+P+KAL + N LK +RV TGD ++ +K Sbjct: 499 KIVYIAPLKALVQEQVGNFSERLK------------PYGIRVSELTGD---RQLTKQQIA 543 Query: 147 PPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH 205 I++TTPE ++ R V +IIDE+H + RG L + R + Sbjct: 544 DTQIIVTTPEKWDVITRKATDTSYTRLVRLIIIDEIHLLHDD-RGPVLESIVSRTIRKIE 602 Query: 206 T---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 + IGLSAT+ + DV +FL D + + P P+ Sbjct: 603 QTGDPVRLIGLSATLPNYRDVGSFLRVDPINALFHFDGSYRP-----CPLKQE------F 651 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHR-STIVFTNSRGLAEKLTARLNELYAARLQ 321 G + + ++ T +L++V ++ ++F +SR K + + Sbjct: 652 IGVTDKKAIKQLKTMNDVCYTKVLEQVGTNKNQMLIFVHSRKETAKTARYIRDKAVEMET 711 Query: 322 RSPSIAVDAAH----FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 + DAA E ++ + HH +S R ++ G L+ Sbjct: 712 IGQILRSDAASRAILAEEADAVNDPALKDLMPYGFGIHHAGMSLADRTSVQELFADGSLQ 771 Query: 378 CVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRAGH-QVGGVSKG 426 +V T++L G+++ A ++I QV +P LS LQ +GRAG Q +G Sbjct: 772 VLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEG 831 Query: 427 LFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 + L++ + +E +L N VL +D L Sbjct: 832 IIITSQTEMQYYLSLLNQQLPIESQLMSKL---ADNLNAEIVLGNVRNRDEGVDWLGYTY 888 Query: 482 WYSRVRRAAPWKDL-PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + R+ R+ + D L+ + ++ Sbjct: 889 LFVRMLRSPGLYSVGTDYENDEALE-------QRRVDLIHSAATVLEKANLVKYDKKLGR 941 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES 582 L T G I + V ++ ++ Sbjct: 942 LQSTELGRIASHYYITHSSMSTYNYHLQPMVSTIELFRIFAL 983 Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats. Identities = 91/547 (16%), Positives = 185/547 (33%), Gaps = 66/547 (12%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 + VQ QT+ ++ + + APTGSGKT+ A L + Sbjct: 1290 WDHFNKVQTQTFKSLFDTDDNVFLGAPTGSGKTVCAEFALLHHWSKSTPG---------- 1339 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 + +YI+P + L + D + R + TG+T A + Sbjct: 1340 -KAVYIAPFQELVD----------HRVTDWQTRLSNLNGGKNILKLTGETTADLK---IL 1385 Query: 146 NPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 D+++ TP + +L+ + R ++ VE I DE+H + G + G + + R+ + Sbjct: 1386 EQADLVLGTP-IQWDVLSRQWQRRRNVQAVELFIADELHML-GGQGGYIYEVVVSRMHYI 1443 Query: 204 ---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 + IGLS + +A D+ +LG + P +R + + + ++ S Sbjct: 1444 ALQTEKELRMIGLSVPLSNARDIGEWLGAKKHTIYNFSPHVRPVPLELHIQSYSIPHFPS 1503 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARL 320 + + + + ++ + +VF +R L A Sbjct: 1504 LMLAMAKPAFTS-------------ILQLSPDKPALVFVPTRKQTRSTALDLLAACIAAD 1550 Query: 321 QRSPSIAVDAAHFESTSGATSNR-VQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 + D + + S +H ++S + I K G ++ + Sbjct: 1551 DEDRFLHADIGEISPLLKRIDEQALAESISHGIGYYHEALSNSDKRIVTHLFKLGAIQVM 1610 Query: 380 VATSSLELGIDMGAVDLVI----------QVATPLSVASGLQRIGRAGHQVGGVS--KGL 427 +A+ + I+ A +++ ++ LQ G+A + S L Sbjct: 1611 LASRDVCWEINFNAHLVIVMNTQFFDGREHRYIDYPISEILQMFGKASRPLEDSSGKGVL 1670 Query: 428 FFPRTRRD----LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 P +RD ++ A+ +E L + +A A+D + +Y Sbjct: 1671 MVPAVKRDYYKKFLNEALPIESHLQIYLHDAFVAEISTRTIA---STQDAVDWMTYTYFY 1727 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV-WNRETGILTARPGAQLLA 542 R+ + L + LS S K++ + E L+ A + A Sbjct: 1728 RRLLANPSYYGLTDVSHEGLSTFLSELVESTLKELSEAKIIDLDDEDDTLSPLNAAMIAA 1787 Query: 543 VTSGGTI 549 + I Sbjct: 1788 YYNISFI 1794 >UniRef50_O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase n=53 Tax=root RepID=U520_HUMAN Length = 2136 Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats. Identities = 117/612 (19%), Positives = 215/612 (35%), Gaps = 71/612 (11%) Query: 2 ADNPDP----SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSG 56 A P P LLP P FK +Q + + A + E+ L+ APTG+G Sbjct: 449 ALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAG 508 Query: 57 KTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER 116 KT A + L + + D +I+YI+P+++L ++ + L Sbjct: 509 KTNVALMCMLREIGKHINMDG--TINVDDFKIIYIAPMRSLVQEMVGSFGKRLA------ 560 Query: 117 RRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVET 175 + V TGD + K + I++ TPE ++ R + V Sbjct: 561 ------TYGITVAELTGD---HQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRL 611 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRP 232 +I+DE+H + RG L + R + + IGLSAT+ + DVA FL D Sbjct: 612 IILDEIHLLHDD-RGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPA 670 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + P VP + G E R + + I++ ++ Sbjct: 671 KGLFYFDNSFRP-----VP------LEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKN 719 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSD 348 +VF +SR K + ++ + + +A E + ++ Sbjct: 720 -QVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLL 778 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-- 403 + HH +++ R + E ++ +V+T++L G+++ A ++I QV +P Sbjct: 779 PYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEK 838 Query: 404 -----LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLE 452 L LQ +GRAG Q +G+ L++ + +E +L Sbjct: 839 GRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLP 898 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--DATLDMLSGR 510 ++ N VL A A++ L Y R+ R+ + D LD Sbjct: 899 DML---NAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLD----- 950 Query: 511 YPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR 570 + + ++ VT G I + + + Sbjct: 951 --QRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPT 1008 Query: 571 VGELDEEMVYES 582 + E++ V+ Sbjct: 1009 LSEIELFRVFSL 1020 Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 109/564 (19%), Positives = 210/564 (37%), Gaps = 70/564 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P S L + A + F +Q Q ++ S+ + V APTGSGKT+ A Sbjct: 1306 PLPVSALRNS---AFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEF 1362 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L L + R +YI+P++AL V + + + Sbjct: 1363 AILRMLLQSS-----------EGRCVYITPMEALAEQVYMDW-----------YEKFQDR 1400 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVH 182 +N +V + TG+T + +I+I+TPE ++ + R+ ++ + ++DEVH Sbjct: 1401 LNKKVVLLTGETSTDLK---LLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVVDEVH 1457 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G + G L + R+ + + + + LS+++ +A DVA +LG T P Sbjct: 1458 LI-GGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHP 1516 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +R + + + N+ + R S+ + I + + IVF Sbjct: 1517 NVRPVPLELHIQGFNISHTQT------------RLLSMAKPVYHAI-TKHSPKKPVIVFV 1563 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN-RVQSSDVFIARSHHGS 358 SR + AA +QR + S+ ++ + + H Sbjct: 1564 PSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYLHEG 1623 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV----------IQVATPLSVAS 408 +S +R + EQ SG ++ VVA+ SL G+++ A ++ I + Sbjct: 1624 LSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYD 1683 Query: 409 GLQRIGRAGHQV-GGVSKGLFFPR-TRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLA 465 LQ +G A + + + + +++D + L++ + N V Sbjct: 1684 VLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTK 1743 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW 525 A+D L Y R+ + + +L +S R+ S S + + Sbjct: 1744 TIENKQDAVDYLTWTFLYRRMTQNPNYYNL---------QGISHRHLSDHLSELVEQTLS 1794 Query: 526 NRETGILTARPGAQLLAVTSGGTI 549 + E + +A + G I Sbjct: 1795 DLEQSKCISIEDEMDVAPLNLGMI 1818 >UniRef50_D2RJD3 DEAD/DEAH box helicase domain protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJD3_ACIFE Length = 757 Score = 325 bits (834), Expect = 7e-87, Method: Composition-based stats. Identities = 142/697 (20%), Positives = 237/697 (34%), Gaps = 126/697 (18%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLF 70 D ++P +D+ + + + + +Q V + E+ L+ A T SGKT AAF L Sbjct: 5 DRYAPFVQDFIYSQGWSELRPIQVAAGDVLLNTDENLLLTASTASGKTEAAFFPILSLFA 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + K+ +YI P+KAL D LQ + E + V Sbjct: 65 Q---------APPKSVGCIYIGPLKALINDQFLRLQPLCE------------EGGIPVWH 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVAGS 187 GD ++KL ++P IL TPESL +L + + V+IDEVH++ Sbjct: 104 WHGDVSQSHKAKLLKHPSGILQITPESLEALLLHKHMAIPRLFGDLRFVVIDEVHSLLRG 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--GGDRPVTV--VNPPAMRH 243 RG ++RL L + +RIGLSAT+ V FL G R + V P R Sbjct: 164 DRGGQTLCLIQRLSRLAGVNPRRIGLSATLGDPEKVGEFLSMGTGRKTLIPQVKAPGTRW 223 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI--LDEVLRHRSTIVFTNS 301 V + + + + G+ + E R + +VF NS Sbjct: 224 RLSMEHFYVKDAQAGEDRTDIAALPALDQKTDQAPAQADPGLGYIFEHTRGKKCLVFVNS 283 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R E +T L + + + HHG++S Sbjct: 284 REECEGVTTSLRQYCELNHEPDRFL---------------------------IHHGNLSA 316 Query: 362 EQRAITEQALKSGELRCVVATSSLE-------------LGIDMGAVDLVIQVATPLSVAS 408 R E+ +K E LGID+G ++ Q+ P +V+S Sbjct: 317 SYRETAEELMKD------------ESRSLTTVTTSTLELGIDIGRLERAFQIDAPWTVSS 364 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRT-------------RRDLVDSAVIVECMF-AGRLENL 454 LQR+GR G + + F R L+ +++ +E Sbjct: 365 FLQRMGRTGRR-DLPPEMWFVIREDEPEIRAMLPATIPWKLLQGIALIQLYLEERWVEPP 423 Query: 455 TPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 P +L QT++ A+ + RV R + + + + + L L Sbjct: 424 RLDRLPYSLLYHQTMSVLASNGEMSPAALADRVLRLSYFHRITQEDYKVLLRYLIA---- 479 Query: 514 GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE--EKAGSRRV 571 E I G ++ + I Y V E + S+ + Sbjct: 480 --------------EDHIQRTEQGGLIVGLAGERVIRSFKFYGVFQENEEFTVRCDSQEL 525 Query: 572 GELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNG-RPAE 630 G + V + I L WR+ ++ R + V ++P + GE G + Sbjct: 526 GTV----VAPPPPGEKIALAGHVWRVLEVDRKR-HVIYCELVKGKVPAYFGECPGDIHTK 580 Query: 631 LGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQG 667 + E + L + + L + A G Sbjct: 581 VLERMRRVLREDRNYPYLMKNAVARLQQARFTAKASG 617 >UniRef50_Q55CI8 Activating signal cointegrator 1 complex subunit 3-like n=10 Tax=Eukaryota RepID=HELCL_DICDI Length = 2237 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 117/612 (19%), Positives = 223/612 (36%), Gaps = 73/612 (11%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALV-IAPTGSGKTLAAFLYALDRL 69 LP+ + K VQ + + A ++++ L+ APT SGKT A L L + Sbjct: 536 LPEWSRLPFEE---SGVKSLNRVQSKLFDCAFKTDNNLLLSAPTSSGKTNVAMLTILHEI 592 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + D+ + + +I+YI+P+K+L ++ N LK + V Sbjct: 593 GKNRDRDSGKI-RLDAFKIVYIAPMKSLVQEMVGNFSKRLKSY------------GIVVN 639 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSK 188 TGD + + I++TTPE ++ S R + V+ +IIDE+H + + Sbjct: 640 ELTGDQSLTNKQ---ISETQIIVTTPEKWDIITRKSGDRAYTQLVKLIIIDEIHLLHD-E 695 Query: 189 RGAHLALSLERLDALLHTSAQ---RIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RG L + R ++ ++ Q +GLSAT+ + DVA FL + + R Sbjct: 696 RGPVLECIVARTLRMIESTQQMVRLVGLSATLPNYEDVATFLRVEPDGVFYFDSSYRPIP 755 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + G ++ I + E + ++F +SR Sbjct: 756 LE--------------QQYIGISDRGIKQLQRCNDITFTKVSERVGDHQILIFVHSRRET 801 Query: 306 EKLTARLNELYAARLQRSPSI----AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 K L + I + + ++ + ++ + HH +S+ Sbjct: 802 AKTGKDLRDRAVEDQSIDRYIRDPASREILRATASKQIQNAELKDLLPYGIGIHHAGLSR 861 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP------LSVASGLQR 412 R++ E ++ +++T++L G+++ A ++I Q+ P LS Q Sbjct: 862 SDRSLVEDLFGDNRIQVLISTATLAWGVNLPAHTVIIKGTQIYNPEKGWCELSPLDVTQM 921 Query: 413 IGRAGHQV-GGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 +GRAG +G+ L+++ + +E F + + N VL Sbjct: 922 LGRAGRPPFDKEGEGIIITSQHELQFYLSLLNTQLSIESQF---ISRIADNLNAEIVLGS 978 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--DATLDM--LSGRYPSGDFSAFRPK 522 A++ L Y + R P ++ F D L+ L + + Sbjct: 979 IQTVRDAVNWLGYTYLYICMIRNPPLYEISYDDFEKDPLLEQRRLDLVHSAATILEKNSL 1038 Query: 523 LVWNRETGILTAR---PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV 579 + ++R++G L + A +T+ +Y L RV L E Sbjct: 1039 IKYDRKSGKLQSTELGKVASHYYITNSSM----SIYQEHLKPSMSDIELLRVFSLSSEFK 1094 Query: 580 -YESRVNDIITL 590 R + L Sbjct: 1095 NVVVREGEKFEL 1106 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 101/522 (19%), Positives = 202/522 (38%), Gaps = 74/522 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P +L D P F F A+Q Q ++ +S ++A + APT SGKT+ A + Sbjct: 1376 PLPIQVLKD---PKAESIFKPTFSIFNAIQTQVFNCMYQSNDNAFISAPTNSGKTVCAEI 1432 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 AL R F++ ++++Y++P++ L + ++ ++ Sbjct: 1433 -ALIRCFKQN----------PKAKVVYLAPMQDLASVRLKDWSNKFG---------VKSP 1472 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVH 182 L V TGD + + +I++T E ++ + R+ L+ + +I+DE+H Sbjct: 1473 FGLVVSDLTGDAVTDNK---ILDRSNIIVTNCEKWDILSRKWKQRKALQSINLLIVDELH 1529 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G + G + + + R+ + + + I LS+++ +A D+ ++G P Sbjct: 1530 LI-GGEYGPTMEIVVSRMRYISTQTGNALRVIALSSSIANARDLVLWIGATPQTCYNFHP 1588 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +R + + G R ++ + +++ +IVF Sbjct: 1589 NVRPIPVEYQI------------QGFEFPHFNARMLAMTKPTVYEVAK--NKNQQSIVFV 1634 Query: 300 NSRGLAEKLTARL---NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 +R L+ L A + + L + + + S ++ S +H Sbjct: 1635 PTRKLSRSLAADIIANVSSFEDTLTKPYLVCEEHVLTPYLEDVDSFALKQSLQMGVAFYH 1694 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT-----------PLS 405 +++ +R + E +SG +R ++AT S+ +D LV+ + T Sbjct: 1695 DGLTERERRVVEILFRSGSIRVLIATHSVAWLLDNVFAQLVVIMGTQLYQGKDIRYIDYP 1754 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLD--- 462 + LQ IGRAG Q GG G+ + + L+ + + L P + LD Sbjct: 1755 INDILQMIGRAGKQEGG---GVISNKVAKVLLLCHAPKKEYYKMFLNEPLPVESHLDHCL 1811 Query: 463 --------VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 V T A+D L Y R+ + + +L Sbjct: 1812 HDQFNSEIVTKTITKKQDALDYLTWTFLYRRLNQNPNYYNLS 1853 >UniRef50_D1TEQ3 Lhr-like helicase-like protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TEQ3_9BURK Length = 738 Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 152/538 (28%), Positives = 226/538 (42%), Gaps = 56/538 (10%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ WF QP Q + W A ++ A TG+GKT A + AL Sbjct: 67 FADKLDAWFASRHWQPFEFQREVWRNIAAGASGVLHASTGAGKTWAVWFGALTAFASAAS 126 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +L+I+P++AL D R LQ +A V VG+RTGD Sbjct: 127 TPRKHPEP---LTVLWITPMRALAADTARALQSSAAELA----------VPWSVGLRTGD 173 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A ER + R P L+TTPESL L+LT ARE L V VI+DE H + G+KRG Sbjct: 174 TSAAERERQNRRMPSALVTTPESLTLILTRADAREVLSQVRLVIVDEWHELLGNKRGTQT 233 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 L+L RL Q GLSAT+ + S L P A + +P A Sbjct: 234 QLALARL-THWRAGLQVWGLSATLGNLSFATEVLLA--------PVATPRVSVHGALPKA 284 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + V ++ T E G G + + + R+++VFTN+R E L Sbjct: 285 LI--VDTIIPDTIERFPWG--GHMGMRQVDAVARAIDEARTSLVFTNTRSQCEVWYQALL 340 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 + + + HHGS+ ++ R E+ LK+ Sbjct: 341 D-----------------------------ARPEWAGVIALHHGSLDQQVREWVERGLKN 371 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G L+ VV TSSL+LG+D V+ V Q+ +P VA +QR GR+GH G S+ P Sbjct: 372 GLLKVVVCTSSLDLGVDFLPVERVFQIGSPKGVARLMQRAGRSGHAPGLPSRVTIVPTHA 431 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +L+++A E + ++E+ PH P DVL Q V A E Y + ++ Sbjct: 432 LELIEAAAAREAVDKRQIESRDTPHKPFDVLVQHLVTVAIGGGFDARELYDELLHTYAYR 491 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 DL ++ FD L+ + G + ++ + + R + GTI + Sbjct: 492 DLTQQEFDWALNFVEGGGATLRAYPDYHRVARDSDGLYRVPRNDLARRHRNNIGTIRE 549 >UniRef50_B5YNG2 RNA or DNA helicase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YNG2_THAPS Length = 2088 Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats. Identities = 121/575 (21%), Positives = 212/575 (36%), Gaps = 68/575 (11%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P + LP+ D F K VQ + VA RS E+ L+ APTG+GKT A L Sbjct: 382 PIAELPEWTH----DAFA-GMKMLNRVQSKMADVALRSSENILLCAPTGAGKTNVAMLSI 436 Query: 66 LDRLFREGGEDTREA-HKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L+ +G E + +I+Y++P+KAL +V +N L Sbjct: 437 LNNDDEDGKHSKHEGMFDLSSFKIIYVAPMKALVQEVVKNFSKRLD------------PY 484 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHA 183 + V +GD+ ++ + +++TTPE ++ R + V+ VIIDE+H Sbjct: 485 GITVRELSGDSSL---TRQQISETQMIVTTPEKWDIVTRQGEGRAYTQLVKLVIIDEIHL 541 Query: 184 VAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + RG L + R+ + T + +GLSAT+ + +DVA FL + Sbjct: 542 LHDD-RGPVLESIVARVIRQVETTAEPVRLVGLSATLPNYADVATFLRVKPEKGMFFFDH 600 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P VP+ G E + R + ++F + Sbjct: 601 SYRP-----VPLQMQ------YIGITERNAFRRFQLQNEICYEKATVQRKNGNQMLIFVH 649 Query: 301 SRGLAEKLTARLNELYAARLQRSPSI----AVDAAHFESTSGATSNRVQSSDVFIARSHH 356 SR K L ++ R Q S + A E + + ++ F HH Sbjct: 650 SRAETGKTAKALRDIALERDQLSLFVKEGGATQEILREEVATVKNADLKDVLSFGFAIHH 709 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSV 406 +++ R + E G + + T++L G+++ A ++I Q+ P LS Sbjct: 710 AGMARADRELVEDLFADGHIGVLCCTATLAWGVNLPAHAVIIKGTQIYDPSKGRWAELSP 769 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 LQ +GRAG Q +G+ L + + VE ++ L N Sbjct: 770 LDVLQMLGRAGRPQYDNEGEGIIMTAHSELQYYLSLTNLQLPVESQM---IKTLPDHLNA 826 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS--- 517 VL + A+D L Y R+ + + + + R + Sbjct: 827 EVVLGTIQTISEAVDWLSYTFLYVRMLKNPNLYGISDKAASEDPTLKHRRMDLAHTAACM 886 Query: 518 -AFRPKLVWNRETGILTARPGAQL---LAVTSGGT 548 + ++R +G L + P ++ ++ Sbjct: 887 LERSHLVRYDRRSGALQSTPLGRIASQYYISHSSM 921 Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats. Identities = 88/519 (16%), Positives = 173/519 (33%), Gaps = 74/519 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P S+L + T L F + +Q QT+H ++ ++ LV AP+GSGK+ A Sbjct: 1230 PLPISVLGE-----TAFTKLYNFAEFNPIQTQTFHHLFKTDKNCLVCAPSGSGKSACAEF 1284 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + L + + +YI+P +I +D + R G Sbjct: 1285 AIMRMLVND-----------PNGKCVYIAP----------KEEIAFNTFSDWKTRFGSIL 1323 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVH 182 +V TG+ + I++ T + + R R+ ++ + I+D++H Sbjct: 1324 RGGQVVQLTGEVTPDLK---FIAEARIIVCTAKQWDAISRRWRQRKAVQAITLCIVDDIH 1380 Query: 183 AVAGSKRGAHLALSLERLDALL--------HTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 + G G + + + R+ + + IGL A++ +A +V ++G Sbjct: 1381 FLGGDA-GPTMEVIISRMRFISTQKQQKEDSPQLRMIGLGASLANAREVGEWMGVSSKGL 1439 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 P +R + I + + AGR ++ + ++ + Sbjct: 1440 FNFSPKVRPIPLEI------------YFHSFDQSNFAGRLMAMGKPVYNAVMR-HSEGKP 1486 Query: 295 TIVFTNSRGLAEKLTARLNELYAA-RLQRSPSIAVDAAHFESTSGATSN-RVQSSDVFIA 352 +++F SR A+ L + + S +A + +Q Sbjct: 1487 SLIFVPSRRQAQLTAIDLMTYHQSIDGDTFLSKETNALEIADVAACLREPALQQVTSSGI 1546 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------AT 402 H + + + G L +V + I + A +VI Sbjct: 1547 GFLHDGMVESDWEQILGLYRKGSLTVLVCPVDICWKIKVMAHLVVIMGTETFDGRERRYV 1606 Query: 403 PLSVASGLQRIGRAGHQV-GGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTP 456 +A L +G A Q K + T + L+ + VE L Sbjct: 1607 DYPIADLLHMMGMASRQAIDTCGKCVIMCHTPKKEHLKKLLYDPLPVESHLDHYL---HD 1663 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 N V + A+D + Y R+ + + +L Sbjct: 1664 HFNSEIVTKTISCMQDAVDYITWTLLYRRLSKNPNYYNL 1702 >UniRef50_D2UY12 U5 snRNP-specific spliceosomal protein n=1 Tax=Naegleria gruberi RepID=D2UY12_NAEGR Length = 2057 Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats. Identities = 117/510 (22%), Positives = 196/510 (38%), Gaps = 62/510 (12%) Query: 21 DWFLRAFK---QPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 +W +AF + AVQ + A S E+ L+ APTG+GKT A L L + E Sbjct: 386 EWSHKAFPNMVKLNAVQSIIFKSAFYSPENLLICAPTGAGKTNVAVLTMLHEIGLHMDES 445 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 +++YI+P+KAL +V NL LK N+ V TGD Sbjct: 446 FDNLIDLD-FKMIYIAPMKALVQEVVGNLSERLK------------PYNIVVQELTGD-- 490 Query: 137 AQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLAL 195 + +K + I++TTPE ++ S R + V+ +IIDE+H + +RG L Sbjct: 491 -RNMTKQQIDETQIIVTTPEKWDIVTRKSGDRTYVEKVKLIIIDEIHLLHD-ERGPVLES 548 Query: 196 SLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 + R + + +GLSAT+ + DVA FL + R Sbjct: 549 IVARTIRQQESTRQNIRLVGLSATLPNYKDVATFLRVKPDNLFYFDSSFRP--------- 599 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 + G E R + + ++ E+ IVF +SR K L Sbjct: 600 ---CPLDQYYIGVNEKKPFKRHKLMNEIVYNKVV-EIAGKHQIIVFVHSRKDTYKTAKAL 655 Query: 313 NELYAA-----RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 ++ + + S + S A ++ F HH +++ R + Sbjct: 656 RDMAIENDTIGKFVKQGSATSEILKEASQKDANGAELKELLSFGVGIHHAGMTRNDRTLV 715 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRAG 417 E L+ +V+T++L G+++ A ++I QV +P LS +Q IGRAG Sbjct: 716 EDLFDDERLQVLVSTATLAWGVNLPARRVIIKGTQVYSPEKGDWTELSALDVMQMIGRAG 775 Query: 418 H-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 +GL L++ + +E F +++L N VL Sbjct: 776 RFPRDSRGEGLIVTTQSHLQYYLALLNQQLPIESQF---IKSLPDNLNAEVVLGTVQNID 832 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFD 501 A++ L Y R+ R + + + Sbjct: 833 EAINWLGYTYLYVRMLRNPLLYGITKEDVE 862 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 108/549 (19%), Positives = 209/549 (38%), Gaps = 74/549 (13%) Query: 29 QPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSR 87 + +Q Q + SE L+ AP GSGK+L L + + + + S+ Sbjct: 1246 KFNPIQTQVFRSVYHSEDSVLIAAPGGSGKSLCGVLAIM-----------KMFNDHENSK 1294 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 +YI+ I ++ ++ + I RV TG + + Sbjct: 1295 CVYIAAIPSVANKREKKWISLFEQI------------GKRVVNLTG---NLAKDMILFEQ 1339 Query: 148 PDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL--- 203 DI+I+TPE +AR++L V+ V+ DE+H + G G + + + R+ + Sbjct: 1340 GDIIISTPEQFDMFSRKWKARKSLSNVKLVVADELHMIGGEV-GPIIEVVISRIRYMSSQ 1398 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS 263 L T+ + +GLSA++ +A DVA ++G + P R + I + Sbjct: 1399 LETNIRIVGLSASILNAKDVADWIGTKKECCFNFHPRYRSIPLEINI------------Q 1446 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS 323 G + S+ R+ ++ ++ + TI+FT+S A +++ L + + + Sbjct: 1447 GFTQSSYNARQVAMSKPAY-KVIKQKSGGEQTIIFTSSPKQASFISSDLIDHLSNDINSK 1505 Query: 324 PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 + +A + S+ ++ F +H +++K + I E+ +G ++ +V T Sbjct: 1506 IFVGDSSAINHAIGSVDSSALKEVLTFGIAFYHETLTKNDKQIVEELYSTGVIKVLVVTH 1565 Query: 384 SLELGIDMGAVDLVI----------QVATPLSVASGLQRIGRAGH-QVGGVSKGLFF-PR 431 + G++ + ++I T S+ +Q + R+G V S F Sbjct: 1566 QMCWGMEQKSKLVIIMGTEYYNGKEHRYTDYSIIDMVQMMSRSGRIAVDKDSTCYIFCAA 1625 Query: 432 TRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 +R+D + + L++ L P N A+D L Y R+R+ Sbjct: 1626 SRKDYLLKFLYEPFPVESHLDHFLYDPLNAEISSKIIENKQGAVDYLTWTFLYRRIRKNP 1685 Query: 491 PWKDLPRRVFDATLDMLSGRYPSG--DFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + +L D LS S + LV + E + + GT Sbjct: 1686 NYYNLSGTTKIHLSDYLSELVESSLEELQKCNCILVEDDE------------ITAMNLGT 1733 Query: 549 IPDRGMYSV 557 I Y V Sbjct: 1734 I--AAHYYV 1740 >UniRef50_C5DRW4 ZYRO0B11858p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DRW4_ZYGRO Length = 2155 Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats. Identities = 111/568 (19%), Positives = 208/568 (36%), Gaps = 71/568 (12%) Query: 7 PSSLLPDVFSPATRDWFLRAF-----KQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLA 60 P S+ P W AF + A+Q + + V R ++ L+ APTG+GKT Sbjct: 480 PISVFP--------SWAQNAFPSAETESLNAIQSKLYPVTFGRDDNVLLCAPTGAGKTNV 531 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A + L + +T K +++YI+P+KAL + Q L + Sbjct: 532 AMMAILRTISNHINVETGRLT-SKNFKVVYIAPLKALVQEQVSEFQRRLSYL-------- 582 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIID 179 ++V TGD+ + L +LI+TPE ++ ++ V +IID Sbjct: 583 ----GIKVVELTGDSNLNRQQLL---EAQVLISTPEKWDVITRKADESSFVQSVRLMIID 635 Query: 180 EVHAVAGSKRGAHLALSLERLDAL--LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 E+H + + RG + + R + +GLSAT+ + DV+ FL Sbjct: 636 EIHLLHDA-RGPVIEAIVSRALQAKTFQEPPRLLGLSATLPNYQDVSRFLRVPDNGLFYF 694 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 R +S G E S + ++ L+ V + I+ Sbjct: 695 DSTYRP------------CPLSQQFCGVTEKSSLKKLNAMNETCHEKTLEAVKQGHQVII 742 Query: 298 FTNSRGLAEKLTARLNELYAAR----LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 F +SR + L E ++ L R A + +++ Sbjct: 743 FVHSRKETARTALWLMEKFSENDNLGLIRKSDPASGKILETESENVQDGQLKKIIRAGIG 802 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TP 403 HH ++K R+++E G L+ +V+T++L G+++ A ++++ P Sbjct: 803 IHHAGLTKTDRSLSEDLFADGLLQVLVSTATLAWGVNLPAHTVIVKGTDVYSPESGSWEP 862 Query: 404 LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPP 457 LS LQ +GRAG + +G+ +++ + +E + + Sbjct: 863 LSPQDLLQMLGRAGRPRYDTTGEGIIITNQTDVQFYLAVLNQQLPIESQL---VSKIVDN 919 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA-PWKDLPRRVFDATLDMLSGRYPSG-D 515 N V +D L Y R+ + +K ++TL S Sbjct: 920 LNAEVVAGNIQNRKHGVDWLTYTYLYVRMLMSPEIYKVPDPEKEESTLKYGEALIHSALA 979 Query: 516 FSAFRPKLVWNRETGILTARPGAQLLAV 543 +V++ E+G + A ++ + Sbjct: 980 ILHEENLVVYDAESGDVEATELGRISSY 1007 Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats. Identities = 85/559 (15%), Positives = 164/559 (29%), Gaps = 97/559 (17%) Query: 5 PDPSSLLPDVFSPATR---DWFLRAFKQ--PTAVQPQTWHVAARS-EHALVIAPTGSGKT 58 P P+ L + P + + F +AF Q Q + + ++ LV A GSGKT Sbjct: 1318 PAPTPLADMLLMPISDLENEEFTKAFDYENFNKFQSQVFQPLYTTNDNVLVGASKGSGKT 1377 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 + A L L+ + G R LYISP L + R Sbjct: 1378 VMAELAILNHWRQNKG------------RALYISP----HQYQIDQLSK------SWKER 1415 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL-MLTSRARETLRGVETVI 177 V D R +++ TPE L R R ++ +E I Sbjct: 1416 FSALAGGKSVNKLGSDLNYNLR---IIAQSHLILATPEQFDLVSRRWRNRRNIQRIELAI 1472 Query: 178 IDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 D+V ++ GA + R+ + L + + L + + D+ ++G R Sbjct: 1473 YDDVQEISNGMAGAVYETIISRMTFISTQLEKETRFVALGSCFANGRDLGEWIGASRNNI 1532 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 P + + P+ T + + + + + + Sbjct: 1533 FNFSPQEK------LYPMEIHLHAFETTQSTILNIPMAKYAFDF--------AQEHQDDN 1578 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 ++F+ SR + + YA A + T ++ S Sbjct: 1579 ILIFSPSRKSCIDSSLIFIQ-YAFENNLDLLRAEEEDLNSYLKAVTDGALKKSLTHGIGM 1637 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT-----------P 403 + ++ + RA+ ++ G L ++ T D + V+ + T Sbjct: 1638 IYAEMNAKDRAVVKKLYDYGALSILLVTKDCCH--DCPPSNRVVILGTQYYEGKEHRYVD 1695 Query: 404 LSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNP--- 460 S L+ + +KG +T+ D + V+ + P Sbjct: 1696 YSANQLLEMV--------NTTKG----KTKDDTTQALVLTNQKMKDYYKKFLSEGLPIES 1743 Query: 461 ------LDVLAQQTVAAA------AMDALQVDEWYSRVRRAAPWKDLPR-------RVFD 501 D L + + +D + +Y R+ + + Sbjct: 1744 FMFFHLYDALISEINTSVIQTKQDCVDWIAYTFFYRRIHGNPSFYGVKDVSAYGISAYLT 1803 Query: 502 ATLDMLSGRYPSGDFSAFR 520 ++ DF R Sbjct: 1804 ELVENTLRGLQECDFIELR 1822 >UniRef50_Q9XWI1 Protein Y54E2A.4, partially confirmed by transcript evidence n=5 Tax=Caenorhabditis RepID=Q9XWI1_CAEEL Length = 2017 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 139/684 (20%), Positives = 244/684 (35%), Gaps = 119/684 (17%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + F++ +Q + A ++ E+ L+ APTG+GKT A L L+ + +++R Sbjct: 306 FKGFEKLNVIQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILNTIHEH--QNSRGDIM 363 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 + +I+YI+P+KAL T++ + L + L+V TGDT + S+ Sbjct: 364 KDDFKIIYIAPMKALATEMTESFGKRLA------------PLGLKVKELTGDT---QLSR 408 Query: 143 LTRNPPDILITTPESLYLMLTSRARET--LRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 +L+ TPE ++ + + V +IIDEVH + +RG + + R Sbjct: 409 NEVADTQMLVLTPEKWDVITRKSTSDNSLINVVRLLIIDEVHLLHD-ERGPVIETLVART 467 Query: 201 DA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 + + + +GLSAT+ + DVA FL + + P VP+ Sbjct: 468 LRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLFFFDGRFRP-----VPLTQKFI 522 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 + A ++ + ++D V R +VF ++R KL + Sbjct: 523 GTRKAGNFRDN-----LTLMDNVCYDEVVDFVKRGHQVLVFVHTRNGTAKLGEAFCARAS 577 Query: 318 ARLQRSPSIAVDAAHFESTSGATS-------NRVQSSDVFIARSHHGSVSKEQRAITEQA 370 Q + D A + + ++ HH + ++ R + E+ Sbjct: 578 VLGQMDLFLPKDRASSKYIQADKAINICRNRAQISPLFQRGMGIHHAGLCRQDRILMERC 637 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGH-Q 419 G + + T++L G+++ A +VI+ T L V Q GRAG Q Sbjct: 638 FAEGHVSVLFCTATLAWGVNLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQIFGRAGRPQ 697 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE-----NLTPPHNPLDVLAQQTVAAAAM 474 G+ RD +D + + + +E L N L + + Sbjct: 698 FENEGHGIIITT--RDKIDKYLTM-LVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGV 754 Query: 475 DALQVDEWYSR----------------------------VRRAAPWKDLPRRV-FDATLD 505 + L Y+R +R AA D + + FD + Sbjct: 755 EWLTYTYMYTRALKNPMAYGIAYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATE 814 Query: 506 MLS----GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR---GMYSVL 558 L+ GR S + + + N + L VT +PD G+ S+ Sbjct: 815 YLNSTDLGRIASNFYVKYETIQLLNEAEKGVG-------LPVTFTSFMPDDMVIGLISMS 867 Query: 559 LPEGEEKAGSRRVGELDEEMVY-----------ESRVNDIITL-----GATSWRIQQITR 602 K +G+L+E M Y S + L TS R + Sbjct: 868 TEFANLKCREEEIGDLEELMSYGCMMNVRGGGLASVAGKVNVLLQSLISRTSTRNSALMS 927 Query: 603 DQVIVTPAPGRSARLPFWRGEGNG 626 +Q+ V GR R F NG Sbjct: 928 EQLYVQQNAGRLCRAMFEMVLKNG 951 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 116/542 (21%), Positives = 204/542 (37%), Gaps = 64/542 (11%) Query: 26 AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 F +Q Q + ++ + AL+ APTGSGKTL A L RL ++ Sbjct: 1176 NFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMF-RLLQDH----------P 1224 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +++YI+P+K+L + D+ +++ E + RV +GD Sbjct: 1225 GMKVVYIAPLKSLVRERV-----------DDWKKKFEDGMGYRVVEVSGDVTPDPEE--- 1270 Query: 145 RNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 ILITTPE + S A RE +R V +++DEVH + G RGA L + RL + Sbjct: 1271 LAASSILITTPEKWDGISRSWATREYVRRVGLIVLDEVHLL-GVDRGAVLEAIVSRLKMI 1329 Query: 204 LHT------SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 + +GLS + +A DVA +LG P++R I + + Sbjct: 1330 TRRSHVTEEPVRLLGLSTALANAGDVAEWLGIPDEACYNFRPSVRPVPISVHI------- 1382 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 G + R G + IL + ++F +SR L Sbjct: 1383 -----QGFPGQHYCPRMGLMNKPAYKAIL-TYSPRKPVLIFVSSRRQTRLTALAFVNLLI 1436 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNR-VQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 A + +D E A + ++ + F HH +S +RAI EQ ++ Sbjct: 1437 ADHNPKQWLNMDMLELEDLMAAIKDENLKLTLPFGIGMHHAGLSAHERAIVEQLFIEKKI 1496 Query: 377 RCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIGRAGH-QVGGVSK 425 + ++AT++L GI+ A ++++ V LQ +GRAG Q + Sbjct: 1497 QVLIATATLAWGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAV 1556 Query: 426 GLFFPRTRRDLVDSAVIVECM-FAGRLENLTPPH-NPLDVLAQQTVAAAAMDALQVDEWY 483 + + + + + E L + P H N A ++ L Y Sbjct: 1557 AVIYVQDAKKTFYKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLY 1616 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK--LVWNRETGILTARPGAQLL 541 R+ + L +A L ++ + + + + E ++ P ++ Sbjct: 1617 RRLFANPNYYGLEEDSEEAMLKFIT-KIVDDSVAELLASECIHVDSEQDVIKPTPCGRIA 1675 Query: 542 AV 543 +V Sbjct: 1676 SV 1677 >UniRef50_Q54G57 Activating signal cointegrator 1 complex subunit 3 n=6 Tax=Eukaryota RepID=HELC1_DICDI Length = 2195 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 103/505 (20%), Positives = 198/505 (39%), Gaps = 54/505 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR 71 + + +R F + K+ +Q + + A +S E+ L+ APTG+GKT A L L + Sbjct: 467 ESIAEISRAAF-GSIKKLNRIQSRVFESAYKSNENILISAPTGAGKTNIALLTILHEI-- 523 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 E + + +I+YI+P+KAL +++ LK + + Sbjct: 524 ESNINPYGYLDKDNFKIIYIAPLKALASEMVEKFSNSLKYL------------GIVSKEL 571 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL-RGVETVIIDEVHAVAGSKRG 190 TGD ++ I++TTPE ++ + L + V +IIDE+H + +RG Sbjct: 572 TGDMQLTQKE---LKETQIIVTTPEKWDVITRKSSDVALTKLVRLIIIDEIHLLH-EERG 627 Query: 191 AHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 L + R + T+ + +GLSAT+ + DVA F+ T + R Sbjct: 628 PVLECIVARTLRQVETTQEMIRIVGLSATLPNYKDVARFIRAPASGTHFFDSSYR----- 682 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 PV + V G + ++ + + ++F +SR K Sbjct: 683 ---PVPLTQNFIGVKDNQG---IMVMKNNMNQLCYERLEKSLKEGHQVMIFVHSRKDTVK 736 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L+++ + R + + S ++S HH + + R + Sbjct: 737 SAEILSDMAKEKHFRFSNEEPSFGAKKEFEKVKSKEIRSLFQHGISVHHAGLLRSDRNVV 796 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAG 417 E+ +G ++ +V T++L G+++ A ++I+ L ++ +Q GRAG Sbjct: 797 EKYFANGTIKVLVCTATLAWGVNLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAG 856 Query: 418 HQVGGVSKGLFFPRTRR------DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 S F ++ L+ S++ +E F LE+ N VL + Sbjct: 857 RPQFDTSGEGFLLTSKDKLDHYLSLMSSSMPIESKFITNLED---HLNAEIVLGTVSNVN 913 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLP 496 A++ L + R+ + +P Sbjct: 914 EAVNWLSYTYLFIRMLQNPLVYGIP 938 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 97/505 (19%), Positives = 189/505 (37%), Gaps = 61/505 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 L F +Q Q +H + + L+ +PTGSGKT+ A L ++FR+ Sbjct: 1321 LFKFSHFNPIQTQVFHTLYYTNNNVLLGSPTGSGKTICAELAMF-KVFRD---------- 1369 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 +++YI+P+KAL + + ++ + ++ ++ TGD + Sbjct: 1370 EPHMKVVYIAPLKALVRERMNDWKVKFQE-----------KLGKKLVELTGDYTP---NM 1415 Query: 143 LTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 + DI+ TTPE + + R + V +IIDE+H + G RG L + + R+ Sbjct: 1416 IALQNADIVTTTPEKWDGISRNWKNRSYVTSVSLLIIDEIHLI-GELRGPILEVIVSRMK 1474 Query: 202 AL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 + + + +GLS + +A D++ ++G DR P+ R I + + Sbjct: 1475 LISKQTGVNIRVVGLSTAMANAIDLSEWMGIDRVGLFNFRPSCRPVPIEVHI-------- 1526 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 G ++ R ++ I + ++F +SR L Sbjct: 1527 ----QGFQGKNYCPRMQTMNKPSFAAI-ATYSPKKPVLIFVSSRRQTRLTALDLISYLVV 1581 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 I + + ++ + F HH ++ R I E +++ Sbjct: 1582 DNDPLQWIQKGFDIEPTLARVKDQHLRHTLSFGIGMHHAGLNDGDRTIVESLFGENKIQI 1641 Query: 379 VVATSSLELGIDMGAVDLVIQ------------VATPLSVASGLQRIGRAGH-QVGGVSK 425 +++TS+L G+++ A ++I+ V PL+ LQ IGRAG Q K Sbjct: 1642 LISTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLT--DVLQMIGRAGRPQFDKEGK 1699 Query: 426 GLFFPRTRRDLVDSAVIVECM--FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 + + + + + + L N V A++ L ++ Sbjct: 1700 AMVMVHEPKKQFYKKFLYDPFPVESHLKDFLHDHLNAEIVSGTIQSKQGAINYLVNTFFF 1759 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLS 508 R+ + + L +A LS Sbjct: 1760 RRLVVSPSYYGLEDNSVEAVNQYLS 1784 >UniRef50_B6A9C7 Sec63 domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6A9C7_9CRYT Length = 2300 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 123/528 (23%), Positives = 202/528 (38%), Gaps = 72/528 (13%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYA 65 LP P + ++ +Q + +VA ++ LV APTGSGKT A L Sbjct: 459 IDELPKWCHPCFKSV---GIERLNLIQSKVCNVALNESDKNILVCAPTGSGKTNIALLCI 515 Query: 66 LDRLF------REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 L+ L E + +I+YISP+KAL T+ +L+I L+ Sbjct: 516 LNTLSLFMRKTSEFSVNEEFNFDTSKFKIVYISPMKALVTEQVESLRIRLR--------- 566 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV-ETVII 178 + + V TGDT S+ I ITTPE L ++ T + + L V + +II Sbjct: 567 ---PLGIVVNEMTGDTRV---SRSLMESTQIFITTPEKLDVI-TRKMSDGLSDVLKLIII 619 Query: 179 DEVHAVAGSKRGAHLALSLER-------LDALLHTSAQRIGLSATVRSASDVAAFLGGDR 231 DE+H + + RGA L + R +++LL + +GLSAT+ + DVA FL D Sbjct: 620 DEIHMLHDA-RGAVLEGLVARFKDNESQVNSLLKNKIRLVGLSATLPNYLDVARFLEVDP 678 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 V + P VP + G E R + + I+ V Sbjct: 679 RVGLFYFGPEYRP-----VP------LKQTYIGIREKKGFRRLQMLNSILYEKIMKSVKE 727 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA-----AHFESTSGATSNRVQS 346 H +VF +SR + + + + + ++ + SG S+ ++ Sbjct: 728 H-QILVFVHSRKDTIQTAKFIRDKATSDGLLNSFFPGNSNVSREILLDELSGIKSDNLKD 786 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP 403 HH + + R I E G ++ +V T++L G+++ A ++I QV P Sbjct: 787 VLPCGIAIHHAGLLRTDRKIVEDLFADGHIQILVTTATLAWGVNLPAHTVIIKGTQVYKP 846 Query: 404 -------LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGR 450 LS Q IGR G Q G+ + L + +E + Sbjct: 847 ETGQWSELSPLDIFQMIGRGGRPQYDIDGHGIIITDYQNLTYYSSLFNQQFYIESQLISK 906 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 L +L N VL + ++ Y R+++ L Sbjct: 907 LPDLI---NAEIVLGNIQGKLDVLKWIKKTFLYIRLKKNPKLYGLNVD 951 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 83/530 (15%), Positives = 180/530 (33%), Gaps = 89/530 (16%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLY---ALDRLFREGGE 75 +++ + AVQ Q +++ S + + A SG F+ A+ RL Sbjct: 1390 KEFNMNEITTFNAVQTQLFNILYNSNTNLFIAASPRSG----QFICTCIAISRLLEN--- 1442 Query: 76 DTREAHKRKTSRILYIS------PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + K +ILY+ P +A LK + + VN Sbjct: 1443 ----LEEPKFFKILYLCGNPEMLPYRA----------NKLKAVFGDIVGEFAGNVN---- 1484 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGS 187 GD ++ L +I+T + + +AR LR ++ +IID + ++ Sbjct: 1485 ---GDVEKTDKYPL-------IISTFDYWDKVSRKLVKARALLRNLKLLIIDHIELLSTI 1534 Query: 188 KRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 K G + ++ R+ L+ + IG S ++ +A DVA +LG + P++R Sbjct: 1535 KYGPIIESTISRIRYLISPLDIELRIIGYSMSISNAKDVAEWLGVSKDGIFSFHPSIRPN 1594 Query: 245 QIRIVVP-----------VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 IR+ + ++ + + + S Y ++ + + + Sbjct: 1595 PIRLSIKGFDSYYRSGRILSMIRQLPKYLQKYVMKTQTKISQSKTEYKDSQLDNNDIESA 1654 Query: 294 ST-IVFTNSRGLAEKLTARL--------NELYAARLQRSPSIAVDAAHFESTSGATSNRV 344 ST +++ + + L N Y ++ + + Sbjct: 1655 STLLIYVPDQETCTMVAKDLSFRMSELNNNNYCTLRSQTSINFEEFIKIYGNEMKLGKLL 1714 Query: 345 QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPL 404 + + H + SK + I +A K G + ++AT + +++ ++I Sbjct: 1715 EICMMLGIGFLHEAQSKYEFTIVLEAYKKGVITVLIATEDFKWKLNVQFTTVIIMDTQRF 1774 Query: 405 S----VASGLQRI------------GRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM- 446 V+ L+RI R ++G + + + + L ++ + Sbjct: 1775 DDDILVSRNLRRIINYSAIDMSCIVARCIRPKLGDIGNIILLCPSSKKLYYEYILNNAIP 1834 Query: 447 FAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 LE + N L ++D + +Y R+ + + L Sbjct: 1835 LESYLEYGIIDSINTEIALKVIKSRQDSIDWITWTFFYRRLSKNPTYYGL 1884 >UniRef50_B6H0I8 Pc12g14010 protein n=42 Tax=Saccharomyceta RepID=B6H0I8_PENCW Length = 2009 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 115/551 (20%), Positives = 212/551 (38%), Gaps = 60/551 (10%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR-------EGGE 75 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + + E E Sbjct: 277 FKGYKTLNRMQSLLYDVAYKTNENMLICAPTGAGKTDAAMLTVLNAVGKNTSPNPLENPE 336 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 T + +I+Y++P+KAL +V L L + ++V TGD Sbjct: 337 ATEFTVQVDDFKIVYVAPMKALAAEVTEKLGKRLAWL------------GIKVRELTGDM 384 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHL 193 +R + I++TTPE ++ E ++ V +IIDEVH + +RGA + Sbjct: 385 QLTKREIV---ETQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVI 440 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + IGLSAT+ + +DVA FL ++ + P V Sbjct: 441 ESLVARTQRQVESTQSLIRIIGLSATLPNYTDVADFLKVNKMAGMFFFDQSFRP-----V 495 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ G+ +I + D + R +VF +SR Sbjct: 496 PLEQ-----HFIGVKGKPGSKQSRDNIDSVAYEKVRDMMERGHQVMVFVHSRKDTVMTAR 550 Query: 311 RLNELYAARLQRSPSIAVDAAHF----ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L +L A + D ++ A + ++ +HH +++ R + Sbjct: 551 MLMQLAAEEGREDLFSCHDHENYSNALRDMKHARARELRDLFASGFGTHHAGMTRSDRNL 610 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRA 416 E+ G ++ + T++L G+++ A +VI Q+ P LS+ +Q GRA Sbjct: 611 MERMFSEGLIKVLCCTATLAWGVNLPAAAVVIKGTQLYNPQEGKFIDLSILDVMQIFGRA 670 Query: 417 GHQVGGVSKGLFFPRTRRDL---VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 G + F T L + + + + + L N L T A Sbjct: 671 GRPQFQDTGIGFICTTHDKLNHYLSAVTAQQPIESRFSSRLVDNLNAEISLGTVTSVPEA 730 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY----PSGDFSAFRPKLVWNRET 529 + L Y R++R + ++ R + +++N +T Sbjct: 731 VQWLGYSYLYVRMKREPRNYGIEFAELRDDPMLVQRRRQLILQAARVLQKSQMIIFNDKT 790 Query: 530 GILTARPGAQL 540 L A+ ++ Sbjct: 791 EDLKAKDVGRI 801 Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 106/532 (19%), Positives = 197/532 (37%), Gaps = 87/532 (16%) Query: 4 NPDPSSLLPDVFS-----------PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIA 51 PD S+ D+ + P + + + F+ +Q Q +H+ + + L+ + Sbjct: 1107 RPDTESVYTDLLNLQPLPISALKNPILEEIYGQRFQFFNPMQTQIFHLLYHTPANVLLGS 1166 Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 PTGSGKT+AA L ++ S+++YI+P+KAL + ++ + L Sbjct: 1167 PTGSGKTVAAELAM-----------WWAFREKPGSKVVYIAPMKALVRERVQDWRKRLTR 1215 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETL 170 ++ L++ TGD R T DI+ITTPE + S + R+ + Sbjct: 1216 -----------QMGLKLVELTGDNTPDTR---TIRDADIIITTPEKWDGISRSWQTRDYV 1261 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFL 227 R V VIIDE+H + G RG L + + R++ + S + +G+S +ASD+A +L Sbjct: 1262 RKVSLVIIDEIHLL-GGDRGPILEIIVSRMNYIASQSKGSVRLMGMSTACANASDLANWL 1320 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 G + P + + + + Sbjct: 1321 GVKEGLFNFRHSVRPVPLEIFIDGFPEQRGFCPLMQSMNRPTFLA-------------IK 1367 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQS 346 + IVF SR L + + E + + + ++ Sbjct: 1368 NHSPEKPVIVFVASRRQTRLTAKDLINYCGMEDNPRRFVRMSEDDLELNLARVKDDALRE 1427 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV--------- 397 + F HH + + R + E+ + +++ +VATS+L G+++ A +V Sbjct: 1428 ALNFGIGLHHAGLVESDRQLAEELFANNKIQVLVATSTLAWGVNLPAHLVVVKGTQFFDA 1487 Query: 398 -IQVATPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLT 455 I+ + + LQ +GRAG Q F + + + + L Sbjct: 1488 KIEGYRDMDLTDVLQMLGRAGRPQFDTSGIARIFTQDSK---------KAFYKHFLHTGF 1538 Query: 456 PPHNPLD-VLAQQTVAAA----------AMDALQVDEWYSRVRRAAPWKDLP 496 P + L VL A A+D L ++ R+ + + L Sbjct: 1539 PVESTLHKVLDNHLGAEVSAGTIGTQQDALDYLTWTFFFRRLHKNPSYYGLE 1590 >UniRef50_Q6FKF7 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida glabrata RepID=Q6FKF7_CANGA Length = 2140 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 105/494 (21%), Positives = 198/494 (40%), Gaps = 59/494 (11%) Query: 21 DWFLRAF-----KQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGG 74 W +AF +Q + +H A ++ L+ APTG+GKT A L L L + Sbjct: 474 KWAQKAFPSKEVTTLNYIQSKVYHKAFHDDKNLLMCAPTGAGKTNVAVLTILQVLSQYIN 533 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 EDT ++ K RI+Y++P+KAL + R + L + ++V TGD Sbjct: 534 EDT-DSLKLNDFRIVYVAPLKALVQEQVREFERRL------------SNFGIKVSELTGD 580 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAGSKRGAHL 193 T RS++ +L+TTPE ++ + + ++ +IIDE+H + +RG L Sbjct: 581 TTLT-RSEI--EKFQVLVTTPEKWDVLTRKNDENDIMLKLKLLIIDEIHLLND-QRGPVL 636 Query: 194 ALSLERLDA--LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 + R L ++ + I LSAT+ + VA FL + R Sbjct: 637 ESLIMRAKENCRLRSNPRIIALSATLPNYEQVAKFLQVPEESIYYFDNSYRP-------- 688 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 +S V G + + + + D V I+F +SR + Sbjct: 689 ----CPLSQVFCGVKSTNSVKKLSFVNEVCFEKVCDAVKDGHQVIIFVHSRKETTRTAKF 744 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNR--VQSSDVFIARSHHGSVSKEQRAITEQ 369 + + +++ + ++ + G S +++ HH ++++ R+++E Sbjct: 745 IADKFSSLEKNILFFEENSRSILKSEGENSKDIDLKTLLPQGIGIHHAGLARDDRSLSED 804 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------LSVASGLQRIGRAGH- 418 G LR +V+T++L G+++ A ++I+ + +P LS LQ +GRAG Sbjct: 805 LFADGVLRVLVSTATLAWGVNLPAHTVIIKGTDIYSPEVGNWIRLSPQDLLQMLGRAGRP 864 Query: 419 QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 + +G+ +++ + +E F L N L A Sbjct: 865 RYDTSGEGIIITNQTDIQYYLGILNQQLPIESQF---LSKFVDNLNAEISLGMVKTKLDA 921 Query: 474 MDALQVDEWYSRVR 487 ++ +Y R+ Sbjct: 922 KRWIKDSYYYVRLC 935 Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 124/371 (33%), Gaps = 63/371 (16%) Query: 26 AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 F +Q ++ E LV +P +GKT A L L + G Sbjct: 1333 GFNSLNKIQSDVFNEVYHGTESLLVCSPPCTGKTTLALLATLSHIINTKG---------- 1382 Query: 85 TSRILYISPIKALGTDV-----QRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 RI+Y+ G + I K I D +++VG G + Sbjct: 1383 --RIIYVV-----GNEKKLQSCYEKWMIFFKSIND----------SIKVGKLGG---NLQ 1422 Query: 140 RSKLTRNPPDILITTPESLYLMLTSRAR--ETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 + +T + I +T+P+ + + LT R R + L V+ ++ D++H + GA+ +++ Sbjct: 1423 DNLITFSHSHITLTSPQQVEV-LTHRWRKLKLLLDVDLLVFDDIHEIGQGLTGANYEIAV 1481 Query: 198 ER---LDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVT----VVNPPAMRHPQIRIVV 250 R + + + I S + + SD+A ++G + T + R I+ Sbjct: 1482 SRFNFIKTQADFNPRIIAFSNCLLNPSDIAGWIGVKKENTHNFATDEDQSYRVINIKAFE 1541 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 + D S+ + + + ++ ++ T + A + Sbjct: 1542 NIFANDYTRSMLLYATSFVLSSQSTLV---------------KNVLLVTTGKVGALRAAN 1586 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 + L + + + + S Q + H + + Sbjct: 1587 EILALLKSNSKLHKISEITDFGIDQQDMEKS--AQKYLSYGIGLCHEGMKHATISNIVNL 1644 Query: 371 LKSGELRCVVA 381 +G + +++ Sbjct: 1645 FNAGVISVLIS 1655 >UniRef50_B2AQ90 Predicted CDS Pa_4_4960 n=1 Tax=Podospora anserina RepID=B2AQ90_PODAN Length = 1381 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 128/560 (22%), Positives = 205/560 (36%), Gaps = 64/560 (11%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALD 67 LPD F F+ AVQ + + ++ + +V APTGSGKT L Sbjct: 131 EALPDKFRALF------PFEFFNAVQSKCFEAVYKTNNNVVVSAPTGSGKTAILELAICK 184 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G E+ +I+Y +P KAL + R+ + + L+ Sbjct: 185 LALDRGHEN---------FKIVYQAPTKALCAEKARDWEKKFGHMK------------LK 223 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT--SRARETLRGVETVIIDEVHAVA 185 TGDT E ++ I++TTPE + R L+ VE +IDEVH + Sbjct: 224 CAELTGDTSQAEMRRV--GDASIIVTTPEKWDSITRKWQDHRRLLQLVELFLIDEVHILK 281 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA L + R+ + T+ + I LSATV ++ D+A +LG R T + PA+R Sbjct: 282 DV-RGATLEAVVSRMKTI-GTNVRFIALSATVPNSDDIAQWLG--RDHTNQHLPALRETF 337 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH---RSTIVFTNSR 302 PV V G E + +++ + + + RH + +VF +R Sbjct: 338 GEEFRPVKLQKFVYGYECN-------GNEFILDKLLDSKLPNLIARHSQQKPILVFCFTR 390 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 E + L E AAR A + S +Q HH + + Sbjct: 391 KSCESTASLLAEYAAARPNTKLWPA-----PKGRIPVISRELQEIVKLGVAFHHAGLDVQ 445 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIG 414 R EQ+ GEL + TS+L +GI++ +V++ S +Q +G Sbjct: 446 DRGAVEQSFLKGELGVICCTSTLAVGINLPCHTVVLKGTMGYADDKLQEYSDLEVMQMLG 505 Query: 415 RAGH-QVGGVSKGLFFPRTRRDL-VDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAA 471 RAG Q + + + + V + + L NL N L A Sbjct: 506 RAGRPQFDDSATAIILTKAGNKARYEKMVSGQEILESTLHLNLIEHLNSEIGLGTIHDLA 565 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFD-ATLDMLSGRYPSGDFSAFRPKLVW-NRET 529 +A L R+RR + L + + +D D + + ET Sbjct: 566 SAKKWLSGTFLSVRLRRNPSFYHLTGSNCNPSQIDAKLEEICERDIKQLQDAQCVTDNET 625 Query: 530 GILTARPGAQLLAVTSGGTI 549 T A + T+ Sbjct: 626 FKSTYYGRAMSKYMVEFSTM 645 >UniRef50_UPI0001791CD4 PREDICTED: similar to pre-mRNA-splicing helicase BRR2 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791CD4 Length = 2093 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 119/614 (19%), Positives = 221/614 (35%), Gaps = 86/614 (14%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P LP PA D FK +Q + A S E+ L+ APTG+GKT A L Sbjct: 465 PIDKLPKYVQPAFED-----FKSLNRIQSRLQKSALESDENLLLCAPTGAGKTNVALLCM 519 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + + D +I+YI+P+++L ++ + L + N Sbjct: 520 LREIGKHINSDG--TINADEFKIIYIAPMRSLVQEMVGSFGKRL------------SSYN 565 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAV 184 L V TGD + ++ I++ TPE ++ + + V +IIDE+H + Sbjct: 566 LTVSELTGD---HQLTREQIQATQIIVCTPEKWDIITRKGGEKTFVSLVRLIIIDEIHLL 622 Query: 185 AGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 +RG L + R + + +GLSAT+ + DVA L + + Sbjct: 623 HD-ERGPVLEALVARTIRNIETIQEDVRLVGLSATLPNYQDVATLLRVNPDTGLFYFDNS 681 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P VP+ G E R + + I++ R+ +VF +S Sbjct: 682 FRP-----VPLEQQ------YIGITEKKAVKRFQVMNEIVYEKIMEHAGRN-QILVFVHS 729 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHG 357 R K + ++ + + +A E + ++ + HH Sbjct: 730 RKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNQELRDLLPYGFAIHHA 789 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVA 407 +++ R + E ++ +++T++L G+++ A ++I QV +P L Sbjct: 790 GMTRVDRTLVEDLFADRHIQVLISTATLAWGVNLPAHTVIIKGTQVYSPEKGRWVELGAL 849 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPL 461 LQ +GRAG Q +G+ L++ + +E +L ++ N Sbjct: 850 DVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQMVSKLPDML---NAE 906 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP-----SGDF 516 VL A+ L Y R+ R+ + + +L + Sbjct: 907 IVLGTIQSVKEAVTWLGYSYLYIRMLRSPALYTITPEKLE-VDPLLETHRADIIHTAAIQ 965 Query: 517 SAFRPKLVWNRETGILTARPGAQL---LAVTSGG----------TIPDRGMYSVLLPEGE 563 + ++R++G ++ T T+ + ++ V GE Sbjct: 966 LERSNLIKYDRKSGYFQVTELGRIASHYYCTHDTMATYNQLLKPTLSEIELFRVFSLSGE 1025 Query: 564 EKAGSRRVGELDEE 577 R +G DEE Sbjct: 1026 F----RHIGVRDEE 1035 Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats. Identities = 80/458 (17%), Positives = 157/458 (34%), Gaps = 37/458 (8%) Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETL 170 I + +V + TG+ + I++TT E ++ + R+ + Sbjct: 1339 IYSSWHVIFGIGLARKVVLLTGEIGTDLK---LLAKGQIIVTTAEKWDVLSRRWKQRKNV 1395 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFL 227 + + I+DE+ + G G L + R+ + + + LSA + A D+A +L Sbjct: 1396 QNINLFIVDELQLIGGED-GPVLEIVCSRMRYIASQTEKQMRVVALSAPLADARDLALWL 1454 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 G T P++R + + V G +A R ++ IL Sbjct: 1455 GAPATTTFNFHPSVRPVPLELHV------------QGYNVTHNATRLVAMGKPTYNAILK 1502 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR-VQS 346 L + I+F SR A L AA Q + I + + S++ ++ Sbjct: 1503 YSLE-KPVIIFVPSRKQARLTAIDLLTYTAADNQSNRFIHAEEDDIKPFVEKISDKTLKE 1561 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI-------- 398 + + H VS + + +Q +G ++ VV T SL + + + ++I Sbjct: 1562 TLLQGVAYLHEGVSSQDQRWVQQLFFTGAIQVVVVTRSLCWALSITSHLVIIMDTQFYDG 1621 Query: 399 --QVATPLSVASGLQRIGRAGHQV-GGVSKGLFFPR-TRRDLVDSAVIVECMFAGRLEN- 453 + +Q +GRA + SK + + +++D + L++ Sbjct: 1622 KTHAYEDYPITDVIQMVGRANRPLDDDDSKCVLMCQSSKKDFFKKFLNEPLPVESHLDHR 1681 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG--RY 511 L N V A+D + Y R+ + A + +L D LS Sbjct: 1682 LHDHFNAEIVTKTIENKQDAVDYMTWTFLYRRLTQNANYYNLQGVSHRHLSDYLSELVET 1741 Query: 512 PSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 D + + + + I + TI Sbjct: 1742 TLNDLNQSKCISIEDEIDCIPLNLGMIAAYYYINYTTI 1779 >UniRef50_D0NDF2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDF2_PHYIN Length = 2164 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 125/533 (23%), Positives = 206/533 (38%), Gaps = 65/533 (12%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAF 62 +P P L D P + ++ F+ +Q Q +H ++ + L+ APTGSGKT+ A Sbjct: 1272 HPQPLQSLDD---PVYQALYVGKFQYFNPIQTQAFHQLYHQNGNVLLCAPTGSGKTVCAE 1328 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L + A + S I+YI+P+KAL + + + R+ Sbjct: 1329 LAMLRVWKQLQESSQGSARRTCQSLIVYIAPMKALAREKVAEWKTRFENNPQLRK----- 1383 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR--ARETLRGVETVIIDE 180 +V TGDT LT+ DI++TTPE L+ S R + + V++DE Sbjct: 1384 ----KVVEVTGDTLVNVDFILTK--ADIVVTTPEKWDLLTRSSSIGRALMTQMALVVVDE 1437 Query: 181 VHAVAGSKRGAHLALSLERLDAL--LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 VH V + RGA L + + RL + IGLS + +A DV +LGG NP Sbjct: 1438 VHLVGEAPRGAVLEVLISRLRRFQRSGPPIRVIGLSTALANAGDVGRWLGGITSSHAKNP 1497 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + R V MD G E + R ++ I + +VF Sbjct: 1498 DVGQVYNFRASVRPVPMD---VHIQGFPERHYVARMAAMNKPTFMAI-KTHSPDKPVLVF 1553 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT---SNRVQSSDVFIARSH 355 +S+ + L + A + +D A +S ++ ++ + F H Sbjct: 1554 VSSKAQTKLTALDLIQFCVADDGDKRFLKMDEAVMDSICQSSQIGDETLKHTLSFGIGLH 1613 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLS 405 H +++ RA+ E+ + ++ V++TS+L G+++ A +V++ PLS Sbjct: 1614 HAGLARRDRALVEKLYRDRLIQVVISTSTLAWGVNLPAHLVVVKGTEYFQNGRYRSYPLS 1673 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE---CMFAGRLENLTPPHNPL- 461 LQ IGRAG P V ++ E M L + L Sbjct: 1674 --DLLQMIGRAGR-----------PLLDDKGVACVLVEESKKNMTQRFLYEPLAVESCLG 1720 Query: 462 --DVLAQQTVAAAAMDALQVDE----------WYSRVRRAAPWKDLPRRVFDA 502 VLA A A ++ + RV + + + V A Sbjct: 1721 GNAVLANHLNAEIAAGLVRSTRDVMDYLSWSLLFQRVLKNPSFYGVGTEVVAA 1773 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 113/609 (18%), Positives = 217/609 (35%), Gaps = 97/609 (15%) Query: 24 LRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + +Q + ++ A +++ LV APTG+GKT A L L + + ++ +H Sbjct: 354 FHGITELNRLQSKLFNAAYTSNQNLLVCAPTGAGKTNVAMLTILQEVKTQLSRES--SHG 411 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 +I+Y++P+KAL +V LK + L+V TGD ++ Sbjct: 412 VANMKIIYVAPMKALAQEVVTKFGQRLKALK------------LKVRELTGDMQLTKKE- 458 Query: 143 LTRNPPDILITTPESLYLMLT--SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 +++TTPE ++ S + L V+ +IIDEVH +A +RG + + R Sbjct: 459 --IEETHVIVTTPEKWDVITRKSSTQQSLLSQVKLLIIDEVHLLAD-ERGPVIETIVART 515 Query: 201 DALLHTS---AQRIGLSATVRSASDVAAFL----------------GGDRPVTVVNPPAM 241 + ++ + +GLSAT+ + DVA+FL G + Sbjct: 516 LRRVESTQSMIRIVGLSATLPNYVDVASFLRVYVPSGDSRMQNAATNGGKGGLFFFDATY 575 Query: 242 RHPQI----------------------RIVVPVANMDDVSSVASGTGEDSHAGREG--SI 277 R + + A+ +D++ G R+ + Sbjct: 576 RPVPLDQTFIGVSTNASLKEALGLSAAELSTVTASEEDLAKEKKAVGATMSKQRQIQLMM 635 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR---------SPSIAV 328 L +V +VF +SR + EL + + + Sbjct: 636 NKLTLAHCLKQVQHSEQVMVFVHSRKETAATMHSIVELARGNEEEPGTLEAFLPPSELQM 695 Query: 329 DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 E + + ++ + HH + + R +TEQ + G +R + T++L G Sbjct: 696 PLNLQERVQKSRNKELKELLGYGLGIHHAGMLRSDRNLTEQLFELGYIRVLCCTATLAWG 755 Query: 389 IDMGAVDLVIQVA----------TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD--- 435 +++ A ++I+ T LS+ +Q GRAG S T+ Sbjct: 756 VNLPAHSVLIKGTQVYNADKGGMTQLSMLDVMQIFGRAGRPQYDTSGDAVLVTTQEQLPH 815 Query: 436 ---LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 L+ + + +E ++ L N V + A L Y R+R+ Sbjct: 816 YLRLLTTGIPMESAL---IKALPDHLNAEIVSGTVSNLEEACTWLSYTYLYVRMRKNPLA 872 Query: 493 KDLPRRVFDATLDMLSGRY-----PSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + + +++ R + +A R + + + + + G AVTS G Sbjct: 873 YGMKLDDVNEDPMLVARRRQLLMDAAEKLAACRMIKILREKVRLDSDQEGKIAFAVTSMG 932 Query: 548 TIPDRGMYS 556 + Sbjct: 933 RVASHFYIQ 941 >UniRef50_A5E7Q8 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E7Q8_LODEL Length = 2016 Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 116/505 (22%), Positives = 197/505 (39%), Gaps = 56/505 (11%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAF-----KQPTAVQPQTWHVAA-RSEHALVIAPTGSGK 57 N + LLP PA W F +Q + + A E+ L+ APTG+GK Sbjct: 345 NVEKDELLPTSSLPA---WAREVFPTNETTTFNRIQSKIYPKAFGSDENLLICAPTGAGK 401 Query: 58 TLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T A L L + D A + +I+YI+P+KAL + R Q Sbjct: 402 TNVAMLTMLRAISNHRFND---AINKDQFKIVYIAPLKALVLEQVREFQ----------- 447 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVI 177 RR L V TGD + ++LITTPE ++T E L ++ VI Sbjct: 448 RRLTPVFGLVVNELTGDASLSQ---QQIKETNVLITTPEKWD-IITRENHEYLSLIKLVI 503 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 IDE+H + +RG L + R++ + +GLSAT+ + +DVA F+G + Sbjct: 504 IDEIHLLHD-QRGPVLESIIARINRDQENEVRIVGLSATLPNYNDVAKFIGANEEGIFYF 562 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 + R + V + + +I + + ++ IV Sbjct: 563 DLSYRPCPLEQKFVV------------IKDQKALKKRLAIDEACYDLVHKTLKQNHQLIV 610 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH---FESTSGATSNRVQSSDVFIARS 354 F + R L + +A D+ + ++ T+ ++Q + Sbjct: 611 FVHLRNETVSTAEYLINRLLDQELDLNLVAEDSTREILSQESAQVTNAKLQRILGSGIGA 670 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------L 404 HH +SKE+R + E G L+ +V+T++L G+++ A ++I+ V +P L Sbjct: 671 HHAGLSKEERTLVEDLFAQGHLKVLVSTATLAWGVNLPAHTVIIKGTEVYSPESGSWMQL 730 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVEC--MFAGRLENLTPPHNPL 461 S Q +GRAG + +G+ A++ + + + L L N Sbjct: 731 SPQDVFQMLGRAGRPRYDKNGEGVIITTQDEIQYYLAILNQQYPIESQMLNKLIDSMNAE 790 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRV 486 V +A+D L Y R+ Sbjct: 791 VVRGSIKTLESAVDWLGHTYLYVRM 815 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 65/420 (15%), Positives = 141/420 (33%), Gaps = 61/420 (14%) Query: 114 DERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRG 172 D+ +R + TGD N I++ PE Y ++ + +++R Sbjct: 1268 DQYVQRFAKSNEANIFKLTGDLKID---VQGYNKSQIIVGKPEYFYSLVRRWKTLKSVRS 1324 Query: 173 VETVIIDEVHAVAGSKRGAHLALSLERLDAL-----LHTSAQRIGLSATVRSASDVAAFL 227 + +I+D++H + + L R+ L TS + + +S + DV +L Sbjct: 1325 IGLLILDDLHLMEANP---VYEFLLTRVRLLRSQYSHETSLRLVAISYPLMDVRDVCTWL 1381 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 + V P ++R I + + + D+ + S GE + + Sbjct: 1382 DIKKANIVNFPASVREHDI-LQIDLTIDDNSNVNGSDDGEHEYL-----------NDVPS 1429 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSS 347 + + +++ NS +A K+ + + I + S ++ + Sbjct: 1430 YIEMGKKVLIYANSNEMALKIAKQ------SAFNFKAGIDAQKFVDKVKSVQLKAFLKDA 1483 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT----- 402 V + + + K I + +G + ++AT E D + V+ + Sbjct: 1484 GVALYLNTFSDLDK---KIAKHLFANGTVSVLIATRESE---DFSILADVVMIDKTQYLD 1537 Query: 403 -------PLSVASGLQRIGRA-------GHQVGGVSKGLFFPRTRRDLVDSAVIVECMFA 448 +V + IG + GH S + +++ ++VE Sbjct: 1538 NYEHREIDYNVTTIFDMIG-SCLSLQNDGHIYMQTSSEMV--NYYLSFINTGIMVESQLR 1594 Query: 449 GRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 + +D L +Q A +D L +Y R+ + + D + LS Sbjct: 1595 SHVHEFFI-AGIVDKLLRQR--AECLDLLTHSFFYRRLLSNPSYYNCKDISSDGLSEYLS 1651 >UniRef50_C4FC75 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC75_9ACTN Length = 838 Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats. Identities = 147/712 (20%), Positives = 246/712 (34%), Gaps = 127/712 (17%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLF 70 + ++P +D+ + ++ ++Q +E + L+ A T SGKT AAF L + Sbjct: 5 NRYAPFIQDFIYAHNWENLRSIQVAAADAIFNTEDNVLLTASTASGKTEAAFFPILTEFW 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + T LYI P+KAL D + L K E + V Sbjct: 65 E---------NPPATVGALYIGPLKALINDQFQRLDALCK------------EAGIPVWR 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR---ETLRGVETVIIDEVHAVAGS 187 GD + ++KL + P IL TPESL +L R + V+IDEVH++ Sbjct: 104 WHGDVSSSHKAKLLKKPSGILQITPESLEALLLHRHAAVGRLFGDLRYVVIDEVHSLLRG 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--GGDRPVTVVNPPAMRH-- 243 RG +ERL + + +RIGLSAT+ AFL G R + R Sbjct: 164 DRGGQALCLIERLSRMAGVNPRRIGLSATIGDPERTGAFLSSGTGRGCVIPRFEEPRRTW 223 Query: 244 ----PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE----------------- 282 + P A V ++ + + H G + E Sbjct: 224 RLSMEHFYMAGPQALERAVEALGALEADVVHGGNPHEPYADDEVCIDALPSGEIMARTDI 283 Query: 283 --------TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE 334 G + E R R +VF NSR AE + + L A+ + + Sbjct: 284 APQEADPGLGYIFEHTRGRKCLVFVNSREEAEAVCSCLRSYCEAQHEPGRFL-------- 335 Query: 335 STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR-CVVATSSLELGIDMGA 393 HHG++S R E+ ++ E R V T++LELGID+G Sbjct: 336 -------------------IHHGNLSASYRESAEELMRDDEQRQTTVTTATLELGIDIGR 376 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQV------------GGVSKGLFFPRTRRDLVDSAV 441 ++ Q+ P +V+S LQR+GR G + + + L+ Sbjct: 377 LERAFQIDAPFTVSSFLQRMGRTGRRDLPPEMHFVMREEQPEPRAMLPETIPWKLIQGIA 436 Query: 442 IVECMF-AGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVDEWYSRVRRAAPWKDLPRRV 499 +V+ +E P +L Q ++ A L E +RV + + + Sbjct: 437 LVQLYREEHWVEPPALDRLPYSLLYHQVMSTLASCGELTPAELANRVLTLSYFHRISADD 496 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 L L I G ++ ++ Y+V Sbjct: 497 LRCLLHHLI------------------ETEHIEVTEGGGIIVGLSGERITNSFKFYAVFQ 538 Query: 560 PEGE--EKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 E + S +G + V + I + W ++++ + +V R+ Sbjct: 539 ENEEFSVRCESAELGTI----VNPPPAGERIAIAGHCWLVEEVDWKRHLVY-CTQVKGRV 593 Query: 618 PFWRGEGNG-RPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGL 668 P + G+ G + E + L + G LA+ +A G+ Sbjct: 594 PAYFGDCAGDIDTHVLERMRRVLEENDVYPYLMGNARARLAQARHVAANAGI 645 >UniRef50_B4ITW8 GE23129 n=1 Tax=Drosophila yakuba RepID=B4ITW8_DROYA Length = 1733 Score = 318 bits (816), Expect = 9e-85, Method: Composition-based stats. Identities = 108/508 (21%), Positives = 191/508 (37%), Gaps = 67/508 (13%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 P LP P FK +Q + + A S E+ L+ APTG+GKT A L Sbjct: 462 QPVDKLPKYVQPV-----FEGFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLT 516 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 + + + ED + +I+Y++P+K+L ++ N L Sbjct: 517 MMREIGKHINEDG--TINAQDFKIIYVAPMKSLVQEMVGNFGRRLA------------CY 562 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHA 183 NL V TGD + ++ +++ TPE ++ R + V VIIDE+H Sbjct: 563 NLTVSELTGD---HQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHL 619 Query: 184 VAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + +RG L + R + T + +GLSAT+ + DVA FL + Sbjct: 620 LHD-ERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDN 678 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + G E R + + ++ R+ +VF + Sbjct: 679 SYRPV-----------SLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRN-QVLVFVH 726 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHH 356 SR K + ++ + + +A E + ++ + HH Sbjct: 727 SRKETGKTARAVRDMCLEQDTLGSFLKEGSASMEVLRTEAEQVKNTELKELLPYGFAIHH 786 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSV 406 +++ R + E ++ +V+T++L G+++ A ++I QV P LS Sbjct: 787 AGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSA 846 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 LQ +GRAG Q +G+ L++ + +E F +L ++ N Sbjct: 847 LDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDML---NA 903 Query: 461 LDVL--AQQTVAAAAMDALQVDEWYSRV 486 VL Q A++ L Y R+ Sbjct: 904 EIVLGTVQHL--QDAVNWLGYTYLYIRM 929 Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats. Identities = 87/505 (17%), Positives = 171/505 (33%), Gaps = 49/505 (9%) Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 AL + R + +R +Y+ +AL V + + Sbjct: 944 ALRLILXXXFAIMRLFTTQSDARCVYLVSQEALADLVFADWHNKFGSL------------ 991 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHA 183 +++V TG+T + ++ITT + ++ + R+ ++ V I+DE+ Sbjct: 992 DIKVVKLTGETGTDLK---LIAKGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQL 1048 Query: 184 VAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 V G G + + R+ + + + + LSA++ A DVA +LG + T P+ Sbjct: 1049 VGGED-GPVMEIVCSRMRYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPS 1107 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 +R + + + G +A R ++ + IL + H+ IVF + Sbjct: 1108 VRPIPLELHI------------QGYNVTHNATRIATMSKPVYNAIL-KYSAHKPVIVFVS 1154 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGSV 359 SR A + A+ LQ + + + T ++ + H + Sbjct: 1155 SRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLHEGL 1214 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI----------QVATPLSVASG 409 S + EQ SG ++ V + L G+ + A ++I + Sbjct: 1215 SASDHRLVEQLFDSGAVQVAVVSRDLCWGMSISAHLVIIMDTQFYNGKNHSYEDYPITDV 1274 Query: 410 LQRIGRAGH-QVGGVSKGLFFPR-TRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLAQ 466 LQ IGRA +K + + +++D + L++ + N V Sbjct: 1275 LQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTKT 1334 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG--RYPSGDFSAFRPKLV 524 A+D L Y R+ + + +L D LS D + V Sbjct: 1335 IENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISV 1394 Query: 525 WNRETGILTARPGAQLLAVTSGGTI 549 + + + TI Sbjct: 1395 EDDMDTLPLNLGMIAAYYYINYTTI 1419 >UniRef50_B7G2L8 Predicted protein n=2 Tax=Eukaryota RepID=B7G2L8_PHATR Length = 2189 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 121/560 (21%), Positives = 223/560 (39%), Gaps = 66/560 (11%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR---- 71 P+ + ++ VQ + VA RS E+ L+ APTG+GKT A L ++ L + Sbjct: 493 PSWTHAAFKGMEKLNRVQSKLCDVALRSSENLLLCAPTGAGKTNVACLTMMNILGQYRRD 552 Query: 72 ---EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + D +++ + +I+Y++P+KAL +V +N L+ + V Sbjct: 553 RQVDDDPDAKDSFDLSSFKIVYVAPMKALVQEVVKNFSERLEDY------------GVTV 600 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGS 187 +GD+ S+ + +L+TTPE ++ R + V+ VI+DE+H + Sbjct: 601 RELSGDSSL---SRQQISETQLLVTTPEKWDVVTRQGEGRAFTQLVKLVIVDEIHLLHD- 656 Query: 188 KRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 +RG L + R+ + T + +GLSAT+ + +DVA FL D + P Sbjct: 657 ERGPVLESIVARIIRQVETTSEPVRLVGLSATLPNYTDVATFLRVDHNKGLFFFDHSYRP 716 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 VP+ G E + R +++ ++F +SR Sbjct: 717 -----VPLQMQ------YIGLTERNAFRRFQLQNEICYEKAIEQRRNGNQMLIFVHSRAE 765 Query: 305 AEKLTARLNELYAARLQRSPSI----AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 K L +L R + + + A E +S + ++ + HH ++ Sbjct: 766 TGKTAKALRDLALERDESTNFVREKGATQEILREESSAVKNADLKDVLPYGFAIHHAGMA 825 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGL 410 +E R + E + +V T++L G+++ A ++I Q+ P LS L Sbjct: 826 REDRELVEDLFADRHIAVLVCTATLAWGVNLPAHAVIIKGTQIYDPSKGRWAELSPLDVL 885 Query: 411 QRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVL 464 Q +GRAG Q +G+ + L + + VE ++ L N VL Sbjct: 886 QMLGRAGRPQYDSEGEGIILTQHSELQYYLSLTNLQLPVESQL---IKTLPDHLNAEIVL 942 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--DATL--DMLSGRYPSGDFSAFR 520 + A+D L + R+ + + F D TL L + + Sbjct: 943 GTIQTISEAVDWLGYTFLFVRMLQNPNLYGISETSFLDDRTLKKRRLDLAHSAASILEKS 1002 Query: 521 PKLVWNRETGILTARPGAQL 540 + ++R++G L A P ++ Sbjct: 1003 HLVRYDRKSGALQATPLGRI 1022 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 100/577 (17%), Positives = 189/577 (32%), Gaps = 84/577 (14%) Query: 9 SLLPDVFS-PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYAL 66 LLP A + F A+K+ +Q Q +H ++ ++ LV AP+G+GK+ A L Sbjct: 1342 PLLPSALGVSALSEIF--AYKEFNPIQTQVFHELFKTDKNCLVCAPSGAGKSTCAVFAVL 1399 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 L +YI+P A+ + + R G + Sbjct: 1400 RMLTTNADGV-----------CVYIAPTDAIAD----------RTFTEWRLLFGRILPSS 1438 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAV 184 + +G+T + L++ ++ + + M++ R R+ ++ V +I DE+H + Sbjct: 1439 SIVRLSGETGP-DLKLLSQGK---VVVSSAKQWDMVSRRWKQRKAVQNVALMIFDELHFL 1494 Query: 185 AGSKRGAHLALSLERLDALLH--------TSAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 G G L + + R ++ + + +GLSA++ +A DV ++G Sbjct: 1495 GGII-GPTLEVVISRTRYMIGQSEDGKTVANMRIVGLSASLANARDVGEWMGVSGKSLFN 1553 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 R + I + +++ R ++ + + + + + I Sbjct: 1554 FSSKARPMPLEIFF------------QSFEQANYSARLMAMAKPVFSAVERHIGEG-TAI 1600 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRS--PSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 VFT SR A+ L + S E S +Q Sbjct: 1601 VFTPSRRQAQLTAIDLMTFRDGQGLGSYVGKSVDTLTLAEIASTLREPALQQVVTNGIGF 1660 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI------------QVAT 402 H + SG LR +V + + I ++I + Sbjct: 1661 LHAGMIDSDWNTVVDLYNSGALRILVCPTDVCWKIRCVGRLVIIMGTEVYDGREGRHLDY 1720 Query: 403 PLSVASGLQRIGRAGHQVGGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLEN-LTPPHNP 460 P V L IGR H K + +D + + L++ L P N Sbjct: 1721 P--VMDILHMIGR--HDPRSSGKCVLLCHAPKKDYLKKLIYDPVPIESHLDSYLHDPLNA 1776 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 V + A+D L Y R+ + + L S + S S Sbjct: 1777 EVVTKTVSSMQDAIDYLTWSFLYRRLPQNPTYYGL---------RGTSNVFLSEYLSEMI 1827 Query: 521 PKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 ++ + E + ++ + G I Y V Sbjct: 1828 ETVIGDLEESKCCSMSEEGDISPLNLGMI--AAYYYV 1862 >UniRef50_B6KDV2 Sec63 domain-containing DEAD/DEAH box helicase, putative n=3 Tax=Toxoplasma gondii RepID=B6KDV2_TOXGO Length = 2198 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 107/523 (20%), Positives = 188/523 (35%), Gaps = 59/523 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTL 59 AD P S LP+ PA + + +Q + + VA E+ L+ APTG+GKT Sbjct: 508 ADARQPISALPEWAQPA---FSCVNIETLNPMQSKVFRVAFEEFHENLLLCAPTGAGKTN 564 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 A L L+ + R T A + +++YISP+KAL + + L+ Sbjct: 565 VAMLAILNVIGRHRNAKT-GAVDLASFKVVYISPMKALVAEQVQAFSQRLQ--------- 614 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVII 178 + V TGD ++ +++TTPE ++ R + V VII Sbjct: 615 ---PYGVSVRELTGDVNL---TRQQIEETQVIVTTPEKWDIITRKAGERAYTQLVRLVII 668 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTV 235 DE+H + + RG L + R + T + +GLSAT+ + DVA L + Sbjct: 669 DEIHLLHDA-RGPVLESIIARTIRQIETAQEHIRLVGLSATLPNYDDVAVCLRVAPEKGL 727 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 P + G + R ++ +++ + Sbjct: 728 FFFGNHYRPV-----------PLKQTYIGIKDKKAIKRYNTMNEVTYEKLMESAGKS-QV 775 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFI 351 ++F +SR K + ++ R + A E + ++ + Sbjct: 776 LIFVHSRKETVKTARFIRDMAMQRDTLPRFLQHMTASREILQSEAEAVKTGDLKELLPYG 835 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP----- 403 HH + + R + E ++ +V+T++L G+++ A ++I QV P Sbjct: 836 FAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGAW 895 Query: 404 --LSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-----LTP 456 LS LQ +GRAG S +L + +E+ L Sbjct: 896 AELSPMDVLQMMGRAGRPQYDTSGHAILITQHSEL--QYYLSLNNQQLPIESQMLSCLPD 953 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRV 499 N VL A++ L Y R+ + +P Sbjct: 954 MLNAEVVLGSVRSREDAVNWLGYTYLYVRMLKNPSLYGVPPED 996 Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats. Identities = 98/530 (18%), Positives = 189/530 (35%), Gaps = 54/530 (10%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P + L D + +FK +Q Q + + E+ L+ P SGK Sbjct: 1360 PLPITALRDA---KMEQVYSGSFKAFNPIQTQVFSTLFATNENVLLCLPPTSGK-EICLE 1415 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISP--IKALGTDVQRNLQIPLKGIADERRRRGE 121 +AL R+ + + +YI+P + V+ L+ + + Sbjct: 1416 FALLRMVKTEPASQW--------KAVYIAPHPLV-----VKERLEDWVTKLGR------- 1455 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDE 180 + L++ TG+ + +++ TPE+ + + R+ L+ + +++D+ Sbjct: 1456 -GLGLKLAELTGEMQHDMK---LVEQSQLILATPENWDFVSRRWKTRKALQSIRLLLVDD 1511 Query: 181 VHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +H + S G+ L + L R + L + + ++ ++ +A DV +LG Sbjct: 1512 LHLLNSSV-GSTLEICLSRTRYISAQLQRPIRIVAMANSLANAKDVGDWLGVSSSGLFNF 1570 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 P++R + I + ++ + + + + Y + + ++ IV Sbjct: 1571 HPSVRTVPLEISLHGFDVYHREARLLAMSKAVYQA----VKLYTRDDDRSTLKKLKNVIV 1626 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAV-DAAHFESTSGATSNRVQSSDVFIARSHH 356 F + R L AA + V D + TS + + + H Sbjct: 1627 FCSDRRHCRLTAIDLLLQAAADDDPKKFLHVSDEVMRKYTSVVRDKMLSETLAYGVGLLH 1686 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI--------QVATPLSVAS 408 +S ++ + +Q +G ++ VV G+ M A +VI +VA Sbjct: 1687 SGLSAAEQQLVQQLHAAGAIQVVVVAEECAWGLQMYAHLVVIVDTKKFTENGYEDYTVAD 1746 Query: 409 GLQRIGRAGH---QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE-NLTPPHNPLDVL 464 LQ +G A G + LF P ++R+ V +LE NL N VL Sbjct: 1747 VLQMLGHATRPSIDKHGFAV-LFCPSSKREFYKKFVFEPLPVESQLEQNLVDHINAEVVL 1805 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG 514 A+D L Y R+ + + L D LS S Sbjct: 1806 KTIENKQDAVDWLTWTFLYRRLAKNPNYYGLQGVSHQHLSDYLSELVESS 1855 >UniRef50_Q6C0Y6 YALI0F20724p n=1 Tax=Yarrowia lipolytica RepID=Q6C0Y6_YARLI Length = 2106 Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats. Identities = 111/515 (21%), Positives = 187/515 (36%), Gaps = 66/515 (12%) Query: 5 PDPSSLLPDVFSPATR-----DWFLRAF---KQPTAVQPQTWHVAARSE-HALVIAPTGS 55 P P +PD W F K +Q + + A S+ + L+ APTG+ Sbjct: 420 PAPERAIPDANEKVVSIADMPSWTHVGFSDTKSLNRIQSKVFPCAFESDDNMLICAPTGA 479 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKT AFL L L + + +++YI+P+KAL + R L Sbjct: 480 GKTNVAFLAMLRCLSHFRAPNG--GFRTNDFKMVYIAPLKALVQEQVREFSKRL------ 531 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG-VE 174 + L+V TGD +K +L+TTPE ++ A + V Sbjct: 532 ------NSMGLKVSELTGD---HNLTKQQIAETQLLVTTPEKWDVITRKAADSSYTNLVR 582 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDR 231 ++IDE+H + +RG L + R + +GLSAT+ + DVA+FL Sbjct: 583 LIVIDEIHLLHD-ERGPVLESIVARTTRRSEQTGDPVRIVGLSATLPNFKDVASFLRVGE 641 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 R P+ G E R ++ +++ + Sbjct: 642 TGLFYFDSTFRP------CPLGQR------FLGITEKKAFKRYTAMNDACFDKVIENIKA 689 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFI 351 IVF +SR K L + A D + A + ++ I Sbjct: 690 GHQVIVFVHSRKETAKTARMLRDRAMDEGLLPLFCASDGSRRTLAERAQDPELDATQKEI 749 Query: 352 A----RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP- 403 +HH +++ R E+ G +R +V+T++L G+++ A ++I Q+ P Sbjct: 750 IGTGLATHHAGLAQVDRKAAEELFAEGHVRVLVSTATLAWGVNLPAHTVIIKGTQIYNPA 809 Query: 404 ------LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRL 451 LS LQ +GRAG + +G+ L++ + +E RL Sbjct: 810 KGQWTELSPQDVLQMLGRAGRPRYDDSGEGIIITTHGELNYYLSLMNQQLPIESQLMSRL 869 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 E+ N V + + L Y R+ Sbjct: 870 EDSL---NAEVVGGTVSSVGDGIQWLGYTYLYVRM 901 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 96/551 (17%), Positives = 173/551 (31%), Gaps = 88/551 (15%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F +Q Q + + V AP GSGKT+ A L AL RL+ E + Sbjct: 1294 FSFFNKIQSQLFRPLVEGDGSVFVGAPPGSGKTVLAEL-ALLRLWNEDAD---------- 1342 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 ++ +Y++P +A D +R E +G+ A R T Sbjct: 1343 AKTVYLAPTQA----------QVDARYDDWSQRMNEIHGGKTFSKLSGELAADLRKLAT- 1391 Query: 146 NPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL- 203 D+++ TP + + R +R V I D+VH V G + R+ + Sbjct: 1392 --SDVVLATPNQWDSLSRRWQKRAAVRAVSLFIADDVHLVGGDG---TYETVVSRMRYID 1446 Query: 204 -------LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMD 256 + +GL V D+A +L P I I Sbjct: 1447 VQLQESGAGRPLRIVGLGVPVADGVDMAGWLDATPYN--FKPWTASPTNIHI-------- 1496 Query: 257 DVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 S + + + + P + +H T++F +SR +T L+ + Sbjct: 1497 -----QSLSIPHHPSLMQAFLRPTYNAILELAPPKHSQTVIFVDSRRTLVDVTIGLSTI- 1550 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 A P + D+ + + T N ++ + + S+S R I + Sbjct: 1551 ADEQVLVPPVPEDSNLELAMAQVTDNTLKEAIQSGIGHLYPSMSSRDRKIVLALYAEQSI 1610 Query: 377 RCVVATSSLELGIDMGAVDLVI---------QVATPLSVASGLQRIGRAGHQVGGVSKGL 427 ++AT + +++ +++ LQ IG+A Sbjct: 1611 STIIATREECWTSPRSQLSVILGTQTYEGSEHRYVNYPISTVLQMIGQA----------- 1659 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPL-----DVLAQQTVAAAAMD------A 476 + LV + + + L + P + L D L + Sbjct: 1660 ----SNDALVLTPAAAKDYYLRFLNDSLPVESNLGASLHDALLAEICEKVIESMDDTVAW 1715 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARP 536 L Y R+ + +P R DA LS + K+V + G L Sbjct: 1716 LTYTYLYRRLHANPGFYGVPDRSDDALNVYLSELAETTVEQLVEAKMVEMDDEGGLEPLN 1775 Query: 537 GAQLLAVTSGG 547 A + + + Sbjct: 1776 AASIASYYNVS 1786 >UniRef50_C4JI59 Potential translation-regulating helicase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JI59_UNCRE Length = 1899 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 113/554 (20%), Positives = 208/554 (37%), Gaps = 66/554 (11%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR-------EGGE 75 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + R E + Sbjct: 272 FKGYKTLNRMQSLLYDVAYKTNENMLICAPTGAGKTDAAMLTILNTVARYTLPSPLEEPD 331 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 + + +I+Y++P+KAL +V L L + + V TGD Sbjct: 332 ASEFLVQTDEFKIVYVAPMKALAAEVTEKLGKRLAWL------------GIEVRELTGDM 379 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHL 193 + +K I++TTPE ++ E ++ V +IIDEVH + +RGA + Sbjct: 380 ---QLTKQEIVQTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVI 435 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + IGLSAT+ + DVA FL +R + A P V Sbjct: 436 ESLVARTQRQVESTQSLIRIIGLSATLPNYLDVADFLKVNRMAGLFYFDASFRP-----V 490 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ G+ ++ + D + + +VF +SR Sbjct: 491 PLEQ-----HFVGVKGDPGSKKSRENLDLVTFEKVRDMLEQGHQVMVFVHSRKDTVNTAR 545 Query: 311 RLNELYAARLQRSPSIAVDAAHF----ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + ++ A VD ++ + ++ +HH + + R + Sbjct: 546 LIAQMAADEQCSDLLSPVDHENYSQALRELKTSRGREIRDLVPKGLGTHHAGMPRSDRNL 605 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRA 416 E+ G ++ + T++L G+++ A +VI Q+ P L + LQ GRA Sbjct: 606 MERLFAEGVIKVLCCTATLAWGVNLPAAAVVIKGTQLYNPQEGKFIDLGILDVLQIFGRA 665 Query: 417 GHQVGGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + F T L + S +E F+ +L N L T Sbjct: 666 GRPQFQDTGIGFICTTHNKLQHYISAITSQEPIESRFSRKL---VDNLNAEISLGTVTSV 722 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP----SGDFSAFRPKLVWN 526 + L + R+RR + ++ R + +++N Sbjct: 723 TEGVQWLGYSYLFVRMRRNPHSYGIDWSEIRDDPHLVQRRRDLIIKAARVLQQSQMIIFN 782 Query: 527 RETGILTARPGAQL 540 T L ++ ++ Sbjct: 783 EGTEELRSKDVGRI 796 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 101/514 (19%), Positives = 194/514 (37%), Gaps = 67/514 (13%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P S L + P+ + + + F+ +Q Q +H + + L+ +PTGSGKT+AA L Sbjct: 1080 PLPISALKN---PSLEEIYGQRFQFFNPMQTQIFHTLYHTSANVLLGSPTGSGKTVAAEL 1136 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 ++ S+I+YI+P+KAL + ++ RRR Sbjct: 1137 AM-----------WWAFREKPGSKIVYIAPMKALVRERVQDW-----------RRRLAIP 1174 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + L++ TGD R T D++ITTPE + S + R +R V VIIDE+H Sbjct: 1175 LGLKLVELTGDNTPDTR---TIRNADMIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIH 1231 Query: 183 AVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G RG L + + R++ + + + +G+S +A+D+ +LG + + Sbjct: 1232 LL-GGDRGPILEIIVSRMNYIASQNKGSVRLLGMSTACANATDLGDWLGVKQGLYNFRHS 1290 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 P + + + + + IVF Sbjct: 1291 VRPVPLEIYIDGFPEQRGFCPLMQSMNRPTFLA-------------IKNHSPDKPVIVFV 1337 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST-SGATSNRVQSSDVFIARSHHGS 358 SR L + + ++ + + ++ + F HH Sbjct: 1338 ASRRQTRLTAKDLINFCGMEDDPRRFVHMSEDDLQANLARVKDDALREALSFGIGLHHAG 1397 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV----------IQVATPLSVAS 408 + + R ++E+ + +++ ++ATS+L G+++ A +V I+ + + Sbjct: 1398 LVESDRQLSEELFANNKIQILIATSTLAWGVNLPAHLVVVKGTQFFDAKIEAYRDMDLTD 1457 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ +GRAG Q F + + + + VE L++ Sbjct: 1458 VLQMLGRAGRPQFDSSGIARIFTQDAKKAFYKHFLHTGFPVESTLHKVLDD---HLGAEV 1514 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 T A+D L ++ R+ + + L Sbjct: 1515 SAGTITTKQDALDYLTWTFFFRRLHKNPSYYGLE 1548 >UniRef50_Q07GR1 ATP-dependent helicase, putative n=5 Tax=Alphaproteobacteria RepID=Q07GR1_ROSDO Length = 726 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 154/778 (19%), Positives = 274/778 (35%), Gaps = 130/778 (16%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALDRLF 70 D + + W + +++ +Q + S++ +V A T GKT AAF + ++ Sbjct: 6 DQLARPVQKWIRQQGWRELRDIQARAIRTICESDNDLIVAASTAGGKTEAAFFPLISQVL 65 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 E +LYI P+KAL TD L+ + E L V Sbjct: 66 DAPAEGGGFD-------VLYIGPLKALITDQAGRLEGICQ------------EAGLPVVP 106 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV---ETVIIDEVHAVAGS 187 GD +++ +NP IL+ TPESL + R E R V+IDE+H V S Sbjct: 107 WHGDVSQSVKTRAMKNPKGILLITPESLEALFVRRGLEVARLFGATRAVVIDELHTVLDS 166 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL---GGDRPVTVVNPPAMRHP 244 +RG L L RL+ + +RIGLSAT+ A+L ++ + Sbjct: 167 ERGVQLRSLLTRLELAIKRPIRRIGLSATLGDMDLARAYLRPDNAEKVTLIEAEGGEAEL 226 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 ++++ ++ +D ++ ++ +H L E LR +VF +R Sbjct: 227 KLQLRGYLSGGEDDNTPSATDAVAAH---------------LFEHLRGSDNLVFAGARQR 271 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 E RL L Q HH S+S++ R Sbjct: 272 VEIYADRLRNLCE---------------------------QEHLPQEFYPHHASLSRDHR 304 Query: 365 AITEQALK-SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG- 422 + E+ LK S + V TS+LELGID+G V V Q+ P +VA+ QR+GR+G + G Sbjct: 305 SFVERRLKDSSKPTTAVCTSTLELGIDIGDVTCVAQIGAPFTVAALRQRLGRSGRREGQP 364 Query: 423 ------------VSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 S F R R L+ S +++ + G E L L Q ++ Sbjct: 365 AILRQYAVETRLTSDSSFVDRLRLGLIRSIAMIDLLLEGWCEPPKSQALHLSTLVHQILS 424 Query: 471 AAAM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 A + YS + R P++ + +F L L +P + Sbjct: 425 VIAQRGGAPANILYSVLCREGPFRQVTVAMFTDVLRAL--GHPEIALIEQTEGGLLLLGQ 482 Query: 530 GILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDI 587 + Y+V E + + R +G L + + + Sbjct: 483 N--------------GERLVEHYSFYAVFKTPEEYRLVSNGRDLGTLPIDNI--LSPGMM 526 Query: 588 ITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAF 647 + W +Q+I + ++ P ++ P + G+ ++ + D + Sbjct: 527 LIFSGRRWLVQEIHDREKVIMVKPAKAGVPPVFGGDPGDIHDKVIARMFDVFDADTKPLY 586 Query: 648 FSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGR 707 AN ++EE R + + ++ +G+ I+ + G Sbjct: 587 MD-------------ANSLEMLEEARLNYAQMGFTDVSLV-----NLGEETSIIATRVGT 628 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQI 765 A+A+ +G DG + + + +++ + Sbjct: 629 IKTTTLALAL-----RGFGFSVEQY---DGFLQVEAGDETPPLPEVLKRIGEGEVVDL 678 >UniRef50_B8IW51 DEAD/DEAH box helicase domain protein n=2 Tax=Methylobacterium RepID=B8IW51_METNO Length = 783 Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 162/713 (22%), Positives = 251/713 (35%), Gaps = 109/713 (15%) Query: 2 ADNPDPSSLLPDVFSPATRDW-FLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 A + +S D + R W + + + VQ + ++ A T +GKT A Sbjct: 11 AGRAEEASRAFDRLAEPVRRWIWQQGWSTLRDVQERAVPAILAGGDVILAARTAAGKTEA 70 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL L R+ + R +LY+SP+KAL D R L+ L+ R Sbjct: 71 AFLPLLSRVL------PKRDGGRPGFSLLYVSPLKALINDQFRRLESLLEACDMPLHR-- 122 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVI 177 GD A + + P +++ TPESL L R RE ++ ++ Sbjct: 123 ----------WHGDVSADAKRRARERPQGVVLITPESLEATLVRRGREAPRLFGALDAIV 172 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHT-SAQRIGLSATVRSASDVAAFL--GGDRPVT 234 IDE+HA G++RG L L R++A R+GLSAT+ L G VT Sbjct: 173 IDELHAFIGTERGRQLQSVLSRIEACAGRDRIDRVGLSATLGDMDLAREALRPGASDAVT 232 Query: 235 VVNPPA--------MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE---- 282 +V +R + + P A D SG G + ++ Sbjct: 233 LVESQEGGTELLLQIRGYERPLRQPTAPPKDRLQQPSGPGPNEEREAASAVPDLCAVEAI 292 Query: 283 ----------TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH 332 L EVLR R ++F SR E T RL L A + A Sbjct: 293 QTASLVEEPVARHLFEVLRGRRNLLFAGSRQNVEIYTDRLRALSEAARLPNEFFA----- 347 Query: 333 FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK-SGELRCVVATSSLELGIDM 391 HHG++S+ +R E L+ VAT++LELGID+ Sbjct: 348 ----------------------HHGNLSRAERETVELRLREDARPTTAVATTTLELGIDI 385 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF-------------PRTRRDLVD 438 G V+ V Q+ SV+S QR+GR+G + G + + R R DLV Sbjct: 386 GDVESVAQIGPGWSVSSLRQRLGRSGRRPGKPAVLRIYVIEDEAGPTLHPADRLRLDLVQ 445 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPR 497 + +VE + E L L QT+A L+ + + P++++ R Sbjct: 446 AVAMVELLLERWCEPPRTRGLHLSTLVHQTLALIVQTGGLRPGTAWQLLCEHGPFRNVSR 505 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 +F L ++ P + P G +L ++V Sbjct: 506 DLFVEVLRSMA--RPEAELVEMSP--------------DGLLMLGPRGERLTAGHDFFAV 549 Query: 558 LLPEGEEK--AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 E + GSR +G + + I W I+ + +V P +A Sbjct: 550 FQSPEEYRIVEGSRPLGTVPLD--TTLAPGQTIIFAGRRWCIETVDERAKVVVVIPTNAA 607 Query: 616 RLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGL 668 P + G G G + + L F L + GL Sbjct: 608 LPPRFDGSGAGLHDRVAAAMRACLSGTHVPPFLDAGARTLLGQARDAFFAFGL 660 >UniRef50_B6JWX3 Antiviral helicase SLH1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWX3_SCHJY Length = 1949 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 127/596 (21%), Positives = 220/596 (36%), Gaps = 77/596 (12%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLA 60 A P + + R FL + +Q + +A + E+ LV APTG+GKT Sbjct: 247 ARLPGEKPVKISSLNTLCRKTFL-GYTSLNRIQSLIFPIAFTTNENMLVCAPTGAGKTDV 305 Query: 61 AFLYALDRLFR-------EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIA 113 A L L L + D ++ +I+Y++P+KAL +V + L + Sbjct: 306 AMLTILQTLSNYCDVVGVDSNGDDIYNLRKDEFKIVYVAPMKALAAEVVDKMGKRLAWL- 364 Query: 114 DERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLR 171 ++ TGD ++ + +L+TTPE ++ E Sbjct: 365 -----------GVKTREFTGDMQLTKKE---LSETQLLVTTPEKWDVVTRKSVGDTELAE 410 Query: 172 GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLG 228 V +IIDEVH + RGA + + R + TS + +GLSAT+ + DV+ FLG Sbjct: 411 KVRLLIIDEVHMLHDD-RGAVIESIVARTQRFVETSQTMIRIVGLSATLPNYLDVSDFLG 469 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDE 288 +R + P P+ G + G++ +L+ Sbjct: 470 VNRQRGLFYFSNAFRP-----CPIEQ-----HFIGVKGTANSRQSMGNLDEAAFDKVLNL 519 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS---------GA 339 + +VF +SR K +L E + + + D E+ + Sbjct: 520 LENGHQVMVFVHSRKDTIKTAKKLKEQFYNEGKMDLLDSSDELQSENPKYKLMQREVGKS 579 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI- 398 N ++ + H+ + + R +TE+ G ++ + T++L G+++ A +VI Sbjct: 580 KMNDLKELFKYGLGVHNAGMHRSDRHLTEKLFSMGLIKVLCCTATLAWGVNLPAYAVVIK 639 Query: 399 --QVATP-------LSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL------VDSAVIV 443 Q+ P L V LQ GRAG S + T L V + Sbjct: 640 GTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAEAYIVTTHDKLAHYLSVVTQQSPI 699 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 E F +E+L N L T A+ L Y R+R+ + Sbjct: 700 ESQF---VEHLVDNLNAEIALGSVTNIDEAVSWLGYTYLYIRMRKNPLIYGIAYDTLQDD 756 Query: 504 LDMLSGRYPSGDFSAFR----PKLVWNRETGILTARPGAQL-----LAVTSGGTIP 550 + S R +A + +V+N+ TG LT + ++ ++ S TI Sbjct: 757 PLLGSKRRELVMLAAQKLYANQMIVYNKNTGYLTPKDLGRIASHYYISYQSVTTIN 812 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 121/574 (21%), Positives = 211/574 (36%), Gaps = 77/574 (13%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P + L + P + + F AVQ Q +H + + + APTGSGKT+AA L Sbjct: 1118 PLPITALQN---PVLEEICAKRFSFFNAVQSQFFHTVYHTPTNVFIGAPTGSGKTMAAEL 1174 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + S+++YI+P+KAL + ++ L Sbjct: 1175 A-----------TWWAFREHPGSKVVYIAPMKALVKERLKDWGARL-----------VEP 1212 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVH 182 +++ + TGDT ++ + DI+ITTPE + R R+ ++ V VIIDE+H Sbjct: 1213 MHINMIELTGDTSPDSKTIMG---ADIIITTPEKWDGITRNWRTRKYVQNVSLVIIDEIH 1269 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + GS RG L + + R++ + ++S + +GLS V +A D+A +LG + Sbjct: 1270 LL-GSDRGPILEMIVSRMNYIASQTNSSVRILGLSTAVANAHDLADWLGITDGLFNFRHS 1328 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 P + G ++ R S+ I + I+F Sbjct: 1329 VRPVP-------------LEIYIDGFPGRAYGPRMMSMNKPAFQAI-KTHSPTKPVIIFV 1374 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST-SGATSNRVQSSDVFIARSHHGS 358 +SR L A + + E + ++ S F HH Sbjct: 1375 SSRRQTRYTARDLISFCALEDNPRRFLNMKEEDLEMVLTKVEDKNLKMSLPFGIGLHHAG 1434 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV----------IQVATPLSVAS 408 ++++ R I+E+ + +++ ++ATS++ G++ A ++ I+ + Sbjct: 1435 LTEDDRRISEELFVNNKIQILIATSTIAWGVNTPAHLVIVKGTEYYDAKIEGYKDMDQTD 1494 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ +GRAG Q F + + + S VE LE+ N Sbjct: 1495 VLQMLGRAGRPQFDTEGVARIFVQDTKKSFYKHFLHSGFPVESYLHKVLED---HINAEI 1551 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 AMD L +Y RV + + ++ + LS + F Sbjct: 1552 ASGTLHSRQDAMDFLTWTYFYRRVYQNPVYYGAASNDQESVDEFLSQLI-NNTFKELELS 1610 Query: 523 LVWNRETGILTARPGAQLLAVTSGGTIPDRGMYS 556 R + A TS G I S Sbjct: 1611 ACIYRTDN--------ENYAPTSLGRIVSYYYIS 1636 >UniRef50_Q16RG8 ATP-dependent DNA helicase mer3 n=3 Tax=Culicini RepID=Q16RG8_AEDAE Length = 1199 Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats. Identities = 117/515 (22%), Positives = 201/515 (39%), Gaps = 69/515 (13%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 D +P R F F+Q +Q + + +V APTGSGKT L + L + Sbjct: 34 DEIAPVFRHVFHE-FQQFNEIQSLVMDDMLYTDKSLVVSAPTGSGKTAIFELAMVRLLMK 92 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 ++ R++YI+PIKAL + + + + + ++ Sbjct: 93 -----LEDSRYEGDYRMIYIAPIKALCAEKFADWKGKFE------------PLGVKTAEV 135 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSK 188 TGDT ++ L ++++TTPE + T R R+ +R + V+IDEVH + Sbjct: 136 TGDTEMKDFWDLP--DCNLILTTPEKWNSI-TRRWRQNVNFVRMIRLVMIDEVHILNDQF 192 Query: 189 RGAHLALSLERLDALLH------------TSAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 RG L + R+ ++ + I LSAT + +D+AA++G Sbjct: 193 RGPVLEAVVSRMRSIHRFVEGDGGESAVVDPMRIIALSATAPNVADLAAWVGEANTTCFY 252 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 N R P D + + R Y ++ + R ++ Sbjct: 253 NISESRRP---------IKIDKHVLGYYCDPSTSPFRFDMNLNYKLFEVICKYSSGRPSL 303 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 VF ++R E + L E ++ RL A+ + +G R+ + HH Sbjct: 304 VFCSTRKATESASKHLVEQHSLRLTPDQVSALQIVANQLQNGDLKRRLLA----GVGYHH 359 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV--------AS 408 +S R + E A ++G + + TS L +G+++ A ++I+ + +S Sbjct: 360 AGLSIADRQLIEDAFRAGRIPVLCCTSGLAMGVNLPAHLVIIKSTQMYTDYGMEEYPESS 419 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRL-------ENLTPPHNPL 461 Q IGRAG + G+ T+R+ V E + G + E+L N Sbjct: 420 IFQMIGRAGR-PQFDTFGVAVIMTQRENVQKY---ERLATGSVPIESYLHEHLAEHLNSE 475 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 VL T A+AMD ++ Y R A LP Sbjct: 476 IVLQTITDLASAMDWIRSTFLYVRALAAPARYGLP 510 >UniRef50_Q675T1 Putative helicase n=1 Tax=Oikopleura dioica RepID=Q675T1_OIKDI Length = 2017 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 112/503 (22%), Positives = 188/503 (37%), Gaps = 56/503 (11%) Query: 26 AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 + +Q + A+ + E+ LV APTG+GKT A L L+ + + E K + Sbjct: 321 GMESLNNLQSIVFDAASNTNENLLVAAPTGAGKTNVAMLCVLNVIRQHINEVG--TLKLR 378 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +I+Y++P+KAL +V Q L+ + ++V TGD ++ Sbjct: 379 DFKIVYVAPMKALAAEVTEKFQSKLR------------CLGIKVREYTGDMNLTKKE--- 423 Query: 145 RNPPDILITTPESLYLMLTSRAR--ETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 +L+TTPE ++ R + E + ++ +I+DE+H + S RGA L + R Sbjct: 424 IEETQMLVTTPEKWDVLTRKRIQDVELMSKIKLMILDEIHLLQDS-RGAVLEALVARTLR 482 Query: 203 LLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 L++TS + +GLSAT+ + DVA FL + + P VP+ + Sbjct: 483 LVNTSQQMIRIVGLSATLPNYVDVAKFLRVNLDKGLFFFDGRFRP-----VPLD-----T 532 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 + + L + + ++F +SRG K L E + Sbjct: 533 RYIGVKARGGRFAQLNVMNQQAYKIALQHIRNGKQVMIFVHSRGATAKTCESLMEQASQE 592 Query: 320 LQRSPSIAVDAAH-----FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 R H A S V + HH + + R++TE+ + G Sbjct: 593 GTRREFEPDPDHHRYHELSRRVKNAKSREVSKFFQYGFGCHHAGMIRSDRSLTEKLFEQG 652 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQV--------ATPLSVASGLQRIGRAGH-QVGGVSK 425 +R + TS+L G+++ A +VI+ LSV Q GRAG Q + Sbjct: 653 LIRVLCCTSTLAWGVNLPAYAVVIKGTEIYVNGQYIDLSVLDVQQIFGRAGRPQFDNSGE 712 Query: 426 GLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 + L+ A +E F L LT N A+ L Sbjct: 713 ATIITTHDKLVHYVSLMIRAAPIESQF---LSKLTDNLNAEIASGSVANIDDAVRWLSYT 769 Query: 481 EWYSRVRRAAPWKDLPRRVFDAT 503 R+ + L R Sbjct: 770 YLDIRITKNPFHYGLNREQISDL 792 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 118/553 (21%), Positives = 203/553 (36%), Gaps = 84/553 (15%) Query: 24 LRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 L +F +Q Q +H + +ALV APTGSGKT A L L ++FR+ Sbjct: 1173 LYSFSHFNPIQTQVFHCLYHHDSNALVGAPTGSGKTACAELSML-KVFRDY--------- 1222 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 + +YI+P+KAL + D+ ++ ++ ++ TGD +++ Sbjct: 1223 -PNGKCVYIAPLKALVKERM-----------DDWSKKLGGKLGKKLVEMTGDIAPDQKAI 1270 Query: 143 LTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLER-- 199 + DI+ITTPE + S + R+ +R V ++IDE+H + G RG L + R Sbjct: 1271 V---SADIIITTPEKWDGISRSWQTRKYVRDVRLIVIDEIHML-GEDRGPVLESIVTRTN 1326 Query: 200 -LDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 + A + + +GLS + +A D+A +LG P++R +RI V Sbjct: 1327 FISAQTKANLRIVGLSTALANARDLADWLGIKNFGLYNFKPSVRPVPMRIHV-------- 1378 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 G + R + I E + I+F +SR L L A Sbjct: 1379 ----QGFPGKHYCPRMALMNKPAYQAI-QEHSPTKPVIIFVSSRRQTRLTALSLISLLAG 1433 Query: 319 RLQRSPSIAVDAAHFESTSGATSN----RVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 I + H ++ + F HH + + R I E + Sbjct: 1434 NENPKAWINYELIHELELDALIDRVKDVNLRHTLEFGIGMHHAGLVESDRRIVENLFRDR 1493 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLS----------VASGLQRIGRAGHQVGGVS 424 +++ ++AT++L G+++ A ++++ + LQ +GRAG Sbjct: 1494 KIQLLIATATLAWGVNLPAHMVIVKGTEHFDGKQGKFVDVGITDVLQMVGRAGR------ 1547 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGR----LENLTPPHNPLDVLAQQTVAAA-------- 472 P+ + V I + E N L VL A Sbjct: 1548 -----PQYDNEAVACVFIHDIKKNYYKKFIYEPFPVESNLLGVLPDHLNAEIVAGTVKSK 1602 Query: 473 --AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV-WNRET 529 AM+ L ++ R+ + L +A + LS R +V + E Sbjct: 1603 QDAMNYLTWTYFFRRLLMNPNYYQLDTLEGEAINEFLSELVEKTIGELERSGVVEVDEED 1662 Query: 530 GILTARPGAQLLA 542 L LA Sbjct: 1663 NNLLFASSLGRLA 1675 >UniRef50_B7FQ60 Predicted protein (Fragment) n=2 Tax=Bacillariophyta RepID=B7FQ60_PHATR Length = 1589 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 133/559 (23%), Positives = 216/559 (38%), Gaps = 77/559 (13%) Query: 29 QPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGG--EDTREAHKRKT 85 +Q + VA ++ LV APTG+GKT A L + FR+ G R Sbjct: 51 SLNPMQSSVFEVAYLHRDNLLVCAPTGAGKTNVAMLSVVAH-FRDVGLIASDRTTVLETG 109 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 +++YI+P+KAL +V LKG+ L V TGD + ++L Sbjct: 110 RKVIYIAPMKALAQEVVEKFSAKLKGLR------------LTVRELTGDM---QLTRLQA 154 Query: 146 NPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 +++TTPE ++ + +IIDEVH +A +RGA + + RL Sbjct: 155 EAAHVIVTTPEKWDVVTRKSGTDENALGNQCGLLIIDEVHLLAD-ERGAVIESVVSRLHR 213 Query: 203 LLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 L+ + A+ +GLSAT+ + DVA+FL P R PV Sbjct: 214 LVESRQKQARIVGLSATLPNYQDVASFLKVPERGLFFFGPEHR--------PVPLQQQFI 265 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL---- 315 V++GT +E + +LD + R +VF +SR L E+ Sbjct: 266 GVSAGT--KDRFAKEKRMNEICFDVVLDSLQRGYQVMVFVHSRKGTGDTAKSLAEMASHE 323 Query: 316 ------YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 + + S + H E + + V HH + + R +TEQ Sbjct: 324 GVLERYFVTAGKEGSSGDAYSRHAEKVKKSRNREVGMHFANGMGIHHAGMLRGDRKLTEQ 383 Query: 370 ALKSGELRCVVATSSLEL----GIDMGAVDLVIQ---VATP-------LSVASGLQRIGR 415 G ++ +V T++L G + A +VI+ V P LS+ Q GR Sbjct: 384 VFSDGAIKVLVCTATLAWQVFRGFRLPAHTVVIKGTEVYNPEKGGVVDLSILDVQQIFGR 443 Query: 416 AGH---QVGGVSKGL----FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 AG G + + FPR LV AV +E F +++L N V T Sbjct: 444 AGRPQFDTSGEATMITSIDAFPRYMDKLV-RAVPIESNF---IKHLADHLNAEVVGGTVT 499 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR-----YPSGDFSAFRPKL 523 A+ L Y+R+RR + ++ ML GR + + Sbjct: 500 NIQEAVTWLTYTYLYTRMRRNPIGYGIKEDEKNS-DPMLKGRCNELVREAAKLLDLNRMI 558 Query: 524 VWNRETGILTARPGAQLLA 542 +++++G L+ ++ A Sbjct: 559 RYDQQSGNLSVADRGRVAA 577 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 114/553 (20%), Positives = 198/553 (35%), Gaps = 90/553 (16%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAF 62 +P P + L + R FK ++Q Q +HV ++ L+ APTGSGKT+ A Sbjct: 920 SPVPVTSLAECKYEQL----YRNFKCFNSIQSQLFHVLYHTDSPVLLGAPTGSGKTIVAE 975 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L R +YI+P+K+L + + +I L G Sbjct: 976 LALL-----------RMKRIFPKGICVYIAPLKSLARERLKEWKIRL----------GSA 1014 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT------------SRARETL 170 + ++ +GDT + D+L+ TPE L+ + + + Sbjct: 1015 PLRWKILELSGDTHHDQ---GVVESADVLVCTPEKWDLISRGWRSYVKAEASENAGKAFV 1071 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALL---------------HTSAQRIGLSA 215 + V+ +++DEVH + G +RGA L + R + + IGLS Sbjct: 1072 KRVKLLVLDEVHLL-GEERGAVLEAIVSRTRFISQFVEEQNNAKTSKPKEDVTRIIGLST 1130 Query: 216 TVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREG 275 + + D+A ++G D T R + ++ G + R Sbjct: 1131 ALANPLDLADWIGIDTRNT----GPTRMRGLYNFSSSVRPVPLTVHVQGYPGRHYCPRMA 1186 Query: 276 SIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES 335 ++ I E + ++F SR + AA + + ++ Sbjct: 1187 TMNKPCFAAI-KEYSPAKPVLIFVASRRQTRLTAFDIISYAAAEANPKRFLKCNEEVVDA 1245 Query: 336 TSGATSNR-VQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAV 394 S+ ++ + F HH +S R + E SG+++ +VATS+L G++ A Sbjct: 1246 IINTVSDEALRHTLAFGIGLHHAGISSHDRDVVETMYLSGKIQVLVATSTLAWGVNTPAH 1305 Query: 395 DLVIQ------------VATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD------- 435 ++++ V PL+ LQ IGRAG G +G + D Sbjct: 1306 LVIVKGTEYFDGKSSRYVDYPLT--DVLQMIGRAGR-PGFDDRGSAVVMSTEDKKPFYKK 1362 Query: 436 LVDSAVIVECMFAGRL-ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 + S VE GR+ ENL N A+ L + RVR + Sbjct: 1363 FLYSPFPVESCLTGRIHENL----NAEIASGTIGSVLEAVGYLTWTFYARRVRANPSFYG 1418 Query: 495 LPRRVFDATLDML 507 + +L Sbjct: 1419 AQSSSEEDVEHLL 1431 >UniRef50_P50830 Uncharacterized ATP-dependent helicase yprA n=32 Tax=Bacteria RepID=YPRA_BACSU Length = 749 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 117/613 (19%), Positives = 216/613 (35%), Gaps = 106/613 (17%) Query: 11 LPDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 +P+ + R + Q + + E + + PT SGKTL L L + Sbjct: 35 MPESIDERIKAALSKRGIDELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSI 94 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 ++ +T+R LY+ P KAL D + L + + ++++ Sbjct: 95 AQD-----------ETNRALYLFPTKALAQDQKSELNEIIDEMG----------IDIKSF 133 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAG 186 GDT R K+ R I+IT P+ L+ + + ++ ++IDE+H G Sbjct: 134 TYDGDTSPAIRQKV-RKAGHIVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRG 192 Query: 187 SKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 G+H+A + RL + + I SAT+ + ++ L G +P+ +V+ Sbjct: 193 V-FGSHVANVIRRLKRICRFYGSDPVFICTSATIANPKELGEQLTG-KPMRLVDDNGAPS 250 Query: 244 PQIRIVV--PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 + V P ++ S T E + +E TIVF S Sbjct: 251 GRKHFVFYNPPIVNKPLNIRRSATAEVNELAKEFLKNKV-------------QTIVFARS 297 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R E + + + EL + R + G Sbjct: 298 RVRVEIILSHIQELVKKEIGTKS---------------------------IRGYRGGYLP 330 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 ++R E+ L+ G++ VV+T++LELG+D+G + + + P SVAS Q+ GRAG + G Sbjct: 331 KERREIERGLREGDILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHG 390 Query: 422 GVSKGLFFPRTRRDLVDSAVI--VECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 L +D ++ E F E+ L +L AA + Sbjct: 391 ES---LIIMVANSTPIDQYIVRHPEYFFNRSPESARINPENLIILVDHLKCAAYELPFRA 447 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 DE + + L+ L + ++ R +Q Sbjct: 448 DEEFGAM------------EVSDILEYLQEEAVLHRNGERYHWASESFPASNISLRSASQ 495 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITL-GATSWRIQ 598 +V++ + + A R +GE+D ++ I L ++++ Sbjct: 496 E---------------NVVIVDQSDIANVRIIGEMDRFSAMTLLHDEAIYLHEGVQYQVE 540 Query: 599 QITRDQVIVTPAP 611 ++ D Sbjct: 541 KLDWDHKKAYVRK 553 >UniRef50_B2WF75 Activating signal cointegrator 1 complex subunit 3 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WF75_PYRTR Length = 1810 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 109/551 (19%), Positives = 209/551 (37%), Gaps = 60/551 (10%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR-------EGGE 75 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + + + + Sbjct: 274 FKGYKSLNRMQSLVYPVAYKTSENMLICAPTGAGKTDAAMLTILNTVAKNVVPNPIDEPD 333 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 T + +++Y++P+KAL +V L L + ++ TGD Sbjct: 334 ATDFTVMAEDFKVIYVAPMKALAAEVTEKLGKRLAWL------------GIKARELTGDM 381 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHL 193 + L I++TTPE ++ E ++ V +IIDEVH + +RGA L Sbjct: 382 HLTKAEIL---DTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVL 437 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + +GLSAT+ + DVA FL ++ + A P V Sbjct: 438 ESLVARTQRQVESTQSLIRIVGLSATLPNYVDVADFLRVNKMAGLFYFDASFRP-----V 492 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ G+ A ++ +++ + +VF +SR K Sbjct: 493 PLEQ-----HFIGAKGKPGTAKSRENVEKVAFDKVVEMLKLGHQIMVFVHSRKDTVKTAR 547 Query: 311 RLNELYAARLQRSPSIAVDAAHFEST----SGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 RL E+ D +E+ + ++ +HH + + R + Sbjct: 548 RLYEMAMEEQCTDLFDPQDHPRYENAVRDMKQSKGRELRELLGKGMGTHHAGMPRSDRNM 607 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRA 416 E+ G L+ + T++L G+++ A ++I+ T L + LQ GRA Sbjct: 608 IERLFAEGVLKVLCCTATLAWGVNLPAAAVLIKGTQVYNAQEGKFTDLGILDVLQIFGRA 667 Query: 417 GHQVGGVSKGLFFPRTRRDL---VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 G S F T L + + + + + L N L T + A Sbjct: 668 GRPQFQDSGIGFICTTHDRLDHYMRAVTEQQPIESRFSSKLIDNLNAEISLGTVTTVSEA 727 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFRPKLVWNRET 529 + L + R++++ + ++ R + +++N T Sbjct: 728 VTWLGYSYLFVRMQKSPLMYGIEWAEIRDDPQLVGRRRKLIIDAARILQRSQMIIFNETT 787 Query: 530 GILTARPGAQL 540 L A+ ++ Sbjct: 788 EDLRAKDVGRI 798 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 102/533 (19%), Positives = 192/533 (36%), Gaps = 88/533 (16%) Query: 4 NPDPSSLLPDVFS-----------PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIA 51 PD S+ D+ + P + + + F+ +Q Q +H + + L+ + Sbjct: 918 RPDTESIYTDLLNLQPLPIAALKNPLLEEVYAQRFQYFNPMQSQIFHCLYHTPANVLLGS 977 Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 PTGSGKT+AA L ++ S+++YI+P+KAL + ++ L G Sbjct: 978 PTGSGKTVAAELAM-----------WWAFREKPGSKVVYIAPMKALVRERVQDWGKRLAG 1026 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETL 170 + L++ TGD R T DI+ITTPE + S + R + Sbjct: 1027 -----------PMGLKLVELTGDNTPDTR---TIRDADIIITTPEKWDGISRSWQTRGYV 1072 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS----AQRIGLSATVRSASDVAAF 226 R V VIIDE+H + G RG L + + R++ + + +G+S +A+D+ + Sbjct: 1073 RQVSLVIIDEIHLL-GGDRGPILEIIVSRMNYIASQKKDGSIRLLGMSTACANAADLGNW 1131 Query: 227 LGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286 LG + P + + + + Sbjct: 1132 LGVKEGLFNFRHSVRPVPLEIFIDGFPEQRGFCPLMQSMNRPTFLA-------------I 1178 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQ 345 + IVF SR L + + + + ++ Sbjct: 1179 KAHSPEKPVIVFVASRRQTRLTARDLINFCGMEDNPRRFLRMSEDDLAVNLDRVKDDSLR 1238 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ------ 399 + F HH + + R+++E+ + +++ +VATS+L G+++ A +V++ Sbjct: 1239 EALSFGIGLHHAGLVETDRSLSEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFD 1298 Query: 400 ----VATPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENL 454 + + LQ +GRAG Q F + + + + L Sbjct: 1299 AKTEGYKDMDLTDVLQMLGRAGRPQFDDSGIARIFTQDAK---------KEFYKHFLHTG 1349 Query: 455 TPPHNPLD-VLAQQTVAAA----------AMDALQVDEWYSRVRRAAPWKDLP 496 P + L VL A A+D L ++ R+ + + L Sbjct: 1350 FPVESSLHKVLDNHLGAEISAGTIATKQDALDYLTWTFFFRRLHKNPSFYGLE 1402 >UniRef50_Q47TW5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=1 Tax=Thermobifida fusca YX RepID=Q47TW5_THEFY Length = 736 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 170/739 (23%), Positives = 261/739 (35%), Gaps = 132/739 (17%) Query: 12 PDVFSPATRD---W-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYAL 66 PD FS RD W + + + +Q Q L+ A T GKT A FL Sbjct: 15 PDAFSLLHRDVQRWVWEQRWTSLRPIQEQAIQPIISGNVDVLLAAATAGGKTEAVFLPVC 74 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 L R+ + + +SP+KAL D L I + Sbjct: 75 SVLARDADHGEAT-----GIQAVCLSPLKALINDQHARLTALCARIK------------V 117 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR---ETLRGVETVIIDEVHA 183 V GD ++ +L +P IL+ TPESL M R + R + +++DE+H+ Sbjct: 118 PVTAWHGDIGVTQKDRLRGDPAGILLITPESLEAMFVRRGSTVSQLFRDLRYIVVDELHS 177 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG---GDRPVTVVNPPA 240 G+ RGA L + RL+ RIG+SAT+ A FL G++ V V + Sbjct: 178 FLGTARGAQLRSLMNRLEHAAGRRVSRIGMSATLADLRAAAEFLRPGHGEQVVVVEDQHG 237 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 + +++ VA+M + +H L +V+R +VF N Sbjct: 238 GKELLLQLRGYVADMRSDPGTSMSPDALAH---------------LYQVVRTGHNMVFVN 282 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SRG E + L+ L +P HHGS+S Sbjct: 283 SRGAVESCVSALSALARQERLPNPFF---------------------------PHHGSLS 315 Query: 361 KEQRAITEQALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 E RA EQ LK+ VV TS+LELGID+G VD V+Q+ P SVA QR+GR+G Sbjct: 316 AELRAHAEQRLKNRSAPATVVCTSTLELGIDVGWVDTVVQLGVPPSVAGLRQRLGRSGRG 375 Query: 420 VGGVSKGLFFP----------RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 L+ R R DLV + +VE + + E L L QQ + Sbjct: 376 GAAAKLYLYITEQAHPDMPVDRLRLDLVQTVAMVELLLSRWYEPPNLDTPHLSTLVQQIL 435 Query: 470 AAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 + A Y + + + F + L L Sbjct: 436 SVLAQHGGAHALRLYRELCATGAFPGVDEHTFASLLRSLGEHQL---------------- 479 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM-----VYESR 583 I R G L + YS E + +D +M Sbjct: 480 --ISQERSGLLLPGKIGEALLNHYAFYSAFDVAEEYA-----IATVDGDMGTMPLSPSVD 532 Query: 584 VNDIITLGATSWRIQQI--TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL 641 ++ +W++ ++ +++VTPA G SA P + G + + + + Sbjct: 533 AGALLAFAGRTWQVVEVKPDERRILVTPARG-SAVPPGFMGSAAPVHDRIRQRMREV--- 588 Query: 642 LADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIIL 701 + +P +L E I L++E R+A + + V E D +L Sbjct: 589 -----YLDTEVPRYLDEAAAI-----LLDEGRSAFRAMGLADTDVYEYNGD------TLL 632 Query: 702 HSPYGRRVHEPWAVAIAGR 720 G R E Sbjct: 633 FPWRGDRTAETLRHLFQWA 651 >UniRef50_Q5KBS7 RNA helicase, putative n=2 Tax=Agaricomycotina RepID=Q5KBS7_CRYNE Length = 1770 Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats. Identities = 112/506 (22%), Positives = 195/506 (38%), Gaps = 59/506 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFRE- 72 SP R F + Q +Q A + E+ L+ APTG+GKT A + + L + Sbjct: 307 LSPIARGCF-PKYIQLNRMQSIVQPTAMNTNENMLICAPTGAGKTDVAIMSIIRVLSQHV 365 Query: 73 ----GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + R +++Y++P+KAL ++ L + +++V Sbjct: 366 IDGPTSHPSGFNINRNAFKVIYVAPMKALAAEIVSKFAKRLAWL------------SIKV 413 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAG 186 TGD + +K I++TTPE ++ E V+ +IIDEVH +A Sbjct: 414 RELTGDM---QLTKQEIEETQIIVTTPEKWDVVTRKPTGEGELASKVKLLIIDEVHLLAE 470 Query: 187 SKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 RGA + + R + +S + +GLSAT+ + DV FL +R + A Sbjct: 471 D-RGAVIETIVARTLRQVESSQSLIRIVGLSATLPNYVDVGDFLRVNRYQGLFYFDASFR 529 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 P VP+ +G+ A ++ + + + V +VF ++R Sbjct: 530 P-----VPLEQ-----HFIGVSGKPRSAVSARNMDRVVFEKVSELVEAGHQVMVFVHARR 579 Query: 304 LAEKLTARLNELYAARLQ----RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 K L E+ ++ A + + S + + ++ HH + Sbjct: 580 DTVKTAQTLKEMALEEGVSTFFQTDGHAKFSQYRAELSKSKNKEMKELFDAGFGIHHAGM 639 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASG 409 + R + E+ + G + + TS+L G+++ A ++I+ LSV Sbjct: 640 LRTDRNMMEKMFEDGCINVLCCTSTLAWGVNLPAHAVIIKGTQVYDTGKGSFMDLSVLDV 699 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPH-----NPLDVL 464 LQ GRAG G + G+ F T D VD V M +E+ P N L Sbjct: 700 LQIFGRAGR-PGYATSGVGFICTTHDKVDHYVT-SVMSQTPIESKFIPGMTDALNAEVAL 757 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAA 490 T AM L + R+++ Sbjct: 758 GTITNVQEAMQWLSYTYLFVRMKKNP 783 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 90/616 (14%), Positives = 196/616 (31%), Gaps = 84/616 (13%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGG 74 P + + +Q + + + +A+V +P GSGKTL A A+ FR Sbjct: 1168 DPQLEQRYAQTLDTLNTIQSHAFWMLYNTSMNAVVSSPVGSGKTLLAE-GAIWNAFRHNK 1226 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 E +L + P + L+ + +RR + Sbjct: 1227 ESV----------VLIMVPER----YAVHETVARLRNLCPPKRRVIIRPL---------- 1262 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG--VETVIIDEVHAVAGSKRGAH 192 + +L P I +TTP ++ + L + + +++H + Sbjct: 1263 FNVSDFDQLLSGGPAIGVTTP--FAVLSNEKIDNFLSTQRLGLYVFEDLHLLDE-----V 1315 Query: 193 LALSLERLDALLHT-SAQRIGLSATVRSASDVAAFLGGDRPVTVV--NPPAMRHPQIRIV 249 L++ ++ T + +G ++++ SD+A +LG D P A + P + Sbjct: 1316 YELAVSKILTFARTARTRIVGTTSSLSDPSDLAEWLGVDPGPLDQWGKPVASQPPALFSF 1375 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 P + +S S+ IL V I+F S + Sbjct: 1376 APSDRGNHISVSIKSFTIPHGPTLLRSMIKPTYD-ILKSVTGG--AIIFVPSVQACATVA 1432 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSN-RVQSSDVFIARSHHGSVSKEQRAITE 368 A L + ++ E + + ++ + ++ AI Sbjct: 1433 ADLVTQSGTEMNVDGFLSRPRDEVEPFAERLKDEKLFEPVLHGIGYITRDMAPTDIAIVL 1492 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRA-GHQVGGVSKGL 427 + SG +R ++A + + ++I ++ R G + Sbjct: 1493 ELFASGIIRAIIAPRQSCWTLPVRGESVIIMGT------QYVRMEARPEGKGPKAKPEKH 1546 Query: 428 FFPRTRRDLV--DSAVIVECMFAGRLENLTPPHNPLDVLA----QQTVAAAAMDALQVD- 480 + ++LV +V T P + ++ Q ++ + L ++ Sbjct: 1547 LVSYSAKELVKMQGFAVVSAA-------PTAPGGRMFIMCQAEQQVMISRVLKEGLPLES 1599 Query: 481 EWYSRV-RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 + + RR+ P + R A + GR P + RP+ R+ ++ Sbjct: 1600 KILDLLSRRSTPSSSIDPRAIQALNNFFKGRRPPPRPTVDRPRRPDGRKADMMD----IV 1655 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 + S + Y ++ +G E G RV +D ++ +++ Sbjct: 1656 NWSFLSVRVKSNPSYYQLV--KGSEAEGISRV--IDGWF--DAMDGI---------KVET 1700 Query: 600 ITRDQVI-VTPAPGRS 614 + + + V A + Sbjct: 1701 VEEQRRLTVEDAEAQE 1716 >UniRef50_Q9FNQ1 RNA helicase n=14 Tax=Viridiplantae RepID=Q9FNQ1_ARATH Length = 2157 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 104/508 (20%), Positives = 190/508 (37%), Gaps = 58/508 (11%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 +K +Q + + + E+ LV APTG+GKT A + L + + + Sbjct: 498 AQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHFRDGYL 557 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 + +I+Y++P+KAL +V L +N+ V TGD Sbjct: 558 H---KNEFKIVYVAPMKALAAEVTSAFSRRLA------------PLNMVVKELTGDM--- 599 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSRARETLR-GVETVIIDEVHAVAGSKRGAHLALSL 197 + +K +++TTPE ++ + ++ V+ +IIDEVH + RGA + + Sbjct: 600 QLTKTELEETQMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLNDD-RGAVIEALV 658 Query: 198 ERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 R + ++ + +GLSAT+ S VA FL + + + P VP+A Sbjct: 659 ARTLRQVESTQTMIRIVGLSATLPSYLQVAQFLRVNTDTGLFYFDSSYRP-----VPLAQ 713 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 G E + A R + ++D + + ++F +SR K +L + Sbjct: 714 Q------YIGITEHNFAARNELLNEICYKKVVDSIKQGHQAMIFVHSRKDTSKTAEKLVD 767 Query: 315 LYAARLQRSPSIAVDAAHF----ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L F + + + + HH + + R +TE+ Sbjct: 768 LARQYETLDLFTNETHPQFQLMKKDVMKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTERL 827 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGH-Q 419 G L+ +V T++L G+++ A +VI+ L + +Q GRAG Q Sbjct: 828 FSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQ 887 Query: 420 VGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 +G+ + L+ S + +E F + +L N VL T A Sbjct: 888 FDKSGEGIIITSHDKLAYYLRLLTSQLPIESQF---ISSLKDNLNAEVVLGTVTNVKEAC 944 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDA 502 L R++ + A Sbjct: 945 AWLGYTYLSIRMKLNPLAYGIGWEEIIA 972 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 112/530 (21%), Positives = 199/530 (37%), Gaps = 73/530 (13%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAF 62 P P + L + + L F +Q Q +HV +++ LV APTGSGKT++A Sbjct: 1335 KPLPVTSLGNKLYES-----LYKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAE 1389 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L RLF + +++YI+P+KA+ + + + L Sbjct: 1390 LAML-RLFST----------QPDMKVVYIAPLKAIVRERMNDWKKHLVA----------- 1427 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEV 181 + + TGD + L DI+I+TPE + R ++ V VI+DE+ Sbjct: 1428 PLGKEMVEMTGDYTPDLVALL---SADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEI 1484 Query: 182 HAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 H + G+ RG L + + R+ + S + +GLS + +A D+A +LG Sbjct: 1485 HLL-GADRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFK 1543 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 P++R I + + G + R S+ I + ++F Sbjct: 1544 PSVRPVPIEVHI------------QGYPGKYYCPRMNSMNKPAYAAIC-THSPTKPVLIF 1590 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST-SGATSNRVQSSDVFIARSHHG 357 +SR L + A+ ++V + S T ++ + F HH Sbjct: 1591 VSSRRQTRLTALDLIQFAASDEHPRQFLSVSEEDLQMVLSQITDQNLRHTLQFGIGLHHA 1650 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ------------VATPLS 405 ++ R+ E+ + +++ +V+TS+L G+++ A ++I+ V PL+ Sbjct: 1651 GLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLT 1710 Query: 406 VASGLQRIGRAGH-QVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTPPHN 459 LQ +GRAG Q K + + + VE E L N Sbjct: 1711 --EILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLK---EKLHDHFN 1765 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG 509 V A+ L + R+ + L + LS Sbjct: 1766 AEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETICSYLSR 1815 >UniRef50_A4QWU8 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4QWU8_MAGGR Length = 1508 Score = 310 bits (793), Expect = 3e-82, Method: Composition-based stats. Identities = 110/488 (22%), Positives = 207/488 (42%), Gaps = 69/488 (14%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P +LPD + F+ AVQ +++ ++ ++ +V APTGSGKT L A Sbjct: 237 PRDVLPDRLR------VVFPFELFNAVQSKSFASVYKTNDNVVVSAPTGSGKTAIFEL-A 289 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + +L + + +++Y++P KAL ++ R+ + + + N Sbjct: 290 ICKLLSQNTDQ--------NFKVIYVAPTKALCSERARDWESKFRHL------------N 329 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR--ARETLRGVETVIIDEVHA 183 L TGDT + + S++ I++TTPE L + R+ L V+ V+IDEVH Sbjct: 330 LTSAELTGDTFSTDMSRVR--AAQIIVTTPEKLDSITRRWEDYRKLLDLVQLVLIDEVHF 387 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 + + RGA L + + R+ + ++ + + LSATV ++ DVA +LG R T + PA Sbjct: 388 LKDT-RGATLEVLICRMKTQV-SNIRVVALSATVPNSEDVAKWLG--RGNTDNHQPARLE 443 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH---RSTIVFTN 300 PV V + +G P ++T + + + H + IVF Sbjct: 444 TFGEEFRPVRLQKHVYGLHC-------SGNAFQFEPQLDTKLCEVITTHSQKKPIIVFCF 496 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R E +L++L+ + + + T+ +Q F HH + Sbjct: 497 TRKSCELTAKKLSQLWISMADDKKPWPGPGQNMKVTNDGLQQVMQQGVAF----HHAGLE 552 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQR 412 ++ R E+A G+L + TS+L +G+++ ++++ S +Q Sbjct: 553 QQDRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVILKGTMGFQDGKLLEYSDLEVVQM 612 Query: 413 IGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAG-RLENLTPPHNPLDVLAQQTVA 470 +GRAG Q + + R+ ++ E M +G ++ T HN L + Sbjct: 613 LGRAGRPQFDNSAVAIILTRS-----ETKARYEAMASGTQVLESTLHHN----LIHHLNS 663 Query: 471 AAAMDALQ 478 + ++ Sbjct: 664 EICLGTIR 671 >UniRef50_O60072 Putative helicase mug81 n=1 Tax=Schizosaccharomyces pombe RepID=MUG81_SCHPO Length = 1935 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 120/548 (21%), Positives = 206/548 (37%), Gaps = 61/548 (11%) Query: 26 AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRL------FREGGEDTR 78 +++ +Q + +A ++ E+ L+ APTG+GKT A L L + E Sbjct: 274 SYQTLNRIQSLVYPIAYKTNENMLICAPTGAGKTDVALLAMLQTISNYVESMNLMDESEP 333 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 R +I+YI+P+KAL +V + L + L+ TGD Sbjct: 334 LDVHRDDFKIVYIAPMKALAAEVVEKMGKRLAWL------------GLKTRELTGDM--- 378 Query: 139 ERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHLALS 196 + +K IL+TTPE ++ + V VIIDEVH + +RGA + Sbjct: 379 QLTKTEIAETQILVTTPEKWDVVTRKSVGDTQLAEKVRLVIIDEVHMLHD-ERGAVIESL 437 Query: 197 LERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 + R L+ TS + +GLSAT+ + DVA FLG +R + + P P+ Sbjct: 438 VARTQRLVETSQQMIRIVGLSATLPNYLDVADFLGVNRYKGLFYFSSAFRP-----CPIE 492 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + + +I +L + ++F +SR +L Sbjct: 493 QHFIGAKGSPKIV-------NSNIDEACFDKVLKLIQEGHQVMIFVHSRKETINSAKKLR 545 Query: 314 ELYA----ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 E + A L + + S + + ++ + H+ + + R +TE+ Sbjct: 546 EQFFHEGEADLLDNSQHEKYSLAQRDVSKSKNKELKELFKYSMGIHNAGMLRSDRHLTER 605 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRAGHQ 419 G L+ + T++L G+++ A ++I Q+ P L V LQ GRAG Sbjct: 606 LFSMGILKILCCTATLAWGVNLPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRP 665 Query: 420 VGGVSKGLFFPRTRRDL--VDSAVIVECMFAGRL-ENLTPPHNPLDVLAQQTVAAAAMDA 476 S + T L S V + R + L N L T A+ Sbjct: 666 QFESSAVAYIITTHDKLSHYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSW 725 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR----PKLVWNRETGIL 532 L Y R+RR + + S R +A R +V+N++ G L Sbjct: 726 LGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNGYL 785 Query: 533 TARPGAQL 540 + ++ Sbjct: 786 IPKDLGRI 793 Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats. Identities = 117/575 (20%), Positives = 211/575 (36%), Gaps = 82/575 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P + L D P + F AVQ Q +H ++ + V APTGSGKT+AA L Sbjct: 1113 PLPITALHD---PVLEGICAKRFSFFNAVQTQFFHTIYHTDTNIFVGAPTGSGKTMAAEL 1169 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 R H S+++YI+P+KAL + ++ L Sbjct: 1170 A-----------TWRALHNYPKSKVVYIAPMKALVKERVKDWGHRL-----------VEP 1207 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + + + TGDT ++ +I+ITTPE + S ++R+ ++ V +I+DE+H Sbjct: 1208 MGISMIELTGDTNPDVKAV---TNANIIITTPEKWDGITRSWKSRKYVQDVSLIILDEIH 1264 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + GS RG L + + R++ + + + +GLS V +A+D+A +L + Sbjct: 1265 LL-GSDRGPVLEMIVSRMNYVASQTNKKVRVLGLSTAVANANDLANWLNIRDGLFNFRHS 1323 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 P + G ++ R S+ I + ++F Sbjct: 1324 VRPVP-------------LEIYIDGFPGRAYCPRMMSMNKPAFQAI-KTHSPTQPVLIFV 1369 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR-VQSSDVFIARSHHGS 358 +SR L + +D E ++ ++ + F HH Sbjct: 1370 SSRRQTRLTAKDLIAFCGLEDNPRRFLYMDEEELEMIVSEVEDKSLKLALPFGIALHHAG 1429 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVAS 408 +++ R I+E+ + +++ ++ATS+L G++ A ++++ + + Sbjct: 1430 LTENDRKISEELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGGYKDMDLTD 1489 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLD-VLAQ 466 LQ +GRAG Q F + I + + L + P + L VL Sbjct: 1490 VLQMLGRAGRPQFDNSGVARIFVQD---------IKKSFYKHFLHSGFPVESYLHKVLDN 1540 Query: 467 QTVAAA----------AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 A AMD L +Y RV + + + LS + Sbjct: 1541 HLNAEIATGTIDCIQGAMDFLTCTYFYRRVHQNPVYYGADGDDQKSIDTYLSKLVVTAFN 1600 Query: 517 SAFRPKLVW--NRETGILTARPGAQLLAVTSGGTI 549 + ++ N ET T TI Sbjct: 1601 ELEKSACIYRVNEETYAPTTLGRIVSYYYLFHTTI 1635 >UniRef50_Q7RHC8 Drosophila melanogaster CG5931 gene product-related (Fragment) n=3 Tax=Plasmodium (Vinckeia) RepID=Q7RHC8_PLAYO Length = 1136 Score = 309 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 105/547 (19%), Positives = 202/547 (36%), Gaps = 73/547 (13%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYALDR 68 +P+ A +F K A+Q + + +A E+ L+ APTGSGKT A L L+ Sbjct: 600 IPEW---ARETFFCVNIKNLNAIQSKVYDIAFNQFDENLLICAPTGSGKTNIALLCMLNV 656 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + ++ + +I+YISP+KAL + ++ + LK + NL+V Sbjct: 657 I--NSYRLFSGEIEKNSFKIIYISPMKALVNEQVQSFGLRLKAL------------NLKV 702 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVAG 186 TGD + + I++ TPE ++ + + E L ++ +I DE+H + Sbjct: 703 CELTGDVHLSSKE---IDANQIIVMTPEKFEVI-SRKWNEKIMLEKIKLIIFDEIHLLN- 757 Query: 187 SKRGAHLALSLERLDALL-----------------HTSAQRIGLSATVRSASDVAAFLGG 229 RG L + R++ + +GLSAT+ + DV FL Sbjct: 758 EPRGHVLESIITRINRYADNSAVGKGMDSNNATDKRNGIRLVGLSATLPNYEDVGIFLRA 817 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 + + P + G E + + +L+E Sbjct: 818 NPKKGIFYFDQSFRPV-----------QLDQYYIGLKEKKGIKKYNLMNEIAYEKVLEEA 866 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQ 345 ++ ++F +SR + L + + + + E + ++ Sbjct: 867 GKN-QILIFVHSRKETYRTAKILIDKFVKNDNINLFLMDKKISVEILLSEKEAIVNEELK 925 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--- 402 HH + + R + E L+ +V TS+L G+++ A ++I+ + Sbjct: 926 ELLPLGFGIHHAGLKRTDRKLVEDLFADKHLQVLVCTSTLAWGVNLPAHTVIIKGTSIYN 985 Query: 403 -------PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMF--AGRLE 452 LS LQ IGRAG Q K + + + ++ E M+ + +E Sbjct: 986 MNIGDFDELSFMDVLQMIGRAGRPQFDKSGKAIIITEHKNLQLYLSLNNEQMYIESKLME 1045 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 N+ N VL A++ + Y R+ + + + + + + R Sbjct: 1046 NIINIINAEIVLKNIQDFRDAINWFKETYMYIRMLKNTNYYGIENSK-NRIIKNVQNRIN 1104 Query: 513 SGDFSAF 519 +S+F Sbjct: 1105 DIIYSSF 1111 >UniRef50_B0EGZ1 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative n=2 Tax=Entamoeba RepID=B0EGZ1_ENTDI Length = 1804 Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats. Identities = 105/513 (20%), Positives = 190/513 (37%), Gaps = 56/513 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR-SEHALVIAPTGSGKTLAAFLYALDR 68 +L D PA + + VQ + + A E+ LV APTG GKTL A L L Sbjct: 164 ILDDYTRPA-----MLNYTHLNYVQSKVYETAYNTGENMLVCAPTGCGKTLTALLCMLRE 218 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + H + +I+YISP+KAL T++ + L +RV Sbjct: 219 V-------KMHQHDMEHLKIVYISPLKALATEMTTTFKKHL------------ICFKMRV 259 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK 188 TGDT SK +++ TPE ++ + E + ++ +I+DEVH + Sbjct: 260 EEVTGDTNI---SKAAIASTHVIVATPEKFDVLTRKQDAEFVNDIQLLIVDEVHLL-DED 315 Query: 189 RGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA + + R ++ + + +GLSAT+ + DV F+ +P + + Sbjct: 316 RGAVIETIVARTLRMVESQQRPIRVVGLSATLPNYQDVGEFIRA-KPENIFHFDMSYR-- 372 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 VP++ V + + + Y E I+ V R + IVF ++R Sbjct: 373 ---AVPMSTKFIVLPEDEKENKGQQFTQHATDLAYDEAEIV--VKRGKQVIVFVHTRRET 427 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS-NRVQSSDVFIARSHHGSVSKEQR 364 R + F + ++ H+ + + R Sbjct: 428 VLTAQRFIRRMKEKGATEYFTGNKGREFATRIKKLQGKDIKELLEMGIGVHNAGMFRSDR 487 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVASGLQRIG 414 E A ++G L+ +V+T++L G+++ A ++I+ + +S+ LQ G Sbjct: 488 TFIEDAFRNGSLKVLVSTATLAWGVNLPAHTVIIRGTEVFNSDKGCSDKISILDVLQMFG 547 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGR---LENLTPPHNPLDVLAQQTVAA 471 RAG + L I+ M + + L N V T Sbjct: 548 RAGRPQYDSEGAGIIITDKEGLKKYMAILGNMGKIKSTLMNGLADHLNAEIVSGTVTNLE 607 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 A+ Q Y ++++ + ++ + Sbjct: 608 EALQWFQYTYLYVCLKQSP--GGISYDDLNSLI 638 Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats. Identities = 103/568 (18%), Positives = 205/568 (36%), Gaps = 73/568 (12%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAF 62 +P P++ L + +F F Q Q + + + ++ +V APTGSGKT+AA Sbjct: 987 HPLPTTALK-----QYQTFF--NFHYFNPPQTQFFFICFNTNKNVIVGAPTGSGKTVAAE 1039 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L ++FR+ +++YI+P+KAL + + + L Sbjct: 1040 LCML-KIFRD----------TPDKKVVYIAPMKALVKEKMSDWKDKL------------I 1076 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEV 181 + + TGD D+++TTPE + + ++ V VI+DEV Sbjct: 1077 TMGKNIVELTGDFTPD---SAAIAKADVILTTPEKWDGITRLWTKKSYVQKVGLVILDEV 1133 Query: 182 HAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 H + G +RG + + R + L + L+ + + D+ ++G D+ Sbjct: 1134 HLL-GEERGPVIEAIVTRTKQINKKLGIQTRICALTTAIANVDDMMNWIGVDKDSVFNFH 1192 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 ++R PV + + + ++ R ++ I + ++F Sbjct: 1193 SSLR--------PVPLIAHIDGFPT----KAYCPRMATMNKPCYQAI-RLHSPDKPVMIF 1239 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF-ESTSGATSNRVQSSDVFIARSHHG 357 +SR L + + + E T T ++ ++ HH Sbjct: 1240 VSSRRQTRLTAQDLVKFCFNDGNPQKFLHMPFEEMSEITKNITDGILKECLLYGIGMHHA 1299 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ------------VATPLS 405 ++ R ITE+ KS +++ ++ T++L G+++ A ++I+ V PL+ Sbjct: 1300 GLNDHDREITEKLFKSNKIQILITTATLAWGVNLPAHLVIIKGTEYFDGKKHQFVDMPLT 1359 Query: 406 VASGLQRIGRAGH-QVGGVSKGLFFP-RTRRDLVDSAVIVECMFAGRLENLTPPH-NPLD 462 LQ +GRAG Q + ++D + + E + N Sbjct: 1360 --DVLQMMGRAGRPQYDNEGVAVILTYEPKKDFLRKFLFEPFPLESYFETVMADQLNAEI 1417 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 + T A+ L ++ R+ + + + L + K Sbjct: 1418 AVGNVTNVKEAVKFLTFTYYFRRLLKNPNYYGYDGKE--QIGKFLVSKVKDALNELVSAK 1475 Query: 523 LVWNRETGILTARPG-AQLLAVTSGGTI 549 + E + T G + S TI Sbjct: 1476 CIEMDENDVETTTNGRLSTMYYISYRTI 1503 >UniRef50_Q5CRF5 U5snrp Brr2 SFII RNA helicase (Sec63 and the second part of the RNA) n=2 Tax=Cryptosporidium RepID=Q5CRF5_CRYPV Length = 1204 Score = 308 bits (790), Expect = 9e-82, Method: Composition-based stats. Identities = 106/512 (20%), Positives = 190/512 (37%), Gaps = 64/512 (12%) Query: 21 DWFLRAF-----KQPTAVQPQTWHVAARS--EHALVIAPTGSGKTLAAFLYALDRLFR-- 71 +W F +Q + + A + E+ LV APTGSGKT A L L+ + + Sbjct: 513 EWSRECFRCVSVSYLNEIQSRVFETAFKDFEENLLVCAPTGSGKTNIAMLCILNIISQFI 572 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 E + + +I+Y+SP+KAL ++ +L+I L+ + + V Sbjct: 573 EPQNNGKFTLDTSKFKIVYVSPMKALVSEQVESLRIRLR------------PLGILVNEM 620 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGA 191 TGDT S+ + ITTPE ++ ++ +I DEVH + S RG+ Sbjct: 621 TGDTRI---SRSLMEMTQVFITTPEKFDVVTRKSTDGLSEKLKLIIFDEVHMLHDS-RGS 676 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 L + R + + +GLSAT+ + DVA FL + + + P VP Sbjct: 677 VLEGIVARFKK---SFTRLVGLSATLPNFIDVAEFLNVNPKRGLYHFGPEFRP-----VP 728 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + G + + + ++ ++ H +VF +SR Sbjct: 729 LLQ------TFIGIKAKKGFKKLQLMNSLVYDTVIKDITNH-QILVFVHSRKDTIHTAKY 781 Query: 312 LNELYAARLQRSPSIAVD-----AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + + + + + + + SN ++ HH + + R + Sbjct: 782 IRDTATENGMLNLFFSGNNNVSREIILDEVNNIKSNNLKEILPCGIGIHHAGLVRSDRKV 841 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRA 416 E G ++ +V T++L G+++ A ++I Q+ P LS LQ IGR Sbjct: 842 VEDLFSDGHIKVLVTTATLAWGVNLPAHTVIIKGTQIYQPERGEWTELSPLDMLQMIGRG 901 Query: 417 GH-QVGGVSKGLFFP-----RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G Q G+ L++ + +E +L +L N L Sbjct: 902 GRPQYDNNGHGVVITDFDHLTYYLSLLNQQLNIESQLIPKLPDLI---NAEISLGNVQNK 958 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA 502 A+D ++ Y R+ R L Sbjct: 959 RDALDWIKKTFLYIRIIRNPSLYGLDIDEIID 990 >UniRef50_Q8N3C0 Activating signal cointegrator 1 complex subunit 3 n=53 Tax=Eukaryota RepID=HELC1_HUMAN Length = 2202 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 101/505 (20%), Positives = 191/505 (37%), Gaps = 61/505 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + K+ +Q + A + E+ L+ APTG+GKT A L L + + + K Sbjct: 471 FKGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGV---IK 527 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 + +I+Y++P+KAL ++ L+ + + V TGD +S+ Sbjct: 528 KNEFKIVYVAPMKALAAEMTDYFSRRLE------------PLGIIVKELTGDMQLS-KSE 574 Query: 143 LTRNPPDILITTPESLYLMLTSRARETLRG--VETVIIDEVHAVAGSKRGAHLALSLERL 200 + R +L+TTPE ++ + V +I+DEVH + RG L + R Sbjct: 575 ILR--TQMLVTTPEKWDVVTRKSVGDVALSQIVRLLILDEVHLLHED-RGPVLESIVART 631 Query: 201 DALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 + ++ + +GLSAT+ + DVA FL + + + P VP+ Sbjct: 632 LRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLFFFDGRFRP-----VPLGQ--- 683 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 G + + ++ +L +V +VF ++R + L E A Sbjct: 684 ---TFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQVMVFVHARNATVRTAMSLIER-A 739 Query: 318 ARLQRSPSIAVDAAHF-----ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 P H + + + +V+ HH + ++ R + E Sbjct: 740 KNCGHIPFFFPTQGHDYVLAEKQVQRSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFS 799 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGH-QVG 421 +G ++ +V T++L G+++ A ++I+ L + +Q GRAG Q Sbjct: 800 NGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFD 859 Query: 422 GVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA 476 +G+ + L+ +E F LE+L N L T A+ Sbjct: 860 KFGEGIIITTHDKLSHYLTLLTQRNPIESQF---LESLADNLNAEIALGTVTNVEEAVKW 916 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFD 501 + Y R+R + + + Sbjct: 917 ISYTYLYVRMRANPLAYGISHKAYQ 941 Score = 302 bits (774), Expect = 7e-80, Method: Composition-based stats. Identities = 107/507 (21%), Positives = 196/507 (38%), Gaps = 64/507 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 L F VQ Q +H ++ + L+ APTGSGKT+AA L R +K Sbjct: 1321 LYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIF-----------RVFNK 1369 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 TS+ +YI+P+KAL + D+ + R E ++ +V TGD +S Sbjct: 1370 YPTSKAVYIAPLKALVRERM-----------DDWKVRIEEKLGKKVIELTGDVTPDMKS- 1417 Query: 143 LTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLER-- 199 D+++TTPE + + + R ++ V +IIDE+H + G +RG L + + R Sbjct: 1418 --IAKADLIVTTPEKWDGVSRSWQNRNYVQQVTILIIDEIHLL-GEERGPVLEVIVSRTN 1474 Query: 200 -LDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 + + + +GLS + +A D+A +L + P++R + + + Sbjct: 1475 FISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLFNFRPSVRPVPLEVHI-------- 1526 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 G + R S+ I + ++F +SR L A Sbjct: 1527 ----QGFPGQHYCPRMASMNKPAFQAI-RSHSPAKPVLIFVSSRRQTRLTALELIAFLAT 1581 Query: 319 RLQRSPSIAVDAAHFESTSGATSN-RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 + +D E+ + ++ + F HH + + R E+ + +++ Sbjct: 1582 EEDPKQWLNMDEREMENIIATVRDSNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKVQ 1641 Query: 378 CVVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIGRAGH-QVGGVSKG 426 ++ATS+L G++ A ++I+ + LQ +GRAG Q K Sbjct: 1642 VLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKA 1701 Query: 427 LFFPRT-RRDLVDSAV----IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 + ++D + VE G L + N T A+D + Sbjct: 1702 VILVHDIKKDFYKKFLYEPFPVESSLLGVL---SDHLNAEIAGGTITSKQDALDYITWTY 1758 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLS 508 ++ R+ + +L D+ LS Sbjct: 1759 FFRRLIMNPSYYNLGDVSHDSVNKFLS 1785 >UniRef50_C5FL91 ATP-dependent DNA helicase MER3 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FL91_NANOT Length = 1443 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 121/536 (22%), Positives = 216/536 (40%), Gaps = 77/536 (14%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRL 69 LPD F F A+Q +T+ + ++ ++ APTGSGKT+ L A+ +L Sbjct: 212 LPDRFRTIF------PFPVFNAIQSKTFSIIYHRVDNVVLSAPTGSGKTVIMEL-AICKL 264 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + K + +Y++P K+L ++ R+ + ++L+ Sbjct: 265 VSD--------LKDTRFKAIYLAPTKSLCSERCRDWRTKFA------------PLDLQCA 304 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG---VETVIIDEVHAVAG 186 TGDT + + + I+ITTPE M T + ++ +R ++ V+IDEVH + Sbjct: 305 ELTGDTDQIQIRNVQQ--ASIIITTPEKWDSM-TRKWKDHMRLMQLIKLVLIDEVHILKE 361 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 RGA L + R+ ++ +++ + + LSATV ++ D+A++LG D T + PA R Sbjct: 362 V-RGATLEAIVSRMKSV-NSNVRFVALSATVPNSEDIASWLGKDP--TNQHLPAHRERFG 417 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 PV V S + + + IL + + +VF +R A Sbjct: 418 EEFRPVRLQKFVYGYQSNGNDFAF----DRVCEAKLPDILAKHSSKKPILVFCCTRNSAI 473 Query: 307 KLTARLNELYAA-----RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 + L +L+++ RL RSP+ V + + + + HH + Sbjct: 474 TTSKNLAKLWSSANPPQRLWRSPTKPVQVQNAD---------LSGVVITGVAFHHAGLDT 524 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRI 413 R E SG++ + TS+L +G+++ +VI+ + +Q + Sbjct: 525 SDRHAIETGFLSGQINVICCTSTLAVGVNLPCHLVVIKNTVSWQDGGCREYADLEMMQML 584 Query: 414 GRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAG--RLE-----NLTPPHNPLDVLA 465 GRAG Q + G+ R + E + AG LE NL N L Sbjct: 585 GRAGRPQFDDSAVGVILTRK-----ERVAHYEKLVAGSEPLESCLHLNLIDHLNAEIGLG 639 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 T +A+ L ++ R++R + L A + L R D + Sbjct: 640 TVTDIESAIRWLLGTFFFVRLQRNPTYYKLKEGGNRADEEELLRRICENDLELLQE 695 >UniRef50_C6H1C9 Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Saccharomyceta RepID=C6H1C9_AJECH Length = 1999 Score = 308 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 120/576 (20%), Positives = 208/576 (36%), Gaps = 78/576 (13%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + + + E H Sbjct: 278 FKGYKSLNRMQSLLYPVAYKTNENMLICAPTGAGKTDAAMLTILNVIAKNTIPNPLENHD 337 Query: 83 -------RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 +I+Y++P+KAL +V L L + + V TGD Sbjct: 338 ATEFAVITNEFKIVYVAPMKALAAEVTEKLGKRLAWL------------GIEVRELTGDM 385 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSR--ARETLRGVETVIIDEVHAVAGSKRGAHL 193 ++ + I++TTPE ++ E ++ V +IIDEVH + +RGA + Sbjct: 386 QLSKKEIVQ---TQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-ERGAVI 441 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + +GLSAT+ + DVA FL +R + A P V Sbjct: 442 ESLVARTQRQVESTQSLIRIVGLSATLPNYIDVADFLKVNRMAGLFYFDASFRP-----V 496 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ G+ ++ + + + R +VF +SR Sbjct: 497 PLEQ-----HFVGVKGDAGSKKSRENLDIVCFEKVRNMLERGHQVMVFVHSRKETVNAAR 551 Query: 311 RLNELYA----ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L ++ A L A + ++ HH +++ R + Sbjct: 552 LLYQMAVENRCADLFSPLEHKNYAQALRDVKTSRGRELRDLVPKGLGIHHAGMARSDRNL 611 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVI--------QVATPLS--VASGLQRIGRA 416 E+ G L+ + T++L G+++ A ++I Q P+ + LQ GRA Sbjct: 612 MERLFSQGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAQEGKPIDLGILDVLQIFGRA 671 Query: 417 GHQVGGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + F T L V S +E F+ +L N L T Sbjct: 672 GRPQFQDTGIGFICTTHNKLQHYLSAVTSQEPIESRFSRKL---VDNLNAEISLGTVTSI 728 Query: 471 AAAMDALQVDEWYSRV---RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR 527 + A+ L ++R RR P D + GR S W Sbjct: 729 SEAVQWLGYSYLFTRFDYQRRPNP-----AEEPDDYIQWADGRAASQRR--------WQN 775 Query: 528 ETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE 563 IL ++ D + ++ GE Sbjct: 776 CKSILRVATSVEIFNAMMTPMANDADVMKMISMSGE 811 Score = 286 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 111/526 (21%), Positives = 198/526 (37%), Gaps = 75/526 (14%) Query: 4 NPDPSSLLPDVF-----------SPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIA 51 PD S+ D+ +P D + + F+ +Q Q +H + + L+ + Sbjct: 1081 RPDTESVYTDLLDLQPLPISALKNPILEDIYAQRFQFFNPMQTQIFHTLYHTPANVLLGS 1140 Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 PTGSGKT+AA L ++ S+++YI+P+KAL + ++ Sbjct: 1141 PTGSGKTVAAELAM-----------WWAFREKPGSKVVYIAPMKALVRERVQDW------ 1183 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETL 170 RRR + L++ TGD R T DI+ITTPE + + + R + Sbjct: 1184 -----RRRLTAPMGLKLVELTGDNTPDTR---TIRDADIIITTPEKWDGISRSWQTRGYV 1235 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFL 227 R V VIIDE+H + GS RG L + + R++ + S + +G+S +A+D+ +L Sbjct: 1236 RQVSLVIIDEIHLL-GSDRGPILEIIVSRMNYIASQSKGSVRLLGMSTACANATDLGNWL 1294 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 G + V PV + G S+ I I + Sbjct: 1295 GVKEGLFNFR---------HSVRPVPLEIFIDGFPEQRG---FCPLMQSMNRPIFLAIKN 1342 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQS 346 + IVF SR L + + + + S + ++ Sbjct: 1343 -HSPEKPVIVFVASRRQTRLTAKDLINFCGMEDNPRRFLHMSEEDLQLNLSRVKDSSLKE 1401 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV--------- 397 + F HH + + R ++E+ + +++ +VATS+L G+++ A +V Sbjct: 1402 ALSFGIGLHHAGLVESDRQLSEELFANNKVQILVATSTLAWGVNLPAHLVVVKGTQFFDA 1461 Query: 398 -IQVATPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGR 450 I+ + + LQ +GRAG Q F + + + + VE Sbjct: 1462 KIEGYKDMDLTDVLQMLGRAGRPQFDSSGIARIFTQDSKKGFYKHFLHTGFPVESTLHKV 1521 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 L T A+D L ++ R+ + + L Sbjct: 1522 L---HDHLGAEISAGTITTKQDALDYLTWTFFFRRLHKNPSYYGLE 1564 >UniRef50_A7AW09 Helicase, putative n=2 Tax=Eukaryota RepID=A7AW09_BABBO Length = 1798 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 121/562 (21%), Positives = 218/562 (38%), Gaps = 75/562 (13%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR 71 D + F ++ +Q ++ A ++ ++ L+ APTG GKT A L AL Sbjct: 153 DSLPQWAQKAFA-GIEKLNTIQSMVYNTAFKTSQNMLISAPTGCGKTNVALLCALQ---- 207 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 ++ K ++++Y++P+KAL ++V L ++ LRV Sbjct: 208 --NFESYFNGGEKNTKVVYVAPMKALASEVTGKFSKSL------------VDLGLRVREV 253 Query: 132 TGDT--PAQERSKLTRNPPDILITTPESLYLML-------TSRARETLRGVETVIIDEVH 182 TGDT P E + D+LITTPE L ++ T L V +IIDEVH Sbjct: 254 TGDTQVPTSELGSI-----DVLITTPEKLDVITRNSYSTGTQSDDSFLTKVSCLIIDEVH 308 Query: 183 AVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + + RG L + R+ L+ ++ + +G+SAT+ + DVA FL P Sbjct: 309 LLNDT-RGIVLETVVARILRLIESTQETRRIVGISATLPNWKDVAEFLRVAPEHAYHFGP 367 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 RH + V D++ G+++ I+ + + I+F Sbjct: 368 EYRHVPLSQVFYGVKGKDIT---------------GTMYEICFDHIIQTLENGKQCIIFV 412 Query: 300 NSRGLAEKLTARLNELYAARLQRS----PSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 +SR +L E+ P+ + + + + V+ + H Sbjct: 413 HSRNETSMTANKLIEMIQESPSHQKLFQPNRDIYQRFHKQLKKSKHDNVERFAEYCMSIH 472 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ--------VATPLSVA 407 H + + R + E K G ++ +V+TS+L G+++ A ++I+ V ++ Sbjct: 473 HAGMVRRDRDVVENMFKEGLIKVLVSTSTLAWGVNLPANCVIIKGTFIGGLGVDRNINYL 532 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTR--RDLVD---SAVIVECMFAGRLENLTPPHNPL 461 Q +GRAG Q G+ + D + + +E LEN N Sbjct: 533 ELTQIMGRAGRPQFDTSGTGVLITEHKNLNDYIKMQTEQLPIESHLHRHLENAL---NAE 589 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 VL A A+ L+ Y R+R+ A + + L + R Sbjct: 590 IVLGTVVDEADAVTWLRYTFLYVRMRKNALKYGIKSSNDGEIFNQLHKIVRDAAINLDRS 649 Query: 522 KLV-WNRETGILTARPGAQLLA 542 KL+ ++ +G + ++ A Sbjct: 650 KLIRYHEPSGEFASTDLGRIAA 671 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 100/507 (19%), Positives = 187/507 (36%), Gaps = 73/507 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFL 63 P P+ L D F K +Q Q ++ LV APTGSGKT+ A L Sbjct: 1028 PMPTKALCDKFDYQH--------KYFNPLQTQMLSYCLYHDDNLLVGAPTGSGKTVVAEL 1079 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 RL+R +++YI+P+KAL + ++ Sbjct: 1080 AMF-RLWRTQVCK----------KVVYIAPLKALAYERLKDWNKKFGMFK---------- 1118 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVH 182 +V TGD+ + + D+++TTPE + + R+ +R V ++IDEVH Sbjct: 1119 ---KVVEVTGDSRTSVKEIVN---SDVIVTTPEKWDGISRHWKTRKYVRSVGLIVIDEVH 1172 Query: 183 AVAGSKRGAHLALSLERLD---ALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G RGA L + RL ++ + + LS + + ++A ++ P Sbjct: 1173 LL-GESRGAVLEAIVSRLCFISKFTQSNTRLVCLSTALANPGEIADWISVSSTKVFNFSP 1231 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 A+R + + + G ++ R S+ + I+ + +VF Sbjct: 1232 AVRPVKCHLYID------------GFPLKAYCPRMNSMNRPAFSTIMRHDISA-PVLVFV 1278 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 +SR L + R +I + A F + HH + Sbjct: 1279 SSRRQTRTTARDFVSLLQVKSLRWTNIDISARPF------IDENLNVFVEHGIGIHHAGL 1332 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASG 409 R E+ GE++ ++AT++L G+++ A ++++ SV Sbjct: 1333 HDSDRIRIEEMYLKGEIKVLIATATLAWGVNLPAKIVIVKGTEYYDGKTKKYADYSVTDI 1392 Query: 410 LQRIGRAGHQV-GGVSKGLFFPRTRR-DLVDSAVIVEC-MFAGRLENLTPPHNPLDVLAQ 466 LQ +GRAG +V + + +R+ D + + + E L N Sbjct: 1393 LQMVGRAGRRVFDKEAYAYVYTESRKVDFYKAFMFSPFPAESSFHERLLDSMNSEIASGT 1452 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWK 493 A + L+ ++ R+++ + Sbjct: 1453 IANKAQGLQYLKNTFFFKRLKKNPQYY 1479 >UniRef50_C8S8J7 DEAD/DEAH box helicase domain protein n=3 Tax=Archaeoglobaceae RepID=C8S8J7_FERPL Length = 688 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 107/544 (19%), Positives = 205/544 (37%), Gaps = 69/544 (12%) Query: 9 SLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKTLAAFLYAL 66 L D S D R ++ Q + +++ +V PT SGKTL A L + Sbjct: 5 DALSDHLSKYVVDILKKRGIERLYPPQEEAVRKGLFSNKNLVVAIPTASGKTLIAELAMI 64 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + R G + LY P++AL + E+ + Sbjct: 65 YEVIRGG-------------KCLYTVPLRALAGEKFEEFSKW-------------EEIGV 98 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 ++GI TGD +++ DI++TT E +L + A LR + +++DE+H + Sbjct: 99 KIGISTGDYESRDE---WLGECDIVVTTSEKADSLLRNEA-SWLRNLSLLVVDEIHLIDS 154 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 +KRGA L + + +L L + + + I LSAT+ +A ++A +L + + P + Sbjct: 155 AKRGATLEVLIAKLKKL-NPNLRIIALSATIPNADEIAEWLNAELIKSEWRPTPLYE--- 210 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + P + + +S IE I+ + +VF ++R AE Sbjct: 211 YVFYPGRLLKFENGFLREVKAESS----------IERLIVRTLEEGGQVLVFESTRRNAE 260 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 +++ ++ + +A E G S ++ + HH + QR Sbjct: 261 SYAVKISGYTKEFVEDNSDVAEKV--LEENEGEMSRKLSECVKLGSAFHHAGLLNSQRVA 318 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQV--------ATPLSVASGLQRIGRAGH 418 E+A + G ++ +VAT +L G+++ A ++++ P+ V+ Q GRAG Sbjct: 319 IEKAFREGRIKVLVATPTLAAGVNLPARRVILKSYRRYDSGAYAPIMVSEYKQMAGRAGR 378 Query: 419 -QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 + + + +TR + + + E AG E + L T++ + Sbjct: 379 PGLDEYGEAIIVTKTRDEALK---VAERYLAGEPEKVISKLGSETHLRFHTLSLISEGIA 435 Query: 478 QVDEWYSRVRRAAPWK-----DLPRRVFDATLDM----LSGRYPSGDFSAFRPKLVWNRE 528 E + L + L + + Y F KL + Sbjct: 436 SSFEDLLDFYSTTFFAYQNEFTLEWEIRRIVLQLEKWGMIVEYAPTSFGKLVSKLYIDPL 495 Query: 529 TGIL 532 +G + Sbjct: 496 SGFI 499 >UniRef50_Q02AZ8 DEAD/DEAH box helicase domain protein n=3 Tax=Bacteria RepID=Q02AZ8_SOLUE Length = 786 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 116/508 (22%), Positives = 195/508 (38%), Gaps = 73/508 (14%) Query: 2 ADNPDPSSLLPDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + S +P R R ++ Q + +H +++ PT SGKTL Sbjct: 47 PASEGEFSEMPAAVDSRLRAALAKRGIERLYTHQADAFDQIQAGKHVVIVTPTASGKTLC 106 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 L L+ L R+ + +R +Y+ P KAL D Q ++ + E Sbjct: 107 YNLPVLNLLLRD-----------EGARAMYLFPTKALAEDQLHEFQGAVEEMGSE----- 150 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML---TSRARETLRGVETVI 177 +R GDTP R + R+ ++++T P+ L+ + +R + ++ Sbjct: 151 -----IRAFTYDGDTPQDARRAI-RSRANVVLTNPDMLHSGILPHHTRWARYFENLRYIV 204 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 IDE+H G G+HLA L RL + ++ Q I SAT+ + ++A L G+ Sbjct: 205 IDELHYYRGVY-GSHLANLLRRLSRICEFYNSKPQFICCSATIANPKELAEALTGEPFEL 263 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 V A R + I ++ G S L + + Sbjct: 264 VERNGAPRGEKFFIFYNPPVVN------------RQLGIRRSYIAETRRMALKFIENNLQ 311 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 T+VF N+R E L L + S + R Sbjct: 312 TLVFANNRLATEVLVTYLKDACDRGPIPSET--------------------------VRG 345 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 + G +R EQ+L++G++R VVAT++LELGID+G++D V+ P ++AS QR G Sbjct: 346 YRGGYLPRERREIEQSLRAGKIRAVVATNALELGIDIGSLDAVVMAGYPGTIASSWQRAG 405 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVI--VECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 RAG + + + +D ++ + F E+ L++ AA Sbjct: 406 RAGRRQSTSAAVMVASSAP---LDQYIVEHPDYFFGRSPEHAYINPENLEIFLAHLKCAA 462 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVF 500 L+ DE + R A + L F Sbjct: 463 FELPLRDDEKFGRHDLAEICRYLEEAGF 490 >UniRef50_C1ZM72 Lhr-like helicase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZM72_PLALI Length = 689 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 151/671 (22%), Positives = 246/671 (36%), Gaps = 106/671 (15%) Query: 43 RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ 102 R ++ A T +GKT AAFL L + + R LYI P+KAL D Sbjct: 3 RKSDLILAARTAAGKTEAAFLPILSDV---------CTAPVGSVRALYIGPLKALINDQF 53 Query: 103 RNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML 162 R L+ + + V GD A ++ +L P +L+ TPESL +L Sbjct: 54 RRLEELCEY------------AEIPVHRWHGDVSADKKKQLVTCPGGVLLITPESLESLL 101 Query: 163 TSRA---RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS 219 +R+ + V+IDE+HA+ G++RG L L RLD T + + LSAT+ Sbjct: 102 INRSTALSRIFHSLSFVVIDELHALLGNERGTQLRSQLYRLDHHAITRPRILALSATIGD 161 Query: 220 ASDVAAFLGG---DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGS 276 A ++ D + + + Q R+ +D +DS Sbjct: 162 LKAAAEWIRPGDQDSVEIICDEGDEKRIQFRLHAYSQILD----------KDSDPSDPEY 211 Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST 336 + P L + R ++F NS+ + E T RLNEL + Sbjct: 212 VSPEDVFQELFDNYRGSKNLIFANSKSVIELTTDRLNELGRKNSTGEEFL---------- 261 Query: 337 SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 HHGS+SK+ R TE+ ++ + +S+LELGID+G V Sbjct: 262 -----------------IHHGSISKDIREETERLMQGQRPYTAICSSTLELGIDIGNVRG 304 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR-------------DLVDSAVIV 443 V Q+ SV+S LQR+GR+G + G + F + DL+ + Sbjct: 305 VGQIGPCWSVSSMLQRLGRSGRRDGETHQLRMFIIEKHPGAHSELSDRLYPDLLQGIALT 364 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFDA 502 E M +E+ L L QQ ++ A + + ++ + + + F Sbjct: 365 ELMLDRWVESPRTRPFDLSTLTQQILSVIAERGGILATSLFDQLVCDGVFSFINSQQFVT 424 Query: 503 TLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEG 562 L L+ D P G +L + + Y+ + Sbjct: 425 LLRGLASH----DLIEQTP--------------DGLLILGLFGERFVRHYEFYAAFISPL 466 Query: 563 EEK--AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFW 620 E + +GSR +G L E V + + L W++ + ++ V R + P + Sbjct: 467 EYRVVSGSRVLGRLTRENVPPL--GEHLILAGRRWQVVNVDHEREEVQVQSARGRKPPMF 524 Query: 621 RGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVP 680 G E+ + + L A + L E +A GL AT V Sbjct: 525 FSSGGEIAHEIRVKMREVLQSSAVPVYLDSFAVKLLNEARQVATDSGL------ATSDVV 578 Query: 681 GSRHLVLERCR 691 + V+E Sbjct: 579 PLTNDVVEWFP 589 >UniRef50_B8FB49 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB49_DESAA Length = 1002 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 152/699 (21%), Positives = 242/699 (34%), Gaps = 118/699 (16%) Query: 28 KQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSR 87 K+ Q Q + R E+ + PT SGKT