15 c3rc8A_ Probab=100.00  E-value=0  Score=347.52  Aligned_columns=374  Identities=16%

Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHH
Q ss_conf             99861488899899999999976998999947885168999999999997321001112236688189998299898999
Q batch____        21 DWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTD  100 (1538)
Q Consensus        21 ~w~~~~~~~pt~~Q~~a~~~i~~g~~~li~apTGsGKTlaa~l~~l~~l~~~~~~~~~~~~~~~~~~~lyi~P~kaL~~q  100 (1538)
                      .+.+.......|.|.......++++++++++|||||||++++.++++                 +.+++|++|+|+|++|
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~gpTGSGKT~~al~~l~~-----------------~~~~i~~~P~r~La~q  171 (610)
T c3rc8A_         109 DDLRKISDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFS-----------------AKSGVYCGPLKLLAHE  171 (610)
T ss_dssp             HHHHHHTBCCCGGGGCHHHHTSCCEEEEEECSSSSSTTHHHHHHHHH-----------------SSSEEEEESSHHHHHH
T ss_pred             HHHHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH-----------------CCCEEEEECHHHHHHH
T ss_conf             57886543227021112332046962999845998747999999960-----------------8959998138899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCHHHCCEEEECC
Q ss_conf             99999998756566676404776780699998788888999996279989993948999998434784611042899216
Q batch____       101 VQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDE  180 (1538)
Q Consensus       101 ~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~Gdt~~~~~~~~~~~~~~IlvtTPe~l~~~L~~~~~~~l~~v~~vVvDE  180 (1538)
                      +++++++.                +++++..+|+.....+..  ...++|+|||||++         ..+.+++++||||
T Consensus       172 ~~~~~~~~----------------~~~v~l~tG~~~~~~~~~--~~~~~iiv~T~e~l---------~~~~~~~~iViDE  224 (610)
T c3rc8A_         172 IFEKSNAA----------------GVPCDLVTGEERVTVQPN--GKQASHVSCTVEMC---------SVTTPYEVAVIDE  224 (610)
T ss_dssp             HHHHHHHT----------------TCCEEEECSSCEECCSSS--SCCCSEEEEEGGGC---------CSSSEEEEEEEEC
T ss_pred             HHHHHHHC----------------CCCEEEEECCEEEEHHCC--CCCCCEEEECHHHH---------HHHCCCCEEEECC
T ss_conf             99999960----------------973068655012100011--58998999877784---------2303678147602


Q ss_pred             CCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHH
Q ss_conf             21110795189999999999986489984999967698889999971677873898336667643148960464200001
Q batch____       181 VHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSS  260 (1538)
Q Consensus       181 ~H~l~~~~rg~~l~~~l~rl~~~~~~~~~~iglSAT~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  260 (1538)
                      +|.+.+.+||..+...+.++   .....+++++|||+++.++++++++....+........-.............     
T Consensus       225 ~h~~~d~~Rg~~~~~~l~~~---~~~~~~l~~~sat~~~~~~l~~~~~~~~~v~~~~r~~~l~~~~~~~~~~~~~-----  296 (610)
T c3rc8A_         225 IQMIRDPARGWAWTRALLGL---CAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISVLDHALESLDNL-----  296 (610)
T ss_dssp             GGGGGCTTTHHHHHHHHHHC---EEEEEEEEECGGGHHHHHHHHHHHTCCEEEEECCCSSCEEECSSCCCSSTTC-----
T ss_pred             CCEECCCCCCHHHHHHHHCC---CCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEHHHHHHHHHC-----
T ss_conf             01002756117899998505---7866389997588204899999738975999569997016632166788733-----


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHH
Q ss_conf             11000011100101245899999999974318918998289799999999999865310122211000000000000000
Q batch____       261 VASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT  340 (1538)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvF~ntr~~ae~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (1538)
                                                     ..+++|||||++.|+.++..|+.                          
T Consensus       297 -------------------------------~~~~~I~~~s~~~~~~l~~~L~~--------------------------  319 (610)
T c3rc8A_         297 -------------------------------RPGDCIVCFSKNDIYSVSRQIEI--------------------------  319 (610)
T ss_dssp             -------------------------------CTTEEEECSSHHHHHHHHHHHHH--------------------------
T ss_pred             -------------------------------CCCCEEEECCHHHHHHHHHHHHH--------------------------
T ss_conf             -------------------------------89969997498999999999984--------------------------


Q ss_pred             HHHHHHCCCCEEEEECCCCCHHHHHHHHHHH--HCCCCCEEEEHHHHHHCCCCCCCCEEEEECC---CCCHHHHHHHHCC
Q ss_conf             1111110496289970898989999999999--5699989983328840497356768999588---9899899884122
Q batch____       341 SNRVQSSDVFIARSHHGSVSKEQRAITEQAL--KSGELRCVVATSSLELGIDMGAVDLVIQVAT---PLSVASGLQRIGR  415 (1538)
Q Consensus       341 ~~~~~~~~~~~v~~hHg~l~~~~R~~ve~~f--k~G~~~vlVaTs~le~GIDi~~vd~Vi~~~~---P~sv~~~lQR~GR  415 (1538)
                             .+.++.+|||+|+.++|..+++.|  ++|+++|||||+++++|||+| ++.||.++.   |.|.++|.|++||
T Consensus       320 -------~~~~v~~~hg~L~~~~R~~~~~~F~~~~g~~~vLVaT~~i~~Ginl~-i~~VI~~~~~k~~~s~~~~~Q~~GR  391 (610)
T c3rc8A_         320 -------RGLESAVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLS-IRRIIFYSLIKEPITTSQALQIAGR  391 (610)
T ss_dssp             -------TTCCEEEECTTSCHHHHHHHHHHHHCTTCSCCEEEECGGGGSSCCCC-BSEEEESCSBCCBCCHHHHHHHHTT
T ss_pred             -------CCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCC-CCEEEECCCCCCCCCHHHHHHHHCC
T ss_conf             -------49987998279998999999998662149852885267987534787-4658973873576898999984100


Q ss_pred             CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCHHHHHHHHHCCCCCCC
Q ss_conf             06789887238999689568888999999998089864437786364899999999856-89898999999731212058
Q batch____       416 AGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAM-DALQVDEWYSRVRRAAPWKD  494 (1538)
Q Consensus       416 aG~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~dvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  494 (1538)
                      |||..-....|+++.....|    ....+.++...+++  +....+..-.+++...... +.....++++.......+.+
T Consensus       392 AGR~G~~~~~G~v~~~~~~~----~~~~~~~~~~~~~~--i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  465 (610)
T c3rc8A_         392 AGRFSSRFKEGEVTTMNHED----LSLLKEILKRPVDP--IRAAGLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDG  465 (610)
T ss_dssp             BCCCTTTCCSEEEEESSHHH----HHHHHHHHTSCCCC--CCCEEECCCHHHHHHHHHHCTTSCHHHHHHHHHHHCBCCT
T ss_pred             CCCCCCCCCCEEEEEECHHH----HHHHHHHHCCCCCC--HHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCH
T ss_conf             48787654660799966023----89999985378710--2441057888999998830587778999987764236783


Q ss_pred             C----CHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             9----9899999999973677520011
Q batch____       495 L----PRRVFDATLDMLSGRYPSGDFS  517 (1538)
Q Consensus       495 l