L L+ L ++ + Sbjct: 59 KKLFKHQVQAIDLIRRGENIVAATPTASGKTFMYNLPVLEALAQD-----------PGAH 107 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 LY+ P+KAL D + + + E I GDT + R K+ P Sbjct: 108 ALYMFPLKALTQDQIKTFRKLAANM----------ENGPTAEIYDGDTTSYRRRKIKEAP 157 Query: 148 PDILITTPESLYLML---TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 P+ + T PE L+L ++ +I+DEVH G G+H+A RL + Sbjct: 158 PNAIFTNPEMLHLGFLPYHHNWEGFFGKLKFIIVDEVHTYRGVM-GSHMAWVFARLLRVC 216 Query: 205 H---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 + Q + SAT+ + D+A L G V A R Sbjct: 217 RYYGSDPQFVMCSATIANPRDLACRLTGRNFKLVEKSTAPR------------------- 257 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 G + + + R TIV+T SR + E ++ +E Sbjct: 258 --GARHVVFMNPQTGPAQTAIMLLKAALARGLRTIVYTQSRKMTELISMWASERAGEFKD 315 Query: 322 RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 + ++ E+R E L SGEL VV+ Sbjct: 316 K-----------------------------ISAYRAGYLPEERREIETKLASGELLAVVS 346 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TS+LELGID+GA+DL I V P +V + QR GR G + + L D +D Sbjct: 347 TSALELGIDIGALDLCILVGYPGTVMATWQRGGRVGRDLSESAMVLI---AGEDALDQYF 403 Query: 442 I--VECMFAGRLEN-LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 + E F+ +EN + P NP + A+ AAA L +D+ L Sbjct: 404 MRNPEDFFSRSVENAVINPLNP-VISARHIECAAAELPLNLDDPI-----------LQSG 451 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 D T+ L KL+ + + L A V G+ + V Sbjct: 452 ELDKTIYRL----------EQEGKLLRDAQGSRLYASKKKPQRDVDLRGS-GSQFTIMVA 500 Query: 559 LPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 PE E G + VG++D + E+ I ++R+ + + V P + Sbjct: 501 DPEDPEGPGGQSVGQIDLFRAFRETHPGAIYLHLGRTYRVDALDLARRTVFARPAQVDYY 560 Query: 618 PFWRGEGNGRPAELGEM---------IGDFLHLLADGAFFSGTIPPWLAEENTIANIQG- 667 RG+ + E+ + G F S + + T ++ Sbjct: 561 TQARGDKDTEILEIFDEKTVWGTRVYCGRLKVTDQVTGFESKKVRTRKSLGITPLDLPSN 620 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYG 706 E Q I ++ V ++ +G I H+ G Sbjct: 621 TFETQGLWFEIPGHTQKAVEDKFMHFMGGIHAIEHAAIG 659 >UniRef50_Q9VF56 CG5205 n=16 Tax=Coelomata RepID=Q9VF56_DROME Length = 2183 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 111/570 (19%), Positives = 213/570 (37%), Gaps = 71/570 (12%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAF 62 P P S L +V + L F +Q Q +H +++ L+ APTGSGKT+ A Sbjct: 1316 RPLPVSCLKNVVYES-----LYKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIVAE 1370 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 + L ++ +++YI+P+KAL + IAD +R + Sbjct: 1371 IAIFRAL-----------NQNPKCKVVYIAPLKALVKE----------RIADWEQRFQRS 1409 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 + L+V TGD +++TTPE + S + RE ++ V ++IDE+ Sbjct: 1410 SLGLKVVELTGDVTPD---IQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIVIDEI 1466 Query: 182 HAVAGSKRGAHLALSLER---LDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 H + G RG + + + R + + + + +GLS + +A D+A +LG ++ Sbjct: 1467 HLL-GEDRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGINKMGLYNFK 1525 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 P++R +++ + +G + R ++ I TIVF Sbjct: 1526 PSVRPVPLQVHI------------NGFPGKHYCPRMATMNRPTFQAI-RTYSPCEPTIVF 1572 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR-VQSSDVFIARSHHG 357 +SR L A + + E + ++ F HH Sbjct: 1573 VSSRRQTRLTALDLITFVAGESNPKQFLHIPEDEIELILQNIREQNLKFCLAFGIGLHHA 1632 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVA 407 + ++ R E+ + +++ +VAT++L G+++ A +VI+ + + Sbjct: 1633 GLQEQDRKCVEELFLNRKIQILVATATLAWGVNLPAHLVVIKGTEYFDGKVKKYVDMPIT 1692 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRRD------LVDSAVIVECMFAGRLENLTPPHNP 460 LQ +GRAG Q + + L D + + E++ N Sbjct: 1693 DVLQMMGRAGRPQFDNEGVAVVLVHDEKKNFYKKFLYDPFPVESSLLGVLPEHI----NA 1748 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 V AA+D L ++ R+ R + L + + +S + Sbjct: 1749 EIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQDIEPENVNNFMSNLVERVVYELSA 1808 Query: 521 PKLVWNRETGIL-TARPGAQLLAVTSGGTI 549 + R+ ++ T S T+ Sbjct: 1809 AACLVERDGCLIPTFLGRISSYYYLSYRTM 1838 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 113/532 (21%), Positives = 195/532 (36%), Gaps = 65/532 (12%) Query: 2 ADNPDPSSL-----LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGS 55 A P P S+ + R F K+ +Q + VA S E+ LV APTG+ Sbjct: 455 ASEPPPLSVGNKRVQIEELDDVGRLAFA-NCKELNRIQSVVFPVAYHSNENMLVCAPTGA 513 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKT A L + + + R +I+YI+P+KAL ++ N LK + Sbjct: 514 GKTNVAMLSIVHTI---RCHLEQGVINRDEFKIVYIAPMKALAAEMVDNFSKRLKSLQ-- 568 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGV 173 + V TGD + +K IL+TTPE ++ + + + V Sbjct: 569 ----------IAVRELTGDI---QLTKAEMAATQILVTTPEKWDVVTRKGSGDVALISLV 615 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGD 230 E +IIDEVH + G +RG + + R L+ +S + +GLSAT+ + DVA FL + Sbjct: 616 ELLIIDEVHLLHG-ERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVN 674 Query: 231 RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL 290 + + P VP+ G + + ++ V Sbjct: 675 PMKGLFYFDSRFRP-----VPLDTN------FVGIKSVKQLQQIADMDQCCYQKCVEMVQ 723 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF----ESTSGATSNRVQS 346 +VF ++R + + EL + + D+A S + + ++ Sbjct: 724 EGHQIMVFVHARNATVRTANVIRELAQQNNTSALFLPKDSAAHGLATRSIQRSRNKQLVE 783 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----- 401 HH + + R + E+ G + +V T++L G+++ A ++I+ Sbjct: 784 LFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGTDIYDA 843 Query: 402 -----TPLSVASGLQRIGRAGH-QVGGVSKGLFFP-----RTRRDLVDSAVIVECMFAGR 450 L + LQ GRAG Q G L+ + +E F Sbjct: 844 KHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDKLNHYLSLLTNQFPIESNF--- 900 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA 502 + L N L T A++ L + R+R + + Sbjct: 901 VNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYGIEYSELEK 952 >UniRef50_A2DN52 Type III restriction enzyme, res subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DN52_TRIVA Length = 2043 Score = 306 bits (785), Expect = 3e-81, Method: Composition-based stats. Identities = 118/591 (19%), Positives = 216/591 (36%), Gaps = 83/591 (14%) Query: 13 DVFSPATRDWFLRAF---KQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDR 68 D + R +Q + + S E+ L+ APTG+GKT+ A L + Sbjct: 347 DSLDEKYQTIIGREITSQGSLNLIQSKVYQQIEESNENLLISAPTGAGKTIIAVLAMIKT 406 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L E S+ +YI+P+K+L ++ G +V Sbjct: 407 LLTENN-----------SKAIYIAPMKSLVQEMVAKFTEIFDGYK-------------KV 442 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAVAGS 187 TGD+ A S DI+++TPE L ++ + + ++ VIIDE+H + S Sbjct: 443 IELTGDSSA---SVSQLQGYDIIVSTPEKLDIISRKTGNQTFIDTIKLVIIDEIHLLHNS 499 Query: 188 KRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 RG L + RL L + + IGLSAT+ + D+A FL V R Sbjct: 500 -RGPVLEALVARLKMLKYVSSSDIRLIGLSATMPNVGDIAEFLEVPEQGLFVFGEEFRPC 558 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + G E + S+ Y I + + T++F +SR Sbjct: 559 LLH------------KTFVGFKERKKVHLKASMNEYCYQIIEETLKNKHQTLIFVHSRRE 606 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 A+ + ++ + + G + +++S HH + +E R Sbjct: 607 AQDTALAFYNMAISKGEADNFSNDQNYLLNISEGIINEKLKSILPKGFAFHHAGLLREDR 666 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------LSVASGLQRIG 414 + E+ ++ ++ +V+T++L G+++ A +I+ + P LS LQ G Sbjct: 667 SRIEEEFRNKRIKVLVSTATLAWGVNLPAHIAIIKGTNIYNPELGDFDNLSHLDVLQMFG 726 Query: 415 RAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 RAG + + + + S + +E F + T N L Sbjct: 727 RAGRPGLDIYGEAYLLTEHQNLHYYVSALTSQIPIESHFLREI---TNHLNAEIALGTIG 783 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRV-FDATLDMLSGRYPSGDFSAFRPKLVWNR 527 A +D L+ Y R++++ L + V + L L + S + + + +N Sbjct: 784 TVAQGVDWLKETFLYIRMQKSPKMYGLSKNVKIEQRLADLI--HSSCLLLSEKKLIFYNT 841 Query: 528 ETGILTARPGAQLLA------------VTSGGT-IPDRGMYSVLLPEGEEK 565 + + ++ A VT+ T I D + + E K Sbjct: 842 NEDTIESTDIGRIAANYYITEETMSNFVTNLSTDINDVDLLRLFSLASEFK 892 >UniRef50_B8YFQ3 Meiotic helicase n=2 Tax=Sordaria macrospora RepID=B8YFQ3_SORMA Length = 1561 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 112/499 (22%), Positives = 186/499 (37%), Gaps = 55/499 (11%) Query: 18 ATRDWFLRAFKQ------PTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLF 70 + R F++ AVQ + + V +++ ++ APTGSGKT L Sbjct: 251 SVRQALPSRFQEVFPYELLNAVQSKCFGVVYGSTDNVVISAPTGSGKTAILELAICKLAL 310 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 G E+ +I+Y +P KAL ++ R+ + + L+ Sbjct: 311 DRGNEN---------FKIVYQAPTKALCSEKARDWVKKF------------SHMGLKCAE 349 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLT--SRARETLRGVETVIIDEVHAVAGSK 188 TGDT E ++ I++TTPE + R+ L+ VE +IDEVH + Sbjct: 350 LTGDTSQAEMRRV--GEASIIVTTPEKWDSITRKWQDHRKLLQLVELFLIDEVHILKDV- 406 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RGA L + R+ + + + + LSATV ++ D+A +LG R T PA R Sbjct: 407 RGATLEAVVSRMKTI-GANVRFVALSATVPNSDDIAKWLG--RNHTTQQLPAHREVFGEE 463 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 PV V + S P +L + + + +VF +R E Sbjct: 464 FRPVKLQKFVYGYECNGNDFIFDKFMDSKLP----KLLSKHSQRKPILVFCFTRKSCEST 519 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 A L E + + + S +Q F HH + + R E Sbjct: 520 AAMLAEDASKLSESKALWPIPKKRIPVV----SRELQEIVQFGVAFHHAGLDAQDRVAIE 575 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAGH-Q 419 Q +GEL + TS+L +G+++ +V++ S +Q +GRAG Q Sbjct: 576 QHFLNGELSVICCTSTLAVGVNLPCHTVVMKGTVAFMDDKLQEYSDLEVMQMLGRAGRPQ 635 Query: 420 VGGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDAL 477 + + R + + V + + L NL N L + ++A L Sbjct: 636 FDTSATAIILTRAANKQRYEKMVSGQEILESTLHLNLIEHLNSEICLGTISDISSAKMWL 695 Query: 478 QVDEWYSRVRRAAPWKDLP 496 R+RR L Sbjct: 696 GGTFLSVRLRRNPDHYRLT 714 >UniRef50_B6HP67 Pc22g02150 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HP67_PENCW Length = 1512 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 117/543 (21%), Positives = 206/543 (37%), Gaps = 61/543 (11%) Query: 27 FKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F A+Q +++H S ++ ++ APTGSGKT+ L A+ RL K + Sbjct: 214 FPLFNAIQSKSFHSVYNSNDNIVLSAPTGSGKTVVMEL-AICRLVN--------TLKDER 264 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 +++Y +P K+L ++ R+ + +NL+ TGDT + + Sbjct: 265 FKVVYQAPTKSLCSERFRDWNSKF------------SSLNLKCAELTGDTDHMQLRNV-- 310 Query: 146 NPPDILITTPESLYLMLTSRARETLRG---VETVIIDEVHAVAGSKRGAHLALSLERLDA 202 I+ITTPE M T + ++ ++ V+ +IDEVH + + RGA L + R+ Sbjct: 311 QASQIIITTPEKWDSM-TRKWKDHMKLMQLVKLFLIDEVHILKET-RGATLEAVVSRMKN 368 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 + ++ + + LSAT+ ++ D+A +LG D T + PA R PV V A Sbjct: 369 I-GSNVRFVALSATIPNSEDIATWLGKD--ATNQHVPAHREHFGEEFRPVMLKKVVYGYA 425 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 S + + GS P ++ + ++F +R + L L+ Sbjct: 426 SSLNDFAFDKVCGSKLPE----VIGMHSCKKPILIFCCTRNSSLATAKELARLFTLTNPP 481 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 + E A + ++++ V HH + R E + G + + T Sbjct: 482 ARLWKEPKKRLE----AHNEDLKTTLVAGVAFHHAGLGPADRHTVETGFREGNISVICCT 537 Query: 383 SSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTR 433 S+L +GI++ ++I+ S +Q +GRAG Q + + R Sbjct: 538 STLAVGINLPCHLVIIKNTVSWQDGGCKEYSDLEMMQMLGRAGRPQFDDSATAVILTRK- 596 Query: 434 RDLVDSAVIVECMFAG--RLE-----NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 + E + G LE NL N L + +A+ L + R+ Sbjct: 597 ----ERVAHYERLVQGSESLESCLHLNLIDHLNAEIGLGNISDIESAVKWLAGTFLFVRL 652 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 RR L D L + D R + E+ T A Sbjct: 653 RRNPTHYKLKEGANQEDEDELLRQICEKDIDLLRKCDLVEAESLSSTQFGDAMARYYIRF 712 Query: 547 GTI 549 T+ Sbjct: 713 ETM 715 >UniRef50_D1H2W4 Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=4 Tax=Embryophyta RepID=D1H2W4_VITVI Length = 1188 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 126/616 (20%), Positives = 224/616 (36%), Gaps = 93/616 (15%) Query: 11 LPDVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 +PD S T+ + + Q ++ + ++ +V T SGK+L + L+ L Sbjct: 406 IPDELSENTKSALEHIGVTRLYSHQAESIQASLGGKNVVVATMTSSGKSLCYNVPVLEVL 465 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + S LY+ P KAL D R L KG ++V+L++G Sbjct: 466 SQNLL-----------SCALYLFPTKALAQDQLRALLAMTKG----------SDVSLKMG 504 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLML---TSRARETLRGVETVIIDEVHAVAG 186 + GDT ++R R+ +LIT P+ L++ + + R L + VIIDE HA G Sbjct: 505 VYDGDTSEEDRM-WLRDNARLLITNPDMLHMSILPFHGQFRRILSNLRFVIIDEAHAYKG 563 Query: 187 SKRGAHLALSLERLDALLH----TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP--- 239 + G H A L RL L H + I +AT + D A L + +++ Sbjct: 564 A-FGCHTAFILRRLRRLCHHVYGSDPSFIFCTATSANPRDHAMELANLPTLELIHNDGSP 622 Query: 240 ------AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 A+ +P + ++++ E+ R IW I + + Sbjct: 623 SGPKFFALWNPALCSKTVSKRSTSSTNISKSADENVIVKRSSPIWE-ISCLFAEMIQHGL 681 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 I F SR L E + + E+ V Sbjct: 682 RCIAFCKSRKLCELVLSYTREIL-------------------------QETAPHLVDSIC 716 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 ++ + R E SG+L + AT++LELGID+G +D+ + + P S+AS Q+ Sbjct: 717 AYRAGYVAQDRRRIESDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQA 776 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVI--VECMFAGRLENLTPPHNPLDVLAQQTVAA 471 GR+G + S ++ +D + + +F +E VL Q V A Sbjct: 777 GRSGRRER-PSLAIYVAFEG--PLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCA 833 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A L + Y L A + + Y S D S +WN Sbjct: 834 ALEHPLSL--LYD---EKYFGSGLNS----AITSLTNRGYLSFDPSRGSSSRIWNYIGHA 884 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV-YESRVNDIITL 590 + A+ + Y V+ +K + E++E ++ + Sbjct: 885 KIPSHAVSIRAI-------ETEKYKVI-----DKGRDELLEEIEESKAFFQVYDGAVYMH 932 Query: 591 GATSWRIQQITRDQVI 606 ++ ++++ + + Sbjct: 933 QGKTYLVKELDISRKL 948 >UniRef50_D2VZX0 Dead box RNA helicase n=1 Tax=Naegleria gruberi RepID=D2VZX0_NAEGR Length = 2295 Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats. Identities = 116/571 (20%), Positives = 220/571 (38%), Gaps = 72/571 (12%) Query: 4 NPDPSSLLPDVFSPATRD-WFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAA 61 +P P + L + P + + K VQ Q +H+ + E+ L+ APTGSGKTLAA Sbjct: 1410 DPLPITCLNN---PEYEKLYADKGIKYFNPVQTQIFHMTYHTDENILIGAPTGSGKTLAA 1466 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 L RLF + +++YI+P+KAL + E ++ Sbjct: 1467 ELCIF-RLFNT----------KPNQKVIYIAPLKALVRERL-----------VEWEKKFV 1504 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDE 180 ++ ++ TGD + DI+ITTPE + + R +R V +++DE Sbjct: 1505 QKLGKKMVELTGDFTPDVK---LLKEADIVITTPEKWDGISRNWQNRSYVRDVGLIVMDE 1561 Query: 181 VHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +H + GS RGA L + R+ + T + +GLS + +A+D+A +LG + Sbjct: 1562 IHLL-GSGRGAILEVITSRMRYISWNTQTHIRLMGLSTNMANATDLADWLGVGQRGLFNF 1620 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 ++R ++I + SG ++ R S+ IL ++ ++ Sbjct: 1621 KSSVRPVPLQISI------------SGFSGKNYCPRMNSMNKPAYQAILR-HSNNKPCLI 1667 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN-RVQSSDVFIARSHH 356 F +SR L +A + +D S + ++ + HH Sbjct: 1668 FVSSRRQTRLTAMDLIGYCSADENPHRFLRMDQNEVISALELARDTHLKQFLQYGIGIHH 1727 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVA--------- 407 ++ + + E+ SG+++ +VATS+L G+++ A ++I+ + Sbjct: 1728 AGLTPSDKKLVEELFHSGKIQVLVATSTLAWGVNLPAYFVIIKGTEFFEPSTKRYEDYPL 1787 Query: 408 -SGLQRIGRAGHQVGGVSKGLFFPR--------TRRDLVDSAVIVECMFAGRLENLTPPH 458 LQ GR+G G ++G F +R L + I + +++ Sbjct: 1788 VDVLQMAGRSGR-PGFDTEGRVFIMVHDIKKNFYKRFLYEPFPIESSLHTQLHDHI---- 1842 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSA 518 N V +D L + R+ + + + ++ LS + S Sbjct: 1843 NAEIVSGTIKTKQDCLDYLTWTFMFRRLVQNPCYYGIEDLSYEGLNKWLSTKITSIIDDL 1902 Query: 519 FRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 LV + + + + + T T Sbjct: 1903 EYAGLVKAIDLNLDKKKRWEVMASQTQSSTF 1933 Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats. Identities = 113/568 (19%), Positives = 201/568 (35%), Gaps = 74/568 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P S+ D + + VQ ++ A ++ E+ LV APTG GKT A + Sbjct: 552 PISIFEDW-----AQLAFKGYTHLNRVQSDVFYSAYKTSENMLVCAPTGCGKTNIAMMTV 606 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + G +R+ +I+YI+P+KAL ++ N L + Sbjct: 607 LREI---GQHFKGGKIRREEFKIIYIAPMKALAAEMVENFSKRLA------------PLG 651 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV-ETVIIDEVHAV 184 + V TGD +R +++TTPE + + + L + +IIDEVH + Sbjct: 652 ITVKEMTGDMQLTKREVQQ---TQMIVTTPEKWDVTTRKASDQALIQLTRLIIIDEVHLL 708 Query: 185 AGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 RG + + R + T+ + +GLSAT+ + DVA FL D + Sbjct: 709 NED-RGPVIESIVARTLRQVETTQSMIRLVGLSATLPNYMDVANFLRVDPHSGLHFFDGS 767 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P VP+ G + R L + R + +VF +S Sbjct: 768 YRP-----VPLEQS------FIGVSIRNPIARNKEYNQIAFNRTLKNLKREKQVMVFVHS 816 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHF-------ESTSGATSNRVQSSDVFIARS 354 R L +L A +S + ++ Sbjct: 817 RKETSTTAKALIDLAVEENALDMLTAGVKMSEHTRKWVTKSLEKCHNRELKELVPKGLGI 876 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPL 404 HH + + R + E+ G +R + TS+L G+++ + +I+ T L Sbjct: 877 HHAGLVRSDRNLVEKLFSEGIIRVLCCTSTLAWGVNLPSYCCIIKGTEVYNAEKSTMTEL 936 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTPPH 458 + +Q GRAG Q +G+ +L+ + +E ++L Sbjct: 937 GMLDIMQIFGRAGRPQFDVEGEGVIITSYEVLPRYLNLLKRNLPIESQMT---QDLANHL 993 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP-WKDLPRRVFDATLDMLSGRYPSGDFS 517 VL + L + R+R+ + LP V L G S Sbjct: 994 CAEIVLGTVSNVREGCLWLNYTYLFLRMRQNPMNYGILPEEV--KLDPSLIGMRKSLIEK 1051 Query: 518 AFR-----PKLVWNRETGILTARPGAQL 540 A + ++++ TG+++A ++ Sbjct: 1052 ACKMLQESKMIIYDERTGVVSATDLGRI 1079 >UniRef50_D2A5P4 Putative uncharacterized protein GLEAN_15573 n=2 Tax=Tribolium castaneum RepID=D2A5P4_TRICA Length = 1428 Score = 305 bits (781), Expect = 9e-81, Method: Composition-based stats. Identities = 112/557 (20%), Positives = 201/557 (36%), Gaps = 69/557 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREG 73 P R F K+ +Q + + VA + E+ L+ APTG+GKT A L + ++ Sbjct: 398 LDPTGRLVFKD-IKEFNRIQSEVFPVAYNTNENMLICAPTGAGKTNIALLAIVHQIKAH- 455 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 ++ +I+Y+ P+KAL T++ N L V + V TG Sbjct: 456 --MEGGLIRKDDFKIVYVCPMKALATEMVSNFSKKLA------------PVGIVVKELTG 501 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGA 191 D ++ +L+TTPE ++ A E V+ +I+DEVH + S RG Sbjct: 502 DMQLTKKE---IAETQMLVTTPEKWDVISRKGAVDTEVTSLVKLLILDEVHLLN-SDRGP 557 Query: 192 HLALSLER-LDALLHTS--AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH--PQI 246 + + R L +L + + + LSAT+ DVA FL + + P Sbjct: 558 VIEALVARTLRQVLSSQSIIRIVALSATLPGYLDVANFLKVNPNTGLFFFDNRFRSVPLT 617 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + V N +D + ++ I+ + + +VF SR L Sbjct: 618 MTFIGVKNKND----------------QDAMDLICYNKIIPIIKDGQQVMVFVTSRNLTA 661 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + L L A+ + + S+ ++ HH + + R Sbjct: 662 VVAKNL--LTHAKNNNVLANFIPDKKHRIGKNFKSSELELLVPNGFGVHHAGMCRSDRLE 719 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIGRA 416 E + G L+ +V T++L G+++ A ++I+ + + Q GRA Sbjct: 720 VESLFRVGALKVIVCTTTLAWGVNLPAHAVIIRGTTRYDAQKSSYVDMDMLDIQQIFGRA 779 Query: 417 GH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G Q G+ + L+ S +E F L N+ N VL + Sbjct: 780 GRPQYDTSGHGMIITSVQNMANYMSLLTSQAPIESQF---LNNVPDHLNAEIVLGTVSNL 836 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVF---DATLDMLSGR-YPSGDFSAFRPKLVWN 526 AM+ L Y R+++ L + L + + + + +N Sbjct: 837 KEAMEWLTNTFVYCRIKKNPLVYGLTFTEIWEPEKLFQYLERKLFDAASTLESAQMVRFN 896 Query: 527 RETGILTARPGAQLLAV 543 G L ++ + Sbjct: 897 PTLGELRPTNYGRIASF 913 Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 29/197 (14%) Query: 24 LRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 L +F AVQ Q +H ++ + L+ APTGSGKT+ + + L RLF Sbjct: 1247 LYSFTHFNAVQSQVFHCCFNTDSNVLLGAPTGSGKTIVSEICIL-RLF----------AN 1295 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 R +++YI+P+KAL + + I +V TGD Sbjct: 1296 RPERKVVYIAPMKALVRERVLDWTPKFAKI------------GKKVVEVTGDVTPH---S 1340 Query: 143 LTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 + I+ITTPE M ++ ++ V +IIDE+H +A RG L + + R++ Sbjct: 1341 SLISTSHIIITTPEKWDGMSRNWLQKDFVKQVGLIIIDEIHLLAED-RGPVLEVIVSRMN 1399 Query: 202 ALLHTSAQRIGLSATVR 218 + ++ L+ T+R Sbjct: 1400 YINSIKNAKVKLTKTLR 1416 >UniRef50_B6DMK2 Meiotic crossover 1 n=3 Tax=Oryza sativa RepID=B6DMK2_ORYSJ Length = 1205 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 116/553 (20%), Positives = 210/553 (37%), Gaps = 68/553 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREG 73 P R F F+ ++Q + + S+ + ++ APTGSGKT+ L L L R Sbjct: 19 LPPPFRSVF--GFRYFNSLQSECFPACFLSDVNMVISAPTGSGKTVLFELCILRLLSRFL 76 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + R + T + +YI+P+KAL + R+ + L + + TG Sbjct: 77 SSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSL------------GISCLEMTG 124 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARE----TLRGVETVIIDEVHAVAGSKR 189 D + + D+++TTPE + R+ + V+IDEVH + R Sbjct: 125 DNEFYNTKSI--HDADLILTTPEKFDSVSRHGIRDGGLGFFSDIALVLIDEVHLLND-PR 181 Query: 190 GAHLALSLERLDALLH---------TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 GA L + R+ L + + I +SAT+ + D+A +L Sbjct: 182 GAALEAIVSRIKMLSRLGTMKIAPLANVRFIAVSATIPNIEDIAEWLAVPSEGIKRFGEE 241 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 MR PV V A + R S IL + R +S +VF + Sbjct: 242 MR--------PVKLTTKVFGYAPARNDFLFERRLQSFI----FDILMQHSRGKSALVFCS 289 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHF---ESTSGATSNRVQSSDVFIARSHHG 357 +R A++ L++ ++ +P + + E+ + ++Q+ V H+G Sbjct: 290 TRKGAQEAAQCLSQTASSLGYSNPFMKSMQQYEHLKEAALTCSDKQLQACLVHGVGYHNG 349 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVA 407 + + R++ E G+++ + T++L GI++ A +VI+ + + Sbjct: 350 GLCLKDRSVVEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGLYVEYERS 409 Query: 408 SGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAG--RLENLTPP-----HNP 460 LQ GRAG G TRR+ V + E + G +E+ P N Sbjct: 410 MVLQMCGRAGR-PPFDDTGTIIIMTRRETVH---LYENLLNGCEMVESQLLPCAVEHLNA 465 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 V + A++ L+ Y R+++ + + + L+ Sbjct: 466 EIVQLTVSDITLAIEWLKCSYLYIRIKKNPQHYGIKKEIPRELLEKQMKDICVEKIHELG 525 Query: 521 PK-LVWNRETGIL 532 L+W E G L Sbjct: 526 EYGLIWTDEDGFL 538 >UniRef50_C0QU99 ATP-dependent rna helicase, dead/deah box family n=2 Tax=Aquificales RepID=C0QU99_PERMH Length = 816 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 122/613 (19%), Positives = 223/613 (36%), Gaps = 115/613 (18%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D + + + R + + Q + + ++ +V PT SGK+ L L+RL Sbjct: 28 DFKNEKLKSFLERKDIKLYSHQVEGLNAVKEGKNIVVTTPTASGKSFIYILSILERL--- 84 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + ++ + I P+KAL D + + ET ++ RV + Sbjct: 85 --------KENPETKGIIIFPLKALARDQYGKIMDLI----------LETGIDARVDVYD 126 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLML---TSRARETLRGVETVIIDEVHAVAGSKR 189 GDT ++R ++ ++PP LITTP+ L + + ++ +++DE+HA G Sbjct: 127 GDTDREKRQEIKKDPPTFLITTPDMLNAGILPYHTGWSSFFENLDFIVLDEIHAYRGIL- 185 Query: 190 GAHLALSLERLDALLH----TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 G+H+A + RL + I SATV + S A+ L G+ V + A Sbjct: 186 GSHIANIVRRLKRITGYYRTKKPVFIMNSATVHNPSSFASKLIGEEVVEISRSGA----- 240 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + E I + V+ S+IVF +SR A Sbjct: 241 ------------------PSPEREIQIFRNLRSSETAELIANTVIEDISSIVFVDSRKEA 282 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E L+ R+ ++ + + V + + +R Sbjct: 283 EILSLRVKDILVKKGRDD------------------------LVDKVSPYRSGYTPAERR 318 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E L + + V++TS+LE+GID+G +D I V P ++A QR GRAG + Sbjct: 319 EIEFKLLTKNILAVISTSALEMGIDIGDLDNCILVGYPGTLAQLWQRFGRAGRRDRKAYN 378 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 L R D E + E + P N +L + A+ +++DE Sbjct: 379 ILIPKRNALDQYFVKNPEELFYRKMEEPVINPENRY-ILKKHLPVMASEIPIKLDELSEN 437 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 + A ++L Y G KL +R+ +P + A S Sbjct: 438 EKEVA--REL---------------YKEGIIRFSNNKLYASRQ------KPFSIRSAGES 474 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV-YESRVNDIITLGATSWRIQQITRDQ 604 + E R +G++ E++V YE+ + + ++ + + Sbjct: 475 FRIV--------------ETVSGRVIGDISEDIVLYEAHPGAVYLHNGEKYIVEHLDMEG 520 Query: 605 VIVTPAPGRSARL 617 +V + + Sbjct: 521 KVVYVVHSNISYI 533 >UniRef50_C5LWR0 U520, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LWR0_9ALVE Length = 1979 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 112/519 (21%), Positives = 202/519 (38%), Gaps = 67/519 (12%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS--EHALVIAPTGSGKTLAAFLYAL 66 LP+ PA + F++ AVQ + + VA E+ L+ APTG+GKT A L + Sbjct: 277 EALPEWACPAFKH-----FERLNAVQSKVFPVAYNEFEENLLMCAPTGAGKTNVAMLTIM 331 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + L + ED + +++YI+P+KAL +V ++ + L + L Sbjct: 332 NVLKQYRTEDGFDTS---AFKMVYIAPMKALVQEVVQSFSLRLGDL------------GL 376 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAV 184 V +GD Q S+ +I++TTPE ++ +R V+ +IIDE+H + Sbjct: 377 VVKELSGD---QSLSREQIEQTNIIVTTPEKWDVVTRKAGESRGFTALVKLIIIDEIHLL 433 Query: 185 AGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 + RG L + R + + +GLSAT+ + DVA FL + + Sbjct: 434 HDN-RGPVLEAIVARTLRQIEQTQEHVRLVGLSATLPNYKDVALFLRVNLNRGLFYFGQD 492 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P VP + G R + + + + ++ I+F +S Sbjct: 493 YRP-----VP------LDQTYVGVSSKKAIKRANVMNEVLFEKVEADAGKN-QIIIFVHS 540 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV-----FIARSHH 356 R K L ++ + + A + N ++S D+ + HH Sbjct: 541 RKDTLKTARELRDMAMEKEMLGKFLPESGASRQIIENEIENTIKSPDLGDLLKYGFGIHH 600 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSV 406 +++ R E G ++ +V+T +L G+++ A ++I QV +P LS Sbjct: 601 AGMARVDRTTVEDLFADGHIQVLVSTLTLAWGVNLPAHTVIIKGTQVYSPEKGDWVELSP 660 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 +Q +GRAG Q G+ L ++ + +E L ++ N Sbjct: 661 MDMMQMMGRAGRPQYDTTGHGIVITNRSELQYYLSLNNTQLPIESQMLSALPDMI---NA 717 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRV 499 L A+ L + R+ +A +P Sbjct: 718 EMALGTIASRDDAVRWLGYTYLHVRMMKAPQLYGVPMGD 756 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 110/603 (18%), Positives = 201/603 (33%), Gaps = 92/603 (15%) Query: 1 MADNPDPSSLLPDVFS--------PATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIA 51 + + P + L D+ P F A + +Q QT+ +S+ + L+ A Sbjct: 1109 LPERNPPETELLDLMPLPITALKWPKAEQVFYGATGKLNPIQTQTFTQMFQSDDNTLLCA 1168 Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 P SGK A L L + + R +Y+ P + L L+ Sbjct: 1169 PANSGKLQCAEFAILRML-----------KEYEIKRCVYMCPFERLA-----ELR----- 1207 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETL 170 + + +++ G + V TG+ + + I+IT PE ++ R R+ + Sbjct: 1208 LTEWQKKFGVDGLGCVVTKLTGEASQDLK---LLDSSHIVITIPEHWDMISRRWRTRKPV 1264 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH-------------TSAQRIGLSATV 217 + V I D++H + + GA + + R+ + + IGL+A++ Sbjct: 1265 QQVSLFIADDLHLLNHPRIGATMEACVSRMRYITSNLSAQASESGEAFKPCRIIGLAASI 1324 Query: 218 RSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277 +A+D+ ++G P +R VPV + + S + R Sbjct: 1325 SNANDLGGWMGAPVSSQFNFPTKIR------AVPVKVIIHGYDIYSRNARMAAMTRPTY- 1377 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ----RSPSIAVDAAHF 333 ++ + +VF R + + A L A R S H Sbjct: 1378 ------NLIKANSPSQPVVVFVGDRRQSRMVAADLMLQATADNSPDRFRHLSETAMKEHI 1431 Query: 334 ESTSGATSNRVQSSDVFIARSH-----HGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 E S R + + + H H +S ++R + +SG ++ +V T L G Sbjct: 1432 EGLSKEYGWRTRERGLVTSLMHGIGYMHEGLSNKERDGLMELFESGAVQIMVVTVDLAWG 1491 Query: 389 I-----DMGAVDLVIQV----------ATPLSVASGLQRI---GRAGHQVGGVSKGLFFP 430 + + G +V+ VA ++ + GR G L P Sbjct: 1492 LLPQTHNAGCRMVVVMDTVKYDARQRRYVDYDVADVVEMMSIAGRPGIDDHATC-ALLCP 1550 Query: 431 RTRRDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 T++D + +L+ LT N V A+D L +Y R+ R Sbjct: 1551 TTKKDYYKKFIYEPMPVESQLDQKLTDHLNAEVVSGTIENKQDAVDWLTWTFFYRRITRN 1610 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL---LAVTSG 546 + L D LS S + + + E I + + T Sbjct: 1611 PNYYSLQGVSPQEISDFLSEIIESTSDALAQTGCIEIGEDEITLSSTNLGMVAAYYYTRP 1670 Query: 547 GTI 549 TI Sbjct: 1671 STI 1673 >UniRef50_O73946 Putative ski2-type helicase n=3 Tax=Pyrococcus RepID=HELS_PYRFU Length = 720 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 108/508 (21%), Positives = 199/508 (39%), Gaps = 66/508 (12%) Query: 24 LRAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 R + Q + ++AL+ PT SGKTL A + + R+ +GG Sbjct: 18 ERGIESFYPPQAEALKSGILEGKNALISIPTASGKTLIAEIAMVHRILTQGG-------- 69 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 + +YI P+KAL + + Q ++ LRV + TGD +++ Sbjct: 70 ----KAVYIVPLKALAEEKFQEFQDW-------------EKIGLRVAMATGDYDSKDE-- 110 Query: 143 LTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 DI+I T E +L ++ V+ ++ DE+H + RGA L + L + Sbjct: 111 -WLGKYDIIIATAEKFDSLL-RHGSSWIKDVKILVADEIHLIGSRDRGATLEVILAHML- 167 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 AQ IGLSAT+ + ++A +L + V+ P +R V Sbjct: 168 ---GKAQIIGLSATIGNPEELAEWLNAELIVSDWRPVKLRRG-------------VFYQG 211 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 T ED R + E + D + + + ++F N R AE++ L++ + L + Sbjct: 212 FVTWEDGSIDR----FSSWEELVYDAIRKKKGALIFVNMRRKAERVALELSKKVKSLLTK 267 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 A++ T+ ++ + HH + +++R + E+ + G ++ VVAT Sbjct: 268 PEIRALNELADSLEENPTNEKLAKAIRGGVAFHHAGLGRDERVLVEENFRKGIIKAVVAT 327 Query: 383 SSLELGIDMGAVDLVIQVATPLS--------VASGLQRIGRAGH-QVGGVSKGLFFPRTR 433 +L GI+ A ++I+ S + Q +GRAG + V +G+ T Sbjct: 328 PTLSAGINTPAFRVIIRDIWRYSDFGMERIPIIEVHQMLGRAGRPKYDEVGEGIIV-STS 386 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL-QVDEWYSRVRRA-AP 491 D + V+ +F G+ E L + L Q +A A V+E + Sbjct: 387 DDPRE--VMNHYIF-GKPEKLFSQLSNESNLRSQVLALIATFGYSTVEEILKFISNTFYA 443 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAF 519 ++ + + + +F Sbjct: 444 YQRKDTYSLEEKIRNILYFLLENEFIEI 471 >UniRef50_B4N718 GK23638 n=1 Tax=Drosophila willistoni RepID=B4N718_DROWI Length = 1808 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 96/432 (22%), Positives = 167/432 (38%), Gaps = 54/432 (12%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 P LP P + FK +Q + + A S E+ L+ APTG+GKT A L Sbjct: 470 QPIDKLPKYVQPV-----FQGFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLT 524 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 + + + ED + +I+Y++P+K+L ++ N L Sbjct: 525 MMREIGKHINEDG--TINSQDFKIIYVAPMKSLVQEMVGNFGRRLA------------CY 570 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHA 183 NL V TGD + ++ +++ TPE ++ R + V VIIDE+H Sbjct: 571 NLVVSELTGD---HQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHL 627 Query: 184 VAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + +RG L + R + T + +GLSAT+ + DVAAFL + Sbjct: 628 LHD-ERGPVLEALVARTIRQIETTQEEVRLVGLSATLPNYQDVAAFLRVKPDKGLFYFDN 686 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + G E R + + ++ R+ +VF + Sbjct: 687 SYRPV-----------SLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRN-QVLVFVH 734 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHH 356 SR K + ++ + + +A E + ++ + HH Sbjct: 735 SRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNTELKELLPYGFAIHH 794 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSV 406 +S+ R + E ++ +V+T++L G+++ A ++I QV P LS Sbjct: 795 AGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSA 854 Query: 407 ASGLQRIGRAGH 418 LQ +GRAG Sbjct: 855 LDVLQMLGRAGR 866 Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats. Identities = 114/600 (19%), Positives = 209/600 (34%), Gaps = 71/600 (11%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P S L P ++ + F Q +Q Q ++ S E+ V APTGSGK A Sbjct: 972 PLPISAL---RQPKFESFYNQKFAQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEF 1028 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + RLF + R +Y+ +AL V + + Sbjct: 1029 AIM-RLFTNQADG----------RCVYLVSQEALADSVFADWHSKFSAL----------- 1066 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVH 182 +++V TG+T + ++ITT + ++ + R+ ++ V I+DE+ Sbjct: 1067 -DIKVVKLTGETGTDLK---LIAKGQLIITTADKWDVLSRRWKQRKNVQLVNLFIVDELQ 1122 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 V G G L + R+ + + + + LSA++ A DVA +LG + T P Sbjct: 1123 LVGGED-GPVLEIVCSRMRYISSQIEKQIRIMALSASLTDARDVAQWLGCNPNATFNFHP 1181 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 ++R + + + G +A R ++ + IL + H+ IVF Sbjct: 1182 SVRPIPLELHI------------QGFNVTHNATRIATMSKPVYNSIL-KWSAHKPVIVFV 1228 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGS 358 +SR A + A+ LQ + + + T ++ + H Sbjct: 1229 SSRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIQPFLERITDKTLKETLAQGVAYLHEG 1288 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI----------QVATPLSVAS 408 ++ + EQ SG ++ V + L G+ + A +I + Sbjct: 1289 LTASDHRLVEQLFDSGAIQVAVVSRDLCWGMSISAHLAIIMDTQFYNGKNHSYEDYPITD 1348 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPR-TRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLA 465 LQ IGRA +K + + +++D + L++ + N V Sbjct: 1349 VLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTK 1408 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG--RYPSGDFSAFRPKL 523 A+D L Y R+ + + +L D LS D + Sbjct: 1409 TIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCIS 1468 Query: 524 VWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV----GELDEEMV 579 V + + + TI ++S+ L + G + E +E MV Sbjct: 1469 VEDDMDTLPLNLGMIAAYYYINYTTI---ELFSLSLNSKTKVRGLLEIISSAAEYEEVMV 1525 >UniRef50_A1DP28 DEAD/DEAH box DNA helicase (Mer3), putative n=7 Tax=Trichocomaceae RepID=A1DP28_NEOFI Length = 1449 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 117/530 (22%), Positives = 203/530 (38%), Gaps = 65/530 (12%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRL 69 LPD + R F F AVQ + + +++ + ++ APTGSGKT+ L A+ RL Sbjct: 231 LPDSY----RSIFH--FPVFNAVQSKCFQRVYKTDDNIVLAAPTGSGKTVIMEL-AICRL 283 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 K + +++Y +P K+L ++ R+ + L+ Sbjct: 284 LS--------TLKDERFKVVYQAPTKSLCSERFRDWNRKF------------MSLGLQCA 323 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAG 186 TGDT + + I++TTPE M T + ++ ++ V+ +IDE+H + Sbjct: 324 ELTGDTDHTQLRSV--QNSQIIVTTPEKWDSM-TRKWKDHARLMQLVKLFLIDEIHILKE 380 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 + RGA L + R+ ++ + + LSATV ++ D+A++LG D T + PA R Sbjct: 381 A-RGATLEAVVSRMKTF-GSNVRFVALSATVPNSEDIASWLGKD--ATNQHVPAHREHFG 436 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 PV V S + + + S P IL + ++F +R Sbjct: 437 EDFRPVKLQKFVYGYQSHSNDFAFDKLCSSKLP----DILGTHSCRKPIMIFCCTRNSCV 492 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L L++ + V H E+ + + + F HH + R Sbjct: 493 ATAKELARLWSMTNPPARLWKVSGKHLEAHNADLRTTLMAGVAF----HHAGLDPADRHT 548 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAGH 418 E G + + TS+L +G+++ ++I+ S +Q +GRAG Sbjct: 549 VESGYLQGHVAVICCTSTLAVGVNLPCHLVIIKGTVGWQDGGCKEYSDLEMMQMLGRAGR 608 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAG--RLE-----NLTPPHNPLDVLAQQTVAA 471 S + TR+D V E + +G LE NL N L T Sbjct: 609 PQFDDS-AIAVIMTRKDRVQHY---EKLVSGCETLESCLHLNLIDHLNAEIGLGTVTDVD 664 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 +A+ L + R+RR L D + + D + Sbjct: 665 SAVRWLAGTFLFVRLRRNPKHYQLKEGATKDDEDEMLRQICEKDIRLLQE 714 >UniRef50_Q4UHC2 DEAD-box helicase, putative n=2 Tax=Theileria RepID=Q4UHC2_THEAN Length = 1925 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 120/571 (21%), Positives = 216/571 (37%), Gaps = 78/571 (13%) Query: 5 PDPSSLLPDVFSPATRDWFLRAF---KQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLA 60 P L+P P +W RAF ++ +Q + ++ A ++ + L+ APTG GKT Sbjct: 245 PSEDELIPISTLP---EWVQRAFIGVEKLNLIQSKVFNSAFNTQQNLLISAPTGCGKTNV 301 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 L L +K +++YISP+KAL +++ L Sbjct: 302 GLLCLLQ------NYREYFEQGKKCGKVIYISPMKALASEIVEKYSKSLA---------- 345 Query: 121 ETEVNLRVGIRTGD--TPAQERSKLTRNPPDILITTPESLYLML-------TSRARETLR 171 L V TGD P E ++ DIL+TTPE ++ T L Sbjct: 346 --HSGLVVREVTGDFQVPKSELEEI-----DILVTTPEKCDVVTRNSFSTATQSDDSFLT 398 Query: 172 GVETVIIDEVHAVAGSKRGAHLALS---LERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 V +I DE+H + +RG + RL + + +G+SAT+ + D+A FL Sbjct: 399 RVNLIIFDEIHLLND-ERGPVIETIAARFFRLIEWTQVTRRVVGMSATLPNYEDIATFLR 457 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDE 288 T RH ++ + DD+ + ++ I++ Sbjct: 458 VPPEHTYYFGREYRHVPLQQIFYGIKNDDIY--------------KNNMLMICFDHIVET 503 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT--SNRVQS 346 + + +VF +SR +R+ EL + ++S D + + S N ++ Sbjct: 504 LESGKQCMVFVHSRNETFTTASRIVEL-VNKSEKSELFEPDLSQVKRFSAQLMRRNNLKL 562 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 + HH +SK R + E+ KSG ++ +V TS+L G+++ A ++I+ V Sbjct: 563 LSDYSISIHHAGLSKSDRDLVEEMFKSGLIKVLVCTSTLAWGVNLPAHSVIIKGTFIGGV 622 Query: 407 --------ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD------SAVIVECMFAGRLE 452 Q +GRAG V ++L + V +E LE Sbjct: 623 GVDRNINNLELNQIMGRAGRPQFDVEGKGILLTDHKNLYNYVRMQTERVPIESQLHMHLE 682 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 N N + A+ LQ + R+ + + + D L Sbjct: 683 NFL---NAEIAIGSINNDTDALLWLQYTYLFVRMVKNPLFYGINGDDDDTLLKYRHEIIK 739 Query: 513 SGDFSAFRPKLV-WNRETGILTARPGAQLLA 542 + + + KL+ ++ +TG ++ ++ A Sbjct: 740 NAAKNLNKSKLIRYSSKTGDFSSTDLGRIAA 770 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 113/538 (21%), Positives = 204/538 (37%), Gaps = 92/538 (17%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAF 62 NP P+S+L + + F +Q Q +H A R+ E +V APTGSGKTL A Sbjct: 1113 NPLPTSVLN--------QYNVYKFPYFNPLQTQVFHKAFRTDESLVVAAPTGSGKTLVAE 1164 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L RLF K +YI+P+KAL + ++ L + Sbjct: 1165 LG-LFRLF----------DKHPDKIAVYIAPLKALAHERFKDWCKKLHFKKILQ------ 1207 Query: 123 EVNLRVGIRTGDTPAQ---------ERSKLTRNPPDILITTPESLY-LMLTSRARETLRG 172 TGDT + ER +L R DI+ITTPE + R ++ + Sbjct: 1208 --------LTGDTSSNNLDNQLYKFERDELDR--YDIVITTPEKWDGISRHWRRKKLVTK 1257 Query: 173 VETVIIDEVHAVAGSKRGAHLALSLER---LDALLHTSAQRIGLSATVRSASDVAAFLGG 229 V +I+DE+H + G RGA + + R ++ + I LS ++ + ++++ ++G Sbjct: 1258 VALIILDELHLL-GESRGAIIESIISRQYTINHSTGAQVRYICLSTSLSNLNEISEWIGI 1316 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 P + P + G ++ R S+ I+ + Sbjct: 1317 --------------PNVYNFSPAVRPVKCNLYIDGFSIKAYCPRMNSMNKPCFDTII-KH 1361 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV 349 + ++F +SR L L + ++ + + Sbjct: 1362 DHSSNVLIFVSSRRQTRMTAQDLVGLLQFH-------NISFSNSCDNYFFDDEWLNTFVP 1414 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV--------- 400 HH +S + R + + +G+L+ ++ATS+L G+++ A ++I+ Sbjct: 1415 HGIGIHHAGLSTKDRELVQDLFLNGKLKVLIATSTLAWGVNLPAKIVIIKGTEFYDGRVK 1474 Query: 401 -ATPLSVASGLQRIGRAGHQV-GGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLEN 453 S +Q +GRAG + G + F TR + + + E F LE Sbjct: 1475 KYIDYSATDIIQMVGRAGRNIYDGEAYAYVFTETRKVGFYKAFMFTPFPTESFF---LEK 1531 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL-PRRVFDATLDMLSGR 510 + N T +A++ L Y R++ + P +++ D+L+ Sbjct: 1532 INDCLNSEIATGSVTTKKSALEYLSRTFLYKRLKSNPKYYTQAPNMLYEDKGDVLNDG 1589 >UniRef50_B8N1Z3 DEAD/DEAH box DNA helicase (Mer3), putative n=2 Tax=Eurotiomycetidae RepID=B8N1Z3_ASPFN Length = 795 Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats. Identities = 112/519 (21%), Positives = 196/519 (37%), Gaps = 66/519 (12%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRL 69 LPD + F A+Q + + + + + ++ APTGSGKT+ L A+ RL Sbjct: 16 LPDKYGSLF------HFPAFNAIQSKCFQSVYKGDDNIVLAAPTGSGKTVVMEL-AICRL 68 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 K + +++Y +P K+L ++ R+ + L+ Sbjct: 69 LNN--------LKDERFKVIYQAPTKSLCSERFRDWNRKFHSL------------GLQCA 108 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAG 186 TGDT + + I+ITTPE + T + ++ ++ V+ +IDEVH + Sbjct: 109 ELTGDTDYTQMRSV--QNSQIIITTPEKWDSV-TRKWKDHARLMQLVKLFLIDEVHILKE 165 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 S RGA L + R+ + ++ + + LSAT+ ++ D+A +LG D T + PA R Sbjct: 166 S-RGATLEAVVSRMKTI-GSNVRFVALSATIPNSEDIATWLGKD--ATNQHVPAHREHFG 221 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 PV V S + + S P IL + ++F +R + Sbjct: 222 EEFRPVRLQRFVYGYQSQGNDFAFDKMCSSKLP----DILAMHSCRKPIMIFCCTRNSSV 277 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L L++ + + FE + D+ HH ++ R Sbjct: 278 ATAKELARLWSMSNPPARLWKGPSKSFEFNN---------IDLKSVAFHHAGLNPGDRQT 328 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAGH 418 E G++ + TS+L +G+++ ++I+ S +Q +GRAG Sbjct: 329 IENGFLQGQINIICCTSTLAVGVNLPCHLVIIKNTVGWLDGGCKEYSDLEIMQMLGRAGR 388 Query: 419 -QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMD 475 Q + + R R D + V L NL N L T +A+ Sbjct: 389 PQFDKDAVAVILTRKERVDYYERLVSGSESLESCLHLNLIDHLNAEIGLGNVTSVESAIR 448 Query: 476 ALQVDEWYSRVRRAAPWKDL----PRRVFDATLDMLSGR 510 L + R+RR L R D L + + Sbjct: 449 WLAGTFLFVRLRRNPTHYQLREGAKREDEDEMLRQICEK 487 >UniRef50_A6LY55 DEAD/DEAH box helicase domain protein n=2 Tax=Clostridiales RepID=A6LY55_CLOB8 Length = 887 Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats. Identities = 131/584 (22%), Positives = 218/584 (37%), Gaps = 90/584 (15%) Query: 11 LPDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 P S ++ + + + Q + + A + ++ T SGKTL+ L + + Sbjct: 23 YPSNLSEELCEYLSQKGIDKLYSHQAEMFEKAMDRNNIVITTSTASGKTLSFLLPVIQEI 82 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 +R ++I P KAL +D R + L+ R + G Sbjct: 83 LS-----------NPLARAIFIYPTKALASDQYRAILPYLEYFGSNR---------ISAG 122 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET-----LRGVETVIIDEVHAV 184 + GDTP ERS++ +N +I++T PE + + ++ ++IDE+H Sbjct: 123 VYDGDTPVNERSRIRKN-ANIILTNPEMINAAFLPNHSKFGFDFIFSNLKYIVIDELHTY 181 Query: 185 AGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTV-VNPPA 240 G+ G+HLA RL + +S Q + SAT+ + ++A + G + + V ++ Sbjct: 182 RGA-FGSHLANVFRRLGRVCRYYNSSPQYLCSSATIANPVELAEEICGHKFLEVCMDGSP 240 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 ++V P M G D + I D V S I F Sbjct: 241 APKKNYKLVQPPKIM----------GHDKKYYGQVQSTSVAADLIPDLVENDNSFIAFAK 290 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SR E + + T N +S + G + Sbjct: 291 SRRNVEVVLKEARDKL----------------------ETENFFGASLKDKISGYRGGYT 328 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 +R E + +G LR +V+T++LELGID+G +D + V P + AS Q+ GRAG Sbjct: 329 PLERKEIENKMITGVLRGLVSTNALELGIDIGKIDTTVIVGYPGTRASFWQQSGRAGRNG 388 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 + L D A+ + +F EN N L + AAAA L +D Sbjct: 389 KESTNYLILDNLPFDQY-IAINPDWLFESGSENAVIDKNNLLIELAHIRAAAAEIPLTLD 447 Query: 481 EWYSRVRRAAPWKDL----PRRVFDATLDMLSGR-------YPSGDFS-----AFRPKLV 524 + + + DL P + + L SG+ +P+GDFS R KL+ Sbjct: 448 DI-------SIFPDLGETIPVLIRASELTNQSGKFAWCGNSFPAGDFSLRNIDKARYKLI 500 Query: 525 WNRETGILTARPGAQLLAVTSGGTI--PDRGMYSVLLPEGEEKA 566 +T Q G I D Y V+ + E + Sbjct: 501 NKDNNKEITEMDEMQAFREIHNGAIYMHDGVQYQVVKLDLESRT 544 >UniRef50_C4QQ45 U520, putative n=5 Tax=Bilateria RepID=C4QQ45_SCHMA Length = 2211 Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats. Identities = 115/610 (18%), Positives = 215/610 (35%), Gaps = 91/610 (14%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 PA K +Q + +H A + E+ L+ APTG+GKT A L + L + Sbjct: 480 PAYAQAAFEGCKTLNLIQSRLYHAAMETDENLLLCAPTGAGKTNVALLCIMHELGKFINP 539 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 D + +++YI+P+++L +V N L + ++V TGD Sbjct: 540 DG--TINKDEFKLIYIAPMRSLVQEVVGNFNKLL------------SSYGIKVDELTGD- 584 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHL 193 + S+ +++ TPE ++ R ++ V +I DE+H + RG L Sbjct: 585 --HQLSREQIYETQVIVCTPEKWDVITRRGGDERAYIQLVRLIIFDEIHLLHDD-RGPIL 641 Query: 194 ALSLERLDALLHTSAQRIGL-----------------SATVRSASDVAAFLGGDRPVTVV 236 + R + +++ GL SAT+ + DVA FL D + Sbjct: 642 EAIVARTLRAVESTS---GLAVSNDIGGGGGVRLVGLSATLPNYEDVATFLRVDCSKGLF 698 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 + P VP+ G E R + + +++ R+ + Sbjct: 699 HFDNSYRP-----VPLEQQ------YIGITEKKAVKRYQIMNDIVYDKVMEHAGRN-QIL 746 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF----ESTSGATSNRVQSSDVFIA 352 +F +SR K L + + + A + ++ ++ + Sbjct: 747 IFVHSRKETGKTARTLRDACLEKDTLGIFMKEKNASAVVLRQEAEQVKNSELKDLLPYGF 806 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP------ 403 HH +S+ R + E ++ +V+T++L G+++ A ++I Q+ +P Sbjct: 807 GIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVLIKGTQIYSPEKGRWT 866 Query: 404 -LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTP 456 L +Q +GRAG Q +G+ L++ + +E RL +L Sbjct: 867 ELGALDVMQMLGRAGRPQYDTKGEGILITNHTELQYYLSLMNQQLPIESQLVSRLADLL- 925 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 N VL T A+ L Y R+ R +P+ Sbjct: 926 --NAEIVLGTVTTIREAVTWLGYTYLYIRMLRNPTLYGVPQG----------SEKDDPWL 973 Query: 517 SAFRPKLVW-----NRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 +R LV + ++ + L T G I + K + Sbjct: 974 EQYRRDLVHTAAIELERSQLIRYDRRSGCLQSTELGRIASHYYLTHTTVLSYNKLLRPGL 1033 Query: 572 GELDEEMVYE 581 GE++ V+ Sbjct: 1034 GEIELFRVFA 1043 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 108/560 (19%), Positives = 206/560 (36%), Gaps = 60/560 (10%) Query: 23 FLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAH 81 + K +Q Q ++ S E+ L+ APTGSGKT+ A L + + Sbjct: 1345 YTDRIKVFNPIQTQVFNSLYNSDENVLIAAPTGSGKTVCAELTIFRLITTHNSSTNQSDS 1404 Query: 82 KRKTS--RILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 T+ R +Y+ P + + + D R GE ++ RV TG+T Sbjct: 1405 SGTTANFRCIYVLP---------PHEEQVEQRYIDWASRFGE-KLGKRVVRLTGETSVDL 1454 Query: 140 RSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLE 198 + +I++TTPE ++ + R+ ++ V I D +H V GS+ G+ L + Sbjct: 1455 K---LLARGNIIVTTPEHWDVLSRRWKQRKNVQNVNLFIADNLHLV-GSEGGSVLEVVCS 1510 Query: 199 RLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV-PVAN 254 R+ + + + IGLS ++ + D+A++LG T PPA R + + + P Sbjct: 1511 RMRYISSQVDNPIRIIGLSHSLTNGRDIASWLGCTSGATYNFPPATRPIPLELTIMPFNI 1570 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 S + + T + P + + + T+V+ +R A++ L Sbjct: 1571 PHQASRLLAMTKPVYQLITRLAFTP--SPAGSSQHSQRKPTLVYVPTRRQAQRAALDLIT 1628 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS--------VSKEQRAI 366 ++A S + + E+ S A + + R HG +SK R + Sbjct: 1629 MFAVSNATSKFQTISSHLEEALSRAADQLADRALAEVIR--HGGGVAYLHEAISKPDRRL 1686 Query: 367 TEQALKSGELRCVVATSSLELG--------------IDMGAVDLVIQVATPLSVASGLQR 412 E +G L +V + +L +D + I + ++ Sbjct: 1687 IEVLFAAGALHTLVVSRALVWAAASPNPLTAYLVIVMDTQDYNGKIHAYEDYPIVDLIEM 1746 Query: 413 IGRAGH-QVGGVSKGLFFPRT-RRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLAQQTV 469 +G A + +K + +T +++ + + L++ L N V Sbjct: 1747 LGHANRPNIDSEAKAVVLCQTGKKEFLKKFLHDPLPVESHLDHALHDHFNAEIVTKTIEN 1806 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 A+D L Y R+ + + +L ++ R+ S S + + ET Sbjct: 1807 KQDAVDYLTWTFLYQRMTQNPNYYNL---------QGVTHRHLSDHLSELVETTLNDLET 1857 Query: 530 GILTARPGAQLLAVTSGGTI 549 + LA + G I Sbjct: 1858 SKCISIEDGIDLAPLNLGMI 1877 >UniRef50_UPI00006CB1FA Type III restriction enzyme, res subunit family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB1FA Length = 2279 Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats. Identities = 123/594 (20%), Positives = 217/594 (36%), Gaps = 67/594 (11%) Query: 18 ATRDWFLRAF-------KQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRL 69 A +W + F K+ +Q + A R+E+ LV APTG+GKT A L L+ + Sbjct: 541 ALPEWAQKPFVDKEVNIKEFNPIQSAVFDCAFNRTENMLVCAPTGAGKTNIALLAILNVI 600 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + D R +I+Y++P+KAL ++ LK + V Sbjct: 601 GKY--IDRRGVVNLNKFKIVYLAPMKALVGEMVLTFTQRLKYY------------GITVR 646 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSK 188 TGD + SK + ++I TPE ++ R V +IIDE+H + + Sbjct: 647 ELTGD---SQLSKEQIDSTQLIIATPEKWDIITRKAGDRTYTELVRLLIIDEIHLLHD-Q 702 Query: 189 RGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RG L + R + + + +GLSAT+ + +DV FL +P+ Sbjct: 703 RGPVLEALVARTIRMTEQTQENVRIVGLSATLPNFADVQNFLRV-KPLNKKENTGGMFFF 761 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV G E A R + + + + +F +SR Sbjct: 762 DHTYRPVPLQQSFI----GISEKKAAKRMLLTNEILYQKVEQRASKDQPLFIFVHSRRDT 817 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN----RVQSSDVFIARSHHGSVSK 361 K L + + + + + E A N ++ V HH +S+ Sbjct: 818 VKTANFLRQQAYQMNELNKFVEEGSNAEEILKKAAENIQNKDLKEMIVQGFAVHHAGLSR 877 Query: 362 EQRAITEQALKSGE----LRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVA 407 + R I E ++ +V T++L G++M A ++I QV +P LS Sbjct: 878 DDRDIVENLFFQNRYQKTIKVLVCTATLAWGVNMPASCVIIKGTQVYSPELGKWTELSPQ 937 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPL 461 +Q +GRAG + + + L++ + +E F + L N Sbjct: 938 DMIQMVGRAGRPGFDLRGESIVITSFQEKNYYLSLLNQQLPIESQF---ISQLPDQLNAE 994 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 VL + A+D L Y R+ R+ + ++ D L ++ + + Sbjct: 995 IVLGTVSNIKEAVDWLGYTYLYIRMLRSPKVYHISDEEYEN--DRLLVKHRANLIHSAAT 1052 Query: 522 KLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELD 575 L + G++ + TS G I E K + +G ++ Sbjct: 1053 LL---DKYGLIKYDKKTGIFQSTSLGKISSHYYIKYPSMEIYNKHLKQNMGVIE 1103 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 87/574 (15%), Positives = 192/574 (33%), Gaps = 88/574 (15%) Query: 26 AFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +Q Q + +SE+ + APTGSGKT + L R+F+ E+ Sbjct: 1438 GITTFNKIQTQVLNQFYSQSENIFLGAPTGSGKTACIIVAML-RIFKTYYENK------- 1489 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +++Y++P +++ ++ + K + +V I TG T Sbjct: 1490 --KVIYVAPFESICQNMYKLFSKAFKHL------------GKKVAILTGQTKTDN---QI 1532 Query: 145 RNPPDILITTPESLYLMLTSRARETL----RGVETVIIDEVHAVAGSKRGAHLALSLERL 200 DI+I+TPE+ + T + ++T + ++ I DE+H + + + + R+ Sbjct: 1533 FTKYDIIISTPENWD-INTRKWKKTQQIINKNIKLFIADELHMLNECN--STYEVIVSRM 1589 Query: 201 DAL-----------------LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 ++ + Q IGL+ +V ++A+++G + T P +R Sbjct: 1590 RQFSSLLSSKSEGKQEGKKEVNHNFQIIGLATSVADYKEMASWIGANPSNTFNFSPDVRP 1649 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI-LDEVLRHRSTIVFTNSR 302 + + + +G + R S+ ++ G+ L + I+F + R Sbjct: 1650 YPVDLHI------------TGFEQHHRKARLISMQKHMYQGLKLFLKSPQQQGIIFVSDR 1697 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN-RVQSSDVFIARSHHGSVSK 361 A+ L L A + V + + + ++ S + + +S+ Sbjct: 1698 KQAKITAIDLQTLAAGDNNPQKFLKVPYDSIQEIVESLRDLSLRQSLKYGVGFIYEGMSE 1757 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQ 411 ++R + E +SG ++ +++T L +++ + ++I ++ LQ Sbjct: 1758 QEREVVESLYQSGAIQVLISTYKLCWELNLHSQVVIILDNQRYDGREKRYIDYTIPDMLQ 1817 Query: 412 RIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNP-LDVL----AQ 466 I +K V + P +L Sbjct: 1818 MI--------AYAKSKNASAQNAQAAKCLVFCHSPKKEYYKKFLFEPFPVESILSENITN 1869 Query: 467 QTVAAAAMDALQ-VDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW 525 + + + ++ L + + L +SG + K + Sbjct: 1870 HICGEIYAERITSLPACIDWSTWTFMYRRLSQNPYFYGLREVSGPAINDFLCDLFEKAIE 1929 Query: 526 NRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 LA+ S G+I V Sbjct: 1930 YLIEYKCVKELEQHNLALLSLGSIAGYYYIDVQT 1963 >UniRef50_B0EE60 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative n=2 Tax=Entamoeba RepID=B0EE60_ENTDI Length = 1799 Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats. Identities = 111/569 (19%), Positives = 210/569 (36%), Gaps = 79/569 (13%) Query: 21 DWFLRAF---KQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGED 76 +W R+ K +Q + ++ + LV APTG+GKT A L L + Sbjct: 439 EWAQRSLTPLKYLNRMQSTVYPTVFETDDNVLVCAPTGAGKTTVALLTILHEV------- 491 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 + + +I+YI+P+K+L ++ LQ L+ + ++V +GD+ Sbjct: 492 KKAKETHEQFKIIYIAPMKSLVQEIVGTLQGKLENL------------GMKVAEMSGDSS 539 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTS-------RARETLRGVETVIIDEVHAVAGSKR 189 ++ D+++ TPE + ++ ++ +IIDEVH + + R Sbjct: 540 LTKKE---LEETDVIVATPEKIDVITRKIGGLGSGCGHGIFEYLKVMIIDEVHLLHDT-R 595 Query: 190 GAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 G L + R+ + ++ + +GLSAT+ + DV FL + V R Sbjct: 596 GPVLEALVARIKLFMESNSKYIRLVGLSATLPNCGDVGIFLNCKKENVFVFGSEYR---- 651 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 PV VA D ++ I + + E + ++F +SR Sbjct: 652 ----PVPLQQTFFGVA-----DKKPLKQVQIMNRLTFQKVKESAGKQQVLIFVHSRKDTL 702 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGSVSKE 362 + + E+ + A E + ++ HH ++KE Sbjct: 703 ETAKYIKEMALQENCLHSFLQNRRASQEVLLSEAKKFDNEELKELIGVGIGIHHAGMNKE 762 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQR 412 R + E L+ +V+T++L G+++ A ++I Q+ +P LS +Q Sbjct: 763 DRRLIEDLYADNHLQVLVSTATLAWGVNLPAHTVIIKGTQIYSPPTGRWEELSPMDVMQM 822 Query: 413 IGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 IGRAG Q G+ R L+ + +E F G L N V+ Sbjct: 823 IGRAGRPQFDKEGTGIIITTQREMFFYMSLLSQQLPIESQFIGSL---VDNLNAEVVIGN 879 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--DATLDMLSGR--YPSGDFSAFRPK 522 + L + +Y + R+ L F D TL+ + + Sbjct: 880 IKNIDDGIKWLTMTYYYICILRSPLLYGLQPNDFTNDPTLESRRRDLIHTAASLLHANGL 939 Query: 523 LVWNRETGILTARPGAQL--LAVTSGGTI 549 ++++ G + A ++ + TI Sbjct: 940 AIYDKRKGTINATELGRISSYYYLTTETI 968 Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats. Identities = 43/370 (11%), Positives = 119/370 (32%), Gaps = 59/370 (15%) Query: 26 AFKQPTAVQPQTWHVAARSEHAL-VIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +F A+Q Q + + ++L + + +GSGKT+ A + L + G+ Sbjct: 1294 SFDLFNALQTQLYQAVVETNNSLYIASHSGSGKTVIAEMGLLKHIQEHNGKG-------- 1345 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +Y+ P D +R+L ++ V + T +E + Sbjct: 1346 ---AIYVMPF-----DEERDL-----------LYLEMKNQSISVEMM--KTDNKEVEEQL 1384 Query: 145 RNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR---GAHLALSLERLD 201 +N +++ S++ L R+ + + + + +R + + R+ Sbjct: 1385 KN-VQVILA---SVHN-LERYLRDWKQNGNIIRSIGIIILDDLQRVGEDVEYEMLISRIK 1439 Query: 202 AL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 + + + IGLS + + + +LG + R I + + + + Sbjct: 1440 TIQKEYQNNIRIIGLSLPISDSKSMREWLGVTQNNCYSFSMKSRVYPINVQIEIMKQTE- 1498 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL------ 312 ++ R ++ + + +++ +++ S+ L + Sbjct: 1499 -----------YSMRLQAMIQPTIELLFNYWKQNKKSVITVPSKKLLLNTVQQFILLLQK 1547 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 N++ Q + + +E++ + + + Sbjct: 1548 NKIIQFNNQGRVEPKSEIEEIIKQYKIKNEIAIQGICSGIGIIFNGEDEEEKIVIKNLFR 1607 Query: 373 SGELRCVVAT 382 G ++ + T Sbjct: 1608 EGIIKTIFLT 1617 >UniRef50_B6YXM0 DNA helicase n=5 Tax=Thermococcus RepID=B6YXM0_THEON Length = 726 Score = 302 bits (773), Expect = 9e-80, Method: Composition-based stats. Identities = 107/487 (21%), Positives = 189/487 (38%), Gaps = 68/487 (13%) Query: 20 RDWFLRAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 R R ++ Q + ++ ++ PT SGKTL + + +++L REGG Sbjct: 14 RIILERGIEELYPPQAEALRSGVLEGKNLVLAIPTASGKTLVSEIVMVNKLLREGG---- 69 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 + +Y+ P+KAL + R + + LRV TGD + Sbjct: 70 --------KAVYLVPLKALAEEKYREFKEW-------------EVLGLRVAATTGDYDST 108 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLE 198 + DI++ T E +L ++ V+ V+ DEVH + RGA L + L Sbjct: 109 DE---WLGRYDIIVATAEKFDSLL-RHGSSWIKDVKLVVADEVHLIGSYDRGATLEMILS 164 Query: 199 RLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 + AQ + LSATV +A ++A +L + V+ P +R V Sbjct: 165 HML----GRAQILALSATVGNAEELAEWLNAELVVSNWRPVQLRKG-------------V 207 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 + ED R + W + +D V R + ++F N+R AEK L A Sbjct: 208 FAQGELFWEDGKIDRYPANWDSLA---IDAVKRGKQALIFVNTRRSAEKEAVSLAPKIAR 264 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 L + + S T+ +++ + HH +S+ +R + E A + G ++ Sbjct: 265 LLTKPEQRGLKELADSLESNPTNEKLKKALRGGVAFHHAGLSRTERTMIEDAFREGLIKV 324 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLS--------VASGLQRIGRAGH-QVGGVSKGLFF 429 + AT +L G+++ A ++I+ S V Q +GRAG + V + + Sbjct: 325 ITATPTLSAGLNLPAFRVIIRDTKRYSNFGWVDIPVLEIQQMMGRAGRPKYDKVGEAIIV 384 Query: 430 PRTRR--DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV-DEWYSRV 486 RT L+D V G+ E L Q +A ++ E + + Sbjct: 385 ARTEDPKKLMDRYVF------GKPEKLFSMLANESAFRGQILALITNFGVENFRELINFL 438 Query: 487 RRAAPWK 493 + + Sbjct: 439 EKTFYFY 445 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Ent... 1725 0.0 UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Coryne... 1539 0.0 UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteoba... 1534 0.0 UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinom... 1532 0.0 UniRef50_C8NN73 ATP-dependent helicase n=12 Tax=Corynebacterium ... 1531 0.0 UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomyceta... 1526 0.0 UniRef50_Q5Z170 Putative ATP-dependent DNA helicase n=3 Tax=Cory... 1516 0.0 UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrob... 1514 0.0 UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterob... 1512 0.0 UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomyceta... 1509 0.0 UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium gluta... 1508 0.0 UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacter... 1499 0.0 UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Stre... 1490 0.0 UniRef50_C0XQ89 Lhr family helicase n=2 Tax=Corynebacterium RepI... 1474 0.0 UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia... 1421 0.0 UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein... 1414 0.0 UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=... 1407 0.0 UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia... 1403 0.0 UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacter... 1397 0.0 UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brach... 1394 0.0 UniRef50_D1C082 DEAD/H associated domain protein n=1 Tax=Xylanim... 1394 0.0 UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliang... 1393 0.0 UniRef50_C4DG18 ATP dependent helicase, Lhr family n=1 Tax=Stack... 1386 0.0 UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Ac... 1379 0.0 UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candi... 1372 0.0 UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalk... 1366 0.0 UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerth... 1361 0.0 UniRef50_D2QB27 ATP-dependent helicase lhr n=3 Tax=Bifidobacteri... 1357 0.0 UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococ... 1344 0.0 UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytoc... 1332 0.0 UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinom... 1313 0.0 UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Microco... 1311 0.0 UniRef50_A1A256 ATP-dependent helicase II n=4 Tax=Bifidobacteriu... 1300 0.0 UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria Rep... 1298 0.0 UniRef50_Q67R22 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 1262 0.0 UniRef50_C0E805 Putative uncharacterized protein n=2 Tax=Coryneb... 1258 0.0 UniRef50_C6MZM9 DEAD/DEAH box helicase-like protein n=1 Tax=Legi... 1203 0.0 UniRef50_Q13M86 ATP-dependent helicase, DEAD/DEAH family n=5 Tax... 1199 0.0 UniRef50_A6CAB6 DEAD/DEAH box helicase-like protein n=1 Tax=Plan... 1192 0.0 UniRef50_Q4K580 Lhr n=14 Tax=Proteobacteria RepID=Q4K580_PSEF5 1187 0.0 UniRef50_Q1IK30 DEAD/DEAH box helicase-like n=3 Tax=Bacteria Rep... 1185 0.0 UniRef50_Q3BSA5 ATP-dependent DNA helicase Lhr n=12 Tax=Bacteria... 1167 0.0 UniRef50_B3DRA3 Lhr-like helicase n=11 Tax=Bacteria RepID=B3DRA3... 1166 0.0 UniRef50_C8W110 DEAD/DEAH box helicase domain protein n=2 Tax=Ba... 1159 0.0 UniRef50_A3ZQS6 DEAD/DEAH box helicase n=1 Tax=Blastopirellula m... 1154 0.0 UniRef50_D2QY58 DEAD/H associated domain protein n=1 Tax=Pirellu... 1145 0.0 UniRef50_A4BMP7 Probable ATP-dependent DNA helicase n=1 Tax=Nitr... 1138 0.0 UniRef50_C1F8X5 Helicase, DEAD/DEAH domain protein n=1 Tax=Acido... 1130 0.0 UniRef50_Q2SEQ3 Lhr-like helicase n=1 Tax=Hahella chejuensis KCT... 1129 0.0 UniRef50_Q01U88 ATP dependent helicase, Lhr family n=1 Tax=Candi... 1116 0.0 UniRef50_C8RVX4 ATP-dependent DNA helicase (Fragment) n=2 Tax=Co... 1113 0.0 UniRef50_B5E8L0 DEAD/H associated domain protein n=1 Tax=Geobact... 1113 0.0 UniRef50_D0LRM6 DEAD/H associated domain protein n=1 Tax=Haliang... 1113 0.0 UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkho... 1112 0.0 UniRef50_A7H7C5 DEAD/H associated domain protein n=1 Tax=Anaerom... 1110 0.0 UniRef50_C6CYT0 DEAD/DEAH box helicase domain protein n=1 Tax=Pa... 1110 0.0 UniRef50_B1FTZ8 DEAD/H associated domain protein n=2 Tax=Burkhol... 1106 0.0 UniRef50_D2NPL8 Lhr-like helicase n=2 Tax=Rothia mucilaginosa Re... 1101 0.0 UniRef50_B5JLM6 DEAD/H associated family n=1 Tax=Verrucomicrobia... 1085 0.0 UniRef50_D0WMV8 Putative DEAD/DEAH box helicase n=1 Tax=Actinomy... 1077 0.0 UniRef50_B8J8Q2 DEAD/H associated domain protein n=3 Tax=Cystoba... 1059 0.0 UniRef50_A8RJ57 Putative uncharacterized protein n=1 Tax=Clostri... 1058 0.0 UniRef50_A9GB61 Putative ATP-dependent helicase, N-terminal n=1 ... 1044 0.0 UniRef50_A9KJU0 DEAD/DEAH box helicase domain protein n=3 Tax=Cl... 1029 0.0 UniRef50_C5EPU4 Putative uncharacterized protein n=4 Tax=Clostri... 1026 0.0 UniRef50_D2L062 DEAD/DEAH box helicase domain protein n=2 Tax=De... 1011 0.0 UniRef50_D1NRV9 ATP-dependent helicase II n=1 Tax=Bifidobacteriu... 997 0.0 UniRef50_D2MKC9 DEAD/H associated domain protein n=1 Tax=Candida... 955 0.0 UniRef50_A0LV08 DEAD/H associated domain protein n=1 Tax=Acidoth... 921 0.0 UniRef50_C5AJ01 DEAD/H associated domain protein n=1 Tax=Burkhol... 874 0.0 UniRef50_D2LLH6 DEAD/H associated domain protein n=3 Tax=Aciduli... 844 0.0 UniRef50_Q8U202 Large helicase-related protein n=3 Tax=Thermococ... 828 0.0 UniRef50_C7DIU9 DEAD/H associated domain protein n=1 Tax=Candida... 788 0.0 UniRef50_Q57742 Uncharacterized ATP-dependent helicase MJ0294 n=... 787 0.0 UniRef50_C5U8C6 DEAD/H associated domain protein n=1 Tax=Methano... 786 0.0 UniRef50_O27830 Uncharacterized ATP-dependent helicase MTH_1802 ... 786 0.0 UniRef50_A5UKH9 ATP-dependent helicase, Lhr-like protein n=5 Tax... 783 0.0 UniRef50_Q6L0N7 ATP-dependent helicase n=1 Tax=Picrophilus torri... 768 0.0 UniRef50_B3T6F6 Putative DEAD/DEAH box helicase n=1 Tax=uncultur... 753 0.0 UniRef50_UPI0000F5176A ATP-dependent helicase n=1 Tax=Ferroplasm... 750 0.0 UniRef50_Q0W5W5 Lhr-like RNA helicase n=12 Tax=Euryarchaeota Rep... 745 0.0 UniRef50_D2EED6 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 721 0.0 UniRef50_D2RXL5 DEAD/H associated domain protein n=5 Tax=Halobac... 692 0.0 UniRef50_Q0W7D8 ATP-dependent RNA helicase n=3 Tax=Euryarchaeota... 681 0.0 UniRef50_Q18G68 Lhr-like helicase n=2 Tax=Halobacteriaceae RepID... 680 0.0 UniRef50_Q46BX9 ATP-dependent RNA helicase n=4 Tax=Methanosarcin... 668 0.0 UniRef50_B1Y9J8 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 651 0.0 UniRef50_UPI0001745EC8 large helicase-related protein (lhr-2) n=... 650 0.0 UniRef50_Q649R1 ATP-dependent helicase n=4 Tax=environmental sam... 649 0.0 UniRef50_A8MBG3 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 646 0.0 UniRef50_B4D6Q0 DEAD/H associated domain protein n=1 Tax=Chthoni... 629 e-178 UniRef50_Q11PA5 ATP-dependent helicase n=2 Tax=Sphingobacteriale... 622 e-176 UniRef50_B5ICF6 DEAD/DEAH box helicase domain protein n=2 Tax=Ac... 622 e-176 UniRef50_B1ZZM6 DEAD/H associated domain protein n=1 Tax=Opitutu... 609 e-172 UniRef50_Q3IP60 Lhr-like helicase n=5 Tax=Halobacteriaceae RepID... 609 e-172 UniRef50_A4CH41 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 608 e-172 UniRef50_C1RMK0 Lhr-like helicase n=1 Tax=Cellulomonas flavigena... 605 e-171 UniRef50_Q1YKM0 ATP-dependent helicase n=2 Tax=Aurantimonas mang... 604 e-171 UniRef50_C7DIA3 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 602 e-170 UniRef50_A3CUY2 DEAD/DEAH box helicase domain protein n=5 Tax=Me... 601 e-170 UniRef50_B1L6H5 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 599 e-169 UniRef50_A1RT46 DEAD/DEAH box helicase domain protein n=5 Tax=Th... 598 e-169 UniRef50_O29116 Large helicase-related protein (Lhr-1) n=2 Tax=A... 598 e-169 UniRef50_B9LRP7 DEAD/DEAH box helicase domain protein n=7 Tax=Ha... 596 e-168 UniRef50_C5A764 ATP-dependent helicase, lhr-like protein (Lhr) n... 594 e-168 UniRef50_Q6MCM6 Putative uncharacterized protein n=1 Tax=Candida... 594 e-168 UniRef50_Q1QRK7 DEAD/DEAH box helicase-like n=6 Tax=Alphaproteob... 593 e-167 UniRef50_Q3JLU0 ATP-dependent helicase, DEAD/DEAH family n=75 Ta... 590 e-166 UniRef50_A8M9R8 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 589 e-166 UniRef50_D2EE81 DEAD/DEAH box helicase domain protein n=1 Tax=Ca... 589 e-166 UniRef50_B6YWG2 Large helicase-related protein n=1 Tax=Thermococ... 584 e-165 UniRef50_D2RFY4 DEAD/DEAH box helicase domain protein n=1 Tax=Ar... 582 e-164 UniRef50_Q0C4L0 ATP-dependent helicase, DEAD/DEAH family n=6 Tax... 581 e-164 UniRef50_Q7UX43 Putative ATP-dependent helicase n=1 Tax=Rhodopir... 579 e-163 UniRef50_B4RRM3 ATP-dependent RNA helicase, DEAD/DEAH box family... 579 e-163 UniRef50_A2BMA9 DEAD/DEAH box helicase n=1 Tax=Hyperthermus buty... 573 e-161 UniRef50_A8AC71 DEAD/DEAH box helicase domain protein n=1 Tax=Ig... 571 e-161 UniRef50_C3NGE7 DEAD/DEAH box helicase domain protein n=12 Tax=S... 569 e-160 UniRef50_Q8TGY8 Lhr-like Superfamily II helicase n=1 Tax=Methano... 568 e-160 UniRef50_Q2IR64 DEAD/DEAH box helicase n=81 Tax=Alphaproteobacte... 566 e-159 UniRef50_Q3AJL5 DEAD/DEAH box helicase-like n=17 Tax=Cyanobacter... 565 e-159 UniRef50_Q470G5 Helicase, C-terminal:DEAD/DEAH box helicase, N-t... 556 e-156 UniRef50_C6Y055 DEAD/H associated domain protein n=7 Tax=Bactero... 553 e-155 UniRef50_A9A127 DEAD/DEAH box helicase domain protein n=2 Tax=Th... 552 e-155 UniRef50_A8A8X3 DEAD/DEAH box helicase domain protein n=1 Tax=Ig... 549 e-154 UniRef50_Q167Y6 ATP-dependent helicase, DEAD/DEAH box family n=2... 549 e-154 UniRef50_C5CN99 DEAD/H associated domain protein n=9 Tax=Proteob... 547 e-153 UniRef50_Q0BTQ2 ATP-dependent helicase n=27 Tax=Alphaproteobacte... 542 e-152 UniRef50_D0DB43 Dead/H associated domain protein n=4 Tax=Alphapr... 539 e-151 UniRef50_Q6KZS3 ATP-dependent RNA helicase n=4 Tax=Thermoplasmat... 538 e-151 UniRef50_Q1CZG3 ATP-dependent helicase, DEAD/DEAH box family n=5... 536 e-150 UniRef50_B6YUR4 Large helicase-related protein n=5 Tax=Euryarcha... 517 e-144 UniRef50_Q9Y9V1 Putative ATP-dependent helicase n=1 Tax=Aeropyru... 517 e-144 UniRef50_A1RYY4 DEAD/DEAH box helicase domain protein n=1 Tax=Th... 504 e-141 UniRef50_A1TJ45 DEAD/H associated domain protein n=5 Tax=Comamon... 501 e-139 UniRef50_A4YHK3 DEAD/DEAH box helicase domain protein n=12 Tax=S... 495 e-138 UniRef50_A3DN94 DEAD/DEAH box helicase domain protein n=1 Tax=St... 494 e-137 UniRef50_B8D5X5 DEAD/DEAH box helicase domain protein n=1 Tax=De... 485 e-135 UniRef50_Q74ZT5 AGR113Wp n=3 Tax=cellular organisms RepID=Q74ZT5... 480 e-133 UniRef50_A2BLG2 ATP dependent helicase n=1 Tax=Hyperthermus buty... 479 e-133 UniRef50_O75643 U5 small nuclear ribonucleoprotein 200 kDa helic... 477 e-132 UniRef50_A6QZE8 Putative uncharacterized protein n=1 Tax=Ajellom... 474 e-131 UniRef50_D0NTD6 Pre-mRNA-splicing helicase BRR2, putative n=1 Ta... 472 e-131 UniRef50_Q6BI73 DEHA2G12892p n=7 Tax=Saccharomycetaceae RepID=Q6... 472 e-131 UniRef50_Q55CI8 Activating signal cointegrator 1 complex subunit... 471 e-130 UniRef50_C0NG17 Pre-mRNA-splicing factor brr2 n=3 Tax=Leotiomyce... 467 e-129 UniRef50_C4QXA9 RNA-dependent ATPase RNA helicase (DEIH box) n=1... 467 e-129 UniRef50_P32639 Pre-mRNA-splicing helicase BRR2 n=6 Tax=Saccharo... 466 e-129 UniRef50_UPI0001791CD4 PREDICTED: similar to pre-mRNA-splicing h... 466 e-129 UniRef50_B6KDV2 Sec63 domain-containing DEAD/DEAH box helicase, ... 462 e-128 UniRef50_Q9UT24 Pre-mRNA-splicing factor brr2 n=5 Tax=Fungi/Meta... 461 e-128 UniRef50_B5YNG2 RNA or DNA helicase n=1 Tax=Thalassiosira pseudo... 460 e-127 UniRef50_B9WF65 Pre-mRNA-splicing helicase, putative n=4 Tax=Can... 459 e-127 UniRef50_C5DN54 KLTH0G14278p n=1 Tax=Lachancea thermotolerans CB... 456 e-126 UniRef50_D2UY12 U5 snRNP-specific spliceosomal protein n=1 Tax=N... 455 e-126 UniRef50_B7G2L8 Predicted protein n=2 Tax=Eukaryota RepID=B7G2L8... 454 e-125 UniRef50_C5DRW4 ZYRO0B11858p n=1 Tax=Zygosaccharomyces rouxii Re... 450 e-124 UniRef50_A1DP28 DEAD/DEAH box DNA helicase (Mer3), putative n=7 ... 450 e-124 UniRef50_B6HP67 Pc22g02150 protein n=1 Tax=Penicillium chrysogen... 450 e-124 UniRef50_C5FL91 ATP-dependent DNA helicase MER3 n=1 Tax=Microspo... 449 e-124 UniRef50_C6H6L0 Helicase family member n=2 Tax=Ajellomyces capsu... 449 e-124 UniRef50_B2AQ90 Predicted CDS Pa_4_4960 n=1 Tax=Podospora anseri... 449 e-124 UniRef50_B8N1Z3 DEAD/DEAH box DNA helicase (Mer3), putative n=2 ... 447 e-123 UniRef50_Q2GRG2 Putative uncharacterized protein n=1 Tax=Chaetom... 447 e-123 UniRef50_B4ITW8 GE23129 n=1 Tax=Drosophila yakuba RepID=B4ITW8_D... 445 e-123 UniRef50_Q6C0Y6 YALI0F20724p n=1 Tax=Yarrowia lipolytica RepID=Q... 444 e-122 UniRef50_C5PFY0 DEAD/DEAH box helicase family protein n=3 Tax=On... 444 e-122 UniRef50_Q8N3C0 Activating signal cointegrator 1 complex subunit... 443 e-122 UniRef50_Q6FKF7 Strain CBS138 chromosome L complete sequence n=1... 443 e-122 UniRef50_B6A9C7 Sec63 domain-containing protein n=1 Tax=Cryptosp... 442 e-122 UniRef50_B6JWX3 Antiviral helicase SLH1 n=1 Tax=Schizosaccharomy... 442 e-122 UniRef50_A5E7Q8 Putative uncharacterized protein n=1 Tax=Loddero... 441 e-121 UniRef50_B6H0I8 Pc12g14010 protein n=42 Tax=Saccharomyceta RepID... 440 e-121 UniRef50_O60072 Putative helicase mug81 n=1 Tax=Schizosaccharomy... 440 e-121 UniRef50_C4QQ45 U520, putative n=5 Tax=Bilateria RepID=C4QQ45_SCHMA 440 e-121 UniRef50_Q54G57 Activating signal cointegrator 1 complex subunit... 439 e-121 UniRef50_UPI00006CB1FA Type III restriction enzyme, res subunit ... 439 e-121 UniRef50_Q9FNQ1 RNA helicase n=14 Tax=Viridiplantae RepID=Q9FNQ1... 438 e-121 UniRef50_B8YFQ3 Meiotic helicase n=2 Tax=Sordaria macrospora Rep... 438 e-121 UniRef50_B2A401 DEAD/DEAH box helicase domain protein n=6 Tax=Fi... 438 e-121 UniRef50_B8MAK5 DEAD/DEAH box DNA helicase (Mer3), putative n=1 ... 438 e-120 UniRef50_C4JI59 Potential translation-regulating helicase n=1 Ta... 433 e-119 UniRef50_B2WF75 Activating signal cointegrator 1 complex subunit... 430 e-118 UniRef50_B2VW28 ATP-dependent DNA helicase MER3 n=1 Tax=Pyrenoph... 430 e-118 UniRef50_D2VZX0 Dead box RNA helicase n=1 Tax=Naegleria gruberi ... 430 e-118 UniRef50_B0EE60 U5 small nuclear ribonucleoprotein 200 kDa helic... 429 e-118 UniRef50_C5LWR0 U520, putative n=2 Tax=Perkinsus marinus ATCC 50... 429 e-118 UniRef50_Q9XWI1 Protein Y54E2A.4, partially confirmed by transcr... 428 e-118 UniRef50_Q24ZT1 Putative uncharacterized protein n=1 Tax=Desulfi... 428 e-118 UniRef50_Q7S600 Putative uncharacterized protein n=2 Tax=Sordari... 428 e-118 UniRef50_A7AM78 Sec63 domain containing protein n=1 Tax=Babesia ... 428 e-118 UniRef50_Q5KBS7 RNA helicase, putative n=2 Tax=Agaricomycotina R... 428 e-118 UniRef50_C5JLA1 DEAD/DEAH box DNA helicase n=2 Tax=Ajellomyces d... 427 e-117 UniRef50_A2DN52 Type III restriction enzyme, res subunit family ... 427 e-117 UniRef50_Q675T1 Putative helicase n=1 Tax=Oikopleura dioica RepI... 427 e-117 UniRef50_Q5CRF5 U5snrp Brr2 SFII RNA helicase (Sec63 and the sec... 426 e-117 UniRef50_B0CYQ0 Predicted protein n=2 Tax=Agaricales RepID=B0CYQ... 426 e-117 UniRef50_D1ITI2 Whole genome shotgun sequence of line PN40024, s... 426 e-117 UniRef50_B6DMK2 Meiotic crossover 1 n=3 Tax=Oryza sativa RepID=B... 424 e-116 UniRef50_A8NUR3 Type III restriction enzyme, res subunit family ... 423 e-116 UniRef50_Q9VF56 CG5205 n=16 Tax=Coelomata RepID=Q9VF56_DROME 423 e-116 UniRef50_A7F217 Putative uncharacterized protein n=2 Tax=Sclerot... 422 e-116 UniRef50_Q7RHC8 Drosophila melanogaster CG5931 gene product-rela... 421 e-116 UniRef50_D2A5P4 Putative uncharacterized protein GLEAN_15573 n=2... 420 e-115 UniRef50_C5RNG9 DEAD/DEAH box helicase domain protein n=2 Tax=Fi... 420 e-115 UniRef50_A8Q2W8 Putative uncharacterized protein n=1 Tax=Malasse... 420 e-115 UniRef50_A4QWU8 Putative uncharacterized protein n=1 Tax=Magnapo... 419 e-115 UniRef50_Q049S7 Lhr-like helicase n=12 Tax=Bacteria RepID=Q049S7... 419 e-115 UniRef50_B4SBA5 DEAD/DEAH box helicase domain protein n=1 Tax=Pe... 418 e-115 UniRef50_C4QEN2 Activating signal cointegrator 1 complex subunit... 418 e-115 UniRef50_C7PFC4 DEAD/DEAH box helicase domain protein n=2 Tax=Ch... 418 e-114 UniRef50_B8I966 DEAD/DEAH box helicase domain protein n=8 Tax=ce... 418 e-114 UniRef50_C1FG69 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 417 e-114 UniRef50_Q16RG8 ATP-dependent DNA helicase mer3 n=3 Tax=Culicini... 414 e-113 UniRef50_Q6L634 Mer3 n=3 Tax=Coprinopsis cinerea RepID=Q6L634_COPCI 414 e-113 UniRef50_B3L1P3 U5 small nuclear ribonucleoprotein-specific prot... 413 e-113 UniRef50_C6H1C9 Activating signal cointegrator 1 complex subunit... 413 e-113 UniRef50_B7FQ60 Predicted protein (Fragment) n=2 Tax=Bacillariop... 413 e-113 UniRef50_C0WD26 DEAD/DEAH helicase n=13 Tax=Bacteria RepID=C0WD2... 412 e-113 UniRef50_Q4PHY1 Putative uncharacterized protein n=1 Tax=Ustilag... 412 e-113 UniRef50_C4FYH2 Putative uncharacterized protein n=1 Tax=Abiotro... 411 e-112 UniRef50_Q385X9 ATP-dependent RNA helicase, putative n=8 Tax=Try... 411 e-112 UniRef50_B0EGZ1 U5 small nuclear ribonucleoprotein 200 kDa helic... 411 e-112 UniRef50_A7AW09 Helicase, putative n=2 Tax=Eukaryota RepID=A7AW0... 410 e-112 UniRef50_B3T467 Putative DEAD/DEAH box helicase n=2 Tax=environm... 410 e-112 UniRef50_Q0UNS2 Putative uncharacterized protein n=1 Tax=Phaeosp... 409 e-112 UniRef50_Q4MYU4 ATP-dependent RNA helicase, putative n=3 Tax=The... 409 e-112 UniRef50_Q235I9 Type III restriction enzyme, res subunit family ... 408 e-112 UniRef50_A2PYH4 Probable ATP-dependent DNA helicase HFM1 n=9 Tax... 408 e-112 UniRef50_D2KTB5 Helicase (Fragment) n=12 Tax=Euteleostomi RepID=... 408 e-111 UniRef50_Q4T4J7 Chromosome undetermined SCAF9604, whole genome s... 408 e-111 UniRef50_UPI0001758681 PREDICTED: similar to HFM1 protein n=1 Ta... 408 e-111 UniRef50_Q4UHC2 DEAD-box helicase, putative n=2 Tax=Theileria Re... 407 e-111 UniRef50_C6IVI9 DEAD/DEAH box helicase domain-containing protein... 407 e-111 UniRef50_P50830 Uncharacterized ATP-dependent helicase yprA n=32... 406 e-111 UniRef50_UPI00017C2C1A PREDICTED: similar to HFM1 protein n=1 Ta... 406 e-111 UniRef50_UPI000186F1CC ATP-dependent DNA helicase MER3, putative... 405 e-111 UniRef50_P51979 ATP-dependent DNA helicase MER3 n=8 Tax=Saccharo... 402 e-110 UniRef50_C4Y376 Putative uncharacterized protein n=1 Tax=Clavisp... 401 e-109 UniRef50_UPI0000E4A360 PREDICTED: similar to RNA helicase n=4 Ta... 401 e-109 UniRef50_D0NDF2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phy... 401 e-109 UniRef50_B2JHB8 DEAD/DEAH box helicase domain protein n=11 Tax=P... 400 e-109 UniRef50_C8VGA2 DEAD/DEAH box DNA helicase (Mer3), putative (AFU... 400 e-109 UniRef50_Q4DJ49 ATP-dependent RNA helicase, putative n=5 Tax=Try... 400 e-109 UniRef50_C8S8J7 DEAD/DEAH box helicase domain protein n=3 Tax=Ar... 400 e-109 UniRef50_D2RJD3 DEAD/DEAH box helicase domain protein n=1 Tax=Ac... 399 e-109 UniRef50_UPI000175F3DC PREDICTED: similar to HFM1 protein n=3 Ta... 398 e-108 UniRef50_Q55NJ7 Putative uncharacterized protein n=1 Tax=Filobas... 398 e-108 UniRef50_B4N718 GK23638 n=1 Tax=Drosophila willistoni RepID=B4N7... 397 e-108 UniRef50_Q6CR67 KLLA0D11462p n=1 Tax=Kluyveromyces lactis RepID=... 397 e-108 Sequences not found previously or not previously below threshold: >UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Enterobacteriaceae RepID=LHR_ECOLI Length = 1538 Score = 1725 bits (4467), Expect = 0.0, Method: Composition-based stats. Identities = 1538/1538 (100%), Positives = 1538/1538 (100%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA Sbjct: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG Sbjct: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE Sbjct: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA Sbjct: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN Sbjct: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS Sbjct: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV Sbjct: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD Sbjct: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL Sbjct: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI Sbjct: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN Sbjct: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR Sbjct: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF Sbjct: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA Sbjct: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL Sbjct: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH Sbjct: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 Query: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV Sbjct: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 Query: 1021 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV Sbjct: 1021 SYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEV 1080 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM Sbjct: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 Query: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH Sbjct: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 Query: 1201 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE 1260 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE Sbjct: 1201 LQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQE 1260 Query: 1261 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN Sbjct: 1261 ALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 Query: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS Sbjct: 1321 LAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDS 1380 Query: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP Sbjct: 1381 GRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP 1440 Query: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP Sbjct: 1441 AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG Sbjct: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 >UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Corynebacterineae RepID=D0L8P3_GORB4 Length = 1544 Score = 1539 bits (3984), Expect = 0.0, Method: Composition-based stats. Identities = 746/1565 (47%), Positives = 963/1565 (61%), Gaps = 67/1565 (4%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 ++ + F+ TR WF AF PT Q W+ A E+ LVIAPTGSGKTL+AFL+ALD Sbjct: 4 TAPVLQRFTAPTRRWFTGAFTAPTPAQVGAWNSIADGENTLVIAPTGSGKTLSAFLWALD 63 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 RL +R+LYISP+KAL DV+RNL+ PL GI + GE E N+ Sbjct: 64 RLAATPDRAA-------GTRVLYISPLKALAVDVERNLRAPLTGITRAAQELGEPEPNIT 116 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 VG+R+GDT A R L + PPDILITTPESLYLMLTS RETLR V+ VI+DEVHAVAG+ Sbjct: 117 VGLRSGDTAAAARRLLAKAPPDILITTPESLYLMLTSSVRETLRTVDAVIVDEVHAVAGT 176 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRG HLALSLERLD LL T AQRIGLSATVR VA FL G RP VV PPA + +R Sbjct: 177 KRGTHLALSLERLDDLLETPAQRIGLSATVRPPEVVADFLAGSRPCRVVRPPAAKTFDLR 236 Query: 248 IVVPVANMDDVSSVASGTGED---SHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + VPV +M ++ A T +D + + GS+WP++E I+D + +R+TIVF NSR L Sbjct: 237 VDVPVPDMANIPPPAEDTADDLDDAFSPTAGSLWPHVEASIVDAIEANRATIVFANSRRL 296 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSG--ATSNRVQSSDVFIARSHHGSVSKE 362 AE+LTARLNE+YA R A + S + +AR+HHGSVSKE Sbjct: 297 AERLTARLNEIYAQRSGVPVQAAANPGVPGGAPAHIMASGAAGGAPTTLARAHHGSVSKE 356 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 QRA E LKSG LRCVVATSSLELGIDMGAVDLVIQV P SVASGLQRIGRAGHQVG Sbjct: 357 QRAEIEDDLKSGRLRCVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGE 416 Query: 423 VSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 +S+G+ +P+ R DLV V VE M AG +E L P NPLDVLAQ T+AAAAMD L VD+W Sbjct: 417 ISQGVLYPKHRTDLVHCTVAVERMRAGAIEELRIPKNPLDVLAQHTIAAAAMDDLDVDQW 476 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + +RRAAP+++L R V+ +TLD++SGR+PS +F+ RP++ W+R+ L R GAQ LA Sbjct: 477 FDVIRRAAPYRELAREVYVSTLDLISGRFPSDEFAELRPRVTWDRDANTLVGRRGAQRLA 536 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 VTSGGTIPDRG++ V + + S RVGELDEEMVYESRV D+ LGATSWRI+ IT Sbjct: 537 VTSGGTIPDRGLFGVFMVGEK----SARVGELDEEMVYESRVGDVFALGATSWRIEDITH 592 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 D+V+VTPA G+ RLPFW G+ GRPAELG IG F +AD E Sbjct: 593 DRVLVTPAFGQPGRLPFWVGDAVGRPAELGAAIGKFTGAIADPQELDRQATELGLTEYAR 652 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 N+ LI EQR ATG +P R LV+ER RDE+GDWR+ILHSPYG RVH PWA AI+ R+ Sbjct: 653 DNLAALIAEQREATGHLPTDRTLVIERFRDELGDWRVILHSPYGLRVHAPWASAISARLQ 712 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 G + ASDDGI+ R+PDT+ + P AA+F+ +P+ + Q+V +A+ S++FA+RFRE Sbjct: 713 ETLGLAGATTASDDGIIVRLPDTEDEPPGAAVFVIDPDDIEQMVTDALAESSMFASRFRE 772 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 CAARALL+P R PG R PLWQQR R++QLL +A +PDFP++LE +RECLQDVYDLPAL Sbjct: 773 CAARALLLPRRDPGRRAPLWQQRQRSAQLLSVASQFPDFPIVLEAVRECLQDVYDLPALT 832 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 L+RR++ +++ + T PSPFA SLLFGYV FMY DAPLAERRA+ LSLD+ LL Sbjct: 833 DLLRRISTRRVRLVETETPEPSPFAASLLFGYVGAFMYSDDAPLAERRAAALSLDTSLLA 892 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTG 962 LLG+VD ELLDP VI V LQRL P R+A+ E + DLLR LGP+T E++A R+ G Sbjct: 893 QLLGRVDLRELLDPGVIAAVIARLQRLDPSRQARDAEDIVDLLRWLGPLTTEEVAARYQG 952 Query: 963 SSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSY 1022 ++ A+ L +L I G+ A ++D ARLRDALGV P +P Y V Sbjct: 953 --DDAAAVLADLHRAGPIISVTHQGRPLWAAVEDTARLRDALGVPAPLGVPAAYTDPVPD 1010 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQ---------- 1072 P+ DL RY R H T + A + +A+V + L +L Q V+ Sbjct: 1011 PVTDLVHRYARTHGPFTLTEAAESLGMAVAVVRDTLVRLAAQRKVVEGDFLPAAADDAHP 1070 Query: 1073 -DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPG 1131 W +V ++R SL A+R PV A T R L V PA Sbjct: 1071 TTQWCHADVLGQIRRGSLAASRADVAPVDAATLGRFLGGWHHVTPA-------------E 1117 Query: 1132 VYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG 1191 GVDGV V++QLAG LPAS WES ILPARV DYS MLDELL++G V+WSG ++G Sbjct: 1118 RLSGVDGVATVLDQLAGYPLPASAWESLILPARVADYSPAMLDELLSSGEVVWSGHGRIG 1177 Query: 1192 EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRD---- 1247 DG +A H + + P D+ + +A+ A++AVL GGA Q++ + Sbjct: 1178 GADGQIAFHPADLLPVTLEP--PDEIDLTAIHAALLAVLTPGGALRFAQLTDAASETLSA 1235 Query: 1248 KIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA--RTSTRRSHRARRGRPV 1305 + ++ ALW LVW G + +D +A +RAL R + R + R A RGR Sbjct: 1236 AGAAVPSTADIESALWDLVWAGQVANDSFAAVRALLRPDRRSVGRGAGSRPTPAHRGRAR 1295 Query: 1306 YAQPVSPRV-----------SYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIIS 1354 + R+ ++P GRW LL + L+ T AL E +L RYG+++ Sbjct: 1296 APRIRPQRLSTRFLSEHATGRPSSPTTTGRWFLLARDDLDPTAATQALCEQLLVRYGVVT 1355 Query: 1355 RQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQAT 1414 R +V E +PGGF + EDSG + RG +V+GLGGAQFA T+D LR A A Sbjct: 1356 RGSVATEGVPGGFARVYKALSVFEDSGVVRRGYYVDGLGGAQFARPTTVDELRRHAVDAD 1415 Query: 1415 QTRHYTPVALSANDPANVWGNLLPWPA---HPATLVPTRRAGALVVVSGGKLLLYLAQGG 1471 V L+A DPAN +G +L WP + P R+AGALVV+ G+ +L++ +GG Sbjct: 1416 SAAP--AVVLAATDPANPYGAVLDWPETSAEDSGHRPGRKAGALVVLLAGEPVLFVERGG 1473 Query: 1472 KKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSS 1531 K +L + + L AL A+R R T+ +V+ PV + M +L +AGF+++ Sbjct: 1474 KTVLTFSSDADRL-RTAAGALADAVRAGRLSRLTIDQVDSRPVLGSEMAPVLVDAGFATT 1532 Query: 1532 PQGLD 1536 P+G+ Sbjct: 1533 PRGVR 1537 >UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteobacteria RepID=Q6D6U1_ERWCT Length = 1598 Score = 1534 bits (3972), Expect = 0.0, Method: Composition-based stats. Identities = 899/1587 (56%), Positives = 1125/1587 (70%), Gaps = 68/1587 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ AT DWF+ F PTAVQ W H+LVIAPTGSGKTLAAF++A+DRLF E Sbjct: 16 FTTATLDWFVSQFGTPTAVQDAAWTAIGGGHHSLVIAPTGSGKTLAAFMHAIDRLFSEQV 75 Query: 75 EDTREAHKRKT-----SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + K +R+LYISP+KALG DVQRNL +PL+GI R+RRG+ V L VG Sbjct: 76 KAFTPDTKNARPRATKTRVLYISPVKALGADVQRNLSLPLQGIMQVRQRRGDANVVLTVG 135 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 +RTGDT ER++L R PPDILITTPESL+LMLTSRARE LR V T+IIDE+HAVAG+KR Sbjct: 136 LRTGDTTTAERARLVRRPPDILITTPESLFLMLTSRAREALRDVSTIIIDEIHAVAGTKR 195 Query: 190 GAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 G+HLALSLERLDALL T AQRIGLSATVR VA FLGG+RPVT+V PP+ RH +RIV Sbjct: 196 GSHLALSLERLDALLDTPAQRIGLSATVRPVERVAEFLGGERPVTIVAPPSSRHLDVRIV 255 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 VPV +M ++ G ED+ GR GS+WP++E ILD+VL RSTIVF NSRG+ E+LT Sbjct: 256 VPVEDMSNIPEPEHG--EDAGTGRPGSVWPHVEASILDQVLSRRSTIVFANSRGVTERLT 313 Query: 310 ARLNELYAARLQRSPSIAV-----DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 ARLNE YAARL + A + +ES +G+T R ++ IARSHHGSVSKE R Sbjct: 314 ARLNEAYAARLAGAEQTASTADSSPSTQYESMAGSTQARSAGAETTIARSHHGSVSKEHR 373 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 A EQALKSGELRCVVATSSLELGIDMG VDLVIQV+ P SVAS LQR+GRAGHQVGG+S Sbjct: 374 AEIEQALKSGELRCVVATSSLELGIDMGLVDLVIQVSAPPSVASALQRVGRAGHQVGGMS 433 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 GL +PR+RRD++DSAVIV+ M GR+E + PP NPLDVLAQQTVAAAAM+ L VD WY+ Sbjct: 434 TGLVYPRSRRDVIDSAVIVDAMLNGRIEAIAPPRNPLDVLAQQTVAAAAMEPLDVDAWYA 493 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 V RA P++ LPR FDATLDML+GRYPS DFS FRP+LVW+RETG L+ARPGAQ LAVT Sbjct: 494 AVCRAGPYRTLPRTAFDATLDMLAGRYPSDDFSGFRPRLVWDRETGQLSARPGAQHLAVT 553 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 SGGTIPDRGM+SV+LPEGEE+AGSRRVGELDEEMVYESRVND+ITLGATSWRIQ+ITRDQ Sbjct: 554 SGGTIPDRGMFSVVLPEGEERAGSRRVGELDEEMVYESRVNDVITLGATSWRIQEITRDQ 613 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA-----------DGAFFSGTIP 653 V+V PAPGRSARLPFWRG+G GRPAELGE IG FL L + Sbjct: 614 VVVIPAPGRSARLPFWRGDGIGRPAELGEAIGAFLGQLEPDISGASSSPFPEPDTRTRLE 673 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + N I N+ L+ EQR ATG++P R L++ERCRDE+GDWR+ILHSPYGRR+HEPW Sbjct: 674 AIGLDGNAIGNMLALLSEQRAATGVLPTDRTLIIERCRDELGDWRLILHSPYGRRIHEPW 733 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 A+AIA RI W D +VV+SDDGIVAR PDT G++P A +FLF+P+KL + V AVG S Sbjct: 734 ALAIAQRIRERWKIDPAVVSSDDGIVARFPDT-GRVPGAELFLFDPDKLRRTVSVAVGGS 792 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQ 833 ALFAARFRECAARALL+ TPG R+PLWQQRLRA QLLE A+ YP+FP+++ET RECLQ Sbjct: 793 ALFAARFRECAARALLLARSTPGRRSPLWQQRLRAGQLLESARDYPEFPILIETARECLQ 852 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 DVYDL AL+ LMRRLN G +++ +VTT PSPFAT LLFGYVA+FMY++D P+AERRAS+ Sbjct: 853 DVYDLDALDELMRRLNTGSVRLVEVTTEVPSPFATDLLFGYVAQFMYETDVPMAERRASM 912 Query: 894 LSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTV 953 L+LDS LL LLG+V+ ELLDP V+ Q+++ELQRL G RAKG+EG+ DLLRELGP+ Sbjct: 913 LALDSTLLGELLGRVELSELLDPLVMTQLDQELQRLEVGYRAKGKEGVADLLRELGPLCT 972 Query: 954 EDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLP 1013 +++A R ++E A++L +L + +R+ MI +E A ++DA RLRDALGV LP LP Sbjct: 973 QEVAARLDSEADEAAAFLNSLESGRRVIRVMIGAREHWASIEDAGRLRDALGVPLPVGLP 1032 Query: 1014 EIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQ- 1072 +L + PLR L R+ R T A F LG ++VE L+Q+ EQG +++ + Sbjct: 1033 AAFLESTADPLRSLIARFARTRGPFTTGDAASAFGLGASVVEAVLRQIAEQGKLLSGRFG 1092 Query: 1073 --------------------DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQ 1112 + WV DEVFRRLR+RSLQAAREAT+PV Y RLLLERQ Sbjct: 1093 VRRGMKSPPQVSGDAGPLAQNEWVGDEVFRRLRVRSLQAAREATQPVPRHAYTRLLLERQ 1152 Query: 1113 GVLPATDGSPALFA-STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSE 1171 G++ + S + +++ G EG +GV++VIEQLAG+ LPAS+WE ILPARVRDY+ + Sbjct: 1153 GLVADSSQSAVVKGWNSARGALEGPEGVLQVIEQLAGMPLPASVWERHILPARVRDYAPD 1212 Query: 1172 MLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESF--TPAEADQANRSALQQAIVAV 1229 MLD LL++G V+WSG +LG DDGLVA HLQE+A E+ + + + S LQ AI+ + Sbjct: 1213 MLDALLSSGTVLWSGHDRLGNDDGLVAFHLQEFAPETLSMSSHASGAPDMSPLQSAILEL 1272 Query: 1230 LADGGAWFAQQISQRIRDKIGE---------SVDLSALQEALWALVWQGVITSDIWAPLR 1280 L+DGGA+F +Q++ +++ + + + L ALW LVW G IT+D PLR Sbjct: 1273 LSDGGAYFVRQLAAQVQVTLAQEYSEQHGAPDILTDNLHTALWDLVWAGCITNDTLTPLR 1332 Query: 1281 ALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYN-----TPNLAGRWSLLQVEPLND 1335 AL + R S R R R + + VS LAGRWS+++ EPL D Sbjct: 1333 ALAQVVQQPRPRALSSRRRRGLRGLSSATVSEEFHSGLTALNATTLAGRWSMIRTEPLPD 1392 Query: 1336 TERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGA 1395 T + +A E +LDRY +++R + EN+PGGF ++Q + R MED+GR++RGRFV GLG A Sbjct: 1393 TVKAIAWTEGLLDRYAVVTRNVTVYENLPGGFAALQPVFRGMEDTGRVIRGRFVLGLGAA 1452 Query: 1396 QFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGAL 1455 QFAER T+DRLR+LA + T PVALSA DP N +G +LPWP+H + + P RR GA+ Sbjct: 1453 QFAERTTVDRLRELAEE--TTTIPMPVALSAVDPGNPFGTILPWPSHASLMRPARRTGAI 1510 Query: 1456 VVVSGGKLLLYLAQGGKKMLVWQEKEE----LLAPEVFHALTTALRREPRLRFTLTEVND 1511 VV+ GG L+ YL QGG+++ + + ++ AL+TAL R+ R RFTL VN Sbjct: 1511 VVIDGGHLVFYLPQGGRQLFTYIDPDDAAQTEAIAAALAALSTALSRDKRNRFTLELVNG 1570 Query: 1512 LPVRQTPMFTLLREAGFSSSPQGLDWG 1538 +PVR + + L+ GFSS+P+GL WG Sbjct: 1571 VPVRMSKLTPALKAIGFSSAPKGLYWG 1597 >UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinomycetales RepID=A0JSK2_ARTS2 Length = 1694 Score = 1532 bits (3968), Expect = 0.0, Method: Composition-based stats. Identities = 744/1674 (44%), Positives = 979/1674 (58%), Gaps = 161/1674 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL--- 69 D FS ATR+WFL AF PT Q W+ + HALV+APTGSGKTLAAFL+ALDRL Sbjct: 31 DRFSQATREWFLGAFSAPTPAQNGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLQSS 90 Query: 70 ----------FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 + + ++ +R+LYISP+KALG DV+RNL+ PL GI +R Sbjct: 91 APAEPEALPGLDPAAKGRKPKTPKRKTRVLYISPLKALGVDVERNLRAPLIGITQTAKRL 150 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIID 179 G + VG+R+GDT +R L +PPDILITTPESL+LMLTS+ARETL V+T+I+D Sbjct: 151 GLPAPLITVGVRSGDTTTADRRALLSHPPDILITTPESLFLMLTSKARETLSEVDTIIVD 210 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 EVHAVAG+KRGAHLA+SLERLDALL AQRIGLSATV VA FL G PV +V PP Sbjct: 211 EVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPRELVAQFLAGSAPVEIVAPP 270 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGT--GEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 + ++ + + VPV +M D+ A G S + SIWP++E I+D V+ ++STIV Sbjct: 271 SKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIVDLVMANQSTIV 330 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ------------ 345 F NSR LAE+LTARLNE+YA R + S +D + + + Sbjct: 331 FANSRRLAERLTARLNEIYAERQLMAASGGLDGSGAGAPDFEPAGAPAGGASAAVPTSTA 390 Query: 346 -------------SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG 392 +D +AR+HHGSVSK+QRA+ E LKSG LRCVVATSSLELGIDMG Sbjct: 391 TPAHMMAQAGSTVGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVATSSLELGIDMG 450 Query: 393 AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE 452 AVDLV+QV +P SVASGLQR+GRAGHQVG VS+G+ FP+ R DLV + + VE M AG++E Sbjct: 451 AVDLVVQVESPPSVASGLQRVGRAGHQVGEVSQGVLFPKHRADLVHTTITVERMLAGKIE 510 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 L P NPLD+LAQQTVAA A+ ++ V+EW+S VRR+AP+ LPR F+ATLD+L+GRYP Sbjct: 511 RLYVPANPLDILAQQTVAATALGSIDVEEWFSTVRRSAPFASLPRSAFEATLDLLAGRYP 570 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE-------- 564 S +F+ RP+++W+R G + RPGAQ LAVTSGGTIPDRG++ V + E Sbjct: 571 SDEFAELRPRIIWDRNAGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIGTETEGTGSSGS 630 Query: 565 -----------------KAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 G RRVGELDEEMVYESRV D+ LGATSW+I+ IT D+V+V Sbjct: 631 PGSASGDGRAASPAAAAAKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVLV 690 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIANI 665 +PA G+ +LPFW+G GRP +LG +G F+ L+ D ++ N+ Sbjct: 691 SPAFGQPGKLPFWKGASLGRPVDLGRALGAFVRELSASDVGPAMERCKASGLDDFAANNL 750 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 + EQ+ AT +VP LV+ER DE+GDWR++LHSP+G VH PWA+A+ R+H + Sbjct: 751 IQYLAEQKLATEVVPSDTTLVVERFHDELGDWRVVLHSPFGMPVHAPWALAVGQRLHQRY 810 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G D S +A+DDGIV R+P + + P A +FLF+PE+L QIV VG SALFA+RFRECAA Sbjct: 811 GMDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASRFRECAA 870 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RALL+P +TPG R PLWQQR R++QLL++A+ YP FP++LET+RECLQDVYDLPAL+ + Sbjct: 871 RALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPALKDIA 930 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 + E++I TT PSPFA SLLFGYVA+F+Y+ D+PLAERRA+ L+LDS LL LL Sbjct: 931 ASIERRELRILQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTLLNELL 990 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE 965 G+V+ ELLD +VI E ELQRLAP RR +G EG+ DLLR LGP+T ++A R + Sbjct: 991 GRVELRELLDAKVIDATERELQRLAPDRRVRGMEGVADLLRLLGPLTPAEVAARLEPAGP 1050 Query: 966 EVASYLENLLAV-----------------------KRIFPAMISGQERLACMDDAARLRD 1002 VA + R I G ER A ++DAARLRD Sbjct: 1051 PVAEPAPGVEPAPVVEPVGTLVADAAAHLAALQRANRALRVNIGGVERFAAVEDAARLRD 1110 Query: 1003 ALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLR 1062 A+GV LP +P ++ V+ PL DL RY R H TA + A LG+A+V L++L Sbjct: 1111 AIGVPLPMGVPLAFIEPVADPLGDLVSRYARTHGPFTAAEAAARLGLGVAVVGTALKRLA 1170 Query: 1063 EQGLVMNLQQD-----------------------------------IWVSDEVFRRLRLR 1087 G V+ + W EV R+LR R Sbjct: 1171 ADGRVVEGEFRPHATPPRQVPETPEPGEEDAPALPSASTITLAGTSEWCDAEVLRKLRRR 1230 Query: 1088 SLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLA 1147 SL A R PV A+ Y R L Q V G+DG++ ++QL+ Sbjct: 1231 SLAALRAEVEPVDASAYGRFLPAWQNVRTPGRRG--------QSALRGLDGIITAVDQLS 1282 Query: 1148 GVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAE 1207 GV +PAS WE +L +RV DY MLDEL+A G V+WSG L +DG V+LHL + A Sbjct: 1283 GVPVPASAWEPLVLASRVSDYQPAMLDELMAAGEVLWSGAGALPGNDGWVSLHLADSAEL 1342 Query: 1208 SFTPAEADQANRSALQQAIVAVLAD-GGAWFAQQISQRIRDKIGESVDLSALQEALWALV 1266 + PA Q + QQ ++ L + GG +F +Q++ + + + ALW L Sbjct: 1343 TLNPAPDYQPGDA--QQRLLEHLQNNGGGYFFRQLTDIAGG-MDSVLSDQDVVSALWDLA 1399 Query: 1267 WQGVITSDIWAPLRALTRSSSNARTS------------TRRSHRARRGRPVYAQPVSPR- 1313 W G IT D +AP+RA+ A +R G A R Sbjct: 1400 WAGRITGDTFAPVRAMIAGGHTAHRQVARAPRARAPRMSRLGRAHGTGLMGSAGLTGGRY 1459 Query: 1314 -----VSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFP 1368 + P AGRWS L + L+ T A AE +LDRYG+++R +V+AENI GGF Sbjct: 1460 GSVTGAAPTPPLAAGRWSALPLPELDPTIHARATAELLLDRYGVVTRGSVMAENILGGFG 1519 Query: 1369 SMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQA-TQTRHYTPVALSAN 1427 M + +E++GR RG F+E LG AQFA T+DRLR + + +AL+A Sbjct: 1520 LMYKVLARLEEAGRCRRGYFIEHLGAAQFAVPATVDRLRSYSEDSQLAKPEPVALALAAT 1579 Query: 1428 DPANVWGNLLPWP----AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEEL 1483 DPAN +G LPWP + P R+AGALVV+ G L LY+ +GGK +L + E E+ Sbjct: 1580 DPANPYGAALPWPALSVEAGSGHRPGRKAGALVVMVDGALALYVERGGKTLLAFDEDPEV 1639 Query: 1484 LAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 LA ++R + + +VN + TP L AG S+P+GL Sbjct: 1640 LAAAAAAL-VGVVKRGAVDKLIMEKVNGHGILDTPAAAALTHAGAYSTPKGLRI 1692 >UniRef50_C8NN73 ATP-dependent helicase n=12 Tax=Corynebacterium RepID=C8NN73_COREF Length = 1602 Score = 1531 bits (3964), Expect = 0.0, Method: Composition-based stats. Identities = 708/1558 (45%), Positives = 962/1558 (61%), Gaps = 84/1558 (5%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 F P +WF F+ PT VQ TW A E+ALV+APTGSGKTLAAFL+AL+ L + Sbjct: 20 RFRPQVSEWFRDVFEAPTPVQEGTWRAVADGENALVVAPTGSGKTLAAFLWALNSLVEQT 79 Query: 74 GE-----DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 G+ + + + R+LYISP+KALG D++ NL+ PL GIA R G N+ V Sbjct: 80 GQTVLDTGSPTPVEGRRVRVLYISPLKALGVDIENNLRAPLTGIARTASRMGLDVPNITV 139 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK 188 G+R+GDTPA ER++ R PPDILITTPES YLMLTS+A L+ V+ VIIDE+HA+AG+K Sbjct: 140 GVRSGDTPAAERARQVRKPPDILITTPESAYLMLTSKAGAILKDVDVVIIDEIHAMAGTK 199 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RG HLAL+LERL+ L+ QR+GLSATVR VA FLGGDRPVT+V PPA + + + Sbjct: 200 RGVHLALTLERLEKLVARPIQRVGLSATVRPLERVAQFLGGDRPVTIVAPPAEKKWDLTV 259 Query: 249 VVPVANMDDVSSVASGTG-----------------EDSHAGREGSIWPYIETGILDEVLR 291 VPV +M D+ G+ +S +GSIWP+IE + +V+ Sbjct: 260 TVPVEDMSDLPVQEPGSTIGDYVIDDPLGLAGPGEAESALPTQGSIWPFIEHQVYQQVMS 319 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFI 351 RST+VF NSR AE+LT+RLNE++A S++ + + ++ V + I Sbjct: 320 ARSTLVFVNSRRTAERLTSRLNEIWALE-HDPESLSAERRRPPAQVMVAADEVGQAPAVI 378 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ 411 AR+HHGSVSK++RA+TE LK G L+ VV+TSSLELGIDMGAVDLV+QV +P SVA GLQ Sbjct: 379 ARAHHGSVSKDERAMTETMLKEGTLKAVVSTSSLELGIDMGAVDLVVQVESPPSVAGGLQ 438 Query: 412 RIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 R+GRAGH VG S G F+P+ R DLV +A+ VE M G +E L P N LDVLAQQTVAA Sbjct: 439 RVGRAGHSVGATSTGSFYPKHRSDLVQTAITVERMTQGLIEELKVPMNALDVLAQQTVAA 498 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A+ + VD+W+ VRRA P+++L R VFD+ +D++SG YPS DF+ RP++V++R +G+ Sbjct: 499 TAITDVHVDDWFDTVRRAYPYRELDREVFDSVIDLVSGVYPSTDFAELRPRVVYDRVSGM 558 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLG 591 L RPGAQ +AVTSGGTIPDRGM+ V L GE RRVGELDEEMVYESRV D+ TLG Sbjct: 559 LEGRPGAQRVAVTSGGTIPDRGMFGVFLMGGE--GTPRRVGELDEEMVYESRVGDVFTLG 616 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT 651 A+SWRI++ITRDQV+VTPAPG + RLPFW G+ GRPAELG +G + + S Sbjct: 617 ASSWRIEEITRDQVLVTPAPGHTGRLPFWTGDQAGRPAELGRALGAYRRRVLADPTTS-- 674 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 E N+ + EQ ATGI+P + LVLER RDE+GDWRI+LH+PYGR V+ Sbjct: 675 ----GLEGWAHDNLVTYLREQEEATGILPDEKTLVLERFRDELGDWRIVLHTPYGRGVNA 730 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVG 771 WA+AI RI L G DA VA DDGIV R+P+ D P A++F+F+ +++ + V E VG Sbjct: 731 AWALAIGARIAELTGMDAQAVAGDDGIVLRLPEGDE-EPGASLFMFDADEVEKTVTEQVG 789 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 +SALFA+RFRECAARALL+P R PG R PLWQQR RA+QLL++A+ YP FP+ILET+REC Sbjct: 790 NSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVREC 849 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 LQDVYDLPAL+ L+ L +++I++VTT PSPF++SLLF Y FMY+ D+PLAE+RA Sbjct: 850 LQDVYDLPALKELVGDLQLRKVRIAEVTTQQPSPFSSSLLFNYTGAFMYEGDSPLAEKRA 909 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 + L+LD LL LLG+V+ +LLDP VI +V +LQR RRA+ E L D LR LGP+ Sbjct: 910 AALALDPSLLAKLLGEVELRQLLDPDVIEEVHTQLQRKGE-RRARNNEELADSLRILGPI 968 Query: 952 TVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPES 1011 +++L + + ++ R I+G+ LA + DA LRDALGV +P Sbjct: 969 PLDELGEHISFDDPDLGD---------RAMTVRINGRPHLAQVLDAPLLRDALGVPVPPG 1019 Query: 1012 LPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQ--QLREQGLVMN 1069 +P + ++ L L R++R A+ LA F LGIA L+ + + Sbjct: 1020 VP-AQVETITDALEQLVNRWVRTRGPFVAQDLAEAFGLGIATAHTALRNADVVQGRYRQG 1078 Query: 1070 LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTS 1129 +Q+ + + EV RR+R RSL AR+ T+PV+ + +AR LL+ Q V Sbjct: 1079 VQEQEYCATEVLRRIRSRSLAIARQQTKPVSQSAFARFLLDWQQVA----------GVDK 1128 Query: 1130 PGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK 1189 GVDG VIEQLAGV LPAS WE +LP RV DY+ LDEL A+G V+ G + Sbjct: 1129 HPTLRGVDGTFAVIEQLAGVRLPASAWEDLVLPRRVGDYTPLHLDELTASGEVLVVGAGQ 1188 Query: 1190 LGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDK- 1248 G D + L +YAA+ E +ALQ++++ VLA GG + I + + Sbjct: 1189 AGSQDPWIMLLPADYAAQLMP--EPVTTGLTALQESVLEVLAPGGGFRFADILADVTGED 1246 Query: 1249 ---IGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPV 1305 I + L+EALW LV G+++ D +AP+RA S + A + RR +R+R Sbjct: 1247 LGLITGHISPEQLREALWGLVEAGLVSPDSFAPVRARLASGTTAHRAKRRPNRSR---LR 1303 Query: 1306 YAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPG 1365 + ++ + P++ GRWSL L+ T R LA E LDRYG+++R +V+AE++ G Sbjct: 1304 MGRTSFAQMESSPPDMRGRWSLSVRPALDATTRSLAHGEAWLDRYGVVTRGSVVAEDVIG 1363 Query: 1366 GFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHY 1419 GF + E+SG+ MRG +EGLG AQF+ IDRLR D+ + T Sbjct: 1364 GFALAYKVLSGFEESGKAMRGYLIEGLGAAQFSTPAIIDRLRGMDDSPDVEGWPSGTTDP 1423 Query: 1420 TPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQE 1479 ++A DPAN +G LPWP P+R AGA V+++ G LL +L +GG+ + ++ E Sbjct: 1424 EVYLIAAADPANPYGAALPWPEQG----PSRAAGATVIIADGLLLAHLTRGGRTLTLFTE 1479 Query: 1480 KEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 + +A + + + ++N V +P R AG S +P+G+ + Sbjct: 1480 EITHVARALAIQ----------EKLVVEKINGESVFDSPHLPAFRAAGASITPRGMRF 1527 >UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomycetales RepID=Q2J762_FRASC Length = 1567 Score = 1526 bits (3951), Expect = 0.0, Method: Composition-based stats. Identities = 746/1580 (47%), Positives = 950/1580 (60%), Gaps = 91/1580 (5%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 D PDP + FS TR WF AF T Q W +ALV+APTGSGKTLAA Sbjct: 24 PDPPDPLTA----FSAPTRSWFGAAFTAATPAQRGAWEAIRTGGNALVVAPTGSGKTLAA 79 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL++LD L R A + R+LY+SP+KAL DV+RNL+ PL GI +R G Sbjct: 80 FLWSLDTLARSAPP----AEPTRRCRVLYVSPLKALAVDVERNLRAPLAGIRSAAQRLGL 135 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEV 181 + ++ VG+R+GDTPA ER PPD+LITTPESL+L+LTS ARE+LRGV TVI+DEV Sbjct: 136 PQPDVTVGLRSGDTPAAERRGFGTRPPDVLITTPESLFLILTSAARESLRGVRTVIVDEV 195 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 HAVAG+KRGAHLALSLERLDALL T AQRIGLSATVR + A FLGG PV VV PPA Sbjct: 196 HAVAGTKRGAHLALSLERLDALLDTPAQRIGLSATVRPVEEAARFLGGTAPVAVVRPPAA 255 Query: 242 RHPQIRIVVPVANMDDVSSV---ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + QI +VVPV +M + S G + A SIWP +E +LD VL H ++IVF Sbjct: 256 KTLQIDVVVPVEDMTQLGGQLLDGSPDGSAASAPHRASIWPAVEQRVLDLVLAHSASIVF 315 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFI------- 351 NSR LAE+L ARLNELYA RL + + A ++ Sbjct: 316 ANSRRLAERLCARLNELYAERLAAATAADESVAGDGPGEAGRTSPAALMGASGQGGGTAG 375 Query: 352 ----ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVA 407 AR+HHGSVS+EQRA E+ LK+G L VVATSSLELGIDMGAVDLV+Q+ +P SVA Sbjct: 376 WPEIARAHHGSVSREQRAGIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQIGSPPSVA 435 Query: 408 SGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQ 467 +G+QR GRAGHQVG S+G+ P+ R DL++ AV+ E M +G +E L P NPLDVLAQQ Sbjct: 436 AGMQRTGRAGHQVGAASRGVIIPKHRSDLLECAVVAERMRSGAIERLRYPRNPLDVLAQQ 495 Query: 468 TVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR 527 VA AM+ VDE + VRR A + LP F+A LDML+GRYPS F+ RP++ W+R Sbjct: 496 IVAMTAMEDWHVDELGALVRRTATFATLPTSAFEAVLDMLAGRYPSDTFAELRPRITWDR 555 Query: 528 ETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 TGILTARPGAQ LAVTSGGTIPDRGM+ V L RVGELDEEMVYESRV D+ Sbjct: 556 VTGILTARPGAQRLAVTSGGTIPDRGMFGVFLVGERSS----RVGELDEEMVYESRVGDV 611 Query: 588 ITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--G 645 + LG++SWRI++IT D+V+VTPAPGR RLPFW G+ GRPAELG +G FL + Sbjct: 612 VLLGSSSWRIEEITADRVLVTPAPGRPGRLPFWHGDAPGRPAELGRALGAFLREITRLPA 671 Query: 646 AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY 705 + + ++ AN+ ++EQ+ A G + R +V+ER RDEIGDWR+ +HSP+ Sbjct: 672 QAAADRVRAAGLDDRATANLLRYLDEQKAAVGRLHDDRTIVVERFRDEIGDWRLAVHSPF 731 Query: 706 GRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQI 765 G V+ PWA+A+ R+ +G D ++ +DDGIVARIPD + P A + LFEP+++ I Sbjct: 732 GAPVNAPWALALGARLRERYGVDVQIMHTDDGIVARIPDA-AEPPGADLALFEPDEIDAI 790 Query: 766 VREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVIL 825 VR +GSSALFA+RFRECA RALL+P RTPG RTPLWQQR R++ LL +A + FPV+L Sbjct: 791 VRAEIGSSALFASRFRECAGRALLLPRRTPGRRTPLWQQRQRSAALLSVAATFASFPVVL 850 Query: 826 ETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 ET+RECLQDV+D+PAL LMR ++ +++ +V T +PSPFA++LLFGYVA FMY D P Sbjct: 851 ETMRECLQDVFDVPALAELMREVSARTLRVVEVETPSPSPFASALLFGYVAAFMYDGDVP 910 Query: 886 LAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLL 945 LAERRA VLSLDS LL LLG+ D EL+DP + QV +L RLAP R A+ EG+ DLL Sbjct: 911 LAERRAQVLSLDSSLLAELLGEADLRELIDPAALAQVAAQLTRLAPDRHARDVEGVADLL 970 Query: 946 RELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALG 1005 R LG +T E+ R +L L +R I+G+ER ++DA RLRDALG Sbjct: 971 RMLGDLTTEEAVARGATPG-----WLAELEQTRRALRVRIAGEERWVAIEDAGRLRDALG 1025 Query: 1006 VRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQG 1065 V LP +P+ + V PL DL RY R H E+ A LG A+V L L G Sbjct: 1026 VPLPVGVPDAFTEPVRDPLGDLISRYARTHGPFDTEEPAARLGLGTAVVAGVLDGLVRSG 1085 Query: 1066 LVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATD 1119 ++ + + W V R LR RSL A R+ V T L Q V Sbjct: 1086 RLVRGELHPDRGGEQWCDAGVLRALRRRSLAALRKEVEAVPPRTLGAFLPAWQSVT---- 1141 Query: 1120 GSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLAT 1179 G GVDGV+R +EQL G +PAS WE +LPARV DYS MLDEL + Sbjct: 1142 ----------SGRGRGVDGVLRAVEQLQGALIPASAWEQLVLPARVADYSPTMLDELCSA 1191 Query: 1180 GAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQ 1239 G V W+G L DDG + L L + A P + + A+ L AI+ L G A F + Sbjct: 1192 GEVHWAGAGGLPGDDGWLTLVLADTAPLLLPPPDPEIAS-GPLHTAILDALTGGAALFFR 1250 Query: 1240 QISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA 1299 +S R+ S+D +AL ALW LVW G +T+D APLRAL S+ + R A Sbjct: 1251 ALSDRMG-----SLDDTALATALWDLVWAGRVTNDTLAPLRALLGSAGRPYRAPR-PRAA 1304 Query: 1300 RRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVI 1359 R GRP + P AGRWSLL + T R ALAE +L+R+GI++R AV Sbjct: 1305 RYGRPAMPR------RAGPPTAAGRWSLLPERDTDPTRRAHALAEALLERHGIVTRGAVT 1358 Query: 1360 AENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL---------- 1409 E PGGF + + + ED+GR RG FVE LG AQFA +DRLR + Sbjct: 1359 GERHPGGFAGVYRVLSAFEDAGRARRGYFVESLGAAQFAVPGAVDRLRSIAAAQRDAEAA 1418 Query: 1410 ------ATQATQTRHYTPVALSANDPANVWGNLLPWPAHP-------ATLVPTRRAGALV 1456 A + V L+A DPAN +G LPWP P A P R+AGA+V Sbjct: 1419 PAWAQPAAGPPSSSSAQAVVLAAADPANPFGAALPWPTRPGDDADGAAGHRPGRKAGAMV 1478 Query: 1457 VVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQ 1516 V+ G+L+LY+ +GG+ +L W E + +AP V AL A+R R T+ + + + Sbjct: 1479 VIIDGELILYVERGGRSLLSWTEDDHRVAPAV-EALARAVRDGLLGRLTVEKADGQTIVG 1537 Query: 1517 TPMFTLLREAGFSSSPQGLD 1536 + + L AGF +P+GL Sbjct: 1538 STLGAALERAGFHPTPRGLR 1557 >UniRef50_Q5Z170 Putative ATP-dependent DNA helicase n=3 Tax=Corynebacterineae RepID=Q5Z170_NOCFA Length = 1584 Score = 1516 bits (3925), Expect = 0.0, Method: Composition-based stats. Identities = 744/1619 (45%), Positives = 964/1619 (59%), Gaps = 134/1619 (8%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 S VFS AT++WF AF PT+ Q W A EH LV+APTGSGKTL+AFL+A+D Sbjct: 2 VSFSTAVFSRATQEWFDGAFPAPTSAQLGAWQAIAAGEHTLVVAPTGSGKTLSAFLWAID 61 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 L + + + +LYISP+KAL DV+RNL+ PL GI +R G + Sbjct: 62 ELAATAPDPDA----PRGTTVLYISPLKALAVDVERNLRAPLVGITQTAKRLGLDPPEIT 117 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 VG+R+GDTPA R + R PPDILITTPESL+LMLTS ARETLR V TVI+DEVHA+AGS Sbjct: 118 VGVRSGDTPAAARRSMQRTPPDILITTPESLFLMLTSAARETLRTVRTVIVDEVHAIAGS 177 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRGAHLALSL RLD L QRIGLSATVR A +V FL G P+T+V+PPA + + Sbjct: 178 KRGAHLALSLARLDMLTERPVQRIGLSATVRPAEEVGRFLVGAAPITIVSPPAPKTFDLT 237 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + VPV +M E + + GSIWP+++ I+D VL HRS+IVF NSR LAE+ Sbjct: 238 VRVPVPDM----------TEPGESDQPGSIWPHVDEAIVDLVLAHRSSIVFANSRRLAER 287 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 LTARLNE YAAR+ + + G ++ + ++ +AR+HHGSVSKEQRA+ Sbjct: 288 LTARLNEAYAARVGDP---VSTSHAPPAQLGPSTEVIHGAEQLLARAHHGSVSKEQRALI 344 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E LKSG LRCVVATSSLELGIDMGAVDLV+QV P SVASGLQRIGRAGHQVG +S+G+ Sbjct: 345 EDDLKSGRLRCVVATSSLELGIDMGAVDLVVQVEAPPSVASGLQRIGRAGHQVGEISRGV 404 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 FP+ R D++ AV E M GR+E L P +PLD+LAQQTVA A++ + VD W+ VR Sbjct: 405 LFPKHRTDVIHCAVAAERMVTGRIEALRIPAHPLDILAQQTVAVCALEPIDVDAWFDAVR 464 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + LPR +++ LD+LSGRYPS +F+ RP+LVW+R+ G LT RPGAQ LAVTSGG Sbjct: 465 ATGSFATLPRSAYESVLDLLSGRYPSDEFAELRPRLVWDRDAGTLTGRPGAQRLAVTSGG 524 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 IPDRGM++V + + RVGELDEEMVYESRV D+ LGATSWRI++IT D+V+V Sbjct: 525 AIPDRGMFAVYMVGEKNT----RVGELDEEMVYESRVGDVFALGATSWRIEEITFDRVLV 580 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP----------WLA 657 TPA G+ RLPFW G+G GRPAELG +G+F+ A Sbjct: 581 TPAFGQPGRLPFWHGDGLGRPAELGAALGEFVRKAAKQTANRADAAADTDLGGLLAGAGL 640 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 + N N+ L+++QR ATG +P + LV+ER RDE+GDWR++LHSP+G VH PWA+A+ Sbjct: 641 DANAATNLVALLDDQRAATGQLPTDKTLVVERFRDELGDWRLVLHSPFGLPVHAPWALAV 700 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 R+ +G DA+ ASDDGIV R+PDT P A +F+FEP+++ +V E VG SALFA Sbjct: 701 GARLRERFGVDAAPNASDDGIVVRLPDTTDDPPGAELFVFEPDEIDDLVTEQVGGSALFA 760 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYD 837 +RFRECAARALL+P R PG R PLWQQR R++QLL++A+ +PDFP++LET+RECL+DVYD Sbjct: 761 SRFRECAARALLLPRRDPGKRAPLWQQRQRSAQLLDVARKFPDFPILLETVRECLRDVYD 820 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 LPAL L+ R+ ++++ +V T TPSPFA +LLF Y+ +FMY+ D+PLAERRA+ LSLD Sbjct: 821 LPALRDLLGRVARRQVRLVEVETATPSPFANALLFDYIGQFMYEGDSPLAERRAAALSLD 880 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 S LL LLG+V+ ELLD V+ Q E ELQRL P RRA+ EGL DLLR LGP+T E+ Sbjct: 881 SGLLAELLGRVELRELLDTAVLEQTERELQRLTPERRARDAEGLADLLRLLGPLTPEEAG 940 Query: 958 QRHTGSSEEVA------------------------------------------------S 969 QR + Sbjct: 941 QRCVRGRADEVADTGLPEADPSVAAAATRSADGAPDGSMAGAEPEPSEFPADDGTGPHHR 1000 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFL 1029 + L+A +R +G+ A ++DA+RLRDALGV LP P ++ V+ PL DL Sbjct: 1001 WFAELVAARRALEVSFAGRTWWAAVEDASRLRDALGVPLPIGTPAAFIEPVADPLGDLVG 1060 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QDIWVSDEVFRR 1083 RY R HA + +A F +G A+ L +L + V+ + W +V RR Sbjct: 1061 RYARTHAPFGLDAVARRFGIGPAVAATALHRLVTEKRVVEGEFTPGASGREWCDTQVLRR 1120 Query: 1084 LRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVI 1143 LR RSL AAR PVA + R L Q V G GVDGV V+ Sbjct: 1121 LRRRSLAAARHEVEPVATAAFGRFLPAWQHVG--------------TGELRGVDGVATVV 1166 Query: 1144 EQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQE 1203 EQLAGV PAS WES ILPARVRDY+ MLDEL ATG VIWSG + DG +ALHL E Sbjct: 1167 EQLAGVPAPASAWESLILPARVRDYTPAMLDELTATGEVIWSGHGAITAKDGWIALHLAE 1226 Query: 1204 YAAESFTPAEADQANRSALQQAIVA--------------------VLADGGAWFAQQISQ 1243 A + P D S ++A VL GGA+F +Q+S Sbjct: 1227 QAPFTLPP--PDDIELSETHLRLLAALGATPAPRAGADGPVPLPPVLHGGGAYFFRQLSD 1284 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 +D +A+ ALW LVW G++ D +AP+RAL ++ T+ R RA RGR Sbjct: 1285 ATG-----LLDDTAVAAALWELVWAGLVAGDTFAPVRALLSGTARTTTAHRTPRRAPRGR 1339 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENI 1363 +P P P +AGRWSLL ++T R A A+ +L+RYG+++R +V E + Sbjct: 1340 AYLPRPSLP-TRTGPPAVAGRWSLLPERVTDNTVRAHATADILLERYGVLTRGSVQNEGV 1398 Query: 1364 PGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLA----TQATQTRHY 1419 PGGF M + ED GR RG FV+ LGGAQF+ +DRLR + Sbjct: 1399 PGGFALMYRVLTEFEDRGRCRRGYFVDSLGGAQFSTTDVVDRLRSHDTDRGRPGDRAPAP 1458 Query: 1420 TPVALSANDPANVWGNLLPWP--AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVW 1477 + + L+A DPAN +G LPWP P R+AGALVV+ GG+L+LYL +GGK +L + Sbjct: 1459 SGLVLAACDPANPYGAALPWPKNEGEGGHRPGRKAGALVVLVGGELVLYLERGGKTLLTF 1518 Query: 1478 QEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 + + ++ V L +AGF+ +P+GL Sbjct: 1519 TTDPTARRAAATAL-AEVVFHGRVDALVIDRIDGETVHGNTFAAFLTDAGFADTPRGLR 1576 >UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HC38_ARTCA Length = 1729 Score = 1514 bits (3921), Expect = 0.0, Method: Composition-based stats. Identities = 738/1717 (42%), Positives = 973/1717 (56%), Gaps = 205/1717 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+ TRDWFL AF +PT Q W+ + HALV+APTGSGKTLAAFL+ALDRL Sbjct: 22 FTRPTRDWFLGAFTEPTPAQDGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLLSAAP 81 Query: 75 ED--------------------------TREAHKRKTSRILYISPIKALGTDVQRNLQIP 108 R ++ +++LYISP+KALG DV+RNL+ P Sbjct: 82 APDTESLAEAAVPAAAAGTKGTKAPAKARRPRAPKRKTKVLYISPLKALGVDVERNLRSP 141 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE 168 L GI +R G + VG+R+GDT +R L NPPDILITTPESL+LMLTSRARE Sbjct: 142 LIGITQTAKRLGMPAPLITVGVRSGDTTTADRRALLSNPPDILITTPESLFLMLTSRARE 201 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 TL V+T+IIDEVHAVAG+KRGAHLA+SLERLDALL AQRIGLSATV VA FL Sbjct: 202 TLTEVDTIIIDEVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPKELVAQFLA 261 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGT--GEDSHAGREGSIWPYIETGIL 286 G PV +V PP+ ++ + + VPV +M D+ A G S + SIWP++E I+ Sbjct: 262 GTAPVEIVAPPSKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIV 321 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQS 346 D VL ++STIVF NSR L+E+LTARLNE+YA R + D + + + S Sbjct: 322 DLVLANQSTIVFANSRRLSERLTARLNEIYAERQLMAAGGGWDGSLADGAEAFDAPGNGS 381 Query: 347 SDVFIA-------------------------RSHHGSVSKEQRAITEQALKSGELRCVVA 381 + R+HHGSVSK+QRA+ E LKSG LRCVVA Sbjct: 382 APPSGVPASTATPAHMMAQAGSSAGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVA 441 Query: 382 TSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAV 441 TSSLELGIDMGAVDLV+QV +P SVASGLQR+GRAGHQVG +S+G+ FP+ R DLV +A+ Sbjct: 442 TSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGEISQGVLFPKHRADLVHTAI 501 Query: 442 IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFD 501 VE M G++E L+ P NPLD+LAQQTVAA A+ ++ V+EW++ VRR+AP+ LPR F+ Sbjct: 502 TVERMLDGKIERLSIPANPLDILAQQTVAATALGSIDVEEWFATVRRSAPFASLPRSAFE 561 Query: 502 ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 ATLD+L+GRYPS +F+ RP+++W+R G + RPGAQ LAVTSGGTIPDRG++ V + Sbjct: 562 ATLDLLAGRYPSDEFAELRPRIIWDRNEGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIG 621 Query: 562 GEEKA---------------GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 E + G RRVGELDEEMVYESRV D+ LGATSW+I+ IT D+V+ Sbjct: 622 TEMEGSASPSEDGKPAPAPKGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVL 681 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIAN 664 V+PA G+ +LPFW+G+ GRP +LG +G F+ L+ D + + N Sbjct: 682 VSPAFGQPGKLPFWKGDSLGRPVDLGRALGAFVRELSASDAGPAAERCQASGLDAFAANN 741 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 + + EQ+ AT +VP LV+ER DE+GDWR+ILHSP+G VH PWA+A+ R+H Sbjct: 742 LIQYLSEQKQATEVVPSDTTLVVERFHDELGDWRVILHSPFGMPVHAPWALAVGQRLHQR 801 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 +G D S +A+DDGIV R+P + + P A +FLF+PE+L QIV VG SALFA+RFRECA Sbjct: 802 YGLDGSAMAADDGIVLRVPMMEDEPPGAELFLFDPEELEQIVTAEVGGSALFASRFRECA 861 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 ARALL+P +TPG R PLWQQR R++QLL++A+ YP FP++LET+RECLQDVYDLPAL+ + Sbjct: 862 ARALLLPRQTPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPALKDI 921 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 + E+++ TT PSPFA SLLFGYVA+F+Y+ D+PLAERRA+ L+LDS LL L Sbjct: 922 AAAVERRELRVVQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTLLNEL 981 Query: 905 LGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR------------------ 946 LG+V+ ELLD +VI E ELQRL P RR +G EG+ DLLR Sbjct: 982 LGRVELRELLDAKVIDATERELQRLVPDRRVRGLEGVADLLRLLGPLDPDEAAARLEPAG 1041 Query: 947 --------------------------ELGPMTVEDLAQRHTGSSEEVAS----------- 969 L LA E V + Sbjct: 1042 GVESAAGVEPATAGEPIEAPEAEPVGTLAAQADAGLADDLAPEPEPVEATPPPIASATVE 1101 Query: 970 ----YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLR 1025 +L L R I G ER A ++DAARLRDA+GV LP +P ++ V+ PL Sbjct: 1102 KATAHLVALQRANRAIKVNIGGAERFAAVEDAARLRDAIGVPLPMGVPLAFIEPVADPLG 1161 Query: 1026 DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQD------------ 1073 DL RY R H TA + A LG+A+V L++L + G V+ + Sbjct: 1162 DLVSRYARTHGPFTAAEAAARLGLGVAVVGTALKRLADDGRVVEGEFRPHATPAAAGPEA 1221 Query: 1074 ------------------------------IWVSDEVFRRLRLRSLQAAREATRPVAATT 1103 W EV R+LR RSL A R PV A Sbjct: 1222 TPTGREDDGQPDGDGRQEETLREMVHAAVSEWCDAEVMRKLRRRSLAALRAEVEPVDAAA 1281 Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 Y R L Q V G G+DG++ I+QL+GV +PAS WE IL Sbjct: 1282 YGRFLPAWQNVRIPGGGRG-------QPSLRGLDGIVTAIDQLSGVPIPASAWEPLILAG 1334 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQ 1223 RV +Y MLDEL+A G V+WSG L +DG ++LHL + A + PA + + L Sbjct: 1335 RVSNYQPAMLDELMAAGEVLWSGAGALPGNDGWISLHLADSAELTLNPAPDYEPGDAGL- 1393 Query: 1224 QAIVAVLA-DGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRAL 1282 ++ L +GG +F +Q+++ + + + + ALW L W G IT D +AP+R+L Sbjct: 1394 -RLLDHLRNNGGGYFFRQLTE-VAGGMDSVLSDQEVVSALWDLAWAGRITGDTFAPVRSL 1451 Query: 1283 TRSSSNARTSTRRSHRARRGR-----------------PVYAQPVSPRVSYNTPNLAGRW 1325 A ++ R+R R + S P AGRW Sbjct: 1452 IAGGHTAHRQVAKAPRSRAPRLNRLGRSHGTGLMGSAGLAGGRYGSQGAVATPPTAAGRW 1511 Query: 1326 SLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMR 1385 S L L+ T A AE +LDRYG+++R +V+AE I GGF M + +E++GR R Sbjct: 1512 SALPQPELDATIHARATAELLLDRYGVVTRGSVMAEQILGGFGLMYKVLARLEEAGRCRR 1571 Query: 1386 GRFVEGLGGAQFAERLTIDRLRDLATQAT-QTRHYTPVALSANDPANVWGNLLPWPA--- 1441 G F+E LG AQFA T+DRLR A + +AL+A DPAN +G LPWPA Sbjct: 1572 GYFIEHLGAAQFAVPATVDRLRSYAEDSQIAKAEPVALALAATDPANPYGAALPWPALRD 1631 Query: 1442 -HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 P R+AGALVV+ G L+LY+ +GGK +L + + +L AL + R Sbjct: 1632 DAGTGHRPGRKAGALVVLVDGALVLYVERGGKTLLAFSDDPTIL-DAAGAALVGVVTRGA 1690 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 + + +VN + TP+ L AG S+P+GL Sbjct: 1691 VDKLIMEKVNGQGILDTPIAAALSAAGAYSTPKGLRI 1727 >UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterobacteriaceae RepID=C8Q5F9_9ENTR Length = 1525 Score = 1512 bits (3915), Expect = 0.0, Method: Composition-based stats. Identities = 902/1540 (58%), Positives = 1108/1540 (71%), Gaps = 28/1540 (1%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 S F P T+ WF AF PT VQ + W A +++ LVIAPTGSGKTLAAFL+A+D Sbjct: 2 SDAALQHFLPTTQAWFRAAFAAPTPVQVEAWQAIASAKNCLVIAPTGSGKTLAAFLHAID 61 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 LFRE + A + +RILYISP+KAL DVQRNLQ+PL G+ +RR++GE E+ L+ Sbjct: 62 ALFRERSQPATVA-RSHKTRILYISPVKALAADVQRNLQLPLAGVEAQRRQQGEAEIALQ 120 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 VG+R+GDT + ER++L R PPDILITTPESL+LMLTS+ARETLRGV TVI+DEVHAVAGS Sbjct: 121 VGMRSGDTRSAERAQLQRRPPDILITTPESLFLMLTSKARETLRGVSTVIVDEVHAVAGS 180 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRG+HLALSLERLD LL AQRIGLSATVR VA FLGG VVNP A R Q+ Sbjct: 181 KRGSHLALSLERLDTLLAQPAQRIGLSATVRPPEAVARFLGGAGETLVVNPAATRPLQLT 240 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 I VPVA+M D+ GSIWP+IE GILDEVLRHR+T+VFTNSRGLAEK Sbjct: 241 ITVPVADMTDIQQRPDAQAAQDGTLAAGSIWPHIEAGILDEVLRHRATLVFTNSRGLAEK 300 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 LTARLNE YA +L P+ A + S +G T R Q D IARSHHGSVSKEQR Sbjct: 301 LTARLNERYARQLGEQPTEPEAAFGYGSFTGGTEKRAQLPDNLIARSHHGSVSKEQRLEI 360 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E ALK+GELRCVVATSSLELGIDMG +DLVIQV PLSVAS LQR+GRAGHQVGG KG+ Sbjct: 361 ENALKAGELRCVVATSSLELGIDMGDIDLVIQVGAPLSVASALQRVGRAGHQVGGTPKGI 420 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F+PRTRRDL+D+AV VE M AG L+ + PPHNPLDVLAQ TVAAAAM+ LQVD+W++ VR Sbjct: 421 FWPRTRRDLLDTAVTVEAMLAGELDAIAPPHNPLDVLAQHTVAAAAMETLQVDDWFALVR 480 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 RA P++ LPR F+A LDMLSGRYP+ +F+ RP+++W+R L+ RPGAQ LAVTSGG Sbjct: 481 RADPFRALPRAAFEAVLDMLSGRYPADEFANLRPRIIWDRHNHTLSGRPGAQHLAVTSGG 540 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPDRGM+SV+LPEGEE+ G+RRVGELDEEMVYESRVNDIITLGATSWRIQQIT DQV+V Sbjct: 541 TIPDRGMFSVMLPEGEEQTGARRVGELDEEMVYESRVNDIITLGATSWRIQQITHDQVVV 600 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQG 667 PAPGRSARLPFW GEG GR A LGE IG FL + GA + T +E+ NIQ Sbjct: 601 VPAPGRSARLPFWHGEGVGRSAALGEAIGRFLREVDQGAPLTDT-----LDEHARHNIQT 655 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 LI EQ ATG++P R L++ERCRDE GDWR+ILHSPYG+RVH PWA+A+A RI + G Sbjct: 656 LIAEQHQATGVLPTDRALLIERCRDETGDWRVILHSPYGQRVHAPWALAVADRIARVMGI 715 Query: 728 DASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 D +VVASDDGIVAR PD+DG++P A +FLF P++L ++V AVG SALFAARFRECAARA Sbjct: 716 DPAVVASDDGIVARFPDSDGRVPGAELFLFAPDELQRVVNHAVGQSALFAARFRECAARA 775 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 LL+P R PG R+PLWQQRLRA QLLE+A+ + DFP+++ET RECLQDVYDLPAL RLM R Sbjct: 776 LLLPRRNPGQRSPLWQQRLRAGQLLEVARQFDDFPILIETARECLQDVYDLPALHRLMAR 835 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ 907 L GEIQ++DVTT +PSPFA LLFGYVAEFMY SDAP AERRAS+L+LDS+LL+ LLG+ Sbjct: 836 LQRGEIQLADVTTESPSPFAAPLLFGYVAEFMYASDAPQAERRASMLALDSKLLKRLLGE 895 Query: 908 VDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEV 967 VD ELLD ++ +VE+ELQRL G A E L DLLRE+GP+T +LA R++G + + Sbjct: 896 VDMRELLDTTLVARVEQELQRLPAGYHATSIEALSDLLREVGPLTDAELALRYSGDAP-L 954 Query: 968 ASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDL 1027 A L+ L +RIF I+ Q+R A +DA+RLRDALG +P++LP L V+ PL DL Sbjct: 955 AEGLQALQLAQRIFSVRIADQQRWALAEDASRLRDALGCHVPDTLPPALLQPVTRPLYDL 1014 Query: 1028 FLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL-------QQDIWVSDEV 1080 RY R HAL TA +LAH F LG+A+V + L +LR+QG V+ ++ WV++ V Sbjct: 1015 LHRYARTHALFTASELAHHFGLGVAVVADALGELRQQGKVIKGDFTPSDDEEPQWVAENV 1074 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 FRRLRLRSLQAAR+AT+PV Y LLLERQGV+ + G + GV+GV+ Sbjct: 1075 FRRLRLRSLQAARDATKPVDPAVYVALLLERQGVVSDASARQ------TQGAFSGVNGVV 1128 Query: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALH 1200 RVIEQLAG+ LPA+LWE+ ILP RVRDY MLDELL++G V+W GQ+ G +GLV+LH Sbjct: 1129 RVIEQLAGIALPAALWETHILPVRVRDYQPAMLDELLSSGEVVWHGQRAPGAAEGLVSLH 1188 Query: 1201 LQEYAAESFTPAEADQA-NRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQ 1259 L EYAAE+ PA+ + + LQ I+ +L DG WF +Q+ R+ +S D + + Sbjct: 1189 LSEYAAETLPPADEGKTIALTPLQHQILTLLQDGSGWFVRQLIPRLAQ---DSPDPALIY 1245 Query: 1260 EALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSP-RVSYNT 1318 +A+W L W+G +T+D W+ LR++T ++ R R R RRG YA P S Sbjct: 1246 QAMWDLAWRGYLTTDTWSALRSVTGHVNSPRPRPARPSRHRRGHAGYAAPASRIASGPGL 1305 Query: 1319 PNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSME 1378 ++AGRWSLL + DTER LAL ENMLDR+ ++SR A IAE +PGGFP++Q + R +E Sbjct: 1306 TSMAGRWSLLARSAIADTERALALTENMLDRFAVVSRGAAIAEQVPGGFPALQPVLRGLE 1365 Query: 1379 DSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLP 1438 DSGR++RGRFV G+G AQFA+ IDRLR LA+ Q +PVAL+ DPAN +G LP Sbjct: 1366 DSGRVLRGRFVAGMGAAQFADHTVIDRLRQLASH--QRLTGSPVALAVLDPANPFGVQLP 1423 Query: 1439 WPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE-VFHALTTALR 1497 WP A PTRR GALVV+ G++LLYL QGGK+++ + L AL AL+ Sbjct: 1424 WPLSLAGNRPTRRHGALVVIGHGRVLLYLPQGGKELMTFASAATLDEQHAAVLALGAALK 1483 Query: 1498 REPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 RE L FTL V+D P Q+P+ L+EAGFS P+G W Sbjct: 1484 REKHLSFTLERVDDQPAGQSPLLAALKEAGFSRVPRGYSW 1523 >UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomycetales RepID=B2HDY0_MYCMM Length = 1539 Score = 1509 bits (3906), Expect = 0.0, Method: Composition-based stats. Identities = 723/1580 (45%), Positives = 943/1580 (59%), Gaps = 90/1580 (5%) Query: 2 ADNPDPSSLLP-DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 P+P P FS TR+WF F PT Q W A ++ LVIAPTGSGKTLA Sbjct: 3 TARPEPLGPEPLGRFSAITREWFTNTFAAPTPAQASAWAAIAAGDNTLVIAPTGSGKTLA 62 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL+ALD L R + +R+LY+SP+KAL DV+RNL+ PL G+ RRG Sbjct: 63 AFLWALDSLAR-------CPDRTAGTRVLYVSPLKALAVDVERNLRTPLAGLTRLAERRG 115 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 + VG+R+GDTP R +L PPD+LITTPESL+LMLTS ARETL GV+TVI+DE Sbjct: 116 LPPPQISVGVRSGDTPPAVRRQLITRPPDVLITTPESLFLMLTSAARETLAGVQTVIVDE 175 Query: 181 VHAVAGSKRGAHLALSLERLD-----ALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 +HA+A +KRGAHLALSLERLD AQRIGLSATVR ++A FL G P T+ Sbjct: 176 IHAIAATKRGAHLALSLERLDQLAPDRRAGPPAQRIGLSATVRPPEELARFLSGSAPTTI 235 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 V P + + + + VPVA+M ++++ +IWP +E+ ++D + H ST Sbjct: 236 VAPHSAKTFDLTVQVPVADMANLAN--------------NTIWPDVESRLVDLIESHNST 281 Query: 296 IVFTNSRGLAEKLTARLNELYAARL--QRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 IVF NSR LAE+LTARLNE++A R A S + + +AR Sbjct: 282 IVFANSRRLAERLTARLNEIHAERSGMTLPSEANTQVAGGAPAQIMASGQTFGAATLLAR 341 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 +HHGSVSKEQRA E+ LK G L+ VVATSSLELGIDMGAVDLVIQV P SVASGLQRI Sbjct: 342 AHHGSVSKEQRAQVEEDLKRGALKAVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRI 401 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GRAGHQVG VS+G+ FP+ R DL+ A+ V+ M G++E + P NPLD+LAQ TVAAAA Sbjct: 402 GRAGHQVGEVSRGVLFPKHRTDLLGCAISVQRMRTGQIETMRVPANPLDILAQHTVAAAA 461 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 ++ L D+W+ VRR+A + LPR VF+ATLD+LSG+YPS +F+ RP+LV++R TG LT Sbjct: 462 LEPLDADQWFDTVRRSASFATLPRSVFEATLDLLSGKYPSTEFAELRPRLVYDRGTGTLT 521 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGAT 593 ARPGAQ LAVTSGG IPDRG+++V L EK RVGELDEEMVYESR D+I+LGAT Sbjct: 522 ARPGAQRLAVTSGGAIPDRGLFTVYLASEAEKPS--RVGELDEEMVYESRPGDVISLGAT 579 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGT 651 SWRI +IT D+V+V PAPG ARLPFWRG+ GRPAELG +G LA D A F Sbjct: 580 SWRITEITHDRVLVIPAPGEPARLPFWRGDDVGRPAELGAALGALTGELARLDRAEFDKR 639 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 ++ N+ GL+++Q+ AT +VP L++ER RDE+GDWR+ILHSPYG RVH Sbjct: 640 CAGLGFDDFATDNLWGLLDDQKTATRVVPTDTTLLVERFRDELGDWRVILHSPYGLRVHG 699 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK-----LPDAAIFLFEPEKLLQIV 766 P A+A+ R+ +G D ASDDGIV R+PDT P A +FLF+ +++ IV Sbjct: 700 PLALAVGRRLRDRYGLDEKPTASDDGIVVRLPDTISDTGTETPPGAELFLFDADEIDAIV 759 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILE 826 VG+SALFA+RFRE AARALL+P R PG R+PLW QR RA+QLL++A+ YPDFP++LE Sbjct: 760 TAEVGASALFASRFRESAARALLLPRRHPGRRSPLWHQRQRAAQLLDVARKYPDFPMVLE 819 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 T+RECLQDVYD+P L LM + +++++ TT PSPFA SLLFGYV FMY+ D PL Sbjct: 820 TVRECLQDVYDVPTLTTLMTDIAQRRVRVAETETTKPSPFAASLLFGYVGAFMYEGDVPL 879 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 AERRA+ LSLDS LL LLG+V+ ELLDP+VI +LQ L R A+ EG+ DLLR Sbjct: 880 AERRAAALSLDSTLLAELLGRVELRELLDPEVIAATGRQLQHLCADRAARDAEGVADLLR 939 Query: 947 ELGPMTVEDLAQRHT-GSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALG 1005 LGP+T +++A R ++ +LE L A +R +G+ ++D RLRD +G Sbjct: 940 LLGPLTEDEVAARSDTTGGTDIGGWLEGLRAARRALEVSYAGRSWWVAVEDIGRLRDGVG 999 Query: 1006 VRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQG 1065 +P LP + V+ PL +L RY R H T + A F LG+ + + L +L G Sbjct: 1000 AAVPVGLPAAFTEAVADPLAELLGRYARTHPPFTTAEAAGRFGLGLRVTADVLGRLASDG 1059 Query: 1066 LVMNLQQ-----------DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGV 1114 ++ + W EV R LR RSL A R PV+ Y R L E V Sbjct: 1060 RLVRGDFVATGVFGGAGSEQWCDAEVLRILRRRSLAALRAQVEPVSTAAYGRFLPEWHQV 1119 Query: 1115 LPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLD 1174 A G+D + VI+QLAGV +PAS E +L RVRDYS MLD Sbjct: 1120 GGADSSHG------------GIDRLASVIDQLAGVRIPASALEPLVLAPRVRDYSPAMLD 1167 Query: 1175 ELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGG 1234 ELLATG V W+G + DG V LHL + A + A + +AI+ LA GG Sbjct: 1168 ELLATGEVTWAGAGSISGSDGWVTLHLADSAPLTL--AAPAEIEFGEAHRAILDTLAGGG 1225 Query: 1235 AWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN--ARTS 1292 A+F +Q+ IG+ D +A++ ALW L+W G + D +AP+RAL + S Sbjct: 1226 AYFFRQL-------IGDIPDEAAIKAALWELIWAGRVCGDTFAPVRALLGGGGPGSRKRS 1278 Query: 1293 TRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGI 1352 R R + P +AGRWSLL + T R AE +L+R+G+ Sbjct: 1279 APAHRGHRPPRLSRYSVAHAQPRSVDPTVAGRWSLLPPPEPDSTVRAHYQAELLLNRHGV 1338 Query: 1353 ISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQ 1412 +++ AV +E +PGGF ++ + + ED+GR RG FVE LGGAQFA T+DRLR Sbjct: 1339 LTKGAVASEGVPGGFATLYKVLSAFEDAGRCQRGYFVESLGGAQFAVAATVDRLRSYLDD 1398 Query: 1413 A-----TQTRHYTPVALSANDPANVWGNLLPWPAHPA-----TLVPTRRAGALVVVSGGK 1462 ++ Y V L+A DPAN +G LPWP P R+AGALVV+ G Sbjct: 1399 PSAFTDSRRPQYQAVLLAAADPANPYGAALPWPTSDDDGSNVGARPGRKAGALVVLVDGA 1458 Query: 1463 LLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQ------ 1516 L +L +GG+ +L + + E A R + +N +PV Q Sbjct: 1459 LAWFLERGGRTLLTFTDDPEANAAAAIALADLVATR-RVGSLLVERINGVPVLQAGAGQA 1517 Query: 1517 TPMFTLLREAGFSSSPQGLD 1536 + T L +AGF +P+GL Sbjct: 1518 SLAVTALADAGFLRTPRGLR 1537 >UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium glutamicum RepID=Q8NS36_CORGL Length = 1520 Score = 1508 bits (3904), Expect = 0.0, Method: Composition-based stats. Identities = 704/1556 (45%), Positives = 952/1556 (61%), Gaps = 88/1556 (5%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 + + F P +WF F PT VQ TW ++ ++ALV+APTGSGKTLAAFL+ALD Sbjct: 2 AKSILSRFRPQVAEWFRDVFASPTPVQEGTWEAVSKGKNALVVAPTGSGKTLAAFLWALD 61 Query: 68 RLFREGGE-----DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L + G+ T + ++LYISP+KALG DV+ NL+ PL GIA R G Sbjct: 62 SLTEQTGQQVLDTGTPVPVRGGKVKVLYISPLKALGVDVENNLRAPLTGIARTASRMGLD 121 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVH 182 N+ V +R+GDTP+ ER++ R PPDILITTPES YLMLTS+A TL V+ VIIDE+H Sbjct: 122 VPNITVAVRSGDTPSAERARQVRKPPDILITTPESAYLMLTSKAGATLSDVDVVIIDEIH 181 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 A+AG+KRG HLAL+LERL+ L+ QR+GLSATVR VA FLGG RPV +V PPA + Sbjct: 182 AMAGTKRGVHLALTLERLEKLVGRPVQRVGLSATVRPLETVAGFLGGGRPVEIVAPPAEK 241 Query: 243 HPQIRIVVPVANMDDVSSVASG-------------TGEDSHAGREGSIWPYIETGILDEV 289 + + VPV +M D+ G +S +GSIWP+IE + ++V Sbjct: 242 KWDLTVTVPVEDMSDLPVQEPGSTIGELVMDDPLGITGESALPTQGSIWPHIEQQVYNQV 301 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV 349 + +STIVF NSR AE+LT+RLNE++A + + Sbjct: 302 MSAKSTIVFVNSRRSAERLTSRLNEIWAMEHDPESLSPQLRRDPAQIMSSAD-VAGKAPQ 360 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASG 409 IAR+HHGSVSK++RA TE LK G LR V++TSSLELGIDMGAVDLVIQV +P SVASG Sbjct: 361 VIARAHHGSVSKDERATTETMLKEGRLRAVISTSSLELGIDMGAVDLVIQVESPPSVASG 420 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 LQR+GRAGH VG S G F+P+ R DLV +AV V+ M G +E + P N LDVLAQQTV Sbjct: 421 LQRVGRAGHTVGATSIGSFYPKHRSDLVQTAVTVQRMKEGLIEEIHVPKNALDVLAQQTV 480 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 AA ++ +QVDEWY +R+A P++DL R VFD+ +D++SG YPS DF+ +P++V++R + Sbjct: 481 AAVSIKDVQVDEWYETIRKAYPYRDLAREVFDSVIDLVSGVYPSTDFAELKPRVVYDRVS 540 Query: 530 GILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIIT 589 G+L RPG+Q +AVTSGGTIPDRGM+ V L G RRVGELDEEMVYESRV D+ T Sbjct: 541 GVLEGRPGSQRVAVTSGGTIPDRGMFGVFLVG----DGPRRVGELDEEMVYESRVGDVFT 596 Query: 590 LGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS 649 LGA+SWRI++ITRDQV+VTPAPG + RLPFW G+ GRPAELG+ +G F S Sbjct: 597 LGASSWRIEEITRDQVLVTPAPGHTGRLPFWTGDAAGRPAELGKALGAFRRSTLTDPSSS 656 Query: 650 GTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRV 709 E N+ ++EQ +TG++P + LVLER +DE+GDWRI+LH+PYGR V Sbjct: 657 ------GLEGWAHDNLIAFLQEQEESTGVLPDEKTLVLERFKDELGDWRIVLHTPYGRGV 710 Query: 710 HEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREA 769 + WA+A+ +I G DA VA DDGIV R+P+ D P AA+F+FE E++ +V E Sbjct: 711 NAAWALAVGAKIAEETGMDAQAVAGDDGIVLRLPEGDED-PSAALFMFEAEEIETLVTEQ 769 Query: 770 VGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLR 829 VG+SALFA+RFRECAARALL+P R PG R PLWQQR RA+QLL++A+ YP FP+ILET+R Sbjct: 770 VGNSALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVR 829 Query: 830 ECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAER 889 ECLQDVYDLPAL+ L+ L +++I++VTT PSPFA++LLF Y FMY+ D+PLAE+ Sbjct: 830 ECLQDVYDLPALKNLIEDLQLRKVRIAEVTTQQPSPFASALLFNYTGAFMYEGDSPLAEK 889 Query: 890 RASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELG 949 RA+ L+LD LL LLG+V+ +LLDP +I +V ++L+R R A+ E L D LR LG Sbjct: 890 RAAALALDPALLAKLLGEVELRQLLDPDIIAEVHQQLRRQG-DRAARNNEELADSLRILG 948 Query: 950 PMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLP 1009 P+ +++L + T + ++ R I+G+E LA + DA LRDALGV +P Sbjct: 949 PIPLDELGEHITFENPDLED---------RAMTVRINGREHLAQVLDAPLLRDALGVPVP 999 Query: 1010 ESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQL-REQGLVM 1068 +P + ++ L L R++R TA LA F LGIA LQ +G Sbjct: 1000 PGVP-AQVETITDALEQLVNRWVRTRGPFTANDLAEAFGLGIATAITALQSAPVIEGRYR 1058 Query: 1069 NL-QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAS 1127 + + EV +R RSL AAR+ TRPV+ + +AR LL+ Q + P Sbjct: 1059 QGVDVQEYCATEVLSIIRRRSLAAARKQTRPVSQSAFARFLLDWQQIAPVG--------- 1109 Query: 1128 TSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQ 1187 + GVDG VIEQLAGV LPAS WE +LP RV DYS LDEL + G V+ G Sbjct: 1110 -ATPELRGVDGTYTVIEQLAGVRLPASAWEDLVLPRRVADYSPIHLDELTSNGEVLIVGA 1168 Query: 1188 KKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRD 1247 + G D ++L +YAA+ + S LQ A++ L GGA+ I + Sbjct: 1169 GQAGSRDPWISLLPVDYAAQLV---GEASTSMSPLQDAVLDQLRAGGAFLFSDILEENFG 1225 Query: 1248 KIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYA 1307 + LQEA+W LV G+++ D +AP+RA S + A + RR R+R Sbjct: 1226 YT-----TAQLQEAMWGLVEAGLVSPDSFAPIRARLASGTTAHRAKRRPARSR------L 1274 Query: 1308 QPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGF 1367 + + S P++ GRW+L V+P + T R +A E LDRYG+++R +V+AE+I GGF Sbjct: 1275 RTRTSFASDVPPDMRGRWTL-SVQPADATSRSVAHGEGWLDRYGVLTRGSVVAEDIVGGF 1333 Query: 1368 PSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYTP 1421 + E+SG+ MRG F+EGLG AQF+ IDRLR D+ + Sbjct: 1334 ALAYKVLSGFEESGKAMRGYFIEGLGAAQFSTPAIIDRLRGHDDSPDVEGWPSGATDPDV 1393 Query: 1422 VALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE 1481 ++A DPAN +G LPWP P+R AGA+VV+ G LL +L +GG+ + V+ + Sbjct: 1394 YLIAAADPANPYGAALPWPEQG----PSRAAGAMVVLCDGLLLAHLTRGGRTLTVFSDN- 1448 Query: 1482 ELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDW 1537 P++ AL T R T+ ++N V +P+ R+ G + +P+G+ + Sbjct: 1449 ---IPKIATALIT------YERLTVEKINGDNVFDSPLLEQFRKHGATITPKGMRF 1495 >UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacteria RepID=A6W838_KINRD Length = 1584 Score = 1499 bits (3882), Expect = 0.0, Method: Composition-based stats. Identities = 725/1601 (45%), Positives = 957/1601 (59%), Gaps = 90/1601 (5%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A + FS ATR WF AF PT Q W +R +HALV+APTGSGKTL+A Sbjct: 5 ASPDLDQQEVLGRFSEATRAWFTGAFAAPTPAQLGAWDAVSRGQHALVVAPTGSGKTLSA 64 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL+ALD L E + K R+LY+SP+KAL DV+RNL+ PL GI +R G Sbjct: 65 FLWALDGLAGEPVPE----DKDHRCRVLYVSPLKALAVDVERNLRSPLTGIRQAAQRLGL 120 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEV 181 +RVG+R+GDT +ER TR PPD+LITTPESL+L+LTS+ARE LRGV TV++DEV Sbjct: 121 PVPEVRVGVRSGDTSQEERRGFTRTPPDVLITTPESLFLLLTSKAREQLRGVRTVVLDEV 180 Query: 182 HAVAGSKRGAHLALSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 HA+AGSKRGAHLALSLERLDAL+ QR+GLSATVR VA ++ G RPVT+V Sbjct: 181 HAMAGSKRGAHLALSLERLDALVQAAGGEPTQRVGLSATVRPVQTVAEWVSGGRPVTIVQ 240 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHA-------GREGSIWPYIETGILDEVL 290 PP+ + +R+VVPV +M D+ + G + R SIWP++E I+D V Sbjct: 241 PPSTKEFDLRVVVPVEDMSDLDASGRGAEDPDDLTGQASGGARRASIWPHVEERIVDLVA 300 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVF 350 HRST+VF NSR L+E+LTARLNE++ RL A + + + Sbjct: 301 EHRSTLVFANSRRLSERLTARLNEVWDERLNP-EEPDGAAPAPPAQLMGQAGTGTGAPAV 359 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGL 410 +AR+HHGSVSKEQR++ E+ LK+G L VVATSSLELGIDMGAVDLV+QV +P SVASGL Sbjct: 360 LARAHHGSVSKEQRSLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGL 419 Query: 411 QRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 QR+GRAGHQVG VS+G+ FP+ R DL+ +AV+VE M GR+E L P NPLDVLAQQ VA Sbjct: 420 QRVGRAGHQVGAVSRGVLFPKFRGDLLQTAVVVERMRDGRIEELHVPANPLDVLAQQIVA 479 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETG 530 AMD V + + +RAAP+ L R V DA LDMLSGRYPS +F+ RP+LVW+R T Sbjct: 480 MVAMDEWTVPDLLALAQRAAPFATLSRAVLDAVLDMLSGRYPSDEFAELRPRLVWDRVTE 539 Query: 531 ILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITL 590 LT RPGAQ LAVTSGGTIPDRG+++V L GE RRVGELDEEMVYESRV D+ITL Sbjct: 540 TLTGRPGAQRLAVTSGGTIPDRGLFAVFLATGE--GPGRRVGELDEEMVYESRVGDVITL 597 Query: 591 GATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA------D 644 G+++WR++ IT D+V+VTPAPG+ RLPFW GE GRPAELG +G+F+ L Sbjct: 598 GSSAWRVEDITHDRVLVTPAPGQPGRLPFWHGEALGRPAELGRALGEFVRELGGLDGGFA 657 Query: 645 GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSP 704 G + ++ N+ + EQ+ AT VP + +V+ER RDE+GDWRI +HSP Sbjct: 658 GEPARERVRAAGLDDWATGNLLAYLTEQQEATRHVPDDQTIVVERFRDELGDWRICIHSP 717 Query: 705 YGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK----LPDAAIFLFEPE 760 +G +VH PWA+A+ R+ +G D + +DDGIV R+PD D A + E Sbjct: 718 FGGQVHSPWALALGARMRERFGVDVQAMPADDGIVLRLPDLDLPEGQSPDVADLVALEAS 777 Query: 761 KLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPD 820 ++ +IV +G SALFA+RFRECAARALL+P R PG R PLWQQR RA+ LLE+A + Sbjct: 778 EVAEIVTAEIGGSALFASRFRECAARALLLPRRQPGKRQPLWQQRQRAASLLEVASRFAS 837 Query: 821 FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMY 880 FP++LET+RECL DV+D+ LERLM L ++++ +V + PSPFA L+FGYVA+F+Y Sbjct: 838 FPIVLETVRECLSDVFDVTGLERLMTDLAARKVRVVEVESQQPSPFARGLMFGYVAQFLY 897 Query: 881 QSDAPLAERRASVLSLDSELLRNLLGQVD---PGELLDPQVIRQVEEELQRLAPGRRAKG 937 + D+PLAERRA+ L+LD LL LLG+ + +LLDP+ +++ E+ELQRL P RR Sbjct: 898 EGDSPLAERRAAALALDPSLLAELLGRGEGAALRDLLDPEAVQRTEDELQRLVPERRCAD 957 Query: 938 EEGLFDLLRELGPMTVEDLAQRHTGSSE-----------EVASYLENLLAVKRIFPAMIS 986 E + DLLR LGP+T ++ R EVA +L L +R+ I+ Sbjct: 958 AEDVADLLRVLGPLTTAEVVVRSGRGEPGSQGPAALPEGEVARWLVGLEEARRLIRVRIA 1017 Query: 987 GQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHE 1046 G+E A ++DA RLRD LG LP +PE + V+ PL LF RY R T +A Sbjct: 1018 GEEHWAVIEDAGRLRDGLGTPLPVGIPEAFTEPVADPLAGLFGRYARTRGPFTVLDVAAR 1077 Query: 1047 FSLGIAIVEEQLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVA 1100 F +G A+ + L++L+ G ++ + + +V R LR RSL A R PV Sbjct: 1078 FGVGRAVAHDALRRLQSAGRLVEGELRPGGTGLEFCDADVLRILRRRSLAALRADVEPVP 1137 Query: 1101 ATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQI 1160 AR L QGV GVDGV+R +EQLAG +PAS E + Sbjct: 1138 PRDLARFLPAWQGVSTGLRS-----------RLRGVDGVLRAVEQLAGAVVPASAVEPLV 1186 Query: 1161 LPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFT-PAEADQANR 1219 L ARV YS MLDEL A G V+WSG L DDG V+LH + A + P +++ Sbjct: 1187 LAARVEGYSPAMLDELTAAGEVVWSGHGSLPGDDGWVSLHPADLAPLTLPDPRDSEIDLD 1246 Query: 1220 SALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPL 1279 + L +A++ LA GGA+F + +S + D L LW LVW G +T+D APL Sbjct: 1247 TELHRAVLDALAGGGAYFFRALSDAVGST-----DDPGLTSVLWDLVWAGRLTNDTLAPL 1301 Query: 1280 RALTRSSSNARTSTRRSHRA-----RRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLN 1334 R + R R + V P+ AGRWSLL + Sbjct: 1302 RNRLGGRGAHKPRAAAPRSRYARTARPARGLRGTRVELPSRSGPPSAAGRWSLLPEIEAD 1361 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 T R A AE +LDR+G+++R AV +E +PGGF ++ + + ED+GR RG FVEGLG Sbjct: 1362 ATVRAHASAEVLLDRHGVLTRGAVASERVPGGFAAVYRVLAAFEDAGRARRGYFVEGLGA 1421 Query: 1395 AQFAERLTIDRLRDL-----------ATQATQTRHYTPVALSANDPANVWGNLLPWPAHP 1443 +QFA +DRLRD ++ + V L+A DPAN +G LPWP P Sbjct: 1422 SQFATTGAVDRLRDSARPVGGDSPSQRRESRRDAGPGAVVLAATDPANPYGAALPWPERP 1481 Query: 1444 ------ATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 + P R+AGALVVV G L+LY+ +GG+ +L W + E L P AL ++R Sbjct: 1482 EVTAGASGHRPGRKAGALVVVVDGDLVLYVERGGRSVLSWTQDPETLQPAA-DALALSVR 1540 Query: 1498 REPRLRFTLTEVNDLPVRQ--TPMFTLLREAGFSSSPQGLD 1536 + T+ + + V Q +P+ L AGF ++P+GL Sbjct: 1541 DGVLGKLTVEKADGSGVLQADSPLAQALESAGFHATPRGLR 1581 >UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AY23_STRRD Length = 1620 Score = 1490 bits (3857), Expect = 0.0, Method: Composition-based stats. Identities = 726/1643 (44%), Positives = 939/1643 (57%), Gaps = 156/1643 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F+P TRDWF AF PTA Q W AR ++ LV+APTGSGKTLAAFL++LDRL E Sbjct: 12 DHFTPVTRDWFTGAFASPTAAQEGAWASIARGDNTLVVAPTGSGKTLAAFLWSLDRLAAE 71 Query: 73 GGEDTREAHKR---------------KTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T + R+LY+SP+KAL DV+RNL+ PL G+ R Sbjct: 72 RAAATGGPAEDAAGGRRRSREDDAPAGQCRVLYVSPLKALAVDVERNLRAPLAGMRQTAR 131 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVI 177 R G + V IR+GDT QER + P DILITTPESL+L+LTS+ARE LRGVETVI Sbjct: 132 RLGLAVPEISVAIRSGDTSPQERRRFAARPSDILITTPESLFLLLTSQAREALRGVETVI 191 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +DEVHAVA +KRGAHLALSLERLDALL AQRIGLSATVR ++VAAFLGG RP V+ Sbjct: 192 VDEVHAVAATKRGAHLALSLERLDALLPQPAQRIGLSATVRPVNEVAAFLGGPRPAAVIQ 251 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDS------HAGREGSIWPYIETGILDEVLR 291 PP+ + ++++VVP+ +M ++ S + D SIWP++E + D + Sbjct: 252 PPSEKTIEVKVVVPIEDMTELDSAPRPSRPDDDDQWLLEPPARRSIWPHVEERLFDLIEE 311 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSI---------------AVDAAHFEST 336 H STIVF NSR LAE+L RLNEL R + + Sbjct: 312 HSSTIVFANSRRLAERLCTRLNELAWERRAGEAEPPEPSEPAHWAGGFPAPPASLSTPAA 371 Query: 337 SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 A + + + I R+HHGSVSKE+R+ E+ALKSG L VVATSSLELGIDMGAVDL Sbjct: 372 MMAQAGAAKGTVPEIVRAHHGSVSKEERSQIEEALKSGRLPAVVATSSLELGIDMGAVDL 431 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTP 456 V V +P SVASGLQRIGRAGHQVG VS+G+ FP+ R DLV +AV+ E M +G +E L Sbjct: 432 VACVESPPSVASGLQRIGRAGHQVGAVSRGVIFPKYRGDLVQTAVVAERMKSGEIEELRY 491 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 P NPLDVLAQQ VA A+D VD+ + VRRAAP++ LPR +ATLDML+GRYPS +F Sbjct: 492 PRNPLDVLAQQIVAMTALDEWTVDDLETLVRRAAPYRTLPRGALEATLDMLAGRYPSEEF 551 Query: 517 SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 + RP++VW+R TG L RPGAQ LAVT+GGTIPDRG++ V L + RVGELDE Sbjct: 552 AELRPRVVWDRVTGTLRGRPGAQRLAVTNGGTIPDRGLFGVFLVGEKAS----RVGELDE 607 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 EMVYESR D+ LGATSWRI+ IT D+V+V+PAPG+ +LPFW G+ GRPAELG IG Sbjct: 608 EMVYESRAGDVFVLGATSWRIEDITADRVLVSPAPGQPGKLPFWHGDNAGRPAELGRAIG 667 Query: 637 DFLHLL-------------------------------------------ADGAFFSGTIP 653 FL + D A G Sbjct: 668 AFLREMSGAGSGAGPGSGRKGGLARDAARPGSAEPGDPAGDGTRPGPGREDPARDGGKPG 727 Query: 654 PWLAEENTIANIQGLIE-----------------EQRNATGIVPGSRHLVLERCRDEIGD 696 ++ I EQR ATG VP R L++ER DE+GD Sbjct: 728 SAGQDDPARDGAMERIRAAGLDEFAAANLLSYLAEQRQATGYVPDDRTLLVERFHDELGD 787 Query: 697 WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFL 756 WR+++HSPYG RVH PWA+AI R+ +G D V SDDGIV RIPDT P + Sbjct: 788 WRVVVHSPYGARVHAPWALAIGRRLRERYGVDVQAVHSDDGIVLRIPDTLSGPPSDV-AV 846 Query: 757 FEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQ 816 F+ E++ QIV E +G SALFAARFRECA R+LL+P RTPG RTPLWQQR RAS LL +A Sbjct: 847 FDAEEIEQIVTEELGGSALFAARFRECAGRSLLLPRRTPGKRTPLWQQRQRASHLLNVAG 906 Query: 817 GYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVA 876 Y FPV+LET+RECLQDV+D+P L RLMR ++ +++ +V T+ SPFA SLLF YV Sbjct: 907 RYGSFPVVLETMRECLQDVFDVPGLIRLMRDISARRVRLVEVETSQASPFAASLLFNYVG 966 Query: 877 EFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAK 936 FMY+ DAPLAERRA L+LD+ LL LLGQ D ELLDP VI E EL RL R + Sbjct: 967 AFMYEGDAPLAERRAQALALDTSLLAELLGQADLRELLDPDVIADTERELARL--DRPLR 1024 Query: 937 GEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDD 996 E L DLLR GP+ D++ R E ++L L + +R ++GQE+ A ++D Sbjct: 1025 DAEDLADLLRSHGPLLAADVSLR-----EGDPAWLTGLESARRAIRVRVAGQEQWAAIED 1079 Query: 997 AARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEE 1056 AARLRDALGV LP +P +L V PL DL R+ R A A F LG A+V + Sbjct: 1080 AARLRDALGVPLPVGVPHTFLEPVDDPLGDLVARHARTRTPFPASTAAARFGLGPAVVTD 1139 Query: 1057 QLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLE 1110 L++L G V++ + + W V R LR RSL R+ PV+ T A Sbjct: 1140 TLRRLAVSGRVVSGEFRPGGRGEEWCDAGVLRMLRRRSLARLRKEVEPVSPETLAVFAPA 1199 Query: 1111 RQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSS 1170 G+ A +D ++ +EQL G +PAS E+ +LP+RV Y Sbjct: 1200 WHGISGAPQRGRPP-----------IDALVSAVEQLQGAAVPASALETLVLPSRVPGYDP 1248 Query: 1171 EMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVL 1230 +LDEL ++G V+W+GQ L DG VAL+ + A + + + L +A++ VL Sbjct: 1249 SLLDELTSSGEVLWAGQGSLPGGDGWVALYFADTAPLLMP--DPVEITMTPLHEAVLEVL 1306 Query: 1231 ADGGAWFAQQISQRIRDKIGES-VDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 + GGA F ++++ R+ + D L A+W LVW G IT D APLRA + A Sbjct: 1307 SGGGALFFRELAGRVGSLMAGPVPDDGMLTAAVWDLVWAGRITGDTLAPLRATLGTGRPA 1366 Query: 1290 RTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDR 1349 + P + GRW LL + T+R A AE +L+R Sbjct: 1367 HRPA----------TTRRRRPVLPTRSGPPTVGGRWWLLPGVADDPTQRAHAQAEALLER 1416 Query: 1350 YGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDL 1409 +G+++R AV AE +PGGF ++ + R+ E+SGR RG FVEGLGGAQFA +DR+R Sbjct: 1417 HGVVTRGAVAAERLPGGFAAVYQVLRAFEESGRCRRGYFVEGLGGAQFALPGAVDRMRAA 1476 Query: 1410 ATQA--------------TQTRHYTPVALSANDPANVWGNLLPWPAHPA--TLVPTRRAG 1453 AT + V L+A DPAN +G LPWPAHP + P R+AG Sbjct: 1477 ATPPRSEAPGPDPWSSRRPEGNGRRAVVLAAADPANPYGAALPWPAHPGEISHKPGRKAG 1536 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLP 1513 +LVV+ G L+LY+ +GGK +L + + + AL A+R + T+ + Sbjct: 1537 SLVVLVDGHLVLYVERGGKTLLSFTDDD--RLQPAVDALALAVRDGALGKLTVERADGTA 1594 Query: 1514 VRQTPMFTLLREAGFSSSPQGLD 1536 + +P+ L AGF +P+GL Sbjct: 1595 INDSPLGAALEAAGFHPTPRGLR 1617 >UniRef50_C0XQ89 Lhr family helicase n=2 Tax=Corynebacterium RepID=C0XQ89_9CORY Length = 1529 Score = 1474 bits (3815), Expect = 0.0, Method: Composition-based stats. Identities = 676/1562 (43%), Positives = 906/1562 (58%), Gaps = 90/1562 (5%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 ++ + D F P WF F PTAVQ W + E+ALV+APTGSGKTLAAFL++L+ Sbjct: 2 TASVLDRFHPQVATWFSEVFAAPTAVQEGAWRAISAGENALVVAPTGSGKTLAAFLWSLN 61 Query: 68 RLFREGGE-----DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L G+ D ++LYISP+KALG DV+ NL+ PL GIA +R G Sbjct: 62 SLVERAGQQALPIDGSARSTHGGVKVLYISPLKALGVDVENNLRAPLGGIARVAQRMGLD 121 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVH 182 ++ VG+R+GDTP ER++ R PPDILITTPESLYLMLTS+A L V+TVI+DE+H Sbjct: 122 TPDISVGVRSGDTPQAERNRQVRKPPDILITTPESLYLMLTSKAAGILTSVDTVIVDEIH 181 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 A+AG+KRG HLALSLERL + QRIGLSATVR +VA FLG T+VNPPA + Sbjct: 182 ALAGTKRGVHLALSLERLRRITGP-FQRIGLSATVRPLEEVANFLG--PKTTIVNPPAEK 238 Query: 243 HPQIRIVVPVANMDDVSSVASGTG----------EDSHAGREGSIWPYIETGILDEVLRH 292 + + VPV ++ D+ + + + G SIWP+IE + D+V+ H Sbjct: 239 KWSLGVHVPVEDLSDLPVPEEASTIGEAVVDDLLDPAPVGASKSIWPHIERAVYDKVMAH 298 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 RSTIVF NSR AE+LT++LNEL+AA + + IA Sbjct: 299 RSTIVFVNSRRTAERLTSQLNELWAAEHDPDALSPALRRPPAQLMKSVD-TAGHAQTLIA 357 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQR 412 R+HHGSVSKE+R TE LK G L+ V++TSSLELGIDMGAVDLVIQV +P SVASGLQR Sbjct: 358 RAHHGSVSKEERLTTETMLKEGTLKAVISTSSLELGIDMGAVDLVIQVESPPSVASGLQR 417 Query: 413 IGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA 472 +GRAGH VG S G F+P+ R DLV +AV V M AG +E L P +PLDVL QQT+AA Sbjct: 418 VGRAGHSVGETSVGAFYPKHRSDLVQTAVTVPRMRAGLIEELRTPLSPLDVLTQQTIAAV 477 Query: 473 AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGIL 532 A++ + VDEW+ VR A P+++L R VFDA +D++ G YPS DF+ +P+ + + +L Sbjct: 478 AVEDVDVDEWFDTVRAAWPYRNLSRDVFDAVIDLVVGVYPSTDFAELKPRAILD--GTVL 535 Query: 533 TARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 ARPGAQ +AVT+ GTIPDRGM+ V L E RRVGELDEEMVYESRV D+ TLGA Sbjct: 536 KARPGAQRVAVTNAGTIPDRGMFGVFLVGSE--GAPRRVGELDEEMVYESRVGDVFTLGA 593 Query: 593 TSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 +SWRI+ ITRDQV V+PAPG + RLPFW G+ GRP ELG+ +G+F G Sbjct: 594 SSWRIENITRDQVQVSPAPGHTGRLPFWTGDSLGRPYELGKALGEFRRQARSGPL----- 648 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 +E N+ ++EQ ATGI+P LVLER DE+GDWR++LH+P+G+ V+ Sbjct: 649 -DASLDEFARRNLIAYLDEQEEATGIIPDDTTLVLERFTDELGDWRVVLHTPFGKGVNAA 707 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 WA+A RI G DA VA DDGIV R+P + PD+++F F+ +++ IV VG+ Sbjct: 708 WALAAGWRISQETGMDAQAVAGDDGIVLRLPQGEK-EPDSSLFAFDADEITDIVTAQVGN 766 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 SALFA+RFRECAARALL+P R PG R PLWQQR RA QLL++A+ YP FP+ILET+RECL Sbjct: 767 SALFASRFRECAARALLLPRRNPGKRAPLWQQRQRAEQLLDVARNYPSFPIILETVRECL 826 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 QDVYDLPAL +M+ L I++++VTT PSPFA+SLLF Y FMY+ D PLAE+RA+ Sbjct: 827 QDVYDLPALREVMQHLQTRRIRVAEVTTDQPSPFASSLLFNYTGAFMYEGDTPLAEKRAA 886 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 LSLD LL LLG V+ ELLD +I +V+ L+R+ +A E D LR +GP+ Sbjct: 887 ALSLDPSLLAKLLGTVELRELLDADIIAEVDASLRRVG---KALTSEQFADTLRIVGPVP 943 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 +++L + + L R+ I G+ +A DA LRD LGV +P + Sbjct: 944 LDELDSYTSVPLVSLEEALGA-----RVMRVRIGGRSHIAQALDAPLLRDGLGVPVPPGV 998 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL-- 1070 + ++ L L R++R LA F L + L L + G V+ Sbjct: 999 -AAQVATINDALAQLVSRWVRTRGPFVLRDLADAFGLAVGAAYSALAPLLDSGKVIEGRY 1057 Query: 1071 ----QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFA 1126 + +V+ EV R +R RSL AAR TRPV+ + + R L V PA Sbjct: 1058 RQGVTEQEYVAAEVLRIIRSRSLAAARAQTRPVSQSAFGRFLPSWSHVAPAGQ------- 1110 Query: 1127 STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSG 1186 G DGV V+EQLAGV LPAS WES +LP+RV DYS MLDEL A+G + G Sbjct: 1111 ---VAALRGADGVYTVLEQLAGVRLPASAWESHVLPSRVGDYSPAMLDELTASGEISIVG 1167 Query: 1187 QKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIR 1246 K G D + L +YA + ++ + S Q ++ + GG + + Q Sbjct: 1168 AGKAGARDPWLMLLPTDYAGQLMP--DSTEPTMSLTQAQVMEKIRGGGGFLFTDLLQ--- 1222 Query: 1247 DKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVY 1306 + L+E++W LV G + D +AP+RA + A + RR R+R Sbjct: 1223 -----GTTVEELRESMWDLVEAGFVAPDSFAPIRARLSGGTTAHRAKRRPSRSR-----V 1272 Query: 1307 AQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGG 1366 + + P++ GRW+ + T R +A E LDRYG+++R +V+AE++ GG Sbjct: 1273 RTGRTSFATLTPPDMVGRWAATPGVDTDATRRSVAFGEAWLDRYGVVTRGSVVAEDVLGG 1332 Query: 1367 FPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR------DLATQATQTRHYT 1420 F + E+SG+ MRG +EGLG +QF+ TIDRLR D+ + TR Sbjct: 1333 FALAYKVLSGFEESGKAMRGYLIEGLGASQFSTPATIDRLRGHQDSDDVVGWPSGTREPL 1392 Query: 1421 PVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 L+A DPAN +G LPWPA PTR AGA+VV+ G L ++ +GGK M + E Sbjct: 1393 VYVLAATDPANPYGAALPWPAQG----PTRSAGAMVVLIDGLLAAHITRGGKTMTTFFEH 1448 Query: 1481 EELL----APEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 P V AL+ A+ + ++N LR+ G + + +G Sbjct: 1449 FPEGVGDPMPLVVSALSQAVAAGRMKPLNVQKLNGKAAFS------LRDYGAAVTHKGAK 1502 Query: 1537 WG 1538 G Sbjct: 1503 IG 1504 >UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia sp. EuI1c RepID=D1VBA8_9ACTO Length = 1675 Score = 1421 bits (3679), Expect = 0.0, Method: Composition-based stats. Identities = 741/1702 (43%), Positives = 951/1702 (55%), Gaps = 208/1702 (12%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 P S FS TR WF AF PT Q W ALV+APTGSGKTLAAFL++L Sbjct: 2 PDSDPLAAFSAPTRAWFQAAFPAPTPAQAGAWAAVRAGGSALVVAPTGSGKTLAAFLWSL 61 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 D L R G A + R+LY+SP+KAL DV RNL+ PL GI R G+T + Sbjct: 62 DELVRSGPP----ADPTRRCRVLYVSPLKALAVDVARNLRAPLAGIQAAATRLGQTVPEI 117 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 R+G+RTGDTPA ER R PPDILITTPESL+L+LTS+ARE LR VETVI+DEVHAVA Sbjct: 118 RIGMRTGDTPATERRAFGRTPPDILITTPESLFLVLTSQAREALRAVETVIVDEVHAVAS 177 Query: 187 SKRGAHLALSLERLDALLHTS-----------AQRIGLSATVRSASDVAAFLGGDRPVTV 235 +KRGAHLALSLERLDAL + A+RIGLSATVR +VA FLGG RPVTV Sbjct: 178 TKRGAHLALSLERLDALRTSESGGDPAPAAAPARRIGLSATVRPVEEVARFLGGTRPVTV 237 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVAS-------------------GTGEDSHAGREGS 276 V PPA + + +VVPV +M D + G + + S Sbjct: 238 VRPPARKTLLVDVVVPVRDMADPGAPDGLAGLTAPGGVSGLPTLESLADGPPAAEPAKPS 297 Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES- 335 IWP +E +LD + H STIVF NSR +AE+L ARLNEL+ RL + + +V Sbjct: 298 IWPAVEARVLDLIEAHTSTIVFANSRRVAERLCARLNELHTERLIAAENASVHRGGGRID 357 Query: 336 -------TSGATSNRVQSSDVF---------------------------IARSHHGSVSK 361 S+ + + +AR+HHGSVS+ Sbjct: 358 LDGPPAGPPDGQSDELDGPLGYHAEPTRVTPAEVMGAAGLARGSLPTAEVARAHHGSVSR 417 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 EQR + E+ LK+G L VVATSSLELGIDMGAVDLV+Q+++P SVA+G+QR+GRAGHQVG Sbjct: 418 EQRLLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQISSPPSVAAGMQRVGRAGHQVG 477 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 S+G+ P R DL+++AV+ E M G +E P NPLDVLAQQ VA A+D V E Sbjct: 478 VESRGVVLPSHRADLLEAAVVAERMRDGAIEEARYPRNPLDVLAQQIVAMTAVDTWPVAE 537 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 + VRRAAP+ LP F+A LDMLSGRYPS F+ RP++VW+R + RPGAQ L Sbjct: 538 LGALVRRAAPFATLPGGAFEAVLDMLSGRYPSDAFAELRPRIVWDRAANTVAGRPGAQRL 597 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT 601 AVTSGGTIPDRG++ V L + RVGELDEEMVYESRV D++ LG++SWRI++IT Sbjct: 598 AVTSGGTIPDRGLFGVFLVGEKAS----RVGELDEEMVYESRVGDVVLLGSSSWRIEEIT 653 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--GAFFSGTIPPWLAEE 659 D+V+VTPAPGR RLPFW G+ GRPAELG +G FL L + +E Sbjct: 654 PDRVLVTPAPGRPGRLPFWHGDSPGRPAELGRALGAFLRELTRKSPQDAEARLRQAGLDE 713 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 +N+ ++EQR A G + R LV+ER RDE+GDWR+ +HSP+G RV+ PWA+AIAG Sbjct: 714 WATSNLLAYLDEQREAAGRLSDDRTLVVERFRDELGDWRLAVHSPFGARVNAPWALAIAG 773 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 R+ +GA+ V+ +DDGIVAR+PD D A +F+P+++ +VR VG+SALFA+R Sbjct: 774 RLRERYGAEVQVMHTDDGIVARVPDADAAPGAAD-VVFDPDEIAAVVRTEVGASALFASR 832 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRECA RALL+P R+PG RTPLWQQR R++ LL +A G+ +FPV+LET+RECLQDV+D+P Sbjct: 833 FRECAGRALLLPRRSPGRRTPLWQQRQRSAALLSVAAGFENFPVVLETMRECLQDVFDVP 892 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 AL L R ++ +++ +V T PSPFA SLLFGYVA F+Y DAPLAERRA +LSLDS Sbjct: 893 ALVELHRDVDARRLRVVEVETPAPSPFARSLLFGYVATFLYDGDAPLAERRAQMLSLDSR 952 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 LL LLG+ D EL+DP + +VE EL RLAP RRA+ EG DLLR LG +T + R Sbjct: 953 LLAELLGETDLRELIDPTALAEVEAELARLAPDRRARDVEGAADLLRVLGDLTTAEALAR 1012 Query: 960 HTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHR 1019 +L L A R I+G+ER ++DA RLRDALGV LP +P + Sbjct: 1013 GAT-----EEWLRALAAAGRALEVRIAGEERWVAVEDAGRLRDALGVPLPMGVPTAFTEP 1067 Query: 1020 VSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QD 1073 V PL DL R+ R AE+LA F LG+++ L++L G ++ + + Sbjct: 1068 VRDPLGDLVSRFTRTRGPFDAEELAARFGLGVSVAVGALERLVGAGRLVRGELRPGRTGE 1127 Query: 1074 IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVY 1133 W EV RRLR RSL A+R V L Q V G Sbjct: 1128 QWCDAEVLRRLRRRSLAASRREVEAVPPRALGAFLPAWQAVT--------------AGRS 1173 Query: 1134 EGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGED 1193 GVD V R +EQL G +PAS WE +LPARV DYS MLDEL ATG V+W+G L D Sbjct: 1174 RGVDAVARAVEQLQGALIPASAWEQLVLPARVADYSPAMLDELCATGEVLWAGAGGLPGD 1233 Query: 1194 DGLVALHLQEY-----------AAESFTPAEA---------------------------- 1214 DG V L L + A ++ P+ + Sbjct: 1234 DGWVTLMLADAAPLLLPALAARAGDTGEPSPSSRAATVDLAALATGEAGERPADGSQHPP 1293 Query: 1215 ---------DQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWAL 1265 D A + L +A++ LAD A F + +S R+ S+D +AL +W L Sbjct: 1294 TDDGPDLMIDDAAATPLHRAVLDALADDQALFFRTLSDRVG-----SLDDTALAGVIWDL 1348 Query: 1266 VWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR------------PVYAQPVSPR 1313 VW G+IT+D APLRA S R R A + Sbjct: 1349 VWAGLITNDTLAPLRARLSGGSATTHRAPPRPRRSTMRFASGYGAGLTGTGRGAGRPATP 1408 Query: 1314 VSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTL 1373 P +AGRWSLL + T R ALAE +LDR+G+++R AV+AE PGGF ++ + Sbjct: 1409 RRGGPPMVAGRWSLLPPRDTDPTRRAHALAETLLDRHGLVTRGAVVAERAPGGFAAVYRV 1468 Query: 1374 CRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLAT---------------------- 1411 + ED+GR RG FVEGLG AQFA +DRLR +A Sbjct: 1469 LSAFEDAGRARRGYFVEGLGAAQFAMPGAVDRLRAVAATQRAADEEPDWVEQPGGITGAL 1528 Query: 1412 --------------QATQTRHYTPVALSANDPANVWGNLLPWPAH-----PATLVPTRRA 1452 A + V L+A DPAN +G LPWPA P R+A Sbjct: 1529 GAVAFPAPGGRAQPGARRETDRRAVVLAATDPANPYGAALPWPARSEDPDGPGHRPGRKA 1588 Query: 1453 GALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDL 1512 GALVV+ G L+LY+ +GGK +L W E L P V AL A+R + + + Sbjct: 1589 GALVVLVDGDLVLYVERGGKTLLSWPEPARALQPAV-DALALAVRDGWLGQLAVERADGR 1647 Query: 1513 PVRQTPMFTLLREAGFSSSPQG 1534 + + + L AGF +P+G Sbjct: 1648 AITGSALGDALVRAGFHPTPRG 1669 >UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTJ5_THISH Length = 1476 Score = 1414 bits (3660), Expect = 0.0, Method: Composition-based stats. Identities = 639/1552 (41%), Positives = 868/1552 (55%), Gaps = 109/1552 (7%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS T WF F +PT VQ + W A +HAL++APTGSGKTLAAFL +DRL +E Sbjct: 2 FSRPTHTWFSDNFTEPTPVQREGWARIAAGDHALLVAPTGSGKTLAAFLAGIDRLMQEAD 61 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + R+LY+SP+KAL DV+RNL+ PL GI R GE +LRV +RTGD Sbjct: 62 DA------KAGVRVLYVSPLKALVYDVERNLRAPLTGILRTAERLGEPARSLRVDMRTGD 115 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TP ER ++P IL+TTPESL+L+L S+ARE LR V TVI+DEVHA+A SKRGAHLA Sbjct: 116 TPQAERRAQLKDPAQILVTTPESLFLLLGSKARENLRTVHTVIVDEVHALAPSKRGAHLA 175 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERL + QRIGLSATV A FLGGDR V +V+ A + + VPVA+ Sbjct: 176 LSLERLAEITDAEPQRIGLSATVNPPELAARFLGGDREVAIVDTSAKPALDLHVEVPVAD 235 Query: 255 MDDVSSVASGT----------------GEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 M+ V S A+ T E + E IWP + ++ + HRST++F Sbjct: 236 MEAVQSPATTTPPGPKRGGSILGELYAREVARPTPERGIWPAMYPALVAAIRSHRSTLIF 295 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 NSRGLAE+LT RLNE+ + +HHGS Sbjct: 296 VNSRGLAERLTQRLNEVADE-------------------------------PLVLAHHGS 324 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH 418 VS E+RA E+ LK+G L+ +VATSSLELG+DMGAVDLVI V +P SVA GLQR+GRAGH Sbjct: 325 VSHERRAEIEEGLKAGRLKGIVATSSLELGVDMGAVDLVILVESPGSVARGLQRVGRAGH 384 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQ 478 QVG VS+GL +P+ R DL++ AV+ E M G LE ++ P NPLDVLAQQ VA Sbjct: 385 QVGAVSRGLIYPKFRGDLLECAVVSEAMLEGLLEPISVPRNPLDVLAQQLVAMVCDTPRT 444 Query: 479 VDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA 538 V E + VRR P+++L R + + LDMLSG YPS +F+ RP L W+R LT R GA Sbjct: 445 VSELEALVRRTHPYRELSRPLLEGVLDMLSGHYPSAEFADLRPWLAWDRAEDRLTPRRGA 504 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQ 598 + + GTIPDRG+Y+V L A R+GELDEEMV+E+R + I LGA++WR++ Sbjct: 505 PMAVRLNAGTIPDRGLYAVHL----GGADGPRLGELDEEMVFETRAGENILLGASTWRVE 560 Query: 599 QITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF---LHLLADGAFFSGTIPPW 655 +IT D+VIV+PAPG +LPFW G+ GRP ELG IG L L+ Sbjct: 561 EITGDRVIVSPAPGEPGKLPFWHGDSLGRPVELGRRIGALTGKLGALSQAEAARWLEAHT 620 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 N+ + EQ+ TG++P + +ER RDE+GDWR + SP+G R+H PW + Sbjct: 621 PLSAFAAGNLAAYVHEQKQHTGVLPTDTAITVERFRDELGDWRACILSPFGARIHAPWGM 680 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 A+ + A G + V+ +DDGIV R DTD + +PE++ +++ E + ++AL Sbjct: 681 ALQNLLSARSGFEVQVMYTDDGIVLRFADTDALPDADELI-PDPEEIEELITEQLATTAL 739 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 FA FRE AARAL++ P RTPLW QR++++QLL YP FP++LET R+ L DV Sbjct: 740 FAGLFRENAARALMLTRNRPEGRTPLWAQRMKSAQLLATVSRYPAFPIVLETYRQALSDV 799 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 +DL L+ L+ + +++ +V T + SPFA SL+F YVA ++Y+ DAPLAERRA L+ Sbjct: 800 FDLAGLKALLADIRARRVRVDEVETRSASPFARSLVFAYVAAYIYEQDAPLAERRAQALT 859 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVED 955 LD LL LLGQ + ELLD +V+ ++E EL RA+ + L DLLR LG +++ Sbjct: 860 LDRGLLSELLGQAELRELLDAEVLEELEAELAHETDETRARDADELHDLLRRLGDQHLDE 919 Query: 956 LAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEI 1015 LA+R +E+ A +LE L R I+G+ R +DA RDALGV P LP+ Sbjct: 920 LARRC---TEDPAPWLETLKHSGRAAAVRIAGEPRFIAAEDAGLYRDALGVAPPPGLPDA 976 Query: 1016 YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ---- 1071 +L V L L R+ R +Q A F L A V L+ L +G ++ + Sbjct: 977 FLVPVPDALEQLLRRFARTRGPFVTKQAAARFGLTEAQVIPVLRALLTEGRLVQGELRPG 1036 Query: 1072 --QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTS 1129 + W ++ RRL+ R+L + R PV A AR L E G+ T Sbjct: 1037 GREPEWCDVDILRRLKRRTLASLRHQAAPVEARALARFLPEWHGITRETGQ--------- 1087 Query: 1130 PGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK 1189 + G +M V+ QL G+ LP SL ILPARV ++ EMLD ATG V+W G Sbjct: 1088 --RHGGAARLMDVVAQLEGLPLPWSLLAEVILPARVSGFTLEMLDMAAATGQVVWVGTGA 1145 Query: 1190 LGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKI 1249 G DG VAL+ +E A P A L + ++ L GA F ++ ++ Sbjct: 1146 QGPRDGRVALYRRERAPLLLPP--AGDLPDGPLHRTLLEHLDRRGASFYLELETAVQRAH 1203 Query: 1250 GESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQP 1309 E+ + + + ALW LVW G IT+D +APLRAL R S RRG Sbjct: 1204 PEA-NAADFRAALWDLVWAGAITNDTFAPLRALARG-----PSKSTGRSTRRGGQAL--- 1254 Query: 1310 VSPRVSYNTPNLAGRWSLL---QVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGG 1366 GRWS + + ++DTE+ +A AE +L+RYGI+SR+A +AEN+PGG Sbjct: 1255 -----------AGGRWSRVSELRDPTVSDTEQAVARAEMLLERYGIVSREAALAENLPGG 1303 Query: 1367 FPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLA--TQATQTRHYTPVAL 1424 F ++ + R+ME+SGRI RG FVEGL GAQFA ++DR+R + L Sbjct: 1304 FGAVYGVLRAMEESGRIRRGYFVEGLSGAQFAWAGSVDRIRGIRLEDDPQAGGEPVAQCL 1363 Query: 1425 SANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELL 1484 +A DPAN +G LLPWP P R GA V++ G +LYL GGK ++ ++ L Sbjct: 1364 AAMDPANPFGTLLPWPEPAGDTRPRRVPGAWVILVDGLPVLYLGPGGKHLVTLDQEPHRL 1423 Query: 1485 APEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 AL R R + +V+ +PV ++P +L EAGF +G Sbjct: 1424 -RAACRALHQIPRTGRRRLMIIEQVDGVPVNESPHAGMLLEAGFVRDYRGFS 1474 >UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C317F9 Length = 1480 Score = 1407 bits (3642), Expect = 0.0, Method: Composition-based stats. Identities = 668/1548 (43%), Positives = 879/1548 (56%), Gaps = 104/1548 (6%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F+PA RDWF RAF PT Q Q W A EH L+ APTGSGKTLAAFL+ALDRL + Sbjct: 8 DSFTPAVRDWFTRAFDAPTEAQAQAWPAIATGEHTLISAPTGSGKTLAAFLWALDRLAAD 67 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 D + + +R++Y+SP+KAL D++RNL+ PLKGI E + V IRT Sbjct: 68 PLPD-----RERRTRLVYVSPLKALSYDIERNLRAPLKGI--------APEGGISVAIRT 114 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP +ER+++ R PPD+LITTPESLYLMLTSRARE L G E VI+DE+HAVAGSKRGAH Sbjct: 115 GDTPQRERAQMLRTPPDVLITTPESLYLMLTSRAREILTGAEWVIVDEIHAVAGSKRGAH 174 Query: 193 LALSLERLDALLHTS-----AQRIGLSATVRSASDVAAFLGGDRP-VTVVNPPAMRHPQI 246 +AL+LERLDAL+ QRIGLSAT +V F+ G R +V+ + + Sbjct: 175 MALTLERLDALVGEHEGRAGVQRIGLSATQNPLEEVGRFMVGPRRRCRIVDTGVRKPLDL 234 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGR---EGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 +I VPV +M + D AG SIWP I +L V HRSTIVF N+R Sbjct: 235 QIHVPVESMVEPEQGTDVDPLDPVAGGEATRRSIWPAIYPELLRLVQDHRSTIVFVNNRR 294 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 AE+L RLNEL + + IA R+HHGS+++E+ Sbjct: 295 SAERLALRLNELATPEGEPAVEIA-------------------------RAHHGSLAREE 329 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R + E+ LK+GE+ C+VATSSLELGIDMGAVDLV+QV +P SVA+GLQRIGRAGH VG Sbjct: 330 RMVVEERLKAGEIPCIVATSSLELGIDMGAVDLVLQVESPKSVAAGLQRIGRAGHNVGDT 389 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVDEW 482 SKG FP+ R DL++ AV+ + M G +E P NPLDVL+QQ VA AA + L VDE Sbjct: 390 SKGRIFPKFRADLLECAVVAQRMREGAIEPTVVPRNPLDVLSQQIVAMAAAEEELNVDEL 449 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + RV R + +L R+ + LDML GRYPS +F+ RP++VW+R G++ R GA+ LA Sbjct: 450 FVRVTRTHSYAELSRQQLENVLDMLDGRYPSSEFAELRPRIVWDRIAGVIRPRRGARQLA 509 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 VT+ GTIPDRG++ V LP+ RRVGELDEEMVYE+R LGA+SWRI++I R Sbjct: 510 VTNAGTIPDRGLFMVTLPD------GRRVGELDEEMVYEARPGQTFLLGASSWRIEEIGR 563 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 D+VIVTPAPG +PFW+G+ GRP ELGE IG F D + + Sbjct: 564 DRVIVTPAPGAPGAIPFWKGDSVGRPKELGEAIGAFARWAVDQP-AEALVASHDLDPRAA 622 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 N+ + EQ+ AT ++P R +V+ER RDEIGDWR+ + SPYG R+H W +A++ +I Sbjct: 623 RNLLDFLREQQAATRVIPSDRTIVVERFRDEIGDWRLCVLSPYGGRIHAAWGLALSAKIR 682 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 G +A + SDDGI+ +PD D P A L EP++L V + SSALF ARFRE Sbjct: 683 DQLGLEADAIWSDDGIIVHLPDADE-PPGAEFALIEPDELEDAVVAELASSALFGARFRE 741 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 A RALL+P PG RTPLWQQRL++ LLE+A+ Y +FP+ILET RECL+DV DLP L Sbjct: 742 NAGRALLIPRAYPGKRTPLWQQRLKSQTLLEVAKRYGEFPIILETYRECLRDVLDLPGLH 801 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 L+ +L E+ I +V T T SPFA+SLLF YVA +MY+ D P AERRA+ LSLD +LLR Sbjct: 802 ELLTQLQRRELSIVEVETATASPFASSLLFDYVATYMYEGDTPNAERRAAALSLDRDLLR 861 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTG 962 LLGQ + +L+D + QVE++LQ + RA + L D+LR +G +T + AQR Sbjct: 862 ELLGQEELRDLIDADALDQVEDDLQHRSERTRASTRDELHDVLRRVGDLTAAEAAQRVVP 921 Query: 963 SSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSY 1022 + A+ L+ L + +R I G++R DA RDALGV P LPE +L V Sbjct: 922 -GVDAAAALDALASERRAVLLRIGGEQRWVDAADAGMYRDALGVVPPGGLPEAFLADVPD 980 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ--------QDI 1074 L L RY + H T E+ F + L+ L G ++ + Sbjct: 981 ALVRLLRRYAQTHGPFTTEEPRLRFGVDPT---PALRALERDGELVQGELRPGGVSGTRE 1037 Query: 1075 WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYE 1134 W V RRLR SL R P A L QGV P Sbjct: 1038 WCETNVLRRLRRASLAVLRREIEPADQRALASFLPSWQGV------------DKHPPGGA 1085 Query: 1135 GVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD 1194 G+D + + L G+ L S WE+++LP RV YS+ +D+L A+G ++W G LG D Sbjct: 1086 GIDRLREQLVPLQGLALTPSTWETEVLPRRVGAYSATWMDQLCASGELVWVGAGALGRRD 1145 Query: 1195 GLVALHLQEYAAESFTPAEAD--QANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGES 1252 G VAL+ ++ A P A A+ + +A+ A LA G +F+ + S Sbjct: 1146 GRVALYFRDDAPLIGPPPGAGRAPAHDTPDHEAVRARLAQGSCFFSDLLVDL-------S 1198 Query: 1253 VDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSP 1312 + A+Q+ALW L W G +T+D +APLRA T R RA + S Sbjct: 1199 LAPEAMQDALWDLAWAGEVTNDAFAPLRA------PRLTLARAQRRAMQRSGRSTGRFSS 1252 Query: 1313 RVSYNTPNLAGRWSLLQV----EPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFP 1368 R + GRWSL P + + R ALAE +L+RYG+++R+ V+AE IPGGF Sbjct: 1253 RRGAGRAEVQGRWSLTAPLFDAAPADPSARRRALAELLLERYGLLTRELVLAEGIPGGFS 1312 Query: 1369 SMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSAND 1428 + + +E G RG FVEGLGGAQFA ++RLR P+ L+A D Sbjct: 1313 GIYSELSQLETLGIARRGYFVEGLGGAQFALPGAVERLRAQR----APEEAPPLVLAATD 1368 Query: 1429 PANVWGNLLPWP-AHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE 1487 PA +G LPWP T P R GA VV++G + +LYL +GGK + V + E+ Sbjct: 1369 PAQPFGAALPWPKREGETRRPARTPGANVVIAGSEPVLYLERGGKALQVLVDPEDPRVRP 1428 Query: 1488 VFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 F AL R R L +VN PV T LL + GFS P+ L Sbjct: 1429 AFDALADHTRAGRIRRIALEKVNGEPVMGTRWEELLADVGFSVGPRRL 1476 >UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3F9_JONDD Length = 1618 Score = 1403 bits (3633), Expect = 0.0, Method: Composition-based stats. Identities = 658/1638 (40%), Positives = 906/1638 (55%), Gaps = 146/1638 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T +WF AF +PTA Q W AR HA+V+APTGSGKTLAAFL+A+D++ Sbjct: 4 LFSTPTVEWFTGAFDEPTAAQWGAWDAIARDHHAVVVAPTGSGKTLAAFLWAIDKISART 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + + +LY+SP+KAL TDV+RNL+ PL+GI R G T ++VG+RTG Sbjct: 64 QAPSSPLN---RCSVLYVSPLKALATDVERNLRAPLRGIEQAIARTGGTPYTMQVGVRTG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DTP ER + +PPDILITTPESL+LMLTS+AR L G++TVIIDEVH+VAG+KRGAHL Sbjct: 121 DTPPSERRRFGTHPPDILITTPESLFLMLTSQARSGLSGIDTVIIDEVHSVAGTKRGAHL 180 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-------GGDRPVTVVNPPAMRHPQI 246 ++SLERLDA L A+RIGLSATV V+ +L G RPVTVV PP + I Sbjct: 181 SVSLERLDAFLERPARRIGLSATVEPVDAVSDWLAGGRSISDGGRPVTVVAPPVSKKFDI 240 Query: 247 RIVVPVANMDDVSSVAS-----GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 + VP+ +++D S+WP++E I+D V +H +T+VFTN+ Sbjct: 241 SVEVPLEDLNDPQQTGEFDVSLSGDAAQEPRARASVWPHVEERIVDLVQQHTTTLVFTNA 300 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R AE+LTAR+NE+ A R + + + A S D IAR+HHGS+S+ Sbjct: 301 RRGAERLTARMNEIAARR--SGQDVPDAGSMHAAAIQAQSGAALDVDHVIARAHHGSMSR 358 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 +R+ TE LK+G L CVVATSSLELGIDMG++DLV+QV P S ASGLQR+GRAGH VG Sbjct: 359 SERSRTESDLKNGVLPCVVATSSLELGIDMGSIDLVVQVGPPPSAASGLQRVGRAGHSVG 418 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 VS+G FP R +LV +A+I + M LE L NPLDVLAQQ VA A+D DE Sbjct: 419 AVSRGRIFPVHRGELVPAAIIAQRMRTRTLEPLHRVANPLDVLAQQIVAMLAVDDWDKDE 478 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 ++ +RR+AP+ L F A LDML+GRYPS DF R ++VW+R T +LT RPGA L Sbjct: 479 LFTTIRRSAPFMGLGHATFVAVLDMLAGRYPSEDFGELRARIVWDRATNLLTGRPGALRL 538 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKA-----------------------GSRRVGELDEEM 578 A TSGGTIPDRG+Y V L + + G +RVGELDEEM Sbjct: 539 AATSGGTIPDRGLYGVFLVDSAAVSDGVVDTSVDDAPGVPRAGKVRLVGGKRVGELDEEM 598 Query: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638 VYESRV D+ TLG+++WRI++IT D+V+V+PAPG RLPFW+G+G GR LG IG + Sbjct: 599 VYESRVGDVFTLGSSTWRIEEITPDRVLVSPAPGVPGRLPFWKGDGLGRSFSLGVAIGQW 658 Query: 639 LHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWR 698 L G +E +N++ + EQ ATG++P +V+ER RDE+GDWR Sbjct: 659 LR---RGRHDDDDAVWAGLDERAASNLRSYLREQEEATGVLPTDDTIVVERFRDELGDWR 715 Query: 699 IILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDA------ 752 +++H+P+G RVH PWA+ I R+ +G D + + SDDGIV R+P D A Sbjct: 716 VVIHTPFGARVHAPWALVIGARLRERYGFDTATMHSDDGIVIRLPAADDPYDVAGAVSDG 775 Query: 753 ----------AIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLW 802 + + + +VRE V S+LFAARFRE A RALL+P P R PLW Sbjct: 776 ASENAGGVGFDDLMVAGDAVESLVREHVADSSLFAARFREAAGRALLLPRARPDRRQPLW 835 Query: 803 QQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTT 862 QQR R++QLL +A +PDFP++LE +RECLQD YD+PAL +M R+ G +++ +VTT Sbjct: 836 QQRQRSAQLLSVAAQFPDFPIVLEAVRECLQDDYDVPALRSVMERVEEGTLRVVEVTTPR 895 Query: 863 PSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL---GQVDPGELLDPQVI 919 SPFA +LLFGY A+F+Y SDAPLAERRA+ L+LD LL LL G D +LLD V+ Sbjct: 896 ASPFAQTLLFGYTAQFIYDSDAPLAERRAAALTLDPTLLAELLGASGSGDLADLLDEGVV 955 Query: 920 RQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEE------------- 966 + EL + RR + E ++D L+ GP+TVE L R G + Sbjct: 956 EKTALELAGVG-DRRLRHAEDVWDFLQRWGPITVEGLGARWVGIDRDDLVQVDPHHLNRS 1014 Query: 967 --------------VASYLENLLAVKRIFPAMI----SGQERLACMDDAARLRDALGVRL 1008 + L+ +R+FP + +E +A + DA RLRDALGV + Sbjct: 1015 VDALSCPDPRGVDWARDVVAELVQSRRVFPVRLMTRSGPREYVASIVDAGRLRDALGVAI 1074 Query: 1009 PESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM 1068 P + + + V PL D+ RY + H T + +A F +G A+V + +++L G+V+ Sbjct: 1075 PPGIADEWSAPVRDPLGDMVRRYAKTHVPFTVDDVAERFGVGRAVVFDVVRRLVASGVVV 1134 Query: 1069 NLQ---------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATD 1119 + D + +V R LR RSL A R PV +T A L + + Sbjct: 1135 AGRLLPSTFGGVGDEYCDADVMRVLRRRSLAALRADVEPVVPSTLAVFLPQWHRL----- 1189 Query: 1120 GSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLAT 1179 G GVDG +EQL G +P S E+ ILPARV Y E LDEL+ Sbjct: 1190 -----------GELRGVDGTATALEQLVGAPIPVSTLEADILPARVVGYRPEFLDELMVG 1238 Query: 1180 GAVIWSGQKKL----GEDDGLVALHLQEYAAESFTPAEA----DQANRSALQQAIVAVLA 1231 G V+W G + L G DG+V+ H A + D ++ + + VL Sbjct: 1239 GEVMWVGHRSLSGLRGGRDGIVSFHDPLSAHLTLPAVPPLQNNDDFVVESIHRDVWEVLE 1298 Query: 1232 DGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT-RSSSNAR 1290 + G +FA Q++ ++ + L +ALW LVW G +T+D +APLRAL R + R Sbjct: 1299 NSGGFFAHQLAAQLG------CSFTVLGDALWDLVWAGYVTNDSFAPLRALLGRQRAAPR 1352 Query: 1291 TSTRRSHRARRGRPVYAQPV--SPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLD 1348 + + S R RR + Q + P L GRWS + + E + A +LD Sbjct: 1353 SRSTASRRPRRLGSRFGQLASVNSDRLSEHPTLVGRWSAVARPFVGREESLAAWTTVLLD 1412 Query: 1349 RYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR- 1407 RYG+I+R + +E+ F + +E +G + RG FVE LGG+QFA L +D LR Sbjct: 1413 RYGVITRSVLGSEDSGFRFTELYRALSHLETTGALRRGYFVEHLGGSQFAAPLAVDALRV 1472 Query: 1408 -DLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLY 1466 D A LS DPA +G+ L WP + PTRRAGA VV+ G+ + Y Sbjct: 1473 ADTARSGGGPLPGETRLLSVWDPAQPYGSTLAWPDSFSVARPTRRAGAHVVIHRGECVCY 1532 Query: 1467 LAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR------QTP-M 1519 + G+ + V+ V L A+ ++++N + V + P + Sbjct: 1533 VDHTGRSV-VFAPLPRPTLDRVCTVLREAVDDGRVSPMKVSKINGMEVLALVRSHEHPDI 1591 Query: 1520 FTLLREAGFSSSPQGLDW 1537 L +AG++ +P GL + Sbjct: 1592 VDALTQAGWTLTPSGLSY 1609 >UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacteria RepID=A8L6I9_FRASN Length = 1613 Score = 1397 bits (3617), Expect = 0.0, Method: Composition-based stats. Identities = 704/1442 (48%), Positives = 893/1442 (61%), Gaps = 69/1442 (4%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR+WF +F PT Q W A E ALV+APTGSGKTLAAFL++LD L R Sbjct: 20 FSAPTREWFASSFAAPTPAQAGAWAAVAGGESALVVAPTGSGKTLAAFLWSLDSLARSAP 79 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 A + R+LY+SP+KAL DV+RNL+ PL GI R G ++ VG+R+GD Sbjct: 80 P----ADPARRCRVLYVSPLKALAVDVERNLRAPLTGIRAAATRLGLPVPDVSVGVRSGD 135 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER R PPDILITTPESL+L+LTS RE LRGVETVI+DEVHAVAG+KRGAHLA Sbjct: 136 TPAAERRAFGRTPPDILITTPESLFLILTSATREALRGVETVIVDEVHAVAGTKRGAHLA 195 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERLD LL AQR+GLSATVR +VA FLGG RPVTVV PPA + I +VVPV + Sbjct: 196 LSLERLDDLLDVPAQRVGLSATVRPVDEVARFLGGPRPVTVVRPPAAKTLHIDVVVPVED 255 Query: 255 MDDVSSVASGTGEDSHAG--REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 M ++ VA E S AG SIWP +E +LD +L H STIVF NSR LAE+L ARL Sbjct: 256 MANLGEVAGAVPEGSAAGAAPRASIWPAVEEKVLDLILGHSSTIVFANSRRLAERLCARL 315 Query: 313 NELYAARLQRSPSIAVD-----------------------AAHFESTSGATSNRVQSSDV 349 NELYA RL + + + GA + V ++V Sbjct: 316 NELYADRLATADATGDPDGQETGGWESGGWESGERAGPAGSRAPAEIMGAAGSAVSPAEV 375 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASG 409 +AR+HHGSVS+EQR + E+ LK+G L VVATSSLELGIDMGAVDLV+Q+ +P SVA+G Sbjct: 376 EVARAHHGSVSREQRMLIEEDLKAGRLPAVVATSSLELGIDMGAVDLVVQIESPPSVAAG 435 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 +QRIGRAGHQVG S+G+ P+ R DL++ AV+ E M GR+E + P NPLDVLAQQ V Sbjct: 436 MQRIGRAGHQVGAASRGVVLPKHRSDLLECAVVAERMSDGRIEAVRYPRNPLDVLAQQIV 495 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 A A++ +VDE + VRRAAP+ LP ++A LDML+GRYPS DF+ RP++ W+R T Sbjct: 496 AMVAVEDREVDELGALVRRAAPFATLPASAYEAVLDMLAGRYPSDDFAELRPRITWDRAT 555 Query: 530 GILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIIT 589 G+L RPGAQ LAVTSGGTIPDRGM+ V L + RVGELDEEMVYESRV D++ Sbjct: 556 GVLAGRPGAQRLAVTSGGTIPDRGMFGVFLVGEKAS----RVGELDEEMVYESRVGDVVL 611 Query: 590 LGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS 649 LG++SWRI++IT D+V+VTPAPGR RLPFW G+ GRPAELG +G FL L+ + Sbjct: 612 LGSSSWRIEEITPDRVLVTPAPGRPGRLPFWHGDAPGRPAELGRALGAFLRELSAASPRD 671 Query: 650 --GTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGR 707 + + AN+ ++EQR A G + R +V+ER RDE+GDWR+ +HSP+G Sbjct: 672 AADRVRAAGLDTWATANLLTYLDEQRAAAGHLSDDRRIVVERFRDELGDWRLAVHSPFGA 731 Query: 708 RVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVR 767 V+ PWA+AI R+ +GA+ ++ +DDGIVAR+PD + P+A + +FEPE+ +VR Sbjct: 732 PVNAPWALAIGARLRERYGAEVQIMHTDDGIVARVPDA-AEPPEAELVVFEPEETEALVR 790 Query: 768 EAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILET 827 VG SALFA+RFRECA+R+LL+P RTPG RTPLWQQR R++ LL +A + DFPV+LET Sbjct: 791 AEVGGSALFASRFRECASRSLLLPRRTPGRRTPLWQQRQRSAHLLSVASTFGDFPVVLET 850 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 +RECLQDVYD+PAL LMR + +++ +V T +PSPFA+SLLFGYVA FMY DAPLA Sbjct: 851 MRECLQDVYDVPALVGLMRDIGARSLRVVEVETPSPSPFASSLLFGYVAAFMYDGDAPLA 910 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 ERRA VLSLDS LL LLG+ + EL+DP + ++ ELQRL P R A G E DLLR Sbjct: 911 ERRAQVLSLDSSLLAELLGEAELRELIDPGALERITAELQRLVPDRHAHGVESTADLLRA 970 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVR 1007 LG +T E+ R S+L L R+ I G+ R A ++DA RLRDALGV Sbjct: 971 LGDLTDEEAGARGV-----APSWLAALADAGRVIRVRIGGEARWAPVEDAGRLRDALGVP 1025 Query: 1008 LPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLV 1067 LP +P + V PL DL RY R H +A F LG+A+V L++L G + Sbjct: 1026 LPMGVPAAFTEPVRDPLGDLVSRYARTHGPFEPAAVAARFGLGVAVVVGALERLTAAGRL 1085 Query: 1068 MNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGS 1121 + + + W V R LR RSL A R+ V L Q V Sbjct: 1086 VRGELHPDRAGEQWCDAGVLRALRRRSLAALRKEVEAVPTRAMGAFLPAWQSVT------ 1139 Query: 1122 PALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGA 1181 G GVD V+R +EQL G +PAS E +LPARV DYSS MLDEL ATG Sbjct: 1140 --------TGRGHGVDAVLRAVEQLQGAPVPASALEQLVLPARVSDYSSAMLDELCATGE 1191 Query: 1182 VIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQI 1241 V+W+G L +DG V L L + A E P A L +AI+ LA A F + + Sbjct: 1192 VLWAGAGGLPGNDGWVTLVLADSAGELLPP-PDLDAAGGDLHRAILDALAGDQALFFRTL 1250 Query: 1242 SQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR- 1300 S R+ ++D +AL +ALW LVW G++T+D A LR + A + R R Sbjct: 1251 SDRVG-----ALDDTALADALWDLVWAGLVTNDTLAALRVQLGAGRPAHPAHPVPPRRRS 1305 Query: 1301 -RGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVI 1359 RGRP + P + GRWSLL + T R ALAE++LDR+GI++R AV Sbjct: 1306 ARGRPARFGRPTMPRRAGPPTVGGRWSLLPEREPDPTRRAHALAESLLDRHGIVTRGAVT 1365 Query: 1360 AENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHY 1419 AE PGGF ++ + + ED+GR RG FVE LG AQFA +DRLR +A Sbjct: 1366 AERTPGGFAAVYRVLSAFEDAGRCRRGYFVESLGAAQFAVPGAVDRLRAIAGAQRDAADQ 1425 Query: 1420 TP 1421 Sbjct: 1426 PA 1427 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 7/116 (6%) Query: 1427 NDPANVWGNLLPWPAHPA------TLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK 1480 +DPAN +G LPWP PA P R+AGALVV+ G+L+LY+ +GG+ +L W + Sbjct: 1496 SDPANPYGAALPWPKRPAADGEGSGHRPGRKAGALVVLVDGELVLYVERGGRTLLSWSDA 1555 Query: 1481 EELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 LL P V AL A+R R + + + V + + L AGF +P+GL Sbjct: 1556 PGLLGPAVG-ALAGAVRTGSLGRLAVEKADGAAVVGSGLGAALERAGFHPTPRGLR 1610 >UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MDW5_BRAFD Length = 1601 Score = 1394 bits (3609), Expect = 0.0, Method: Composition-based stats. Identities = 726/1603 (45%), Positives = 955/1603 (59%), Gaps = 88/1603 (5%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LP FSPAT WF +F PT Q W R + LV+APTGSGKTLAAFL A+DR Sbjct: 6 QALPSSFSPATARWFEESFDAPTPAQAAAWEAIDRGDDTLVVAPTGSGKTLAAFLTAIDR 65 Query: 69 LFREGGEDTREAHKRK--------------------TSRILYISPIKALGTDVQRNLQIP 108 L R + + ++ +LYISP+KALG DV+RNL P Sbjct: 66 LASGPAPADRPSGPGRAAAGPGRGGERGGGAGRGRRSTSVLYISPLKALGVDVERNLTSP 125 Query: 109 LKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE 168 L G A GE L VG+RTGDTPA ER +L +PPDILITTPESL+LMLTS+ARE Sbjct: 126 LVGTARTAESLGEVRRPLSVGVRTGDTPAAERRRLVTHPPDILITTPESLFLMLTSQARE 185 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG 228 TLRGVETVI+DEVHAVAG KRG HLALSL RLDALL AQRIGLSATV +VAAFL Sbjct: 186 TLRGVETVILDEVHAVAGGKRGVHLALSLARLDALLEAPAQRIGLSATVEPVEEVAAFLT 245 Query: 229 GD---RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI 285 G R VTVV P + + I + +PVA++ + A ++ G ++WP++E + Sbjct: 246 GSGRSREVTVVRPESTKRWDITVTLPVADLQSIEPPADAVDDEDVTG---TVWPHVERAV 302 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ 345 L+ VL HRSTIVFTNSR AE+LT +LN L+A R+ + +A ++S Sbjct: 303 LERVLAHRSTIVFTNSRSQAERLTGKLNRLHARRVAVDAAAGAPSADSARAGASSSGSAG 362 Query: 346 SSDV---------FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDL 396 + IAR+HHGS+SKE RA E+ LKSG LRCVVATSSLELGIDMGAVDL Sbjct: 363 AGGAGEEDGTEGEDIARAHHGSMSKEVRAGIEEQLKSGALRCVVATSSLELGIDMGAVDL 422 Query: 397 VIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTP 456 V+QVA P+SV+S LQR+GRAGH VG VS G P D++ SAV V+ AGR+E L Sbjct: 423 VLQVAAPMSVSSLLQRVGRAGHDVGAVSTGSLHPLHAADVLRSAVAVQEAVAGRIEPLAV 482 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 P N LDVLAQ TV+AAAMD LQVDEW+ VR A P++ LPR FD T+D+L+GRYPS DF Sbjct: 483 PRNALDVLAQHTVSAAAMDDLQVDEWFDLVRTAHPYRALPRSAFDQTIDLLAGRYPSTDF 542 Query: 517 SAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 S RP+LV + +TGILTARPGAQ LAVTSGGTIPDRG+Y V L G++ + RRVGELDE Sbjct: 543 SELRPRLVHDHDTGILTARPGAQRLAVTSGGTIPDRGLYPVHLVAGDDDSQPRRVGELDE 602 Query: 577 EMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIG 636 EMVYESR D+ITLG TSWRI++IT +V V+PA G S R+PFW G+G+GRPA LG I Sbjct: 603 EMVYESRRGDVITLGTTSWRIEEITASRVTVSPAFGLSGRIPFWHGDGDGRPASLGRAIA 662 Query: 637 DFLHLLA--DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEI 694 LA + + + + + EQ++ATG VPG + LV+ER DE+ Sbjct: 663 SAQSELASLPRPEAEDRLGTLGLDSDARTVLLDHLAEQQHATGTVPGPQQLVVERFLDEL 722 Query: 695 GDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAI 754 GDWR++LH G+R+ PWA+A+ R+ +G D +A+DDGIV RIP + + P A + Sbjct: 723 GDWRVVLHCALGQRITGPWALAVGARVQERYGLDGQAMAADDGIVLRIPHGE-QPPGADL 781 Query: 755 FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEI 814 F+F PE++ Q VR VGSSALFAARFRECAARALL+P R P R+PLWQQR R+S LLE+ Sbjct: 782 FVFTPEEIEQEVRRLVGSSALFAARFRECAARALLLPRRDPTQRSPLWQQRQRSSHLLEV 841 Query: 815 AQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGY 874 A+ +PDFP++LE RECLQDVYDLPAL LM ++ +++ +V T PSPFA SLLFGY Sbjct: 842 ARPHPDFPIMLEAARECLQDVYDLPALVELMEQIGRRRLEVREVETPAPSPFARSLLFGY 901 Query: 875 VAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRR 934 +A+F+Y DAPLAERR + L+LD LL LLG V ELLD +VI +VE++LQ L R Sbjct: 902 LAQFIYDGDAPLAERRTAALALDQSLLAELLGSVSLRELLDAEVIAEVEQQLQGLTAQRA 961 Query: 935 AKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACM 994 +G E + D LR LGP+T +DL++R T ++ + LE L +RI ++G+E +A + Sbjct: 962 LRGGEQIADALRRLGPLTADDLSRR-TAEGVDLEAELEQLTRARRIISVRLAGREHVAAV 1020 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 +DA LRDALG LP LP+ +L V + L R+ R A F L + Sbjct: 1021 EDAGLLRDALGTALPPGLPQAHLAPVDRAVPQLLARWARGRGPFPAADAVEAFGLAPGVA 1080 Query: 1055 EEQLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 L+QL + ++ + + WV EV RR+R SL A+R PV YAR L Sbjct: 1081 RGTLEQLTAERVLQQGEFTPGRDGEEWVEAEVLRRIRRASLAASRREIAPVPGPVYARFL 1140 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 + Q + + DG++ V++QL GV LP S WESQ+LPAR+ D Sbjct: 1141 GQWQHLAGRRADGRRDRP-----TWRDRDGLLSVVDQLTGVSLPLSAWESQVLPARLPDV 1195 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESF----TPAEADQANRSALQQ 1224 + +LD A+G ++W+G +LG +DG + LHL E A + Sbjct: 1196 TPALLDAAFASGELVWTGHGRLGAEDGWIRLHLAEALPLGLDASALEEAAASLTEGSTAA 1255 Query: 1225 AIVAVLAD-GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 ++A+L GA QI + D+ GE++ A+ EALW L + G+IT+D + LR+ + Sbjct: 1256 RLLALLRGTPGALRHGQILTALADE-GEALAPPAVHEALWDLAFSGLITNDSFEALRSYS 1314 Query: 1284 RSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYN---------TPNLAGRWSLLQVEPLN 1334 R +++R S R A+ + + P AGRWS ++VEP++ Sbjct: 1315 RGPASSRGSRAAGRSRPLTRRGAARLSAAMMRQGAASVSELAEGPVGAGRWSAVRVEPVD 1374 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 R ALA +LDR+G+++R A+ E+IPGGF ++ + +E++G RG FV+GLG Sbjct: 1375 PAARAAALATLLLDRHGVVTRGAMDVEDIPGGFAAVYRVLAMLEENGSCRRGYFVDGLGA 1434 Query: 1395 AQFAERLTIDRLRDLATQATQTRHY-----------TPVALSANDPANVWGNLLPWPA-- 1441 +QFA +DRLRD A T VAL+ DPAN +G LPWP Sbjct: 1435 SQFAPVEAVDRLRDRCHDAEAAPGPAESPGGGGADATTVALAVTDPANPYGAALPWPELT 1494 Query: 1442 ----HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 AT+ P RRAGALV++ G + + +G K +L W EE EV L A+ Sbjct: 1495 IPPPEGATVRPARRAGALVLLRDGHVRAVVDKGAKHLLWWA--EESARDEVAAQLVRAIA 1552 Query: 1498 REPRL-RFTLTEVNDLPVRQTPMFT---LLREAGFSSSPQGLD 1536 E RL + + +N + P+ L +AG SP+ L Sbjct: 1553 EESRLPQLRIERINGHGIDSAPVAEIARALVDAGCYRSPRSLR 1595 >UniRef50_D1C082 DEAD/H associated domain protein n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1C082_XYLCX Length = 1632 Score = 1394 bits (3608), Expect = 0.0, Method: Composition-based stats. Identities = 711/1649 (43%), Positives = 932/1649 (56%), Gaps = 147/1649 (8%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D PATRDWF AF+ PTA Q W + +HALV+APTGSGKTLAAFL+A+DRL E Sbjct: 6 DRLGPATRDWFAGAFEGPTAAQDGAWDAIGQCKHALVVAPTGSGKTLAAFLWAIDRLHHE 65 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + R+LY+SP+KAL DVQRNL+ PL GI R G + VG+RT Sbjct: 66 PVP-----ERARRCRVLYVSPLKALAADVQRNLRSPLTGIRQAAARAGIETPEIAVGMRT 120 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP ER PPD+L+TTPESL+L+LTS+AR L GVETVI+DE+HAVAG+KRGAH Sbjct: 121 GDTPPSERRSFATRPPDVLVTTPESLFLVLTSQARAGLLGVETVILDEIHAVAGTKRGAH 180 Query: 193 LALSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGG-------DRPVTVVNPPAM 241 LALSLERLDALL AQR+GLSATVR VA FLGG R V VV PPA Sbjct: 181 LALSLERLDALLVASGSRPAQRVGLSATVRPVEVVAQFLGGHRTADDGGREVVVVQPPAT 240 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAG--------------REGSIWPYIETGILD 287 + I +VVPV ++ D+ +V G D AG R S+WP++E ++D Sbjct: 241 KRWAIDVVVPVPDLADLDAVGQPGGSDDDAGPGAPDLTGDAASPLRRASVWPHVEERVVD 300 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSS 347 V HRST+VFTNSR AE+LT+R+NEL++ RL + + + + +S Sbjct: 301 LVAGHRSTLVFTNSRRGAERLTSRMNELWSQRLGEAVDDQGATWPAAAPGQSGTAVGRSP 360 Query: 348 DV-FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 D +AR+HHGS+S+ +R TE LK G L VVATSSLELGIDMGAVDLV+QV P SV Sbjct: 361 DAEVLARAHHGSMSRAERTRTESELKEGRLPAVVATSSLELGIDMGAVDLVVQVGAPPSV 420 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 ASGLQRIGRAGHQVG VS G+ FP R DLV +AV+ + M AG +E L P NPLDVLAQ Sbjct: 421 ASGLQRIGRAGHQVGAVSHGVVFPTHRGDLVPAAVVAQRMRAGEIEPLHVPANPLDVLAQ 480 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 Q VAA A D E + RRA P+ L ++A LDML+GRYPS DF+ R ++VW+ Sbjct: 481 QVVAALATDDWDAAELLATFRRAHPYAHLGDATWNAVLDMLAGRYPSEDFAELRARIVWD 540 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYESRV 584 R T L+ RPGA LA TSGGTIPDRG+Y V L EE + G +RVGELDEEMVYESRV Sbjct: 541 RATDRLSGRPGALRLAATSGGTIPDRGLYGVYLAGSEEGAQRGGKRVGELDEEMVYESRV 600 Query: 585 NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD 644 D TLG+++WRI+ IT D+V+V+PAPG RLPFW+G+ GRP ELG +G F+ + Sbjct: 601 GDTFTLGSSTWRIEDITPDRVLVSPAPGLPGRLPFWKGDAQGRPVELGRAMGAFVRTIDT 660 Query: 645 GAFF--------SGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGD 696 + + N+ + EQR ATG +P R +V+ER RDE+GD Sbjct: 661 ELAAGPDGADAGRARLREAGLDAWAADNLAAYLTEQRTATGRLPDDRTIVVERFRDELGD 720 Query: 697 WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPD------------ 744 WR+++HSP+G RVH PW++ +AGR+ A +G D +V+ SDDGIV R+PD Sbjct: 721 WRVVVHSPFGARVHAPWSLVLAGRLRARYGLDVAVMHSDDGIVLRLPDSGAGWDDLGAAP 780 Query: 745 -----------TDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 +D + A L +P+ ++ VR+ +GSS LFAARFRE +ARALL+P R Sbjct: 781 TWADGGPGGAGSDAPIVTAEDLLVDPDDVVGAVRDELGSSVLFAARFREASARALLLPRR 840 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEI 853 P R PLWQQR RA+QLL++A +PDFP+ LE RECLQD +D+ AL LM L G + Sbjct: 841 RPDRRQPLWQQRQRAAQLLQVAAQFPDFPMTLEAARECLQDDFDVAALAALMGDLGAGRV 900 Query: 854 QISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ---VDP 910 +I +V T TPSPFA SLLFGY A+F+Y DAPLAERRA+ LSLD +LL LLG Sbjct: 901 RIVEVATQTPSPFAQSLLFGYTAQFLYDGDAPLAERRAAALSLDPDLLAELLGDQGATAI 960 Query: 911 GELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE-EVAS 969 +LLDP + + E ELQ LAP R+AK EGL+D+LR GP + L R + +V Sbjct: 961 ADLLDPAAVERTESELQALAPDRQAKDAEGLWDVLRRTGPHPLAALEARTREEARGQVPD 1020 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFL 1029 +L L +R+ +G E+ A ++DA RLRDALGV LP +PE V L DL Sbjct: 1021 WLAELERARRLIRVRFAGAEQWAVVEDAGRLRDALGVALPVGVPETLTELVPDALGDLVR 1080 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ---------QDIWVSDEV 1080 R++R H V A +A + LG+A+V L +L+ G V+ D W EV Sbjct: 1081 RHVRTHGPVAAADVAARYGLGVAVVLHALARLQAAGTVVRGALRPSSLGGTGDEWCDPEV 1140 Query: 1081 FRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVM 1140 R LR RSL A R PV L Q V SP GVDGV+ Sbjct: 1141 LRTLRRRSLAALRAEVEPVEPQALGVFLPRWQQVG-------------SPAAPRGVDGVL 1187 Query: 1141 RVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGED---DGLV 1197 R +EQLAG +PAS E+ +LPARV YS +LDEL G V+W G +L DG+V Sbjct: 1188 RAVEQLAGAAVPASALETLVLPARVPGYSPALLDELTTAGEVLWCGHARLPGSGGGDGMV 1247 Query: 1198 ALHLQEYAAESFTPAEADQAN---RSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVD 1254 +LHL + AA + P + + + L +A++ +L G +F ++++ +V Sbjct: 1248 SLHLADGAALTLRPPDPVEPGGPLDTPLHRAVLDLLTGSGGFFLPRLAELAGTSASATV- 1306 Query: 1255 LSALQEALWALVWQGVITSDIWAPLR-ALTRSSSNARTSTRRSHRARRGRPVYAQPVSPR 1313 + LW LVW G +T+D PLR A+ + A + R RAR + Sbjct: 1307 -----DVLWDLVWAGRVTNDGLGPLREAVGTGAGGAHRAPRAPARARPVSRTRFGGLGRP 1361 Query: 1314 VSYNTP--------NLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPG 1365 S +P GRWS L + T R AL + +L+R+G+++R +E G Sbjct: 1362 ASSGSPVSAAAVVRTGGGRWSALPDVERDPTIRAHALTQVLLERHGVLTRAVAPSEGAAG 1421 Query: 1366 GFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL------------------- 1406 F + + R +E+ G + RG FVEGLGG+QFA +D+L Sbjct: 1422 AFRDVYRVLRELEERGAVRRGYFVEGLGGSQFALPGAVDQLRTDAADRSRAHESDDDVAR 1481 Query: 1407 ------RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPAT---LVPTRRAGALVV 1457 R TR + L+A DPAN +G L WP P R+AGA+VV Sbjct: 1482 PASAPGRGSTRPGGDTRPPEALLLAATDPANPYGAALAWPRTGGASSVHRPGRKAGAVVV 1541 Query: 1458 VSGGKLLLYLAQGGKKMLVWQEKEELLAPE---VFHALTTALRREPRLRFTLTEVNDLPV 1514 + G L+LY+ +GG+ +L + A L A R + V+ +P Sbjct: 1542 LVDGDLVLYVERGGRTVLSFAPPGPGGARRTGAAARELAAAASSGRLGRVLIQRVDGVPA 1601 Query: 1515 R-----QTPMFTLLREAGFSSSPQGLDWG 1538 +TP L +AGF+ +P+GL Sbjct: 1602 LTAARDRTPAAAALLDAGFAVTPRGLRVA 1630 >UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRE7_HALO1 Length = 1523 Score = 1393 bits (3607), Expect = 0.0, Method: Composition-based stats. Identities = 665/1572 (42%), Positives = 888/1572 (56%), Gaps = 105/1572 (6%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 F PAT WF AF PT VQ Q W A ++AL+IAPTGSGKTLAAFL+ +DRL Sbjct: 3 RFGPATEAWFSSAFAAPTKVQEQGWARIAAGDNALLIAPTGSGKTLAAFLWCIDRL---- 58 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 RE + R++Y+SP+KAL DV+RNL+ PL GIA R G V +RTG Sbjct: 59 SLPGREERRTPGVRVVYVSPLKALVYDVERNLRAPLAGIARAAEREGIDVRLPSVAVRTG 118 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT ++ER R+P +ILITTPESLYL+LTS+ARETLR ET+++DEVHA+A SKRGAHL Sbjct: 119 DTSSKERRTQLRHPAEILITTPESLYLLLTSQARETLRSCETIVVDEVHALAPSKRGAHL 178 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERL L QRIGLSAT ++VA +LGGDRPV++V+ A + IVVPVA Sbjct: 179 ALSLERLAHLAARDPQRIGLSATATPLAEVARYLGGDRPVSIVDTAAPPALDLEIVVPVA 238 Query: 254 NMDDVSSV--------------------------ASGTGEDSHAGREGSIWPYIETGILD 287 +M A G S E +WP I +L Sbjct: 239 DMTRPEDSLPAAAAGSGRGAFGVDSSLGPGRPLGAEAEGASSDNRPERGMWPAIYPRLLQ 298 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSS 347 + HR+TIVF NSRGL E+LT RLNEL + + A+ ++ + Sbjct: 299 LIDEHRTTIVFVNSRGLCERLTHRLNELAEDLAAERAAERARESGAAENGQASRSKGGQT 358 Query: 348 ---------DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI 398 I RSHHGS++ +R E+ALKSG +R +VATSSLELGIDMGAVDLV+ Sbjct: 359 SGSPAGQAPGTSIVRSHHGSLAHSERTQVEEALKSGAIRAIVATSSLELGIDMGAVDLVV 418 Query: 399 QVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPH 458 V +P SVASGLQRIGRAGH VG SKG FP+ R DL+++AV+ M AG +E+L P Sbjct: 419 LVESPSSVASGLQRIGRAGHGVGETSKGRLFPKHRGDLLEAAVVSSRMMAGAIESLRVPK 478 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSA 518 NPLDVLAQQ VA A++ QVD + VRRAA +++LP+ LDM+SGRYPS DF+ Sbjct: 479 NPLDVLAQQIVAMVAIEPWQVDALAAVVRRAAGFRELPQDALIGVLDMVSGRYPSHDFAD 538 Query: 519 FRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM 578 P++VW+R++ L+AR GA+ LA+ SGGTIPDRG Y V L E RVGELDEEM Sbjct: 539 LIPRVVWDRQSDELSARRGAKTLALLSGGTIPDRGTYGVYLGE-----DGPRVGELDEEM 593 Query: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638 V+E TLGAT+WR+++ITRD+V VTPAPG LPFWRG+G GRP ELG +G F Sbjct: 594 VHEITPGQTFTLGATTWRVERITRDRVQVTPAPGEVGMLPFWRGDGPGRPLELGRAMGAF 653 Query: 639 LHLLADGAFFSGTIP---PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIG 695 + LA + + N+ + QR ATG++P R +V+ER RDE+G Sbjct: 654 VRELAALPEEQAHARLVSEFRLDAWAADNLLAHLGGQREATGVLPTDRTIVVERFRDELG 713 Query: 696 DWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIF 755 D+R+ + SP+G RVH PWA+AI R+ G + + SDDGIV R+ T+ LPDA + Sbjct: 714 DFRVCILSPFGSRVHAPWALAIEARLSQRAGFEVQTLWSDDGIVLRM-QTEDGLPDAELL 772 Query: 756 LFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA 815 L EPE++ +V E +G SALFA +FRE AARALLMP R PG RTPLW QRL+A +LL +A Sbjct: 773 LPEPEEVEDLVIEQLGGSALFAGQFRENAARALLMPRRRPGQRTPLWVQRLKAQELLAVA 832 Query: 816 QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYV 875 + YP FP+++ET R CLQDV+DLPAL L+ + E+++ + T PSPF+ SL+F YV Sbjct: 833 RSYPAFPIVMETYRACLQDVFDLPALSELLGAIRRREVRVELIETDAPSPFSRSLVFAYV 892 Query: 876 AEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRA 935 A ++Y+ DAPLAERRA LSLD +LLR LLGQ D LLD VI ++E ELQ L RR Sbjct: 893 AAYLYEGDAPLAERRAQALSLDRQLLRELLGQEDLRALLDAAVIDELEAELQALDDSRRP 952 Query: 936 KGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMD 995 + + L DLLR LG + ++L R V L L +RI + G+ R M+ Sbjct: 953 RHVDALSDLLRRLGELDDDELRARWDAREMPVEDALAELQRARRIARLRVGGRARWVAME 1012 Query: 996 DAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVE 1055 D RDALG P +PE++L V+ P+ L R+ R ++ Q+A ++L A V+ Sbjct: 1013 DMGLYRDALGAAPPPGVPEVFLEPVAAPVETLLGRFARTRGPFSSAQVAARYALPPAQVD 1072 Query: 1056 EQLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLL 1109 L L QG ++ D W EV RR++ R+L R PV + R Sbjct: 1073 ALLGALAGQGKLLRGAFRPGATGDEWCEPEVLRRIKRRTLAKLRSEVAPVDSAILGRFAP 1132 Query: 1110 ERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 GV G + V+ QL G+ + ES ILPARV D++ Sbjct: 1133 AWHGVGEGG---------------RGSRRLGEVLAQLEGLPMSLHELESAILPARVSDFA 1177 Query: 1170 SEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAV 1229 MLDEL A G+++W G LG DG +AL+ ++ A + P + L + I+ Sbjct: 1178 PRMLDELGAMGSLVWVGHGALGTRDGKIALYRRDRVA-ALLPPPEEPEELGPLHRQILDH 1236 Query: 1230 LADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 L++ GA F + L EAL L W G++T+D + PLR L Sbjct: 1237 LSERGASFFVALLSACAPA-----STPELLEALGDLAWAGLVTNDTFQPLRLL------- 1284 Query: 1290 RTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE---PLNDTERMLALAENM 1346 V A R +T +GRWSL++ ++TE A + Sbjct: 1285 -------------GRVRAGGSKRRARESTSAASGRWSLVRELLAGAPSETECAHRRALTL 1331 Query: 1347 LDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL 1406 L+R+GI+SR+ E +PGGF ++ + R+ME+SG++ RG FVEGLGGAQFA +DRL Sbjct: 1332 LERHGIVSREVAAIEPLPGGFSAIYQVLRAMEESGKVRRGYFVEGLGGAQFAFPGAVDRL 1391 Query: 1407 RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHP--ATLVPTRRAGALVVVSGGKLL 1464 R L P+ L+A DPAN +G +LPWPAH P R AGA VV+ GG+L+ Sbjct: 1392 RGLRGDDGGD----PLVLAAADPANPYGWMLPWPAHGDEGAQGPRRVAGARVVLCGGELV 1447 Query: 1465 LYLAQGGKKMLVWQEK-EELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLL 1523 L+L +G +++L + + + AL + + ++ R P L Sbjct: 1448 LFLDKGCRRLLSFPAAGDRERLIQAGRALAVVAGKRRGKMLRVESIDGASARTAPQAETL 1507 Query: 1524 REAGFSSSPQGL 1535 + AGF + +GL Sbjct: 1508 QAAGFYADARGL 1519 >UniRef50_C4DG18 ATP dependent helicase, Lhr family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DG18_9ACTO Length = 1534 Score = 1386 bits (3589), Expect = 0.0, Method: Composition-based stats. Identities = 659/1598 (41%), Positives = 864/1598 (54%), Gaps = 146/1598 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR WF F PT Q W AR ++ALV+APTGSGKTL+AFL++LDRL Sbjct: 9 FSRPTRAWFAERFGAPTPAQAGAWEAIARGDNALVVAPTGSGKTLSAFLWSLDRLATTPK 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + ++ R+LY+SP+KAL DV+RNL+ PL GI +E +R G ++ V +RTGD Sbjct: 69 PE----DPKRRCRVLYVSPLKALAYDVERNLRQPLAGIGEEAKRLGVEAPDVSVSMRTGD 124 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA +R R P DILITTPESL+L+LTS AR+ LRG++TVIIDEVHAV G+KRGAHLA Sbjct: 125 TPADQRRAFARTPSDILITTPESLFLLLTSAARDALRGIDTVIIDEVHAVCGTKRGAHLA 184 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L LERLDALL AQRIGLSATVR + A ++GG RPVT+V PPA + ++ + V V + Sbjct: 185 LCLERLDALLPQPAQRIGLSATVRPIEETARYVGGPRPVTIVKPPAAKTIELSVDVTVPD 244 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + D++ V + SIWP I + D + +RSTIVF NSR LAE+L +RLNE Sbjct: 245 LADLTDVDE--------QGQPSIWPSIVKRLHDLIEANRSTIVFVNSRSLAERLCSRLNE 296 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + S S + + R+HHGS+S+E+R E LKSG Sbjct: 297 VVVKHDTPYRSQPAYIMAQSSAAAGVMPVLA-------RAHHGSMSREERLQVETGLKSG 349 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELR VV+TSSLELGIDMGAVDLV+ + +P SVASG+QR+GRAGHQVG VS+G+ P R Sbjct: 350 ELRAVVSTSSLELGIDMGAVDLVVLIGSPPSVASGVQRVGRAGHQVGAVSQGVVLPTHRS 409 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 DL+ + V E M G +E L PP NP+D+L+Q V+ AMD +VD+ VR AAP+ Sbjct: 410 DLLAATVAAERMLDGGIEELRPPSNPIDILSQHLVSMVAMDDWRVDDLARVVRGAAPFAS 469 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 L + LDM+SG+YPS FS +PKLVWNR TG LTARPGAQ LAV + GTIPDRG+ Sbjct: 470 LSDEALRSVLDMVSGKYPSTGFSGLKPKLVWNRATGRLTARPGAQRLAVLNAGTIPDRGL 529 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 Y V L EG RVGELDEEM+YESRV D+ LGATSWRI+ IT D+V+V+PAPG++ Sbjct: 530 YGVYLAEGG---TGSRVGELDEEMIYESRVGDVFLLGATSWRIESITPDRVLVSPAPGQA 586 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLL-------------------------------- 642 AR+PFW+GE GRPAE G IG L L Sbjct: 587 ARMPFWKGEDVGRPAEFGRAIGVRLRELTNESEANAGGKRHAADGEPGAANAGATATASD 646 Query: 643 -----------------ADGAFFSGTIPPWLAE--------ENTIANIQGLIEEQRNATG 677 ADG + ++ +N+ +++QR TG Sbjct: 647 GASADESEESPAGKRNAADGTSGGASSRRHGLPGSAGSVLADSAASNLAAYVDQQREHTG 706 Query: 678 IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG 737 VP R +V+ER RDE+GDWR+I+H G RV+ PWA+AIA R+ G DA + +DDG Sbjct: 707 AVPDDRTVVVERFRDELGDWRVIVHCLLGARVNRPWALAIAARLRERLGVDAHAMGTDDG 766 Query: 738 IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGH 797 IV RIPD P A + FEPE + +IV E + +S LF+ARFRECAARALL+P + G Sbjct: 767 IVLRIPD-MTDPPGAELLAFEPEAITRIVTEQLTASPLFSARFRECAARALLLPRKAIGR 825 Query: 798 RTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 R PLWQQR RA+QL E+A+ + DFP+ E RECL++ +D+ AL LMR L D Sbjct: 826 RQPLWQQRQRAAQLFEVAREFTDFPITAEAARECLEEYFDMDALTGLMRSLAERSTAAVD 885 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQ 917 V T + SPFA S+L +VA +Y D PLAERRA+ +S LL LLG+ D +LLDP Sbjct: 886 VVTESASPFALSILSSFVAGNLYGEDEPLAERRAAA--FNSGLLDELLGEGD--QLLDPA 941 Query: 918 VIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAV 977 V+ + E LQ GR G E + +LLR +G + DLA+R + Sbjct: 942 VVAEAEAWLQWRD-GRDLSGAEDVAELLRVVGDQSDGDLAERGIAVAAAEELEAAGRAVA 1000 Query: 978 KRIFPAMISGQERLACMDDAARLRDALGVRLPE---------SLPEIYLHRVSYPLRDLF 1028 ++ Q R ++DA R RD LGV LPE PL DL Sbjct: 1001 -----VTVAEQRRWIAVEDAVRYRDGLGVELPELPPELLSTNGTGATAGSPTPDPLDDLV 1055 Query: 1029 LRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-----QDIWVSDEVFRR 1083 RY R H + A F L +VE L +L G+V + W + +V R Sbjct: 1056 ARYARTHGPFETAECAERFGLPGPLVEAALHRLDADGVVRHGSYTQDGSRQWCAVDVLRL 1115 Query: 1084 LRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVI 1143 LR ++L A R PV Y L + QGV G G D V V+ Sbjct: 1116 LRRKTLAALRAEISPVPVAKYVSFLADWQGVG---------------GKAIGTDAVADVL 1160 Query: 1144 EQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQE 1203 +QL G +PAS WES +LP RV +YS LDEL +G ++WSG L DG + E Sbjct: 1161 DQLQGTAIPASAWESTVLPVRVGEYSPAQLDELTGSGELLWSGSGGLPGTDGWLTFAYAE 1220 Query: 1204 YAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALW 1263 A P ++A L + ++ L F + ++ + D + EALW Sbjct: 1221 TAPLLL-PLPDEEAIAGDLHRELLDALESPR--FFRDLTGVVEG------DDPEVLEALW 1271 Query: 1264 ALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAG 1323 LVW G +++D APLRA S +RR R P V P+ AG Sbjct: 1272 DLVWGGWVSNDSLAPLRAKLSGPSPKPQQSRRPRR-----PGRFTVTRQAVRSAPPSAAG 1326 Query: 1324 RWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRI 1383 RW L + T R A +LDR+G++ R A GF + +ME+ G Sbjct: 1327 RWYRLPDRDTDPTRRAHAATATLLDRHGVVVRGAAA--GHASGFAGQYPILSAMEERGAA 1384 Query: 1384 MRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPA-- 1441 RG FV GLG AQFAE +DRLR + L+A DPAN +G +PWPA Sbjct: 1385 RRGYFVSGLGAAQFAEPGAVDRLRS-------ATPKGALVLAACDPANPFGAGMPWPARS 1437 Query: 1442 -HPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREP 1500 + R+AGALVV+ G+L Y+ +GG+ +L + + R Sbjct: 1438 SEESGHRAGRKAGALVVIVDGELAWYVERGGRTILTYTADRQRTVAAAEAL-VATANRGG 1496 Query: 1501 RLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 R T+T V+ P+ TP+ L EAG ++P+GL +G Sbjct: 1497 LARVTVTHVDGTPIAGTPVGAALTEAGLRATPKGLKFG 1534 >UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7I8_ACIC5 Length = 1565 Score = 1379 bits (3570), Expect = 0.0, Method: Composition-based stats. Identities = 646/1601 (40%), Positives = 875/1601 (54%), Gaps = 153/1601 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P T +WF F PTA Q W AR E L+ APTG+GKTL AFL+ LDRL Sbjct: 23 LFHPVTAEWFRAVFDHPTAPQRMGWPAIARGESTLIFAPTGTGKTLTAFLWCLDRLMLHA 82 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 + RILYISP+K+L DV+RNLQ PL GIA RR + IRTG Sbjct: 83 PPM------EEGCRILYISPLKSLAVDVERNLQSPLAGIAATAARRNVPVHMPEIAIRTG 136 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT +ERS+ R+P +ILITTPESLYL+LTS A +LR VETVI+DE+HA+ +KRGAHL Sbjct: 137 DTAQRERSRFRRHPAEILITTPESLYLLLTSEAAASLRTVETVILDEIHALVPTKRGAHL 196 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD----------------------- 230 ALSLERL+A+ QRIGLSAT R +VA FL G Sbjct: 197 ALSLERLEAITQKPLQRIGLSATQRPLEEVAHFLAGAESQPSTAADETAPAHEWTTNDER 256 Query: 231 ----RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS-GTGEDSHAGREGSIWPYIETGI 285 RPVT+V + +R+ VPV +M + +G S + SIW I + Sbjct: 257 PHLFRPVTIVQANEPKQLNLRVEVPVEDMARLGQPEELPSGAASQGPKRTSIWSAIHPRL 316 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ 345 ++ + +ST++F NSR LAE+L A LNE+ Sbjct: 317 VEIIRERQSTLLFVNSRRLAERLAAALNEIAGE--------------------------- 349 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS 405 +AR+HHGS++ QRA E ALK+G LR +VATSSLELGIDMGA+DLVIQ+ P S Sbjct: 350 ----PLARAHHGSLAAAQRAEIEDALKAGRLRALVATSSLELGIDMGAIDLVIQIEAPPS 405 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLA 465 VASG+QRIGRAGH VG S G+ FP+ R DL+ A + M +E+ NPLDVLA Sbjct: 406 VASGMQRIGRAGHSVGLPSDGIIFPKYRADLIACAAVTRAMHERLVESTRYLRNPLDVLA 465 Query: 466 QQTVAAAAMDA----------------LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG 509 QQ VA A + V++ ++ +RRAAP+ L R F+ LD+L+G Sbjct: 466 QQIVATVAHPPAAARPRAKGQPPFEPHIAVEDIFTLLRRAAPFASLSRTAFEGVLDLLAG 525 Query: 510 RYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR 569 RYPS +FS RP++ W+R + ILT R GA+ LA+ +GGTIPDRG+Y V L + Sbjct: 526 RYPSDEFSELRPRITWDRVSNILTPREGAKSLAILNGGTIPDRGLYGVFLARSD---KPV 582 Query: 570 RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPA 629 RVGELDEEMV+ESR D LGA++WRI++I D+V+V+PAPG ++PFW G+ GRP Sbjct: 583 RVGELDEEMVFESRTGDTFLLGASTWRIEEILPDRVLVSPAPGEPGKMPFWHGDAAGRPL 642 Query: 630 ELGEMIGDFLHLLA---DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLV 686 E G IG + L A S + + N+ + +Q AT VP R+LV Sbjct: 643 EFGRRIGALIRELRALPRNAAISRLVREHDLDTLAAENLLRFLADQEIATVTVPDDRNLV 702 Query: 687 LERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTD 746 +ER RDE+GDWR+ + +P+G VH PWA+A+AGRI A G D + DDG V R PDTD Sbjct: 703 IERTRDELGDWRVCVLTPFGSSVHAPWAMAVAGRIRAAGGPDVETMWGDDGFVLRFPDTD 762 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 PDA + L EP + +V +GS+ALFAA+FRE AARALL+P R R PLWQQR Sbjct: 763 T-PPDADLLLLEPAEAADLVLRQLGSTALFAAKFRESAARALLLPRRRAQGRAPLWQQRK 821 Query: 807 RASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPF 866 RA LL +A YP FP++LE REC++DV+D+P+ +R + ++++ V T TPSPF Sbjct: 822 RAYDLLSVASKYPAFPMLLEAYRECMRDVFDMPSFLETLRAIQKRDVRVHVVDTRTPSPF 881 Query: 867 ATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEEL 926 A+SLLF YVA ++Y DAPLAERRA LS+D + LR LLG D ELLD I+QVEE+L Sbjct: 882 ASSLLFSYVANYIYDGDAPLAERRAQALSIDQDQLRELLGDSDLRELLDADAIQQVEEQL 941 Query: 927 QRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMIS 986 Q L G RA+ +G+ DLL LG ++ E+LA+R + ++ + L+ LL +RI I+ Sbjct: 942 QCLEEGHRARSADGIHDLLLRLGDLSREELARRLA--TPDLLAVLDRLLKARRILEVKIA 999 Query: 987 GQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHE 1046 + RL ++DAAR RDALG+ LP + + L V P+ +L R+ R H T + A Sbjct: 1000 SERRLIAVEDAARYRDALGIPLPPGIAKALLATVEKPVLELIRRFARTHGPFTLAEAAQR 1059 Query: 1047 FSLGIAIVEEQLQQLREQGLVMNLQQ------DIWVSDEVFRRLRLRSLQAAREATRPVA 1100 F L VE L+ L +G V+ W EV R +R ++L R+ PV Sbjct: 1060 FGLDARAVESVLRTLALEGRVLEGGFRPGGLHREWCDAEVLRLIRRKALSRLRKEIEPVE 1119 Query: 1101 ATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQI 1160 ARL QG+L G+D ++ IE L G +PASL ES I Sbjct: 1120 QQMLARLETHWQGIL---------------QRRRGLDALLDTIESLQGAPIPASLLESSI 1164 Query: 1161 LPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRS 1220 LPAR+ Y+ LD L+A G V W G LGE DG +AL+L + + S Sbjct: 1165 LPARLARYAPADLDTLIAAGEVTWCGLDSLGEHDGRIALYLADRMPQLLPTRAVTIDAAS 1224 Query: 1221 ALQQA---IVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWA 1277 I+ LA GGA F Q+ + + +ALW LVW+G++T+D Sbjct: 1225 PTAAREQLILDQLASGGAIFFAQLHEAVGGGF-----PGETLDALWNLVWRGLVTNDALH 1279 Query: 1278 PLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP----L 1333 LRA SS +R++ R+ P P GRWSL+ + Sbjct: 1280 ALRAYVTKSSTSRSAKRQH----------NVPSFRSRRTVPPTAQGRWSLVPMAERTTSA 1329 Query: 1334 NDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLG 1393 TE A+A +L RYG+++R++V EN+PGGF ++ + +++E+SGRI RG FV GLG Sbjct: 1330 QQTEWSHAIAHQLLHRYGVLTRESVAQENLPGGFSAIYDVLKALEESGRIRRGYFVAGLG 1389 Query: 1394 GAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP-----AHPATLVP 1448 AQFA +D LR L + V+++A DPAN++G++L WP + P Sbjct: 1390 AAQFALPAAVDLLRSLRNAP-EPESAEIVSIAATDPANLYGSVLRWPQPAPEEQGSDSSP 1448 Query: 1449 ---TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR-------- 1497 TR GA V++ G+L+ YL + + V+ +E V L L Sbjct: 1449 RTLTRTLGASVILRNGELIAYLRRSNPNVQVFLPAQEPDRTHVARDLAQFLASQVQQQLR 1508 Query: 1498 ---REPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 ++ +N +PV+Q P+ L +AGFS +P G Sbjct: 1509 DEEARRHGGLLISTINGVPVQQHPLARFLSDAGFSPAPLGF 1549 >UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q023K9_SOLUE Length = 1521 Score = 1372 bits (3551), Expect = 0.0, Method: Composition-based stats. Identities = 642/1577 (40%), Positives = 880/1577 (55%), Gaps = 124/1577 (7%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 S + D+F TR WF F PT Q W AR + L++APTG+GKTLAAF + +DR Sbjct: 13 SPVLDLFHAPTRAWFEAVFTAPTRPQALGWPAIARGDSTLILAPTGTGKTLAAFQWCIDR 72 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L K + R++YISPIKAL DV+RNL+ PL GIA R G + Sbjct: 73 LM-----FAPVPAKNQRCRVVYISPIKALAVDVERNLRAPLAGIAMAARAAGIAFHEPTI 127 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK 188 IRTGDTPA ER++ R P DILITTPES+YL+LTS ARE LR VETV++DE+HA+ +K Sbjct: 128 AIRTGDTPAAERARFARRPADILITTPESIYLLLTSNAREMLRSVETVVLDEIHALVPTK 187 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD------------------ 230 RG+HLALSLERL+AL QRIGLSAT R +VA FLGG Sbjct: 188 RGSHLALSLERLEALCGRKLQRIGLSATQRPLDEVARFLGGAVTASAGKKERAGDATQEI 247 Query: 231 -------------RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277 R VT+V+ A + +R+ VP+ +M + + +G S SI Sbjct: 248 LAEFESASATPKYREVTIVDASAPKRIDLRVEVPIDDMTRLDELVVPSGPASAPPVRPSI 307 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS 337 W I +L+ V H ST++FTNSR LAE+++ +NEL L Sbjct: 308 WSAIHPKLLELVRAHTSTLIFTNSRRLAERISGAVNELAGETL----------------- 350 Query: 338 GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 R+HHGSV+ +QR E LK G LR +VATSSLELGIDMGA+DLV Sbjct: 351 --------------VRAHHGSVAADQRKEIEDRLKMGTLRGLVATSSLELGIDMGAIDLV 396 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 +Q+ P SVASG+QR+GRA H+VGGVS + FP+ R DL+ A I M+ G++E++ P Sbjct: 397 VQIEAPPSVASGMQRVGRASHRVGGVSAAVMFPKYRGDLLGCAAITRAMYQGKVESVHYP 456 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 NPLDVLAQQ VA AMDA E Y+ VRRAAP+ L R VFD+ LDMLSGRYPS +F+ Sbjct: 457 RNPLDVLAQQIVAMVAMDAWDAGELYALVRRAAPYAALTRPVFDSVLDMLSGRYPSDEFA 516 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 RP+L W+R +G LT+R GAQ +AV +GGTIPDRG++ V L RVGELDEE Sbjct: 517 ELRPRLTWDRVSGQLTSRQGAQKVAVVNGGTIPDRGLFGVFLMGAT---KGARVGELDEE 573 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 MV+ESR D I LGAT+WRI++IT D+V V+PAPG ++PFW G+ GRPAE G IG+ Sbjct: 574 MVFESRTGDTIILGATTWRIEEITHDRVTVSPAPGEPGKMPFWHGDAAGRPAEFGREIGE 633 Query: 638 FLHLLADGAFFSGTIP---PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEI 694 L D + + + N+ +EEQ+ ATG VP R +V+ERCRDE+ Sbjct: 634 MTRELLDMPRAAAFARLIDEHSLDASAAENLMRYLEEQKIATGRVPSDRDIVIERCRDEL 693 Query: 695 GDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAI 754 GDWR+ + +P+G RVH PW +A ++ + G +A + +DDG V R+P+++ + Sbjct: 694 GDWRVCVLTPFGTRVHAPWCMAATAKLRSERGIEAESMWTDDGFVLRMPESEE-PLETEW 752 Query: 755 FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEI 814 L P +L +V +GS++LFAA+FRE AARALL+P R G R PLWQQR RA+ LL + Sbjct: 753 LLPSPGELKDLVLRQLGSTSLFAAKFREAAARALLLPRRRAGIRAPLWQQRKRAADLLAV 812 Query: 815 AQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGY 874 A Y FP++LET REC+++V+DL A +++ + G I+++ V +T PSPFA +LLF Y Sbjct: 813 ATRYSSFPMLLETYRECVREVFDLEAATAILKEVQRGTIRVTAVESTKPSPFAGTLLFSY 872 Query: 875 VAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRR 934 +A ++Y DAPLAERRA LS+D L +LG D ELLD + +VE++LQ L P + Sbjct: 873 IANYIYDGDAPLAERRAQALSIDQSQLEEILGSTDFRELLDRAAMEEVEQQLQALDPDYQ 932 Query: 935 AKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACM 994 A+ + L DLL +LG ++ E++A R TG S LE+L+A +R I+G+ R + Sbjct: 933 ARHTDALHDLLLKLGDLSKEEIAARSTGGS------LEDLVAARRAVRVRIAGETRYIPV 986 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 + AAR RDA+G LP L +++L +PL +L RY R H T ++A + L A V Sbjct: 987 EYAARYRDAVGTPLPPGLADVFLESSEHPLLELLRRYARTHGPFTTAEVAARYGLVAAQV 1046 Query: 1055 EEQLQQLREQGLVMNLQQ------DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 + L++ G ++ + W +V +++R ++L R P T+AR+L Sbjct: 1047 DASLRRQHLDGKLLEGEFRPEGVHREWCDPDVLQQIRRKTLARLRREVVPAEQHTFARML 1106 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 QG G D ++ IE L G LP S E +ILPARV DY Sbjct: 1107 TRWQGAAVPR---------------RGQDALLDTIEILQGAALPVSELEREILPARVSDY 1151 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVA 1228 LD L+A+G V+W G++ +G+ DG VAL+L E + + S IV Sbjct: 1152 RPADLDALMASGDVVWVGREPVGDRDGRVALYLAEALHK--LLLPSPPPELSGRALVIVE 1209 Query: 1229 VLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 +L GA F + Q + QEALW LVW G+IT+D + PLR L + + Sbjct: 1210 LLRQMGANFFAALHQAAGGGF-----PNDTQEALWELVWAGIITNDTFHPLRNLLHAKDD 1264 Query: 1289 ARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE---PLNDTERMLALAEN 1345 R R G P + + R GRWSL+ + TE A+ Sbjct: 1265 ERGR-REVREGPPGSPEFLRRFRARTG-GAQGGEGRWSLVAQRLGAGVTQTEWSANQAQQ 1322 Query: 1346 MLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDR 1405 +L R+GI+ R+ ENI GG+P++ ++ME++G + RG FV GLG AQFA +D Sbjct: 1323 LLVRHGIVMRETASVENIVGGYPAIYPALKTMEENGWVRRGMFVAGLGAAQFAMTAAVDM 1382 Query: 1406 LRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLL 1465 LR L + + L+A+DPAN +GNLL WP A R +GA VV+ G+L Sbjct: 1383 LRSLRAEP---EKPEALHLAASDPANPYGNLLAWP--GANHSMARASGASVVLVNGQLAA 1437 Query: 1466 YLAQGGKKMLVWQEKEELLAPEVFHALTTAL------RREPRLRFTLTEVNDLPVRQTPM 1519 +L + + V +EE V L L R+ R + E+ND P ++ + Sbjct: 1438 FLRRRNPSIRVMLPEEEPERSRVARELAKKLAEVAIRRQGRRSGLLIGEINDAPAQEHFL 1497 Query: 1520 FTLLREAGFSSSPQGLD 1536 L AGF SS G Sbjct: 1498 ARFLEGAGFVSSAPGFQ 1514 >UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKU2_9GAMM Length = 1506 Score = 1366 bits (3537), Expect = 0.0, Method: Composition-based stats. Identities = 641/1566 (40%), Positives = 851/1566 (54%), Gaps = 118/1566 (7%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF AF Q T +Q + W H L+IAPTGSGKTLAAFL A+DRL Sbjct: 6 FRPATDTWFGEAFGQATTIQSRGWPAIRAGRHCLLIAPTGSGKTLAAFLSAIDRL----- 60 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R +LYISP+KAL TD++RNL+ PL GI R GE V IRTGD Sbjct: 61 TGEPAPEPRTGYSVLYISPLKALATDIERNLRAPLTGITHTAARLGEPAREPVVHIRTGD 120 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TP ER R P DIL+TTPESLYL+L S+A E L V TVIIDEVHA+AG+KRGAHLA Sbjct: 121 TPQAERRAQAREPGDILVTTPESLYLLLGSKAAENLESVHTVIIDEVHALAGNKRGAHLA 180 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LSLERL QRIGLSATV FLGGDR V V++ + I+ P Sbjct: 181 LSLERLAERCDQDPQRIGLSATVHPVEVARGFLGGDREVDVIDAAEPPRLDLEILAPEEP 240 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIE-------------------TGILDEVLRHRST 295 + + + T E + GSI + ++ +L HRST Sbjct: 241 PAEHAPATTETPEPASPIPSGSILGAVYGQGTGKLPAAGGDRAARLEPRLMAAILEHRST 300 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 IVF NSRGL E+L R+NE + + + +H Sbjct: 301 IVFVNSRGLCERLVQRINEAWREQQPED---------------------AEPVEDLVAAH 339 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGSVS E+RA E LK+G LR +VATSSLELGIDMGAVDLVI V +P +VA GLQR GR Sbjct: 340 HGSVSHERRAEIEGRLKTGRLRGIVATSSLELGIDMGAVDLVIMVESPGAVARGLQRAGR 399 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 AGH VG VS+ L PR R DL++ AVI E M AG LE + PHNPLDVLAQQ VA Sbjct: 400 AGHGVGQVSRSLLLPRFRGDLLECAVIGERMQAGALEPIHAPHNPLDVLAQQLVAMVCER 459 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 VDE ++ +RRAAPW++L R + +ATLDMLSG YPS DF+ RP L W+R LT R Sbjct: 460 PRTVDELHALIRRAAPWRELSRALLEATLDMLSGHYPSTDFADLRPWLAWDRARDALTPR 519 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 GA L A + GTIPDRG+Y V G R+GELDEEMV+E + + +TLGA++W Sbjct: 520 RGAALAARLNAGTIPDRGLYGVH-----VGEGGPRIGELDEEMVFELKTGENVTLGASTW 574 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF---LHLLADGAFFSGTI 652 ++ ITRD+V+V+PAPG +LPFW G+G GRP +LG+ IG L + + Sbjct: 575 HVEAITRDRVLVSPAPGEVGKLPFWHGDGPGRPIQLGQAIGAATERLAHMDRAERTAWLR 634 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 E + + I+EQR ATG +P R +V+ER RDE+GDWR+ + +P+G RVH P Sbjct: 635 EHAPLSEAAVETLCDYIDEQREATGQLPSDRRIVVERFRDEVGDWRVCILTPFGARVHAP 694 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 WA+A+ G + + G + V+ +DDGIV R+ D++ LP+ +PE+L + V +G Sbjct: 695 WALALQGALTSTSGFEVQVMYTDDGIVLRLADSE-DLPELDSLFPDPEELEEAVTRELGH 753 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 S LFA+ FRE AARALL+ PG RTPLW QRL++ QLL + Y FPV+LET R+ L Sbjct: 754 STLFASAFRENAARALLLVRNRPGQRTPLWAQRLKSQQLLASVREYASFPVVLETYRQVL 813 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 DV+DL AL ++R + I++ +V T SPFA SL+F YVA ++Y+ DAP+AER+A Sbjct: 814 ADVFDLDALREILRGVQERRIRVHEVETPQASPFARSLVFAYVAAYIYEQDAPMAERKAQ 873 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 L+LD +L LLGQ + EL+DP+ + ++E EL R + L DLLR G +T Sbjct: 874 ALTLDRGMLAELLGQAELRELIDPEALAELEAELAHATEATRVPDADALHDLLRRRGDLT 933 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 +++A +E +LE L R I+G+ R +DAA RDALGV P L Sbjct: 934 PDEVAA---ACAEAPGPWLEQLARSLRAVEVRIAGEPRWIAAEDAALYRDALGVVPPPGL 990 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ- 1071 P +L +PL L RY R H +E L + L + L+ L G+++ + Sbjct: 991 PAAFLEPPQHPLEQLLRRYARTHGPFRSEDLGARYGLAPGALLPALESLERAGVLLRGEI 1050 Query: 1072 -----QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFA 1126 + W ++ RRL+ R+L R+ V A RLL QG+ Sbjct: 1051 RPQGTGEDWCELDILRRLKRRTLARLRDEAAAVDARALGRLLPAWQGLTEPG-------- 1102 Query: 1127 STSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSG 1186 G + + QL G+ LP S W + +LP RVRD+S + LD + A+G +W G Sbjct: 1103 -------RGASALRDTLTQLEGIALPWSAWIAHVLPMRVRDFSLDALDRITASGEFVWVG 1155 Query: 1187 QKKLGEDDGLVALHLQEYAAESFTP---AEADQANRSALQQAIVAVLADGGAWFAQQISQ 1243 LG+ DG + +E A P A A+ L QAI+ L GA F ++ + Sbjct: 1156 AGALGQRDGRIRFLRREQAMVLLEPEADAADTPASDDPLAQAILETLDRRGACFYMELER 1215 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 R ++ + ++ A+W VW G IT+D +APLR+L + ++AR R Sbjct: 1216 AARSAQPDARQDA-IEAAIWDRVWAGQITNDTFAPLRSLGQRKTSARGRRRPGQGL---- 1270 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWSLLQ---VEPLNDTERMLALAENMLDRYGIISRQAVIA 1360 GRWS + ++ TER AEN+L RYG++SR+ A Sbjct: 1271 -----------------AGGRWSRVADLIDPDVSLTERAREQAENLLARYGVVSREMARA 1313 Query: 1361 ENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYT 1420 E +PGGF + + R+MED+G++ RG FVEGL GAQFA +DRLR L A T Sbjct: 1314 EGLPGGFGRVYPVYRAMEDAGKLRRGHFVEGLTGAQFARAGAVDRLRALERAADDTPEPQ 1373 Query: 1421 PVALSANDPANVWGNLLPWPAHPATL--VPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 L++ DPAN WG LLPWP P R AGALV ++GG+ LLYLA G+++ VW+ Sbjct: 1374 --WLASVDPANPWGQLLPWPQPPEAAEGRLRRVAGALVALAGGQPLLYLAASGRQLFVWE 1431 Query: 1479 EKEELLAPEVFHALTTALRRE--------PRLRFTLTEVNDLPVRQTPMFTLLREAGFSS 1530 + E AL T R+ R T+ VN P RQ+P LR G Sbjct: 1432 AIPGIDTAEEHAALVTEAIRQLAGSRWLPKRRSITIETVNGEPARQSPFAAALRAGGAMG 1491 Query: 1531 SPQGLD 1536 +GL Sbjct: 1492 EVRGLR 1497 >UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJH4_EGGLE Length = 1741 Score = 1361 bits (3523), Expect = 0.0, Method: Composition-based stats. Identities = 772/1712 (45%), Positives = 986/1712 (57%), Gaps = 190/1712 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A P P +L FS R WFL AF +PT +Q + W V E+ALVIAPTGSGKTLAA Sbjct: 37 AREPTPHALT--RFSDEVRGWFLDAFPEPTPLQERAWDVIEGGENALVIAPTGSGKTLAA 94 Query: 62 FLYALDRLFREGGEDT---REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 FL+A+D L RE ++ K R+LYISP+KALG DV+RNLQ PL GIA Sbjct: 95 FLFAIDELMREKAATAGLPKKERPGKGVRVLYISPLKALGADVERNLQAPLAGIAARMAA 154 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVII 178 G +R G+RTGDT +R L RNPPDILITTPESLYLMLTS+ARETLR VETVI+ Sbjct: 155 AGGAMPEVRTGMRTGDTTPDQRRSLQRNPPDILITTPESLYLMLTSQARETLRTVETVIV 214 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 DEVHA+AGSKRGAHLALSLERLD LL AQRIGLSATVR ++A FLGG PV VV Sbjct: 215 DEVHALAGSKRGAHLALSLERLDDLLEKPAQRIGLSATVRPRDEIARFLGGPHPVRVVAS 274 Query: 239 PAMRHPQIRIVVPVANMDDVS--------------------------------------- 259 +R+ VPV +M V Sbjct: 275 EGRPDMDVRVRVPVRDMTAVPTFGGSDLTGGGAGKRGGGPRLAPAEEAWKSDRALRAAMA 334 Query: 260 --SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 S+ + T SIWPYIE ILDEVL HR+TIVF NSRGL EKLTARLN+LYA Sbjct: 335 KSSLPASTTSPDSRLGSSSIWPYIEASILDEVLAHRTTIVFVNSRGLCEKLTARLNDLYA 394 Query: 318 ARLQRSPSIAVDAAHFESTSG-ATSNRVQSSDVFIAR-SHHGSVSKEQRAITEQALKSGE 375 R+ + + +DAA S ++ + + + +HHGSVSKE+R E+ LK+GE Sbjct: 395 KRMGIARGVDMDAAAAPIRSDLGSTADMSTGAPAVIAKAHHGSVSKEKRLQVERELKAGE 454 Query: 376 LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD 435 L CVVATSSLELGIDMG++DLV+QVA P SVAS LQRIGRA HQVGG S G FPRTR + Sbjct: 455 LPCVVATSSLELGIDMGSIDLVLQVAAPPSVASALQRIGRANHQVGGRSTGSIFPRTRTE 514 Query: 436 LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL 495 ++D+AV E M+ GR+E N LDVLAQQTVAA AMD L D+W+ VRRAAP+ +L Sbjct: 515 IIDAAVAAEGMYEGRIEQTAFVKNALDVLAQQTVAAVAMDELAADDWFDTVRRAAPYSEL 574 Query: 496 PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMY 555 PRR FD+ L ML+GRY + D + F P++VW+RE G L ARPG Q AV S GTIPDRGM+ Sbjct: 575 PRRAFDSVLGMLAGRYATADLAEFSPRIVWDRERGRLLARPGTQRQAVMSAGTIPDRGMF 634 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 SV+LPEG+ G RRVGELDEEMVYESRV DIITLG +SWRI +ITRD+VIV PAPGRSA Sbjct: 635 SVVLPEGDGAQGRRRVGELDEEMVYESRVGDIITLGTSSWRISEITRDRVIVEPAPGRSA 694 Query: 616 RLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS----------------GTIPPWLAEE 659 RLPFW GEG GRPAE G M G FL +A G + ++ Sbjct: 695 RLPFWHGEGVGRPAETGRMRGAFLRAVAAGIEGDDAEAEEGGFGVSCAVSERLAADGLDD 754 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + N+ LI QR ATGI+P + LV+ERC DE GDWR++LHSPYGRRVHEPWA+A++ Sbjct: 755 DAQRNLVELIRSQRAATGIIPDDKTLVVERCEDEQGDWRVLLHSPYGRRVHEPWAMAVSD 814 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 RI A++G DA +A+DDGIV RIP T+ +LP +F F+P++L +I R+ VGS++LF+AR Sbjct: 815 RIMAIYGYDAQAMAADDGIVLRIPMTETRLPGIELFAFDPDELDRIARDRVGSTSLFSAR 874 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRECAARALLM PG R PLWQQRL+A QLLE A+ +FP+++ET RECLQDVYD+ Sbjct: 875 FRECAARALLMSPIAPGKRAPLWQQRLKAGQLLEAARREREFPILVETARECLQDVYDMR 934 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 AL LM ++ G +++ + T+ PSPFA LLFGYV E +Y D P AE+RAS+LSLD Sbjct: 935 ALHELMEQVQAGSVRLVEAQTSVPSPFAAPLLFGYVGEHLYAGDLPHAEQRASLLSLDPT 994 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 LL LLG D G++LD VI VE LQRLAP RR +G EG DLLR LGP++VE+ A R Sbjct: 995 LLGELLGSTDLGDVLDADVIAGVEAGLQRLAPDRRMRGIEGAADLLRVLGPLSVEEAALR 1054 Query: 960 HTGSSEEVASYLENL------------------LAVKRIFPAMISGQERLACMDDAARLR 1001 +E + R F ++ G+E A +DDAA LR Sbjct: 1055 MRSDAEADDDGAADEGGGEAATEEEAHALLEELQRAHRAFTVVLGGKELWAAVDDAAFLR 1114 Query: 1002 DALGVRLPESL-------------------PEIYL-----------------HRVSYPLR 1025 DALG +P PE +PL Sbjct: 1115 DALGATIPPWADALNRPASQSGQAQAPLRDPERSAQREIEGSRAASAESDGGEDALHPLD 1174 Query: 1026 DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDI--------WVS 1077 +L RY R H +AE A F +G+A+ + L +L G +M + WV Sbjct: 1175 ELLARYARTHGPFSAEAAAARFGIGVAVARDGLARLTSAGRLMQGRFGEDGDGRACAWVE 1234 Query: 1078 DEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVD 1137 VFRRLR SL AR A + V+ + +AR L++ QG P + +EG+D Sbjct: 1235 TGVFRRLRSLSLAEARRAVQAVSPSAFARFLIDLQGAGPLGEE-----------RFEGID 1283 Query: 1138 GVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD--- 1194 G+ +VI Q GV LPAS WE+ + P+RVRDY MLDELLA+G V+W+G ++ G++ Sbjct: 1284 GLAQVIAQFEGVFLPASAWEAHVFPSRVRDYRPGMLDELLASGDVVWAGARREGDEGDGR 1343 Query: 1195 ---------------GLVALHLQEYAAESFTPAEADQANRSA---------LQQAIVAVL 1230 GLVA + + P AD + ++ +V L Sbjct: 1344 ERALRPGSSREREAAGLVAFYPTDSPFAPVRPDLADAPSDGPKLEGSAAPSVEATVVEAL 1403 Query: 1231 ADGGAWFAQQISQRIRDKI-GESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 GG F +QI +R ++ E VD + + + L+W G T+D +AP+RA + A Sbjct: 1404 GFGGGLFFRQIVDAVRRRLAPEFVDEAVVASTMRELMWDGRATNDTYAPVRASLEGAGAA 1463 Query: 1290 RTSTRRSHRARRGRPVYA---------QPVSPRVSYNTPNLAGRWSLLQVEPLNDTERML 1340 R + R R A + ++ + L GRWSL+ P NDT R + Sbjct: 1464 AGKPRSAPRRRVSSRRSAMRTVDSPTMRGIASAQAAVGAALTGRWSLIMPSPENDTVRAI 1523 Query: 1341 ALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAER 1400 AL E++LDRYG++SR V +PGG ++ + R MED G ++RG FV+GLG AQFA R Sbjct: 1524 ALVESILDRYGVLSRDVVQLSGVPGGLGALLPVLRQMEDVGDVLRGAFVQGLGPAQFAAR 1583 Query: 1401 LTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWP---------AHPATLVPTRR 1451 TID LR + PV L+A+DPA ++G LPWP A PTRR Sbjct: 1584 ETIDVLRTYEAGDGEADPREPVVLAADDPACLYGAGLPWPPVARADAEGAEEHEARPTRR 1643 Query: 1452 AGALVVVSGGKLLLYLAQGGKKMLVWQEKEE-------LLAPEVFHALTTALRREPRLRF 1504 AG+LVVV GG LY A G + +L + + + L +L A R + Sbjct: 1644 AGSLVVVLGGVPALYAAAGLRSLLSFTDDGDALARAARALVAHEKRSLRRAGAEGARKKV 1703 Query: 1505 TLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 + +N + +P+ +L++AG P G+ Sbjct: 1704 VVETLNGRSILDSPLAEVLQDAGLVRLPDGMR 1735 >UniRef50_D2QB27 ATP-dependent helicase lhr n=3 Tax=Bifidobacterium RepID=D2QB27_9BIFI Length = 1583 Score = 1357 bits (3513), Expect = 0.0, Method: Composition-based stats. Identities = 691/1646 (41%), Positives = 904/1646 (54%), Gaps = 193/1646 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++FS T+ WF AFK PT Q Q W + LV APTGSGKTL AFL A+D L E Sbjct: 6 NLFSEPTKAWFEHAFKCPTDTQRQAWPAIRSGGNVLVTAPTGSGKTLCAFLSAIDGLMGE 65 Query: 73 ------GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 G ++ R+LYISP+KALG DV +NL+ PL GIAD+ + G + Sbjct: 66 SAAGTVGDGGNTSGKPKRGVRVLYISPLKALGVDVAKNLETPLCGIADQCKASGLPAPKV 125 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 RV IR+GDT +ER + +PPDIL+TTPESL+LMLTS+AR L VETVI+DEVHAVAG Sbjct: 126 RVCIRSGDTAPKERRAIVNHPPDILVTTPESLFLMLTSKARRILSTVETVIVDEVHAVAG 185 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 SKRGAHLALSLERLD L+ QRIGLSATV + A FLGG + V ++N + Sbjct: 186 SKRGAHLALSLERLDGLVGHPVQRIGLSATVNPPEEAARFLGGAQAVRIINSGTRPAMDL 245 Query: 247 RIVVPV-------------------------ANMDDVSSVASGTGEDSHAGRE------- 274 ++V P+ + V+ E R+ Sbjct: 246 KVVEPLEYVHGPKSSEARCRAGGVDSPNPRTPRISGVTPAMESLAERKGIIRKATTGSPA 305 Query: 275 ------GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAV 328 GS+WP IE +LDE+L+HR+T+VF NSRGLAEKLTARLN+++A + P Sbjct: 306 SPGLVGGSVWPAIERSVLDEILKHRTTLVFVNSRGLAEKLTARLNDMHAGMCRSEPHDVG 365 Query: 329 DAAHFESTSGATSNRVQSS---------DVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 E +G + + S+ IA +HHGSVSK++R E+ LK G+LRCV Sbjct: 366 SPEGREGFAGHYDSVIGSTTMLVGSHADGDAIAMAHHGSVSKDRRKQIEERLKRGQLRCV 425 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDS 439 VATSSLELGIDMG+VDLVIQ+A PLS++SGLQR+GRA HQVGGVS LF+P TR ++ + Sbjct: 426 VATSSLELGIDMGSVDLVIQIAPPLSISSGLQRVGRADHQVGGVSHALFYPITREQIIGT 485 Query: 440 AVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRV 499 A +E M AG +E LT P NPLDVLAQQTVAAAAMD L DEWY RVR+AA + DL R + Sbjct: 486 AACIESMRAGDIEPLTIPINPLDVLAQQTVAAAAMDDLDPDEWYGRVRKAASFTDLDRSI 545 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 FDA + M++G Y S DFS FRP L N E+G+++ARPGAQ LAVTSGGTIPDRGMY+V+L Sbjct: 546 FDAVMGMMTGAYDSEDFSVFRPPLQCNEESGLISARPGAQRLAVTSGGTIPDRGMYTVVL 605 Query: 560 PEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPF 619 PE + G RRVGELDEEMVYESR D+ITLG ++W+IQ+ITRD+V+V PAPGR+ARLPF Sbjct: 606 PETDCGPGPRRVGELDEEMVYESREGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLPF 665 Query: 620 WRGEGNGRPAELGEMIGDFLHLLADGAFFS------------------------GTIPPW 655 W GEG+GR G G FL ++ G + Sbjct: 666 WHGEGDGRDYGFGLAQGRFLREISQGLRARTAENFRHANVDGVDVESRFDARIIARLRRD 725 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 ++N I N+ L+EEQR TGI+P R LV+ERCRDE GDWRII+HSPYGRRVHEPWA+ Sbjct: 726 GLDDNAIGNLADLLEEQRAITGIIPNDRELVIERCRDEEGDWRIIIHSPYGRRVHEPWAM 785 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 AI RI +G D V A+DDGI+ R+PD DG LP + LF+ + L +I+ VG S L Sbjct: 786 AITTRIRQRYGFDGQVYAADDGIIIRLPDVDGALPIRELVLFDLDDLHRIIEAQVGESVL 845 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 ++ARFRECAAR+L +P PG R PLWQQRLRA+QLL A+ +FP++LET RECLQDV Sbjct: 846 YSARFRECAARSLFLPRTDPGRRVPLWQQRLRAAQLLNAARARQNFPLLLETARECLQDV 905 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 YDLPAL R+M LN I +SDVTT TPSPFA S+LFG+V MYQ D P AER +LS Sbjct: 906 YDLPALRRIMTGLNSATIALSDVTTETPSPFAESMLFGFVGAVMYQYDVPQAERSTRLLS 965 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEEL--QRLAPGRRAKGEEG-LFDLLRELGPMT 952 +D E+L LLG D +LD VIRQV EL + G + + GP Sbjct: 966 MDPEVLERLLGGTDMSTVLDADVIRQVAHELAEKTFWNDLDKGDVTGRVTRYAKTHGPFV 1025 Query: 953 VEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESL 1012 + + + + L+ L A + + +L Sbjct: 1026 ADRMIADLDIDAVQAVRALDMLHAKGDLLTGHFA----------------DAEALADAAL 1069 Query: 1013 PEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQ 1072 + V P+ Sbjct: 1070 TDSDSADVRSPIAHSSSPRAGTIGETD----------------------------YGTSS 1101 Query: 1073 DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGV 1132 W+ +VFRR+R RSL AR A +PV+ TY LL+RQGV P Sbjct: 1102 QQWLHRDVFRRIRSRSLAKARNAIKPVSPQTYQAFLLDRQGVGPVGGE-----------R 1150 Query: 1133 YEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK--- 1189 YEG+DG+MRVIEQL GV L A +WES + RVR Y MLDEL+A+G VIW G+ Sbjct: 1151 YEGIDGLMRVIEQLEGVSLAAQIWESSVFSTRVRGYHPSMLDELIASGDVIWVGEGAGDT 1210 Query: 1190 LGEDDGLVALHLQEYAA--ESFTPAEADQANRSALQQAIVAVLADGGAWFAQQIS----- 1242 ++ G +A + + E+ A+ + QAI+ L DGGA+ A Q+S Sbjct: 1211 AAKEVGNIAFYPADSPLVSETVASDTAEDDEALTVPQAIITALQDGGAFHASQLSATAKS 1270 Query: 1243 -------QRIRDKIGESVDLS----ALQEALWALVWQGVITSDIWAPLRALTRSSSNART 1291 ++ + GE + + +EALW+LVWQG +T+ +AP+RAL + S AR Sbjct: 1271 VWERHAEAQVDETTGEIIVPAWGESQFEEALWSLVWQGRVTNSSFAPVRALMQGSGIARA 1330 Query: 1292 STRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND----------TERMLA 1341 R R L G WS + + ER +A Sbjct: 1331 PKATLRRRVRMHT-----------AVPMTLGGLWSAVVAPRPIENGTATSNGGMEEREIA 1379 Query: 1342 LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERL 1401 E++LDRYG+I+ + + I GGF + + + ME+ G ++RG FV+G G AQFA Sbjct: 1380 RIESLLDRYGVIAAPLIDKDRIAGGFSRLYPVLKRMEEHGMLVRGLFVDGFGAAQFAGHD 1439 Query: 1402 TIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHP----------ATLVPTRR 1451 T+D LR Q + VAL DPA++ G + WP P RR Sbjct: 1440 TVDALRS----ENQWHSQSCVALEVTDPASLTGAAIAWPELEPTKTEKADGSRGAKPARR 1495 Query: 1452 AGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVND 1511 G++VV G+ +L+ +++ + + E L + L AL+R+ + E+N Sbjct: 1496 TGSIVVFKQGEPVLFAVPKSHRIMAFTDAEGTL-RQACSELVYALQRQSGGSISFNEMNG 1554 Query: 1512 LPVRQTP-MFTLLREAGFSSSPQGLD 1536 + ++Q LL AGF+ SPQG+ Sbjct: 1555 ISLKQRNKYMRLLHAAGFTESPQGMK 1580 >UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococcales RepID=A7HB32_ANADF Length = 1553 Score = 1344 bits (3478), Expect = 0.0, Method: Composition-based stats. Identities = 656/1604 (40%), Positives = 886/1604 (55%), Gaps = 149/1604 (9%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 + ++F PA R+WF R+F+ PT Q W R E L++APTGSGKTLAAFL +DR Sbjct: 7 AAALELFQPAVREWFSRSFEAPTPAQALAWPAIHRGESTLLLAPTGSGKTLAAFLSCIDR 66 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L E +++ R++Y+SP+KAL DV+RNL+ PL GIA RG+ V Sbjct: 67 LM-----FAPEPARKERLRVVYVSPLKALAVDVERNLRAPLAGIAQVASGRGDVHRIPAV 121 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK 188 +R+GDTPA ER++ R+P D+LITTPESLYL+LTS ARE LR VETVI+DE+HA+ +K Sbjct: 122 SVRSGDTPAPERARFARDPADVLITTPESLYLVLTSNAREVLRSVETVIVDEIHALVPTK 181 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG------------------- 229 RGAHLALSLERL+AL QRIGLSAT R +VA FLGG Sbjct: 182 RGAHLALSLERLEALAGRRLQRIGLSATQRPLEEVARFLGGAEPGLPGGAPPARGRGRRR 241 Query: 230 ------------------------------DRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 RPVT+V+ A + ++R+ VPV +M + Sbjct: 242 AQGGAALDAGPGASPGASAIAEFRTGADLRHRPVTIVDAGARKALELRVEVPVEDMSRIG 301 Query: 260 SVAS-GTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 +G+ S A SIW I +L+ V HR+T+VF NSR +AE+L A LNEL Sbjct: 302 EALELASGDASQAPVRASIWTAIHPRLLELVRAHRTTLVFVNSRRIAERLAAALNELAGE 361 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 L ++HHGS+++ QR E ALK G LR Sbjct: 362 LL-------------------------------VQAHHGSIARPQRVAIEDALKGGRLRG 390 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 +VATSSLELGIDMGAVDLV+Q+ P SVASG+QRIGRAGH++G S+G+ FP+ R DL+ Sbjct: 391 LVATSSLELGIDMGAVDLVVQIEAPPSVASGMQRIGRAGHRIGEASRGVVFPKYRADLLA 450 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 A + E M AG +E P NPLDVLAQQ VA ++D V+ Y VR AAP+ +L R Sbjct: 451 CAGLTEAMHAGEVEATRYPRNPLDVLAQQIVAMVSLDDWDVEALYEAVRGAAPFAELSRS 510 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 V+D LDMLSGRYPS +F+ RP++ W+R G L AR GA+ +AV +GGTIPDRG+Y V Sbjct: 511 VYDGVLDMLSGRYPSDEFAELRPRVTWDRVRGKLRAREGARRVAVVNGGTIPDRGLYGVY 570 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 L G K G RVGELDEEMV+ESRV + LGA++WRI++IT D+V+V+PAPG ++P Sbjct: 571 LAGG--KQGHTRVGELDEEMVFESRVGETFLLGASTWRIEEITHDRVLVSPAPGEPGKMP 628 Query: 619 FWRGEGNGRPAELGEMIGDF---LHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNA 675 FW G+ GRP ELG IG L A + + N+ +E+Q A Sbjct: 629 FWHGDAAGRPLELGRRIGRLVRALREAPREAARERLVRAHDLDARAAENLLRFLEDQAQA 688 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 TG VP R +++ERCRDE+GDWR+ L +P G V PWA+A R GAD + ++ Sbjct: 689 TGAVPDDRTILVERCRDELGDWRVCLLAPLGTPVLVPWAMAATVRARERLGADVETLWTN 748 Query: 736 DGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTP 795 DG R+P ++ PD + L +PE++ ++V +G++ALFAA+FRE A RALL+P R P Sbjct: 749 DGFAMRLPGSEA-PPDVSFLLPDPEEVEELVIGQLGATALFAAKFREAAGRALLLPRRRP 807 Query: 796 GHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQI 855 G RTPLWQQR R++ LL +A + FP++LE RECL+DV+DLPALE +++ L +++ Sbjct: 808 GQRTPLWQQRKRSADLLAVASRFGSFPILLEAYRECLRDVFDLPALEEVLQDLRARRVRL 867 Query: 856 SDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLD 915 T PSPFA SLLFG+VA F+Y DAPLAERRA LS+D LR LLG+ + ELLD Sbjct: 868 VTADTRVPSPFAASLLFGFVASFIYDGDAPLAERRAQALSIDQAQLRELLGEAELRELLD 927 Query: 916 PQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLL 975 + +E +LQ LAP R + +G+ DLL LG ++ E+LA+R ++ E+A+ E L+ Sbjct: 928 ADALVALEAQLQHLAPATRVRSVDGIADLLLRLGDLSREELARR--TATPELAAGAERLV 985 Query: 976 AVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAH 1035 A +R I G+ERL ++DAAR RD LGV LP LPE L V L L RY R H Sbjct: 986 AERRAVALRIGGEERLVAVEDAARYRDGLGVPLPPGLPEALLGPVPDALEGLAARYARRH 1045 Query: 1036 ALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN------LQQDIWVSDEVFRRLRLRSL 1089 A T +LA + E L+ L E+G ++ + W EV R LR RSL Sbjct: 1046 APFTTGELAARLGISRGAAERALRALLERGRLLEGAFRPHGAEREWCDPEVLRGLRRRSL 1105 Query: 1090 QAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGV 1149 RE PV +AR+LL G+ P G+D V+ +E+L G Sbjct: 1106 ARLREEIEPVEPRAFARMLLGWHGI---------------PRRGRGLDAVLDAVEKLQGA 1150 Query: 1150 GLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESF 1209 LPASL E+++LPARV Y +D L A G V+W G + LGE DG +AL+L + + Sbjct: 1151 PLPASLLETELLPARVDGYLRGDIDALAAAGEVLWIGLEPLGERDGRIALYLADALPKLL 1210 Query: 1210 TP-AEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQ 1268 P A + ++ LA GA F ++ Q +ALW LVW+ Sbjct: 1211 PPVRAAPEQPFGERAGRVLDHLARRGASFFAELHQAAGGGF-----EQQTVDALWDLVWR 1265 Query: 1269 GVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL 1328 G++T+D + LRA ++ R R RA P GRW+L+ Sbjct: 1266 GLVTNDTFQALRAYAEPATARRERGRALARAPS--------AFRSRRAAPPAAGGRWTLV 1317 Query: 1329 QVEP------LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGR 1382 TE A A+ +L RYG+++R A AE IPGGF ++ + R +E+SGR Sbjct: 1318 AARRELAGAVPTATEWSAATAQQLLVRYGLVTRGAAAAEAIPGGFSAVYDVLRHLEESGR 1377 Query: 1383 IMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAH 1442 I RG FV G+G QFA+ +D LR L V L+A DPAN +G LL WPA Sbjct: 1378 IRRGYFVAGVGAMQFAQPGVLDLLRALREPP---EAPEIVTLAATDPANPYGALLEWPAV 1434 Query: 1443 ---PATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPE-------VFHAL 1492 P P R GA VV+ G+L ++++G +++ W + E L Sbjct: 1435 QGGPEGKRPARAVGASVVLVDGELAAHVSRGARQLFAWLPEFEPERSHVGAAIAAAVVEL 1494 Query: 1493 TTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 L + + ++ P P+ L+ AGF + GL Sbjct: 1495 VRVLHGRDQAALVVE-IDGRPAAAHPLAGYLQAAGFVPTAAGLQ 1537 >UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NJ98_KYTSD Length = 1660 Score = 1332 bits (3448), Expect = 0.0, Method: Composition-based stats. Identities = 709/1688 (42%), Positives = 934/1688 (55%), Gaps = 191/1688 (11%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 S + FSP TR WF F PTA Q W +R E+ +V+APTGSGKTL+AFL++LD Sbjct: 2 SDDVLQRFSPPTRAWFEANFAAPTAAQAGAWDAISRGENTVVVAPTGSGKTLSAFLWSLD 61 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 R G + EA ++Y+SP+KAL DV+RNL PL GI R G + Sbjct: 62 RFVPHGDQQRPEAP----CSVIYVSPLKALAVDVERNLSAPLSGIGHAATRLGGEAPQVS 117 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGS 187 V +R+GDTPA ER + D+LITTPESLYL+LTSRARE L GV TVI+DEVHA+AG+ Sbjct: 118 VSLRSGDTPAAERRRFASGGADVLITTPESLYLLLTSRAREQLTGVTTVIVDEVHALAGT 177 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRGAHLALSLERLDA+L AQRIGLSATVR +V +L G RPVT+V PPA + ++ Sbjct: 178 KRGAHLALSLERLDAMLERPAQRIGLSATVRPVDEVGRWLTGGRPVTIVQPPAEKAWELS 237 Query: 248 IVVPVANMDDVSSVASGTGED--------------------------------------- 268 + V +M D+S+ + Sbjct: 238 VHADVPDMADLSTAPQVSPAQPDAGSVPGGAGAAASAGDSAPGAPGVPGTSDVESELSLP 297 Query: 269 --------------SHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + SIWP++E I++E+ RH ST+VF NSR AE+LTARLNE Sbjct: 298 EHLTLADLSPEVAGADPRDRASIWPHVEHRIVEEIARHTSTLVFCNSRRSAERLTARLNE 357 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNR------------------------VQSSDVF 350 ++A R+ + + A AA + +G + Sbjct: 358 IWAERVALADTDAGSAAEADEGAGGGDTDRGSAGRVTASSPRSPAEMMAQAGASAGAPAV 417 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGL 410 +AR+HHGSVSKE RA E ALK+G L VVATSSLELGIDMGAVDLV+QV +P SVASGL Sbjct: 418 LARAHHGSVSKEHRAEIEDALKAGTLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGL 477 Query: 411 QRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 QR+GRAGHQVG VS+G F R+DL+++AV+VE M +G +E L P NPLDVLAQQ VA Sbjct: 478 QRVGRAGHQVGAVSRGSFHALHRQDLLETAVVVEQMRSGGIEALRIPANPLDVLAQQVVA 537 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETG 530 A AMD V E ++ VRRAAPW DL R V ++ L+ML+GRYPS DF+ RP+LVW+R Sbjct: 538 ACAMDDWSVGELHTMVRRAAPWSDLSRAVLESVLEMLTGRYPSEDFADLRPRLVWDRVDD 597 Query: 531 ILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITL 590 +LTARPGAQ LA+ SGGTIPDRG++ V L G ELDEEMVYESRV D+ TL Sbjct: 598 LLTARPGAQRLAILSGGTIPDRGLFGVFLAGGGGPGRRVG--ELDEEMVYESRVGDVFTL 655 Query: 591 GATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG--AFF 648 G +SWRI+ IT DQV+V+PAPG+ +LPFW G+G GRPAELG +G F+ LA G A Sbjct: 656 GTSSWRIEDITHDQVLVSPAPGQPGKLPFWHGDGLGRPAELGGHLGAFVRELATGDEATL 715 Query: 649 SGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRR 708 + +E + N+ + Q AT VP R +V+ER RDE+GDWR+++HSP+G Sbjct: 716 RARLTDGGLDEWAVDNVLAHVAAQAEATTAVPDDRTVVVERFRDELGDWRVVIHSPWGSP 775 Query: 709 VHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDG--------------------- 747 VH PWA+ +A R+ +G D + +DDGIV R+PD G Sbjct: 776 VHAPWALVLAERLRQRFGVDVQALHADDGIVLRLPDLGGWDAWAVPDAVAPAGAPGGGAG 835 Query: 748 -------------------------KLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 + + +PE++ V +G SALFA+RFRE Sbjct: 836 GPVGAPGDGADAAASGTVALDARSLDVALGELVALDPEEVHDEVTALIGGSALFASRFRE 895 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 CAARALL+P R P R LWQQR RA+ LLE+A G+P+FP++LE +RE +QDVYD+PAL Sbjct: 896 CAARALLLPRRRPDRRQALWQQRQRAASLLEVAAGHPEFPIVLEAVREVVQDVYDVPALT 955 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 LMRRL G E+++S V T T SPFA +L+FGYVA+F+Y+ D+PLAERRA+ L+LD LL Sbjct: 956 ALMRRLAGREVRLSFVETPTASPFAQNLMFGYVAQFLYEGDSPLAERRAAALALDPTLLA 1015 Query: 903 NLLGQVD---PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 +LLG+ D +LLDPQ + E ELQ A RRA+ E L DLLR LGP+ +LA R Sbjct: 1016 DLLGRSDGTQLRDLLDPQAVADTEAELQHTAVDRRARHAEDLADLLRVLGPLDDAELAAR 1075 Query: 960 HTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHR 1019 + A++ L +RI + G++ A ++D ARLRDALGV +P +P+ + Sbjct: 1076 SVPEG-DPAAWTAELEGARRIVRVPVGGRDCWAVVEDVARLRDALGVPVPPGIPQAAMVV 1134 Query: 1020 VSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ-------- 1071 + PL DL +R+ R H AE LA + LG A+V L++L G V Sbjct: 1135 STDPLTDLLVRHARTHGPFRAEALAERYGLGRAVVVAALRELVRSGRVGEGALLPTALGG 1194 Query: 1072 -------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPAL 1124 + +V RRLR RSL A R PV +AR +L QG+ Sbjct: 1195 RDTDDGVGPDFCDADVLRRLRRRSLAALRAEVEPVDGDDFARFVLRWQGL---------- 1244 Query: 1125 FASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIW 1184 GVD V R +EQL G LPAS ES +LPARVRDY+ MLDELLATG +W Sbjct: 1245 -----EDPGRGVDAVARALEQLTGAVLPASAVESVVLPARVRDYAPGMLDELLATGEFLW 1299 Query: 1185 SGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQR 1244 L DD V+ H + A + A+ D S L + +L GA + Sbjct: 1300 VSHGLLAGDDLWVSFHPADQAEATLPLAQEDPDRASGL---VRELLTTRGAMRWADLRTA 1356 Query: 1245 IRDKIGESVDL------SALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR 1298 + + D + +A+W LV QG T D +AP+RA + + R+ R Sbjct: 1357 HQGARADDADPVHLSTDTQWTDAVWDLVGQGRATCDTFAPVRARLAGGRTTQKTRPRARR 1416 Query: 1299 AR-RGRPVYAQPVSP------RVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYG 1351 AR GRP Q +S R LAGRWS+L + T R +A AE LDR+G Sbjct: 1417 ARLSGRPASLQGLSGAAVRRDRPVSTPDVLAGRWSVLPERDDDPTVRAVAAAEVALDRHG 1476 Query: 1352 IISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLAT 1411 +++R AV AE + GGF ++ + + ED+GR+ RG FV+GLG AQFA +D LR Sbjct: 1477 VVTRGAVAAEEVAGGFSALYKVLAAAEDAGRVRRGYFVDGLGAAQFATAGAVDLLRG--- 1533 Query: 1412 QATQTRHYTPVALSANDPANVWGNLLPWPA-HPATLVPTRRAGALVVVSGGKLLLYLAQG 1470 + LSA DPA V G LPWP P+R+AGALV + G ++ +G Sbjct: 1534 ---EQPRVQARLLSACDPAVVHGAALPWPETTGGGHRPSRKAGALVALVEGVPAVWWERG 1590 Query: 1471 GKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR--QTPMFTLLREAGF 1528 G+ L + E LA A A+R ++ ++ ++P+ L AGF Sbjct: 1591 GRTALTFTLDPEALAQAAEVA-ARAVRERRIAGLSVETIDGEAALRTESPLVAALEAAGF 1649 Query: 1529 SSSPQGLD 1536 ++P+G Sbjct: 1650 GATPKGWR 1657 >UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinomycetales RepID=C6W9K2_ACTMD Length = 1606 Score = 1313 bits (3397), Expect = 0.0, Method: Composition-based stats. Identities = 681/1406 (48%), Positives = 862/1406 (61%), Gaps = 59/1406 (4%) Query: 48 LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107 LVIAPTGSGKTLAAFL+ALDRL +E D R+ R+LY+SP+KAL DV+RNL+ Sbjct: 38 LVIAPTGSGKTLAAFLWALDRLAQEPPPD----EPRERCRVLYVSPLKALAVDVERNLRA 93 Query: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR 167 PL GI RR G E + VG+RTGDTPA R R PPD+L+TTPESL+L+LTS AR Sbjct: 94 PLAGIRQASRRLGLPEPAIEVGMRTGDTPADVRRAFARKPPDVLVTTPESLFLVLTSAAR 153 Query: 168 ETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL 227 E+LRGV TVI+DEVHAVAG+KRGAHLALSLERLD LL AQRIGLSATVR +V+AFL Sbjct: 154 ESLRGVRTVILDEVHAVAGTKRGAHLALSLERLDGLLERPAQRIGLSATVRPVEEVSAFL 213 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDV-SSVASGTGEDSHAGREGSIWPYIETGIL 286 G RPV VV P + + ++R+ VPV +M + +G + R SIWP +E +L Sbjct: 214 AGGRPVRVVQPESAKTIEVRVEVPVEDMSALGEPTGEVSGSAAGGERRTSIWPAVEQRVL 273 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA---------------- 330 + V HRSTIVF NSR LAE+LTARLNEL A + A Sbjct: 274 ELVREHRSTIVFANSRRLAERLTARLNELAAEAAEGGGPGADGPGADGLGEGAGQGGSGS 333 Query: 331 --AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 A F + + S IAR+HHGS+S+EQR E+ LKSG L CVVATSSLELG Sbjct: 334 AVARFPAAAVGQSGVTVQEGPVIARAHHGSMSREQRTSVEEELKSGRLPCVVATSSLELG 393 Query: 389 IDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFA 448 IDMGAVDLV+QV P +VASGLQR+GRAGHQVG VS+G+ FP+ R DLV AV+ E M Sbjct: 394 IDMGAVDLVVQVEAPPTVASGLQRVGRAGHQVGAVSRGVVFPKFRGDLVSCAVVAERMRD 453 Query: 449 GRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 G +E + P NPLDVLAQ VA A++ V++ VR AAP+ LP A LDML+ Sbjct: 454 GAIEAVRYPRNPLDVLAQHVVAMVALEPWSVEDLARVVRGAAPFAGLPESALLAVLDMLA 513 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGS 568 GRYPS +F RP++ W+R TG L RPGAQ LAVTSGGTIPDRG+++V+ P E K GS Sbjct: 514 GRYPSEEFGELRPRITWDRVTGELRGRPGAQRLAVTSGGTIPDRGLFAVMTPASESKPGS 573 Query: 569 RRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRP 628 R VGELDEEMVYESRV D LG +SWR++ IT D+V+V PAPG+ AR+PFW+G+ GRP Sbjct: 574 R-VGELDEEMVYESRVGDTFLLGTSSWRVEDITHDRVVVVPAPGQPARMPFWKGDAPGRP 632 Query: 629 AELGEMIGDFLHLLAD--GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLV 686 ELG +G FL ++ G +E AN+ ++EQR ATG VP R ++ Sbjct: 633 LELGRALGRFLREVSALPEPEAVGRAAAAGLDEWATANLLTYLKEQREATGHVPSDRAVL 692 Query: 687 LERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTD 746 +ER RDE+GDWR+++HSP+G +V+ PWA+AI R+ G DA V SDDGIV R+PD Sbjct: 693 VERFRDELGDWRLVVHSPFGAQVNAPWALAIGARLRERRGVDAQVAHSDDGIVVRLPDAV 752 Query: 747 GKL-----PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPL 801 A L +P+++ Q+V VG SALFAARFRECAAR+LL+P R P RTPL Sbjct: 753 DAEGGQAVAGAEDVLLDPDEVEQVVVAEVGGSALFAARFRECAARSLLLPRRDPRRRTPL 812 Query: 802 WQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTT 861 WQQR RA+QLL +A Y FPV+LE +RECLQDVYD+P L LM + +++ +V T Sbjct: 813 WQQRQRAAQLLSVASKYESFPVVLEAMRECLQDVYDVPGLRELMADVRARRVRVVEVETP 872 Query: 862 TPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQ 921 +PSPFA SLLFGYV F+Y++D PLAERRA+ LSLDS LL LLG ELLDP+V+ + Sbjct: 873 SPSPFARSLLFGYVGMFLYEADTPLAERRAAALSLDSALLAELLGSEAIRELLDPEVLEE 932 Query: 922 VEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIF 981 VE LQRLAP R A+ EG DLLR LG ++ E+ A+R +L L+A +R Sbjct: 933 VERALQRLAPDRHARDAEGAADLLRFLGDLSEEEAAERGVR-----PEWLTELVAARRAI 987 Query: 982 PAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAE 1041 I+G ER+ ++DA R+RDALGV LP +PE++ V+ PL DL RY R H A Sbjct: 988 RVRIAGHERVITIEDAGRVRDALGVALPVGVPEVFTEPVADPLGDLLGRYARTHGPFPAG 1047 Query: 1042 QLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QDIWVSDEVFRRLRLRSLQAAREA 1095 Q A F LG+A+V L+++ G ++ + + EV RRLR SL R Sbjct: 1048 QAAERFGLGVAVVTGVLERMAATGRLVRGELRPGGTHTEYCDAEVLRRLRRSSLARLRSE 1107 Query: 1096 TRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASL 1155 PV R L GV G+P D V V+EQLAG LPAS Sbjct: 1108 VEPVEPAALGRFLPGWHGVGRRVRGAPT------------ADDVYAVVEQLAGAPLPASA 1155 Query: 1156 WESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEAD 1215 ES +LPAR+ Y +LDEL A G V W+G L DG VAL + A + Sbjct: 1156 VESLLLPARLPGYHPALLDELTAAGEVTWTGCGALAGGDGWVALAPTDVADLLLPDLVPE 1215 Query: 1216 QANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDI 1275 A S L A+V LA GGA F +Q+ R+ + + ALW LVW G++T+D Sbjct: 1216 SAPESPLHTAVVEALA-GGALFFRQVVDRV--ALQGPTTDQEVVGALWDLVWAGLVTNDT 1272 Query: 1276 WAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND 1335 APLRAL A R + R R R +P P P +AGRWSL V + Sbjct: 1273 LAPLRALVSGGG-AHKPKRTTPRGRYARMRATRPDMP-SRTGPPTVAGRWSLAVVPSPDP 1330 Query: 1336 TERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGA 1395 T R A AE L+R+G+++R A+ E + GGF ++ + R+ME+SG+++RG VEGLG A Sbjct: 1331 TRRAHARAEAFLERHGVLTRGALDTERVTGGFSAVYRVLRAMEESGQVVRGYVVEGLGAA 1390 Query: 1396 QFAERLTIDRLRDLATQATQTRHYTP 1421 QFA R +DRLR L+ +T Sbjct: 1391 QFAARGAVDRLRALSAPPDRTGSEWA 1416 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%) Query: 1409 LATQATQTRHYTPVALSANDPANVWGNLLPWPAH--PATLVPTRRAGALVVVSGGKLLLY 1466 + + + T V L+A DPA +G L WP P R+AGAL V+ G+ +LY Sbjct: 1475 VRSAGSAGSGPTTVVLAAADPAQPYGAALSWPEQVGGGKHRPGRKAGALAVLVDGEAVLY 1534 Query: 1467 LAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREA 1526 + +GGK +L + E++E L L A+R + ++ + + + +L+EA Sbjct: 1535 VERGGKSLLSFTEEDEPL-RAAAQGLGRAVRDGWLGQLSVQRADGEVALGSKLAGVLQEA 1593 Query: 1527 GFSSSPQGLD 1536 GF ++P+GL Sbjct: 1594 GFRATPKGLR 1603 >UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Micrococcineae RepID=C5BWN7_BEUC1 Length = 1668 Score = 1311 bits (3392), Expect = 0.0, Method: Composition-based stats. Identities = 677/1646 (41%), Positives = 887/1646 (53%), Gaps = 154/1646 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS TR WF +F PT Q W A +HALV+APTGSGKTLAAFL+ALD L Sbjct: 42 FSEPTRTWFAESFPAPTEAQAGAWEAIAGGDHALVVAPTGSGKTLAAFLWALDALL---- 97 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + R+LYISP+KAL DV+RNL+ PL GI+ R+G ++RVG+RTGD Sbjct: 98 -GAEAPDDAERCRVLYISPLKALAADVERNLRSPLVGISRIAARQGHPVRDVRVGMRTGD 156 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA ER + P DILITTPESL+L+LTS AR L GV TVI+DEVHA+AGSKRGAHLA Sbjct: 157 TPAGERRRFATKPTDILITTPESLFLVLTSAARAGLAGVTTVILDEVHALAGSKRGAHLA 216 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFL-------GGDRPVTVVNPPAMRHPQIR 247 LSLERLDA+L AQRIGLSATVR +V FL G R V V PP+ + +I Sbjct: 217 LSLERLDAMLPRPAQRIGLSATVRPVEEVGRFLAGARTIGDGGRSVRTVQPPSHKEIRID 276 Query: 248 IVVPVANMDDVSSVASGTGE--------DSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 + VPV +++D+ R S+WP++ ++D + HR+T+VFT Sbjct: 277 VEVPVPDLEDLGDAERELDLSGDAAGLLPDARPRTASVWPHVTERVVDIISAHRTTLVFT 336 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR------ 353 NSR AE+LTAR+NE +A R D + + S DV A Sbjct: 337 NSRRGAERLTARINEAWAERRLAVEGAIADDGDGDGDGDPGYDVDPSDDVEGAAPPADPG 396 Query: 354 -------------------------SHHGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 +HHGS+S+E+R E LK+G L VVATSSLELG Sbjct: 397 SAWGAQTPGQSGTALAVAGDAVVARAHHGSMSREERTRIEDDLKAGRLPAVVATSSLELG 456 Query: 389 IDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFA 448 IDMG++D+V+QV P SVAS LQRIGRAGHQVG VS G+ P R DL+ +AV Sbjct: 457 IDMGSIDVVVQVGAPPSVASELQRIGRAGHQVGAVSHGVVLPTHRGDLLAAAVAAVRGRE 516 Query: 449 GRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 G +E+L P NPLDVLAQQ VA AMD +V E + VRRAAP+ L A LDML+ Sbjct: 517 GAIEHLHIPANPLDVLAQQVVAMLAMDDWKVAELTALVRRAAPYAGLGDASLAAVLDMLA 576 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA-- 566 GRYPS DF+ RP++VW+R +L+ARPGA LA TSGGTIPDRG+Y V L G E Sbjct: 577 GRYPSEDFAELRPRIVWDRVDDVLSARPGALRLAATSGGTIPDRGLYGVYLAAGAEDVAT 636 Query: 567 -GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGN 625 G RRVGELDEEMVYESRV D TLG ++WRI+ IT D+V+V+PA G RLPFWRG+ Sbjct: 637 RGGRRVGELDEEMVYESRVGDTFTLGTSTWRIEDITPDRVLVSPAAGLPGRLPFWRGDAP 696 Query: 626 GRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHL 685 GRP ELG +G + + + + W +E N+ + QR ATG + + Sbjct: 697 GRPFELGAALGAMVRDVERAREPAELLTGWGLDEWARDNLLAYLTAQREATGHLSTDHTI 756 Query: 686 VLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDT 745 V+ER RDE+GDWR+++H+P+G RVH PWA+A+A R+ +G D + +DDGIV R+PD Sbjct: 757 VVERFRDELGDWRLVIHTPFGARVHAPWALALASRLQDRFGMDVQAMHADDGIVLRLPDA 816 Query: 746 DGKLPDAAIFLFE--------------------------PEKLLQIVREAVGSSALFAAR 779 G D P+++ V A+ SA FAAR Sbjct: 817 GGGDDDLGAVPLPGGWPDAAAADSAGPGTQVDLADLLLDPDEVSGAVTAALAGSAHFAAR 876 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 FRE AARALL+P R P R PLWQQR RA+QLL +A YPDFP++LE +RECLQD +D+P Sbjct: 877 FREAAARALLLPRRRPDRRQPLWQQRHRAAQLLGVAARYPDFPIVLEAVRECLQDDFDVP 936 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 AL LMR++ EI++ +VTTT PSPFA SLLFGYV +F+Y DAPLAERRA+ L+LD Sbjct: 937 ALADLMRQVAAREIRVLEVTTTAPSPFARSLLFGYVGQFLYDGDAPLAERRAAALTLDPA 996 Query: 900 --LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 G D +LLD + VE ++ L R + EG FDL+R LGP+ E++A Sbjct: 997 LLGELLGEGLTDLADLLDAGAVADVEAQVGLLTEASRVRDAEGAFDLVRRLGPVPAEEVA 1056 Query: 958 QRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYL 1017 +R E V +L +L +RI ++G+E+ + +DA RLRDALG LP LP L Sbjct: 1057 RR-ALDPEAVPGWLADLERQRRIIAVRVAGREQWSAAEDAGRLRDALGTALPLGLPAAVL 1115 Query: 1018 HRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN-------- 1069 V P DL R+ R H TA ++AH F L V L+ G + Sbjct: 1116 ESVPDPFGDLVRRHARTHGPFTAAEVAHRFGLAPGAVLPVLRTFERDGTLTAGRLRPAAS 1175 Query: 1070 ------------LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPA 1117 ++ + EV RR+R RSL A R V T L Q + Sbjct: 1176 GASAGSDGVPEPGAREEFCDSEVLRRIRRRSLAALRADVEAVPPATLGVFLPRWQQL--- 1232 Query: 1118 TDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELL 1177 G G DGV+ ++QLAG LP+S E+ +LPARVRDY+ MLDEL Sbjct: 1233 -------------GTLRGTDGVLAAVDQLAGARLPSSALETTVLPARVRDYAPAMLDELT 1279 Query: 1178 ATGAVIWSGQKKLGEDDGL---VALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGG 1234 + G V+W G + L + AA + L + +V VLADGG Sbjct: 1280 SAGEVVWVGTGGSPGGGPSDGTIVLVPTDAAAVLAPLPGELP---TELARRVVEVLADGG 1336 Query: 1235 AWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS-- 1292 +F + GE ++ + +ALW VW G +T+D APLRA + + Sbjct: 1337 RFFRDLYAAIASAADGEPPAVAEVHDALWDAVWAGHVTNDTLAPLRARLEQRPSTSSRRA 1396 Query: 1293 ------------TRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERML 1340 +RR+ + + AGRWS++ + T R+ Sbjct: 1397 AAARSPRSRSALSRRALMTPALAAAGSTAAQAARIPTPASAAGRWSVVGAVETDPTIRLA 1456 Query: 1341 ALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAER 1400 A A +LDR+G++ R AV AE +PGGF ++ + +E+SG++ RG VEGLG +QFA Sbjct: 1457 ATAAALLDRHGVLVRGAVAAEEVPGGFGALYRVLVRLEESGQVRRGYVVEGLGASQFALP 1516 Query: 1401 LTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHP-------ATLVPTRRAG 1453 IDRLR A + PV L+A DPAN +G LPWPA P P R G Sbjct: 1517 ECIDRLR-----ADAAANPGPVLLAAVDPANPYGAALPWPAAPTSAEGVTTGARPRRVPG 1571 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLP 1513 A VV+ G L+LYL +G + +L + + L A R + + Sbjct: 1572 AHVVLVDGALVLYLERGARTLLSFTADDARLRAAAAALANAAAS-GALGRVVVQRSDGAA 1630 Query: 1514 --VRQTPMFTLLREAGFSSSPQGLDW 1537 V TP+ L +AGF ++P+GL Sbjct: 1631 TLVADTPLRQALLDAGFVATPRGLRV 1656 >UniRef50_A1A256 ATP-dependent helicase II n=4 Tax=Bifidobacterium RepID=A1A256_BIFAA Length = 1625 Score = 1300 bits (3365), Expect = 0.0, Method: Composition-based stats. Identities = 673/1696 (39%), Positives = 902/1696 (53%), Gaps = 262/1696 (15%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR- 71 D+FS T+ WF AF PT Q W E+ LV+APTG GKTL AFL A+DRL Sbjct: 17 DLFSEPTKAWFKHAFNAPTEAQRLAWPAIRSGENVLVVAPTGFGKTLCAFLSAIDRLMTK 76 Query: 72 ----------------EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 E + ++ + ++LYISP+KALG DV +NLQ PL GIA + Sbjct: 77 EGDDLLRTSGGGDGTAESDCNAKKRKPVRGVKVLYISPLKALGVDVAKNLQAPLAGIAGQ 136 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVET 175 G + VGIR+GDT QER ++ +PPDIL+TTPESL+L+LTS+AR L V+T Sbjct: 137 CEAMGLPSPKVSVGIRSGDTTPQERRRIVSHPPDILVTTPESLFLLLTSKARRILSAVDT 196 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 VI+DEVHA+AGSKRGAHLALSLERL++L S QRIGLSATV ++ A FLGG RPV V Sbjct: 197 VIVDEVHAIAGSKRGAHLALSLERLESLAGRSVQRIGLSATVEPPAEAARFLGGIRPVRV 256 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTG----------------------------- 266 + P + +++V P++ M D S +G Sbjct: 257 IRPESHPDMDLKVVEPLSAMRDPVSDDAGRRAGAVKLPNRHTTHISGVSPAMEALAERKG 316 Query: 267 --------EDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL------ 312 S GS+WP IE +LDEVL+H +T+VF NSRGLAEKLTARL Sbjct: 317 LTSVGGDEHTSRVSTGGSVWPAIERSVLDEVLKHHTTLVFVNSRGLAEKLTARLNDLYAQ 376 Query: 313 ------------------------NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSD 348 L L S + + + ++ + Sbjct: 377 LCTSRKTGSETAVKADAGRDALSDRRLGRTDLSVSDNASQPESTASDSTQPYPDLGSPEG 436 Query: 349 VFIAR-------------------------SHHGSVSKEQRAITEQALKSGELRCVVATS 383 +HHGSVSK++R E+ LK G+LRCVVATS Sbjct: 437 REGFAKHYDSVVGSTTMLVSSHADADAIAMAHHGSVSKDRRKQIEEQLKRGQLRCVVATS 496 Query: 384 SLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIV 443 SLELGIDMG+VDLVIQ+A PLSV+SGLQR+GRA H+VGGVS LF+P TR ++ +A + Sbjct: 497 SLELGIDMGSVDLVIQIAPPLSVSSGLQRVGRADHKVGGVSHALFYPITREQIIGTAASI 556 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 ECM +G +E LT P PLDVLAQQTVAAAAMD L+ D+WY VR+AAP++DL R +FDA Sbjct: 557 ECMRSGDIETLTIPCTPLDVLAQQTVAAAAMDDLKPDDWYVTVRKAAPFEDLDRTMFDAV 616 Query: 504 LDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE 563 + M++G Y DFSAFRP L +N E G+++ARPGAQ LAVTSGGTIPDRG Y+V+LPE Sbjct: 617 MGMMTGAYNGEDFSAFRPPLQYNEEAGLISARPGAQRLAVTSGGTIPDRGTYTVVLPEEG 676 Query: 564 EKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE 623 G R+VGELDEEMVYESRV D+ITLG ++W+IQ+ITRD+V+V PAPGR+ARLPFW GE Sbjct: 677 SGPGPRKVGELDEEMVYESRVGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLPFWHGE 736 Query: 624 GNGRPAELGEMIGDFLHLLADGAFFS------------------GTIPPWLAEENTIANI 665 G+GR A G G F+ +A G + ++N I N+ Sbjct: 737 GDGRDAAFGRSQGRFIRDMAQGLRAEVSDGIAGDKTSRFDTTTIARLRRDGLDDNAIGNL 796 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 L+ EQR ATG +P R LV+ERC+DE GDWR+I+HSPYGRRVHEPWA+AI RI + Sbjct: 797 ADLLAEQRAATGTIPNDRELVVERCQDEEGDWRVIVHSPYGRRVHEPWAMAITTRIKQRY 856 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G D V A+DDGI+ R+PD DG LP + LF+ E+L +I+ VG S L+AARFRECAA Sbjct: 857 GFDGQVYAADDGIIIRLPDGDGNLPIRELLLFDTEELQRIIETQVGESVLYAARFRECAA 916 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 R+L +P PG R PLWQQRLRA+QLL A+ +FP++LET RECLQDVYDLPAL+ +M Sbjct: 917 RSLFLPRANPGRRVPLWQQRLRAAQLLNAARTRKNFPLLLETARECLQDVYDLPALKHVM 976 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 L G I +S+ T TPSPFA ++LFGYV MYQ D P AER +LS+D E+L LL Sbjct: 977 SGLRSGVISLSETVTETPSPFAENMLFGYVGAVMYQYDVPQAERSTQLLSMDPEVLERLL 1036 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEE---GLFDLLRELGPMTVEDLAQRHTG 962 G D LLD VI QV +EL + + ++ GP T + + Sbjct: 1037 GATDMASLLDADVIAQVGKELAGRTFWNDLDETDIAGRVARYVKTHGPFTADQMIAELGL 1096 Query: 963 SSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSY 1022 + + L+ L A + A DA D+ R P P+ +LH Sbjct: 1097 DAVQGVRMLDELHAKGELLKGHFVDD---AAGADANGSDDSASERSPRQTPQQWLH---- 1149 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFR 1082 +D+F R L L + + + + Sbjct: 1150 --KDVFRR------------------------IRAL-SLAKARKAIKPVEPAVYQAFLLD 1182 Query: 1083 RLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRV 1142 R QGV P YE VDG+MRV Sbjct: 1183 R----------------------------QGVGPVGGA-----------RYESVDGLMRV 1203 Query: 1143 IEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQ---KKLGEDDGLVAL 1199 IEQL G+ L AS+WES + PARVRDY MLDELLA+G V+W G ++ G +A Sbjct: 1204 IEQLEGIYLNASVWESSVFPARVRDYQPSMLDELLASGDVVWVGSKINGSNAKEAGGIAF 1263 Query: 1200 HLQEYAAESFTPAE----ADQANRSALQQAIVAVLADGGAWFAQQISQR----------- 1244 H + + + A A + + I+AVL++GGA+ A+Q+S Sbjct: 1264 HPADSRLLTKPGEQSQNNAYSAGTMTVPETILAVLSNGGAFHARQLSTAAKAIWQEHAEV 1323 Query: 1245 -IRDKIGESVDLS----ALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRA 1299 + + GE + + +EALW+LVWQG +T+ +AP+RALT+ + + Sbjct: 1324 NVNPETGEIILPAWGESQFEEALWSLVWQGKVTNSSFAPVRALTQGTVSV---------- 1373 Query: 1300 RRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND------------------TERMLA 1341 R A+ + L G WS + + E +A Sbjct: 1374 -RAPRTAARRRVRIHASTPATLGGLWSAVDSSRTSPMAIPDQTDDTAGKPTAGIEEYDIA 1432 Query: 1342 LAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERL 1401 L E++LDRYG+I+ + E + GGF + + + ME+ G ++RG FV+G G AQFA R Sbjct: 1433 LIESLLDRYGVIAAPLIDKEQVAGGFSGLYPVLKRMEEHGNLVRGMFVKGFGAAQFAGRD 1492 Query: 1402 TIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGG 1461 T+D LR + R + VAL DPAN+ G+ + WP + P RA +++V+ G Sbjct: 1493 TVDALR----GDDEARSQSCVALDVTDPANLTGSAITWPEQ-HHMKPACRAESVIVLDHG 1547 Query: 1462 KLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTP-MF 1520 +L+ +++ + + E +L P L AL+ + + + E+N +++ Sbjct: 1548 MPVLFAVPKSHRIVSFTDDERILQPAC-TELAYALQHQSKGSVSFAEMNGESLKERNEYR 1606 Query: 1521 TLLREAGFSSSPQGLD 1536 LL AGF SPQG+ Sbjct: 1607 RLLHAAGFVDSPQGMK 1622 >UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria RepID=Q2IJM9_ANADE Length = 1536 Score = 1298 bits (3359), Expect = 0.0, Method: Composition-based stats. Identities = 652/1589 (41%), Positives = 880/1589 (55%), Gaps = 124/1589 (7%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 MA +PD +++ F PA R WF RAF+ PT Q W R E L++APTGSGKTLA Sbjct: 1 MARSPDAAAVP---FHPAVRAWFERAFQAPTRAQALGWPPIHRGESTLLLAPTGSGKTLA 57 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL +DRL + E +R+ R++Y+SP+KAL DV+RNL+ PL GIA RG Sbjct: 58 AFLSCIDRLM-----FSPEPPRRERLRVVYVSPLKALAVDVERNLRAPLAGIAQVAAERG 112 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE 180 + V +RTGDTPA ER++ R+P D+LITTPESLYL+LT ARE LR VETVI+DE Sbjct: 113 DAHRIPSVAVRTGDTPAAERARFARDPADVLITTPESLYLLLTQAAREGLRTVETVIVDE 172 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG------------ 228 +HA+ SKRGAHLALSLERL+ L QRIGLSAT R +VA FLG Sbjct: 173 IHALVPSKRGAHLALSLERLEQLAGRPLQRIGLSATQRPLDEVARFLGGARPAAPAGAGE 232 Query: 229 ---------------GDRPVTVVNPPAMRHPQIRIVVPVANMDDV-SSVASGTGEDSHAG 272 RPVTVV+ + + ++ + VPV +M + + G+ S A Sbjct: 233 AEGALGELRDRAARPAWRPVTVVDAGSRKALELTVEVPVEDMARLGEPLDLPGGDASQAP 292 Query: 273 REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH 332 SIW I +L+ V HR+T++F NSR +AE+L LNEL L Sbjct: 293 PRASIWTAIHPRLLELVKAHRTTLLFVNSRRVAERLAGALNELAGETL------------ 340 Query: 333 FESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMG 392 ++HHGS+++ QR E LK+G +R +VATSSLELGIDMG Sbjct: 341 -------------------VQAHHGSIARPQRIAIEDNLKAGRVRGLVATSSLELGIDMG 381 Query: 393 AVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE 452 +VDLV+Q+ P SVASG+QRIGRAGHQVG S G+ FP+ R DLV A + E M G +E Sbjct: 382 SVDLVVQIEAPPSVASGMQRIGRAGHQVGAPSAGVLFPKYRGDLVACAALTEAMQEGDVE 441 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 NPLDVLAQQ VA ++D +VD+ ++ +R AAP+ +LPR + + LD+LSGRYP Sbjct: 442 ATRYLRNPLDVLAQQIVAMVSLDDWRVDDLHAALRGAAPFAELPRGILEGVLDLLSGRYP 501 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVG 572 S + + RP++ W+R G+L AR GA+ +AV SGGTIPDRG+Y V L G + G RVG Sbjct: 502 SEELAELRPRVTWDRVRGVLRAREGARRVAVVSGGTIPDRGLYGVYLLGGAK--GQARVG 559 Query: 573 ELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELG 632 ELDEEMV+E+ V + TLGA++WR+++IT D+V+V+PAPG ++PFW G+ RP ELG Sbjct: 560 ELDEEMVFETAVGETFTLGASTWRVEEITHDRVLVSPAPGEPGKMPFWHGDAAARPVELG 619 Query: 633 EMIGDFLHLLA---DGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLER 689 IG + L A + N+ +E+Q+ A G VP R +++ER Sbjct: 620 RRIGRLVRELRGVPRAAALERLRARHGLDARAAENLVRYLEDQQQAAGAVPDDRTVLVER 679 Query: 690 CRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 CRDE+GDWR+ + +P+G V PW +A A R GAD + ++DG R+P+TD Sbjct: 680 CRDELGDWRVCVLAPFGSAVLVPWCMAAARRARDRLGADPETLWTNDGFALRLPETDQPP 739 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 +F EPE++ +V E +G++ALFAARFRE +ARALL+P R PG RTPLWQQR RA+ Sbjct: 740 EVDFLF-PEPEEVEALVVEQLGATALFAARFREASARALLLPRRRPGQRTPLWQQRKRAA 798 Query: 810 QLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATS 869 LL +A + FP++LE RECL+DV+DLPAL LMR L G ++ + T PSPFA S Sbjct: 799 DLLAVASRFAQFPLLLEAYRECLRDVFDLPALVELMRDLKAGRVRRAVADTRVPSPFAGS 858 Query: 870 LLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRL 929 LLFG+VA F+Y DAPLAERRA L++D LR LLG+ + ELLD + +E LQ L Sbjct: 859 LLFGFVASFIYDGDAPLAERRAQALAIDQAQLRELLGEAELRELLDADALADLEARLQLL 918 Query: 930 APGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQE 989 P R + +GL D+L LG ++ ++ +R S EVA+ L+ L+A +R P + G+E Sbjct: 919 RPELRVRSADGLADMLLRLGDLSRAEVERRSA--SPEVAASLDRLVAERRAVPLRVGGEE 976 Query: 990 RLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSL 1049 R ++DAAR RD LGV LP +PE L V L L R+ R HA TA +LA L Sbjct: 977 RFVAVEDAARYRDGLGVPLPPGVPEALLAPVPDALDGLVARHARRHAPFTAGELAARLGL 1036 Query: 1050 GIAIVEEQLQQLREQGLVMN------LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATT 1103 G A E L++L G ++ + W +V R LR RSL RE PV Sbjct: 1037 GRAAAERVLERLARAGRLLEGAFRPHGAEREWCDPDVLRTLRRRSLAKLREEIEPVEPRV 1096 Query: 1104 YARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPA 1163 R LL G+ G+D V+ +E+L G LPASL ES+ILPA Sbjct: 1097 LGRTLLGWHGITR---------------RAAGLDAVLDAVEKLQGAPLPASLLESEILPA 1141 Query: 1164 RVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQ 1223 RV Y LD L A G V W G + LGE DG VA+ L + PA A + + Sbjct: 1142 RVEGYLPGDLDALAAGGEVTWVGLEPLGERDGRVAIFLADALPALLPPAPAAEPPEDPRE 1201 Query: 1224 QAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 + I+ LA GA F ++ + +A+WALVW+G++T+D + + Sbjct: 1202 RRILDHLAHRGACFFPELHEAAGGGFA-----QQTVDAIWALVWRGLVTNDTF----QVL 1252 Query: 1284 RSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQ-------VEPLNDT 1336 R+ + R RARR A P GRW+L++ T Sbjct: 1253 RARAARAAPRRDRERARRTARRAAAAGYRSRLSAPPGAGGRWTLVEARRDAGGRPRPTPT 1312 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 + ALA+ +L RYG+++R AE +PGGF ++ + R +E+SGRI RG FV G+G Q Sbjct: 1313 QWSAALAQQLLARYGVVTRGVAAAEALPGGFGAVYDVLRHLEESGRIRRGYFVAGVGAMQ 1372 Query: 1397 FAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPA---TLVPTRRAG 1453 FA+ +D LR V L+A DPAN WG L+ WP P P R G Sbjct: 1373 FAQPGALDLLRASRE---PGEAPEVVTLAAADPANAWGALVEWPPVPGAPEGKRPARAVG 1429 Query: 1454 ALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEV------FHALTTALRREPRLRFTLT 1507 A VV+ G + A+G +++L W ++E V A L Sbjct: 1430 AEVVLVDGAPGAWAARGLRQVLAWLPEDEPDRSRVGEAVAGALAALARDALARGEGALLE 1489 Query: 1508 EVNDLPVRQTPMFTLLREAGFSSSPQGLD 1536 EVN + P+ L +AGFS + L Sbjct: 1490 EVNGVAAATHPLAGFLVQAGFSPAGTALQ 1518 >UniRef50_Q67R22 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67R22_SYMTH Length = 1466 Score = 1262 bits (3265), Expect = 0.0, Method: Composition-based stats. Identities = 604/1564 (38%), Positives = 832/1564 (53%), Gaps = 149/1564 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F PA R WF F +P+ Q Q W AR E+ L++APTGSGKTLAAFL LD L+++ Sbjct: 7 ETFHPAVRAWFEERFGRPSPPQAQGWPAIARGENVLILAPTGSGKTLAAFLKCLDILYQQ 66 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++LYISP+KAL D+ RNL+IPL GI + R G +L +RT Sbjct: 67 G------VRREPGVQVLYISPLKALNNDIYRNLEIPLAGIEAKARELGLPLPHLTHAVRT 120 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP QER ++ RNPPDILITTPESLYL+LTSR+R+ LR V VI+DE+HA+ SKRGAH Sbjct: 121 GDTPQQERKEMRRNPPDILITTPESLYLLLTSRSRDILRTVRYVIVDEIHALCTSKRGAH 180 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVP 251 L+LSLERL+ALL RIGLSAT+R +VA +LGG RPVT+V+ A R +R+ VP Sbjct: 181 LSLSLERLEALLPRPPVRIGLSATLRPLEEVARYLGGTGRPVTIVDAGARRELDLRVEVP 240 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 VA+M + E SIWP I +L+ V HRSTIVF +SRGLAE+L + Sbjct: 241 VADMRALP--------------ESSIWPAIYRRVLELVAAHRSTIVFVSSRGLAERLAGQ 286 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 LN L + R HHGS+S+E R E L Sbjct: 287 LNALAGREVAR-------------------------------VHHGSLSREAREQVEAEL 315 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G L C+VATSSLELGID+GAVDLVIQ+ +P +V+ GLQR+GRAGH +G V+KG P+ Sbjct: 316 KAGRLPCLVATSSLELGIDVGAVDLVIQIESPGTVSRGLQRVGRAGHVLGAVAKGRLLPK 375 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 R DL+++A IV M G LE P LDVLAQQ VA AAMD +VD+ + VRRA Sbjct: 376 YRGDLLETAGIVREMRRGNLEETRVPTGALDVLAQQIVAMAAMDEWRVDDLLALVRRAWG 435 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++DL R L+ML+GRYP+ +F RP++VW+RE G++ R GA+ LAV SGGTIPD Sbjct: 436 YRDLTERQLHGVLEMLAGRYPAAEFRELRPRIVWDREVGVIRGREGARALAVLSGGTIPD 495 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 RG Y+V L + K +GELDEE VYESRV D+ LG+ +W+I+ I D+V+ PAP Sbjct: 496 RGYYTVYLEGSDVK-----LGELDEEFVYESRVGDVFLLGSATWQIRAIEHDRVVAAPAP 550 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLA----DGAFFSGTIPPWLAEENTIANIQG 667 GR R+PFW+GEG GRP ELG +G F +A D +E N+ Sbjct: 551 GRMPRMPFWKGEGPGRPPELGRKLGAFTGEVAARLNDPDLLQWLQAECCLDERAARNLVQ 610 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 + +Q TG+VP R LVLER DE+GD R+ L SP+G RV+ W + I RI L Sbjct: 611 YLRDQVAHTGVVPTDRRLVLERFPDELGDERLALLSPFGGRVNTAWGMVIRARIRQLLQL 670 Query: 728 DASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 +A V SDD I R+P D L + +PE+ + ++ + VG++ LF+A FR A RA Sbjct: 671 EAEVTTSDDVIHIRLPGADRPLDPEILVRVDPEEAVGLLLQEVGATPLFSAHFRMNAGRA 730 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 L++P PG R P W QRL+A+ LL++A+ YPDFP++LET RE L+DV DL L +++ Sbjct: 731 LVLPRPRPGRRRPFWLQRLKAADLLQVARRYPDFPLVLETYREVLRDVLDLEGLRQVLEG 790 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQ 907 L GEI+++ V T +PSP A+ +L +VAE+MY+ DAP AER ++L+L+ ELL LLG Sbjct: 791 LASGEIELAVVETDSPSPMASQILLQFVAEYMYEGDAPKAERHGALLTLNRELLDELLGS 850 Query: 908 VDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEV 967 ELLDP+ I V L+ A G + +G + + DLLR G MT +LA Sbjct: 851 GALRELLDPRAIAAVAARLRGQAEGWQPRGPDEVEDLLRRAGDMTEAELAAAGVS----- 905 Query: 968 ASYLENLLAVKRIFPAMISGQE---RLACMDDAARLRDALGVRLPESLPEIYLHRVSYPL 1024 +L L A +R + +G+ +DDA+ R + Sbjct: 906 PEWLARLEAERRAVRLIGAGRGDGAHWVHVDDASLYRR-----------------PEADV 948 Query: 1025 RDLFLRYLRAHALVTAEQLAHEF------SLGIAIVEEQLQQLREQGLVMNLQQDIWVSD 1078 ++ RY RAH +++A + A +L + Sbjct: 949 AEVVRRYARAHGPFRPDEVARRYALAEEDVAAAAEALATAGELAAGEFTRGATGREYCDP 1008 Query: 1079 EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDG------------------ 1120 EV R++R ++L R PV YAR LLE G+ P T G Sbjct: 1009 EVLRQIRRQTLTLLRAEVEPVDGAAYARFLLEWHGLRPPTPGSGAPGGAGPGGAWTNEGP 1068 Query: 1121 -----SPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDE 1175 + V ++R + QL G+ LPA LWE +ILP RV Y LD+ Sbjct: 1069 PGAVPPGTRPPGAALPVGSPPQALLRALRQLQGIPLPAELWEQEILPRRVPGYQPLWLDQ 1128 Query: 1176 LLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGA 1235 LLA G V W G +A +L + A + +Q ++A GA Sbjct: 1129 LLAAGEVHWVGSP-----GKRLAFYLPDDVHAFAGRLAAAPEGLTPVQAQVLAACRAAGA 1183 Query: 1236 WFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRR 1295 F +++R + + EALW L W G++T+D +AP+R + RS AR S R Sbjct: 1184 AFLGTVARRAG------LTPAEALEALWELAWMGLVTNDTYAPVREVLRSDRTARRSGRA 1237 Query: 1296 SHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISR 1355 + R G + R LAG +R+ A +LDRYG+++R Sbjct: 1238 AAVLRGG--------TGRWWPTGSLLAGD----PPAAGQPADRVEGYARLLLDRYGVVTR 1285 Query: 1356 QAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQ 1415 +AV A++ P + + R ME G + +G FV GL G QFA ++RLR Sbjct: 1286 EAVAADDGPAPWGEVLQQLRRMEWRGEVRQGYFVAGLTGVQFARADAVERLRGAR----G 1341 Query: 1416 TRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKML 1475 P+ ++A DPAN +G +LPWP R +V++ G+ +L + G +++ Sbjct: 1342 RTGAPPLLVNACDPANPYGTVLPWPE---GERLARVPSNYLVLADGRPVLGVEGHGSRLI 1398 Query: 1476 VWQEKEELLAPEVFHALTTALRREPRL----RFTLTEVNDLPVRQTPMFTLLREAGFSSS 1531 +E E ALT L+ R + D+PV+++P LR GF S Sbjct: 1399 PLVPLKEDRLAEALAALTGLLKAPGAARLRRRIEVRRWGDMPVQKSPAAEPLRALGFEPS 1458 Query: 1532 PQGL 1535 P+GL Sbjct: 1459 PRGL 1462 >UniRef50_C0E805 Putative uncharacterized protein n=2 Tax=Corynebacterium matruchotii RepID=C0E805_9CORY Length = 1759 Score = 1258 bits (3255), Expect = 0.0, Method: Composition-based stats. Identities = 557/1355 (41%), Positives = 777/1355 (57%), Gaps = 91/1355 (6%) Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV + +S A+ + SIWP+IE + ++ H+ST+VF NSR +AEKLTA Sbjct: 389 PVVSGATSASGAANLDVPVASDTTTSIWPHIEQHLYATIMAHQSTLVFVNSRRIAEKLTA 448 Query: 311 RLNEL------------------------YAARLQRSPSIAVDAAHFESTSGATSNRVQS 346 +LNEL + AR A + S+ + + Sbjct: 449 KLNELHAHACARDRAAGAHGGDDTDGADTWLARQAPPIPPAASRGQPPADMMKPSDEIVT 508 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV 406 + IAR+HHGSV++E+RA TE LK G ++ VVATSSLELGIDMGA+DLV+Q+ +P SV Sbjct: 509 APRDIARAHHGSVAQEERARTETLLKEGLIKAVVATSSLELGIDMGAIDLVVQIESPPSV 568 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 ASGLQR+GRAGH VG S G+F+P+ R DLV++AV V+ M AG +E + P N LDVL Q Sbjct: 569 ASGLQRVGRAGHIVGAASTGIFYPKHRADLVNTAVTVQRMRAGLIEEIRIPTNALDVLLQ 628 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 T+AA ++ V++W+ V RA P+ +L R VFDA +++ SG YPS DF+ RP+++++ Sbjct: 629 HTIAAVSVADWDVEQWFETVTRAYPYHNLDREVFDAVINLASGSYPSTDFAELRPRIIYD 688 Query: 527 RETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVND 586 R TG L+ARPGAQ +AVTSGGTI DRGM+ V L G E G+RRVGELDEEMVYESRV D Sbjct: 689 RITGTLSARPGAQRIAVTSGGTIADRGMFGVFLLGGGE--GARRVGELDEEMVYESRVGD 746 Query: 587 IITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGA 646 + TLGA+SWRI++ITRDQV+VTPAPG S RLPFW G+ GRPAEL +G+F +A Sbjct: 747 VFTLGASSWRIEEITRDQVLVTPAPGSSGRLPFWLGDQVGRPAELSRAVGEFRRAVAQSL 806 Query: 647 FFSGTIPP------------WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEI 694 +E NI+ I EQR+ TGIVP + L++ER RDE+ Sbjct: 807 AVESAEGAGEKPNAESEHIFDGLDEWASDNIRRFISEQRDVTGIVPDEKTLLVERFRDEV 866 Query: 695 GDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAI 754 GDWR++LHSPYGR V+ WA+A+ +I + G DA V+ DDGIV R+P++D +P A + Sbjct: 867 GDWRVVLHSPYGRGVNAAWALAVGAKISSDMGIDAQPVSGDDGIVLRLPESD-VVPGAGL 925 Query: 755 FLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEI 814 F +P+ + IV E VG+SALFAARFRECAAR LL+P PG R PLWQQR RA+QLL++ Sbjct: 926 FQIDPDDIADIVAEQVGNSALFAARFRECAARGLLLPRHNPGKRAPLWQQRQRAAQLLDV 985 Query: 815 AQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGY 874 A+ YP+FP+ILE +RECLQDVYDLPAL +L + G ++I++V T PSPFA ++LF Y Sbjct: 986 ARKYPNFPIILEAVRECLQDVYDLPALVQLCEDIKGMRVRIAEVETMQPSPFAVAMLFTY 1045 Query: 875 VAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRR 934 F+Y++D+PLAE+RA+ L+LD +LL LLG V+ +LLDP +I V+ L+R+AP RR Sbjct: 1046 TGAFIYETDSPLAEKRAAALALDPKLLAKLLGSVELRDLLDPDIIADVDARLRRIAPDRR 1105 Query: 935 AKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACM 994 A+ E L D LR LGP+ + DL + + + L +R+ I+G E LA + Sbjct: 1106 ARTGEELIDALRILGPIPIADLPHHMLVDA-----FRIDDLDRQRVMRVRIAGVEHLAQV 1160 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 DA LRD LG+ +P + V L L R+ R + F L ++ Sbjct: 1161 SDAPLLRDGLGIPVPPGVAAP-TALVPDALEQLASRWCRTRGPFLLADMVAAFGLAPSVA 1219 Query: 1055 EEQLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLL 1108 L L + GL++ + +V+ +V + +R RSL AAR T+PV+ + YAR L Sbjct: 1220 HNLLSGLVDTGLIIVGHYRHGVDEPEYVAADVLKLIRSRSLAAARAQTQPVSHSAYARFL 1279 Query: 1109 LERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDY 1168 ++ G+ P S G D + V EQLAGV LPAS WE+ ILP+RV DY Sbjct: 1280 IDWHGISPIKTTGQPRHDSLDVG-----DEIYAVCEQLAGVRLPASAWETLILPSRVHDY 1334 Query: 1169 SSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVA 1228 + L +L G + G G +D V L EYAA+ P E + S ++I Sbjct: 1335 NPADLQQLCHDGDIRIVGAGLAGTNDPWVLLLPAEYAADLV-PVEVEPPTLSPAARSIYD 1393 Query: 1229 VLAD--GGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSS 1286 +++ GG + + ++ D +A + ALW L G+++ D +APL A Sbjct: 1394 MMSGSPGGGFLFDSLVDQVG-------DPAATRAALWELFDCGLVSPDSFAPLAARLAQG 1446 Query: 1287 SNARTSTRRSHRARRGRPVYAQPVSPRVS------------YNTPNLAGRWSLLQVEPLN 1334 A ++R R+R +P P++ GRW L + ++ Sbjct: 1447 KTAHRTSRTPARSRLRAGRPGRPGRQGRMGRIGRGYAGVIHQTPPDMTGRWGLSPIPTVD 1506 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 T R +AL E LDRYG+++R A+ AEN+ GGF + S E+SG+ +RG F+ LG Sbjct: 1507 PTSRSVALGEAWLDRYGVVTRGAIQAENVLGGFALAYKVLSSFEESGKALRGHFITDLGA 1566 Query: 1395 AQFAERLTIDRLRDLAT------QATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVP 1448 AQFA IDRLR A + T ++A DPAN +G LPWP P Sbjct: 1567 AQFATAAVIDRLRGFADTDDVTGWPSGTSEPNVCVIAACDPANPYGAALPWP--GDGKSP 1624 Query: 1449 TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEK-----EELLAPEVFHALTTALRREPRLR 1503 +R AGALVV++ G + +L +GGK + + EE + V AL+ A+ + R Sbjct: 1625 SRAAGALVVLADGLPVAHLTRGGKTLTWFLPPRAEISEETIIRLVVQALSGAVGKNLTTR 1684 Query: 1504 FTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 T+ ++N PV ++P + R AG +P GL G Sbjct: 1685 ITIEKLNGKPVHESPHLEVFRTAGARLTPSGLRIG 1719 Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats. Identities = 98/194 (50%), Positives = 130/194 (67%) Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + + +ILYISP+KALGTDV+ NL+ PL GI R G ++ V +R+ Sbjct: 137 NTQANTQTDAPAGVKILYISPLKALGTDVELNLRAPLTGINHTAARLGIHHPDITVAVRS 196 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDT A ER+ RNPPDILITTPES YL+LTS+A L V T+I+DE+HA+AG+KRG H Sbjct: 197 GDTTAAERAAHIRNPPDILITTPESAYLILTSKAATILSTVTTIIVDEIHAIAGTKRGVH 256 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 LAL+LERL+ L+ QRIGLSATVR +A FLGG PVT+++PPA + + +VVPV Sbjct: 257 LALTLERLEHLVEKPLQRIGLSATVRPHETIARFLGGRHPVTIIDPPATKTWDLSVVVPV 316 Query: 253 ANMDDVSSVASGTG 266 +M D+ + G+ Sbjct: 317 PDMSDLPAPELGST 330 Score = 89.6 bits (221), Expect = 8e-16, Method: Composition-based stats. Identities = 37/85 (43%), Positives = 45/85 (52%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P+P + D FSP WF F PT VQ W + E+ALV+APTGSGKTLAAFL+ Sbjct: 7 PEPEDHILDKFSPHIATWFRDVFAHPTPVQTAAWSAISAGENALVVAPTGSGKTLAAFLW 66 Query: 65 ALDRLFREGGEDTREAHKRKTSRIL 89 AL+ L G+ T L Sbjct: 67 ALNTLATAPGQTRLPVVNPTTKTSL 91 >UniRef50_C6MZM9 DEAD/DEAH box helicase-like protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZM9_9GAMM Length = 1403 Score = 1203 bits (3112), Expect = 0.0, Method: Composition-based stats. Identities = 463/1490 (31%), Positives = 693/1490 (46%), Gaps = 170/1490 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 P + WF PT Q Q W ++ L+ APTGSGKT AAFL +D+L R+ Sbjct: 9 WAHPIVQQWFFEQIGSPTEPQIQGWPQILSGQNTLISAPTGSGKTFAAFLACIDQLVRKA 68 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 T +LYISP+KALG DVQ+NL PL I +++G ++ V +RTG Sbjct: 69 ISGTLANETE----VLYISPLKALGNDVQKNLMGPLNEIVKVAKKQGLAMADINVMVRTG 124 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAH 192 DT +ER + + PP IL+TTPESLY++LT+ ++RE LR V+TVI+DE+HA+A KRGAH Sbjct: 125 DTSPKERQAMLKQPPHILVTTPESLYILLTAGKSREILRTVKTVIVDEIHALADDKRGAH 184 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVT--VVNPPAMRHPQIRIVV 250 LALSLERL+ L RIGLSAT + VA FL G+ +++ +H ++ + V Sbjct: 185 LALSLERLEVLTSFPPLRIGLSATQKPLDVVANFLVGNNRAAPAMIDIGHAKHLELAVEV 244 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P++ + V+S IW I I ++RST++F N+R +AE+ Sbjct: 245 PISELGAVAS--------------NQIWDEIYNRIAQLAEQNRSTLIFANTRRVAERAAH 290 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L E L +HHGS+SK+ R E Sbjct: 291 HLGERLGKDL-------------------------------VVAHHGSLSKKLRLEAETK 319 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+GEL+ +VAT+SLELGID+G+VDLV Q+ +P S+A LQR+GRAGH G +SKG F Sbjct: 320 LKNGELKALVATASLELGIDIGSVDLVCQLGSPRSIAVMLQRVGRAGHWHGAISKGRIFA 379 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 TR +L++ A IV + G L+ L PH P+D+LAQQ VA A + +D+ + VR A Sbjct: 380 TTRDELLECAAIVNAIQDGDLDQLVIPHEPIDILAQQIVATCATEDWLIDDLFLLVRHAF 439 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 +KDL R FDA ++ML+ + L ++R G+L R G++L+A+TSGG+IP Sbjct: 440 HYKDLSREQFDAVINMLAEGIAGSR-GRYGAYLFYDRVHGMLKGRRGSRLVAITSGGSIP 498 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI--TRDQVIVT 608 D G+++V A S VG LDE+ ES D+I LG+TSW+I +I T+ QVIV Sbjct: 499 DNGLFTVKTE-----APSIVVGTLDEDFAVESNRGDVILLGSTSWKINRIESTKGQVIVE 553 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT----IPPWL-----AEE 659 A G +PFW GE R AEL + + LL+ + + WL + Sbjct: 554 DAHGAPPSVPFWLGEAPERTAELSLRVSNLRELLSSKLTAAEESIANVQQWLGAYCKVDV 613 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 N I + + R G VP ++ ER DE G ++++HSP+G R+++ W +A+ Sbjct: 614 NGARQIIDYLLQGRALLGAVPTQERIIAERFFDESGGMQLVIHSPFGARINKAWGLALRK 673 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + + A+D+GI + + +IV AV S LF R Sbjct: 674 CFCRSFNVELQASATDNGINIALTEQHSFPLADVFNYLSAVTAKEIVVHAVLQSPLFPTR 733 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFPVI 824 +R A RAL + GH+ P R+RA LL PD P+I Sbjct: 734 WRWAACRALALVRFRNGHKVPPNILRMRAEDLLAAVFPDAVACQDNVNIDDVKLPDHPLI 793 Query: 825 LETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDA 884 E ++ L + ++ L L++++ EIQ V T TPS FA LL F+ DA Sbjct: 794 NEAMKNALMEALNVEGLLVLLKKIKNKEIQCIAVDTPTPSVFAHELLNANPYAFL--DDA 851 Query: 885 PLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDL 944 PL ERRA + + L N++ ++ LDP+VI++V ++ + + L DL Sbjct: 852 PLEERRARAVEMRRTLPANMVAELGN---LDPEVIKEVRQQAW-----PDVRNADELQDL 903 Query: 945 LRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDAL 1004 L+ + A + SS YL+ L+A R A + Q ++ A Sbjct: 904 LQTVLAFPA--HAATYHESSRRWQVYLDELVAAGRAGTATLGNQLFWFAVEKAKTF---S 958 Query: 1005 GVRLPESLPEIYLHRVSYPLRD------LFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL 1058 + L + L + PL L +L T L+ LG + +E L Sbjct: 959 AIYPEAQLNQSLLDVEAIPLDRDEGIVYLLRGWLFHLGPTTVLALSQFLVLGESEIEHVL 1018 Query: 1059 QQLREQGLVMNL-----QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQG 1113 +L GL++ W + R+ +L R+ PV T + LL Q Sbjct: 1019 LRLEAMGLILRGVFEGNASQEWCERRLLARIHRLTLAKLRQEIEPVTPTQFVHWLLTWQH 1078 Query: 1114 VLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEML 1173 V P T G G++ VIEQL G +PA WE I RV++Y +L Sbjct: 1079 VAPGTQ-------------LSGEQGLLAVIEQLQGFEIPAKAWEPHIFAKRVKNYDPMLL 1125 Query: 1174 DELLATGAVIWSGQ--------------KKLGEDDGLVALHLQEYAAESFTPAEADQ--- 1216 D+L G + W + + L+E ++ + + Sbjct: 1126 DKLCLMGIIGWGRLSSTLTHADTFIDSKRVTPTSIAPITFFLRENSSWLIEVKDGVKEDI 1185 Query: 1217 -ANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDI 1275 A S + + + L GA F I +R E ++ LW LV G+ ++D+ Sbjct: 1186 LAGLSHIAKDVYLYLLKNGASFFMDIVDGVRHLKSE------VEMGLWELVAVGLTSADL 1239 Query: 1276 WAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLN- 1334 + LR+L RR R + +GRW LL+ + Sbjct: 1240 FDNLRSLIDPRRRLMKKRRRVVRHQYS-------------------SGRWFLLKKSLHSF 1280 Query: 1335 DTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGG 1394 ++E++ AL +L RYG++ R ++ E + + R++E+ G I GRFVEG G Sbjct: 1281 NSEQIEALCWVLLKRYGVVFRDLLVREKNIPRWRELHAAFRTLEERGEIRGGRFVEGFLG 1340 Query: 1395 AQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPA 1444 QFA ++ LR + + ++++A DP NV G +LP P A Sbjct: 1341 EQFALPYAVESLRAMKHKEIGDEQ---ISIAAVDPLNVSGFILPGPRVSA 1387 >UniRef50_Q13M86 ATP-dependent helicase, DEAD/DEAH family n=5 Tax=Burkholderia RepID=Q13M86_BURXL Length = 1510 Score = 1199 bits (3102), Expect = 0.0, Method: Composition-based stats. Identities = 460/1574 (29%), Positives = 680/1574 (43%), Gaps = 199/1574 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F PA WFL+ F PT Q W R LV APTGSGKTL AFL ALD L ++ Sbjct: 47 DDFHPAVASWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQ 106 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++Y+SP+KAL D++ NLQ+PL+GIA E RG +++R +RT Sbjct: 107 GLAAG--GALPDETLVVYVSPLKALSNDIRLNLQLPLQGIAAELEARGLPALDIRTAVRT 164 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT QER+ L + P IL+TTPESLY++L S R L V TVI+DE+HA+AGSKRG+ Sbjct: 165 GDTTQQERNALKKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGSKRGS 224 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--------DRPVTVVNPPAMRH 243 HLALSLERLDAL RIGLSAT + S VA FL G +V+ +R Sbjct: 225 HLALSLERLDALCQRRLPRIGLSATQKPVSAVARFLVGGASIDSGIPADCAIVDVGHVRE 284 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 + + +P ++ V +W + + + V HR+T++F N+R Sbjct: 285 RDLALEIPPVPLEAV--------------MPNEVWERVYDRLAELVAMHRTTLIFVNTRR 330 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 +AE+ L E +HHGS+++E Sbjct: 331 MAERAARHLTERLGKEA-------------------------------VAAHHGSLAREH 359 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R EQ LK GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GH VGG+ Sbjct: 360 RFDAEQRLKRGELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHHVGGM 419 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 KG FP +R DL++ A +++C+ G L+ L P PLDVLAQQ VA + D + Sbjct: 420 PKGRLFPASRDDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWSEDALF 479 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 +RRAAP+ DL R +DA L ML Y S + L + +G L R G +L+AV Sbjct: 480 DMMRRAAPYADLTREQYDAVLRMLVEGYTSRNGPR-GAYLHRDVLSGTLRGRRGGKLVAV 538 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 TSGGTIP+ Y+V+L +G ++E+ ES D+ LG S+RI +I Sbjct: 539 TSGGTIPENADYAVVLEPQAIN-----IGTVNEDFAVESLAGDVFQLGNASYRILRIESG 593 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD------------------- 644 +V V A G+ +PFW GE GR EL + + Sbjct: 594 RVRVEDAQGQPPNIPFWLGEAPGRSDELSFGVARLREQIGRLLDGKDPAMPATVANATGT 653 Query: 645 --------------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERC 690 +E I + R A ++P LV+ER Sbjct: 654 EVQAEEITTLPVRLDHATQWLTDNLGLDEAAARQIVDYLARARAALSVLPTQNTLVMERF 713 Query: 691 RDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLP 750 DE G ++++H+P+G RV+ W +A+ R + + A++D IV + + + Sbjct: 714 FDESGGTQLVIHAPFGSRVNRAWGLALRKRFCRTFNFELQAAATEDAIVLSLTGSHSFVL 773 Query: 751 DAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQ 810 D ++ +A+ + LF R+R A AL +P T G +T QR+R+ Sbjct: 774 DEVWRYLHSNSAEHLLIQALLDAPLFGVRWRWNATTALGLPRYTGGRKTAPQLQRMRSED 833 Query: 811 LLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 LL + P P++ +T+ +CL + D L+RR+ GE+Q+ Sbjct: 834 LLASVFPEQAACLENVVGERELPHHPLVDQTVDDCLHEAMDSERWLALLRRIEQGEVQLV 893 Query: 857 DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDP 916 PSP A +L + Y DAP+ ERR + + D LD Sbjct: 894 ARDLPAPSPLAAEIL--NAKPYAYLDDAPIEERRTQAVLNRRWTDPS---SADDLGALDA 948 Query: 917 QVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLA 976 I V ++ +A+ + + + L L +T + E ++L +L Sbjct: 949 GAIESVRDDAW-----PQARNADEMHEALTGLACITDTEARHH-----EGWPAWLASLAE 998 Query: 977 VKRIFPAMIS-GQERLACMDDAARLRDALGVR---LPESLPEIYLHR--VSYPLRDLFLR 1030 R I+ ++ P + P+ Y L D+ Sbjct: 999 SGRATRLQIADDAGVWLPIERLTCFESLYPEARFSPPLAAPKGYTDSWNADDALLDVLRA 1058 Query: 1031 YLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL------QQDIWVSDEVFRRL 1084 L + A +A L A VE+ L +L +G VM ++ W + R+ Sbjct: 1059 RLTGFGPLPASAIAAALKLPAASVEQSLMRLEAEGYVMRGRFTPQAAEEEWCERHLLARI 1118 Query: 1085 RLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIE 1144 +++ R PV + R L E Q + P T EG D + V+E Sbjct: 1119 HRYTVKRLRREIEPVERHDFMRFLFEWQHLTPDT-------------RSEGRDALAAVLE 1165 Query: 1145 QLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS-------GQKKLGEDDGLV 1197 QL G A WE ILPARV+ Y++ LDEL G ++W+ G +V Sbjct: 1166 QLEGFQAAAGAWEEDILPARVKAYANTSLDELCRAGKIVWTRLTERARGTAGPVRSTPIV 1225 Query: 1198 ALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSA 1257 L S + Q SA Q++ VLA GA F ++ +R V Sbjct: 1226 LLPRARVRVWSALLDPSKQPELSARAQSVYDVLAQHGAMFFDELLTEVR------VLRME 1279 Query: 1258 LQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYN 1317 L+ AL LV G++ SD +A LRAL + + R ++ Sbjct: 1280 LESALGELVAAGLVNSDSFAGLRALLKPVAK------------RNAFSGSRRARSSALIG 1327 Query: 1318 TPNLAGRWSLLQVEPLNDTERM------------LALAENMLDRYGIISRQAVIAE-NIP 1364 + AGRW+L+ E +A +L RYG++ + + E + Sbjct: 1328 GMDDAGRWALVSRPATAAAEVAPERRRQLPPDVLEHVAMTLLRRYGVVFWRLLEREADWL 1387 Query: 1365 GGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVAL 1424 + + + + +E G I GRFV GL G QFA I LR++ A V + Sbjct: 1388 PPWRDLLRVFQRLEARGVIRGGRFVNGLAGEQFALPEAIPVLREVRRHANDGA---FVCV 1444 Query: 1425 SANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELL 1484 + DP N+ G LL PA AG ++ G ++ L G + E + Sbjct: 1445 AGTDPLNLAGTLLVGERVPA------VAGNRILYRDGIVVATLVAG---TFWFGPALEAV 1495 Query: 1485 APEVFHALTTALRR 1498 A RR Sbjct: 1496 PSAREQARAWLARR 1509 >UniRef50_A6CAB6 DEAD/DEAH box helicase-like protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAB6_9PLAN Length = 1532 Score = 1192 bits (3085), Expect = 0.0, Method: Composition-based stats. Identities = 449/1607 (27%), Positives = 695/1607 (43%), Gaps = 216/1607 (13%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 + P WF + F+ PT Q Q W R EH L+ APTGSGKTL AFL +DRL + Sbjct: 6 YHPIIEKWFRKRFQGPTEPQQQGWPCINRGEHTLISAPTGSGKTLTAFLSVIDRLVKR-- 63 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP++AL D+ RNL+ PL+ I+ GE +R+G+RTGD Sbjct: 64 --SLAGDLDDETSVIYVSPLRALSNDMHRNLEQPLEEISQLLEEAGEIFTPIRIGLRTGD 121 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP+ +R+ L + PP IL+TTPESLYLMLT S+ARETL+ VETVI+DE+HA+ KRG+H Sbjct: 122 TPSSKRAALVKRPPHILVTTPESLYLMLTGSKARETLKTVETVIVDEIHALLRDKRGSHW 181 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP-VTVVNPPAMRH-----PQIR 247 +++LERL+AL+ QRIGLSAT + VA +L G RP + + P + Q Sbjct: 182 SITLERLEALVEHPLQRIGLSATQKPLDRVAQYLVGHRPEIEITANPPSKEQSEFPEQTC 241 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 +V + + + + A W + I++ + HRST++F N+R LAE+ Sbjct: 242 RIVNIGHSRTLDVAIQVPPSELSAICSHEQWAEVLEQIIELINSHRSTLIFVNTRRLAER 301 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 +T +L E + SHHGS+S + R T Sbjct: 302 ITHQLTERLGEEV-------------------------------VGSHHGSLSAKIRHRT 330 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 EQ LKSGEL+ V+AT+SLELGID+G +DLV+Q+ +P +A+ LQRIGR+GH +G V KG Sbjct: 331 EQKLKSGELKAVIATASLELGIDVGYIDLVVQIGSPRGIATFLQRIGRSGHSLGLVPKGR 390 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F +R +LV+S +V + G L+ + P P+D+LAQQ A A DE + + Sbjct: 391 IFALSRDELVESMALVRSIKQGILDTVRMPEAPIDILAQQITAEVACQEWNTDELFDTLT 450 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 RA +++L R+ FD+T+ LS S R L ++ + +R A+L++ +GG Sbjct: 451 RAYSYRNLKRKDFDSTIQFLSEGISSTS-GRSRVYLHHDQVQNRVRSRKNARLVSTMNGG 509 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 IP+ Y V+ E + VG +DEE ES DI LG TSW+++ + V V Sbjct: 510 AIPEIASYRVVTEEDQT-----VVGSVDEEFAVESMAGDIFLLGNTSWQVRYVRGGDVTV 564 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA-----EENTI 662 A G +PFW GE GR EL I L + WL+ +E Sbjct: 565 VDAHGAPPSIPFWFGEAPGRSLELSTEISHLRKELERRIEDTERAILWLSQETNTDEWGS 624 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 I + Q+ A G+VP + +V ER DE G ++++H+P+G ++ W + R Sbjct: 625 KQIVEYFQAQKAALGVVPTQKRIVFERFFDESGGMQLVIHAPFGGDINRAWGYTMRKRFC 684 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 + + A D+GI+ + ++ + + Q+ +A+ +F R+R Sbjct: 685 RSYNFELQATADDNGIILSLGPQHSFPLESLFSMLNTRNVQQLSEQAILDHPMFHVRWRW 744 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILETL 828 RALL+ G + P QR RA LL PD ++ +TL Sbjct: 745 NVTRALLVSRMQNGKKVPPPLQRFRAEDLLTAVFPRLTGCPENEIGEIVRPDHILVDQTL 804 Query: 829 RECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE 888 +CL + D+ L+ ++ ++ G +++ T PSPF LL F+ +A E Sbjct: 805 YDCLNEQLDIEGLKNVLLKIEQGSVKLIPRDTREPSPFCYELLNSSPYTFLDGGEA--QE 862 Query: 889 RRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLREL 948 RRA ++ L V+ L P+ I QV +E Q + + + D+L Sbjct: 863 RRARAVATRHTLSVE---SVEDLGRLSPEAIAQVCQEAQPV-----VRNADEFHDVLLGR 914 Query: 949 GPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPA-------------MISGQERL-ACM 994 + V + E + + + L A R ERL A + Sbjct: 915 IHLPVNE--------RPEWSDWYQELEATGRATTLSRTVSGPDQKTAHSWVATERLPAAL 966 Query: 995 DDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIV 1054 + A V +P + + + + + L T +LA++ + A Sbjct: 967 AAFPESQHAPHVNVPAGVQQDW--ESTEARTSIIRGLLDNCGPQTVAELANQAGMTDAQT 1024 Query: 1055 EEQLQQLREQGLVMNL----------------------------QQDIWVSDEVFRRLRL 1086 E L L +G+ M W + R+ Sbjct: 1025 EAALMALEGEGIAMQGYFRIKDPNWDQSLDESGTTESKKEASPAPPKEWCHRRLLSRIHR 1084 Query: 1087 RSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQL 1146 +LQ R +PV + + L G+ G +G+ V+ L Sbjct: 1085 LTLQGLRAQVQPVDVSVLIQYLTRLHGLTED-------------EKRSGTNGLFEVLSML 1131 Query: 1147 AGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGE------------DD 1194 G+ +PA WE ILPAR+ +Y S LDEL TG V W + Sbjct: 1132 QGIDIPAICWERDILPARLSNYQSSHLDELCFTGEVGWGRLYPPRRTADQGKAMTSITRN 1191 Query: 1195 GLVALHLQEYAAESF--------TPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIR 1246 V+ L+E + + S+ Q + +L GA FA + + Sbjct: 1192 APVSFFLREDIPWLACFNQVSSNLEDSEAEHHLSSPAQEVQELLTQRGALFASDLMATTQ 1251 Query: 1247 DKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVY 1306 S + ++L L+ +G++TSD ++ +R T + + R R R Sbjct: 1252 S------LPSQIADSLGELISRGLVTSDSFSGMRQFTEDRISKNRRSSRKSRIGLVRKR- 1304 Query: 1307 AQPVSPRVSYNTPNLAGRWSL--------LQVEPLNDTERMLALAENMLDRYGIISRQAV 1358 +TPN GRWS+ ++ L E + A ++ R+G++ R + Sbjct: 1305 ----------STPNNTGRWSIWRRESSEEVEERSLQYFEYVEQWAWQLIRRWGVVFRDLL 1354 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 E+ + + + R +E G I GRFV G+ G QFA TI LR L + Sbjct: 1355 SKESGAPRWFELLQIYRRLEARGEIRGGRFVTGVAGEQFAMSGTIQELRKLRDAPS---S 1411 Query: 1419 YTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 LSA DP N+ G L PAT + G L+ W Sbjct: 1412 DELTILSATDPLNLTGILTKDARVPAT------PTNRIAYRNGNLIA-----------WA 1454 Query: 1479 EKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLRE 1525 + EEL ++ L+RE L F LP+++ L E Sbjct: 1455 KNEELFL---LTKVSEKLKRELILGF------GLPIQEFNRQQTLEE 1492 >UniRef50_Q4K580 Lhr n=14 Tax=Proteobacteria RepID=Q4K580_PSEF5 Length = 1474 Score = 1187 bits (3072), Expect = 0.0, Method: Composition-based stats. Identities = 456/1532 (29%), Positives = 686/1532 (44%), Gaps = 162/1532 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F PA WF F T Q + W + A+ L+ APTGSGKTL AFL +D L R+ Sbjct: 58 DGFHPAVSAWFKHTFAAVTPAQARAWPLIAQRRSTLIAAPTGSGKTLTAFLAVIDDLVRQ 117 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++Y+SP+KAL D+Q NLQ PL GI ++ RR G E+++ +RT Sbjct: 118 GLAGG--GQLPDATLVVYVSPLKALSNDIQINLQQPLAGITEQLRRMGLPELSISTAVRT 175 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP ++R+ + ++ P IL+TTPESLY++L S R L +VIIDE+HA+AGSKRG+ Sbjct: 176 GDTPQKDRNAMRKSAPQILVTTPESLYVLLGSDSGRRMLASTRSVIIDEIHALAGSKRGS 235 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVV 250 HLALSLERL AL RIGLSAT + V+ FL G RP +V+ R + I V Sbjct: 236 HLALSLERLQALCAAPLLRIGLSATQKPIEAVSRFLVGHGRPCEIVDIGHARPRDLDIEV 295 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + V +W + + + HR+T++F N+R L Sbjct: 296 PPVPLSAV--------------MANDVWELVYERLANLAREHRTTLIFVNTRR----LAE 337 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 RL + RL + +HHGS++KEQR EQ Sbjct: 338 RLARHLSERLGKQA---------------------------VAAHHGSLAKEQRLEAEQR 370 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+G+L+ ++AT+SLELGID+G VDLV Q+ +P S+++ LQR+GR+GHQVGG KG F Sbjct: 371 LKAGDLQVLIATASLELGIDIGDVDLVCQIGSPRSISAFLQRVGRSGHQVGGTPKGRLFA 430 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 TR DL++ A +++C+ G L+ L PH PLDVLAQQ VA + +R+AA Sbjct: 431 LTRDDLIECAALLDCVRRGELDTLLIPHAPLDVLAQQIVAEVSCQEWSEAALLDMLRQAA 490 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+ DL + + A L ML+ + +G L + L R GAQL A+TSGGTIP Sbjct: 491 PYADLDQAHYQALLQMLAEGF-NGRQGLRSAYLHRDALARTLRGRRGAQLTALTSGGTIP 549 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 D YSVLL +G ++E+ ES D+ LG TS+RI ++ +V V A Sbjct: 550 DNADYSVLLEPQ-----GLNIGSVNEDFAVESIAGDVFQLGNTSYRILRVETGKVRVEDA 604 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD---------GAFFSGTIPPWLAEENT 661 G+ +PFW GE GR AEL + L L + A + Sbjct: 605 QGQPPNIPFWLGEAPGRSAELSSAVARLLAQLDELLGATPGQLQAAIHWLHHELGLNLAS 664 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + + R A G +P L++ER DE G ++++HSP+G R++ W +A+ R Sbjct: 665 AEQLVDYLAPARLALGALPSQDTLIMERFFDESGGTQLVIHSPFGSRINRAWGLALRKRF 724 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + + AS+D IV + + D I+ +A+ + LF R+R Sbjct: 725 CRTFNFELQAAASEDAIVLSLSTSHSFALDEVWRYLHSNSAEHILVQALLDAPLFGVRWR 784 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILET 827 A AL +P + G + P QR+++ L+ + PD P++ +T Sbjct: 785 WNAGVALALPRYSGGRKVPPQIQRMKSEDLIASVFPDQIACLENLAGEREIPDHPLVEQT 844 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 L +CL + D L+RR+ G++++ PSP A +L F+ DAPL Sbjct: 845 LDDCLHEAMDSEGWLNLLRRMEQGQVRLLSRELPAPSPLAAEILSAKPYTFL--DDAPLE 902 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 ERR + DP D + + + + L Sbjct: 903 ERRTQAVLARRW--------SDPQATDDLGALDAEAIAAVAAEAWPAPASADEMHEALMS 954 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMIS-GQERLACMDDAARLRDALG- 1005 L ++ + +L+ L + R G ++ LR Sbjct: 955 LACISEAEAQANLH-----WPEWLQALSSQGRACRLQAGPGGGLWLALERICCLRALYPQ 1009 Query: 1006 VRLPESLPEI----YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQL 1061 L +L + L +L L A +T Q+A L + + + L QL Sbjct: 1010 AALQPALQPVPGFDQAWEAQPALVELIRARLSGFAPLTLAQIAAPLGLPASSIHQALIQL 1069 Query: 1062 REQGLVMN------LQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVL 1115 +G V+ ++ W + R+ +++ R PVA + R L + Q + Sbjct: 1070 ESEGYVLRGRFSPGGDEEQWCERHLLARIHRYTVKRLRREIEPVALQDFMRFLFDWQHLS 1129 Query: 1116 PATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDE 1175 P T G +G + ++ Q G AS W+S +LPAR++DYS+ LD+ Sbjct: 1130 PGTQG-------------QGSAMLAELVAQFEGYPAAASAWDSDLLPARLKDYSASWLDD 1176 Query: 1176 LLATGAVIWSGQKKLG-------EDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVA 1228 L +G V+WS G +V L A + D ++ S Q + A Sbjct: 1177 LCRSGKVVWSRINSSGKIAASALRSTPIVLLPRARVALWNALTCPIDSSDLSPKAQKVHA 1236 Query: 1229 VLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSN 1288 VL+ GA F ++ Q + S L+ L LV G + +D +A LRAL + Sbjct: 1237 VLSQLGALFFDELLQEA------HLLRSELETVLQELVGAGWVNADSFAGLRALITPA-- 1288 Query: 1289 ARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL-QVEPLNDTERMLALAENML 1347 S R++ +RRGR + + AGRW+LL + + + +A +L Sbjct: 1289 ---SKRQNRSSRRGRGAFV---------GGMDDAGRWALLRRAASEDSAATLEHVAMTLL 1336 Query: 1348 DRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL 1406 RYG++ + + E + + + +E G I GRFV GL G QFA I L Sbjct: 1337 RRYGVVFWRLLEREADWLPNWRDLLRTFHRLEARGEIRGGRFVSGLAGEQFALPEAIPLL 1396 Query: 1407 RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLY 1466 R++ + + +A+ DP N+ G LLP P PA +G +V G Sbjct: 1397 REVRRRP---HDGSLIAVCGVDPLNLAGTLLPGPKVPAL------SGNRLVFRDGLPAA- 1446 Query: 1467 LAQGGKKMLVWQEKEELLAPEVFHALTTALRR 1498 A G +W E L P+ AL L R Sbjct: 1447 -ADIGGTQHLWLE----LEPQAAQALRNKLIR 1473 >UniRef50_Q1IK30 DEAD/DEAH box helicase-like n=3 Tax=Bacteria RepID=Q1IK30_ACIBL Length = 1435 Score = 1185 bits (3067), Expect = 0.0, Method: Composition-based stats. Identities = 456/1543 (29%), Positives = 685/1543 (44%), Gaps = 190/1543 (12%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 N P SL P ++WF++ F PT Q W L+ APTGSGKTLAAF Sbjct: 2 GNAVPESL--QWAHPLVQEWFVQKFGTPTEPQVAGWPQILAGRTTLIAAPTGSGKTLAAF 59 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L +D+L R+ R + ++YISP+KALG D+Q+NL++PL I RG Sbjct: 60 LACIDQLVRKALN----GELRDCTEVVYISPLKALGNDIQKNLEVPLGEIMQMAGERGIL 115 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEV 181 +R +RTGDT A ER K+ R PP IL+TTPESLY++LT R+R+ LR V TVI+DE+ Sbjct: 116 LPQIRTAVRTGDTLASERIKMLRLPPHILVTTPESLYILLTADRSRQNLRHVRTVIVDEI 175 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPP 239 HAVA KRGAHL +SLERLD L T RIGLSAT + +A FL G +V+ Sbjct: 176 HAVADDKRGAHLTISLERLDKLAITPPTRIGLSATQKPIEQIAHFLTGSGRPDPAIVDVG 235 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 R I I VP + V+S +W I + D V +HRSTI+F Sbjct: 236 HRRQLDIAIEVPNTELGPVAS--------------NEMWDEIYQRLADLVNQHRSTIIFV 281 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R L+E+L L E+ +HHGS+ Sbjct: 282 NTRRLSERLCLHLAEILGEEN-------------------------------VAAHHGSL 310 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 S++ R E LK+GE++ +VAT+SLELGID+G VDLV Q+++P S+A LQRIGRAGH Sbjct: 311 SRKLRHAAETKLKNGEVKALVATASLELGIDVGFVDLVCQISSPRSIAVALQRIGRAGHW 370 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 G + KG F TR +LV+ A + + G L+ + P PLD+LAQQ VAA + + Sbjct: 371 RGAIPKGRIFATTRDELVECAAGIRAIHQGDLDRIIIPEAPLDILAQQIVAACSAEECDE 430 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 DE + VRRA P++DL R+ ++ L MLS + + + +R L AR GA+ Sbjct: 431 DEMFDLVRRAYPYRDLDRKQYEEILAMLSEGIAAKR-GRYGAYIHHDRVNRKLRARRGAR 489 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 L A+TSGG IP+ +++V+L VG +DE+ ES +I LG TSW+I++ Sbjct: 490 LAAITSGGAIPETALFTVVLEPE-----GVVVGTVDEDFAVESMAGEIFLLGNTSWKIRR 544 Query: 600 ITR--DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD------------- 644 I +++V A G+ +PFWRGE R AEL + + + L+++ Sbjct: 545 IEGNVGRILVEDAHGQPPGVPFWRGEAPARTAELSQHVSELRRLVSEMTPTTKPLHKEEV 604 Query: 645 ----------------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLE 688 ++ I I R G VP + ++ E Sbjct: 605 AGESRRIRGITPTAEVTQAIEWLQRECGVCQSGAEQIIEHIVTGRAVLGDVPTQQTIIAE 664 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 R DE G ++I+H+P+G R+++ W +A+ R + + A+DDG+ + + Sbjct: 665 RFFDEGGGMQLIIHAPFGGRINKAWGLALRKRFCRSFNFELQAAATDDGLNIALAEQHSF 724 Query: 749 LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRA 808 +PE L +I+ +A +S +F R+R A R+L + G + P QR+R+ Sbjct: 725 PLSDVFQFLQPETLPEILEQAALASPIFKTRWRWDANRSLALLRFQNGKKVPPQIQRIRS 784 Query: 809 SQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQ 854 LL PD P+I E +++ L + DL L +L+ L G ++ Sbjct: 785 DDLLASVFPDVAACFENIEGDIKVPDHPLIKEVMKDTLHEAMDLDGLMQLVSNLRDGTVK 844 Query: 855 ISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELL 914 V T PS F+ +L F+ DAPL ERRA +S+ L ++L +V L Sbjct: 845 TLAVDTPVPSVFSHEILNANPYAFL--DDAPLEERRARAVSMRRVLPDSVLEEV---GRL 899 Query: 915 DPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENL 974 D I+QV EE + + + L D+L L + E + + + E L Sbjct: 900 DRAAIQQVCEEAR-----PDVRDADELHDMLHTL-VVVPEFIDLPGWRQNAAWQQFFERL 953 Query: 975 LAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHR---VSYPLRDLFLRY 1031 R F A + A +S V + + Sbjct: 954 RESNRAFVAEADSARYWVAAERARLFAKIFPTASWDSAVPTLDESDINVDDAVLAAATGW 1013 Query: 1032 LRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL------QQDIWVSDEVFRRLR 1085 + VT L +E+ +L G ++ + W + R+ Sbjct: 1014 MMHAGPVTTSTLGTTLGAPQPEIEKAFLRLEASGTILRGKFTGDSTETEWCERRLLARIH 1073 Query: 1086 LRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQ 1145 ++ R+A PV+ + R LL Q V T G G++ V++Q Sbjct: 1074 RLTVATLRKAIEPVSQAQFMRWLLRWQHVAEGTQTF-------------GERGLLEVVQQ 1120 Query: 1146 LAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK---------------L 1190 L G +PAS WE ++L RVR Y + LD L TGAV W + Sbjct: 1121 LQGFEIPASSWEREVLSRRVRQYDPQWLDALSLTGAVGWGRLSPHPATLEDSSQGTRRIV 1180 Query: 1191 GEDDGLVALHLQEYAAESFTPAEADQAN--RSALQQAIVAVLADGGAWFAQQISQRIRDK 1248 + ++E A E +Q S + + + +L GA F I + + Sbjct: 1181 PTSVAPITFFVREDADWMVPRREEEQLERVLSPIGKQVFDLLRKRGACFFADIVRSVGCA 1240 Query: 1249 IGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQ 1308 E+ + LW LV G++T+D + LR+L + +RS R R Sbjct: 1241 KAEA------ETGLWELVAAGLVTADGFDNLRSLIDPKRRSGPGGQRSARPR-------- 1286 Query: 1309 PVSPRVSYNTPNLAGRWSLL-QVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGF 1367 + +GRW +L ++ + + + A+ +L RYG++ R + E+ + Sbjct: 1287 -----------HTSGRWCVLHPLDSVAPEKSVEAVCRMLLRRYGVVFRDLLTRESNLPRW 1335 Query: 1368 PSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSAN 1427 +Q R +ED G I GRFV G G QFA ++ LR L V +SA Sbjct: 1336 RELQIAFRRLEDRGEIRGGRFVAGFLGEQFALPQAVESLRALRNLPANG---ETVTVSAA 1392 Query: 1428 DPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQG 1470 DP N+ G ++P PA + V G L + Sbjct: 1393 DPLNLVGIIVPGERIPAIGYRS------VTYRDGVPLAEEHRQ 1429 >UniRef50_Q3BSA5 ATP-dependent DNA helicase Lhr n=12 Tax=Bacteria RepID=Q3BSA5_XANC5 Length = 1464 Score = 1167 bits (3019), Expect = 0.0, Method: Composition-based stats. Identities = 461/1574 (29%), Positives = 686/1574 (43%), Gaps = 182/1574 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF + F PT Q W H LV APTGSGKTL AF A+D L R+G Sbjct: 8 FHPVVAAWFAQTFAAPTPAQVAAWPAIQAGRHTLVAAPTGSGKTLTAFFAAIDALIRDGL 67 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +R++Y+SP+KAL D+ NL PL+GI G +V +R +RTGD Sbjct: 68 ANG--GALPDETRVVYVSPLKALSNDIHLNLDAPLQGIRAALVAGGLPDVPIRTAVRTGD 125 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP +ER++ R PP IL+TTPESLY++L S R +L+ V TVI+DE+HAVA KRG+HL Sbjct: 126 TPQRERAQARRTPPHILVTTPESLYVLLGSASGRASLQHVRTVIVDEIHAVASDKRGSHL 185 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL------GGDRPVTVVNPPAMRHPQIR 247 +L+LERL L+ R+GLSAT + VA FL G P +V+ R + Sbjct: 186 SLTLERLQRLVAQPITRVGLSATQKPIETVAQFLVGVDADGVPPPCEIVDIGYTRKRDLA 245 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +P + V S W + + +HR+T+VF N+R +AE+ Sbjct: 246 LALPPTPLSVVMS--------------NDQWLQVYADVAALAQQHRTTLVFVNTRRMAER 291 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L +L + +HHGS+S+E R + Sbjct: 292 AARHLGDLLGKQR-------------------------------VSAHHGSLSRETRLLA 320 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 Q LK+G+L +VAT+SLELG+D+G VDLV Q+ +P S+A+ LQR GR+GH+VGG K Sbjct: 321 VQRLKAGDLTVLVATASLELGLDIGDVDLVCQLGSPRSIATFLQRAGRSGHKVGGTPKAR 380 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 FP+TR +LV+ A +++ + G L+ L P+DVLAQQ VA AA + D ++ VR Sbjct: 381 LFPQTRDELVECAALLDSIRRGELDALRIVTAPVDVLAQQIVAEAACEDWDEDALFALVR 440 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 RA P+ L R FD+ + ML + S L + L AR GA++ A+TSGG Sbjct: 441 RAWPFAGLSRATFDSVVRMLCDGF-STRLGPRAGYLHRDAVHRRLHARRGARMTALTSGG 499 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIP+ G YSV+L EK +G ++E+ ES D+ LG S+RI ++ +V V Sbjct: 500 TIPETGDYSVVLEPQAEK-----IGTVNEDFAVESLTGDVFQLGNASYRILRVEAGRVRV 554 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG-------AFFSGTIPPWLAEEN 660 A G +PFW GE GR EL + +A + Sbjct: 555 EDAKGAPPNIPFWLGEAPGRSDELSAAVSRLRGEIAARLDTAPHQSARDWLQRELEMSAE 614 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + + A G +P + LV+ER D G ++++HSPYG R++ W +A+ R Sbjct: 615 AARQLVDYLANACTALGAMPTQQCLVMERFFDASGGTQLVIHSPYGSRINRAWGLALRKR 674 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + + A++D IV + + + ++ +A+ + LF R+ Sbjct: 675 FCRTFNFELQAAATEDAIVLSLSTSHSFALEEVGRYLHSSSAEHVLIQALLDAPLFGVRW 734 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILE 826 R A A+ +P + G++ QR+++ LL + PD P++ + Sbjct: 735 RWNATNAMALPRFSGGNKVAPQLQRMKSEDLLATVFPDQVACAENLVGEREVPDHPLVAQ 794 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 TL +CL D +++R L G + + PSP A L F+ DAPL Sbjct: 795 TLEDCLHHAMDSDGWLQVLRGLESGAVTLVARDLAAPSPLAAEALNARPYAFL--DDAPL 852 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 ERR + + D LDPQ I V EE + + E + + L Sbjct: 853 EERRTQAVQSRRYTPQ----TSDDLGQLDPQAIAAVCEEAW-----PQPRDAEEMHEALV 903 Query: 947 ELGPMTVEDLAQRHTGSSEEVASYLENLLA-VKRIFPAMISGQERLACMDDAARLRDALG 1005 LG + V + + + PA+ ER+ R A Sbjct: 904 GLGVLPVAEATDAQWQAWLAALAAAGRASCIALHGSPALWVSAERIDWF--LPLYRQAT- 960 Query: 1006 VRLPESLPE---IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLR 1062 V+ P P + + + +R+L L A L+H + A + L L+ Sbjct: 961 VQPPLQAPADCRVADWQRDWAVRELLRGRLSAVGPAQVPALSHALQVPEAEIALALAALQ 1020 Query: 1063 EQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLP 1116 +G VM Q + W + R+ +L R PV+ YAR L E Q V Sbjct: 1021 REGYVMAGQFNAHVQGEEWCERHLLARIHRYTLGRLRREIEPVSQRDYARFLFEWQHV-- 1078 Query: 1117 ATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDEL 1176 S G D + V+ QL G PA LWES++LPAR+RDY LDEL Sbjct: 1079 -----------DSSSRVAGPDALAGVVGQLEGFEAPAVLWESELLPARIRDYQPAWLDEL 1127 Query: 1177 LATGAVIWSGQKKLGEDDG-------LVALHLQEYAAESFTPAEADQANRSALQQAIVAV 1229 G +W+ + G G +V L +E S +AD A S+ Q ++ V Sbjct: 1128 CTAGRTLWARLRPGGGRSGAALRSTPIVLLPRREAQHWSALARDADDAPLSSRAQRVMQV 1187 Query: 1230 LADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNA 1289 L GA F +I+ + + L++AL LV +G D +A LRAL +S Sbjct: 1188 LQQQGALFFDEIADAA------HLMNTELEDALSELVMRGRAHCDSYAGLRALLVPASKR 1241 Query: 1290 RTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND--------TERMLA 1341 ++ R R R S AGRW+ ++ P + + Sbjct: 1242 PSALSRQRR--------------RASALGIRDAGRWAPVRALPDLPLAEAAQRHQDTLEH 1287 Query: 1342 LAENMLDRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAER 1400 +A +L RYG++ + + E + + + + +E G I GRF+ GL G QFA Sbjct: 1288 VARTLLRRYGVVCWRLLEREAAWLPPWRELLRMYQRLEARGEIRGGRFIAGLSGEQFALP 1347 Query: 1401 LTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSG 1460 D + L Q + +SA+DP+N+ G+LLP R G V Sbjct: 1348 ---DAIAALRRARAQPLPQQWICVSASDPSNLLGSLLPGERV------ARVPGNRVASLD 1398 Query: 1461 GKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMF 1520 G + A + L + L PE L+R P Q+PM Sbjct: 1399 GLPMAVWAADRFQAL------QELTPEQAEQALRLLQRGPG-----------AAEQSPME 1441 Query: 1521 TLLRE--AGFSSSP 1532 L + AG P Sbjct: 1442 RWLAQSPAGAVPFP 1455 >UniRef50_B3DRA3 Lhr-like helicase n=11 Tax=Bacteria RepID=B3DRA3_BIFLD Length = 1577 Score = 1166 bits (3017), Expect = 0.0, Method: Composition-based stats. Identities = 658/1663 (39%), Positives = 867/1663 (52%), Gaps = 234/1663 (14%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +FS T+ WF AF QPT Q Q W + LVIAPTGSGKTLAAFL A+DRL Sbjct: 7 LFSEPTKMWFEHAFGQPTEAQAQAWPAIHSGRNVLVIAPTGSGKTLAAFLSAIDRLM--- 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 T +R R+LYISP+KAL DV +NL+ PL+GIA + +G + V R+G Sbjct: 64 ---TVPRTRRAGVRVLYISPLKALAADVAKNLEQPLEGIAAQCEAQGLPVPKIAVATRSG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 DT AQER ++ +PPDIL+TTPESLYL+LTS+A L V+TVI+DE+HAVAG+KRGAHL Sbjct: 121 DTTAQERRRIASHPPDILVTTPESLYLLLTSKAGRILGTVDTVIVDEIHAVAGTKRGAHL 180 Query: 194 ALSLERLDALL--------------------------HTSAQRIGLSATVRSASDVAAFL 227 A+SLERL+ L+ QRIGLSATV A FL Sbjct: 181 AVSLERLENLVTESRKRDAIDADADEGGDAAVDAGRGDRHMQRIGLSATVNPPEKAARFL 240 Query: 228 GGDRPVTVVNPPAM---------------------------------------------- 241 GG +PVT+VNP Sbjct: 241 GGGQPVTIVNPGGRPAMDLRMIEPLENMRDLQSVNAKQRVGGVDAERSAPHISGVTPAMQ 300 Query: 242 RHPQIRIVVPVANMD-----------DVSSVASGTGEDSHAGREGSIWPYIETGILDEVL 290 R + R +VPV + D + +S + GSIWP +E ILDE+L Sbjct: 301 RLAERRGIVPVDDRDVSSTSGDDSDASDAFDSSALVGAAGDRTSGSIWPVVERSILDEIL 360 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYAA-RLQRSPSIAVDAAHFESTSGATSN------- 342 HR+T+VF NSRG+AEKLTARLN+LYA R +P D E G +++ Sbjct: 361 AHRTTLVFVNSRGVAEKLTARLNDLYAQTRHGTNPDTVRDLGSPEGREGFSTHYDAVVGS 420 Query: 343 -----RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 D IA +HHGSVSK++R + E+ LK GELRCVVATSSLELGIDMG+VDLV Sbjct: 421 TTMLVGSHEGDDVIAMAHHGSVSKDRRKMIEERLKRGELRCVVATSSLELGIDMGSVDLV 480 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 IQV TPLSV+SGLQR+GRA HQVGGVS LF+P TR+ +V A +E M AG +E L P Sbjct: 481 IQVDTPLSVSSGLQRVGRADHQVGGVSHALFYPLTRQQIVTGAASLEAMIAGDIEPLAVP 540 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 NPLD+LAQQTVAAAAM L D+WY+ VRRAAP+ +LPR +FDA + M+SG Y S +FS Sbjct: 541 RNPLDILAQQTVAAAAMHDLNADDWYATVRRAAPFAELPRDMFDAVIGMMSGEYNSEEFS 600 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 AFRP+LVWNR+ G+++ARPG+Q +AVTSGGTIPDRG+Y+V+LPE + G RRVGELDEE Sbjct: 601 AFRPRLVWNRDNGLISARPGSQKVAVTSGGTIPDRGLYTVVLPEADAGKGQRRVGELDEE 660 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 MVYESRV D+ITLG ++W+IQ+ITRD+V+VTPAPGR+ARLPFW GEG GR I Sbjct: 661 MVYESRVGDVITLGTSTWQIQEITRDRVVVTPAPGRTARLPFWHGEGAGRDYGFSRTIAR 720 Query: 638 FLHLLADGAFFSG---------------------TIPPWLAEENTIANIQGLIEEQRNAT 676 F +A G + + N I N+ L+ EQ+ AT Sbjct: 721 FTREIAAGLDVKRTEGRSAAEGPAVPTFIPTILTRLHHDGLDANAITNLARLLSEQQAAT 780 Query: 677 GIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDD 736 G VP + L++ER RDE G WRI+L SP+GRRVHEPW++AI+ R+ +G D V A+DD Sbjct: 781 GAVPSDQTLIVERTRDEDGGWRIVLLSPFGRRVHEPWSMAISRRLRQRYGFDGQVYAADD 840 Query: 737 GIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPG 796 GIV ++PD DG +P +FLF+PE L V VG S LFAARFRECAAR+L MP PG Sbjct: 841 GIVIQLPDGDGHIPAQDLFLFDPEDLKADVERQVGESVLFAARFRECAARSLFMPRSDPG 900 Query: 797 HRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 R PLWQQRLRA+QLL+ A+ +FP++LET RECLQDVYD+PAL +M L G I + Sbjct: 901 RRVPLWQQRLRAAQLLQSARMAKNFPLLLETARECLQDVYDMPALNEVMTGLQAGTITVK 960 Query: 857 DVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDP 916 DV T +PSPFA ++LFG+V MYQ D P AER A +LSLD +L LLG D ++L+P Sbjct: 961 DVETESPSPFAENILFGFVGVVMYQYDQPQAERSAQLLSLDPHVLERLLGATDMAQVLNP 1020 Query: 917 QVIRQVEEELQRLAPGRRAKGEE---GLFDLLRELGPMTVEDLAQRHTGSSEEVASYLEN 973 VIR+VE+EL ++ + + GP T + L + + L+ Sbjct: 1021 DVIREVEQELGEHTFWNELADDDVTGRVTRYAKTHGPFTADQLIADLHLDATDAVHTLDV 1080 Query: 974 LLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEI--YLHRVSYPLRDLFLRY 1031 L A + + +D SL + + V +FL Sbjct: 1081 LAAKGELLQGHFVDDDEQGQQW---LHKDVFRRIRSRSLAKARKAVKPVESEAFQMFLID 1137 Query: 1032 LRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQA 1091 + V E+ L ++QL ++L +W S R+R Sbjct: 1138 RQGIGPVGGERYEGADGL-----MRVIEQLEG----ISLPTALWESAVFPARVRDY---- 1184 Query: 1092 AREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDG-VMRVIEQLAGVG 1150 LL V + + D + +E G Sbjct: 1185 --------QPALLDELLTSGDVVWVGSKTGGTSAMDPGEVAFYPADSILFSGVE--HGTT 1234 Query: 1151 LPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFT 1210 AS A + + LD +G + Q L A + T Sbjct: 1235 SNASD-------ATMPEAILTALD----SGGAFHARQ-----------LMDAAKRAWNET 1272 Query: 1211 PAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGV 1270 N + I + E AL +W QG Sbjct: 1273 AEPDINPNTGEI----------------------IPQEWSEQQFKDALWSLVW----QGK 1306 Query: 1271 ITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL-- 1328 +T+ +AP+RALT +++ R ST R R R + L G WS + Sbjct: 1307 VTNSSFAPVRALTAGAASPRKSTTSRRRGR--------VAPIRRATTDMTLGGLWSAVIG 1358 Query: 1329 --QVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRG 1386 + E + TER LAL E +LDRYG+I++ + ENIPGG+ ++ + ME+ GR++RG Sbjct: 1359 QAEAEDTDQTERALALVETLLDRYGVIAQPVIDKENIPGGYSALYPVLNRMEEHGRLVRG 1418 Query: 1387 RFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATL 1446 FV G G AQFAER T+D LR ++ R + VALS DPAN+ G+ + WP PA Sbjct: 1419 MFVRGFGAAQFAERDTVDALR----HPSEHRGQSVVALSVLDPANLSGSAIAWPDAPAGA 1474 Query: 1447 -VPTRRAGALVVV-----------SGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTT 1494 P RR GA VV+ L + G + V E+ + L Sbjct: 1475 GKPARRIGATVVLNAQGALLYAAAKAKHLTAFDQSVGHEAAVNDSDEQ--MRKAATELAY 1532 Query: 1495 ALRREPRLRFTLTEVNDLPV-RQTPMFTLLREAGFSSSPQGLD 1536 AL+R T +++N P+ + P +L ++GF+ PQG+ Sbjct: 1533 ALKRNGTGSVTFSDINGEPLNARHPFARILHQSGFTPVPQGMR 1575 >UniRef50_C8W110 DEAD/DEAH box helicase domain protein n=2 Tax=Bacteria RepID=C8W110_DESAS Length = 1502 Score = 1159 bits (2998), Expect = 0.0, Method: Composition-based stats. Identities = 466/1585 (29%), Positives = 721/1585 (45%), Gaps = 159/1585 (10%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P R WF +PT +Q Q W + EH L+ APTGSGKTL AFL+AL +L Sbjct: 8 LFHPLIRKWFAEKVGEPTDIQIQAWPRITKGEHVLITAPTGSGKTLTAFLWALQKLITGD 67 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 R+LY+SP+KAL DVQRNL PL+ + GE ++V R+G Sbjct: 68 WPLG-------RVRVLYVSPLKALNNDVQRNLLQPLQELRAYFAEAGELFPPIQVLTRSG 120 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAH 192 DTP ER ++ R PP+ILITTPESL L+L+S+ R L GVETVI+DE+HAV +KRG H Sbjct: 121 DTPQNERRQMLRKPPEILITTPESLNLLLSSKNNRLILSGVETVILDEIHAVLDNKRGTH 180 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP- 251 L +++RL L QRI LSATVR VA F+GG + + + I+ Sbjct: 181 LITAVDRLVLLAG-EFQRIALSATVRPLEPVAEFVGGFKACRDGEDCRYQKRPLVILRSA 239 Query: 252 -VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 + + + + + ++W + + + + +T+VF N+R EKL+ Sbjct: 240 AKKHYNLIVDAIERNNGGAEEVEQDALWQALAAVLTKVIKENIATLVFCNNRRAVEKLSR 299 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 +N+ L SHHGS++KE R EQ Sbjct: 300 YINDAAGESL-------------------------------VYSHHGSLAKELRLTVEQK 328 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+GEL+ +VAT+SLELGID+G +D VI V TP S+ + +QRIGRAGH VG VS+G+ FP Sbjct: 329 LKNGELKGIVATNSLELGIDIGKLDTVILVQTPPSLTAAIQRIGRAGHSVGQVSRGILFP 388 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 RD V++AV+ + A +E +TP PLDVLAQ ++ A++ DE Y+ ++ + Sbjct: 389 ICGRDFVEAAVVSRSLPAVEIELITPIEAPLDVLAQVLLSMTAVETWDADELYAFLKTSY 448 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+++L R+ +D L+ML+GRY +P+++W++ + AR G L GGTIP Sbjct: 449 PYRNLSRKSYDLLLEMLAGRYADTRLRELKPRIIWDKLDRTIKARDGVARLVYLGGGTIP 508 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 DRG Y + L + + K +GELDEE V+E V + LG W+I IT + V V P Sbjct: 509 DRGYYDLRLLDTKAK-----IGELDEEFVWERSVGETFMLGTQVWKIMCITHNDVEVIPG 563 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG----AFFSGTIPPWLAEENTIANIQ 666 +PFWR E R E IG FL +F + P + + Sbjct: 564 AQTINIIPFWRAEEQNRDFFYSEKIGLFLEEAEQNLKTDSFAHQLVTPNTWSVYAVERLI 623 Query: 667 GLIEEQRNATG-IVPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHEPWAVAIAGRIH 722 ++ Q+ A G +P H+++E D + ++I+H+ +G +V+ P+A+ +A Sbjct: 624 EFLKRQKEAAGQPLPHRHHILIEHFADPLNTADSKQVIVHTLWGGKVNRPFAMGLAAAWE 683 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 +G + S++ I+ +P L P+ L +R + SS F A+FRE Sbjct: 684 QKFGYPLEIYVSNNSIMLMLP--HSFALQELFSLVSPQNLEDFLRGKLESSGFFGAKFRE 741 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 A ALL+P R PLW RLRA +L Y DFP+++ET R CL+D +DL ++ Sbjct: 742 NAGTALLLPRVNFKKRMPLWLNRLRAKKLQAAVSSYADFPIMIETWRTCLKDEFDLDMVK 801 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 +L+ +N G I+IS+ T PSPFA+ +++ ++MY+ D P ++R++ L ELL+ Sbjct: 802 QLLDEINDGRIKISETVTHQPSPFASDVIWRQTNKYMYEDDTPFSDRQS---GLSGELLK 858 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTG 962 L+ + ++RQ+ +L+R APG E L ++E + ++ A Sbjct: 859 ELVYSPHLRPEIPEALVRQLNGKLKRTAPGYAPTDGEELLLWIKERLFIPADEAASLFAA 918 Query: 963 SSEEV--ASYLENLLAVKRIFPAMI-------SGQERLACMDDAARLRDALGV-----RL 1008 ++ A + L +KR + + Q L ++ R+ LG L Sbjct: 919 MERDLQSADHKLTLEKIKRTLGDKLAWLHLPGAEQPGLCALEILPRIVACLGAVFSDLVL 978 Query: 1009 PESLPEIYL---------------HRVSYPLRD---------LFLRYLRAHALVTAEQLA 1044 +P+ + P ++L + V + ++ Sbjct: 979 HPLIPQAVSQMSAGLSKVAALFEQETAAEPGEFGGDVTDTALFVSQWLSYYGPVPRDFVS 1038 Query: 1045 HEFSLGIAIVEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRP 1098 L + + L L ++ ++ + E RL + +A R+ +P Sbjct: 1039 RCLGLPVNVSAAVLAILLKEECIVADVFTQEAGEAEVCERENLERLFAMARRARRQEDKP 1098 Query: 1099 VAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWES 1158 + T L QGV+ ++ + +EQL G+ A LWE Sbjct: 1099 LPVTALPLFLATYQGVVEKGTN---------------MEDLQARLEQLFGLISQAQLWEE 1143 Query: 1159 QILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQAN 1218 ILPAR+ Y + +D L+ T ++W G+ + V L+E E F PAE Q Sbjct: 1144 AILPARLETYYTSWMDSLMQTSDLVWFGRG-----NKRVVFCLREDL-ELFPPAEEGQGP 1197 Query: 1219 RSALQQAIVAVLADG-GAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWA 1277 +Q + D G + +S+ + L + LW VWQG I +D +A Sbjct: 1198 EDKVQAR--DLFPDPLGKYDFFTLSRHTG------LPSDDLTQRLWRHVWQGNIANDSFA 1249 Query: 1278 PL-RALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQV----EP 1332 L R L + + + R G + L G W L +P Sbjct: 1250 VLRRGLLTKFTPLQVEGKHGFGRRSGY---------SRWSASRPLQGNWYALSECEEKDP 1300 Query: 1333 LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGL 1392 + E + + RYG++ R+ + E + + R ME SG I G F + Sbjct: 1301 IEREELVKERIRQLFSRYGVLFRELIQQELPEMQWRRIFRTLRLMEFSGEIYAGHFFAQI 1360 Query: 1393 GGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRA 1452 G QFA R L + L+A DPA+ G LP +PTR A Sbjct: 1361 IGLQFASREANRLLHK------GLNEKSIYWLNAADPASPCGLKLPGLDED---LPTRLA 1411 Query: 1453 GALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE--PRLRFTLTEVN 1510 VV G +L L + GK++L+ ++ PE F T L RE P + +N Sbjct: 1412 TNFVVFHGTRLKLVAKRNGKELLIKAGPDDASLPEYFAFCKTLLTREFNPLKSIVVESIN 1471 Query: 1511 DLPVRQTPMFTLLREAGFSSSPQGL 1535 P ++P L+ GF +GL Sbjct: 1472 GRPALESPYKKALQGIGFIGEYKGL 1496 >UniRef50_A3ZQS6 DEAD/DEAH box helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQS6_9PLAN Length = 1467 Score = 1154 bits (2986), Expect = 0.0, Method: Composition-based stats. Identities = 435/1579 (27%), Positives = 677/1579 (42%), Gaps = 223/1579 (14%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P R+WF F +PT Q Q W A + L+ APTGSGKTLAAF+ LDRLFR Sbjct: 4 DQFHPIVREWFQTKFGEPTDAQAQGWPSIAGRRNTLIAAPTGSGKTLAAFMVCLDRLFRR 63 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 R + ++Y+SP+KAL D+QRNL PL+ I + RRG +R +RT Sbjct: 64 ----WMAGSLRDATYVVYVSPLKALSNDIQRNLDTPLEEICNLAERRGILPPQIRTAVRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP+ ER K+ R PP IL+TTPESLYL+LT +AR+TL+ V+TVI+DE+HA+A KRG+ Sbjct: 120 GDTPSSERQKMVRRPPHILVTTPESLYLILTAPKARQTLQHVDTVIVDEIHALARDKRGS 179 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP--------VTVVNPPAMRH 243 HL L+LERL+A+ H RIGLSAT + ++AAFL G +V+ R Sbjct: 180 HLTLTLERLNAVCHERPVRIGLSATQKPIEEIAAFLVGAPHAEESEATRCEIVDAGHRRD 239 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 +++VVP ++ V S W + +++ + HRST+VF N+R Sbjct: 240 LDLQVVVPPTPLEAVCS--------------NEQWAEVYEQLIELIQSHRSTLVFVNTRR 285 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 +AE++ RL E + SHHGS+SK+ Sbjct: 286 MAERVAHRLTEALGEEV-------------------------------ITSHHGSLSKDI 314 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R EQ LK+G+L+ +VAT+SLE+GID+G +DLV+Q+ + S+A+ LQR+GR+GH + Sbjct: 315 RHSAEQRLKAGQLKAIVATASLEMGIDIGYIDLVVQIGSSRSIANFLQRVGRSGHSLRAT 374 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 KG P TR +L++ ++ + G L+ + P PLD+LAQQ VA A + E + Sbjct: 375 PKGRLMPLTRDELIECCALMRAIGKGVLDKIEIPEKPLDILAQQIVAEVAAEDRDETELF 434 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 RRA P+++L R+ +D+ L++L+ L + G+L AR GA++ A Sbjct: 435 HLFRRAYPYRNLQRKEYDSVLEILNRGLTRS--IKNGAYLHRDPINGMLKARRGARIAAC 492 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 TSGG IPD Y V+ + VG +DE+ ES D+ LG TSWRI + Sbjct: 493 TSGGAIPDTAQYRVVTEGEKVF-----VGSVDEDFAIESLAGDVFLLGNTSWRIAYVRNG 547 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP---------- 653 +V+V A G+ +PFW GE GR EL I +A + Sbjct: 548 EVVVNDAQGQPPSIPFWFGESPGRTVELSSEISLLREEMAQRIIAADRDRSREKIQLPAL 607 Query: 654 ----------------------PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCR 691 LA + Q++A G+VP R +V ER Sbjct: 608 SVGVLENSFDQLDAETVAWVESECLASRFAAMQAVRYVAAQQSAIGMVPTQRQIVFERFF 667 Query: 692 DEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPD 751 DE G ++++HSP G R++ W +A R + + A DDGIV + + Sbjct: 668 DESGAMQLVVHSPLGTRINRAWGLAFRKRFCRSFDFELQASADDDGIVLSLGPQHSFPLE 727 Query: 752 AAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQL 811 + E +++ +A+ + +F R+R RAL + + G + P R RA + Sbjct: 728 DMFRMLTIESGPKLLEQALLAVPMFGVRWRWNVTRALALLRFSGGKKVPPHMLRFRADDM 787 Query: 812 LEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 L A YPD P++ +TL +C+ + DL ++++ + G ++ Sbjct: 788 LAAAFPDQVGCLENHGADIEYPDHPIVQQTLHDCMTEAMDLDRWKQMLIDVQEGRVEFVP 847 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQ 917 T PSPFA + F+ APL ERR ++ L + + ++ L + Sbjct: 848 RDTREPSPFAHERINANPYAFL--DPAPLEERRTRAVATRRTLSTSEMKELGK---LSYE 902 Query: 918 VIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAV 977 I V +E + + + L D+L + + + + + + L Sbjct: 903 AISTVRQEAWPV-----VRDADELHDVLASMIVLP--------QTLASDWSPHFTRLAEQ 949 Query: 978 KRIFP-AMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSY---------PLRDL 1027 R G+ +++ P + + + + ++ Sbjct: 950 GRAVRYTRPGGEPLWVALENLP----IAQAVWPAGVSQPAIEVPASLQREIESHTARVEV 1005 Query: 1028 FLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL----------QQDIWVS 1077 + +AE+L+ + L + V + L +G V+ + W Sbjct: 1006 IRGQVPYLGPFSAEELSSQLDLPASSVFAACEALEAEGTVLRGQFYDNPQQTQETTQWCD 1065 Query: 1078 DEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVD 1137 + R+ ++ RE RP + TY R L+ +L G Sbjct: 1066 RRLLARIHRLTISGLREQIRPASPETYLRFLVRHHDLLRKIKN-------------SGPR 1112 Query: 1138 GVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD--- 1194 + + +EQL G A WE +L R+ DY + LDELLA+G W + + Sbjct: 1113 ALRKSLEQLQGFQSAAGSWERSLLSGRMDDYDGQCLDELLASGEATWGRLRPPLPNGEEQ 1172 Query: 1195 ----------GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQR 1244 + T +A ++ L GA F Q + Sbjct: 1173 KSMASLRKSLPMTIALRANLGWLLPTDHAPAEALARGNATDVLDSLKQRGALFDQDL--- 1229 Query: 1245 IRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRP 1304 +I + + L+EAL L G+IT D +R + R + RR Sbjct: 1230 ---RILTKLLPTHLEEALRELAALGLITCDSLVGVREMVDDVLKKRKAKRR--------- 1277 Query: 1305 VYAQPVSPRVSYNTPNLAGRWSLLQV--EPLNDTERMLALAENMLDRYGIISRQAVIAEN 1362 P GRWSL E L+ E +L RYG++ R + E+ Sbjct: 1278 ------------GAPTRTGRWSLFPGIVETLSSDEHAQNWCWLLLSRYGVVFRDVLTRES 1325 Query: 1363 IPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPV 1422 + + R ME G I GRF+ + G Q+A TI LR L + + Sbjct: 1326 TAPPWWRLVACFRRMERRGEIRGGRFIADVAGEQYATEATIYALRKLRNDESVDDW---I 1382 Query: 1423 ALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEE 1482 A+SA DP N++G + PA +G +V+ G+++ G + Sbjct: 1383 AISAADPVNLFGVVTAGGRIPAI------SGNSLVIRNGQIVASKRSGKIDFHI------ 1430 Query: 1483 LLAPEVFHALTTALRREPR 1501 +APE H +T AL R Sbjct: 1431 DVAPEEVHEMTRALHAGRR 1449 >UniRef50_D2QY58 DEAD/H associated domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QY58_9PLAN Length = 1510 Score = 1145 bits (2962), Expect = 0.0, Method: Composition-based stats. Identities = 459/1590 (28%), Positives = 702/1590 (44%), Gaps = 199/1590 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F+P R WF F QP+ Q W A H LV APTGSGKTLAAFL LD+L R Sbjct: 4 EHFTPLVRQWFTARFGQPSDPQTHGWPAIAAGRHTLVAAPTGSGKTLAAFLVCLDKLVRA 63 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + T +++++Y+SP+KAL D++RNLQ PL +++ +++G E+ +RV +RT Sbjct: 64 WQDGTLGQ----STQVVYLSPLKALSNDIERNLQQPLAELSELAKQQGLGELPIRVAVRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT +R + ++PP IL+TTPESLYL+LTS + R TL VETVI+DE+HA+A KRG+ Sbjct: 120 GDTTQSDRQSMLKHPPHILVTTPESLYLLLTSVKGRGTLTEVETVIVDEIHALARDKRGS 179 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL---GGDRPVTVVNPPAMRHPQIRI 248 HLALSLERL A QRIGLSAT R +A FL G +P V P + Sbjct: 180 HLALSLERLAAHTSKPLQRIGLSATQRPMDAIARFLVGRGVPKPPAVAKPSRRKKKPAAQ 239 Query: 249 -------------VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 +V V ++ ++ S + A W + + + HRST Sbjct: 240 PLLEAQPYTPDVHIVDVGHVRNLDLAISVPTSELAAVCSNEQWEEVYAQLSSMIQSHRST 299 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 +VF N+R LAE+++ RL EL SH Sbjct: 300 LVFVNTRRLAERVSHRLTELLGEEA-------------------------------VASH 328 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGS+SK+ R EQ LK+G+LR +VAT+SLE+GID+G +DLV Q+ +P S+A+ LQR+GR Sbjct: 329 HGSLSKQIRLDAEQRLKAGKLRAIVATASLEMGIDIGYIDLVCQIGSPRSIATFLQRVGR 388 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 +GH +G KG FP TR +L++ +V+ + G L+ + P PLD+LAQQ +A A + Sbjct: 389 SGHNLGATPKGRLFPLTRDELLECLALVQAVRRGDLDQIEIPEKPLDILAQQIIAMVAAE 448 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 D+ ++ + RA P+ LPR FD LDM+S G S + ++ +L AR Sbjct: 449 DWNEDDLFALITRAEPYHQLPRDEFDKILDMVSNGIKQGRLS--GGYVHRDQIHKMLRAR 506 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 GA++ A+TSGG IP++G Y V++ VG +DE+ +S + +I LG SW Sbjct: 507 RGARIAAITSGGAIPEQGEYRVVVEGEGTF-----VGTVDEDFAIDSMIGNIFLLGNNSW 561 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL------------- 642 +I+QI +V+V G +P W GE GR EL + + H L Sbjct: 562 QIRQIKPGEVVVADVHGAPPTIPHWFGEAPGRTIELSRQLSNLRHDLASQISDQLIDIMS 621 Query: 643 ---------ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDE 693 A + + + I Q+ A G+VP +V ER DE Sbjct: 622 RAQSDGMQCAPEDLAADVMRRCGCDAWGAEQAIRYIAAQKAALGLVPTIDKIVFERFFDE 681 Query: 694 IGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAA 753 G ++++H+ G R++ W +A+ R + + A D+G++ I D+ Sbjct: 682 SGGMQLVIHAALGSRINRAWGLALRKRFCRSFDFELQAAADDNGVLLSIGPQHSFPIDSL 741 Query: 754 IFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLE 813 + P +++ +AV + +F R+R A RAL + + G R P Q+ R+ LL Sbjct: 742 FGMLHPGNAQELLEQAVLAVPMFQIRWRWNATRALAVLRQQGGKRVPPHLQKFRSEDLLA 801 Query: 814 I--------AQGY------PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVT 859 + + PD P++ +T+ +CL + D+ ++ + G+I++ Sbjct: 802 TTFPETVGCLENHHGDIVVPDHPLVKQTMHDCLTEAMDIVRWTSILADIKSGKIELVARD 861 Query: 860 TTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVI 919 T PSPFA +L F+ DA L ERR +S L + LDP + Sbjct: 862 TREPSPFAHQMLNARPYAFL--DDAGLEERRTRAISTRRSLS---IDDYRDLTRLDPAAL 916 Query: 920 RQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVED----------LAQRHTGSSEEVAS 969 QV E + E L D L L + E+ LA+ SS + Sbjct: 917 AQVTREAW-----PTIRDAEELHDALTHLVLLLPEEAAPHDRLLRSLAKEGRVSSIDYPV 971 Query: 970 YLENLLAVKRIFPAM---ISGQERLACMDDAARLRDALG-VRLPESLPEIYLHRVSYPLR 1025 + P + ER + L + V LPESL + Y + Sbjct: 972 VKSDAEPAAAFVPGLGKAWFAAERWPVIRAVYGLTQSDPVVTLPESLEKQY--EPADARV 1029 Query: 1026 DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQD------------ 1073 +L ++ +TA LA L V L+ + +GLVM Sbjct: 1030 ELVRGRIQHSGPLTAAALAALLGLPKNQVFAALESVEAEGLVMRGNFTAIPPADSSTTKP 1089 Query: 1074 --IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPG 1131 W + R+ +L + V TY LL+ERQG+ Sbjct: 1090 DVEWCERRLLSRVHRLTLDGLKRRIEAVPPETYIELLIERQGLGQNAQR----------- 1138 Query: 1132 VYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLG 1191 +G++GV + QLAG PA WE ++L ARV Y + LD L G +IW Sbjct: 1139 --QGIEGVRETVLQLAGFESPAGAWEEKLLAARVAGYDPQWLDNLFLGGELIWGRLCPPS 1196 Query: 1192 EDDGLVALHLQEYAAESFTPAE-----------ADQANRSALQQAIVAVLADGGAWFAQQ 1240 D A L + E ++ ++ +L GA F + Sbjct: 1197 RDAASSAAALTRAMPLTILGREDRHWMIHREVTDQPPLVTSTAAEVLRILEMKGALFFGE 1256 Query: 1241 ISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRAR 1300 + + + + + L+EAL L G+++ D +A +R L + + TR++ + Sbjct: 1257 LQRLTQ------LLTTKLEEALAELSAMGLVSCDTFAAVRHLAGGNVRKNSRTRKATSSG 1310 Query: 1301 RGRPVYAQPVSPRVSYNTPNLAGRWSLLQV--EPLNDTERMLALAENMLDRYGIISRQAV 1358 GRWSL EP + LA +L RYG++ R + Sbjct: 1311 PL--------------------GRWSLFPGALEPPAADDIALAWCRLLLRRYGVVFRDLL 1350 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 E+ + S+ + R +E G + GRF+ G+ G QFAE + RLRDL T Sbjct: 1351 ARESTAPNWGSIIRMFRRLELRGEVRGGRFIAGVAGEQFAEEAVVTRLRDLRDNPTTD-- 1408 Query: 1419 YTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 +SA DP N+ G + P PA +V+ G+ + G ++ + Sbjct: 1409 --WTIISAIDPLNLSGLVTEGPRIPAIHK------NAIVIHRGRAVAAKVSG--RIEFFA 1458 Query: 1479 EKEELLAPEVFHALTTALRREPRLRFTLTE 1508 + LL E+ AL R + + Sbjct: 1459 AVDPLLQVEMRRALQLGKRPVGPEKLHVRT 1488 >UniRef50_A4BMP7 Probable ATP-dependent DNA helicase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BMP7_9GAMM Length = 1468 Score = 1138 bits (2945), Expect = 0.0, Method: Composition-based stats. Identities = 477/1561 (30%), Positives = 691/1561 (44%), Gaps = 176/1561 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA R WF + F +PTA Q Q W L+ APTGSGKTLAAFL A+D L REG Sbjct: 11 FQPAVRGWFEQRFGRPTAAQAQAWPAIYEGRDTLIAAPTGSGKTLAAFLAAIDALVREG- 69 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 +R+LY+SP+KAL DVQ+NLQ PL GIA++ R G + ++R +RTGD Sbjct: 70 ---LTTRLPDETRVLYVSPLKALSNDVQKNLQEPLAGIAEQLRTAGLPQPDIRAWVRTGD 126 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER+++ R PP IL+TTPESLYLMLT+ RE L GV +VI+DEVHA+AG+KRGAHL Sbjct: 127 TPQSERARMRREPPHILVTTPESLYLMLTAESGREMLAGVRSVIVDEVHALAGNKRGAHL 186 Query: 194 ALSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGGDRP--VTVVNPPAMRHPQIR 247 +LSL RLDAL+ RIGLSAT + + +AAFL G +V+ R + Sbjct: 187 SLSLARLDALVENRLGKPPTRIGLSATQKPIATMAAFLTGRDAGRCNIVDTGYTRDRDLS 246 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + VP A + V S + I + + H++T++F N+R LAE+ Sbjct: 247 LCVPGAPLSAVMS--------------NDTFGEIYDQLAGLIEAHKTTLIFVNTRRLAER 292 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L E +HHGS+++E R Sbjct: 293 AARHLAERLGEDA-------------------------------ITAHHGSLAREHRLEA 321 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ LK+GELR +VAT++LELGID+GAVDLV Q+ +P ++A+ LQR+GR+GH V + KG Sbjct: 322 ERRLKNGELRALVATAALELGIDIGAVDLVCQLGSPRAIATLLQRVGRSGHAVSALPKGR 381 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA-AAMDALQVDEWYSRV 486 FP +R DL + +++ + G L+ + P PLDVLAQQ VA AA+ + Y R Sbjct: 382 LFPLSRDDLAECTALLDAVRRGELDVIRIPVAPLDVLAQQIVAEVAAVGECEEAALYDRC 441 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 A P++DL R F AT+ ML+ + + + L R A+L A+T+G Sbjct: 442 ITAWPYRDLTREAFTATVRMLADGVTTRR-GRRAAHIHRDAVNARLRPRKSARLTALTNG 500 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 G IPD+ Y V+L ++G L+E+ +ES V DI LG TS+RI +I +V Sbjct: 501 GVIPDQFDYEVILSPA-----GLKIGSLNEDFAFESLVGDIFQLGNTSYRILKIESGRVF 555 Query: 607 VTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG------AFFSGTIPPWLAEEN 660 V A G+ +PFW GE GR EL + L A Sbjct: 556 VEDAKGQPPNIPFWFGEAPGRTDELSAAVSRLRVELEQRLTEGVAAACGWLEQELRIPVA 615 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 A + R A G +P +V ER DE+GD +I+HSP+G R++ W +A+ R Sbjct: 616 AAAQLADYYGAARAALGALPTQWCIVFERFFDEVGDMHLIVHSPFGSRLNRAWGLALRKR 675 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + + A +D IV + T + + + ++ +A + +F R+ Sbjct: 676 FCRKFNFELQAAALEDSIVLSLGATHSFVLEEVAGYLRSATVRDVLTQATLDAPMFGNRW 735 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEI--------------AQGYPDFPVILE 826 R A AL + G RTP QR A LL + A+ P+ P++ + Sbjct: 736 RWNATIALAVRRNFKGKRTPAQFQRSDAEDLLAVVFPDQLACAENLAGARVIPNHPLVDQ 795 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 TL +CLQD D+ LE L++RL GEI++ TPSP A ++ F+ D Sbjct: 796 TLADCLQDTMDIEGLEALLKRLEAGEIEVIGRDLPTPSPLAEEIINARNYAFL--DDGAQ 853 Query: 887 AERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 ERR + GQ LD I +V EE + + L D L Sbjct: 854 EERRTLAVRSGGYWSAEEAGQAQ----LDSAAIERVREEAW-----PDPRDADELHDALV 904 Query: 947 ELGPMTVEDLAQRHTGSS-------EEVASYLENLLAVKRIFPAMI-SGQERLACMDDAA 998 G +T + Q + E L +R + GQ+ + Sbjct: 905 VHGFLTRAEGEQGGRNPAGLADDLSGGWPRLFETLCVDRRAACVTLPGGQQVWVAAERLI 964 Query: 999 RLRDA-----LGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAI 1053 + L ++ L ++ LR+L L VT EQL L A Sbjct: 965 EFQVLFADLKLAPQIEPVLEGQPPADLTEALRELLRSRLEGLGPVTLEQLTAPLGLPEAA 1024 Query: 1054 VEEQLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARL 1107 L QL +G + W + R+ +LQ R PV+ Y R Sbjct: 1025 AAIALAQLEAEGFAIQGCFGAAATSIQWCERRLLARIHRYTLQRRRREIEPVSPQDYMRF 1084 Query: 1108 LLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRD 1167 LL G+L T G EGV G++RV+ L G LPA+ WES +LPARV D Sbjct: 1085 LLGWHGLLEGTAGG----------RAEGVGGLVRVLAMLEGFSLPAAAWESDVLPARVAD 1134 Query: 1168 YSSEMLDELLATGAVIWSGQKKL------------GEDDGLVALHLQEYAA---ESFTPA 1212 Y+ +MLD L +G + W + +AL + E Sbjct: 1135 YNPQMLDTLCTSGRIAWLRLNASHATNGDGKRRVGPVRNTPIALIERPALRFWQELVLAP 1194 Query: 1213 EADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVIT 1272 + SA + ++ VL GA F ++ + + + ++ L L G+ + Sbjct: 1195 PPEALKMSASARKLLEVLDTRGASFFHELQETAG------LLRTQAEDGLAELAAWGLAS 1248 Query: 1273 SDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVE- 1331 +D +A LRAL S R R + AGRWS L+ Sbjct: 1249 ADSFAGLRALLNRSGPRPAHAPR-------------TRIRRRRFAGLEEAGRWSRLRTVD 1295 Query: 1332 ------PLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMR 1385 L+D++ + +A +L RYG++ ++ + E+ + + + R +E G I Sbjct: 1296 SVNGAGRLSDSKTLEHIAWTLLSRYGVVFKRILERESSLPAWRELLYIYRRLEARGEIRG 1355 Query: 1386 GRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPAT 1445 GRFV G G QFA + LR V+LSA DP N+ G + P PA Sbjct: 1356 GRFVAGFAGEQFAAPEAVAALRKTRKAEFDGA---WVSLSAADPLNLVGIVTPGQRLPA- 1411 Query: 1446 LVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEE---LLAPEVFHALTTALRREPRL 1502 G V++ G + + G + + E E L + HA R E RL Sbjct: 1412 -----VPGNRVLLRDGLPVAFCEGGEVRFVGEYEPETQWKLRNHLLRHARPAKYRHEARL 1466 Query: 1503 R 1503 Sbjct: 1467 S 1467 >UniRef50_C1F8X5 Helicase, DEAD/DEAH domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8X5_ACIC5 Length = 1468 Score = 1130 bits (2923), Expect = 0.0, Method: Composition-based stats. Identities = 448/1543 (29%), Positives = 658/1543 (42%), Gaps = 206/1543 (13%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 M P +SL P ++WF F PT Q Q W L+ APTGSGKTLA Sbjct: 1 MPAPPIAASL--AWAHPVVQEWFTSRFGTPTEPQQQGWPHILAETPTLISAPTGSGKTLA 58 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL +DRL R+ E + ++Y+SP+KAL DVQ+NL+ PL I RG Sbjct: 59 AFLICIDRLLRKAIEGRLGF----GTEVVYVSPLKALSNDVQKNLEAPLHEIQQLALARG 114 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 +R +RTGDT ER ++PP IL+TTPESLY++LTS ++RE LR V TVI+D Sbjct: 115 YLCPPIRAAVRTGDTSPAERRARLKHPPHILVTTPESLYILLTSEKSREHLRRVHTVIVD 174 Query: 180 EVHAVAGSKRGAHLALSLERLDALL--------------HTSAQRIGLSATVRSASDVAA 225 E+HA+A KRGAHL L+LERLDAL+ H + RIGLSAT VA Sbjct: 175 EIHAMADDKRGAHLTLTLERLDALVTAENTLTPAASLLTHPAPLRIGLSATQNPIELVAE 234 Query: 226 FLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI 285 FLGG R V +V D+ A ++W + I Sbjct: 235 FLGGARGNEV------------KIVQCGQRRDLDVAIEVPTVPLGAVATNALWESVYDRI 282 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ 345 + V HRST+VF N+R + E++ +L E A Sbjct: 283 AELVREHRSTLVFVNTRRMVERIAFQLGERLGAEN------------------------- 317 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS 405 +HHGS+S++ R E+ LK+G++R +VAT+SLELGID+GAVDLV Q+ + + Sbjct: 318 ------VAAHHGSLSRKLRLEAERRLKAGDIRVLVATASLELGIDIGAVDLVCQINSTRA 371 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLA 465 +A +QR+GRAGH G KG FF TR DLV+SA ++ M +G L+ L P P DVL Sbjct: 372 IAVAMQRVGRAGHWRGATPKGRFFVTTRDDLVESAALLRAMRSGVLDRLEIPPRPFDVLM 431 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW 525 QQ VAA A + Y+ +RRA P++DLP + FD L +L+ S + L+ Sbjct: 432 QQIVAACAAEPWDERALYNILRRAHPYRDLPWQEFDQALCLLTEGIESSR-GRYGAYLLR 490 Query: 526 NRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVN 585 +R + AR GA++ AVT+GGTIPD ++ V+ ++ LDE +S Sbjct: 491 DRIHSRVQARRGARITAVTNGGTIPDTALFPVIAQPE-----GVQIATLDEHFAVDSSPG 545 Query: 586 DIITLGATSWRIQQITR-DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL-- 642 D+I LG TSWRIQ++ +V+V A G+ LPFW GE R AEL E + + Sbjct: 546 DVIQLGNTSWRIQRVESAGRVLVEDAQGQPPTLPFWTGEAPQRTAELSEFVSSLRTEIDC 605 Query: 643 ---------------ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVL 687 + E+ + I E R G VP +V Sbjct: 606 RTRGAQPGYLSLAVPEIAEAAAWLQQECCVCESGAKQLLQYIIEGRAGLGAVPSVTTIVA 665 Query: 688 ERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDG 747 ER DE G ++ILH+P+G R+++ W +A+ R + + A+D+GI + + Sbjct: 666 ERFFDEGGGMQLILHAPFGGRINKAWGLALRKRFCRGFNFELQAAATDNGINISLAEQHS 725 Query: 748 KLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLR 807 + +++ +A +S +F R++ A R+L + G + QR R Sbjct: 726 FPLSDVFQFLTTHTVRELLEQASLASPIFKNRWKWAAGRSLQLLRFQKGKKVAPQVQRTR 785 Query: 808 ASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEI 853 LL PD P++ E +++ L++ DL L ++ ++ G I Sbjct: 786 GEDLLASVFPQAAACFENIEGDIQIPDHPLVAEVMKDVLREAMDLEGLTAVLEGIHSGRI 845 Query: 854 QISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGEL 913 Q V TTTPS FA LL F+ +A L ERRA + L Sbjct: 846 QCLAVDTTTPSAFAHELLHANPYAFL--DEAGLEERRARAIQLRGAPPA-------GAGR 896 Query: 914 LDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLEN 973 + P+ I ++ L + E L DLL L + + H + + + Sbjct: 897 ISPESIDEIRATLW-----PDIRDEHELHDLLCSLVLVPA---SLAHDARTAHWGLWFAH 948 Query: 974 LLAVKRIFPAMISGQERLACMDDAARLR----DALGVRLPESLPEIY-LHRVSYPLRDLF 1028 L + R A + + A L A + +LP LR Sbjct: 949 LESTHRAVIATCNSHSYFCAAERIAWLERLWPQATFTQSVPALPHAAPPEHPEEILRKAI 1008 Query: 1029 LRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQD----------IWVSD 1078 +++ TA L + V +Q L G ++ + W Sbjct: 1009 QGWMQILGPATARTLGERLGIAPHEVWKQFLVLETTGTMLRGVFEQLAPEDDLDIEWCER 1068 Query: 1079 EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDG 1138 + +R+ ++ R+ PV TY R LL+ Q + P G DG Sbjct: 1069 RILQRIHKATIGRLRKQVEPVPPATYLRFLLDWQHIAPQRQ-------------LTGEDG 1115 Query: 1139 VMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKK--------- 1189 ++ + L G PA WE +LP RV +Y LD L TG V W Sbjct: 1116 LLEALRGLQGYEAPAIEWERHLLPQRVANYDPRWLDALCLTGVVGWGRISPHPAFQSPDS 1175 Query: 1190 ------LGEDDGLVALHLQEYAAESFT-------PAEADQANRSALQQAIVAVLADGGAW 1236 + + L+E A P A S L + + LA+ GA Sbjct: 1176 GGPRRVVPTSMAPITFFLREEAHWMDRCLAARQIPEAHLAACLSELANRVRSCLAERGAM 1235 Query: 1237 FAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRS 1296 F+ +++ + + ALW LV G++T+D + LR + + + T Sbjct: 1236 FSADLARLLAAP------PGEISHALWELVAAGLVTADGFDALRQILHPHAKSSTKASPR 1289 Query: 1297 HRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLND---------TERMLALAENML 1347 RR N AGRWSLL + +++ + +L Sbjct: 1290 TGLRR------------------NAAGRWSLLAGDSSASDASYPAQRLDQQIESACLMLL 1331 Query: 1348 DRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLR 1407 DRYGI+ R + E + + + R +ED G + GRFV G G QFA + LR Sbjct: 1332 DRYGIVFRDLALEETTLPRWRDLHAMFRRLEDRGLVRGGRFVSGFTGEQFALPQAMKALR 1391 Query: 1408 DLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTR 1450 + T V ++A DP N+ G +LP A P R Sbjct: 1392 ACRQRPLATMPP--VTVAAADPVNLIGTVLPGERTAAI--PGR 1430 >UniRef50_Q2SEQ3 Lhr-like helicase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEQ3_HAHCH Length = 1472 Score = 1129 bits (2920), Expect = 0.0, Method: Composition-based stats. Identities = 468/1544 (30%), Positives = 716/1544 (46%), Gaps = 118/1544 (7%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 S +F P +WF PT +Q + W A EH L+ APTGSGKTL AFL+AL+R Sbjct: 2 SQALALFHPLIAEWFAANLGAPTDIQSKAWPRIASGEHCLITAPTGSGKTLTAFLWALNR 61 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + +RILYISP+KAL D++ NL PL + R+GE +R Sbjct: 62 FAT-------GELQPGRTRILYISPLKALNNDIRNNLSRPLAELTACFERKGEPFPLIRA 114 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL-RGVETVIIDEVHAVAGS 187 R+GDTP+ ER ++ R PP+ILITTPESL L+L+S++ +L + ++TVIIDE H++ G Sbjct: 115 QTRSGDTPSGERRQMLRQPPEILITTPESLNLLLSSQSGLSLLQDLDTVIIDEAHSLLGV 174 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRGA+L ++ERL L QRI LSAT+ S A F + V P R+PQ R Sbjct: 175 KRGAYLISAVERLVDLSG-EFQRIALSATINPVSAAADF-VAGYELDVRQPDYARNPQYR 232 Query: 248 ----IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 +V + +H + +W + +L + +R+T++FTN+R Sbjct: 233 KRPVTLVESHAAKHYRLSVNYPAAIAHRSADKHLWDALAETLLTRIQANRATLIFTNNRA 292 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 L EKLT ++N+ A + +HHGS+S+E Sbjct: 293 LCEKLTYKINQAADAMVAY-------------------------------AHHGSLSREI 321 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R E+ LK GEL +VATSSLE+GID+GA+D V+ V T SVA+ +QR+GRAGH VG V Sbjct: 322 RTEVERRLKGGELAAIVATSSLEMGIDIGALDEVVLVQTAGSVAAAIQRVGRAGHNVGDV 381 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 S G FP +D ++SAV+ + + LE + P PLDVLAQ ++ + +DE Y Sbjct: 382 SVGSLFPTHPQDFLESAVLAKAIMEKDLEPVRPLQCPLDVLAQVIISMTGVATWDLDELY 441 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 + +R ++ + +L RR FD +DML+GRY + ++ +R +TARPGA L Sbjct: 442 AHLRMSSVYHNLSRRQFDLLIDMLAGRYAESRIRELQARVSVDRIDNAITARPGALLSLY 501 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 SGG IPDRG + + + S R+GELDEE V+E+++ TLGA W+IQ+IT + Sbjct: 502 QSGGVIPDRGYFHLR-----HQDSSARIGELDEEFVWEAKIGQSFTLGAQFWQIQKITHN 556 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP----PWLAEE 659 V V PA ++ PFW+ E R E IG FL L + + Sbjct: 557 DVFVLPAKAGASTPPFWKAESISRNFHFSEQIGLFLEHLDANLDAPDIVATLQSQYYMTA 616 Query: 660 NTIANIQGLIEEQRNATG-IVPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHEPWAV 715 ++ + QR TG +P HL++E +G +++LH+ +G V+ PW + Sbjct: 617 EVADSLLDFLRRQRAHTGRPLPHRHHLLVEIVDSILGHSHGRQMVLHTGWGAEVNRPWGM 676 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 A+ + V S++ IV ++P+ DA + L PE++ ++R + S Sbjct: 677 ALEAAWLESFSEQPVVYVSNECIVLQMPEE--IPVDAILSLVSPERIEALLRARLEGSGF 734 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 F ARFRECA RALL+ R PLW RL++ +LL Y DFP++LET R CLQD Sbjct: 735 FGARFRECAGRALLLSKGKFNERRPLWMSRLQSQKLLNSVLKYEDFPILLETWRTCLQDE 794 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 +DL AL++L+ L +IQ S T TPSP A ++ + V +MY+ D P +++ + + Sbjct: 795 FDLTALKQLLEELQTEQIQWSVANTRTPSPMAQNIAWEQVNLYMYKDDTPTSDKTS---N 851 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVED 955 L +LLR LL + ++ ++ ++ ++ QRLAPG L D ++E G + + Sbjct: 852 LSEDLLRELLYNDELRPTVNAELCQRFVQKRQRLAPGYAPDSARDLLDWIKERGAIPDSE 911 Query: 956 LAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEI 1015 R E S E L + I ER AR A + PE Sbjct: 912 --WRELLFCIESESGNETLQDMLSATETKIIRLERRNAQVIVARENQASFAQ--AFYPEA 967 Query: 1016 YLHRVSYPLRD-LFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDI 1074 S L D L +LR + V+A +++ + ++ L L E ++ Sbjct: 968 DADAESDALFDTLLGEWLRFYGPVSATEISLWLGVDPQRLQRALDDLVEARAIVAGPLIE 1027 Query: 1075 ------WVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 + E F L + + A P+ L Q + D P Sbjct: 1028 GNAELRYCDRENFEILLHMARKEAAPEFAPLPLEQLPLFLHCWQTLTCERDDDPH----- 1082 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 + + ++++L G PA+LWE++ILPAR+ DY+ +LD L + W G Sbjct: 1083 --------ERLFDIVQRLQGTPAPAALWENEILPARLPDYNPALLDHLFQESDLEWLGV- 1133 Query: 1189 KLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDK 1248 ++G PA ++ L+ V + + Q +S Sbjct: 1134 ----EEGKTLFCFAADLDLLDAPAPLNEEAAEDLRALFPDVDSR---YDFQALS------ 1180 Query: 1249 IGESVDLSALQEALWALVWQGVITSDIWAPLR-----ALTRSSSNARTSTRRSHRARRGR 1303 +D + L E LW VW+ I +D +A LR T + ++S R R R R Sbjct: 1181 GKSGLDNTTLTERLWDWVWKQRINNDAFAALRRGVENKFTIPNLPTQSSGRPPSRRRAMR 1240 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENI 1363 +AQ S T RW L Q +P+ + ER A +L RYG++ R+ + E Sbjct: 1241 HSFAQSKQAANSPGT-WRQVRWPLRQDDPITEQERGKDRARLLLSRYGVVFRELLQRELP 1299 Query: 1364 PGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVA 1423 + ++ R ME S I+ G F + + G QF + L+ Sbjct: 1300 EMRWSAVFRSLRLMELSREIIGGYFFKDIPGPQFITPNALQMLQ------NGLPQTRLYW 1353 Query: 1424 LSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEEL 1483 L+A DPA++ G L +P R + G +L++ + GK++ + + Sbjct: 1354 LNATDPASLCGLGLTGLKQ---KLPKRLDSIHMSFMGPELIMVARRNGKQLDIMIPPDHP 1410 Query: 1484 LAPEVFHALTTALRR--EPRLRFTLTEVNDLPVRQTPMFTLLRE 1525 L+ L R +P L +N +P L Sbjct: 1411 DLDACLAPLSNLLHRSCQPLKSINLDTINGEKAVDSPYLPHLSR 1454 >UniRef50_Q01U88 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U88_SOLUE Length = 1348 Score = 1116 bits (2888), Expect = 0.0, Method: Composition-based stats. Identities = 443/1478 (29%), Positives = 648/1478 (43%), Gaps = 180/1478 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P ++WF R PT Q + W V E L+ APTGSGKTLAAFL +D L R Sbjct: 5 LDPLVQEWFDR-LGAPTEPQLRGWPVIRAGEDVLISAPTGSGKTLAAFLICIDSLVRRA- 62 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R + ++Y SP+KAL DV +NL+ PL I RG +RVG+RTGD Sbjct: 63 ---RTGELPDHTEVVYCSPLKALSNDVHKNLERPLAEIRALAEERGVKLAPIRVGLRTGD 119 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A +R ++ R P IL+TTPESLY++LT+ + RE L GV TVI+DE+HAVA KRG+HL Sbjct: 120 TKASDRQRMLRERPHILVTTPESLYILLTAEKPREMLAGVRTVIVDEIHAVADDKRGSHL 179 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 AL+L RLD L QRIGLSATV+ +VAAFL +V+ R ++ + VP Sbjct: 180 ALTLARLDRLAG-RPQRIGLSATVKPLEEVAAFLS--DKACIVHVGHRREMELAVEVPRD 236 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + V+S +W I + + + +R+T++F N+R L+E++ L Sbjct: 237 ELGPVAS--------------NEMWGGIYDRLAELIAANRTTLIFVNTRRLSERVAHHLG 282 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E HHGS+S+ R E+ LK Sbjct: 283 ERLG-------------------------------PGAVLPHHGSLSRPLRLEAERKLKD 311 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GELR VVAT+SLELGID+G VDLV Q+ +P ++ LQRIGRAGH VG + +G F TR Sbjct: 312 GELRAVVATASLELGIDIGTVDLVCQIGSPRAIGVALQRIGRAGHWVGAMPRGRLFTTTR 371 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +L++ A +V + G L+ L P N LD+LAQQ VA A + DE + R P++ Sbjct: 372 DELIECAALVRAIRKGELDKLEIPCNALDILAQQIVACCATEEWGEDELFELARATWPYR 431 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 LPR FD + +LS S L + L R GA+L A+TSGG IPD Sbjct: 432 TLPRSDFDDVVAILSEGI-STARGRSGAYLHRDAVNRRLRGRRGARLAAITSGGAIPDSA 490 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 Y V+ +G +DE+ ES D+ LG TSWRI+++ +V V A G Sbjct: 491 NYLVVAEPE-----GITIGTVDEDFAVESLAGDVFLLGTTSWRIRRVEAGRVRVEDAHGA 545 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGA--FFSGTIPPWLAEENTIANIQGLIEE 671 +PFWRGE GR EL + +A + + E Sbjct: 546 PPGIPFWRGEAPGRTIELSHEVSALREQIASRGVEAVEWLAAECGLDRRGAEQAAEYVRE 605 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 A G +P + +V ER DE G ++ILH+P+G R++ W +A+ R + + Sbjct: 606 GCAALGALPATNTIVAERFFDEGGGMQLILHAPFGARINRAWGLALRKRFCRSFNFELQA 665 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 A+D+GIV + + D PE ++ +A+ + +F AR+R A RAL + Sbjct: 666 AATDNGIVISLGEQHSFPLDVVFEFVRPENAKYVLTQAMLDAPMFGARWRWNATRALAIL 725 Query: 792 GRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYD 837 G + P QR+RA L+ PD P++ ET+ CL + D Sbjct: 726 RFAGGRKVPPPIQRMRADDLMAAVFPDQAACAENLTGDIRIPDHPLVKETIDNCLYEAMD 785 Query: 838 LPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLD 897 L L ++R + G I+ + T SPF+ +L + Y DAPL ERRA + L Sbjct: 786 LVGLTEMLRCIEDGTIRTIAIDTAEASPFSHEIL--NANPYAYLDDAPLEERRARAVQLR 843 Query: 898 SELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLA 957 L ++ D LDP+ IR V EE L + + L + L + + Sbjct: 844 RTLRTDV---TDGAGALDPEAIRTVAEEAWPL-----VRDADELHEALLGMVILPA---- 891 Query: 958 QRHTGSSEEVASYLENLLAVKRIFP--AMISGQERLACMDDAARLRDALGVRLPESLPEI 1015 E A + L A R ERL + A L Sbjct: 892 ------RAEWARFFAELSAAGRATTMDGFWIAAERLDLVRRACPGAQFTPPLDAPPLSRA 945 Query: 1016 YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL----- 1070 + ++ + + A LA + +L I IVE L QL +G ++ Sbjct: 946 LPESREACVAEILRGWFECAVPLRASGLARDLALPIDIVEIALAQLEAEGQILRGHFLSR 1005 Query: 1071 ---QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAS 1127 + W + R+ ++ R PV T +A + Q + T Sbjct: 1006 GGDDEIEWAHRRLLARIHRLTIGRLRREIEPVTTTQFAAFVERWQHLAAGTQ-------- 1057 Query: 1128 TSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWS-- 1185 GV+G +RVI+QL G+ P + WES++LP R+ +YS +LDEL +G V+W Sbjct: 1058 -----LHGVEGALRVIQQLQGLEWPVAAWESEVLPRRIANYSPALLDELCLSGEVMWGRL 1112 Query: 1186 -------------GQKKLGEDDGLVALHLQEYAAESFTPAEADQAN-RSALQQAIVAVLA 1231 G++ +AL L+E A E A S + ++ L Sbjct: 1113 SPHPAFERQTDGQGRRVRPTRVAPLALFLREDAGWLLATPEPQPAEALSHAAREVLVSLQ 1172 Query: 1232 DGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNART 1291 + GA F ++++ + +++ALW LV G++T+D + LRAL + Sbjct: 1173 NRGASFFHELARNTDRAA------AEIEDALWELVAAGLVTADGFENLRALINPNRRHAV 1226 Query: 1292 STRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYG 1351 R AGRW+LL+ + + A +L+R+G Sbjct: 1227 RPRH-------------------------AAGRWALLRHAQDAPPDYVERFARQLLERWG 1261 Query: 1352 IISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLAT 1411 ++ R E + + + R ME G I GRF G QFA +D LR + Sbjct: 1262 VVFRDIAARETLAPPWRDVLVALRKMETRGEIRGGRFAAAFVGEQFALPEALDLLRAVRR 1321 Query: 1412 QATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPT 1449 A D W L PW A + +P Sbjct: 1322 --------------AGDVHVDWNTLPPWLAADRSALPA 1345 >UniRef50_C8RVX4 ATP-dependent DNA helicase (Fragment) n=2 Tax=Corynebacterium jeikeium RepID=C8RVX4_CORJE Length = 1398 Score = 1113 bits (2879), Expect = 0.0, Method: Composition-based stats. Identities = 572/1419 (40%), Positives = 765/1419 (53%), Gaps = 139/1419 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F WF F +PT VQ Q W + ++ALV+APTGSGKTLAAFL++L RL Sbjct: 7 DSFYAPVAAWFRDVFAEPTIVQTQAWRAISAGQNALVVAPTGSGKTLAAFLWSLSRLSGG 66 Query: 73 GG-EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 D K +++LYISP+KALG DV RNL PL GIA GET +RVG+R Sbjct: 67 SFFNDAPTPEKSSPTKVLYISPLKALGVDVSRNLAAPLAGIARVADAMGETAAPVRVGVR 126 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGA 191 +GDTP ERSKL RNPP+IL+TTPESLYLMLTS+A TL V+TVI+DEVHAVAG+KRG Sbjct: 127 SGDTPQSERSKLLRNPPEILVTTPESLYLMLTSKAAATLANVDTVIVDEVHAVAGTKRGT 186 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLG-------------------GDRP 232 HLALSLERL+ L + QRIGLSATV VA+FLG Sbjct: 187 HLALSLERLEMLTGRAVQRIGLSATVNPVDKVASFLGGDRPVTVVNPEQPKSWDVQVTSV 246 Query: 233 VTVVNPPAM--------------------------------------RHPQIRIVVPVAN 254 V P V Sbjct: 247 VEDFQDPPAVEDVALAEYEVAESEAASEKETEEALVDGAPVDEALLGPSLIGEGVGGSTQ 306 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + + VASG ++S ++ S+WP+++ I +V+ +RST+VF NSR AE+LT LNE Sbjct: 307 VGSGARVASGVDKESALPQQKSVWPHVQRAIYRQVMENRSTLVFVNSRRAAERLTGALNE 366 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 +A A + +AR+HHGSVSK++RA E ALKSG Sbjct: 367 EWAKEHDPDALAAPTRRDPAQMMAQSGAVRGMDGAGVARAHHGSVSKDERADIEAALKSG 426 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 ELRCVVATSSLELGIDMG VD V+QV P SVA+ +QR GRAGH VG S +P ++ Sbjct: 427 ELRCVVATSSLELGIDMGLVDHVVQVGAPPSVAAAVQRCGRAGHNVGATSHATIYPLHKQ 486 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM------------DALQVDEW 482 D + V+V+ + G LE L HN LDVLAQQTVAA AL V+EW Sbjct: 487 DAEAAVVVVDRLLKGELEPLHVVHNALDVLAQQTVAATVQAGAGGTSGADGTGALDVEEW 546 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + VRRA P+ LPR FD ++M+SGRYPS DF+ + + +++ G L ARPGAQ LA Sbjct: 547 WRVVRRAHPYATLPREAFDGVIEMISGRYPSTDFADLKARAIYDPVAGTLEARPGAQRLA 606 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITR 602 VTSGGTIPDRGM+ V L GE G+RRVGELDEEMVYESRV D+ TLGA+SWRI +I R Sbjct: 607 VTSGGTIPDRGMFGVFLAAGEND-GARRVGELDEEMVYESRVGDVFTLGASSWRILEINR 665 Query: 603 DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTI 662 DQVIV PA G + RLPFW G+ GRP ELG+ IG+ G +L + +T Sbjct: 666 DQVIVAPAAGHTGRLPFWVGDAAGRPVELGKAIGENRRTWGSGTLADIRSADFL-DAHTR 724 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 AN+ +EQ+ GI+P R +++ER RD+IGDWR+++H+P+GR V+ PWA+A+ ++ Sbjct: 725 ANLDAYYQEQKETAGIIPDERTVLIERFRDDIGDWRVVVHTPFGRGVNAPWALALGAELN 784 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIF------LFEPEKLLQIVREAVGSSALF 776 G DA VA DDG+V R+P +D + E L V E VGSSALF Sbjct: 785 RRTGIDAMAVAGDDGMVLRLPYSDEPPGMELLLGEGYSGAERAEATLADVMEEVGSSALF 844 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVY 836 AARFRE AARALL+P R PG R PLWQQR RA+QLL++A+ +P+FPV++ET+REC+ DVY Sbjct: 845 AARFRESAARALLLPRRNPGKRQPLWQQRQRAAQLLDVAREHPEFPVMVETMRECVHDVY 904 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSL 896 +L L+ L+ L +++++VTT PS FA SLLF Y + FMY+ D+ RA+ L++ Sbjct: 905 NLDFLKALVANLGQRGVRLAEVTTEAPSAFAESLLFTYTSAFMYEGDS---AERAAALAV 961 Query: 897 DSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDL 956 D LL +LG + G +LDP +R+V + Q LA GR+A E D+LR LGP++++ + Sbjct: 962 DPALLAKVLGTREEGMVLDPTAVRRVVDAAQWLAEGRQAASVEQAVDMLRALGPLSLDGV 1021 Query: 957 AQRHTGSSEEVASYLENLLA--VKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPE 1014 +R + V LE L R+ GQ +L ++D LRD LGV +P + Sbjct: 1022 RERIEPWAGTVEDSLEQLRELVPTRLIEVHFGGQLKLGAVEDMPLLRDGLGVPVPPGVAI 1081 Query: 1015 IY--LHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL------------QQ 1060 + +V + L LR+++ TA + A EF LG A + L Q+ Sbjct: 1082 AAEQVDQVDNAIDQLLLRWMKNRGPTTAAEAAAEFGLGRATSDALLARWAGGVQGTGKQR 1141 Query: 1061 LREQGLVMNLQ-----------QDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLL 1109 G ++LQ + +V + RRLR +L AAR + PV TYA+ L Sbjct: 1142 RLSAGHFVDLQAETQHTETQHTETQYVDTGMLRRLRSATLAAARGSLEPVTQQTYAQFLA 1201 Query: 1110 ERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYS 1169 + G+ + + +EQLAGV +PAS WE+ +LPAR+ DY Sbjct: 1202 DWHGLGQMQR-----------------EELASALEQLAGVPIPASAWETLVLPARIPDYQ 1244 Query: 1170 SEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQAN--------RSA 1221 LDELL+TG ++ G + G D + A E + Sbjct: 1245 PGDLDELLSTGEILAVGSGQAGAKDAWLCFIPAGMAEYLLEGGEGLERGVHKETVTTLGM 1304 Query: 1222 LQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRA 1281 + I+ L GGA+ A ++ D + ALW L G++ D +A +RA Sbjct: 1305 VATQILEHLQRGGAFLAAELQSVTGA------DPEEVDAALWELFDAGLVAPDSFAAVRA 1358 Query: 1282 LTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPN 1320 + R+ R +GR + R + Sbjct: 1359 RLAEAGPTGKQAHRAPRRNQGRGSARRVRMGRSGFARAA 1397 >UniRef50_B5E8L0 DEAD/H associated domain protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5E8L0_GEOBB Length = 1495 Score = 1113 bits (2878), Expect = 0.0, Method: Composition-based stats. Identities = 463/1582 (29%), Positives = 695/1582 (43%), Gaps = 161/1582 (10%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P DWF +PT VQ + W + H LV APTGSGKTLAAFL+A+++L Sbjct: 9 FHPLIADWFRETLGEPTLVQSRAWSEVMQERHVLVTAPTGSGKTLAAFLWAINQLVTGAW 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 +R+LY+SP+KAL DV+RNL PL + + ++ V R+GD Sbjct: 69 PCG-------ETRVLYVSPLKALNNDVRRNLTAPLFELRQHFAKHRVPFPDIGVMTRSGD 121 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER ++ R+PP+ILITTPESL ++LTS+ R TL GV TVI+DE+HAVAG KRG HL Sbjct: 122 TPGDERRRMLRHPPEILITTPESLNILLTSKGSRATLNGVATVILDEIHAVAGGKRGTHL 181 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ++ERL L QRI LSATVR VA F+GG R V + P+ +V Sbjct: 182 ITAVERLVLLSG-EFQRIALSATVRPLETVADFVGGLRQVGREHV-----PRPISIVRGD 235 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 S S E +WP + + + RHRST+ F NSR EK+T +N Sbjct: 236 RGKSFSLTISAPDEAGEKRAADELWPALTARFAEIIERHRSTLFFANSRRTTEKVTRLIN 295 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 EL L S HHGS+S+E R E+ LK Sbjct: 296 ELSGEELAYS-------------------------------HHGSLSREIRLAVEERLKR 324 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GEL+ +VAT+SLELGID+G +D V+ + TP S++S +QRIGR+GH VG VS G+ FP Sbjct: 325 GELKAIVATNSLELGIDIGRLDSVVLIQTPRSISSAIQRIGRSGHGVGEVSSGMLFPTYG 384 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 D V +AVI + G +E + P NPLD+LAQ ++ A + Q+D+ Y ++ P++ Sbjct: 385 MDFVSAAVIARAIADGEIEEVRPVENPLDLLAQIVLSMALAETWQLDDLYDFLKGCYPYR 444 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L R+ FD + ML GRY RP+ +R ++ RP +L GGTIP+RG Sbjct: 445 NLSRQQFDLVIGMLEGRYADSHVPELRPRATVDRLEQTISTRPALSMLIYLEGGTIPERG 504 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 + + L K ++GELDEE V+E R+ D LGA W+I ++T V+V PA Sbjct: 505 YFELRL-----KESGAKIGELDEEFVWERRIGDTFALGAQVWQITEVTHSTVLVVPARKS 559 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFL----HLLADGAFFSGTIPPWLAEENTIANIQGLI 669 +PFWR E R E I FL L + + + + ++ + Sbjct: 560 QQIIPFWRAEELDRDFFYSEKIASFLQHCDERLGEPELIEELMQRHFMDRDAARALESYL 619 Query: 670 EEQRNATG-IVPGSRHLVLERCRDEIGD---WRIILHSPYGRRVHEPWAVAIAGRIHALW 725 + Q+ +T +P HL++E+ RD +IILH+ +G V+ P+ A+ + Sbjct: 620 KLQKESTNAPLPHRHHLLIEQFRDPAAGAETEQIILHTLWGNAVNRPFTFALTAAWEKRY 679 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G ++DGI +P P+ + L PE + ++RE++ + F ARFRE A Sbjct: 680 GYPLQAFYNNDGIALLLPHDLE-QPEHLLELVTPENIEPLLRESMEGTGYFGARFRENAG 738 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RALL+ R PLW RLR+ +LL Y DFPV+LET R CL+D +DL L+RL+ Sbjct: 739 RALLLSRSNFKRRMPLWLNRLRSKKLLASVLRYRDFPVLLETWRSCLKDEFDLVNLKRLL 798 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 + G I ++ V TT SPFA L++ +++Y+ D RR+ +L S+L + + Sbjct: 799 EEIQDGSIYLTRVRTTKASPFAQGLIWQQTNKYVYEDDTLGGGRRS---ALGSDLPKEMA 855 Query: 906 GQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSE 965 L +++R E++ QRLA G L D +E + + Sbjct: 856 LSAHLRPRLPAELVRLFEQKRQRLAAGYAPDSPRELIDWAKERLLIPFSEWPLLLEAVRR 915 Query: 966 EVASYLENLLA--VKRIFPAMIS--GQERLACMDDAARLRDALGVR------LPESLPEI 1015 + E LL R+ + +A ++ L A + P + E Sbjct: 916 DSGLAEEELLPQIAGRLVALTLPKTEAPLVAAVEMIPELARAFALEKEELPWSPLAGDER 975 Query: 1016 YLHRVSYPLRDL----------------------FLRYLRAHALVTAEQLAHEFSLGIAI 1053 + L L R+L + + +L L + Sbjct: 976 MTALLQESLDRLWERNSLATDEGAEEEEPAAARSVARWLSYYGPIEVTRLQLTLGLSDQL 1035 Query: 1054 VEEQLQQLREQGLVM------NLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARL 1107 + + LQ L E G ++ + L ++ + A + + Sbjct: 1036 LRDTLQTLEETGAMLIDQFTEAATEPQICDAVNLEALLRMLRRSRKPAFEALDLSRLPLF 1095 Query: 1108 LLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRD 1167 L QG+ D + +EQL G L A LWE ++LPAR+ Sbjct: 1096 LATVQGLAAPGSS---------------ADDLRDRLEQLLGAPLSAPLWEEEVLPARLAP 1140 Query: 1168 YSSEMLDELLATGAVIWSGQKK------LGEDDGLVALHLQEYAAESFTPAEADQANRSA 1221 Y LD L+ + ++W G ED L + +E A Sbjct: 1141 YFGAWLDSLMQSSDLLWFGCGPKRLSFAFPEDLDLFQIQERENAPLEPGAKPPSPLIPDP 1200 Query: 1222 L-QQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLR 1280 ++ A+ G + + + + LW W G + +D +A +R Sbjct: 1201 RGHYSLTAICLMSG------------------LSPATVTKQLWQEAWSGELGNDSFAAVR 1242 Query: 1281 A----LTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDT 1336 +A + +R R R Q P Y P G L++ Sbjct: 1243 MGILNRFELPQHAASHSRHLRRPSGNRWSRVQEG-PGNWYLLPAQEGATDALEI-----E 1296 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 ER +L+RYGI+ R+ + E P + + R ME SG ++ G F G+ G Q Sbjct: 1297 ERNKDRVRVLLERYGILFRELLARELPPLQWSRLFRTLRIMEMSGEVLSGSFFTGIPGLQ 1356 Query: 1397 FAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALV 1456 F +L L+A DPA++ G L +P R + Sbjct: 1357 FISPEAYRQL------ERGMPTDAVYWLNAADPASLCGIGLDGLP---YRLPARLPSTHL 1407 Query: 1457 VVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE--PRLRFTLTEVNDLPV 1514 V G +L+L + GK++ + E ++ PE T L R+ P R + +N P Sbjct: 1408 VYRGAELVLVSRRYGKELEIKVEPDDERLPEYLRFFHTLLSRDFNPLKRIQVERINGEPA 1467 Query: 1515 RQTPMFTLLREAGFSSSPQGLD 1536 +P L GF + GL+ Sbjct: 1468 ASSPYAGALLSFGFQQAYSGLE 1489 >UniRef50_D0LRM6 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LRM6_HALO1 Length = 1573 Score = 1113 bits (2878), Expect = 0.0, Method: Composition-based stats. Identities = 449/1607 (27%), Positives = 659/1607 (41%), Gaps = 235/1607 (14%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF F PTA Q Q W A E L+ APTGSGKTLAAFL LDRL + Sbjct: 31 FHPVVASWFRARFGSPTAPQTQGWPRIAAGEDTLIAAPTGSGKTLAAFLACLDRLIQR-- 88 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + + + ILYISP+KAL D+ RNL+ PL + + G +R +RTGD Sbjct: 89 --SLRSVLPERTHILYISPLKALSNDIFRNLETPLAELGEAFAEAGLCLPPIRTAVRTGD 146 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHL 193 TP ER+K+ + PP ILITTPES YL+LTS+ R L VETVI+DE+HAVA KRGAHL Sbjct: 147 TPQSERAKMAKRPPHILITTPESFYLLLTSKSGRAALSAVETVIVDEIHAVARDKRGAHL 206 Query: 194 ALSLERLDALLHTS----AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 LSLERLD L+ + R+GLSAT R +A +L G R + + Sbjct: 207 GLSLERLDRLVRSESGRAPVRVGLSATQRPIELIAEYLSG------------RARPLPHI 254 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 V + + T ++ A + I++ + +H +T+VF N+R L E++ Sbjct: 255 VDAGHARTLDIAIEITDDELGALASHEQMGRVYDRIVELIEQHHTTLVFVNTRRLVERVA 314 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 L E +HHGS+S+E R EQ Sbjct: 315 HALEERLGEER-------------------------------VVAHHGSMSREMRLAAEQ 343 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 LK G++ C VAT+SLELGID+G VDLV+Q+ +P S+A+ LQRIGR+GH G+ KG F Sbjct: 344 KLKFGQVACAVATASLELGIDVGPVDLVVQLGSPRSIATMLQRIGRSGHSRRGLPKGRLF 403 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 TR LV+ A +V + L+ + P +P D+LAQQ VAAAA + L+ DE ++ V A Sbjct: 404 ALTRDQLVECAALVRAVCKHNLDAIEPRMSPFDILAQQIVAAAACEDLEQDELFALVSGA 463 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 +++L R FD L MLS S + W+R G + AR GA+L A+TSGG I Sbjct: 464 FHYRELAREDFDKILLMLSEGV-SDRRGRATAHIHWDRIGGRIKARRGARLAALTSGGAI 522 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD Y V+L E R+GE+DE+ ES D+ LG WRI+++ +V+V Sbjct: 523 PDNANYQVVLYPEEL-----RIGEVDEDFAIESSPGDVFLLGNAPWRIRRVETGRVLVED 577 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP--------WLAEENT 661 A G +P W GE GR EL E +G + Sbjct: 578 ARGAPPTVPHWVGEAPGRTIELSEEVGTLRDEVEARIAAGEAPADIAAWVGEVACMPRTA 637 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + + E R A G +P +R L+ ER DE G ++++H+P G R++ W +A+ R Sbjct: 638 AEQLVAYLREARGALGTLPTTRRLIAERFFDEGGGMQLVIHAPLGGRINRAWGLALRKRF 697 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + + A+DDGIV + + + +I+ +A+ + +F R+R Sbjct: 698 CRSFDFELQAAATDDGIVISLGQPHSFPLETVFQFLSSVSVEEILVQALLDAPMFEIRWR 757 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILET 827 A R+L + R + R+RA+ LL + + PD P++ ET Sbjct: 758 WNATRSLTVLRRYGAKKVAPHILRMRANDLLSVVFPQQQACLENIPGDREIPDHPLVAET 817 Query: 828 LRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLA 887 +R+CL + D+ L +L+ + G I++ T +PSP L+ F+ +DA Sbjct: 818 VRDCLTEAMDIERLRQLIADIENGRIEVLGRDTVSPSPLCHELIMANPYAFLDDADA--E 875 Query: 888 ERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRE 947 RR +SL L LD IR+ EEE + + + L D L Sbjct: 876 NRRTRAVSLRRSLPDQ-----GDATALDESAIRRAEEEAR-----PSVRDLDELHDALLS 925 Query: 948 LGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVR 1007 L + E L GSS A ++ L++ R + R AA Sbjct: 926 L-VLVPEPLGLSLAGSSALSAPLMDRLISDGRATRLRYDSRGRECVAWVAAERLPVARAA 984 Query: 1008 LPESLPEIYLHRVSYPLR---------DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQL 1058 +PE+ L + + + + +L + +LA E L A V Sbjct: 985 VPEAEELPALPPLPFAVEVPAPEEVDVRIVRAHLDYSGPRSGRRLADELGLPGARVLAAC 1044 Query: 1059 QQLREQGLVMNLQQD-------------IWVSDEVFRRLRLRSLQAAREATRPVAATTYA 1105 L G ++ W + + R+ +L R PV+A Sbjct: 1045 YALENDGAILRGSFTPGLSGKPEDDLDIEWCNRRILARIHRLTLARLRSEIEPVSAAALM 1104 Query: 1106 RLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARV 1165 R L Q V G DG++ V+EQL G A WE ++LPAR+ Sbjct: 1105 RFLFRWQRV-------------NHENRLIGEDGLLTVLEQLQGFETAAGAWERELLPARL 1151 Query: 1166 RDYSSEMLDELLATGAVIWSGQKKLGEDDG------------------------------ 1195 Y LD L +G V W Sbjct: 1152 HGYQPAWLDALCLSGQVAWCRLSPRMPSHPDPASEIDADDTSDSDSAAAHAGAANENAGA 1211 Query: 1196 --------LVALHLQEYAAESFTPAEADQANRSALQQA-----------------IVAVL 1230 L + A + R+ ++ I L Sbjct: 1212 GAGANGKRRGRLAPTKAAPLALLLRRDLDWLRAPSARSDSVFDRVDADRVESADDIAQAL 1271 Query: 1231 ADG----------------GAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSD 1274 A+G GA F ++ + G + +++ LW L G+ T+D Sbjct: 1272 AEGGFGDAARAVYAHLASAGASFLAELVR------GTGLAPEQVEDGLWQLAQAGLATAD 1325 Query: 1275 IWAPLRALTRSS--------------------SNARTSTRRSHRARRGRPVYAQPVSPRV 1314 +A LR L + + RA R + Sbjct: 1326 GFAGLRVLVDRAAGESRSLFDEVGRRSQDRKTGPRGAGSSAWQRAVRKARQRERQRPAHA 1385 Query: 1315 SYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLC 1374 + P AGRWSLL + A+A +L RYG+I R ++ E+ + + Sbjct: 1386 VRSLPTAAGRWSLLGPPDPAQVD-PEAVALQLLQRYGVIFRDLLVRESNLPPWREVLICL 1444 Query: 1375 RSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWG 1434 R +E G + GRFV G G QFA +D LR + ++A DP N+ G Sbjct: 1445 RRLEARGEVRGGRFVSGFVGEQFALPEAVDGLRSMRRAP---AIDEFTLITATDPLNLVG 1501 Query: 1435 NLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE 1481 P PA + G ++ G L G + E Sbjct: 1502 ITSAGPKTPAVM------GNAILFRNGVPLASREAGEIVLRQDLEPG 1542 >UniRef50_B1K9C8 DEAD/H associated domain protein n=14 Tax=Burkholderia cepacia complex RepID=B1K9C8_BURCC Length = 1518 Score = 1112 bits (2876), Expect = 0.0, Method: Composition-based stats. Identities = 446/1609 (27%), Positives = 659/1609 (40%), Gaps = 232/1609 (14%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA 65 P++ DVF P WF R F PT Q W LV APTGSGKTL AFL A Sbjct: 23 RPAARALDVFHPVVAAWFTRTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTLTAFLCA 82 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 LD L R+ + + ++Y+SP+KAL D+ NL PL GIA+ + G Sbjct: 83 LDDLVRDA--LAHDGTLPDATLVVYVSPLKALSNDIHVNLDAPLAGIAESLAQLGLPVPA 140 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAV 184 +R +RTGDT ER+ L + P +L+TTPESLY++L+S R+ L V +VI+DE+HA+ Sbjct: 141 IRTAVRTGDTTQAERAALRKRAPHVLVTTPESLYVLLSSASGRQMLSNVRSVIVDEIHAL 200 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVVNPP 239 A SKRG+HLALSLERLDAL + RIGLSAT + VA FL R +V+ Sbjct: 201 ASSKRGSHLALSLERLDALTGRALPRIGLSATQKPIDAVARFLVGGPADAPRDCAIVDTG 260 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 R + + +P ++ V + +W + I HR+T+VF Sbjct: 261 HTRERDLALELPNVPLEPVMAT--------------DVWEQVYDRIAGLAAAHRTTLVFV 306 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE++ L + +HHGS+ Sbjct: 307 NTRRTAERMARHLADRLGKDA-------------------------------IAAHHGSL 335 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 +KE R EQ LK GEL+ +VAT+SLELGID+G VDLV QV +P +A LQR+GR+GH Sbjct: 336 AKEHRFDAEQRLKRGELKLLVATASLELGIDIGDVDLVCQVGSPRGIAPFLQRVGRSGHH 395 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 VGGV KG FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA A Q Sbjct: 396 VGGVPKGRLFPLSRDELVECAALLDCVQRGELDALRIPEAPLDVLAQQIVAEVACAEWQE 455 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 D Y+ RAAP+ L R FD + ML+ + S L + G + R A Sbjct: 456 DALYASFTRAAPYARLARERFDEVMKMLAEGFTSRRGVR-GAYLHRDVVGGTVRGRRNAM 514 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 + A TSGGTIPD Y+VLL +VG ++E+ ES D+ LG S+RI + Sbjct: 515 MTATTSGGTIPDMADYAVLLEPQ-----GIQVGTVNEDFAIESLTGDVFQLGNQSYRIIR 569 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL-------------------- 639 + +V V A G+S +PFW GEG GR EL +G Sbjct: 570 VETGRVRVEDAQGQSPGIPFWLGEGLGRSDELSAAVGRLRARLDGLFADGDRQARTNAAK 629 Query: 640 --------------------HLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIV 679 P A T + + + + + Sbjct: 630 HANVTEAGKTPSRGKSRQAAAETDAPPASPDNAPGGTALAPTESRLAPALRWLVDDLHLS 689 Query: 680 PGSRHLVLE---RCRDEIGD----WRIILHSPY----GRR--VHEPWA----VAIAGRIH 722 P + + + R R +G +++ + G + +H P+ A + Sbjct: 690 PDAARQIADYLARTRAALGALPTQDTLVIERFFDESGGTQLVIHSPYGSRINRAWGLALR 749 Query: 723 AL----WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 + + A+DD I+ + D ++ +A+ + +F Sbjct: 750 KRFCRNFNFELQAAATDDAIILSLSLAHSFALDEVWRYLRSASAEHVLIQALLDAPMFGV 809 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVI 824 R+R A AL +P T G RT QR+++ LL + P P++ Sbjct: 810 RWRWNATTALALPRFTGGRRTAPQLQRMKSDDLLATVFPDQVACLENIVGEREIPHHPLV 869 Query: 825 LETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDA 884 +TL +CL D D L+RR+ G I++ PSP A +L F+ DA Sbjct: 870 DQTLDDCLHDAMDTDGWLALLRRIESGAIELIARDLPAPSPLAAEILNAKPYAFL--DDA 927 Query: 885 PLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDL 944 PL ERR + D LD I V +E L + + + D Sbjct: 928 PLEERRTQAVQSRRWSDPE---TADDLGALDADAIDAVRDEAWPL-----VRDADEMHDA 979 Query: 945 LRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFP-AMISGQERLACMDDA----AR 999 L L + ++ L L +R A G ++ A Sbjct: 980 LLTLACVADDEAHAH-----AGWPERLAELAERRRATKLATPGGAALWVPVERLVCLRAL 1034 Query: 1000 LRDALGVR---LPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEE 1056 DA +P + + + L D+ L +T + +A L A + Sbjct: 1035 HPDARATPALKVPAACAQPW--EADAALVDVIRARLTGFGPLTLDAIAAPLGLPPASIAT 1092 Query: 1057 QLQQLREQGLVMNL------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLE 1110 L L +G VM D W + R+ +++ R PV + R L Sbjct: 1093 ALAALEREGYVMRGRFTPGATTDEWCERHLLARIHRYTVKRLRREIEPVERADFMRFLFH 1152 Query: 1111 RQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSS 1170 Q + P T G D + V+EQL G AS WE +LPAR+ DY++ Sbjct: 1153 WQHLTPDT-------------RGTGRDALAAVVEQLEGYEAAASAWEDALLPARLTDYTA 1199 Query: 1171 EMLDELLATGAVIWSGQKKLGEDDG-------LVALHLQEYAAESFTPAEADQANRSALQ 1223 LDEL +G ++W+ G +V L + +A Q SA Sbjct: 1200 GGLDELCRSGKLVWTRIGAPARAAGTPVKTTPIVLLPRRHLSAWQALRDPDAQPALSARA 1259 Query: 1224 QAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT 1283 + LA GA F + + + L++AL LV G++ +D +A LRAL Sbjct: 1260 TQVRDALAAHGAMFFDALLDEL------HMLPIELEQALGELVSAGLVNADSYAGLRALL 1313 Query: 1284 RSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL--------------Q 1329 + + + S + R RRG + + AGRW+L+ + Sbjct: 1314 KPA--VKRSATYAPRTRRGGALI----------GGMDDAGRWALVQRQAPPDDDAPTPKR 1361 Query: 1330 VEPLNDTERMLALAENMLDRYGIISRQAVIAE-NIPGGFPSMQTLCRSMEDSGRIMRGRF 1388 D + + + +L RYG++ + + E + + + + + +E G I GRF Sbjct: 1362 GPTTTDPDALEHIVWTLLRRYGVVFWRLLEREADWLPSWRELVRVLQRLEARGEIRGGRF 1421 Query: 1389 VEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVP 1448 V G G QFA I LR+L Q ++ V ++ DP N+ G LLP PA Sbjct: 1422 VAGFAGEQFALPEAIPILRELRRQPGDGQY---VCVTGADPLNLAGTLLPGDKVPAL--- 1475 Query: 1449 TRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALR 1497 AG V+ G + L G + +L A R Sbjct: 1476 ---AGNRVLFRDGVPVASLVSG-----TFHYAPDLPPAAREEARLRLAR 1516 >UniRef50_A7H7C5 DEAD/H associated domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H7C5_ANADF Length = 1475 Score = 1110 bits (2872), Expect = 0.0, Method: Composition-based stats. Identities = 472/1564 (30%), Positives = 664/1564 (42%), Gaps = 203/1564 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P RDWF+R F T Q W LV APTGSGKTLAAFL+A+D L +E Sbjct: 3 DAFHPVVRDWFVRRFGDATEPQTPAWREIGARRDVLVSAPTGSGKTLAAFLHAIDALLKE 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G +R++Y+SP++ALG D+ +NLQ PL I G LRV +RT Sbjct: 63 G----LAGELGDRTRVVYVSPLRALGNDISKNLQAPLAEIRAAAHAAGLALPELRVAVRT 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GDTPA R KL PP IL+TTPESLYL+LT R +L VETVI+DE+HA+AG KRGA Sbjct: 119 GDTPAAARRKLLLRPPHILVTTPESLYLLLTCDSGRASLGDVETVIVDEIHALAGDKRGA 178 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 HLALSLERL+AL QRIGLSATV +++A FL G V R +V Sbjct: 179 HLALSLERLEALARRRPQRIGLSATVDPVAEMARFLVGAERVD------RRGNARCAIVE 232 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 V ++ + +W + + + HRST+VF +R LAE+ Sbjct: 233 VGRRRRFDVAIEVPRDELSSVASKELWAESYDRVAELIRAHRSTLVFVGTRRLAERAAHA 292 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L E +HHGS+S+E+R TE+ L Sbjct: 293 LAERLGD-------------------------------GAVAAHHGSLSRERRLATEERL 321 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G LR VVAT+SLELGID+G VD+V+Q+ +P ++++G+QRIGRA H GG KG FP Sbjct: 322 KAGALRAVVATASLELGIDVGEVDVVVQLGSPGAISTGVQRIGRAAHVRGGTPKGRLFPM 381 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 +R +LV+ A V + RLE + P PLDVLAQQ VA A ++ D Y+ RRA P Sbjct: 382 SRDELVECAAFVRGLRRARLEPVAPRDAPLDVLAQQLVAEATCGSIHEDRLYALARRAWP 441 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++ LPR FDA ++ML+ + L + G + AR GA++ A+T GGTIPD Sbjct: 442 YRALPRADFDAVVEMLAEGI-ATTPGRTTALLHRDGVNGRVKARRGARIAALTGGGTIPD 500 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ +G++DE+ ES D+ LG TSW I+++ V V A Sbjct: 501 TAQYAVVAEPE-----GVTIGQVDEDFAVESLAGDVFLLGTTSWMIRRVEAGIVRVEDAH 555 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD-----GAFFSGTIPPWLAEENTIANIQ 666 G +PFW E GR A L + L A + + E + Sbjct: 556 GAPPGVPFWNAEAPGRSAALSAEVSALRAELEPRLADPPAAIAWLVAEAALPEAGARQVV 615 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 + R A G +P LV ER DE G +++LH+P+G R + + +A+ R + Sbjct: 616 DYLAAGRAALGALPTQDTLVAERFFDEAGGMQLVLHAPFGARTNRAFGLALRKRFCRTFD 675 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 + A+DDG++ + + P L +++ +AV + +F R+R A R Sbjct: 676 FELQAAATDDGVLLSLGPQHAFPLETIFSYVTPATLDEVLEQAVLQAPMFGVRWRWNATR 735 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFPVILETLREC 831 AL +P G R P R+RA LL PD P++ ETLR+C Sbjct: 736 ALAIPRLFRGKRMPPPIARMRAEDLLAAVFPAQVACQDNAPGGPLEVPDHPLVRETLRDC 795 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L + D L L+ R+ GE+++ V T PSP + LL + Y DAPL ERRA Sbjct: 796 LTEAMDAAGLRALLERIAAGEVRLLAVDTPEPSPLSHELL--NARPWAYLDDAPLEERRA 853 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 +++ L + LDP I +V E++ + + + D L +LG + Sbjct: 854 RAVAVRRALPA---AEASGIGALDPAAIAEVAEQVW-----PAPRDADEVHDALLDLGVL 905 Query: 952 TVEDLA---------------QRHTGSSEEVASYLENLLAVK------------------ 978 + A R T E + + Sbjct: 906 PLTAAAGWEGWLGELEVAGRAARMTVGEARWWVAAERVGTARGAAVELGGATPTPTPAGS 965 Query: 979 ------------------------------RIFPAMISGQERLACMDDAARLRDALGVRL 1008 I G R ++ A A+ Sbjct: 966 PEAGHPERSDAATAAARSRRAPTPTPTPSTPALAGRIEGSARPEPVEARAGAAGAIFA-- 1023 Query: 1009 PESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVM 1068 P P + + ++ TA LA L + L +L +GLV+ Sbjct: 1024 PPLSPLPSERIPDDAVLAVVRGWVTHLGPTTARDLAGRIGLPESAAASALLRLEAEGLVL 1083 Query: 1069 NL----------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPAT 1118 + W V R+ +L R PV+ + R L Q V P T Sbjct: 1084 RGTFLPDAPWSAEAPHWCERSVLARIHRLTLGRLRREIEPVSTAVFLRFLARWQHVAPGT 1143 Query: 1119 DGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLA 1178 G G+ V+ QL G A WE +LPARV Y +LD Sbjct: 1144 -------------RLHGAHGLAEVLGQLQGFHAAAGAWERDLLPARVGGYEPALLDAACL 1190 Query: 1179 TGAVIWSGQKKLGEDDG------------LVALHLQEYAAESFTPAEADQANRSALQQAI 1226 +G V W DG V L L+E + + A+ Sbjct: 1191 SGEVAWGRLHVAPPQDGSPRRKGAPTRSAPVTLALREDLPWLLEAIAPEPPPLGEIATAL 1250 Query: 1227 VAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSS 1286 V VLA GA F +++ + GE+ +EALW LV G++T D +A LRAL Sbjct: 1251 VEVLARRGASFLAELAPAVGAPPGET------EEALWELVSAGLVTCDGFAGLRALIAPP 1304 Query: 1287 SNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENM 1346 R + GR + + A S + L+ LA Sbjct: 1305 PRGRVI---RPGSAGGRWALLRAPGAIERAASGESA--TSSVSQPTLD------HLAHQY 1353 Query: 1347 LDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRL 1406 L RYG++ R + E P + + + RS+E G + GRFV G G QFA +D L Sbjct: 1354 LRRYGVVFRDLLAREPRPPPWRDLVRVYRSLEARGELRGGRFVVGFSGEQFALPEAVDAL 1413 Query: 1407 RDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLY 1466 R H + LSA+DP N+ G L P P PA G+ +V+ GG Sbjct: 1414 RAARRAGDG--HAERLDLSASDPLNLAGILTPGPRIPA------VPGSRLVLEGGVPAAT 1465 Query: 1467 LAQG 1470 A G Sbjct: 1466 PAPG 1469 >UniRef50_C6CYT0 DEAD/DEAH box helicase domain protein n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CYT0_PAESJ Length = 1470 Score = 1110 bits (2871), Expect = 0.0, Method: Composition-based stats. Identities = 469/1557 (30%), Positives = 724/1557 (46%), Gaps = 139/1557 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P+ DWF +F +PT VQ Q W ++ L+ APTGSGKTLAA L LD + R Sbjct: 9 FHPSLADWFEASFGEPTDVQKQAWKAITAGDNTLIAAPTGSGKTLAAVLPCLDGIAR--- 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 ++ ++ R+LYI+P+KAL D+ +L ++ I + LR G+RTGD Sbjct: 66 --MKQQQRQAGVRLLYITPLKALNNDIHDHLVAFIEQIDKLAASSDTSWPGLRSGVRTGD 123 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T + RS + R PPDIL+TTPES+Y++LTS + RE L+ V IIDE+H +A KRG+HL Sbjct: 124 TTSSVRSAMYRKPPDILVTTPESMYILLTSEKGREMLKTVSYAIIDEIHDLAADKRGSHL 183 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH---------- 243 ++SLERL+ L QRIG+SAT + + VA FLGG + + Sbjct: 184 SVSLERLEELCGRRIQRIGVSATQKPLARVARFLGGWQEPAGSQADERQETDSEGFVHPL 243 Query: 244 ---PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P+ +V + + + ++W I + + RS I+F N Sbjct: 244 GLVPRPVTIVESHMSKKLEVSLTMPDQSQPMQTREAVWLPILDRLFALMSDCRSVIIFVN 303 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 SR L E+L RLN+ + R +HHGS++ Sbjct: 304 SRRLCERLCLRLNDHAGYEMAR-------------------------------AHHGSIA 332 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 KE+R E+ LK+GELRC+VATSSLELGID+G ++LVIQ+ +P+ ASG+QRIGRAGH V Sbjct: 333 KERRLEVERMLKAGELRCIVATSSLELGIDVGHIELVIQLDSPIEAASGIQRIGRAGHAV 392 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 G S+G R R L + AV+ + + +E + P + LDVL+QQT++ A + V Sbjct: 393 GSASRGAMVARQRGVLPEMAVLGKLIAERDIEPIQIPRDRLDVLSQQTISIVASQDMAVS 452 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + + + R+ ++ P L +L+G YP RP L WNR+T +L R + Sbjct: 453 DLHRLIARSDSYRSFPAGKLRGMLQVLAGFYP-----FMRPLLDWNRDTDLLVKRRNTMI 507 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 A+T GTIP Y V + +GELDEE V ESRV D+ LG W I++I Sbjct: 508 GALTGAGTIPSSSAYPVHHVDSRVH-----LGELDEEFVQESRVGDVFQLGMNGWMIRRI 562 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG-------AFFSGTIP 653 +D+V V+ A R + +PFWR EG GR LG+ +G F+ + + Sbjct: 563 DKDRVYVSEASNRFSEIPFWRAEGLGRTYSLGKKVGAFIGEIEERLQREDEDKLIGWLTG 622 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 + ++ T + LI Q + +P + +V+E RD + +I+H+P+GRR++ W Sbjct: 623 QYQMDDYTAQQLLSLIGSQLSNCE-LPTDKRIVIETYRDLMNQTHVIMHNPFGRRLNRTW 681 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 +AI + L A D+GI +P+ D P + ++ EA+ S Sbjct: 682 LLAIERQFELLLPYRLYGNAKDNGIEFVLPEWDSSWLQTIWG-VTPANVEPLLTEAITGS 740 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECL 832 L A FR A +LL+ RTPLWQ+RLR+ +LL A Y FP ++E ++ CL Sbjct: 741 PLLAIAFRHIAETSLLLSRSFS--RTPLWQKRLRSEELLRSALPYAEHFPYLMEAMKACL 798 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 + L L L+ + GEI++ T PSP AT L YV +Y+ D + Sbjct: 799 HEYLSLDDLRALLTAIQEGEIEVLVKETEYPSPMATQFLADYVNMRIYEGDGLDPAIQMQ 858 Query: 893 VLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMT 952 ++++ EL L G+ + QV+ + L P + + LL+ G + Sbjct: 859 LMNVSKELAGRLFGEAAIRSAIPEQVLDAERQRLS--EPELELRESSDVIRLLKRRGDLA 916 Query: 953 VEDLAQRHTGSSEEVAS--YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPE 1010 +L Q + E A LAV R + R C D+ + E Sbjct: 917 PGELIQLSDTRALEWAEQLLQTGELAVYRPSQDTPEEEHRWICRDE---------REIYE 967 Query: 1011 SLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFS-LGIAIVEEQLQQLREQGLV-- 1067 +LPE + R+ T +L + L +A + + +LRE+G + Sbjct: 968 ALPES-----DEAASFIIRRFAENRIAFTELELCERYPKLSLAEAKRLIDKLREEGSLEQ 1022 Query: 1068 ----MNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPA 1123 ++ ++ IW S R+ S+ AR+ +P + + + RQ L Sbjct: 1023 APFAVSPEERIWSSRRAAERMIRLSIGEARKQVQPASPIRWCAQIALRQHALQGAQ---- 1078 Query: 1124 LFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVI 1183 G +G+ VIE+L G+ LP S WES I P+RV DY + LD L A G VI Sbjct: 1079 ---------LRGSEGLKLVIERLQGIFLPLSHWESVIFPSRVTDYRKDELDLLCAAGEVI 1129 Query: 1184 WSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQ 1243 W G+K+ E +G VA L + + P A+ +S ++ +L GA F ++++ Sbjct: 1130 WIGKKQPDEKEGKVAFFLA-GSRSIYEPYLAESREKSVSHPELLELLKRSGASFLTRLAR 1188 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALT--RSSSNARTSTRRSHRARR 1301 + + AL LVW+G ++D +APLR LT + A+T + Sbjct: 1189 ETGK------LPTEVLSALLELVWEGHASNDQFAPLRLLTLKKGKDWAKTGSGLGRWYWT 1242 Query: 1302 GRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAE 1361 G P S+ +P+ + E + ++LD YGI++++ + A Sbjct: 1243 GSLADVLPDEGSSSHTSPD------------TDPPE--MYWVRHLLDTYGIVTKE-LTAS 1287 Query: 1362 NIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTP 1421 P + +Q + R +E+ G + RG F++G QF + +R T T Sbjct: 1288 VTPYSWDRLQPVLRKLEEWGTLTRGLFIDGAITMQFTTPEVAELIRKPFPSGTPANE-TL 1346 Query: 1422 VALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE 1481 LSA DPAN +G L+ WP R+ G +V+ G + L ++ GK++ + +E Sbjct: 1347 TLLSAVDPANPFGLLMEWPE-GFDCSFARKPGHFLVIRGDQWLYWMENNGKRIHTMEPRE 1405 Query: 1482 ELLAP---EVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGL 1535 P E+ T LRR+ + + N V T LL+E G S + L Sbjct: 1406 FAKQPSAEELKWIFMTLLRRQHLSKIVVERWNGETVALTDEGKLLKEIGAESDQKSL 1462 >UniRef50_B1FTZ8 DEAD/H associated domain protein n=2 Tax=Burkholderia RepID=B1FTZ8_9BURK Length = 1553 Score = 1106 bits (2861), Expect = 0.0, Method: Composition-based stats. Identities = 460/1627 (28%), Positives = 671/1627 (41%), Gaps = 246/1627 (15%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA WFL+ F PT Q W R LV APTGSGKTL AFL ALD L ++G Sbjct: 29 FHPAVAGWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQGL 88 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP+KAL D++ NLQIPL+GIA E RG +++R +RTGD Sbjct: 89 AN--HGALPDETLVVYVSPLKALSNDIRLNLQIPLQGIAAELDARGLPPLDIRTAVRTGD 146 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T QER+ L + P IL+TTPESLY++L S R L V TVI+DE+HA+AGSKRG+HL Sbjct: 147 TTQQERNALRKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGSKRGSHL 206 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 ALSLERLDAL RIGLSAT + S VA FL G + P ++ V Sbjct: 207 ALSLERLDALCGRRLPRIGLSATQKPVSAVARFLVGGASIDSDVPAD------CAIIDVG 260 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 ++ A +W + + + V HR+T++F N+R +AE+ L Sbjct: 261 HIRARDLALEIPPVPLEAVMPNEVWERVYDRLAELVALHRTTLIFVNTRRMAERAARHLT 320 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E +HHGS++KE R EQ LK Sbjct: 321 ERLGKEA-------------------------------VAAHHGSLAKEHRFDAEQRLKR 349 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GELR ++AT+SLELGID+G VDLV Q+ +P ++A LQR+GR+GHQVGG+ KG FP +R Sbjct: 350 GELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHQVGGMPKGRLFPTSR 409 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 DL++ A +++C+ G L+ L P PLDVLAQQ VA + D + +RRAAP+ Sbjct: 410 DDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWSEDALFDLMRRAAPYA 469 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L R +DA L ML+ Y S + L + +G L R G +L+AVTSGGTIP+ Sbjct: 470 ELTREQYDAVLRMLAEGYTSRNGPR-AAYLHRDVVSGTLRGRRGGKLVAVTSGGTIPENA 528 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 Y+V+L VG ++E+ ES D+ LG S+RI +I +V V A G+ Sbjct: 529 DYAVVLEPQAIN-----VGTVNEDFAVESLAGDVFQLGNASYRILRIESGRVRVEDAQGQ 583 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANI-------- 665 +PFW GE GR EL + + + A Sbjct: 584 PPNIPFWLGEAPGRSDELSLGVARLREQIGRLLEADEPTAAAALLDADEAATASAAPLIA 643 Query: 666 -----QGLIEEQRNATGIVPGS-----------------------------RHLVLERCR 691 + ++ +R G P L+ E Sbjct: 644 QSPKTRARLQSKRATNGESPAEAKQAKQPTEVTLATQPRNDPMSARLERAIDWLIAELGL 703 Query: 692 DEIGDWRIILHSPYGRRV------HEPWAV------------------------AIAGRI 721 DE +I+ + R H+ + A + Sbjct: 704 DEAAARQIVDYLARARAALGVLPTHDTLVMERFFDESGGTQLVIHAPFGSRVNRAWGLAL 763 Query: 722 HALW----GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 + + A++D IV + + + D ++ +A+ + LF Sbjct: 764 RKRFCRQFNFELQAAATEDAIVLSLTGSHSFVLDEVWRYLHSASAEHLLIQALLDAPLFG 823 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPV 823 R+R A AL +P T G +T QR+R+ LL + P P+ Sbjct: 824 VRWRWNATTALGLPRYTGGRKTAPQLQRMRSEDLLTSVFPEQAACLENVVGERELPRHPL 883 Query: 824 ILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD 883 + +T+ +CL D D L+RR+ G++++ PSP A +L + Y D Sbjct: 884 VDQTVDDCLHDAMDSERWIALLRRIESGDVRLVARDLPAPSPLAAEIL--NAKPYAYLDD 941 Query: 884 APLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFD 943 AP+ ERR + + D LDP I V +E +A+ + + + Sbjct: 942 APIEERRTQAVLNRRWTDPS---SADDLGALDPDAIASVRDEAW-----PQARSVDEMHE 993 Query: 944 LLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPA----------MISGQERLAC 993 L L +T + +E +LE+L R + ERL C Sbjct: 994 ALTGLACITEAEA-----RGNEGWPQWLESLAQSGRATRLQIAADAADAALWLPAERLTC 1048 Query: 994 MDDAARLRDALGVRLPESLPE--IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGI 1051 D P + P+ L D+ L + A +A L Sbjct: 1049 FAALYPEPDGPRFAPPLTAPKGYADEWSADDALVDVLRARLTGFGPLPAAAIADTLRLPQ 1108 Query: 1052 AIVEEQLQQLREQGLVMNL------------QQDIWVSDEVFRRLRLRSLQAAREATRPV 1099 VE+ L +L +G VM D W + R+ +++ R PV Sbjct: 1109 TSVEQALIRLEAEGYVMRGRFTPQALQAPDAPGDEWCERHLLARIHRYTVKRLRREIEPV 1168 Query: 1100 AATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQ 1159 + R L E Q + P T EG D + V+EQL G AS WE Sbjct: 1169 ERHDFMRFLFEWQHLTPDT-------------RSEGRDALAAVLEQLEGFEAAASAWEED 1215 Query: 1160 ILPARVRDYSSEMLDELLATGAVIWSG-------QKKLGEDDGLVALHLQEYAAESFTPA 1212 ILPARV+ Y++ LDEL G ++W+ +V L + S Sbjct: 1216 ILPARVKAYTNTSLDELCRAGKIVWTRLTERSRSAAGPVRGTPIVLLPRPQVRVWSALID 1275 Query: 1213 EADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVIT 1272 A Q S QA+ L+ GA F ++ +R V L+ AL LV G++ Sbjct: 1276 PARQPELSPRAQAVHDALSQHGAMFFDELLHELR------VLRIELENALGELVAAGLVN 1329 Query: 1273 SDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLL---- 1328 SD +A LRAL + ++ R ++ V + AGRW+L+ Sbjct: 1330 SDSFAGLRALLKPAAK------------RNAYSGSRRVRSTALIGGMDDAGRWALVNRPV 1377 Query: 1329 ----------------QVEPLNDTERMLALAENMLDRYGIISRQAVIAE-NIPGGFPSMQ 1371 Q E + +A +L RYG++ + + E + + + Sbjct: 1378 PAAVSANETPPQSLQSQRRRTLPPEIVEHVAMTLLRRYGVVFWRLLEREADWLPPWRDLL 1437 Query: 1372 TLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPAN 1431 + + +E G I GRFV GL G QFA I LR++ A V + DP N Sbjct: 1438 RVYQRLEARGVIRGGRFVNGLAGEQFALPEAIPLLREVRRHANDGA---FVCVGGTDPLN 1494 Query: 1432 VWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHA 1491 + G LL PA G V+ G ++ L G + E E A Sbjct: 1495 LAGTLLVGERVPA------VGGNRVLYRDGVVVATLVAGA---FWFDASLEASPAERERA 1545 Query: 1492 LTTALRR 1498 + RR Sbjct: 1546 RSWLTRR 1552 >UniRef50_D2NPL8 Lhr-like helicase n=2 Tax=Rothia mucilaginosa RepID=D2NPL8_9MICC Length = 1920 Score = 1101 bits (2849), Expect = 0.0, Method: Composition-based stats. Identities = 580/1525 (38%), Positives = 795/1525 (52%), Gaps = 242/1525 (15%) Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREG-SIWPYIETGILDEVLRHRSTIVFTNSR 302 P+ + +P + + + + + R SIWP ++ I+D + +RSTIVF NSR Sbjct: 401 PKNTLTIPEEALLEGALHEKALRDTPDSERPETSIWPRVQERIVDHIENNRSTIVFVNSR 460 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 GLAEKLTA LN+++ R+ +I+ + A + R+HHGSVSKE Sbjct: 461 GLAEKLTAALNDIHLRRVLAKQAISPEDYAAGICDIAEVPPLA-------RAHHGSVSKE 513 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 QR + E+ALK G LRCVVATSSLELGIDMG VDLVIQVA P SVAS LQR+GRAGH+VG Sbjct: 514 QRTLIEEALKGGTLRCVVATSSLELGIDMGHVDLVIQVAAPPSVASALQRVGRAGHRVGE 573 Query: 423 VSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 +S+G F+P+ R DL+ + V + M +G LE L P NPLDVLAQQTVAA A+ + VD W Sbjct: 574 ISRGFFYPKHRGDLLGATVTLAGMRSGTLEPLAIPTNPLDVLAQQTVAACALGPISVDSW 633 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR------ETGILTARP 536 Y +RR+AP+ +LPR +FD+ L+ML+GRYPS +F+ RP+++W+R +G + RP Sbjct: 634 YEALRRSAPYAELPRALFDSVLEMLAGRYPSDEFAELRPRIIWDRTPTEEAPSGSIEGRP 693 Query: 537 GAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWR 596 GAQ LAVTSGGTIPDRG++ V L +E+ G +RVGELDEEMVYESR ++ITLGA+SWR Sbjct: 694 GAQRLAVTSGGTIPDRGLFPVYLVSSDEERGPKRVGELDEEMVYESRAGEVITLGASSWR 753 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA-----DGAFFSGT 651 I++IT D V V+PAPG+ ARLPFW G+ GRP LG G F L+ D Sbjct: 754 IEEITHDAVRVSPAPGQPARLPFWHGDRMGRPYALGVQTGAFTRALSSLDATDSTAARQQ 813 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 + + + N+ + EQR +TG VP +++ER RDE+GDWR++LHSP G VH Sbjct: 814 LEQLGLDTWAVDNLLAYLREQRESTGAVPSDTRMIVERHRDELGDWRVVLHSPLGYGVHA 873 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVG 771 PWA+A+ RI +G DASV+ASDDG++ R+P + P A +FLF+P++L IV E VG Sbjct: 874 PWALAVRARIEERYGVDASVMASDDGLILRLPAMEDVPPGADLFLFDPDELEAIVTERVG 933 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 SALFA+RFRE AARALL+P R PG RTPLWQQR RA+QLL++A+ YPDFPV+LET REC Sbjct: 934 DSALFASRFRENAARALLLPRRDPGKRTPLWQQRQRAAQLLDVARKYPDFPVLLETAREC 993 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 LQDVYD+PAL ++ R L + + +V T PSPFA +LLF YVAE +Y DAP AERRA Sbjct: 994 LQDVYDVPALVQVHRSLQSRAVSMLEVETNEPSPFARTLLFEYVAEHLYDGDAPAAERRA 1053 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 + LSLD LL LLG +LLDP V+ Q ++ LQR RA G EG+ DLLR+LGP+ Sbjct: 1054 AALSLDPALLAELLGSSGLRDLLDPAVLVQTQQRLQRTGERYRACGVEGVADLLRQLGPL 1113 Query: 952 TVEDLAQRHTGSS------------------------------EEVASYLENLLAVKRIF 981 + +L+ R + E+ E L+ +R F Sbjct: 1114 SARELSLRLRSDNPPTEAPGIEHEDSENYGEEYGEEYGAHASVEQARELAEQLVRSRRAF 1173 Query: 982 PAMISG------QERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAH 1035 M + Q A ++DAARLRD LG+ +LP L V+ PL DL RY R H Sbjct: 1174 SFMGAADGSTEPQLYYAAVEDAARLRDGLGIMPAAALPAALLESVAEPLEDLVSRYARTH 1233 Query: 1036 ALVTAEQLAHEF----SLGIAIVEEQLQQLREQGLVMNLQ------------QDIWVSDE 1079 TA+Q A F +G+ ++ LQ+L++Q + + + WV + Sbjct: 1234 IPFTAQQAAEHFSRLTPVGVGVLTPVLQRLQQQRRLSSGEFLPEVLRASGAVGVEWVDTQ 1293 Query: 1080 VFRRLRLRSLQAAREATRPVAATTYARLLLERQGV----------LPATDGSPALFASTS 1129 V R +R RSL A RE PV+ Y L Q V LP A S Sbjct: 1294 VLRTIRARSLAALREEIEPVSVQVYGVFLPSWQNVRSLSVRIAQTLPEASAYGAFIPSRR 1353 Query: 1130 PGVYEGV-----------------------------DGVMRVIEQLAGVGLPASLWESQI 1160 G + ++ I+QLAGV +PAS E+ I Sbjct: 1354 AATVVGERVAPLGSASFNPTAENGTTHASQDSTSATEDLLTAIDQLAGVRVPASALETLI 1413 Query: 1161 LPARVRDYSSEMLDELLATGAVIWSGQKKLGE-----DDGLVALHLQEYAAESFTPAEAD 1215 LPARV Y MLDEL+A+G V ++G +LG DG + LHL E ++ + + Sbjct: 1414 LPARVPGYQPHMLDELMASGRVFFTGAGQLGGGSAQKSDGWIRLHLSESSSLTLGEDYPE 1473 Query: 1216 QANRSA-------------LQQAIVAVLADGGAWFAQQISQRIRDKIGES---------V 1253 Q R+ L+ AI LA GG F + +R+ + + Sbjct: 1474 QLVRAENPELWEALQTPGTLEHAIYEALAHGG-LFVPALRERVTQLMSAAAPAGQVVTFP 1532 Query: 1254 DLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHR--------------- 1298 D + + ALW LVW G +T+D +AP+RA+ +A + R Sbjct: 1533 DAAEVSAALWRLVWSGAVTNDSFAPVRAMLAGVRSAHPTPAAPARLSRVGRRGAGRIAAA 1592 Query: 1299 ---------------------------ARRGRPVYAQPVSPRVSYNTPNLA----GRWSL 1327 R R + + + P +A GR+S Sbjct: 1593 RASMGNAMAGGYGTDGYSSGSYSAPAAGRGLRSLRGHSLRGGLHAAAPAVAPQDSGRFSR 1652 Query: 1328 LQ---VEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIM 1384 + EP+ T LA A+ +LDRYG+++R + E+ GGF + + + ED + Sbjct: 1653 VDTLLQEPVEATVAALARADLLLDRYGVLTRGCLQVEDSAGGFSQLYRIYSAAEDRALVR 1712 Query: 1385 RGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYT----------------------PV 1422 RG F+EGLG AQFA T+D LR A + Sbjct: 1713 RGYFIEGLGAAQFAAPATVDLLRSTADNLSVPASPQGFGASAYTPQRTDTEQVYGTFTVT 1772 Query: 1423 ALSANDPANVWGNLLPWPAHPAT---------LVPTRRAGALVVVSGGKLLLYLAQGGKK 1473 L+A DPAN +G L WPA P+ P R+AGA VV+ G +LY+ +G K Sbjct: 1773 LLAATDPANPYGAALSWPAIPSFAHEGAGTVKHRPARKAGACVVLVDGAPVLYVERGAKT 1832 Query: 1474 MLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDL------------------PVR 1515 +L + +L AL + + ++ +VND+ V Sbjct: 1833 LLAFTTDP-VLLEAAAPALARLVSAGGAEKISVEKVNDVELLGTHTLNTSAQGAATGEVT 1891 Query: 1516 QTPMFTLLREA----GFSSSPQGLD 1536 + P+ LR A GF ++ +GL Sbjct: 1892 EHPV-EALRAALQMQGFYATVRGLS 1915 Score = 257 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 137/247 (55%), Positives = 166/247 (67%), Gaps = 6/247 (2%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 FS RDWF F PTA Q W + L+IAPTGSGKTLAAFL++LD L RE Sbjct: 69 FSTPVRDWFRATFSAPTAAQEGAWESIRNGNNTLIIAPTGSGKTLAAFLWSLDALHREHE 128 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 T +RILYISP+KALG DV+RNL+ PL GI E ++ VG+R+GD Sbjct: 129 AGTAG-----GTRILYISPLKALGADVERNLRAPLAGITRLSGNNTG-EPSISVGVRSGD 182 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TPA+ER +L NPPDILITTPESLYLMLTS AR TL GV TVI+DE+H +A +KRGAHLA Sbjct: 183 TPARERRQLISNPPDILITTPESLYLMLTSAARNTLAGVTTVIVDEIHNLAATKRGAHLA 242 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 +SLERLDALL AQRIGLSATV + VA FLGG +PV +++ P + +R+ VPV + Sbjct: 243 VSLERLDALLAKPAQRIGLSATVENPEAVARFLGGIQPVKIMSRPVAKEWDLRLSVPVPD 302 Query: 255 MDDVSSV 261 M + Sbjct: 303 MAALGGA 309 >UniRef50_B5JLM6 DEAD/H associated family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLM6_9BACT Length = 1415 Score = 1085 bits (2806), Expect = 0.0, Method: Composition-based stats. Identities = 447/1530 (29%), Positives = 698/1530 (45%), Gaps = 165/1530 (10%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTRE 79 WF F +PT +Q + W + A EH L+ A TGSGKTLA+FL+A+ +L E Sbjct: 2 AKWFEERFGRPTEIQEEAWKLIATGEHCLISAATGSGKTLASFLWAISQLASGAWELG-- 59 Query: 80 AHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 +R+LY+SP+KAL D++RNL PL + R G ++RV R+GDT + Sbjct: 60 -----QTRVLYVSPLKALNNDIRRNLLGPLAELEALFREEGVAWPDIRVMTRSGDTEQSD 114 Query: 140 RSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSLE 198 R K+ R+PP+ILITTPESL L+LTS+ + L G+ +VIIDEVH++ GSKRG +L +E Sbjct: 115 RRKMLRHPPEILITTPESLNLLLTSKDGQRALLGIRSVIIDEVHSIVGSKRGVYLMTGVE 174 Query: 199 RLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRIVVPVA 253 L L QR+ LSATVR VAA++GG R V++ A + +I + P Sbjct: 175 HLARLNG-EFQRVALSATVRPMELVAAYVGGFSNGKPRRVSLAQSSATKRYEIEVRFP-- 231 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + + G + W I + + ++ ST++F NSR L EKL ++N Sbjct: 232 ------------ADSNEQGDDDDFWHPIVRDLKALIAKNNSTLIFVNSRKLCEKLAYKIN 279 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 IA SHHGS+SKE R EQ LK+ Sbjct: 280 -------------------------------FEEADPIAYSHHGSLSKEFRFAVEQRLKN 308 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 GEL+ +VAT+SLE+GID+G++D V+ V P V+S +Q++GRAGHQVG VS+ + FP Sbjct: 309 GELKAIVATNSLEMGIDVGSLDCVVMVQCPGVVSSAVQKVGRAGHQVGAVSRAVVFPSYS 368 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 RD ++SAV+ + + +E + P PLDVLAQ V+ +DE +S+++ A P++ Sbjct: 369 RDFLESAVLSKAIQDRDIEAVRPVEAPLDVLAQVIVSILGTGPWDIDELFSQIKCAYPYR 428 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L R VFD ++M +GRY + ++ +R T R GA + SGG IPDRG Sbjct: 429 ELSREVFDLVINMQAGRYAGSRLRELKARIAIDRAENTATLRKGALMAFYFSGGVIPDRG 488 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 + + R+GELDEE V+E + D+ TLG SW+I QIT + V+V+PA Sbjct: 489 YFHLR-----HSGNGSRIGELDEEFVWERAIGDVFTLGVQSWKIDQITYNDVLVSPAASG 543 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIANIQGLI 669 PFW+ E R IG+FL L D F + +E + + Sbjct: 544 EVAPPFWKAETFDRDFHYSNRIGEFLEWANERLNDAGFVGELQERFRMDEVASKALLDFL 603 Query: 670 EEQRNATGI-VPGSRHLVLERCRDEIGDW---RIILHSPYGRRVHEPWAVAIAGRIHALW 725 +QR TG +P H++ E G +++LH+ +G RV+ P+A+A+ + + Sbjct: 604 RQQRLVTGQDLPHRHHILAEIIDAAPGGAPGQQLVLHTHWGGRVNRPFALALDAAWNEAF 663 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 G V ++D +V + + I L + + +R + S F ARFRE A Sbjct: 664 GHRTEVYVNNDCVVVVLSCEVSI--EEVIGLVSLQNVDTFLRSRLEGSGFFGARFREAAG 721 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 +LL+ G R PLW R+RA +L E Q Y DFP++LE R CL+D +D+ +L ++ Sbjct: 722 TSLLVTRNKAGQRLPLWLSRMRAKKLFESVQRYDDFPLLLEAWRSCLKDEFDMESLRLVL 781 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVA-EFMYQSDAPLAERRASVLSLDSELLRNL 904 L G+I +S + SPFA+S+ + + E+MY +D+P + ++ +L +L+ + Sbjct: 782 GELEQGDIAVSISRGSKASPFASSVAWRQINEEYMYATDSPGSAGKS---NLREDLVSTV 838 Query: 905 LGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSS 964 +D ++IR EE+ QRLA G L + LR+ R Sbjct: 839 AFDAANRPRVDVELIRAFEEKRQRLAEGYAPGDALELKEWLRD-----------RIVIEK 887 Query: 965 EEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPL 1024 + E + + +++ A+ +D L P+ Sbjct: 888 SVWERFRELVEG-----EVSVEASGEWVYLEEEAKRKDLLFCPSPD-------------- 928 Query: 1025 RDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDI------WVSD 1078 +L + +L + V+ E++ + +++ + L + +++ Sbjct: 929 PELLIEFLSYYGAVSVERIRNWLGCDASVLTALIDTLEDDRRLVSGTLIEGDDSLCVCEA 988 Query: 1079 EVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDG 1138 E F L R + P+ L + QG+ GVDG Sbjct: 989 ENFEILLRMRRARGRPSFEPLPLEKLGLFLAQWQGLAKERV---------------GVDG 1033 Query: 1139 VMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVA 1198 V +++L G WE +L ARV DY + +LD +L W G + V Sbjct: 1034 VREALDRLLGWTERIEDWERSLLAARVSDYGANLLDAVLLEDGSFWYG-----TSEARVG 1088 Query: 1199 LHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSAL 1258 L E ++ + L ++I+ VL GG + ++ + + S L Sbjct: 1089 FCLPEDWDLIG---DSGNVLLAELGESIIQVLDTGGKYSFLKLIELLG------CRSSDL 1139 Query: 1259 QEALWALVWQGVITSDIWAPLR-------ALTRSSSNARTSTRRSHRARRGRPVYAQPVS 1311 +EALW LVWQG +++D +A R L S SN S+R RR R Sbjct: 1140 EEALWQLVWQGRVSNDAFASARRGAAGKFQLCASESNRVPSSRAIRMGRRARASR-TVSY 1198 Query: 1312 PRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQ 1371 P Y P L ++ V A +LDRYG++ R+ ++ E + + Sbjct: 1199 PGSWYALPELDVESDVVAVLEAEKE-----RARIVLDRYGVVFRELLLREEEGFRWKDVF 1253 Query: 1372 TLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPAN 1431 R +E SG I+ GRF EG+ G QF + + LR LSA DPA+ Sbjct: 1254 RAFRLLELSGEIVGGRFFEGIQGLQFVSKEALRGLRK------PLPEKAIYWLSATDPAS 1307 Query: 1432 VWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHA 1491 + G + ++P R +V G +L+ +GGK + E + P+V Sbjct: 1308 LCGLGV---DELKGVLPKRVGSNRLVYRGSELVCESQRGGKALAFHVEAGDADLPQVIST 1364 Query: 1492 LTTALRREPRLRFTLTEVNDLPVRQTPMFT 1521 L AL + + +N R + Sbjct: 1365 LADALGLGAMAQLKIETINGEDARCSAYLE 1394 >UniRef50_D0WMV8 Putative DEAD/DEAH box helicase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMV8_9ACTO Length = 1780 Score = 1077 bits (2785), Expect = 0.0, Method: Composition-based stats. Identities = 642/1614 (39%), Positives = 827/1614 (51%), Gaps = 228/1614 (14%) Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAG 186 VG+RTGDTPA+ER +L NPPDILITTPESLYLMLTS AR+TL V TVI+DE+H++AG Sbjct: 190 SVGMRTGDTPAKERRRLRVNPPDILITTPESLYLMLTSEARKTLGAVSTVIVDEIHSLAG 249 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 SKRG HLALSLERLD LL AQRIGLSATV A VA FLGG RPVT+V + P + Sbjct: 250 SKRGTHLALSLERLDGLLEEPAQRIGLSATVSPARTVADFLGGSRPVTIVEADSAASPDV 309 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + VPVA+M + + S+WP+IE ILD VLRHR+T+VF NSRG E Sbjct: 310 AVSVPVADMAAIPPASVAG------QMVVSMWPHIERAILDHVLRHRTTVVFVNSRGACE 363 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQ--------------------- 345 +LTA LNE YA R + A F ++ A + Sbjct: 364 RLTAHLNEEYANRFGGAEGSEAAADRFAGSAAAVGSVKSVEAHRQTQGRPGAGRKGLPAG 423 Query: 346 -------------------SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 IA++HHGSVSKEQR E LKSG LRCVVAT+SLE Sbjct: 424 PGAHRQSWGSGDSNYSTPPPETPVIAKAHHGSVSKEQRLAVENELKSGSLRCVVATASLE 483 Query: 387 LGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM 446 LGIDMG++DLV+QVA P SVASGLQRIGRA H VGG +G +P R LVD+AV E M Sbjct: 484 LGIDMGSIDLVLQVAPPPSVASGLQRIGRANHAVGGRPRGAIYPVERTHLVDAAVAAEGM 543 Query: 447 FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 G +E N LDVLAQQTVAA +++ D W+ VRRAAP+ LPR FD+ L++ Sbjct: 544 RTGAIEETELVANALDVLAQQTVAAVSVEETPADRWFETVRRAAPYAALPRESFDSVLEL 603 Query: 507 LSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA 566 LSG Y S D + F P++VW+RE G+L ARPGAQ LAV+ GTIPDRGM+ V+LPEG E+A Sbjct: 604 LSGAYASADLADFSPRIVWDREAGVLRARPGAQRLAVSFSGTIPDRGMFPVVLPEGAEEA 663 Query: 567 GSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE--- 623 G RRVGELDEEMVYESRV D++TLG +SW+I++I D+V+V GRS+RLPFWRGE Sbjct: 664 GRRRVGELDEEMVYESRVGDVVTLGTSSWQIREIANDRVVVDHVSGRSSRLPFWRGEGPG 723 Query: 624 -----------------------------GNGRPAELGEMIGDFLHLLADGAFFSGTIPP 654 G RPA+ E A F + Sbjct: 724 RAASAGAAKGAFLREAEASLELASSPEAAGGRRPADNPESSASVRSEPHVSASFLSRLES 783 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 +EN N+ L+ EQ+ ATG +P LVLERCRDE G WR +LHSP GRRVHEPWA Sbjct: 784 AGLDENARENLVSLLLEQKAATGAIPSDETLVLERCRDENGSWRFVLHSPMGRRVHEPWA 843 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 +AI RI + + + ASDDGI ++P T G+ P A + +F+ E+L ++V +G +A Sbjct: 844 MAIRERIRRVAKIEPQMFASDDGIAFQLPATVGRPPGAELVVFDAEELRRLVTSRIGGTA 903 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQD 834 LFAARFRECAARALL P PG RTPLW QRLRA QLLE ++ + +FPV +E RECLQD Sbjct: 904 LFAARFRECAARALLTPSSRPGRRTPLWLQRLRAGQLLEASRQFRNFPVSVEAARECLQD 963 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL 894 VYDLPAL LM R+ ++I + T +PSPFA LLFGY F+YQ D P AERRA +L Sbjct: 964 VYDLPALAGLMERVEARSVRIVEAETASPSPFAHPLLFGYTGAFLYQEDLPRAERRAHLL 1023 Query: 895 SLDSELLRNLLGQVDPGELLDPQVI--------------------RQVEEELQRLAP--- 931 SLD E + +L+G G++LD V+ V + L+RL P Sbjct: 1024 SLDPEAIASLVGDGGVGQVLDESVLAEVEAELQRLAPGRRVRRDAEAVADLLRRLGPLTL 1083 Query: 932 -GRRAKGEEGLFDLL--------------------------------RELGPMTVEDLAQ 958 G A+ D P E A+ Sbjct: 1084 EGVAARSVGACDDAPPAQEKGDSAAREDAADAADSSQADEKQPRQESESRFPRVGEGSAR 1143 Query: 959 RH---TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEI 1015 +SE V S LE L +R+ + G+E A +DA LR ALGV +PE E Sbjct: 1144 DGQEEAAASEAVRSLLEELAQSRRVVSVRLGGRECWAGAEDAPALRLALGVDVPEWAAEP 1203 Query: 1016 -----YLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNL 1070 PL DL LR R A +TA A EF +G A E L+ L E G +M + Sbjct: 1204 GGLPCTSAVSRSPLEDLLLRCARTRARITAAAAAAEFGIGRATAAEALESLAESGSLMRI 1263 Query: 1071 QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSP 1130 W+ VF R+R RSL AR A PV RL+LER G+ Sbjct: 1264 DDAHWMEASVFARVRNRSLARARAAIEPVRPAALHRLVLERAGIDRPG------------ 1311 Query: 1131 GVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL 1190 G+D + I + GV LPASLWES + PARV DYS MLDEL+ +G V+W Q + Sbjct: 1312 ---RGIDALAEAISLMEGVWLPASLWESVVFPARVADYSPGMLDELILSGDVLW--QARS 1366 Query: 1191 GEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIG 1250 G + G + ES A+ A+++ + A G F S Sbjct: 1367 GGESGRASSEASRTGKESG--RLANDASQTGGEPAKTGGAPVGEIAFFPTDSPLAPVAGA 1424 Query: 1251 ESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTS------------------ 1292 E LW L +G T+ + P+RA + + A Sbjct: 1425 AVSADDVGWEDLWKLAREGAATALSFEPVRACLQPRAAAPKKRRVTSRRSRRYAAFAAAR 1484 Query: 1293 --TRRSHRARRGRPVYA-QPVSPRVSYNTPN-------------LAGRWSLLQVEPLNDT 1336 + + G P QP + ++ ++P L W L+ ++ Sbjct: 1485 ALSTEAQGIDSGGPAQGTQPGNSQLRQSSPGKCPAGVERLEAAMLQTTWRRLRPPRVSAE 1544 Query: 1337 ERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQ 1396 E +A+ E++LDRYG++SR +A +PGG S+ + R MED+G ++RG FV GLG Q Sbjct: 1545 EAAVAMVESLLDRYGVVSRDIALAAGVPGGMASLTPVLRRMEDAGAVLRGTFVRGLGPVQ 1604 Query: 1397 FAERLTIDRLRDLATQATQTR---------HYTPVALSANDPANVWGNLLPWPAHP---- 1443 +AER T+D LR A + L DPA + G +PWP Sbjct: 1605 YAERGTLDALRSFADSPSDADVRAAGEGDSEPAAAVLDFRDPACLMGRGVPWPDPALPSQ 1664 Query: 1444 -----------ATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHAL 1492 P+RR G+ VV+ G+ LY + K ++ + E AL Sbjct: 1665 IGERLAAAPPVGLPDPSRRPGSAVVLVDGEPALYAPENMKALVSYT-PETAAFRSALRAL 1723 Query: 1493 TTALRR--------EPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG 1538 T LRR R R + VN + + M L EAG + P+G+ + Sbjct: 1724 TEFLRRAAARDPGIAARKRTVVESVNGVSALERAMGDALAEAGLARDPRGMRFA 1777 Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 73/122 (59%), Gaps = 7/122 (5%) Query: 5 PDPSSLLPDV--FSPATRDWFLRAFKQ-PTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 P S P FS A+R WFL AF PT+VQ + W R E+ALV+APTGSGKTLAA Sbjct: 2 PSDFSSFPAFSGFSRASRSWFLSAFPSGPTSVQERAWAAIGRGENALVVAPTGSGKTLAA 61 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 F A+DRL R ED K R+LY+SP+KAL DV+RNL+ PL G+ R E Sbjct: 62 FFSAIDRLMRRSAEDREA----KGVRVLYVSPLKALAADVERNLRRPLAGVERAARGLRE 117 Query: 122 TE 123 + Sbjct: 118 SG 119 >UniRef50_B8J8Q2 DEAD/H associated domain protein n=3 Tax=Cystobacterineae RepID=B8J8Q2_ANAD2 Length = 1419 Score = 1059 bits (2738), Expect = 0.0, Method: Composition-based stats. Identities = 472/1526 (30%), Positives = 652/1526 (42%), Gaps = 196/1526 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D F P R WF F PT Q W A LV APTGSGKTLAAFL A+D L ++ Sbjct: 3 DTFHPVVRAWFAGRFGDPTEPQSLAWPQIALRRDVLVSAPTGSGKTLAAFLSAIDGLLQD 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G +R++Y+SP++ALG D+ RNL+ PL I G LRV +RT Sbjct: 63 G----LAGRLEDRTRVVYVSPLRALGNDIARNLEAPLAEIRAAALEAGLAPPELRVAVRT 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT A R L PP +L+TTPESLYL+LT R RETL GVETVI+DE+HA+AG +RGA Sbjct: 119 GDTTASARRSLLLRPPHLLVTTPESLYLLLTGERGRETLEGVETVIVDEIHALAGDRRGA 178 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 HLALSLERL+AL QRIGLSATV ++VA FL G V +V Sbjct: 179 HLALSLERLEALARRRPQRIGLSATVEPVAEVARFLVGAPRV------GRTGRPRCSIVE 232 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 V ++ + +W + + V HRST+VF +R LAE+ Sbjct: 233 VGRRRAFDLAIEVPRDELSSVASKELWAETYDRVAEIVRAHRSTLVFVGTRRLAERAAHA 292 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L E +HHGS+S+ +R E+ L Sbjct: 293 LAERLGEGE-------------------------------VAAHHGSLSRTRRLAAEERL 321 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+G L+ VVAT+SLELGID+G VD+V+Q+ +P ++A+GLQRIGRA H GG KG FP Sbjct: 322 KAGALKAVVATASLELGIDVGDVDVVVQLGSPGALATGLQRIGRAAHVKGGTPKGRLFPM 381 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 +R +LV+ A +V + RLE + PLDVLAQQ VA AA A+ D + RRA P Sbjct: 382 SRDELVECAALVRGLRRARLEPVAVRDAPLDVLAQQVVAEAACGAIHEDRLFELCRRAWP 441 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++ L R FDA + MLS + A L + +T R GA++ A+T GGTIPD Sbjct: 442 YRALAREDFDAVVQMLSEGIATSRGRA-SALLHRDGVNRRVTGRRGARIAALTGGGTIPD 500 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ VG+LDE+ ES DI LG TSWRI+++ V V A Sbjct: 501 TAQYAVVAEPE-----GAVVGQLDEDFAVESIAGDIFLLGTTSWRIRRVEAGVVRVEDAH 555 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS-----GTIPPWLAEENTIANIQ 666 G +PFW GE GR L + L + Sbjct: 556 GAPPGVPFWNGEAPGRSGALSAEVSALREELEPRLADPAAAAAWLEAEAALPAAGARQVV 615 Query: 667 GLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWG 726 + R G +P LV ER DE G ++++H+P G R + +A+ R + Sbjct: 616 EYLAAGRAMLGALPTQHTLVAERFFDEAGGMQLVVHAPLGARTNRALGLALRKRFCRTFD 675 Query: 727 ADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAAR 786 + A+D+G++ + ++ P L +++ +AV + +F R+R A R Sbjct: 676 FELQAAATDEGVLLSLGPQHAFPLESIFSYVTPATLDEVLTQAVLQAPMFGVRWRWNATR 735 Query: 787 ALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGYPDFPVILETLREC 831 AL +P G R P R+RA LL PD P++ ETLR+C Sbjct: 736 ALAIPRLFKGKRMPPPIARMRADDLLSAVFPAQTACQDNAPGGPIEVPDHPLVRETLRDC 795 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRA 891 L + D AL ++ R+ GEI++ V T PSP A LL + Y DAPL ERRA Sbjct: 796 LGEAMDAGALRGVLERIAAGEIRLVAVDTPEPSPLAHELL--NARPWAYLDDAPLEERRA 853 Query: 892 SVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPM 951 +++ L + I +V ++ + + + D L +L + Sbjct: 854 RAVAVRRALPPAEAAAAGALDP---AAIEEVASQVW-----PAPRDADEVHDALLDLVLL 905 Query: 952 TVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPES 1011 + A A +L+ L A R + + L L + Sbjct: 906 PAGEAAA--------WAPWLDALAAAGRARTVTDGERTWWVATERLGALPLDSVNPLTLT 957 Query: 1012 LPEIYLHRVSYPLR------------------------DLFLRYLRAHALVTAEQLAHEF 1047 ++PL + ++ VTA +LA Sbjct: 958 RSTPLALDSAHPLTLSVGRNAAGVEGRAAPAPAPDPMLAVLRGWMTHLGPVTAARLAART 1017 Query: 1048 SLGIAIVEEQLQQLREQGLVMNL----------QQDIWVSDEVFRRLRLRSLQAAREATR 1097 +L +A E L L +G V+ W V R+ ++ R Sbjct: 1018 ALPLAATEAALAALEAEGRVLRGTFLPGEPWSPDTPHWCERGVLARIHRLTIGRLRREIE 1077 Query: 1098 PVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWE 1157 PV+ + R L Q P T G G++ VI QL G A WE Sbjct: 1078 PVSTAVFLRFLARWQHAAPGT-------------RLHGTSGLLEVIGQLQGFHAAAGAWE 1124 Query: 1158 SQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDG-------------LVALHLQEY 1204 +LPARV+ Y +LD L A+G V W DG V L L+E Sbjct: 1125 RDLLPARVQAYEPRLLDALCASGEVAWGRLHVAPPQDGLPPRRRGAPTRSAPVTLALRED 1184 Query: 1205 AAESFT--PAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEAL 1262 A A+ + +V VLA GA F +++Q +R + GE+ +EAL Sbjct: 1185 LPWLLEATAAGAEPPPLGTIAAELVEVLARRGASFLGELAQAVRTEAGEA------EEAL 1238 Query: 1263 WALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLA 1322 W LV G + D +A LRAL RT Sbjct: 1239 WELVSGGRVACDGFAGLRALVSPPPGHRTR-------------------------PAAAG 1273 Query: 1323 GRWSLLQVEPLNDTERMLA--------LAENMLDRYGIISRQAVIAENIPGGFPSMQTLC 1374 GRW+LL+ P A LA L RYG++ R + E P + + + Sbjct: 1274 GRWALLRAGPPAPGAEADALPEATLEPLARQYLRRYGVVFRDLLAREARPPPWRDLVRVY 1333 Query: 1375 RSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWG 1434 R++E G I GRFV G G QFA +D LR + P+ + A DP N+ G Sbjct: 1334 RTLEARGEIRGGRFVSGFSGEQFAAPEAVDALRATRR---EAAEDAPLEVCAADPLNLAG 1390 Query: 1435 NLLPWPAHPATLVPTRRAGALVVVSG 1460 L P P PA AG VVV G Sbjct: 1391 ILTPGPRIPA------AAGGRVVVGG 1410 >UniRef50_A8RJ57 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ57_9CLOT Length = 1405 Score = 1058 bits (2735), Expect = 0.0, Method: Composition-based stats. Identities = 431/1548 (27%), Positives = 678/1548 (43%), Gaps = 194/1548 (12%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PAT WF + F +PT +Q + W A +H LV APTG+GKTL+AFL +D+L G Sbjct: 13 FLPATESWFRKTFGEPTKIQREAWPAIADGKHVLVSAPTGTGKTLSAFLVFIDQL----G 68 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER-------RRRGETEVN-L 126 ++ ++Y+SP+K+L D++ NL+ PL+GI E R G + + Sbjct: 69 GLAERGELKEELYVIYVSPLKSLAGDIRENLRKPLEGIGAEAPGESKAESRPGNPSIGQI 128 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVA 185 + IRTGDTP +ER ++ ++PP ILI TPESLYLMLTS+ R+ L+ + +I+DE+HA+ Sbjct: 129 QTAIRTGDTPQKERQRMVKHPPHILIITPESLYLMLTSKSGRQVLKTAKAIILDEIHALI 188 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 +KRGAHL LS+ RLD L QRIGLSAT+ AA+L + V + P + Sbjct: 189 DTKRGAHLMLSVARLDKLCGRRLQRIGLSATIEPLELAAAYLSPEPAV-ICAPSMDKQVD 247 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 I+++ + R+ +W + + + L +S I F+ R Sbjct: 248 IQVI---------------GTAPAVGRRKDPVWEELGMAVYRQCLSCKSVIAFSEGRRYV 292 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 EKL +N L AR HHGS+SKEQR Sbjct: 293 EKLAYYVNLLGGD-------------------------------GFARVHHGSLSKEQRD 321 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E+ L+ G LR + ATSS+ELGID+G V+ V+QV P +++S +QR+GRAGH G VS Sbjct: 322 EVERDLREGRLRLLCATSSMELGIDVGDVEQVLQVGCPRTISSTMQRLGRAGHNPGRVSV 381 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 +PRT + V + + G +E PP LDVLAQ V+ A+ ++ +D+ Sbjct: 382 MYMYPRTAPESVYCGMTAQVARRGGVERANPPRMCLDVLAQHLVSMASGESYSIDDVMDV 441 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 + R+ P+ + R+ + L ML+G Y RP+++++R G + +++LA + Sbjct: 442 LERSYPFYQVTRKDVEDVLAMLAGDYEHSREIPVRPRILYDRIHGRVAGDVYSRMLATAA 501 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 GGTIPD+GMY+ + ++GELDEE VYESR+ D LG+ WR+ + +D V Sbjct: 502 GGTIPDKGMYAAKTED------GVKLGELDEEFVYESRIGDRFMLGSFGWRVVRQDKDSV 555 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG---AFFSGTIPPWLAEENTI 662 IVT AP ARLPFW+GE GR G L L + +E+ Sbjct: 556 IVTQAPAEGARLPFWKGETKGRDLRTSLAFGRILGELEKACREGELEKALEKLGLDESAS 615 Query: 663 ANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIH 722 + G I Q AT +P R +V+E +D G ++++H+ +GRRV+ P ++ + I Sbjct: 616 VHASGFITRQIQATEGLPDDRTIVVEHFKDSTGSHQVMVHALFGRRVNGPLSLVLRHMIR 675 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 G D V +DG + P +LP+ +F P+++ ++ + + LF FR Sbjct: 676 NTMGMDVGSVDEEDGFLL-YPYGREQLPEGLLFQINPDQVRPVLEAILPDTPLFGMTFRY 734 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 AARAL+M + G R PLW QRL+++++L PD P+I ET RECL+ +D+ + Sbjct: 735 NAARALMMGMKRNG-RQPLWMQRLKSTEMLSSLMDQPDHPLIRETKRECLEHQWDISGVM 793 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 ++ R+ G I + ++ PSP + + AE MY+ + R +V Sbjct: 794 EILARIRSGFITVREIWLDVPSPMSLPFQWQAEAEEMYEYSPVTPKIRQTV--------- 844 Query: 903 NLLGQVDPGELLDPQVIRQVEEELQRLAPGRR-AKGEEGLFDLLRELGPMTVEDLAQRHT 961 E L +++ EEL R R+ + EE L LL G + +L Sbjct: 845 --------QEDLKKALLKPTPEELSRGWSRRKMPENEEELHSLLMMEGDLEAGEL----- 891 Query: 962 GSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVS 1021 + A +LE L + AA D L + E +H Sbjct: 892 ---DIPADWLEALARQGLACYVEPG-------IWIAAEHEDEYMRALQQQDEEAAMH--- 938 Query: 1022 YPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVF 1081 + R L TA + + L + E L +L + Q ++ ++++ Sbjct: 939 -----IVRRMLYYRGGQTAVDVRERYFLSEEMTEALLDKLCRCKKAVEDQG-VYYHEKLY 992 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR 1141 R R ++ R T A+ YA L+ R + + + Sbjct: 993 ERAREGHIRILRSQTATQPASHYAALMAAR-----------------AVTHSTAEEQLRE 1035 Query: 1142 VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHL 1201 +E+ P WE+ RV Y + +LD LLA G W ++ + L Sbjct: 1036 AVEKGCRKPCPVRFWENVYFARRVERYGASLLDRLLAQGDYFW----RMSPEGTLCFCSY 1091 Query: 1202 QEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEA 1261 ++ E+ A A+ A + + L GA F + +++ ++ QE Sbjct: 1092 EDIDWEA--SAGAETAGLKGDELLMYQELKRRGASFLKFLTKIPKEGSA--------QEV 1141 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNL 1321 L +L +G++ +D + P+R + + R+ R Sbjct: 1142 LLSLAEKGLVCADSFVPVRQWQNQDKVKKVAVRQRVNTRVMALS---------------- 1185 Query: 1322 AGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAE-----------------NIP 1364 AGRW +++ E E D I+ R+ Sbjct: 1186 AGRWDIVRPVRKYGPE---EWLEQFFDENMILCRETFRKSVQAVSDSPYVQTGEDGKKWE 1242 Query: 1365 GGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVAL 1424 + + R E +GRI RG FVEG+ GAQF D + T A + V L Sbjct: 1243 WSWAQALEILRIWEYTGRIRRGYFVEGMSGAQFVRGEDYDAV----TGALREPDDHTVWL 1298 Query: 1425 SANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKE-EL 1483 + DPA VWG +L P L AG V + GKL + + G+ + + ++ + Sbjct: 1299 NGTDPALVWGKVLELPEKCGFLA---VAGTAVALKAGKLAAVMERQGRVLRICDAEDMKE 1355 Query: 1484 LAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSS 1531 + E A + R L E L+ AG+ Sbjct: 1356 VMAEFVRAFKQGAIYPEQKRLVLKEYPAEAA------EALQHAGYMRE 1397 >UniRef50_A9GB61 Putative ATP-dependent helicase, N-terminal n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GB61_SORC5 Length = 1497 Score = 1044 bits (2699), Expect = 0.0, Method: Composition-based stats. Identities = 465/1573 (29%), Positives = 665/1573 (42%), Gaps = 221/1573 (14%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F P WF F P Q + W V A AL+ APTG+GKTLAAFL+ LDRL R+ Sbjct: 2 FHPVVDRWFRDRFGAPAPAQERAWPVIAAGRDALISAPTGAGKTLAAFLFCLDRLVRDAA 61 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 E + +LYISP+KAL DV RNL+ P+ I+ G +R +RTGD Sbjct: 62 RGALE----DRTDVLYISPLKALSHDVHRNLEQPIAEISAAMEAAGLPAPGIRALVRTGD 117 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 +PAQER + PP +L+TTPES +++LTS R L GV TVI+DEVHA+AG KRGAHL Sbjct: 118 SPAQERRAMAARPPHVLVTTPESAFILLTSASGRRALSGVRTVILDEVHAIAGDKRGAHL 177 Query: 194 ALSLERLDALL----HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 ALSLERL+ L+ QR+GLSATVR A + G R + + Sbjct: 178 ALSLERLEDLVISQGGARPQRVGLSATVRPIEIAARLVAGARE-------------LPQI 224 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 V V D+ ++ A W I I RST+VF N+R L E++ Sbjct: 225 VDVGQRRDLDLAIEVPRDELGAVCTHEQWTEIYDRIAALAEGARSTLVFVNTRRLVERVA 284 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 L + +HHGS+S+ +R E+ Sbjct: 285 HALGARLGEDV-------------------------------VAAHHGSLSRARRLSAER 313 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 LK+GELR VVAT+SLELGID+GAVDL V +P S+ LQRIGR+GH + +G F Sbjct: 314 RLKAGELRVVVATASLELGIDVGAVDLACLVGSPRSINVALQRIGRSGHALAATPRGRLF 373 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 P TR LV+ A IV G L+ +T PLDVLAQQ +AA A + + Y+ VRRA Sbjct: 374 PLTRDQLVECAAIVRAARRGELDRMTSREGPLDVLAQQIIAACACEERDQEGLYALVRRA 433 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR---------PGAQL 540 AP++ L RR FDA + M+SG + D A + R ++ GA+L Sbjct: 434 APYEGLSRRDFDAVVAMVSGGAAAADDGASAARGARQRAGSLVYRDAIGGRLRGRRGARL 493 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 A+TSGG IPD V+L +VG LDE+ ES D+ LG TSWR+ ++ Sbjct: 494 AALTSGGAIPDIAAVDVVLQP-----DGTKVGTLDEDFAIESSGGDVFLLGNTSWRVLRL 548 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG--------------- 645 Q+ V A G + +PFW GE R EL + +A Sbjct: 549 EGGQMWVEDAHGAAPTVPFWLGEAPARTPELSAEVAALRAEVAARLDEERADGARPAAER 608 Query: 646 ------------AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDE 693 + + ++ IE R A G VP +V+ER DE Sbjct: 609 GQGGEEARAARSRAARWLMEACALDARGALLVRDYIEAGRAALGAVPDGATVVVERFFDE 668 Query: 694 IGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAA 753 G +I++H+P G RV+ +A+ R + + A+DDG++ + G D Sbjct: 669 AGGQQIVVHTPLGGRVNRALGLALRKRFCRSFDFELQAAATDDGVLLSLSAEHGIPIDEV 728 Query: 754 IFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLE 813 + L PE L +++ +A +F RFR A+RAL + G R P QR+RA LL Sbjct: 729 LDLVRPEGLEEVLVQAALQGPMFRTRFRWAASRALALLRFRGGRRVPPALQRMRADDLLL 788 Query: 814 IA----------------QGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 PD P++ E LR+CL ++ D+ L L+ L G I++ Sbjct: 789 SIFPEQQGCQDNHGLFAHVEPPDHPLVREALRDCLTELMDVEGLRALLVGLRSGAIRVVA 848 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQ 917 + T PS F+ +L F+ DAPL ERRA + + L + ++ LDPQ Sbjct: 849 LDTPEPSVFSHEILNANPYAFL--DDAPLEERRARAVRVRRGLPAEVAERLGG---LDPQ 903 Query: 918 VIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAV 977 V+ +V E + + + L +LL + + E+ + E V Sbjct: 904 VVAEVVAEAR-----PDVRDADELHELLLDRVALPAEEGIRSGLARHFEALCAAGRAAEV 958 Query: 978 KRIFPAMISGQERLACMDDAARLR-------DALGVRLPESLP-EIYLHRVSYPLRDLFL 1029 A + R + + A V +P ++ + + L Sbjct: 959 GAAPGAGVPRAPRWVATERRPLVEVIWPEAVFAPDVAVPPAVRGDAGAVDRGAAITALVR 1018 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQ----------------- 1072 +L A ++ E LA + + L ++ G + + Sbjct: 1019 GFLSAAGPISTEDLASRLDVPAYEAQSALARIELAGGALRGRFLPSAPPRPSQAAAGGGD 1078 Query: 1073 ----------------------DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLE 1110 W + R+ R++ R+A P A R LL Sbjct: 1079 LSQAAAGGGDLSQAAAGGGDLSIEWCDRHLLARIHRRTVTGLRKAIEPATAAELLRFLLA 1138 Query: 1111 RQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSS 1170 QGV P T G G+ RVIEQL G L A WE +LPARV Y Sbjct: 1139 WQGVRPGTQ-------------ARGPGGLGRVIEQLQGFELAAGAWEQAVLPARVAGYDE 1185 Query: 1171 EMLDELLATGAVIWSG----QKKLGEDDGLVALHLQEYAAESFTPAEAD----QANRSAL 1222 +LD L +G V W + L L+ P EA+ A+ S Sbjct: 1186 GLLDALCLSGEVAWGRVVPRDAAAPTRAAPITLALRRDLPWLLAPREAEGAPPPASLSEA 1245 Query: 1223 QQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRAL 1282 Q +++ L GA F ++ + G ++EALW LV G++T D +A LR+ Sbjct: 1246 AQGVLSFLTRAGASFFDDLAVGVGGVGGAGRSRDEVEEALWELVAAGLVTGDGFAALRS- 1304 Query: 1283 TRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEP---------- 1332 + A + P +GRWSLL+ P Sbjct: 1305 -------------LLGGGAAVALGAGRLRGGARRGGPVASGRWSLLRSRPDAFAPAAGED 1351 Query: 1333 LNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGL 1392 + + ALA L RYG++ R+ + E P + + + R +E +G++ G V G Sbjct: 1352 AEGPDVVEALAHQYLRRYGVVCRELLAREPRPPAWRDLLRVYRRLEMAGQLRGGHLVAGF 1411 Query: 1393 GGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRA 1452 G FA +D LR + + V LSA DP N+ G + P P PA L Sbjct: 1412 VGEHFALPEALDALRAVRREPLSG---EIVQLSACDPLNLVGIVTPGPRVPAAL------ 1462 Query: 1453 GALVVVSGGKLLL 1465 G +V+ G LL Sbjct: 1463 GNVVIYRDGVPLL 1475 >UniRef50_A9KJU0 DEAD/DEAH box helicase domain protein n=3 Tax=Clostridiales RepID=A9KJU0_CLOPH Length = 1381 Score = 1029 bits (2660), Expect = 0.0, Method: Composition-based stats. Identities = 420/1534 (27%), Positives = 678/1534 (44%), Gaps = 183/1534 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D+F T WF +A +PT VQ + W A LV APTG+GKTL+AFL +D+L R Sbjct: 7 DMFDSVTSRWFQQALGEPTMVQKEAWRSIADGFDTLVSAPTGTGKTLSAFLVYIDQLMR- 65 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE-------VN 125 RE ++ ++Y+SP+K+L D++ NL+ PL GI E ++ + + Sbjct: 66 ---LAREEKLKEEIYVIYVSPLKSLAGDIRENLKKPLHGILGEIIKQEKDSELKKQIIPS 122 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAV 184 + V +RTGDT ER ++ ++PP ILITTPESLYL+LTS+ + L VIIDE+HA+ Sbjct: 123 ISVAVRTGDTTPAERRQMIKHPPHILITTPESLYLLLTSKSGQGMLNTARVVIIDELHAL 182 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 SKRGAHL LS+ RLD L QRIGLSAT+ A +L + P +V P + Sbjct: 183 IDSKRGAHLMLSIARLDRLCGQPLQRIGLSATIEPLELAANYLSPE-PAKIVAPTMTKKR 241 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + I P++ + R+ +W I I D + RS I F R Sbjct: 242 KFMITSPLSEEVGI--------------RKTPVWEEIAAIIYDSCCKARSVIAFVEGRRF 287 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AEKL +N+L R+ HHGS+SKEQR Sbjct: 288 AEKLAHYVNQLGGDGFART-------------------------------HHGSLSKEQR 316 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 EQ+L+ G+LR + ATSS+ELGID+G +D V Q+ P +++S +QR+GRAGH VS Sbjct: 317 LEVEQSLRDGKLRLLCATSSMELGIDVGEIDEVFQIGCPRTISSTMQRLGRAGHNPDRVS 376 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYS 484 FPR+ + + + E GR+E+ PP DVLAQ V+ A D +V E Sbjct: 377 VMQMFPRSPIEGLYCGLTAEVAKQGRVEDAKPPRMCFDVLAQHLVSMATGDGYEVQEVLD 436 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 + RA P++++ + L ML+G Y RP+++++R + P +++LAV+ Sbjct: 437 ILARAYPFREVTLKDIHDVLKMLAGDYEHEREIPVRPRILYDRIHDRVEGDPYSRMLAVS 496 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 +GGTIPD+G+Y V E ++GELDEE VYESRV + LG W+I I +D Sbjct: 497 AGGTIPDKGLYQVKSEE------GVKLGELDEEFVYESRVGEKFLLGTFGWKIVNIQKDA 550 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS---GTIPPWLAEENT 661 VIV PA SA+LPFW+GE GR + G G+ L L+ + + ++ Sbjct: 551 VIVAPASSGSAKLPFWKGEIKGRGLKTGLAFGELLRKLSRANEADCSFEELKAFGMDQAA 610 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 I+ Q ATG +P + +++E +DE G +++++HS +GR V+EP A+ I Sbjct: 611 ATGAGEFIKRQIKATGCLPDDKTILIEHFKDETGSYQMMVHSVFGREVNEPLAILIQEAA 670 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 + V DDG + P LP+ + + P L ++ + ++ LF FR Sbjct: 671 SRSLQRVINYVVDDDGFLL-YPYDGQPLPEGLLTMISPALLQGVLEARLIATPLFQITFR 729 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPAL 841 R+++M R G R PLW QR+R +Q+L+ Y P+I ET RECL+D+++LP L Sbjct: 730 YNMGRSMMMGVRKNG-RQPLWVQRMRCAQMLDSILSYESHPIIRETKRECLEDIWNLPGL 788 Query: 842 ERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELL 901 ++ + I++ ++ PSP + MY ++ LD+ Sbjct: 789 MHVIHGILSNTIEVREMFLELPSPMSLPFRRQTEGAMMYDYAP------STTGILDAS-- 840 Query: 902 RNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHT 961 R L Q + + + ++I +V + E+ L LL G M +L Sbjct: 841 RKALEQANNLQP-EHKMIEEVSKRAS------LPVNEQELHTLLMIEGDMIAGELKVSI- 892 Query: 962 GSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVS 1021 +L +L++ + AL R E+ + Sbjct: 893 -------DWLLSLVSEG---LVHYIEPGLWIATEQLELYERALNKRETEACQK------- 935 Query: 1022 YPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVF 1081 + R +R +QL + L ++ + L L +QG V+ Q + + ++ Sbjct: 936 -----ILRRAVRYRGGQAVKQLVERYYLPEDVILDNLTSLCDQGSVIK-QGEYYYHTTLY 989 Query: 1082 RRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR 1141 + ++ R+ + + + LL + + + + Sbjct: 990 EKALKLTVYERRDQIKTLPKERFTALLAG-----------------KTEFTASPKEQLSK 1032 Query: 1142 VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHL 1201 V+EQ G SL E+ +LPARV Y ++LD LL+ G + +G+ + Sbjct: 1033 VLEQFVGSVFQPSLLENVLLPARVAKYRPDLLDALLSQGYFQYRI-----TKEGISFHYS 1087 Query: 1202 QEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEA 1261 ++ E+ P+ + +Q + + GA F ++ + K L EA Sbjct: 1088 EDVDWEASLPSP--EPPLEETEQLLYEAMQKRGASFLNSLTSLLAGKS--------LYEA 1137 Query: 1262 LWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNL 1321 + +L+ +G++ +D + P+R + + + R+ A+ + Sbjct: 1138 VLSLLEKGLVCADSFVPIRMWLNNEKLKKGNVRQLVNAKVMVMSSGR------------- 1184 Query: 1322 AGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSG 1381 +V M E + D+ I+ R+ V + + E + Sbjct: 1185 ------FEVARPLKEATMEQKLERLFDQVVIVCRETVRGIS----WAEALKELSVWEYTE 1234 Query: 1382 RIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHY--TPVALSANDPANVWGNLLPW 1439 R RG FVEGL G QF R +D + H + LSA DP +WG P+ Sbjct: 1235 RARRGYFVEGLSGIQFI------REKDFISTMYTLEHPKKEILWLSAMDPYQIWGKYFPY 1288 Query: 1440 PAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRRE 1499 + + + AG +V +S G + + GK + V+ + A E+F Sbjct: 1289 EKERSFV---QVAGTVVALSSGVPIAVFERQGKTLKVFDFEVLKSALELFVLDYERKCFY 1345 Query: 1500 PRLRFTLTEVNDLPVRQTP--MFTLLREAGFSSS 1531 P + +++ P +L GF Sbjct: 1346 PNGSRLV-------IKEYPKEAEEVLSAVGFRKE 1372 >UniRef50_C5EPU4 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=C5EPU4_9FIRM Length = 1438 Score = 1026 bits (2652), Expect = 0.0, Method: Composition-based stats. Identities = 455/1578 (28%), Positives = 700/1578 (44%), Gaps = 202/1578 (12%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 P+ L +FS T WF +PT VQ TW A + LV APTG+GKTL+AFL + Sbjct: 2 PTDTLT-LFSQPTAQWFKDTLGRPTKVQEDTWPAIASGQPVLVSAPTGTGKTLSAFLVFI 60 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR------- 119 DRL+ E ++ ++Y+SP+K+L D++ NL PL+GI E RR Sbjct: 61 DRLY----AMAEEGTLKEELYLIYVSPLKSLAGDIRENLNRPLEGIRQEMERRVGAARQT 116 Query: 120 ------------------------GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTP 155 G T ++++VGIRTGDTP ++R ++ ++PP ILI TP Sbjct: 117 GYADLAGNVHPAGKIHPAGDVHPAGTTSLDIQVGIRTGDTPQKDRQRMVKHPPHILIITP 176 Query: 156 ESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLS 214 ESLYLMLTS ++ LR VIIDE+HA+ +KRGAHL LS+ RLD L QRIGLS Sbjct: 177 ESLYLMLTSMTGQKVLRTARAVIIDELHALIDTKRGAHLMLSIARLDRLCGRPLQRIGLS 236 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 AT+ AA+L + V + M+ + S R+ Sbjct: 237 ATIEPLELAAAYLSPEPAV----------------ICAPAMEKQIRIEILGTTPSQGRRK 280 Query: 275 GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE 334 +W + + + L RS I F+ R AEKL +N L Sbjct: 281 DPVWEELGQAVYRQCLSCRSVIAFSEGRRYAEKLAYYVNLLGGD---------------- 324 Query: 335 STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAV 394 AR HHGS+SKEQRA EQ L+ G LR + ATSS+ELGID+G + Sbjct: 325 ---------------GFARVHHGSLSKEQRAEVEQDLRDGRLRLLCATSSMELGIDVGEL 369 Query: 395 DLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENL 454 DLVIQV P +V+S +QR+GRAGH G VS +PRT + V + + G +E+ Sbjct: 370 DLVIQVGCPRTVSSTMQRLGRAGHGPGRVSVMYMYPRTASESVYCGMTAQVARQGGVEHT 429 Query: 455 TPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG 514 PP LDVLAQ V+ A + V++ + + R+ P++D+ A L ML+G Y Sbjct: 430 KPPRMCLDVLAQHLVSMANGEGYCVEDVMAVLERSYPFRDVTGEDIKAVLSMLAGDYEHR 489 Query: 515 DFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGEL 574 RP+++++R G + +++LA +GGTIPD+G+Y+ + ++GEL Sbjct: 490 RDIPVRPRVLYDRIHGRVEGDAYSRMLATAAGGTIPDKGLYTAKTED------GVKLGEL 543 Query: 575 DEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEM 634 DEE VYES++ D LG+ W+I I +D V V+ P ARLPFW+GE GR + Sbjct: 544 DEEFVYESQLGDKFMLGSFGWKITGIDKDTVYVSQVPAEGARLPFWKGEIRGRTLKTSRE 603 Query: 635 IGDFLHLLADG---AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCR 691 G L L + +E + N G +E Q +TG +P ++ +V+E Sbjct: 604 FGKILAGLEAAHEQGRLREELSALGMDEAAVINASGFLERQIQSTGGLPDNKTIVVEHFT 663 Query: 692 DEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPD 751 D G +++LH+ GRRV+ P ++ + + + G D V +DG + P G +P+ Sbjct: 664 DHTGCHQVMLHALLGRRVNGPLSLLLQHMVRNICGFDIGCVDEEDGFLL-YPYGSGVMPE 722 Query: 752 AAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQL 811 ++ EP+++ + + + + LF FR AARAL+M + G R PLW QRL+++++ Sbjct: 723 GLLYRLEPDQVRETLEAMLPLTPLFGMAFRYNAARALMMGMKQGG-RQPLWMQRLKSTEM 781 Query: 812 LEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 L+ D P+I ET RECL+D +D+ + +++ + G I + +V T PSP + L Sbjct: 782 LDSLMNEKDHPLIRETKRECLEDQWDIDGVIQILHEIRAGLIHVREVCTDVPSPMSLPLQ 841 Query: 872 FGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAP 931 + A MY+ R +V L P+ + + ++E RL Sbjct: 842 WQVEAAEMYEYAPATPGIRQAVY-------DELKYLEGIRPA--PEALEK-QQERTRL-- 889 Query: 932 GRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERL 991 + E L +L G + +L + +L +L A R Sbjct: 890 ---PQDEAQLHSILMTEGDLEAGEL--------DVPVEWLASLAAQGRAL---YIEPGLW 935 Query: 992 ACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGI 1051 + A + L E + R LR T Q+ + L Sbjct: 936 IAAEQEEEYEKAFSMD---GLEEA---------TAIVRRLLRYRKGHTPGQIGERYFLPE 983 Query: 1052 AIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLER 1111 V L+ L +G ++ I+ +++ R R +L+ R T YA LL R Sbjct: 984 EKVGVILELLCSRGEIVEADG-IYYHRKLYDRARQSTLKNLRRETATQPGAHYAALLAGR 1042 Query: 1112 QGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSE 1171 + + + + + +E G P WE+ +LP RVR+YS Sbjct: 1043 -----------------AKPYTQADEQLKKTLELYCGRMFPVRFWENVLLPRRVRNYSEG 1085 Query: 1172 MLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLA 1231 MLD LLA G W K+ D L ++ ++ P LQ I L Sbjct: 1086 MLDRLLAEGDYYW----KMSPDGALCFCRYEDIDWDAPLPDMEGILGGEELQ--IYRELK 1139 Query: 1232 DGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNART 1291 GA F + ++ ++K QE L L +G++ +D + P+R + Sbjct: 1140 RRGACFLKFLADIPKEKSA--------QELLLGLAEKGLVCADSFVPVRQWQNREKVKKA 1191 Query: 1292 STRRSHRAR-----RGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENM 1346 + R+ AR GR +P+ P+ L + Q +P+ E A + Sbjct: 1192 TARQRVSARVMALSAGRWDIVRPLKPKKMEEWLEL-----IFQEQPVMCRETFRRAAAGL 1246 Query: 1347 LDR-YGIISRQAVIAENIPG----------GFPSMQTLCRSMEDSGRIMRGRFVEGLGGA 1395 Y QA A + G + + L R E +G++ RG FVEG+ GA Sbjct: 1247 AGSPYLPGFSQAGAARSDAGEAAGAARSDMNYQNAMELLRIWEYTGQVRRGYFVEGMSGA 1306 Query: 1396 QFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGAL 1455 QF + + + T A + + L+A DPA +WG +L P L G Sbjct: 1307 QFIRKEEYEGV----TAALKAPEDGIIWLNAADPAQIWGKILVQPGERDFL---NVPGTA 1359 Query: 1456 VVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR 1515 V + G++ L + G+ + V++ + +VF R P L+ + VR Sbjct: 1360 VALHCGRVTAVLERQGRVLRVFESQGLEQTLQVFVNDFKGKRLFPELKRLI-------VR 1412 Query: 1516 QTPM--FTLLREAGFSSS 1531 + P L+ AGFS Sbjct: 1413 EYPEGTGETLKRAGFSRE 1430 >UniRef50_D2L062 DEAD/DEAH box helicase domain protein n=2 Tax=Desulfovibrio RepID=D2L062_9DELT Length = 1472 Score = 1011 bits (2613), Expect = 0.0, Method: Composition-based stats. Identities = 470/1550 (30%), Positives = 680/1550 (43%), Gaps = 135/1550 (8%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P WF +PT +Q W A EH L +APTGSGKTL AFL AL+ L Sbjct: 4 LFHPLVARWFSEHVGKPTDIQELAWPRIAAGEHVLAVAPTGSGKTLTAFLSALNSLATGA 63 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 ++Y+SP+KALGTDV+ NL PL G+ GE LR IR+G Sbjct: 64 WPTG-------RVSVVYVSPLKALGTDVRANLLTPLAGLRRAFAAAGEDFPALRAEIRSG 116 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAH 192 DTP+++R ++ R PP+ILITTPESL L+L+S+ R L V VI+DE+HAVAGSKRG Sbjct: 117 DTPSEDRRRMLRQPPEILITTPESLNLLLSSQGGRGMLTAVRLVILDEIHAVAGSKRGVF 176 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 L ++ERL L QR+ LSATV VAA +GG P ++ P + + IV Sbjct: 177 LLSAVERLAGLAG-EFQRVALSATVSPLETVAAMVGGFVPSGDLSDPVLTPRPVAIVQSR 235 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 A V D R S + + +L +RST+VF NSR EKL + Sbjct: 236 AEKRMDVRVHFAPWPDDRPPR-ASFIQILADDVRRRILANRSTLVFVNSRKFCEKLARLI 294 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 N+ L +HHGS+S+E R E LK Sbjct: 295 NDDQPEILAY-------------------------------AHHGSLSRELRQTVESRLK 323 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 +GEL+ VVAT+SLELGID+GAVD V+ V P +V++ +QRIGR+GH+VG VS+ +F P T Sbjct: 324 AGELKAVVATNSLELGIDIGAVDEVLLVECPPTVSAAVQRIGRSGHRVGEVSRAVFLPTT 383 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 +DL+++AV+ +E + P PLDVLAQ VA ++A VD +Y VR+A P+ Sbjct: 384 EKDLLEAAVMARAAHERDIEPIRPVSAPLDVLAQTLVAMCGVEAWDVDAFYQAVRQAWPY 443 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 +DL RR FD TL ML+GRY + P L + G + AR GA L SGG I DR Sbjct: 444 RDLSRRAFDLTLAMLTGRYAATRIRELAPLLAVDALDGTVAARKGALLRLYASGGVIADR 503 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 G Y++ + + R+GELDE V+E+R+ + GA +WRI++IT V V+PAP Sbjct: 504 GYYALRRQDSDG-----RLGELDEVFVWEARLGQVFAFGAQNWRIERITDADVFVSPAPA 558 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEENTIANIQGL 668 S PFW G+ R +++ FL L D AF I E + G Sbjct: 559 GSVPAPFWLGDARSRDRHFSDLLAHFLEEADVRLDDPAFGEELIRDHCLEPGAAEALLGY 618 Query: 669 IEEQRNATG-IVPGSRHLVLERCRDEIG---DWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 + Q+ ATG +P +RHL++E G ++ILH+P G P A+ + + Sbjct: 619 LRRQKEATGSGLPHARHLLVEVTATGPGGAPGNQVILHAPLGLSRTAPLALVLEAALSRK 678 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 +G V A +D + A +P P + + ++RE + S F A FRE A Sbjct: 679 YGHAIPVFAGNDCVAATLPGE--IDPLDMLEAVPGRAVAGLLRERLEGSGSFGAAFREAA 736 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 RALL+P G R PLW RLRA +LL + DFP++LE R CL D++D LE Sbjct: 737 GRALLLPRDGFGKRQPLWITRLRARKLLAAVASHGDFPMVLEAWRACLVDIFDPAGLEEF 796 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 + G + ++ T SPFA L++ +V E+MY +DA A + +L+ + Sbjct: 797 LAGARSGAVAVTVAHTRVQSPFAADLVWRHVNEYMYLTDAGTV---AGPSGVRPDLVAEV 853 Query: 905 LGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLREL----GPMTVEDLAQRH 960 + + V+ + QRL PG G L + L+E G LA Sbjct: 854 -ARGPSRPAVPQAVVEAYVAKRQRLFPGYAPSGPAELLEWLKERVVVAGDQWQAILAAVA 912 Query: 961 TGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRV 1020 EE A L + +A ++ A + AL + P +V Sbjct: 913 RDHGEEPAVLESALAPKLARLRVPGLAEPLVAALERAPDIARALYGDPALAAPVDPKAKV 972 Query: 1021 SY-----------PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMN 1069 L + +L + ++ +++A + ++ L G ++ Sbjct: 973 PRLAAATAEETAAAREALLVEWLAFYGPLSMDEMAGFLGMPETLLAAVADDLAVAGRWVS 1032 Query: 1070 L------QQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPA 1123 + +W F L + A R + A+ L QG+ Sbjct: 1033 GELVSGREGTLWCDAGSFETLLRLARAARRPGLAALPASRLPYFLARWQGLARPAGD--- 1089 Query: 1124 LFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVI 1183 +G+ +E+LA + L A LWE+ +LPAR R Y LD L T + Sbjct: 1090 ------------AEGLAEHLERLACLPLAAGLWEADVLPARCRAYDPAWLDAALETTGLA 1137 Query: 1184 WSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQ 1243 W G V + + A +A + + Sbjct: 1138 WFGAGP-----KKVLFARPDDLDLAGFSPPAPDPGLFPDPRA---------GYDFSTLLD 1183 Query: 1244 RIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGR 1303 + +AL E LW W+G T + A LR R + T S+ A R Sbjct: 1184 ITG------LSPTALAERLWQAAWKGQATCNSLAVLR---RGVATDFTPEAASYEASRQG 1234 Query: 1304 PVYAQPVSPRVSYNTPNLAGRWS--LLQVEPLND---TERMLALAENMLDRYGIISRQAV 1358 + +P LAG W + P + E + A +L RYG++ R + Sbjct: 1235 RRSLRRTNPARYAAALPLAGSWRQPRVPEPPDDPVAREELAMDRARLLLARYGVVCRDVI 1294 Query: 1359 IAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRH 1418 E P + + R ME SG ++ G F GL G QFA + L A Sbjct: 1295 GREAAPFAWAGIFRALRRMELSGEVVSGEFFAGLSGPQFATGRAVRLL------AEGLPG 1348 Query: 1419 YTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQ 1478 + DPA +WG PA +P R AG+ V +G +L L GG ++ Sbjct: 1349 TDAWWCAGRDPAALWGL---GPAGEGLPLPRRAAGSYVAFAGSSPVLALEAGGGRLSTVL 1405 Query: 1479 EKEELLAPEVFHALTTALRR--EPRLRFTLTEVNDLPVRQTPMFTLLREA 1526 + PE L L R P R + +N P ++P +LR+ Sbjct: 1406 PPDAAALPEALAPLVHLLTRRVRPEARVAVLTINGGPAGESPYVPVLRQV 1455 >UniRef50_D1NRV9 ATP-dependent helicase II n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NRV9_9BIFI Length = 1644 Score = 997 bits (2577), Expect = 0.0, Method: Composition-based stats. Identities = 491/1385 (35%), Positives = 706/1385 (50%), Gaps = 131/1385 (9%) Query: 223 VAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 282 L + T + P+ + Q + + SIWP ++ Sbjct: 317 AMQRLAARKAETAADSPSAQALQAAQRFTAHAAMPAPHHGLPMDASATTQKTFSIWPQVQ 376 Query: 283 TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN 342 +LD +L HR+T+VF NSRG+AE+LTA++N+LYA R+ A+D A + G Sbjct: 377 RSVLDMILEHRTTLVFVNSRGVAERLTAQINDLYAQRVNAGRGDAIDTAWGQHGDGPDEP 436 Query: 343 RVQ--------------SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELG 388 + + +A +HHGSVSK++R E LK G+LRCV+ATSSLELG Sbjct: 437 MHRRSSYGSTSMLVSSPEPEATLAMAHHGSVSKDRRKQIEDDLKRGKLRCVIATSSLELG 496 Query: 389 IDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFA 448 IDMG+VDLVIQ+A PLS++SGLQR+GRA H VGG S +F+P TR+++V + VE M + Sbjct: 497 IDMGSVDLVIQIAPPLSISSGLQRVGRADHTVGGTSHAVFYPLTRQEIVATGTAVEHMRS 556 Query: 449 GRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 G LE N LDVLAQQTVAAA+++ + VD WY+ VR+AAP+ L R VF+ + +L+ Sbjct: 557 GSLEPTMMVRNALDVLAQQTVAAASVEPVSVDTWYALVRKAAPYAGLGRDVFETVIKLLT 616 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGS 568 G Y S +FSAFRP L+ + ++G+++ARPGAQ LAVTSGGTIPDRG+Y+V+LPE + G Sbjct: 617 GAYNSEEFSAFRPPLMLDEDSGMISARPGAQRLAVTSGGTIPDRGLYTVVLPEAQAGKGP 676 Query: 569 RRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRP 628 +RVGELDEEMVYE+RV DIITLG ++W++Q+IT D+V+V PAPGRSARLPFW G+ GR Sbjct: 677 KRVGELDEEMVYETRVGDIITLGTSTWQVQEITNDRVVVIPAPGRSARLPFWHGDQAGRS 736 Query: 629 AELGEMIGDFLHLLADGAFFS----------------GTIPPWLAEENTIANIQGLIEEQ 672 G ++H + G + + ++N I ++ G + +Q Sbjct: 737 YTFGLAQAQWMHDMNAGFLAATNNGTATEPTFNDETLERLHNDGFDDNAINDLAGFLADQ 796 Query: 673 RNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVV 732 R AT ++P + +V+ER R E GDW +++HS GRRVHEPWA+AI R+ +G + Sbjct: 797 RAATTVIPDATRIVVERTRSEEGDWTVLIHSQLGRRVHEPWALAINARLQQRYGFSGQIF 856 Query: 733 ASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPG 792 A+DDGIV R+PD DG + F+ + L +IV E VG S LFA+RFRE AAR+L MP Sbjct: 857 AADDGIVIRLPDGDGTIDVIGSIRFDVDDLNRIVTEQVGGSVLFASRFREVAARSLFMPR 916 Query: 793 RTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGE 852 PG R PLWQQRLRASQLL A+ DFP+I+ET RECLQDVYDLPAL +M R+ G+ Sbjct: 917 MNPGKRVPLWQQRLRASQLLAAARPIKDFPLIMETTRECLQDVYDLPALREVMGRIGAGQ 976 Query: 853 IQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGE 912 I I +VTT PSP A +L+FG+V MY+ D PLAER +LS+D +L LLG+ D Sbjct: 977 IMIDEVTTDYPSPMAENLMFGFVGSVMYEGDTPLAERNTQLLSMDPAMLEQLLGEADYAS 1036 Query: 913 LLDPQVIRQVEEELQRLAPGRRAKGEE---GLFDLLRELGPMTVEDLAQRHTGSSEEVAS 969 +LD + I + L+ ++ + + P T + +E Sbjct: 1037 VLDSESIDETARALEGRTFWNALDEQDITGRVSRYAKTHAPFTAAQMIADLNIDAEAAVR 1096 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFL 1029 L+ L + + + + + VS FL Sbjct: 1097 ALDALKERGEVLQGRFDARMSEDVEQWVHQSVFRMIRSRSLRRARAAIRPVSAADYQRFL 1156 Query: 1030 RYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSL 1089 L+ V ++ V L+Q + L +W + R+R + Sbjct: 1157 LDLQGVGPVGGQRHDDTEG-----VLRVLEQCEG----VELPLHVWEGSVLPARVRNYT- 1206 Query: 1090 QAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGV 1149 L+LE V + + + S + V EQ Sbjct: 1207 -----------HAMLDALVLEGTVVWVMGERGVRWYPADSVQLASWAARVHEQAEQAGSA 1255 Query: 1150 GLPASLWESQILPARVRDYSSEMLDELLAT---GAVIWSGQKKLGEDDGLVALHLQEYAA 1206 A L S LD ++A G W+G + E A Sbjct: 1256 DTDADL--------------SSALDSVVAGESNGE--WNGDGE------------TEVQA 1287 Query: 1207 ESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDL----------- 1255 AD RS L +AI+AVLA GGA+ A Q++ + ++ + + Sbjct: 1288 WL-----ADDTCRS-LCRAILAVLAQGGAYGASQLADLVNERWMDVCEPLVDDGTGELVM 1341 Query: 1256 -----SALQEALWALVWQGVITSDIWAPLRA-----------LTRSSSNARTSTRRSHRA 1299 +++LW LV QG++T+ +RA ++ ++ + R +H Sbjct: 1342 PAWTMERFEQSLWRLVRQGLVTNSALEAVRAHETADAGTSSAGGAAAGRSKAAARSAHSV 1401 Query: 1300 RRGRPVYA-QPVSPRVSYNTPNLAGRWSLLQVE-----PLNDTERMLALAENMLDRYGII 1353 R R V + + P T LAG W L+ + ++ +R + L E +LDRYG I Sbjct: 1402 RSMRSVRSIRHRLPARMPQTKTLAGLWRLVTGDQELAAEVSAEQRTIDLVEMLLDRYGPI 1461 Query: 1354 SRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQA 1413 + V +PGGF S+ + ME+ G ++RG FVEG G AQFA R T+D LR + Sbjct: 1462 APALVDMAGVPGGFSSLYPVLTRMEERGLLVRGMFVEGFGAAQFAVRDTVDVLRGI---- 1517 Query: 1414 TQTRHYTPVALSANDPANVWGNLLPWPAHPATL-VPTRRAGALVVVSGGKLLLYLAQGGK 1472 + T H V L+A DPA ++G +PWPA P P R+ G+LVV+ G +++ A GK Sbjct: 1518 SATTHAHAVVLNAIDPAVLYGAAVPWPALPDDAGKPLRKDGSLVVLRDGVPIVFAALRGK 1577 Query: 1473 KMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVR-QTPMFTLLREAGFSSS 1531 +++ + E LL L + T T N P+R P+F LR AGF+ + Sbjct: 1578 RLMAFSTVESLLESACA-ELAYQCHQTLGAPVTFTVCNAQPIRVGQPIFHALRAAGFTPT 1636 Query: 1532 PQGLD 1536 PQG+ Sbjct: 1637 PQGMK 1641 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 140/267 (52%), Positives = 170/267 (63%), Gaps = 26/267 (9%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 S L F+ T+ WF + F +PT VQ Q W + LVIAPTGSGKTLAAFL ALD Sbjct: 2 SELMQGFTQQTQRWFEQTFGKPTDVQRQAWPLIRSGADTLVIAPTGSGKTLAAFLAALDT 61 Query: 69 LFREG--------------------------GEDTREAHKRKTSRILYISPIKALGTDVQ 102 + E +++ K K R+LYISP+KALG DV Sbjct: 62 IMCERARSVSGAVQPRIDHVDLVEDAPQTAKPARSKQRAKTKGVRVLYISPLKALGVDVA 121 Query: 103 RNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML 162 +NL +PL+GI+DE G +RV +R+GDT A+ R+ +TR PPDIL+TTPESLYLML Sbjct: 122 KNLDLPLRGISDEYAAEGLEVPEVRVAMRSGDTDAKARAAITRRPPDILVTTPESLYLML 181 Query: 163 TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASD 222 TS+ARE LR V+TVIIDEVHAVAG+KRG+HLALSLERLDALL AQRIGLSATV + Sbjct: 182 TSKAREILRHVDTVIIDEVHAVAGTKRGSHLALSLERLDALLEHPAQRIGLSATVHPMEE 241 Query: 223 VAAFLGGDRPVTVVNPPAMRHPQIRIV 249 AAFLGG RPV +VN +R+V Sbjct: 242 TAAFLGGSRPVQIVNAAGAPSVDLRVV 268 >UniRef50_D2MKC9 DEAD/H associated domain protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKC9_9BACT Length = 1346 Score = 955 bits (2469), Expect = 0.0, Method: Composition-based stats. Identities = 371/1260 (29%), Positives = 562/1260 (44%), Gaps = 154/1260 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + F P WF + PT VQ +W EHAL+ APTGSGKTLAAFL ++D LF++ Sbjct: 17 ESFHPIIARWFRDSIGTPTDVQTASWPALCSGEHALIAAPTGSGKTLAAFLASIDSLFQQ 76 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + ++ILY+SP+KAL DVQ+NL+ PL I+ G +RV +RT Sbjct: 77 ALSN----DLANHTQILYVSPLKALSNDVQKNLRRPLSEISGNALEAGLLLPEIRVEVRT 132 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP + R + R PP ILITTPESL+L+LT ++RE LR + TVI+DE+HA+AG+KRG+ Sbjct: 133 GDTPTKTRQDMLRRPPHILITTPESLFLLLTARKSREILRTIRTVIVDEIHALAGNKRGS 192 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 H+ALSLERLDA+ H RIGLSAT + +A FL G + + P +V Sbjct: 193 HVALSLERLDAIAHVKPNRIGLSATQKPLEAIARFLTGGTSHISEDQAPIWTPTSCHLVD 252 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + ++ ++ A +IW + + + V HRST+VF N+R LAE++ + Sbjct: 253 MGQRREMDLAIETPRDELGAIATNAIWADVYDRLTELVQTHRSTLVFVNTRRLAERIAHQ 312 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L + L +HHGS+S++ R E+ L Sbjct: 313 LTDRLGEDL-------------------------------VAAHHGSLSRKMRLWAEERL 341 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K G+ R V+AT+SLELGID+G VDLV QV +P ++A+ LQR+GRAGH V + KG Sbjct: 342 KKGQTRVVIATASLELGIDIGFVDLVCQVGSPRAIATCLQRVGRAGHWVDAIPKGRLLCT 401 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 TR +LV+ A ++ + G L+ + P +P D+LAQQ +A + VD Y + +A P Sbjct: 402 TRDELVECAALIRAIHLGHLDQILVPQDPKDILAQQLIAEVSAQEWPVDSLYQQYTQAYP 461 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++ L R FD + +++ + S + L +R L AR GA+L A+TSGG IPD Sbjct: 462 YRHLTRTAFDEVVTLVTQGWTSNRGKQ-QALLFHDRAQNRLRARRGARLAAITSGGAIPD 520 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y+V+ VG +DE+ ES DII LG TSWRI+ + + V A Sbjct: 521 TATYAVIAEPQ-----GNTVGSVDEDFAVESLAGDIILLGNTSWRIRGVETGVMRVEDAH 575 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAF------------------FSGTIP 653 G +PFWRGE R EL + + + + D Sbjct: 576 GAPPTIPFWRGEAPSRTFELSQEVAELRQAVVDRLTPPTSTSPATSGQDPHDHILRWFES 635 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 A+ I + + G VP R ++ ER DE G ++++HSP+G R++ W Sbjct: 636 ECGADRRATEQILAYHQSGVHMLGAVPTQRTIIAERFFDEAGGMQLVIHSPFGGRINRAW 695 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 +A+ R + + A+D+G+V + + + L + +++ +AV S Sbjct: 696 GLALRKRFCVSFDFELQAAATDEGLVLSLGERHSFPLETVWSLLRSSNVREVLTQAVLQS 755 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIA---------------QGY 818 +F AR+R +RAL + G R PL QR+RA LL Sbjct: 756 PMFMARWRWNVSRALAVLRFRNGKRVPLHLQRMRAEDLLTAVFPMATACQDNRPPGNIDV 815 Query: 819 PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEF 878 P P++ ETLR+CL++ ++ L L++R+ G++ + + TPSPF+ +L F Sbjct: 816 PSHPLVQETLRDCLEEAMNIDGLTVLLQRIERGDVHCLSIESPTPSPFSHEILNANPYGF 875 Query: 879 MYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGE 938 + DAPL ERR+ +S+ L + LD I V +E R + Sbjct: 876 L--DDAPLEERRSRAVSMRHILPP---AEAATMGALDADAIEAVCQEAW-----PRVRDA 925 Query: 939 EGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERL--ACMDD 996 + L + L L + E ++L +LL R + R + Sbjct: 926 DELQEALHL--------LTWVPENHAAEWRAFLPDLLDSGRALVLSHTDPTRDSTVSIWT 977 Query: 997 AARLRDALGVRLPESLPEIYLH------------RVSYPLRDLFLRYLRAHALVTAEQLA 1044 L LP H + ++ TA +LA Sbjct: 978 TPDHLSLLATILPHLAAHPDAHQCESRSSPVFSGDEQEARTTIVRSWMEVIGPTTARELA 1037 Query: 1045 HEFSLGIAIVEEQLQQLREQGLVMNLQQD------------------------------- 1073 + L+QL QG ++ Sbjct: 1038 ATLRWPATTTQTALEQLEAQGQILQGTFRPRVRHVPSSASGLETEPHLSFRGSEQEHDSK 1097 Query: 1074 ---IWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSP 1130 W + R+ R++ R + V+A+ + R L Q V P Sbjct: 1098 PEIEWCDRRLLARIHRRTVLTLRREVQTVSASDFMRFLFRWQHVAPTA------------ 1145 Query: 1131 GVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKL 1190 G G+ ++EQLAG AS WE +L +R+ DY + LD L G + W + Sbjct: 1146 -RLHGEPGLRTILEQLAGFEAAASAWEPHLLRSRMADYRPDTLDYLCLRGIITWGRLTQP 1204 >UniRef50_A0LV08 DEAD/H associated domain protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LV08_ACIC1 Length = 1534 Score = 921 bits (2380), Expect = 0.0, Method: Composition-based stats. Identities = 490/1071 (45%), Positives = 659/1071 (61%), Gaps = 55/1071 (5%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F+P R WF F PTA Q + W V A +HAL+IAPTGSGKTLAAFL+++ RL E Sbjct: 2 FTPLLRRWFTTTFGAPTAAQAEAWRVIAGGDHALLIAPTGSGKTLAAFLWSIHRLLTEPR 61 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +R+LY+SP++AL D++RNL+ PL I G ++R+G+RTGD Sbjct: 62 ------AEPPAARVLYVSPLRALAADIERNLRAPLTAIRRLATETGVQLPDIRIGVRTGD 115 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 TP+ +R L +NPPDILITTPESL+L+LTS+AR+ LRGV+TVIIDE+HA+AG+KRGAHLA Sbjct: 116 TPSAQRRALVKNPPDILITTPESLFLLLTSQARDMLRGVDTVIIDEIHALAGNKRGAHLA 175 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 LS+ERL+ALL AQRIGLSATVR ++ A FLGG RPV V++P A + IR+ VPVA+ Sbjct: 176 LSMERLEALLRRPAQRIGLSATVRPPAEAARFLGGGRPVRVIHPSARKELDIRVSVPVAD 235 Query: 255 MDDVSSVASGTGE--DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 M G + D+ SIWP+I T ++D + HRSTIVFTNSR LAE+LTA+L Sbjct: 236 MTSPPDPPPGAADEPDADTPARSSIWPHIVTRLVDLITAHRSTIVFTNSRRLAERLTAQL 295 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 N+ A R AR+HHGSVS+EQR +TE+ LK Sbjct: 296 NDEAARRGIPGEL--------------------------ARAHHGSVSREQRHVTEELLK 329 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 SG + VVATSSLELGIDMGAVDLV+ P SVA+ +QR GRAGHQ VS+G+ FP+ Sbjct: 330 SGRIPAVVATSSLELGIDMGAVDLVVHAEPPPSVAAAMQRFGRAGHQRDAVSRGIIFPKH 389 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPW 492 R L+ +AV+VE M GR+E + P NPLDVLAQQ VA AA D D+ ++ VRRAAP+ Sbjct: 390 RSQLIPAAVVVERMRDGRIEAVRVPENPLDVLAQQLVAMAATDDWSDDDMFTLVRRAAPF 449 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDR 552 L VFDA L ML+GRY S DF+ F+ ++ W+R +G +TARPGA+LLAVT+ GTIPDR Sbjct: 450 HTLRPNVFDAVLAMLAGRYASDDFAQFKARIDWDRSSGRVTARPGARLLAVTNAGTIPDR 509 Query: 553 GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPG 612 G Y+V+L ++ RVGELDEEMVYESR + TLG+ WRI IT D+V+V PAPG Sbjct: 510 GQYTVVLAGADKPT---RVGELDEEMVYESRPGTVFTLGSAQWRIVDITADRVVVVPAPG 566 Query: 613 RSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIANIQGLIE 670 +A PFW G+ RP +LG IG+ L +L+ D + + +E + N + Sbjct: 567 AAAIPPFWHGDAPARPFDLGRAIGETLRVLSSTDQVTATAALRDAGFDELAVNNALRYLA 626 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 +QR ATG+VP + +V+E RDE+GDWR+++HSP+G +VH PWA+AIA RI +G + + Sbjct: 627 DQRAATGVVPDDQTIVVEWFRDEVGDWRLVVHSPFGGQVHAPWALAIAARIRQRYGIETA 686 Query: 731 VVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 V+ +DDGIVAR+P D PD + +P++ +R + +SALFAA+FRECAARALL+ Sbjct: 687 VMHADDGIVARLPAADR-PPDLDLVTIDPDEAADAIRGELTNSALFAAKFRECAARALLL 745 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNG 850 P R P RTPLWQQR RA+QLL A PDFP++LE +REC +V+D+P L+R++R + Sbjct: 746 PRRFPQRRTPLWQQRQRAAQLLSAAVDLPDFPIVLEAVRECWHEVFDVPGLQRILRDIAA 805 Query: 851 GEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDP 910 I + V T PSPFA SLLFGY+A ++Y++D P AER+ L+LDS LL LLG+ D Sbjct: 806 HRIAVVGVETPVPSPFARSLLFGYLAAYLYENDVPPAERKVHALALDSALLTQLLGEHDF 865 Query: 911 GELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASY 970 E+LDP ++ VE+EL L ++ + GP + DLA ++ + Sbjct: 866 AEILDPGIVAAVEQELASLPQSPTPTLDDAVRAFAARRGPFSRRDLAAALAADDRQLDAV 925 Query: 971 LENLLAVKRIFPAMISGQERLACMDDAARLR-----DALGVRLPESLPEIYLHR---VSY 1022 L++ + + +G+ A + R R A +P +L V Sbjct: 926 LDHFVTTGVLVR-SGAGEYCDADILRTLRRRSLAKLRAEIEPVPARAFARFLPSWQHVRR 984 Query: 1023 PLRDLFLRYL---RAHALVTAEQLAHEFSLGIAIVE---EQLQQLREQGLV 1067 PL + Y + + L I L +L G V Sbjct: 985 PLTGVDGLYAVIEQLRGARLPASELEQAILARRIAGYHPALLDELTASGAV 1035 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 172/557 (30%), Positives = 234/557 (42%), Gaps = 60/557 (10%) Query: 996 DAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVE 1055 D A + D V E + L D + + LA + ++ Sbjct: 864 DFAEILDPGIVAAVEQELASLPQSPTPTLDDAVRAFAARRGPFSRRDLAAALAADDRQLD 923 Query: 1056 EQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVL 1115 L G+++ + ++ R LR RSL R PV A +AR L Q V Sbjct: 924 AVLDHFVTTGVLVRSGAGEYCDADILRTLRRRSLAKLRAEIEPVPARAFARFLPSWQHVR 983 Query: 1116 PATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDE 1175 GVDG+ VIEQL G LPAS E IL R+ Y +LDE Sbjct: 984 RP---------------LTGVDGLYAVIEQLRGARLPASELEQAILARRIAGYHPALLDE 1028 Query: 1176 LLATGAVIWSGQKKL-----------------GEDDGLVALHLQEYAAESFTPAEADQAN 1218 L A+GAV W+G G DG + L + AA P Sbjct: 1029 LTASGAVTWTGAGARTGSGTRGAGARSGAGTNGPADGWIVLCPTDAAASLLPPPMPLD-E 1087 Query: 1219 RSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAP 1278 L + +V +LA GA F + I+ R+R +D L+ ALW LV+ G +T+D AP Sbjct: 1088 LPVLHRHVVDLLASSGALFFRTIADRVR-----CLDDQELERALWDLVFAGWLTNDTLAP 1142 Query: 1279 LRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTER 1338 LRA +R R +R G P AGRWSL+ ++ R Sbjct: 1143 LRARLTQRPGSRPRGRPILPSRLG---------------PPTAAGRWSLIGARESDEERR 1187 Query: 1339 MLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFA 1398 ALA+ +LDRYG+ +R V AEN+ GGF + + +ME +G RG FV LGGAQF Sbjct: 1188 ARALAQALLDRYGVAARPVVEAENVRGGFGGIYPVLATMEAAGACRRGYFVTALGGAQFG 1247 Query: 1399 ERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVV 1458 ID LR A P+ L+A DPAN +G LPWP + RR A VV Sbjct: 1248 VSGAIDALR-----AANRETAGPLVLAAADPANPYGAALPWPEGSSG-RVGRRPEAWVVT 1301 Query: 1459 SGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTP 1518 G +LY+ GG+ + V + L + ++R R L VN P+ TP Sbjct: 1302 VDGAPVLYVESGGRGIDVLTADADALLAAIEAL-AASVRAGETGRLQLERVNGRPILGTP 1360 Query: 1519 MFTLLREAGFSSSPQGL 1535 + LR+ GF +P GL Sbjct: 1361 LAETLRDKGFRPTPPGL 1377 >UniRef50_C5AJ01 DEAD/H associated domain protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AJ01_BURGB Length = 1632 Score = 874 bits (2258), Expect = 0.0, Method: Composition-based stats. Identities = 368/1403 (26%), Positives = 536/1403 (38%), Gaps = 248/1403 (17%) Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 +V V + + +W + I + HR+T+VF N+R +AE+L Sbjct: 326 IVDVGHARERDLALELPPVPLEPVMANDVWERVYDRIAELAAGHRTTLVFVNTRRMAERL 385 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L E L +HHGS++KE R E Sbjct: 386 ARHLGERLGHDL-------------------------------IAAHHGSLAKESRFDAE 414 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 Q LK G L+ +VAT+SLELGID+G V+LV Q+ +P +A LQR+GR+GHQVGG KG Sbjct: 415 QRLKHGRLKLLVATASLELGIDIGEVELVCQIGSPRGIAPFLQRVGRSGHQVGGTPKGRL 474 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA E + R Sbjct: 475 FPLSRDELVECAALLDCVARGELDRLRVPRAPLDVLAQQIVAEVTCAEWDETELWRRFTH 534 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 AAP+ DL R FD L ML+ + S R L +R TG + AR GA+L AVTSGGT Sbjct: 535 AAPYADLSRERFDEVLAMLAEGFSSRRGPR-RAYLHRDRSTGTVRARRGARLTAVTSGGT 593 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPD Y+VLL + +G ++E+ ES D+ LG S+RI ++ +V V Sbjct: 594 IPDNADYTVLLEPQGTQ-----IGTVNEDFAVESLAGDVFQLGNQSYRILRVETGRVRVE 648 Query: 609 PAPGRSARLPFWRGEGNGRPAE-------LGEMIGDFLHLLAD----------------- 644 A G++ LPFW GE GR E L I L Sbjct: 649 DARGQAPNLPFWLGEAPGRSDELSAGVARLRAQIDALLEQGELDAARPAASRAIDTARAG 708 Query: 645 -------------------------------GAFFSGTIPPWLAEENTIANIQGLIEEQR 673 + + I + R Sbjct: 709 RRAAHASPPAHPAAAGAGAADPAPELAPSRLAPALAWLTGSLGLPDEAARQIVEYLARAR 768 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 A G +P LV+ER DE G ++++HSPYG R++ W +A+ R + + A Sbjct: 769 AALGALPTRDTLVMERFFDESGGTQLVIHSPYGTRINRAWGLALRKRFCRAFNFELQAAA 828 Query: 734 SDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 +DD I+ + + ++ +A+ + LF R+R A +L +P Sbjct: 829 TDDAIILSLSLAHSFVLSDVWRYLRTATAEHVLVQALLDAPLFGVRWRWNATTSLALPRY 888 Query: 794 TPGHRTPLWQQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLP 839 T G RT QR+++ LL + P P++ +TL +CL + D Sbjct: 889 TGGRRTAPQLQRMKSEDLLATVFPDQVACAENLVGEREVPRHPLVDQTLDDCLHEALDTE 948 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 L+ R+ GEI++ PSP A +L F+ DAPL ERR + Sbjct: 949 GWLALLARIEAGEIELIARDLPAPSPLAAEILNAKPYAFL--DDAPLEERRTQAVLARRW 1006 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 D LD I V E+ + + + D L L ++ E+ Sbjct: 1007 TDPE---SADDLGALDADAIDAVREQAW-----PAVRDADEVHDALTSLACVSDEEARAH 1058 Query: 960 HTGSSEEVASYLENLLAVKRIF--PAMISGQERLACMDDA---ARLRDALGVRLPESLPE 1014 H + +A R+ A+ G ER+AC+ ARL AL P Sbjct: 1059 HGWLAALTKLAAARRVAALRLADGRALWLGAERVACLRALHPEARLEPALAAPERGGTP- 1117 Query: 1015 IYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQ-- 1072 L D+ L + A +A L A VE L L +G VM + Sbjct: 1118 ---WTADTALLDVIRARLTGFGPLPAAAIAAPLGLPQAAVEAALVALESEGYVMRGRFTP 1174 Query: 1073 ----DIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFAST 1128 + W + R+ +++ R PV + R L Q + T G Sbjct: 1175 GALAEEWCERHLLARIHRYTVKRLRREIEPVERADFMRFLFHWQHLSADTRGM------- 1227 Query: 1129 SPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQK 1188 G + + VIEQL G A WE +LPARV DY++ +DEL +G V+W+ Sbjct: 1228 ------GREALAAVIEQLEGFEAAAGAWEDDLLPARVADYATGGIDELCRSGRVVWTRIA 1281 Query: 1189 KLGEDDG-------------------------------LVALHLQEYAAESFTPAEADQA 1217 G +V L + A E Q Sbjct: 1282 PPARSPGERAPAADAGAGGGRGPRGAAKTAAGPLKTTPIVLLPRRNVGAWQALHDERAQP 1341 Query: 1218 NRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWA 1277 SA Q + LA GA F ++ R + L++AL LV G + +D +A Sbjct: 1342 ALSARAQRVHDALAAHGAMFFDELVDDAR------LLPVELEQALGELVAAGRVNADSFA 1395 Query: 1278 PLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPL---- 1333 LRAL R + + S S R RRG + + AGRW+L++ Sbjct: 1396 GLRALLRPA--VKRSAYYSPRTRRGGALI----------GGMDDAGRWALVRRPVPVTAA 1443 Query: 1334 ------------------------------------NDTERMLALAENMLDRYGIISRQA 1357 E + +A +L RYG++ + Sbjct: 1444 AGAEADAAAAHRDGIDGAGGEPLARAGTSRTSAAGPAPREALEHIAWTLLRRYGVVFWRL 1503 Query: 1358 VIAEN-IPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQT 1416 + E + + + + +E G I GRFV GL G QFA I LR+L Q Sbjct: 1504 LEREAAWLPPWRDLLRVYQRLEARGEIRGGRFVAGLAGEQFALPEAIPVLRELRRQPADG 1563 Query: 1417 RHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLV 1476 +S DP N+ G LLP A AG V+ G + L G Sbjct: 1564 ---QWTVVSGADPLNLAGTLLPGRKVAAL------AGNRVLYRDGVAVAALVGG-----E 1609 Query: 1477 WQEKEELLAPEVFHALTTALRRE 1499 + ++ L A E A RR Sbjct: 1610 FVYEDALCAAEHETARVKLARRR 1632 Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats. Identities = 103/219 (47%), Positives = 132/219 (60%), Gaps = 3/219 (1%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 F PA WF F PT Q + W + LV APTGSGKTL AFL A+D L R+ Sbjct: 16 FHPAVAGWFAHTFAAPTGAQARAWPLIKAGRSTLVAAPTGSGKTLTAFLCAIDDLVRDA- 74 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + ++Y+SP+KAL D++ NL PL GIA E RRG +R +RTGD Sbjct: 75 -LAHDGMLPDATLVVYVSPLKALSNDIRVNLDAPLAGIARELARRGLPVPEIRTAVRTGD 133 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T ER+ + P IL+TTPESLY++L+S R L V T I+DE+HA+AG+KRG+HL Sbjct: 134 TTPAERNAQRKRAPHILVTTPESLYVLLSSESGRRMLSTVRTAIVDEIHALAGNKRGSHL 193 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP 232 +L+LERLDAL+ RIGLSAT R VA FL G + Sbjct: 194 SLTLERLDALVGRPLPRIGLSATQRPIGLVARFLVGGKD 232 >UniRef50_D2LLH6 DEAD/H associated domain protein n=3 Tax=Aciduliprofundum boonei T469 RepID=D2LLH6_9EURY Length = 1688 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 293/960 (30%), Positives = 478/960 (49%), Gaps = 92/960 (9%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +F P +WF + + T Q + ++ LV +PTGSGKTL AF+ ++ LF Sbjct: 16 LFDPIIGEWFTSKYSELTEPQAYAIPLIHSGKNVLVSSPTGSGKTLTAFISIINELF--- 72 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 +E +Y+SP+KAL D+ RNL++PL+ I D + +G +RV +R+G Sbjct: 73 -LLAKEGKLEDKVYCVYVSPLKALANDIHRNLEVPLEEIKDLAKSKGVKIPKIRVAVRSG 131 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT ER K+ R PP I ITTPESL L+LT + RE+ R V VI+DE+H +A +KRG Sbjct: 132 DTSTAERQKMLRKPPHIFITTPESLSLVLTAPKFRESFRDVRYVIVDEIHELANNKRGVM 191 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIR 247 L+L+LERL L + QRIGLSAT ++A +L G R V++V + ++ Sbjct: 192 LSLNLERLQYLA-KNFQRIGLSATQAPIEEIAKYLVGYEGEEPRNVSIVEVEVRKKLDLK 250 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 ++ PV ++ V + ++D + RHR+T++FTN+R E Sbjct: 251 VITPVEDLTLVP--------------YEVANEKMYDVLVDIINRHRTTLIFTNTRSGTEH 296 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + +L E L+ +HHGS+SKE R Sbjct: 297 VAYKLKEKGIENLE--------------------------------AHHGSLSKETRLRV 324 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ALK G+L+ V++++SLELGID+G +D+V+Q+ +P S+A GLQRIGR+GH G +KG Sbjct: 325 EKALKEGKLKAVISSTSLELGIDIGYIDVVVQIGSPKSIAKGLQRIGRSGHAYGATAKGR 384 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 F +L++ +V+C + G+++ + P N LDVL+Q V + VDE Y+ +R Sbjct: 385 FLVFDNDELIECTTLVKCAYDGKIDRVRIPKNSLDVLSQIIVGMSIEKRWNVDEAYNIIR 444 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + + +LP+ F L L G Y GD K+ ++ E + + ++++ + G Sbjct: 445 SSYCYHELPKEKFIQVLRYL-GGYVLGD--TVYSKIWFDEEDMVFGRKRSSRMIYFMNMG 501 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPD Y V+ +R+G L E+ V + + D+ LGA S+ + I +V+V Sbjct: 502 TIPDEADYLVI------DHEGKRLGSLSEKFVEKLQKGDVFVLGARSYEVLSIRTGKVVV 555 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFL-------HLLADGAFFSGTIPPWLAEEN 660 A G+ +P W GE R +L +G F + + + + Sbjct: 556 KDATGKRPTVPSWVGEMLPRSFDLSVEVGKFREFVEKNIRERGEKKTIEILMKDYYLDYR 615 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 +I I++ + IVP + +V+E D G II H P+GRRV++ + A A + Sbjct: 616 GARSIVSYIKQGMHH--IVPTHKRVVIEGYVDPAGKHNIIFHYPFGRRVNDALSRAYAFK 673 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 I +G + + +DD + + + L +++ +R A+ ++ LF RF Sbjct: 674 ITEKYGVNVGISITDDAFMLTL--KRRIRLEDIKNLLSSDEIEDALRRAIFNTELFKQRF 731 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 R CA+R+ ++ R G + +Q+LR+ ++L + PDFPV+ ET E V DLP Sbjct: 732 RHCASRSFMVLRRYKGRDISVARQQLRSDKILRLLSEIPDFPVMEETYNEIFNIVMDLPH 791 Query: 841 LERLMRRLNGGEIQISDVT-TTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 + ++R++ GEI++ V + TPS FA S++ + SD L E R+++L E Sbjct: 792 AKEVLRKIENGEIEVKIVPYSDTPSIFAHSIILSGI------SDIVLMEDRSALL---KE 842 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQR 959 L LL +V + + + + +E Q A + G D+LR L D+ +R Sbjct: 843 LHMKLLERV-----IPKEELAAMFDEAQVSAYFQNKIKVRGKEDILRFLDLAPGTDVLRR 897 >UniRef50_Q8U202 Large helicase-related protein n=3 Tax=Thermococcaceae RepID=Q8U202_PYRFU Length = 866 Score = 828 bits (2138), Expect = 0.0, Method: Composition-based stats. Identities = 276/909 (30%), Positives = 426/909 (46%), Gaps = 65/909 (7%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A + + P +WF R F+ T Q + E+ L+ +PTGSGKTL+A Sbjct: 7 AKREYSDEEIFKILDPIVGEWFRRKFRTFTPPQRYAVIEIHKGENVLISSPTGSGKTLSA 66 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL + L G R+ +Y+SP++AL D++RNLQ PL+ I + R+ G Sbjct: 67 FLSIISELISLG----RQGKLEDKIYCVYVSPLRALNNDIRRNLQEPLQEIYELARKLGV 122 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDE 180 +RV +RT DT + E+SK+ + PP ILITTPESL + L + RE LR V+ VI+DE Sbjct: 123 EIPEIRVSVRTSDTTSYEKSKMLKKPPHILITTPESLAIALNAPKFREKLRDVKWVIVDE 182 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 VHA+A +KRG+HLAL+LERL L RIGLSAT+ +VA F V Sbjct: 183 VHALAENKRGSHLALTLERLRELTGREFVRIGLSATIHPLEEVAKF--------VFGFDD 234 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P+ ++V V+ + ED + + I + V ++T++FTN Sbjct: 235 NGEPRPGLIVDVSFAKKIKISVESVVEDLVYTPANVLSEALYRRIGELVKNRKTTLIFTN 294 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R E++ L +++ +HH S+S Sbjct: 295 TRSGTERVVYHLKKMFPE-----------------------------WADKIEAHHSSLS 325 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 +E R E+ LK GEL+ +V+++SLELGID+G++DLVI + +P SV LQRIGRAGH++ Sbjct: 326 REVRLNVEERLKRGELKIIVSSTSLELGIDIGSIDLVILIGSPKSVNRALQRIGRAGHRL 385 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 VS+G+ R DLV+ V+ RL+ + P NPLDVL Q + A +V+ Sbjct: 386 HEVSEGVILALDRDDLVEVTVLAHNARNRRLDRIKIPKNPLDVLVQHVLGMALERVWEVE 445 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQ 539 E Y VRRA P++DLP F L L+G Y + K+ E G R + Sbjct: 446 EAYRVVRRAYPFRDLPFEDFMNVLRYLAGEYAGLEEKKVYAKIWL--EDGKFGRRGKMTR 503 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 + + GTIPD V + + +G ++EE DI L ++ + Sbjct: 504 AIYYMNVGTIPDEAKIDVFTMDMKY------IGTVEEEFAEHLMPGDIFVLAGRTYEFVK 557 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPW 655 +++ V P G +P W E +L I F L + + + + Sbjct: 558 SKGNRIYVIPREGAKPTIPSWFSEMLPLSFDLAIDIQRFRKEVKRLLNNKRAKTFLMRKY 617 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAV 715 +E T I EQ + I+P +++E R E + H+ GRR ++ + Sbjct: 618 GIDETTANAILSYFREQAKYS-IIPDDETVLVEVVR-EGNVVKYFFHTLIGRRANDALSR 675 Query: 716 AIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSAL 775 A A I + V +D+G + ++P + + LF E L +++++A+ ++ L Sbjct: 676 AFAYLISKRKKCNVGVAITDNGFMLKVPREKELSQEEILELFRVENLREVLKKALDNTEL 735 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQG-YPDFPVILETLRECLQD 834 RFR A R LL+ R G L +Q++ A LL + YPDFP++ E RE ++D Sbjct: 736 LKRRFRHVANRGLLVLRRYMGREKSLSRQQMNAQTLLNFLKKNYPDFPLLKEVYREIMED 795 Query: 835 VYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAE-RRASV 893 D+ E + + G I++ PSPFA +L E SD L E RR + Sbjct: 796 KMDIGNAELFLGWIKEGRIEVIIREHKYPSPFAFNL------EVAGASDVVLMEDRRELI 849 Query: 894 LSLDSELLR 902 L +++ Sbjct: 850 KELHKKIMA 858 >UniRef50_C7DIU9 DEAD/H associated domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIU9_9EURY Length = 898 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 280/947 (29%), Positives = 450/947 (47%), Gaps = 102/947 (10%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 P S V + TR WFL FK+ T Q ++ + A ++ L+ APTGSGKT++A Sbjct: 5 TSTPFEDSKSLGVLNTYTRKWFLENFKELTPPQKFSFKLIAEKKNVLITAPTGSGKTMSA 64 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 F+ + LF + + T +YISP+KAL D+ RNL PL I + ++ Sbjct: 65 FVSVISALF----DKALKGELEDTVYCIYISPLKALNNDIYRNLVKPLTEIYETIKKEKG 120 Query: 122 TEV------NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVE 174 ++ + +G+RTGDT ER K PP+IL+TTPESL +++ S R E L+ VE Sbjct: 121 VDLIKENIREVTIGVRTGDTLQSERRKQLIKPPNILVTTPESLAILINSERYVENLKHVE 180 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GG 229 +IIDE+H +A +KRG HL+LS+ERL L+ + RIGL AT+ + A FL G Sbjct: 181 YIIIDELHELANNKRGVHLSLSVERLQELIGHNLIRIGLGATLYPLEEAAKFLVGYDNGA 240 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 R TVV+ + +I+++ PV +M +V +E +I + I + Sbjct: 241 PRDCTVVDASWSKSIEIKVMSPVVDMINV--------------QENAIEDSMYKMINGAI 286 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV 349 +ST++FTN+R E++ L + + Sbjct: 287 GASKSTLIFTNTRSGTERVVFNLKKRFGYSDT---------------------------- 318 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASG 409 +HHGS+S+E R E+ LK G L+C V+++SLELGID+G +DLVIQ+ +P SV Sbjct: 319 --IAAHHGSLSRESRLEVEELLKKGALKCAVSSTSLELGIDIGTIDLVIQLGSPKSVTRS 376 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 +QRIGRAGH +KG R DLV+ ++ + L++ + P N LDVL+Q V Sbjct: 377 VQRIGRAGHSYKSTAKGDVIVLNRDDLVECTIMADAALKKHLDSFSTPQNALDVLSQHIV 436 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 + DE Y+ V+RA P+ +L F + + LSG Y + K+ ++ + Sbjct: 437 GMSITRKWNADEAYALVKRAYPYHNLEEGDFYSIIKYLSGSYVDLESRRVYGKIWYDEKE 496 Query: 530 GILTAR-PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDII 588 + R A+L+ + + GTIPD +V L ++ +G ++EE + + DI Sbjct: 497 NMFGRRGKYAKLIYMLNLGTIPDEVAINVFLA-----GTNKWIGNIEEEFLARMKPGDIF 551 Query: 589 TLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL------ 642 TLG ++ + V A S +P W E ELG IG F + Sbjct: 552 TLGGRLYKFSHAKGTKCYVEEAKSASPTIPPWFSEQLPLSYELGIAIGKFRKEMSGMIRE 611 Query: 643 --------------------ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGS 682 + + ++N + I EQ G+VP + Sbjct: 612 EIDRRHKKGALSGSGMLRKGSIPKRIDSYLSKLPIDKNAKSAIYAYFAEQELFCGLVPNN 671 Query: 683 RHLVLERCRDEIGD-WRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVAR 741 +++E D + D ++ HS +GRRV++ + A A + + D S++ +D+G V Sbjct: 672 ELILVEYTSDNLKDSSYLVFHSLFGRRVNDALSRAFAVKFGKMTDEDISIMVNDNGFVLF 731 Query: 742 IPDTDGKLPDAAIFLFEP---EKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHR 798 + LFE L ++++E + + L RFR AAR+ ++ G + Sbjct: 732 VDHAMSMSERKVKKLFEEVLSSDLSKLLKENIRKTELMKRRFRHVAARSFMILKNYKGWK 791 Query: 799 TPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISD 857 P+ +Q++ A LL A+ PDFP+I ET RE D+ D+ ++ RL G+I+ Sbjct: 792 QPIGRQQVNAQLLLNAAEEIDPDFPIIRETYREIFGDLMDINRANEVLSRLKDGKIKYQF 851 Query: 858 VTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 ++T +PSPFA S+L F + + ER+ + L +L+ + Sbjct: 852 ISTDSPSPFAHSMLT-----FGHADVVMMKERQQYLKYLHKMVLKKI 893 >UniRef50_Q57742 Uncharacterized ATP-dependent helicase MJ0294 n=6 Tax=Archaea RepID=HELX_METJA Length = 841 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 252/893 (28%), Positives = 426/893 (47%), Gaps = 80/893 (8%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 ++ ++WF R +K T Q ++ L+ +PTGSGKTL+AFL ++ L + Sbjct: 18 EILEKPVKEWFKRKYKTFTPPQRYAIKEIHEGKNVLICSPTGSGKTLSAFLAGINELIK- 76 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + E ILY+SP++AL D++RNL+ PLK I D + G +RV +RT Sbjct: 77 ---LSMENKLEDRIYILYVSPLRALNNDIERNLKEPLKEIYDVAKEIGIELDEIRVAVRT 133 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 DT + ++ ++ + PP ILITTPESL + L S + + L G++ VI+DE+HA+ +KRG Sbjct: 134 SDTTSSQKQRMLKKPPHILITTPESLAIALNSPKFSQLLSGIKYVIVDEIHALT-NKRGV 192 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIRIVV 250 HL+LSLERL+ + + RIGLSAT+ ++VA FL G+ R +V+ + +I+++ Sbjct: 193 HLSLSLERLNRI--ANFIRIGLSATIHPLTEVAKFLVGNGRDCYIVDVSYKKEIEIKVIS 250 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV +D I + + + H++T++FTN+R E++ Sbjct: 251 PV--------------DDFIYTPSEEISKRLYNLLKKLIEEHKTTLIFTNTRSATERVAF 296 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L +L + +HH S+S+E R E+ Sbjct: 297 YLKQLGVEK--------------------------------VETHHSSLSREHRLEVEEK 324 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK GE+R ++++SLELG+D+G++DLVI + +P SV+ LQRIGR+GH++ SKG+ P Sbjct: 325 LKKGEIRVCISSTSLELGVDIGSIDLVILLGSPKSVSRALQRIGRSGHRLHEKSKGIIIP 384 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 R DLV++ V+ G+++ + P N LDVLAQ V A VDE Y+ +++A Sbjct: 385 FDRDDLVENVVLAYDAKIGKIDRIHIPKNCLDVLAQHLVGMALEKVWDVDEAYNLIKKAY 444 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA-QLLAVTSGGTI 549 P+KDL ++ F L+ L+G K+ + R + + + + GTI Sbjct: 445 PYKDLSKKDFLDVLNYLAGGIEE---KNVYAKIWL--KDNKFGKRGKSVRAIYYMNVGTI 499 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD V+ A + VGE++EE + DI LG +++ +++ V Sbjct: 500 PDETAVDVI-------ADGKYVGEVEEEFAEKLMKGDIFVLGGKTYKYLGGRGNKIRVKE 552 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLI 669 +P W E +L I F + + + +E T I+ + Sbjct: 553 VFDEKPTIPAWFSEQLPLAYDLALDIEKFRKEVLS-SDIEEIREKYDIDEKTAKAIKNYM 611 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 +EQ IVP +++E DE I H GRR +E A A A I + + Sbjct: 612 DEQNKFA-IVPDDEKVLIENF-DEEKRRYYIFHFVAGRRANEALARAFANYISKIKKCNV 669 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 + +D G +P LF + +++ V+E++ S + RFR A R + Sbjct: 670 RISVNDYGFALILPKNRKIKRADITELFNLD-VVKNVKESIERSEILKRRFRHVATRGFM 728 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + R + + +Q+ A LL+ + + P+ ETLRE L+D D+ ++ Sbjct: 729 ILRRYMNRKISVDRQQFNAEMLLKYCKEV-NHPLYRETLREILEDSLDIDNALDYFEKIK 787 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLR 902 +I + +PSPFA +L+ ++ ++ D ++ + L +++ Sbjct: 788 RRKI--YYLELPSPSPFAFNLVVSASSDVIFMED-----KKKMIAELHKKVME 833 >UniRef50_C5U8C6 DEAD/H associated domain protein n=1 Tax=Methanocaldococcus infernus ME RepID=C5U8C6_9EURY Length = 837 Score = 786 bits (2031), Expect = 0.0, Method: Composition-based stats. Identities = 261/907 (28%), Positives = 429/907 (47%), Gaps = 79/907 (8%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 + + ++ R WF +K T Q ++ L+ +PTGSGKTL+AF Sbjct: 7 EREYSDEEIYEILEEPVRVWFKSKYKSFTPPQRYAIKEIHEKKNVLICSPTGSGKTLSAF 66 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L ++ L + + E I+YISP++AL D++RNL+ PLK I + + G Sbjct: 67 LAGINELIK----LSMEKKLEDKVYIIYISPLRALNNDIERNLKEPLKEICETAKNLGIE 122 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 +RV +RT DT + ++ K+ + PP ILITTPESL + L S + + L+ V+ VI+DE+ Sbjct: 123 LDEIRVAVRTSDTTSHQKQKMLKKPPHILITTPESLAISLNSPKFSQLLKDVKYVIVDEI 182 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPA 240 HA+ +KRG HL+LSLERL+ + ++ RIGLSAT+ ++A FL G R +V+ Sbjct: 183 HALT-NKRGVHLSLSLERLNRI--SNFVRIGLSATISPLEEIAKFLVGVGRDCYIVDVSY 239 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 + +I+++ PV +D I + + + + H++ ++FTN Sbjct: 240 RKEIEIKVLSPV--------------DDFIYTPTEEITKKLYSLLKKLIEEHKTVLIFTN 285 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +RG AE++ L +L +HH S+S Sbjct: 286 TRGAAERVAFHLKQLGIK--------------------------------GVGTHHSSLS 313 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV 420 +E R E+ LK GEL+ V ++SLELGID+G++DLVI + +P SVA LQRIGR+GH++ Sbjct: 314 REVRLEVEEKLKRGELKVVCTSTSLELGIDIGSIDLVILLGSPKSVARALQRIGRSGHRL 373 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVD 480 SKG+ R DL+++ V+ G+++ + P N LDVL+Q V A VD Sbjct: 374 HEKSKGIIIAFDRDDLIENTVLAYDARTGKIDKVKIPRNCLDVLSQHIVGMALEKVWNVD 433 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 E Y+ V+RA P+KDL + F L LSG K+ ++ E + A++ Sbjct: 434 EAYNLVKRAYPYKDLSKEDFLDVLKYLSGSIEE---RRVYSKIWFDGE--KFGKKGRARV 488 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 + + GTIPD V ++ VGE++EE + DI LG +++ Sbjct: 489 IYFMNVGTIPDETAVEVY-------ENNKLVGEVEEEFAEKLMKGDIFVLGGKTYKFLGG 541 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEEN 660 +++ V +P W E +L + F A I + +E Sbjct: 542 RGNRIRVREVYNEKPTIPAWFSEQLPLAYDLALDVERFRGE-AKNISIDELIEKYEIDEK 600 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 I+G IEEQ IVP +++E +E I H GRR +E A A A Sbjct: 601 AGKAIKGYIEEQDRYA-IVPTEEEMLIESFEEEK-RRYYIFHFVAGRRANEAIARAFANY 658 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + + A+ ++ +D + + + LF + LL ++E++ S + RF Sbjct: 659 VSKVKRANVRIMVNDYSFALVLSKSRRLSKELLGQLFNID-LLSNLKESIERSEIIKRRF 717 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 R A R L+ R + + +Q+ A LLE + + P+ ET+RE L+D D+ Sbjct: 718 RHVATRGFLILRRYLNKKISVERQQFNAEALLEYCKKV-NHPLYRETIREILEDYLDIEN 776 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 ++ +I ++PSPFA +L+ ++ ++ D +R +L L ++ Sbjct: 777 ALNYYEKVKERKI--IYKKLSSPSPFAFNLVVMASSDVIFMED-----KRKMILELHKKV 829 Query: 901 LRNLLGQ 907 L + G+ Sbjct: 830 LEAIKGK 836 >UniRef50_O27830 Uncharacterized ATP-dependent helicase MTH_1802 n=24 Tax=Archaea RepID=HELX_METTH Length = 862 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 280/900 (31%), Positives = 432/900 (48%), Gaps = 74/900 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P +WF R F T Q R + LV +PTGSGKTL AFL + L R Sbjct: 18 LHPWVSEWFRRTFDDFTEAQRYAIMDIHRGRNVLVSSPTGSGKTLTAFLSIISELTRLAD 77 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + +YISP+KAL D++RNL+ PL I D G ++ +R +RTGD Sbjct: 78 D----GELEDSVYCIYISPLKALDNDIERNLEEPLSAIRDIAAGEG-RDLEIRKAVRTGD 132 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 T + ERS++ + PP ILITTPE+L ++L + RE L V VI+DE+H++A +KRG HL Sbjct: 133 TTSYERSRMLKKPPHILITTPETLSILLVAPKFREKLSTVRYVIVDEIHSLADNKRGVHL 192 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRI 248 +LSLERL L+ RIGLSATV VA FL G +R +V+ ++ I + Sbjct: 193 SLSLERLQHLVG-DFTRIGLSATVHPLERVARFLVGYSYGSERECLIVDVSYLKELDIDL 251 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + PV +D A I + + D + HR+T++FTN+R E + Sbjct: 252 ICPV--------------DDIVAADPEEIGNALYDILHDLIEDHRTTLIFTNTRSGTESV 297 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L + S +HH S+S+E R TE Sbjct: 298 VYNLKSRFPESYSDSN---------------------------IMAHHSSLSREIRLETE 330 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + LK GEL+ VV+++SLELGID+G +DLV+ +++P SV+ LQRIGR+GHQ+ SKG Sbjct: 331 EKLKRGELKAVVSSTSLELGIDIGYIDLVVLLSSPKSVSRALQRIGRSGHQLHQRSKGRI 390 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 R DLV+ ++I++ G+++++ P N LDVLAQ A + +D + +R Sbjct: 391 VVVDRDDLVECSLILKNALEGKIDSIKVPENCLDVLAQHIYGMAIENPWDIDHALAVIRN 450 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGG 547 + +++L R + + L L+G Y + K+ + + R A++L T+ G Sbjct: 451 SYCYRNLSREDYLSVLSYLAGEYVELEERYVYAKIWVDYDKNQFGKRGKLARMLYSTNIG 510 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPDR V K G + VG ++E+ + + R D LG +R V V Sbjct: 511 TIPDRSAAVV-------KCGGKVVGRIEEDFMEKLRKGDTFVLGGRIYRFNYARGMTVNV 563 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---DGAFFSGTIPPWLA-----EE 659 TPA G +P W E +L I F ++ I ++ +E Sbjct: 564 TPASG-PPTIPSWFSEQLPLSFDLALDIQRFRDIMDGKFQYGRSRDEIMEFIMSYLHVDE 622 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 ++I EQ G +P R +++E G I+ HS +GRRV++ + A+A Sbjct: 623 RAASSIYEYFREQYLYAG-IPSIRRMLVEYYTGFGGRKFIVFHSLFGRRVNDAISRAVAY 681 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 I + D + SD+G G L A EPE L ++++A+ + A+R Sbjct: 682 VIARRYRRDVMISVSDNGFYLSSEGKMGGL--EAFRELEPENLRNVLKKALDRTETLASR 739 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPD-FPVILETLRECLQDVYDL 838 FR CA RAL++ R G + +Q++R LL+ D FP++ E RE ++D D+ Sbjct: 740 FRHCAGRALMILRRYRGEEKSVGRQQVRGKILLKFVSELDDKFPILEEARREVMEDYMDI 799 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 R++ + G+++I + T PSPFA +L+ + + D RR +D Sbjct: 800 ENAIRVLEWIRDGDMEIKQINTRIPSPFAFNLVAQGYLDVLKYEDRIEFIRRMHQAIIDE 859 >UniRef50_A5UKH9 ATP-dependent helicase, Lhr-like protein n=5 Tax=Methanobacteriaceae RepID=A5UKH9_METS3 Length = 866 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 256/915 (27%), Positives = 435/915 (47%), Gaps = 82/915 (8%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P R WF F+ T Q ++ + + LV +PTGSGKTL AFL L L Sbjct: 18 LHPWVRQWFDETFEDFTPAQKKSIVDIHKGNNILVSSPTGSGKTLTAFLSILSEL----T 73 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 +++ +YISP+KAL D+++NL+ PLKGI + ++ +R +RTGD Sbjct: 74 TLSQKGELEDKVYCIYISPLKALDNDIEKNLEEPLKGI----EKIAGKDLGIRKAVRTGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 T +R K+ + PP ILITTPE+L ++L + RE L V+ VIIDE+H++A +KRG HL Sbjct: 130 TTQYQRQKMLKKPPHILITTPETLSILLVAPKFREKLSNVKYVIIDEIHSLAENKRGVHL 189 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVVNPPAMRHPQIRI 248 +LSLERL L+ + IGLSATV +VA FL G +R ++N ++ I++ Sbjct: 190 SLSLERLQHLIGQYTR-IGLSATVSPLEEVAKFLVGYEYGVERDCKIININYLKDLDIKV 248 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + PV+++ S + G + D + +++T+VFTN+R E+ Sbjct: 249 LCPVSDIMLADSEDTRLG--------------TYNLLDDLIQENKTTLVFTNTRSGTERF 294 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 L +++ +HH S+SKE R TE Sbjct: 295 VYNLKKMFPKNYNDEN---------------------------IMAHHSSLSKEVRLATE 327 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 LK G+L+ VV+++SLELGID+G +DLV+ + +P SV+ LQRIGR+GH++ S G Sbjct: 328 NKLKEGKLKVVVSSTSLELGIDIGYIDLVVLINSPKSVSRALQRIGRSGHKLNEKSTGRI 387 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 R DLV+ +V+++ G+++ + P N LDVLAQ + + +D Y +R+ Sbjct: 388 IVTNRDDLVECSVLLKDAKEGKIDKINIPQNCLDVLAQHIYGMSIENPWDIDYAYDVIRK 447 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGG 547 + +K+L R ++ L ++G Y + K+ + + R A++L T+ G Sbjct: 448 SYCYKNLTRDDYEDVLSYMAGEYEELEERYVYAKIWIDYKENTFGKRGKLARMLYSTNIG 507 Query: 548 TIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIV 607 TIPD V K VG+++E+ + + D LG ++R + V Sbjct: 508 TIPDSSGVLV-------KCDGETVGKIEEDFMERLKKGDTFVLGGQTYRFNYGKGMTINV 560 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPP--------WLAEE 659 +PA G +P W + +L I F + + + ++ Sbjct: 561 SPANG-PPTIPSWFSQQLPLSFDLAMDIQRFRAHMDAKFRYGKSKQEIMEFIYDYLYVDD 619 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 +I EQ +P ++ L++E + +I HS +GR+V++ + A+A Sbjct: 620 FAANSIYEYFVEQYTYA-KIPSNQRLLIEYYKGFGDRRFVIFHSLFGRKVNDALSRAVAY 678 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + + + ++ SD+G T G L A PE I+ +++ + A+R Sbjct: 679 IVARQYNTNVTISISDNGFYLSAEGTLGGL--EAFKQLTPENFKNILTQSLNKTETLASR 736 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-DFPVILETLRECLQDVYDL 838 FR CA R+L+ G + +Q++R LL+ Q DF ++ E RE L+D D+ Sbjct: 737 FRHCAGRSLMTLRHYKGEAKSVGRQQVRGKILLKFVQEMDNDFSILKEARREALEDYMDV 796 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDS 898 +++ + G+++I + T P+PFA +L+ + + Q+D +R + Sbjct: 797 NNALKVIELIANGQMEIKTINTIIPTPFAFNLVSQGYLDVLNQNDKAEFTKR-----MHK 851 Query: 899 ELLRNLLGQVDPGEL 913 +L + ++ +L Sbjct: 852 AVLEQIKEKLKESDL 866 >UniRef50_Q6L0N7 ATP-dependent helicase n=1 Tax=Picrophilus torridus RepID=Q6L0N7_PICTO Length = 1667 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 276/919 (30%), Positives = 444/919 (48%), Gaps = 84/919 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P +WF + + Q + + LV +PTG+GKTL FL ++ LF Sbjct: 14 LDPVVAEWFNSKYDSLSEPQRYGIPLIHNKNNVLVSSPTGTGKTLTGFLSIINELF---- 69 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R +YISP+KAL DV +NL+ PL I + R G ++R+ +R+GD Sbjct: 70 IKARSGSLEDKIYCVYISPLKALANDVNKNLKTPLNEIYEIARSHGIDLPDIRIAVRSGD 129 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHL 193 T A+ER+++ PP ILITTPESL L+LT ++ RE GVE VI+DE+H ++ +KRG+ L Sbjct: 130 TDARERARMLSKPPHILITTPESLSLVLTANKFREKFFGVEYVIVDEIHEISSTKRGSLL 189 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRI 248 +L+LERL + + RIGLSAT +AA+L G R ++ ++ +R+ Sbjct: 190 SLNLERLAYIAG-NFVRIGLSATQAPLDLIAAYLCGYDGEKRRECRIIEVNTNKYLDLRV 248 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + P ++ VS + + I+D V H++T++FTN+RG E + Sbjct: 249 ITPSKDLTKVSYEIAT--------------EKMYDIIVDLVNSHKTTLIFTNTRGSTEHV 294 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 RL +HH S+ KE R E Sbjct: 295 AMRLKARGIEN--------------------------------IEAHHSSLGKETRVDVE 322 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 LK GEL+CV+ ++SLELGID+G +DLVIQ+ +P SV+ LQRIGR+GH V SKG Sbjct: 323 NKLKRGELKCVITSTSLELGIDIGYIDLVIQIGSPKSVSRALQRIGRSGHGVRDFSKGRL 382 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 DL++ V+ + ++ + P NPLDVL+Q V A VDE Y ++ Sbjct: 383 VVFDIDDLMECTVLTRAAYDHNIDKVQVPLNPLDVLSQALVGMALEKTWNVDEAYKIIKN 442 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + + L R F TL LSG+ K+ ++ ET + +L+ + GT Sbjct: 443 SFSFHTLDYRDFIYTLKYLSGKIEGNTI---YSKIWYDEETSTFGKKRSTRLIYFMNVGT 499 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IPD Y+V R +G+L ++ V + R DI LGA +++ + R++V+V+ Sbjct: 500 IPDEANYNVFNDH------GRMIGQLSDKFVEKLRQGDIFVLGARTYKFIKTVRNRVMVS 553 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA---DGAFFSGTIPPWLAEENTIANI 665 A G + +P W GE R +LG +IG F LA D + + + +E ++ Sbjct: 554 DATGMTPTVPSWTGELLPRSYDLGVLIGRFRKELASMDDNSAKEWLMKNYYIDEFGAMSL 613 Query: 666 QGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 I+ Q+ +P L++E D+ ++ II H P GRRV++ + A A I + Sbjct: 614 VSYIKAQK--PYGIPSEDFLLIEGYMDK--NYNIIFHIPLGRRVNDALSRAYAYIISNNY 669 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 +A + +D+G + I + I++ ++ ++ +F RFR CA Sbjct: 670 DVNARISVNDNGFMISFDK--RIEIKDVIRMLTSRNFDDILKRSIENTEMFKQRFRYCAT 727 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 RAL++ + P+ +Q+LR+ +LL + + +FPVI ET E L DV D+ + Sbjct: 728 RALMVLRKYKSADVPVTRQQLRSDKLLRVLENMDNFPVIKETYNEILNDVMDMEHALLYI 787 Query: 846 RR-LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL-SLDSELLRN 903 + + G +I+D + T SPF+ +L+ SD L E ++ +L ++LL Sbjct: 788 KNVIEKGRFKINDYSRET-SPFSYNLIISG------ASDVVLMEDKSKLLREFQNKLLDK 840 Query: 904 LLGQVDPGELLDPQVIRQV 922 + G + D +++ Sbjct: 841 IYGSSINFLVNDARLVENY 859 >UniRef50_B3T6F6 Putative DEAD/DEAH box helicase n=1 Tax=uncultured marine microorganism HF4000_APKG2H5 RepID=B3T6F6_9ZZZZ Length = 1763 Score = 753 bits (1944), Expect = 0.0, Method: Composition-based stats. Identities = 301/1148 (26%), Positives = 480/1148 (41%), Gaps = 119/1148 (10%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 + L D+ SP R+WF+ F T Q EH L+ +PTGSGKTL AFL + Sbjct: 12 ETQELLDILSPPVRNWFVDTFPDFTEPQKIAIPRILNGEHLLLCSPTGSGKTLTAFLTII 71 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 D L R + T T + +YISPIKAL D+Q+NL PL I + ++ Sbjct: 72 DDLVRRSLDGT----LPDTVQCVYISPIKALANDIQKNLIGPLSEIKERFLPSRAK--DI 125 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVA 185 ++ +RTGDTP ER K+ R PP ILITTPESL L+L S R R L+ ++ +IIDE+H++ Sbjct: 126 KIALRTGDTPQNEREKMLRRPPHILITTPESLGLILASKRWRPNLKDLKWMIIDEMHSLV 185 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 +KRG HL+LSL +D ++ + QRIG+SAT+ DVA FL P + PQ Sbjct: 186 SNKRGTHLSLSLALMDTVVSSEVQRIGISATMEPLDDVAEFLVASDPRE-----SDMEPQ 240 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + V+ ++ + I + I + V H +T+VF N+R + Sbjct: 241 RVSIANVSGSREIDLDIILPTARFSSIPIKEILDHNIDRIKELVEAHTTTLVFVNTRNMT 300 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E + RL + + + HHGS+ K R Sbjct: 301 ETVVQRL--------------------------------KIAGLEGVEGHHGSMDKTIRL 328 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E+ LK+G LR VV+++SLELGID+G+VDLVIQV +P S+++ LQR+GRA HQVGG+ + Sbjct: 329 DVERRLKNGLLRAVVSSTSLELGIDIGSVDLVIQVGSPGSISTALQRLGRASHQVGGIPR 388 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 F P + DL++ + + G ++ L P N LDVLAQ + + + +DE Y Sbjct: 389 ARFLPTSPHDLLELVAVQTGILRGSMDLLKFPKNCLDVLAQFMIGLSIIREWDIDEGYEL 448 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTS 545 V + P++ LP + LD+L ++ + E R AQ++ T+ Sbjct: 449 VTSSWPYRSLPYEDYIEVLDLLEEER----------RIWVDWEDNRFGKRGFAQMIYYTN 498 Query: 546 GGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQV 605 GTI Y V +G VG+L V R D+ LG +++R+ + +V Sbjct: 499 IGTIAPDNNYLVFTSDGT------LVGQLSSSFVQSLRNGDVFLLGGSTYRVSSVRGTRV 552 Query: 606 IVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT---- 661 VT A G +P W GE R EL + I L +A + P L + Sbjct: 553 NVTSATGYRPTIPSWTGEAMSRTHELSQEILQLLGHVALRLRLGDDVKPLLTDVLGLSRP 612 Query: 662 -IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + + EE T VP +++E+ + I+ + GR + AG Sbjct: 613 VASALSEFFEEHCATTFQVPSRDRILVEQVEAPLP--TYIVTTCRGRAFNMALGYLFAGI 670 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 A + ++G + ++ + +F + ++ + S LF RF Sbjct: 671 ASADDVIVHELSFDENGFMVKL--SHEVEVSRIPEIFRNGRSGDTLQRFLMDSQLFTKRF 728 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 RE ++R++L P R G Q + +A Q+++ + D ++ E + E L D+ Sbjct: 729 REVSSRSMLNPRRIGGDEVSPKQFQQKAEQIMQKHRKMDDSIIVREVMNEILHTDLDMEQ 788 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 L+ + R++ +++I PSP +L + + L R + +D E+ Sbjct: 789 LDDFISRMDSEDVRIVHRKVKMPSPLGMTLFMSSFEDLLS-----LRTRAFLIKDVDPEI 843 Query: 901 LRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRH 960 LR LLG LD + + + L L+ G + + Sbjct: 844 LRRLLGARSLATDLDEGKLDDYYQSKVSV-----PLNANALLKLMDMGGGLEPTLTNPLY 898 Query: 961 TG-----SSEEVASYLENLLAVKRIFPAMISG----QERLA--------------CMDDA 997 + + + ++ L + +G E+ + A Sbjct: 899 SDKLRNIDFDVMQGWVHELAERGLVTKIRNTGHKQIDEKWFSMRMAGVHGTLGCLAVAGA 958 Query: 998 ARLRD-----------ALGVRLPESLPEIYLHR-VSYPLRDL---FLRYLRAHALVTAEQ 1042 A + D +G+ P + +S PL L L L + T+ Sbjct: 959 AEMDDLRELYTGGLTFEMGMDFKGGTPGRWKKTGLSDPLDCLRLKLLDMLGSEGPQTSVA 1018 Query: 1043 LAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAAT 1102 L A V+ LQ+L + LV E R+ + V Sbjct: 1019 LCERLPFPPAQVDSVLQELEMRNLVSIGFFKQTDDGEYILRMDEYRITG--GEVDVVDYR 1076 Query: 1103 TYARLLLE 1110 T LLL+ Sbjct: 1077 TLQSLLLQ 1084 >UniRef50_UPI0000F5176A ATP-dependent helicase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI0000F5176A Length = 1698 Score = 750 bits (1936), Expect = 0.0, Method: Composition-based stats. Identities = 269/990 (27%), Positives = 456/990 (46%), Gaps = 97/990 (9%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 WF + + + Q + + + ++ LV +PTG+GKTL FL ++ LF++ Sbjct: 16 LDDIVAQWFNTKYSELSEPQKKAIPLIHQKKNVLVSSPTGTGKTLTGFLSIINELFKKAR 75 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + +YISP+KAL D+ +NL PL I + +G ++V +R+GD Sbjct: 76 NN----ELEDKIYCVYISPLKALANDINKNLNEPLSEIYALAKEKGLDIPEIKVAVRSGD 131 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHL 193 T ER+K+ R PP I+ITTPES L +T+ + +E VE VI+DE+H V+ +KRG+ L Sbjct: 132 TAQSERNKMLRKPPHIIITTPESFSLAITATKFKEKFSSVEYVILDEIHEVSSTKRGSLL 191 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVTVVNPPAMRHPQIRI 248 + +LERL+ L RIGLSAT + ++L G R ++ ++ + I Sbjct: 192 SFNLERLENL-SPGFVRIGLSATQAPLDLIGSYLCGYNGEHKRDFEIIEVNTNKYLDLSI 250 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + PV ++ VS + ++D V H++T++FTN+R E + Sbjct: 251 ITPVKDLTMVS--------------YEVANEKMYDILVDLVNSHKTTLIFTNTRSSTEHV 296 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 RL +HH S+ K+ R E Sbjct: 297 AMRLKARGIEN--------------------------------IEAHHSSLGKQTRIEVE 324 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 LK+GEL+CV+ ++SLELGID+G +D+VIQ+ +P SV+ LQRIGR+GH V +S G F Sbjct: 325 NRLKNGELKCVITSTSLELGIDIGYIDMVIQIGSPKSVSRALQRIGRSGHGVKDLSLGRF 384 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 DL++ AV+ + + ++ +T P NPLDVL+Q ++ + VD Y+ +R Sbjct: 385 IVFDLDDLMECAVMTKAAYDHEIDKVTVPENPLDVLSQGIISMSLEKNWDVDVAYNVIRN 444 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + + L + +TL LSG+ K+ ++ + + + +++ + GT Sbjct: 445 SFSFHTLEYGDYISTLQYLSGKIEGNT---LFSKIWYDEDEKVFGKKASTRMIYFMNVGT 501 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 IP+ Y+V+ + R +G+L ++ V + DI LGA ++ + T++ + V Sbjct: 502 IPEEANYNVVNEK------GRMIGQLSDKFVERLKNGDIFVLGAKTYMFLKATKNNITVK 555 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA-----EENTIA 663 A G +P W GE R +LG +IG+F L + WL + Sbjct: 556 VATGMKPTVPSWTGELLPRSYDLGILIGEFRKTLYERIKNGEETEKWLMENYRVDSFGAR 615 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 ++ ++ Q N T +P L +E D + II H P GRRV++ + A + Sbjct: 616 SLISYVKTQGNFT--IPTEDLLYIEGYIDND-LYSIIFHIPLGRRVNDALSRAYGLAVSN 672 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 +GA+ + +D+G + + L P +V ++ ++ LF RFR C Sbjct: 673 KYGANTRISVNDNGFTLTL--NRKVPIKDVVGLLTPSNFRDLVDRSIINTELFKQRFRYC 730 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALER 843 A R+L++ + + +Q+LR+ +LL I + +FPVI E E DV D+ Sbjct: 731 ATRSLMVLRKYKQTDISVARQQLRSDRLLRILESMDNFPVIKEAFNEVKYDVMDVERAAW 790 Query: 844 LMRR-LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVL-SLDSELL 901 + ++ +I D +T T SPF+ +L+ V SD L E R+ +L L S+LL Sbjct: 791 FVNDVISKKHYKIKDYSTET-SPFSYNLILSGV------SDIVLMEDRSKLLKELRSKLL 843 Query: 902 RNLLGQVDPGELLDPQ------------VIRQVEEELQRLAPGRRAKGEEGLFDLLRELG 949 + G L+ I+ +E + L FD E Sbjct: 844 DKIYGTEGIEFLIKDSKLVENYFKNKIPAIQDIESYREFLEHFLYVDPFRKKFDSPLEYA 903 Query: 950 PMTVEDLAQRHTGSSEEVASYLENLLAVKR 979 + ++++ ++ S E V ++ + V R Sbjct: 904 TIDLDEMTEQLINSGELVYCFIRSDQWVSR 933 >UniRef50_Q0W5W5 Lhr-like RNA helicase n=12 Tax=Euryarchaeota RepID=Q0W5W5_UNCMA Length = 885 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 256/919 (27%), Positives = 431/919 (46%), Gaps = 84/919 (9%) Query: 9 SLLPDVFSPATRDWFLRAFK--------QPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + +F P+ R W+ F T Q + + ++ L+ +PTGSGKTL+ Sbjct: 26 EEILSLFEPSVRQWWTETFGPKKQVNNGYFTPPQRLAIPLIHQGKNVLICSPTGSGKTLS 85 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 +F ++ LF + E + +YISP+K+L D+ +NL+ PL I+ Sbjct: 86 SFTAIINELFLLASSEGLEN----SVYCIYISPLKSLANDIHKNLEQPLDQISKLYGDEK 141 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 +R IR GDT + ERS + R P IL TTPE+L ++L S R E L V VIID Sbjct: 142 L----IRAAIRHGDTASDERSSMLRKTPHILNTTPETLAILLNSPRFVEKLATVRWVIID 197 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-----DRPVT 234 E+H++A +KRG L+L+LERL+ ++ RIG SATV + FL G R VT Sbjct: 198 EIHSMADTKRGVFLSLALERLEEVVRKPFVRIGCSATVEPLDKIGEFLAGCENGIPRDVT 257 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 VV+ +R ++++ PV N+ + S+ + + I + + + Sbjct: 258 VVDTRFVREFDLKLLCPVPNLIEASA--------------QEVNHALYEMIHGMIQENTN 303 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 T+VFTN+R AE++ L + Y S Sbjct: 304 TLVFTNTRSGAERILYHLRKEYPDYYNEENS---------------------------GC 336 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGS+SK R E LK+G L+ +++SLELGIDM +DLVIQV +P SV++ LQR+G Sbjct: 337 HHGSLSKGGRLDIEDKLKAGTLKVATSSTSLELGIDMPYLDLVIQVGSPKSVSALLQRVG 396 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 RAGH +G V KG R +L++ AV+++ G ++ + P N LDVL Q A Sbjct: 397 RAGHSLGQVVKGRVIALDRDELIECAVMLKKAQDGFIDGVNIPENCLDVLIQHVFGMAIN 456 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 + ++++ VRR+ +++L FD + L+G P + + K+ + ETG + Sbjct: 457 EPMELERVKKIVRRSYCYRNLSDEDFDEVIKYLAGSLPGMEDRSIYGKIWHDPETGKIGR 516 Query: 535 RPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGAT 593 R A+++ T+ GTIPD V+ ++ + VG+LDE+ + + + D+ LG Sbjct: 517 RGKLARMIYYTNIGTIPDEFSCDVIT-----RSDQKWVGKLDEQYLEKLQKGDVFVLGGK 571 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFL----HLLADGAFFS 649 + Q +V V P+ R +P W E +L I DF + D + Sbjct: 572 FFEFQYRRGSKVYVDPSHSR-PTVPSWFSERLPLSFDLALHILDFRDMMARRVGDRSTRK 630 Query: 650 GTIPPWLAEENTIANIQGLIEEQRNATG--IVPGSRHLVLERCRDEIG-DWRIILHSPYG 706 + + +EN+ +I + +EQ G + + V+E D+ S YG Sbjct: 631 WLLNTYPLDENSAESIYQIFDEQIRYKGENSISTRKKFVIEEHLDKPHFRRYYYFQSNYG 690 Query: 707 RRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIV 766 R ++ + +A + ++ ++ SD G +P + I + K+ ++ Sbjct: 691 RPFNDGLSRVLAYIVSRQRTSNVTLSVSDSGFFISVPLSKKLDLLDYIESLDETKVKDLL 750 Query: 767 REAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILE 826 R ++ S L FR A R+L++ GH+ +Q++ A +L A +F V+ E Sbjct: 751 RLSLEESQLLKRMFRINATRSLMILRNYKGHQKSAKRQQVSADMMLSYAHKLDNFAVLEE 810 Query: 827 TLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPL 886 RE ++D ++ +++++R + GEI++ + TPSP + + + SD L Sbjct: 811 AYREIIEDKLEIAHIQQIIRGIKDGEIEVELIPVETPSPLSFGI------ASLSASDVVL 864 Query: 887 AERRASVL-SLDSELLRNL 904 AE + S+L ++ + Sbjct: 865 AEDKNSLLKEFHQRVMEKI 883 >UniRef50_D2EED6 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EED6_9EURY Length = 878 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 256/920 (27%), Positives = 442/920 (48%), Gaps = 83/920 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P + WF+ FK T Q ++ + ++ L+ APTGSGKTL+AF+ +++L Sbjct: 16 ETLGPIVKKWFISKFKGLTPPQKFSFKLIHDHKNVLITAPTGSGKTLSAFIPIINKLVEL 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 D + + LYISP++AL D+ +NL +P++ + + + +G+RT Sbjct: 76 SVND----QLKDEIKCLYISPLRALNNDIYKNLILPIEDLYKTPE--LIEKRKITIGVRT 129 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDTP ER K +PP+I +TTPESL +ML S + + ++ VIIDE+H +A SKRG+ Sbjct: 130 GDTPQNERRKQFVHPPNIFVTTPESLAIMLNSPKFIQKFVNLDYVIIDELHELANSKRGS 189 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVV 250 HLA+SLERL L++ RIGLSAT+ A+FL G R VV+ + +++ Sbjct: 190 HLAISLERLTNLINHDFVRIGLSATIYPLEKAASFLVGTKRSCVVVDASWSKKINAKVIS 249 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV ++ +E I + I V +R+T++FTN+R E+L Sbjct: 250 PVKDLI--------------YTKESEIDDSMYNIINKIVKMNRTTLIFTNTRSGTERLVF 295 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L + + + + +HHGS+S+E+R E+ Sbjct: 296 NLKKRFGYKDEE-----------------------------VSAHHGSLSREERFSVEEN 326 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK+G L+CVV+++SLELGID+G +D VIQ+ +P S+ LQRIGR+GH + G Sbjct: 327 LKNGRLKCVVSSTSLELGIDIGNIDNVIQINSPKSITRALQRIGRSGHGFKDTANGDLII 386 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 R DL++ V++ +L+ T P NPLDVLAQ V +D+ Y+ +++A Sbjct: 387 NNRDDLIECTVMLYDGLKRKLDAFTMPENPLDVLAQHIVGMGLNKIWNIDDAYNLIKKAY 446 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGGTI 549 +++L ++ F + L+G Y + K+ +++++ R +L+ T+ GTI Sbjct: 447 SFRNLEKKEFMDLIKYLAGEYVPLRERSVYGKIWFDKDSNKFGKRGRLTRLIYYTNIGTI 506 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD +V + +++G ++EE + + + D+ LG ++ Q+ + V P Sbjct: 507 PDEVAINVYIW-----GTKKKIGNIEEEFLEKLKKGDVFVLGGKVYKFQRSSAADCFVLP 561 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--------------DGAFFSGTIPPW 655 A G +P W E EL IG F + I + Sbjct: 562 AIGEKPNIPPWFSEQLPLSYELAIDIGKFRREFSSIITRLPKEKFIYKKQKELPEKIKKY 621 Query: 656 LA----EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 L ++N+I +I I EQ T +P + +++E+ R I HS +GRRV++ Sbjct: 622 LLSMPADKNSIISIYEYILEQVYFTDKIPSDKLILIEKTRYND-REYTIFHSLFGRRVND 680 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVA-RIPDTDGKLPDAAIFLFEPEKLLQIVREAV 770 + A + + +V +D+G D L + I + + +I++E + Sbjct: 681 ALSRVFAFILSDKLDEELELVINDNGFALISNEKIDDYLIKSVISVAYNSDIRKIIKENI 740 Query: 771 GSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-DFPVILETLR 829 + + RFR AAR L++ GHR + +Q++ A LL+I DFP++ E R Sbjct: 741 KRTEMLRRRFRHAAARGLMILKNYKGHRIRVERQQINAQALLKIISEMDEDFPILKEAYR 800 Query: 830 ECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAER 889 E +DV D+ +++ + +I+ S + T PSPF+ +L+ + + + + Sbjct: 801 EIEEDVMDILNASSILKSIKSKKIKYSIIETPVPSPFSHNLVTIGETDVIS-----IKNK 855 Query: 890 RASVLSLDSELLRNLLGQVD 909 + V L ++ + + + Sbjct: 856 KEYVRQLHRLVMEKIAEKQN 875 >UniRef50_D2RXL5 DEAD/H associated domain protein n=5 Tax=Halobacteriaceae RepID=D2RXL5_9EURY Length = 922 Score = 692 bits (1785), Expect = 0.0, Method: Composition-based stats. Identities = 268/944 (28%), Positives = 426/944 (45%), Gaps = 99/944 (10%) Query: 13 DVFSPATRDWFLRAFKQ--------PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 D+ PA ++W+L F + T Q + LV APTGSGKTL++F Sbjct: 32 DLLEPAVQEWWLEEFGEYVPENEGFFTPPQQGAIPKIHEGTNTLVCAPTGSGKTLSSFCA 91 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR--GET 122 +D L+R + + + LY+SP+K+L D+ RNL++PL+GI R G Sbjct: 92 IIDELYRRDRDA--DDGLENSVYCLYVSPLKSLANDIHRNLEVPLEGIESVVAERDDGAE 149 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 +R IR GDT + +R K+ P IL TTPE+L ++L S + RE LR VE VI+DE+ Sbjct: 150 MGEIRHAIRHGDTSSSDRQKMLEETPHILNTTPETLAILLNSPKFREKLRTVEYVIVDEI 209 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-------RPVT 234 H++A KRG HL++SLERL+A++ RIG SAT+ VA FL G RP Sbjct: 210 HSLAAGKRGTHLSVSLERLEAMVDHEITRIGCSATIEPLEGVAEFLVGRDEPGGDSRPYE 269 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 +V+ R I + P ++ + + + + H + Sbjct: 270 IVDARFAREFDIELECPTDDLIHTP--------------REVVQERFYRMLHEHIQEHTN 315 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 T+VFTN+R AE++ L E + A + + Sbjct: 316 TLVFTNTRSGAERVLHNLREEFDAYDEENS----------------------------GC 347 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIG 414 HHGS+SK+ R E LK G L V +++SLELGIDM VDLV+QV +P SVA+ LQR+G Sbjct: 348 HHGSLSKDVRHDIEARLKEGSLDVVTSSTSLELGIDMPHVDLVVQVGSPKSVAALLQRVG 407 Query: 415 RAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 RAGH+VG G R +L++ AV+++ G +++++ P N DV AQ A Sbjct: 408 RAGHRVGQTVTGRVIALDRDELLECAVMLKKADDGFVDSVSIPENAQDVAAQHIYGMAIA 467 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET----- 529 + E +RRA P+++ +++ L+ Y + K+ + Sbjct: 468 EIRPESEVVGILRRAYPYRNYSDVEWESLARYLTADYAGLEDKNVYAKIWRDENDPPSGE 527 Query: 530 ---------GILTARPG--AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM 578 L + G A+++ +T+ GTIPD V +AG VG+LDE Sbjct: 528 HHHEEYPVGQPLIGKRGRLARVIYMTNIGTIPDSFTCDVKT-----RAGDEWVGQLDENY 582 Query: 579 VYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDF 638 + D+ LG + + +V V R +P W E ++LG I F Sbjct: 583 LDTLEKGDVFVLGGDHFEYRYRRGSKVYVDRTSAR-PTVPSWYSERLPLSSDLGREILAF 641 Query: 639 LHLLAD------GAFFSGTIPPWLAEENTIANIQGLIEEQRNATG--IVPGSRHLVLERC 690 L + + + +++++ I L E Q G V + L +E Sbjct: 642 QGELLERYDAGGPPRVRAWLREFPLDDDSVRAIARLFEHQLRYAGSESVSTTDRLAIEVV 701 Query: 691 RDEIG-DWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL 749 RD + +HS YGR+V++ ++ +A R A+ V +D+G V +P Sbjct: 702 RDRDEYERHYYVHSAYGRKVNDGFSRLLAYRCAQEATANVRVAVADNGFVLSMPLNRKVD 761 Query: 750 PDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRAS 809 + + E + + + +R A+ + L FR A R+L++ R G+ +Q++ + Sbjct: 762 VEGILEDLEADDVREDLRSALSGTDLLQRYFRINATRSLMILKRYKGYEKSASEQQVSSE 821 Query: 810 QLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATS 869 LL A+ DF VI ET RE L+D ++ LE ++ + EI + +P+P A Sbjct: 822 MLLGFAEDLEDFAVIEETYREILEDKLNVAELEEIVGDIAACEIAVERTLLDSPTPRAFG 881 Query: 870 LLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGEL 913 L + SD LAE ++ L E + +G+ L Sbjct: 882 L------ATLSASDVVLAEDESAALQAFHEHVLEEIGEEALRGL 919 >UniRef50_Q0W7D8 ATP-dependent RNA helicase n=3 Tax=Euryarchaeota RepID=Q0W7D8_UNCMA Length = 937 Score = 681 bits (1757), Expect = 0.0, Method: Composition-based stats. Identities = 243/963 (25%), Positives = 405/963 (42%), Gaps = 121/963 (12%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 ++ P R+ +PT Q + H L+IAPTG+GKT +A L A D L R Sbjct: 6 ELLDPRIREALSELGMTEPTGTQQKAIPAILSGGHVLLIAPTGTGKTESALLPAFDLLMR 65 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 + +R+ ++LYI+P++AL D+ + ++ ++L + +R Sbjct: 66 ------MSSEEREGIKVLYITPLRALNRDMMKRMR------------WWAGRLDLNIDVR 107 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRG 190 GDT ER + PPDILITTPE++ ML SR RE L+ + VI+DEVH +A SKRG Sbjct: 108 HGDTTTHERRRQALKPPDILITTPETVQAMLMGSRMRENLKSLAMVIVDEVHELASSKRG 167 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIV 249 +A++LERL +RIGLSATV + +VA FL G R +V + + Sbjct: 168 TQMAIALERLGRYTE--FRRIGLSATVGTPGEVAKFLAGTGREAQIVEVKLAKSLDFHVT 225 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 P D + A + ++ +D + R+RST++F N+R AE + Sbjct: 226 YPETIDSDKPLSKKLLTDPDIAAQIRTM--------IDLIKRNRSTLMFVNTRQSAEAIG 277 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 AR +L A HHGS+SKE R E Sbjct: 278 ARFRKLDQA---------------------------------IAVHHGSLSKEARIEAED 304 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 + K G++ +V TSS+ELGID+G +D VIQ +P V+ LQR+GRAGH +G S G Sbjct: 305 SFKDGKVNALVCTSSMELGIDIGDIDHVIQYMSPREVSRLLQRVGRAGHSIGETSSGTII 364 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRR 488 D ++ I AG++EN+ D LA Q A A + Y V + Sbjct: 365 TINEDDSAEAWAICRRASAGQIENINLYKKSYDALANQICAMALEYGDISATYVYETVCK 424 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 A P+ L R+ FD L L +L++ G++ + + + Sbjct: 425 AYPYAQLSRKEFDRVLQQLVE-----------ERLIFLSPEGLIGRKAKTRTYMYENLSM 473 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIV 607 IPD + V + R +G LDE V + V I WRI ++T D+V V Sbjct: 474 IPDEKRFDVY-----DVITGRMIGTLDEAFVVNFADVGAIFITKGEMWRIVEVTEDRVRV 528 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSG------TIPPWLAEENT 661 P +P W GE P + +G +A+ A + +E T Sbjct: 529 EPIENPQGEVPSWTGEEIPVPFSVAMEVGAIRRTVAEMAGSPEADIVRYLTSAYPTDEAT 588 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 + +++Q VP + + +E + I++++ +G +V+E + + Sbjct: 589 ARSYVRYVKKQVAGNYPVPSDQLVTVEEE-----ERTIMINACFGHKVNETLGRVVTALL 643 Query: 722 HALWGADASVVASDDGIVARIPDT-DGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + +G ++ I +P I EP + I+ + + ++ L + Sbjct: 644 ASRFGGGVAMEIDPYRIKLELPKRIRAADVAKMIADLEPIFVEPIIEKTLKNTLLLKWKM 703 Query: 781 RECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPA 840 A + + +R+ +LL + + P+ E + E L D D+ Sbjct: 704 VHVARKFGALSRDVD-------YERISMEKLLNV---FEGTPMYEEAVNEILHDKLDIDN 753 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSEL 900 +++ ++ GEI++ T SP + F E M AP + R+ VL+L + Sbjct: 754 AIKVLEKIRSGEIKVL---TGRLSPIGDAG-FTGGRELM----APESADRSIVLALKERI 805 Query: 901 LRN--LLGQVDPGELLDPQVIRQVEEEL------QRLAPGRRAKGEEGLFDLLRELGPMT 952 + + +L ++ + + ++ VEE RL + +E DL+++ Sbjct: 806 MNDHVILFCLNCKQFSSKRKVKDVEERPVCPLCNSRLIAALKPWEKEE-ADLVKKAAKNK 864 Query: 953 VED 955 + + Sbjct: 865 LAE 867 >UniRef50_Q18G68 Lhr-like helicase n=2 Tax=Halobacteriaceae RepID=Q18G68_HALWD Length = 961 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 271/966 (28%), Positives = 428/966 (44%), Gaps = 124/966 (12%) Query: 14 VFSPATRDWFLRAFKQ--------PTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYA 65 PA ++W++ F + T Q + + E+ALV APTGSGKTLA+F Sbjct: 42 RLDPAVQEWWVSQFGRYVAENDGFFTPPQREAIPLVDNQENALVCAPTGSGKTLASFTAV 101 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER--------- 116 L+ LF+ R+ LYISP+K+L D+ RNL +PL GI + Sbjct: 102 LNDLFKRAR--KRDDGLENQVYCLYISPLKSLANDIHRNLDVPLSGIRERIIADAKSKSE 159 Query: 117 -------------------RRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPES 157 ++ +N+R IR GDT + ER ++ P IL TTPE+ Sbjct: 160 SEIKTQSANTAATDGSSGSEEDVDSSINVRHAIRHGDTDSAERQRMLEETPHILNTTPET 219 Query: 158 LYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSAT 216 L ++L + RE LRG+E VI+DE+H++A +KRG HL++SLERL+ L TS RIG SAT Sbjct: 220 LAILLNAPKFREKLRGIEYVIVDEIHSLAANKRGTHLSVSLERLEELTETSPTRIGCSAT 279 Query: 217 VRSASDVAAFLGG------DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSH 270 V S V FL G R +V+ +R + + P ++ Sbjct: 280 VEPLSTVGKFLVGYNNDGTPREYELVDTRFVREFDLSVECPTDDLIHTP----------- 328 Query: 271 AGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA 330 G + + + H++TIVFTN+R AE++ + L + + + Sbjct: 329 ---RGKVQARFYDRLEQLIDDHKNTIVFTNTRSGAERVLSTLRDRSDTFDESNS------ 379 Query: 331 AHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGID 390 HHGS+SK +R E LK+G L V ++SLELGID Sbjct: 380 ----------------------GCHHGSLSKTRRQEIESELKAGTLDVVTTSTSLELGID 417 Query: 391 MGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGR 450 M VDLV+QV +P SVA+ LQR+GRAGHQ+G +G R +LV+ AV+++ +G Sbjct: 418 MPHVDLVVQVGSPKSVAALLQRVGRAGHQLGETVEGRVIALDRDELVECAVMLQKAESGF 477 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR 510 ++ + P DV +QQ A + + + + RA P+++ ++ L L+ Sbjct: 478 VDRVFIPEGAHDVASQQIYGMAINEIRREATFRQILTRAYPYRNYGDDDWEELLRYLTAD 537 Query: 511 YPSGDFSAFRPKLVWN--------------RETGILTARPG--AQLLAVTSGGTIPDRGM 554 Y D PK+ + L + G A+++ +T+ GTIPD Sbjct: 538 YDGLDEKNVYPKIWRDTNDAPSGEHHYDEFPVGTPLIGKRGRLARVIYMTNIGTIPDSFS 597 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 +VL ++ ++VG LDE+ + D+ LG + + +V V Sbjct: 598 CTVLT-----RSEDKQVGTLDEDYLDTLETGDVFVLGGDRFEYRYRRGSKVYV-DRTSER 651 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT------IPPWLAEENTIANIQGL 668 +P W E +LG I F + + G + + + N+ I + Sbjct: 652 PTVPSWFSERLPLSYDLGREIASFQGEVINRLEADGATATRQWLDEFPIDTNSARAITRI 711 Query: 669 IEEQRNATGI--VPGSRHLVLERCRDEIG-DWRIILHSPYGRRVHEPWAVAIAGRIHALW 725 ++QR TG V LV+E D R +HS YGRR ++ + +A Sbjct: 712 YDQQRQYTGATSVSTDDRLVVEEELDRDSYRRRFYIHSTYGRRFNDGLSRLLAYHCAQQT 771 Query: 726 GADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 A+ + +D+G +P A + EP + +R A+ + L FR A Sbjct: 772 NANVKIAVADNGFTLVMPLNRKVDVGAVLESIEPAAVRSDLRSALDGTDLLKRYFRINAT 831 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 R+L++ R G+ QQ++ + LL A+ F VI ET RE L+D ++ A+E + Sbjct: 832 RSLMILKRYKGYEKSAAQQQVSSEMLLSFAEELDSFAVIDETYREILEDKLNVDAIEEAL 891 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL 905 R + E+ + V +PSP A L + SD LAE ++VL ++ + Sbjct: 892 RNIQDDELIVETVEVDSPSPRAFGL------ATLAASDVVLAEDESAVLQEFHARVQAEI 945 Query: 906 GQVDPG 911 G + Sbjct: 946 GDEETA 951 >UniRef50_Q46BX9 ATP-dependent RNA helicase n=4 Tax=Methanosarcinaceae RepID=Q46BX9_METBF Length = 955 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 244/960 (25%), Positives = 410/960 (42%), Gaps = 123/960 (12%) Query: 11 LPDVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRL 69 + + F P ++ F +PT Q +++ +H L+IAPTGSGKT +A L D + Sbjct: 6 IFNTFHPKIQEAIKTLGFTKPTEPQERSFPHIMDGKHTLLIAPTGSGKTESAVLPVFDNI 65 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 ++ E RK LYI+P++AL D+ ++I ++++V Sbjct: 66 LKKKPEA------RKGISALYITPLRALNRDMLSRIEIL------------GQLLDIKVQ 107 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSK 188 +R GDTP ER + ++NPPD+LITTPE+L M T SR R+ L V V+IDE+H +AGSK Sbjct: 108 VRHGDTPQSERQRQSKNPPDVLITTPETLQAMFTGSRLRQNLETVTHVVIDEIHELAGSK 167 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIR 247 RG LA+ LERL + QRIGLSATV + +++ FL G+ R TV+ ++ + Sbjct: 168 RGTQLAVGLERLVEISG-EFQRIGLSATVGNPWEISKFLAGNGRDFTVIEVALLKLLEFD 226 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 +V P + G E ++ I V +ST++F N+R AE Sbjct: 227 VVNPQVSEKGKIREKEVLKIAKAVGCEPEFASHLLC-IRKIVEDSQSTLIFVNTRQSAEA 285 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L A +L + HHGS+S E R Sbjct: 286 LAAGFRKLGTS---------------------------------IGVHHGSLSFEARVEA 312 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+A KSG L+ ++ TSS+ELGID+G VD V+Q +P V+ LQR+GRAGH++ VS+G Sbjct: 313 EEAFKSGALKGLICTSSMELGIDIGNVDRVVQYGSPRQVSRLLQRVGRAGHKLHSVSRGT 372 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRV 486 D +S I + GR+E ++P LDV+A Q +++D+ + Sbjct: 373 IVSMEVDDTAESMAITKAALEGRVEEVSPHIKSLDVVANQIAGMVMDFGEIEIDKILRIL 432 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 +R P++DL +D + + + + I+ R ++ + Sbjct: 433 QRTYPFRDLQLEELQRVVDQIGD----------YKLIWHEKGSNIVKRRRKSREYYYENL 482 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQI----- 600 IPD Y + + + VG LDE V + I WR+ ++ Sbjct: 483 SMIPDEKKYEIY-----DIVSGKSVGVLDEAFVVNFAEPGAIFITKGYMWRVVEMPDREQ 537 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD--------FLHLLADGAFFSGTI 652 +D++ V P G + +P W GE P E+ + +G L D A Sbjct: 538 GKDRIKVEPVEG-TGEVPSWTGEEIPVPFEVAQDVGKLRAEIAAFIRAELDDDAIAEQLQ 596 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 + N + + L+ E +P + +V+E D + L++ +G + Sbjct: 597 AKYPVTRNAVLELIRLVREHVEGGFPLPDAETIVIEDEGDA-----VTLNACFGHNTNGT 651 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTD-GKLPDAAIFLFEPEKLLQIVREAVG 771 A + + A +G+ + I +P + PE + I+ + Sbjct: 652 LARVLTSLLSARFGSSVAQEVDPYRIKLTLPRRVGSFQIRDMLLSLRPEHVEPIIEMTLK 711 Query: 772 SSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLREC 831 ++ L + A + + R+ +LLEI Y + E +RE Sbjct: 712 NTTLMKWKMVHVARKFGALSRDID-------YDRISMKKLLEI---YQGSSMYDEVIREI 761 Query: 832 LQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSD--APLAER 889 D+ D+P + ++++L GEI + + P+P + A F + D AP Sbjct: 762 FHDLLDVPRTKEVLKKLAAGEISV---EVSLPTPIGS-------AGFAMKKDLVAPEKAD 811 Query: 890 RASVLSLDSELLRN--LLGQVDPGELLDPQVIRQVEEEL------QRLAPGRRAKGEEGL 941 R+ VL+L ++ + +L + + + ++ V EE+ R+ + EE + Sbjct: 812 RSIVLALKERIMNDRIILFCTNCKKWTSRRQVKNVPEEIVCPVCESRMIAALKPWEEEEI 871 >UniRef50_B1Y9J8 DEAD/DEAH box helicase domain protein n=5 Tax=Thermoproteaceae RepID=B1Y9J8_THENV Length = 937 Score = 651 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 248/1007 (24%), Positives = 414/1007 (41%), Gaps = 125/1007 (12%) Query: 8 SSLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 SS++ + P R+ R +PT Q + LVIAPTGSGKT A L L Sbjct: 9 SSVVFHLLHPLLREALKDRGISEPTEPQRMAIPEILAGNNVLVIAPTGSGKTETAMLPIL 68 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 ++ G E + +LYI+P++AL D+ ++ V Sbjct: 69 SKMLEGGVE-------KPGIYVLYITPLRALNRDLLDRIR------------WWGERVGF 109 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVA 185 RV +R GDT +R + ++ PP ILITTPE L ++T R E LR + V++DEVH +A Sbjct: 110 RVDVRHGDTDKADRQRQSKTPPHILITTPEMLQAIMTGRRLLEHLRELRWVVVDEVHELA 169 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHP 244 KRG L+++LERL + Q +GLSATV S +VA FL GD RP VV R+ Sbjct: 170 EDKRGVQLSVALERLRYHVGRDFQIVGLSATVGSPVEVAKFLVGDGRPFKVVLVSFARYM 229 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 ++ + P + +D R I V +RST+VF N+R + Sbjct: 230 KLDVARPKPDEEDHKIAEVSGLFPDVVARLRY--------IKRLVEENRSTLVFVNTRSM 281 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AE L R ++L+ HH S+SK R Sbjct: 282 AELLGFRFSQLFNDLP-------------------------------IAVHHSSLSKMVR 310 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E+ LK GEL+ VVATSSLELGID+G VDLV+Q +P V LQR+GR+GH++ V Sbjct: 311 ISVEERLKKGELKAVVATSSLELGIDIGHVDLVVQYISPHQVTRLLQRVGRSGHRLTSVP 370 Query: 425 KGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWY 483 +G+ D++++ V+V+ +G +E P P DVL Q VA + +++E + Sbjct: 371 RGVVVGEDINDVIEAVVVVKRARSGLVEPTQIPRKPYDVLVNQVVAFLMLKPRWRLEELH 430 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ---L 540 ++RA P++DL + + + P+L + E + ARP + Sbjct: 431 QVIKRAYPYRDLTIEELRRVVKFM---------NDLYPRLAFYYEDSDVVARPRGRGFYR 481 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQ 599 + IPD Y+V+ + VG LDE V E V W I Sbjct: 482 YFYETLSMIPDERQYAVVNEK-----TGELVGTLDESFVAEYGNVGVKFIFRGRPWLITG 536 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 I + V + +P W GE P E+ + +G L A G + E Sbjct: 537 IEERSIKVVEVSDPTGAIPSWIGEEIPVPYEVAQEVG-LLRRRAQGGDHRAIAEEYGVNE 595 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + I +EE G +P + +V+E+ R+ + +I+H+ +G +V+ + Sbjct: 596 DVARYI---VEEMSKHRGPLPDDKTVVIEQFRENV----VIVHAAFGTQVNRTLGKLVGE 648 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAA----IFLFEPEKLLQIVREAVGSSAL 775 + + GI+ + + + + ++ ++++ A+ S Sbjct: 649 LLIKALEKPVGIHQDPYGIIIQSAEPLAAELVGEQLRRLATLDVREIAELLKSALVKSGS 708 Query: 776 FAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDV 835 F R A + + + + ++ + + V E LRE L+ Sbjct: 709 FKRRILHVAKKMGAVDKDADVYSVSMS----------KLVEAFSGTVVFDEALRETLERD 758 Query: 836 YDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 DL +++R+ GEI + + SP Y+ E +Y+ + Sbjct: 759 LDLEHTVDVIQRMRNGEIAVV----YSASP-------TYLGEVLYEK------LSHRLEI 801 Query: 896 LDSELLRNLLGQVDPGELLDPQVIRQVEEE-----LQRLAPGRRAKGEEGLFDLLRELGP 950 + E L+ L+ LL+ ++ V ++ L R+ + + Sbjct: 802 IPPERLKRLVLDSTKARLLNYTMLA-VCQDCGWHGLVRVGEVTELVCPRCGGVNVGVVRV 860 Query: 951 MTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDA 997 + ++L + +EEV E L + ++ + + +++ Sbjct: 861 VRSDNLEREAKRGAEEVRRTAELLRRYGWVGLYALASRLPIEAVEEV 907 >UniRef50_UPI0001745EC8 large helicase-related protein (lhr-2) n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745EC8 Length = 879 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 252/925 (27%), Positives = 389/925 (42%), Gaps = 112/925 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D PA WF F +PT Q T + L+ +PTGSGKTLA FL LD L Sbjct: 3 DSLHPALAAWFTGRFGKPTHAQEVTLPHVLAGQSVLLTSPTGSGKTLAGFLGVLDDLLHR 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E + +Y+SP++AL D+Q+NL PL + + ++R+G+R Sbjct: 63 ----LDEGPLPHQTLAIYVSPLRALTYDMQKNLSEPLHEMGLAQ--------DIRIGLRN 110 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGA 191 GDTPA ER+K + PP IL+TTPESL ++L RE L G VI+DE+HA+A +KRG+ Sbjct: 111 GDTPASERAKFRKQPPHILLTTPESLAILLPQEGYREILSGCRHVIVDELHALAENKRGS 170 Query: 192 HLALSLERLDALLHTSA-----QRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQ 245 HL+L+LERL+ ++ RIGLSAT ++A FL G R +V A R + Sbjct: 171 HLSLTLERLEQMVSAPPDGAGLVRIGLSATAAPLDELARFLCGTGRDCAIVQGRAERRRR 230 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + ++ P+ G + + V + RSTI+F N+R A Sbjct: 231 VEVLSPLR--------------REPYPPAGWTAQRVMKDLARLVEQKRSTIIFCNTRSGA 276 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E + RL + + +HH S+ ++ R Sbjct: 277 ESTSLRLKQALPE-----------------------------LASVIETHHSSLDRDLRL 307 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E LK+GELR VV ++SLELGID+GAVD + ++TP V+ +QRIGR+GH + S Sbjct: 308 EVEDRLKAGELRAVVCSTSLELGIDIGAVDCAVMISTPKGVSRAIQRIGRSGHNIHEESH 367 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 G+ DL++ V + +L+ + P DVLAQ V A D Y+ Sbjct: 368 GVLVATNVNDLMECVVCADMTRRTQLDAIRVLQKPYDVLAQHLVGMAMQKGYTRDTAYAT 427 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPSGD--FSAFRPKLVWNRETGILTARPGAQLLAV 543 V +A P+ +L R FD L + G S + + K+V + + ++T + + Sbjct: 428 VLQAWPYHELSRAEFDRVLQYVMGGGKSLEENYREVFGKIVEDAQGRLMTPNRKVERDYL 487 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 + GTI G V L G+RR+GE++E V + DI L + R+ + Sbjct: 488 VNIGTIASEGAVRVYL-------GTRRLGEVEESFVKNLKYGDIFVLAGRTVRLVETGVM 540 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFF--------SGTIPPW 655 ++ V A GR +P W + L + + LA + + Sbjct: 541 EITVEAADGRLPTVPSWNANKMPLASGLAQEVTRLRTRLAARLEANEPPAATSDWLVEDY 600 Query: 656 LAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW------------------ 697 L I Q + +P ++E R+ D Sbjct: 601 LISSVNADAIVKHCRNQCRFS-AIPTDSLFLIELYREPEDDGEEFREPEPSLMPPKRGAG 659 Query: 698 -----------RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTD 746 HS GR ++ + IA R+ G +A V D G + + Sbjct: 660 RAMRKPDPERCHFFFHSLIGRSANDALSRIIAHRVKEAVGGNALVTIDDYGFLLSVRQFQ 719 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 + LF + L +R A+ S L +FR A L++P PG L Q R Sbjct: 720 ELGLEEWRDLFHADNLEADLRSALAESQLVKWQFRGVAQTGLMVPRNLPGAERRLKQLRW 779 Query: 807 RASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSP 865 L ++ + PD P++ + +RE DLP + + + + Q+ +V +P Sbjct: 780 SGEILFQVLSKHEPDHPLLEQAIREATHVFLDLPRAAQFLAGAHQMQWQLIEV--PVVTP 837 Query: 866 FATSLLFGYVAEFMYQSDAPLAERR 890 F+ + + E M D A R Sbjct: 838 FSFGIYASKIKESMLLEDPEEAIER 862 >UniRef50_Q649R1 ATP-dependent helicase n=4 Tax=environmental samples RepID=Q649R1_9ARCH Length = 961 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 265/1027 (25%), Positives = 411/1027 (40%), Gaps = 132/1027 (12%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 +P + + F PT Q + ++ L+IAPT SGKT AA L LD L R Sbjct: 13 NPIQKAIAEKGFSYPTEPQTRAIPYITEGKNVLLIAPTASGKTEAALLPVLDALIR---- 68 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 + ++LYI+P+KAL D+ LQ K ++LR+G+R GDT Sbjct: 69 ----TERGAGIKVLYITPLKALNRDMLERLQWWCK------------RLDLRLGVRHGDT 112 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRGAHLA 194 +ER PPDILITTPE+L ++ R R+ L V+ VI+DEVH +A KRG A Sbjct: 113 SNREREAQAMAPPDILITTPETLQAIIPGRIMRQHLAVVKWVIVDEVHELACDKRGTQFA 172 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVA 253 L+LERL L Q IGLSAT+ S VA FL G +R ++N P R + + P A Sbjct: 173 LALERLRYLKKAEFQVIGLSATIGSPDRVAKFLVGTERECEIINVPVARSIAVEVFYPRA 232 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 + D A R + V H+ST++FTN+R + E L +R Sbjct: 233 DSADYKLAEELYTYPEVAARLQLMK--------KLVEEHKSTLIFTNTRSITEILGSRFR 284 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 F+ HHGS+SK R E+ +K Sbjct: 285 VWD-------------------------------LNFLVGVHHGSLSKPSRLNVEKGIKD 313 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G+L+ ++ TSSLELGID+G +D VIQ +P V LQRIGR+GH++GG++ G + Sbjct: 314 GKLQGIICTSSLELGIDIGRLDFVIQYNSPRQVTRLLQRIGRSGHRIGGIANGAIVVQDS 373 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPW 492 D ++S VI LE P PLDVLA Q A +E + +++A P+ Sbjct: 374 DDALESLVICRKALIDDLEPAGIPERPLDVLAHQIAGLLMAQGRWSFEEALALIKKAYPY 433 Query: 493 KDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL----LAVTSGGT 548 +DL + + L+ + R P+L+W + RP Sbjct: 434 RDLEEQELVSVLNYMHSRI---------PRLLWFSAEEKVFIRPKQIKPLYNYYFEHLSM 484 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIV 607 IP+ + V+ + VG LDE V E ++ + G W+I + D++ V Sbjct: 485 IPEVRQFLVI------DDDDKPVGVLDEAFVAEYAKAGNKFIEGGRVWKILHVYGDRIYV 538 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD--------GAFFSGTIPPWLAEE 659 + +P W GE P + +G L + + + E Sbjct: 539 KHEDDPTGAIPSWVGEEIPVPYPVANEVGKIRGGLEEELESGKAVAEIGKELVQRYSCSE 598 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 TI + EQ VP + L LER + IIL +G V+ A+ +A Sbjct: 599 QTITRALDEVIEQEKGGYPVPTDKLLTLERWNE-----YIILQCSFGLLVNRTLAMILAT 653 Query: 720 RIHALWGADASVVASDDGIVARI-PDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 I GA V I+ R + + + +A I + ++ +++ S LF Sbjct: 654 VISDKIGAPVGVQQDPYRIMLRTESELEPEEVEAIILALSTGAIEKLAIDSLVRSRLFKH 713 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 RF A R + + L L + + + V E +RE D+ Sbjct: 714 RFIHVARRFGAIVKKAS----------LSDLDLDNLIRSFEGSAVFNEAIREAQDKDVDI 763 Query: 839 PALERLMRRLNGGEIQISDVTTTTPSPFA------------------TSLLFGYVAEFMY 880 L++++N GE++IS + SP A ++ YV + Sbjct: 764 KQTVGLLKQINEGELKISVLKGDDVSPVAGIVEVIKRGYELIPPDRMHKVIIKYVKARLL 823 Query: 881 QSDAPLAE----RRASVL---SLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGR 933 R +VL +D+ + +D +++++ +++ GR Sbjct: 824 DESLTFVCTNCWRYVAVLRIHDVDALQCPECESKRIGAVQVDEELVKREIRKVKSKKEGR 883 Query: 934 RAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLAC 993 K +L+ G + LA + E+ LE AV +I E+ Sbjct: 884 VVKDAIKSAELVSNYGKAALLTLAGKGIKP-EDATEILEEEGAVNEHLIGLIIESEKEVL 942 Query: 994 MDDAARL 1000 R Sbjct: 943 KRRFYRR 949 >UniRef50_A8MBG3 DEAD/DEAH box helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBG3_CALMQ Length = 970 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 242/921 (26%), Positives = 393/921 (42%), Gaps = 111/921 (12%) Query: 15 FSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 P ++ R F++ T Q + V ++ L+IAPTGSGKT AA L L Sbjct: 14 LHPMVKELVVKRGFRELTEPQLKAIPVILSGKNTLLIAPTGSGKTEAALLPVLSMYLN-- 71 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 K + ILYI+P++AL D+ R ++ + V L V +R G Sbjct: 72 ----MPQDKPRGIYILYITPLRALNRDLLRRIE------------WWASGVGLTVAVRHG 115 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 DT ER++ +RNPP +LITTPE+L ++ + SR RE + V+ VI+DEVH + KRG+ Sbjct: 116 DTDKNERARQSRNPPQLLITTPETLQILFIGSRLREHISKVKWVIVDEVHELVEDKRGSQ 175 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP-VTVVNPPAMRHPQIRIVVP 251 L++ L++L AL Q IGLSA+V S S+VA FL G+ V+N R+ Q ++ P Sbjct: 176 LSIGLQKLKALAG-RFQVIGLSASVGSPSEVAKFLVGNDEECEVINLSFTRNYQFDVINP 234 Query: 252 -----VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH-RSTIVFTNSRGLA 305 A+++++ + + + +++ + +S+IVF N+R +A Sbjct: 235 AVSLSNADINELKARYMIVNNINADELFHNDALARLLYVMNLIDDGGKSSIVFVNTRSMA 294 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E LT+R+ + + + HH S+S+ R Sbjct: 295 ELLTSRI-------------------------------LMINPTYPVSIHHSSLSRVNRL 323 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 TE+ L+ G L+ VVATSSLELGID+G VD VIQ +P V +QR+GR+GH++ V K Sbjct: 324 NTEEMLRGGRLKAVVATSSLELGIDIGHVDQVIQYVSPHQVTRLVQRVGRSGHRLDKVPK 383 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYS 484 G+ D +++ IV AG LE P P DVL Q V+ M VDE + Sbjct: 384 GIIITEDINDTLEAIAIVNRARAGWLEPTKSPEKPYDVLFNQIVSLILMKPRWTVDEILN 443 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA------ 538 V+ A P+++L R A L +S RP+LV+ E + +P + Sbjct: 444 IVKGAYPYRNLTRDELIAVLRFMSEG--------LRPRLVYFIEEEGVVLKPRSPRSRIE 495 Query: 539 -QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWR 596 + + IP+ Y V + VG LDE + E W Sbjct: 496 LREYFFNNLSMIPEEKQYLVTRVD-----TGEVVGVLDEAFMAEYGEPGIKFVFRGNVWI 550 Query: 597 IQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG--------AFF 648 ++ I D + V PA +P W GE P E+ + +G ++ D A Sbjct: 551 LRSIKDDVIYVEPAKDPVGAIPSWIGEEIPVPFEIAQDVGRLKRIITDELRNGASEDALI 610 Query: 649 SGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRR 708 S T+ I I+EQ G VP +++E+ +++H+ +G Sbjct: 611 SRLTKELGVSRRTVKYIVSTIKEQLKY-GFVPTDDSIIIEKV-----GELVVVHASFGTL 664 Query: 709 VHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAA----IFLFEPEKLLQ 764 V+ + +A + V I+ ++P G + + +Q Sbjct: 665 VNRTLSRLLASYMTHALDLPVRVQQDPYAIILQLPSKVGPGIIIESLRALANLSMSEFIQ 724 Query: 765 IVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVI 824 ++ + LF + A R ++ + L + Q PV Sbjct: 725 YIKRIALETGLFKRKVVHVARRFNVIKSDKS----------VSDISLTNLIQALEGTPVY 774 Query: 825 LETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDA 884 +E LRE + D+ R+++ + G I++S + + SP A +L + + A Sbjct: 775 VEALREFITSDLDVDGAVRVLKSILDGTIKVSVIEGSEFSPMAREILSKASSR--LEVIA 832 Query: 885 PLAERRASVLSLDSELLRNLL 905 P + + S+ + LL L Sbjct: 833 PERLDKLIIESVKARLLNEPL 853 >UniRef50_B4D6Q0 DEAD/H associated domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Q0_9BACT Length = 844 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 241/897 (26%), Positives = 383/897 (42%), Gaps = 82/897 (9%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P SS P F WF + PT Q W AR E+ L+ +PTG+GKT AAFL Sbjct: 2 PVESSASPSAF-----AWFADRYGTPTPAQEAAWPRIARGENILLASPTGTGKTFAAFLG 56 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 LD L + R +Y+SP++AL D+++NL PL+ + + Sbjct: 57 VLDELVQLHA----RGELRDAIHCVYVSPLRALSYDLEKNLLEPLREL-------YGDQP 105 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHA 183 +RV +RTGDT + ER++ PP L+TTPESL ++L+ R L V +I+DE+HA Sbjct: 106 PIRVQLRTGDTTSSERARQYTKPPHFLLTTPESLCVLLSQERWLVHLSRVRWLIVDEIHA 165 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDR-PVTVVNPPAMR 242 +A +KRGAHLALS+ERL QRIGLSAT+ +VA FL G ++ + + Sbjct: 166 LAENKRGAHLALSIERLAHHCG-QLQRIGLSATIAPLDEVARFLVGTHGTCATLDVSSSK 224 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 ++ + P+ + +G + + D + +H++T+VF N R Sbjct: 225 KVKLSVHTPLRKNPYPEAGYTG--------------QRMIRELGDLIRKHQTTLVFCNVR 270 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 AE T L E + + HH S+ ++ Sbjct: 271 SGAEATTYWLRENF-----------------------------PDLADVIECHHASLERD 301 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 R E LK GELR VV ++SLELGID+G+VDLV+ ++TP V+ LQR GRAGH + Sbjct: 302 VRRDVEDRLKRGELRAVVCSTSLELGIDIGSVDLVVMMSTPKGVSKALQRAGRAGHNIRS 361 Query: 423 VSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 +S+G+ DLV+S V A +L+N+ P +PLDVLAQ V+ + + Sbjct: 362 ISRGILMATNISDLVESCATVLLSRARQLDNVRMPESPLDVLAQHVVSMGCTEHWTRTDA 421 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG--DFSAFRPKLVWNRETGILTARPGAQL 540 + +R+A P++DL +FD LD L+G S +S K+V + + G T + Sbjct: 422 LALIRKAYPFRDLDAGMFDDVLDYLAGGGASLRQRYSEVFGKIVLDAD-GFRTREGRVRR 480 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQI 600 + + G IP+ G V R +G ++E + + ++ D+ + R+++I Sbjct: 481 EFLQNIGVIPNVGQVQVRTKT-------RLLGSVEESFIRQIKIGDVFMIAGRPVRLEKI 533 Query: 601 TRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS------GTIPP 654 T+ + VT A G +P W + + I F L Sbjct: 534 TQMEAWVTKADGALPTVPRWNANKMPLSNRVAQEINAFRKELRAAFEEGRKDVDKWIAKR 593 Query: 655 WLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWA 714 + + Q + I LV E +E G HS GR ++ A Sbjct: 594 LDCGKANAEILLKTHLAQHELSEIPTADFLLVEELEDEEQGALHYFFHSLIGRTSNDALA 653 Query: 715 VAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSA 774 I R+ G +A D G V + + L PE + + EA+ S Sbjct: 654 RVITRRLSEARGGNAIATPHDYGFVLTVAKRQRFVEADFPRLLSPEGFDEALDEALRQSD 713 Query: 775 LFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQ 833 + FR A L++ + + + + A + + Q + P+ ++ E R+ LQ Sbjct: 714 MLKYHFRNAAQTGLMVYRNYFDRQKSVRKLQWSAEVIFNVLQQHEPEHVLMREARRDALQ 773 Query: 834 DVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDA-PLAER 889 D + + + P + ++ + E + D ER Sbjct: 774 TFIDAEGAREFL--IAQTRKPVRLRRVPMVPPLSFAMYATKIKEALLVEDPYETMER 828 >UniRef50_Q11PA5 ATP-dependent helicase n=2 Tax=Sphingobacteriales RepID=Q11PA5_CYTH3 Length = 813 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 192/860 (22%), Positives = 355/860 (41%), Gaps = 80/860 (9%) Query: 21 DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREA 80 WF +P Q TW LV APTGSGKT + + L ++ + + Sbjct: 8 AWFKNQKWKPHLFQQDTWKAMLEGYSGLVNAPTGSGKTYSVWFGILLEYLQKHPDYKTKT 67 Query: 81 HKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQER 140 + + ++I+PI+AL +++ +R + ++ V IR+GDT + ++ Sbjct: 68 KQ--GLQAIWITPIRALAKEIE----------YSTKRSCIDLDIPFEVAIRSGDTTSAQK 115 Query: 141 SKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLALSLER 199 +K +N P +L+TTPESL+L+L+ + + + + TV++DE H + GSKRG + L+L R Sbjct: 116 TKQKKNMPQLLVTTPESLHLLLSQKGYADVFKNLSTVVVDEWHELIGSKRGVQMELALSR 175 Query: 200 LDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDD 257 L L + + G+SAT+ + + L G P ++ + +I V P + Sbjct: 176 LKGL-NPMLKIWGISATIGNLEEAKDVLLGKYGNPTKMIRAELPKRVEIETVFPDKIEN- 233 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 G + + ++ + S ++FTN+R +E +L ++ Sbjct: 234 -------------FPWSGFVGTKLVPKVIPIIHNSHSVLIFTNTRSQSEIWYRQLLDVAP 280 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 + HHGS+ ++ R E L +G+L+ Sbjct: 281 E-----------------------------FAGLIALHHGSLDQKTRTWVEDNLHAGKLK 311 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLV 437 V+ TSSL+LG+D AVD V+QV +P VA +QR GR+GH G +SK F P +++ Sbjct: 312 AVICTSSLDLGVDFSAVDTVVQVGSPKGVARFMQRAGRSGHSPGALSKIYFVPTNSLEII 371 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 + A + E + +E+ P DVL Q V A D + + Y +++ + + Sbjct: 372 EGAAMREAIKRNVVESRVPYVRSFDVLVQYLVTLAVSDGFRPEIIYEEIKKTFCYASVTP 431 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 F L ++ S D K++ +T+R A S GTI V Sbjct: 432 EEFAWALQFITNGGNSLDAYDEFHKVIIEEGIYKVTSRAIATR-HRLSMGTIVSDSAMQV 490 Query: 558 LLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARL 617 +R+G ++E + + + D+ + I I V+V + + + Sbjct: 491 KYM------SGKRLGSIEESFISKLKPGDVFWFSGNNLEIVHIHHMDVLVRKSKAKKGMI 544 Query: 618 PFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATG 677 P W+G ++L EMI + D L E + + Sbjct: 545 PSWQGGRMPLSSQLAEMIRYKIDHFFDAGAIEEEELNKLKELFDL----------QAKRS 594 Query: 678 IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG 737 +P ++ ++E + G + + ++ GR VHE A ++ +I + SV +D G Sbjct: 595 HLPTNKEFLIEYVQSREG-YHVFMYPFEGRFVHEGMAAIVSHKISEIQPITFSVAMNDYG 653 Query: 738 IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGH 797 + LF + L + ++ +V ++ + RFRE A+ A L+ PG Sbjct: 654 FELLSDQEIPIEEALELDLFNIDNLEKEIQLSVNATEMARRRFREIASIAGLVFQGYPGK 713 Query: 798 RTPLWQQRLRASQLLEIAQGYP-DFPVILETLRECLQDVYDLPALERLMRRLNGGEIQIS 856 + A ++ + Y + ++ + E L ++ + + R+N ++ Sbjct: 714 SAKTRHLQANAELFFKVFEQYDSNNLLLRQAYDEVLDFQLEIRRMRKAYNRINEQ--KLV 771 Query: 857 DVTTTTPSPFATSLLFGYVA 876 V P+PFA ++ + Sbjct: 772 LVRPDKPTPFAYPIMVDRMR 791 >UniRef50_B5ICF6 DEAD/DEAH box helicase domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5ICF6_9EURY Length = 890 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 217/907 (23%), Positives = 373/907 (41%), Gaps = 137/907 (15%) Query: 13 DVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 + P+ + + +PT Q + ++ L+++PTGSGKT AA L +L Sbjct: 3 ETLHPSIQKVLEEKGIFEPTEPQREVIPYILEGKNVLLVSPTGSGKTEAAMLPIFHKLVD 62 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 +YI+P++AL D+ + L+ ++ LR+ +R Sbjct: 63 GNYGKIA---------CIYITPLRALNRDLLKRLEDF------------GKKLGLRIAVR 101 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRG 190 GDT A ER +L+ +PPD+LITTPE+ +M L R +E+L+ V+ V+IDE+H +A +RG Sbjct: 102 HGDTTAYERRQLSLHPPDVLITTPETFQIMFLGKRLKESLKSVKFVVIDEIHELASDERG 161 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 A LA+ LERL + Q IGLSA+V + ++A FL + + +V + + I Sbjct: 162 AQLAVGLERLRKMT--RFQVIGLSASVGNPEEIAKFLSPNESIEIVKVKLRKRIDVNIRA 219 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + + + + +A +W +E+ + R+T+VFTN+R AE + Sbjct: 220 PQKKYEKEAQIM--GSDVDYASTLMEMW--------EEINKARATLVFTNTRCTAEDIGM 269 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 R L+A HHGS+S++ R E Sbjct: 270 RYRLLFANPP-------------------------------IEVHHGSLSRKVRIEAEDK 298 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 K GEL+ ++ TSSLELGID+G VD VIQ +P V LQRIGRAGH++ VS+G F Sbjct: 299 FKRGELKALICTSSLELGIDVGIVDFVIQFNSPRQVTKLLQRIGRAGHRIDEVSRGTIFA 358 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRA 489 T +L +SA I+ + GR+E++ PL VL Q VA A + + E Y ++ A Sbjct: 359 HTPVELWESASILSLLHEGRIESVKIREKPLMVLINQLVAMANSEGKMNAREAYEIIKNA 418 Query: 490 APWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 P+++L F+ L+ + K+ ++ G + + I Sbjct: 419 YPFRNLSFEEFEDILNFMKD----------IGKVWYDGIA--FGKTRGGREYFYQNISMI 466 Query: 550 PDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 PD +Y V+ G+ +G LDE V + + +WRI I D+V+V Sbjct: 467 PDEKLYKVITLHGDF------IGTLDESFVSTLNYGESFVMNGMAWRIVDIREDKVLVEY 520 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLI 669 A P W GE P ++ D +L + + W + Sbjct: 521 LR-DIAMPPSWVGEEIPVPYQVASHEPDMKYL---NSAAKKILENWKMDW---------- 566 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 +V+E G+ + + G + + A+ ++ + G Sbjct: 567 -----------NEGRIVIEN-----GNGIVFIGVRGGSKANYTLALILSSILSQKIGESV 610 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 S I P + + + +VR +S LF F A + + Sbjct: 611 EFSVSPYHIALFNPHVNAPYIKELLEKLR--NVEGLVRLVAKNSRLFNYIFMHVAKKMGV 668 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + + ++ +I Y P+ E L + D D+ + ++ ++ Sbjct: 669 IKKGADMKKV----------RIEKIVDAYKGTPLYKEVLNKMSFDYMDVEVVNLILEKIR 718 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN--LLGQ 907 G+ +I + S +L + + +P+ R + ++ LL +L Sbjct: 719 EGKTEIIVREMSDKSK----ILLEEHGDLV----SPIIATRPIIEAVQKRLLEEDMILAC 770 Query: 908 VDPGELL 914 + G+ + Sbjct: 771 LSCGKSI 777 >UniRef50_B1ZZM6 DEAD/H associated domain protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZM6_OPITP Length = 900 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 238/944 (25%), Positives = 369/944 (39%), Gaps = 121/944 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + S L P WF R F + Q L+ +PTGSGKTLA Sbjct: 6 VTSPAFTESRLYAALHPDLAAWFRRRFAHFSPAQLHAVPEVLAGNSLLLTSPTGSGKTLA 65 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 AFL D L R +Y+SP++AL D+++NL P++ + + Sbjct: 66 AFLSVFDWLARARD----RGELPNGIVAVYVSPLRALAYDLRKNLAEPVRELGWDW---- 117 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIID 179 LRVG RTGDT ER+ R PP I +TTPESL LML+ +I D Sbjct: 118 -----LRVGARTGDTSPAERAAQRRKPPHIFVTTPESLTLMLSQPGWIAAFTSTRFLIAD 172 Query: 180 EVHAVAGSKRGAHLALSLERLDAL-------------------------------LHTSA 208 E+HA+A +KRGA LA++ ERL+ + Sbjct: 173 ELHALAENKRGAMLAVAAERLEEFPIAERRSPNVPAPPPHVPGDPTASSQSAIENQKSKI 232 Query: 209 QRIGLSATVRSASDVAAFLGGD-RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 RIGLSATV VAAFL G RP + + +I + P+ Sbjct: 233 IRIGLSATVAPLETVAAFLVGPGRPCRIAEVTQTKPAKIEVFSPLR-------------- 278 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 + G + + + +H++T+VFTN+R AE + RL Sbjct: 279 EHAYPPAGYTATRVLAELSVLLEKHKTTLVFTNTRSGAESIGLRL--------------- 323 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 +++ + HH S+ + R E LK GELR VV ++SLE+ Sbjct: 324 --------------KQLRPELSDLIEVHHASLDRGVRLEIEDRLKRGELRAVVCSTSLEM 369 Query: 388 GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMF 447 GID+G++D+V+ V+ P V+ LQRIGR+GH +G +S G+ DL + AV M Sbjct: 370 GIDIGSIDVVVMVSAPKGVSRALQRIGRSGHSMGRISHGILVASNINDLAECAVTARMMA 429 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDML 507 LE + NPLDVLAQ V A + DE ++ VRR+ P++DLPR F+ L L Sbjct: 430 RRELEPVKIHENPLDVLAQTLVGLAIFGSETPDEAFALVRRSYPFRDLPRATFERVLRYL 489 Query: 508 SGRYPSGD--FSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK 565 G S + + K+ + ++ P + GTI M + L Sbjct: 490 RGGGVSLERNYENVFGKVRVDASGQLVLTSPRVARSFYQNIGTINTESMVQIRL------ 543 Query: 566 AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGN 625 G R +G+++E + R D+ L R+ + V A +P W Sbjct: 544 -GRRNLGQVEESFMRGLRPGDVFVLNGRCVRLVKTHLLSAQVVRADHALPTVPRWYANKM 602 Query: 626 GRPAELGEMIGDFLHLLADG------------------AFFSGTIPPWLAEENTIANIQG 667 + L + +A S + + Sbjct: 603 PLASGLAAEVVRLRTEVAKRLGGSAGVPPASGQPAGETPALSWLRSEYGLSAANARALID 662 Query: 668 LIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA 727 Q + +P + ++ER R E H+ GR ++ + +A R+ +L G Sbjct: 663 HFSLQAQIS-AIPTAGVFLIERYR-EGDLLHYFFHALIGRSANDALSRIVAQRVQSLKGG 720 Query: 728 DASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 +A V D G + + L + +R A+ ++L +FR A Sbjct: 721 NALVTIDDYGFLLSLRSFQAMEEPELRTLLVRDGAEDALRLALADASLVKWQFRGVAQTG 780 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMR 846 L++P R G + A + E+ + + PD P++LE E DLP + Sbjct: 781 LMVPRRVHGVERGTRMLQWSAEIIFEVLREHEPDHPLLLEAYAEATLRFLDLPRALGFLE 840 Query: 847 RLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERR 890 +++ ++ SPF+ + + E M D R Sbjct: 841 QVD--RLRWDIRDLPRVSPFSFGIYVSKIKETMTLEDPETTIER 882 >UniRef50_Q3IP60 Lhr-like helicase n=5 Tax=Halobacteriaceae RepID=Q3IP60_NATPD Length = 949 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 243/1017 (23%), Positives = 387/1017 (38%), Gaps = 129/1017 (12%) Query: 14 VFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 R R F PTA Q + A E LV+APTGSGKT A L L + Sbjct: 17 RLHDDVRQALSERGFSTPTAPQRKAIPTLAAGESGLVVAPTGSGKTETAMLPVLSSIQER 76 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 R + LYI+P++AL D++ L+ + + + +R Sbjct: 77 P--------PRHGIQALYITPLRALNRDMRERLE------------WWGETLGIDIDVRH 116 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT +R K +PPD+L+TTPE+L M T + R + +E +++DEVH +AGSKRGA Sbjct: 117 GDTTDYQRQKQAEDPPDVLVTTPETLQAMFTGEKLRRAIEDIEHIVVDEVHELAGSKRGA 176 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 L + LE L QRIGLSATV ++V FL GDR V + A + + + P Sbjct: 177 QLTVGLEHLREHAGP-FQRIGLSATVGDPTEVGRFLTGDRGCHVTDVEAGTNLDVTVRTP 235 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 +D ++ + A I + V H S ++F N+R AE L +R Sbjct: 236 EIRPEDRTAAGELLTDAEVASHVRVID--------ELVDAHDSVLIFVNTRQTAEGLGSR 287 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L HHGS+SK R E A Sbjct: 288 LKAYGTN---------------------------------IGIHHGSLSKSARIDVEDAF 314 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 K+GE+ ++ TSS+ELGID+G +D VIQ A+P V LQR+GRAGH+ S G Sbjct: 315 KTGEIDGLMCTSSMELGIDVGDIDHVIQYASPREVRRLLQRVGRAGHRRDETSSGTVITT 374 Query: 432 TRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAA 490 D ++ IV+ G +E+ H LD +A Q + L Y + RA Sbjct: 375 HPDDTFEALSIVDRAERGAVESAGIHHGSLDTVANQIAGLLMGFEELPAARAYEILTRAY 434 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 P+++LP F A + LS L + G + IP Sbjct: 435 PFRNLPEEQFKAVVRELSENR----------ILWLEEGDDRIEKSGGTWQYFYANLSMIP 484 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWR--IQQITRDQVIV 607 D Y+V + A VG L E V + + G WR ++V+V Sbjct: 485 DEANYTV-----TDMASGDPVGTLAERFVVTFAEPGETFVQGGEMWRITEIDDEEEEVLV 539 Query: 608 TPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL--------ADGAFFSGTIPPWLAEE 659 +P + +P W G+ P + E + GA + +E Sbjct: 540 SPIEDPTGEVPSWVGQEIPVPRGVAEAVATARADARGRFDGGDGRGAVARSVADRYPTDE 599 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 +T + +E + G +P +V+E +I+L++ +G +E ++ Sbjct: 600 HTASEALKPVEAHK---GPIPTPDRIVVEGF-----GRQIVLNAAFGHTANETLGRLLSA 651 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGK-LPDAAIFLFEPEKLLQIVREAVGSSALFAA 778 I G ++ I +P + +P+ + +V ++ ++ Sbjct: 652 LIGQQTGGSVAMEVDPYRIELEVPSGTSIGDVVELLETTDPDHVPTLVELSLKNAETLKF 711 Query: 779 RFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDL 838 + AA+ + T Q R +LL D P+ E +R L + D+ Sbjct: 712 TLAQVAAKFGALKRW---KGTGSSQNRFGKDRLLAAL---EDTPIYDEAVRVVLHEQLDV 765 Query: 839 PALERLMRRLNGGEIQISDVTTTTP-------------SPF-ATSLLFGYVAEFMYQSDA 884 ++ RL G+I+++ V T SP A + + V E + D Sbjct: 766 DGASDILSRLQSGDIELATVGERTALGQAGRSSGRELLSPENADASVVETVKERILDDDV 825 Query: 885 PLA-------ERRASVLSLDSELLRNLLGQVDPGELLD--PQVIRQVEEELQRLAPGRRA 935 LA +RR +V +D + L G L +V+ V + + + Sbjct: 826 LLACLHCKEWDRRQTVKRVDDQPECPLCGSTRIAALNPWADEVLEAVRTDDKDDDQQKAT 885 Query: 936 KGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLA 992 + +++ G V LA R G + + +I + + A Sbjct: 886 ERAYKAASIVQSHGKRAVIALAARGVGPRNAAYIINNHREEEADFYRDIIERERQYA 942 >UniRef50_A4CH41 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=13 Tax=Bacteroidetes RepID=A4CH41_9FLAO Length = 834 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 207/897 (23%), Positives = 361/897 (40%), Gaps = 76/897 (8%) Query: 1 MADNPDPSSLLPD--VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 MA P+ PD DWF R P Q +TW H L+ APTGSGKT Sbjct: 1 MAGPKHPTGQPPDTDALMAIASDWFKRQGWDPFPFQHKTWAAFMEGRHGLLNAPTGSGKT 60 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 A + L R+ +K + ++I+P++AL ++ ++ + + + Sbjct: 61 YALWFPILLEYMRQHPNFR--DGHKKGLKAIWITPLRALSREIHQSAERITRDL------ 112 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVI 177 ++ VGIRTGDT + ER++ + PD+LITTPESL L+L T ++ ++ Sbjct: 113 ----DIPFEVGIRTGDTSSAERARQRKILPDLLITTPESLQLLLATKGYKKLFADCYAIV 168 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +DE H + GSKRG + L+L RL + + G+SAT+ + L G + N Sbjct: 169 VDEWHELLGSKRGVQMELALSRLKTICPA-LRIWGISATIGNLEQARQVLLGPESGALEN 227 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 +R ++ + G + ++ ++ + ++T++ Sbjct: 228 SVLIRA---------QIDKKITVRSIIPDTMETFPWRGHLGLHLLEHVIPIIRNSKTTLL 278 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 FTN+RG E L E + HHG Sbjct: 279 FTNTRGQCEIWFRALLEKHPE-----------------------------LAGDIAMHHG 309 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 S+ K R EQA+++ LR VV TSSL+LG+D V+ V+Q+ P VA LQR GR+G Sbjct: 310 SIDKATRNWVEQAIRNESLRAVVCTSSLDLGVDFAPVETVVQIGGPKGVARFLQRAGRSG 369 Query: 418 HQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 H+ G S F P +L++++ + + + +E+ P DVL Q A D Sbjct: 370 HRPGRESVIYFLPTHAMELIEASALQQAVRKQAVEDRIPYLASYDVLVQYLTTLAVSDGF 429 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG 537 +E Y V ++ + R ++ L+ L S K+ + G Sbjct: 430 LPEEIYREVTGTFCYQAMSREDWEWLLNFLVMGSQSLASYDEYKKVEVLPDGLFKVTNRG 489 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRI 597 + GTI +V +G +G ++E + + D+ T + Sbjct: 490 VAMRHRFQIGTIVGDAHMTVKYQKGGY------IGTIEEWFISKLNPGDVFTFAGRNLEF 543 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA 657 +I V + +++++P W G +E + + L P Sbjct: 544 IRIRDMVAQVRNSSRKTSKVPSWMGGRLTLSSE----MSELLRE-----ELYSHRRPAGE 594 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 + I ++ L + Q+ + IVPG ++E + G + + GR VHE A + Sbjct: 595 QSREIRSLDALFKRQQLES-IVPGPDQFLIETFQSREGYHHL-FYPFEGRFVHEAMASLL 652 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 + RI L S+ +D G LF PE LL +++++ ++ + Sbjct: 653 SYRISLLSPITFSLAYNDYGFELLSDRELNIGVILDNDLFSPEYLLDDLQKSLNATEMAR 712 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVY 836 +FR+ A + L+ P + + + L E+ + Y PD + + RE + Sbjct: 713 RKFRDIAVISGLVFTGYPKKGIKMKHLQSNSQLLFEVFRDYEPDHLLFRQAFRETFEHQL 772 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 + L + + R++ EI T PF+ ++ + E + S LA+R + Sbjct: 773 EEGRLRKALERISRQEILWKACEKYT--PFSFPIITDRLREKL--SSEKLADRIRRM 825 >UniRef50_C1RMK0 Lhr-like helicase n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMK0_9CELL Length = 924 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 349/716 (48%), Positives = 434/716 (60%), Gaps = 68/716 (9%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 D FS TR WF AF PTA Q W + +HALV+APTGSGKTLAAFL+ALD L Sbjct: 4 DRFSDPTRAWFTGAFAAPTAAQTGAWEAVSGGDHALVVAPTGSGKTLAAFLWALDGLLT- 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 A + R++Y+SP+KAL TDV+RNL+ PL G+ R G + VGIRT Sbjct: 63 ---GEAPADPTQRCRVVYVSPLKALATDVERNLRSPLVGVRQAATRLGRALPEVTVGIRT 119 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 GDTP ER +PPD+LITTPESLYL+LTS AR L GV TVI+DE+HAVA +KRGAH Sbjct: 120 GDTPPAERRAFATSPPDVLITTPESLYLVLTSAARRGLAGVRTVIVDEIHAVAATKRGAH 179 Query: 193 LALSLERLDALLHT-----SAQRIGLSATVRSASDVAAFLGGDRP-------VTVVNPPA 240 LALSLERLDALL AQR+GLSATVR VA+FLGG RP V VV PP+ Sbjct: 180 LALSLERLDALLEAEGGPGPAQRVGLSATVRPVDAVASFLGGARPPAEGGRQVVVVQPPS 239 Query: 241 MRHPQIRIVVPVANMDDVSSVAS---------------------------------GTGE 267 + +++VVPV ++ D+++ A E Sbjct: 240 QKVIDVQVVVPVPDLGDLAAAARPGASGTTPGTVDRYGGPGIDPDLAGFGAPAPGAAPLE 299 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ---RSP 324 + SIWP++E ++D V HRST+VFTNSR AE+LTAR+NE++A R P Sbjct: 300 PVPSPPRTSIWPHVEERVVDLVAEHRSTLVFTNSRRGAERLTARINEVWAERRGGDVPDP 359 Query: 325 SIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSS 384 A AA + + + + +AR+HHGS+S+ +R TE LK+G L VVATSS Sbjct: 360 GAAQPAAAPGQSGTSAGVDTRDASTIVARAHHGSMSRAERTRTESELKAGRLPAVVATSS 419 Query: 385 LELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVE 444 LELGIDMGA+DLV+QV P SVASGLQR+GRAGHQVG VS+G+ FP R +LV +AV + Sbjct: 420 LELGIDMGALDLVVQVGAPPSVASGLQRVGRAGHQVGAVSRGVVFPTYRGELVAAAVTAQ 479 Query: 445 CMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATL 504 M G LE L P PLDVLAQQ VA AA+D VD+ VRRAAP+ L A L Sbjct: 480 RMRTGELEALAVPTTPLDVLAQQLVAMAAVDDWPVDDLARVVRRAAPFATLGDATLHAVL 539 Query: 505 DMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE--- 561 DML+GRYPS DF+ RP++VW+R +++ RPGA LAVTSGGTIPDRG++ V L Sbjct: 540 DMLAGRYPSEDFAELRPRVVWDRVADVVSGRPGALRLAVTSGGTIPDRGLFGVFLAGDAG 599 Query: 562 -----------GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 G G +RVGELDEEMVYESRV D TLG+++WRI+ IT D+V+VTPA Sbjct: 600 TSDVPADAERTGGRVRGGKRVGELDEEMVYESRVGDTFTLGSSTWRIEDITPDRVLVTPA 659 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAF--FSGTIPPWLAEENTIAN 664 PG RLPFW+G+ GRPAELG +G ++ LA + N Sbjct: 660 PGVPGRLPFWKGDAPGRPAELGRALGAWVRELAALPDDGARERAEQAGLDPWAADN 715 >UniRef50_Q1YKM0 ATP-dependent helicase n=2 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YKM0_MOBAS Length = 862 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 231/903 (25%), Positives = 358/903 (39%), Gaps = 82/903 (9%) Query: 1 MADNPDPS--SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 M PDP P +WF R P Q A AL+IAPTG+GKT Sbjct: 1 MTVRPDPFLPGSAPFPLPAPFLEWFARNGWSPRPHQLDLLARAESGASALLIAPTGAGKT 60 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 LA FL +L L R G + + LYISP+KAL TD+ RNL+ P+ I Sbjct: 61 LAGFLPSLVDLHRRGRP--KPGTRPYGIHTLYISPLKALATDIARNLEKPVAEIG----- 113 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVI 177 + + + RTGDT R + PPDIL+TTPE L L++ + AR + VI Sbjct: 114 -----LKVTLETRTGDTSQVRRQRQKLKPPDILLTTPEQLALLIAGKDARGFFSDLRYVI 168 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 DE+H++ SKRG L+L L RL +L Q IGLSATV D+ +L P V Sbjct: 169 FDELHSLVTSKRGHLLSLGLARL-RMLRPDIQTIGLSATVSEPDDLRRWLVSQAPGGDVA 227 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGED---------SHAGREGSIWPYIETGILDE 288 A + V P A+ + G +G Y I + Sbjct: 228 EIADADGVLPDVAPDADPRLSELITVAGGAKPEITILKSSERVPWQGHTSRYAMPEIYEA 287 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSD 348 + H++T++F N+R AE L L + L Sbjct: 288 IQAHKTTLLFVNTRFQAEMLFQELWRINDETLP--------------------------- 320 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVAS 408 HHGS+ QR E A+ + +LR VVATS+L+LGID G VDLV+ V P + Sbjct: 321 ---IALHHGSLDVGQRRKVEAAMAANQLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASR 377 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 QRIGR+ H++ SK + P R ++++ ++ + G + LDVLAQ Sbjct: 378 LAQRIGRSNHRMDEPSKAILVPANRFEVLECQAALDANYLGAQDTPAMRDGALDVLAQHV 437 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 + A + + D+ Y+ V AAP+ L R FD +D ++ + K+V + Sbjct: 438 LGMAVAEPFRADDLYAEVTTAAPYASLDRETFDRVIDFVATGGYALRVYERYAKIVLTED 497 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKA----GSRRVGELDEEMVYESRV 584 + P + GTI D V L K+ G +G+++E V Sbjct: 498 GTWRVSHPRIAQQYRMNAGTILDAPSLQVRLIRRRTKSAIARGGPILGKIEEGFVEALAP 557 Query: 585 NDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD 644 D + R + I +Q +VT A +++P + G L + L A Sbjct: 558 GDTFSFSGQVLRFETIHENQCLVTKAVSEDSKIPTYAGGKFPLTIFLAAQVRAMLADPAR 617 Query: 645 GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSP 704 + WLA + ++PG L++E + ++ + Sbjct: 618 WGELPEQVSDWLAI--------------QQRKSLIPGPDELLIETF-PNGKRFFLVAYPF 662 Query: 705 YGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVAR----IPDTDGKLPDAAIFLFEPE 760 GR H+ + + R+ VA+D I + + LF+ + Sbjct: 663 EGRLAHQTLGMLLTRRLERARAKPLGFVATDYAISIWGRGDMGAMIADGRLSLDALFDED 722 Query: 761 KLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-P 819 L + + S L FR+CA + L+ R PG Q + A + ++ + + P Sbjct: 723 MLGDDLEAWMADSWLLKRTFRQCAVISGLIEKRHPGQEKTGRQVTVSADLVYDVLRAHEP 782 Query: 820 DFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFM 879 D ++ T + + D+ + L+ R+ I SP A ++ E + Sbjct: 783 DHILMRATWADAATGLLDVSRVSDLLGRIKH---HIVHKDLDRVSPLAVPIMLQIGRESV 839 Query: 880 YQS 882 Sbjct: 840 MGE 842 >UniRef50_C7DIA3 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA3_9EURY Length = 920 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 202/856 (23%), Positives = 348/856 (40%), Gaps = 101/856 (11%) Query: 19 TRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 D FL+ + T +Q V + L+IAPTGSGKT AA L LD + Sbjct: 4 VYDIFLKKYGSYTQIQKDAIPVIRSGNNCLLIAPTGSGKTEAAVLPVLDSIIE------- 56 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 + ++ LYI+P++AL D+ + L + V + + +R GDT + Sbjct: 57 -SREKIGIVALYITPLRALNRDMIKRLSEIC------------SRVGITISVRHGDTLRK 103 Query: 139 ERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 +RS + PP ILITTPE+L +L T + L+ V+ VIIDE+H + +KRGA L++ L Sbjct: 104 DRSVQEKAPPQILITTPETLQSILPTKKLGAALKNVKFVIIDEIHELYYNKRGAQLSVGL 163 Query: 198 ERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 ERL + QRIG+SATV ++ V+ FLGG R +V A + + + +P Sbjct: 164 ERLKDMAG-DFQRIGISATVGNSDVVSKFLGGGRKCEIVAIDARKQMHLEVYLPEKQKVK 222 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 + + G D A I V + +ST++F N+R + E L +RL L + Sbjct: 223 LKDIEEKFGLDEEAMAR-------LETIAALVKKSKSTLIFANTRQIVEALGSRLVYLNS 275 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 HH S+ K++R E KSG+++ Sbjct: 276 VYDF----------------------------GGISVHHSSLDKDERIRVENDFKSGKVK 307 Query: 378 CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLV 437 ++ATSSLELGID+G +DLV+Q +P +QR+GR+GH G VS G D + Sbjct: 308 SIIATSSLELGIDVGKIDLVVQYGSPRQALRLVQRVGRSGHSTGRVSNGAIIATNNADAL 367 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLP 496 ++ I + + +G++E +N LDVL Q A +++ Y V RA P+++L Sbjct: 368 EALSICDNVNSGKIEEFGVENNALDVLVNQLAGIALEKGECRIEAAYETVVRAYPYRNLK 427 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYS 556 F ++ +S + + G++ G ++ +PD + Sbjct: 428 METFIEAVEFMSKNH------------LLRYSEGVMRGTGGTRIYYYKHLSVLPDSKRFV 475 Query: 557 VLLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSA 615 V +R + LDE V + W++ I + + P+ A Sbjct: 476 VKSV-----VNNRILSTLDENFVINNIDEGSVFITKGLPWKVISIDEGTITIEPSTDLEA 530 Query: 616 RLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNA 675 +P W GE ++ + L F + + ++ + E + Sbjct: 531 AVPDWVGEDIPVSKQVADAFMRNLEN------FRQAENKGFMDPAAFSMLKDFVSEVSSI 584 Query: 676 TGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASD 735 I G + +E D + ++ G +E + + I G ++ +S Sbjct: 585 YEIKSGE--INIEEYDD-----YKVAYTFLGTLANEALSRLLGYLIGTEVGDSVNIKSSP 637 Query: 736 DGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTP 795 + + + + + ++ EA+ + LF +F A ++ Sbjct: 638 Y--MIFFEARKNFDLEKVLRSISSQNVYGLLAEAIRDTDLFRYKFIGIAKLFGIVEKDA- 694 Query: 796 GHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQI 855 L +Q +R + + V ET RE L + D+ L ++ G ++I Sbjct: 695 SVSKSLARQLMRI---------FRNTLVYRETEREILDNYLDVGGLINFFEQIESGALKI 745 Query: 856 SDVTTTTPSPFATSLL 871 + S ++L Sbjct: 746 KRIRLQKLSRLTNAIL 761 >UniRef50_A3CUY2 DEAD/DEAH box helicase domain protein n=5 Tax=Methanomicrobiales RepID=A3CUY2_METMJ Length = 909 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 229/951 (24%), Positives = 378/951 (39%), Gaps = 141/951 (14%) Query: 2 ADNPDPSSLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 PD+ P ++ R F +A Q Q E+ +++APTG+GKT + Sbjct: 7 PRPRSAPQTTPDLLDPRVQEVVRKRGFTGFSAAQEQAIPRLLAGENLVLVAPTGTGKTES 66 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A L DRL + G + LYI+P+++L D+ ++ + + Sbjct: 67 AMLPVFDRLLKTTGS---------GFKALYITPLRSLNRDILNRMEWWCREL-------- 109 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIID 179 L VG+R GDTP ER K NPPD+LITTPESL + + R RE L+ V+ V++D Sbjct: 110 ----GLSVGVRHGDTPQNERRKQALNPPDLLITTPESLQALFMGKRLREHLKNVKYVVVD 165 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 E+H +A SKRGA LA++LERL A QRIGLSATV + D+ FL G RP ++V P Sbjct: 166 EIHELADSKRGAQLAVALERLAAYAG-EFQRIGLSATVGNPDDIGRFLAGHRPFSLVEVP 224 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 I ++ + + + ST+VF Sbjct: 225 VASSLDIGVLFAGEDFGAQARAVGKCLDSP-----------------------GSTLVFV 261 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE L RL HHGS+ Sbjct: 262 NTRVTAEALGHRL----------------------------------YSRGDVEVHHGSL 287 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 S++ R E+ + GE+R ++ATSS+ELGID+G ++ V+Q +P V+ +QR+GRAGH+ Sbjct: 288 SRDVRVDAEERFRKGEVRTLIATSSMELGIDIGHIEHVVQFGSPRQVSRLVQRVGRAGHR 347 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQ 478 + +S+G DL++S VI A E + PP DVLA Q A A ++ Sbjct: 348 LDAISRGTVLATGFDDLLESLVIARRAKANECERIVPPAGAADVLANQVAAIAVEYGEIE 407 Query: 479 VDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA 538 V + R+ + + D ++ + + + A Sbjct: 408 VSRVREMIERSNVFDGCGP-LLDDVCRQMAEHR------------LIRLDGTRIIRTGRA 454 Query: 539 QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRI 597 + + + I D + + R VG LDE V + WR+ Sbjct: 455 RRYLIENLSMIHDEKKMEIF-----DMVSRRTVGTLDESFVLGWMHTGAVFITKGQLWRV 509 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLA 657 +I ++ V PA +P W GE P + +G A G + Sbjct: 510 LEIEGTRITVEPATRAKGEVPSWEGEQIPVPFAVAREVGALRRTRAFGRYSDTPA----- 564 Query: 658 EENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAI 717 IA + + VP R + LE D ++ + G + +E A A+ Sbjct: 565 ---AIAYAERFMGRMDEGNYPVPTDRLVTLEN-----ADEGVVCNVCGGHKANEALARAL 616 Query: 718 AGRIHALWGADASVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIVREAVGSSALF 776 + + A +G + + R+PD L + EP+ L I++ A+ +ALF Sbjct: 617 SVLLSARYGTSVGIEVGAYRFLLRLPDNVRALEVQETLAALEPDHLPGILKLALKRTALF 676 Query: 777 AARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVY 836 + + A + + +R +L+++ + + E RE Sbjct: 677 KWKLVQVAKKFGAIDADAD-------YERFSIHRLIDL---FDGTVIAAEAYRELFSISM 726 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSL 896 D+ A + ++ ++ G I ++ T SP + +L P +A + +L Sbjct: 727 DMDAAQEILAAVHDGRIAVA---TGRLSPLGSDVLSSSRDMI-----PPPMVDQAVIGTL 778 Query: 897 DSELLRN--LLGQVDPGELLDPQVIRQVEEELQ------RLAPGRRAKGEE 939 L + +L ++ + V+ +V ++ Q RL + E+ Sbjct: 779 ARRLEKEDVVLFCMNCRKWKSRTVVERVPDKPQCPLCSARLIAALKPWDED 829 >UniRef50_B1L6H5 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6H5_KORCO Length = 958 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 245/1050 (23%), Positives = 408/1050 (38%), Gaps = 122/1050 (11%) Query: 3 DNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAF 62 ++ D L P A RD + + T +Q + R ++ L+IAPTGSGKT AA Sbjct: 2 NSEDIFKLFPKCLISAIRD---KGITELTEIQRKGIPYVMRGDNVLLIAPTGSGKTEAAI 58 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 + ++ E ++ +LYI+P++AL D++ + + Sbjct: 59 WPIISKILAEN--------EKMGFLLLYITPLRALNRDLEDRI------------IFWAS 98 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEV 181 + L VG+R GDT ER + + +PP+I+ITTPE+L +ML+S + L V+ V+IDEV Sbjct: 99 KCGLNVGVRHGDTLKSERQRQSESPPEIIITTPETLQIMLSSPKLSLHLSRVKYVVIDEV 158 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 H + KRG L+++LERL + QR+ LSA++ + +F + VV Sbjct: 159 HELLDDKRGVQLSIALERLKRITRRDFQRVMLSASLGNPHLALSFFSYSKKGEVVTSGEE 218 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R I+++ P +D+ + E R + D + RS IVFTN+ Sbjct: 219 RKMIIKVIFPKVAEEDLRLSSKLLLEPDAIARVRV--------LADAIRSSRSAIVFTNT 270 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R +AE L R++++++ HH S+S+ Sbjct: 271 RSMAEALGYRMSKIFSE-------------------------------LKIHVHHSSLSR 299 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 E R +E LK GEL V++TSS+ELGID+G +D+V+Q +P LQR+GR+GH Sbjct: 300 EARVESESLLKMGELSAVISTSSMELGIDVGHIDMVLQYGSPRQALKLLQRVGRSGHGPR 359 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVD 480 GV++GL + D ++S V+ + G+LE + P DVL V L V+ Sbjct: 360 GVARGLIVAQDSDDFLESLVLSKNALEGKLEEIRPLEKSYDVLYHTIVGMLLRERELSVN 419 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 + P++DL L +S + P++VW E R Sbjct: 420 DIVKVANGCYPYRDLSAEDCRKLLSFMSRAW---------PRVVWYDENMDSVRRASELA 470 Query: 541 --LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRI 597 + TIP+ YSV+ ++ +G+LDE V E + WR+ Sbjct: 471 FDYFFNNVSTIPETVGYSVV-----DEITGFYIGKLDEAFVLEYLFPGAKFVFRGSVWRM 525 Query: 598 QQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT------ 651 ++I + V +P W GE E+ +G + + Sbjct: 526 KRIEGGTIYVEQVFDPIGAIPSWIGEQLPVSMEVASEVGRLRGRVEEAYRRGKLDSLSHE 585 Query: 652 -IPPWL-AEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRV 709 + + E I I E +P + +V+E R +++HS YG V Sbjct: 586 IAKEYGFSTEEDIRRALSPILEHIEGGFPLPTDKRIVVEDVRGG-----VVIHSTYGNLV 640 Query: 710 HEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREA 769 + AIA + + V I+ + + + + EA Sbjct: 641 NRTLGRAIAQAMLKRFKLLVRVSEDPYRILVL--GVSSEPIVNVMKSL-VGEGEEFFLEA 697 Query: 770 VGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLR 829 + +S+ F R R L+ L ++A+ Y P E LR Sbjct: 698 IENSSFFRLRLLHTLKRMGLIKDYASSKIIS----------LNKLARAYEGTPPYEEALR 747 Query: 830 ECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAER 889 E L +D+ L+R + EI++ PSP A L G + P AE Sbjct: 748 ETLIKDFDIEGAMELLRCIEREEIEVVRSEKEGPSPLA---LLGLDRSGLPLEVIPPAEL 804 Query: 890 RASVLS-LDSELLRN--LLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLR 946 +L + +L L D + + E + P ++ + L Sbjct: 805 SRRLLENFKNRILSQQVTLVCSDCWSWFMDSDVNSLMEIGAPVCPNCGSRRIAAVTGYLV 864 Query: 947 ELGPMTVEDLAQRHTGSSEEVA----SYLENLLAVKRIFPAMISGQERLACMDDAARLRD 1002 VE+ Q+ S Y LL+ + PA+++ R D RL Sbjct: 865 SEAKRYVEESRQKGKPSVGNWELADRCYEFGLLSERYGLPAIVAMAARAVDPIDIERLLS 924 Query: 1003 ALGVRLPESLPEIYLHRVSYPLRDLFLRYL 1032 + + E + ++ + R + Sbjct: 925 EVDE-----VNERFFEALARIETEAVKRRM 949 >UniRef50_A1RT46 DEAD/DEAH box helicase domain protein n=5 Tax=Thermoproteaceae RepID=A1RT46_PYRIL Length = 916 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 250/964 (25%), Positives = 385/964 (39%), Gaps = 130/964 (13%) Query: 14 VFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P + + PT +Q + H L+IAPTG GKT AA + ++ Sbjct: 5 LLHPKLQKAIKELGYLTPTPIQTEGIPRILSGSHVLLIAPTGFGKTEAALFPIISKMIET 64 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 R +YI+P+++L D+ R L + L + IR Sbjct: 65 SNVS--------GIRCIYITPLRSLNRDLLRRLYALADAV------------GLSIAIRH 104 Query: 133 GDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGA 191 GDT +ER + PPDILITTPESL L+L + RE LR V VI+DE+H + SKRG Sbjct: 105 GDTTQKERKAIAVRPPDILITTPESLQILLLHRKLREHLRNVRFVIVDEIHELINSKRGV 164 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVV 250 LA+ LERL L QR+GLSATV + VA FLGG R V +V+ + +I V+ Sbjct: 165 QLAIGLERLVELAG-EFQRVGLSATVGAPQLVADFLGGVGRKVEIVDVSGEKRLEIDTVL 223 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ + +D R I Y+ + ++FTN+R AE L + Sbjct: 224 PMPSEEDHIDAEKFDVTPETLARIRKIAEYLR-------SSKGAVLIFTNTRDGAEFLAS 276 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 +L + HH S+S+E R E+ Sbjct: 277 KLRSILGDS--------------------------------VEVHHSSLSREHRISVEER 304 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK G L+ VVATSSLELGID+G +DLVIQ +P V+ +QR+GR+GH + +S+G+ Sbjct: 305 LKKGRLKAVVATSSLELGIDVGHIDLVIQYGSPRQVSKLVQRVGRSGHGLDKISRGIIVA 364 Query: 431 RTRRDLVDSAVIVECMFAGRL-ENLTPPHNPLDVLAQQTVAAAAM-----DALQVDEWYS 484 DL+++ VIVE GRL E + N LD+L Q V A + +D Sbjct: 365 SDFEDLLEAEVIVERALKGRLEEEVEYHENALDILLHQIVGIALEAKVDGKEINLDYILK 424 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 VRRA P+++L LD A R KL+ L R + Sbjct: 425 VVRRAHPYRNLTEEDIRLVLDF-----------AERHKLLRG-----LKPRRHSIRYYFE 468 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 + TIPD Y L ++ R VGELD E VY I L W + D Sbjct: 469 NVSTIPDEKSYKAL-----DETTGRIVGELDSEFVYSIEPGTKIVLSGRVWVFSRKENDA 523 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 V + P LP W GE P E+ + + + A + + Sbjct: 524 VYLYPDFDVKGALPAWLGEQIPVPYEVAQEVCIRRAEVLQKALAGEN--ELGLDLEGLEA 581 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 +VP L + +G+ ++HS G + +E + ++ + Sbjct: 582 ------------ELVPTPERLHI----HVLGNKYAVIHSCLGTKGNEALGLYLSHALSGY 625 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 G + ++ D +F E + + +R A+ +S +F RF + A Sbjct: 626 VG-PVGYRSDAYRVLLIFRDYVPINAIEEVFRKPQEFVYRTLRNAIKNSKIFRYRFLQVA 684 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 R ++ P ++ + Y D LETL E + D+ A+ L Sbjct: 685 RRVGIVSKDA--QEIPT-----------KLIEIYLDDLPGLETLNEMFVERVDVKAMISL 731 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVA-EFMYQSDAPLAERRASVLSLDSELLRN 903 + +L+ G I I P+ +L + +F ++ + R + + +L Sbjct: 732 IEKLSNGRIPIVVRKLQRPTLLEKPILEEALRLDFSFRGLS----RESLADIVRRRILNK 787 Query: 904 --LLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHT 961 L ++ G L + + +++ G RA DL + + L QR + Sbjct: 788 YVTLLCLNCGWTLMTRA-AALPDDIHCQKCGVRALAVIKGVDLEKARNILNKFRLKQRLS 846 Query: 962 GSSE 965 Sbjct: 847 VDER 850 >UniRef50_O29116 Large helicase-related protein (Lhr-1) n=2 Tax=Archaeoglobaceae RepID=O29116_ARCFU Length = 892 Score = 598 bits (1541), Expect = e-169, Method: Composition-based stats. Identities = 229/997 (22%), Positives = 402/997 (40%), Gaps = 132/997 (13%) Query: 15 FSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 + R+ ++ T +Q + + + L+IAPTGSGKT AA + + + + Sbjct: 2 LNQRLREALSAAGIEELTELQLEAFRKILSGKDVLIIAPTGSGKTEAAIIPIFEAMLK-- 59 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 K + +YI+P++AL D+ R ++ + + +RV +R G Sbjct: 60 ------MEKPEGIVAIYITPLRALNRDMLRRIRGIAE------------FLGIRVDVRHG 101 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAH 192 DTP +R++ +R PP +LITTPE+ ++ + R+ L+ V V++DE+H + S+RG Sbjct: 102 DTPDSQRARQSRKPPHLLITTPETFQILFLGKNLRKALKNVRYVVVDEIHELIDSERGVQ 161 Query: 193 LALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 L+++LERL + Q IGLSATV V+ F+G D V A + +I +V P Sbjct: 162 LSVALERLREMA--RFQTIGLSATVSRPKLVSRFVGADAEVLEWK--AEKEYEIEVVKPE 217 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 + + + I D V H S ++F N+R AE L +L Sbjct: 218 VDEKLAAKLGVDAEIAGELKF-----------IADAVKEHGSALIFVNTRQTAEALGIKL 266 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 +L HHGS+S+E R E+ Sbjct: 267 KKLID----------------------------------VEVHHGSLSRETRVEAEERFA 292 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 GEL ++ TSS+ELGID+G V+LV+Q +P +QR+GR+GH +G VSKG + Sbjct: 293 KGELDALICTSSMELGIDIGHVNLVVQYNSPRQAVRLVQRVGRSGHGLGRVSKGYVVASS 352 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAP 491 D+++SAVIV G LE+ DVLA Q A A + ++ + V+RA P Sbjct: 353 FDDILESAVIVRRAKEGLLEDAEIHFKSFDVLANQICALALEYGRIDAEKAHRIVKRAFP 412 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 +++L FD + L+ K+ ++ G + AR + + IPD Sbjct: 413 YRNLTFEEFDEVCNFLAR----------IGKIFYDE--GEIGARRNTRRYFYENISMIPD 460 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAP 611 Y V+ + + + +G LDE + +I + WR+ + + V V P Sbjct: 461 EKHYRVV-----DVSSGKTIGSLDESFLSTFS-GEIFAMKGELWRVLSVD-EVVRVEPVS 513 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLA--DGAFFSGTIPPWLAEENTIANIQGLI 669 +P W GE P E+ + +G + LA A L + ++ + + Sbjct: 514 AE-GEIPSWVGEEIPVPFEVAQEVGMLRNWLAGLIKAKGEKAALKALGAKGDVSVVVKTL 572 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 EQ VP H+ +E + +++++ +G +V+E +A + A G+ Sbjct: 573 REQIEKGFAVPYDSHITIE-----GSENVVVVNACFGHKVNETLGRILALLLTARRGSSV 627 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 +V I ++ + ++ + +PE + + AV + L + A + Sbjct: 628 AVEIDPYRI--KLSPAKPEEVESILKSIQPEAVESLAERAVFDTRLMQWKVVNAARKFGF 685 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + R + + D P+ E LRE + D+ ++ +++ Sbjct: 686 LSKEDELSRINVR----------SLVVKLKDTPIYREALREIFVEKMDVERTAEVVEKIS 735 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD 909 GEI++S +P A A + + A RA L+ E++R + ++ Sbjct: 736 SGEIEVSVYNELSPISLAA----RQRAMDILAVKSSEAILRAFRERLEKEVVR--VYCLN 789 Query: 910 PGELLDPQVIRQVEE--------------ELQRLAPGRRAKGEEGLFDLLRELGPMTVED 955 + + E +R R + L +L+ G V Sbjct: 790 CRACYTER-VESFERFTCIKCGSKMIAVFNSRRKPEEFRERELFKLANLVMAHGKRAVYA 848 Query: 956 LAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLA 992 L+ G+ L F A+I + Sbjct: 849 LSTFGIGADTAARLLSRYYLEEDDFFKALIEAERNYI 885 >UniRef50_B9LRP7 DEAD/DEAH box helicase domain protein n=7 Tax=Halobacteriaceae RepID=B9LRP7_HALLT Length = 972 Score = 596 bits (1538), Expect = e-168, Method: Composition-based stats. Identities = 251/1023 (24%), Positives = 385/1023 (37%), Gaps = 134/1023 (13%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 + F PT Q + A ++ALV+APTG+GKT A L D + R Sbjct: 23 EQGFSTPTEPQREAIPPLADGKNALVLAPTGTGKTETAMLPVFDAIVDARDAPG--DQPR 80 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 LYI+P++AL D+ L+ + + V +R GDT ERSK Sbjct: 81 SGISALYITPLRALNRDMMDRLE------------WWGDRLGVEVAVRHGDTTRYERSKQ 128 Query: 144 TRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 +PPD+LITTPESL +LT S+ R L V V+IDEVH +A +KRGA L + LERL Sbjct: 129 ADDPPDVLITTPESLQAILTGSKMRVALEDVAHVVIDEVHELASAKRGAQLTVGLERLRR 188 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGG----------DRPVTVVNPPAMRHPQIRIVVPV 252 + QRIGLSATV + +V FL G DR +V A +R++ P Sbjct: 189 VAGP-FQRIGLSATVGTPEEVGKFLVGSGKRDPDHPGDREFEIVEVAAGTRTDVRVLDPP 247 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 D + +++ A + I + V H ST++F N+R AE L +R Sbjct: 248 ITDRDTTLAGELAVDETTASHVRT--------IREIVADHESTLIFVNTRQTAEALGSRF 299 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALK 372 L + HHGS+SK+ R E K Sbjct: 300 KTLAEREEKAGSIDDPTE---------------------IEVHHGSLSKDVRIDVEDRFK 338 Query: 373 SGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRT 432 SGEL +V TSS+ELGID+G VD V+Q +P VA LQR+GRAGH+ VS+G + Sbjct: 339 SGELDGLVCTSSMELGIDVGRVDHVVQYGSPREVARLLQRVGRAGHRRDLVSEGTVVTQG 398 Query: 433 RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVDEWYSRVRRAAP 491 D +++ I A +E H LD +A Q V + E Y V A P Sbjct: 399 GDDTLEALAIARRAGAELVEPAAIHHGSLDTVANQIVGVVMDEGDVHAREAYQIVTSAYP 458 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 ++DL F + L G + L + + L G + IPD Sbjct: 459 FRDLAEETFQEIVRELDGNH----------LLWLDEASDTLEKSGGTWQYFYANLSMIPD 508 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQIT--RDQVIVT 608 Y V + + R +G LDE V + + WRI ++ ++V VT Sbjct: 509 ESTYEVY-----DMSSRRGIGTLDERFVVNFAGPGETFIQRGEMWRITEVDEEEERVNVT 563 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL--------ADGAFFSGTIPPWLAEEN 660 P + +P W G P + E +G A + A+E Sbjct: 564 PIADPAGEVPSWIGREIPVPKPVAEEVGRIRGEAAEALAAGSTPEAVAGDLAERYPADER 623 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 TIA + + +A VP R +V+E + +++ +G V+E A +A Sbjct: 624 TIATALKPVVDHVDADHPVPTDRRIVIE-----GSARTVAVNAAFGHEVNETLARLLAAL 678 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLP-DAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + G+ + I +P G + +P++L + A+ +S Sbjct: 679 VGQRAGSSIGMDVDPYRIEFEVPHGVGPGTFREVLETTDPDRLEAYLELALKNSDALKFT 738 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 + AA+ + G R +LL PV E LRE + Sbjct: 739 LAQVAAKFGSIKRYREGR------GRFGGDRLLAAL---EGTPVYDEALREVFHADLAVG 789 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 L+ + G I ++ TP A EF+ P + ++ Sbjct: 790 ETAELLEDVQDGSIDLAIARERTPLGIAG---RSSGTEFL----VPENADADVIETIRER 842 Query: 900 LLRN--LLGQVDPGELLDPQVIRQVEEELQRLAPG------RRAKGEEGL---------- 941 + + +L + + +R+V ++ + G EE + Sbjct: 843 IRNDRVILFCLHCADWKRTTKVRRVPDQPKCPDCGSTRVATLNPWDEETVTAVRATEKDE 902 Query: 942 ------------FDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQE 989 L++ G V LA R G + + ++ + Sbjct: 903 EQERRTKRAHRAASLVQTHGKRAVIALAARGVGPHNAARIINKLREDEDEFYRDVLRQER 962 Query: 990 RLA 992 A Sbjct: 963 EYA 965 >UniRef50_C5A764 ATP-dependent helicase, lhr-like protein (Lhr) n=8 Tax=Thermococcaceae RepID=C5A764_THEGJ Length = 926 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 244/1037 (23%), Positives = 398/1037 (38%), Gaps = 144/1037 (13%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 P R F + +Q ++ + + L+IAPTGSGKT AA L + + EG Sbjct: 2 HPLLRKAIRERFGRLNRLQQDSFREVSSGKSVLIIAPTGSGKTEAAVLPVFNEILEEGL- 60 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 K LYI+P+KAL D+ L+ ++ + V +R GDT Sbjct: 61 --------KPISALYIAPLKALNRDLLERLE------------WWGRKLGITVEVRHGDT 100 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 A ++K T+NPP +LI TPE+L ++LT R+ L V+ VI+DE+ + +KRG+ L Sbjct: 101 SAHRKAKQTKNPPQMLIITPETLGVILTVKSLRKHLENVKFVIVDEIAELVDNKRGSQLL 160 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L+LERL + +RIG++ATV + +V +L + T+V P + + ++ P Sbjct: 161 LNLERLAEI--ADFKRIGMTATVGNEEEVRDWLKAE---TIVKPNWKKSYRFHVLYPKPK 215 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 +D + A R +W + V +H ++FTN+R AE L RL Sbjct: 216 EEDKELAEKLSVSPEIASRLRVLW--------EIVEKHGKALIFTNTRQFAEVLAHRLK- 266 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + HHGS+SKE R E+ALK G Sbjct: 267 --------------------------------AWGKPVEVHHGSLSKEARVRAEKALKEG 294 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 +++ ++ TSS+ELGID+G VD+VIQ +P V +QR+GRA H++G VS+G Sbjct: 295 KIKALICTSSMELGIDIGDVDVVIQYMSPRQVNRLVQRVGRAKHRIGEVSEGYIIATNVE 354 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWK 493 D + S VI + GR E + P LDVLA V L + Y +RA ++ Sbjct: 355 DYLQSLVIAKRALEGRFEAV-EPIGGLDVLAHFVVGLLIEYKRLPRERPYEIAKRAYVYR 413 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 DL + L +L G ++ E+ +L R GA + TIPD Sbjct: 414 DLSWSDYLDVLRVLEDARLVG----------YDEESNLLYLRRGAFQYYYENLSTIPDEV 463 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 + V + +G LDE V + + SW + +I + ++ R Sbjct: 464 SWRVF-----DAKSGHVIGRLDESFVMDLEEGMEFVMNGRSWIVLKIDDEARLLKVRESR 518 Query: 614 --SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEE 671 + +P W GE P + +G L F+ + E + ++ EE Sbjct: 519 SLESAIPSWEGEMIPVPFGVAFDVGRLRRELVFD--FNKALDLLEGVEFSEEELRRAFEE 576 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 R+ P R +V+E +++H+ +G R +E + + +G SV Sbjct: 577 IRD--EPFPTDRDIVVESTP-----KALVIHADFGSRANEAIGRIVHSLLILRYGRVFSV 629 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 + IV + P EP ++ IV A+ S + R A R + Sbjct: 630 RSQGHAIVFKTPFQLNPEEVKRYLYQEPGRVELIVSRALRDSHAYRWRMLNVAKRFGALR 689 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGG 851 +++ ++ + + + ETL E D D+ E +M L G Sbjct: 690 RD---------------ARIRKVERLFEGTVIERETLNELYHDKVDVKKAELVMELLKAG 734 Query: 852 EIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN--LLGQVD 909 +++ V PS A L EF+ + ER + LL + +L + Sbjct: 735 SLRVKTVLRKEPSTLAR-LNMTVSGEFLLSG---VLERDELIELFKKRLLEHEVVLVCTN 790 Query: 910 PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVAS 969 G +V LQ + + + + + Sbjct: 791 CGWHSKTKV-----ARLQNIKLRQCPRCGSKM-----------------LAVAHPIDAEE 828 Query: 970 YLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFL 1029 +L L V+ P + + AA L D G +L + Sbjct: 829 FLSVLEKVRHGKPLERKEERIYRKILKAADLVDTYGFEAVLALASYGTGPDTAA-----R 883 Query: 1030 RYLRAHALVTAEQLAHE 1046 + L Sbjct: 884 LLAQYRGDALILALMER 900 >UniRef50_Q6MCM6 Putative uncharacterized protein n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCM6_PARUW Length = 804 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 208/881 (23%), Positives = 365/881 (41%), Gaps = 90/881 (10%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 WF +P Q + W + L+ PTG+GKT AA+L AL +L + Sbjct: 6 HSLIEQWFNFKKWEPLPFQKEAWLKFLEGKSGLISVPTGAGKTYAAYLSALSKLHED--- 62 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 +K +ILYI+P++AL D++ L+ P+ + ++ RV RTGDT Sbjct: 63 ------PKKGIQILYITPLRALAKDLESALKAPIDDL----------KLIYRVERRTGDT 106 Query: 136 PAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 ++ K ++PP+ILITTPESL +ML A ++++I+DE H + SKRG Sbjct: 107 SYIKKEKQNKHPPEILITTPESLAVMLCNGHATSQFSYLQSIIVDEWHELLASKRGVLFE 166 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAF-LGGDRPVTVVNPPAMRHPQIRIVVPVA 253 L L RL A S Q GL+AT+ + A +G DR +VN R + V+P + Sbjct: 167 LCLSRLKA-WKPSVQIWGLTATIGNIQQAAQVCVGVDRSPIIVNAKMEREVILTAVLPES 225 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 G + + +L+ + ++ST++FTN+R E+ + Sbjct: 226 L--------------DKLPWTGRLGLRLLPYVLNRLNFNQSTLIFTNTRSQTERWYQAIL 271 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 E + + HH ++ K+ R E+ +K Sbjct: 272 EA-----------------------------RPEWKNLIAIHHSAIDKKTREGIEEGIKF 302 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G +R VV TSSL+LGID+ V+ VIQ+ +P SVA LQR GR+ H+ P Sbjct: 303 GSIRFVVCTSSLDLGIDLPRVEKVIQIGSPKSVARLLQRAGRSSHRPLTPCYIEVVPTHA 362 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 +L++ + +E+ P N DVL Q + A + Q DE +S+++ A ++ Sbjct: 363 LELIEIQAYRLAIKEHHIESRLPLKNCYDVLMQHMMTCAIGEGFQKDELFSQIKTTACFQ 422 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 DL + F+ L L S KLV++ + + G S GTI Sbjct: 423 DLSLKDFEDCLHFLISGGNSLKAYPEYKKLVYSNDK-YIVEDKGLIRRHKMSIGTISSDS 481 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 +V + + +G ++E + + D G ++ Q V A + Sbjct: 482 QITVKWTK------GKAIGMIEESFLTNLKPGDHFLFGGKQLQLVQYRDMTAYVRLAKHK 535 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 WRG A LG + + S +L + +I+ Q+ Sbjct: 536 QKHAAVWRGSHLPFSASLGVELRKVCEQ--KISLNSSDQEKFLLD--------QIIQLQQ 585 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 + +P ++ L++E + + G W + ++ G+ +H+ A+ +A R+ ++ Sbjct: 586 KFSY-LPTTKQLLIELTKSQEG-WHLFVYPFEGKIIHQGLALLVAHRLSKKASQTFTIST 643 Query: 734 SDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR 793 +D G + + LF + + + ++E + + + FR+ A A L+ Sbjct: 644 NDYGFEL-LSRKSFQEEMLTTELFSTQYMNEDIQELINTQEIGKRYFRDIARIAGLIFPG 702 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGYP-DFPVILETLRECLQDVYDLPALERLMRRLNGGE 852 P Q ++ +S L ++ Q Y + ++ + +E L ++ L+ + RL+ + Sbjct: 703 YPHKHKTNRQVQISSSLLFDVLQKYDANNLLLQQAKKEVLDIQFEKIQLKNCLTRLSQAQ 762 Query: 853 IQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 + I SPF L V + + L ER + Sbjct: 763 LMIK--KLKKFSPFGLELFVERVNDTLSTES--LTERIKQI 799 >UniRef50_Q1QRK7 DEAD/DEAH box helicase-like n=6 Tax=Alphaproteobacteria RepID=Q1QRK7_NITHX Length = 853 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 234/905 (25%), Positives = 367/905 (40%), Gaps = 97/905 (10%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 +AD + LPD F WF P A Q A AL+IAPTG+GKTLA Sbjct: 3 IADREEEQPALPDDFL----RWFAARRWSPRAHQLALLQKARAGRSALLIAPTGAGKTLA 58 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 FL L L E + + LYISP+KAL D+ RNL+ P+ + Sbjct: 59 GFLPTLVELSCFPSPTGAEGSETRGLHTLYISPLKALAVDIARNLEAPIAEMT------- 111 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET-LRGVETVIID 179 + ++V RTGDTP R + R PPDIL+TTPE + L+L S ++ V++D Sbjct: 112 ---LPIKVETRTGDTPMLRRQRQRRYPPDILLTTPEQMALLLASDDAPFLFSSLQRVVLD 168 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 E+HA+ SKRG L+L+L +L L + IGLSATV +A FL Sbjct: 169 ELHALVTSKRGDLLSLALAQLWRLA-PRMRTIGLSATVAEPESLARFL-----------V 216 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +I V + + G + I D + R+R+T+VF Sbjct: 217 PQPEGKIVSADIVVAGGAAAPIVEMLDTRERLPWAGHSARHALGEIYDLIRRNRTTLVFV 276 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE L L + + HHGS+ Sbjct: 277 NTRSQAEMLFQDLWR------------------------VNDDGLA------IALHHGSL 306 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 QR EQA+ G LR VV TSSL+LG+D G VDLVI + P + +QRIGRA H+ Sbjct: 307 DVAQRRKVEQAMTEGRLRGVVCTSSLDLGVDWGDVDLVINIGAPKGASRLMQRIGRANHR 366 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 + S+ + P R ++++ V ++ + + LDVLAQ + A Sbjct: 367 LDEASRAVLVPANRFEVLECRVAIDAVNENAQDTPPLRTGALDVLAQHVLGCACGAPFHA 426 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR----ETGILTAR 535 D+ Y VR AAP+ L R FD +D ++ + ++ ++ E+ A Sbjct: 427 DQLYDEVRTAAPYAALTRADFDDVIDFVATGGYALKSYERFARIRQDKANSSESRWRVAN 486 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPE-------------GEEKAGSRRVGELDEEMVYES 582 P + + GTI + M V L G G R +GE++E + Sbjct: 487 PKVRQSYRLNVGTIVEEAMLKVKLVRSRHGGQNRGKGSTGTIARGGRMLGEIEEYFIEGL 546 Query: 583 RVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLL 642 V D G R + + DQV V+ A S ++P + G L E + + L Sbjct: 547 VVGDTFVFGGEIVRYEVLVEDQVYVSRANDDSPKVPSYMGGKFPLSTYLAERVRNLLDDK 606 Query: 643 ADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILH 702 + + WL+ ++ VP +R +V+E G ++ + Sbjct: 607 RAWSSLPDQVRQWLSL--------------QSHFSRVPHAREMVVETF-PRAGKHYLVCY 651 Query: 703 SPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGI-VARIPDTDGKLPDAAI---FLFE 758 GR H+ + + R+ + VA++ + V + DT + + LF+ Sbjct: 652 PFEGRLAHQTLGMLLTRRLERMRVRPLGFVANEYALAVWMLGDTSSMIGQGRLNLDALFD 711 Query: 759 PEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY 818 P+ L + + SAL FR CA + L+ R+ Q + ++ + + Sbjct: 712 PDMLGDDLEAWLAESALMKRTFRSCAIISGLIARRSTSDEKTRRQVLFSTDLVYDVLRKH 771 Query: 819 -PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAE 877 PD ++ + + D+ L ++ R+ G +I+ SP A ++ E Sbjct: 772 QPDHLLLRAARTDAAAGLLDIRRLSDMLARIRG---RITHKPLDRISPLAVPVMLEIGRE 828 Query: 878 FMYQS 882 +Y Sbjct: 829 AIYGE 833 >UniRef50_Q3JLU0 ATP-dependent helicase, DEAD/DEAH family n=75 Tax=cellular organisms RepID=Q3JLU0_BURP1 Length = 1700 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 213/937 (22%), Positives = 329/937 (35%), Gaps = 139/937 (14%) Query: 624 GNGRPAELGEMIGDFLHLLAD-GAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGS 682 P E + + + I + R A G +P Sbjct: 789 AMPVPPE-----AELRAEPRRLAPALAWLTGELGLDAEAARQIADYLARARAALGALPTQ 843 Query: 683 RHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARI 742 LV+ER DE G ++++HSPYG R++ W +A+ R + + A+DD ++ + Sbjct: 844 DTLVMERFFDESGGMQLVIHSPYGSRINRAWGLALRKRFCRSFNFELQAAATDDALILSL 903 Query: 743 PDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLW 802 D ++ +A+ + LFAAR+R A +L +P G + Sbjct: 904 SHAHSFALDEVWRYLRASSAEHVLIQALLDAPLFAARWRWNATTSLALPRFAGGRKVAPQ 963 Query: 803 QQRLRASQLLEIA--------------QGYPDFPVILETLRECLQDVYDLPALERLMRRL 848 QR+++ LL + P P++ +TL +CL D D L+RR+ Sbjct: 964 LQRMKSEDLLATVFPDQVACAENIVGEREVPKHPLVDQTLDDCLHDAMDTEGWLALLRRI 1023 Query: 849 NGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQV 908 G++ + PSP A +L F+ DAPL ERR + Sbjct: 1024 EAGDVALVARDLPAPSPLAAEILNAKPYAFL--DDAPLEERRTQAVLARRWSDPE---SA 1078 Query: 909 DPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVA 968 D LD I V +E L + + + D L L + +++A A Sbjct: 1079 DDLGALDAGAIEAVRDEAWPL-----VREPDEMHDALVGLACIADDEIASHDGWR----A 1129 Query: 969 SYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEI------YLHRVSY 1022 + + A+ G+ + A +R G + P Sbjct: 1130 CVAQLAAGGRAARLALAGGRGLWIAAERVACMRALYGADVALDPPLAPPPGFDAPWEPEA 1189 Query: 1023 PLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQ------QDIWV 1076 L D+ L +TA LA +L A V L L +G VM + D W Sbjct: 1190 ALVDVIRARLTGFGPLTAAALAAPLALPAASVAIALAALEREGYVMRGRFTPGARDDEWC 1249 Query: 1077 SDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGV 1136 + R+ +++ R PV + R L Q V P T G G Sbjct: 1250 ERHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTRGL-------------GG 1296 Query: 1137 DGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDD-- 1194 D + V+ QL G AS WE +ILPAR+ DY + LDE G + W+ + Sbjct: 1297 DALAAVVHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAKAASA 1356 Query: 1195 -----GLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKI 1249 +V L +E A A Q SA + + A LA GA F +++ R Sbjct: 1357 PVKTTPVVLLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHAR--- 1413 Query: 1250 GESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQP 1309 + L+ AL LV G++ +D +A LRAL R + A+ +R RARRG + Sbjct: 1414 ---LLPVELERALGELVAAGLVNADSFAGLRALLRPA--AQRGAQRPSRARRGGALIGGM 1468 Query: 1310 VSPRVSY-----------------------------------NTPNLAGRWSLLQV---- 1330 P A R + + Sbjct: 1469 DDAGRWALVQRLPLAPLDFGEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREGGAEA 1528 Query: 1331 ----------EPLNDTERM------LALAENMLDRYGIISRQAVIAE-NIPGGFPSMQTL 1373 P +A +L RYG+ + + E + + + Sbjct: 1529 DARIARAMRAAPPQAGRHAIAPAALEHVARTLLRRYGVAFWRLLACEAEWMPSWRELLPV 1588 Query: 1374 CRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVW 1433 R +E G I GRFV GL G QFA I LR+L + + + +S DP N+ Sbjct: 1589 YRRLEARGEIRGGRFVAGLAGEQFALPDAIPILRELRRRPAEG---LMLCVSGADPLNLT 1645 Query: 1434 GNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQG 1470 G LLP PA AG ++ G + L G Sbjct: 1646 GTLLPGERVPAL------AGNRILFRDGVPIASLVGG 1676 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 244/649 (37%), Positives = 329/649 (50%), Gaps = 59/649 (9%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A P++ D F P WF F PT Q W LV APTGSGKTL A Sbjct: 105 ATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTLTA 164 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL ALD L R+ + + ++Y+SP+KAL D+ NL+ PL GIA E RRG Sbjct: 165 FLSALDDLVRDA--LAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL 222 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDE 180 +R +RTGDT ER ++ P IL+TTPESLY++L+S R L TVI+DE Sbjct: 223 PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE 282 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP-----VTV 235 +HA+A +KRG+HLALSLERLDAL+ RIGLSAT + VA FL G R + Sbjct: 283 IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI 342 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 V+ R + + +P + V +W + I + HR+T Sbjct: 343 VDTGHTRTRDLALELPPMPLGPV--------------MANDVWERLYDRIAELAAAHRTT 388 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 +VF N+R +AE+ L + A +H Sbjct: 389 LVFVNTRRMAERAARHLADRLGADA-------------------------------IAAH 417 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 HGS++KE R EQ LK G+L+ +VAT+SLELGID+G V+LV Q+ +P +A LQR+GR Sbjct: 418 HGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQLGSPRGIAPFLQRVGR 477 Query: 416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMD 475 +GH +GGV KG FP +R +LV+ A +++C+ G L+ L P PLDVLAQQ VA A Sbjct: 478 SGHHIGGVPKGRLFPLSRDELVECAALLDCVRRGELDVLRIPRAPLDVLAQQLVAEVACR 537 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 Y V +AAP+ L R FD L ML+ + S + L + + R Sbjct: 538 EWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGAR-AAYLHRDVVAHTVRGR 596 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSW 595 GA+L AVTSGGTIPD Y+VLL +G ++E+ ES D+ LG S+ Sbjct: 597 RGARLAAVTSGGTIPDNADYAVLLEPQ-----GVNIGTVNEDFAVESLAGDVFQLGNQSY 651 Query: 596 RIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLAD 644 RI +I +V V A G++ +PFW GE R EL + L Sbjct: 652 RIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLDA 700 >UniRef50_A8M9R8 DEAD/DEAH box helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M9R8_CALMQ Length = 926 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 252/986 (25%), Positives = 410/986 (41%), Gaps = 131/986 (13%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 ++ P ++ +++PT VQ + EH L+ +PTG+GKT AA L L + Sbjct: 7 ELLHPKVKEAVKELGYEKPTKVQELAIPIVLTGEHTLISSPTGTGKTEAALLPVLSMMLN 66 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 G R+ RILYI+P K+L D+++ ++ + + L + +R Sbjct: 67 SGV--------REGIRILYITPAKSLNRDLEQRIRRL------------SSLLGLTIAVR 106 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHAVAGSKRG 190 GDT + ERS+ RNPP ILITTPE+L ++L S R LRGV VIIDEVH + GSKRG Sbjct: 107 HGDTTSSERSRQRRNPPQILITTPETLQILLVSPVMRNWLRGVGWVIIDEVHELLGSKRG 166 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 LA+ LERL L QRI LSAT+ ++A+ L G V Sbjct: 167 VQLAVGLERLVELAG-EFQRIALSATIGDL-ELASSLVGGVGRGV--------------- 209 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSRGLAEKLT 309 + +V+ V+ H R S I + V R S ++FTN+R +AE L Sbjct: 210 ---RIVNVNDVSRTMELTIHYLRPDSDIEEAARRISEVVNRYGGSVLLFTNTRDMAELLG 266 Query: 310 ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 L + + +HGS+S+E+R E+ Sbjct: 267 TELKK---------------------------------VINGVEVYHGSLSRERRETVEE 293 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF 429 L++GE++ VV+TSSLELGID+G+++ VIQ +P +QR+GR+GH+VGGV+KG F Sbjct: 294 GLRNGEVKVVVSTSSLELGIDIGSIEAVIQYMSPKQSDRLIQRVGRSGHEVGGVAKGHVF 353 Query: 430 PRTRRDLVDSAVIVECMFAGRLENLTP-PHNPLDVLAQQTVAAAAMDA--LQVDEWYSRV 486 T D ++S V+ G LE P +DVL Q + V++ Y + Sbjct: 354 TVTPDDYLESLVLARRAIEGELEGDYPYHAGAMDVLLHQLAGIILDHGGSVTVNDAYRII 413 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 +RA P+ L ++ + R + G+L R G ++ + + Sbjct: 414 KRAHPYSSLQLSDLMRLIEF-----------SSRELKLIGNYDGVLRNRRGLRIYYLQNV 462 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI 606 IPD + + +GELDE+ N +I L WR+ I +D+ + Sbjct: 463 SMIPDERRFKAV-----NYMDKSTIGELDEDFALTLEQNKVIVLAGRLWRVLTIDKDEGV 517 Query: 607 VTPAP--GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 +T LP W G+ E+ + + L G S L N Sbjct: 518 ITLDELRSGEGELPEWIGDEIPVSYEVAQEVCRLRRRLLAGGSLSSFNRIKLM------N 571 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHAL 724 I L+E+ R + + G V E E I++HS G + +E + + G + Sbjct: 572 INELLEDVRELSSDLRGKYPDVNETLI-EYSSNLIVIHSCLGTKGNEALGLYLTGYLTGR 630 Query: 725 WGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 S V ++ + P + + + + +R + +S L+ RF A Sbjct: 631 LALSISYVRDPYRVIIKTPRPINPEIIRRALQEDVDTVEETLRNVIKNSNLYRYRFIHVA 690 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 R ++P T + +L ++ Y + + E + E D DL AL R Sbjct: 691 RRMGVLPKGTID---------VNVDRLTKV---YNESVLDNEVINEIEVDKLDLDALRRF 738 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 + + G I+++ + PS A ++ G + + P R + S+ ++ Sbjct: 739 INGIKDGVIKLNFL-ARKPSKLALMVMGGLGTRSIITDEVP---RNIIIDSVKKRIMNKE 794 Query: 905 --LGQVDPGELLDPQVIRQVEEELQRLAPGRR----AKGEEGLFDLLRELGPMTVEDLAQ 958 L + G L +V + EL+ G + K + D+ + + +T A+ Sbjct: 795 VTLLCLRCGWHLTGKVSNIINMELKCPKCGMKTLTMLKHRDE--DINKAIKLITR---AR 849 Query: 959 RHTGSSEEVASYLENLLAVKRIFPAM 984 R + + YL L R+ Sbjct: 850 RGLQLTTDEEEYLSELRERARVIMDH 875 >UniRef50_D2EE81 DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EE81_9EURY Length = 899 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 220/886 (24%), Positives = 372/886 (41%), Gaps = 126/886 (14%) Query: 13 DVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 + S F + T +Q ++ + APTG GKTLAAFL LD+L Sbjct: 2 ENLSTKLEKILKEMGFTELTEIQKAVIPKIKEGKNIIFRAPTGYGKTLAAFLPLLDKLKP 61 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 + + ++LYI+P+K+L D+ +N+ ++ + V IR Sbjct: 62 DA----------EGIQLLYITPLKSLNRDIFKNIINI------------SNKMGIEVDIR 99 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRG 190 GDT A ER+ PP LITTPE++ +L S R E L+ ++ VI+DE+ ++ SKRG Sbjct: 100 HGDTTAYERANQATMPPHCLITTPETVQSILLSKRLVEKLKNLKYVIVDEIQSLMESKRG 159 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 ++ LERL + + Q +G+SAT+ + +L + V + I + Sbjct: 160 TQFSVGLERLRRI--ANFQIVGISATISDFKETKEYLSAEES---VEFSGDKEYDIEVTY 214 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P N +D + A I +E+ + +STI+FTN+R AE L + Sbjct: 215 PSFNNEDEEVASKENVSKLVANSLRY--------ISEEIKKSKSTIIFTNTRETAELLGS 266 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 RL++ + HH S+SKE R E A Sbjct: 267 RLSKFLKDKKME-------------------------------VHHSSLSKEVRMEIENA 295 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 K G++ ++ATSSLELGID+G VDLVIQ +P V +QR+GR+ H G++KG Sbjct: 296 FKIGDIDLMIATSSLELGIDIGNVDLVIQYMSPRQVIKLIQRVGRSNHNQLGIAKGKLVT 355 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 D ++S I C +LE ++ P LD+LA Q V + +E + V+++ Sbjct: 356 INIDDYLESKAIDNCRLKRKLEVISLPVESLDILAHQIVGLIIDGVQKNEEIFKVVKKSY 415 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 +KDL + FD +D L Y + L L + + +IP Sbjct: 416 AYKDLKKEKFDQVIDFLIKHYMIRYY------------GDTLIRTRKGLLFYINNISSIP 463 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIVTP 609 ++ Y V+ + ++R+G LDEE V E ++ + + +W+I +I ++ VT Sbjct: 464 NKKSYVVI-----DSLLNKRIGVLDEEFVAENAKPGNNFIMRGENWKIIKIENQKIEVTR 518 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLI 669 +P W GE + E D + ++ Sbjct: 519 TNSNIGAIPAWEGELMPVYRFVAEEAADLREKYSSK--------------------FSVL 558 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 +EQ+ ++P S+ +V+E+ D +++HS +G +E A A+ +I + G Sbjct: 559 KEQKENF-VIPNSKRIVVEKVDD-----YVVIHSTFGSMTNEAIAKALTSKITEIIGESV 612 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 I + K+ D I L + L + ++E + ++L+ RF A R + Sbjct: 613 ISKIDPYRITIKTHLPAEKIKDLIINLND---LEKRIKENIKRTSLYEYRFLNIAKRFGV 669 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + + +L + + Y + + ET +E D+ + E +++++N Sbjct: 670 INKYADFTKI----------RLRSLIELYDNSILEEETFKEIFSSKVDIKSAEDILKKIN 719 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 GEI I V SP A L + + + R VL Sbjct: 720 SGEISIV-VNDGEASPLAYESLETSYGGSIIKPNEAKKALRQLVLE 764 >UniRef50_B6YWG2 Large helicase-related protein n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YWG2_THEON Length = 925 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 238/1035 (22%), Positives = 391/1035 (37%), Gaps = 139/1035 (13%) Query: 16 SPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 + F + +Q + + + + L+IAPTGSGKT AA L + + EG Sbjct: 2 HLLLKKTIRERFGKLNELQMKAFREVSSGKSVLIIAPTGSGKTEAAVLPVFNAILEEGL- 60 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 K LYI+P+KAL D+ L+ + + V +R GDT Sbjct: 61 --------KPISALYIAPLKALNRDLLERLE------------WWGKRLGISVEVRHGDT 100 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 A +++K T+NPP +LI TPE+L ++LT R+ L V+ VI+DE+ + +KRGA L Sbjct: 101 SAYKKAKQTKNPPQMLIITPETLGVILTVKSLRKALENVKFVIVDEIAELVDNKRGAQLL 160 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L+LERL + +RIG++ATV + +V +LG + T+V P + + ++ P Sbjct: 161 LNLERLVEI--ADFKRIGMTATVGNEDEVREWLGAE---TIVKPSWRKAYRFHVLYPRPE 215 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 D + A R ++W + V H ++FTN+R AE L RL Sbjct: 216 EKDFKLAEELSLAPDVAARLRTLW--------EIVEEHGKALIFTNTRQFAEILAHRLK- 266 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + HHGS+SKE R E+ALK G Sbjct: 267 --------------------------------AWGKPVEVHHGSLSKEARIKAERALKEG 294 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 +++ ++ TSS+ELGID+G VD+VIQ +P V +QR+GRA H++G VS+G Sbjct: 295 KIKALICTSSMELGIDIGDVDVVIQYMSPRQVNRLVQRVGRAKHRIGEVSEGYVITSNVE 354 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWK 493 D + S +I GR E + P LDVLA V + + Y RRA ++ Sbjct: 355 DYLQSLIIARRALEGRFEAV-EPIGGLDVLAHFLVGLLIEYKRMPRERPYEIARRAYVYR 413 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 +L + L +L + +++E +L R GA + TIPD Sbjct: 414 ELKWEEYLDVLGILEDAR----------LIGYDKEKNLLYLRRGAFQYYYENLSTIPDEV 463 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI--VTPAP 611 + V + +G LDE V + + SW + +I + + V + Sbjct: 464 SWRVF-----DSGSGHIIGRLDESFVMDLEEGMEFVMNGRSWIVLKIDEEAKLLRVRESK 518 Query: 612 GRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEE 671 + +P W GE P + +G L F + + + ++ EE Sbjct: 519 SLESAIPSWEGEMIPVPFGIALDVGRLKRELTFD--FKRALELLEGVDFSEVELRRAFEE 576 Query: 672 QRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASV 731 ++ G R +V+E +++H+ +G R +E + + +G SV Sbjct: 577 IKD--GPFSTDRDIVIESTP-----KALVIHADFGNRANEALGRLVHSFLILRYGRVFSV 629 Query: 732 VASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMP 791 + IV + P EPE L IV ++ S + R A R + Sbjct: 630 RSQAHAIVFKTPFQLNPSEVKRYLYQEPEALEFIVARSLRDSHAYRWRMMNVAKRFGALR 689 Query: 792 GRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGG 851 R I + + + E L E D D+ E ++ L G Sbjct: 690 RDAKIRR---------------IERLFEGTVIEREALNELYHDKVDVKRGELVLSMLKAG 734 Query: 852 EIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPG 911 +++ PS A L EF+ EL R+ + ++ Sbjct: 735 SLRVKTELRREPSRLAR-LNMSVGGEFLIGG----------------ELERDEILELFKR 777 Query: 912 ELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYL 971 LLD +V+ V + R ++ E + + ++ Sbjct: 778 RLLDHEVV-LVCTNCGWSSKTRVSRLRERIKHW-----ECPKCGSRMLAVAHPIDAEEFM 831 Query: 972 ENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRY 1031 L V+ + + AA L D+ G +L + Sbjct: 832 PILKKVRHGERLERKEERAYRKLLKAADLIDSYGFDAVLALASYGTGPDTAA-----RLL 886 Query: 1032 LRAHALVTAEQLAHE 1046 + L Sbjct: 887 SQYRGEALLVALMER 901 >UniRef50_D2RFY4 DEAD/DEAH box helicase domain protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2RFY4_ARCPR Length = 859 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 211/895 (23%), Positives = 353/895 (39%), Gaps = 157/895 (17%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 K+ +Q A+ + L+ APTGSGKT A + L+++ + Sbjct: 2 LVEALREIGIKRLNDLQKVAIPRVAKGLNVLITAPTGSGKTECATIPILNKMLK------ 55 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 K LYI+P++AL D+ R L+I ++ + +R DT Sbjct: 56 ---MDCKGITFLYITPLRALNRDMIRRLKIL------------ADKLGFTIAVRHSDTSN 100 Query: 138 QERSKLTRNPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALS 196 ER + PP ILITTPE+ ++ L R RE+LR V+ V+IDE+H +A SKRG LA++ Sbjct: 101 AERRLQSLKPPQILITTPETFQILFLGRRLRESLRNVQFVVIDEIHELADSKRGVQLAIA 160 Query: 197 LERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMD 256 LERL L + Q IGLSAT+ +A ++A F G + V N Sbjct: 161 LERLREL--ANFQVIGLSATLSNAKEIAEFFGMEDVVE------------------WNGK 200 Query: 257 DVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 V G+ E I V HRS+++FTN+R AE Sbjct: 201 KVYEFRVVKGD--------------EEEIARIVKNHRSSLIFTNTRQTAE---------- 236 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 + ++ + HH S+S++ R E+ G+L Sbjct: 237 ------------------------TLGLKLKKMLKIEVHHSSLSRDVRIEAEKMFAEGKL 272 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 +V TSS+ELGID+G VD V+Q +P V +QR+GR+GH++ VSKG ++ Sbjct: 273 DALVCTSSMELGIDIGHVDAVVQYNSPREVKRLIQRVGRSGHRLEEVSKGYIVANEFDEI 332 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 ++S IV+ G +E + P PLDVLA Q VA M+ + Y V+R + DL Sbjct: 333 LESWAIVKRAKKGLIERIEPFSKPLDVLANQIVAM-LMEGYDLGAIYEIVKRVKFYDDLS 391 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYS 556 F+ L + L+ N + + ++ IPD Sbjct: 392 EEEFNEICAFLE-----------KNGLIRNGK-----VTRSGRRYFYSNISMIPDEKKVK 435 Query: 557 VLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSAR 616 V+ + A + +G LDE V N + + WRI I D V V Sbjct: 436 VV-----DTATHKVIGYLDESFVSLLDHN-VFAMKGELWRIVAID-DVVRVERVESE-GV 487 Query: 617 LPFWRGEGNGRPAELGEMIGDFLHLL-------ADGAFFSGTIPPWLAEENTIANIQGLI 669 +P W GE P E+ + +G + + + + +E + + +I Sbjct: 488 VPSWLGEEIPVPFEVAQDVGKIRRWICNLLRSFSKEEVVDILMQEFNTDEGSCKVVLDVI 547 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 E + + +E G +++++ +G +V+E A I+ + Sbjct: 548 ERCLKEGYRIATDDVVTIE------GKGNVVINACFGHKVNETIAKLISLFL----PKPF 597 Query: 730 SVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALL 789 + I + + D + + +K+ +++ A+ S + +F E A R Sbjct: 598 EISVEPYRIRIK-GNVDADYVKDVLMKIDVDKIAELIEIALIDSKVMQYKFVEVAKRFGC 656 Query: 790 MPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLN 849 + R+ +L + PV +E L+E + D DL +++++ Sbjct: 657 LD----------DVGRINIRRL---IEKMRGKPVYIEALKEVIHDRLDLDRTAFVLKKIQ 703 Query: 850 GGEIQISDVTTTTP-SPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRN 903 GEI+I +P S + + D +A + + + Sbjct: 704 SGEIEILVYEECSPLSKLSE----------LRIGDIVGDREKAILKAFKERIENE 748 >UniRef50_Q0C4L0 ATP-dependent helicase, DEAD/DEAH family n=6 Tax=Alphaproteobacteria RepID=Q0C4L0_HYPNA Length = 875 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 229/943 (24%), Positives = 364/943 (38%), Gaps = 111/943 (11%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 M D P LP PA WF R P Q + AL+IAPTG GKTLA Sbjct: 1 MPDTAPPPFQLP----PAFAAWFARRGWSPRPHQLALAETSLSGGSALLIAPTGGGKTLA 56 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 FL +L L ++ ++ + LYISP+KAL DVQRN+ P+ +A Sbjct: 57 GFLGSLIELAQKPRSNSHI----PSLHTLYISPLKALAADVQRNVMTPVTEMA------- 105 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 + +R+ RTGDT R + + PPDIL+TTPE L L++ S A ++ VIID Sbjct: 106 ---LPIRIETRTGDTATHVRQRQRKTPPDILLTTPEQLALLIASDNAANFFADLKCVIID 162 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP- 238 E+HA+A SKRG L+L L L + + +GLSATVR +A +L + P Sbjct: 163 EIHAIAPSKRGDLLSLGLATLAE-WSPTCRFLGLSATVRDPEQLAGWLDVRSAPSTPLPS 221 Query: 239 -------------------------PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGR 273 P I V + ++ Sbjct: 222 GRGAGVRGQPSSASPVATSHAQPLLPERARGPIPSVHIIQTPTTINPDIDILVSRQRIPW 281 Query: 274 EGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF 333 G + + + + + T+VF N+R AE L L L Sbjct: 282 SGHSGRFAVPEVYEAIRDAKMTLVFVNTRSQAELLFQELWAANEDNLP------------ 329 Query: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 HHGS++++QR E A+ +G L+ VV TS+L+LGID G Sbjct: 330 ------------------IALHHGSLARDQRERVEAAMAAGLLKAVVCTSTLDLGIDWGE 371 Query: 394 VDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN 453 VDLVIQ+ P A +QRIGR+ H++ SK L P R ++++ + AG ++ Sbjct: 372 VDLVIQMGAPKGAARLIQRIGRSNHRMDEASKALLVPTNRFEVLECRAAQAAVEAGEIDG 431 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 P LD+LAQ + A + + Y +RRA P+ L ++ +D ++ + Sbjct: 432 DGPRAGALDILAQHIMGRACGEGFHLPALYDEIRRAQPYAALDWETYERLVDFVATGGYA 491 Query: 514 GDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAG------ 567 ++V + + P + + G I + M SV L A Sbjct: 492 LKTYDRFHRIVRRADGLWVARTPRDKQAHRMNVGAIVEAPMLSVRLASFAGGASPNSGGG 551 Query: 568 --------SRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPF 619 R++GE++E + D R+ I +VT A S +P Sbjct: 552 EQRRAIRAGRKLGEMEEYFLSLLTPGDTFLFAGEILRLLTIDGMDALVTRAQSDSPAIPT 611 Query: 620 WRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIV 679 + G L + + +H + + W E + + Sbjct: 612 YNGGKFPLSTFLADRVRHMIHNPEEWKHLPDPVREWF--------------EIQELRSAI 657 Query: 680 PGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIV 739 P HL++E ++ + GR H+ + + R+ VAS+ + Sbjct: 658 PPPDHLLVETF-PRADRHYLVSYPFEGRLAHQTLGMLVTRRLERAGAKPVGFVASEYAMA 716 Query: 740 ARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRT 799 + L A I F PE L + E + SAL F CA + L+ PG Sbjct: 717 VWGMEDMRGLDMAEI--FHPEMLGDDLEEWLDESALMKRTFAHCALISGLIHRNMPGTEK 774 Query: 800 PLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDV 858 Q + ++ + + P ++ T + + D+ L ++ R++G I Sbjct: 775 NSRQVTFSTDLIFDVLRSHEPGHILLQATRADAATGLLDVRRLSDMLARIHG---HIVHK 831 Query: 859 TTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELL 901 SPFA ++ E ++ + A A R + L + + Sbjct: 832 PLAKISPFAVPVMLEVGREPVFGASAMEAILREAEEDLVRDAM 874 >UniRef50_Q7UX43 Putative ATP-dependent helicase n=1 Tax=Rhodopirellula baltica RepID=Q7UX43_RHOBA Length = 860 Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats. Identities = 206/903 (22%), Positives = 366/903 (40%), Gaps = 85/903 (9%) Query: 1 MADNPDPSSLLPDVFSP--ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKT 58 +A + S+ + P +F +P Q TW + LV + TG+GKT Sbjct: 26 LARSMPASASKTERIQPRALVDRFFEVRDSKPFLFQRSTWKTYLDGKSGLVHSATGTGKT 85 Query: 59 LAAFL-YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 LA ++ L + + ++L+++P+KAL D +Q + + Sbjct: 86 LAVWMGPLLQWMKANKDPGKWNPKRPPGLQVLWVTPLKALAGDTTAAMQAAIDEMNLPWD 145 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETV 176 +G RTGDT A +++ + P ++TTPESL LMLT R + L ++ V Sbjct: 146 LQG----------RTGDTKASLKARQMKRLPTAMVTTPESLTLMLTHERLQPQLSELKAV 195 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD---RPV 233 I+DE H + G+KRG L+L RL L + Q G+SAT+ + + L G Sbjct: 196 IVDEWHELLGTKRGVQTELALARLRRL-SPTLQTWGVSATLGNLDEALESLVGPANTDDA 254 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 +++ + + ++ ++P G I + + EV + Sbjct: 255 VIIHGKSKKKTKLYSILPPVIER--------------FPWSGHIGTRMIPEVAKEVEQAS 300 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 S+++F N+R E +L + Sbjct: 301 SSLIFANTRSQTEIWYQKLLAH-----------------------------RPDWAGQIA 331 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 HHGS+ R E L+ G L+ VV TSSL+LG+D AVDLVIQ+ +P A LQR Sbjct: 332 LHHGSLDTSVRQWVENGLREGSLKTVVCTSSLDLGVDFTAVDLVIQIGSPKGAARLLQRA 391 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 GR+GHQ G +S+ F P +L++ A + + G+LE+ +P+DVL Q V A Sbjct: 392 GRSGHQPGAISRLAFVPTNAFELIELAAAQDSIRDGKLESRPLIKSPMDVLTQHLVTIAI 451 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 + E + VR+ ++ L + + +D + + D ++ + + Sbjct: 452 GGGFESSELLAEVRQTRAFESLSEQQWQFAIDFVVRGGSTLDAYPEFKRVELV-DGRYVV 510 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGAT 593 + + GTI V +G +G ++E + + + D Sbjct: 511 TQKRVMSNHRMNIGTIVSDASMRVKFLKGGT------LGTVEESFLSKVSIGDKFLFAGR 564 Query: 594 SWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIP 653 + +I + V A G +P W G +EL + + L A+G + + Sbjct: 565 LVELVRIDNSEAYVKRAKGAPDAVPRWMGGRLPLSSELAQGLRTKLQQAAEGDYVGPEMK 624 Query: 654 PWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPW 713 ++ L++ Q + VP + L++E R G +++ + GR HE Sbjct: 625 ----------RMRPLLQLQAKWS-HVPAANELLIESIRTRDG-YQLFFYPFAGRLAHEGL 672 Query: 714 AVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS 773 + +A R+ + S +D G V P L P++L+ + E++ ++ Sbjct: 673 SAVLAHRMSRIEKISFSFACNDYGFVLTSPKPAPLQQALDAGLLSPDRLVADIGESLNAT 732 Query: 774 ALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECL 832 + FR A A L+ G PG + P + ++ E+ + Y PD ++ + E L Sbjct: 733 EMSRRGFRAIARIAGLIHGGYPGRQKPNKHLQASSNLFFEVFREYDPDNLLLHQCNEEVL 792 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRAS 892 ++ + +E +RR+ G + + +P LL + E + S LAER A Sbjct: 793 ENQLNASRMEDALRRIEGSQ--VVIREPEKVTPMGFGLLVDRLRERL--SSETLAERIAR 848 Query: 893 VLS 895 + + Sbjct: 849 MQA 851 >UniRef50_B4RRM3 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=5 Tax=Proteobacteria RepID=B4RRM3_ALTMD Length = 868 Score = 579 bits (1492), Expect = e-163, Method: Composition-based stats. Identities = 214/935 (22%), Positives = 354/935 (37%), Gaps = 123/935 (13%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 A WF + Q Q + + L+IAPTG+GKTL+ FL +L L Sbjct: 3 SLPAAFSKWFKQKGWQLRDYQQTMLTEKDQHDCTLLIAPTGAGKTLSGFLPSLIELAETY 62 Query: 74 GEDTREAHKRKTSRI-----------------------------------------LYIS 92 G + I LYIS Sbjct: 63 GMSELAETVDDGAPIEVSETRQLSGSRETDEHVETKATDRQAKKGKEKGGFNGLHTLYIS 122 Query: 93 PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILI 152 P+KAL D+ RNL P++ + + + RTGDTP+ +R + + PP+IL+ Sbjct: 123 PLKALTQDIHRNLLQPIEEMG----------LPITAETRTGDTPSHKRQRQRKKPPNILL 172 Query: 153 TTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRI 211 TTPESL LML + A + ++ VIIDE H++ +KRG L+L+L RL ++ +RI Sbjct: 173 TTPESLMLMLSYADADKLFGKLKRVIIDETHSLMANKRGDFLSLALARL-SVFSPHCKRI 231 Query: 212 GLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHA 271 GLSATV + A+L G V + S Sbjct: 232 GLSATVAFPETLGAWLAGSDSVANIIKVKAGEKPK---------------VEMLHSKSRM 276 Query: 272 GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA 331 G + Y I + ++T+VF N+R +E L L E A L Sbjct: 277 PFGGFMARYAIDDIYQAIENAQTTLVFVNTRAQSELLFQMLWEANKAALP---------- 326 Query: 332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM 391 +HGS+SKEQR TE + SG LR +V TS+LELGID Sbjct: 327 --------------------IALYHGSLSKEQRRKTEAMMASGMLRAIVCTSALELGIDW 366 Query: 392 GAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRL 451 G VD VIQV P V+ LQRIGRA H++ S+ L P R + ++ + + G L Sbjct: 367 GDVDKVIQVGAPKGVSRLLQRIGRANHRLDEPSEALLVPANRFEALECQAAITAIEKGEL 426 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 + +P LD++ Q + A D Y + A P++ L R FD Sbjct: 427 DGESPQPGALDIIPQFILNCLCSKADSPDTLYQEILTATPYQGLDRDDFDKLWQFTQDGG 486 Query: 512 PSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 + + +L N + A + GTI + G V + + + Sbjct: 487 SALNAYERYQRLARNDDGTFSPANRRVIQRHRQNIGTIVEAGRLKVKRIRRGNQ--GKII 544 Query: 572 GELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAEL 631 GE++E + D G R + I Q+ PA + ++P + G L Sbjct: 545 GEVEEYFAQQLTPGDTFYFGGEVLRFEAIRDMQLHAKPAKAKEPKIPSYAGGQMPLSTYL 604 Query: 632 GEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCR 691 E + L + WL + A +P +++E+ Sbjct: 605 AEGVRAILATQTLWKTLPAQVQEWLKL--------------QQAFSQLPSPEKVLVEQF- 649 Query: 692 DEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPD 751 + ++ GR+ ++ + + R+ + S +D G + + Sbjct: 650 PFRQAHYTLYYTFDGRKANQTLGMLLTRRMEKMGIKPLSFSVTDYG--LSVASVNPISQV 707 Query: 752 AAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQL 811 LF+P+ L + + + + + FR+ A + L R + + Q + Sbjct: 708 QLQQLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHASQKTMKQVTFSTDLI 767 Query: 812 LEIAQGYP-DFPVILETLRECLQDVYDLPALERLMRR-LNGGEIQISDVTTTTPSPFATS 869 + + + D ++ + +++ DL L L+ R ++ + V PSP A Sbjct: 768 YDTLREHDRDHILLKVARADAERELLDLRRLANLLIRYVDSATL----VNLEKPSPMAIP 823 Query: 870 LLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNL 904 ++ +E + + A +A++ + +L + Sbjct: 824 IVLDVRSEQVKGAGAQAIIEQANLYAEAETMLDEV 858 >UniRef50_A2BMA9 DEAD/DEAH box helicase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMA9_HYPBU Length = 955 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 240/1017 (23%), Positives = 396/1017 (38%), Gaps = 131/1017 (12%) Query: 14 VFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + P R R + +PT +Q + + R H L++APTGSGKT AA L A+ + Sbjct: 16 LLHPVLRAVLPRYGYIRPTEIQEKAIPLILRGNHVLIVAPTGSGKTEAALLPAMSSILPM 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G ++YI+P+++L D+ ++ + V LR+ +R Sbjct: 76 RGFTG-------KIYVVYITPLRSLNRDIFARMKSL------------ASSVGLRLEVRH 116 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGA 191 GD+ E+ + NPP I+ITTPES Y +L + RE + ++ VI+DEVH + G KRGA Sbjct: 117 GDSTELEKRRFLENPPHIMITTPESFYFLLSVEKFREAISELKYVIVDEVHELVGDKRGA 176 Query: 192 HLALSLERLDALL-HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 L+L+LER +L Q +GLSATV V L G R V +V R + +V+ Sbjct: 177 ELSLALERAISLYVKGKVQLVGLSATVAEPELVVRKLFGSRYVRIVEASMARKYNVGVVL 236 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + S E+ + I I + + S IVFTN+R AE + A Sbjct: 237 PSRDNTVNGLELSEFNEELYEDTIDRI-----AYIANVIREKGSVIVFTNTRDTAELIGA 291 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L ++ HHGS+S+E R E+ Sbjct: 292 LLKKVLGENS-------------------------------IEVHHGSLSREHRLSIEER 320 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 + GE+ +VATSSLELGID+G V V+Q +P V +QR+GRA H+ G + G+ Sbjct: 321 FRKGEIAALVATSSLELGIDIGHVGYVVQYLSPRQVVKLVQRVGRARHRAGEAAAGVVVA 380 Query: 431 -RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA-LQVDEWYSRVRR 488 R D+++SAVI G LE L PPH PLD L Q + + + + Y V R Sbjct: 381 SRNLFDVLESAVIAARTSRGNLEKLKPPHAPLDALVHQVAGTVIENPGIDIGKLYLLVTR 440 Query: 489 AAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGT 548 + ++ L F A L + ++ R+ + R + + Sbjct: 441 SGFYEGLDFDEFMAVLSYME-----------HAGIIRIRDGKLYPGRK--CMSYYFNSTM 487 Query: 549 IPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVT 608 I + Y V + +R+G LDEE V V + L W + + V V Sbjct: 488 ITESIQYPVY-----DVVSGKRIGLLDEEFVASLDVGEKFVLAGRVWEVVGFDENGVRVK 542 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGL 668 P+ P W G+ + + L +G + + + + + Sbjct: 543 PSSEDRLIPPAWEGDLIPVEHNVAREVASILRRFGEGH--TEVLDMYPLSDTARRYVGEK 600 Query: 669 IEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 + + G +P R +++E D +++ G R ++ +A I + G + Sbjct: 601 LLQAMRELGFLPHDRRILVEHYGD-----TYVVYVFLGSRGNKSLEYLLAYYISQIKGYN 655 Query: 729 ASVVASDDGIVARIPDTDGKLPDA----AIFLFEPEKLLQIVREAVGSSALFAARFRECA 784 ++ IV ++P+ + P L ++ EAV S L++ A Sbjct: 656 VLSASTPYAIVLKLPERSEPGLVEMVIKRLAELPPSTLEEMYVEAVKKSRLYSWILYRVA 715 Query: 785 ARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERL 844 RA +P L + + + +E LRE +L ++ L Sbjct: 716 QRAGALPASRRARDPS---------MLKRVVAQLANTILGVEALREFENRKGNLEVVKAL 766 Query: 845 MRRLNGGEIQISDVTTTTPSPFATSLLFG------YVAEFMYQSDAPLAERR---ASVLS 895 +R + G + IS V+ PSP ++ V M + A +R A + Sbjct: 767 LRDVGKGYVLISTVSRRNPSPLTEDIISEALFSDRVVRTQMPATLVAEAVKRRIKARQVI 826 Query: 896 L-----------DSELLRNLLGQVDPGELL-----------DPQVIRQVEEELQ-RLAPG 932 L L + + L D ++ + + + Sbjct: 827 LICLVCGYKWQRRVSELPQEIKCPNCSSKLVYVTTVEEKARDASMLAMKRKRVGLSRSEN 886 Query: 933 RRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQE 989 +R + + +L+ + G VE L R G S L+ L+ + F + E Sbjct: 887 KRMREYIEVANLVMDYGRYAVEALVARGVGVS-TARRVLQKLVFSEDAFYKALVEAE 942 >UniRef50_A8AC71 DEAD/DEAH box helicase domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AC71_IGNH4 Length = 894 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 215/845 (25%), Positives = 352/845 (41%), Gaps = 128/845 (15%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 SLLP A R + + PT +Q + + + H L+ APTGSGKT AA L Sbjct: 4 FSLLPKELREALR---KKGIRSPTPIQEKAIPIILQGYHTLITAPTGSGKTEAALLPVAA 60 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDV-QRNLQIPLKGIADERRRRGETEVNL 126 R+ ++G + LYI+P++AL D+ R L++ E L Sbjct: 61 RIIQKGSFG--------GLKALYITPLRALNRDIGIRALELL-------------REAGL 99 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVA 185 V + GDTP R K+ +PP++L+TTPESL ++L + L VE VI+DE+H + Sbjct: 100 NVDVWHGDTPYSRRKKIIEHPPEVLVTTPESLNIILANKEMLKHLNNVEYVIVDELHELI 159 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 KRGA L ++LERL QRIG+SAT+ + + FLGG R V V ++ P+ Sbjct: 160 EEKRGAELTVALERLSE--RARVQRIGVSATISNVNLAKKFLGGGRFVIDVADETVKKPE 217 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR-HRSTIVFTNSRGL 304 I++ V + + + + + + + + +VFTN+R Sbjct: 218 IKVYV------------------------EDSFENMVSKVKEIIKKIDGTVLVFTNTRDT 253 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 AE L L E + HHGS+SK++R Sbjct: 254 AEVLGKILKEEFGEE--------------------------------VAVHHGSLSKKER 281 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS 424 E+ + GEL+ +VATSSLELGID+G+V V+Q A+P V + +QR+GRA H+ Sbjct: 282 EGVERRARKGELKVIVATSSLELGIDIGSVKHVVQFASPRRVTNLVQRVGRAEHKPYESP 341 Query: 425 KGLFFP-RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 KG + ++ VI + G LE + NPLDVLA Q V + + Sbjct: 342 KGSVVTGLKPYEAFEALVIAKRAERGNLEEIRVHENPLDVLAHQIVGTLVEGPRHKERLF 401 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 VRRA P+ L + F+ ++L + + + A ++ Sbjct: 402 DLVRRAYPFWGLSYQDFEEVFNLLVEN------------KLVSCDGSFCRATKKGEIYYR 449 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 T+ G I + Y V+ + VG LDEE V + D LG W+ + + Sbjct: 450 TT-GMIVESKQYKVI-----VYGTNEVVGTLDEEFVVDLEPGDTFVLGGKVWKFIGMENE 503 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA 663 V V + G P W GE ++ +G F I + ++ Sbjct: 504 NVYVERSEGEGP-PPSWEGELIPVDRKVAREVGALKR------AFDLLIDNYPTDQEGKE 556 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 ++ + + G V + +V E + I+ + G + + A A++ Sbjct: 557 RLREFLRSVK---GPVANDKVVVAE-----VEGNVIVYNVHGGSKANLALAYALSELARY 608 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIF-LFEPEKLLQIVREAVGSSALFAARFRE 782 +G AS + ++ +P + +F + + L +VR+AV S L+A R + Sbjct: 609 EFG-SASFNTTPYHVILFLPKQADEATAERLFKSLKYQDLEALVRDAVKQSKLYAWRLSK 667 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 R L+ L + + L ++ Y D P E ++E L + D+ + Sbjct: 668 VLVRMGLLNR----KSISLDELKKVEKTLRKV---YLDLPPGKEAMKEILVEKLDIEGAK 720 Query: 843 RLMRR 847 ++ + Sbjct: 721 EILEK 725 >UniRef50_C3NGE7 DEAD/DEAH box helicase domain protein n=12 Tax=Sulfolobaceae RepID=C3NGE7_SULIN Length = 912 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 209/901 (23%), Positives = 368/901 (40%), Gaps = 124/901 (13%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 +V + ++ T +Q ++ L+IAPTG GKT AA L +F++ Sbjct: 3 NVTNEFLVRLKKLGYEDLTPIQKIAIPKILSGKNVLIIAPTGYGKTEAAILPIFYTIFKD 62 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 K + LYI+P++AL D++ L+ R + V +R Sbjct: 63 ---------KPEKISTLYITPLRALNRDLESRLK------------RVGDAFGISVNVRH 101 Query: 133 GDTPAQERSKLTRNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGA 191 GD+ +ER ++ NPPD+LI TPE+L YL+L R+ ++ +IIDE+ + KRG Sbjct: 102 GDSSQRERKEILDNPPDVLIVTPETLLYLILNDTFRKYFTNLKWIIIDELQEMLDEKRGI 161 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 L++ L+R+ + Q IG+SAT+ +L + V V + A++ ++ +++P Sbjct: 162 ELSVLLQRIKKITRNRIQLIGISATIGDIEMAKIYLDREGEVEVASINAIKDIKVNLILP 221 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 D R + I+ + FTN+R +E + Sbjct: 222 KVEKKDADLAVRLGLRPDTIARLEKLNEIIKNNKPIII--------FTNTRETSEFVANH 273 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQAL 371 L Y+ + SHHGS+S+E R TE Sbjct: 274 LTSNYSLK--------------------------------IGSHHGSLSREIRIKTENDF 301 Query: 372 KSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPR 431 KSG + +VATSSLELGID+G ++LV+Q +P V +QR+GR+GH++G S G P Sbjct: 302 KSGNIDAIVATSSLELGIDIGRINLVVQYMSPRQVIRLIQRVGRSGHKIGRTSIGYVIPS 361 Query: 432 TR-RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 D+++ I+E +++ LE NPLDV A + +E +R + Sbjct: 362 EDVFDILECRAIIEALYSSYLEKPLFEENPLDVAAHEIAGMVLEGYKNPNEILEILRNSF 421 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 +K+ +F++ +++L K+V RE G L T+ IP Sbjct: 422 YFKNFTDEMFESVIELLES-----------AKIVKRREDGSLVPSRRIWKYYYTTN-MIP 469 Query: 551 DR-GMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTP 609 D Y V+ + A + ++G LDE+ V + LG+ W++ I D++ V Sbjct: 470 DSIRSYIVI-----DHATNIKIGTLDEDFVASLDEESVFILGSKLWKVVSIENDRIFVER 524 Query: 610 APGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLI 669 A ++ LP W GE E+ + +++++L G + +I ++ Sbjct: 525 AELKNGILPSWFGESIPVEKEIARKVYEYIYMLEKGKIETED-----------DSISKVV 573 Query: 670 EEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADA 729 E +++E ++ + II+HSP+G R + I+ + Sbjct: 574 REFVERGYPELRPDLILVEIVKNNL----IIIHSPFGSRGNNTLGAIISVMLDVEKQTKT 629 Query: 730 SVVASDDGIVAR--IPDTDGKLPDAA--IFLFEPEKLLQIVREAVGSSALFAARFRECAA 785 S A I +P T+ + + K+++I++ + S F + Sbjct: 630 SYRADPYHIAISSVLPITENDMEKIVNTLNSLPIIKIVEILKRGIKESPQFKWK------ 683 Query: 786 RALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLM 845 LL+ + G P + L + I + Y D + E + E L YD+ ++ Sbjct: 684 --LLVEIKRFGMVDPEKEITLTS----SIIKAYGDTIIGEEAVNELLVKNYDIE----IL 733 Query: 846 RRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQ-SDAPLAERRASVLSLDSELLRNL 904 + L +I +V S A L + ++ + PL + L+ Sbjct: 734 KELKNYSWKIVEV--YEASSLARQFLDKILNYTVFDKEEKPLM-----IEIFKKRLVNKE 786 Query: 905 L 905 L Sbjct: 787 L 787 >UniRef50_Q8TGY8 Lhr-like Superfamily II helicase n=1 Tax=Methanopyrus kandleri RepID=Q8TGY8_METKA Length = 910 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 251/1014 (24%), Positives = 359/1014 (35%), Gaps = 157/1014 (15%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALD 67 LPD + F +PT Q ++ LVIAPT SGKT A L Sbjct: 5 FEALPDD----VQRVVYSRFDEPTPPQRVAIPEIMDGKNVLVIAPTSSGKTETAVLPVFS 60 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 + + LYI+P++AL D+ R ++ ++ L Sbjct: 61 MV---------RELDEPGIKALYITPLRALNRDILRRIR------------WWGEKLGLE 99 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAG 186 V +R GDTP ER + +PPD+L+TTPE+L +L R RE L V VI+DEV+ +A Sbjct: 100 VAVRHGDTPQSERRRQAEDPPDVLVTTPETLQAILPGKRMREHLSHVRHVIVDEVNELAL 159 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 KRG L L LERL + QRIGLSA V S V FL GDR V V+ A R+ + Sbjct: 160 DKRGVQLTLGLERLAEVAG-DFQRIGLSAAVGSPDRVGKFLVGDRDVEVLEIEAERYLDV 218 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + P + + I + S +VFTN+R +AE Sbjct: 219 SVAHPTGPHEVKERL---------------------ELIHELAKERDSVLVFTNTRQMAE 257 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L RL Y HH S+S+E+R Sbjct: 258 LLATRLKTEYDDIE-------------------------------VEIHHSSISREKRME 286 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ------RIGRAGHQV 420 E+ K GE+ +V TSSLELGID+G VDLV+Q +P V +Q + Sbjct: 287 VEKRFKKGEIDVLVCTSSLELGIDIGHVDLVVQYGSPRQVTRLVQRVGRAG-------RR 339 Query: 421 GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQV 479 ++GL DL ++AVI G LE P LDVLA Q V + V Sbjct: 340 RKRAEGLVITSNPDDLAEAAVICRRALKGSLEPTEIPEGCLDVLAHQLVGLCLDGHQVTV 399 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 D RRA P++ L + L D R + + A Sbjct: 400 DYALEVFRRAYPYRHLDAETLREVAEFL------DDIEVLRVR------GDRVYRTKDAW 447 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQ 598 ++ IPD Y V+ G V LDE V E R W +Q Sbjct: 448 KYYYSNLSMIPDERHYRVVTESGGH------VSVLDEPFVLEYLRPGIKFICAGRPWIVQ 501 Query: 599 QITRDQ--VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADG------AFFSG 650 + D+ V+VTPA +P W GE P E+ +G+ + Sbjct: 502 DVDHDRYEVLVTPAEAVEGAIPSWVGEEIPVPYEVAREVGEGIGRAEAALEDGFTEAVEV 561 Query: 651 TIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVH 710 + + LI QR + VP V+E +++H G + Sbjct: 562 AAETFGLGRREAKVLADLIRRQREHS-AVPLPERPVIEDL-----GGTLVIHVYGGTNPN 615 Query: 711 EPWAVAIAGRIHALWGADASVVASDDGIVARIPDT---DGKLPDAAIFLFEPEK--LLQI 765 + I G ++ IV D L + ++ + Sbjct: 616 RTLEKVLGTLISGRLGTTVRTYSTPYKIVISAEKRAGLDADLLMECLETLPSDERGFHAL 675 Query: 766 VREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVIL 825 V S +F R R + + + + P Sbjct: 676 TLRIVEKSEVFKRRLVHVLKRFGAIEPDADYRDVSPRRL----------LKAFKGTPPYY 725 Query: 826 ETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 ET+ E +D D RL++ L + V PSPFA +L + E + Sbjct: 726 ETVSEVERD-LDTSVAFRLVKELEE---KAEIVRVRDPSPFAEHVL-EGLGEVGRVTSGL 780 Query: 886 LAERRASVLSLDSELLRN--LLGQVDPGELLDPQVIRQVEEELQRLAPG----RRAKGEE 939 LA A V +L +L R LG + G V EE L+ G AK EE Sbjct: 781 LA---AQVETLKRDLERRKLWLGCPNCGWRGRRSVKTVKEEGLECPDCGATYLVAAKTEE 837 Query: 940 GLFDLLR--ELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERL 991 GL LL+ E + L + E +A A ++ + + Sbjct: 838 GLEKLLKDSERARRVADLLESYGAKALEALAVPGVGPEAAAKVLRSTGGREPHF 891 >UniRef50_Q2IR64 DEAD/DEAH box helicase n=81 Tax=Alphaproteobacteria RepID=Q2IR64_RHOP2 Length = 937 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 240/985 (24%), Positives = 363/985 (36%), Gaps = 160/985 (16%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 +AD+ P LLPD F R WF P A Q A AL+IAPTG+GKTLA Sbjct: 3 IADSDAPLDLLPDRF----RHWFAARGWTPRAHQLALLRQARAQRSALLIAPTGAGKTLA 58 Query: 61 AFLYALDRLFREGG---------------------------------------------- 74 FL L L Sbjct: 59 GFLPTLVELSEAAPNLSPIAGRGRLAGVAGKSGEGADELPIAGAAVCAEAPPHPARRAAL 118 Query: 75 -----EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 R + LYISP+KAL D+ RNL+ P+ + + +RV Sbjct: 119 AAPPSPRARGEGSSRGLHTLYISPLKALAVDIARNLEAPIAQM----------NLPIRVE 168 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET-LRGVETVIIDEVHAVAGSK 188 RTGDTP R++ + PPDIL+TTPE L L+L S ++ +++DE+HA+ SK Sbjct: 169 TRTGDTPVSRRARQRKYPPDILLTTPEQLALLLASDDAPYLFGSLQRIVLDELHALVTSK 228 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVT-------------- 234 RG L+L L RL + + GLSATV ++A FL V Sbjct: 229 RGDLLSLGLARLWRIA-PQLRATGLSATVADPDELARFLVPQPFVPSPLVGEGGAERSEA 287 Query: 235 -----------VVNPPAMR---HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPY 280 P + V + G + Sbjct: 288 TGEGASAGAEPAAYPSPRPSPTRGEGEQADIVVARGAAQPIVEMLDTKERLPWAGHSARH 347 Query: 281 IETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT 340 I D + R+ +T+VF N+R AE L L + L Sbjct: 348 ALAEIYDLIRRNTTTLVFVNTRSQAEMLFQELWRMNDDNLA------------------- 388 Query: 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV 400 HHGS+ QR E A+ +G LR VV TSSL+LGID G +DLV+ V Sbjct: 389 -----------IALHHGSLDVAQRRKVEDAMAAGRLRGVVCTSSLDLGIDWGDIDLVVNV 437 Query: 401 ATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNP 460 P + +QRIGRA H++ S+ + P R ++++ A ++ + + Sbjct: 438 GAPKGSSRLMQRIGRANHRLDEASRAVLVPANRFEVLECAAAIDAVAENAQDTPPQRTGA 497 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 LDVLAQ + A + DE Y VR AAP+ DL R FD TLD ++ + Sbjct: 498 LDVLAQHILGCACGEPFVADELYKEVRSAAPYADLSRADFDDTLDFVATGGYALKSYERF 557 Query: 521 PKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE----------GEEKAGSRR 570 ++ +++ A P + + GTI + M V L G G R Sbjct: 558 ARIRQDKQGKWRVANPKVRQAYRLNVGTIVEEAMLKVKLVRSAKSKGGGHTGAIARGGRM 617 Query: 571 VGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAE 630 +G+++E + D G R + + DQV V+ A + AR+P + G Sbjct: 618 LGQIEEYFIEGLTPGDTFVFGGEVVRYEALMEDQVYVSRAHDKDARVPSYMGGKFPLSTY 677 Query: 631 LGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERC 690 L E + L + WLA ++ + VPG LV+E Sbjct: 678 LAERVRGLLADKQAWKGLPDQVRDWLALQSKASR--------------VPGRSELVVETF 723 Query: 691 RDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVAR----IPDTD 746 + ++ + GR H+ + + R+ VA++ + Sbjct: 724 -PRAAKYYLVCYPFEGRLAHQTLGMLLTRRLERARARPLGFVANEYALAVWGLGDTSHMI 782 Query: 747 GKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRL 806 + LF+P+ L + + SAL FR A + L+ R G Q Sbjct: 783 RQGRLDLDALFDPDMLGDDLEAWLAESALMKRTFRYAAIISGLIARRFAGEEKSRRQVLF 842 Query: 807 RASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSP 865 + ++ + PD ++ + + DL L ++ R+ G +I SP Sbjct: 843 STDLVYDVLNKHQPDHVLLRAARADAATGLLDLRRLSDMLTRIKG---RIVHKELDRVSP 899 Query: 866 FATSLLFGYVAEFMYQS--DAPLAE 888 A ++ E +Y D LA+ Sbjct: 900 LAVPVMLEIGREAVYGEASDELLAD 924 >UniRef50_Q3AJL5 DEAD/DEAH box helicase-like n=17 Tax=Cyanobacteria RepID=Q3AJL5_SYNSC Length = 831 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 217/890 (24%), Positives = 356/890 (40%), Gaps = 90/890 (10%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL-YALDRLFREGGED 76 WF + P Q +TW+ + L+ PTGSGKT AA + L E Sbjct: 23 PIHAWFAQRNWTPLPFQQETWNAYLAGRNGLIQVPTGSGKTFAAVMGPMARMLAEE---- 78 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 K R++YI+P++AL D+ ++ P++ + +RVGIR GD+ Sbjct: 79 ----QPLKGIRLVYITPLRALSRDLSLAIREPIEAMGW----------PIRVGIRNGDSS 124 Query: 137 AQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLAL 195 + ER+K + PP IL+TTPESL L+L ++A E +ETVI+DE H + GSKRG+ L Sbjct: 125 SSERTKQLKAPPQILVTTPESLALLLSNAKAEELFGQLETVILDEWHELMGSKRGSQTEL 184 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAA-FLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L L L Q +SAT+ + A LG ++ R +IR ++P Sbjct: 185 CLSWLRQL-RPQLQTWAISATIGNIEQAARHALGTAGEPQLIGGAPARSTEIRSILP--- 240 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 G + + ++ + ST++FTN+R +E+ L Sbjct: 241 -----------DTIDGFPWAGHLGLRMYEELVARLNPGISTLLFTNTRNQSERWHQCLRF 289 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + HH ++ + +R E ++K+G Sbjct: 290 ACPEMEK-----------------------------GLALHHSAIDRSEREAIEASVKAG 320 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 +R VV TSSL+LG+D V+ V+Q+ +P ++A LQR GR+ H GG S+ LF P Sbjct: 321 SIRWVVCTSSLDLGVDFQPVEQVVQIGSPKNLARLLQRAGRSAHLPGGTSQVLFMPTNAL 380 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 +L++ + + + G +E PP PLDVL Q A + VR A + D Sbjct: 381 ELLELSAVRRGLVEGLVEQRKPPKAPLDVLLQHLTGLACGPGFNPEHTLQTVRSCAAYAD 440 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGA-QLLAVTSGGTIPDRG 553 L + +D + L KL W + R A L + GTI Sbjct: 441 LSQDDWDWCMLFLEQGGECLGAYPRYRKLEWEETSQRYRVREKAIARLHRLNVGTITAAP 500 Query: 554 MYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGR 613 +V G +G ++E + + + D+ ++ V + + Sbjct: 501 AITVRFVRGA------VLGHVEETFISQLKPKDVFFFSGRQLEFVRLRDMTAYVKVSTKK 554 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 + +P W G L + + + ++ L + Q+ Sbjct: 555 TRTVPAWAGGQMALSDLLTHHLR----------LEVDRASRGDLDNAELQALKPLFDRQQ 604 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVA 733 + + ++P L++E CR G + + GR VHE A R+ L +V Sbjct: 605 DIS-VLPTVGQLLIETCRTREG-THLFAYPFEGRFVHEGIGFLWASRLTRLERGTITVSV 662 Query: 734 SDDGIVARIPDTDGK---LPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 +D G P + L D L + ++L + ++ A+ S L RFR A A LM Sbjct: 663 NDYGFELLAPKSYPMAELLEDHIDLLLDRQQLERDLKNALNLSELQRRRFRAIAQIAGLM 722 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLN 849 P Q ++ AS L ++ + P+ ++L+ +E L D ++ LE ++R Sbjct: 723 NRGFPRSSKSTGQLQISASLLFDVFSRHEPNNRLLLQAQQEVLDDQLEISRLEAALKRAA 782 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 E V T PSP A LL + M +R ++ E Sbjct: 783 SQE--WLHVETPRPSPLAFPLLVERLNNRMSNESVLERVQRMKDEAIRKE 830 >UniRef50_Q470G5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=36 Tax=Bacteria RepID=Q470G5_RALEJ Length = 898 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 227/899 (25%), Positives = 344/899 (38%), Gaps = 80/899 (8%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 + P + LPD+ F QP Q W + + L+ A TG+GKT A Sbjct: 15 LTSAPPVARKLPDL--------FAARHWQPFDFQRAVWEAIGQGQSGLLHATTGTGKTYA 66 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A+L AL +R +L+++P++AL D R L PL + Sbjct: 67 AWLGAL---LAFASPPSRPGAPPPPLTVLWLTPMRALAADTTRALIAPLGELG------- 116 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIID 179 ++ VG+RTGDT + ER+ R P L+TTPESL L+LT ARETLR V V++D Sbjct: 117 ---LDWAVGLRTGDTSSSERAAQARQLPTALVTTPESLSLLLTRADARETLRSVRLVVVD 173 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 E H + GSKRG + L+L RL GLSAT+ + L R V + Sbjct: 174 EWHELIGSKRGVQVQLALARLHR-WQPDLCVWGLSATLGN-------LDHARDVLLAGVS 225 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 R + P + D S G + + ++ E+ +T+VF Sbjct: 226 PERRVLVHGHTPKTLIIDTL----LPDAASRFPWAGHLGLSMLPHVVRELEASGTTLVFL 281 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 N+R AE L + + + HHGS+ Sbjct: 282 NTRSQAELWYQALLDA-----------------------------KPEWAGLIALHHGSL 312 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQ 419 + R EQ LK+G LR VV TSSL+LG+D V+ V+Q+ +P VA LQR GR+GH Sbjct: 313 DRAVREWVEQNLKNGALRAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHA 372 Query: 420 VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 G S+ P +LV++ + AGR+E P PLDVL Q V A + Sbjct: 373 PGRASRVTVVPTHSLELVEAVAARQAALAGRIEARDSPDKPLDVLVQHLVTVALGGGFRA 432 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 E + VR ++ L + L + + + + + + Sbjct: 433 SELLAEVRTTWAYRALTDEEWQWCLAFVRDGGGTLSAYPDYRRAMPDDDGVWRVPDARLA 492 Query: 540 LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQ 599 S GTI V +G +G ++E + D G + + Sbjct: 493 RRHRMSVGTIVSETTMQVRY-WTRAGSGGASLGTVEEGFIARLAPGDCFLFGGRLLELVR 551 Query: 600 ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 V A G+ +P W G EL + + L + G P Sbjct: 552 TQEMTAYVRRATGKRPAVPRWNGGKMPLSTELADAVVTTLDAVQAGRLDPSATPELP--- 608 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + + E + +P L+ E G W + L+ GR VH +A Sbjct: 609 -----LIQPLVELQMRWSALPTPETLLAETLHSREG-WHLFLYPFAGRSVHLGLGSLLAW 662 Query: 720 RIHALWGADASVVASDDGIVA--RIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFA 777 R+ A SV +D G+ P + + L V ++ + L Sbjct: 663 RLGQKVPATFSVAVNDYGLELLASAPLDWSQWLPRVLAEERHRDLAADVLGSLNAGELSL 722 Query: 778 ARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVY 836 RFRE A A L+ PG Q + +S E+ + Y P ++ + RE L Sbjct: 723 RRFREIARVAGLVFQGYPGAAKSARQLQASSSLFYEVFRKYDPGNLLLGQAEREVLMQEL 782 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 D L + RL + + PSP A L+ ++ E + S LA+R A +L+ Sbjct: 783 DAHRLATTLARLASMRLDLHV--LERPSPLAFPLIVEFLREKL--STEKLADRIARMLA 837 >UniRef50_C6Y055 DEAD/H associated domain protein n=7 Tax=Bacteroidetes RepID=C6Y055_PEDHD Length = 840 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 199/891 (22%), Positives = 342/891 (38%), Gaps = 92/891 (10%) Query: 19 TRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL-YALDRLFREGGEDT 77 W K+P Q W A LV APTG GKT + FL +D L G + Sbjct: 12 VIKWLKSNRKKPFKFQTDAWQYYAEGYSGLVNAPTGFGKTFSIFLAAVIDELNTRAGLEK 71 Query: 78 REAHKR------KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 R+A K+ ++++I+P+++L D+ R ++ + E++ +G+R Sbjct: 72 RQAKKKAMVKRTSGLKLMWITPLRSLAKDLARAMREVCMEL----------ELDWHIGVR 121 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAVAGSKRG 190 GDTP E+ K + P++LI TPES++L+L + ++ ++ DE H + GSKRG Sbjct: 122 NGDTPQNEKLKQKKAMPEVLIITPESIHLLLAQKNTHSYFDQLQCIVADEWHELLGSKRG 181 Query: 191 AHLALSLERLDALLHTS-----AQRIGLSATVRSASDVAAFLG--GDRPVTVVNPPAMRH 243 L + R+ LL + G+SAT+ + L D P T+V + Sbjct: 182 VMTELGISRIKGLLKERHPERLLRIWGISATIGNMEQAMEVLVPYPDVPKTIVKADLEKK 241 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 IR ++P G + + +L + + ++T++FTN+RG Sbjct: 242 IDIRSILP--------------DHIDLLPWAGHLGHKLAEKLLPIIYKSKTTLIFTNTRG 287 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 AE L A + HHGS+ E Sbjct: 288 QAELWYQTL-------------------------LALDENLAGLL----AIHHGSIDYEL 318 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R E AL SG L+ V++TSSL+LG+D VD V+Q+ +P VA LQR GR+GH Sbjct: 319 RNWIEDALHSGSLKAVISTSSLDLGVDFKPVDTVVQIGSPKGVARFLQRAGRSGHSPYET 378 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 S F P +LV++A I E +E+ P D L Q V A D + Sbjct: 379 STIYFLPTHALELVEAAAIKEAAKTQDIESREPVVMAFDTLIQYLVTLAVGDGFDEARLF 438 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 V+ + +L + + + ++ S K+ + +R A Sbjct: 439 FEVKETYAFSELLPQEWSWIMQFITTGGDSLTAYNEFSKVSLVDGLWKVESRQTAMR-HR 497 Query: 544 TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD 603 GTI M V G +G ++E + + TL + Sbjct: 498 LHIGTIVSDPMLKVKFITGGY------IGMIEESFIARMKPGSSFTLAGRVLEFIMVKEM 551 Query: 604 QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIA 663 V+V + + A P W G A L G L + + ++ + Sbjct: 552 TVVVRKSKVKRAITPSWMGGRISLTANL----GAILRKKYNETLYKTH------QDIELD 601 Query: 664 NIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHA 723 I L ++Q + VP ++E + G + + GR+VHE A IA R+ Sbjct: 602 FIFPLFQKQEKVS-HVPRDDEFLIELIATKDG-HHLFAYPFEGRQVHEIMAALIAYRLGK 659 Query: 724 LWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFREC 783 S+ +D G + LF P+ L + + ++ ++ + +FR+ Sbjct: 660 TTPISFSIAMNDYGFELLSEQPIPVEENDIKNLFSPKNLAEDIVASINATEMARRKFRDI 719 Query: 784 AARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDF-PVILETLRECLQDVYDLPALE 842 A + L+ PG + A+ + Y ++ + E + P L Sbjct: 720 ACISGLVFQGFPGKYIANKHLQSSAALFFNVFSDYDHHNLLLRQAYDEAFYQQIEEPRLA 779 Query: 843 RLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASV 893 ++R+ ++ ++ + T P + + + M S L++R + Sbjct: 780 AALQRIQNSKLIVTKPESYT--PLCFPIKVDSLRDSM--SSEELSQRIQRM 826 >UniRef50_A9A127 DEAD/DEAH box helicase domain protein n=2 Tax=Thaumarchaeota RepID=A9A127_NITMS Length = 913 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 206/872 (23%), Positives = 354/872 (40%), Gaps = 131/872 (15%) Query: 10 LLPDVFSPATRDWFLR-AFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 +L +P F F T +Q + + + + LVIAPTGSGKT + + Sbjct: 5 VLTKQMNPIPESLFENFGFSNLTEIQKKASPIILQKKDCLVIAPTGSGKTECSVIPIFSL 64 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L + K + LYI+P++AL DV R + + L + Sbjct: 65 L--------KNTKKPGKIKTLYITPLRALNRDVFRRITKY------------AHQSELSI 104 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGS 187 IR GDT ++R K+T NPPD+LITTPE+L ++LT + + +E +++DEVH + S Sbjct: 105 EIRHGDTTQKDRKKITENPPDVLITTPETLVILLTQVKYLDAFSELEWIVVDEVHELLSS 164 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQI 246 +RG L+LS+ERL+ +IGLSATV + + F+ G R ++ ++R + Sbjct: 165 ERGTQLSLSVERLEFNSELPLTKIGLSATVGNFEEAGKFVVGTKRKCEIIRDTSVRKYDV 224 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR---HRSTIVFTNSRG 303 + + D + I++ V ++FTN+RG Sbjct: 225 EVKYVDGTISD-----------------------VAEKIIEHVSNLNLDSPVLLFTNTRG 261 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 +E L + L E +S HHGS+SKE Sbjct: 262 ESEFLASILKE------------------------------KSIIP--IELHHGSLSKEV 289 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGV 423 R TEQ L+ G+ VV TSSLELG+D+G+V+LVI +P V+ +QRIGR+ H Sbjct: 290 REETEQNLREGKRGIVVCTSSLELGLDIGSVELVIHYGSPRQVSKLVQRIGRSRHNRNAS 349 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEW 482 +KGL D ++ I++ + G +E LDVLA V + +D+ Sbjct: 350 AKGLIITNNSDDEFEAQAILQRIQEGSIEEQKIHDGSLDVLAHHLVGLTMQIGEISIDKA 409 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + +++A P+++L LD+L Y + ++R + + Sbjct: 410 FDLIKKAYPFRNLKLEELVDVLDLLDSNY----------LIFFDRTKMTFWKKGRSFKYY 459 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES-RVNDIITLGATSWRIQQIT 601 + TIPD + V + G + +G LD+ V + +I L + WRI + Sbjct: 460 FENLSTIPDILKFKVF-----DSVGKKIIGTLDQRFVGDYGDSGNIFVLKGSQWRILNVD 514 Query: 602 RD--QVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 V V P G +P+W GE + +G+F + +G+ Sbjct: 515 EKSFTVNVEPFRGGGITVPYWEGENIPIDYKTARKVGNFRSKVRNGSL------------ 562 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + EQ N + ++V+E R + I++HS +G +++ + ++ Sbjct: 563 ----QLTNKTIEQLNFNE-ISEENNVVVESNRSQG---SIVIHSCFGTKINSTLSTLLSS 614 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + ++ G+ + IV + I L + L +V ++ + R Sbjct: 615 MLSSMLGSVVDSRSDGYRIVLSSRSRISEKLFLEI-LKDDYDLFSMVTASLAGTHNVNWR 673 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 A + ++ R + Y ++ E LRE D YDL Sbjct: 674 TWCVAKKFGIVGRGAVYERKSARFLY----------ERYAKTALVQEALRELFHDKYDLK 723 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 ++L++ + +I + + S A +L Sbjct: 724 NTDKLLKEIRDDQIHVKWLEVDQFSKLAEPIL 755 >UniRef50_A8A8X3 DEAD/DEAH box helicase domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8X3_IGNH4 Length = 943 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 222/927 (23%), Positives = 366/927 (39%), Gaps = 137/927 (14%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLA 60 M + + LLP ++ R +K T VQ + + ++ L++APTG GKT A Sbjct: 1 MGVSAVEADLLPPRLVELIKE---RGWKDLTEVQKKAFKPITEGKNVLIVAPTGYGKTEA 57 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A L ++ E E +LYI+P+K+L D++ ++ Sbjct: 58 AMLPIFAKMIEERPEP---------LSVLYITPLKSLINDLKNRIE------------WW 96 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPE--SLYLMLTSRARETLRGVETVII 178 + V + GD A ERS + P IL+TTPE + L S+ R+ + V V++ Sbjct: 97 AERLGFVVARKHGDVGASERSLRLKRTPHILLTTPEGFKIDLDWASQFRKYYKNVRWVVV 156 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 DE H + GSKRG L+L LERL A QRI LSATV A L G Sbjct: 157 DEAHELVGSKRGVQLSLLLERLKAYSGRDYQRIALSATVGDPEATAKLLFG--------- 207 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + R +I V ++ V E E S W IL+ V T+VF Sbjct: 208 SSSREKEIVKVNVKRKIELVVDSIGEARE------EDSFWKASAKKILEHVEP--PTLVF 259 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 N+R AE+L + + HH S Sbjct: 260 VNTRYAAERL--------------------------------HEELSKIEGLKVEVHHSS 287 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH 418 +SKE R E+ LK G+L V+AT +LELGID+ ++ VI P SVAS LQR+GRAGH Sbjct: 288 ISKEIRQEIEKNLKDGKLDVVIATKTLELGIDISDLNKVILFKPPGSVASLLQRVGRAGH 347 Query: 419 QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDAL 477 ++GGVS+G+ + +D G +E P PLDVLA++ + L Sbjct: 348 KLGGVSRGVIITTDEIEALDGYTEAVLAVKGIVEPPKVPDAPLDVLAREIIGMTLQEKRL 407 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDML-SGRYPSGDFSAFR-PKLVWNRETGILTAR 535 Y V+ A P+++L + FD +++L + + D + + + + + Sbjct: 408 DPSWAYEVVKGAYPYRNLTKETFDELINVLVKNKILAWDGDKLKVSYMFYKLWSFDGGEK 467 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATS 594 I +R ++ V K G++ VG+LD VY+ R I LG + Sbjct: 468 KRWSRSFGEFFSVISERDVFVV-------KWGNKVVGDLDAFYVYKYLRPESKIRLGGKT 520 Query: 595 WRIQQITR--DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTI 652 W++ I +V V PA + +P W+GE R + + E L Sbjct: 521 WKVIGIDDEGMKVYVEPATDQMGEIPLWKGEEFHRSSLIPEYAKRVLEE--------EKP 572 Query: 653 PPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEP 712 + ++ + E + +PG LE+ G + +L +R+ E Sbjct: 573 KEVKLLPDAEKKVRKVFESYKRKNIDLPGGDVYYLEKVP---GGY--VLTGFMDQRLAEA 627 Query: 713 WAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGS 772 A I ++ + + SV +S GI + + P + E + + +R+A+ Sbjct: 628 LAHLIMYKVSSEYTTAVSVRSSFTGIAVTVDGGEAPNPIKLLK--EIDDVEDAIRKAMER 685 Query: 773 SALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECL 832 S +E + TP D V E +++ + Sbjct: 686 SPYLVQTAKEIQLSFGKLGKVTP-----------------------DDGLVFEEAVKQAI 722 Query: 833 QDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL-----------FGYVAEFMYQ 881 + D+ ++ + L +I++ + + +P A ++ + + Sbjct: 723 EKYIDVEKAKKFIEMLKEKKIKVKLIKAKSLTPLAAHVMSLPAFRPWLKIIEARIVSLLK 782 Query: 882 SDAPLAERRASVLSLDSELLRNLLGQV 908 +A AE A++L L + N L ++ Sbjct: 783 GEAFTAEELATMLDLSPTTVENKLKEM 809 >UniRef50_Q167Y6 ATP-dependent helicase, DEAD/DEAH box family n=28 Tax=Alphaproteobacteria RepID=Q167Y6_ROSDO Length = 817 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 223/861 (25%), Positives = 340/861 (39%), Gaps = 100/861 (11%) Query: 21 DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREA 80 DWF Q Q A L+IAPTG GKTLA FL L L Sbjct: 10 DWFASKGWQIHPHQLDMLARAHDPA-LLLIAPTGGGKTLAGFLPTLIDLA---------T 59 Query: 81 HKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQER 140 R LYISP+KAL D++RNL P+ + ++ +RV RTGDT A + Sbjct: 60 APRDGLHTLYISPLKALAADIKRNLTTPVTEM----------DLPIRVEDRTGDTSAARK 109 Query: 141 SKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLER 199 + +PP IL+TTPESL L+ A +G+ V++DE+HA+A SKRG L L+L R Sbjct: 110 KRQRADPPHILLTTPESLALLTSYEDAPRMFKGLRRVVVDEIHALAESKRGDQLMLALAR 169 Query: 200 LDALLHTSAQRIGLSATVRSASDVAAFLG-GDRPVTVVNPPAMRHPQIRIVVPVANMDDV 258 L L +R+GLSATV +A L P ++ P I ++ Sbjct: 170 LQRLC-PDLRRVGLSATVDDPQAIARLLAKHPDPCEILQADPGPAPDISML--------- 219 Query: 259 SSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAA 318 G Y +L+++ H++T++F N+R AE L Sbjct: 220 -------TTPKAPPWAGGNAAYAIPAVLEQIKAHQTTLIFHNTRAQAEIFFHNL------ 266 Query: 319 RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + + + HHGS+ ++QR E A+ G+LR Sbjct: 267 ------------------------WLANEEGLPIGIHHGSLDRQQREKVEAAMVRGDLRA 302 Query: 379 VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD 438 +V T SL+LGID G VDLVIQ+ P +V +QRIGRA H+ SK L P R ++V+ Sbjct: 303 IVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEVVE 362 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 ++ ++AG+L+ P DVL Q + A D Y V + DL R Sbjct: 363 CHAALDAVYAGQLDGEPRGRGPRDVLCQHILITACAGPFDADALYGEVITVGAYADLTRA 422 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVL 558 FD L + + +L+ N + P A + GTI D V Sbjct: 423 EFDECLTFCATGGYALRAYDQWQRLMQNADGLWHLRDPRAAQKIRMNIGTIQDTDTLKVR 482 Query: 559 LPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 L G + +GE++E D +G R + + V V+ + ++ Sbjct: 483 LQR---SRGGKPLGEIEEGFAATLTPGDTFLIGGQIVRYEGLREMTVEVSRNAAKKPKVA 539 Query: 619 FWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGI 678 + G +L + + + WLA + + + Sbjct: 540 TFLGTKFATSTQLSARVVEIF-QDTAWPYLPAHTADWLALQRERSQL------------- 585 Query: 679 VPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDG- 737 P L++E G + +++ GR + + + R+ + VA+D Sbjct: 586 -PAPGRLLIESFAH-DGRAQTVVYGFAGRNGQQTLGLLLTKRMEEMGLDPLGFVATDYAT 643 Query: 738 -IVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPG 796 I P TD LF+ E L + + +A+ FR A A L+ TP Sbjct: 644 LIWGLQPVTDPAP------LFDLEALETGLETWLAGNAVMKRTFRASATIAGLIQRNTPS 697 Query: 797 HRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQI 855 R Q + L + Q Y P+ ++ T E L+ + D + + R+ G +I Sbjct: 698 ARKTGRQATFSSDILYDTLQKYDPEHLLLDVTREEALRGLVDFGRIREMAERVAG---RI 754 Query: 856 SDVTTTTPSPFATSLLFGYVA 876 VT SP A +L Sbjct: 755 DHVTLPRVSPLAAPMLLEMGR 775 >UniRef50_C5CN99 DEAD/H associated domain protein n=9 Tax=Proteobacteria RepID=C5CN99_VARPS Length = 952 Score = 547 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 227/888 (25%), Positives = 354/888 (39%), Gaps = 80/888 (9%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 A WF +P Q W A L+ A TG+GKT A +L AL + Sbjct: 85 ALDAWFAARGWKPFKFQRDVWKAVAAGRSGLLHATTGAGKTYAVWLGALQAFSSAAPPPS 144 Query: 78 REAH--KRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 R A +L+I+P++AL D R LQ PL+ + +G G R+GDT Sbjct: 145 RSARATPPPPLTVLWITPMRALAADTLRALQQPLEAM----DAQGIDLHRWSAGARSGDT 200 Query: 136 PAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 + ERS P +L+TTPESL L+L + A E L V V++DE H + G+KRG + Sbjct: 201 SSAERSAQNERLPTVLVTTPESLSLLLARADASEVLGRVRMVVVDEWHELLGNKRGVQVQ 260 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 L+L RL + G+SAT+ + + L GD+ +V + + ++P Sbjct: 261 LALARLRR-WNAGLAVWGMSATLGNLQEAMHALLGDQEGVLVQGAVPKKLVVDSLLP--- 316 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 G G + + +LDE+ +T+VFTN+R +E + E Sbjct: 317 -----------GRAERFPWGGHLGLTMLPQVLDEIAASSTTLVFTNTRSQSEIWYQAMLE 365 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + + HHGS+ + R E LK+G Sbjct: 366 A-----------------------------RPEWAGLIALHHGSLDRAVREWVELGLKNG 396 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 EL+ VV TSSL+LG+D V+ V+Q+ +P VA LQR GR+GH G S+ P Sbjct: 397 ELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRITLVPTHSI 456 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 ++V+ A + AG +E P PLDVL Q V A D+ Y+ VR A + D Sbjct: 457 EMVEGAAARAAIAAGHIEARHTPVQPLDVLVQHLVTVALGGGFVPDDLYAEVRGTAAYAD 516 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 L R + L +S PS + V + E + GTI Sbjct: 517 LSRESWAWCLAFVSQGGPSLAAYPDYRRAVPDAEGVWRVPDARLARRHRMNIGTIVSDAS 576 Query: 555 YSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 +V G R+G ++E V + D G + +I V A G+ Sbjct: 577 MAVQYM------GGARIGSVEEGFVARMKPGDCFLFGGRLLELVRIHDMTAWVRRATGKR 630 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 A +P W G L + + L L G + S + ++ L+E Q+ Sbjct: 631 AAVPRWNGGRMPLSTTLADAVVQQLALAGAGRYNSPELQ----------CVRPLLEIQQQ 680 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 + +P L+ E G + L+ GR VH A +A R+ S+ + Sbjct: 681 WS-ALPTPETLLAETLATREGS-HLFLYPFAGRHVHMGLASLLAWRVAQHEARTFSIAVN 738 Query: 735 DDGIVAR--IPDTDGKLPDAAIFLFEPEKLLQIVREAVGSS----ALFAARFRECAARAL 788 D G P L + L + E + V +S L RFRE A + Sbjct: 739 DYGFELLSATPVDWPALLPQVLRLPQGEDAHATLLHEVLASLNAGELAQRRFREIARVSG 798 Query: 789 LMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRR 847 L+ PG + Q + +S E+ + Y P ++L+ +E L ++ L + R Sbjct: 799 LIFQGYPGEKRSSRQLQASSSLFWEVFRKYDPANKLLLQAEQELLAQELEIGRLAASLAR 858 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLS 895 + + + P+PF+ L+ E + + A+R A ++ Sbjct: 859 MATQQ--LVLKPLERPTPFSFPLMVELFREKLSNENV--ADRIARMVE 902 >UniRef50_Q0BTQ2 ATP-dependent helicase n=27 Tax=Alphaproteobacteria RepID=Q0BTQ2_GRABC Length = 855 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 233/870 (26%), Positives = 351/870 (40%), Gaps = 89/870 (10%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 P WF R Q A AL+IAPTG GKTLA FL +L L R+ Sbjct: 6 LPPRFAAWFERRGWTLRRHQAAMLDAAEADRSALLIAPTGGGKTLAGFLPSLISLARQAE 65 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 + + LY+SP+KAL TD+ RNL P++ + + +R+ RTGD Sbjct: 66 LPKG---QPEGLHTLYVSPLKALATDIARNLTSPVQEMG----------LPIRIETRTGD 112 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAVAGSKRGAHL 193 TP+ R++ PP IL+TTPESL L+L+ +G+ TVIIDEVHA+AG+KRG L Sbjct: 113 TPSGRRARQRETPPHILLTTPESLSLLLSLEDAPTFFQGLRTVIIDEVHALAGTKRGDQL 172 Query: 194 ALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 AL L RL L+ + GLSAT + ++GGD V+ P++ +++P Sbjct: 173 ALCLARLRRLV-PGLRMSGLSATAAHPQALRDYIGGD--AIVIEEAGGAPPRLEMMLPSG 229 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 G + IL+ + TIVF N+R AE L L Sbjct: 230 ----------------RLPWSGHMGLAAAPAILERIKAAAMTIVFVNTRAQAELLFQALW 273 Query: 314 ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 L L HHGS+ EQR EQA+ S Sbjct: 274 RLNEETLP------------------------------IALHHGSLELEQRERVEQAMAS 303 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR 433 G LR VVATSSL+LGID G VD V+Q+ P V+ LQR+GRA H++ S + P R Sbjct: 304 GLLRAVVATSSLDLGIDWGGVDQVLQIGAPKGVSRLLQRVGRASHRMDEASNAILVPANR 363 Query: 434 RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 ++++ + + A L+ P LDVLAQ + A D + VR+AAP++ Sbjct: 364 FEVLECEAAIMGVSARELDGDPPGPGGLDVLAQHLLGMACSAPFHPDTMFEEVRQAAPYR 423 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 L R+ FD TL + + +L + E + + GTI Sbjct: 424 MLDRKDFDDTLGFVETGGYTLSHYEQWHRLFRDSEGLLHVRSDRVARQWRMNIGTIVQSP 483 Query: 554 MYSVLLPEGEEK---AGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 M V L K +GE++E + R D G R Q+ + Sbjct: 484 MIKVRLRGNRGKRAEGRGSTLGEVEEYFASQLRPGDTFMFGGRLLRFVQLHDTVLEADEG 543 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE 670 +P + G L + L + WL Sbjct: 544 GDGDPMVPAYAGARLPLTTSLANRVRGMLQDRQGWQHLPDPVREWL-------------- 589 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 E++ +PG L++E W ++ + GR H+ + + R+ L Sbjct: 590 EKQRIRSRLPGRNDLLIETF-PRGDRWYMVAYCFEGRNAHQTLGMLVTKRMERLGMIPLG 648 Query: 731 VVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 VA+D + + P LFE + L + + S++ FR A + L+ Sbjct: 649 FVATDY----VMATWSARQPTGLDRLFEEDILGDDLEAWMAESSMLRRIFRHVAVVSGLI 704 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLN 849 + PG + Q + + ++ + + PD ++ T + + D+ L L+RR Sbjct: 705 ERQQPGLKRSRRQVTINTDLIYDVLRRHQPDHILLRATRADAASGLTDIGRLALLLRRAR 764 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYVAEFM 879 G I + + SP A +L E + Sbjct: 765 G---HIRHMALSRVSPLAVPVLLEIGRESV 791 >UniRef50_D0DB43 Dead/H associated domain protein n=4 Tax=Alphaproteobacteria RepID=D0DB43_9RHOB Length = 913 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 224/873 (25%), Positives = 342/873 (39%), Gaps = 99/873 (11%) Query: 6 DPSSLLPD--VFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFL 63 + + PD + WF R Q Q A L+IAPTG GKTLA FL Sbjct: 100 SCAPIFPDMRALPTPLQGWFDRRGWQIHPHQSAMLERADA-PCLLLIAPTGGGKTLAGFL 158 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L L R LY+SP+KAL D++RNL IP++ Sbjct: 159 PTLAEL---------TEAPRSGLHTLYVSPLKALAADIRRNLLIPIEE----------AG 199 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVH 182 + +RV RTGDTPA + + +PP IL+TTPESL L+ A G++ V++DE+H Sbjct: 200 LPIRVEDRTGDTPASRKKRQRADPPHILLTTPESLALLTSYEDAPRMFAGLQRVVVDEIH 259 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-GGDRPVTVVNPPAM 241 A+A SKRG L L+L RL + +R+GLSATV +A L P +V Sbjct: 260 ALAESKRGDQLMLALARLQGMC-PDLRRVGLSATVEDPQTIARLLARHPDPCEIVEADPG 318 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P I ++V ++ G Y +L++V +HR+T++F N+ Sbjct: 319 PEPDISMLV----------------TEAAPPWSGGGAAYSIPAVLEQVKQHRTTLIFHNT 362 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R AE L + + D HHGS+ + Sbjct: 363 RAQAEIFFHNL------------------------------WLANEDALPIGIHHGSLDR 392 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG 421 QR E A+ GELR +V T SL+LGID G VDLVIQ+ P +V +QRIGRA H+ Sbjct: 393 GQREKVEAAMVRGELRAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYN 452 Query: 422 GVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDE 481 SK L P R ++V+ +E + L+ P DVL Q + AA D Sbjct: 453 APSKALLVPANRFEVVECLAALEAVKEHDLDGEWRGRGPRDVLCQHILIAACAGPFGADA 512 Query: 482 WYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 Y+ + +A + DL R FDA L + + +L+ + P + Sbjct: 513 LYAEMTQAGAYADLTRAEFDACLAFCATGGYALRAYDRWQRLLQRPDGLWQLRDPRSAAR 572 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQIT 601 + GTI D V G +GE++E D +G R + + Sbjct: 573 IRQNIGTIQDTDTLKVRWRG----RGGAPLGEIEEGFATSLSKGDTFLIGGQIVRYEGLR 628 Query: 602 RDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENT 661 V VT + ++ + G +L I WLA + Sbjct: 629 EMVVEVTRDAAKKPKIATFMGTKFATSTQLSHRILRMFRQPG-WPGLPAHTAEWLALQRE 687 Query: 662 IANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRI 721 ++ + P L++E G +++ + GR + + + R+ Sbjct: 688 VSRL--------------PEPGRLLIESFPH-DGREQLVAYGFAGRNAMQTLGLLLTKRM 732 Query: 722 HALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFR 781 A V+SD ++ D LF+ KL + + +A+ FR Sbjct: 733 EEEGLAPMGFVSSDYAVLIWGLDAVTDPAP----LFDLAKLEAGLETWLQGNAVMKRTFR 788 Query: 782 ECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPA 840 A A L+ T G R Q + + L + Y PD ++ T E ++ + D Sbjct: 789 ASATIAGLIERNTAGQRKSGRQATMSSDILYDTLVKYDPDHILLQITREEAMRGMVDFSR 848 Query: 841 LERLMRRLNGGEIQISDVTTTTPSPFATSLLFG 873 + + R+ +I + SP + L Sbjct: 849 IREMCERVGD---RIDLLRLDRVSPLSAPLFLE 878 >UniRef50_Q6KZS3 ATP-dependent RNA helicase n=4 Tax=Thermoplasmatales RepID=Q6KZS3_PICTO Length = 901 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 215/979 (21%), Positives = 395/979 (40%), Gaps = 144/979 (14%) Query: 18 ATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 + + +PT VQ + + ++ L+I+PTGSGKT AA L L+ + RE Sbjct: 15 VLSAVYRQGIIEPTLVQSMAIPLILQGKNLLIISPTGSGKTEAAILPILNMISRE----- 69 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 + K +LY++P++AL D+ L + + V +R D Sbjct: 70 ----RPKPVSLLYVTPLRALNRDMLSRL------------FEYSRNLGINVQVRHSDINE 113 Query: 138 QERSKLTRNPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALS 196 ER ++ R+P DILITTPESL +ML RE + ++ ++IDEVH +A ++RG+ +++ Sbjct: 114 SERREIVRHPGDILITTPESLQIMLVNKNLREIISNIKYLVIDEVHEMAQNERGSQFSIA 173 Query: 197 LERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMD 256 LERL L + Q IGLSAT + ++A F+ D+ + +V P + +I + +P Sbjct: 174 LERLREL-NHGFQVIGLSATANNELELAEFIEPDKKIEIVKPEIRKSVEINVTLPEKASQ 232 Query: 257 DVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELY 316 ++S ++ +AG I+ I + ++VF N R +AE ++ R+ + Sbjct: 233 ELSDKMGC--DNQYAGSIKRIYNEINN-----ISGG--SLVFVNRRYVAEDMSFRIKLMD 283 Query: 317 AARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGEL 376 HHGS+S+E R E KSG+L Sbjct: 284 KNAR-------------------------------IEVHHGSLSRESRENAENDFKSGKL 312 Query: 377 RCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL 436 + ++ TSSLELGID+G +LV+Q +P + LQRIGR+GH + S+GL +L Sbjct: 313 KALICTSSLELGIDIGTAELVVQFNSPRQINKLLQRIGRSGHSLEKTSRGLVVCNDVIEL 372 Query: 437 VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAA-AMDALQVDEWYSRVRRAAPWKDL 495 ++ IV G+LE++ N L +A Q + + ++Y+ ++RA P+KDL Sbjct: 373 EEAMAIVGNALEGKLEDVLIRKNSLATVANQVMLELYFKKKMNYIDFYNLIKRAYPFKDL 432 Query: 496 PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMY 555 + + ++ L+ K++ + + + R + + IP +Y Sbjct: 433 SIDDYLSVINFLAS----------IKKIIIDGDN--IIKRYSILNYYINNISMIPSEKIY 480 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQVIVTPAPGRS 614 V+ ++ + +G LDE+ V E + ++WR +I ++++V P + Sbjct: 481 RVI-----DQTNKKFIGTLDEKYVVNEIEPGSYFVMKGSTWRTIRIDEEKILVEP-FNTA 534 Query: 615 ARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 A P W GE + F L + Sbjct: 535 AIAPHWTGEEIPVLYRAAARVSYNRKNHIIMDFLDDESKKHLIKWYEND----------- 583 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVAS 734 + ++++E II+ G + A + G + ++ G + S Sbjct: 584 ----LATDDNIIIE-----SQGNEIIIQVLLGTMGNFALAEILTGLLTSITGESVEMDYS 634 Query: 735 DDGIVARIPDTDGKLPDAAIFLFEPEKLL-QIVREAVGSSALFAARFRECAARALLMPGR 793 I R+ + I K + ++ + S F F A + ++ Sbjct: 635 PYHIYLRLNRSMSSQQIMDIIKNIDIKNIFGYIKASARRSRFFNTVFLYEARKFGVISND 694 Query: 794 TPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEI 853 R +L +I + Y + P+ +++R+ + D D+ L++ + +N Sbjct: 695 ADISRI----------RLEKIIESYINTPLYEDSIRKLVFDYMDIDILKKYLENINN--- 741 Query: 854 QISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLL-----GQV 908 + S + + + Y M PL + + S+ + LL + Sbjct: 742 -VKFTLKNNISESSKTFISHYSERIM-----PLKPTKVIIDSIKNRLLNEEIILLCTSCG 795 Query: 909 DPGEL----LDP-----------QVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTV 953 + L +D I + ++E+ + K + L++E G + V Sbjct: 796 NIRTLKVRNIDSVKCPACGSYLVAAISRFDKEMLSKNDEKTIKRIKKNAHLVKEKGIIAV 855 Query: 954 EDLAQRHTGSSEEVASYLE 972 +A R G E + LE Sbjct: 856 MAMAARGIGP-ETASRILE 873 >UniRef50_Q1CZG3 ATP-dependent helicase, DEAD/DEAH box family n=5 Tax=Bacteria RepID=Q1CZG3_MYXXD Length = 860 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 227/866 (26%), Positives = 350/866 (40%), Gaps = 87/866 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + R WF P Q + W AR E L+ PTG+GKT AA+L L + Sbjct: 51 EPPLERLRGWFRAKGWTPYPFQEEAWAAHARGESGLIHVPTGAGKTYAAYLGPLADVAAN 110 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 G + ++LY++P++A+ DV++ L+ PL + + ++ V RT Sbjct: 111 G---------QPGLQLLYVTPLRAVSRDVEKALREPLTVL----------DADITVESRT 151 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGA 191 GDT + R + P +LITTPESL ++LT RA E + +VI+DE H + GSKRG+ Sbjct: 152 GDTSSSVRQRQRERLPQVLITTPESLCVLLTHERAPELFASLRSVIVDEWHELLGSKRGS 211 Query: 192 HLALSLERLDALLHTSAQRIGLSATVRSASDVAA-FLGGDRPVTVVNPPAMRHPQIRIVV 250 L L+ RL + LSAT+ + + A +G + T+VN R + ++ Sbjct: 212 QLELAQARLRHFA-PGLRTWALSATLANLEEAARHAVGTGQTPTIVNAALERPVVVETLL 270 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P G + + + + RST++FTN+R AE+ Sbjct: 271 PE--------------SVDAFPWAGHLGFSMLARVGAWLDAERSTLIFTNTRSQAERWFE 316 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 L + + HHGS+ +E+R E Sbjct: 317 GLR-----------------------------FARPEWEHLIALHHGSIDREERERVESG 347 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFP 430 LK G LR VV TSSL+LG+D G V+ V+QV +P + +QR GR+ H+ G LF P Sbjct: 348 LKEGSLRIVVCTSSLDLGVDFGPVERVVQVGSPKGIGRTMQRAGRSAHRPGATCHILFVP 407 Query: 431 RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAA 490 +LV+ A + + +E TPP PLDVLAQ V A D VR AA Sbjct: 408 THALELVEMAAAKDALLRREVEARTPPDKPLDVLAQHLVTCALGGGFTPDALRDEVRTAA 467 Query: 491 PWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIP 550 + L F TL ++ P+ + V E + A + + GTI Sbjct: 468 AFAGLTDEEFAWTLSLVREGSPTLRAYPEFRR-VVEHEGRCVVADARVARMHRLNIGTIT 526 Query: 551 DRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 + + G R+G ++E V + D +I V PA Sbjct: 527 SDAVVQLRYWSGG------RLGSVEESYVSRLKPGDTFIFAGKKLEFSRIQDMTAYVRPA 580 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE 670 + + P W G L + L G S + + A + Sbjct: 581 KTKVTQTPRWGGSRLPLSGSLAAAVRRTLDTARHGDVTSDELAAAWPVLDAQARLSR--- 637 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 +P + L+ E C+ G + L+ GR VHE A +A R+ L A + Sbjct: 638 --------IPAADILLAETCQTRDG-HHLFLYPFEGRLVHEGLAALLALRLTRLRKATFT 688 Query: 731 VVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLM 790 + +D G+ P LF E+L V E+V L +FR+ A A L+ Sbjct: 689 LSVNDYGLELLTPTPFPFEEALHPALFTRERLEADVLESVNVGELSKRQFRDIARIAGLV 748 Query: 791 PGRTPGHRTPLWQQRLRASQLLEIAQGY-PDFPVILETLRECLQDVYDLPALERLMRRLN 849 PG R Q + AS L ++ Y PD ++++ RE L+ ++ LER + RL Sbjct: 749 LPGLPGARKSSRQVQASASLLHDVFIKYDPDNLLLVQARREVLEQQFEEGRLERTLERLQ 808 Query: 850 GGEIQISDVTTTTPSPFATSLLFGYV 875 ++ V P+P L+ + Sbjct: 809 AAPVERIHV--RRPTPLGFPLVVERI 832 >UniRef50_B6YUR4 Large helicase-related protein n=5 Tax=Euryarchaeota RepID=B6YUR4_THEON Length = 1389 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 170/692 (24%), Positives = 286/692 (41%), Gaps = 38/692 (5%) Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI------L 286 V V+ +R I N+ + +++G G I + L Sbjct: 718 VAVLGGDYLRTFGELIEPWRPNLRKIKGLSTGYSNRDVIPNLGKKLREIRETLGISSYRL 777 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYA----ARLQRSPSIAVDAAHFESTSGATSN 342 ++ + V +R ++ + RL + Y R + + + Sbjct: 778 QKMGIYNPMKVELGTREISRRNLVRLLDFYEMVAKEREMSDVLAEIQRLKELAEGDVFFD 837 Query: 343 RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT 402 R++S + + +G ++ E S +++SLELGID+G +DLVI + + Sbjct: 838 RIESIEPVFIKEAYGILNSETGNYVVNGFVSKN-----SSTSLELGIDIGTIDLVILIGS 892 Query: 403 PLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLD 462 P SV LQRIGRAGH++ VSKG+ R DLV+ V+ RL + P NPLD Sbjct: 893 PKSVNRALQRIGRAGHRLHDVSKGIILALDRDDLVEVTVLAHNARNRRLNRVRIPRNPLD 952 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 VL Q + A +VDE Y VRRA P+ DLP F + L L+G Y + K Sbjct: 953 VLVQHLLGMALNQVWEVDEAYKLVRRAYPFHDLPYEDFMSVLKYLAGEYAGLEEKKVYAK 1012 Query: 523 LVWNRETGILTARPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE 581 + E G R + + + GTIPD V + + +G ++EE Sbjct: 1013 IWL--EDGKFGRRGKMTRAIYYMNVGTIPDEAKIKVYTMD------KKLIGTVEEEFAER 1064 Query: 582 SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL 641 DI L ++ + +++ V P G +P W E +L + F Sbjct: 1065 LMPGDIFVLAGRTYEFIKSRGNKIYVIPREGAKPTIPAWFSEMLPLSFDLALDVQRFRRE 1124 Query: 642 ----LADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW 697 L + S + +E I EQ + ++P +++E E Sbjct: 1125 VKNLLDKESAKSLLTKKYGIDERAARAILSYFREQARYS-VIPDDSTVLVEEVLGEK-RN 1182 Query: 698 RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF 757 R H+ GRR ++ + A A + + + +D+G +P + LF Sbjct: 1183 RYFFHTLIGRRANDALSRAFAYIVSQWKNCNVGIAINDNGFALLLPPEKRLNEEEIRALF 1242 Query: 758 EPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQG 817 E L +++A+ ++ L RFR A R LL+ R G L +Q++ A LL++ + Sbjct: 1243 EIGDLRGTLKKALDNTELLKRRFRHVANRGLLILRRYIGRSKRLGRQQMMAVALLKVLKE 1302 Query: 818 -YPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVA 876 YPDFP++ E RE ++D D+ + E+ + + G++++ PSPFA +L Sbjct: 1303 NYPDFPLLKEVYREIMEDKMDVESAEQFLSWVRDGKVRVVIEHNELPSPFAFNL------ 1356 Query: 877 EFMYQSDAPLAE-RRASVLSLDSELLRNLLGQ 907 E + SD L E RR + L +++ + Sbjct: 1357 EVIGSSDVVLMEDRRELIKQLHRKIMAMIEAS 1388 Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats. Identities = 130/381 (34%), Positives = 191/381 (50%), Gaps = 42/381 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAA 61 A+ + ++ S R+WF R F T Q + E+ L+ +PTGSGKTL+A Sbjct: 9 AEREYADEEIFEILSEPVREWFKRKFGTFTPPQRYAVIEIHKGENVLISSPTGSGKTLSA 68 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 FL A++ L +E +LY+SP++AL D++RNL+ PL I + + G Sbjct: 69 FLAAINELI----LLGKEGKLDDKIYVLYVSPLRALNNDIKRNLEGPLAEIKEVAKELGY 124 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDE 180 +RVGIRT DT + E+SK+ R PP ILITTPESL + L + RE LR V+ +IIDE Sbjct: 125 ELPEIRVGIRTSDTSSYEKSKMVRKPPHILITTPESLAIALNAPKFRERLRTVKYLIIDE 184 Query: 181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 VHA+A +KRG+HLALS+ERL L + RIGLSAT+ +VA F V Sbjct: 185 VHALAENKRGSHLALSIERLANLAESEFVRIGLSATIHPLEEVAKF--------VFGFDD 236 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P+ ++V V+ + ED G++ + + + + HR+T++FTN Sbjct: 237 EGKPRPGLIVDVSFAKETRIWVESVVEDLIYTDAGTLSDALYKRLAELIREHRTTLIFTN 296 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 +R AE++ L + Y + +HH S+S Sbjct: 297 TRSGAERVAFNLKKRYPE-----------------------------FEGLIEAHHSSLS 327 Query: 361 KEQRAITEQALKSGELRCVVA 381 +E R E+ LK GEL+ VV Sbjct: 328 REVRLDVEEKLKRGELKAVVC 348 >UniRef50_Q9Y9V1 Putative ATP-dependent helicase n=1 Tax=Aeropyrum pernix RepID=Q9Y9V1_AERPE Length = 948 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 238/1055 (22%), Positives = 405/1055 (38%), Gaps = 157/1055 (14%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYAL 66 S +P R+ +K +Q + + + R +ALV+APTGSGKT A Sbjct: 2 EESAVPGWVLELLREA---GYKSLLPIQEKAFPIIYRGLNALVVAPTGSGKTEA------ 52 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 +++Y++P++AL D++ ++ Sbjct: 53 ALAPLLARLRNGRVASGGGVKVVYVTPLRALNRDLEGRVERL------------AGLFGY 100 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVA 185 V +R GDT R + PPDI+ITTPESL L+LT RA+E L+ V++DE+H + Sbjct: 101 TVQVRHGDTVQSSRRRFLERPPDIVITTPESLALLLTVKRAKEVLKQARAVVVDEIHELM 160 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVR--SASDVAAFLGGDRPVTVVNPPAMRH 243 SKRG L+L+LE+L+ + QRIGLSATV S A+ LG R V++V + + Sbjct: 161 ESKRGVELSLNLEKLELMAGRRLQRIGLSATVSRHSLYRAASLLGAGRHVSMVLDTSPKE 220 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL-RHRSTIVFTNSR 302 +R+VV G EG W I + V S ++F N+R Sbjct: 221 YDVRVVV--------------------VGDEGRFWENSVKAIAELVKGEGGSVLIFANTR 260 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 E L L+ +HHGS+S+ Sbjct: 261 STVETLAFALSRELGEE--------------------------------VPAHHGSLSRH 288 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGG 422 R E+ K G ++ +VATSSLELGID+G V LV+Q +P V + +QR GR+GH+ G Sbjct: 289 VRERVERDFKEGRVKAIVATSSLELGIDVGRVALVVQFLSPRQVTAMVQRAGRSGHRFGE 348 Query: 423 VSKGLFFPRTR-RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA-MDALQVD 480 S+ + ++++S VI G LE+++ P P D LA AA + ++ Sbjct: 349 RSRAVIVTIDNVFEVLESHVIAFRAMKGDLEDISIPKKPYDALAHFMAGAAIDSEPPTLE 408 Query: 481 EWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL 540 Y AP++DL + +LS +++ G L Sbjct: 409 GVYKLAVSTAPYEDLKMEEVEEIARVLSD-----------VRVIRLGPGGKLGRSSRTYS 457 Query: 541 LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM-------VYESRVNDIITLGAT 593 IPD + V + R VGE+ E + R I LG Sbjct: 458 YFYR-VSMIPDEKTFKVH-----DVVSGRDVGEVGERFIQLRLMKASDPRSKPYIVLGGK 511 Query: 594 SWRIQQ--ITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLH-LLADGAFFSG 650 W+I + I +V+V+P +P W GE ++ + + + D + Sbjct: 512 VWKILEVDIDAGKVLVSPEGEVEGAIPAWEGELIPVDFKVAREVCSIMSLAMNDMEAGAR 571 Query: 651 TIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVH 710 + +E + + ++ E G V R V+E + IL++ G R + Sbjct: 572 LLRARRLDEKAMERVLDVLGETGRLWGTVLSWRRPVVE-----EAEGLAILYACLGSRGN 626 Query: 711 EPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKL-----PDAAIFLFEPEKLLQI 765 ++ ++ + + + IV + P + G + EP + L + Sbjct: 627 FALSLLLSKLMEGSVAVEFHYI--PYAIVFKSPASRGLGRLVAHSLKTLAKLEPAERLGM 684 Query: 766 VREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVIL 825 + +AV S + RF + A R ++ L + ++A PV + Sbjct: 685 LYDAVRRSRAYLVRFYQVAKRMGVVDPDA----------TLSLDIIRKMADAMQGTPVDI 734 Query: 826 ETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAP 885 ET++E + + D+ AL R + ++ ++ V SP A L ++ Sbjct: 735 ETVKELVHEKLDIDALNRFLDDVSD----VAVVELQRLSPLARETL---TNPYL------ 781 Query: 886 LAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLL 945 R + +SL + L ++ + L + +++ L + E+ + +L Sbjct: 782 ---RVDAAVSLKTLGLDKII-EAKKRRLSEKRIV--------FLCISCDKRHEKKVAELP 829 Query: 946 RELGPMTV--EDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDA 1003 R LA +E E ++ + +++ ARL + Sbjct: 830 RGTAYRCPYCGSLALAPLPPTETGERLAEAYTRKRKGAKLSREEAKLAREVEERARLYIS 889 Query: 1004 LGVRLPES-LPEIYLHRVSYPLR-DLFLRYLRAHA 1036 L V + E + P R LR L+ + Sbjct: 890 LAVEGKARYIAEALSAQGVGPRRARSLLRELQLYG 924 >UniRef50_A1RYY4 DEAD/DEAH box helicase domain protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYY4_THEPD Length = 946 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 221/875 (25%), Positives = 343/875 (39%), Gaps = 122/875 (13%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDR 68 LLP A + +++ VQ ++ ++ + L+ APTG+GKT AA L L Sbjct: 22 DLLPGRILEALSRF---GYRELNYVQVKSLELSRVYPNMLISAPTGAGKTEAAVLPVLRD 78 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L +GG K LY++P++AL D+ + + + E Sbjct: 79 LVEKGG---------KPIYALYVTPLRALNRDIYDRMVELFRALGFEAE----------- 118 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGS 187 +R GDTP + R ++ +PP +LITTPE+ +L R RE L+ V++DEVH + Sbjct: 119 -VRHGDTPQRVRRRIAESPPHMLITTPETTQFLLVDGRYREHLKNTRWVVVDEVHELLDD 177 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 KRGA L+L+LERL L+ + +GLSAT+R L G R TVV + ++ Sbjct: 178 KRGAQLSLALERL-RLISPGLRVVGLSATLRDPEAALRLLSGGRVGTVVEWFERKAYELV 236 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + E AGR + R IVFTN+R AE Sbjct: 237 V-------------EDIDEEGDLAGRVKRVAELC---------RGGGVIVFTNTRDTAEF 274 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L Y R HHGS+S+++R Sbjct: 275 IGRVLARDYGLN--------------------------------VRVHHGSLSRQEREEA 302 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 E+ KSG + +VATSSLELG+D+G LV+Q +P QR+GRAGH + VS+G+ Sbjct: 303 ERLFKSGRVDAIVATSSLELGVDIGYARLVVQFGSPRQAIKLAQRVGRAGHSLSEVSRGV 362 Query: 428 FFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRV 486 P D V+SAV+ ++ LE PLDVL+ Q L V + V Sbjct: 363 IVPLYLEDAVESAVLARRVYLRALEKQGFHEKPLDVLSHQVAGLVLEYRDLDVYTVHEVV 422 Query: 487 RRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSG 546 R+AP++DL L+ L V + + S Sbjct: 423 TRSAPFRDLSLGELKQLLEFLDSLG------------VVRFDGERVKMGRRTISYYYGSA 470 Query: 547 GTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRD--Q 604 IP+ + V+ + A R +G LD +I LG +W ++++ D + Sbjct: 471 SMIPETLSFDVV-----DMASRRTIGALDYAFASLVDKGRVIILGGKAWTVEEVDVDANK 525 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHL----LADGAFFSGTIPPWLAEEN 660 V V P W G A++ +G L + + E Sbjct: 526 VYVVENVEEFGEPPIWTGMTLPVDAKVAREVGSLYRRIGESLGNPEELEKLRKEYAIPEK 585 Query: 661 TIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGR 720 + +IEE++ G+VP R+ V E G I LHS G + + A+ +A Sbjct: 586 AFEKLVRIIEEEKRLLGVVPSDRNAVAE-VASYKGKTAITLHSYLGTKGNNLLALLLAHA 644 Query: 721 IHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 + G+ A A ++ E L+ + E V S +A F Sbjct: 645 VRGYTGSSARYFADPYRVLVVTEYEVPDQRVLESLRSGLEWSLRNLEEVVRESNSYALAF 704 Query: 781 RECAARALLMPGRT----PGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVY 836 A++ ++ + PG + L + P+ E LR CL + + Sbjct: 705 SHVASKMGVVDVKKSKPEPGLMSSLR-------------KRMRGTPLDREALRTCLFEYF 751 Query: 837 DLPALERLMRRLNGGEIQISDVTTTTPSPFATSLL 871 DL A+E +R ++ G + SP A + Sbjct: 752 DLEAVEEFVREVSEGRRPLVFKRLPELSPLAQLIF 786 >UniRef50_A1TJ45 DEAD/H associated domain protein n=5 Tax=Comamonadaceae RepID=A1TJ45_ACIAC Length = 1014 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 219/975 (22%), Positives = 348/975 (35%), Gaps = 150/975 (15%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY 64 P SS P P W +P Q + W A+ L+ A TG+GKT A +L Sbjct: 2 PSSSSRAP-RARPLAEAWIAARGWRPFPFQREVWRALAQGRSGLLHATTGAGKTYAVWLG 60 Query: 65 ALDRLFREGGEDTR--------------------------EAHKRKTSRILYISPIKALG 98 AL G + +A + +L+++P++AL Sbjct: 61 ALQAFGTAGKARGKGEGGTSADLADALEAAAGRPADGRRHKAPPPEPLTVLWLTPMRALA 120 Query: 99 TDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESL 158 D + L+ PL +A + G RTGDT + ER +R P +L+TTPESL Sbjct: 121 ADTLKALRTPLDELAATQPALAR----WTSGARTGDTGSAERGAQSRRLPTVLVTTPESL 176 Query: 159 YLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATV 217 L+L + ARE L V V+ DE H + G+KRG + L+L RL + G+SAT+ Sbjct: 177 SLLLARADARELLSTVRLVVADEWHELLGNKRGVQVQLALARLAG-WNPRVCVWGMSATL 235 Query: 218 RSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277 + + L + Q+ + V + G + Sbjct: 236 GNLPEARDALLAPLGAEGAGEGVLVQGQVDKRLVVDTL--------LPDHPERFSWAGHL 287 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTS 337 + ++ E+ +T+VF N R AE + + Sbjct: 288 GLRMLPAVVRELESTTTTLVFVNVRSQAELWYKAILDA---------------------- 325 Query: 338 GATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV 397 + HHGS+ + R E LK G LR VV TSSL+LG+D V+ V Sbjct: 326 -------RPDWAGELAIHHGSLDRGVREWVEAGLKEGRLRAVVCTSSLDLGVDFLPVERV 378 Query: 398 IQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP 457 +Q+ + +A LQR GR+GH G S+ P +LV++A + AG +E P Sbjct: 379 LQIGSAKGIARLLQRAGRSGHAPGRPSRITLVPTHSLELVEAAAARAAVQAGEVEMRASP 438 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 P+DVL Q V A + + Y+ VRR ++DLPR V+ LD + PS Sbjct: 439 RRPVDVLVQHLVTVALGGGFEPEALYAEVRRTVAYRDLPRAVWQWCLDFVHRGGPSLAAY 498 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 ++ + E + GTI +V + G R+G ++E Sbjct: 499 PDYQRVAPDEEGIWRMPSARLARRHRANIGTIVSDASMAVQVLHGA------RLGTMEES 552 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 + D + +I V A +P W G L + + Sbjct: 553 FLSRLSPGDCFVFAGQVLEMVKIEDMTAYVRRAARGRPTVPRWAGSRMPLSTVLADFVVQ 612 Query: 638 FLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW 697 L A G + S + ++ L+E Q+ + +P L+ E R G W Sbjct: 613 QLAQAAAGRYGSPELR----------CVRPLLEVQQRWS-ALPTPGTLLAETLRTREG-W 660 Query: 698 RIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLF 757 + L+ GR H A A R S+ +D G+ + T+ L Sbjct: 661 HLFLYPFAGRHAHIGLASLFAWRAAQGEAGTFSIAVNDYGLEL-LSATERDWAALLPELL 719 Query: 758 EP----------------------------------------------------EKLLQI 765 ++ Sbjct: 720 RVHAAPVPEGGSDTGPPGLPAGEALAIRNTANAARAAAADSSGASVIGTGSAPQDEARHA 779 Query: 766 VRE----AVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYP-D 820 + ++ ++ + RFRE A A L+ PG R Q + + E+ + Y Sbjct: 780 LLHEVLASLNATEMARRRFREIARVAGLIFQSHPGERRSARQLQASSQLFFEVFRKYDAG 839 Query: 821 FPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMY 880 ++ + E L D+ L +RR+ + PSPFA L+ E + Sbjct: 840 NMLLRQADEEVLSQELDVAQLLAALRRMQAQ--ALVVQPLARPSPFAFPLMVERFREKLT 897 Query: 881 QSDAPLAERRASVLS 895 D LA+R A +L+ Sbjct: 898 NED--LADRIARMLA 910 >UniRef50_A4YHK3 DEAD/DEAH box helicase domain protein n=12 Tax=Sulfolobaceae RepID=A4YHK3_METS5 Length = 931 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 202/863 (23%), Positives = 354/863 (41%), Gaps = 142/863 (16%) Query: 24 LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKR 83 R + + T +Q R + L+IAPTG GKT AA L L + ++ Sbjct: 15 ERNWTKMTQIQEMAMEPILRGNNTLIIAPTGFGKTEAALLPILSLMSE---------GEQ 65 Query: 84 KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKL 143 K ++Y++P+KAL D+ + +++ V + G+ P +E++ Sbjct: 66 KPVSLIYVTPLKALINDITIRI------------DWWASKLGFVVSRKHGEVPQKEKNMR 113 Query: 144 TRNPPDILITTPESL--YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLD 201 R P IL+TTPE L + S+ R+ R V+ VIIDE+H + GSKRGA L + LERL Sbjct: 114 LRKAPHILVTTPEGLEIDMDWASKFRDNYRNVKWVIIDEIHELMGSKRGAQLFVLLERLK 173 Query: 202 ALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 QRIGLSAT+ + VA L G RP T+V A + +++I Sbjct: 174 DFSGKDFQRIGLSATISNEELVANTLFGSSSRPKTIVKSEAGKEFRLKI----------- 222 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 G +W I + + T+VFTNSR L E+L Sbjct: 223 ---------RSIKDSGDVWVASAKIIKESLEP--PTLVFTNSRFLTERL----------- 260 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 ++ HH S+S++ ++ E+ L+SG+ V Sbjct: 261 ---------------------HEELERLGEKGIFVHHSSISRDSKSNAEENLRSGKAGAV 299 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDS 439 + T +LELGID+G V +I P SVAS LQR+GR+GH VGG+ G D +++ Sbjct: 300 LCTKTLELGIDVGKVKKIIMYRPPPSVASFLQRLGRSGHCVGGIPYGEIICVQDFDCLEA 359 Query: 440 AVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRR 498 I G+LE PLDV+A++ + +++++ +S + + ++DL R Sbjct: 360 LAIYSLSRKGKLEPPR-RVRPLDVVAREILGMLLQYSSIKLERVFSIITASQVYRDLTRE 418 Query: 499 VFDATLDMLSGR---YPSGDFSAF----RPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 F + L GD +NR + A+ ++ I + Sbjct: 419 EFQNLISYLQRNNLVVVEGDELKLGKSFFKIWTFNRSNNFVWAKNFSE-----FFSLISN 473 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQITRDQVIV--T 608 +++ ++G + +GE+D VY+ R D+I + W++ +I ++V T Sbjct: 474 DDAFTL-------RSGEKIIGEIDAIYVYKHIRPGDLIRISGKLWKVARIHNGMMMVDLT 526 Query: 609 PAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGL 668 PA +P WRGEG + + I + + + +++ A+++ L Sbjct: 527 PADRGEGEIPIWRGEGVPKSQLIPREIQELFK------IGDKILESEILDDSAKASLKAL 580 Query: 669 IEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 +E+ + +P S + + + D + + RV A + + + + Sbjct: 581 MEKYVRSKLPLPSSSTIYM-----TVTDKETVYSTLIDERVANTIAHMLMYLASSKYTLN 635 Query: 729 ASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARAL 788 AS G I D D + + E++ +I+ ++ S LF + +E A Sbjct: 636 VYTRASIYGFSINITDRD---LLRELVQMKEERIRKILFRSILRSPLFMSVEKEIQASFG 692 Query: 789 LMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRL 848 + P D +I E LR+ ++ +++ ++R+ Sbjct: 693 KIGKINPK----------------------EDKLIIKEGLRQTVKRYFNIKGTLTTLKRI 730 Query: 849 NGGEIQISDVTTTTPSPFATSLL 871 G+I+I +P ++L Sbjct: 731 REGKIRIVRSEL---TPLGEAVL 750 >UniRef50_A3DN94 DEAD/DEAH box helicase domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DN94_STAMF Length = 934 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 184/882 (20%), Positives = 358/882 (40%), Gaps = 118/882 (13%) Query: 26 AFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +K+ T++Q + + + ++ +++APTGSGKT AA L + ++ + G K Sbjct: 12 GYKKLTSLQIKAFKAIYKEKNSVIIVAPTGSGKTEAALLPIMYKINKHGY---------K 62 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+P++AL D++R ++ + + +R GDTP + R + Sbjct: 63 PISAIYITPLRALNRDIKRRMEKL------------AKCFGVSINLRHGDTPYKLRKYIE 110 Query: 145 RNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 NPP IL+TTPE+ +++ + R+ + ++ ++IDE + SKRG L S+ L+ Sbjct: 111 TNPPHILVTTPETFNYILINDKMRKYIANLKYIVIDEFRDLIESKRGILLLTSIYLLEHY 170 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGG---DRPVTVVNPPAMRHPQIRIVVP-VANMDDVS 259 L +I L+AT+++ L + V+ ++ +++VVP + D+ Sbjct: 171 LKHKFIKIALTATLKNIRLAMEILSSSALPSNIDVLIDNTLKPIDVKVVVPECKDNDNKC 230 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 S ED I D RS +VF N+R +AEKL L Sbjct: 231 KFLSSILEDKDLIAR-------ILRIYDLFRSKRSILVFVNTRSIAEKLGYLLK------ 277 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 + ++ ++++ HHGS+S+ R E+ ++G L+ + Sbjct: 278 -------------------VVNEKLGANNIH-VEVHHGSLSRNHRLKVEEDFRNGRLKGL 317 Query: 380 VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG-LFFPRTRRDLVD 438 +ATSS+ELGID+G +D VIQ +P V +QRIGR+GH++ G+S+G + +++ Sbjct: 318 IATSSMELGIDVGFIDYVIQYMSPRQVVRLVQRIGRSGHKLSGISRGEIIVQNNTLQILE 377 Query: 439 SAVIVECMFAGRLENLTPPHNPLDVLA-QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 S VI G +E P PLDVLA + + + + + + YS + ++DL Sbjct: 378 SLVIARRAINGDIEEERIPVKPLDVLAYSIVLYSLITEGINIYDLYSLLIMNPIYRDLDV 437 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 + F+ ++ L +L+ +E I+ ++L + IP + Sbjct: 438 KEFNDLIEYLK-----------YARLIKVKE-NIIKPTSRSRLFIYKT-TMIPSTKDVII 484 Query: 558 LLPEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQVIVTPAP---GR 613 + RR+G L+EE V D++ +G W++ + + P Sbjct: 485 INV-----VDDRRIGVLNEEYVVLNISEGDVVVVGGKPWKVIGYDQQNAKLYVEPYNVSE 539 Query: 614 SARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQR 673 + +P W GE +L +G + ++ L + + I Sbjct: 540 NIIIPHWEGENIPVEYKLAREVGSLIRRISLNMKIDDYKTLLLNDNIKLEGIND------ 593 Query: 674 NATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA-DASVV 732 + + +++E E+G +I++ G RV+ + I + + Sbjct: 594 -----LADDKTIIIEG-NIELG--LVIVNINGGSRVNRFMRDLLKSVIQWRYPFLKINAY 645 Query: 733 ASDDGIVARIPDTDGKLP-----DAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 ++ + + + + + + ++ R + A R Sbjct: 646 STPYAVFITLNNKQYVREVVNTIEQVMHNINRYLTRKSLKRIAVEQGTMHWRIFQVAQRF 705 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 + + ++ + L + + D + E L E L YD+ ++++L Sbjct: 706 GALD---------PEKNKITKAML----EAFVDTVIGYEALNEVLWKDYDIESIKQLADL 752 Query: 848 LNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAER 889 + G ++I T+ + L+ Y E A LA R Sbjct: 753 VMNGNVKIISKITSKLTNGGRQLI-TYYGEVRTVMPASLAGR 793 >UniRef50_B8D5X5 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5X5_DESK1 Length = 932 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 208/851 (24%), Positives = 340/851 (39%), Gaps = 122/851 (14%) Query: 26 AFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 +K T +Q + + A L++APTGSGKT AA + R+ + K Sbjct: 12 GYKSFTELQKKAFDKVAGEGRSVLILAPTGSGKTEAAVIPVFYRV---------RIERLK 62 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+P++AL D++R ++ + L V +R GDTP + R +L Sbjct: 63 PIAAIYITPLRALNRDIERRIKKI------------ASCFGLSVAVRHGDTPERARRELA 110 Query: 145 RNPPDILITTPESL-YLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 NPP +LITTPES Y+++ + R + +IIDE H + SKRG L L Sbjct: 111 DNPPHVLITTPESFAYIIVNEKLRHYIANTRYLIIDEFHEMVRSKRGLLFLTMLYLLGEY 170 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGG-DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 RI LSAT+ + S+ L V V+ ++ +++V+P S Sbjct: 171 HGFKPLRIALSATLSNPSEYLKLLTPTGEDVEVIGDEYVKKMDVKVVIPGKP-----SSL 225 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 S G+DS R ILD R+ +VFTN+R LAE L + L +L Sbjct: 226 SLLGDDSVDPRLSY--------ILDAGRRYNGVLVFTNTRSLAEMLGSLLRKLIEKHG-- 275 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 HHGS+S+ R E K GEL +VAT Sbjct: 276 -------------------------LDLKVGVHHGSLSRSHREEVEAGFKQGELNILVAT 310 Query: 383 SSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFF-PRTRRDLVDSAV 441 SS+ELGID+G +D VIQ +P + +QRIGR+GH++ G+S+G+ L++S + Sbjct: 311 SSMELGIDIGHIDFVIQYLSPRQSSRLIQRIGRSGHRLKGISRGVVLSTSNLLHLLESLI 370 Query: 442 IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA--LQVDEWYSRVRRAAPWKDLPRRV 499 +V+ ++E PLDVLA ++ + DE Y R+ R A ++DL Sbjct: 371 LVDEALRSKVEREEVVFKPLDVLAYAIALLVLLNPSGVNRDELYDRLVRYALYRDLSPEE 430 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLL 559 ++ ++ + + V + G+L +L + IP V+ Sbjct: 431 YNGLIEYMVYAH------------VLRDDGGLLKPTRKTRLYVYRT-SMIPSTRDIHVV- 476 Query: 560 PEGEEKAGSRRVGELDEEMVY-ESRVNDIITLGATSWRIQQITRDQ--VIVTPAPGRSAR 616 E + + +G L+EE V R +D+I L +WR+ ++ + V G A Sbjct: 477 ----EVSTGKTIGSLNEEYVILRLRPDDVIILAGEAWRVIGFDDEKGHLYVEKTKGDYAE 532 Query: 617 --LPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRN 674 +P W GE + IG+ + + + L I+ GL EE Sbjct: 533 SLIPHWEGENIPVDTRVALRIGEVIDYVKKNKSLPEELKKLLETNVEIS--WGLAEELSG 590 Query: 675 ATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGA-DASVVA 733 + + ++ +I++ G +V+ I + + D + + Sbjct: 591 YS-------RIYVDYV---EKMNLLIININAGSKVNSLIRDVITYLLRQRFPIMDFTSYS 640 Query: 734 SDDGIVARI------PDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARA 787 S I+ R+ + + I L + +R V S R + A R Sbjct: 641 SPYAILVRVKGYIYPAELINAVKTIIINLGKYIDNNAFLRSVVKDSQALYWRIYQVAQRF 700 Query: 788 LLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRR 847 + + R+ S L +A D + E +E L YDL + + Sbjct: 701 GAI---------TPGETRVTKSMLNALA----DTIIGEEAFKEVLIKDYDLESARSIASL 747 Query: 848 LNGGEIQISDV 858 + GG I + Sbjct: 748 ITGGGISVETR 758 >UniRef50_Q74ZT5 AGR113Wp n=3 Tax=cellular organisms RepID=Q74ZT5_ASHGO Length = 2154 Score = 480 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 124/581 (21%), Positives = 220/581 (37%), Gaps = 64/581 (11%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQ-----PTAVQPQTWHVAARS-EHALVIAPTG 54 + P P P V + DW ++F +Q + + +A + ++ L+ APTG Sbjct: 468 IPAPPKPVDNFPLVSISSLVDWAQKSFPTAETKTLNRIQSEVYPIAFGTDKNMLLCAPTG 527 Query: 55 SGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD 114 +GKT A L L RL + + ++ +++YI+P+KAL + R Q L Sbjct: 528 AGKTNVAVLAIL-RLLSKYYKAETKSFNTSKFKVVYIAPLKALVQEQVREFQRRL----- 581 Query: 115 ERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGV 173 + L+V TGD ++ IL++TPE ++ + R + V Sbjct: 582 -------QQYGLKVAELTGD---SNLTRQQIMEAQILVSTPEKWDVITRNGLNRHYTKLV 631 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 + +IIDEVH + +RG + + RL+ T + + LSAT+ + +D+A FL Sbjct: 632 QLLIIDEVHLLHD-ERGPVIESIVARLETQGSTETRVVALSATLPNYTDIAEFLRVPSDG 690 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 + R ++ G E + R ++ +L+ V + Sbjct: 691 LFYFDASFRP------------CPLAQQFCGITETNSVKRVNAMNQVCYEKVLESVAENH 738 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDV 349 IVF +SR + L + + S DA E T T Sbjct: 739 QVIVFVHSRKDTARTAIWLRDKLLEEDKISSFAPQDAGSAEILKRETENITDKSFGDVVQ 798 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV---ATP--- 403 HH +S++ R++ E G ++ +V+TS+L G+++ A ++I+ +P Sbjct: 799 HGFGIHHAGLSRDDRSLAEDLFADGLIKVLVSTSTLAWGVNLPAHTVIIKGTEMYSPQKG 858 Query: 404 ----LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLEN 453 LS LQ +GRAG + +G+ +++ + +E F + Sbjct: 859 SWVSLSSQEVLQMLGRAGRPRYDTFGEGIIITNQSNIHYFLAILNQQLPIESQF---ISK 915 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR-VFDATLDMLSGRYP 512 L N VL +D L Y R+ + + DA L R Sbjct: 916 LPDNANAEIVLGTVKNRIDIVDWLGNTYLYVRMLKDPKLYKVADEIETDAALLSYRERLA 975 Query: 513 SGDFSAFRP--KLVWNRETGILTARPGAQLL--AVTSGGTI 549 +V+N TG + + ++ S TI Sbjct: 976 HAALRLLHENNLIVYNPVTGDVQSTDLGRIASQYYISYTTI 1016 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 88/565 (15%), Positives = 174/565 (30%), Gaps = 81/565 (14%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREG 73 P F FK Q ++ + E+ + A GSGKT A L L Sbjct: 1335 LDPTFSGLF--PFKVFNKFQTHVFNALYHTDENVFIGACKGSGKTAMAELALLSHW---- 1388 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDV----QRNLQIPLKGIADERRRRGETEVNLRVG 129 + R +YI P + ++ + +A + T + L Sbjct: 1389 --------RDGKGRAVYICP----SQEKIDFLVKDWRNRFLNVAGGKVINKLT-LELTNN 1435 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGS 187 +RT +++ TPE +L+ R R+ ++ +E +I+D++H ++ Sbjct: 1436 LRT------------LAQSHLILATPEQFD-LLSRRWKRRKNIQTLELLILDDLHMISSD 1482 Query: 188 KRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 GA + R+ + L T+ + +GLS ++ + DV +LG + R Sbjct: 1483 LPGARYENIISRMLFIRGQLETALRIVGLSTSLANGRDVGEWLGAKKATIFNFSFHERVM 1542 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 ++I + + ++ + + V+ S ++F SR Sbjct: 1543 PLQIHL------------QSFHKMHEESLIETMAKSAFLTVQNSVIAGSSVMLFVPSRKN 1590 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 ++ L A ++ S + +S + Sbjct: 1591 CVHISVLLATAAA--GTEYSLRPQKLGLETHLPKVEDGNLRESLKHGIGFFYHGMSSSDK 1648 Query: 365 AITEQALKSGELRCVVATSSLELGIDM-G-AVDLVI---QVATP-------LSVASGLQR 412 AI EQA K + C+ T L + M A ++I Q P VA L+ Sbjct: 1649 AIVEQAWKQKLILCIAITRDLCV---MAPFAETVIIMGTQYYEPREHRYVNYPVADVLEI 1705 Query: 413 IGRAGHQVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQ 467 +G A K + ++ ++ ++ E L + V Sbjct: 1706 VGTAQGNADYPGKVILMTTHDMKAYYKNFLNESLPTESYMLYYLHDGLINDIATSV---I 1762 Query: 468 TVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNR 527 +D + +Y R+ + + L+G ++ Sbjct: 1763 ESKQDCVDWITFTYFYRRIHANPSFYGVKDTSPLGISAYLTGLVQDTLDDLVDSSII--E 1820 Query: 528 ETGILTARPGAQLLAVTSGGTIPDR 552 T + + +G I Sbjct: 1821 ITNPKEDENEDEQILPLNGCMISSH 1845 >UniRef50_A2BLG2 ATP dependent helicase n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BLG2_HYPBU Length = 959 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 213/936 (22%), Positives = 357/936 (38%), Gaps = 136/936 (14%) Query: 14 VFSPATRDWFL-RAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFRE 72 + R+ R +++ T +Q + + ++APTG GKT AA L L R+ E Sbjct: 20 LLHEKVRELIRLRGWRELTEIQEKAIKPILEGHNVFIVAPTGYGKTEAALLPILSRMLEE 79 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 E LYI+P++AL D+ + + V + Sbjct: 80 RVEPVAL---------LYITPLRALINDIYERIS------------WWASRFGFIVARKH 118 Query: 133 GDTPAQERSKLTRNPPDILITTPESL--YLMLTSRARETLRGVETVIIDEVHAVAGSKRG 190 GD P ER++ R+ P IL+TTPESL L + R+ R + VI+DEVH + +KRG Sbjct: 119 GDVPHSERTRRLRHAPHILVTTPESLEIDLDWAPKFRQYYRNLRWVIVDEVHEIVSNKRG 178 Query: 191 AHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQIRI 248 LA+ LER + Q I +SAT+ + A G RP+TVV+ + +I + Sbjct: 179 VQLAVLLERFRRIAG-DFQLIMISATIGEPTIAARAFTGSSRRPLTVVSVEKRKPIEIVV 237 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 A W ++ + T+VF NS+ AEKL Sbjct: 238 DYVEAPSTK-------------------FWRAAAEKLVKHMEPL--TLVFVNSKHAAEKL 276 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 + + HH S+ E+R E Sbjct: 277 HGEIERMGVE--------------------------------GVVVHHASIHGEERRRIE 304 Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLF 428 + K G+L ++AT +LELGID+G++ VI SV+S LQR+GR+GH + G G+ Sbjct: 305 KMAKEGKLNMIIATKTLELGIDIGSIRKVILFRPAGSVSSLLQRLGRSGHTIAGKISGIV 364 Query: 429 FPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRR 488 +L+++ G++E P PLD++A+ + A V++ Y + + Sbjct: 365 LATDPLELLEAIAEARLAAKGKVEVPELPVKPLDMVARAILGMALSGEYTVNDMYDILSK 424 Query: 489 AAPWKDLPRRVFDATLDMLSG----RYPSGDFSAFRP--KLVWNRETGILTARPGAQLLA 542 ++ L R FD +D L + + + P +W + G Q + Sbjct: 425 VYYFRGLTRSEFDELIDYLKNAKMIKINNDGKVSCGPQFYKIWRFDAGDSKYSWWVQNFS 484 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITLGATSWRIQQIT 601 TI +R Y+V + R VGELD + V + RV +I LG +W++ I Sbjct: 485 -QFFTTIGERRAYTVRTVD------GRVVGELDTDFVVKVLRVGHVIRLGGRNWQVIGID 537 Query: 602 R--DQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEE 659 +V+V +PFW+G+G + + + G + E Sbjct: 538 EHNGKVVVAETEQSITAIPFWKGKGPELSRLVIAELEKVIQETHRGQLNIPSSVK--LTE 595 Query: 660 NTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAG 719 + A + G+I E R P +++E+ DE ++ +P RV A + Sbjct: 596 SAAAVLNGIIGEVRKYRYPAPARNKVIVEKLADED---VYVVLAPE--RVVRTLAYLVML 650 Query: 720 RIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAAR 779 + +D V + G + P + E+ + +REAV S FA Sbjct: 651 EAYRS-SSDVYVKLNHYGFAVP-SHSIAFNPLKFLVSLTREEFEERLREAVTRSPYFAE- 707 Query: 780 FRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLP 839 E L+ R+ D E R+ LQ+ +D Sbjct: 708 --EAHNIQLVFGVTRKIKRS--------------------DGVAFEEIARQTLQNYFDPE 745 Query: 840 ALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSE 899 A L++ + G I+I + T S +A S++ + L ++ E Sbjct: 746 AAWELIQGIREGRIKIVFNQSRT-SMYARSVVEEVPEKPWVGDVGELIAETLEGMAFTVE 804 Query: 900 LLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRA 935 L + +G + P+++ +L + R Sbjct: 805 ELADAIG-------VPPEIVESKLRDLGKPGADNRV 833 >UniRef50_O75643 U5 small nuclear ribonucleoprotein 200 kDa helicase n=53 Tax=root RepID=U520_HUMAN Length = 2136 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 106/602 (17%), Positives = 200/602 (33%), Gaps = 63/602 (10%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 LLP P FK +Q + + A + E+ L+ APTG+GKT A + Sbjct: 457 SEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMC 516 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L + + D +I+YI+P+++L ++ + L Sbjct: 517 MLREIGKHINMDGTINV--DDFKIIYIAPMRSLVQEMVGSFGKRLA------------TY 562 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHA 183 + V TGD + K + I++ TPE ++ R + V +I+DE+H Sbjct: 563 GITVAELTGD---HQLCKEEISATQIIVCTPEKWDIITRKGGERTYTQLVRLIILDEIHL 619 Query: 184 VAGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + RG L + R + + IGLSAT+ + DVA FL D + Sbjct: 620 LHDD-RGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLFYFDN 678 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + G E R + + I++ +VF + Sbjct: 679 SFRPV-----------PLEQTYVGITEKKAIKRFQIMNEIVYEKIME-HAGKNQVLVFVH 726 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHH 356 SR K + ++ + + +A E + ++ + HH Sbjct: 727 SRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHH 786 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV---------- 406 +++ R + E ++ +V+T++L G+++ A ++I+ S Sbjct: 787 AGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGA 846 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 LQ +GRAG Q +G+ L++ + +E + L N Sbjct: 847 LDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQM---VSKLPDMLNA 903 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 VL A A++ L Y R+ R+ + Sbjct: 904 EIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDP-----LLDQRRLDLVH 958 Query: 521 PKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY 580 + + ++ VT G I + + + + E++ V+ Sbjct: 959 TAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVF 1018 Query: 581 ES 582 Sbjct: 1019 SL 1020 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 109/588 (18%), Positives = 210/588 (35%), Gaps = 66/588 (11%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P S L + A + F +Q Q ++ S+ + V APTGSGKT+ A Sbjct: 1306 PLPVSALRNS---AFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEF 1362 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L L + R +YI+P++AL V + + Sbjct: 1363 AILRMLLQSS-----------EGRCVYITPMEALAEQVYMDWYEKFQD-----------R 1400 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 +N +V + TG+T + +I+I+TPE ++ + R+ ++ + ++DEVH Sbjct: 1401 LNKKVVLLTGETSTDLK---LLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFVVDEVH 1457 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G G L + R+ + + + + LS+++ +A DVA +LG T P Sbjct: 1458 LIGGEN-GPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHP 1516 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 +R + + + G R S+ + I + + IVF Sbjct: 1517 NVRPVPLELHI------------QGFNISHTQTRLLSMAKPVYHAI-TKHSPKKPVIVFV 1563 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSI-AVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 SR + AA +QR + + + + ++ + + H Sbjct: 1564 PSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYLHEG 1623 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV----------IQVATPLSVAS 408 +S +R + EQ SG ++ VVA+ SL G+++ A ++ I + Sbjct: 1624 LSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYD 1683 Query: 409 GLQRIGRAGHQ-VGGVSKGLFFPR-TRRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLA 465 LQ +G A + + + +++D + L++ + N V Sbjct: 1684 VLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTK 1743 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW 525 A+D L Y R+ + + +L D LS + K + Sbjct: 1744 TIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCIS 1803 Query: 526 NRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 + + + + TI ++S+ L + G + Sbjct: 1804 IEDEMDVAPLNLGMIAAYYYINYTTI---ELFSMSLNAKTKVRGLIEI 1848 >UniRef50_A6QZE8 Putative uncharacterized protein n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6QZE8_AJECN Length = 1597 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 119/582 (20%), Positives = 210/582 (36%), Gaps = 68/582 (11%) Query: 5 PDPSSLLPDVFSPA--TRDWFLRAFK---QPTAVQPQTWHVAARSE-HALVIAPTGSGKT 58 P P + P DW F+ + +Q + + A + + LV APTGSGKT Sbjct: 169 PKPKKDPSERLIPISDLPDWARAGFRNSQKLNRIQTKCFPTAFNDDGNMLVCAPTGSGKT 228 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 A L L + + +T E +I+YI+P+KAL + N LK Sbjct: 229 NVAMLTILREIGKNRNPETGEIMLDD-FKIVYIAPLKALVQEQVGNFGERLK-------- 279 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVI 177 +RV TGD ++ +K I++TTPE ++ R V +I Sbjct: 280 ----PYGIRVSELTGD---RQLTKQQIADTQIIVTTPEKWDVITRKATDTSYTRLVRLII 332 Query: 178 IDEVHAVAGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 IDE+H + RG L + R + IGLSAT+ + DV +FL D Sbjct: 333 IDEIHLLHDD-RGPVLESIVSRTIRKIEQTGDPVRLIGLSATLPNYRDVGSFLRVDPINA 391 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR- 293 + + P + G + + ++ T +L++V ++ Sbjct: 392 LFHFDGSYRP-----------CPLKQEFIGVTDKKAIKQLKTMNDVCYTKVLEQVGTNKN 440 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQ----RSPSIAVDAAHFESTSGATSNRVQSSDV 349 ++F +SR K + + A A E ++ Sbjct: 441 QMLIFVHSRKETAKTARYIRDKAVEMETIGQILRSDAASQAILAEEADAVNDPALKDLMP 500 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP--- 403 + HH +S R ++ G L+ +V T++L G+++ A ++I QV +P Sbjct: 501 YGFGIHHAGMSLADRTSVQELFADGSLQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKG 560 Query: 404 ----LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLEN 453 LS LQ +GRAG Q +G+ L++ + +E +L Sbjct: 561 SWVELSPQDVLQMLGRAGRPQYDTFGEGIIITSQTEMQYYLSLLNQQLPIESQLMSKL-- 618 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL-PRRVFDATLDM--LSGR 510 N VL +D L + R+ R+ + D L+ + Sbjct: 619 -ADNLNAEIVLGNVRNRDEGVDWLGYTYLFVRMLRSPGLYSVGTDYENDEALEQRRVDLI 677 Query: 511 YPSGDFSAFRPKLVWNRETGILTARPGAQL---LAVTSGGTI 549 + + + ++++ G L + ++ +T I Sbjct: 678 HSAATVLEKANLVKYDKKLGRLQSTEFGRIASHYYITHSSMI 719 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 92/580 (15%), Positives = 183/580 (31%), Gaps = 73/580 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAV-------QPQTWHVAARSE-HALVIAP 52 + + + L D+ + ++ Q QT+ ++ + + AP Sbjct: 758 LPERFPAHTPLLDMQRVPVKALKRPEYQNLYPHWDHFNKVQTQTFKSLFDTDDNVFLGAP 817 Query: 53 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGI 112 TGSGKT+ A L + + +YI+P + L + Q L + Sbjct: 818 TGSGKTVCAEFALLHHWSKSTPG-----------KAVYIAPFQELVDHRVTDWQTRLSNL 866 Query: 113 ADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETL 170 + TG+T A + D+++ TP + L+ + R + Sbjct: 867 NG----------GKAILKLTGETTADLK---ILEQADLVLGTPIQWDV-LSRQWQRRRNV 912 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFL 227 + VE I DE+H + G G + + R+ + + IGLS + +A D+ +L Sbjct: 913 QAVELFIADELHMLGGQG-GYIYEVVVSRMHYIALQTEKELRMIGLSVPLSNARDIGEWL 971 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 G + P +R + + + ++ T IL Sbjct: 972 GAKKHTIYNFSPHVRPVPLELHI------------QSYSIPHFPSLMLAMAKPAFTSILQ 1019 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR-VQS 346 + T+VF +R L A + D + + Sbjct: 1020 L-SPDKPTLVFVPTRKQTRSTALDLLAACIAADDEDRFLHADIGEISPLLKRIDEQALAE 1078 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI-------- 398 S +H ++S + I K G ++ ++A+ + I+ A +++ Sbjct: 1079 SISHGIGYYHEALSNSDKRIVTHLFKLGAIQVMLASRDVCWEINFNAHLVIVMNTQFFDG 1138 Query: 399 --QVATPLSVASGLQRIGRAGHQV-GGVSKGLFF--PRTRR---DLVDSAVIVECMFAGR 450 ++ LQ G+A + KG+ R ++ A+ +E Sbjct: 1139 REHRYIDYPISEILQMFGKASRPLEDSSGKGVLMVPAVKRDYYKKFLNEALPIESHLQIY 1198 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR 510 L + A+D + +Y R+ + L + LS Sbjct: 1199 LHDAFV---AEISTRTIASTQDAVDWMTYTYFYRRLLANPSYYGLTDVSHEGLSTFLSEL 1255 Query: 511 YPSGDFSAFRPKLV-WNRETGILTARPGAQLLAVTSGGTI 549 S K++ + E L+ A + A + I Sbjct: 1256 VESTLKELSEAKIIDLDEEDDTLSPLNAAMIAAYYNISFI 1295 >UniRef50_D0NTD6 Pre-mRNA-splicing helicase BRR2, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NTD6_PHYIN Length = 2293 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 128/635 (20%), Positives = 235/635 (37%), Gaps = 73/635 (11%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 P + + VQ + + A ++ E+ L+ APTG+GKT A L L + + Sbjct: 534 PKWAQGAFKGMESLNRVQSKMFPAAFKTSENLLLCAPTGAGKTNVAMLTILHEVMKARDP 593 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 +T E + +I+Y++P+KAL +V NL L + ++V +GD Sbjct: 594 ETGEIDLN-SFKIVYVAPMKALVQEVVLNLSARLS-----------SAYGIQVRELSGD- 640 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHL 193 Q S+ I++TTPE ++ R + V VIIDE+H + + RG L Sbjct: 641 --QNLSREQLFNTQIIVTTPEKWDIITRKSGDDRTYTQLVRLVIIDEIHLLHDT-RGPVL 697 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + + + +GLSAT+ + DVAAFL D + + P Sbjct: 698 EALVARTIRNVEATQQMVRLVGLSATLPNYEDVAAFLRVDPAQGLFYFDSSYRPV----- 752 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 + G E R + ++++ ++F +SR Sbjct: 753 ------PLQQQYIGIMEKKAVKRFALMNEICYEKVMEQAELDNQVLIFVHSRKETASTAQ 806 Query: 311 RLNELYAA-----RLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 L +L+ RL + S + + E+ ++ ++ + HH + ++ R Sbjct: 807 ALRDLFVENDTLARLIKPNSASSEVLLQEAEKIERNDDLKDLLPYGFGIHHAGMKRQDRT 866 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT----------PLSVASGLQRIGR 415 + E A G L+ +V+TS+L G+++ A ++I+ LS LQ +GR Sbjct: 867 LVENAFADGHLKVLVSTSTLAWGVNLPAHTVIIKGTQIYNAEKGDWCELSPLDILQMLGR 926 Query: 416 AGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTV 469 AG Q +G+ + + L++ + VE RL N V+ Sbjct: 927 AGRVQFDTQGEGIIITQHSQLTYYLSLMNQQLPVESQMMSRL---ADNLNAEIVVGSVQN 983 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFRPKLVW 525 A A L + R+ R + A +L R + + A + + Sbjct: 984 VAQAATWLGYTYLFIRMLRNPTLYGISIADRKADPTLLQYRTDLVHSAATLLAKHNLIKY 1043 Query: 526 NRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESR 583 R +G+ ++ + +I Y+ L R+ L E Y Sbjct: 1044 ERRSGLFQVTALGRVASHYYIAHDSI---STYNEYLKPHMSDIEILRLFSLSNEFKY--- 1097 Query: 584 VNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 +I + ++ ++V V + P Sbjct: 1098 ---VIIRSEEKLELVKL-LERVPVPVKESLVSTAP 1128 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 87/567 (15%), Positives = 178/567 (31%), Gaps = 70/567 (12%) Query: 26 AFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 FK+ +Q Q SE + + +P GSGK + A L + L G D + + Sbjct: 1424 RFKRFNPIQTQVLPRLLESESNLFIGSPPGSGKGVLAELAVMKTLLSLGQPDPKSDEFGE 1483 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 ++Y+ P ++ + + + R+ V TGD+ A R Sbjct: 1484 HL-VVYLIPKESNCHQKYEDWKAKFGEESFWRQ---------NVVELTGDSTADLR---L 1530 Query: 145 RNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 +IL+ TP ++ + R+ ++ + +++DE H + G + G + + + R+ + Sbjct: 1531 LASANILVATPTQWDVLSRRWKQRKRIQNISLLLLDETHFLGGGEYGPTIEVVMSRMRFI 1590 Query: 204 L-------------HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + + LS ++ +A DV +LG + N Sbjct: 1591 AADMDKKKKAAGERGGRMRILALSNSIANARDVGEWLGASASEGIYNF-----------H 1639 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P + G + + R ++ + I ++ + +VF S A+ Sbjct: 1640 PNVRPQPLEIRVQGFEINDFSSRMLAMAKPLYNTIANQ-AEKKPAMVFVPSAKQAQLSAI 1698 Query: 311 RLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS----VSKEQRAI 366 L A ++ A + + +S R Sbjct: 1699 DLITFALAENDPQKFVSHAAKDKVELPLE-DAALLHTLENGVGY----CTDTMSSRNREY 1753 Query: 367 TEQALKSGELRCVVATSSLELGIDM-----GAVDLVIQV----------ATPLSVASGLQ 411 +G+++ ++ S+ ++ A +VI +A Q Sbjct: 1754 VLDRFAAGKIQVLIVPQSMAW--ELQSAQCSAFMVVIMGTQFYDGREHRYVDYQLADVFQ 1811 Query: 412 RIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECM-FAGRLEN-LTPPHNPLDVLAQQTV 469 A H K + F + + + + + +LE+ L+ N V Sbjct: 1812 MTKFANHVASPAVKCVLFCHASKKKFYAKFLYDPLPVESQLEHFLSDHINAEIVTKTIES 1871 Query: 470 AAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRET 529 A+D L Y R + + +L D LS + + + + Sbjct: 1872 KQDAVDYLTWTFMYRRFMKNPNYYNLQGATNVHLSDHLSELVETTVNALEESRCIQ--VV 1929 Query: 530 GILTARPGAQLLAVTSGGTIPDRGMYS 556 G + LA + G I Sbjct: 1930 EEEDDDEGEERLAPLNLGMIAAYYYIK 1956 >UniRef50_Q6BI73 DEHA2G12892p n=7 Tax=Saccharomycetaceae RepID=Q6BI73_DEBHA Length = 2145 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 119/606 (19%), Positives = 218/606 (35%), Gaps = 72/606 (11%) Query: 8 SSLLPDVFS---PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 S LP+ P++ +Q + + A S E+ L+ APTG+GKT A L Sbjct: 453 ISELPEWTRCVFPSSET------SSLNRIQSKIFPSAFNSDENLLICAPTGAGKTNVAML 506 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L + +T + + +I+YI+P+KAL + R Q L Sbjct: 507 TILRAIHNYRDPETGQLDL-RNFKIVYIAPLKALVQEQMREFQRRLTA-----------N 554 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV-ETVIIDEVH 182 + V TGD+ K + +L+TTPE ++ + + + +IIDE+H Sbjct: 555 FGIIVNELTGDSSLS---KQQISETQVLVTTPEKWDVITRKSSDLSYTNLTRLIIIDEIH 611 Query: 183 AVAGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + +RG L + R + + +GLSAT+ + DVA L D + Sbjct: 612 LLHD-ERGPVLESIISRTLRQVEYTNDPVRLVGLSATLPNYEDVANLLRVDFKKGLFYFD 670 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 + P + G E + ++ +LD I+F Sbjct: 671 SSYRP-----------CPLEQQFIGIKEKKAIKKLSAMNEACYDKLLDCANNKHQMIIFV 719 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSH 355 +SR K L+E + + D+ E + ++ H Sbjct: 720 HSRKDTYKTAKWLHEKLVQDDKLDVVLKSDSGSREILKSEAEEMDNRSLKEIVPAGFGIH 779 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV---ATP-------LS 405 H ++K +R++ E G L+ +V+T++L G+++ A +VI+ +P LS Sbjct: 780 HAGLNKRERSVVEDLFAQGHLQVLVSTATLAWGVNLPAHTVVIKGTETYSPERGTWVQLS 839 Query: 406 VASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHN 459 LQ +GRAG + +G+ +++ + +E +L N Sbjct: 840 PQDILQMLGRAGRPRYDKSGEGVIITSQDEIQYYLAILNQQLPIESQLMTKL---ADNLN 896 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG---RYPSGDF 516 VL A++ L Y R+ R+ + D + + Sbjct: 897 AEIVLGTIKSREDAVNWLGYTYLYIRMLRSPALYHVGADYKDDENLYWKRVDLIHSALTI 956 Query: 517 SAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGEL 574 LV+N E G + + ++ + TI MY+ L + ++ + Sbjct: 957 LHENKLLVYNHENGDIKSTELGKISSHYYINYETIN---MYNNQLKPWSTEIDILKIFSM 1013 Query: 575 DEEMVY 580 E + Sbjct: 1014 SGEFKF 1019 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 93/673 (13%), Positives = 199/673 (29%), Gaps = 116/673 (17%) Query: 27 FKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F Q Q + S E+ + A G GKT+ A L L K+ Sbjct: 1317 FSYFNKFQSQVFQALFNSNENVFIGASKGCGKTVCAELAILKHW------------KQNK 1364 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 RI+YI+P + + + + I + + + +GD Sbjct: 1365 GRIVYINPTQEIIDKQLKIWRKIYSKITEPSKV---------INKLSGDLTTD---IGLL 1412 Query: 146 NPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL- 203 + +++ TPE + R R++++ +E +I D+ H V RG + + R+ + Sbjct: 1413 SSSHLVLATPEQFEFVSRRWRQRKSVQAIELLINDDAHMVGNGSRGIAYEILVARMRLIS 1472 Query: 204 --LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 + + I LS ++ + D ++G + P+ R +I+ + Sbjct: 1473 TQVENGLRIIALSNSLSNGRDFGEWIGCTKQNVFNFDPSNRFNKIKEIR----------- 1521 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 + + + S+ + D +S IVF +R + + + + Sbjct: 1522 LQASNFNDNDSFMQSLIRPSYQFLKDNTKEGKS-IVFVPTRKQCIETAFKYIQHSSNDNW 1580 Query: 322 RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA 381 ++ T + ++ ++S+ + I E+ + L ++A Sbjct: 1581 SLLRTDLEILEP-YLKRITDKSLTECLSRGIGLYYNNMSQTDKLIIEKLFNNNVLSILIA 1639 Query: 382 TSSLELGIDMGAVDL----------VIQVAT----------PLSVASGLQRIGRAGHQVG 421 + D V+ S+ + L+ +G Sbjct: 1640 -----------SKDTCYYCPSANNIVVLSTQEFEGKEHRFIDYSINNILEMVG----CCK 1684 Query: 422 GV---SKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 +K L F + + ++ A+ +E L + Sbjct: 1685 DDVNEAKSLIFTNSAKLNYYNKFLNEALPIESFLNVCLPDAFIT---EVSTRTFKTRQDC 1741 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG----------DFSAFRPKL 523 +D L +Y R+ + D+ + LS S + Sbjct: 1742 IDWLTFTYFYRRLLANPSFYDVKDTSHLGISEFLSVLVESTLKELEEAKIIEIEESEDSE 1801 Query: 524 VWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESR 583 E + GA + A + ++ L + + K + E V R Sbjct: 1802 ESGEEEEEIVPLNGAMISAYYNVS-FNTVKEFNRLGNKTKLKGILEIITSASEFDVLPIR 1860 Query: 584 VNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRG--------EGNGRPAELGEMI 635 N+ L ++ ++V V A P+++ P +L Sbjct: 1861 QNEEAILS----KV----HNKVPVK-ASDVDYESPYFKAFLLLQAHFSRIPLPLDLANDQ 1911 Query: 636 GDFLHLLADGAFF 648 L + Sbjct: 1912 KVVLESALKILYA 1924 >UniRef50_Q55CI8 Activating signal cointegrator 1 complex subunit 3-like n=10 Tax=Eukaryota RepID=HELCL_DICDI Length = 2237 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 112/615 (18%), Positives = 221/615 (35%), Gaps = 73/615 (11%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYAL 66 LP+ + K VQ + + A ++++ L+ APT SGKT A L L Sbjct: 533 IEELPEWSRLPFEE---SGVKSLNRVQSKLFDCAFKTDNNLLLSAPTSSGKTNVAMLTIL 589 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + + D+ + + +I+YI+P+K+L ++ N LK + Sbjct: 590 HEIGKNRDRDSGK-IRLDAFKIVYIAPMKSLVQEMVGNFSKRLK------------SYGI 636 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVA 185 V TGD + + I++TTPE ++ S R + V+ +IIDE+H + Sbjct: 637 VVNELTGDQSLTNKQ---ISETQIIVTTPEKWDIITRKSGDRAYTQLVKLIIIDEIHLLH 693 Query: 186 GSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 +RG L + R ++ ++ + +GLSAT+ + DVA FL + + R Sbjct: 694 D-ERGPVLECIVARTLRMIESTQQMVRLVGLSATLPNYEDVATFLRVEPDGVFYFDSSYR 752 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 + D + T + + V H ++F +SR Sbjct: 753 PIPLEQQY-------------IGISDRGIKQLQRCNDITFTKVSERVGDH-QILIFVHSR 798 Query: 303 GLAEKLTARLNELYAARLQRSPSI----AVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 K L + I + + ++ + ++ + HH Sbjct: 799 RETAKTGKDLRDRAVEDQSIDRYIRDPASREILRATASKQIQNAELKDLLPYGIGIHHAG 858 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT---------PLSVASG 409 +S+ R++ E ++ +++T++L G+++ A ++I+ LS Sbjct: 859 LSRSDRSLVEDLFGDNRIQVLISTATLAWGVNLPAHTVIIKGTQIYNPEKGWCELSPLDV 918 Query: 410 LQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDV 463 Q +GRAG +G+ L+++ + +E F + + N V Sbjct: 919 TQMLGRAGRPPFDKEGEGIIITSQHELQFYLSLLNTQLSIESQF---ISRIADNLNAEIV 975 Query: 464 LAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAF 519 L A++ L Y + R P ++ F+ + R + + Sbjct: 976 LGSIQTVRDAVNWLGYTYLYICMIRNPPLYEISYDDFEKDPLLEQRRLDLVHSAATILEK 1035 Query: 520 RPKLVWNRETGILTARPGAQL---LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 + ++R++G L + ++ +T+ +Y L RV L Sbjct: 1036 NSLIKYDRKSGKLQSTELGKVASHYYITNSSM----SIYQEHLKPSMSDIELLRVFSLSS 1091 Query: 577 EMV-YESRVNDIITL 590 E R + L Sbjct: 1092 EFKNVVVREGEKFEL 1106 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 102/576 (17%), Positives = 210/576 (36%), Gaps = 73/576 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P +L D P F F A+Q Q ++ +S ++A + APT SGKT+ A + Sbjct: 1376 PLPIQVLKD---PKAESIFKPTFSIFNAIQTQVFNCMYQSNDNAFISAPTNSGKTVCAEI 1432 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + + ++++Y++P++ L + ++ ++ Sbjct: 1433 ALIRCF-----------KQNPKAKVVYLAPMQDLASVRLKDWSNKFG---------VKSP 1472 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEV 181 L V TGD + + +I++T E +L+ + R+ L+ + +I+DE+ Sbjct: 1473 FGLVVSDLTGDAVTDNK---ILDRSNIIVTNCEKWD-ILSRKWKQRKALQSINLLIVDEL 1528 Query: 182 HAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 H + G G + + + R+ + + + I LS+++ +A D+ ++G Sbjct: 1529 HLIGGEY-GPTMEIVVSRMRYISTQTGNALRVIALSSSIANARDLVLWIGATPQTCYNFH 1587 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 P +R + + G R ++ + +++ +IVF Sbjct: 1588 PNVRPIPVEYQI------------QGFEFPHFNARMLAMTKPTVYEVAK--NKNQQSIVF 1633 Query: 299 TNSRGLAEKLTARLN---ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 +R L+ L A + + L + + + S ++ S + Sbjct: 1634 VPTRKLSRSLAADIIANVSSFEDTLTKPYLVCEEHVLTPYLEDVDSFALKQSLQMGVAFY 1693 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGI-DMGAVDLVIQVAT----------PL 404 H +++ +R + E +SG +R ++AT S+ + ++ A +VI Sbjct: 1694 HDGLTERERRVVEILFRSGSIRVLIATHSVAWLLDNVFAQLVVIMGTQLYQGKDIRYIDY 1753 Query: 405 SVASGLQRIGRAGHQVGG------VSKGLFFPRTRRDLVDSAVIVECM-FAGRLEN-LTP 456 + LQ IGRAG Q GG V+K L + + E + L++ L Sbjct: 1754 PINDILQMIGRAGKQEGGGVISNKVAKVLLLCHAPKKEYYKMFLNEPLPVESHLDHCLHD 1813 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 N V T A+D L Y R+ + + +L + LS + Sbjct: 1814 QFNSEIVTKTITKKQDALDYLTWTFLYRRLNQNPNYYNLSGVSHLHLSEHLSELVENTLV 1873 Query: 517 SAFRP-KLVWNRETGILTARPGAQL--LAVTSGGTI 549 + + + ++ + TI Sbjct: 1874 ELEQSNCITIQDDQDKVSPLNLGIIASYYYLKYQTI 1909 >UniRef50_C0NG17 Pre-mRNA-splicing factor brr2 n=3 Tax=Leotiomyceta RepID=C0NG17_AJECG Length = 2911 Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats. Identities = 115/581 (19%), Positives = 201/581 (34%), Gaps = 65/581 (11%) Query: 29 QPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSR 87 + +Q + + A + + LV APTGSGKT A L L + + +T E + Sbjct: 441 KLNRIQTKCFPTAFNDDGNMLVCAPTGSGKTNVAMLTILREIGKNRNHETGEIMLDD-FK 499 Query: 88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNP 147 I+YI+P+KAL + N LK +RV TGD ++ +K Sbjct: 500 IVYIAPLKALVQEQVGNFSERLK------------PYGIRVSELTGD---RQLTKQQIAD 544 Query: 148 PDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDA---L 203 I++TTPE ++ R V +IIDE+H + RG L + R Sbjct: 545 TQIIVTTPEKWDVITRKATDTSYTRLVRLIIIDEIHLLHDD-RGPVLESIVSRTIRKIEQ 603 Query: 204 LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVAS 263 + IGLSAT+ + DV +FL D + + P + Sbjct: 604 TGDPVRLIGLSATLPNYRDVGSFLRVDPINALFHFDGSYRP-----------CPLKQEFI 652 Query: 264 GTGEDSHAGREGSIWPYIETGILDEVLRHR-STIVFTNSRGLAEKLTARLNELYAARLQR 322 G + + ++ T +L++V ++ ++F +SR K + + Sbjct: 653 GVTDKKAIKQLKTMNDVCYTKVLEQVGTNKNQMLIFVHSRKETAKTARYIRDKAVEMETI 712 Query: 323 SPSIAVDAAHF----ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + DAA E ++ + HH +S R ++ G L+ Sbjct: 713 GQILRSDAASRAILAEEADAVNDPALKDLMPYGFGIHHAGMSLADRTSVQELFADGSLQV 772 Query: 379 VVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRAGH-QVGGVSKGL 427 +V T++L G+++ A ++I QV +P LS LQ +GRAG Q +G+ Sbjct: 773 LVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSWVELSPQDVLQMLGRAGRPQYDTFGEGI 832 Query: 428 FFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 L++ + +E +L N VL +D L Sbjct: 833 IITSQTEMQYYLSLLNQQLPIESQLMSKL---ADNLNAEIVLGNVRNRDEGVDWLGYTYL 889 Query: 483 YSRVRRAAPWKDL-PRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLL 541 + R+ R+ + D L+ + ++ L Sbjct: 890 FVRMLRSPGLYSVGTDYENDEALE-------QRRVDLIHSAATVLEKANLVKYDKKLGRL 942 Query: 542 AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYES 582 T G I + V ++ ++ Sbjct: 943 QSTELGRIASHYYITHSSMSTYNYHLQPMVSTIELFRIFAL 983 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 91/580 (15%), Positives = 182/580 (31%), Gaps = 73/580 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAV-------QPQTWHVAARSE-HALVIAP 52 + + + L D+ + ++ Q QT+ ++ + + AP Sbjct: 1257 LPERFPAHTPLLDMQRVPVKALKRPEYQSLYPHWDHFNKVQTQTFKSLFDTDDNVFLGAP 1316 Query: 53 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGI 112 TGSGKT+ A L + + +YI+P + L + Q L + Sbjct: 1317 TGSGKTVCAEFALLHHWSKSTPG-----------KAVYIAPFQELVDHRVTDWQTRLSNL 1365 Query: 113 ADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETL 170 + TG+T A + D+++ TP + L+ + R + Sbjct: 1366 NG----------GKNILKLTGETTADLK---ILEQADLVLGTPIQWDV-LSRQWQRRRNV 1411 Query: 171 RGVETVIIDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFL 227 + VE I DE+H + G G + + R+ + + IGLS + +A D+ +L Sbjct: 1412 QAVELFIADELHMLGGQG-GYIYEVVVSRMHYIALQTEKELRMIGLSVPLSNARDIGEWL 1470 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 G + P +R + + + ++ T IL Sbjct: 1471 GAKKHTIYNFSPHVRPVPLELHI------------QSYSIPHFPSLMLAMAKPAFTSILQ 1518 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR-VQS 346 + +VF +R L A + D + + Sbjct: 1519 L-SPDKPALVFVPTRKQTRSTALDLLAACIAADDEDRFLHADIGEISPLLKRIDEQALAE 1577 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI-------- 398 S +H ++S + I K G ++ ++A+ + I+ A +++ Sbjct: 1578 SISHGIGYYHEALSNSDKRIVTHLFKLGAIQVMLASRDVCWEINFNAHLVIVMNTQFFDG 1637 Query: 399 --QVATPLSVASGLQRIGRAGHQV-GGVSKGLFF--PRTRR---DLVDSAVIVECMFAGR 450 ++ LQ G+A + KG+ R ++ A+ +E Sbjct: 1638 REHRYIDYPISEILQMFGKASRPLEDSSGKGVLMVPAVKRDYYKKFLNEALPIESHLQIY 1697 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR 510 L + A+D + +Y R+ + L + LS Sbjct: 1698 LHDAFV---AEISTRTIASTQDAVDWMTYTYFYRRLLANPSYYGLTDVSHEGLSTFLSEL 1754 Query: 511 YPSGDFSAFRPKLV-WNRETGILTARPGAQLLAVTSGGTI 549 S K++ + E L+ A + A + I Sbjct: 1755 VESTLKELSEAKIIDLDDEDDTLSPLNAAMIAAYYNISFI 1794 >UniRef50_C4QXA9 RNA-dependent ATPase RNA helicase (DEIH box) n=1 Tax=Pichia pastoris GS115 RepID=C4QXA9_PICPG Length = 2147 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 119/616 (19%), Positives = 224/616 (36%), Gaps = 72/616 (11%) Query: 1 MADNPDPSSLLPDVFSPA--TRDWFLRAFK-----QPTAVQPQTWHVAA-RSEHALVIAP 52 + P+ + +W +AF +Q + + +A E+ L+ AP Sbjct: 455 IPAPEPPTMGSDERLVSISELPNWAQQAFPNSETLTLNRIQSKVYPIAFKEDENILLCAP 514 Query: 53 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGI 112 TGSGKT A L L + + +DT K +I+YI+P+KAL + R Q Sbjct: 515 TGSGKTNVALLTILRTISKFRNQDTGTLALNK-FKIVYIAPLKALVQEQVREFQRRFD-- 571 Query: 113 ADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLR 171 ++VG TGD +K IL+TTPE ++ + +R Sbjct: 572 ----------SFGIKVGELTGD---SNLTKHQIKSTQILVTTPEKWDIITRKMSDISYVR 618 Query: 172 GVETVIIDEVHAVAGSKRGAHLALSLERLDA---LLHTSA-QRIGLSATVRSASDVAAFL 227 V +IIDE+H + +RG + + R + + +GLSAT+ + +DVA FL Sbjct: 619 LVRLLIIDEIHLLHD-ERGPVIESIVSRSIRNDEISGNEPVRLVGLSATLPNFNDVATFL 677 Query: 228 GGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 287 D + P ++ G E R ++ ++D Sbjct: 678 RVDESKGLFYFDGSYRP-----------CPLAQQFVGILEKKALKRYQAMNQACLDKVID 726 Query: 288 EVLRHRSTIVFTNSRGLAEKLTARLNELYAA----RLQRSPSIAVDAAHFESTSGATSNR 343 + IVF +SR K L E +A L + + E + +S Sbjct: 727 NLQGDHQIIVFVHSRVDTAKTARYLMENLSACNKLDLLQKTDLGSKEILREESKSFSSED 786 Query: 344 VQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATP 403 +++ V HH ++K+ R++ E G ++ +V+T++L G+++ A ++I+ + Sbjct: 787 LRNLVVSGIGIHHAGLNKQDRSLVEDLFADGYVQVLVSTATLAWGVNLPAHTVIIKGTSV 846 Query: 404 LS----------VASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMF 447 S LQ +GRAG + +G+ +++ + +E Sbjct: 847 YSPEKGVWSQLAPQDILQMLGRAGRPRYDKTGEGIIITVQEEVQYYLAILNQQLPIESQL 906 Query: 448 AGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR-VFDATLDM 506 ++ + N VL T A+ + R+ R+ + D TL Sbjct: 907 MSKIHDC---LNSEIVLGTVTSRQEAVSWFSYSYLFVRMLRSPALYHVGPEYSQDKTLLE 963 Query: 507 LSGRYPSGDFSAFR--PKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEG 562 + + + + ++ +G + ++ TI +++ L Sbjct: 964 MRLDICHSALTQLQKNGLISFDPLSGKVWPNYLGRISSYFYIDHSTI---SLFNKFLKPY 1020 Query: 563 EEKAGSRRVGELDEEM 578 R+ E Sbjct: 1021 STDIDLLRIFSQSSEF 1036 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 86/592 (14%), Positives = 188/592 (31%), Gaps = 103/592 (17%) Query: 3 DNPDPSSLLP-----DVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSG 56 P P +P ++ P R F F+ Q + ++ ++ AL+ A G G Sbjct: 1309 RPPTPLEEVPLIPVHNLNLPECRTVFD--FEFFNKFQTRVFNSVFETDASALICANKGCG 1366 Query: 57 KTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER 116 KT+ A L L R +Y+SP A + + + K +A Sbjct: 1367 KTVIAELALLR------------LWCSGNGRAIYVSPCDATIAKIYKIWRRKFKSVAG-- 1412 Query: 117 RRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVET 175 + + TG+ + + + D+++ TP L + + R ++ +E Sbjct: 1413 --------GKVIKVLTGELNSDLK---LLSISDVILATPAHLDQLCRRWKNRSVVQSIEL 1461 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRP 232 V+ D+ H V G ++L R+ + + +GLS + A D ++LG + Sbjct: 1462 VVADDCHTVGNGYNGFIYEVALSRIRIMAIQLSKPIRIVGLSNPLARADDFGSWLGVEID 1521 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 R + I + +++ + S+ + I D+ Sbjct: 1522 HNYNFDSKERIAPLEIEIKSSDIKENHSMILA------------MLKIGFQAISDKF--- 1566 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARL-QRSPSIAVDAAHFESTSGATSNRVQSSDVFI 351 S++VF L ++ L L+ R S + +G R++ Sbjct: 1567 GSSVVFLPDTELCFEVGQELLTLFRKRNYNGSSQKFQPPVDSKHLAGIRDVRLKHLISQG 1626 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLV----------IQVA 401 + ++ + E + G L+ ++ + D+V + Sbjct: 1627 IGILYQGIAGNDQNTIENLYELGCLKVIIC-----------SRDVVSLAPPCDFACVMGT 1675 Query: 402 T----------PLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR-----DLVDSAVIVECM 446 S++ L+ +G + L + + + + VE Sbjct: 1676 QFYEGREHRYIDYSISDILEMVG------VSSLQALIVTNSGKLDYYTKFLSEPLPVESH 1729 Query: 447 FAGRLENLTPPHNPLDVLAQQT-VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 + L + + Q +D L +Y R++ + + + Sbjct: 1730 LSLFLTDAFVNE----ISCQVVRNRQDCIDWLTYTFFYRRLQLNPSYYGVTDVSSVGLSE 1785 Query: 506 MLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 LS + +++ +E + +++ +T I Y+V Sbjct: 1786 YLSELVETTVNELTESQMIEFQEVDDDEIKDVVEIVPLT-ATMIAS--YYNV 1834 >UniRef50_P32639 Pre-mRNA-splicing helicase BRR2 n=6 Tax=Saccharomycetaceae RepID=BRR2_YEAST Length = 2163 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 117/604 (19%), Positives = 215/604 (35%), Gaps = 69/604 (11%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYA 65 + LPD A +Q + +H A + + L+ APTGSGKT A L Sbjct: 479 EITSLPDWCQEAFPSSET---TSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTV 535 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L L T++ + +I+YI+P+KAL + R Q L + Sbjct: 536 LKALSHHYNPKTKKLNLSA-FKIVYIAPLKALVQEQVREFQRRLA------------FLG 582 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAV 184 ++V TGD+ + + +L++TPE + + + V +IIDE+H + Sbjct: 583 IKVAELTGDSRLSRKQ---IDETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLL 639 Query: 185 AGSKRGAHLALSLERL---DALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 RG L + R + IGLSAT+ + DV FL + + Sbjct: 640 HDD-RGPVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSF 698 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R +S G E + + ++ +L+ + IVF +S Sbjct: 699 RP------------CPLSQQFCGIKERNSLKKLKAMNDACYEKVLESINEGNQIIVFVHS 746 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHG 357 R + L +A DA + + ++ +HH Sbjct: 747 RKETSRTATWLKNKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHA 806 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------LSVA 407 +++ R+++E G L+ +V T++L G+++ A ++I+ V +P LS Sbjct: 807 GLTRSDRSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQ 866 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPL 461 LQ +GRAG + +G+ +++ + +E F + L N Sbjct: 867 DVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYLSVLNQQLPIESQF---VSKLVDNLNAE 923 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGD--FSAF 519 V A++ L Y R+ + +P D L Sbjct: 924 VVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKVPDISSDGQLKKFRESLVHSALCILKE 983 Query: 520 RPKLVWNRETGILTARPGAQL---LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 + ++++ E ++ A + + +Y+ L E + R+ + E Sbjct: 984 QELVLYDAENDVIEATDLGNIASSFYINHASM----DVYNRELDEHTTQIDLFRIFSMSE 1039 Query: 577 EMVY 580 E Y Sbjct: 1040 EFKY 1043 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 84/618 (13%), Positives = 179/618 (28%), Gaps = 92/618 (14%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR 71 D FS FK +Q Q + S + V + G+GKT A L L+ Sbjct: 1337 DDFSEVFE------FKTFNKIQSQVFESLYNSNDSVFVGSGKGTGKTAMAELALLNHW-- 1388 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 ++ R +YI+P + + + + +R ++ + Sbjct: 1389 ----------RQNKGRAVYINP----SGEK-------IDFLLSDWNKRFSHLAGGKIINK 1427 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVAGSKR 189 G+ P+ L + +L+ TP +L+ R R+ ++ +E +I D+ H ++ Sbjct: 1428 LGNDPSLNLKLLAK--SHVLLATPVQFE-LLSRRWRQRKNIQSLELMIYDDAHEISQGVY 1484 Query: 190 GAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 GA + R+ + + + LS + +A D + M I Sbjct: 1485 GAVYETLISRMIFIATQLEKKIRFVCLSNCLANARDFGEW------------AGMTKSNI 1532 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 P ++ + + H S+ S+ VF SR Sbjct: 1533 YNFSPSERIEPLEINIQSFKDVEHISFNFSMLQMAFEASAAAAGNRNSSSVFLPSRKDCM 1592 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 ++ + + ++ ++ + T +++ + ++ I Sbjct: 1593 EVASAFMK-FSKAIEWDMLNVEEEQIVPYIEKLTDGHLRAPLKHGVGILYKGMASNDERI 1651 Query: 367 TEQALKSGELRCV-----VATSSLE--------LGIDMGAVDLVIQVATPLSVASGLQRI 413 ++ + G + + S+ LG ++ D P ++ L+ + Sbjct: 1652 VKRLYEYGAVSVLLISKDC--SAFACKTDEVIILGTNL--YDGAEHKYMPYTINELLEMV 1707 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-----LTPPHNPLDVLAQQT 468 G A K L ++E + E+ + N + Sbjct: 1708 GLASGNDSMAGKVLILTSHNMKAYYKKFLIEPL---PTESYLQYIIHDTLNNEIANSIIQ 1764 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY--PSGDFSAFRPKLVWN 526 +D +Y R+ + + LS D + + Sbjct: 1765 SKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDD 1824 Query: 527 RETGILTARPGA-----QLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR---------RVG 572 E + G ++++ S G I S + + S + Sbjct: 1825 TEAEVTAEVNGGDDEATEIISTLSNGLIASHYGVSFFTIQSFVSSLSNTSTLKNMLYVLS 1884 Query: 573 ELDEEMVYESRVNDIITL 590 E R D L Sbjct: 1885 TAVEFESVPLRKGDRALL 1902 >UniRef50_UPI0001791CD4 PREDICTED: similar to pre-mRNA-splicing helicase BRR2 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791CD4 Length = 2093 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 115/613 (18%), Positives = 217/613 (35%), Gaps = 84/613 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P LP PA D FK +Q + A S E+ L+ APTG+GKT A L Sbjct: 465 PIDKLPKYVQPAFED-----FKSLNRIQSRLQKSALESDENLLLCAPTGAGKTNVALLCM 519 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + + D +I+YI+P+++L ++ + L + N Sbjct: 520 LREIGKHINSDGTINA--DEFKIIYIAPMRSLVQEMVGSFGKRL------------SSYN 565 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAV 184 L V TGD + ++ I++ TPE ++ + + V +IIDE+H + Sbjct: 566 LTVSELTGD---HQLTREQIQATQIIVCTPEKWDIITRKGGEKTFVSLVRLIIIDEIHLL 622 Query: 185 AGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 +RG L + R + + +GLSAT+ + DVA L + + Sbjct: 623 HD-ERGPVLEALVARTIRNIETIQEDVRLVGLSATLPNYQDVATLLRVNPDTGLFYFDNS 681 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P + G E R + + I++ R+ +VF +S Sbjct: 682 FRPV-----------PLEQQYIGITEKKAVKRFQVMNEIVYEKIMEHAGRN-QILVFVHS 729 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHG 357 R K + ++ + + +A E + ++ + HH Sbjct: 730 RKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAEQVKNQELRDLLPYGFAIHHA 789 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV----------A 407 +++ R + E ++ +++T++L G+++ A ++I+ S Sbjct: 790 GMTRVDRTLVEDLFADRHIQVLISTATLAWGVNLPAHTVIIKGTQVYSPEKGRWVELGAL 849 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPL 461 LQ +GRAG Q +G+ L++ + +E + L N Sbjct: 850 DVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQM---VSKLPDMLNAE 906 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR--VFDATLD-MLSGRYPSGDFSA 518 VL A+ L Y R+ R+ + D L+ + + Sbjct: 907 IVLGTIQSVKEAVTWLGYSYLYIRMLRSPALYTITPEKLEVDPLLETHRADIIHTAAIQL 966 Query: 519 FRPKLV-WNRETGILTARPGAQL--LAVTSGGTI-----------PDRGMYSVLLPEGEE 564 R L+ ++R++G ++ + T+ + ++ V GE Sbjct: 967 ERSNLIKYDRKSGYFQVTELGRIASHYYCTHDTMATYNQLLKPTLSEIELFRVFSLSGEF 1026 Query: 565 KAGSRRVGELDEE 577 + +G DEE Sbjct: 1027 RH----IGVRDEE 1035 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 81/485 (16%), Positives = 163/485 (33%), Gaps = 46/485 (9%) Query: 110 KGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARE 168 + I + +V + TG+ + I++TT E ++ + R+ Sbjct: 1337 ELIYSSWHVIFGIGLARKVVLLTGEIGTDLK---LLAKGQIIVTTAEKWDVLSRRWKQRK 1393 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAA 225 ++ + I+DE+ + G G L + R+ + + + LSA + A D+A Sbjct: 1394 NVQNINLFIVDELQLIGGED-GPVLEIVCSRMRYIASQTEKQMRVVALSAPLADARDLAL 1452 Query: 226 FLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI 285 +LG T P++R + + V G +A R ++ I Sbjct: 1453 WLGAPATTTFNFHPSVRPVPLELHV------------QGYNVTHNATRLVAMGKPTYNAI 1500 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRV 344 L + I+F SR A L AA Q + I + + + + Sbjct: 1501 LK-YSLEKPVIIFVPSRKQARLTAIDLLTYTAADNQSNRFIHAEEDDIKPFVEKISDKTL 1559 Query: 345 QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI------ 398 + + + H VS + + +Q +G ++ VV T SL + + + ++I Sbjct: 1560 KETLLQGVAYLHEGVSSQDQRWVQQLFFTGAIQVVVVTRSLCWALSITSHLVIIMDTQFY 1619 Query: 399 ----QVATPLSVASGLQRIGRAGHQV-GGVSKGLFFPRTR-----RDLVDSAVIVECMFA 448 + +Q +GRA + SK + ++ + ++ + VE Sbjct: 1620 DGKTHAYEDYPITDVIQMVGRANRPLDDDDSKCVLMCQSSKKDFFKKFLNEPLPVESHLD 1679 Query: 449 GRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 RL N V A+D + Y R+ + A + +L D LS Sbjct: 1680 HRLH---DHFNAEIVTKTIENKQDAVDYMTWTFLYRRLTQNANYYNLQGVSHRHLSDYLS 1736 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKA 566 + + K + + + + TI ++S+ L + Sbjct: 1737 ELVETTLNDLNQSKCISIEDEIDCIPLNLGMIAAYYYINYTTI---ELFSLSLNNKTKIR 1793 Query: 567 GSRRV 571 G + Sbjct: 1794 GLLEI 1798 >UniRef50_B6KDV2 Sec63 domain-containing DEAD/DEAH box helicase, putative n=3 Tax=Toxoplasma gondii RepID=B6KDV2_TOXGO Length = 2198 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 115/613 (18%), Positives = 210/613 (34%), Gaps = 74/613 (12%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTL 59 AD P S LP+ PA + +Q + + VA E+ L+ APTG+GKT Sbjct: 508 ADARQPISALPEWAQPAFS---CVNIETLNPMQSKVFRVAFEEFHENLLLCAPTGAGKTN 564 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 A L L+ + R T + +++YISP+KAL + + L Sbjct: 565 VAMLAILNVIGRHRNAKTGAVDLA-SFKVVYISPMKALVAEQVQAFSQRL---------- 613 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVII 178 + V TGD ++ +++TTPE ++ R + V VII Sbjct: 614 --QPYGVSVRELTGDVNL---TRQQIEETQVIVTTPEKWDIITRKAGERAYTQLVRLVII 668 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTV 235 DE+H + + RG L + R + T + +GLSAT+ + DVA L + Sbjct: 669 DEIHLLHDA-RGPVLESIIARTIRQIETAQEHIRLVGLSATLPNYDDVAVCLRVAPEKGL 727 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 P + G + R ++ +++ + Sbjct: 728 FFFGNHYRPV-----------PLKQTYIGIKDKKAIKRYNTMNEVTYEKLMESAGKS-QV 775 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFI 351 ++F +SR K + ++ R + A E + ++ + Sbjct: 776 LIFVHSRKETVKTARFIRDMAMQRDTLPRFLQHMTASREILQSEAEAVKTGDLKELLPYG 835 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA---------- 401 HH + + R + E ++ +V+T++L G+++ A ++I+ Sbjct: 836 FAVHHAGLPRTDRKLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYLPEKGAW 895 Query: 402 TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLT 455 LS LQ +GRAG Q + + L + + +E L L Sbjct: 896 AELSPMDVLQMMGRAGRPQYDTSGHAILITQHSELQYYLSLNNQQLPIESQM---LSCLP 952 Query: 456 PPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP--- 512 N VL A++ L Y R+ + +P + D L ++ Sbjct: 953 DMLNAEVVLGSVRSREDAVNWLGYTYLYVRMLKNPSLYGVPPEDAER--DKLLEQHCVNL 1010 Query: 513 ---SGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAG 567 + + ++R G + ++ TI +Y+ + Sbjct: 1011 VDSALKILDKNFLIKYDRRMGAIQVTALGRVASHYYIKYPTI---AVYNQHMKPTLSDIE 1067 Query: 568 SRRVGELDEEMVY 580 R+ L E Y Sbjct: 1068 LLRLFSLSSEFKY 1080 Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats. Identities = 101/636 (15%), Positives = 196/636 (30%), Gaps = 91/636 (14%) Query: 1 MADNPDPSSLLPDVFSPA---------TRDWFLRAFKQPTAVQPQTWHVAARS-EHALVI 50 + + P + L D P + +FK +Q Q + + E+ L+ Sbjct: 1345 LPERTPPHTELLD-LQPLPITALRDAKMEQVYSGSFKAFNPIQTQVFSTLFATNENVLLC 1403 Query: 51 APTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLK 110 P SGK + L + E + +YI+P + + + L Sbjct: 1404 LPPTSGKEICLEFALLRMVKTEPASQW---------KAVYIAPHPLVVKERLEDWVTKL- 1453 Query: 111 GIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARET 169 + L++ TG+ + +++ TPE+ + + R+ Sbjct: 1454 ----------GRGLGLKLAELTGEMQHDMK---LVEQSQLILATPENWDFVSRRWKTRKA 1500 Query: 170 LRGVET------------VIIDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLS 214 L+ + V G+ L + L R + L + + ++ Sbjct: 1501 LQSIRLLLVDDLHLLNSSV-------------GSTLEICLSRTRYISAQLQRPIRIVAMA 1547 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 ++ +A DV +LG P++R + I + ++ + + + Sbjct: 1548 NSLANAKDVGDWLGVSSSGLFNFHPSVRTVPLEISLHGFDVYHREARLLAMSKAVY---- 1603 Query: 275 GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA-VDAAHF 333 ++ Y + + ++ IVF + R L AA + D Sbjct: 1604 QAVKLYTRDDDRSTLKKLKNVIVFCSDRRHCRLTAIDLLLQAAADDDPKKFLHVSDEVMR 1663 Query: 334 ESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV----ATSSLELGI 389 + TS + + + H +S ++ + +Q +G ++ VV G+ Sbjct: 1664 KYTSVVRDKMLSETLAYGVGLLHSGLSAAEQQLVQQLHAAGAIQVVVVAEEC----AWGL 1719 Query: 390 DMGAVDLVI--------QVATPLSVASGLQRIGRAGHQ-VGGVSKGLFFP-RTRRDLVDS 439 M A +VI +VA LQ +G A + + F ++R+ Sbjct: 1720 QMYAHLVVIVDTKKFTENGYEDYTVADVLQMLGHATRPSIDKHGFAVLFCPSSKREFYKK 1779 Query: 440 AVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 V +LE NL N VL A+D L Y R+ + + L Sbjct: 1780 FVFEPLPVESQLEQNLVDHINAEVVLKTIENKQDAVDWLTWTFLYRRLAKNPNYYGLQGV 1839 Query: 499 VFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYS 556 D LS S + + + V + L + TI Sbjct: 1840 SHQHLSDYLSELVESSVHTLEQAQCVSEQNEVDLQPLNLGLVAAFYYVKVNTI--ELFNR 1897 Query: 557 VLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGA 592 L P + +A + E R + TL Sbjct: 1898 SLTPTCKRRALLEILAASSEFSTLPLRPGEEGTLKG 1933 >UniRef50_Q9UT24 Pre-mRNA-splicing factor brr2 n=5 Tax=Fungi/Metazoa group RepID=BRR2_SCHPO Length = 2176 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 133/602 (22%), Positives = 225/602 (37%), Gaps = 73/602 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYAL 66 LP+ FL + +Q + +A + E+ L+ APTG+GKT A L L Sbjct: 503 IKELPEWSH----QAFLNT-QSLNRIQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCIL 557 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + L + ED + +I+YI+P+KAL ++ N L T N+ Sbjct: 558 NELQKHLREDLSFNLQN--FKIVYIAPLKALVQEMVNNFSKRL------------TPYNI 603 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVA 185 RV TGD + +K + I++TTPE ++ + V VIIDEVH + Sbjct: 604 RVAELTGD---SQLTKQQISETQIIVTTPEKWDIITRKANDLSYVNLVRLVIIDEVHLLH 660 Query: 186 GSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 +RG L + R+ + +GLSAT+ + +DVA+FL D + + Sbjct: 661 D-ERGPVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLFYFDSTY 719 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P + G E + R + ++ ++F +SR Sbjct: 720 RP-----------CPLKQEFIGITEKTPFKRMQTTNEACYEKVMQ-HAGKNQVLIFVHSR 767 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGS 358 K + + + DAA E + ++ + HH Sbjct: 768 KETAKTARFIRDKALEEETIGHLLRSDAASREILRAEADSTSDENLKDLLPYGFAIHHAG 827 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVAS 408 + +E R +E G ++ +V+T++L G+++ A ++I QV +P LS Sbjct: 828 MRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQD 887 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ +GRAG Q +G+ L++ + +E F RL N Sbjct: 888 VLQMLGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRL---ADCLNAEV 944 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL--PRRVFDATLDMLSGRYPSGDFSAFR 520 L +D L Y R+ R+ + + + S + Sbjct: 945 SLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSVGPEYDDDKYLVQKRADLLHSAAILLEK 1004 Query: 521 PK-LVWNRETGILTARPGAQL---LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 K LV+NR++G LTA ++ VT +Y+ LL + RV + Sbjct: 1005 CKLLVYNRQSGTLTATELGKVAASYYVTHNSM----AIYNRLLMQTTSFIELFRVFSFSD 1060 Query: 577 EM 578 E Sbjct: 1061 EF 1062 Score = 210 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 92/586 (15%), Positives = 181/586 (30%), Gaps = 102/586 (17%) Query: 26 AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 FK +Q Q ++ ++ + + AP GSGKT+ A L L +E Sbjct: 1361 NFKFFNKIQTQVFNSVYKTNDSVFIGAPNGSGKTVCAELALLHHWSQEDYG--------- 1411 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +YI+PI+ + + D + TG+ + Sbjct: 1412 --TAVYIAPIQEIVDRRYEEWYGKFSDLGD----------GKVLVKLTGERSQDLK---L 1456 Query: 145 RNPPDILITTPESLYLMLTSRARET--LRGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 D++ TP L+ R R ++ V+ I DE+ + G G + + R+ Sbjct: 1457 IQVADLIFCTPSQWDS-LSKRWRSMRSIQKVDFYICDELQLLGGFY-GPLYEIVISRIRY 1514 Query: 203 LL---HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 + + + +GLS +V +A D+ +LG P R + I + Sbjct: 1515 MAVQLEKNIRVVGLSVSVANARDLGEWLGTSPQCIFNFSPKDRPNPLTIHL--------- 1565 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 ++ I + + + + +STIVFT R +A++L L A Sbjct: 1566 ---QSFSITHFPSLMLAMSKPIYRSLKNFISQRKSTIVFTPDRKVAKQLAFDLVTFSMAD 1622 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 ++ E+ + +Q S S + I + + G ++ + Sbjct: 1623 EDEYLFSLMEN---EAFNKVEDAALQQSLKHGIAYISEITSSNDQNIVQYLYRHGLIKVL 1679 Query: 380 VATSSLELGIDMGAVDL----------VI-----------QVATPLSVASGLQRIGRAGH 418 +A + D+ VI ++ LQ +G Sbjct: 1680 IA-----------SRDVIYSLKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQMLG---- 1724 Query: 419 QVGGVSKG-------LFFPRTRRD-----LVDSAVIVECMFAGRLENLTPPHNPLDVLAQ 466 S G + T + ++ + +E L + Sbjct: 1725 --FTASIGSSELSQVILMTVTTKKEYYKKFLNEPLPMESHLQVWLHDAFV---SEISTQT 1779 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV-W 525 A+D L Y R+ + L ++ + LS + +L+ Sbjct: 1780 IESKQDAVDWLTWSYMYRRLVANPAYYGLQDITHESVSEFLSDLVETTMNDLSEARLITV 1839 Query: 526 NRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 + E A A + + I +++ L E + G + Sbjct: 1840 DDEDDSCVALNLAMIASHYGITYIT-MQTFALSLSERTKMKGLLEI 1884 >UniRef50_B5YNG2 RNA or DNA helicase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B5YNG2_THAPS Length = 2088 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 119/604 (19%), Positives = 214/604 (35%), Gaps = 70/604 (11%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYA 65 P + LP+ A K VQ + SE+ L+ APTG+GKT A L Sbjct: 382 PIAELPEWTHDAFA-----GMKMLNRVQSKMADVALRSSENILLCAPTGAGKTNVAMLSI 436 Query: 66 LDRLFREGGEDTREAHKR-KTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L+ +G E + +I+Y++P+KAL +V +N L Sbjct: 437 LNNDDEDGKHSKHEGMFDLSSFKIIYVAPMKALVQEVVKNFSKRLD------------PY 484 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVIIDEVHA 183 + V +GD+ ++ + +++TTPE ++ R + V+ VIIDE+H Sbjct: 485 GITVRELSGDSSL---TRQQISETQMIVTTPEKWDIVTRQGEGRAYTQLVKLVIIDEIHL 541 Query: 184 VAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + RG L + R+ + T + +GLSAT+ + +DVA FL + Sbjct: 542 LHDD-RGPVLESIVARVIRQVETTAEPVRLVGLSATLPNYADVATFLRVKPEKGMFFFDH 600 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + G E + R + ++F + Sbjct: 601 SYRPV-----------PLQMQYIGITERNAFRRFQLQNEICYEKATVQRKNGNQMLIFVH 649 Query: 301 SRGLAEKLTARLNELYAARLQRSPSI----AVDAAHFESTSGATSNRVQSSDVFIARSHH 356 SR K L ++ R Q S + A E + + ++ F HH Sbjct: 650 SRAETGKTAKALRDIALERDQLSLFVKEGGATQEILREEVATVKNADLKDVLSFGFAIHH 709 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSV 406 +++ R + E G + + T++L G+++ A ++I+ LS Sbjct: 710 AGMARADRELVEDLFADGHIGVLCCTATLAWGVNLPAHAVIIKGTQIYDPSKGRWAELSP 769 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 LQ +GRAG Q +G+ L + + VE ++ L N Sbjct: 770 LDVLQMLGRAGRPQYDNEGEGIIMTAHSELQYYLSLTNLQLPVESQM---IKTLPDHLNA 826 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDF 516 VL + A+D L Y R+ + + + + R + + Sbjct: 827 EVVLGTIQTISEAVDWLSYTFLYVRMLKNPNLYGISDKAASEDPTLKHRRMDLAHTAACM 886 Query: 517 SAFRPKLVWNRETGILTARPGAQLL--AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGEL 574 + ++R +G L + P ++ S ++ +YS L R+ + Sbjct: 887 LERSHLVRYDRRSGALQSTPLGRIASQYYISHSSM---ALYSRHLRPNMADIDLLRLFSM 943 Query: 575 DEEM 578 E Sbjct: 944 SGEF 947 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 90/578 (15%), Positives = 186/578 (32%), Gaps = 82/578 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLR--AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAA 61 P P S+L + F + F + +Q QT+H ++ ++ LV AP+GSGK+ A Sbjct: 1230 PLPISVLGET-------AFTKLYNFAEFNPIQTQTFHHLFKTDKNCLVCAPSGSGKSACA 1282 Query: 62 FLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 + L + + +YI+P + + + + + I Sbjct: 1283 EFAIMRMLVND-----------PNGKCVYIAPKEEIAFNTFSDWKTRFGSILR------- 1324 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDE 180 +V TG+ + I++ T + + R R+ ++ + I+D+ Sbjct: 1325 ---GGQVVQLTGEVTPDLK---FIAEARIIVCTAKQWDAISRRWRQRKAVQAITLCIVDD 1378 Query: 181 VHAVAGSKRGAHLALSLERLDALL--------HTSAQRIGLSATVRSASDVAAFLGGDRP 232 +H + G G + + + R+ + + IGL A++ +A +V ++G Sbjct: 1379 IHFLGGDA-GPTMEVIISRMRFISTQKQQKEDSPQLRMIGLGASLANAREVGEWMGVSSK 1437 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 P +R + I + + AGR ++ + ++ Sbjct: 1438 GLFNFSPKVRPIPLEI------------YFHSFDQSNFAGRLMAMGKPVYNAVMR-HSEG 1484 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS---NRVQSSDV 349 + +++F SR A+ L Y + ++ + E A +Q Sbjct: 1485 KPSLIFVPSRRQAQLTAIDLMT-YHQSIDGDTFLSKETNALEIADVAACLREPALQQVTS 1543 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV--------- 400 H + + + G L +V + I + A +VI Sbjct: 1544 SGIGFLHDGMVESDWEQILGLYRKGSLTVLVCPVDICWKIKVMAHLVVIMGTETFDGRER 1603 Query: 401 -ATPLSVASGLQRIGRAGHQ-VGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGRLEN 453 +A L +G A Q + K + T + L+ + VE L Sbjct: 1604 RYVDYPIADLLHMMGMASRQAIDTCGKCVIMCHTPKKEHLKKLLYDPLPVESHLDHYLH- 1662 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 N V + A+D + Y R+ + + +L + +S + Sbjct: 1663 --DHFNSEIVTKTISCMQDAVDYITWTLLYRRLSKNPNYYNLQGTSNVHLSEHISEMVET 1720 Query: 514 GDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI 549 K + G ++ + TI Sbjct: 1721 VLGDLEVSKCCQLTDDGDVSPLNLGMIAAYYYVQYETI 1758 >UniRef50_B9WF65 Pre-mRNA-splicing helicase, putative n=4 Tax=Candida RepID=B9WF65_CANDC Length = 1985 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 116/577 (20%), Positives = 213/577 (36%), Gaps = 66/577 (11%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLY 64 P S LPD A + +Q + + A +++ L+ APTG+GKT A L Sbjct: 354 LPISTLPDWAQEA---FPRNETTTFNRIQSKIYSQAFETDNNLLICAPTGAGKTNVAMLT 410 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L + + K +I+YI+P+KAL + R Q L Sbjct: 411 VLRTIENFRHNG---HIQLKNFKIVYIAPLKALVQEQMREFQRRLTA-----------TY 456 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAV 184 + V TGD+ K I++TTPE ++T + ++ V+ VIIDE+H + Sbjct: 457 GIVVNELTGDSSLS---KQQIAETQIIVTTPEKWD-IITRKDPSYVKLVKLVIIDEIHLL 512 Query: 185 AGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 +RG L + R + +GLSAT+ + +DVA F+ +P + A Sbjct: 513 HD-ERGPVLESLVSRAIRKSETTGFDIRIVGLSATLPNYADVAKFIRA-KPEGLFYFDAS 570 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P + V G E R ++ + + H I+F +S Sbjct: 571 YRP-----------CPLEQVYIGVKEQKAIKRIAAMNEACYDRMYQSLQDHHQLIIFVHS 619 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R L E + V + + ++++++ HH ++K Sbjct: 620 RKETFTTAKYLMEKLDIDIVEQE--GVKEILKQESESMSNSKLKEVIPQGFGIHHAGLTK 677 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV---ATP-------LSVASGLQ 411 + R+ E G LR +V+T++L G+++ A ++I+ +P LS LQ Sbjct: 678 QDRSTVEDLFAQGHLRVLVSTATLAWGVNLPAHTVIIKGTETYSPESGTWVQLSPQDILQ 737 Query: 412 RIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLA 465 +GRAG + +G+ +++ + +E + L + V Sbjct: 738 MLGRAGRPRYDKNGEGIIITSQDEVQYYLAILNQQLPIESQL---IHKLVDNISAEVVSG 794 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR-RVFDATLDMLSGR----YPSGDFSAFR 520 T ++ L ++ R+ R+ + F + + R Y + Sbjct: 795 SITTIEEGIEWLSYTYFFVRMLRSPALYGVEATYDFKIDPTLYNRRADLIYTAFCILHEN 854 Query: 521 PKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMY 555 +V+N G + + ++ + TI G Sbjct: 855 KLIVYNAALGSVASTELGKIASHFYINFETINLYGKM 891 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 80/514 (15%), Positives = 159/514 (30%), Gaps = 96/514 (18%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F +Q T+ SE + + + G GKT+ A L L+ Sbjct: 1205 FTHFNKLQSSTFDAIYNSETNVFIGSSKGDGKTVLAELAILNHWANH------------K 1252 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 RI+YI+P ++ L + T T Sbjct: 1253 GRIVYINP----CQELVDKLFKKWSTFFSSFEKEINVLSGNLREDLT-----------TV 1297 Query: 146 NPPDILITTPESLYLML-TSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 N +++ TPE + + R+ R ++ I D++H V H + + R+ L Sbjct: 1298 NQTQLVLATPEQFNCLSKRWKTRKAFRSIDLFIWDDLHLVGSD---VHYEMLVTRVRMLT 1354 Query: 205 HT----SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSS 260 + + IGLS+ V ++ D+A ++G + T P R +I + Sbjct: 1355 SQWDDYALRIIGLSSPVLNSRDIAEWIGVAKSETYNFAPLSRENKITEI----------- 1403 Query: 261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRS-TIVFTNSRGLAEKLTARLNELYAAR 319 + P L +V TI+F S A ++ + E A+ Sbjct: 1404 ------------KLSVDNPVKIYKDLAKVNSGLQNTIIFAPSYNHAFEMAHAMLENNQAQ 1451 Query: 320 LQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCV 379 R+ + + S + +++ + +S+ R I E+ +S + + Sbjct: 1452 EWRAVDL---LKLEKYISKIQNPLLKNLLPKGIAVFYSGMSRVDRLIVERLFESKSIGVL 1508 Query: 380 VATSSLELGIDM----G-AVDLVIQVAT----------PLSVASGLQRIGRAGHQVGGVS 424 T +D A ++ + + + +G Sbjct: 1509 FCT------VDTCKFAPVANNVFVAGTRIYDGHEHRFLDYPLNDLYEMLG----CCQDGG 1558 Query: 425 KGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQV 479 + ++ L++S + VE + L ++ Q+ L Sbjct: 1559 VVHIYTTSQMVEFYSSLLNSGLAVESLLPNSLHEFFMDAAANGIIKQRQNCIDV---LTF 1615 Query: 480 DEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS 513 +Y R+ + + DL + LS S Sbjct: 1616 TFFYRRLLKNPSFYDLKEVSNNGISTYLSELIES 1649 >UniRef50_C5DN54 KLTH0G14278p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DN54_LACTC Length = 2173 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 115/576 (19%), Positives = 209/576 (36%), Gaps = 69/576 (11%) Query: 2 ADNPDP-SSLLPDVFSPATRDWFLRAFKQ-----PTAVQPQTWHVAA-RSEHALVIAPTG 54 P L+P P W AF +Q + + +A E+ L+ APTG Sbjct: 481 PSRPSENFDLVPISALPV---WAKGAFPSNEMTNFNRIQSEVYPMAFGNDENMLICAPTG 537 Query: 55 SGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD 114 SGKT A L L R+ + + K+ +I+YI+P+KAL + R Q L Sbjct: 538 SGKTNIAMLTVL-RVLSHHMSKNKGSFDLKSFKIVYIAPLKALVQEQVREFQRRL----- 591 Query: 115 ERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGV 173 ++VG TGD+ ++ +L++TPE ++ + V Sbjct: 592 -------VSYGIKVGELTGDSSL---TRQQIADCTVLVSTPEKWDIVTRKASGNDYSSLV 641 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERLDA--LLHTSAQRIGLSATVRSASDVAAFLGGDR 231 E +IIDE+H + +RG L + R + + LSAT+ + SDVA FL Sbjct: 642 ELLIIDEIHLLHD-ERGPVLEGIVARSLRNIFSKERLRIVALSATLPNYSDVARFLRVPH 700 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 T + R ++ G E + + ++ +L+ V + Sbjct: 701 CNTFYFDSSFRP------------CPLAQQFCGITETTGIKKINAMNQACYDKLLEVVQQ 748 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQ----RSPSIAVDAAHFESTSGATSNRVQSS 347 IVF +SR + L + R A+ + Sbjct: 749 GHQAIVFVHSRKDTVRTATWLKNKLIEEEKIPLFRKSEPGSREILRREAENASDKHLADL 808 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP- 403 + HH ++K R+++E G L +V+T++L G+++ A ++I+ + +P Sbjct: 809 LLHGFGIHHAGLTKFDRSLSEDLFADGLLSVLVSTATLAWGVNLPAHAVIIKGTDIYSPE 868 Query: 404 ------LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRL 451 LS LQ +GRAG + +G+ ++ +++ + +E + Sbjct: 869 KGTWTRLSPQDVLQMLGRAGRPRYDTFGEGIIITQSTSVQYYLAMLNQQLPIESQL---I 925 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRV--FDATLDMLSG 509 L N VL T A+D L Y R+ + + +D L+ Sbjct: 926 SKLADNLNSEIVLGNITSRKEAVDWLGYTYLYVRMLGSPELYGIQGDTVSYDKALNGYRN 985 Query: 510 RYPSGDFSAFRP--KLVWNRETGILTARPGAQLLAV 543 +++ G + ++ + Sbjct: 986 ILAHSALQVLSDSRLTLYDAVEGSVKPTELGRIASY 1021 Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats. Identities = 76/525 (14%), Positives = 167/525 (31%), Gaps = 81/525 (15%) Query: 5 PDPSSLLPD---VFSPATRDWFLRAFK--QPTAVQPQTWHVAARS-EHALVIAPTGSGKT 58 P P+ LL S D F A +Q Q + + E+ L+ A G+G+ Sbjct: 1332 PAPTPLLDLERVSVSELCSDEFESAINLIHFNKLQSQVFPTLYETNENVLIGAAPGNGRA 1391 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 + A L + +R +++ P + L + +RR Sbjct: 1392 VMAELALFK------------LWRHAGNRAVFVCP----SENKIEVL------LKSWQRR 1429 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETV 176 + T D + +++ TP L +++ + R+ ++ +E + Sbjct: 1430 FSSLAGGKSINKFTEDNLVNLK---LLGESHLILCTPSQLD-LVSRKWKQRKNVQKIELL 1485 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 I+D+ H V GA + R+ + L T + + LS V ++ D ++G + Sbjct: 1486 ILDQAHLVGNGLPGAVYENIISRMTFISAQLETKLRIVALSNPVANSRDFGEWMGVRKEN 1545 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 P+ R ++I + + + Sbjct: 1546 IFNFSPSDRGNALQIQIQSTEQYLNHRYLARKFVWPQFQDLQLTNEKPRRLV-------- 1597 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 VFT+SR + + + AA+ P + +S + + + Sbjct: 1598 ---VFTSSRKHCVETVLEIMKTGAAQDFE-PLAKGSPIFDNLDAKMSSKMLSEAASWKIG 1653 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVAT--SSLELGIDMGAVDLVIQVAT--------- 402 H ++ ++R ++ G L +V + S E G + A +++ + Sbjct: 1654 CLHAGMTSKERDTMKKLFADGGLNLLVVSREESYE-G--LKANSVILLGTSYYEGKEHRY 1710 Query: 403 -PLSVASGLQRIGRAGHQV----GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE----- 452 ++ + I +V ++K L F +++ + E + +E Sbjct: 1711 VDYTMNQMQEMI-----KVACLSPSMNKALVFTSPKKNEYYKKFLSEPL---PVESFMYY 1762 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 +L + +D L +Y R+ + + Sbjct: 1763 HLPDAISCEISTGVVASKQDCIDWLTYSLFYRRLYGNPSFYGVKD 1807 >UniRef50_D2UY12 U5 snRNP-specific spliceosomal protein n=1 Tax=Naegleria gruberi RepID=D2UY12_NAEGR Length = 2057 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 124/593 (20%), Positives = 220/593 (37%), Gaps = 71/593 (11%) Query: 21 DWFLRAFK---QPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGED 76 +W +AF + AVQ + A S E+ L+ APTG+GKT A L L + E Sbjct: 386 EWSHKAFPNMVKLNAVQSIIFKSAFYSPENLLICAPTGAGKTNVAVLTMLHEIGLHMDES 445 Query: 77 TREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 +++YI+P+KAL +V NL LK N+ V TGD Sbjct: 446 FDNLIDLD-FKMIYIAPMKALVQEVVGNLSERLK------------PYNIVVQELTGD-- 490 Query: 137 AQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVAGSKRGAHLAL 195 + +K + I++TTPE ++ S R + V+ +IIDE+H + +RG L Sbjct: 491 -RNMTKQQIDETQIIVTTPEKWDIVTRKSGDRTYVEKVKLIIIDEIHLLHD-ERGPVLES 548 Query: 196 SLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPV 252 + R + + +GLSAT+ + DVA FL + R Sbjct: 549 IVARTIRQQESTRQNIRLVGLSATLPNYKDVATFLRVKPDNLFYFDSSFRP--------- 599 Query: 253 ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARL 312 + G E R + + +++ + IVF +SR K L Sbjct: 600 ---CPLDQYYIGVNEKKPFKRHKLMNEIVYNKVVE-IAGKHQIIVFVHSRKDTYKTAKAL 655 Query: 313 NELYAARLQRSPSIAVDAAHFESTSGATSNR-----VQSSDVFIARSHHGSVSKEQRAIT 367 ++ + +A E A+ ++ F HH +++ R + Sbjct: 656 RDMAIENDTIGKFVKQGSATSEILKEASQKDANGAELKELLSFGVGIHHAGMTRNDRTLV 715 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSVASGLQRIGRAG 417 E L+ +V+T++L G+++ A ++I QV +P LS +Q IGRAG Sbjct: 716 EDLFDDERLQVLVSTATLAWGVNLPARRVIIKGTQVYSPEKGDWTELSALDVMQMIGRAG 775 Query: 418 H-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 +GL L++ + +E F +++L N VL Sbjct: 776 RFPRDSRGEGLIVTTQSHLQYYLALLNQQLPIESQF---IKSLPDNLNAEVVLGTVQNID 832 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFRPKLVWNR 527 A++ L Y R+ R + + + ++ R Y + + +++ Sbjct: 833 EAINWLGYTYLYVRMLRNPLLYGITKEDVEHDKNLYHWRRDLVYSAALILEKNGLIKFDK 892 Query: 528 ETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEM 578 +G ++ + +I ++ L R+ L +E Sbjct: 893 RSGDFQPTDLGRVASHYYVTHKSI---ATFNNNLKPNLSDIELFRLFSLSDEF 942 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 107/566 (18%), Positives = 207/566 (36%), Gaps = 63/566 (11%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAF 62 P S L + + +Q Q + SE L+ AP GSGK+L Sbjct: 1223 PPLEISALKNGKYEQLLS--NMGVYKFNPIQTQVFRSVYHSEDSVLIAAPGGSGKSLCGV 1280 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L + + + S+ +YI+ I ++ ++ + I Sbjct: 1281 LAIMKMF-----------NDHENSKCVYIAAIPSVANKREKKWISLFEQI---------- 1319 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDE 180 RV TG + + DI+I+TPE M + + R++L V+ V+ DE Sbjct: 1320 --GKRVVNLTG---NLAKDMILFEQGDIIISTPEQFD-MFSRKWKARKSLSNVKLVVADE 1373 Query: 181 VHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +H + G G + + + R+ + L T+ + +GLSA++ +A DVA ++G + Sbjct: 1374 LHMIGGEV-GPIIEVVISRIRYMSSQLETNIRIVGLSASILNAKDVADWIGTKKECCFNF 1432 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 P R + I + G + S+ R+ ++ ++ + TI+ Sbjct: 1433 HPRYRSIPLEINI------------QGFTQSSYNARQVAMSKPAY-KVIKQKSGGEQTII 1479 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHG 357 FT+S A +++ L + + + + +A + S+ ++ F +H Sbjct: 1480 FTSSPKQASFISSDLIDHLSNDINSKIFVGDSSAINHAIGSVDSSALKEVLTFGIAFYHE 1539 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVA 407 +++K + I E+ +G ++ +V T + G++ + ++I T S+ Sbjct: 1540 TLTKNDKQIVEELYSTGVIKVLVVTHQMCWGMEQKSKLVIIMGTEYYNGKEHRYTDYSII 1599 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRT-RRDLVDSAVIVECMFAGRLEN-LTPPHNPLDVL 464 +Q + R+G V S F R+D + + L++ L P N Sbjct: 1600 DMVQMMSRSGRIAVDKDSTCYIFCAASRKDYLLKFLYEPFPVESHLDHFLYDPLNAEISS 1659 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV 524 A+D L Y R+R+ + +L D LS S + + Sbjct: 1660 KIIENKQGAVDYLTWTFLYRRIRKNPNYYNLSGTTKIHLSDYLSELVESSLEELQKCNCI 1719 Query: 525 WNRETGILTARPGA-QLLAVTSGGTI 549 + I G TI Sbjct: 1720 LVEDDEITAMNLGTIAAHYYVKHSTI 1745 >UniRef50_B7G2L8 Predicted protein n=2 Tax=Eukaryota RepID=B7G2L8_PHATR Length = 2189 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 118/609 (19%), Positives = 221/609 (36%), Gaps = 76/609 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYAL 66 LP + ++ VQ + SE+ L+ APTG+GKT A L + Sbjct: 489 IDELPSWTH-----AAFKGMEKLNRVQSKLCDVALRSSENLLLCAPTGAGKTNVACLTMM 543 Query: 67 DRLFREGGEDTREAHKRKT-------SRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 + L + + + +I+Y++P+KAL +V +N L+ Sbjct: 544 NILGQYRRDRQVDDDPDAKDSFDLSSFKIVYVAPMKALVQEVVKNFSERLED-------- 595 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR-ARETLRGVETVII 178 + V +GD+ + + +L+TTPE ++ R + V+ VI+ Sbjct: 596 ----YGVTVRELSGDSSLS---RQQISETQLLVTTPEKWDVVTRQGEGRAFTQLVKLVIV 648 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTV 235 DE+H + +RG L + R+ + T + +GLSAT+ + +DVA FL D + Sbjct: 649 DEIHLLHD-ERGPVLESIVARIIRQVETTSEPVRLVGLSATLPNYTDVATFLRVDHNKGL 707 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 P + G E + R +++ Sbjct: 708 FFFDHSYRPV-----------PLQMQYIGLTERNAFRRFQLQNEICYEKAIEQRRNGNQM 756 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAV----DAAHFESTSGATSNRVQSSDVFI 351 ++F +SR K L +L R + + + E +S + ++ + Sbjct: 757 LIFVHSRAETGKTAKALRDLALERDESTNFVREKGATQEILREESSAVKNADLKDVLPYG 816 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA---------- 401 HH +++E R + E + +V T++L G+++ A ++I+ Sbjct: 817 FAIHHAGMAREDRELVEDLFADRHIAVLVCTATLAWGVNLPAHAVIIKGTQIYDPSKGRW 876 Query: 402 TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLT 455 LS LQ +GRAG Q +G+ + L + + VE ++ L Sbjct: 877 AELSPLDVLQMLGRAGRPQYDSEGEGIILTQHSELQYYLSLTNLQLPVESQL---IKTLP 933 Query: 456 PPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--DATL--DMLSGRY 511 N VL + A+D L + R+ + + F D TL L + Sbjct: 934 DHLNAEIVLGTIQTISEAVDWLGYTFLFVRMLQNPNLYGISETSFLDDRTLKKRRLDLAH 993 Query: 512 PSGDFSAFRPKLVWNRETGILTARPGAQLL--AVTSGGTIPDRGMYSVLLPEGEEKAGSR 569 + + ++R++G L A P ++ S ++ +YS + Sbjct: 994 SAASILEKSHLVRYDRKSGALQATPLGRISSQFYISHSSM---AVYSRHMRSNMSDIELL 1050 Query: 570 RVGELDEEM 578 R+ L E Sbjct: 1051 RLFSLSGEF 1059 Score = 249 bits (635), Expect = 1e-63, Method: Composition-based stats. Identities = 95/571 (16%), Positives = 177/571 (30%), Gaps = 77/571 (13%) Query: 10 LLPDVFS-PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALD 67 LLP A + F +K+ +Q Q +H ++ ++ LV AP+G+GK+ A L Sbjct: 1343 LLPSALGVSALSEIFA--YKEFNPIQTQVFHELFKTDKNCLVCAPSGAGKSTCAVFAVLR 1400 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 L +YI+P A+ ++ I Sbjct: 1401 MLTTNADGV-----------CVYIAPTDAIADRTFTEWRLLFGRILPSS----------S 1439 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVA 185 + +G+T + + +++++ + M++ R R+ ++ V +I DE+H + Sbjct: 1440 IVRLSGETGPDLK---LLSQGKVVVSSAKQWD-MVSRRWKQRKAVQNVALMIFDELHFLG 1495 Query: 186 GSKRGAHLALSLERLDALLH--------TSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 G G L + + R ++ + + +GLSA++ +A DV ++G Sbjct: 1496 GII-GPTLEVVISRTRYMIGQSEDGKTVANMRIVGLSASLANARDVGEWMGVSGKSLFNF 1554 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 R + I + +++ R ++ + + + + + IV Sbjct: 1555 SSKARPMPLEIFF------------QSFEQANYSARLMAMAKPVFSAVERHIGEG-TAIV 1601 Query: 298 FTNSRGLAEKLTARLN--ELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSH 355 FT SR A+ L E S +Q Sbjct: 1602 FTPSRRQAQLTAIDLMTFRDGQGLGSYVGKSVDTLTLAEIASTLREPALQQVVTNGIGFL 1661 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT----------PLS 405 H + SG LR +V + + I ++I Sbjct: 1662 HAGMIDSDWNTVVDLYNSGALRILVCPTDVCWKIRCVGRLVIIMGTEVYDGREGRHLDYP 1721 Query: 406 VASGLQRIGRAGHQVGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGRLENLTPPHNP 460 V L IGR H K + + L+ V +E L P N Sbjct: 1722 VMDILHMIGR--HDPRSSGKCVLLCHAPKKDYLKKLIYDPVPIESHLDSYLH---DPLNA 1776 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 V + A+D L Y R+ + + L + LS + Sbjct: 1777 EVVTKTVSSMQDAIDYLTWSFLYRRLPQNPTYYGLRGTSNVFLSEYLSEMIETVIGDLEE 1836 Query: 521 PKLVWNRETGILTARPGAQL--LAVTSGGTI 549 K E G ++ + TI Sbjct: 1837 SKCCSMSEEGDISPLNLGMIAAYYYVQYRTI 1867 >UniRef50_C5DRW4 ZYRO0B11858p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DRW4_ZYGRO Length = 2155 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 114/600 (19%), Positives = 215/600 (35%), Gaps = 66/600 (11%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYA 65 P S+ P A + A+Q + + V R ++ L+ APTG+GKT A + Sbjct: 480 PISVFPSWAQNAFPSAET---ESLNAIQSKLYPVTFGRDDNVLLCAPTGAGKTNVAMMAI 536 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + +T K +++YI+P+KAL + Q L + Sbjct: 537 LRTISNHINVETGRLT-SKNFKVVYIAPLKALVQEQVSEFQRRLSYL------------G 583 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAV 184 ++V TGD+ + +LI+TPE ++ ++ V +IIDE+H + Sbjct: 584 IKVVELTGDSNLN---RQQLLEAQVLISTPEKWDVITRKADESSFVQSVRLMIIDEIHLL 640 Query: 185 AGSKRGAHLALSLERLDAL--LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + RG + + R + +GLSAT+ + DV+ FL R Sbjct: 641 HDA-RGPVIEAIVSRALQAKTFQEPPRLLGLSATLPNYQDVSRFLRVPDNGLFYFDSTYR 699 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 +S G E S + ++ L+ V + I+F +SR Sbjct: 700 P------------CPLSQQFCGVTEKSSLKKLNAMNETCHEKTLEAVKQGHQVIIFVHSR 747 Query: 303 GLAEKLTARLNELYAARLQ----RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 + L E ++ R A + +++ HH Sbjct: 748 KETARTALWLMEKFSENDNLGLIRKSDPASGKILETESENVQDGQLKKIIRAGIGIHHAG 807 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVAS 408 ++K R+++E G L+ +V+T++L G+++ A ++++ PLS Sbjct: 808 LTKTDRSLSEDLFADGLLQVLVSTATLAWGVNLPAHTVIVKGTDVYSPESGSWEPLSPQD 867 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ +GRAG + +G+ +++ + +E + + N Sbjct: 868 LLQMLGRAGRPRYDTTGEGIIITNQTDVQFYLAVLNQQLPIESQL---VSKIVDNLNAEV 924 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR-RVFDATLDMLSGRYPSG-DFSAFR 520 V +D L Y R+ + +P ++TL S Sbjct: 925 VAGNIQNRKHGVDWLTYTYLYVRMLMSPEIYKVPDPEKEESTLKYGEALIHSALAILHEE 984 Query: 521 PKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM--YSVLLPEGEEKAGSRRVGELDEEM 578 +V++ E+G + A ++ + I M Y + + + RV L +E Sbjct: 985 NLVVYDAESGDVEATELGRISSYF---YINHTSMQVYDTEITQHSTQIDLFRVISLSDEF 1041 Score = 159 bits (402), Expect = 9e-37, Method: Composition-based stats. Identities = 80/594 (13%), Positives = 167/594 (28%), Gaps = 90/594 (15%) Query: 5 PDPSSLLPDVFSPATR---DWFLRAFKQ--PTAVQPQTWHVAARS-EHALVIAPTGSGKT 58 P P+ L + P + + F +AF Q Q + + ++ LV A GSGKT Sbjct: 1318 PAPTPLADMLLMPISDLENEEFTKAFDYENFNKFQSQVFQPLYTTNDNVLVGASKGSGKT 1377 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 + A L L+ ++ R LYISP L + R Sbjct: 1378 VMAELAILNHW------------RQNKGRALYISP----HQYQIDQLSK------SWKER 1415 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVI 177 V D R +++ TPE L+ R R ++ +E I Sbjct: 1416 FSALAGGKSVNKLGSDLNYNLR---IIAQSHLILATPEQFDLVSRRWRNRRNIQRIELAI 1472 Query: 178 IDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 D+V ++ GA + R+ + L + + L + + D+ ++G R Sbjct: 1473 YDDVQEISNGMAGAVYETIISRMTFISTQLEKETRFVALGSCFANGRDLGEWIGASRNNI 1532 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 P + + I + + + + + + I Sbjct: 1533 FNFSPQEKLYPMEIHLHAFETTQSTILNIPMAKYAFDFAQEHQDDNI------------- 1579 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 ++F+ SR + + A + T ++ S Sbjct: 1580 -LIFSPSRKSCIDSSLIFIQYAFENN-LDLLRAEEEDLNSYLKAVTDGALKKSLTHGIGM 1637 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVAT-------SSLELGIDMGAVDLVIQV------- 400 + ++ + RA+ ++ G L ++ T + +VI Sbjct: 1638 IYAEMNAKDRAVVKKLYDYGALSILLVTKDCCHDCP--------PSNRVVILGTQYYEGK 1689 Query: 401 ---ATPLSVASGLQRI----GRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLE- 452 S L+ + G+ ++ L + + E + +E Sbjct: 1690 EHRYVDYSANQLLEMVNTTKGKT---KDDTTQALVLTNQKMKDYYKKFLSEGL---PIES 1743 Query: 453 ----NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 +L + +D + +Y R+ + + L+ Sbjct: 1744 FMFFHLYDALISEINTSVIQTKQDCVDWIAYTFFYRRIHGNPSFYGVKDVSAYGISAYLT 1803 Query: 509 GRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEG 562 + + R T ++++ + I + S Sbjct: 1804 ELVENTLRGLQECDFIELRTNDSDTDEDIEEIISPLNACAISSQHNTSFFTMHT 1857 >UniRef50_A1DP28 DEAD/DEAH box DNA helicase (Mer3), putative n=7 Tax=Trichocomaceae RepID=A1DP28_NEOFI Length = 1449 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 113/593 (19%), Positives = 206/593 (34%), Gaps = 60/593 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDR 68 LPD + F AVQ + + +++ + ++ APTGSGKT+ L Sbjct: 230 ELPDSYRSIFH------FPVFNAVQSKCFQRVYKTDDNIVLAAPTGSGKTVIMELAICRL 283 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L K + +++Y +P K+L ++ R+ + L+ Sbjct: 284 L---------STLKDERFKVVYQAPTKSLCSERFRDWNRKF------------MSLGLQC 322 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAG 186 TGDT + + I++TTPE M ++ V+ +IDE+H + Sbjct: 323 AELTGDTDHTQLRSV--QNSQIIVTTPEKWDSMTRKWKDHARLMQLVKLFLIDEIHILKE 380 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 + RGA L + R+ ++ + + LSATV ++ D+A++LG + T + PA R Sbjct: 381 A-RGATLEAVVSRMKTF-GSNVRFVALSATVPNSEDIASWLG--KDATNQHVPAHREHFG 436 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 PV V S + + + S P IL + ++F +R Sbjct: 437 EDFRPVKLQKFVYGYQSHSNDFAFDKLCSSKLPD----ILGTHSCRKPIMIFCCTRNSCV 492 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L L++ + V H E+ + ++++ + HH + R Sbjct: 493 ATAKELARLWSMTNPPARLWKVSGKHLEAH----NADLRTTLMAGVAFHHAGLDPADRHT 548 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAGH 418 E G + + TS+L +G+++ ++I+ S +Q +GRAG Sbjct: 549 VESGYLQGHVAVICCTSTLAVGVNLPCHLVIIKGTVGWQDGGCKEYSDLEMMQMLGRAGR 608 Query: 419 QVGGVSKGLFFPRTRRDLVDSA----VIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 S + TR+D V E + + NL N L T +A+ Sbjct: 609 PQFDDS-AIAVIMTRKDRVQHYEKLVSGCETLESCLHLNLIDHLNAEIGLGTVTDVDSAV 667 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 L + R+RR L D + + D + + + T Sbjct: 668 RWLAGTFLFVRLRRNPKHYQLKEGATKDDEDEMLRQICEKDIRLLQETGLVASDRLKSTP 727 Query: 535 RPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 A T+ L + E +E + + Sbjct: 728 FGDAMARYYVRFDTM---KTLLALKSHATVSQVLSAIAEAEEFREIRLKAGEK 777 >UniRef50_B6HP67 Pc22g02150 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HP67_PENCW Length = 1512 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 114/578 (19%), Positives = 212/578 (36%), Gaps = 54/578 (9%) Query: 27 FKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F A+Q +++H S ++ ++ APTGSGKT+ L + K + Sbjct: 214 FPLFNAIQSKSFHSVYNSNDNIVLSAPTGSGKTVVMELAICRLV---------NTLKDER 264 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 +++Y +P K+L ++ R+ + +NL+ TGDT + + Sbjct: 265 FKVVYQAPTKSLCSERFRDWNSKF------------SSLNLKCAELTGDTDHMQLRNV-- 310 Query: 146 NPPDILITTPESLYLMLTSRARETL---RGVETVIIDEVHAVAGSKRGAHLALSLERLDA 202 I+ITTPE M T + ++ + + V+ +IDEVH + + RGA L + R+ Sbjct: 311 QASQIIITTPEKWDSM-TRKWKDHMKLMQLVKLFLIDEVHILKET-RGATLEAVVSRMKN 368 Query: 203 LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVA 262 + ++ + + LSAT+ ++ D+A +LG + T + PA R PV V A Sbjct: 369 I-GSNVRFVALSATIPNSEDIATWLG--KDATNQHVPAHREHFGEEFRPVMLKKVVYGYA 425 Query: 263 SGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQR 322 S + + GS P ++ + ++F +R + L L+ Sbjct: 426 SSLNDFAFDKVCGSKLPE----VIGMHSCKKPILIFCCTRNSSLATAKELARLFTLTNPP 481 Query: 323 SPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT 382 + E+ + ++++ V HH + R E + G + + T Sbjct: 482 ARLWKEPKKRLEAH----NEDLKTTLVAGVAFHHAGLGPADRHTVETGFREGNISVICCT 537 Query: 383 SSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTR 433 S+L +GI++ ++I+ S +Q +GRAG Q + + R Sbjct: 538 STLAVGINLPCHLVIIKNTVSWQDGGCKEYSDLEMMQMLGRAGRPQFDDSATAVILTRKE 597 Query: 434 R-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAP 491 R + V L NL N L + +A+ L + R+RR Sbjct: 598 RVAHYERLVQGSESLESCLHLNLIDHLNAEIGLGNISDIESAVKWLAGTFLFVRLRRNPT 657 Query: 492 WKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPD 551 L D L + D R + E+ T A T+ Sbjct: 658 HYKLKEGANQEDEDELLRQICEKDIDLLRKCDLVEAESLSSTQFGDAMARYYIRFETM-- 715 Query: 552 RGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIIT 589 + L P+ + + +E + + + Sbjct: 716 -KVLLSLKPKPTLSETLNVIAQAEEFREIRLKAGEKLL 752 >UniRef50_C5FL91 ATP-dependent DNA helicase MER3 n=1 Tax=Microsporum canis CBS 113480 RepID=C5FL91_NANOT Length = 1443 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 117/594 (19%), Positives = 218/594 (36%), Gaps = 61/594 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDR 68 LPD F F A+Q +T+ + ++ ++ APTGSGKT+ L Sbjct: 211 ELPDRFRTIF------PFPVFNAIQSKTFSIIYHRVDNVVLSAPTGSGKTVIMELAICKL 264 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + K + +Y++P K+L ++ R+ + ++L+ Sbjct: 265 V---------SDLKDTRFKAIYLAPTKSLCSERCRDWRTKFA------------PLDLQC 303 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG---VETVIIDEVHAVA 185 TGDT + + I+ITTPE M T + ++ +R ++ V+IDEVH + Sbjct: 304 AELTGDTDQIQIRNV--QQASIIITTPEKWDSM-TRKWKDHMRLMQLIKLVLIDEVHILK 360 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA L + R+ ++ +++ + + LSATV ++ D+A++LG D T + PA R Sbjct: 361 EV-RGATLEAIVSRMKSV-NSNVRFVALSATVPNSEDIASWLGKDP--TNQHLPAHRERF 416 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V S + + + IL + + +VF +R A Sbjct: 417 GEEFRPVRLQKFVYGYQSNGNDFAF----DRVCEAKLPDILAKHSSKKPILVFCCTRNSA 472 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 + L +L+++ + + + HH + R Sbjct: 473 ITTSKNLAKLWSSANPPQRLW----RSPTKPVQVQNADLSGVVITGVAFHHAGLDTSDRH 528 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAG 417 E SG++ + TS+L +G+++ +VI+ + +Q +GRAG Sbjct: 529 AIETGFLSGQINVICCTSTLAVGVNLPCHLVVIKNTVSWQDGGCREYADLEMMQMLGRAG 588 Query: 418 H-QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + G+ R R + V L NL N L T +A+ Sbjct: 589 RPQFDDSAVGVILTRKERVAHYEKLVAGSEPLESCLHLNLIDHLNAEIGLGTVTDIESAI 648 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 L ++ R++R + L A + L R D + + + + Sbjct: 649 RWLLGTFFFVRLQRNPTYYKLKEGGNRADEEELLRRICENDLELLQENELVTLVAPLKST 708 Query: 535 RPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 G A T+ ++ L + + + + DE + + Sbjct: 709 ELGDAMARYYVKFDTM---RLFLSLPRKAKMSEILSVIAQADEFRDIRLKPGEK 759 >UniRef50_C6H6L0 Helicase family member n=2 Tax=Ajellomyces capsulatus RepID=C6H6L0_AJECH Length = 1510 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 112/594 (18%), Positives = 217/594 (36%), Gaps = 61/594 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDR 68 LPD F F+ A+Q + + + + + ++ APTGSGKT L Sbjct: 216 ELPDRFRSVF------PFQVFNAIQSKCFRPIYQGDSNFVLSAPTGSGKTAVMELAICRL 269 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + K +++Y +P K+L ++ R+ Q + ++L+ Sbjct: 270 V---------TNFKDCRFKVVYQAPTKSLCSERYRDWQHKF------------SSLDLQC 308 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL---RGVETVIIDEVHAVA 185 TGDT + +I+ITTPE M T + ++ + + V+ +IDEVH + Sbjct: 309 AELTGDTDHARLRNV--QNANIIITTPEKWDSM-TRKWKDHIKLMQLVKLFLIDEVHILK 365 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 + RGA L + R+ + ++ + + LSATV ++ D+ A+LG D T + PA R Sbjct: 366 ET-RGATLEAVVSRMKS-ADSNVRFVALSATVPNSEDIGAWLGKDP--TNQHLPAHRERF 421 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V S + + G+L++ + + T++F +R A Sbjct: 422 GEEFRPVKLQKFVYGYHSNGNDFAFDKAC----EARLPGVLEKHSKKKPTMIFCCTRNSA 477 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 + L +L+ + + + ++++ HH + R Sbjct: 478 IATSKYLAKLWTSTNPPNRLWNGPTR----PVAVQNPELRATISAGVAFHHAGLDACDRH 533 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAG 417 E SG++ + TS+L +G+++ ++I+ +Q +GRAG Sbjct: 534 AVENGFLSGQINVICCTSTLAVGVNLPCYLVIIKNTVSWQDNCCKEYPDLEMMQMLGRAG 593 Query: 418 H-QVGGVSKGLFFPR-TRRDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + R R D + V L L N L T +A Sbjct: 594 RPQFDDSAVAVILTRKERLDYYEKLVAGTEPLESCLHLKLIDHLNSEIGLGTVTDVESAT 653 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 L ++ R+R+ L + + + + + + E + + Sbjct: 654 RWLAGTFFFIRLRKNPARYKLKEAANRSDEEEMLKEICEENIRRLQECSLITSEEPLRST 713 Query: 535 RPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 G A T+ ++ L P+ + + + DE + + Sbjct: 714 EFGDAMARYYIKFETM---RLFLSLPPKAKMSEILSVIAQADEFSEIRLKAGEK 764 >UniRef50_B2AQ90 Predicted CDS Pa_4_4960 n=1 Tax=Podospora anserina RepID=B2AQ90_PODAN Length = 1381 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 128/557 (22%), Positives = 201/557 (36%), Gaps = 58/557 (10%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAFLYALD 67 LPD F F+ AVQ + + ++ + +V APTGSGKT L Sbjct: 131 EALPDKFRALF------PFEFFNAVQSKCFEAVYKTNNNVVVSAPTGSGKTAILELAICK 184 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G E +I+Y +P KAL + R+ + + L+ Sbjct: 185 LALDRGHE---------NFKIVYQAPTKALCAEKARDWEKKFGHMK------------LK 223 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVA 185 TGDT E ++ I++TTPE + R L+ VE +IDEVH + Sbjct: 224 CAELTGDTSQAEMRRV--GDASIIVTTPEKWDSITRKWQDHRRLLQLVELFLIDEVHILK 281 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA L + R+ + T+ + I LSATV ++ D+A +LG R T + PA+R Sbjct: 282 DV-RGATLEAVVSRMKTI-GTNVRFIALSATVPNSDDIAQWLG--RDHTNQHLPALRETF 337 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V E S P ++ + + +VF +R Sbjct: 338 GEEFRPVKLQKFVYGYECNGNEFILDKLLDSKLP----NLIARHSQQKPILVFCFTRKSC 393 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E + L E AAR A + S +Q HH + + R Sbjct: 394 ESTASLLAEYAAARPNTKLWPA-----PKGRIPVISRELQEIVKLGVAFHHAGLDVQDRG 448 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAG 417 EQ+ GEL + TS+L +GI++ +V++ S +Q +GRAG Sbjct: 449 AVEQSFLKGELGVICCTSTLAVGINLPCHTVVLKGTMGYADDKLQEYSDLEVMQMLGRAG 508 Query: 418 H-QVGGVSKGLFFPRTRRDL-VDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + + + V + + L NL N L A+A Sbjct: 509 RPQFDDSATAIILTKAGNKARYEKMVSGQEILESTLHLNLIEHLNSEIGLGTIHDLASAK 568 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFD-ATLDMLSGRYPSGDFSAFR-PKLVWNRETGIL 532 L R+RR + L + + +D D + + V + ET Sbjct: 569 KWLSGTFLSVRLRRNPSFYHLTGSNCNPSQIDAKLEEICERDIKQLQDAQCVTDNETFKS 628 Query: 533 TARPGAQLLAVTSGGTI 549 T A + T+ Sbjct: 629 TYYGRAMSKYMVEFSTM 645 >UniRef50_B8N1Z3 DEAD/DEAH box DNA helicase (Mer3), putative n=2 Tax=Eurotiomycetidae RepID=B8N1Z3_ASPFN Length = 795 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 112/592 (18%), Positives = 203/592 (34%), Gaps = 63/592 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDR 68 LPD + F A+Q + + + + + ++ APTGSGKT+ L Sbjct: 15 ELPDKYGSLFH------FPAFNAIQSKCFQSVYKGDDNIVLAAPTGSGKTVVMELAICRL 68 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L K + +++Y +P K+L ++ R+ + L+ Sbjct: 69 L---------NNLKDERFKVIYQAPTKSLCSERFRDWNRKFHSL------------GLQC 107 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAG 186 TGDT + + I+ITTPE + ++ V+ +IDEVH + Sbjct: 108 AELTGDTDYTQMRSV--QNSQIIITTPEKWDSVTRKWKDHARLMQLVKLFLIDEVHILKE 165 Query: 187 SKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 S RGA L + R+ + ++ + + LSAT+ ++ D+A +LG + T + PA R Sbjct: 166 S-RGATLEAVVSRMKTI-GSNVRFVALSATIPNSEDIATWLG--KDATNQHVPAHREHFG 221 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 PV V S + + S P IL + ++F +R + Sbjct: 222 EEFRPVRLQRFVYGYQSQGNDFAFDKMCSSKLPD----ILAMHSCRKPIMIFCCTRNSSV 277 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L L++ + + FE + + HH ++ R Sbjct: 278 ATAKELARLWSMSNPPARLWKGPSKSFEFNNIDLKS---------VAFHHAGLNPGDRQT 328 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAGH 418 E G++ + TS+L +G+++ ++I+ S +Q +GRAG Sbjct: 329 IENGFLQGQINIICCTSTLAVGVNLPCHLVIIKNTVGWLDGGCKEYSDLEIMQMLGRAGR 388 Query: 419 -QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMD 475 Q + + R R D + V L NL N L T +A+ Sbjct: 389 PQFDKDAVAVILTRKERVDYYERLVSGSESLESCLHLNLIDHLNAEIGLGNVTSVESAIR 448 Query: 476 ALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTAR 535 L + R+RR L D + + D + + E+ T Sbjct: 449 WLAGTFLFVRLRRNPTHYQLREGAKREDEDEMLRQICEKDIRLLQESNLVTTESLRSTQF 508 Query: 536 PGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 A T+ + L + + +E + + Sbjct: 509 GDAMARYYVRFETM---KTFLTLKRHATMSQILSVISQAEEFRDVRLKAGEK 557 >UniRef50_Q2GRG2 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2GRG2_CHAGB Length = 1300 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 120/551 (21%), Positives = 199/551 (36%), Gaps = 56/551 (10%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALD 67 LPD F ++ AVQ +++H + ++ ++ APTGSGKT L Sbjct: 58 QALPDKFRAIF------PYELFNAVQSKSFHTIYHTNDNVVIAAPTGSGKTAILELAICK 111 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G + +I+Y +P KAL ++ R+ + + NL+ Sbjct: 112 LALDRG---------NENFKIVYQAPTKALCSEKARDWEKKFGHM------------NLK 150 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVA 185 TGDT E ++ I++TTPE + R L+ VE +IDEVH + Sbjct: 151 CAELTGDTSQAEMRRV--GDASIIVTTPEKWDSITRKWQDHRRLLQMVELFLIDEVHILK 208 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA L + R+ + + + I LSATV ++ D+A +LG R T PA R Sbjct: 209 DV-RGATLEAVVSRMKTI-GANVRFIALSATVPNSDDIARWLG--RNHTTQQLPAHRETF 264 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V S + + P ++ + R + +VF +R Sbjct: 265 GEEFRPVKLQKFVHGFGSNSNDFIFDKFLDQKLPG----LISKYARGKPILVFCFTRKSC 320 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E A L + + R + V S +Q F HH + + RA Sbjct: 321 ESTAAMLADFASDRPDGNDMWPVPTQRV----PVVSRELQEIVRFGVAFHHAGLDPQDRA 376 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAG 417 EQ G+L + TS+L +GI++ +V++ S +Q +GRAG Sbjct: 377 TIEQNFLKGQLGVICCTSTLAVGINLPCHTVVLKGTVGFADDQLKEYSDLEVMQMLGRAG 436 Query: 418 H-QVGGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + R+ ++ V + + L NL N L +A Sbjct: 437 RPQFDDSATAIILTRSANKERYQKMVSGQEILESTLHLNLIEHLNSEICLGTIHNLPSAK 496 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFD-ATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 L R+RR + L + + +D D + + + Sbjct: 497 TWLGGTFLSVRLRRNPNYYRLTGETTNPSEVDDRLEEICERDIKQLQETKLVTDQDSFHC 556 Query: 534 ARPGAQLLAVT 544 G + Sbjct: 557 TEYGRAMSKYM 567 >UniRef50_B4ITW8 GE23129 n=1 Tax=Drosophila yakuba RepID=B4ITW8_DROYA Length = 1733 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 105/526 (19%), Positives = 188/526 (35%), Gaps = 65/526 (12%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 P LP P FK +Q + + A S E+ L+ APTG+GKT A L Sbjct: 462 QPVDKLPKYVQPVFE-----GFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLT 516 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 + + + ED + +I+Y++P+K+L ++ N L Sbjct: 517 MMREIGKHINEDGTINAQD--FKIIYVAPMKSLVQEMVGNFGRRLA------------CY 562 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHA 183 NL V TGD + ++ +++ TPE ++ R + V VIIDE+H Sbjct: 563 NLTVSELTGD---HQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHL 619 Query: 184 VAGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + +RG L + R + +GLSAT+ + DVA FL + Sbjct: 620 LHD-ERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDN 678 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + G E R + + ++ R+ +VF + Sbjct: 679 SYRPV-----------SLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRN-QVLVFVH 726 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHH 356 SR K + ++ + + +A E + ++ + HH Sbjct: 727 SRKETGKTARAVRDMCLEQDTLGSFLKEGSASMEVLRTEAEQVKNTELKELLPYGFAIHH 786 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSV 406 +++ R + E ++ +V+T++L G+++ A ++I+ LS Sbjct: 787 AGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSA 846 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 LQ +GRAG Q +G+ L++ + +E F + L N Sbjct: 847 LDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQF---ISKLPDMLNA 903 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRV--RRAAPWKDLPRRVFDATL 504 VL A++ L Y R+ + + P L Sbjct: 904 EIVLGTVQHLQDAVNWLGYTYLYIRMSVCSGPRYMEFPTMALRLIL 949 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 89/527 (16%), Positives = 178/527 (33%), Gaps = 52/527 (9%) Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 AL + R + +R +Y+ +AL V + + Sbjct: 944 ALRLILXXXFAIMRLFTTQSDARCVYLVSQEALADLVFADWHNKFGSL------------ 991 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHA 183 +++V TG+T + ++ITT + ++ + R+ ++ V I+DE+ Sbjct: 992 DIKVVKLTGETGTDLK---LIAKGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQL 1048 Query: 184 VAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 V G G + + R+ + + + + LSA++ A DVA +LG + T P+ Sbjct: 1049 VGGED-GPVMEIVCSRMRYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPS 1107 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 +R + + + G +A R ++ + IL H+ IVF + Sbjct: 1108 VRPIPLELHI------------QGYNVTHNATRIATMSKPVYNAILK-YSAHKPVIVFVS 1154 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGSV 359 SR A + A+ LQ + + + T ++ + H + Sbjct: 1155 SRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLHEGL 1214 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI----------QVATPLSVASG 409 S + EQ SG ++ V + L G+ + A ++I + Sbjct: 1215 SASDHRLVEQLFDSGAVQVAVVSRDLCWGMSISAHLVIIMDTQFYNGKNHSYEDYPITDV 1274 Query: 410 LQRIGRAGHQV-GGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLAQ 466 LQ IGRA +K + ++ +D + L++ + N V Sbjct: 1275 LQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTKT 1334 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 A+D L Y R+ + + +L D LS + + K + Sbjct: 1335 IENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCISV 1394 Query: 527 RETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 + + + TI ++S+ L + G + Sbjct: 1395 EDDMDTLPLNLGMIAAYYYINYTTI---ELFSLSLNSKTKVRGLLEI 1438 >UniRef50_Q6C0Y6 YALI0F20724p n=1 Tax=Yarrowia lipolytica RepID=Q6C0Y6_YARLI Length = 2106 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 122/614 (19%), Positives = 210/614 (34%), Gaps = 75/614 (12%) Query: 5 PDPSSLLPDVFSPATR-----DWFLRAF---KQPTAVQPQTWHVAARSE-HALVIAPTGS 55 P P +PD W F K +Q + + A S+ + L+ APTG+ Sbjct: 420 PAPERAIPDANEKVVSIADMPSWTHVGFSDTKSLNRIQSKVFPCAFESDDNMLICAPTGA 479 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKT AFL L L + + +++YI+P+KAL + R L + Sbjct: 480 GKTNVAFLAMLRCLSHFRAPNG--GFRTNDFKMVYIAPLKALVQEQVREFSKRLNSM--- 534 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVE 174 L+V TGD +K +L+TTPE ++ A V Sbjct: 535 ---------GLKVSELTGDHNL---TKQQIAETQLLVTTPEKWDVITRKAADSSYTNLVR 582 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDR 231 ++IDE+H + +RG L + R + +GLSAT+ + DVA+FL Sbjct: 583 LIVIDEIHLLHD-ERGPVLESIVARTTRRSEQTGDPVRIVGLSATLPNFKDVASFLRVG- 640 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 + + P + G E R ++ +++ + Sbjct: 641 ETGLFYFDSTFRP-----------CPLGQRFLGITEKKAFKRYTAMNDACFDKVIENIKA 689 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRV----QSS 347 IVF +SR K L + A D + A + + Sbjct: 690 GHQVIVFVHSRKETAKTARMLRDRAMDEGLLPLFCASDGSRRTLAERAQDPELDATQKEI 749 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA------ 401 +HH +++ R E+ G +R +V+T++L G+++ A ++I+ Sbjct: 750 IGTGLATHHAGLAQVDRKAAEELFAEGHVRVLVSTATLAWGVNLPAHTVIIKGTQIYNPA 809 Query: 402 ----TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRL 451 T LS LQ +GRAG + +G+ L++ + +E RL Sbjct: 810 KGQWTELSPQDVLQMLGRAGRPRYDDSGEGIIITTHGELNYYLSLMNQQLPIESQLMSRL 869 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 E N V + + L Y R+ + + DA L Sbjct: 870 E---DSLNAEVVGGTVSSVGDGIQWLGYTYLYVRMLVSPGIYLVGSNPDDAALTNRRADL 926 Query: 512 PSGDFSAF--RPKLVWNRETGILTARPGAQL---LAVTSGGTIPDRGMYSVLLPEGEEKA 566 S ++++ +TG + A ++ +T Y + L Sbjct: 927 VHSALSNLAKSGLVIYDTKTGRVRANDLGRVAAHYYITHSSM----RTYRISLKPHFSIV 982 Query: 567 GSRRVGELDEEMVY 580 +V EE Y Sbjct: 983 ELFQVFSASEEFKY 996 Score = 170 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 103/624 (16%), Positives = 189/624 (30%), Gaps = 103/624 (16%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F +Q Q + + V AP GSGKT+ A L L + Sbjct: 1294 FSFFNKIQSQLFRPLVEGDGSVFVGAPPGSGKTVLAELALLRLWNEDA-----------D 1342 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 ++ +Y++P +A + + I +G+ A R Sbjct: 1343 AKTVYLAPTQAQVDARYDDWSQRMNEIHG----------GKTFSKLSGELAADLRK---L 1389 Query: 146 NPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 D+++ TP L+ R R +R V I D+VH V G + R+ + Sbjct: 1390 ATSDVVLATPNQWDS-LSRRWQKRAAVRAVSLFIADDVHLVGGDG---TYETVVSRMRYI 1445 Query: 204 --------LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANM 255 + +GL V D+A +L Sbjct: 1446 DVQLQESGAGRPLRIVGLGVPVADGVDMAGWLDATPYN----------------FKPWTA 1489 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL-RHRSTIVFTNSRGLAEKLTARLNE 314 + H + IL+ +H T++F +SR +T L+ Sbjct: 1490 SPTNIHIQSLSIPHHPSLMQAFLRPTYNAILELAPPKHSQTVIFVDSRRTLVDVTIGLST 1549 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 + ++ P + + T N ++ + + S+S R I Sbjct: 1550 IADEQVLVPPVPEDSNLEL-AMAQVTDNTLKEAIQSGIGHLYPSMSSRDRKIVLALYAEQ 1608 Query: 375 ELRCVVAT---------SSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIGR 415 + ++AT S L VI +++ LQ IG+ Sbjct: 1609 SISTIIATREECWTSPRSQLS----------VILGTQTYEGSEHRYVNYPISTVLQMIGQ 1658 Query: 416 AGHQVGGVSKGLFFPRTRRDL----VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 A + P +D ++ ++ VE L + V+ Sbjct: 1659 A-----SNDALVLTPAAAKDYYLRFLNDSLPVESNLGASLHDALLAEICEKVIESM---D 1710 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 + L Y R+ + +P R DA LS + K+V + G Sbjct: 1711 DTVAWLTYTYLYRRLHANPGFYGVPDRSDDALNVYLSELAETTVEQLVEAKMVEMDDEGG 1770 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLG 591 L A + + + + S L P+ + ++ + V E R ++ I L Sbjct: 1771 LEPLNAASIASYYNVSFDTMATLTSALSPKSKYRSILQAVTTAAEFDSLPIRNHEDILLR 1830 Query: 592 ---AT-SWRIQQITRDQVIVTPAP 611 W++ ++ V++TPA Sbjct: 1831 RLYGHIPWKLPELDS-AVLLTPAF 1853 >UniRef50_C5PFY0 DEAD/DEAH box helicase family protein n=3 Tax=Onygenales RepID=C5PFY0_COCP7 Length = 1441 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 113/597 (18%), Positives = 214/597 (35%), Gaps = 63/597 (10%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYA 65 P+ LPD F A+Q + + + ++ + APTGSGKT+ L Sbjct: 169 PTHELPDRLRSIF------PFSVFNAIQSKCFRPIYLKDDNFAISAPTGSGKTVVMELAI 222 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + + K +++Y +P K+L ++ R+ + Sbjct: 223 CRLISK---------IKDNRFKVVYQAPTKSLCSERFRDWCAKFAA------------FD 261 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG---VETVIIDEVH 182 L+ TGDT + + I+ITTPE M T + ++ +R ++ +IDEVH Sbjct: 262 LQCAELTGDTEQSQLRNV--QNASIIITTPEKWDSM-TRKWKDHMRLMQLIKLFLIDEVH 318 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + + RGA L + + R+ + ++S + I LSATV ++ D+A +LG R T + PA Sbjct: 319 ILKET-RGATLEVVVSRMKS-ANSSVRFIALSATVPNSEDIATWLG--RDPTNQHLPAHH 374 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 PV V S + S P ++ + R + ++F +R Sbjct: 375 ERFGEEFRPVKLQKFVYGYQSNGNDFVFEKVCDSKLPE----VISKHSRRKPIMIFCCTR 430 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 A + L +L+ A + + ++++ HH + Sbjct: 431 HSAISTSKNLAKLWTATNAPGRLWN----SPKKPIIVQNQDLKATVSTGVAFHHAGLDTS 486 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIG 414 R E A G + + TS+L +GI++ ++I+ + +Q +G Sbjct: 487 DRHAVEMAYLQGHISVICCTSTLAVGINLPCHLVIIKNTVSWQDHHRREYTDLETMQMLG 546 Query: 415 RAGH-QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAA 471 RAG Q + + + R D V L NL N L T Sbjct: 547 RAGRPQFDNSATAVILTKKERVDHYQKLVTGSEPLESCLHFNLIDHLNAEVGLGTVTDIE 606 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 +A L +++R+++ + +L A + + + D + + + Sbjct: 607 SATMWLAGTFFFTRLQKNPTYYNLKEGCDRADEEEMMRQICEKDIKLLQECSLITERVPL 666 Query: 532 LTARPG--AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVND 586 + G V + L P+ + + + DE + + Sbjct: 667 KSTEFGDVMARYYVKFETM----KAFIALPPKAKMSEILSAIAQADEFREIRLKAGE 719 >UniRef50_Q8N3C0 Activating signal cointegrator 1 complex subunit 3 n=53 Tax=Eukaryota RepID=HELC1_HUMAN Length = 2202 Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 107/581 (18%), Positives = 207/581 (35%), Gaps = 66/581 (11%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTL 59 M + + + + F + K+ +Q + A + E+ L+ APTG+GKT Sbjct: 449 MPLSFEEKPVYIQDLDEIGQLAF-KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTN 507 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 A L L + + + K+ +I+Y++P+KAL ++ L+ Sbjct: 508 IAMLTVLHEIRQHFQQG---VIKKNEFKIVYVAPMKALAAEMTDYFSRRLE--------- 555 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET-LRG-VETVI 177 + + V TGD +S++ R +L+TTPE ++ + L V +I Sbjct: 556 ---PLGIIVKELTGDMQLS-KSEILR--TQMLVTTPEKWDVVTRKSVGDVALSQIVRLLI 609 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVT 234 +DEVH + RG L + R + ++ + +GLSAT+ + DVA FL + + Sbjct: 610 LDEVHLLHED-RGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIG 668 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 + P + G + + ++ +L +V Sbjct: 669 LFFFDGRFRPV-----------PLGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAGHQ 717 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVD----AAHFESTSGATSNRVQSSDVF 350 +VF ++R + L E + + + +V+ Sbjct: 718 VMVFVHARNATVRTAMSLIERAKNCGHIPFFFPTQGHDYVLAEKQVQRSRNKQVRELFPD 777 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------- 401 HH + ++ R + E +G ++ +V T++L G+++ A ++I+ Sbjct: 778 GFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGS 837 Query: 402 -TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENL 454 L + +Q GRAG Q +G+ + L+ +E F LE+L Sbjct: 838 FVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQRNPIESQF---LESL 894 Query: 455 TPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--DATLDMLSGR-- 510 N L T A+ + Y R+R + + + D TL + Sbjct: 895 ADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLV 954 Query: 511 YPSGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI 549 G + + TG ++ + TI Sbjct: 955 IEVGRKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKYNTI 995 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 107/572 (18%), Positives = 210/572 (36%), Gaps = 71/572 (12%) Query: 1 MADNPDPSSLLPDV-FSPATR---DWFLR--AFKQPTAVQPQTWHVAARSE-HALVIAPT 53 + + P + L D+ P T + F VQ Q +H ++ + L+ APT Sbjct: 1292 LPERHPPHTELLDLQPLPITALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPT 1351 Query: 54 GSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIA 113 GSGKT+AA L +K TS+ +YI+P+KAL + + ++ ++ Sbjct: 1352 GSGKTVAAELAIFRVF-----------NKYPTSKAVYIAPLKALVRERMDDWKVRIEE-- 1398 Query: 114 DERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRG 172 ++ +V TGD +S D+++TTPE + S + R ++ Sbjct: 1399 ---------KLGKKVIELTGDVTPDMKS---IAKADLIVTTPEKWDGVSRSWQNRNYVQQ 1446 Query: 173 VETVIIDEVHAVAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGG 229 V +IIDE+H + G +RG L + + R + + + +GLS + +A D+A +L Sbjct: 1447 VTILIIDEIHLL-GEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNI 1505 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 + P++R + + + G + R S+ I Sbjct: 1506 KQMGLFNFRPSVRPVPLEVHI------------QGFPGQHYCPRMASMNKPAFQAI-RSH 1552 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQSSD 348 + ++F +SR L A + +D E + + ++ + Sbjct: 1553 SPAKPVLIFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMENIIATVRDSNLKLTL 1612 Query: 349 VFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV-------- 400 F HH + + R E+ + +++ ++ATS+L G++ A ++I+ Sbjct: 1613 AFGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKT 1672 Query: 401 --ATPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN---- 453 + LQ +GRAG Q K + + + E +E+ Sbjct: 1673 RRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPF---PVESSLLG 1729 Query: 454 -LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 L+ N T A+D + ++ R+ + +L D+ LS Sbjct: 1730 VLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLGDVSHDSVNKFLSHLIE 1789 Query: 513 -SGDFSAFRPKLVWNRETGILTARPGAQLLAV 543 S + + + ++ + Sbjct: 1790 KSLIELELSYCIEIGEDNRSIEPLTYGRIASY 1821 >UniRef50_Q6FKF7 Strain CBS138 chromosome L complete sequence n=1 Tax=Candida glabrata RepID=Q6FKF7_CANGA Length = 2140 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 115/613 (18%), Positives = 223/613 (36%), Gaps = 71/613 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQ-----PTAVQPQTWHVAA-RSEHALVIAPTGS 55 P S L ++ W +AF +Q + +H A ++ L+ APTG+ Sbjct: 457 PQKPVYESELINISD--LPKWAQKAFPSKEVTTLNYIQSKVYHKAFHDDKNLLMCAPTGA 514 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKT A L L L + EDT RI+Y++P+KAL + R + L Sbjct: 515 GKTNVAVLTILQVLSQYINEDTDSLKLND-FRIVYVAPLKALVQEQVREFERRL------ 567 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVE 174 + ++V TGDT ++ +L+TTPE ++ + + ++ Sbjct: 568 ------SNFGIKVSELTGDTTL---TRSEIEKFQVLVTTPEKWDVLTRKNDENDIMLKLK 618 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDALLH--TSAQRIGLSATVRSASDVAAFLGGDRP 232 +IIDE+H + +RG L + R ++ + I LSAT+ + VA FL Sbjct: 619 LLIIDEIHLLND-QRGPVLESLIMRAKENCRLRSNPRIIALSATLPNYEQVAKFLQVPEE 677 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + R +S V G + + + + D V Sbjct: 678 SIYYFDNSYRP------------CPLSQVFCGVKSTNSVKKLSFVNEVCFEKVCDAVKDG 725 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR--VQSSDVF 350 I+F +SR + + + +++ + ++ + G S +++ Sbjct: 726 HQVIIFVHSRKETTRTAKFIADKFSSLEKNILFFEENSRSILKSEGENSKDIDLKTLLPQ 785 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP---- 403 HH ++++ R+++E G LR +V+T++L G+++ A ++I+ + +P Sbjct: 786 GIGIHHAGLARDDRSLSEDLFADGVLRVLVSTATLAWGVNLPAHTVIIKGTDIYSPEVGN 845 Query: 404 ---LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENL 454 LS LQ +GRAG + +G+ +++ + +E F L Sbjct: 846 WIRLSPQDLLQMLGRAGRPRYDTSGEGIIITNQTDIQYYLGILNQQLPIESQF---LSKF 902 Query: 455 TPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK---DLPRRVFDATLD-MLSGR 510 N L A ++ +Y R+ + D + +SG Sbjct: 903 VDNLNAEISLGMVKTKLDAKRWIKDSYYYVRLCYDPSTYLPENFKEIDNDKRISCFISGL 962 Query: 511 YPSG-DFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAG 567 + + ++ ++ G ++ S Y L + K+ Sbjct: 963 IDAAIELLLSMSLIMIDKRNGTYIPTKLGRIASHYYISC---NSVAKYFQRLKKTCSKSE 1019 Query: 568 SRRVGELDEEMVY 580 ++ EE Y Sbjct: 1020 LFQIFSESEEFKY 1032 Score = 110 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 68/527 (12%), Positives = 156/527 (29%), Gaps = 81/527 (15%) Query: 26 AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 F +Q ++ E LV +P +GKT A L L + Sbjct: 1333 GFNSLNKIQSDVFNEVYHGTESLLVCSPPCTGKTTLALLATLSHII------------NT 1380 Query: 85 TSRILYISPIKALGTDV-----QRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 RI+Y+ G + I K I D ++VG G+ Sbjct: 1381 KGRIIYVV-----GNEKKLQSCYEKWMIFFKSINDS----------IKVGKLGGNLQDN- 1424 Query: 140 RSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLE 198 +T + I +T+P+ + ++ R + L V+ ++ D++H + GA+ +++ Sbjct: 1425 --LITFSHSHITLTSPQQVEVLTHRWRKLKLLLDVDLLVFDDIHEIGQGLTGANYEIAVS 1482 Query: 199 R---LDALLHTSAQRIGLSATVRSASDVAAFLGGDRP-VTVVNPPAMRHPQIRIVVPVAN 254 R + + + I S + + SD+A ++G + + ++ + + Sbjct: 1483 RFNFIKTQADFNPRIIAFSNCLLNPSDIAGWIGVKKENTHNFATDEDQSYRV---INIKA 1539 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 +++ + +A + V + A + + Sbjct: 1540 FENIFANDYTRSMLLYATSFVLSSQSTLVKNVLLVTTGK---------VGALRAANEILA 1590 Query: 315 LYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSG 374 L + + + + S Q + H + + +G Sbjct: 1591 LLKSNSKLHKISEITDFGIDQQDMEKS--AQKYLSYGIGLCHEGMKHATISNIVNLFNAG 1648 Query: 375 ELRCVVATS-SLELGI-DMGAVDLVIQVATP----------LSVASGLQRIGRAGHQVGG 422 + ++++ ++ I ++ +V+ + S+ + A Sbjct: 1649 VISVLISSRFTM---IQNIKPSQIVVLGTSWHNCGESSPVHYSINEIMNL---ANLSYHH 1702 Query: 423 VSKGLFFP-RTRRDLVDSAV----IVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 S R L + + VE E L V+ +D L Sbjct: 1703 SSDVTILTDSNRLPLYNRFLNDGIPVESFL---YEKLIDLLLTEVVIGTVKSRQDCLDIL 1759 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV 524 +Y R+ + L + L+ + +L+ Sbjct: 1760 TFTYFYRRIHNNPSYYGLKDASSLSISGFLTEIVETAINDLSTSQLI 1806 >UniRef50_B6A9C7 Sec63 domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6A9C7_9CRYT Length = 2300 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 119/585 (20%), Positives = 203/585 (34%), Gaps = 75/585 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYA 65 LP P + ++ +Q + +VA ++ LV APTGSGKT A L Sbjct: 459 IDELPKWCHPCFKSV---GIERLNLIQSKVCNVALNESDKNILVCAPTGSGKTNIALLCI 515 Query: 66 LDRLF------REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 L+ L E + +I+YISP+KAL T+ +L+I L+ Sbjct: 516 LNTLSLFMRKTSEFSVNEEFNFDTSKFKIVYISPMKALVTEQVESLRIRLR--------- 566 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIID 179 + + V TGDT + I ITTPE L ++ + ++ +IID Sbjct: 567 ---PLGIVVNEMTGDTRVS---RSLMESTQIFITTPEKLDVITRKMSDGLSDVLKLIIID 620 Query: 180 EVHAVAGSKRGAHLALSLERLD-------ALLHTSAQRIGLSATVRSASDVAAFLGGDRP 232 E+H + + RGA L + R +LL + +GLSAT+ + DVA FL D Sbjct: 621 EIHMLHDA-RGAVLEGLVARFKDNESQVNSLLKNKIRLVGLSATLPNYLDVARFLEVDPR 679 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 V + P + G E R + + I+ V H Sbjct: 680 VGLFYFGPEYRPV-----------PLKQTYIGIREKKGFRRLQMLNSILYEKIMKSVKEH 728 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA-----VDAAHFESTSGATSNRVQSS 347 +VF +SR + + + + + + SG S+ ++ Sbjct: 729 -QILVFVHSRKDTIQTAKFIRDKATSDGLLNSFFPGNSNVSREILLDELSGIKSDNLKDV 787 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA------ 401 HH + + R I E G ++ +V T++L G+++ A ++I+ Sbjct: 788 LPCGIAIHHAGLLRTDRKIVEDLFADGHIQILVTTATLAWGVNLPAHTVIIKGTQVYKPE 847 Query: 402 ----TPLSVASGLQRIGRAGH-QVGGVSKGLFFP-----RTRRDLVDSAVIVECMFAGRL 451 + LS Q IGR G Q G+ L + +E +L Sbjct: 848 TGQWSELSPLDIFQMIGRGGRPQYDIDGHGIIITDYQNLTYYSSLFNQQFYIESQLISKL 907 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRR---VFDATLDMLS 508 +L N VL + ++ Y R+++ L + + + Sbjct: 908 PDLI---NAEIVLGNIQGKLDVLKWIKKTFLYIRLKKNPKLYGLNVDSSITINTCIRDTT 964 Query: 509 GRYPSGDFSAFRP-KLVWNRETGILTARPGAQLLA-VTSGGTIPD 551 + E+ +LT + + IP Sbjct: 965 EDITTELNDELIENYCTRMAESALLTLDKLGAIQYDYRTDIVIPS 1009 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 82/600 (13%), Positives = 184/600 (30%), Gaps = 111/600 (18%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGK---TLAAFLYALDRLFREGGEDTREAHK 82 AVQ Q +++ S + + A SG+ T A + RL + Sbjct: 1397 ITTFNAVQTQLFNILYNSNTNLFIAASPRSGQFICTCIA----ISRLLEN-------LEE 1445 Query: 83 RKTSRILYIS------PIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTP 136 K +ILY+ P +A L+ I E GD Sbjct: 1446 PKFFKILYLCGNPEMLPYRA------NKLKAVFGDIVGEFAGNVN-----------GDVE 1488 Query: 137 AQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHLA 194 ++ ++I+T + + +AR LR ++ +IID + ++ K G + Sbjct: 1489 KTDK-------YPLIISTFDYWDKVSRKLVKARALLRNLKLLIIDHIELLSTIKYGPIIE 1541 Query: 195 LSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 ++ R+ L+ + IG S ++ +A DVA +LG + P++R IR+ + Sbjct: 1542 STISRIRYLISPLDIELRIIGYSMSISNAKDVAEWLGVSKDGIFSFHPSIRPNPIRLSIK 1601 Query: 252 VANM-----------DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST-IVFT 299 + + + S Y ++ + + + ST +++ Sbjct: 1602 GFDSYYRSGRILSMIRQLPKYLQKYVMKTQTKISQSKTEYKDSQLDNNDIESASTLLIYV 1661 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE--------STSGATSNRVQSSDVFI 351 + + L+ + + ++ + Sbjct: 1662 PDQETCTMVAKDLSFRMSELNNNNYCTLRSQTSINFEEFIKIYGNEMKLGKLLEICMMLG 1721 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS----VA 407 H + SK + I +A K G + ++AT + +++ ++I V+ Sbjct: 1722 IGFLHEAQSKYEFTIVLEAYKKGVITVLIATEDFKWKLNVQFTTVIIMDTQRFDDDILVS 1781 Query: 408 SGLQRIGRAGHQ--------------------VGGVSKGLFFPRTRRDLVDSAVIVECM- 446 L + +G + + + + L ++ + Sbjct: 1782 RNL-------RRIINYSAIDMSCIVARCIRPKLGDIGNIILLCPSSKKLYYEYILNNAIP 1834 Query: 447 FAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 LE + N L ++D + +Y R+ + + L + Sbjct: 1835 LESYLEYGIIDSINTEIALKVIKSRQDSIDWITWTFFYRRLSKNPTYYGLLDCSPRYISE 1894 Query: 506 MLSGRYPSGDFSAFRPKLV--------WNRETGILTARPGAQLLAVTSGGTIPDRGMYSV 557 LS + + + + ++ ++ + L+ + IP V Sbjct: 1895 YLSEVLENVLVTLASAQCITLSGEESEYDDDSVKKDKSTTSDLIIPLNLSLIPAYYSLKV 1954 >UniRef50_B6JWX3 Antiviral helicase SLH1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JWX3_SCHJY Length = 1949 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 123/596 (20%), Positives = 217/596 (36%), Gaps = 77/596 (12%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLA 60 A P + + R FL + +Q + +A + E+ LV APTG+GKT Sbjct: 247 ARLPGEKPVKISSLNTLCRKTFL-GYTSLNRIQSLIFPIAFTTNENMLVCAPTGAGKTDV 305 Query: 61 AFLYALDRLFR-------EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIA 113 A L L L + D ++ +I+Y++P+KAL +V + L + Sbjct: 306 AMLTILQTLSNYCDVVGVDSNGDDIYNLRKDEFKIVYVAPMKALAAEVVDKMGKRLAWL- 364 Query: 114 DERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLR 171 ++ TGD ++ + +L+TTPE ++ E Sbjct: 365 -----------GVKTREFTGDMQLTKKE---LSETQLLVTTPEKWDVVTRKSVGDTELAE 410 Query: 172 GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLG 228 V +IIDEVH + RGA + + R + TS + +GLSAT+ + DV+ FLG Sbjct: 411 KVRLLIIDEVHMLHDD-RGAVIESIVARTQRFVETSQTMIRIVGLSATLPNYLDVSDFLG 469 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDE 288 +R + P P+ G + G++ +L+ Sbjct: 470 VNRQRGLFYFSNAFRP-----CPIEQ-----HFIGVKGTANSRQSMGNLDEAAFDKVLNL 519 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE---------STSGA 339 + +VF +SR K +L E + + + D E + Sbjct: 520 LENGHQVMVFVHSRKDTIKTAKKLKEQFYNEGKMDLLDSSDELQSENPKYKLMQREVGKS 579 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 N ++ + H+ + + R +TE+ G ++ + T++L G+++ A +VI+ Sbjct: 580 KMNDLKELFKYGLGVHNAGMHRSDRHLTEKLFSMGLIKVLCCTATLAWGVNLPAYAVVIK 639 Query: 400 VA----------TPLSVASGLQRIGRAGHQVGGVS-KGLFFPRTRR-----DLVDSAVIV 443 L V LQ GRAG S + + +V + Sbjct: 640 GTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAEAYIVTTHDKLAHYLSVVTQQSPI 699 Query: 444 ECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 E F +E+L N L T A+ L Y R+R+ + Sbjct: 700 ESQF---VEHLVDNLNAEIALGSVTNIDEAVSWLGYTYLYIRMRKNPLIYGIAYDTLQDD 756 Query: 504 LDMLSGRYPSGDFSAFR----PKLVWNRETGILTARPGAQL-----LAVTSGGTIP 550 + S R +A + +V+N+ TG LT + ++ ++ S TI Sbjct: 757 PLLGSKRRELVMLAAQKLYANQMIVYNKNTGYLTPKDLGRIASHYYISYQSVTTIN 812 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 115/571 (20%), Positives = 211/571 (36%), Gaps = 70/571 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P + L + P + + F AVQ Q +H + + + APTGSGKT+AA L Sbjct: 1118 PLPITALQN---PVLEEICAKRFSFFNAVQSQFFHTVYHTPTNVFIGAPTGSGKTMAAEL 1174 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + S+++YI+P+KAL + ++ L Sbjct: 1175 A-----------TWWAFREHPGSKVVYIAPMKALVKERLKDWGARLVE-----------P 1212 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVH 182 +++ + TGDT ++ + DI+ITTPE + R R+ ++ V VIIDE+H Sbjct: 1213 MHINMIELTGDTSPDSKTIMG---ADIIITTPEKWDGITRNWRTRKYVQNVSLVIIDEIH 1269 Query: 183 AVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + GS RG L + + R++ + ++S + +GLS V +A D+A +LG + Sbjct: 1270 LL-GSDRGPILEMIVSRMNYIASQTNSSVRILGLSTAVANAHDLADWLGITDGLFNFR-- 1326 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 V PV G ++ R S+ I + I+F Sbjct: 1327 -------HSVRPVPL----EIYIDGFPGRAYGPRMMSMNKPAFQAI-KTHSPTKPVIIFV 1374 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQSSDVFIARSHHGS 358 +SR L A + + E + ++ S F HH Sbjct: 1375 SSRRQTRYTARDLISFCALEDNPRRFLNMKEEDLEMVLTKVEDKNLKMSLPFGIGLHHAG 1434 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVAS 408 ++++ R I+E+ + +++ ++ATS++ G++ A ++++ + Sbjct: 1435 LTEDDRRISEELFVNNKIQILIATSTIAWGVNTPAHLVIVKGTEYYDAKIEGYKDMDQTD 1494 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ +GRAG Q F + + + S VE LE N Sbjct: 1495 VLQMLGRAGRPQFDTEGVARIFVQDTKKSFYKHFLHSGFPVESYLHKVLE---DHINAEI 1551 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 AMD L +Y RV + + ++ + LS + Sbjct: 1552 ASGTLHSRQDAMDFLTWTYFYRRVYQNPVYYGAASNDQESVDEFLSQLINNTFKELELSA 1611 Query: 523 LVWNRETGILTARPGAQL--LAVTSGGTIPD 551 ++ + ++ S ++ + Sbjct: 1612 CIYRTDNENYAPTSLGRIVSYYYISHRSVRN 1642 >UniRef50_A5E7Q8 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E7Q8_LODEL Length = 2016 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 123/603 (20%), Positives = 220/603 (36%), Gaps = 70/603 (11%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLY 64 P+S LP + +Q + + A E+ L+ APTG+GKT A L Sbjct: 352 LPTSSLPAWAREV---FPTNETTTFNRIQSKIYPKAFGSDENLLICAPTGAGKTNVAMLT 408 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L + D + +I+YI+P+KAL + R Q L + Sbjct: 409 MLRAISNHRFNDA---INKDQFKIVYIAPLKALVLEQVREFQRRLTPV-----------F 454 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAV 184 L V TGD + ++LITTPE ++ E L ++ VIIDE+H + Sbjct: 455 GLVVNELTGDASLSQ---QQIKETNVLITTPEKWDIITRENH-EYLSLIKLVIIDEIHLL 510 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 +RG L + R++ + +GLSAT+ + +DVA F+G + + R Sbjct: 511 HD-QRGPVLESIIARINRDQENEVRIVGLSATLPNYNDVAKFIGANEEGIFYFDLSYRPC 569 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + V + + +I + + ++ IVF + R Sbjct: 570 PLEQKFVV------------IKDQKALKKRLAIDEACYDLVHKTLKQNHQLIVFVHLRNE 617 Query: 305 AEKLTARLNELYAARLQRSPSIAVD---AAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 L + +A D + ++ T+ ++Q +HH +SK Sbjct: 618 TVSTAEYLINRLLDQELDLNLVAEDSTREILSQESAQVTNAKLQRILGSGIGAHHAGLSK 677 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------LSVASGLQ 411 E+R + E G L+ +V+T++L G+++ A ++I+ V +P LS Q Sbjct: 678 EERTLVEDLFAQGHLKVLVSTATLAWGVNLPAHTVIIKGTEVYSPESGSWMQLSPQDVFQ 737 Query: 412 RIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLA 465 +GRAG + +G+ +++ +E L L N V Sbjct: 738 MLGRAGRPRYDKNGEGVIITTQDEIQYYLAILNQQYPIESQM---LNKLIDSMNAEVVRG 794 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF--------DATLDMLSGRYPSGDFS 517 +A+D L Y R+ + L D +L + + Sbjct: 795 SIKTLESAVDWLGHTYLYVRMLQLPSLYMLGGNGNGIGKGKRDDPSLYVKRAEMAHVALT 854 Query: 518 AFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELD 575 + + + G++ A ++ S TI Y+ LL +++ RV Sbjct: 855 VLQRCRLIEYDNGLVKATELGKIASYHYISYQTIN---RYNSLLKPWHKESDIIRVFAQS 911 Query: 576 EEM 578 +E Sbjct: 912 DEF 914 Score = 88.1 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 62/454 (13%), Positives = 138/454 (30%), Gaps = 97/454 (21%) Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETV 176 +R + TGD N I++ PE Y ++ + +++R + + Sbjct: 1272 QRFAKSNEANIFKLTGDLKIDV---QGYNKSQIIVGKPEYFYSLVRRWKTLKSVRSIGLL 1328 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDAL-----LHTSAQRIGLSATVRSASDVAAFLGGDR 231 I+D++H + + L R+ L TS + + +S + DV +L + Sbjct: 1329 ILDDLHLMEAN---PVYEFLLTRVRLLRSQYSHETSLRLVAISYPLMDVRDVCTWLDIKK 1385 Query: 232 PVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 V P ++R D+ + ++S+ + + Sbjct: 1386 ANIVNFPASVREH------------DILQIDLTIDDNSNVNGSDDGEHEYLNDVPSYIEM 1433 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVF- 350 + +++ NS +A K+ + + + + S ++++ Sbjct: 1434 GKKVLIYANSNEMALKIAKQ----------SAFNFKAGIDAQKFVDKVKSVQLKAFLKDA 1483 Query: 351 IARSHHGSV---SKEQRAITEQALKSGELRCVVAT------SSLELGIDMGAVDLVI--- 398 + + S + I + +G + ++AT S L D+V+ Sbjct: 1484 GVALY---LNTFSDLDKKIAKHLFANGTVSVLIATRESEDFSILA--------DVVMIDK 1532 Query: 399 --------QVATPLSVASGLQRIGRAGHQVGGVS------KGLFFPRTRRDLVDSAV--- 441 +V + IG S G + +T ++V+ + Sbjct: 1533 TQYLDNYEHREIDYNVTTIFDMIG---------SCLSLQNDGHIYMQTSSEMVNYYLSFI 1583 Query: 442 ----IVECMFAGRLENLTPPHNPLDV---LAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 +VE + V L Q A +D L +Y R+ + + Sbjct: 1584 NTGIMVESQLRSHVHEFFI---AGIVDKLLRQ---RAECLDLLTHSFFYRRLLSNPSYYN 1637 Query: 495 LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 D + LS S + + + Sbjct: 1638 CKDISSDGLSEYLSMIIESVVDDLVQNGFIEEKG 1671 >UniRef50_B6H0I8 Pc12g14010 protein n=42 Tax=Saccharomyceta RepID=B6H0I8_PENCW Length = 2009 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 123/592 (20%), Positives = 215/592 (36%), Gaps = 69/592 (11%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR-------EGGE 75 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + + E E Sbjct: 277 FKGYKTLNRMQSLLYDVAYKTNENMLICAPTGAGKTDAAMLTVLNAVGKNTSPNPLENPE 336 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 T + +I+Y++P+KAL +V L L + ++V TGD Sbjct: 337 ATEFTVQVDDFKIVYVAPMKALAAEVTEKLGKRLAWL------------GIKVRELTGDM 384 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHL 193 +R + I++TTPE ++ E ++ V +IIDEVH + +RGA + Sbjct: 385 QLTKREIV---ETQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVI 440 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + IGLSAT+ + +DVA FL ++ + Sbjct: 441 ESLVARTQRQVESTQSLIRIIGLSATLPNYTDVADFLKVNKMAGMFFFDQSFR------- 493 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV V G +I + D + R +VF +SR Sbjct: 494 PVPLEQHFIGVKGKPGSKQS---RDNIDSVAYEKVRDMMERGHQVMVFVHSRKDTVMTAR 550 Query: 311 RLNELYAARLQRSPSIAVDAA----HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L +L A + D A + ++ +HH +++ R + Sbjct: 551 MLMQLAAEEGREDLFSCHDHENYSNALRDMKHARARELRDLFASGFGTHHAGMTRSDRNL 610 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT----------PLSVASGLQRIGRA 416 E+ G ++ + T++L G+++ A +VI+ LS+ +Q GRA Sbjct: 611 MERMFSEGLIKVLCCTATLAWGVNLPAAAVVIKGTQLYNPQEGKFIDLSILDVMQIFGRA 670 Query: 417 GHQVGGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + F T L V + +E F+ RL N L T Sbjct: 671 GRPQFQDTGIGFICTTHDKLNHYLSAVTAQQPIESRFSSRL---VDNLNAEISLGTVTSV 727 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY----PSGDFSAFRPKLVWN 526 A+ L Y R++R + ++ R + +++N Sbjct: 728 PEAVQWLGYSYLYVRMKREPRNYGIEFAELRDDPMLVQRRRQLILQAARVLQKSQMIIFN 787 Query: 527 RETGILTARPGAQL---LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELD 575 +T L A+ ++ V M E + GE D Sbjct: 788 DKTEDLKAKDVGRIASQYYVLQTSVEIFNDMMRPRSGEADVLKMISMSGEFD 839 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 112/576 (19%), Positives = 210/576 (36%), Gaps = 72/576 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P S L + P + + + F+ +Q Q +H+ + + L+ +PTGSGKT+AA L Sbjct: 1122 PLPISALKN---PILEEIYGQRFQFFNPMQTQIFHLLYHTPANVLLGSPTGSGKTVAAEL 1178 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 ++ S+++YI+P+KAL + ++ + L + Sbjct: 1179 AM-----------WWAFREKPGSKVVYIAPMKALVRERVQDWRKRLT-----------RQ 1216 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + L++ TGD R+ DI+ITTPE + S + R+ +R V VIIDE+H Sbjct: 1217 MGLKLVELTGDNTPDTRT---IRDADIIITTPEKWDGISRSWQTRDYVRKVSLVIIDEIH 1273 Query: 183 AVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G RG L + + R++ + S + +G+S +ASD+A +LG + Sbjct: 1274 LLGGD-RGPILEIIVSRMNYIASQSKGSVRLMGMSTACANASDLANWLGVKEGLFNFR-- 1330 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 V PV + G S+ + + IVF Sbjct: 1331 -------HSVRPVPLEIFIDGFPEQRG---FCPLMQSMNRPTF-LAIKNHSPEKPVIVFV 1379 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGS 358 SR L + + E + + ++ + F HH Sbjct: 1380 ASRRQTRLTAKDLINYCGMEDNPRRFVRMSEDDLELNLARVKDDALREALNFGIGLHHAG 1439 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVAS 408 + + R + E+ + +++ +VATS+L G+++ A +V++ + + Sbjct: 1440 LVESDRQLAEELFANNKIQVLVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYRDMDLTD 1499 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM-FAGRLENLTP-PHNPLDVLA 465 LQ +GRAG Q F + + + L + Sbjct: 1500 VLQMLGRAGRPQFDTSGIARIFTQDSKKAFYKHFLHTGFPVESTLHKVLDNHLGAEVSAG 1559 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA--------TLDMLSGRY-PSGDF 516 A+D L ++ R+ + + L + D + S + Sbjct: 1560 TIGTQQDALDYLTWTFFFRRLHKNPSYYGLEISAEEQNTMAAQATAQDFMVELVGKSLND 1619 Query: 517 SAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIP 550 A ++ + TG + + P ++ S TI Sbjct: 1620 LAESSCVLVDSATGEVDSTPFGKIMSYYYLSHKTIR 1655 >UniRef50_O60072 Putative helicase mug81 n=1 Tax=Schizosaccharomyces pombe RepID=MUG81_SCHPO Length = 1935 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 117/562 (20%), Positives = 205/562 (36%), Gaps = 69/562 (12%) Query: 27 FKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRL------FREGGEDTRE 79 ++ +Q + +A ++ E+ L+ APTG+GKT A L L + E Sbjct: 275 YQTLNRIQSLVYPIAYKTNENMLICAPTGAGKTDVALLAMLQTISNYVESMNLMDESEPL 334 Query: 80 AHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 R +I+YI+P+KAL +V + L + L+ TGD + Sbjct: 335 DVHRDDFKIVYIAPMKALAAEVVEKMGKRLAWL------------GLKTRELTGDM---Q 379 Query: 140 RSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 +K IL+TTPE ++ + V VIIDEVH + +RGA + + Sbjct: 380 LTKTEIAETQILVTTPEKWDVVTRKSVGDTQLAEKVRLVIIDEVHMLHD-ERGAVIESLV 438 Query: 198 ERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 R L+ TS + +GLSAT+ + DVA FLG +R + + P P+ Sbjct: 439 ARTQRLVETSQQMIRIVGLSATLPNYLDVADFLGVNRYKGLFYFSSAFRP-----CPIEQ 493 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + + + I +L + ++F +SR +L E Sbjct: 494 HFIGAKGSPKIVNSN-------IDEACFDKVLKLIQEGHQVMIFVHSRKETINSAKKLRE 546 Query: 315 LYAARLQ----RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 + + + + S + + ++ + H+ + + R +TE+ Sbjct: 547 QFFHEGEADLLDNSQHEKYSLAQRDVSKSKNKELKELFKYSMGIHNAGMLRSDRHLTERL 606 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGHQV 420 G L+ + T++L G+++ A ++I+ L V LQ GRAG Sbjct: 607 FSMGILKILCCTATLAWGVNLPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQ 666 Query: 421 GGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 S + T L V +E F + L N L T A+ Sbjct: 667 FESSAVAYIITTHDKLSHYISVVTQQSPIESRFT---DRLVDNLNAEVSLGTVTNIDEAV 723 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR----PKLVWNRETG 530 L Y R+RR + + S R +A R +V+N++ G Sbjct: 724 SWLGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNG 783 Query: 531 ILTARPGAQLL--AVTSGGTIP 550 L + ++ + T+ Sbjct: 784 YLIPKDLGRIASNYYINYQTVS 805 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 118/597 (19%), Positives = 213/597 (35%), Gaps = 72/597 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P + L D P + F AVQ Q +H ++ + V APTGSGKT+AA L Sbjct: 1113 PLPITALHD---PVLEGICAKRFSFFNAVQTQFFHTIYHTDTNIFVGAPTGSGKTMAAEL 1169 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L S+++YI+P+KAL + ++ L Sbjct: 1170 ATWRALHNY-----------PKSKVVYIAPMKALVKERVKDWGHRLVE-----------P 1207 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + + + TGDT ++ +I+ITTPE + S ++R+ ++ V +I+DE+H Sbjct: 1208 MGISMIELTGDTNPDVKA---VTNANIIITTPEKWDGITRSWKSRKYVQDVSLIILDEIH 1264 Query: 183 AVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + GS RG L + + R++ + + + +GLS V +A+D+A +L + Sbjct: 1265 LL-GSDRGPVLEMIVSRMNYVASQTNKKVRVLGLSTAVANANDLANWLNIRDGLFNFR-- 1321 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 V PV G ++ R S+ I + ++F Sbjct: 1322 -------HSVRPVPL----EIYIDGFPGRAYCPRMMSMNKPAFQAI-KTHSPTQPVLIFV 1369 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQSSDVFIARSHHGS 358 +SR L + +D E S ++ + F HH Sbjct: 1370 SSRRQTRLTAKDLIAFCGLEDNPRRFLYMDEEELEMIVSEVEDKSLKLALPFGIALHHAG 1429 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVAS 408 +++ R I+E+ + +++ ++ATS+L G++ A ++++ + + Sbjct: 1430 LTENDRKISEELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGGYKDMDLTD 1489 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRD-----LVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ +GRAG Q F + + + S VE L+N N Sbjct: 1490 VLQMLGRAGRPQFDNSGVARIFVQDIKKSFYKHFLHSGFPVESYLHKVLDN---HLNAEI 1546 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 AMD L +Y RV + + + LS + + Sbjct: 1547 ATGTIDCIQGAMDFLTCTYFYRRVHQNPVYYGADGDDQKSIDTYLSKLVVTAFNELEKSA 1606 Query: 523 LVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEE 577 ++ ++ TI R + E + + E E Sbjct: 1607 CIYRVNEETYAPTTLGRIVSYYYLFHTTI--RNFVQKITENAEFDLALQLLAEASEF 1661 >UniRef50_C4QQ45 U520, putative n=5 Tax=Bilateria RepID=C4QQ45_SCHMA Length = 2211 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 112/608 (18%), Positives = 214/608 (35%), Gaps = 89/608 (14%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 PA K +Q + +H A + E+ L+ APTG+GKT A L + L + Sbjct: 480 PAYAQAAFEGCKTLNLIQSRLYHAAMETDENLLLCAPTGAGKTNVALLCIMHELGKFINP 539 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 D + +++YI+P+++L +V N L + ++V TGD Sbjct: 540 DG--TINKDEFKLIYIAPMRSLVQEVVGNFNKLL------------SSYGIKVDELTGD- 584 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHL 193 + S+ +++ TPE ++ R ++ V +I DE+H + RG L Sbjct: 585 --HQLSREQIYETQVIVCTPEKWDVITRRGGDERAYIQLVRLIIFDEIHLLHDD-RGPIL 641 Query: 194 ALSLERLDALLHTSAQRIGL-----------------SATVRSASDVAAFLGGDRPVTVV 236 + R + +++ GL SAT+ + DVA FL D + Sbjct: 642 EAIVARTLRAVESTS---GLAVSNDIGGGGGVRLVGLSATLPNYEDVATFLRVDCSKGLF 698 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 + P + G E R + + +++ R+ + Sbjct: 699 HFDNSYRPV-----------PLEQQYIGITEKKAVKRYQIMNDIVYDKVMEHAGRN-QIL 746 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH----FESTSGATSNRVQSSDVFIA 352 +F +SR K L + + + A + ++ ++ + Sbjct: 747 IFVHSRKETGKTARTLRDACLEKDTLGIFMKEKNASAVVLRQEAEQVKNSELKDLLPYGF 806 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP------ 403 HH +S+ R + E ++ +V+T++L G+++ A ++I Q+ +P Sbjct: 807 GIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVLIKGTQIYSPEKGRWT 866 Query: 404 -LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTP 456 L +Q +GRAG Q +G+ L++ + +E + L Sbjct: 867 ELGALDVMQMLGRAGRPQYDTKGEGILITNHTELQYYLSLMNQQLPIESQL---VSRLAD 923 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP---RRVFDATLDMLSGRYPS 513 N VL T A+ L Y R+ R +P + + Sbjct: 924 LLNAEIVLGTVTTIREAVTWLGYTYLYIRMLRNPTLYGVPQGSEKDDPWLEQYRRDLVHT 983 Query: 514 GDFSAFRPKLV-WNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVG 572 R +L+ ++R +G L + T G I + K +G Sbjct: 984 AAIELERSQLIRYDRRSGCLQS---------TELGRIASHYYLTHTTVLSYNKLLRPGLG 1034 Query: 573 ELDEEMVY 580 E++ V+ Sbjct: 1035 EIELFRVF 1042 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 101/577 (17%), Positives = 201/577 (34%), Gaps = 50/577 (8%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P + L + + K +Q Q ++ S E+ L+ APTGSGKT+ A L Sbjct: 1330 PLPVTALRNK---DFEALYTDRIKVFNPIQTQVFNSLYNSDENVLIAAPTGSGKTVCAEL 1386 Query: 64 YALDRLFREGG--EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGE 121 + + + R +Y+ P + ++ + R Sbjct: 1387 TIFRLITTHNSSTNQSDSSGTTANFRCIYVLPPH----------EEQVEQRYIDWASRFG 1436 Query: 122 TEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDE 180 ++ RV TG+T + +I++TTPE ++ + R+ ++ V I D Sbjct: 1437 EKLGKRVVRLTGETSVDLK---LLARGNIIVTTPEHWDVLSRRWKQRKNVQNVNLFIADN 1493 Query: 181 VHAVAGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVN 237 +H V GS+ G+ L + R+ + + IGLS ++ + D+A++LG T Sbjct: 1494 LHLV-GSEGGSVLEVVCSRMRYISSQVDNPIRIIGLSHSLTNGRDIASWLGCTSGATYNF 1552 Query: 238 PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIV 297 PPA R + + + N+ +S + + + + + + T+V Sbjct: 1553 PPATRPIPLELTIMPFNIPHQASRLLAMTKPVYQLITRLAFTPS-PAGSSQHSQRKPTLV 1611 Query: 298 FTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATS----NRVQSSDVFI-- 351 + +R A++ L ++A S + + E+ S A + Sbjct: 1612 YVPTRRQAQRAALDLITMFAVSNATSKFQTISSHLEEALSRAADQLADRALAEVIRHGGG 1671 Query: 352 ARSHHGSVSKEQRAITEQALKSGELRCVVATSSL---ELGID-MGAVDLV---------- 397 H ++SK R + E +G L +V + +L + + A ++ Sbjct: 1672 VAYLHEAISKPDRRLIEVLFAAGALHTLVVSRALVWAAASPNPLTAYLVIVMDTQDYNGK 1731 Query: 398 IQVATPLSVASGLQRIGRAGHQV-GGVSKGLFFPRT-RRDLVDSAVIVECMFAGRLEN-L 454 I + ++ +G A +K + +T +++ + + L++ L Sbjct: 1732 IHAYEDYPIVDLIEMLGHANRPNIDSEAKAVVLCQTGKKEFLKKFLHDPLPVESHLDHAL 1791 Query: 455 TPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG 514 N V A+D L Y R+ + + +L D LS + Sbjct: 1792 HDHFNAEIVTKTIENKQDAVDYLTWTFLYQRMTQNPNYYNLQGVTHRHLSDHLSELVETT 1851 Query: 515 DFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI 549 K + + L + TI Sbjct: 1852 LNDLETSKCISIEDGIDLAPLNLGMISAYYYIQYNTI 1888 >UniRef50_Q54G57 Activating signal cointegrator 1 complex subunit 3 n=6 Tax=Eukaryota RepID=HELC1_DICDI Length = 2195 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 111/582 (19%), Positives = 217/582 (37%), Gaps = 59/582 (10%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR 71 + + +R F + K+ +Q + + A +S E+ L+ APTG+GKT A L L + Sbjct: 467 ESIAEISRAAF-GSIKKLNRIQSRVFESAYKSNENILISAPTGAGKTNIALLTILHEI-- 523 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 E + + +I+YI+P+KAL +++ LK + + Sbjct: 524 ESNINPYGYLDKDNFKIIYIAPLKALASEMVEKFSNSLKYL------------GIVSKEL 571 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL-RGVETVIIDEVHAVAGSKRG 190 TGD ++ I++TTPE ++ + L + V +IIDE+H + +RG Sbjct: 572 TGDMQLTQKE---LKETQIIVTTPEKWDVITRKSSDVALTKLVRLIIIDEIHLLHE-ERG 627 Query: 191 AHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 L + R + T+ + +GLSAT+ + DVA F+ T + R Sbjct: 628 PVLECIVARTLRQVETTQEMIRIVGLSATLPNYKDVARFIRAPASGTHFFDSSYR----- 682 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 PV + V G + ++ + + ++F +SR K Sbjct: 683 ---PVPLTQNFIGVKDNQG---IMVMKNNMNQLCYERLEKSLKEGHQVMIFVHSRKDTVK 736 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L+++ + R + + S ++S HH + + R + Sbjct: 737 SAEILSDMAKEKHFRFSNEEPSFGAKKEFEKVKSKEIRSLFQHGISVHHAGLLRSDRNVV 796 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAG 417 E+ +G ++ +V T++L G+++ A ++I+ L ++ +Q GRAG Sbjct: 797 EKYFANGTIKVLVCTATLAWGVNLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAG 856 Query: 418 HQVGGVSKGLFFPRTRR------DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 S F ++ L+ S++ +E F LE N VL + Sbjct: 857 RPQFDTSGEGFLLTSKDKLDHYLSLMSSSMPIESKFITNLE---DHLNAEIVLGTVSNVN 913 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A++ L + R+ + +P + + KL + + Sbjct: 914 EAVNWLSYTYLFIRMLQNPLVYGIPSSQRSKDPQL--EEFKREIIIRAAKKL---EQCKM 968 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGE 573 ++ L +T G I E + + ++G+ Sbjct: 969 TRFDEQSENLGMTELGRIASHYYIKHPSIETFNEMLNDQLGQ 1010 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 98/568 (17%), Positives = 195/568 (34%), Gaps = 70/568 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFL 63 P P L + + F +Q Q +H + + L+ +PTGSGKT+ A L Sbjct: 1307 PLPKEALKNKDFESL-----FKFSHFNPIQTQVFHTLYYTNNNVLLGSPTGSGKTICAEL 1361 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 +++YI+P+KAL + + ++ + + Sbjct: 1362 AMFKVF-----------RDEPHMKVVYIAPLKALVRERMNDWKVKFQE-----------K 1399 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEVH 182 + ++ TGD + DI+ TTPE + + R + V +IIDE+H Sbjct: 1400 LGKKLVELTGDYTPN---MIALQNADIVTTTPEKWDGISRNWKNRSYVTSVSLLIIDEIH 1456 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G RG L + + R+ + + + +GLS + +A D++ ++G DR P Sbjct: 1457 LI-GELRGPILEVIVSRMKLISKQTGVNIRVVGLSTAMANAIDLSEWMGIDRVGLFNFRP 1515 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 + R I + + G ++ R ++ I + ++F Sbjct: 1516 SCRPVPIEVHI------------QGFQGKNYCPRMQTMNKPSFAAIA-TYSPKKPVLIFV 1562 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 +SR L I + + ++ + F HH + Sbjct: 1563 SSRRQTRLTALDLISYLVVDNDPLQWIQKGFDIEPTLARVKDQHLRHTLSFGIGMHHAGL 1622 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASG 409 + R I E +++ +++TS+L G+++ A ++I+ + Sbjct: 1623 NDGDRTIVESLFGENKIQILISTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLTDV 1682 Query: 410 LQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-----LTPPHNPLDV 463 LQ IGRAG Q K + + + + +E+ L N V Sbjct: 1683 LQMIGRAGRPQFDKEGKAMVMVHEPKKQFYKKFLYDPF---PVESHLKDFLHDHLNAEIV 1739 Query: 464 LAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKL 523 A++ L ++ R+ + + L +A LS S + Sbjct: 1740 SGTIQSKQGAINYLVNTFFFRRLVVSPSYYGLEDNSVEAVNQYLSDLLDSTLADLEQSSC 1799 Query: 524 VWNRETGILTARPGAQL--LAVTSGGTI 549 + E + ++ + T+ Sbjct: 1800 IEINEYDEIIPMSMGKIASFYYLNYKTV 1827 >UniRef50_UPI00006CB1FA Type III restriction enzyme, res subunit family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB1FA Length = 2279 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 116/610 (19%), Positives = 212/610 (34%), Gaps = 73/610 (11%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR-SEHALVIAPTGSGKTLAAFLYAL 66 + LP+ D K+ +Q + A +E+ LV APTG+GKT A L L Sbjct: 539 VTALPEWAQKPFVD-KEVNIKEFNPIQSAVFDCAFNRTENMLVCAPTGAGKTNIALLAIL 597 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + + + D R +I+Y++P+KAL ++ LK + Sbjct: 598 NVIGKYI--DRRGVVNLNKFKIVYLAPMKALVGEMVLTFTQRLKY------------YGI 643 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVA 185 V TGD + SK + ++I TPE ++ R V +IIDE+H + Sbjct: 644 TVRELTGD---SQLSKEQIDSTQLIIATPEKWDIITRKAGDRTYTELVRLLIIDEIHLLH 700 Query: 186 GSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDR------PVTVV 236 +RG L + R + + + +GLSAT+ + +DV FL + Sbjct: 701 D-QRGPVLEALVARTIRMTEQTQENVRIVGLSATLPNFADVQNFLRVKPLNKKENTGGMF 759 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 P + G E A R + + + + Sbjct: 760 FFDHTYRPV-----------PLQQSFIGISEKKAAKRMLLTNEILYQKVEQRASKDQPLF 808 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAV----DAAHFESTSGATSNRVQSSDVFIA 352 +F +SR K L + + + + + ++ + ++ V Sbjct: 809 IFVHSRRDTVKTANFLRQQAYQMNELNKFVEEGSNAEEILKKAAENIQNKDLKEMIVQGF 868 Query: 353 RSHHGSVSKEQRAITEQALKSGE----LRCVVATSSLELGIDMGAVDLVI---QVATP-- 403 HH +S++ R I E ++ +V T++L G++M A ++I QV +P Sbjct: 869 AVHHAGLSRDDRDIVENLFFQNRYQKTIKVLVCTATLAWGVNMPASCVIIKGTQVYSPEL 928 Query: 404 -----LSVASGLQRIGRAGHQVGG-VSKGLFFPRTRR-----DLVDSAVIVECMFAGRLE 452 LS +Q +GRAG + + + L++ + +E F + Sbjct: 929 GKWTELSPQDMIQMVGRAGRPGFDLRGESIVITSFQEKNYYLSLLNQQLPIESQF---IS 985 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP 512 L N VL + A+D L Y R+ R+ + ++ +L Sbjct: 986 QLPDQLNAEIVLGTVSNIKEAVDWLGYTYLYIRMLRSPKVYHISDEEYEND-RLLVKHRA 1044 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVG 572 + + G++ + TS G I E K + +G Sbjct: 1045 N----LIHSAATLLDKYGLIKYDKKTGIFQSTSLGKISSHYYIKYPSMEIYNKHLKQNMG 1100 Query: 573 ELDEEMVYES 582 ++ V+ Sbjct: 1101 VIELLKVFSL 1110 Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats. Identities = 97/592 (16%), Positives = 197/592 (33%), Gaps = 97/592 (16%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYA 65 P+S L F +Q Q + +SE+ + APTGSGKT + Sbjct: 1421 PTSEL--RFPEGEAVLKELGITTFNKIQTQVLNQFYSQSENIFLGAPTGSGKTACIIVAM 1478 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + +++Y++P +++ ++ + K + Sbjct: 1479 LR----------IFKTYYENKKVIYVAPFESICQNMYKLFSKAFKHL------------G 1516 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE----TLRGVETVIIDEV 181 +V I TG T DI+I+TPE+ + T + ++ + ++ I DE+ Sbjct: 1517 KKVAILTGQTKTD---NQIFTKYDIIISTPENWD-INTRKWKKTQQIINKNIKLFIADEL 1572 Query: 182 HAVAGSKRGAHLALSLERLDAL-----------------LHTSAQRIGLSAT-VRSASDV 223 H + + + + R+ ++ + Q IGL AT V ++ Sbjct: 1573 HMLNECN--STYEVIVSRMRQFSSLLSSKSEGKQEGKKEVNHNFQIIGL-ATSVADYKEM 1629 Query: 224 AAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIET 283 A+++G + T P +R + + + +G + R S+ ++ Sbjct: 1630 ASWIGANPSNTFNFSPDVRPYPVDLHI------------TGFEQHHRKARLISMQKHMYQ 1677 Query: 284 GI-LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN 342 G+ L + I+F + R A+ L L A + V + + + Sbjct: 1678 GLKLFLKSPQQQGIIFVSDRKQAKITAIDLQTLAAGDNNPQKFLKVPYDSIQEIVESLRD 1737 Query: 343 -RVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI--- 398 ++ S + + +S+++R + E +SG ++ +++T L +++ + ++I Sbjct: 1738 LSLRQSLKYGVGFIYEGMSEQEREVVESLYQSGAIQVLISTYKLCWELNLHSQVVIILDN 1797 Query: 399 -------QVATPLSVASGLQRIGRAGHQVGGV----------SKGLFFPRTRRDLVDSAV 441 + ++ LQ I +K L F + + Sbjct: 1798 QRYDGREKRYIDYTIPDMLQMI-----AYAKSKNASAQNAQAAKCLVFCHSPKKEYYKKF 1852 Query: 442 IVECM-FAGRL-ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRV 499 + E L EN+T + T A +D Y R+ + + L Sbjct: 1853 LFEPFPVESILSENITNHICGEIYAERITSLPACIDWSTWTFMYRRLSQNPYFYGLREVS 1912 Query: 500 FDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI 549 A D L + K V E L + TI Sbjct: 1913 GPAINDFLCDLFEKAIEYLIEYKCVKELEQHNLALLSLGSIAGYYYIDVQTI 1964 >UniRef50_Q9FNQ1 RNA helicase n=14 Tax=Viridiplantae RepID=Q9FNQ1_ARATH Length = 2157 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 101/552 (18%), Positives = 198/552 (35%), Gaps = 62/552 (11%) Query: 19 TRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 +K +Q + + + E+ LV APTG+GKT A + L + + + Sbjct: 497 FAQAAFHGYKSLNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHFRDGY 556 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 + +I+Y++P+KAL +V L +N+ V TGD Sbjct: 557 LH---KNEFKIVYVAPMKALAAEVTSAFSRRLA------------PLNMVVKELTGDM-- 599 Query: 138 QERSKLTRNPPDILITTPESLYLMLTSRARETLR-GVETVIIDEVHAVAGSKRGAHLALS 196 + +K +++TTPE ++ + ++ V+ +IIDEVH + RGA + Sbjct: 600 -QLTKTELEETQMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLNDD-RGAVIEAL 657 Query: 197 LERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVA 253 + R + ++ + +GLSAT+ S VA FL + + + P Sbjct: 658 VARTLRQVESTQTMIRIVGLSATLPSYLQVAQFLRVNTDTGLFYFDSSYRPV-------- 709 Query: 254 NMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLN 313 ++ G E + A R + ++D + + ++F +SR K +L Sbjct: 710 ---PLAQQYIGITEHNFAARNELLNEICYKKVVDSIKQGHQAMIFVHSRKDTSKTAEKLV 766 Query: 314 ELYAARLQRSPSIAVD----AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQ 369 +L + + + + HH + + R +TE+ Sbjct: 767 DLARQYETLDLFTNETHPQFQLMKKDVMKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTER 826 Query: 370 ALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGH- 418 G L+ +V T++L G+++ A +VI+ L + +Q GRAG Sbjct: 827 LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRP 886 Query: 419 QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 Q +G+ + L+ S + +E F + +L N VL T A Sbjct: 887 QFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQF---ISSLKDNLNAEVVLGTVTNVKEA 943 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP----SGDFSAFRPKLVWNRET 529 L R++ + A + + + + ++ ++ Sbjct: 944 CAWLGYTYLSIRMKLNPLAYGIGWEEIIADPSLSLKQRALVADAARSLDKAKMMRFDEKS 1003 Query: 530 GILTARPGAQLL 541 G ++ Sbjct: 1004 GNFYCTELGRVA 1015 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 106/546 (19%), Positives = 198/546 (36%), Gaps = 64/546 (11%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAF 62 P P + L + + F +Q Q +HV +++ LV APTGSGKT++A Sbjct: 1335 KPLPVTSLGNKLYESL-----YKFSHFNPIQTQIFHVLYHTDNNVLVGAPTGSGKTISAE 1389 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L + +++YI+P+KA+ + + + L Sbjct: 1390 LAMLRLFSTQ-----------PDMKVVYIAPLKAIVRERMNDWKKHL-----------VA 1427 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEV 181 + + TGD + DI+I+TPE + + R ++ V VI+DE+ Sbjct: 1428 PLGKEMVEMTGDYTPD---LVALLSADIIISTPEKWDGISRNWHTRSYVKKVGLVILDEI 1484 Query: 182 HAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 H + G+ RG L + + R+ + S + +GLS + +A D+A +LG Sbjct: 1485 HLL-GADRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADWLGVGEIGLFNFK 1543 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 P++R I + + G + R S+ I + ++F Sbjct: 1544 PSVRPVPIEVHI------------QGYPGKYYCPRMNSMNKPAYAAIC-THSPTKPVLIF 1590 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQSSDVFIARSHHG 357 +SR L + A+ ++V + S T ++ + F HH Sbjct: 1591 VSSRRQTRLTALDLIQFAASDEHPRQFLSVSEEDLQMVLSQITDQNLRHTLQFGIGLHHA 1650 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVA 407 ++ R+ E+ + +++ +V+TS+L G+++ A ++I+ + Sbjct: 1651 GLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLT 1710 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM-FAGRL-ENLTPPHNPLDVL 464 LQ +GRAG Q K + + + E L E L N V Sbjct: 1711 EILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEKLHDHFNAEIVS 1770 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG-DFSAFRPKL 523 A+ L + R+ + L + LS + + L Sbjct: 1771 GTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETICSYLSRLVQTTFEDLEDSGCL 1830 Query: 524 VWNRET 529 N ++ Sbjct: 1831 KVNEDS 1836 >UniRef50_B8YFQ3 Meiotic helicase n=2 Tax=Sordaria macrospora RepID=B8YFQ3_SORMA Length = 1561 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 116/551 (21%), Positives = 195/551 (35%), Gaps = 56/551 (10%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALD 67 LP F ++ AVQ + + V +++ ++ APTGSGKT L Sbjct: 254 QALPSRFQEVF------PYELLNAVQSKCFGVVYGSTDNVVISAPTGSGKTAILELAICK 307 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 G + +I+Y +P KAL ++ R+ + L+ Sbjct: 308 LALDRG---------NENFKIVYQAPTKALCSEKARDWVKKFSHM------------GLK 346 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVA 185 TGDT E ++ I++TTPE + R+ L+ VE +IDEVH + Sbjct: 347 CAELTGDTSQAEMRRV--GEASIIVTTPEKWDSITRKWQDHRKLLQLVELFLIDEVHILK 404 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 RGA L + R+ + + + + LSATV ++ D+A +LG R T PA R Sbjct: 405 DV-RGATLEAVVSRMKTI-GANVRFVALSATVPNSDDIAKWLG--RNHTTQQLPAHREVF 460 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V + S P +L + + + +VF +R Sbjct: 461 GEEFRPVKLQKFVYGYECNGNDFIFDKFMDSKLP----KLLSKHSQRKPILVFCFTRKSC 516 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E A L E + + + + S +Q F HH + + R Sbjct: 517 ESTAAMLAEDASKLSESKALWPI----PKKRIPVVSRELQEIVQFGVAFHHAGLDAQDRV 572 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAG 417 EQ +GEL + TS+L +G+++ +V++ S +Q +GRAG Sbjct: 573 AIEQHFLNGELSVICCTSTLAVGVNLPCHTVVMKGTVAFMDDKLQEYSDLEVMQMLGRAG 632 Query: 418 H-QVGGVSKGLFFPRTRRDL-VDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + R + V + + L NL N L + ++A Sbjct: 633 RPQFDTSATAIILTRAANKQRYEKMVSGQEILESTLHLNLIEHLNSEICLGTISDISSAK 692 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFD-ATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 L R+RR L + + A +D D + + + Sbjct: 693 MWLGGTFLSVRLRRNPDHYRLTGDISNPAQIDDKLEEICERDIKLLQNTQLVTADAKFKC 752 Query: 534 ARPGAQLLAVT 544 G + Sbjct: 753 TEYGRAMSKYM 763 >UniRef50_B2A401 DEAD/DEAH box helicase domain protein n=6 Tax=Firmicutes RepID=B2A401_NATTJ Length = 711 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 160/770 (20%), Positives = 290/770 (37%), Gaps = 118/770 (15%) Query: 20 RDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTR 78 + + + + T VQ +T + + + +V + T SGKT A FL L ++ ++ Sbjct: 14 KKIWEMGWDEFTPVQDKTIPIVMNTNKDVVVSSGTASGKTEAVFLPILSQIEKDAT---- 69 Query: 79 EAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQ 138 K +ILYISP+KAL D + + + + GD Sbjct: 70 -----KDLKILYISPLKALINDQFERIIKLCEKSY------------IPIHRWHGDVNQN 112 Query: 139 ERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSKRGAHLAL 195 ++ +LT+NP IL TPES+ + +R E L +E +IIDE+HA ++RG HL Sbjct: 113 KKKQLTKNPAGILQITPESIESLFINRTNELNYILSDIEFIIIDELHAFLDNERGVHLRS 172 Query: 196 SLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANM 255 L RL+ + + LSAT+ + + ++ + V I+ + Sbjct: 173 LLSRLENYIKEKPRYFALSATLNNFKLIKEWINYNDIKNV-----------EIIDSNEDD 221 Query: 256 DDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNEL 315 D+ + + ++ + + ++F NSR E+ T LN L Sbjct: 222 KDLLLSLMHFDKGKDYKKPIDLYQDLRELTKNVHS-----LIFCNSRAEVEETTLYLNRL 276 Query: 316 YAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS-G 374 + + +HH S+ K++R E+ + + Sbjct: 277 ANREVNTELYL---------------------------AHHSSIDKKEREYVEKTMANSK 309 Query: 375 ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR 434 + VV TSSLELGID+GA+D V+Q+ +V+S QR+GR+G ++G + T Sbjct: 310 SPKSVVTTSSLELGIDIGAIDYVVQIDDTHTVSSLKQRLGRSGRKLGTNQVLQVYSTTND 369 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWK 493 LV S +++ + +E T PLD+L Q ++ + +++D ++ A + Sbjct: 370 SLVQSLAVIDLLLEKWIEPATEYPLPLDILFHQIISICHEANGVRLDPLIDNIKANAAFY 429 Query: 494 DLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRG 553 L + ++ + +V +L + Sbjct: 430 KLKEEDINHVINYMIENDFLQLIRNSAELIVGLEGERLLRGK-----------------E 472 Query: 554 MYSVL--LPEGEEKAGSRRVGELDEE-MVYESRVNDIITLGATSWRIQQITRDQVIVTPA 610 Y+V E E + G R++G +D+ MV E D I L W I+ I ++ I+ A Sbjct: 473 FYAVFMTQEEFEVREGIRKIGSIDKSLMVSE---GDNIILAGQLWTIKNIDIERDIIYVA 529 Query: 611 PGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE 670 + P + G G ++ E + L + F L E+ + Sbjct: 530 KAVDGKPPKYSGGGFILNPKIPERMHKILCERKNFEFIDNMAQNHLEEQRKPFEL----- 584 Query: 671 EQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADAS 730 I P ER GD I+ + G ++ + A + + + Sbjct: 585 -----YNIKPN------ERVIWNNGD-EILFETYTGTKIFQTLAWIL-----RSYNVNIK 627 Query: 731 VVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARF 780 DGI + LP + E + + + + F ++F Sbjct: 628 ---EIDGIGRINIEGGIDLPGVLQDIKETDWRPEYLLDFTLEQEKFKSKF 674 >UniRef50_B8MAK5 DEAD/DEAH box DNA helicase (Mer3), putative n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MAK5_TALSN Length = 1363 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 107/560 (19%), Positives = 204/560 (36%), Gaps = 60/560 (10%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYA 65 + LPD F + AVQ + + ++ + +V APTGSGKT+ L Sbjct: 143 ETKQLPDRFRALF------PYPLLNAVQSKCFPHVYENDYNVVVSAPTGSGKTVIMELAV 196 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + K +++Y +P +AL ++ R+ + Sbjct: 197 CRLV---------NNLKDGLFKLVYQAPTRALCSERFRDWSKKFASL------------G 235 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVH 182 L+ TGDT + I+ITTPE M T R R+ ++ V+ +IDEVH Sbjct: 236 LQCAELTGDTDYAQSR--LVQTASIIITTPEKWDSM-TRRWRDHSKLMQLVKLFLIDEVH 292 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + + RGA L + R+ ++ ++ + I LSAT+ ++ D+A +LG + + + PA + Sbjct: 293 VLNET-RGAALEAVVSRMKSV-GSNVRFIALSATIPNSEDIATWLGKNDM--LQHLPAHK 348 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P V + + GS P I+ + + ++F +R Sbjct: 349 EHFGEDFRPTKLQKFVYGYPCTGNDFAFDRLLGSKLPE----IISKHSNRKPMMIFCCTR 404 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 A L +L++ + + A + +++ HH + + Sbjct: 405 NSAISTAKELAKLWSNTIPQRRLWAGPVR----MPAVKNTDLKAFVASGVAFHHAGLDSD 460 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIG 414 R E+A G++ + TS+L +G+++ ++I+ + +Q +G Sbjct: 461 DRHAVEKAFLEGKISIICCTSTLAVGVNLPCYLVIIKNTVCWQEGGCKEYTDLEMMQMLG 520 Query: 415 RAGH-QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAA 471 RAG Q + + + R + + + L NL N L + Sbjct: 521 RAGRPQFDDTAVAVILTKKERVSIYEQMISGTMQLESCLHLNLIDHLNAEISLGTVSDIQ 580 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 +A+ L + R+RR L D + + + + + R G Sbjct: 581 SAVKWLAGTFLFVRLRRNPTRYKLKENADRRDEDEMLQQICEKNVKLLQDAELVVR-GGA 639 Query: 532 LTARPG--AQLLAVTSGGTI 549 + P A T+ Sbjct: 640 FKSTPWGEAMARYYIKFETM 659 >UniRef50_C4JI59 Potential translation-regulating helicase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JI59_UNCRE Length = 1899 Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 111/555 (20%), Positives = 204/555 (36%), Gaps = 66/555 (11%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR-------EGGE 75 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + R E + Sbjct: 272 FKGYKTLNRMQSLLYDVAYKTNENMLICAPTGAGKTDAAMLTILNTVARYTLPSPLEEPD 331 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 + + +I+Y++P+KAL +V L L + + V TGD Sbjct: 332 ASEFLVQTDEFKIVYVAPMKALAAEVTEKLGKRLAWL------------GIEVRELTGDM 379 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHL 193 + +K I++TTPE ++ E ++ V +IIDEVH + +RGA + Sbjct: 380 ---QLTKQEIVQTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVI 435 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + IGLSAT+ + DVA FL +R + A Sbjct: 436 ESLVARTQRQVESTQSLIRIIGLSATLPNYLDVADFLKVNRMAGLFYFDASFR------- 488 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV V G+ ++ + D + + +VF +SR Sbjct: 489 PVPLEQHFVGV---KGDPGSKKSRENLDLVTFEKVRDMLEQGHQVMVFVHSRKDTVNTAR 545 Query: 311 RLNELYAARLQRSPSIAVD----AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + ++ A VD + + ++ +HH + + R + Sbjct: 546 LIAQMAADEQCSDLLSPVDHENYSQALRELKTSRGREIRDLVPKGLGTHHAGMPRSDRNL 605 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT----------PLSVASGLQRIGRA 416 E+ G ++ + T++L G+++ A +VI+ L + LQ GRA Sbjct: 606 MERLFAEGVIKVLCCTATLAWGVNLPAAAVVIKGTQLYNPQEGKFIDLGILDVLQIFGRA 665 Query: 417 GHQVGGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + F T L + S +E F+ +L N L T Sbjct: 666 GRPQFQDTGIGFICTTHNKLQHYISAITSQEPIESRFSRKL---VDNLNAEISLGTVTSV 722 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFRPKLVWN 526 + L + R+RR + ++ R + +++N Sbjct: 723 TEGVQWLGYSYLFVRMRRNPHSYGIDWSEIRDDPHLVQRRRDLIIKAARVLQQSQMIIFN 782 Query: 527 RETGILTARPGAQLL 541 T L ++ ++ Sbjct: 783 EGTEELRSKDVGRIA 797 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 99/511 (19%), Positives = 192/511 (37%), Gaps = 61/511 (11%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P S L + P+ + + + F+ +Q Q +H + + L+ +PTGSGKT+AA L Sbjct: 1080 PLPISALKN---PSLEEIYGQRFQFFNPMQTQIFHTLYHTSANVLLGSPTGSGKTVAAEL 1136 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 ++ S+I+YI+P+KAL + ++ + L Sbjct: 1137 AM-----------WWAFREKPGSKIVYIAPMKALVRERVQDWRRRLA-----------IP 1174 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + L++ TGD R+ D++ITTPE + S + R +R V VIIDE+H Sbjct: 1175 LGLKLVELTGDNTPDTRT---IRNADMIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIH 1231 Query: 183 AVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G RG L + + R++ + + + +G+S +A+D+ +LG + + Sbjct: 1232 LLGGD-RGPILEIIVSRMNYIASQNKGSVRLLGMSTACANATDLGDWLGVKQGLYNFR-- 1288 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 V PV + G S+ + + IVF Sbjct: 1289 -------HSVRPVPLEIYIDGFPEQRG---FCPLMQSMNRPTF-LAIKNHSPDKPVIVFV 1337 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGS 358 SR L + + ++ + + ++ + F HH Sbjct: 1338 ASRRQTRLTAKDLINFCGMEDDPRRFVHMSEDDLQANLARVKDDALREALSFGIGLHHAG 1397 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVAS 408 + + R ++E+ + +++ ++ATS+L G+++ A +V++ + + Sbjct: 1398 LVESDRQLSEELFANNKIQILIATSTLAWGVNLPAHLVVVKGTQFFDAKIEAYRDMDLTD 1457 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM-FAGRLENLT-PPHNPLDVLA 465 LQ +GRAG Q F + + + L + Sbjct: 1458 VLQMLGRAGRPQFDSSGIARIFTQDAKKAFYKHFLHTGFPVESTLHKVLDDHLGAEVSAG 1517 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 T A+D L ++ R+ + + L Sbjct: 1518 TITTKQDALDYLTWTFFFRRLHKNPSYYGLE 1548 >UniRef50_B2WF75 Activating signal cointegrator 1 complex subunit 3 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WF75_PYRTR Length = 1810 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 113/565 (20%), Positives = 211/565 (37%), Gaps = 68/565 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR-------EGGE 75 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + + + + Sbjct: 274 FKGYKSLNRMQSLVYPVAYKTSENMLICAPTGAGKTDAAMLTILNTVAKNVVPNPIDEPD 333 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 T + +++Y++P+KAL +V L L + ++ TGD Sbjct: 334 ATDFTVMAEDFKVIYVAPMKALAAEVTEKLGKRLAWL------------GIKARELTGDM 381 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHL 193 +K I++TTPE ++ E ++ V +IIDEVH + +RGA L Sbjct: 382 ---HLTKAEILDTQIIVTTPEKWDVVTRKSTGDTELVQKVRLLIIDEVHMLHD-ERGAVL 437 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + +GLSAT+ + DVA FL ++ + A P V Sbjct: 438 ESLVARTQRQVESTQSLIRIVGLSATLPNYVDVADFLRVNKMAGLFYFDASFRP-----V 492 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 P+ G+ A ++ +++ + +VF +SR K Sbjct: 493 PLEQ-----HFIGAKGKPGTAKSRENVEKVAFDKVVEMLKLGHQIMVFVHSRKDTVKTAR 547 Query: 311 RLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 RL E+ D +E + ++ +HH + + R + Sbjct: 548 RLYEMAMEEQCTDLFDPQDHPRYENAVRDMKQSKGRELRELLGKGMGTHHAGMPRSDRNM 607 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRA 416 E+ G L+ + T++L G+++ A ++I+ T L + LQ GRA Sbjct: 608 IERLFAEGVLKVLCCTATLAWGVNLPAAAVLIKGTQVYNAQEGKFTDLGILDVLQIFGRA 667 Query: 417 GHQVGGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G S F T L V +E F+ +L N L T Sbjct: 668 GRPQFQDSGIGFICTTHDRLDHYMRAVTEQQPIESRFSSKL---IDNLNAEISLGTVTTV 724 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFRPKLVWN 526 + A+ L + R++++ + ++ R + +++N Sbjct: 725 SEAVTWLGYSYLFVRMQKSPLMYGIEWAEIRDDPQLVGRRRKLIIDAARILQRSQMIIFN 784 Query: 527 RETGILTARPGAQLL--AVTSGGTI 549 T L A+ ++ +I Sbjct: 785 ETTEDLRAKDVGRIASQYYVQQSSI 809 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 105/576 (18%), Positives = 199/576 (34%), Gaps = 72/576 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P + L + P + + + F+ +Q Q +H + + L+ +PTGSGKT+AA L Sbjct: 933 PLPIAALKN---PLLEEVYAQRFQYFNPMQSQIFHCLYHTPANVLLGSPTGSGKTVAAEL 989 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 ++ S+++YI+P+KAL + ++ L G Sbjct: 990 AM-----------WWAFREKPGSKVVYIAPMKALVRERVQDWGKRLAG-----------P 1027 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + L++ TGD R+ DI+ITTPE + S + R +R V VIIDE+H Sbjct: 1028 MGLKLVELTGDNTPDTRT---IRDADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIH 1084 Query: 183 AVAGSKRGAHLALSLERLDALLHTS----AQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 + G RG L + + R++ + + +G+S +A+D+ +LG + Sbjct: 1085 LLGGD-RGPILEIIVSRMNYIASQKKDGSIRLLGMSTACANAADLGNWLGVKEGLFNFR- 1142 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 V PV + G S+ + + IVF Sbjct: 1143 --------HSVRPVPLEIFIDGFPEQRG---FCPLMQSMNRPTF-LAIKAHSPEKPVIVF 1190 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHG 357 SR L + + + ++ + F HH Sbjct: 1191 VASRRQTRLTARDLINFCGMEDNPRRFLRMSEDDLAVNLDRVKDDSLREALSFGIGLHHA 1250 Query: 358 SVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVA 407 + + R+++E+ + +++ +VATS+L G+++ A +V++ + + Sbjct: 1251 GLVETDRSLSEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAKTEGYKDMDLT 1310 Query: 408 SGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM-FAGRLENLTP-PHNPLDVL 464 LQ +GRAG Q F + + + L + Sbjct: 1311 DVLQMLGRAGRPQFDDSGIARIFTQDAKKEFYKHFLHTGFPVESSLHKVLDNHLGAEISA 1370 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA--------TLDMLSGRYPSGDF 516 A+D L ++ R+ + + L + D + + Sbjct: 1371 GTIATKQDALDYLTWTFFFRRLHKNPSFYGLEISAEEHNTIAAQAMANDYMVELVETSLK 1430 Query: 517 SAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIP 550 TG + P ++ + TI Sbjct: 1431 ELDESSCAVVEPTGEVDPTPLGKIMSYYYLNHKTIR 1466 >UniRef50_B2VW28 ATP-dependent DNA helicase MER3 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VW28_PYRTR Length = 1560 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 103/559 (18%), Positives = 202/559 (36%), Gaps = 55/559 (9%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLY 64 P LPD + AVQ + + +++ + ++ +PTGSGKT+ L Sbjct: 223 LPVITLPDRLRTVF------PYPTFNAVQSKCFERMFQTDDNFVLASPTGSGKTVILELA 276 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 + +++Y +P KAL + QR+ + T++ Sbjct: 277 ICRAIATNATNQY---------KVVYQAPTKALCAERQRDWEAKF------------TKL 315 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVH 182 L+ TGDT + + +I+ITTPE M + +R ++ +IDEVH Sbjct: 316 GLKCAELTGDTDVSDLQSV--QSANIIITTPEKWDSMTRKWKDHEKLMRLIKVFLIDEVH 373 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + RGA L + R+ ++ T+ + + LSATV + D+AA+LG + + PA Sbjct: 374 ILRED-RGATLEAVVSRMKSI-GTNVRFVALSATVPNFQDIAAWLGKNSLEPDI--PAAN 429 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 PV V A D + + ++ + +VF +R Sbjct: 430 ESFSEEFRPVKLKKHVCGYAYTGINDFGFEK---VLDGKLPEVIATYSERKPIMVFCATR 486 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 + +A++ + + + ++ + HH + + Sbjct: 487 ASTINTATLIANWWASKAGQGRFWNRPSKTLPLH----NKELRDTVASGVAFHHAGLDLD 542 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIG 414 R E+ +GE+ + TS+L +G+++ ++I+ S +Q +G Sbjct: 543 DRMQVERGFIAGEINVICCTSTLAVGVNLPCHLVIIKNTMVWGGGRLQEYSDLEMMQMLG 602 Query: 415 RAGH-QVGGVSKGLFFPRTRRD-LVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAA 471 RAG Q + + R + D V + + +L NL N L Sbjct: 603 RAGRPQFDDTAVAVIMTRQTKARRYDMLVTGQQLIESKLHLNLVDHLNAEIGLGTIQDPL 662 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 +A L+ + R+++ + L +++ S D + + + + + Sbjct: 663 SARKWLRGTFLFVRLQKNPGYYKLEGARSGQSIEEQVDDICSRDITLLQEINLVSGQEDF 722 Query: 532 LTARPG-AQLLAVTSGGTI 549 G A T+ Sbjct: 723 KCTEFGHAMARYYVHYETM 741 >UniRef50_D2VZX0 Dead box RNA helicase n=1 Tax=Naegleria gruberi RepID=D2VZX0_NAEGR Length = 2295 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 107/585 (18%), Positives = 195/585 (33%), Gaps = 70/585 (11%) Query: 2 ADNPDPSSLLPDVFSPATRDWFL---RAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGK 57 P V DW + + VQ ++ A ++ E+ LV APTG GK Sbjct: 539 PAPKKREDNTPLVPISIFEDWAQLAFKGYTHLNRVQSDVFYSAYKTSENMLVCAPTGCGK 598 Query: 58 TLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T A + L + + +R+ +I+YI+P+KAL ++ N L Sbjct: 599 TNIAMMTVLREIGQH---FKGGKIRREEFKIIYIAPMKALAAEMVENFSKRLA------- 648 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV-ETV 176 + + V TGD +R +++TTPE + + + L + + Sbjct: 649 -----PLGITVKEMTGDMQLTKREVQQ---TQMIVTTPEKWDVTTRKASDQALIQLTRLI 700 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPV 233 IIDEVH + RG + + R + T+ + +GLSAT+ + DVA FL D Sbjct: 701 IIDEVHLLNED-RGPVIESIVARTLRQVETTQSMIRLVGLSATLPNYMDVANFLRVDPHS 759 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 + P + G + R L + R + Sbjct: 760 GLHFFDGSYRPV-----------PLEQSFIGVSIRNPIARNKEYNQIAFNRTLKNLKREK 808 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF-------ESTSGATSNRVQS 346 +VF +SR L +L A +S + ++ Sbjct: 809 QVMVFVHSRKETSTTAKALIDLAVEENALDMLTAGVKMSEHTRKWVTKSLEKCHNRELKE 868 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----- 401 HH + + R + E+ G +R + TS+L G+++ + +I+ Sbjct: 869 LVPKGLGIHHAGLVRSDRNLVEKLFSEGIIRVLCCTSTLAWGVNLPSYCCIIKGTEVYNA 928 Query: 402 -----TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGR 450 T L + +Q GRAG Q +G+ +L+ + +E Sbjct: 929 EKSTMTELGMLDIMQIFGRAGRPQFDVEGEGVIITSYEVLPRYLNLLKRNLPIESQMTQ- 987 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFD---ATLDML 507 +L VL + L + R+R+ + + + M Sbjct: 988 --DLANHLCAEIVLGTVSNVREGCLWLNYTYLFLRMRQNPMNYGILPEEVKLDPSLIGMR 1045 Query: 508 SGRYPSG-DFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI 549 ++++ TG+++A ++ TI Sbjct: 1046 KSLIEKACKMLQESKMIIYDERTGVVSATDLGRIASHFYIHYETI 1090 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 109/572 (19%), Positives = 211/572 (36%), Gaps = 68/572 (11%) Query: 1 MADNPDPSSLLPDVFSPATRD-WFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKT 58 + +P P + L + P + + K VQ Q +H+ + E+ L+ APTGSGKT Sbjct: 1407 LPLDPLPITCLNN---PEYEKLYADKGIKYFNPVQTQIFHMTYHTDENILIGAPTGSGKT 1463 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 LAA L + + +++YI+P+KAL + + Sbjct: 1464 LAAELCIFR-----------LFNTKPNQKVIYIAPLKALVRERLVEWEKKF--------- 1503 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVI 177 ++ ++ TGD + DI+ITTPE + + R +R V ++ Sbjct: 1504 --VQKLGKKMVELTGDFTPDVK---LLKEADIVITTPEKWDGISRNWQNRSYVRDVGLIV 1558 Query: 178 IDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 +DE+H + GS RGA L + R+ + T + +GLS + +A+D+A +LG + Sbjct: 1559 MDEIHLL-GSGRGAILEVITSRMRYISWNTQTHIRLMGLSTNMANATDLADWLGVGQRGL 1617 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 ++R ++I + SG ++ R S+ IL ++ Sbjct: 1618 FNFKSSVRPVPLQISI------------SGFSGKNYCPRMNSMNKPAYQAILR-HSNNKP 1664 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA-AHFESTSGATSNRVQSSDVFIAR 353 ++F +SR L +A + +D + A ++ + Sbjct: 1665 CLIFVSSRRQTRLTAMDLIGYCSADENPHRFLRMDQNEVISALELARDTHLKQFLQYGIG 1724 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATP 403 HH ++ + + E+ SG+++ +VATS+L G+++ A ++I+ Sbjct: 1725 IHHAGLTPSDKKLVEELFHSGKIQVLVATSTLAWGVNLPAYFVIIKGTEFFEPSTKRYED 1784 Query: 404 LSVASGLQRIGRAGHQVGGVSKGLFFPRTR------RDLVDSAVIVECMFAGRLENLTPP 457 + LQ GR+G +F + + +E +L Sbjct: 1785 YPLVDVLQMAGRSGRPGFDTEGRVFIMVHDIKKNFYKRFLYEPFPIESSLHTQLH---DH 1841 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 N V +D L + R+ + + + ++ LS + S Sbjct: 1842 INAEIVSGTIKTKQDCLDYLTWTFMFRRLVQNPCYYGIEDLSYEGLNKWLSTKITSIIDD 1901 Query: 518 AFRPKLVWNRETGILTARPGAQLLAVTSGGTI 549 LV + + + + + T T Sbjct: 1902 LEYAGLVKAIDLNLDKKKRWEVMASQTQSSTF 1933 >UniRef50_B0EE60 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative n=2 Tax=Entamoeba RepID=B0EE60_ENTDI Length = 1799 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 109/610 (17%), Positives = 216/610 (35%), Gaps = 84/610 (13%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYAL 66 S LP+ + K +Q + ++ + LV APTG+GKT A L L Sbjct: 434 ISSLPEWAQRSLT-----PLKYLNRMQSTVYPTVFETDDNVLVCAPTGAGKTTVALLTIL 488 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + + + +I+YI+P+K+L ++ LQ L+ + + Sbjct: 489 HEV-------KKAKETHEQFKIIYIAPMKSLVQEIVGTLQGKLENL------------GM 529 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-------RARETLRGVETVIID 179 +V +GD+ ++ D+++ TPE + ++ ++ +IID Sbjct: 530 KVAEMSGDSSLTKKE---LEETDVIVATPEKIDVITRKIGGLGSGCGHGIFEYLKVMIID 586 Query: 180 EVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVV 236 EVH + + RG L + R+ + ++ + +GLSAT+ + DV FL + V Sbjct: 587 EVHLLHDT-RGPVLEALVARIKLFMESNSKYIRLVGLSATLPNCGDVGIFLNCKKENVFV 645 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 R + G + + + + + + + + Sbjct: 646 FGSEYRPVPL------------QQTFFGVADKKPLKQVQIMNRLTFQKVKESAGK-QQVL 692 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIA 352 +F +SR + + E+ + A E + ++ Sbjct: 693 IFVHSRKDTLETAKYIKEMALQENCLHSFLQNRRASQEVLLSEAKKFDNEELKELIGVGI 752 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP------ 403 HH ++KE R + E L+ +V+T++L G+++ A ++I Q+ +P Sbjct: 753 GIHHAGMNKEDRRLIEDLYADNHLQVLVSTATLAWGVNLPAHTVIIKGTQIYSPPTGRWE 812 Query: 404 -LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTP 456 LS +Q IGRAG Q G+ R L+ + +E F G +L Sbjct: 813 ELSPMDVMQMIGRAGRPQFDKEGTGIIITTQREMFFYMSLLSQQLPIESQFIG---SLVD 869 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YP 512 N V+ + L + +Y + R+ L F + S R + Sbjct: 870 NLNAEVVIGNIKNIDDGIKWLTMTYYYICILRSPLLYGLQPNDFTNDPTLESRRRDLIHT 929 Query: 513 SGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRR 570 + ++++ G + A ++ + TI + L +G + Sbjct: 930 AASLLHANGLAIYDKRKGTINATELGRISSYYYLTTETI---KSMNESLKKGSSEIDLMN 986 Query: 571 VGELDEEMVY 580 + E Y Sbjct: 987 IFSKSSEFKY 996 Score = 86.5 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 72/560 (12%), Positives = 170/560 (30%), Gaps = 111/560 (19%) Query: 27 FKQPTAVQPQTWHVAARSEHALVIAP-TGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F A+Q Q + + ++L IA +GSGKT+ A + L + G+ Sbjct: 1295 FDLFNALQTQLYQAVVETNNSLYIASHSGSGKTVIAEMGLLKHIQEHNGKG--------- 1345 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 +Y+ P D +R+L ++ V + T +E + + Sbjct: 1346 --AIYVMPF-----DEERDL-----------LYLEMKNQSISVEMM--KTDNKEVEEQLK 1385 Query: 146 NPPDILITTPESLYLMLT--SRARET-----------LRGVETVIIDEVHAVAGSKRGAH 192 N +++ S++ + ++ L ++ V G Sbjct: 1386 N-VQVILA---SVHNLERYLRDWKQNGNIIRSIGIIILDDLQRV---------GED--VE 1430 Query: 193 LALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIV 249 + + R+ + + + IGLS + + + +LG + R I + Sbjct: 1431 YEMLISRIKTIQKEYQNNIRIIGLSLPISDSKSMREWLGVTQNNCYSFSMKSRVYPINVQ 1490 Query: 250 VPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLT 309 + + + ++ R ++ + + +++ +++ S+ L Sbjct: 1491 IEIMKQTE------------YSMRLQAMIQPTIELLFNYWKQNKKSVITVPSKKLLLNTV 1538 Query: 310 ARL------NELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 + N++ Q + + +E+ Sbjct: 1539 QQFILLLQKNKIIQFNNQGRVEPKSEIEEIIKQYKIKNEIAIQGICSGIGIIFNGEDEEE 1598 Query: 364 RAITEQALKSGELRCVVAT-SSLEL-------GIDMGAVDLVIQVATPLSVASGLQRIGR 415 + + + + G ++ + T + +E GI MG I+ + V I Sbjct: 1599 KIVIKNLFREGIIKTIFLTFNEIEYFREQADEGILMG----TIKSESNEKVLELE-MI-- 1651 Query: 416 AGHQVGG---VSKGLFFPR-TRRDLVDSAVIVECMFAGRL--------ENLTPPHNPLDV 463 H+ G + + +++ + + RL +NL N Sbjct: 1652 --HKFIGCIKNGSVMIYCEPNKKEYLSKFLEESLPLESRLIQMGNEMYDNLIQLFNTEIA 1709 Query: 464 LAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK- 522 +A++ L +Y R+R + + R + LSG F + Sbjct: 1710 NQTIVDYQSAINLLTSTFFYRRIRSNPSYYFVEGREMSIISNYLSG-LVETVFDKLKEMK 1768 Query: 523 -LVWNRETGILTARPGAQLL 541 + + +T + L Sbjct: 1769 FITIDEQTQTVQPTETGILA 1788 >UniRef50_C5LWR0 U520, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LWR0_9ALVE Length = 1979 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 118/608 (19%), Positives = 215/608 (35%), Gaps = 76/608 (12%) Query: 9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS--EHALVIAPTGSGKTLAAFLYAL 66 LP+ PA + F++ AVQ + + VA E+ L+ APTG+GKT A L + Sbjct: 277 EALPEWACPAFKH-----FERLNAVQSKVFPVAYNEFEENLLMCAPTGAGKTNVAMLTIM 331 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + L + ED + +++YI+P+KAL +V ++ + L + L Sbjct: 332 NVLKQYRTEDGFDTSA---FKMVYIAPMKALVQEVVQSFSLRLGDL------------GL 376 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAV 184 V +GD + +I++TTPE ++ R V+ +IIDE+H + Sbjct: 377 VVKELSGDQSLS---REQIEQTNIIVTTPEKWDVVTRKAGESRGFTALVKLIIIDEIHLL 433 Query: 185 AGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 + RG L + R + + +GLSAT+ + DVA FL + + Sbjct: 434 HDN-RGPVLEAIVARTLRQIEQTQEHVRLVGLSATLPNYKDVALFLRVNLNRGLFYFGQD 492 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 P + G R + + + + ++ I+F +S Sbjct: 493 YRPV-----------PLDQTYVGVSSKKAIKRANVMNEVLFEKVEADAGKN-QIIIFVHS 540 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHF-----ESTSGATSNRVQSSDVFIARSHH 356 R K L ++ + + A E + S + + HH Sbjct: 541 RKDTLKTARELRDMAMEKEMLGKFLPESGASRQIIENEIENTIKSPDLGDLLKYGFGIHH 600 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP-------LSV 406 +++ R E G ++ +V+T +L G+++ A ++I QV +P LS Sbjct: 601 AGMARVDRTTVEDLFADGHIQVLVSTLTLAWGVNLPAHTVIIKGTQVYSPEKGDWVELSP 660 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNP 460 +Q +GRAG Q G+ L ++ + +E L L N Sbjct: 661 MDMMQMMGRAGRPQYDTTGHGIVITNRSELQYYLSLNNTQLPIESQM---LSALPDMINA 717 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 L A+ L + R+ +A +P + + Sbjct: 718 EMALGTIASRDDAVRWLGYTYLHVRMMKAPQLYGVPMGDEEGNPRDDPRLIQH-RVNLCH 776 Query: 521 PKLVWNRETGILTARPGAQLLAVTSGGTI--------PDRGMYSVLLPEGEEKAGSRRVG 572 + + G++ +T+ G + P +Y+ L R+ Sbjct: 777 AAMTMLDKNGLVKYDKRTGQCHITALGRVAAHYYIKYPSMAVYNQHLKPRMSDIELLRLF 836 Query: 573 ELDEEMVY 580 L E Y Sbjct: 837 SLSSEFKY 844 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 102/603 (16%), Positives = 197/603 (32%), Gaps = 92/603 (15%) Query: 1 MADNPDPSSLLPDVFS--------PATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIA 51 + + P + L D+ P F A + +Q QT+ +S+ + L+ A Sbjct: 1109 LPERNPPETELLDLMPLPITALKWPKAEQVFYGATGKLNPIQTQTFTQMFQSDDNTLLCA 1168 Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 P SGK A L L R +Y+ P + L+ Sbjct: 1169 PANSGKLQCAEFAILRMLKEYEI-----------KRCVYMCPF-----ERLAELR----- 1207 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR--ET 169 + + +++ G + V TG+ + + I+IT PE M++ R R + Sbjct: 1208 LTEWQKKFGVDGLGCVVTKLTGEASQDLK---LLDSSHIVITIPEHWD-MISRRWRTRKP 1263 Query: 170 LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH-------------TSAQRIGLSAT 216 ++ V I D++H + + GA + + R+ + + IGL+A+ Sbjct: 1264 VQQVSLFIADDLHLLNHPRIGATMEACVSRMRYITSNLSAQASESGEAFKPCRIIGLAAS 1323 Query: 217 VRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGS 276 + +A+D+ ++G P +R +++++ G S R + Sbjct: 1324 ISNANDLGGWMGAPVSSQFNFPTKIRAVPVKVII------------HGYDIYSRNARMAA 1371 Query: 277 IWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST 336 + I + +VF R + + A L A + + Sbjct: 1372 MTRPTYNLIKAN-SPSQPVVVFVGDRRQSRMVAADLMLQATADNSPDRFRHLSETAMKEH 1430 Query: 337 SGATSNR---------VQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 S + +S + H +S ++R + +SG ++ +V T L Sbjct: 1431 IEGLSKEYGWRTRERGLVTSLMHGIGYMHEGLSNKERDGLMELFESGAVQIMVVTVDLAW 1490 Query: 388 GI-----DMGAVDLVI----------QVATPLSVASGLQRIGRAGHQV-GGVSKGLFFP- 430 G+ + G +V+ + VA ++ + AG + Sbjct: 1491 GLLPQTHNAGCRMVVVMDTVKYDARQRRYVDYDVADVVEMMSIAGRPGIDDHATCALLCP 1550 Query: 431 RTRRDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRA 489 T++D + +L+ LT N V A+D L +Y R+ R Sbjct: 1551 TTKKDYYKKFIYEPMPVESQLDQKLTDHLNAEVVSGTIENKQDAVDWLTWTFFYRRITRN 1610 Query: 490 APWKDLPRRVFDATLDMLSGRYPS-GDFSAFRPKLVWNRETGILTARPGAQL--LAVTSG 546 + L D LS S D A + + L++ + T Sbjct: 1611 PNYYSLQGVSPQEISDFLSEIIESTSDALAQTGCIEIGEDEITLSSTNLGMVAAYYYTRP 1670 Query: 547 GTI 549 TI Sbjct: 1671 STI 1673 >UniRef50_Q9XWI1 Protein Y54E2A.4, partially confirmed by transcript evidence n=5 Tax=Caenorhabditis RepID=Q9XWI1_CAEEL Length = 2017 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 126/672 (18%), Positives = 234/672 (34%), Gaps = 105/672 (15%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + F++ +Q + A ++ E+ L+ APTG+GKT A L L+ + +++R Sbjct: 306 FKGFEKLNVIQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILNTIHEH--QNSRGDIM 363 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 + +I+YI+P+KAL T++ + L + L+V TGDT + S+ Sbjct: 364 KDDFKIIYIAPMKALATEMTESFGKRLA------------PLGLKVKELTGDT---QLSR 408 Query: 143 LTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 +L+ TPE ++ + + V +IIDEVH + +RG + + R Sbjct: 409 NEVADTQMLVLTPEKWDVITRKSTSDNSLINVVRLLIIDEVHLLHD-ERGPVIETLVART 467 Query: 201 DA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 + + + +GLSAT+ + DVA FL + + P VP+ Sbjct: 468 LRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLFFFDGRFRP-----VPLTQKFI 522 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 + A ++ + ++D V R +VF ++R KL + Sbjct: 523 GTRKAGNFRDN-----LTLMDNVCYDEVVDFVKRGHQVLVFVHTRNGTAKLGEAFCARAS 577 Query: 318 ARLQRSPSIAVDAAHFESTSGAT-------SNRVQSSDVFIARSHHGSVSKEQRAITEQA 370 Q + D A + ++ HH + ++ R + E+ Sbjct: 578 VLGQMDLFLPKDRASSKYIQADKAINICRNRAQISPLFQRGMGIHHAGLCRQDRILMERC 637 Query: 371 LKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGHQV 420 G + + T++L G+++ A +VI+ T L V Q GRAG Sbjct: 638 FAEGHVSVLFCTATLAWGVNLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQIFGRAGRPQ 697 Query: 421 GG-VSKGLFFPRTRRDLVDSAVIVECMFAGRLE-----NLTPPHNPLDVLAQQTVAAAAM 474 G+ RD +D + + + +E L N L + + Sbjct: 698 FENEGHGIIITT--RDKIDKYLTM-LVHQNPIESQFYARLHDNLNAEVALGTVSTVDEGV 754 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLD----MLSGRYPSGDFSAFRPKLVWNRETG 530 + L Y+R + + + + + + + ++ T Sbjct: 755 EWLTYTYMYTRALKNPMAYGIAYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRFDMATE 814 Query: 531 ILTARPGAQLLA----------------------VTSGGTIPDR---GMYSVLLPEGEEK 565 L + ++ + VT +PD G+ S+ K Sbjct: 815 YLNSTDLGRIASNFYVKYETIQLLNEAEKGVGLPVTFTSFMPDDMVIGLISMSTEFANLK 874 Query: 566 AGSRRVGELDEEMVY-----------ESRVNDIITL-----GATSWRIQQITRDQVIVTP 609 +G+L+E M Y S + L TS R + +Q+ V Sbjct: 875 CREEEIGDLEELMSYGCMMNVRGGGLASVAGKVNVLLQSLISRTSTRNSALMSEQLYVQQ 934 Query: 610 APGRSARLPFWR 621 GR R F Sbjct: 935 NAGRLCRAMFEM 946 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 116/572 (20%), Positives = 201/572 (35%), Gaps = 69/572 (12%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAF 62 P P L + A F +Q Q + ++ + AL+ APTGSGKTL A Sbjct: 1159 EPLPIKTLKNSKFEAI-----YNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAE 1213 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L +++YI+P+K+L + + + + Sbjct: 1214 LAMFRLL-----------QDHPGMKVVYIAPLKSLVRERVDDWKKKFED----------- 1251 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEV 181 + RV +GD ILITTPE + S A RE +R V +++DEV Sbjct: 1252 GMGYRVVEVSGDVTPDPEE---LAASSILITTPEKWDGISRSWATREYVRRVGLIVLDEV 1308 Query: 182 HAVAGSKRGAHLALSLERLDALLHT------SAQRIGLSATVRSASDVAAFLGGDRPVTV 235 H + G RGA L + RL + + +GLS + +A DVA +LG Sbjct: 1309 HLL-GVDRGAVLEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAGDVAEWLGIPDEACY 1367 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 P++R I + + G + R G + IL + Sbjct: 1368 NFRPSVRPVPISVHI------------QGFPGQHYCPRMGLMNKPAYKAIL-TYSPRKPV 1414 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST-SGATSNRVQSSDVFIARS 354 ++F +SR L A + +D E + ++ + F Sbjct: 1415 LIFVSSRRQTRLTALAFVNLLIADHNPKQWLNMDMLELEDLMAAIKDENLKLTLPFGIGM 1474 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPL 404 HH +S +RAI EQ +++ ++AT++L GI+ A ++++ Sbjct: 1475 HHAGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCPAHLVIVKGTEYFDGKKGKYVDF 1534 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM--FAGRLENLTPPHNPL 461 V LQ +GRAG Q + + + + + + E + L L N Sbjct: 1535 PVTDVLQMMGRAGRPQFDDSAVAVIYVQDAKKTFYKKFLYEPFPVESSLLPVLPNHVNAE 1594 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY-PSGDFSAFR 520 A ++ L Y R+ + L +A L ++ S Sbjct: 1595 ISAGTIDSKQAIVEYLSKTYLYRRLFANPNYYGLEEDSEEAMLKFITKIVDDSVAELLAS 1654 Query: 521 PKLVWNRETGILTARPGAQL--LAVTSGGTIP 550 + + E ++ P ++ + T+ Sbjct: 1655 ECIHVDSEQDVIKPTPCGRIASVYYLQHETVR 1686 >UniRef50_Q24ZT1 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24ZT1_DESHY Length = 720 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 169/763 (22%), Positives = 278/763 (36%), Gaps = 128/763 (16%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 +P +++ + + + AVQ + V SE H L+ A T SGKT AAFL + L Sbjct: 8 RLAPFIQEYIYKHQWTELRAVQVEACRVIFESESHLLLAAGTASGKTEAAFLPVITLLHE 67 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 LYI P+KAL D L L+ +L V Sbjct: 68 SPPLS---------ISALYIGPLKALINDQFARLSDLLEE------------AHLPVWHW 106 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR---GVETVIIDEVHAVAGSK 188 GD ++K+ +NP IL TPESL ML +R+ + LR + ++IDEVHA G+ Sbjct: 107 HGDVSPSHKNKMLKNPQGILQITPESLESMLINRSTDILRLFADLRFIVIDEVHAFMGTD 166 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RG+ + LERL ++ +RIGLSAT+ + +L + P Sbjct: 167 RGSQILCQLERLTRMIGHQPRRIGLSATLGDYAIAEKWLSSGTEKRTITP---------- 216 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 V V +V ++ + + + ++R ++FTN+R AE Sbjct: 217 KVQVGQQKVRLAVEHFYLDEEKK-------MSLYDQYIFDQSKNRKCLIFTNNREQAEYT 269 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 A L +L + HHGS+S R E Sbjct: 270 VATLRQLAEGKRMPDVYH---------------------------VHHGSISAPLREAAE 302 Query: 369 QALKSG-ELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 +A+K E AT +LELGID+G ++ +IQ+ TP SV+S +QR+GR+G + G S+ Sbjct: 303 KAMKESPEPCVTAATITLELGIDLGYLERIIQLETPFSVSSFVQRLGRSGRR-GTPSEMW 361 Query: 428 FFPRT------------RRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTVA-AAA 473 + L+ + I++ +E ++P H P +L QT++ AA Sbjct: 362 LVCKEDEEVNDLLPNQLPWSLLQAIAIIQLYLEERWIEPVSPKHYPFSLLYHQTMSTLAA 421 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 M L RV +P+K++ F L L I Sbjct: 422 MGELVPAALAQRVLTLSPFKNISSEDFRRLLLYLIE------------------IDHIEQ 463 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLL--PEGEEKAGSRRVGELDEEMVYESRVNDIITLG 591 L+ +T + + YSV E + S+ +G + + + L Sbjct: 464 TEERGLLVGLTGEQVVRNFRFYSVFPDNEEFTVRDESKEIGSI----LSPPPKGERFALA 519 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT 651 +W + +I + V P + W G G + + + + L ++ Sbjct: 520 GRTWEVMEIELKRRTVYARPVKGKVRTTWNGGGGSIHSRILQRMKQVLEEDIIYSYLQPG 579 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 L E +A G+++ T I+P +G L G + Sbjct: 580 AVKRLCEARNLARAAGILK-----TNILP-------------LGGNSYCLFPWLGTVAYR 621 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAI 754 + R L+ S + D+ + Sbjct: 622 TLERCLRYRGADLYEIRNVGGLSPYFLTFSTKSGTTIEVDSLL 664 >UniRef50_Q7S600 Putative uncharacterized protein n=2 Tax=Sordariales RepID=Q7S600_NEUCR Length = 1453 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 111/539 (20%), Positives = 189/539 (35%), Gaps = 54/539 (10%) Query: 25 RAFKQPT-AVQPQTWH----VAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTRE 79 F++ + Q T V +++ +V APTGSGKT L Sbjct: 159 HRFRELYGSHQQPTPPMHSVVYGSTDNVVVSAPTGSGKTAILELAICKLALDR------- 211 Query: 80 AHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQE 139 + +I+Y +P KAL ++ R+ + + L+ TGDT E Sbjct: 212 --CNENFKIVYQAPTKALCSEKARDWEKKFSHM------------GLKCAELTGDTSQAE 257 Query: 140 RSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 ++ I++TTPE + R L+ VE +IDEVH + RGA L + Sbjct: 258 MRRV--GEASIIVTTPEKWDSITRKWQDHRRLLQLVELFLIDEVHILKDV-RGATLEAVV 314 Query: 198 ERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 R+ + + + + LSATV ++ D+A +LG R T PA R PV Sbjct: 315 SRMKTI-GANVRFVALSATVPNSDDIAKWLG--RNHTTQQLPAYREVFGEEFRPVKLQKF 371 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 V + +L + + + T++F +R E +L E + Sbjct: 372 VYGYECNGNDFIF----DRFLDGKLPTLLSKHNQRKPTLIFCFTRKSCESTATKLAEHAS 427 Query: 318 ARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELR 377 + + + S +Q F HH + + R EQ +GEL Sbjct: 428 GLSETNSLWPIPTKRI----PVLSRELQEIVRFGVAFHHAGLDVQDRIAIEQHFLNGELS 483 Query: 378 CVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAGH-QVGGVSKGLF 428 + TS+L +G+++ +V++ S +Q +GRAG Q + + Sbjct: 484 VICCTSTLAVGVNLPCHTVVMKGTVAFMDDKLQEYSDLEIMQMLGRAGRPQFDTSATAII 543 Query: 429 FPRTRRDL-VDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRV 486 R L ++ V + L NL N L A+A L R+ Sbjct: 544 LTRAANKLRYENMVSGREILESTLHLNLIEHLNSEICLGTIGDLASAKLWLGGTFLSVRL 603 Query: 487 RRAAPWKDLPRRVFD-ATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 RR L + + + +D D + + + G + Sbjct: 604 RRNPDHYRLTEDISNPSQIDDKIEEICERDIKLLQNTQLVTADAKFKCTEYGRAMSKYM 662 >UniRef50_A7AM78 Sec63 domain containing protein n=1 Tax=Babesia bovis RepID=A7AM78_BABBO Length = 2133 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 126/617 (20%), Positives = 214/617 (34%), Gaps = 89/617 (14%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYA 65 LP+ VQ VA E+ LV APTG+GKT A L Sbjct: 465 IKTLPEWTH-----AAFPGVDSLNPVQSVIADVAFNCFEENMLVCAPTGAGKTNVAVLAM 519 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L L R E +I+YISP+K+L + ++ Sbjct: 520 LSVLDRHRDETGNLNL--HDFKIVYISPMKSLVMEQAQSFSQRFA------------PYG 565 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVA 185 + V TGD + +L+ TPE ++ E + V+ +IIDE+H + Sbjct: 566 ISVRELTGDMSLTRNQLM---DTQLLVVTPEKWDVVTRRSGMENI--VQLIIIDEIHLLH 620 Query: 186 GSKRGAHLALSLERL---DALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 +RG L + R D T + +GLSAT+ + D+A FL D + Sbjct: 621 D-RRGPVLEAIVARTMHNDRRNKTKTRLVGLSATMPNYGDIAEFLRVDPEKGLFYFGNHY 679 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P + G E R + + ++++ ++ +VF +SR Sbjct: 680 RPVG-----------LEQRYIGIKEKKAVKRYNVMNELVYERVMEDAGKN-QVLVFVHSR 727 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGS 358 + + ++ + D+A E + + ++ + HH Sbjct: 728 KETARTAKLIRDMAFKTDNLGIFLHSDSASREILSTESEAIKTTELKELLPYGLGIHHAG 787 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS----------VAS 408 + + R + E G ++ +++T++L G+++ A ++I+ S S Sbjct: 788 LPRSDRKLVEDLFSDGHIQLLISTATLSWGVNLPAHTVIIKGTQVYSPEEGCWTELCPLS 847 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLD 462 Q +GRAG Q KG+ + L + + +E + L N Sbjct: 848 VQQMLGRAGRPQYDKEGKGIIITSHSKLQFYLSLNNQQLPIESQL---VTTLPDLLNAEI 904 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL--PRRVFDATLDMLSGRYPSGDFSAF- 519 VL T A+ L + R+RR + + T DM S R S SA Sbjct: 905 VLGNITTRNDAVTWLGDTYFSIRMRREPRLYSVITDDDDAEPTEDMFSARLESLAHSALL 964 Query: 520 ----RPKLVWNRETGILTARPGAQL--LAVT---SGGT--------IPDRGMYSVLLPEG 562 + + R +G + A P ++ L S T + D + V Sbjct: 965 ELDKHALIRYERRSGAIKATPLGRIASLYYLKPPSVKTYIDNLKPDLSDPDLLKVFAASA 1024 Query: 563 EEKAGSRRVGELDEEMV 579 E + R DEE V Sbjct: 1025 EFRYIPVR----DEERV 1037 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 99/632 (15%), Positives = 198/632 (31%), Gaps = 98/632 (15%) Query: 1 MADNPDPSSLLPDVFSPATR---DWFLRAFK--QPTAVQPQTWHVAA-RSEHALVIAPTG 54 + P P S L ++ R +F++AF A+Q +T+ +S+ L+ AP+ Sbjct: 1306 IDQQPRPVSSLINLPGNCIRLNKQFFIKAFGDHHFNAIQTRTFESIYSQSDTVLLCAPSR 1365 Query: 55 SGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIAD 114 SGK A + + L + + ++ ISP K++ L+ I Sbjct: 1366 SGKFTCAEIAIVRCLSTT-----------ENATVVVISPFKSVQQQRLNRLRHKFGDICQ 1414 Query: 115 ERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGV 173 V GD +T I++ TP + + + L+ V Sbjct: 1415 -------------VKPLVGDVKTD---LVTIAQSTIVVATPRQWDFVSRRWKTKRCLQSV 1458 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGD 230 + +I++ + + G + +S+ R+ + L + +GL V +A D+ A++G + Sbjct: 1459 DLIIVENLELIEDPTVGPEIEVSISRMRFVSAQLGYHTRIVGLGGPVSNALDLGAWIGAN 1518 Query: 231 RPVTV-VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEV 289 P + R V + S E ++ ++ Sbjct: 1519 GNNIFSFRPNSHRT--------VGPKFTIQSFDQWDDETRRFAMFNTVCNFVINTCRTLD 1570 Query: 290 LRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDV 349 +S I+FT R A + + + + + Sbjct: 1571 DDQQSAIIFTVDRRFARLMAMEMLLSLEYTGESLSVAEQLTGECWERLSTRERALGTLVQ 1630 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATS----SLELGIDMGAVDLVI------- 398 H S + + + G ++ ++ T+ ++ + A +VI Sbjct: 1631 AGVGYCHEGFSDAEIRYIQDLYQRGVIKVLICTASAIWTMS----IYAPVVVIADITVSA 1686 Query: 399 ------QVATPLSVASGLQRIGR----------AGHQVGGVSKGLFFPRTRR-----DLV 437 Q P + + R A H+ L + + L+ Sbjct: 1687 TNRPISQSMYPQTDLT------RMLSCAYVSDDAAHRPQ----ALILYESSKRRQLYKLL 1736 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 + A VE R+E L N V A+D L +Y R+ + + + Sbjct: 1737 EDAFPVESCLENRIEELI---NAEIVQGAIESPQDAIDWLTWTLYYRRLTKNPNYYSMQG 1793 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETG-ILTARPGAQLLAVTSGGTIPDRGMYS 556 D LS S S + + V + G TI + Sbjct: 1794 TSAQHMSDHLSELVESTFASLEKAQCVSMDDAGVTPLNLGYIAAFYYLRCRTI--DTFAT 1851 Query: 557 VLLPEGEEKAGSRRVGELDEEMVYESRVNDII 588 + P+ + + + V +E + + R + I Sbjct: 1852 SVTPDMTKGSLIQLVSTAEEFVDIKPRPGERI 1883 >UniRef50_Q5KBS7 RNA helicase, putative n=2 Tax=Agaricomycotina RepID=Q5KBS7_CRYNE Length = 1770 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 115/571 (20%), Positives = 201/571 (35%), Gaps = 65/571 (11%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFRE- 72 SP R F + Q +Q A + E+ L+ APTG+GKT A + + L + Sbjct: 307 LSPIARGCFPKYI-QLNRMQSIVQPTAMNTNENMLICAPTGAGKTDVAIMSIIRVLSQHV 365 Query: 73 ----GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + R +++Y++P+KAL ++ L ++ ++V Sbjct: 366 IDGPTSHPSGFNINRNAFKVIYVAPMKALAAEIVSKFAKRLAWLS------------IKV 413 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAG 186 TGD + +K I++TTPE ++ E V+ +IIDEVH +A Sbjct: 414 RELTGDM---QLTKQEIEETQIIVTTPEKWDVVTRKPTGEGELASKVKLLIIDEVHLLAE 470 Query: 187 SKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 RGA + + R + +S + +GLSAT+ + DV FL +R + A Sbjct: 471 D-RGAVIETIVARTLRQVESSQSLIRIVGLSATLPNYVDVGDFLRVNRYQGLFYFDASFR 529 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 PV V+ G+ A ++ + + + V +VF ++R Sbjct: 530 -------PVPLEQHFIGVS---GKPRSAVSARNMDRVVFEKVSELVEAGHQVMVFVHARR 579 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAH----FESTSGATSNRVQSSDVFIARSHHGSV 359 K L E+ + A S + + ++ HH + Sbjct: 580 DTVKTAQTLKEMALEEGVSTFFQTDGHAKFSQYRAELSKSKNKEMKELFDAGFGIHHAGM 639 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASG 409 + R + E+ + G + + TS+L G+++ A ++I+ LSV Sbjct: 640 LRTDRNMMEKMFEDGCINVLCCTSTLAWGVNLPAHAVIIKGTQVYDTGKGSFMDLSVLDV 699 Query: 410 LQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPP-----HNPLDVL 464 LQ GRAG S F T D VD V M +E+ P N L Sbjct: 700 LQIFGRAGRPGYATSGVGFICTT-HDKVDHYVT-SVMSQTPIESKFIPGMTDALNAEVAL 757 Query: 465 AQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFR 520 T AM L + R+++ + V + + R + Sbjct: 758 GTITNVQEAMQWLSYTYLFVRMKKNPWVYAMAHDVTKDDPQLGNKRNELIVQAARLLQKA 817 Query: 521 PKLVWNRETGILTARPGAQLL--AVTSGGTI 549 + ++ ++ TI Sbjct: 818 RMVRYDDLANTFGITDLGRIAAKYYLRFSTI 848 Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats. Identities = 91/648 (14%), Positives = 189/648 (29%), Gaps = 104/648 (16%) Query: 1 MADNPDPSSLLPDVF--------SPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIA 51 M P S+ + + P + + +Q + + + +A+V + Sbjct: 1145 MPPPPKESTQILGIPFLRRSCFNDPQLEQRYAQTLDTLNTIQSHAFWMLYNTSMNAVVSS 1204 Query: 52 PTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKG 111 P GSGKTL A + K S +L + P + + L+ Sbjct: 1205 PVGSGKTLLAEGAIWNAF-----------RHNKESVVLIMVPERYAVHETVARLRNLCPP 1253 Query: 112 IADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR 171 R + +L P I +TTP ++ + L Sbjct: 1254 KRRVIIRPL--------------FNVSDFDQLLSGGPAIGVTTP--FAVLSNEKIDNFLS 1297 Query: 172 --GVETVIIDEVHAVAGSKRGAHLALSLERLDALLH-TSAQRIGLSATVRSASDVAAFLG 228 + + +++H + L++ ++ + +G ++++ SD+A +LG Sbjct: 1298 TQRLGLYVFEDLHLLDEVY-----ELAVSKILTFARTARTRIVGTTSSLSDPSDLAEWLG 1352 Query: 229 GDRPVTVVN--PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286 D P A + P + P + +S S+ IL Sbjct: 1353 VDPGPLDQWGKPVASQPPALFSFAPSDRGNHISVSIKSFTIPHGPTLLRSMIKPTYD-IL 1411 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQ 345 V I+F S + A L + ++ E ++ Sbjct: 1412 KSVTGG--AIIFVPSVQACATVAADLVTQSGTEMNVDGFLSRPRDEVEPFAERLKDEKLF 1469 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVA------TSSLELGIDMGAV-DLVI 398 + ++ AI + SG +R ++A T + + VI Sbjct: 1470 EPVLHGIGYITRDMAPTDIAIVLELFASGIIRAIIAPRQSCWT--------LPVRGESVI 1521 Query: 399 QVATPLSVASGLQRIGRAGHQVGGVSKG----LFFPRTRRDLV--DSAVIVECMFAGRLE 452 + T G K + ++LV +V Sbjct: 1522 IMGTQYVRMEA--------RPEGKGPKAKPEKHLVSYSAKELVKMQGFAVVSAAPTAPGG 1573 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDE-WYSRV-RRAAPWKDLPRRVFDATLDMLSGR 510 + Q ++ + L ++ + RR+ P + R A + GR Sbjct: 1574 RMFIMCQAEQ---QVMISRVLKEGLPLESKILDLLSRRSTPSSSIDPRAIQALNNFFKGR 1630 Query: 511 YPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR 570 P + RP+ R+ ++ + S + Y ++ +G E G R Sbjct: 1631 RPPPRPTVDRPRRPDGRKADMMDIVNWS----FLSVRVKSNPSYYQLV--KGSEAEGISR 1684 Query: 571 VGELDEEMVYESRVNDIITLGATSWRIQQITRDQVI-VTPAPGRSARL 617 V +D ++ +++ + + + V A + R Sbjct: 1685 V--IDGWF--DAMDGI---------KVETVEEQRRLTVEDAEAQEDRK 1719 >UniRef50_C5JLA1 DEAD/DEAH box DNA helicase n=2 Tax=Ajellomyces dermatitidis RepID=C5JLA1_AJEDS Length = 1313 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 106/594 (17%), Positives = 214/594 (36%), Gaps = 82/594 (13%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDR 68 LPD F +F A+Q + + + + + ++ APTGSGKT L Sbjct: 106 ELPDRFRSIF------SFPVFNAIQSKCFRPIYQGDDNFVLSAPTGSGKTAVMELAICRL 159 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + K +++Y +P K+L ++ R+ Q + ++L+ Sbjct: 160 V---------TNVKDCRFKVVYEAPTKSLCSERFRDWQTKF------------SSLDLQC 198 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETL---RGVETVIIDEVHAVA 185 TGDT + + +I+ITTPE M T + ++ + + V+ +IDEVH + Sbjct: 199 AELTGDTDHAQLRNV--QNANIVITTPEKWDSM-TRKWKDHIKLMQLVKLFLIDEVHILK 255 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 + RGA L + R+ ++ ++ + + LSATV ++ D+ A+LG D T + PA Sbjct: 256 ET-RGATLEAVVSRMKSV-DSNVRFVALSATVPNSEDIGAWLGKDP--TSQHLPAHCERF 311 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV ++++ + + ++F +R A Sbjct: 312 GEEFRPVKLQK-------------------------LPEVMEKHSKKKPIMIFCCTRNSA 346 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 + L +L+ + + + ++++ HH + R Sbjct: 347 IATSKYLGKLWTSTNPPRRLWSGPTK----PVVVQNPELRATISTGVAFHHAGLDASDRH 402 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAG 417 E SG++ + TS+L +G+++ ++I+ +Q +GRAG Sbjct: 403 AVESGFLSGQINVICCTSTLAVGVNLPCHLVIIKNTVSWQDNCCKEYPDLEMMQMLGRAG 462 Query: 418 H-QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + R R + + V L NL N L T +A+ Sbjct: 463 RPQFDDSAVAVILTRKERVNHYEKLVAGTEPLESCLHLNLIDHLNAEIGLGTVTGVESAV 522 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 L ++ R+R+ L + + + + + + E + + Sbjct: 523 RWLTGTFFFIRLRKNPAHYKLKEGANRSDEEEMLKEVCEENIKRLQECSLVTPEEPLRST 582 Query: 535 RPG-AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 G A T+ ++ L P+ + + + DE + + Sbjct: 583 EFGDAMARYYVKFETM---RLFLSLPPKAKMSEILSVLTQSDEFREIRLKAGEK 633 >UniRef50_A2DN52 Type III restriction enzyme, res subunit family protein n=1 Tax=Trichomonas vaginalis RepID=A2DN52_TRIVA Length = 2043 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 115/591 (19%), Positives = 211/591 (35%), Gaps = 83/591 (14%) Query: 13 DVFSPATRDWFLRAFKQ---PTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDR 68 D + R +Q + + S E+ L+ APTG+GKT+ A L + Sbjct: 347 DSLDEKYQTIIGREITSQGSLNLIQSKVYQQIEESNENLLISAPTGAGKTIIAVLAMIKT 406 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L E + +YI+P+K+L ++ G +V Sbjct: 407 LLTENNS-----------KAIYIAPMKSLVQEMVAKFTEIFDGYK-------------KV 442 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-TLRGVETVIIDEVHAVAGS 187 TGD+ A DI+++TPE L ++ + + ++ VIIDE+H + + Sbjct: 443 IELTGDSSASVSQLQG---YDIIVSTPEKLDIISRKTGNQTFIDTIKLVIIDEIHLLH-N 498 Query: 188 KRGAHLALSLERLD---ALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 RG L + RL + + + IGLSAT+ + D+A FL V R Sbjct: 499 SRGPVLEALVARLKMLKYVSSSDIRLIGLSATMPNVGDIAEFLEVPEQGLFVFGEEFRPC 558 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + G E + S+ Y I + + T++F +SR Sbjct: 559 LLHKTF------------VGFKERKKVHLKASMNEYCYQIIEETLKNKHQTLIFVHSRRE 606 Query: 305 AEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 A+ + ++ + + G + +++S HH + +E R Sbjct: 607 AQDTALAFYNMAISKGEADNFSNDQNYLLNISEGIINEKLKSILPKGFAFHHAGLLREDR 666 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VATP-------LSVASGLQRIG 414 + E+ ++ ++ +V+T++L G+++ A +I+ + P LS LQ G Sbjct: 667 SRIEEEFRNKRIKVLVSTATLAWGVNLPAHIAIIKGTNIYNPELGDFDNLSHLDVLQMFG 726 Query: 415 RAGHQV-GGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 RAG + + + S + +E F + T N L Sbjct: 727 RAGRPGLDIYGEAYLLTEHQNLHYYVSALTSQIPIESHFLREI---TNHLNAEIALGTIG 783 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLV-WNR 527 A +D L+ Y R++++ L + V L+ S KL+ +N Sbjct: 784 TVAQGVDWLKETFLYIRMQKSPKMYGLSKNV--KIEQRLADLIHSSCLLLSEKKLIFYNT 841 Query: 528 ETGILTARPGAQLLA------------VTSGGT-IPDRGMYSVLLPEGEEK 565 + + ++ A VT+ T I D + + E K Sbjct: 842 NEDTIESTDIGRIAANYYITEETMSNFVTNLSTDINDVDLLRLFSLASEFK 892 >UniRef50_Q675T1 Putative helicase n=1 Tax=Oikopleura dioica RepID=Q675T1_OIKDI Length = 2017 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 114/527 (21%), Positives = 190/527 (36%), Gaps = 56/527 (10%) Query: 2 ADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLA 60 +P + +Q + A+ + E+ LV APTG+GKT Sbjct: 297 PAVAKEYPRIPIAKLDKISKLVFTGMESLNNLQSIVFDAASNTNENLLVAAPTGAGKTNV 356 Query: 61 AFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 A L L+ + + E K + +I+Y++P+KAL +V Q L+ Sbjct: 357 AMLCVLNVIRQHINEVG--TLKLRDFKIVYVAPMKALAAEVTEKFQSKLR---------- 404 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR--ETLRGVETVII 178 + ++V TGD ++ +L+TTPE ++ R + E + ++ +I+ Sbjct: 405 --CLGIKVREYTGDMNLTKKE---IEETQMLVTTPEKWDVLTRKRIQDVELMSKIKLMIL 459 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTV 235 DE+H + S RGA L + R L++TS + +GLSAT+ + DVA FL + + Sbjct: 460 DEIHLLQDS-RGAVLEALVARTLRLVNTSQQMIRIVGLSATLPNYVDVAKFLRVNLDKGL 518 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 PV V + G + + L + + Sbjct: 519 FFFDGRFR-------PVPLDTRYIGVKARGG---RFAQLNVMNQQAYKIALQHIRNGKQV 568 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHF-----ESTSGATSNRVQSSDVF 350 ++F +SRG K L E + R H A S V + Sbjct: 569 MIFVHSRGATAKTCESLMEQASQEGTRREFEPDPDHHRYHELSRRVKNAKSREVSKFFQY 628 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV--------AT 402 HH + + R++TE+ + G +R + TS+L G+++ A +VI+ Sbjct: 629 GFGCHHAGMIRSDRSLTEKLFEQGLIRVLCCTSTLAWGVNLPAYAVVIKGTEIYVNGQYI 688 Query: 403 PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTP 456 LSV Q GRAG Q + + L+ A +E F L LT Sbjct: 689 DLSVLDVQQIFGRAGRPQFDNSGEATIITTHDKLVHYVSLMIRAAPIESQF---LSKLTD 745 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT 503 N A+ L R+ + L R Sbjct: 746 NLNAEIASGSVANIDDAVRWLSYTYLDIRITKNPFHYGLNREQISDL 792 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 121/606 (19%), Positives = 208/606 (34%), Gaps = 87/606 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P + L + P + F +Q Q +H + +ALV APTGSGKT A L Sbjct: 1159 PIPVTALKN---PDFEALYS--FSHFNPIQTQVFHCLYHHDSNALVGAPTGSGKTACAEL 1213 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L + +YI+P+KAL + + L G ++ Sbjct: 1214 SMLKVF-----------RDYPNGKCVYIAPLKALVKERMDDWSKKLGGKLGKKL------ 1256 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 TGD +++ + DI+ITTPE + S + R+ +R V ++IDE+H Sbjct: 1257 -----VEMTGDIAPDQKAIV---SADIIITTPEKWDGISRSWQTRKYVRDVRLIVIDEIH 1308 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G RG L + R + + + + +GLS + +A D+A +LG P Sbjct: 1309 ML-GEDRGPVLESIVTRTNFISAQTKANLRIVGLSTALANARDLADWLGIKNFGLYNFKP 1367 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 ++R +RI V G + R + I E + I+F Sbjct: 1368 SVRPVPMRIHV------------QGFPGKHYCPRMALMNKPAYQAI-QEHSPTKPVIIFV 1414 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSN----RVQSSDVFIARSH 355 +SR L L A I + H ++ + F H Sbjct: 1415 SSRRQTRLTALSLISLLAGNENPKAWINYELIHELELDALIDRVKDVNLRHTLEFGIGMH 1474 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLS 405 H + + R I E + +++ ++AT++L G+++ A ++++ + Sbjct: 1475 HAGLVESDRRIVENLFRDRKIQLLIATATLAWGVNLPAHMVIVKGTEHFDGKQGKFVDVG 1534 Query: 406 VASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-----LTPPHN 459 + LQ +GRAG Q + F + I E +E+ L N Sbjct: 1535 ITDVLQMVGRAGRPQYDNEAVACVFIHDIKKNYYKKFIYEPF---PVESNLLGVLPDHLN 1591 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF 519 V AM+ L ++ R+ + L +A + LS Sbjct: 1592 AEIVAGTVKSKQDAMNYLTWTYFFRRLLMNPNYYQLDTLEGEAINEFLSELVEKTIGELE 1651 Query: 520 RPKLV-WNRETGIL---TARPGAQLLAVTSGGT-----------IPDRGMYSVLLPEGEE 564 R +V + E L ++ T + + VL E Sbjct: 1652 RSGVVEVDEEDNNLLFASSLGRLASYYYLRHETARHFSTKFNKNMTSEDLLQVLTEATEF 1711 Query: 565 KAGSRR 570 R Sbjct: 1712 SELPVR 1717 >UniRef50_Q5CRF5 U5snrp Brr2 SFII RNA helicase (Sec63 and the second part of the RNA) n=2 Tax=Cryptosporidium RepID=Q5CRF5_CRYPV Length = 1204 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 111/599 (18%), Positives = 204/599 (34%), Gaps = 92/599 (15%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS--EHALVIAPTGSGKTLAAFLYA 65 LP+ R + +Q + + A + E+ LV APTGSGKT A L Sbjct: 508 IEELPEWSRECFR---CVSVSYLNEIQSRVFETAFKDFEENLLVCAPTGSGKTNIAMLCI 564 Query: 66 LDRLFR--EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L+ + + E + + +I+Y+SP+KAL ++ +L+I L+ Sbjct: 565 LNIISQFIEPQNNGKFTLDTSKFKIVYVSPMKALVSEQVESLRIRLR------------P 612 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHA 183 + + V TGDT + + ITTPE ++ ++ +I DEVH Sbjct: 613 LGILVNEMTGDTRIS---RSLMEMTQVFITTPEKFDVVTRKSTDGLSEKLKLIIFDEVHM 669 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRH 243 + S RG+ L + R + + +GLSAT+ + DVA FL + + + Sbjct: 670 LHDS-RGSVLEGIVARFK---KSFTRLVGLSATLPNFIDVAEFLNVNPKRGLYHFGPEFR 725 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 P + G + + + ++ ++ + +VF +SR Sbjct: 726 PV-----------PLLQTFIGIKAKKGFKKLQLMNSLVYDTVIKDIT-NHQILVFVHSRK 773 Query: 304 LAEKLTARLNELYAARLQRSPSIA-----VDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 + + + + + + SN ++ HH Sbjct: 774 DTIHTAKYIRDTATENGMLNLFFSGNNNVSREIILDEVNNIKSNNLKEILPCGIGIHHAG 833 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVAS 408 + + R + E G ++ +V T++L G+++ A ++I+ T LS Sbjct: 834 LVRSDRKVVEDLFSDGHIKVLVTTATLAWGVNLPAHTVIIKGTQIYQPERGEWTELSPLD 893 Query: 409 GLQRIGRAGH-QVGGVSKGLFFP-----RTRRDLVDSAVIVECMFAGRLENLTPPHNPLD 462 LQ IGR G Q G+ L++ + +E + L N Sbjct: 894 MLQMIGRGGRPQYDNNGHGVVITDFDHLTYYLSLLNQQLNIESQL---IPKLPDLINAEI 950 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF---------------------- 500 L A+D ++ Y R+ R L Sbjct: 951 SLGNVQNKRDALDWIKKTFLYIRIIRNPSLYGLDIDEIIDKSRQDKDLVAENKDALEEER 1010 Query: 501 -----DATLDMLSGRYPSGDFSAFRPKLV-WNRETGILTARPGAQL--LAVTSGGTIPD 551 +A L + KL+ +N + G + + ++ S TI D Sbjct: 1011 DLAFKNAVESYLIKLVETALDRLETCKLIQYNHKDGHVGSLMLGRISSHFYLSPETIQD 1069 >UniRef50_B0CYQ0 Predicted protein n=2 Tax=Agaricales RepID=B0CYQ0_LACBS Length = 1451 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 125/657 (19%), Positives = 231/657 (35%), Gaps = 90/657 (13%) Query: 2 ADNPDPSSLLPDVFSPA-----TRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGS 55 P P L+ + P + +Q + A +S E+ LV APTG+ Sbjct: 89 PARPVPPRLM-ERLVPIAELDDLARGCFPGYSTLNRIQSIIYPTAYKSNENLLVCAPTGA 147 Query: 56 GKTLAAFLYALDRLFRE-----GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLK 110 GKT A L L L++ R+ +R + +I+Y++P+KAL +++ R L LK Sbjct: 148 GKTDVAMLTILRVLYQHQIIAHPSSQIRDTIRRDSFKIIYVAPMKALASEIVRKLGKRLK 207 Query: 111 GIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARE 168 ++ + V TGD + +K I++TTPE ++ E Sbjct: 208 WLS------------IEVRELTGDM---QMTKSEIAQTQIIVTTPEKWDVVTRKPTGEGE 252 Query: 169 TLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAA 225 ++ +I+DEVH + +RGA + + R + +S + +GLSAT+ + DVA Sbjct: 253 LASSIKLLIVDEVHLLNE-ERGAVIETIVARTLRQVESSQSMIRIVGLSATLPNYVDVAD 311 Query: 226 FLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI 285 FL R + + P +P+ G+ A ++ + Sbjct: 312 FLCVSRQKGLFYFDSSFRP-----IPLEQ-----HFLGIKGKPGSALSRKNLDSVTFQKV 361 Query: 286 LDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH----FESTSGATS 341 + V + +VF ++R K L E + + + Sbjct: 362 SELVAQGHQVMVFVHARKETVKTAMGLRETSLFEGNAEDFSCEEHPQWNFFRRDIGESRN 421 Query: 342 NRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA 401 ++ HH + + R + E+ + ++ + T++L G+++ A I Sbjct: 422 REMKQLFDSGFGIHHAGMLRSDRNMMERMFDARAIKVLCCTATLAWGVNLPAHAGNITGT 481 Query: 402 ----------TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR------DLVDSAVIVEC 445 LSV LQ GRAG S + T D V S + +E Sbjct: 482 QVYDSSRGTFVDLSVLDVLQVFGRAGRPGLETSGEGYICTTEDKLPHYLDAVTSQLPIES 541 Query: 446 MFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLD 505 F G + N L A+ L + R+R+ + R + Sbjct: 542 QFKG---GMVDALNAEISLGTVANTRDAVQWLGYTYLFVRMRKNPFIYGISRESTGDDPN 598 Query: 506 MLSGRYPSGDFSAFR----PKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPE 561 + S R +A + ++++R +G T ++ A + Sbjct: 599 LGSKRNELITEAAKKLADARMILFDRPSGGFTISDLGRIAA------------------K 640 Query: 562 GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLP 618 + S + +E + DI+ + S +QI + + R+P Sbjct: 641 YYIRHTSIEIF--NENFRPKMSEADILAMLCRSTEFEQIQVRETEIKELEMLMGRIP 695 Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats. Identities = 80/561 (14%), Positives = 152/561 (27%), Gaps = 123/561 (21%) Query: 1 MADNPDPSSLLPDVF-------SPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAP 52 M D P S L + + + +Q Q + + + ++ H+L+ AP Sbjct: 942 MPDPPQCHSSLITLPFLPISVCHNSVVEALSGRLDTLNNIQTQCFWLLSNTKLHSLLCAP 1001 Query: 53 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGI 112 G GK+ L E + L ++P ++ T+ L+ Sbjct: 1002 AGGGKSALVQLAI------WYASGYPEQSQAHGGCTLIVTPQSSVATETVTELK------ 1049 Query: 113 ADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR- 171 V V E++ + P I + T S +L+ R Sbjct: 1050 ------LVSQAVGCTVE-----YSVDEKTLVQPKTPTIRVAT--SAHLLRLLSGRNPFTP 1096 Query: 172 --GVETVI------IDEVHAVAGSKRGAHLALSLERLDALLHTSA-QRIGLSATVRSASD 222 ++ VI +D A L + L ++ + +G+S ++ D Sbjct: 1097 IPWLDLVICENLEQLD-----------ATYELGISLLRFATQSAPTRFVGVSQSINDPVD 1145 Query: 223 VAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 282 +A ++ D I P +S A A ++ Sbjct: 1146 LADWISVD------------PIAICSFRPRDRDQSLSFSAQTFTIPHSASLFKAMAKPAH 1193 Query: 283 TGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS----PSIAVDAAHFESTSG 338 + I V S I+F SRG + + L + + + P+ D + Sbjct: 1194 SAI-RSVPLEESAIIFVPSRGQSRTIALELITQCSLETETARGYLPNDVADEFLQSYCAR 1252 Query: 339 ATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVD--- 395 + HG + + R I + G LR ++ + V Sbjct: 1253 LQDTTLIDFISKGVGFFHGGIKRGDRNIMLELYAEGILRVLI----------VPRVSCWS 1302 Query: 396 -------LVIQVA--------------TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTR- 433 +V+ S+ ++ RA G F + Sbjct: 1303 LPLRAAVVVVMGTQYTHVEPGDNSRQIQDYSITELVRMQSRAVRHKG-TGHFHLFCQAEA 1361 Query: 434 --------RD--LVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWY 483 D ++S + + + P QQ D L Sbjct: 1362 LDTLMRFLNDGVPLESQLQDSPVLESWCKTQRV-VAPDIASKQQL-----TDILSFTFLS 1415 Query: 484 SRVRRAAPWKDLPRRVFDATL 504 R+ + D +L Sbjct: 1416 RRIASNPSYYGFSNTKRDESL 1436 >UniRef50_D1ITI2 Whole genome shotgun sequence of line PN40024, scaffold_102.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1ITI2_VITVI Length = 1405 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 117/590 (19%), Positives = 206/590 (34%), Gaps = 91/590 (15%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYAL 66 S +PD PA + Q VQ + + +E+ L+ APTG+GKT A L L Sbjct: 337 ISAMPDWAQPAF-----KGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKTNVAMLTIL 391 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 ++ D H +I+Y++P+KAL +V NL L+ ++ Sbjct: 392 QQIALNRNADGSFNHSN--YKIVYVAPMKALVAEVVGNLSNRLQH------------YDV 437 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETVIIDEVHAVA 185 +V +GD ++ I++TTPE ++ S R + V+ +I+DE+H + Sbjct: 438 KVKELSGDQSL---TRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLH 494 Query: 186 GSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + RG L + R + T + +GLSAT+ + DVA FL D + + Sbjct: 495 DN-RGPVLESIVARTVRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSY 553 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P ++ G R + ++ V ++F +SR Sbjct: 554 RP-----------CPLAQQYIGITVKKPLQRFQLMNDVCYEKVMA-VAGKHQVLIFVHSR 601 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 K L+ T +N ++ + HH +++ Sbjct: 602 KETAKTAQILHSH--------------------TELVKNNDLKDLLPYGFAIHHAGMARA 641 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH-QVG 421 R + E+ G ++ ++ E G T LS +Q +GRAG Q Sbjct: 642 DRQLVEELFADGHVQVLIYNP--EKG-----------AWTELSPLDVMQMLGRAGRPQYD 688 Query: 422 GVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA 476 +G+ L++ + +E F + L N VL A A Sbjct: 689 SYGEGIIITGHSELQYYLSLMNQQLPIESQF---VSKLADQLNAEIVLGTVQNAREACSW 745 Query: 477 LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR----YPSGDFSAFRPKLVWNRETGIL 532 + Y R+ R L + + R + + + ++R++G Sbjct: 746 IGYTYLYVRMLRNPTLYGLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYF 805 Query: 533 TARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVY 580 ++ + GTI Y+ L R+ L EE Y Sbjct: 806 QVTDLGRIASYYYITHGTI---STYNEHLKPTMGDIELCRLFSLSEEFKY 852 Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 60/182 (32%), Gaps = 14/182 (7%) Query: 218 RSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSI 277 +A D+ ++G PP +R + I + G + R ++ Sbjct: 1036 ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHI------------QGVDIANFEARMQAM 1083 Query: 278 WPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSP--SIAVDAAHFES 335 T I+ + IVF +R L +A +P + Sbjct: 1084 TKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSPEELEPF 1143 Query: 336 TSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVD 395 ++++ H ++ + + Q ++G ++ V +SSL G+ + A Sbjct: 1144 VGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHL 1203 Query: 396 LV 397 +V Sbjct: 1204 VV 1205 >UniRef50_B6DMK2 Meiotic crossover 1 n=3 Tax=Oryza sativa RepID=B6DMK2_ORYSJ Length = 1205 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 111/555 (20%), Positives = 205/555 (36%), Gaps = 66/555 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFRE 72 P R F F+ ++Q + + S+ + ++ APTGSGKT+ L L L R Sbjct: 18 DLPPPFRSVF--GFRYFNSLQSECFPACFLSDVNMVISAPTGSGKTVLFELCILRLLSRF 75 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 + R + T + +YI+P+KAL + R+ + L + + T Sbjct: 76 LSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSL------------GISCLEMT 123 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE----TLRGVETVIIDEVHAVAGSK 188 GD + + D+++TTPE + R+ + V+IDEVH + Sbjct: 124 GDNEFYNTKSI--HDADLILTTPEKFDSVSRHGIRDGGLGFFSDIALVLIDEVHLLNDP- 180 Query: 189 RGAHLALSLERLDALLH---------TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 RGA L + R+ L + + I +SAT+ + D+A +L P Sbjct: 181 RGAALEAIVSRIKMLSRLGTMKIAPLANVRFIAVSATIPNIEDIAEWLAV--------PS 232 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 + PV V A + R S IL + R +S +VF Sbjct: 233 EGIKRFGEEMRPVKLTTKVFGYAPARNDFLFERRLQSF----IFDILMQHSRGKSALVFC 288 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAA---HFESTSGATSNRVQSSDVFIARSHH 356 ++R A++ L++ ++ +P + E+ + ++Q+ V H+ Sbjct: 289 STRKGAQEAAQCLSQTASSLGYSNPFMKSMQQYEHLKEAALTCSDKQLQACLVHGVGYHN 348 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSV 406 G + + R++ E G+++ + T++L GI++ A +VI+ Sbjct: 349 GGLCLKDRSVVEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGLYVEYER 408 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRTR------RDLVDSAVIVECMFAGRLENLTPPHNP 460 + LQ GRAG + + R +L++ +VE L N Sbjct: 409 SMVLQMCGRAGRPPFDDTGTIIIMTRRETVHLYENLLNGCEMVESQL---LPCAVEHLNA 465 Query: 461 LDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFR 520 V + A++ L+ Y R+++ + + + L+ Sbjct: 466 EIVQLTVSDITLAIEWLKCSYLYIRIKKNPQHYGIKKEIPRELLEKQMKDICVEKIHELG 525 Query: 521 PK-LVWNRETGILTA 534 L+W E G L Sbjct: 526 EYGLIWTDEDGFLLK 540 >UniRef50_A8NUR3 Type III restriction enzyme, res subunit family protein n=2 Tax=Brugia malayi RepID=A8NUR3_BRUMA Length = 2020 Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 111/569 (19%), Positives = 202/569 (35%), Gaps = 67/569 (11%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR 71 + F + F+ F++ +Q + A +S E+ L+ APTG+GKT A L L+ + Sbjct: 302 EDFDELGKKCFI-GFEKLNVIQSLVFTQAYKSQENLLICAPTGAGKTNIALLAILNTIHA 360 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 + +I+YI+P+KAL T++ N L +NL V Sbjct: 361 YMDNG---VIHKNDFKIVYIAPMKALATEMTMNFAKRLA------------PLNLHVREL 405 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG-VETVIIDEVHAVAGSKRG 190 TGDT + +L+ TPE ++ L V +IIDE+H + RG Sbjct: 406 TGDTTLSRKQ---IAETQMLVLTPEKWDVVTRKAIDLPLSKMVRLLIIDEIHLLHDD-RG 461 Query: 191 AHLALSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 + + R + + IGLSAT+ + DVA FL + + P Sbjct: 462 PVIETIVARTLRQVEMSQQCVRIIGLSATLPNYIDVARFLRVNPHKGMFFFDGRFRP--- 518 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 VP++ G D + + V + +VF +R K Sbjct: 519 --VPLSQTFIGVRNPRNMGPDI----MREMDEVCYDKVHQFVSKGHQVLVFVTARNATTK 572 Query: 308 LTARLNELYAARLQRSPSIAVDAAH------FESTSGATSNRVQSSDVFIARSHHGSVSK 361 L + A R + S + + +S + + HH + + Sbjct: 573 LATTFRDEAAKRGELSHFLPTNNGSVQYINAMKSIQNYRNGMLAEFFRLGFGIHHAGLPR 632 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQ 411 +R +TE+ +G + + TS+L GI++ A +VI+ + + V Q Sbjct: 633 RERLMTEKFFANGHITVLFCTSTLAWGINLPAHAVVIRGTEIFNVQKGGFSDIGVLDVQQ 692 Query: 412 RIGRAGHQVGGVSKGLFFPRTRRDLVD------SAVIVECMFAGRLENLTPPHNPLDVLA 465 GRAG S ++ ++ +E F R+ N L Sbjct: 693 IFGRAGRPQYESSGHGVIITWKKSMLQYLNMLLRQAPIESQFMSRI---YDNLNAEISLG 749 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFD---ATLDMLSGRYPSGDFSAFRPK 522 + A++ L+ ++ R + +PR + + L+ + + Sbjct: 750 TVSSIPEAVEWLKYTYFFIRAKLNPLAYGIPRSQLEHDPDLYEYLTQMMTEAAEKLDKNQ 809 Query: 523 LVWNRETGILTARPGAQLL--AVTSGGTI 549 ++ N G + + ++ TI Sbjct: 810 MIRN---GYVASTDLGRIASNYYMKYETI 835 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 113/548 (20%), Positives = 200/548 (36%), Gaps = 64/548 (11%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F+ VQ Q ++ ++ +AL+ APTGSGKTL A L R+FRE Sbjct: 1172 FEFFNPVQTQVFYCLYNTDQNALIGAPTGSGKTLCAELAM-YRIFREY----------PA 1220 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 + +YI+P+KAL + + + ++N+R TGD RS Sbjct: 1221 KKCVYIAPLKALVRERVSDWDDKFR------------KLNIRTVELTGDHSPDIRS---L 1265 Query: 146 NPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 + I+ITTPE + S R+ ++ V VI+DE+H + G +RGA L + RL + Sbjct: 1266 SSAKIVITTPEKWDGITRSWEIRQYVKDVALVIVDEIHLL-GVERGAVLEAIITRLKLMA 1324 Query: 205 HT-----SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVS 259 + +GLS + +A DVA +LG D P +R I + + Sbjct: 1325 RKEGSRNPVRVVGLSTALANAGDVAEWLGVDDAGLFNFRPNVRPVPIEVHI--------- 1375 Query: 260 SVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAAR 319 +G + R + I + ++F SR Sbjct: 1376 ---AGFPGQHYCPRMALMNRPAFKAI-KSYSPCKPALIFVASRRQTRLTAMSFVSQLVTD 1431 Query: 320 LQRSPSIAVDAAHFESTSGA-TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRC 378 + +D E ++ + F HH + + +R+I E+ +++ Sbjct: 1432 DDPRQWLHMDMEELEQLITTLKDENLKLTLPFGVGMHHAGLQQHERSIVERLFVQKKIQV 1491 Query: 379 VVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIGRAGH-QVGGVSKGL 427 +VAT++L GI+M A +V++ V LQ IGRAG Q + + Sbjct: 1492 MVATATLAWGINMPAHLVVVKGTEYYDGKTHKYIDFPVTDVLQMIGRAGRPQFDDSAVAV 1551 Query: 428 FFPRTRRDLVDSAVIVECM--FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSR 485 + + + + E + L L N M+ + Y R Sbjct: 1552 IYVQDIKKNFYKRFLYEPFPVESSLLMALPNHVNAEIYAGTIASEQHVMEYIANTYLYRR 1611 Query: 486 VRRAAPWKDLPRRVFDATLDMLSGRYPS-GDFSAFRPKLVWNRETGILTARPGAQL--LA 542 + + + +A L + + ++ N + L + P + + Sbjct: 1612 LFANPSYYGIVDTTPEALTQFLVEVVDNCIEELVLSNCIIINEDEQSLISAPLGAIASVY 1671 Query: 543 VTSGGTIP 550 + T+ Sbjct: 1672 YLNHKTVR 1679 >UniRef50_Q9VF56 CG5205 n=16 Tax=Coelomata RepID=Q9VF56_DROME Length = 2183 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 112/542 (20%), Positives = 198/542 (36%), Gaps = 65/542 (11%) Query: 2 ADNPDPSSL-----LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGS 55 A P P S+ + R F K+ +Q + VA S E+ LV APTG+ Sbjct: 455 ASEPPPLSVGNKRVQIEELDDVGRLAFANC-KELNRIQSVVFPVAYHSNENMLVCAPTGA 513 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKT A L + + + R +I+YI+P+KAL ++ N LK + Sbjct: 514 GKTNVAMLSIVHTIRCHLEQG---VINRDEFKIVYIAPMKALAAEMVDNFSKRLKSLQ-- 568 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGV 173 + V TGD + +K IL+TTPE ++ + + + V Sbjct: 569 ----------IAVRELTGDI---QLTKAEMAATQILVTTPEKWDVVTRKGSGDVALISLV 615 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGD 230 E +IIDEVH + G +RG + + R L+ +S + +GLSAT+ + DVA FL + Sbjct: 616 ELLIIDEVHLLHG-ERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVN 674 Query: 231 RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL 290 + + P + + G + + ++ V Sbjct: 675 PMKGLFYFDSRFRPV-----------PLDTNFVGIKSVKQLQQIADMDQCCYQKCVEMVQ 723 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAH----FESTSGATSNRVQS 346 +VF ++R + + EL + + D+A S + + ++ Sbjct: 724 EGHQIMVFVHARNATVRTANVIRELAQQNNTSALFLPKDSAAHGLATRSIQRSRNKQLVE 783 Query: 347 SDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----- 401 HH + + R + E+ G + +V T++L G+++ A ++I+ Sbjct: 784 LFSCGLAMHHAGMLRADRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGTDIYDA 843 Query: 402 -----TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGR 450 L + LQ GRAG Q G + L+ + +E F Sbjct: 844 KHGSFVDLGILDVLQIFGRAGRPQFDKSGVGTIITSYDKLNHYLSLLTNQFPIESNF--- 900 Query: 451 LENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR 510 + L N L T A++ L + R+R + + + + R Sbjct: 901 VNCLADNLNAEIGLGTITNVDEAIEWLSYTYLFVRMRINPHVYGIEYSELEKDPTLEARR 960 Query: 511 YP 512 Sbjct: 961 RA 962 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 107/576 (18%), Positives = 212/576 (36%), Gaps = 73/576 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTL 59 + P P S L +V + F +Q Q +H +++ L+ APTGSGKT+ Sbjct: 1313 LPLRPLPVSCLKNVVYESL-----YKFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTI 1367 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 A + L ++ +++YI+P+KAL + + + + Sbjct: 1368 VAEIAIFRAL-----------NQNPKCKVVYIAPLKALVKERIADWEQRFQ--------- 1407 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVII 178 + + L+V TGD +++TTPE + S + RE ++ V ++I Sbjct: 1408 -RSSLGLKVVELTGDVTPD---IQAIRESQLIVTTPEKWDGISRSWQTREYVQHVSLIVI 1463 Query: 179 DEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 DE+H + G RG + + + R + + + + +GLS + +A D+A +LG ++ Sbjct: 1464 DEIHLL-GEDRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGINKMGLY 1522 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 P++R +++ + +G + R ++ I T Sbjct: 1523 NFKPSVRPVPLQVHI------------NGFPGKHYCPRMATMNRPTFQAI-RTYSPCEPT 1569 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNR-VQSSDVFIARS 354 IVF +SR L A + + E + ++ F Sbjct: 1570 IVFVSSRRQTRLTALDLITFVAGESNPKQFLHIPEDEIELILQNIREQNLKFCLAFGIGL 1629 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPL 404 HH + ++ R E+ + +++ +VAT++L G+++ A +VI+ + Sbjct: 1630 HHAGLQEQDRKCVEELFLNRKIQILVATATLAWGVNLPAHLVVIKGTEYFDGKVKKYVDM 1689 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPRTRRD------LVDSAVIVECMFAGRLENLTPP 457 + LQ +GRAG Q + + L D + + E++ Sbjct: 1690 PITDVLQMMGRAGRPQFDNEGVAVVLVHDEKKNFYKKFLYDPFPVESSLLGVLPEHI--- 1746 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFS 517 N V AA+D L ++ R+ R + L + + +S + Sbjct: 1747 -NAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQDIEPENVNNFMSNLVERVVYE 1805 Query: 518 AFRPKLVWNRETGILTARPGAQL--LAVTSGGTIPD 551 + R+ G L ++ S T+ Sbjct: 1806 LSAAACLVERD-GCLIPTFLGRISSYYYLSYRTMKH 1840 >UniRef50_A7F217 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7F217_SCLS1 Length = 1689 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 113/550 (20%), Positives = 195/550 (35%), Gaps = 57/550 (10%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDR 68 LPD F ++ AVQ + + ++ + +V APTGSGKT L Sbjct: 340 ELPDRFRQVF------PYELFNAVQSKCFAPIYKTSNNIVVSAPTGSGKTALMELAICKL 393 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + G +I+Y +PIK+L ++ ++ + NL V Sbjct: 394 VESHGSG---------QFKIVYQAPIKSLCSERMKDWTKKFSHL------------NLPV 432 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVA 185 TGDT E S++ I+ITTPE + T + + L+ V+ +IDEVH + Sbjct: 433 AELTGDTSNAEMSRV--GSASIIITTPEKWDSI-TRKWTDYQKLLQLVKLFLIDEVHILK 489 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 + RGA L + R+ ++ + + + LSATV ++ D+A +LG R + PA R Sbjct: 490 DA-RGATLEAVVSRMHSI-GANVRFVALSATVPNSHDIATWLG--RDSSSRQLPAHRETF 545 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V S + + I ++ + + +VF +R Sbjct: 546 GEEFRPVKLQKHVHGYESRANDFAFEK----ILDGKIPALIQKYSCKKPIMVFCFTRKSC 601 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E A L E + + + + +Q HH + + R+ Sbjct: 602 EGTAAILAEYWTRQRNVDRAWPAPTNRT----VVGNKDLQELVGCGVAYHHAGLDSQDRS 657 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLSVASGLQRIGRAG 417 E A G++ + TS+L +G+++ +V++ S +Q +GRAG Sbjct: 658 AIETAYLKGDISVICCTSTLAVGVNLPCQLVVLKGTVCFQDSGLVEYSDLEVMQMLGRAG 717 Query: 418 H-QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAM 474 Q + + R D + + + L NL N L A A Sbjct: 718 RPQFDDSATAIIMTRMDNTDRYKKMISGQDVLESTLHLNLIEHLNSEIGLRTIKTAYEAK 777 Query: 475 DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 L R+R+ + D D + + +E Sbjct: 778 VWLGGTFLSVRMRQNPNYYKFSGVAPSRDADQQLELVCERDIKLLQDYELVTKEDFFSCT 837 Query: 535 RPGAQLLAVT 544 GA + Sbjct: 838 EYGAAMSRYM 847 >UniRef50_Q7RHC8 Drosophila melanogaster CG5931 gene product-related (Fragment) n=3 Tax=Plasmodium (Vinckeia) RepID=Q7RHC8_PLAYO Length = 1136 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 105/548 (19%), Positives = 198/548 (36%), Gaps = 73/548 (13%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYALD 67 +P+ +F K A+Q + + +A E+ L+ APTGSGKT A L L+ Sbjct: 599 EIPEWARE---TFFCVNIKNLNAIQSKVYDIAFNQFDENLLICAPTGSGKTNIALLCMLN 655 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 + ++ + +I+YISP+KAL + ++ + LK + NL+ Sbjct: 656 VI--NSYRLFSGEIEKNSFKIIYISPMKALVNEQVQSFGLRLKAL------------NLK 701 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVA 185 V TGD + + I++ TPE ++ + + E L ++ +I DE+H + Sbjct: 702 VCELTGDVHLSSKE---IDANQIIVMTPEKFEVI-SRKWNEKIMLEKIKLIIFDEIHLLN 757 Query: 186 GSKRGAHLALSLERLDALL-----------------HTSAQRIGLSATVRSASDVAAFLG 228 RG L + R++ + +GLSAT+ + DV FL Sbjct: 758 EP-RGHVLESIITRINRYADNSAVGKGMDSNNATDKRNGIRLVGLSATLPNYEDVGIFLR 816 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDE 288 + + P + G E + + +L+E Sbjct: 817 ANPKKGIFYFDQSFRPV-----------QLDQYYIGLKEKKGIKKYNLMNEIAYEKVLEE 865 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRV 344 ++ ++F +SR + L + + + + E + + Sbjct: 866 AGKN-QILIFVHSRKETYRTAKILIDKFVKNDNINLFLMDKKISVEILLSEKEAIVNEEL 924 Query: 345 QSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT-- 402 + HH + + R + E L+ +V TS+L G+++ A ++I+ + Sbjct: 925 KELLPLGFGIHHAGLKRTDRKLVEDLFADKHLQVLVCTSTLAWGVNLPAHTVIIKGTSIY 984 Query: 403 --------PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-DLVDSAVIVECMFAGRL- 451 LS LQ IGRAG Q K + + L S + +L Sbjct: 985 NMNIGDFDELSFMDVLQMIGRAGRPQFDKSGKAIIITEHKNLQLYLSLNNEQMYIESKLM 1044 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 EN+ N VL A++ + Y R+ + + + + + + R Sbjct: 1045 ENIINIINAEIVLKNIQDFRDAINWFKETYMYIRMLKNTNYYGIENSK-NRIIKNVQNRI 1103 Query: 512 PSGDFSAF 519 +S+F Sbjct: 1104 NDIIYSSF 1111 >UniRef50_D2A5P4 Putative uncharacterized protein GLEAN_15573 n=2 Tax=Tribolium castaneum RepID=D2A5P4_TRICA Length = 1428 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 108/564 (19%), Positives = 195/564 (34%), Gaps = 67/564 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFRE 72 P R F K+ +Q + + VA + E+ L+ APTG+GKT A L + ++ Sbjct: 397 SLDPTGRLVFKD-IKEFNRIQSEVFPVAYNTNENMLICAPTGAGKTNIALLAIVHQIKAH 455 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 ++ +I+Y+ P+KAL T++ N L V + V T Sbjct: 456 ---MEGGLIRKDDFKIVYVCPMKALATEMVSNFSKKLA------------PVGIVVKELT 500 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRG 190 GD ++ +L+TTPE ++ A E V+ +I+DEVH + S RG Sbjct: 501 GDMQLTKKE---IAETQMLVTTPEKWDVISRKGAVDTEVTSLVKLLILDEVHLLN-SDRG 556 Query: 191 AHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 + + R + +S + + LSAT+ DVA FL + + Sbjct: 557 PVIEALVARTLRQVLSSQSIIRIVALSATLPGYLDVANFLKVNPNTGLFFFDNRFR---- 612 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + + + ++ I+ + + +VF SR L Sbjct: 613 ----------SVPLTMTFIGVKNKNDQDAMDLICYNKIIPIIKDGQQVMVFVTSRNLTAV 662 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L + I S+ ++ HH + + R Sbjct: 663 VAKNLLTHAKNNNVLANFIPDKKH--RIGKNFKSSELELLVPNGFGVHHAGMCRSDRLEV 720 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIGRAG 417 E + G L+ +V T++L G+++ A ++I+ + + Q GRAG Sbjct: 721 ESLFRVGALKVIVCTTTLAWGVNLPAHAVIIRGTTRYDAQKSSYVDMDMLDIQQIFGRAG 780 Query: 418 H-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 Q G+ + L+ S +E F L N+ N VL + Sbjct: 781 RPQYDTSGHGMIITSVQNMANYMSLLTSQAPIESQF---LNNVPDHLNAEIVLGTVSNLK 837 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVF---DATLDMLSGR-YPSGDFSAFRPKLVWNR 527 AM+ L Y R+++ L + L + + + + +N Sbjct: 838 EAMEWLTNTFVYCRIKKNPLVYGLTFTEIWEPEKLFQYLERKLFDAASTLESAQMVRFNP 897 Query: 528 ETGILTARPGAQL--LAVTSGGTI 549 G L ++ S T+ Sbjct: 898 TLGELRPTNYGRIASFYYISHQTM 921 Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 29/179 (16%) Query: 27 FKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKT 85 F AVQ Q +H ++ + L+ APTGSGKT+ + + L R Sbjct: 1250 FTHFNAVQSQVFHCCFNTDSNVLLGAPTGSGKTIVSEICILRLFAN-----------RPE 1298 Query: 86 SRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTR 145 +++YI+P+KAL + + I +V TGD Sbjct: 1299 RKVVYIAPMKALVRERVLDWTPKFAKI------------GKKVVEVTGDVTPH---SSLI 1343 Query: 146 NPPDILITTPESLYLM-LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDAL 203 + I+ITTPE M ++ ++ V +IIDE+H +A RG L + + R++ + Sbjct: 1344 STSHIIITTPEKWDGMSRNWLQKDFVKQVGLIIIDEIHLLAED-RGPVLEVIVSRMNYI 1401 >UniRef50_C5RNG9 DEAD/DEAH box helicase domain protein n=2 Tax=Firmicutes RepID=C5RNG9_CLOCL Length = 722 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 164/803 (20%), Positives = 287/803 (35%), Gaps = 135/803 (16%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLF 70 + ++P +++ + + + VQ + + ++ H ++ + T SGKT AAF L L+ Sbjct: 7 ERYAPFIQEYIYQKNWTDLREVQVEACNEILDTDDHVIIASGTASGKTEAAFFPILTTLY 66 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 + ++YI P+KAL D L L+ + V Sbjct: 67 NQPSNSVG---------VMYIGPLKALINDQFERLSELLEESY------------IPVWP 105 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGS 187 GD + + + IL TPESL +L A+ + V+IDE+HA G+ Sbjct: 106 WHGDISQSIKKRALKEAKGILQITPESLEALLMRHPGDAKRLFSDLRFVVIDEIHAFMGT 165 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG + L RL+ + +RIGLSAT+ FL R Sbjct: 166 DRGLQVLCLLSRLEKITDCYPRRIGLSATLNDYEPAQHFLA----------SGTRRGVKV 215 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + + V S E + L + + ++FTNSRG AEK Sbjct: 216 VGIKRHARTISLCVESFQLPKEPLKAENIVKE--YNEFLYQNSHKKKCLIFTNSRGGAEK 273 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + L + AR + HHGS+S R Sbjct: 274 VITDLKNIAYARQETDVFF---------------------------VHHGSISAALRREA 306 Query: 368 EQALKSGE-LRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVG----- 421 E AL+ E AT +LELGID+G +D IQ+ P S +S +QR+GR+G + G Sbjct: 307 ETALRDAEGATVTAATLTLELGIDIGDLDSTIQIGAPYSCSSFVQRLGRSGRRTGKSQML 366 Query: 422 -----GVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTVAAAAM- 474 S F R +L+ + I++ +E P ++A QT++ Sbjct: 367 FVNIFEESDKNLFERLPWELLRAIAIIQLYLEERWVEPFYMKEKPFSLVAHQTLSVLMSY 426 Query: 475 DALQVDEWYSRVRRAAPWKD-LPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 L E V +++ + + + L + + Sbjct: 427 GELSPPELARNVLLLPAFRNSISQDEYREILQYMLEN------------------DYLQK 468 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSR--RVGELDEEMVYESRVNDIITLG 591 G ++ + + Y+V E S+ +G LD + + L Sbjct: 469 VENGGIIVGIKGERIVNHYSFYAVFQDEQVFHVHSQEGEIGTLDN----CPAIGEAFVLA 524 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT 651 WR+ ++ ++ I+ +++R+P W G G ++ I L ++ S Sbjct: 525 GNMWRVLELDENRKIIYVRSIKNSRIPIWNGSGGHIHTKVVHRIRRILTENVRYSYLSPN 584 Query: 652 IPPWLAEENTIANIQGLIEEQ-----RNATGIVP--------GSRHLVLERCRDEIGDWR 698 L E A G++E N+ + P + L+ +D + + Sbjct: 585 ASEVLEEARKTAKNSGMLENNVIPYSANSFYLCPWVGSKEMKTIKRLLSYGLKDFLQIYS 644 Query: 699 IILHSPYGRRVHEPWAVA-IAGRIHALWGADASVVASDDGIVA------RIPDTDGKLPD 751 + S Y ++ +V + ++H SV +D +V +I DG +PD Sbjct: 645 VSGGSHY-LQITSGLSVVEVVNKLHE-----LSVDCDNDNMVLTEKQAPKIDKYDGMVPD 698 Query: 752 AAIF------LFEPEKLLQIVRE 768 + E ++I+RE Sbjct: 699 NLLRKAFLHNELNVESAVKILRE 721 >UniRef50_A8Q2W8 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q2W8_MALGO Length = 832 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 112/578 (19%), Positives = 210/578 (36%), Gaps = 56/578 (9%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTL 59 M + + P R F +K +Q + +A ++ E+ LV APTG+GKT Sbjct: 222 MPFRSTERLVTTEEMDPLCRGAFRH-YKTLNRLQSAVYPMAYKTHENLLVCAPTGAGKTD 280 Query: 60 AAFLYALDRLFREGGEDTREAHKRKT--SRILYISPIKALGTDVQRNLQIPLKGIADERR 117 A L L + R R++ +I+Y++P+KAL +++ Q L + Sbjct: 281 VAMLSILQCISRYMHYSERDSIHVDKSAFKIVYVAPMKALVSEIVSKFQKRLAYL----- 335 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVET 175 L+V TGD + + +++TTPE ++ + V Sbjct: 336 -------GLQVRELTGDMQLTRKE---ISETQMIVTTPEKWDVVTRKPTGDGDLALSVRL 385 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRP 232 +IIDEVH + +RG+ + + R L+ ++ + +GLSAT+ + DVA FL +R Sbjct: 386 LIIDEVHLLHE-ERGSVIETIVARTQRLVESTQSMIRIVGLSATLPNFVDVADFLSVNRY 444 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + A PV V G+ A + +++ V Sbjct: 445 RGLFYFGAAFR-------PVPLEQHFIGV---RGKHGSAQSRTHLDRVAYEKVMELVREG 494 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA--VDAAHFESTSGATSNRVQSSDVF 350 +VF ++R K L EL S + + + + ++ Sbjct: 495 HPVMVFVHTRKDTVKTAQTLLELGKDDDLHSILVEGRDATRFERDVTSSRNRELRELFEH 554 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------- 401 HH + + R ++E+ +G R + T++L G+++ A ++I+ Sbjct: 555 GIGIHHAGMLRSDRDLSERLFAAGATRVLCCTATLAWGVNLPAYAVIIKGTDVYDAEQGK 614 Query: 402 -TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDL---VDSAVIVECMFAGRLENLTPP 457 L + LQ GRAG + + L +++ + + L L Sbjct: 615 MVDLGILDVLQIFGRAGRPQYEDVGVSYICTSSEKLPHYIEAITSAHPIESTFLRGLVDA 674 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYP----S 513 N L + + L ++R+R+A L +A ++ R + Sbjct: 675 LNAEIALGSVSSLDDGVSWLGFTYLFTRLRKAPLVYGLDAHDLEADPTLVQRRRHWISYA 734 Query: 514 GDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI 549 +V++ G L ++ S TI Sbjct: 735 ARVLVQHQMIVFDTSAGTLRPTNMGRIASRYYLSHKTI 772 >UniRef50_A4QWU8 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4QWU8_MAGGR Length = 1508 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 107/568 (18%), Positives = 214/568 (37%), Gaps = 63/568 (11%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 P +LPD F+ AVQ +++ ++ ++ +V APTGSGKT L Sbjct: 236 SPRDVLPDRLRVVF------PFELFNAVQSKSFASVYKTNDNVVVSAPTGSGKTAIFELA 289 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L + + +++Y++P KAL ++ R+ + + + Sbjct: 290 ICKLLSQNTDQ---------NFKVIYVAPTKALCSERARDWESKFRHL------------ 328 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVH 182 NL TGDT + + S++ I++TTPE L + R+ L V+ V+IDEVH Sbjct: 329 NLTSAELTGDTFSTDMSRV--RAAQIIVTTPEKLDSITRRWEDYRKLLDLVQLVLIDEVH 386 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + + RGA L + + R+ + ++ + + LSATV ++ DVA +LG R T + PA Sbjct: 387 FLKDT-RGATLEVLICRMKTQV-SNIRVVALSATVPNSEDVAKWLG--RGNTDNHQPARL 442 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 PV V + + + ++ + + IVF +R Sbjct: 443 ETFGEEFRPVRLQKHVYGLHCSGNAFQFEPQLDTKL----CEVITTHSQKKPIIVFCFTR 498 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 E +L++L+ + + + T++ +Q HH + ++ Sbjct: 499 KSCELTAKKLSQLWISMADDKKPWPGPGQNMK----VTNDGLQQVMQQGVAFHHAGLEQQ 554 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIG 414 R E+A G+L + TS+L +G+++ ++++ S +Q +G Sbjct: 555 DRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVILKGTMGFQDGKLLEYSDLEVVQMLG 614 Query: 415 RAGH-QVGGVSKGLFFPRTRRDL-VDSAVIVECMFAGRLEN-LTPPHNPLDVLAQQTVAA 471 RAG Q + + R+ ++ + L + L N L Sbjct: 615 RAGRPQFDNSAVAIILTRSETKARYEAMASGTQVLESTLHHNLIHHLNSEICLGTIRSLD 674 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY---PSGDFSAFRPKLVWNRE 528 +A + L+ R+ + + + + + + + + + Sbjct: 675 SAKEWLKSTFLGVRLHANPSHYKIDSQSPNGEKLHVGRSIDDMCEREINLLQEAKLIRFD 734 Query: 529 TGILTARPGAQ-----LLAVTSGGTIPD 551 +L + ++ + I D Sbjct: 735 NNVLECTTAGRSMSEYMIRFETMKMILD 762 >UniRef50_Q049S7 Lhr-like helicase n=12 Tax=Bacteria RepID=Q049S7_LACDB Length = 744 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 146/763 (19%), Positives = 259/763 (33%), Gaps = 117/763 (15%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 ++P +D+ + R ++ +Q V ++ + L+ A T SGKT AAF L L Sbjct: 6 RYAPFIQDYIYSRGWETLRPLQTAAAQVIFDTDDNLLLSASTASGKTEAAFFPILTDLAE 65 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 + LYI+P+KAL D L+ +G ++ V Sbjct: 66 NPADSIA---------CLYIAPLKALINDQYDRLKDICEG------------SDVPVWRY 104 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAGSK 188 GD A ++ K+ + P +L TPESL ++ ++ + + V+IDE+H+ S Sbjct: 105 HGDVSAAQKRKMFKRPQGVLQITPESLESLIINKHADIPRLFGDLRYVVIDELHSFLRSD 164 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGD-----RPVTVVNPPAMRH 243 RG LERL+ L +RIGLSAT+ FLG R V + P H Sbjct: 165 RGGQTFCLLERLNRLAGVKPRRIGLSATIGDPKAAGQFLGDGSGHQTRIPKVKSRPQRWH 224 Query: 244 PQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRG 303 + + S A + + + R + +VFTNSR Sbjct: 225 LSMEHFYKSGDQAGDHSALPAQAVLDQASDQAPELADPGLAYIFDHTRGKKCLVFTNSRE 284 Query: 304 LAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 E + L + + + HHG++S Sbjct: 285 ECEAVCQVLRQYCEYKHEPDRF---------------------------MIHHGNLSAAL 317 Query: 364 RAITEQALKSGELRCV-VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQV-- 420 R E +K + AT++LELGID+G ++ Q+ P +V+ LQR+GR G + Sbjct: 318 RQGAEAIMKDEDSNITTCATATLELGIDVGQLERAFQIEAPFTVSGFLQRMGRTGRRGNP 377 Query: 421 ----------GGVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTV 469 S+ + L+ +VE +E P +L QT+ Sbjct: 378 AEMWFVMREEQAESRAMLPVLLPWSLLQGIALVELYLQECWVEPPRDHQLPYSLLYHQTM 437 Query: 470 AAA-AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 + A + E SRV + ++ + + + L L + Sbjct: 438 STLMAGGEMSPAELASRVLTLSYFRWVSQDDYRVLLRHLI------------------KT 479 Query: 529 TGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYESRVND 586 I G ++ + + Y+V E A S +G + V + + Sbjct: 480 DQIQLTENGGLIVGLAGERVTNNFKFYAVFQENEEYSVHAESEELGTI----VKPPPLGE 535 Query: 587 IITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGE-GNGRPAELGEMIGDFLHLLADG 645 I + W +++I R + V ++P + G+ ++ + + L Sbjct: 536 KIAIAGHVWVVEEIDRRRRQVYV-HQVKGQIPAYFGDVAGDIHPKVLQQMRQILAEKRQY 594 Query: 646 AFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPY 705 + L+E +A G +P + + +G L Sbjct: 595 PYLMKNAAARLSETRAMAEAAG-----------LPDKQLI-------NLGAKTYCLFPWT 636 Query: 706 GRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGK 748 G + + + G I + ++G Sbjct: 637 GSYAFLALERFLRLKCASRLGLKNIDSVRPYYIQFSMDVSEGD 679 >UniRef50_B4SBA5 DEAD/DEAH box helicase domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SBA5_PELPB Length = 734 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 140/778 (17%), Positives = 271/778 (34%), Gaps = 121/778 (15%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 + + W + + + Q + ++ A T +GKT AAFL +L Sbjct: 14 LLDEKIQRWIWEQKWMTLRDAQERAIAPILAGNTDVIIAAATATGKTEAAFLPICSKLL- 72 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 A + + + +LYISP+KAL D ++ + +++ V Sbjct: 73 --------AKECQNASVLYISPLKALINDQFSRMEQLCE------------RLDIPVHPW 112 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR---ETLRGVETVIIDEVHAVAGSK 188 GD ++ K + P IL+ TPES+ + + + + ++IDE+H+ GS+ Sbjct: 113 HGDVSVSKKGKFLKKPTGILLITPESVEALFVNHGSAVPQIFNNLLYIVIDELHSFIGSE 172 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRI 248 RG L L R++ + RIGLSAT+ + FL + V + Q + Sbjct: 173 RGQQLQSLLHRIEFAIKRKIPRIGLSATIGDMHLASRFLRPETEAKTVIIVSNATGQ-EL 231 Query: 249 VVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKL 308 + + + + + E +GS E R +S ++F NSR E Sbjct: 232 QLLLRGYVNKAPLLHPIEETEEVPPDGSSLEIGEDLFKTL--RGKSNLIFPNSREQVENF 289 Query: 309 TARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITE 368 + L + + HHG+++K R E Sbjct: 290 SDLLRNKCEEQHLPNEFW---------------------------PHHGNLAKGLREEAE 322 Query: 369 QALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGL 427 A+K +V TS+LE+GID+G+V + Q+ P SVAS QR+GR+G + G + Sbjct: 323 AAIKDKSHPVNIVCTSTLEMGIDIGSVISIAQIGVPPSVASLRQRLGRSGRKDGDPAILR 382 Query: 428 FFPRT-------------RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 + + R +L+ + +V + E L + QQ ++ A Sbjct: 383 IYIQENEVTISSKPLACLRSNLIQTIAMVRLLLEKWYEPPPSGGLHLSTMVQQLLSLIAQ 442 Query: 475 -DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 + + Y+ + + ++++ +++F L L + I+ Sbjct: 443 YGGITAVQAYNLLCKNGAFQEIGQQMFVDLLRTLGNQRL------------------IMQ 484 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEEMVYESRVNDIITLG 591 A G L + Y+ E + G R +G L + E VN ++ G Sbjct: 485 ASDGLLLHGQLGERIVNHYSFYAAFTTPEEYRLLTGDRTLGTLPLDRPVE--VNSLLIFG 542 Query: 592 ATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGT 651 W + + + +++ P +LP + G+ ++ + + F Sbjct: 543 GRRWTVLDVDAQKKVISLKPATGKKLPQFDGQAGRVHDQIRKEMFAVYTEKGIPIFLDAQ 602 Query: 652 IPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHE 711 L E + L ++ +++ L G ++ + Sbjct: 603 AKELLGEAREAFDRLSL------------SNKKILI-------QGNETYLFCWMGDKILD 643 Query: 712 PWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREA 769 + + + A++ GI I + + E + A Sbjct: 644 TLVAMLRSK---------GLTANNYGIAIEISSVSPNKLQSCLRALLKEGVPDAYELA 692 >UniRef50_C4QEN2 Activating signal cointegrator 1 complex subunit 3, helc1, putative n=3 Tax=Fungi/Metazoa group RepID=C4QEN2_SCHMA Length = 2709 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 106/553 (19%), Positives = 203/553 (36%), Gaps = 60/553 (10%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + K+ +Q + +A + E+ L+ APTG+GKT A L + L +D Sbjct: 498 FQGMKELNLIQSVVYPLAYHTSENLLISAPTGAGKTNVALLTIVQLLRTYMKDDNVLDL- 556 Query: 83 RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSK 142 K +I+Y++P+KAL ++ L + + +RV TGD + SK Sbjct: 557 -KAFKIVYLAPMKALAAEMADTFSKRL------------SPLGVRVRECTGDM---QLSK 600 Query: 143 LTRNPPDILITTPESLYLMLTSR--ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERL 200 +L++TPE ++ ++ V+ +IIDEVH + +RGA + + R Sbjct: 601 QELLETQMLVSTPEKWDVISRKGTGDANLVKLVKLLIIDEVHLLHE-ERGAVIEALVART 659 Query: 201 DALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDD 257 + +S + +GLSAT+ + DVA FL + + + P Sbjct: 660 LRQVESSQTMIRLVGLSATLPNYIDVARFLCVNLQRGLFYFDSRFRPV-----------P 708 Query: 258 VSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYA 317 + G + ++ ++ +L++V + +VF +SRG + L Sbjct: 709 LGMSFIGIRGSNRKVQDLNMSTICYEKVLEQVKQGEQVMVFVHSRGDTFRTARALRTSAQ 768 Query: 318 ARLQ----RSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 R+ + + +T + ++ HH + + R++ E+ Sbjct: 769 QLDHMMYFRNNDSSTMKICLKKIQKSTDSTIKDLVPDGFACHHAGMLRVDRSLVEKLFAD 828 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQVATPL----------SVASGLQRIGRAGHQVGGV 423 G +R +V T++L G+++ A ++I+ + LQ GRAG Sbjct: 829 GHIRVLVCTATLAWGVNLPAHAVIIKGTRVYKAEKSDFVNLDILDVLQIFGRAGRPQFDT 888 Query: 424 SKGLFFPRTRRDLVDSAVIVECMFAGRLE-----NLTPPHNPLDVLAQQTVAAAAMDALQ 478 ++ L + G +E NL N L + A+ L Sbjct: 889 HGQATLITSQESLAHYLRFITNQ--GPIESNLLTNLHDHLNAEISLGTVSNIDEAVTWLS 946 Query: 479 VDEWYSRVRRAAPWKDLPRRVFD---ATLDMLSGRYPS-GDFSAFRPKLVWNRETGILTA 534 + R+RR L V + ++ L S + + TG L + Sbjct: 947 YTYLFIRLRRNPLNYGLTTAVLERDPDLVEFLGRVVRSCATDLDCAEMVRYEPATGQLAS 1006 Query: 535 RPGAQLLAVTSGG 547 + ++ Sbjct: 1007 TDRGRTASLFYIR 1019 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 119/616 (19%), Positives = 223/616 (36%), Gaps = 69/616 (11%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P + L +V + F +Q Q +H + L+ APTGSGKT+AA L Sbjct: 1340 PLPVTALKNVNYELLYE-----FPYFNPIQTQLFHTLYHQNVNVLLGAPTGSGKTVAAEL 1394 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 ++ + +YI+P+KAL + + I + + Sbjct: 1395 AIFRVF-----------NEYPKQKCVYIAPLKALVRERIEDWNIRI-----------GQK 1432 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + RV TGD + L D+++TTPE + S + R +R V +IIDE+H Sbjct: 1433 LKKRVVELTGDITPDIKQLLR---SDLIVTTPEKWDGISRSWQHRSYVRQVALIIIDEIH 1489 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + G +RG L + + R + + + + IGLS + +A D+AA+L +T + Sbjct: 1490 LL-GEERGPVLEVLVSRANYIANQIGQPIRIIGLSTALANAPDLAAWLHVPFTMTSIAEV 1548 Query: 240 AMRHPQ--------IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLR 291 A + P + G + R ++ I I + Sbjct: 1549 ASISGTSYGLTGRGLFNFRPSVRPVPLEVHIQGYPGRHYCPRMATMNRPIFQAI-NSHSP 1607 Query: 292 HRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST-SGATSNRVQSSDVF 350 ++ ++F +SR L AA + + ES ++ + F Sbjct: 1608 NKPVLIFVSSRRQTRLTALDLVSYVAASDNSKCWLHMKPEEMESICENIQETNLRLTLTF 1667 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV---------- 400 HH + + R++ E+ + +++ +VATS+L G++ A ++++ Sbjct: 1668 GIGLHHAGLQNKDRSLVEELFTNRKIQILVATSTLAWGVNFPAHLVIVKGTEYYDGKTKT 1727 Query: 401 ATPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM--FAGRLENLTPP 457 + LQ +GRAG Q K + + + + E + L L Sbjct: 1728 YVDYPITDVLQMMGRAGRPQFDDRGKAVIMVQNSKKTFYKRFLYEPFPVESYLLHVLPDH 1787 Query: 458 HNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSG-DF 516 N V T A+D L ++ R+ + L + + LSG + + Sbjct: 1788 LNAEIVAGTITTMQEALDYLTWTFFFRRLYSNPCYYGLENCEIKSVNNFLSGLITNACNQ 1847 Query: 517 SAFRPKLVWNRETG---ILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV 571 L +++ +L +L S T+ +++ + R+ Sbjct: 1848 LRDSSCLQYDQTDHNQYVLIPTTLGRLASYYYLSHLTM---KLFATTIQSTSSIHDLLRI 1904 Query: 572 -GELDEEMVYESRVND 586 E + R N+ Sbjct: 1905 LSSAHEYFLLPVRHNE 1920 >UniRef50_C7PFC4 DEAD/DEAH box helicase domain protein n=2 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PFC4_CHIPD Length = 716 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 163/847 (19%), Positives = 295/847 (34%), Gaps = 159/847 (18%) Query: 14 VFSPATRDWF-LRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 + S R + + + +Q +E + ++++ T SGKT AAFL L ++ Sbjct: 6 LLSEPIRRYINDKRWGAFRPIQSAAIKRILGTEDNYILVSRTASGKTEAAFLPILSKV-- 63 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 K ++LY+SP+ AL D ++ + I ++ + Sbjct: 64 --------DFKEPGVQVLYVSPLIALINDQFVRVEDLCRYI------------DVSITRW 103 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSK 188 G+ + KL + P +L+ TPES+ + T+ AR ++ ++IDE+H GS Sbjct: 104 HGEANQAAKKKLLKQPEGVLLITPESIESLFTNHPEHARALFSRLKFIVIDEIHTFLGSD 163 Query: 189 RGAHLALSLERLDALL-HTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 RG HL L R++ L + +GLSATV + F G V+ P + R Sbjct: 164 RGMHLRSLLSRINDLAADKKPRIVGLSATVGDYEEPKRFTGDPAHTKVLIDPTAKGINAR 223 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 + +E P + ++V + ++F N+RG AE+ Sbjct: 224 F--------------------KYFKQEDEYTPQFIEELYNQVKDSK-VLIFPNTRGNAEE 262 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + +L + + + HH +V KE R Sbjct: 263 IAVKLKRVSERKKGHPYFFS---------------------------HHSAVDKELREYV 295 Query: 368 EQALKSGELR--CVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 E K+ + C+ TS+LELGID+G V+ VIQV S+AS +QR+GR+G + G S+ Sbjct: 296 EDFAKTNKRNNFCIACTSTLELGIDIGTVETVIQVDATHSIASLIQRVGRSGRREGHESQ 355 Query: 426 GLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYS 484 L + + S E +E + P D++ QT++ + L Sbjct: 356 LLLYATEHWSTLQSFACWELFKEQFVEPVYSQEKPYDLMFHQTLSILKETNGLGRQALLQ 415 Query: 485 RVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVT 544 R++ + D+ LD + S R +L+ E LT Sbjct: 416 RLQNNPVFSRFSAAEIDSLLDYM---IKSEYIEDLRRELIVGAEGEKLTTSR-------D 465 Query: 545 SGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQ 604 M V+ +GEL E+ VND I L A W+I I Sbjct: 466 FYSMFMSAVMLKVI-------HAGVTIGEL--ELTPWLEVNDNILLSAKIWKIADIDLKA 516 Query: 605 VIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIAN 664 + P + P + + + + + L+ + + +++ Sbjct: 517 KKIFVIPANDGKKPVFTSGSGDVHPRIRQKMMELLNADLNRDEADDSA------IDSVNE 570 Query: 665 IQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIA--GRIH 722 I+ L ++ R + R +++ I +++ G +++E I Sbjct: 571 IKLLFKDFR--LDHLSAVRPAIVKH-------KEIDIYTFTGTKINETLFFLIKTLHIAA 621 Query: 723 ALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRE 782 L + + D+ I +L+ +R + + + Sbjct: 622 ELEDRKSRLRVFDNSINLN-------------------ELVANLRHQLLNIKM------H 656 Query: 783 CAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALE 842 + L G R W L +E LQ+ +D+P Sbjct: 657 VST---LFENGEDGFRLSKWAVYLPVELKVEY----------------VLQNSFDIPGTT 697 Query: 843 RLMRRLN 849 + L Sbjct: 698 AFLEGLQ 704 >UniRef50_B8I966 DEAD/DEAH box helicase domain protein n=8 Tax=cellular organisms RepID=B8I966_CLOCE Length = 741 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 153/773 (19%), Positives = 265/773 (34%), Gaps = 112/773 (14%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFR 71 +P R++ + + + VQ + V ++ H L+ A T SGKT AAFL L +L Sbjct: 9 RLAPFIREYIYTHGWTELRDVQLEACKVIFDTDDHLLLAAGTASGKTEAAFLPVLTQLHE 68 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 + +LYI P+KAL D L LK + ++ V Sbjct: 69 KPSSTIG---------VLYIGPLKALINDQFLRLDDLLKEV------------DIPVWHW 107 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHAVAGSK 188 GD +++ ++P IL TPESL M+ +R E + +IIDEVH S Sbjct: 108 HGDVSQSHKNRFMKDPRGILQITPESLESMIINRDNEISRIFGDLRFIIIDEVHVFMESD 167 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP-PAMRHPQIR 247 RG + LERL +RIGLSAT+ S +LG V P +IR Sbjct: 168 RGRQVLCLLERLSRYFEKEPRRIGLSATLGDYSLAEKWLGSGTKRRVATPKTETSQQKIR 227 Query: 248 IVVPV-ANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + V D + S + T +E ++ + + + ++F N+R AE Sbjct: 228 LAVEHFYISDPIDSKSKLTISSKDEVKEQNLTTDKYYEYIHSKCKAQKCLIFANNRTEAE 287 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 ++ L ++ A+ I HHGS+S R Sbjct: 288 QVITNLRQIAKAKS---------------------------LPDIYHVHHGSISASLREA 320 Query: 367 TEQALKSGELRCV-VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVS- 424 EQA+++ + V AT +LELGID+G ++ VIQ+ P SV+S LQR+GR+G + Sbjct: 321 AEQAMRAQDHPAVTAATVTLELGIDIGHLERVIQLGAPFSVSSFLQRLGRSGRRGSPPEM 380 Query: 425 -----------KGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVLAQQTVA-A 471 KG + L+ + I++ +E + P ++ Q ++ Sbjct: 381 WFACYEEASMDKGALPAQIPWQLIQTIAIIQLYLEERWIEPIEQKKCPFSLMYHQIMSIL 440 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 L +V +P+K++ + F L L + I Sbjct: 441 ITKGELSPAALAQKVLTLSPFKEVSQEDFKELLRHLI------------------KIDHI 482 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLP--EGEEKAGSRRVGELDEEMVYESRVNDIIT 589 ++ + + Y+V E K + +G + + + Sbjct: 483 QLTERKGLIVGLAGEQLVRSFRFYAVFAENVEYTVKDDTSEIGSI----INPPPPGERFA 538 Query: 590 LGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS 649 L +W + +I IV +W G G G +L + + L + Sbjct: 539 LAGNTWVVVEIDPKNKIVYSKKVNGRVRTYWSGGGGGIHIKLLQRMRKVLFEEKVYPYLK 598 Query: 650 GTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRV 709 L A L ++ G+ + G Sbjct: 599 EKAKERLQIARDFARRTELDKKSIFY------------------AGNNEYYIFPWMGTNE 640 Query: 710 HEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKL 762 + + + + + ++ + I ++ Sbjct: 641 FRTLDRWLRVQCSDVAKIRNIGGLPPYYLTIQSDVSNSEELLQVITNMAEREI 693 >UniRef50_C1FG69 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FG69_9CHLO Length = 1901 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 106/567 (18%), Positives = 202/567 (35%), Gaps = 70/567 (12%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P L D PA K +Q + + A S E+ LV APTG+GKT A + Sbjct: 107 PIEELDDWAQPAFA-----GMKSLNRIQSRIYEAAYHSNENLLVCAPTGAGKTNIAMMTV 161 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + + E +I+Y++P+KAL +V L+ + Sbjct: 162 LHEIGQHIEYG--ELAYGADFKIVYVAPMKALAAEVTGAFSRRLE------------PLG 207 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAV 184 ++V TGDT ++ +++TTPE ++ + +IIDEVH + Sbjct: 208 IQVRELTGDTQLTKKE---MEETHMIVTTPEKWDVITRKGGEVSVASSLRLLIIDEVHLL 264 Query: 185 AGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 +RG + + R + T+ + +GLSAT+ + +DVA FLG V + Sbjct: 265 ND-ERGPVIETLVARTHRQVETTQSMIRIVGLSATLPNPADVAKFLGVSDAGLFVFDQSF 323 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R + + G E + R+ + + + +VF +S Sbjct: 324 RPIPLTQMF------------VGVTEGNAMKRQMLMAQIAYDKCTAALRSGKQAMVFVHS 371 Query: 302 RGLAEKLTARLNELYAARLQR-------SPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 R K +L E+ A + + + + +N ++ Sbjct: 372 RKDTVKTAKQLGEIAANDQTQGGLELFAPENHPDFTTWKKEVERSRNNELKELFHRGFGC 431 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPL 404 H+ + + R + E+ +G ++ + T++L G+++ A +VI+ L Sbjct: 432 HNAGMLRSDRTLVERLFSAGVVKVLCCTATLAWGVNLPAHTVVIKGTTLYDPSKGGFRDL 491 Query: 405 SVASGLQRIGRAGHQV-GGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPH 458 V Q GRAG +G+ ++ L+ + +E F + L Sbjct: 492 GVLDVQQIFGRAGRPGFDTSGEGVIITEHKKLAHYLALLTHSTPIESQF---ISCLADNL 548 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFD---ATLDMLSGRYPSGD 515 N VL L ++R+ + L + + Sbjct: 549 NAELVLGTVCSVKEGAQWLGYSYLHTRMEKNPLAYGLTWDDVNLDPGLVRHRRKLVTEAA 608 Query: 516 FSAFRPKLV-WNRETGILTARPGAQLL 541 + R K+V ++ ++G + ++ Sbjct: 609 RTLHRAKMVRFDEKSGFIYQTEAGRIA 635 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 113/564 (20%), Positives = 205/564 (36%), Gaps = 58/564 (10%) Query: 4 NPDPSSLL-----PDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGK 57 P P L P++ D + F+ VQ Q ++ SE + L+ APTGSGK Sbjct: 959 PPVPRQALYPPENPELGRKEFFDLYEGKFEFFNKVQTQAFNTLFHSESNVLLGAPTGSGK 1018 Query: 58 TLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERR 117 T++A L + +I+YI+P+KAL + + + L Sbjct: 1019 TISAELAMMAAF-----------RDHPGGKIIYIAPLKALVRERIEDWKGKL-------- 1059 Query: 118 RRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLT-SRARETLRGVETV 176 +N ++ TGD R+ DI++ TPE + +AR + V V Sbjct: 1060 ---CKVLNKKLVELTGDYTPDIRALQG---ADIIVCTPEKWDGISRQWQARSYVTKVSLV 1113 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 +IDE+H + G+ RG L + + R+ + + +GLS + +A+D+A +LG Sbjct: 1114 VIDEIHLL-GADRGPILEVIVSRMRFISTRTERPVRIVGLSTALANANDLADWLG----- 1167 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 + + P + G + R ++ I + Sbjct: 1168 --IEKQEGPKSGLFNFKPSVRPVPLECHIQGYPGKFYCPRMMTMNKPTYAAI-RTHSPEK 1224 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIA 352 +VF +SR L AA + + +D E + S ++ + F Sbjct: 1225 PALVFVSSRRQTRLTAIDLIAYAAADERPDTFVHMDPYEMEMHLAKVKSPELRHTLQFGV 1284 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------AT 402 HH ++ E RA+ E+ +++ +V TS+L G+++ A +VI+ Sbjct: 1285 GLHHAGLAPEDRALCEELFLKCKIQVLVCTSTLAWGVNLPAHLVVIKGTEFYDGKTRRYV 1344 Query: 403 PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM--FAGRLENLTPPHN 459 + LQ +GRAG Q + + + + E + + L N Sbjct: 1345 DFPITDVLQMMGRAGRPQFDTSAVAVIMVHEPKKAFYKKFLYEPFPVESSLADQLPDHFN 1404 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF 519 V A+D L ++ R+ + + DL DA LS + Sbjct: 1405 AEVVAGTIRSKQDAVDYLTWTYFFRRLVKNPSYYDLESVEHDALNAFLSRLVENALAQLE 1464 Query: 520 RPKLVWNRETGILTARPGAQLLAV 543 + + E L ++ + Sbjct: 1465 DAQCLTIGEDDSLEPATMGRIASF 1488 >UniRef50_Q16RG8 ATP-dependent DNA helicase mer3 n=3 Tax=Culicini RepID=Q16RG8_AEDAE Length = 1199 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 124/608 (20%), Positives = 219/608 (36%), Gaps = 74/608 (12%) Query: 13 DVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYALDRLFR 71 D +P R F F+Q +Q + + +V APTGSGKT L + L + Sbjct: 34 DEIAPVFRHVFHE-FQQFNEIQSLVMDDMLYTDKSLVVSAPTGSGKTAIFELAMVRLLMK 92 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 ++ R++YI+PIKAL + + + + + ++ Sbjct: 93 -----LEDSRYEGDYRMIYIAPIKALCAEKFADWKGKFE------------PLGVKTAEV 135 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGSK 188 TGDT ++ ++++TTPE + T R R+ +R + V+IDEVH + Sbjct: 136 TGDTEMKDF--WDLPDCNLILTTPEKWNSI-TRRWRQNVNFVRMIRLVMIDEVHILNDQF 192 Query: 189 RGAHLALSLERLDALLH------------TSAQRIGLSATVRSASDVAAFLGGDRPVTVV 236 RG L + R+ ++ + I LSAT + +D+AA++G Sbjct: 193 RGPVLEAVVSRMRSIHRFVEGDGGESAVVDPMRIIALSATAPNVADLAAWVGEANTTCFY 252 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 N R P+ V R Y ++ + R ++ Sbjct: 253 NISESRR-------PIKIDKHVLGYYCDPSTSPF--RFDMNLNYKLFEVICKYSSGRPSL 303 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 VF ++R E + L E ++ RL A+ + + ++ + HH Sbjct: 304 VFCSTRKATESASKHLVEQHSLRLTPDQVSALQI----VANQLQNGDLKRRLLAGVGYHH 359 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV--------AS 408 +S R + E A ++G + + TS L +G+++ A ++I+ + +S Sbjct: 360 AGLSIADRQLIEDAFRAGRIPVLCCTSGLAMGVNLPAHLVIIKSTQMYTDYGMEEYPESS 419 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRTRRD------LVDSAVIVECMFAGRLENLTPPHNPLD 462 Q IGRAG R + L +V +E E+L N Sbjct: 420 IFQMIGRAGRPQFDTFGVAVIMTQRENVQKYERLATGSVPIESYL---HEHLAEHLNSEI 476 Query: 463 VLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPK 522 VL T A+AMD ++ Y R A LP + A ++ + +A Sbjct: 477 VLQTITDLASAMDWIRSTFLYVRALAAPARYGLPPNLDKAQIEKKLEELCLNELNALEKY 536 Query: 523 LVWNRETGILTARPGAQLLAVTSGGTIPDR--GMYSVLLPEGEEKAGS-RRVGEL----D 575 + + G + A G + +V L + + L D Sbjct: 537 SLIVKNAKDQGDDSGMMVSATLYGRLMAQYCLNFRTVKLLRKIKGTEPLLEIFTLLTYCD 596 Query: 576 EEMVYESR 583 E V++ R Sbjct: 597 EFAVFKCR 604 >UniRef50_Q6L634 Mer3 n=3 Tax=Coprinopsis cinerea RepID=Q6L634_COPCI Length = 1428 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 109/565 (19%), Positives = 201/565 (35%), Gaps = 53/565 (9%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P S LPD++ + + A+Q + ++ E+ ++ APTGSGKT+ L Sbjct: 179 PVSQLPDIYR-----AIFKKYGSFNAIQSACFDDLMQTDENLVISAPTGSGKTVLFELAM 233 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + + + S+ +YI+P KAL T+ + I Sbjct: 234 IRLQMQNRSGS-------RPSKCVYIAPTKALCTEKFNDWNTEFAPI------------G 274 Query: 126 LRVGIRTGDTPAQERSKLTR-NPPDILITTPESLYLMLT--SRARETLRGVETVIIDEVH 182 L+ TGDT R T+ I++TT E + S V +++DEVH Sbjct: 275 LKCCELTGDTSVFGRDIWTQAKDASIIVTTGEKWDSLTRNWSDHERIFSLVHLLLVDEVH 334 Query: 183 AVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 + G RG+ L + + R+ L ++ + + +SATV + D+AA++G + PA Sbjct: 335 VL-GETRGSTLEVVVSRMK-LRGSATRFVLVSATVPNIEDIAAWIGNSKKSG----PARV 388 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 P V ++ + + G++ + +VF N+R Sbjct: 389 LKFGEEYRPCKLAKHVIGFGRRKEQNDF--QFARVLDSKLFGVIQHHSAGKPILVFVNTR 446 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKE 362 + +L + Y + + ++ + HH ++ E Sbjct: 447 KGVFQTAEQLMKEY-KECETKRLPVPWTHPSRVDTSFHDKKLTELVSYGIGVHHAGLTME 505 Query: 363 QRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ--------VATPLSVASGLQRIG 414 R EQ +R +V TS+L +G+++ A ++I+ V+ S +Q +G Sbjct: 506 DRRAIEQLYIQKLIRVLVTTSTLAVGVNLPAHLVIIRGVQTFQNGVSVEYSDLDVMQMLG 565 Query: 415 RAGH-QVGGVSKGLFFPRTRRDL-VDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAA 471 RAG Q + + ++ + L NL N L T Sbjct: 566 RAGRPQFDTEGTAVIMCESELAPKYEALTQGTTVLESSLHRNLAEHINSEIGLGTITSIE 625 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 +A L+ + R+++ W + DAT + + ++G Sbjct: 626 SAKAWLRESFLFQRLQKNPSWYSIDNENGDATWQERLDNVVLKSIEQLQANKLVQFKSGS 685 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYS 556 LA T G I + Sbjct: 686 SLKT-----LASTEYGEIMSKFYIR 705 >UniRef50_B3L1P3 U5 small nuclear ribonucleoprotein-specific protein, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L1P3_PLAKH Length = 2605 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 99/541 (18%), Positives = 187/541 (34%), Gaps = 90/541 (16%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYA 65 S LP+ + + A+Q + VA ++ L+ APTGSGKT A L Sbjct: 681 VSELPEWAQEV---FTCVGISKLNAIQSKVHEVALHMYEKNMLICAPTGSGKTNIALLCM 737 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L+ + + +I+YISP+KAL + ++ + LK +N Sbjct: 738 LNVIGTYRLRSG--NIDKNNFKIIYISPMKALVNEQVQSFSLRLK------------CLN 783 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHA 183 ++V TGD + +++ TPE ++ + + E L+ ++ +I DE+H Sbjct: 784 MKVSELTGDVNLSSKE---IEESQVIVMTPEKFEVI-SRKWNEKILLQKIKLIIFDEIHL 839 Query: 184 VAGSKRGAHLALSLERLDALL-----------------------------HTSAQRIGLS 214 + RG L + R++ + + +GLS Sbjct: 840 LNEI-RGNVLESIISRINRYVDNTLVYDGGVAHGVQNEVNGDQQNDLNMRRKKIRLVGLS 898 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 AT+ + DV FL D V P + G E + Sbjct: 899 ATLPNYEDVGMFLRADLRSGVFYFDYSFRPV-----------QLEQHYIGIKEKKGIKKY 947 Query: 275 GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE 334 + +L+E ++ ++F +SR + L E + + + E Sbjct: 948 ALMNQVTYEKVLEEAGKN-QILIFVHSRKETYRTAKMLIEKFLKSDNLNKFLMGKKVSSE 1006 Query: 335 ----STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGID 390 + ++ F HH + + R + E L+ +V+TS+L G++ Sbjct: 1007 ILLSEKEAIVNEELKEILPFGFGIHHAGMKRTDRKLVEDLFSDRHLQVLVSTSTLAWGVN 1066 Query: 391 MGAVDLVIQVAT----------PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR----- 434 + A ++I+ + LS LQ +GR+G Q K + + Sbjct: 1067 LPAHTVIIKGTSVYNISVGDFDELSPMDILQMVGRSGRPQYDKSGKAIIITEHKNLQLYL 1126 Query: 435 DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKD 494 L + + +E N+ N VL ++ + Y R+ + Sbjct: 1127 SLNNEQLSIESTLMK---NIVNVINSEIVLKNIQNIKEGVNWFRYTYLYIRMMKNPELYG 1183 Query: 495 L 495 + Sbjct: 1184 I 1184 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 45/356 (12%), Positives = 104/356 (29%), Gaps = 50/356 (14%) Query: 209 QRIGLSA-TVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 + + LS+ ++ + D+ ++G + ++R+ I I Sbjct: 1874 RIVCLSSCSINNCKDIGEWIGCKKSDYYNFLSSVRNVPIEI------------YLHAVSI 1921 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRS-PSI 326 + R S+ + + + ++ I+F + + L L ++ Sbjct: 1922 MNKQNRYLSMQRQVYQTVRKL--KKKNAIIFVTEDKMCKTLALDLVLSACNDGCSFFSNL 1979 Query: 327 AVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLE 386 + + ++++ +R + E ++ ++ Sbjct: 1980 GGSTGKENLEDHLQDRLLVELLKQGVGYLYRNMNEMERKVVEALFDKKAIQLLIV----- 2034 Query: 387 LGIDMGAVD----------LVIQVAT----------PLSVASGLQRIGRAGHQV-GGVSK 425 A D +VI + T S+ S LQ + AG + S Sbjct: 2035 ------AHDYVYRLNVYGNVVILLDTIITHFDGKEEDYSIQSVLQMLSYAGREGEDTKSF 2088 Query: 426 GLFFP-RTRRDLVDSAVIVECMFAGRLENLTPP-HNPLDVLAQQTVAAAAMDALQVDEWY 483 + T+++ + + +E+ P N V+ A+D + +Y Sbjct: 2089 VYIYTYITKKEYYKNFIYEPLTVESNMEDNLPNFLNNEIVMNTIENYQDAIDWITWSFFY 2148 Query: 484 SRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQ 539 R+R+ + L + D LS S V E A+ Sbjct: 2149 RRIRKNPNYYGLKGVSNEHISDYLSELIESNIELLSFANCVLVEEGEDSKQGKKAR 2204 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 62/226 (27%) Query: 15 FSPATRDWFLRAFKQPTAVQPQTWHVAAR-SEHALVI--------APTGSGKTLAAFLYA 65 F A + + R + Q + + ++ P A Sbjct: 1600 FEEAKKFFHSRNITHFNPIHTQIFPSVYEMGGNVIICSSPGRYYLTP--------AEFAI 1651 Query: 66 LDRL-----------------------FREGGEDTREAHKRKTS-RILYISPIKALGTDV 101 L + R+ + +I+Y++P++ + + Sbjct: 1652 LKMIRSVMELNSFIRRYIKKEDDLYKIIRDRNIAHIAYNNPMEFIKIVYVAPLEEVVSKT 1711 Query: 102 QRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLM 161 N T +++ I TGD + +I++ TP+ Sbjct: 1712 YDNWTSF------------ATSFGMKMAILTGDVQVDTK---ILQKNNIILCTPDRYNN- 1755 Query: 162 LTSRARE--TLRGVETVIIDEVHA-VAGSKRGAHLALSLERLDALL 204 L+ + R + + + D H + G+ + + + R+ + Sbjct: 1756 LSKKWRRKKIFQSINLYVFD--HMELLDLSEGSMMEVVISRVRYIA 1799 >UniRef50_C6H1C9 Activating signal cointegrator 1 complex subunit 3 n=2 Tax=Saccharomyceta RepID=C6H1C9_AJECH Length = 1999 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 116/580 (20%), Positives = 206/580 (35%), Gaps = 72/580 (12%) Query: 24 LRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHK 82 + +K +Q + VA ++ E+ L+ APTG+GKT AA L L+ + + + E H Sbjct: 278 FKGYKSLNRMQSLLYPVAYKTNENMLICAPTGAGKTDAAMLTILNVIAKNTIPNPLENHD 337 Query: 83 -------RKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 +I+Y++P+KAL +V L L + + V TGD Sbjct: 338 ATEFAVITNEFKIVYVAPMKALAAEVTEKLGKRLAWL------------GIEVRELTGDM 385 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSR--ARETLRGVETVIIDEVHAVAGSKRGAHL 193 ++ + I++TTPE ++ E ++ V +IIDEVH + +RGA + Sbjct: 386 QLSKKEIVQ---TQIIVTTPEKWDVVTRKGTGDTELVQKVRLLIIDEVHMLHD-ERGAVI 441 Query: 194 ALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVV 250 + R + ++ + +GLSAT+ + DVA FL +R + A Sbjct: 442 ESLVARTQRQVESTQSLIRIVGLSATLPNYIDVADFLKVNRMAGLFYFDASFR------- 494 Query: 251 PVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTA 310 PV V G+ ++ + + + R +VF +SR Sbjct: 495 PVPLEQHFVGV---KGDAGSKKSRENLDIVCFEKVRNMLERGHQVMVFVHSRKETVNAAR 551 Query: 311 RLNELYAARLQRSPSIAVD----AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 L ++ ++ A + ++ HH +++ R + Sbjct: 552 LLYQMAVENRCADLFSPLEHKNYAQALRDVKTSRGRELRDLVPKGLGIHHAGMARSDRNL 611 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS----------VASGLQRIGRA 416 E+ G L+ + T++L G+++ A ++I+ S + LQ GRA Sbjct: 612 MERLFSQGVLKVLCCTATLAWGVNLPAAAVIIKGTQLYSAQEGKPIDLGILDVLQIFGRA 671 Query: 417 GHQVGGVSKGLFFPRTRRDL------VDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVA 470 G + F T L V S +E F+ +L N L T Sbjct: 672 GRPQFQDTGIGFICTTHNKLQHYLSAVTSQEPIESRFSRKL---VDNLNAEISLGTVTSI 728 Query: 471 AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETG 530 + A+ L ++R + P D + GR S W Sbjct: 729 SEAVQWLGYSYLFTRFD--YQRRPNPAEEPDDYIQWADGRAASQR--------RWQNCKS 778 Query: 531 ILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRR 570 IL ++ D + ++ GE R Sbjct: 779 ILRVATSVEIFNAMMTPMANDADVMKMISMSGEFDNIQSR 818 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 114/576 (19%), Positives = 209/576 (36%), Gaps = 72/576 (12%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P S L + P D + + F+ +Q Q +H + + L+ +PTGSGKT+AA L Sbjct: 1096 PLPISALKN---PILEDIYAQRFQFFNPMQTQIFHTLYHTPANVLLGSPTGSGKTVAAEL 1152 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 ++ S+++YI+P+KAL + ++ + L Sbjct: 1153 AM-----------WWAFREKPGSKVVYIAPMKALVRERVQDWRRRLTA-----------P 1190 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 + L++ TGD R+ DI+ITTPE + S + R +R V VIIDE+H Sbjct: 1191 MGLKLVELTGDNTPDTRT---IRDADIIITTPEKWDGISRSWQTRGYVRQVSLVIIDEIH 1247 Query: 183 AVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + GS RG L + + R++ + S + +G+S +A+D+ +LG + Sbjct: 1248 LL-GSDRGPILEIIVSRMNYIASQSKGSVRLLGMSTACANATDLGNWLGVKEGLFNFR-- 1304 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 V PV + G S+ I + + IVF Sbjct: 1305 -------HSVRPVPLEIFIDGFPEQRG---FCPLMQSMNRPIF-LAIKNHSPEKPVIVFV 1353 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGS 358 SR L + + + S + ++ + F HH Sbjct: 1354 ASRRQTRLTAKDLINFCGMEDNPRRFLHMSEEDLQLNLSRVKDSSLKEALSFGIGLHHAG 1413 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVAS 408 + + R ++E+ + +++ +VATS+L G+++ A +V++ + + Sbjct: 1414 LVESDRQLSEELFANNKVQILVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYKDMDLTD 1473 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM-FAGRLENL-TPPHNPLDVLA 465 LQ +GRAG Q F + + + L + Sbjct: 1474 VLQMLGRAGRPQFDSSGIARIFTQDSKKGFYKHFLHTGFPVESTLHKVLHDHLGAEISAG 1533 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA--------TLDMLSGRYP-SGDF 516 T A+D L ++ R+ + + L + D + S + Sbjct: 1534 TITTKQDALDYLTWTFFFRRLHKNPSYYGLEISAEEHNTMAAQQMASDFMIELVDKSLEE 1593 Query: 517 SAFRPKLVWNRETGILTARPGAQL--LAVTSGGTIP 550 A ++ + TG + P ++ S TI Sbjct: 1594 LAESSCVLLDSATGDVDPTPYGKIMSYYYLSHKTIR 1629 >UniRef50_B7FQ60 Predicted protein (Fragment) n=2 Tax=Bacillariophyta RepID=B7FQ60_PHATR Length = 1589 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 127/575 (22%), Positives = 211/575 (36%), Gaps = 76/575 (13%) Query: 14 VFSPATRDWFLRAFK---QPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRL 69 +AF+ +Q + VA ++ LV APTG+GKT A L + Sbjct: 33 RIHEVLETDPAKAFEGTVSLNPMQSSVFEVAYLHRDNLLVCAPTGAGKTNVAMLSVVAHF 92 Query: 70 FREGG-EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 G R +++YI+P+KAL +V LKG+ L V Sbjct: 93 RDVGLIASDRTTVLETGRKVIYIAPMKALAQEVVEKFSAKLKGLR------------LTV 140 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVA 185 TGD + ++L +++TTPE ++ + +IIDEVH +A Sbjct: 141 RELTGDM---QLTRLQAEAAHVIVTTPEKWDVVTRKSGTDENALGNQCGLLIIDEVHLLA 197 Query: 186 GSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 +RGA + + RL L+ + A+ +GLSAT+ + DVA+FL P R Sbjct: 198 D-ERGAVIESVVSRLHRLVESRQKQARIVGLSATLPNYQDVASFLKVPERGLFFFGPEHR 256 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 PV V++GT +E + +LD + R +VF +SR Sbjct: 257 --------PVPLQQQFIGVSAGT--KDRFAKEKRMNEICFDVVLDSLQRGYQVMVFVHSR 306 Query: 303 GLAEKLTARLNELYAARL----------QRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 L E+ + + S + H E + + V Sbjct: 307 KGTGDTAKSLAEMASHEGVLERYFVTAGKEGSSGDAYSRHAEKVKKSRNREVGMHFANGM 366 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL----GIDMGAVDLVIQVA------- 401 HH + + R +TEQ G ++ +V T++L G + A +VI+ Sbjct: 367 GIHHAGMLRGDRKLTEQVFSDGAIKVLVCTATLAWQVFRGFRLPAHTVVIKGTEVYNPEK 426 Query: 402 ---TPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR------DLVDSAVIVECMFAGRLE 452 LS+ Q GRAG S + D + AV +E F ++ Sbjct: 427 GGVVDLSILDVQQIFGRAGRPQFDTSGEATMITSIDAFPRYMDKLVRAVPIESNF---IK 483 Query: 453 NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR-- 510 +L N V T A+ L Y+R+RR + ++ ML GR Sbjct: 484 HLADHLNAEVVGGTVTNIQEAVTWLTYTYLYTRMRRNPIGYGIKEDEKNSDP-MLKGRCN 542 Query: 511 ---YPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + + +++++G L+ ++ A Sbjct: 543 ELVREAAKLLDLNRMIRYDQQSGNLSVADRGRVAA 577 Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats. Identities = 106/577 (18%), Positives = 196/577 (33%), Gaps = 85/577 (14%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTLAAF 62 +P P + L + R FK ++Q Q +HV ++ L+ APTGSGKT+ A Sbjct: 920 SPVPVTSLAECKYEQL----YRNFKCFNSIQSQLFHVLYHTDSPVLLGAPTGSGKTIVAE 975 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L +YI+P+K+L + + +I L G Sbjct: 976 LALLRM-----------KRIFPKGICVYIAPLKSLARERLKEWKIRL----------GSA 1014 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE-------------T 169 + ++ +GDT + D+L+ TPE +++ R Sbjct: 1015 PLRWKILELSGDTHHDQG---VVESADVLVCTPEKWD-LISRGWRSYVKAEASENAGKAF 1070 Query: 170 LRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLH----------TSA-----QRIGLS 214 ++ V+ +++DEVH + G +RGA L + R + + + IGLS Sbjct: 1071 VKRVKLLVLDEVHLL-GEERGAVLEAIVSRTRFISQFVEEQNNAKTSKPKEDVTRIIGLS 1129 Query: 215 ATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGRE 274 + + D+A ++G D T R + ++ G + R Sbjct: 1130 TALANPLDLADWIGIDTRNT----GPTRMRGLYNFSSSVRPVPLTVHVQGYPGRHYCPRM 1185 Query: 275 GSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE 334 ++ I E + ++F SR + AA + + + Sbjct: 1186 ATMNKPCFAAI-KEYSPAKPVLIFVASRRQTRLTAFDIISYAAAEANPKRFLKCNEEVVD 1244 Query: 335 ST-SGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGA 393 + + + ++ + F HH +S R + E SG+++ +VATS+L G++ A Sbjct: 1245 AIINTVSDEALRHTLAFGIGLHHAGISSHDRDVVETMYLSGKIQVLVATSTLAWGVNTPA 1304 Query: 394 VDLVIQV----------ATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR------DLV 437 ++++ + LQ IGRAG T + Sbjct: 1305 HLVIVKGTEYFDGKSSRYVDYPLTDVLQMIGRAGRPGFDDRGSAVVMSTEDKKPFYKKFL 1364 Query: 438 DSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR 497 S VE GR+ N A+ L + RVR + + Sbjct: 1365 YSPFPVESCLTGRIH---ENLNAEIASGTIGSVLEAVGYLTWTFYARRVRANPSFYG-AQ 1420 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTA 534 + ++ L + + ++ L A Sbjct: 1421 SSSEEDVEHLLVSIVKSTLRDLEDQGCVSIQSDELEA 1457 >UniRef50_C0WD26 DEAD/DEAH helicase n=13 Tax=Bacteria RepID=C0WD26_9FIRM Length = 756 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 142/748 (18%), Positives = 249/748 (33%), Gaps = 118/748 (15%) Query: 10 LLPDVFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALD 67 + D ++P +D+ + + + +Q ++ + L+ A T SGKT AAF L Sbjct: 2 SIFDEYAPFVQDFIYRNGWDELRPIQVAAGDAIFHTDDNLLLTASTASGKTEAAFFPILS 61 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 +A+ K+ +YI P+KAL D + L ++ N+ Sbjct: 62 ---------LFDANPPKSVGCIYIGPLKALINDQFQRLTDLC------------SDGNIP 100 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAV 184 + GD ++KL R+P IL TPESL +L + + V+IDEVH++ Sbjct: 101 IWHWHGDVSQSHKAKLMRHPSGILQLTPESLEAILLHKHMAVPRLFGDLRFVVIDEVHSL 160 Query: 185 AGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP----A 240 RG +ER+ L + +RIGLSAT+ AFL + P Sbjct: 161 LRGDRGGQTLCLIERVSRLAGVNPRRIGLSATMGDPERTGAFLSLGTGRRTIIPRIQSKG 220 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI--LDEVLRHRSTIVF 298 R V + + + + G+ + E R + +VF Sbjct: 221 SRWRLSLEHFYVKDTQAGEGRTDIKALPVLDEKTDTAPREADPGLGYIFEHTRGKKCLVF 280 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 NSR E +T L + + + HHG+ Sbjct: 281 VNSREECEGVTTSLRQYCELNHEADRFL---------------------------IHHGN 313 Query: 359 VSKEQRAITEQALKS-GELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAG 417 +S R E +K + V TS+LELGID+G ++ Q+ P +V+S LQR+GR G Sbjct: 314 LSASYRETAEMLMKDESKPLTTVTTSTLELGIDIGRLERAFQIDAPWTVSSFLQRMGRTG 373 Query: 418 HQV------------GGVSKGLFFPRTRRDLVDSAVIVECMF-AGRLENLTPPHNPLDVL 464 + + L L+ + +++ +E P +L Sbjct: 374 RRALPQEMWYVIREDEPEIRALLPATIPWKLLQACALIQLYLEERWVEPPRLDRLPFSLL 433 Query: 465 AQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKL 523 QT++ A+ + E SRV + + + L L Sbjct: 434 YHQTMSVLASCGEMSPAELASRVLTLNYFHRITPDDYRVLLHHLI--------------- 478 Query: 524 VWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYE 581 + I G ++ + I Y V E ++ S+ +G + V Sbjct: 479 ---QTDHIQLTEKGGLIVGLAGERVINSFKFYGVFQESEEYTVRSESQELGTV----VAP 531 Query: 582 SRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNG-RPAELGEMIGDFLH 640 + I L WR+ ++ R + ++ ++P + GE G ++ + + L Sbjct: 532 PPPGEKIALAGHVWRVLEVDRKRHLIY-CEMVKGKVPAYFGECPGDLHTKVLKRMRQVLR 590 Query: 641 LLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRII 700 + L + A G +E +G Sbjct: 591 EDTLYPYLMKNAVSRLTQARCTATQSGAADENLIF------------------LGGKMWC 632 Query: 701 LHSPYGRRVHEPWAVAIAGRIHALWGAD 728 G + + G Sbjct: 633 FIPWLGTYGFLAMERFLRLKCGDKLGLK 660 >UniRef50_Q4PHY1 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PHY1_USTMA Length = 1962 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 117/582 (20%), Positives = 212/582 (36%), Gaps = 73/582 (12%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDR 68 +P+ P R F +K +Q + +A ++ E+ LV APTG+GKT A L + Sbjct: 359 PIPE-MDPICRGAFP-GYKSLNRLQSAVYPLAYKTNENLLVCAPTGAGKTDVAMLTVMRA 416 Query: 69 LFRE--------GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRG 120 + + G ++ +I+Y++P+KAL +V R L+ + Sbjct: 417 ISQYARNLEPTAGNAGQGFDIRKNDFKIIYVAPMKALAAEVVRKFSKRLQYL-------- 468 Query: 121 ETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVII 178 ++V TGD + ++ +++TTPE ++ E V +II Sbjct: 469 ----GIKVRELTGDM---QMTRQEIAETQMIVTTPEKWDVVTRKPTGEGELATKVRLLII 521 Query: 179 DEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVTV 235 DEVH + +RG+ + + R L+ +S + +GLSAT+ + DVA FL +R + Sbjct: 522 DEVHLLHD-ERGSVIETIVARTLRLVESSQSLIRIVGLSATLPNYVDVADFLRVNRWQGL 580 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 + P VP+ G+ ++ + + V Sbjct: 581 FYFDSSFRP-----VPLEQ-----HFLGVKGKAGSQQSRANLDKACFEKVSELVQAGHQV 630 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE------STSGATSNRVQSSDV 349 +VF ++R K L E++ A + + + ++ Sbjct: 631 MVFVHARKETVKTAQTLREMFREEAMGDILQASADENPRKAFFKKELQSSRNREMKELFD 690 Query: 350 FIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA-------- 401 HH + + R ++E+ ++G R + T++L G+++ A +VI+ Sbjct: 691 TGFGIHHAGMLRTDRTLSERMFEAGVTRVLCCTATLAWGVNLPAYAVVIKGTDVYDSSAG 750 Query: 402 --TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLEN 453 LS+ LQ GRAG Q + G R D + S +E F G Sbjct: 751 KFVDLSILDVLQIFGRAGRPQYEDLGVGYILTSQDRLSHYVDAITSQHPIESKFIG---G 807 Query: 454 LTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGR--- 510 L N L + L ++R++R + + + R Sbjct: 808 LIDSLNAEISLGTVASVRDGVSWLGYTYLFTRMKRTPLTYGMTYDEVADDPHLGAKRQQL 867 Query: 511 YPSGDFSAFRPKLV-WNRETGILTARPGAQLL--AVTSGGTI 549 +G K+V N T L A ++ TI Sbjct: 868 ISNGVKKLVEAKMVEHNPVTDRLQATDLGRIAAKYYIGYRTI 909 Score = 79.2 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 88/599 (14%), Positives = 170/599 (28%), Gaps = 114/599 (19%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLFRE 72 + + + + F A+Q Q++H + + L+ PT SGK+ A + L + Sbjct: 1225 LADELLCEMYAQDFSAFNALQTQSFHTLMHTSANTLLCGPTASGKSTVAAMAVWRALHQA 1284 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 H ++ + L + + + LK E +R + L Sbjct: 1285 VQGCIIIVHSKRDT----------LASATKSTMVAALKQKRIEVKRSSLSREVLPFVCND 1334 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAH 192 G +L TT SL L +R ++ + V ++ +++H + Sbjct: 1335 G------------LGARVLFTTSISLLRALEAR-QDLVGHVSLLVAEDMHLLDPGY---- 1377 Query: 193 LALSLERLDALLHTS-----------AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAM 241 + L R S + + SA++ AS +A ++G D T P Sbjct: 1378 -EMMLARFMWCCARSRADSSQGAISMPRIVATSASLSDASSLAQWIGADELSTYNFDPKD 1436 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 R + G + +G ++ + E + IV S Sbjct: 1437 RPSILNTSF------------QGFDQPHSSGLLKTMVKPAFDK-MKECRANGPAIVVVPS 1483 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFEST-SGATSNRVQSSDVFIARSHHGSVS 360 + L AA + + + + ES + + V H Sbjct: 1484 IWQCFTAASDLITKAAADMDIDGYLGLPSEEIESILPHILDTSLHEALVHGIGIVHERTV 1543 Query: 361 KEQRAITEQALKSGELRCVVAT------SSLELGIDMGAVDLVIQVA------------- 401 + R + E L+ V+ T ++L A +V+ Sbjct: 1544 AQDRTVIEHLYDQHLLKVVIITRDCLWNTTLR------AALVVVMSTQYVRISKAHSTGA 1597 Query: 402 -----TPLSVASGLQRIGRAG----HQV-----GGVSKGLFFPRTR-----RDLVDSAVI 442 ++A GRA + L +T ++ + + Sbjct: 1598 SDRELVDYTLAEL----GRAQSLAVRPGTLCDPNPPGECLVLCQTDKAKMLEKMLQTGMP 1653 Query: 443 VECMFAGRLENLTPPHNPLDVLAQQTVAAA-----AMDALQVDEWYSRVRRAAPWKDLPR 497 + E P VL + A +D L + + R + D Sbjct: 1654 LHSCLLQD-ERGGAPLLA-TVLGEVVQGAITREEQVLDVLSWTILPAELMRNPTYYDCEC 1711 Query: 498 RVFDATLDMLSGRYPSGDFSAFRPKLVW-----NRETGILTARPGAQLLAVTSGGTIPD 551 + L+ + KLV L + L + SG T+ Sbjct: 1712 NERHSVAARLTAVASELIQTLCELKLVEKHSESKDGNSSLKYTGLGKALHLQSGSTLMH 1770 >UniRef50_C4FYH2 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FYH2_ABIDE Length = 721 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 143/672 (21%), Positives = 250/672 (37%), Gaps = 108/672 (16%) Query: 13 DVFSPATRDW-FLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRLF 70 + +P +D+ + +++ +Q + ++ + L+ PT SGKT AAFL + +L+ Sbjct: 5 EKLAPFVQDYIYRNGWEELREIQVAACDIIFNTDHNLLIATPTASGKTEAAFLPVITKLY 64 Query: 71 REGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGI 130 K+ +LYI+P+KAL D ++ L+ + V Sbjct: 65 N---------KPSKSVGVLYIAPLKALINDQFSRIEELLEEAY------------IPVTK 103 Query: 131 RTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEVHAVAGS 187 GD +++L +NP IL TTPESL M+ R + + +IIDEVH G Sbjct: 104 WHGDVSVNMKNRLLKNPSGILQTTPESLEAMIMKRKEQAVKLFSDLRYIIIDEVHNFIGE 163 Query: 188 KRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 +RG L LERL L +RIGLSAT+ +L G V P + Sbjct: 164 ERGTQLISLLERLSKLTGIVPRRIGLSATLGDIEGTEKWLSGGTGRLCVTPETGIKKR-- 221 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 M +D E + + R + +I+F+NSR E+ Sbjct: 222 -----KAMVMAEHFYEFPLQDEKHKNENLFFESLYNL-----TRGKKSIIFSNSRAEVER 271 Query: 308 LTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 L ++ + + + HHGS+S R Sbjct: 272 NIVNLKDIASKKGEPDVF---------------------------MVHHGSISASDREYV 304 Query: 368 EQALKSGELRCVV-ATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKG 426 E+ ++ + V AT +LELGID+G ++ ++QV P SVAS QR+GR+G + G Sbjct: 305 EEQMRLSNMPLVAGATVTLELGIDLGDLERIVQVGCPKSVASLSQRLGRSGRRSGVSEMC 364 Query: 427 LFFPRTR------------RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM 474 F + V ++E R+E + P + P +L QT++ Sbjct: 365 FLFDEDKQSESSEFYKLVNWSFVKCIALIELYRENRIEPVLPENYPFGILYHQTMSYLYG 424 Query: 475 -DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILT 533 ++ D + + + + + L + + I Sbjct: 425 RGEIKPDLLAQNLLSEYVFSHISKEDYRELLCFML------------------KTGQIEK 466 Query: 534 ARPGAQLLAVTSGGTIPDRGMYSVLLPEGEE--KAGSRRVGELDEEMVYESRVNDIITLG 591 G ++ + + YSV + E + GS +G L M + + LG Sbjct: 467 TETGGLIIGLEGEKIVNHYDFYSVFESDVEYSVREGSHEIGTLTRLM----QPDTTFVLG 522 Query: 592 ATSWRIQQITRD--QVIVTPAPGRSARLPFWRG-EGNGRPAELGEMIGDFLHLLADGAFF 648 +W + + ++ + V A G+ + W G + + + + + AD + Sbjct: 523 GKTWLVTETDKENKTIYVEKAKGKPPTV--WDGTGEVIEHTMVLKKMKEIIISDADYPYL 580 Query: 649 SGTIPPWLAEEN 660 L+E Sbjct: 581 GEGAKTRLSEIR 592 >UniRef50_Q385X9 ATP-dependent RNA helicase, putative n=8 Tax=Trypanosomatidae RepID=Q385X9_9TRYP Length = 2196 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 124/631 (19%), Positives = 209/631 (33%), Gaps = 93/631 (14%) Query: 4 NPDPSSLLPDVFS-------PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGS 55 P +LP+ P +Q + A + ++ LV APTG+ Sbjct: 449 PPPERKVLPEEDRVCIATSLPEWTHAAFLNITHLNTIQTSLFRTAFHTSQNMLVCAPTGA 508 Query: 56 GKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADE 115 GKT+ L L + + + + +I++I+P+KAL ++ N L A E Sbjct: 509 GKTVCGLLVMLRCIEEQRVD----GVLDRNFKIIFIAPMKALAQEMVENFSRRLAPFAME 564 Query: 116 RRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR-GVE 174 V TGD +R +++TTPE ++ +A E L V Sbjct: 565 ------------VRELTGDMQLTKRE---LAQTQVIVTTPEKWDVITRKQANEELTTQVR 609 Query: 175 TVIIDEVHAVAGSKRGAHLALSLERLDALLH------TSAQRIGLSATVRSASDVAAFLG 228 +IIDE+H + RG L + R + +GLSAT+ + DVA FL Sbjct: 610 LIIIDEIHLLNED-RGPVLEAIVARTLRQGELASEQKHRTRLVGLSATLPNYKDVANFLR 668 Query: 229 GDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDE 288 D + A PV + G + E + ++ Sbjct: 669 VDLAEGLKVFGAEYR-------PVPLEQSFIGLRMGLKDK-----ERRMDQLAYEEVVRN 716 Query: 289 VLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA---TSNRVQ 345 V +VF +SR L E R + + E+ + Sbjct: 717 VREGHQVMVFVHSRKQTVALARFFMEEANVRGHEALFKQDETVPKEAQKLGCSLQGRDLS 776 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ---VAT 402 + +HH + + R TE + G +R +V TS+L G+++ A ++I+ + Sbjct: 777 NLFAAGFGAHHAGLIRYDRTSTENLFRKGFIRVLVCTSTLAWGVNLPAHSVMIRGTHIYD 836 Query: 403 P-------LSVASGLQRIGRAGHQVGGVSKGLFFPRTRRD------LVDSAVIVECMFAG 449 P +SV +Q GRAG S ++ L+ A+ +E Sbjct: 837 PKRGGLVSMSVLDVMQIFGRAGRPQYDTSGHGTIISDEKEVGRYLRLLACALPIESKLQ- 895 Query: 450 RLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG 509 E L N + L+ + R+R L + Sbjct: 896 --EGLCDHLNAEIHAGTISSIVEGSGWLEYTYLWQRLRVNPLMYGLKVSDARQDPKLKKI 953 Query: 510 RYP----SGDFSAFRPKLVWNRETGILTARPGAQL--LAVTSGGTI---------PDRGM 554 RY + + A + +N +TG + ++ S +I PD Sbjct: 954 RYEIVSKAAEELADAGMIRYNPQTGAVDTTDLGRIASHYYISYKSIATFNTKMRRPDESW 1013 Query: 555 Y---------SVLLPEGEEKAGSRRVGELDE 576 +V+ E R ELDE Sbjct: 1014 IDSLDLGAAMNVVACADEFSQLRVRQEELDE 1044 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 109/530 (20%), Positives = 192/530 (36%), Gaps = 67/530 (12%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTL 59 + P ++P+ + F++ VQ Q +H ++ + APTGSGKT+ Sbjct: 1320 LPLAPLRREVIPEKYHTIYES-----FREFNPVQTQVFHAMYHTDSSIFLGAPTGSGKTI 1374 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 AA + L S+++YI+P+KAL + ++ Sbjct: 1375 AAEMSILR----------LFEKYPVGSKVVYIAPLKALVKERVKDWMARFS--------- 1415 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVII 178 + RV +GD + + DIL TTPE + S + R + V VI Sbjct: 1416 --RRLGRRVLELSGDVTPDITALVQ---ADILCTTPEKWDGLSRSWQVRRYVTAVRLVIF 1470 Query: 179 DEVHAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 DE+H + GS RG L + + R+ + + + IGLS V + +D+ ++LG V Sbjct: 1471 DEIHML-GSDRGPILEVIVSRMRFIGWHRNAPIRLIGLSTAVANPADLTSWLGVSHKWAV 1529 Query: 236 VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRST 295 N V PV ++ ++ R ++ + I ++ ++ Sbjct: 1530 FNFDPS-------VRPVPMRVHIAGYH----GRNYCPRMAAMNKPVYNAICEK-SPNKPV 1577 Query: 296 IVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARS 354 IVF +SR L + + +D + + + V+ F Sbjct: 1578 IVFVSSRRQTRLTAMALIGFLVMEQNTAKFVRMDVEEVNAYVAKVSDPYVKHCMQFGVGV 1637 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPL 404 HH + + R + E A G+L+ +VATS+L G++ A +V++ Sbjct: 1638 HHAGLLEGDRTVVESAFLKGKLQVLVATSTLAWGVNFPAHMVVVKGTEYYDGKTKTYVDF 1697 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPH 458 + LQ IGRAG Q + + VE +L Sbjct: 1698 PITDVLQMIGRAGRPQFDTEGVAQVLCHEPKKGFYRKFLYDPFPVESALHRQLH---THI 1754 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLS 508 N V A+D L + R+ + + L R + +S Sbjct: 1755 NAEIVSGTIKTRQDAVDYLTWTYMFRRIVKNPSYYGLSDRSPASVTIFMS 1804 >UniRef50_B0EGZ1 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative n=2 Tax=Entamoeba RepID=B0EGZ1_ENTDI Length = 1804 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 101/544 (18%), Positives = 183/544 (33%), Gaps = 60/544 (11%) Query: 26 AFKQPTAVQPQTWHVAAR-SEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 + VQ + + A E+ LV APTG GKTL A L L + H + Sbjct: 175 NYTHLNYVQSKVYETAYNTGENMLVCAPTGCGKTLTALLCMLREV-------KMHQHDME 227 Query: 85 TSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLT 144 +I+YISP+KAL T++ + L +RV TGDT K Sbjct: 228 HLKIVYISPLKALATEMTTTFKKHL------------ICFKMRVEEVTGDTNIS---KAA 272 Query: 145 RNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALL 204 +++ TPE ++ + E + ++ +I+DEVH + RGA + + R ++ Sbjct: 273 IASTHVIVATPEKFDVLTRKQDAEFVNDIQLLIVDEVHLL-DEDRGAVIETIVARTLRMV 331 Query: 205 HT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSV 261 + + +GLSAT+ + DV F+ +P + + V + Sbjct: 332 ESQQRPIRVVGLSATLPNYQDVGEFIRA-KPENIFHFDMSYRA-------VPMSTKFIVL 383 Query: 262 ASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ 321 E+ V R + IVF ++R R + Sbjct: 384 PEDEKENKGQQFTQHATDLAYDEAEIVVKRGKQVIVFVHTRRETVLTAQRFIRRMKEKGA 443 Query: 322 RSPSIAVDAAHFE-STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVV 380 F ++ H+ + + R E A ++G L+ +V Sbjct: 444 TEYFTGNKGREFATRIKKLQGKDIKELLEMGIGVHNAGMFRSDRTFIEDAFRNGSLKVLV 503 Query: 381 ATSSLELGIDMGAVDLVIQVAT----------PLSVASGLQRIGRAGHQVGGVSKGLFFP 430 +T++L G+++ A ++I+ +S+ LQ GRAG Sbjct: 504 STATLAWGVNLPAHTVIIRGTEVFNSDKGCSDKISILDVLQMFGRAGRPQYDSEGAGIII 563 Query: 431 RTRRDLVDSAVIVECM---FAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 + L I+ M + + L N V T A+ Q Y ++ Sbjct: 564 TDKEGLKKYMAILGNMGKIKSTLMNGLADHLNAEIVSGTVTNLEEALQWFQYTYLYVCLK 623 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQL---LAVT 544 ++ + ++ + + + N ET + ++ VT Sbjct: 624 QSPG--GISYDDLNSLIGGTAKSL------EKIQMITINDETITFSPTLLGRIASHYYVT 675 Query: 545 SGGT 548 Sbjct: 676 VESM 679 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 97/562 (17%), Positives = 194/562 (34%), Gaps = 69/562 (12%) Query: 14 VFSPATRDWFLR-----AFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALD 67 P + F Q Q + + + ++ +V APTGSGKT+AA L L Sbjct: 985 RLHPLPTTALKQYQTFFNFHYFNPPQTQFFFICFNTNKNVIVGAPTGSGKTVAAELCMLK 1044 Query: 68 RLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLR 127 +FR+ +++YI+P+KAL + + + L + Sbjct: 1045 -IFRD----------TPDKKVVYIAPMKALVKEKMSDWKDKLITM------------GKN 1081 Query: 128 VGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVA 185 + TGD D+++TTPE +T + ++ V VI+DEVH + Sbjct: 1082 IVELTGDFTPD---SAAIAKADVILTTPEKWD-GITRLWTKKSYVQKVGLVILDEVHLL- 1136 Query: 186 GSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMR 242 G +RG + + R + L + L+ + + D+ ++G D+ ++R Sbjct: 1137 GEERGPVIEAIVTRTKQINKKLGIQTRICALTTAIANVDDMMNWIGVDKDSVFNFHSSLR 1196 Query: 243 HPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSR 302 + + G ++ R ++ I + ++F +SR Sbjct: 1197 PVPL------------IAHIDGFPTKAYCPRMATMNKPCYQAI-RLHSPDKPVMIFVSSR 1243 Query: 303 GLAEKLTARLNELYAARLQRSPSIAVD-AAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 L + + + E T T ++ ++ HH ++ Sbjct: 1244 RQTRLTAQDLVKFCFNDGNPQKFLHMPFEEMSEITKNITDGILKECLLYGIGMHHAGLND 1303 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSVASGLQ 411 R ITE+ KS +++ ++ T++L G+++ A ++I+ + + LQ Sbjct: 1304 HDREITEKLFKSNKIQILITTATLAWGVNLPAHLVIIKGTEYFDGKKHQFVDMPLTDVLQ 1363 Query: 412 RIGRAGH-QVGGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLENL-TPPHNPLDVLAQQT 468 +GRAG Q + +D + + E + N + T Sbjct: 1364 MMGRAGRPQYDNEGVAVILTYEPKKDFLRKFLFEPFPLESYFETVMADQLNAEIAVGNVT 1423 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 A+ L ++ R+ + + + + L + K + E Sbjct: 1424 NVKEAVKFLTFTYYFRRLLKNPNYYGYDGK--EQIGKFLVSKVKDALNELVSAKCIEMDE 1481 Query: 529 TGILTARPG-AQLLAVTSGGTI 549 + T G + S TI Sbjct: 1482 NDVETTTNGRLSTMYYISYRTI 1503 >UniRef50_A7AW09 Helicase, putative n=2 Tax=Eukaryota RepID=A7AW09_BABBO Length = 1798 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 121/597 (20%), Positives = 217/597 (36%), Gaps = 84/597 (14%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYAL 66 LP A ++ +Q ++ A ++ ++ L+ APTG GKT A L AL Sbjct: 152 IDSLPQWAQKAFA-----GIEKLNTIQSMVYNTAFKTSQNMLISAPTGCGKTNVALLCAL 206 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 ++ K ++++Y++P+KAL ++V L + L Sbjct: 207 Q------NFESYFNGGEKNTKVVYVAPMKALASEVTGKFSKSLVDL------------GL 248 Query: 127 RVGIRTGDT--PAQERSKLTRNPPDILITTPESLYLMLTSRAR-------ETLRGVETVI 177 RV TGDT P E + D+LITTPE L ++ + L V +I Sbjct: 249 RVREVTGDTQVPTSELGSI-----DVLITTPEKLDVITRNSYSTGTQSDDSFLTKVSCLI 303 Query: 178 IDEVHAVAGSKRGAHLALSLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRPVT 234 IDEVH + + RG L + R+ L+ ++ + +G+SAT+ + DVA FL Sbjct: 304 IDEVHLLNDT-RGIVLETVVARILRLIESTQETRRIVGISATLPNWKDVAEFLRVAPEHA 362 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 P RH + V D++ +++ I+ + + Sbjct: 363 YHFGPEYRHVPLSQVFYGVKGKDITG---------------TMYEICFDHIIQTLENGKQ 407 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDA----AHFESTSGATSNRVQSSDVF 350 I+F +SR +L E+ + + + + V+ + Sbjct: 408 CIIFVHSRNETSMTANKLIEMIQESPSHQKLFQPNRDIYQRFHKQLKKSKHDNVERFAEY 467 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV---- 406 HH + + R + E K G ++ +V+TS+L G+++ A ++I+ + Sbjct: 468 CMSIHHAGMVRRDRDVVENMFKEGLIKVLVSTSTLAWGVNLPANCVIIKGTFIGGLGVDR 527 Query: 407 ----ASGLQRIGRAGH-QVGGVSKGLFFPRTR--RDLVD---SAVIVECMFAGRLENLTP 456 Q +GRAG Q G+ + D + + +E LEN Sbjct: 528 NINYLELTQIMGRAGRPQFDTSGTGVLITEHKNLNDYIKMQTEQLPIESHLHRHLENA-- 585 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDF 516 N VL A A+ L+ Y R+R+ A + + L Sbjct: 586 -LNAEIVLGTVVDEADAVTWLRYTFLYVRMRKNALKYGIKSSNDGEIFNQLHKIVRDAAI 644 Query: 517 SAFRPKLV-WNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRR 570 + R KL+ ++ +G + ++ TI ++V L Sbjct: 645 NLDRSKLIRYHEPSGEFASTDLGRIAARYYVDYETI---YNFAVSLNAEISAPTQPV 698 Score = 365 bits (938), Expect = 7e-99, Method: Composition-based stats. Identities = 95/507 (18%), Positives = 182/507 (35%), Gaps = 73/507 (14%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFL 63 P P+ L D F + + +Q Q ++ LV APTGSGKT+ A L Sbjct: 1028 PMPTKALCDKFD------YQHKY--FNPLQTQMLSYCLYHDDNLLVGAPTGSGKTVVAEL 1079 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + +++YI+P+KAL + ++ Sbjct: 1080 AMFRLWRTQVC-----------KKVVYIAPLKALAYERLKDWNKKFGMFK---------- 1118 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 +V TGD+ + + D+++TTPE + + R+ +R V ++IDEVH Sbjct: 1119 ---KVVEVTGDSRTSVKEIV---NSDVIVTTPEKWDGISRHWKTRKYVRSVGLIVIDEVH 1172 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 + S RGA L + RL + ++ + + LS + + ++A ++ P Sbjct: 1173 LLGES-RGAVLEAIVSRLCFISKFTQSNTRLVCLSTALANPGEIADWISVSSTKVFNFSP 1231 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 A+R + + G ++ R S+ + I+ +VF Sbjct: 1232 AVRPVKCHL------------YIDGFPLKAYCPRMNSMNRPAFSTIMR-HDISAPVLVFV 1278 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 +SR L + R +I + A F + HH + Sbjct: 1279 SSRRQTRTTARDFVSLLQVKSLRWTNIDISARPF------IDENLNVFVEHGIGIHHAGL 1332 Query: 360 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASG 409 R E+ GE++ ++AT++L G+++ A ++++ SV Sbjct: 1333 HDSDRIRIEEMYLKGEIKVLIATATLAWGVNLPAKIVIVKGTEYYDGKTKKYADYSVTDI 1392 Query: 410 LQRIGRAGHQ-VGGVSKGLFFPRTRRDLVDSAVIVECM--FAGRLENLTPPHNPLDVLAQ 466 LQ +GRAG + + + +R+ A + + E L N Sbjct: 1393 LQMVGRAGRRVFDKEAYAYVYTESRKVDFYKAFMFSPFPAESSFHERLLDSMNSEIASGT 1452 Query: 467 QTVAAAAMDALQVDEWYSRVRRAAPWK 493 A + L+ ++ R+++ + Sbjct: 1453 IANKAQGLQYLKNTFFFKRLKKNPQYY 1479 >UniRef50_B3T467 Putative DEAD/DEAH box helicase n=2 Tax=environmental samples RepID=B3T467_9ARCH Length = 711 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 121/705 (17%), Positives = 227/705 (32%), Gaps = 91/705 (12%) Query: 8 SSLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKTLAAFLYA 65 LP P ++ + + + Q ++ LV APT SGKTL A L Sbjct: 3 IDELP--LDPNIINFLKSQGYTELYPPQEDAIKAGVLDGKNILVSAPTASGKTLIAILAI 60 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + + K+ ++I+Y+SP+KAL + + + + Sbjct: 61 IQHI------------KKHKTKIVYLSPLKALAAEKFSEFKKL---------ETVKLDRK 99 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVA 185 ++V I TGD + + T DILI T E + ++ + + + VI DE+H V Sbjct: 100 IKVAISTGDFDSDD----TLKNSDILILTNEKMDSLM-RFSPSWIDDIGLVISDEIHLVG 154 Query: 186 GSKRGAHLALSLERLDA-LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHP 244 RG L + L R L +Q I LSAT+ + ++A +L + P + Sbjct: 155 DEGRGPTLEMILTRFKLGLAGNKSQIIALSATITNYDELAEWLECKPVESKWRPVPLSEA 214 Query: 245 QIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGL 304 + + S+ +D V +++F +R Sbjct: 215 VYDDFTVKNQERESYKI-----------NFDSVGLPSIGLGIDSVKNGGQSLLFAMTRPS 263 Query: 305 AEKLT----ARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVS 360 + KL + + ++ + ++ S HH ++ Sbjct: 264 SVKLAMDSGKYIEKKLGSKELAELGKISKKILSNNEQTELIKKLASVVKQGVAFHHAGLN 323 Query: 361 KEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVASGL 410 + R I E ++G+++ + AT +L G+++ A +VI +P+SV Sbjct: 324 QNCREIIETEFRNGKIKLLSATPTLAAGVNLPARRVVISSILRYNSKFGGNSPISVLEYK 383 Query: 411 QRIGRAGH-QVGGVSKGLFFPRT--RRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQ 467 Q GRAG Q + + + + DL++ V G E + L Sbjct: 384 QLCGRAGRPQYDKEGESIIIAKQIPQDDLLEHYV------DGEPEPIESKITEPSSLRIH 437 Query: 468 TVAAAAMDA-LQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWN 526 ++ + D Y + + + L+ F + N Sbjct: 438 LLSLVVTSPTITEDRIYKFFSQTLGGMQVEDETIELNLENAKSFLQDEKF-------IVN 490 Query: 527 RETGILTARPG--AQLLAV--TSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMV-YE 581 +E G + + G L + + + Y V + +E +E Sbjct: 491 KEGGYIATKFGQMVSRLYIDPMTARDFRNAIEYDVSKGRKHTFGFLHLITNCNEFFPKFE 550 Query: 582 SR-----VNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFW--RGEGNGRPAELGEM 634 R D++ +I+ I + W G +L Sbjct: 551 LRNKDEERADVVIENNKQTKIKHIEMQDCTRSLLAMDL-----WINEGTEIDLSDQLNIE 605 Query: 635 IGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIE-EQRNATGI 678 GD ++ + ++ I L QR GI Sbjct: 606 SGDIHRMVETANWLVYSLRELSRLLGRADLISELDALRQRIRYGI 650 >UniRef50_Q0UNS2 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UNS2_PHANO Length = 1320 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 97/572 (16%), Positives = 195/572 (34%), Gaps = 52/572 (9%) Query: 31 TAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRIL 89 + + + ++ ++ +PTGSGKT+ L + +++ Sbjct: 56 WSHPSKCFDTVFGSDDNFVLASPTGSGKTVILELAICRAVATNATGQY---------KVV 106 Query: 90 YISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPD 149 Y +P KAL ++ QR+ I L+ TGD+ A + + + Sbjct: 107 YQAPTKALCSERQRDWAAKFTPI------------GLKCAELTGDSDASDVRNV--QSAN 152 Query: 150 ILITTPESLYLMLTS--RARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTS 207 I+ITTPE + + +R ++ +IDEVH + RGA L + R+ ++ T Sbjct: 153 IIITTPEKWDSITRKWKDHEKLMRLIKVFLIDEVHILKEG-RGAVLETVVSRMKSI-GTD 210 Query: 208 AQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGE 267 + + LSATV + DVA +LG V P + PV V S Sbjct: 211 VRFVALSATVPNLGDVATWLGKSSAEPHVQAPHEK--FGEDFRPVKLRKHVCGYVSNISN 268 Query: 268 DSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIA 327 D + I ++ + + ++F +R + + +R Sbjct: 269 DFGFEK---ILDAKLPEVIAKYSEGKPIMIFCTTRASCLNTAKLIVRWWMSRPGNDRKWN 325 Query: 328 VDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL 387 + + ++ + HH + + R E+ E+ + TS+L + Sbjct: 326 PPSKQI----TLVNKDLRDTVASGVAFHHAGLDLDDRMQVEKGFLGHEIGVICCTSTLAV 381 Query: 388 GIDMGAVDLVIQVAT--------PLSVASGLQRIGRAGH-QVGGVSKGLFFPRTRRDL-V 437 G+++ ++I+ S +Q +GRAG Q + + R+ + Sbjct: 382 GVNLPCHLVIIKNTVTYTDEGLQEYSDLEMMQMLGRAGRPQFDDTAVAVIMTRSVKAQRY 441 Query: 438 DSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLP 496 ++ V + + +L NL N L +A L+ Y R+++ L Sbjct: 442 ENMVTGKELLESKLHLNLIDHMNAEIGLGAIRDLDSARKWLKGTFLYVRLQQNPSHYKLE 501 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG-AQLLAVTSGGTIPDRGMY 555 L+ D + R + + + + G A T+ ++ Sbjct: 502 GARAGQNLEEQVDDICFRDIALLRENTLVSGDENFRSTDYGHAMARYYVHFETM---KVF 558 Query: 556 SVLLPEGEEKAGSRRVGELDEEMVYESRVNDI 587 + + + + E R + Sbjct: 559 MGIQSKATPSDILSAIAQASEFSKLRFRPGEK 590 >UniRef50_Q4MYU4 ATP-dependent RNA helicase, putative n=3 Tax=Theileria RepID=Q4MYU4_THEPA Length = 2249 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 109/598 (18%), Positives = 200/598 (33%), Gaps = 97/598 (16%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 P + VQ + A + E+ L+ APTGSGKT A L L+ + Sbjct: 475 PKWSQLAFKGVDTLNPVQSTVFETAFNTSENMLICAPTGSGKTNVAILTILNVFKKHLTP 534 Query: 76 DTREAHKR----------------------KTSRILYISPIKALGTDVQRNLQIPLKGIA 113 + K ++YISP+K+L + ++ + K Sbjct: 535 KDQSLKTDSRVAGESNDSLDGLELSDCYFDKEFTVIYISPMKSLVLEQTQSFNLRFKD-- 592 Query: 114 DERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV 173 + V TG+ + I++TTPE ++ L V Sbjct: 593 ----------YGISVHELTGEMSMS---RTQIQNTQIIVTTPEKWDVVTRK--EGMLERV 637 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLERL---DALLHTSAQRIGLSATVRSASDVAAFLGGD 230 E VIIDEVH + KRG+ + + R D + + +GLSAT+ + D+A FL D Sbjct: 638 ELVIIDEVHLLHD-KRGSVIESLVTRTFMHDKVTGLKTRIVGLSATLPNYGDIAKFLRVD 696 Query: 231 RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL 290 + P + G E + ++ + Sbjct: 697 E--GLFYFGNHYRPV-----------PLEQHYIGIKEKKALKQYNITNELTYEHVIKNIG 743 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSI---AVDAAHFESTSGATSNRVQSS 347 + +VF +SR + + + + + + I A + ++ ++ Sbjct: 744 E-KQVLVFVHSRKETYRTSKMILDKIVSEDKLELFIKDVASREILTSESEHIKNSNLKEL 802 Query: 348 DVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI---QVATP- 403 F HH + + R + E L+ +V+T++L G+++ A ++I Q+ P Sbjct: 803 LPFGIGIHHAGLVRSDRKLVEDLFSDKHLQLLVSTATLSWGVNLPAGVVIIKGTQIYVPE 862 Query: 404 ------LSVASGLQRIGRAGH-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRL 451 L S Q +GRAG Q KG+ + L + + +E +L Sbjct: 863 QGSWDELCPLSVQQMMGRAGRPQFDTFGKGIIITANEKLQYYLSLNNQQLPIESQLIAKL 922 Query: 452 ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDL---------------P 496 + N VL T A++ ++ Y RV++ Sbjct: 923 PEV---LNSEIVLRNITNLQQALEWIKTTYLYVRVKKNPLLYGFETEDEELDEDDNMEGE 979 Query: 497 RRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGM 554 + +DM + + V + G++ + ++ T G I Sbjct: 980 EDKPEPKIDM--EKLENYLLVLINSSFVHLEKNGLIKYERKSGMVTSTGLGVIASNYY 1035 Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats. Identities = 79/611 (12%), Positives = 177/611 (28%), Gaps = 130/611 (21%) Query: 17 PATRDWFLRAFK--QPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREG 73 +++R FK +Q Q + E+ L+ AP GSG+ A L L L + Sbjct: 1413 ENLLKYYIRNFKYNHFNNIQTQVFSSFYCTDENVLLSAPYGSGRFTCAELAVLRTLLQ-- 1470 Query: 74 GEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTG 133 ++ + I+ + P + L + L + V TG Sbjct: 1471 --------LKEKATIVVVVPFENLLRKRFKRLVSRFGEV-------------CSVAELTG 1509 Query: 134 DTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHL 193 D I +TT ++ +L + ++ V ++ + V ++ G + Sbjct: 1510 DFKQDF---QVVLSNTITVTTAKNYNHLLNRYKNKLIQNVNLLVFEGVEFLSDELYGVSI 1566 Query: 194 ALSLERLDA------------------------LLHTSAQRIGLSATVRSASDVAAFLGG 229 L L +L +++ ++ + +++++ + DV +LG Sbjct: 1567 ELCLTQLRYYTTLYNSVELKREDSGNTLNGNSVMMNNKSRLVVITSSLYNNLDVCNWLGI 1626 Query: 230 DRPVTVVNPPAMRHPQIRIVVPVANMDD----------VSSVASGTGEDSHAGREGSIWP 279 + N R I + + + D + +++ Sbjct: 1627 NTYYNFNNFV--RQVPITVNLYTFDQIDQVTRQNSMISTINKFVTNKTKVLIVTTNTVYT 1684 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 + ILD L + + + + + + S + Sbjct: 1685 KHLSLILDLHLNGPQ-------------------QNHVNHNEHNSHLDKASGSAVSKLFS 1725 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQAL-KSGELRCVVATSSLELGIDMGAVDLVI 398 + S+++ + E K R ++ TS + +++ +++ Sbjct: 1726 KYKLFNELKSVLYAY--EGFSEDEVELVESLFAKDPRYRVLIVTSQVLWNLNIKCPYVIV 1783 Query: 399 QV------ATPLSVASGLQRIGRAGHQVGGVSKGLFFPR----------TRRDLVDSAVI 442 PL Q + L + ++ + Sbjct: 1784 ADVNASYTNRPLVQNYYTQ---------YDLQYILSLANPTSNYDKSDDHEDEDLECIFL 1834 Query: 443 VEC--------------MFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 +E + LE +L N V A+D L +Y R+ Sbjct: 1835 LENNKKEEVKRMLYDSVVVESNLELSLEEALNNEIVRGLIKTPQEAIDWLTWTFYYRRLS 1894 Query: 488 RAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGG 547 + + L + LS + ++ L+ + + +++AV + G Sbjct: 1895 KNPNYYSLIATTPQHLSEHLSELIENTIYNLKNMGLIQTSQDLPDSEEEIEEIMAV-NLG 1953 Query: 548 TIPDRGMYSVL 558 I YSV Sbjct: 1954 HIAS--FYSVR 1962 >UniRef50_Q235I9 Type III restriction enzyme, res subunit family protein n=2 Tax=Eukaryota RepID=Q235I9_TETTH Length = 2678 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 108/562 (19%), Positives = 205/562 (36%), Gaps = 52/562 (9%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDRL 69 PD A + + VQ + + A +++ + L+ APTG+GKT A + L + Sbjct: 484 FPDWAREAF-----GSIQSLNVVQSKVYKTAFQTDDNILICAPTGAGKTNIALMTVLREI 538 Query: 70 FREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVG 129 + T++ T +I+YISP+KAL +++ LK + N++ Sbjct: 539 EKHINPQTKQLI-DPTFKIIYISPMKALASEIVDKFSGMLKHM------------NVKCK 585 Query: 130 IRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKR 189 TGD ++ I++TTPE + + E + +IIDE+H + +R Sbjct: 586 ELTGDMQLTKKE---IEETQIIVTTPEKWDVFTRKK-NEVAETLRLLIIDEIHLLND-ER 640 Query: 190 GAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 G L + R + S + +GLSAT+ + DVA+FL + +V A P Sbjct: 641 GPVLECLVSRTLQNIERQQKSVRMLGLSATLPNYLDVASFLHVKKE-SVFFFDATYRP-- 697 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 VP+ +G + + + + ++F +SR Sbjct: 698 ---VPLMQRYIGVREPKQSGFKVKRKKIDIYNDLSYSISKGILEHKKQVLIFVHSRKETI 754 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 + + + V++ S +Q + HH + ++ R I Sbjct: 755 VTAQYVLKKAQDCGELHLFKPVNS-DKHSLPKIKDKELQKLAPWGLGFHHAGMLRKDRNI 813 Query: 367 TEQALKSGELRCVVATSSLELGIDMGAVDLVIQ----------VATPLSVASGLQRIGRA 416 E+ G++R +VAT++L G+++ A ++I+ LSV Q GRA Sbjct: 814 VEKMFNDGQIRILVATATLAWGVNLPAYGVIIKGTDVYDPSRGGTQDLSVLDIQQMFGRA 873 Query: 417 GH-QVGGVSKGLFFP--RTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAA 473 G Q + V + + +L N L A Sbjct: 874 GRPQFDNNGEATLMTDINKLNSFVAQLNNASFIESRFTAHLKEALNAEIALGNIATLKEA 933 Query: 474 MDALQVDEWYSRVRRAAPWKDLPRRVFDAT-LDM-LSGRYPSGDFSAFRPKLV-WNRETG 530 D + + R+RR ++M ++ + + +L+ W+R+ Sbjct: 934 FDWVNYTFYSIRLRRNPMGYGCKIAQNKELSIEMHITETIENALEHLDKLRLIRWDRQNN 993 Query: 531 ILTARPGAQL--LAVTSGGTIP 550 L + ++ + T+ Sbjct: 994 YLASTELGRITSHYYINCDTMN 1015 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 103/560 (18%), Positives = 191/560 (34%), Gaps = 66/560 (11%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAF 62 +P P S L + K Q Q +H ++ + L+ +PTGSGKT+ + Sbjct: 1379 HPLPISALNNSDFEQI-----YKMKYFNPNQTQIFHAMYNTDHNILIGSPTGSGKTIMSE 1433 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L AL ++K ++Y++P+KA+ + + ++ I Sbjct: 1434 LSALR--------VFNLYPEKKVMLVIYVAPLKAIAKERLADWEVRFGKI---------- 1475 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLY-LMLTSRARETLRGVETVIIDEV 181 V TGD + L D+LITTPE + R ++ VI DE+ Sbjct: 1476 --GKTVLELTGDYTPDLDALL---KADVLITTPEKWDGISRNWHNRNYVQKTGLVIFDEI 1530 Query: 182 HAVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 H + G RG L + + R++ + + +GLS + + +DVA + G + Sbjct: 1531 HLL-GQDRGPVLEVIVSRMNMISSKTGHKVRMVGLSTAMANGTDVADWFGVPKNYFFNFR 1589 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 P +R ++I G ++ R + I + + +VF Sbjct: 1590 PHVRPVPLKI------------YFDGFSAKAYCPRMAEMNKPAFQQI-RKFGEKKPVLVF 1636 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGS 358 +SR L + S V E + + HH Sbjct: 1637 VSSRRQTRLTALDLIAHAMHDIGGGQSPFVMCQEDELQIYLEN----GYFKYQLGMHHAG 1692 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVAS 408 + ++ R I E+ + +++ +VATS+L G+++ A ++I+ + V Sbjct: 1693 LDQDDRKIVEELFLNHKVQILVATSTLAWGVNLPARLVIIKGTEYFDPKTKRYVDMPVTD 1752 Query: 409 GLQRIGRAGH-QVGGVSKGLFFPRTRRDLVDSAVIVECM--FAGRLENLTPPHNPLDVLA 465 LQ IGRAG Q F + + + + + + N Sbjct: 1753 ILQMIGRAGRPQFDDKGIACVFVEQSKKNFYRKYLNDPFPIESSLISQIHDHFNAEIASG 1812 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPS--GDFSAFRPKL 523 T MD + ++ R+ + + +L L + Sbjct: 1813 TITNKQQCMDWITWTYFFRRMLKNPTYYNLENAETKQVKKFLIELVDECMNRLAEHGCIT 1872 Query: 524 VWNRETGILTARPGAQLLAV 543 + + +T QL A Sbjct: 1873 IDDELKFNVTPTFLGQLAAF 1892 >UniRef50_A2PYH4 Probable ATP-dependent DNA helicase HFM1 n=9 Tax=Euteleostomi RepID=HFM1_HUMAN Length = 1435 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 104/571 (18%), Positives = 198/571 (34%), Gaps = 69/571 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYAL 66 + +P F ++ F +Q + + + + ++ APTGSGKT+ L Sbjct: 264 VTEIPAKFRSIFKE-----FPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAIT 318 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 L +I+Y++PIKAL + + + I L Sbjct: 319 RLLME-------VPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPI------------GL 359 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAV 184 TGDT + ++ I++TTPE M T + R+ ++ V +IDEVH V Sbjct: 360 NCKELTGDTVMDDLFEI--QHAHIIMTTPEKWDSM-TRKWRDNSLVQLVRLFLIDEVHIV 416 Query: 185 AGSKRGAHLALSLERLDALLHT-----------SAQRIGLSATVRSASDVAAFL-GGDRP 232 RG L + + R+ + + + +SAT+ +A D+A +L G+RP Sbjct: 417 KDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSATIPNAEDIAEWLSDGERP 476 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + PV V + + + Y ++ Sbjct: 477 AVCLKMDESHR-------PVKLQKVVLGFPCSSNQTEF--KFDLTLNYKIASVIQMYSDQ 527 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 + T+VF +R ++ + L + ++ + ++++ A Sbjct: 528 KPTLVFCATRKGVQQAASVL----VKDAKFIMTVEQKQRLQKYAYSVRDSKLRDILKDGA 583 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PL 404 HH + R + E A G+L + TS+L +G+++ A +VI+ Sbjct: 584 AYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGLFEEY 643 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPR--TRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 S LQ IGRAG Q + + R TR + + + + +L N Sbjct: 644 SETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSLHRHLIEHLNAE 703 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 VL T A++ ++ Y R + + ++ + + Sbjct: 704 IVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSS 763 Query: 522 K-LVWNRETGILTARPGAQLL--AVTSGGTI 549 L+ E +L+ + T+ Sbjct: 764 LDLIKMDEGVNFKPTEAGRLMAWYYITFETV 794 >UniRef50_D2KTB5 Helicase (Fragment) n=12 Tax=Euteleostomi RepID=D2KTB5_HUMAN Length = 906 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 104/571 (18%), Positives = 199/571 (34%), Gaps = 69/571 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYAL 66 + +P F ++ F +Q + + + + ++ APTGSGKT+ L Sbjct: 278 VTEIPAKFRSIFKE-----FPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAIT 332 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 L +I+Y++PIKAL + + + I L Sbjct: 333 RLLME-------VPLPWLNIKIVYMAPIKALCSQRFDDWKEKFGPI------------GL 373 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAV 184 TGDT + ++ I++TTPE M T + R+ ++ V ++IDEVH V Sbjct: 374 NCKELTGDTVMDDLFEI--QHAHIIMTTPEKWDSM-TRKWRDNSLVQLVRLLLIDEVHIV 430 Query: 185 AGSKRGAHLALSLERLDALLHT-----------SAQRIGLSATVRSASDVAAFL-GGDRP 232 RG L + + R+ + + + +SAT+ +A D+A +L G+RP Sbjct: 431 KDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSATIPNAEDIAEWLSDGERP 490 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + PV V + + + Y ++ Sbjct: 491 AVCLKMDESHR-------PVKLQKVVLGFPCSSNQTEF--KFDLTLNYKIASVIQMYSDQ 541 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 + T+VF +R ++ + L + ++ + ++++ A Sbjct: 542 KPTLVFCATRKGVQQAASVL----VKDAKFIMTVEQKQRLQKYAYSVRDSKLRDILKDGA 597 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PL 404 HH + R + E A G+L + TS+L +G+++ A +VI+ Sbjct: 598 AYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGLFEEY 657 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPR--TRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 S LQ IGRAG Q + + R TR + + + + +L N Sbjct: 658 SETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLAYRDTVESSLHRHLIEHLNAE 717 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 VL T A++ ++ Y R + + ++ + + Sbjct: 718 IVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSS 777 Query: 522 K-LVWNRETGILTARPGAQLL--AVTSGGTI 549 L+ E +L+ + T+ Sbjct: 778 LDLIKMDEGVNFKPTEAGRLMAWYYITFETV 808 >UniRef50_Q4T4J7 Chromosome undetermined SCAF9604, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4T4J7_TETNG Length = 1560 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 97/544 (17%), Positives = 181/544 (33%), Gaps = 71/544 (13%) Query: 17 PATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFREGGE 75 P FK +Q + + + + E+ L+ APTG+GKT A + L + + Sbjct: 409 PKYAQAAFEGFKTLNRIQSKLFKTSMDTDENLLICAPTGAGKTNVALMAMLREIGKHINM 468 Query: 76 DTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDT 135 D +I+YI+P+++L ++ L TGD Sbjct: 469 DGTINV--DDFKIIYIAPMRSLAQEMV----------------------GLS--ELTGD- 501 Query: 136 PAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHAVAGSKRGAHLA 194 + K N I++ TPE ++ R + V +IIDE+H + RG L Sbjct: 502 --HQLCKEEINATQIIVCTPEKWDIITRKGGERTYTQLVRLIIIDEIHLLHDD-RGPVLE 558 Query: 195 LSLERLDA---LLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 + R L + +GLSAT+ + DVA L D + P Sbjct: 559 SLVARTIRNVELTQEDVRLLGLSATLPNYEDVATCLRVDPAKGLFYFDNSFRPV------ 612 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + G E R + + I++ +VF +SR K Sbjct: 613 -----PLEQTYVGITEKKAIKRFQIMNEIVYEKIME-HAGKNQVLVFVHSRKETGKTARA 666 Query: 312 LNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHHGSVSKEQRAIT 367 + ++ + + +A E + ++ + HH +++ R + Sbjct: 667 IRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLV 726 Query: 368 EQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV----------ASGLQRIGRAG 417 E ++ +V+T++L G+++ A ++I+ S LQ +GRAG Sbjct: 727 EDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAG 786 Query: 418 H-QVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAA 471 Q +G+ L++ + +E + L N VL + Sbjct: 787 RPQYDTKGEGILITSHAELQYYLSLLNQQLPIESQM---VSKLPDMLNAEIVLGNVQNSK 843 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 +Y + L + +++ S +F + E Sbjct: 844 VTDLGRIASHFYVTHDSIQTYNQLLKPTLSE-IELFRVFSLSSEFRNITVREEEKLELQK 902 Query: 532 LTAR 535 L R Sbjct: 903 LLER 906 Score = 96.5 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 27/150 (18%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFL 63 P P + L + A + F +Q Q ++ S+ + V AP GSGKT+ A Sbjct: 1106 PLPVTALRNS---AFEAVYQNKFPFFNPIQTQVFNAVYNSDDNVFVGAPNGSGKTICAEF 1162 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 L L R +YI+P++AL V + + I Sbjct: 1163 AILRMLLHNA-----------EGRCIYITPMEALAEQVFVDWHQKFQDI----------- 1200 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILIT 153 +N +V + TG+T + L + +++ Sbjct: 1201 LNKKVVLLTGETS-TDLKLLGKGAVQVVVA 1229 Score = 72.7 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 15/123 (12%) Query: 369 QALKSGELRCVVATSSLELGIDMGAVDLV----------IQVATPLSVASGLQRIGRAGH 418 + L G ++ VVA+ SL GI + A ++ I + LQ +GRA Sbjct: 1217 KLLGKGAVQVVVASRSLCWGISISAHLVIVMDTQYYNGKIHSYVDYPIYDILQMVGRANR 1276 Query: 419 Q-VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 + + + + L + + + + + N L L L Sbjct: 1277 PMQDDEGRCVIMCQGSKKL--AQKVPHKLNNPKFNDPHVKTNLL--LQAHLSRMQLSAEL 1332 Query: 478 QVD 480 Q D Sbjct: 1333 QSD 1335 >UniRef50_UPI0001758681 PREDICTED: similar to HFM1 protein n=1 Tax=Tribolium castaneum RepID=UPI0001758681 Length = 1324 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 110/611 (18%), Positives = 211/611 (34%), Gaps = 80/611 (13%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLY 64 P +P + ++ +Q + + +V APTGSGKT L Sbjct: 37 RPVEEIPQPYQEVFAEYLC-----FNPIQSKLIDDAFYTDQSIVVSAPTGSGKTAIFELA 91 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 + L + + +I+YI P+KAL + + + Sbjct: 92 IVRLLI--------ASESSQKFKIVYICPMKALCEERLVDWNKKF------------SNF 131 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGV---ETVIIDEV 181 + TGD+ + L +++ITTPE LT + RE L V + +IDEV Sbjct: 132 GINPISVTGDSENIDFQSL--RNYNLIITTPEKWDC-LTRKWRENLDLVEIVKLFMIDEV 188 Query: 182 HAVAGSKRGAHLALSLERLDAL--------LHTSAQRIGLSATVRSASDVAAFLGGDRPV 233 H + RG+ L + R+ + L+ + I +SAT+ + D+A + + Sbjct: 189 HLLNEECRGSTLETIVCRMKTIEESVKTHDLNHKIRFIAVSATIANIEDIAEW---NNAK 245 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 + R ++ +V + S + Y ++ + + Sbjct: 246 SFKFSDDFRPVRLNKIV----------LGYSEPPKSTPFKFDLALNYKLHSLMMQYSHGK 295 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 T++F ++R + E + + L+ E S + + + + + Sbjct: 296 PTLIFCSTRKIVEMTARHIVQHLTIGLKPEQ----KQRIVEVASTISDAKAKETLIHGVG 351 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA--------TPLS 405 HH + E R E ++ EL +V TS+L +G+++ A ++I+ + Sbjct: 352 YHHAGMLPETRRAIENLFRNNELPVLVTTSTLAMGVNLPAHLVIIKSTKCYTSGGFRDYT 411 Query: 406 VASGLQRIGRAGH-QVGGVSKGLFFPRTRR-DLVDSAV----IVECMFAGRLENLTPPHN 459 + LQ IGRAG Q + L +R + + + +E +L N Sbjct: 412 ETALLQMIGRAGRPQYDTEATALILTTSREKEKFEKMIGGLEPIESNLHR---HLIEHLN 468 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPR-RVFDATLDMLSGRYPSGDFSA 518 VL T A+ L Y R ++ LP A L Sbjct: 469 AEVVLQTITGLEVALRWLTSTFLYIRAKKNPRHYGLPPSSDPAAVDRRLLEMCQIELNKL 528 Query: 519 FRPKLVWNRETGILTARPGAQLL--AVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDE 576 + ++ + +L A P + + T+ +++ + + + + E Sbjct: 529 IKAGMLTIDQDVLLKATPVGAAMAKYYLAFETM---KLFTQINGGEILQQILHLISKCSE 585 Query: 577 EMVYESRVNDI 587 RVND Sbjct: 586 FSEMYLRVNDK 596 >UniRef50_Q4UHC2 DEAD-box helicase, putative n=2 Tax=Theileria RepID=Q4UHC2_THEAN Length = 1925 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 114/566 (20%), Positives = 210/566 (37%), Gaps = 75/566 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P S LP+ + F+ ++ +Q + ++ A + ++ L+ APTG GKT L Sbjct: 252 PISTLPEW----VQRAFI-GVEKLNLIQSKVFNSAFNTQQNLLISAPTGCGKTNVGLLCL 306 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L +K +++YISP+KAL +++ L Sbjct: 307 LQ------NYREYFEQGKKCGKVIYISPMKALASEIVEKYSKSLAH------------SG 348 Query: 126 LRVGIRTGD--TPAQERSKLTRNPPDILITTPESLYLMLTSRAR-------ETLRGVETV 176 L V TGD P E ++ DIL+TTPE ++ + L V + Sbjct: 349 LVVREVTGDFQVPKSELEEI-----DILVTTPEKCDVVTRNSFSTATQSDDSFLTRVNLI 403 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLH---TSAQRIGLSATVRSASDVAAFLGGDRPV 233 I DE+H + +RG + R L+ + + +G+SAT+ + D+A FL Sbjct: 404 IFDEIHLLND-ERGPVIETIAARFFRLIEWTQVTRRVVGMSATLPNYEDIATFLRVPPEH 462 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 T RH ++ + DD+ + ++ I++ + + Sbjct: 463 TYYFGREYRHVPLQQIFYGIKNDDIY--------------KNNMLMICFDHIVETLESGK 508 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-STSGATSNRVQSSDVFIA 352 +VF +SR +R+ EL + + S N ++ + Sbjct: 509 QCMVFVHSRNETFTTASRIVELVNKSEKSELFEPDLSQVKRFSAQLMRRNNLKLLSDYSI 568 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSV------ 406 HH +SK R + E+ KSG ++ +V TS+L G+++ A ++I+ V Sbjct: 569 SIHHAGLSKSDRDLVEEMFKSGLIKVLVCTSTLAWGVNLPAHSVIIKGTFIGGVGVDRNI 628 Query: 407 --ASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVD------SAVIVECMFAGRLENLTPPH 458 Q +GRAG V ++L + V +E LEN Sbjct: 629 NNLELNQIMGRAGRPQFDVEGKGILLTDHKNLYNYVRMQTERVPIESQLHMHLENF---L 685 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSA 518 N + A+ LQ + R+ + + + D L + + Sbjct: 686 NAEIAIGSINNDTDALLWLQYTYLFVRMVKNPLFYGINGDDDDTLLKYRHEIIKNAAKNL 745 Query: 519 FRPKLV-WNRETGILTARPGAQLLAV 543 + KL+ ++ +TG ++ ++ A Sbjct: 746 NKSKLIRYSSKTGDFSSTDLGRIAAR 771 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 103/519 (19%), Positives = 188/519 (36%), Gaps = 89/519 (17%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAF 62 NP P+S+L + + F +Q Q +H A R+ E +V APTGSGKTL A Sbjct: 1113 NPLPTSVL--------NQYNVYKFPYFNPLQTQVFHKAFRTDESLVVAAPTGSGKTLVAE 1164 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L K +YI+P+KAL + ++ L Sbjct: 1165 LGLFR-----------LFDKHPDKIAVYIAPLKALAHERFKDWCKKLHFK---------- 1203 Query: 123 EVNLRVGIRTGDTPAQ-------ERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGV 173 ++ TGDT + + + + DI+ITTPE ++ R + V Sbjct: 1204 ----KILQLTGDTSSNNLDNQLYKFERDELDRYDIVITTPEKWD-GISRHWRRKKLVTKV 1258 Query: 174 ETVIIDEVHAVAGSKRGAHLALSLER---LDALLHTSAQRIGLSATVRSASDVAAFLGGD 230 +I+DE+H + S RGA + + R ++ + I LS ++ + ++++ ++G Sbjct: 1259 ALIILDELHLLGES-RGAIIESIISRQYTINHSTGAQVRYICLSTSLSNLNEISEWIGI- 1316 Query: 231 RPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVL 290 P + P + G ++ R S+ I+ Sbjct: 1317 -------------PNVYNFSPAVRPVKCNLYIDGFSIKAYCPRMNSMNKPCFDTIIK-HD 1362 Query: 291 RHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVF 350 + ++F +SR L L + ++ + + Sbjct: 1363 HSSNVLIFVSSRRQTRMTAQDLVGLL-------QFHNISFSNSCDNYFFDDEWLNTFVPH 1415 Query: 351 IARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV---------- 400 HH +S + R + + +G+L+ ++ATS+L G+++ A ++I+ Sbjct: 1416 GIGIHHAGLSTKDRELVQDLFLNGKLKVLIATSTLAWGVNLPAKIVIIKGTEFYDGRVKK 1475 Query: 401 ATPLSVASGLQRIGRAGHQ-VGGVSKGLFFPRTRRDLVDSAVI-----VECMFAGRLENL 454 S +Q +GRAG G + F TR+ A + E F LE + Sbjct: 1476 YIDYSATDIIQMVGRAGRNIYDGEAYAYVFTETRKVGFYKAFMFTPFPTESFF---LEKI 1532 Query: 455 TPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWK 493 N T +A++ L Y R++ + Sbjct: 1533 NDCLNSEIATGSVTTKKSALEYLSRTFLYKRLKSNPKYY 1571 >UniRef50_C6IVI9 DEAD/DEAH box helicase domain-containing protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVI9_9BACL Length = 746 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 162/780 (20%), Positives = 275/780 (35%), Gaps = 122/780 (15%) Query: 14 VFSPATRDW-FLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDRLFR 71 +P +++ + + + Q + V + H L+ + T SGKT AAF AL L+ Sbjct: 9 RLAPFIQEYIYRKRWDSLRDAQIEACRVLFDTPHHLLIASGTASGKTEAAFFPALTELYH 68 Query: 72 EGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIR 131 E ILYI P+KAL D ++ L+ + V Sbjct: 69 RPSESVG---------ILYIGPLKALINDQFERIKELLRD------------GEVPVWHW 107 Query: 132 TGDTPAQERSKLTRNPPDILITTPESLYLMLTSR---ARETLRGVETVIIDEVHAVAGSK 188 GD E++KL + P +L TPESL +L +R + ++IDEVHA G+ Sbjct: 108 HGDVAQAEKTKLMQRPSGVLQITPESLEGLLMNRPNAIPALFHDLRYIMIDEVHAFMGAD 167 Query: 189 RGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGG--DRPVTVVNPPAMRHPQI 246 RG + L RL+ + +RIGLSAT+ A +LG +PV VV+PP R ++ Sbjct: 168 RGIQVISQLTRLERMASCKPRRIGLSATLGDYEIAARWLGAGTPQPVEVVSPPGGRKLKL 227 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 + + D + + + + +VFTNSR AE Sbjct: 228 SV----------EHFSFPDARDEREAEHLELAKQKYYNFIYDNTHRKKALVFTNSRTDAE 277 Query: 307 KLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAI 366 T L + A R +R HHGS+S R Sbjct: 278 LTTLELRRIAAKREERDVFH---------------------------VHHGSISAMLREE 310 Query: 367 TEQALKSGELRCV-VATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSK 425 TE AL+SG V AT +LELGID+G ++ VIQ+ P S +S +QR+GR+G + S+ Sbjct: 311 TEAALRSGPGPAVAAATVTLELGIDLGELERVIQLGAPYSCSSFVQRLGRSGRRGDQASE 370 Query: 426 GLFFPRTRRD------------LVDSAVIVECM-FAGRLENLTPPHNPLDVLAQQTVAAA 472 +F D L+ + ++E +E + P+ VL QT++ Sbjct: 371 MMFLCAEEEDEDAQLPARMPWTLLRAIAVIELYVRERWVEPVELRKKPVGVLYHQTMSTL 430 Query: 473 -AMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 ++ + + V ++ + + A L L + I Sbjct: 431 KSIGEAEPADLARAVLTLPAFRGVEPEEYKALLQYLL------------------QTDHI 472 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE--EKAGSRRVGELDEEMVYESRVNDIIT 589 G ++ + + + Y+V + E GS +G + + Sbjct: 473 QQTEEGTLIIGLGGEKVVNNFRFYAVFKDDEEHVVYNGSEEIGSI----TTVPPPGYCFS 528 Query: 590 LGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFS 649 L W+++++ V R W G G + + + L + + + Sbjct: 529 LAGKLWKVEEVDSKHKAVYVKSSRGKVDTLWLGAGGDVHTRVMQKMRQVLEVHTLYPYLA 588 Query: 650 GTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRV 709 L +A GL+ + ++P G + + G + Sbjct: 589 PGAANRLERARRLARESGLL-----NSPVIP-------------AGGDSLFILPWAGSKQ 630 Query: 710 HEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREA 769 + + G V +V +L A + + A Sbjct: 631 FRTLERLLKHNLSDPMGLRQVVPMEPYYMVVSGRAGAKELLAAIEAELASIPHPEALLAA 690 >UniRef50_P50830 Uncharacterized ATP-dependent helicase yprA n=32 Tax=Bacteria RepID=YPRA_BACSU Length = 749 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 112/621 (18%), Positives = 210/621 (33%), Gaps = 102/621 (16%) Query: 1 MADNPDPSSLLPDVFSPATRDWF-LRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTL 59 + + +P+ + R + Q + + E + + PT SGKTL Sbjct: 25 IEPREAKTRPMPESIDERIKAALSKRGIDELYTHQYSAFQYVQKGESIVTVTPTASGKTL 84 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 L L + ++ R LY+ P KAL D + L + + Sbjct: 85 CYNLPVLQSIAQDETN-----------RALYLFPTKALAQDQKSELNEIIDEMG------ 127 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETV 176 ++++ GDT R K+ R I+IT P+ L+ + + ++ + Sbjct: 128 ----IDIKSFTYDGDTSPAIRQKV-RKAGHIVITNPDMLHSAILPHHTKWVSLFENLKYI 182 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALL---HTSAQRIGLSATVRSASDVAAFLGGDRPV 233 +IDE+H G G+H+A + RL + + I SAT+ + ++ L G +P+ Sbjct: 183 VIDELHTYRGV-FGSHVANVIRRLKRICRFYGSDPVFICTSATIANPKELGEQLTG-KPM 240 Query: 234 TVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHR 293 +V+ + V + + S + + + Sbjct: 241 RLVDDNGAPSGRKHFVFYNPPIV-----------NKPLNIRRSATAEVNELAKEFLKNKV 289 Query: 294 STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIAR 353 TIVF SR E + + + EL + R Sbjct: 290 QTIVFARSRVRVEIILSHIQELVKKEIGTKS---------------------------IR 322 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 + G ++R E+ L+ G++ VV+T++LELG+D+G + + + P SVAS Q+ Sbjct: 323 GYRGGYLPKERREIERGLREGDILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQQA 382 Query: 414 GRAGHQVGGVSKGLFFPRTRRDLVDSAVI--VECMFAGRLENLTPPHNPLDVLAQQTVAA 471 GRAG + + L +D ++ E F E+ L +L A Sbjct: 383 GRAGRR---HGESLIIMVANSTPIDQYIVRHPEYFFNRSPESARINPENLIILVDHLKCA 439 Query: 472 AAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGI 531 A + DE + + L+ L + W E+ Sbjct: 440 AYELPFRADEEFGAM------------EVSDILEYLQE---EAVLHRNGERYHWASES-- 482 Query: 532 LTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYE-SRVNDIITL 590 A + A +V++ + + A R +GE+D I Sbjct: 483 FPASNISLRSASQE----------NVVIVDQSDIANVRIIGEMDRFSAMTLLHDEAIYLH 532 Query: 591 GATSWRIQQITRDQVIVTPAP 611 ++++++ D Sbjct: 533 EGVQYQVEKLDWDHKKAYVRK 553 >UniRef50_UPI00017C2C1A PREDICTED: similar to HFM1 protein n=1 Tax=Bos taurus RepID=UPI00017C2C1A Length = 1437 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 103/571 (18%), Positives = 197/571 (34%), Gaps = 69/571 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYAL 66 + +P F ++ F +Q + + + + ++ APTGSGKT+ L Sbjct: 266 VTEIPAKFRSIFKE-----FPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAIT 320 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 L +I+Y++PIKAL + + + I L Sbjct: 321 RLLME-------VPLPWSNIKIVYMAPIKALCSQRFDDWKKKFGPI------------GL 361 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAV 184 TGDT + ++ I++TTPE M T + R+ + V +IDEVH V Sbjct: 362 NCKELTGDTVMDDLFEI--QHAHIIMTTPEKWDSM-TRKWRDNSLVHLVRLFLIDEVHVV 418 Query: 185 AGSKRGAHLALSLERLD--ALLHT---------SAQRIGLSATVRSASDVAAFL-GGDRP 232 RG L + + R+ +L + + +SAT+ +A D+A +L G+R Sbjct: 419 KDENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVAVSATIPNAEDIAEWLSDGERS 478 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 + PV V S + + Y I+ Sbjct: 479 AVCLKMDERHR-------PVKLRKVVLGFPSSDNQTEF--KFDLTLNYKIASIIQTYSDQ 529 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 + T+VF +R ++ + L + ++ + ++++ + Sbjct: 530 KPTLVFCATRKGVQQAASVL----VKDAKFIMTVEQKQRLQKCAYSIKDSKLRDILIHGV 585 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PL 404 HH + R + E A G++ + TS+L +G+++ A +VI+ Sbjct: 586 AYHHAGMELSDRKVVEGAFTVGDIPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEY 645 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPR--TRRDLVDSAVIVECMFAGRLENLTPPHNPL 461 S LQ IGRAG Q + + R T+ + + + + +L N Sbjct: 646 SETDILQMIGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTIESSLHRHLIEHLNAE 705 Query: 462 DVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRP 521 VL T A++ ++ Y R + + ++ + + Sbjct: 706 IVLHTITNVNIALEWIRSTLLYIRALKNPSHYGFASGLNKDGIESKLQELCLKNLNDLSS 765 Query: 522 K-LVWNRETGILTARPGAQLL--AVTSGGTI 549 L+ E +L+ + T+ Sbjct: 766 LNLIKMDEDINFKPTEAGRLMAWYYITFETV 796 >UniRef50_UPI000186F1CC ATP-dependent DNA helicase MER3, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186F1CC Length = 1018 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 109/602 (18%), Positives = 213/602 (35%), Gaps = 71/602 (11%) Query: 1 MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEH-ALVIAPTGSGKTL 59 M P S L D+ P +++ ++Q QT ++ ++ APTGSGKT+ Sbjct: 1 MEFQPLNYSTLEDL--PLKYRQIFQSYSSFNSIQTQTLSHIFNKKNSLVITAPTGSGKTV 58 Query: 60 AAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRR 119 L + L + + +++Y+ P+KAL + + + + Sbjct: 59 ILELAIVKLLMN-----FEKTNFNNDFKVVYVCPVKALCNERFNDWEPKFR--------- 104 Query: 120 GETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETV 176 + + TGD +++ITTPE LT + R+ ++ V+ Sbjct: 105 ---CLGISCIEVTGD----GGDYFDLVGYNLIITTPEKWDS-LTRKWRDNAGLVQLVKLF 156 Query: 177 IIDEVHAVAGSKRGAHLALSLERLDALLH----TSAQRIGLSATVRSASDVAAFLGGDRP 232 +IDEVH + KRG L + R+ + + + +SAT+ + D+A +LG Sbjct: 157 LIDEVHLLGDFKRGPVLEAIVCRMKTVSKVLKLEPVRFVAISATIYNVEDLALWLGSKDS 216 Query: 233 VTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRH 292 V PV V + Y ++ + Sbjct: 217 PADFF------KFGNDVRPVQLQKIVKGYYQPPKQSDFL--FDIQLSYKLKTVILDYSNG 268 Query: 293 RSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA 352 + ++VF ++R + L+E ++ + + + T N+++ + Sbjct: 269 KPSLVFCSTRKSVLQTAKILSEQLTFHFTQTQLENLS----DGAAFITDNKLRELILCGI 324 Query: 353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PL 404 HH V+ E R + SG L +VATS+L +G+++ A +VI+ Sbjct: 325 GYHHAGVTSEDRHHVQNLFASGSLPILVATSTLAMGVNLPAHLVVIKSTKQYKAGRLEEY 384 Query: 405 SVASGLQRIGRAGH-QVGGVSKGLFFPRTR-----RDLVDSAVIVECMFAGRLENLTPPH 458 +S LQ IGRAG Q + + + +++S ++E +L Sbjct: 385 PESSILQMIGRAGRPQFDTTAIAIIMTKNDTVGKYEKMLESKEVIESSL---HLHLPEYL 441 Query: 459 NPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSA 518 N VL T + AM+ + Y R + + L ++ + + Sbjct: 442 NSEIVLYTITDLSVAMEWICNTFLYVRAMKNPKYYGLDPSGNRFKIEKGLELMCLKEING 501 Query: 519 FR--PKLVWNRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGEL 574 + + + ++ +L S T + + L + + L Sbjct: 502 LKKAELIEVSDNGMDISPTAHGRLMSHFYLSFET------FKIFLQIKGTETMDEILSSL 555 Query: 575 DE 576 E Sbjct: 556 CE 557 >UniRef50_P51979 ATP-dependent DNA helicase MER3 n=8 Tax=Saccharomycetaceae RepID=HFM1_YEAST Length = 1187 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 111/605 (18%), Positives = 215/605 (35%), Gaps = 78/605 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYAL 66 +++LPD F F + +Q + + S E+ ++ +PTGSGKT+ L L Sbjct: 123 TTILPDSFRGVF------KFTEFNKMQSEAFPSIYESNENCIISSPTGSGKTVLFELAIL 176 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 + + ++I+YI+P K+L ++ +N + VNL Sbjct: 177 RLIKETNSDTN-------NTKIIYIAPTKSLCYEMYKNW--------------FPSFVNL 215 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVETVIIDEVHA 183 VG+ T DT E K +I+ITTPE +LT R + V+ V++DE+H Sbjct: 216 SVGMLTSDTSFLETEKA--KKCNIIITTPEKWD-LLTRRWSDYSRLFELVKLVLVDEIHT 272 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--GGDRPVTVVNPPAM 241 + KRGA L + L R++ + + + + LSATV + D+A +L + P +++ Sbjct: 273 IKE-KRGASLEVILTRMNTMCQ-NIRFVALSATVPNIEDLALWLKTNNELPANILSFDES 330 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNS 301 V V + D ++ +I+ I+++ +R ++F + Sbjct: 331 YR-------QVQLTKFVYGYSFNCKNDF---QKDAIYNSKLIEIIEKHADNRPVLIFCPT 380 Query: 302 RGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSK 361 R L + + + + HH +S Sbjct: 381 RASTISTAKFLLN----------NHIFSKSKKRCNHNPSDKILNECMQQGIAFHHAGISL 430 Query: 362 EQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRI 413 E R E+ +G + + +TS+L +G+++ A ++I+ S LQ I Sbjct: 431 EDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQEYSDLDVLQMI 490 Query: 414 GRAGHQVGGVSKGLFFPRTR--RDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVA 470 GRAG + ++ + + L NL L Sbjct: 491 GRAGRPQFETHGCAVIMTDSKMKQTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYSI 550 Query: 471 AAAMDALQVDEWYSRVRRAA-PWKDLPRRV-FDATLDMLSGRYPSGDFSAFRPKLVWNRE 528 A++ L+ +Y R + ++++ R V F + D ++ + + Sbjct: 551 ETAVNWLRNTFFYVRFGKNPAAYQEVNRYVSFHSVEDSQINQFCQYLLDTLVKVKIIDIS 610 Query: 529 TGILTARPGAQ---LLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVN 585 G + ++ + + + +E V R N Sbjct: 611 NGEYKSTAYGNAMTRHYISFESM----KQFINAKKFLSLQGILNLLATSEEFSVMRVRHN 666 Query: 586 DIITL 590 + Sbjct: 667 EKKLF 671 >UniRef50_C4Y376 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y376_CLAL4 Length = 2130 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 124/578 (21%), Positives = 203/578 (35%), Gaps = 65/578 (11%) Query: 21 DWFLRAFK-----QPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGG 74 +W AF +Q Q + A E+ L+ APTG+GKT A L L L Sbjct: 472 EWAQAAFPAGETATLNRIQSQIYPKAFLSDENLLLCAPTGAGKTNVAMLALLRVLGNNRD 531 Query: 75 EDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGD 134 R K + +YI+P+KAL + R L T + V TGD Sbjct: 532 ASGRVMV--KKFKCVYIAPLKALVAEQTREFSRRL------------TSFGVVVKELTGD 577 Query: 135 TPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLA 194 + R +L+TTPE + +T + R V+ V++DE+H + +RG L Sbjct: 578 SALSARE---IREAQVLVTTPEKWDV-VTRKEPHFARLVQLVVLDEIHLLHD-ERGPVLE 632 Query: 195 LSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVAN 254 + R A+ +GLSAT+ + DVA+FLG R + A P Sbjct: 633 SIVVRAKRAA--HARLVGLSATLPNYEDVASFLGV-RAAGLFYFDASFRP---------- 679 Query: 255 MDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNE 314 + G E + ++ + V + IVF +SR + L Sbjct: 680 -CPLQQEYIGIKEKKAIRKVAAMNDACFEKVASSVAQGHQVIVFVHSRKDTVRTAQFLAA 738 Query: 315 LYAARLQRS-PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKS 373 A R+ S + + A + + HH +++ R+ E Sbjct: 739 RAEAEGVRTVRSDGAREILAQEAAAAKNKNLAEILPSGFAVHHAGLARPDRSAVEDLFAQ 798 Query: 374 GELRCVVATSSLELGIDMGAVDLVIQV---ATP-------LSVASGLQRIGRAGH-QVGG 422 G ++ +V+T++L G+++ A ++I+ +P LS LQ +GRAG + Sbjct: 799 GHVQVLVSTATLAWGVNLPAHTVIIKGTDTYSPEKGSWVQLSPQDILQMLGRAGRPRYDK 858 Query: 423 VSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDAL 477 +G+ +++ + +E RL + N AAA D L Sbjct: 859 SGEGVIITAHDELQYYLAVLNQQLPIESQLMARLADCI---NAEVASGAVDCRAAACDWL 915 Query: 478 QVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPG 537 Y R+ R+ + T LV + ++ P Sbjct: 916 AQTYLYIRMLRSPRLYQVGAEYAGDT------ALERKRADLAHSALVLLAQHRLVDYDPQ 969 Query: 538 AQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELD 575 A T G I S A + E+D Sbjct: 970 TGKTAATELGRIAANFYISYTTAAAYHSALRPWMSEID 1007 Score = 176 bits (446), Expect = 7e-42, Method: Composition-based stats. Identities = 97/555 (17%), Positives = 176/555 (31%), Gaps = 80/555 (14%) Query: 1 MADNPDPSSLLPDVFSPATR---DWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSG 56 M P + L D P + + +Q Q H R+ E+ V AP G+G Sbjct: 1286 MPKAPSAPTKLADATVPLSALDLEVKDLGIPHLNRMQTQCLHSVFRTNENVFVGAPKGTG 1345 Query: 57 KTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADER 116 KT+ A L L ++ R +YI P +AL R + D Sbjct: 1346 KTVLAQLALL------------ACWRQNKQRAVYIQPTQALVDARAREWAALFAPLTDPP 1393 Query: 117 RRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVET 175 + V TGD A R +++ TPE + R+R L+ + Sbjct: 1394 K---------NVARLTGDAAADAR---ILALNHLVLATPEQFDAVSRRWRSRRALQDLGV 1441 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHT--SAQRIGLSATVRSA----SDVAAFLGG 229 VI D+VH + L RL + + + + L S ++A++LG Sbjct: 1442 VIADDVHLLGAR---PAYEAVLARLRLMAGQGVNVRVVAL----GSPVLYGREMASWLGC 1494 Query: 230 DRPVT---VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286 + T V P R ++ + A+ + + + + + I+ Sbjct: 1495 AKEHTYNFVDAPDGAREVRLEPLGARADAAACAKFVAASRQCVAFAPTHVAAAELVAAIV 1554 Query: 287 DEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSG-ATSNRVQ 345 + V + S + N+ + + + D A + ++G + Sbjct: 1555 EVVEENGK------SDKNGKNGENGKNDKNDTNDKNDKNGSNDQASPDLSAGNIADGAAR 1608 Query: 346 SSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVAT-SSLELGIDMGAVDLVIQVAT-- 402 + H ++ RA + G+LR +VAT + + D+ + + Sbjct: 1609 RALGRGVGLLHENLVPADRAHIVRLFSKGQLRVLVATRPTAAYAP--PSRDVAVFGTSAS 1666 Query: 403 PLS------VASGLQRIG--RAGHQVGGVSKGLFFPRTRRDLVDSAV-----IVECMFAG 449 L+ ++ + +G R G L F + + VE G Sbjct: 1667 ELTHSGAYFLSDVAEMVGCARGGR-------ALIFAPAPQLAYYARFVAAPLPVESALDG 1719 Query: 450 RLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSG 509 +L P + A+D L Y R+ + + L + LS Sbjct: 1720 ---SLAAPFAYEVAVRTFRSKQDAVDWLTYTWLYRRLAQNPSFYGLKDVSHLGVSEFLSE 1776 Query: 510 RYPSGDFSAFRPKLV 524 S S L+ Sbjct: 1777 LVESTLESLAEGGLL 1791 >UniRef50_UPI0000E4A360 PREDICTED: similar to RNA helicase n=4 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A360 Length = 1419 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 102/475 (21%), Positives = 180/475 (37%), Gaps = 53/475 (11%) Query: 14 VFSPATRDWFLRAFKQPTAVQPQTWHVAAR-SEHALVIAPTGSGKTLAAFLYALDRLFRE 72 P + F + K +Q + A SE+ L+ APTG+GKT A L L + + Sbjct: 116 SLDPVGQLAF-KGIKTLNRIQSVVFETAYNKSENLLICAPTGAGKTNIAMLAILQEVRKH 174 Query: 73 GGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 132 D R A K +++Y++P+KAL ++ R LK + L V T Sbjct: 175 --LDARGAVKHNEFKVVYVAPMKALAAEMTRTFGSRLK------------PLGLSVRELT 220 Query: 133 GDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAVAGSKRG 190 GD ++ + +L+TTPE ++ + + V+ +IIDEVH + RG Sbjct: 221 GDMQLTKKEMM---DTHMLVTTPEKWDVVTRKSVGDVALTQLVKLLIIDEVHLLHED-RG 276 Query: 191 AHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIR 247 A + + R + + + + +GLSAT+ + DVA FL + + A P Sbjct: 277 AVIESLVARTLRQVESYQNNVRIVGLSATLPNYEDVARFLHVNLKTGLFYFDARFRP--- 333 Query: 248 IVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEK 307 VP+ + SG G + + + + V + +VF +R K Sbjct: 334 --VPLRQTYIGVQLGSGGGGSRFVEQRKRMDVVCYEKVRNLVDQGHQVMVFVFARNATVK 391 Query: 308 LTARLNELYAARLQRSPS----IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQ 363 L + A + A E + + +++ HH + ++ Sbjct: 392 SAIDLRDRAIANNESKMFSAEENEEYEAAREEVQKSRNRQLKELFDVGFGMHHAGMLRQD 451 Query: 364 RAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLS----------VASGLQRI 413 R + E+ +G ++ + TS+L G+++ A ++I+ + LQ Sbjct: 452 RNLVERYFAAGLIKVLCCTSTLAWGVNLPAHAVIIKGTQFYDPDKSKFEDIGILDVLQIF 511 Query: 414 GRAGH-QVGGVSKGLFFP-----RTRRDLVDSAVIVECMFAGRLENLTPPHNPLD 462 GRAG Q +G L+ +E F RL+ N Sbjct: 512 GRAGRPQYDTFGEGYIITAINKLVHYLKLMMDQTPIESQFIKRLD---DNLNAEV 563 Score = 282 bits (723), Expect = 6e-74, Method: Composition-based stats. Identities = 86/510 (16%), Positives = 164/510 (32%), Gaps = 65/510 (12%) Query: 11 LPDVFSPATRDWFLRAFKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYALDR 68 LP + + +F + Q ++ + L+ AP G GK++A L L Sbjct: 856 LPKTALQNLQYQQMFSFDEFNRFQKVVFNKLYTETDSNVLIGAPGGMGKSVATELAIL-- 913 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 R ++++YI+P+ + L+ R R + +V Sbjct: 914 ---------GAFRARPDTKVVYIAPL-----------RSLLRRRFRVWRARFGDILGKKV 953 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSK 188 + GD + + DI++ T E + + V +++D++ +A Sbjct: 954 FMLNGDVSSDVNT---VKRADIILATSEKWDAVCRRG--QNTEDVSLLVLDQLQFLASDC 1008 Query: 189 RGAHLALSLERLD--ALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQI 246 G L + R+ + + + + LS + ++ +VA +L + R + Sbjct: 1009 -GPALEAIVTRMKITSRSTSKVRIVALSTPMSNSIEVAEWLDVKEVGSYNFKADERPVPL 1067 Query: 247 RIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAE 306 I V G + R ++ I I R + I+F S+ Sbjct: 1068 EITV------------LGFSGKYYHNRAAAMNKPIYQEI-QANAREKPVIIFVASKKQTS 1114 Query: 307 KLTARLNELYAARLQRSPSIAV--DAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQR 364 L + E T + ++ S F HH +S E R Sbjct: 1115 ATAFELIAHLRTEKDPKIWLHEMTSEEIEEVCKDITDDNLKLSLTFGVGVHHAGLSVEDR 1174 Query: 365 AITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV----------ATPLSVASGLQRIG 414 EQ + ++ +VAT +L D+GA +V++ + V LQ +G Sbjct: 1175 RTVEQLYRERHIQVLVATKNLAWATDLGARLVVVKGTEQYDAKSERYVDMPVTDILQMVG 1234 Query: 415 RAGHQVGGVSKGLFFPRTR------RDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQT 468 RAGH L+ ++ +E +E+L N + T Sbjct: 1235 RAGHHSRDHKGSAVVMVHDVKAHYYEGLLKESMNIES--RHSVESLADHVNAEIAAGELT 1292 Query: 469 VAAAAMDALQVDEWYSRVRRAAPWKDLPRR 498 + +Y RV + Sbjct: 1293 TVMEVERYIMKTFFYRRVSSNPSFYGAKDA 1322 >UniRef50_D0NDF2 DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDF2_PHYIN Length = 2164 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 116/523 (22%), Positives = 200/523 (38%), Gaps = 45/523 (8%) Query: 4 NPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAF 62 +P P L D P + ++ F+ +Q Q +H ++ + L+ APTGSGKT+ A Sbjct: 1272 HPQPLQSLDD---PVYQALYVGKFQYFNPIQTQAFHQLYHQNGNVLLCAPTGSGKTVCAE 1328 Query: 63 LYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGET 122 L L + A + S I+YI+P+KAL + + + R+ Sbjct: 1329 LAMLRVWKQLQESSQGSARRTCQSLIVYIAPMKALAREKVAEWKTRFENNPQLRK----- 1383 Query: 123 EVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSR--ARETLRGVETVIIDE 180 +V TGDT DI++TTPE L+ S R + + V++DE Sbjct: 1384 ----KVVEVTGDTLVNV--DFILTKADIVVTTPEKWDLLTRSSSIGRALMTQMALVVVDE 1437 Query: 181 VHAVAGSKRGAHLALSLERLDAL--LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNP 238 VH V + RGA L + + RL + IGLS + +A DV +LGG NP Sbjct: 1438 VHLVGEAPRGAVLEVLISRLRRFQRSGPPIRVIGLSTALANAGDVGRWLGGITSSHAKNP 1497 Query: 239 PAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVF 298 + R V MD G E + R ++ I + +VF Sbjct: 1498 DVGQVYNFRASVRPVPMD---VHIQGFPERHYVARMAAMNKPTFMAI-KTHSPDKPVLVF 1553 Query: 299 TNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT---SNRVQSSDVFIARSH 355 +S+ + L + A + +D A +S ++ ++ + F H Sbjct: 1554 VSSKAQTKLTALDLIQFCVADDGDKRFLKMDEAVMDSICQSSQIGDETLKHTLSFGIGLH 1613 Query: 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV--------ATPLSVA 407 H +++ RA+ E+ + ++ V++TS+L G+++ A +V++ ++ Sbjct: 1614 HAGLARRDRALVEKLYRDRLIQVVISTSTLAWGVNLPAHLVVVKGTEYFQNGRYRSYPLS 1673 Query: 408 SGLQRIGRAGHQ-VGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLEN-------LTPPHN 459 LQ IGRAG + + + + E + +E+ L N Sbjct: 1674 DLLQMIGRAGRPLLDDKGVACVLVEESKKNMTQRFLYEPL---AVESCLGGNAVLANHLN 1730 Query: 460 PLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDA 502 MD L + RV + + + V A Sbjct: 1731 AEIAAGLVRSTRDVMDYLSWSLLFQRVLKNPSFYGVGTEVVAA 1773 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 110/614 (17%), Positives = 211/614 (34%), Gaps = 97/614 (15%) Query: 19 TRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDT 77 + +Q + ++ A +++ LV APTG+GKT A L L + + ++ Sbjct: 349 FAQTAFHGITELNRLQSKLFNAAYTSNQNLLVCAPTGAGKTNVAMLTILQEVKTQLSRES 408 Query: 78 REAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPA 137 +I+Y++P+KAL +V LK + L+V TGD Sbjct: 409 SHGVAN--MKIIYVAPMKALAQEVVTKFGQRLKALK------------LKVRELTGDMQL 454 Query: 138 QERSKLTRNPPDILITTPESLYLMLTSRA--RETLRGVETVIIDEVHAVAGSKRGAHLAL 195 ++ +++TTPE ++ + + L V+ +IIDEVH +A +RG + Sbjct: 455 TKKE---IEETHVIVTTPEKWDVITRKSSTQQSLLSQVKLLIIDEVHLLAD-ERGPVIET 510 Query: 196 SLERLDALLHTS---AQRIGLSATVRSASDVAAFLGGDRP---------------VTVVN 237 + R + ++ + +GLSAT+ + DVA+FL P + Sbjct: 511 IVARTLRRVESTQSMIRIVGLSATLPNYVDVASFLRVYVPSGDSRMQNAATNGGKGGLFF 570 Query: 238 PPAMRHP-------------------------QIRIVVPVANMDDVSSVASGTGEDSHAG 272 A P ++ V A G Sbjct: 571 FDATYRPVPLDQTFIGVSTNASLKEALGLSAAELSTVTASEEDLAKEKKAVGATMSKQRQ 630 Query: 273 REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQ---------RS 323 + + L +V +VF +SR + EL + Sbjct: 631 IQLMMNKLTLAHCLKQVQHSEQVMVFVHSRKETAATMHSIVELARGNEEEPGTLEAFLPP 690 Query: 324 PSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATS 383 + + E + + ++ + HH + + R +TEQ + G +R + T+ Sbjct: 691 SELQMPLNLQERVQKSRNKELKELLGYGLGIHHAGMLRSDRNLTEQLFELGYIRVLCCTA 750 Query: 384 SLELGIDMGAVDLVIQVA----------TPLSVASGLQRIGRAGH-QVGGVSKGLFFPRT 432 +L G+++ A ++I+ T LS+ +Q GRAG Q + Sbjct: 751 TLAWGVNLPAHSVLIKGTQVYNADKGGMTQLSMLDVMQIFGRAGRPQYDTSGDAVLVTTQ 810 Query: 433 RR-----DLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVR 487 + L+ + + +E ++ L N V + A L Y R+R Sbjct: 811 EQLPHYLRLLTTGIPMESAL---IKALPDHLNAEIVSGTVSNLEEACTWLSYTYLYVRMR 867 Query: 488 RAAPWKDLPRRVFDATLDMLSGRY-----PSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 + + + +++ R + +A R + + + + + G A Sbjct: 868 KNPLAYGMKLDDVNEDPMLVARRRQLLMDAAEKLAACRMIKILREKVRLDSDQEGKIAFA 927 Query: 543 VTSGGTIPDRGMYS 556 VTS G + Sbjct: 928 VTSMGRVASHFYIQ 941 >UniRef50_B2JHB8 DEAD/DEAH box helicase domain protein n=11 Tax=Proteobacteria RepID=B2JHB8_BURP8 Length = 744 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 162/742 (21%), Positives = 258/742 (34%), Gaps = 110/742 (14%) Query: 1 MADNPDPSSLLPDVFSPATRDW-FLRAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKT 58 + + S D+ R W + + + Q + ++ A T +GKT Sbjct: 3 LPASGSTDSRSFDLLDERIRRWIWREGWTELRDAQERAVPALIDADRDVIIAAATAAGKT 62 Query: 59 LAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRR 118 AAFL L L R+ +LYISP+KAL D L + + Sbjct: 63 EAAFLPILSNLLRDAPC---------RGSVLYISPLKALINDQWSRLDGLCEALQ----- 108 Query: 119 RGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARET---LRGVET 175 + V GD + + + +NP +L+ TPESL M +R + Sbjct: 109 -------IPVTGWHGDVSSGRKQRFVKNPTGVLLITPESLEAMFVTRGASLAATFGALRY 161 Query: 176 VIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTV 235 V++DE+HA GS+RG L ++R+D + R+GLSAT+ A FL +V Sbjct: 162 VVVDELHAFIGSERGMQLQSLMQRVDRVCGRRVPRVGLSATLGDMRLAAGFLRPKGAASV 221 Query: 236 -VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 + A +++I+V + E+ + +VLR + Sbjct: 222 QIVESAEAGQELKILVKGYVEKPPRIQSEPGIENPGLEDVVPASTVDVANHMYKVLRGSN 281 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 ++F NSR E L + Sbjct: 282 NLIFPNSRRQVELYADLLRRACERDGYPNEFW---------------------------P 314 Query: 355 HHGSVSKEQRAITEQALKSGELRC-VVATSSLELGIDMGAVDLVIQVATPLSVASGLQRI 413 HHGS+SKE R TEQALK G+ + T++LELGID+GAV V QV P SVAS QR+ Sbjct: 315 HHGSLSKELREQTEQALKKGDRPASAICTTTLELGIDIGAVKSVAQVGAPPSVASLRQRL 374 Query: 414 GRAGHQVGGVSKGLFFPRT-------------RRDLVDSAVIVECMFAGRLENLTPPHNP 460 GR+G + G + + R LV S +V + G E Sbjct: 375 GRSGRRKGEAAILRCYCVEAELHSGSDLSDRLRESLVQSVAMVNLLLRGWFEPPRAGGMH 434 Query: 461 LDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAF 519 L QQ ++ A + +E + + P+ + + F A L L R Sbjct: 435 PSTLVQQILSIIAERGGARANELWDTLVAQGPFGAIDKATFTAILRGLGAR--------- 485 Query: 520 RPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEK--AGSRRVGELDEE 577 ++ G L + Y+ + E + AG+R +G + Sbjct: 486 ---------DLLVQEAGGLLLHGTAGERLVNHYAFYASFSTDDEFRIVAGARVLGSVPVS 536 Query: 578 MVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGD 637 + G WR+Q++ + V P + P + G G+ E+ + + Sbjct: 537 R--PLAPGQGLVFGGQRWRVQEVDAAKKTVYVKPDQGGVPPVFDGNGSLVHDEVRREMFN 594 Query: 638 FLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDW 697 L A F T L E AT V Sbjct: 595 VLKDGAPVVFLDSTGRELLEEAR------RYFASNELATRAV-------------FTHGG 635 Query: 698 RIILHSPYGRRVHEPWAVAIAG 719 +L + G +++ V + Sbjct: 636 NTVLATWSGDWINDALVVLLRA 657 >UniRef50_C8VGA2 DEAD/DEAH box DNA helicase (Mer3), putative (AFU_orthologue; AFUA_6G13080) n=2 Tax=Emericella nidulans RepID=C8VGA2_EMENI Length = 1385 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 108/587 (18%), Positives = 193/587 (32%), Gaps = 72/587 (12%) Query: 10 LLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSE-HALVIAPTGSGKTLAAFLYALDR 68 LPD + P F AVQ + +H +S+ + ++ APTGSGKT+ L Sbjct: 236 ELPDNYRPLF------NFPVFNAVQSKCFHAIYKSDDNVVIAAPTGSGKTVVMELAICRL 289 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 L K K +++Y +P K+L ++ R+ + L+ Sbjct: 290 L---------NIRKDKKFKVVYQAPTKSLCSERFRDWNQKFHAL------------GLQC 328 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRG---VETVIIDEVHAVA 185 TGDT + + I++TTPE M T + ++ +R V+ +IDEVH + Sbjct: 329 AELTGDTDHSQLGNVQNR--QIIVTTPEKWDSM-TRKWKDHIRLMQPVKLFLIDEVHTLK 385 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 + RGA L + R+ ++ ++ + + LSAT+ ++ D+A +LG R T + PA R Sbjct: 386 EA-RGATLEAVVSRMKSI-GSNVRFVALSATIPNSEDIATWLG--RNATSQHVPAHREHF 441 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 PV V + S I+ + ++F ++R Sbjct: 442 GEEFRPVKLQKFVYGYHFSGNNFAFDKLLNS-------NIIGTHSAKKPIMIFCSTRNST 494 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 L L++ + ++ + HH + E R Sbjct: 495 VSTAKELARLWSMSSRLVRMWKGPNKPL----PVKHADLKVTTAAGVAFHHAGLETEDRH 550 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGH-QVGGVS 424 + E G++ + G S +Q +GRAG Q + Sbjct: 551 LVENGYLQGKISVIC------YG-----------CGQEYSDLEVMQMLGRAGRPQFDDSA 593 Query: 425 KGLFFPRTRR-DLVDSAVIVECMFAGRLE-NLTPPHNPLDVLAQQTVAAAAMDALQVDEW 482 + R R + V L NL N L +A L Sbjct: 594 TAVILTRKERVSHYERLVSGSESVESSLHLNLIEHLNAEIGLGNIKSTESAASWLAGTFL 653 Query: 483 YSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLA 542 R+RR L + + D + + + E+ T A Sbjct: 654 SVRLRRNPTHYRLKEGANRNDTNEMLRHICEKDIKLLQEYALVDTESLKSTPFGYAMSRY 713 Query: 543 VTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIIT 589 T+ P+ + + + +E + + + Sbjct: 714 SIRYETMKTLIKMK---PKSDIAQILAIICQAEEFRDIRFKAGEKLL 757 >UniRef50_Q4DJ49 ATP-dependent RNA helicase, putative n=5 Tax=Trypanosoma RepID=Q4DJ49_TRYCR Length = 2240 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 117/609 (19%), Positives = 214/609 (35%), Gaps = 82/609 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAA-RSEHALVIAPTGSGKTLAAFLYA 65 P S P+ +Q +T+ A E+ LV APTG+GKT A + Sbjct: 398 PVSAFPEW-----AQVAFSGVTHLNPMQSKTFDCAFGSDENMLVCAPTGAGKTNIAMMAM 452 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L + + A + +++Y++P+KAL +V R L+ + Sbjct: 453 LRAV--KNATARSGAINLRELKMVYVAPMKALVQEVVRTFSNRLEQL------------G 498 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRAR-ETLRGVETVIIDEVHAV 184 L V +GD+ A + + +++TTPE ++ ++ +I+DEVH + Sbjct: 499 LTVVELSGDSNANQ---AQLSDAQLIVTTPEKWDVVTRKSVELGVASLLKLLILDEVHLL 555 Query: 185 AGSKRGAHLALSLERL----DALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 ++RG L + R T + +GLSAT+ + +DVA+FL DR + + Sbjct: 556 H-NERGPVLEAIVARTMLQQQLRGETDIRIVGLSATLPNYADVASFLQVDRQRGLFVFDS 614 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + + + + +L + ++VF + Sbjct: 615 SFRP-----------IPLQQTFCAIKKVRGTNQVAVMNLVTYDKLLQAAMSGEQSMVFVH 663 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE-------STSGATSNRVQSSDVFIAR 353 SR E + + + + + S +Q Sbjct: 664 SRKDTEYTVMYMIRRILEEKRTHYFVRPGSESEQLLREAAIDPSRPLRPSLQQMLPMGFA 723 Query: 354 SHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATP---------- 403 HH +S+ +R + E+ +R +V TS+L G+++ A ++I+ Sbjct: 724 VHHAGMSRGEREVVERLFADRHVRALVCTSTLAWGVNLPANQVIIKGTRVFNAAKGETEL 783 Query: 404 LSVASGLQRIGRAGHQVGGVSKGL-FFPRTRRDL------VDSAVIVECMFAGRLENLTP 456 LS LQ GRAG G S G + DL ++ + +E RL Sbjct: 784 LSALDVLQMFGRAGRVGFGSSLGRAAVITSAEDLHYYLSVLNDQLPIESQMMRRL---ID 840 Query: 457 PHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDAT-LDMLSGR-YPSG 514 N VL A + LQ Y R++R+ D L L + + Sbjct: 841 MFNAEVVLGHVGSVAEGVRWLQRTYLYVRMQRSPELYGTRASNADPLFLRHLENIVHTAA 900 Query: 515 DFSAFRPKLVWNRETGILTARPGAQL---LAVTS----------GGTIPDRGMYSVLLPE 561 D + ++ ++ +P ++ +TS G T+ D ++ + Sbjct: 901 DDLRRCQMVEYDTHARRISPKPYGRIASFYYITSASMTTYLTHLGRTMHDVDLFRLFAMS 960 Query: 562 GEEKAGSRR 570 E R Sbjct: 961 KEFSHILVR 969 Score = 76.1 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 98/575 (17%), Positives = 170/575 (29%), Gaps = 103/575 (17%) Query: 27 FKQPTAVQPQTWHVAAR--SEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRK 84 F + Q SE+ P G GKT A L+ L L +T + Sbjct: 1282 FTEFFPAQRDLVTPIMAYPSENIFAALPPGGGKTAIAELFILQFLLEGALLETNMGASEE 1341 Query: 85 TSRILYISPIKALGTDVQ---RNLQIPLKGIADERRRRGETEVNLRVGIR----TGDTPA 137 TS + P L ++ + + R + + RV G T Sbjct: 1342 TSMAEKLCP---LLSEKFCTSTAHEACAMRRFQDWRIKFGEGLKQRVAKLEPFGEGTTLK 1398 Query: 138 QERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSL 197 E+ I+I + L +L A + L V +I D VH + + G + L Sbjct: 1399 AEKVYQ----ATIIIASGSGLAPLLRQGAVDCLLSVTHIIADCVHLIRAPE-GRWMEECL 1453 Query: 198 ERLD---ALLH---TSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP 251 RL L++ A+ + LS + S ++V+ ++ + R +R+ Sbjct: 1454 ARLLSKPYLVNNGQKPARLLALSYPLISCTEVSRWMKIPAARQYNYGNSYRQLHVRL--- 1510 Query: 252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTAR 311 + R + + +VF S AE+L R Sbjct: 1511 -----------EALEQGGARSRYEAATVSALKELQKVRYASTPNVVFVPSAREAEELAKR 1559 Query: 312 LNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS-HHG-SVSKEQ------ 363 + D + H G S+ E Sbjct: 1560 I-----------VLRCRDFVPEAVCEDVEDQNIALLLSAGVAYMHRGTSLLDELIIIGHI 1608 Query: 364 ----RA-ITEQALKSGELRCVVAT--------SSL---------E-LGIDMGAVDLVIQV 400 R TE L +V T ++L E LG+ A V Sbjct: 1609 EKPARHPETEAVL----PLVLVCTFESAWRLPAALFGTAFVCAAERLGV---ASKFVNAS 1661 Query: 401 ATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRR-----DLVDSAVIVECMFAGRLENLT 455 SV+ LQ RA +++ + + R R L++ + +E + Sbjct: 1662 GGDCSVSELLQMTSRA------LNEAVVYCRAARRWVWGRLLNDPLPLESYL-RYPNDFC 1714 Query: 456 PPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGD 515 N + + + LQ + +R + +P + D S S Sbjct: 1715 DAVNAAVAQGRASDMPGVLRILQSHYFLYHLRTNLQFYGVPSK--DDIPAYASEFARSVI 1772 Query: 516 FSAFRPKLVWNRETG---ILTARPGAQLLAVTSGG 547 S + V E +T RP + +A+++ G Sbjct: 1773 ASLQQAGCVVVTEGDGDETVTVRPTTRGIALSNHG 1807 >UniRef50_C8S8J7 DEAD/DEAH box helicase domain protein n=3 Tax=Archaeoglobaceae RepID=C8S8J7_FERPL Length = 688 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 104/545 (19%), Positives = 202/545 (37%), Gaps = 69/545 (12%) Query: 8 SSLLPDVFSPATRDWFL-RAFKQPTAVQPQTWHV-AARSEHALVIAPTGSGKTLAAFLYA 65 L D S D R ++ Q + +++ +V PT SGKTL A L Sbjct: 4 VDALSDHLSKYVVDILKKRGIERLYPPQEEAVRKGLFSNKNLVVAIPTASGKTLIAELAM 63 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 + + R + LY P++AL + E+ Sbjct: 64 IYEVIR-------------GGKCLYTVPLRALAGEKFEEFSKW-------------EEIG 97 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVA 185 +++GI TGD +++ DI++TT E +L + A LR + +++DE+H + Sbjct: 98 VKIGISTGDYESRD---EWLGECDIVVTTSEKADSLLRNEAS-WLRNLSLLVVDEIHLID 153 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ 245 +KRGA L + + +L L + + + I LSAT+ +A ++A +L + + P + Sbjct: 154 SAKRGATLEVLIAKLKKL-NPNLRIIALSATIPNADEIAEWLNAELIKSEWRPTPLYEY- 211 Query: 246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLA 305 + P + + +S R I+ + +VF ++R A Sbjct: 212 --VFYPGRLLKFENGFLREVKAESSIER----------LIVRTLEEGGQVLVFESTRRNA 259 Query: 306 EKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRA 365 E +++ ++ + +A E G S ++ + HH + QR Sbjct: 260 ESYAVKISGYTKEFVEDNSDVAEKV--LEENEGEMSRKLSECVKLGSAFHHAGLLNSQRV 317 Query: 366 ITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVASGLQRIGRAG 417 E+A + G ++ +VAT +L G+++ A ++++ P+ V+ Q GRAG Sbjct: 318 AIEKAFREGRIKVLVATPTLAAGVNLPARRVILKSYRRYDSGAYAPIMVSEYKQMAGRAG 377 Query: 418 HQV-GGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDA 476 + + +TR + + + E AG E + L T++ + Sbjct: 378 RPGLDEYGEAIIVTKTRDEALK---VAERYLAGEPEKVISKLGSETHLRFHTLSLISEGI 434 Query: 477 LQV-DEWYSRVRRAAPWKD----LPRRVFDATLDM----LSGRYPSGDFSAFRPKLVWNR 527 ++ L + L + + Y F KL + Sbjct: 435 ASSFEDLLDFYSTTFFAYQNEFTLEWEIRRIVLQLEKWGMIVEYAPTSFGKLVSKLYIDP 494 Query: 528 ETGIL 532 +G + Sbjct: 495 LSGFI 499 >UniRef50_D2RJD3 DEAD/DEAH box helicase domain protein n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJD3_ACIFE Length = 757 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 145/760 (19%), Positives = 247/760 (32%), Gaps = 144/760 (18%) Query: 11 LPDVFSPATRDW-FLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYALDR 68 + D ++P +D+ + + + + +Q V + E+ L+ A T SGKT AAF L Sbjct: 3 IFDRYAPFVQDFIYSQGWSELRPIQVAAGDVLLNTDENLLLTASTASGKTEAAFFPILSL 62 Query: 69 LFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRV 128 + K+ +YI P+KAL D LQ + + V Sbjct: 63 FAQ---------APPKSVGCIYIGPLKALINDQFLRLQPLCEE------------GGIPV 101 Query: 129 GIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA---RETLRGVETVIIDEVHAVA 185 GD ++KL ++P IL TPESL +L + + V+IDEVH++ Sbjct: 102 WHWHGDVSQSHKAKLLKHPSGILQITPESLEALLLHKHMAIPRLFGDLRFVVIDEVHSLL 161 Query: 186 GSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL--GGDRPVTV--VNPPAM 241 RG ++RL L + +RIGLSAT+ V FL G R + V P Sbjct: 162 RGDRGGQTLCLIQRLSRLAGVNPRRIGLSATLGDPEKVGEFLSMGTGRKTLIPQVKAPGT 221 Query: 242 RHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGI--LDEVLRHRSTIVFT 299 R V + + + + G+ + E R + +VF Sbjct: 222 RWRLSMEHFYVKDAQAGEDRTDIAALPALDQKTDQAPAQADPGLGYIFEHTRGKKCLVFV 281 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 359 NSR E +T L + + + HHG++ Sbjct: 282 NSREECEGVTTSLRQYCELNHEPDRFL---------------------------IHHGNL 314 Query: 360 SKEQRAITEQALKSGELRCVVATSSLE-------------LGIDMGAVDLVIQVATPLSV 406 S R E+ +K E LGID+G ++ Q+ P +V Sbjct: 315 SASYRETAEELMKD------------ESRSLTTVTTSTLELGIDIGRLERAFQIDAPWTV 362 Query: 407 ASGLQRIGRAGHQVGGVSKGLFFPRT-------------RRDLVDSAVIVECMF-AGRLE 452 +S LQR+GR G + + F R L+ +++ +E Sbjct: 363 SSFLQRMGRTGRR-DLPPEMWFVIREDEPEIRAMLPATIPWKLLQGIALIQLYLEERWVE 421 Query: 453 NLTPPHNPLDVLAQQTVA-AAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRY 511 P +L QT++ A+ + RV R + + + + + L L Sbjct: 422 PPRLDRLPYSLLYHQTMSVLASNGEMSPAALADRVLRLSYFHRITQEDYKVLLRYLI--- 478 Query: 512 PSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGE--EKAGSR 569 E I G ++ + I Y V E + S+ Sbjct: 479 ---------------AEDHIQRTEQGGLIVGLAGERVIRSFKFYGVFQENEEFTVRCDSQ 523 Query: 570 RVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNG-RP 628 +G + V + I L WR+ ++ R + ++ ++P + GE G Sbjct: 524 ELGTV----VAPPPPGEKIALAGHVWRVLEVDRKRHVIY-CELVKGKVPAYFGECPGDIH 578 Query: 629 AELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLE 688 ++ E + L + + L + A G E Sbjct: 579 TKVLERMRRVLREDRNYPYLMKNAVARLQQARFTAKASG------------------AAE 620 Query: 689 RCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGAD 728 + +G L G + + G Sbjct: 621 KPLIRLGGKMWCLLPWLGSYGFLALERFLNLKCAQKLGLK 660 >UniRef50_UPI000175F3DC PREDICTED: similar to HFM1 protein n=3 Tax=Deuterostomia RepID=UPI000175F3DC Length = 1424 Score = 398 bits (1023), Expect = e-108, Method: Composition-based stats. Identities = 112/523 (21%), Positives = 196/523 (37%), Gaps = 63/523 (12%) Query: 8 SSLLPDVFSPATRDWFLRAFKQPTAVQPQTWH-VAARSEHALVIAPTGSGKTLAAFLYAL 66 S +P F +D F VQ Q V +++ + APTGSGKT+ L + Sbjct: 171 VSEIPAKFRSVFKD-----FPYFNYVQSQALDDVLYSNKNFVACAPTGSGKTVLFELAIV 225 Query: 67 DRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNL 126 L + R +Y++PIKAL + N + + L Sbjct: 226 RLLIE-------ASEPWHNVRAVYMAPIKALCSQQYDNWKQKFG------------PLGL 266 Query: 127 RVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE--TLRGVETVIIDEVHAV 184 + TGDT + ++ ++ TT E M T R ++ L + ++DEVH V Sbjct: 267 KCKELTGDTEIDDFFEI--QDAHLIFTTAEKWDSM-TRRWKDNCLLTSIRLFLVDEVHVV 323 Query: 185 AGSKRGAHLALSLERLDAL----------LHTSAQRIGLSATVRSASDVAAFLGGDRPVT 234 RGA L + + R+ + S + + +SAT+ + DV+ +L + Sbjct: 324 KDKTRGATLEVVVSRMKTMHFYRQAINPESKASVRFVAVSATIPNIQDVSEWLSDES--- 380 Query: 235 VVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRS 294 PA PV V G+ ++ + Y I+ + Sbjct: 381 ---GPATCLEMDESHRPVKLRKVVLGFPCGSNQNEF--KFDLSLNYKLANIIQTYSDQKP 435 Query: 295 TIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARS 354 T+VF ++R ++ + L + + SI + + +++ V+ Sbjct: 436 TLVFCSTRKGVQQSASVLAK----DARFIMSIDHKQRLVKYANSLLDAKLRDLFVYGIGY 491 Query: 355 HHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSV 406 HH + R ITE A G+L + TS+L +G++M A +VI+ S Sbjct: 492 HHAGMDVSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVVIKSTMHYVGGACEEYSE 551 Query: 407 ASGLQRIGRAGH-QVGGVSKGLFFPR--TRRDLVDSAVIVECMFAGRLENLTPPHNPLDV 463 A LQ IGRAG Q + + R T+ + ++C+ + NL N V Sbjct: 552 ADLLQMIGRAGRPQFDTTATAVIMTRPQTKDKYMHFLSGLDCIESSLHTNLVEHLNAEIV 611 Query: 464 LAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDM 506 L + A+D ++ Y R + +L + ++ Sbjct: 612 LHTISDVNMALDWIRSTFLYIRALKNPKHYELCLKNLNSLASF 654 >UniRef50_Q55NJ7 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q55NJ7_CRYNE Length = 1528 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 117/596 (19%), Positives = 199/596 (33%), Gaps = 80/596 (13%) Query: 7 PSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLYA 65 P S LP L F VQ + + +S E+ +V APTGSGKT L Sbjct: 178 PLSRLP------IDQRKLFKFPCFNNVQSEVFDDVYQSDENLVVSAPTGSGKTTIFELAF 231 Query: 66 LDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVN 125 L L +D+ + +YI+P KAL + ++ Q L + + Sbjct: 232 LHNLSFRTPDDSLKPL------AVYIAPTKALCNEKAKDWQERLS----------QALPD 275 Query: 126 LRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS--RARETLRGVETVIIDEVHA 183 + TGD + D+++TTPE M + + ++IDEVH Sbjct: 276 VICNEITGDYGNTSTIYNSIRTADLMVTTPEKFDSMTRRSRNLENMSQRLRLIMIDEVHI 335 Query: 184 VAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRP----------- 232 + S RGA L + + RL L + + LSATV + D+A +LG R Sbjct: 336 LRES-RGATLEVVISRLKGL-GRGIRFVALSATVPNIDDIARWLGPTRNEYGQLSRGVLV 393 Query: 233 -VTVVNPPAMRHPQI------------RIVVPVANMDDVSSVASGTGEDSHAGREGSIWP 279 V++ R P + PV + + S + + A R Sbjct: 394 GREVISAKEKRAPAVDDMPMAKVYKFGEEYRPVPLQRETYGIESTGNDWALANRLDK--- 450 Query: 280 YIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGA 339 IL + +VF +R + + + Y + + Sbjct: 451 -ELFPILLRHAAGQPVLVFCPTRKSCQATAESIFQSYEEARAKGLKLPWQ-HPPGVRLEL 508 Query: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQ 399 ++ HH + R E + G+L + +TS+L +G+++ A +VI+ Sbjct: 509 QDKKLTELSTCGIAVHHAGLDYGDRRAIEDGFRDGKLHMIASTSTLAVGVNLPAHTVVIK 568 Query: 400 VAT----------PLSVASGLQRIGRAGHQVGGVSKGLFFPRTR------RDLVDSAVIV 443 S Q +GRAG S + R + +++S ++ Sbjct: 569 GVMAWQGASSGFQEYSDIDIQQMVGRAGRPQYDTSGVVVVMCERSKVRKYQSMLNSQTVL 628 Query: 444 ECMFAGRL---ENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF 500 E L ++L N ++A + L+ ++ R+++ L Sbjct: 629 ESCLHENLTESDSLRSDINSEIGQGTIRSVSSAQEWLRNSFFHIRIQQNPKHYALSDAKD 688 Query: 501 DATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYS 556 + K + N E R L T G I M S Sbjct: 689 KPV-----EGAWEEWLDHYVEKALINLEKDGFIERADDDTLIPTETGKIMSSSMIS 739 >UniRef50_B4N718 GK23638 n=1 Tax=Drosophila willistoni RepID=B4N718_DROWI Length = 1808 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 165/437 (37%), Gaps = 54/437 (12%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 P LP P + FK +Q + + A S E+ L+ APTG+GKT A L Sbjct: 470 QPIDKLPKYVQPVFQ-----GFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLT 524 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 + + + ED + +I+Y++P+K+L ++ N L Sbjct: 525 MMREIGKHINEDGTINSQD--FKIIYVAPMKSLVQEMVGNFGRRLA------------CY 570 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRA-RETLRGVETVIIDEVHA 183 NL V TGD + ++ +++ TPE ++ R + V VIIDE+H Sbjct: 571 NLVVSELTGD---HQLTREQIAATQVIVCTPEKWDIITRKGGERTFVSLVRLVIIDEIHL 627 Query: 184 VAGSKRGAHLALSLERLDALLHT---SAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPA 240 + +RG L + R + T + +GLSAT+ + DVAAFL + Sbjct: 628 LHD-ERGPVLEALVARTIRQIETTQEEVRLVGLSATLPNYQDVAAFLRVKPDKGLFYFDN 686 Query: 241 MRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTN 300 P + G E R + + ++ R+ +VF + Sbjct: 687 SYRPV-----------SLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRN-QVLVFVH 734 Query: 301 SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFE----STSGATSNRVQSSDVFIARSHH 356 SR K + ++ + + +A E + ++ + HH Sbjct: 735 SRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNTELKELLPYGFAIHH 794 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVA----------TPLSV 406 +S+ R + E ++ +V+T++L G+++ A ++I+ LS Sbjct: 795 AGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSA 854 Query: 407 ASGLQRIGRAGHQVGGV 423 LQ +GRAG Sbjct: 855 LDVLQMLGRAGRPQYDT 871 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 110/600 (18%), Positives = 205/600 (34%), Gaps = 71/600 (11%) Query: 5 PDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFL 63 P P S L P ++ + F Q +Q Q ++ S E+ V APTGSGK A Sbjct: 972 PLPISALR---QPKFESFYNQKFAQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEF 1028 Query: 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 + + R +Y+ +AL V + + Sbjct: 1029 AIMRLFTNQADG-----------RCVYLVSQEALADSVFADWHSKFSAL----------- 1066 Query: 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTS-RARETLRGVETVIIDEVH 182 +++V TG+T + ++ITT + ++ + R+ ++ V I+DE+ Sbjct: 1067 -DIKVVKLTGETGTDLK---LIAKGQLIITTADKWDVLSRRWKQRKNVQLVNLFIVDELQ 1122 Query: 183 AVAGSKRGAHLALSLERLDAL---LHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPP 239 V G G L + R+ + + + + LSA++ A DVA +LG + T P Sbjct: 1123 LVGGED-GPVLEIVCSRMRYISSQIEKQIRIMALSASLTDARDVAQWLGCNPNATFNFHP 1181 Query: 240 AMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFT 299 ++R + + + G +A R ++ + IL H+ IVF Sbjct: 1182 SVRPIPLELHI------------QGFNVTHNATRIATMSKPVYNSILKW-SAHKPVIVFV 1228 Query: 300 NSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFES-TSGATSNRVQSSDVFIARSHHGS 358 +SR A + A+ LQ + + + T ++ + H Sbjct: 1229 SSRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIQPFLERITDKTLKETLAQGVAYLHEG 1288 Query: 359 VSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVI----------QVATPLSVAS 408 ++ + EQ SG ++ V + L G+ + A +I + Sbjct: 1289 LTASDHRLVEQLFDSGAIQVAVVSRDLCWGMSISAHLAIIMDTQFYNGKNHSYEDYPITD 1348 Query: 409 GLQRIGRAGHQV-GGVSKGLFFPRTR-RDLVDSAVIVECMFAGRLEN-LTPPHNPLDVLA 465 LQ IGRA +K + ++ +D + L++ + N V Sbjct: 1349 VLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTK 1408 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVW 525 A+D L Y R+ + + +L D LS + + K + Sbjct: 1409 TIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKCIS 1468 Query: 526 NRETGILTARPGAQL--LAVTSGGTIPDRGMYSVLLPEGEEKAGSRRV----GELDEEMV 579 + + + TI ++S+ L + G + E +E MV Sbjct: 1469 VEDDMDTLPLNLGMIAAYYYINYTTI---ELFSLSLNSKTKVRGLLEIISSAAEYEEVMV 1525 >UniRef50_Q6CR67 KLLA0D11462p n=1 Tax=Kluyveromyces lactis RepID=Q6CR67_KLULA Length = 1087 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 102/567 (17%), Positives = 205/567 (36%), Gaps = 75/567 (13%) Query: 6 DPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARS-EHALVIAPTGSGKTLAAFLY 64 P S+LPD F+ +Q +++ RS E+ +V +PTGSGKT+ L Sbjct: 50 LPVSVLPDSAQCIF------PFENFNRMQTESFENIYRSNENCIVTSPTGSGKTVLFELA 103 Query: 65 ALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEV 124 L+ + R + + ++LYI+P K+L + + + Sbjct: 104 ILNAMNR--------LDRPSSVKVLYIAPTKSLCNEKYQQWKSKFIM------------- 142 Query: 125 NLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARE---TLRGVETVIIDEV 181 L VG+ T DT E K+ +I+I TPE ++ T + + + V++DE+ Sbjct: 143 -LSVGMLTSDTSFTELEKV--KAANIIICTPEKWDVI-TRKWTDYPQFFAILSLVLVDEI 198 Query: 182 HAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFL-----GGDRPVTVV 236 H + RG+ L + L R++++ + + + +SAT+ + D+A +L G + Sbjct: 199 HILQE-HRGSTLEVILTRMNSMCQ-NLRIVAVSATIPNIHDIADWLKTGGPTGVPAKVLA 256 Query: 237 NPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTI 296 + R +R V S + ++ + +++ ++++ + + + Sbjct: 257 FDDSYRQVVLRHHV-----------YSFYNKFNNEFQMDALFNTRLVELINKHSKGKPVL 305 Query: 297 VFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHH 356 +F +R + S S ++ HH Sbjct: 306 IFCPTRQSTIVTARHIALHDHEMNNTS--------SKRSNIKLQDKQLSEIAQKGIAFHH 357 Query: 357 GSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVAT--------PLSVAS 408 +S R++ E +G+++ + +TS+L +G+++ A ++I+ S Sbjct: 358 AGLSMTDRSVIEDKFTNGDIKVLCSTSTLAVGVNLPAYLVIIKGTRMWSINGSQEYSTLD 417 Query: 409 GLQRIGRAGHQVGGVSKGLFFPRTR--RDLVDSAVIVECMFAGRLE-NLTPPHNPLDVLA 465 LQ IGRAG ++ ++ + L NL L Sbjct: 418 ILQMIGRAGRPQFETEGTALILTDEGSQEKYENLLKGTSTLESCLHLNLAENIVAEIALN 477 Query: 466 QQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVF-DATLDMLSGRYPSGDFSAFRPKLV 524 T +AM+ L+ +Y R + + R + + + + Sbjct: 478 SITSIKSAMNWLKNTFFYRRYLKNPAHYSVIRSSILTSDAECQLTHFCERTLKDLLSYKI 537 Query: 525 WNRETGILTARPGAQ--LLAVTSGGTI 549 G L A Q G T+ Sbjct: 538 ILDNNGNLCASGYGQAMTRHYILGDTV 564 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.146 0.419 Lambda K H 0.267 0.0450 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,950,630,202 Number of Sequences: 3077464 Number of extensions: 408164844 Number of successful extensions: 1883385 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 8152 Number of HSP's successfully gapped in prelim test: 12300 Number of HSP's that attempted gapping in prelim test: 1778764 Number of HSP's gapped (non-prelim): 70737 length of query: 1538 length of database: 1,040,396,356 effective HSP length: 142 effective length of query: 1396 effective length of database: 603,396,468 effective search space: 842341469328 effective search space used: 842341469328 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 100 (43.0 bits)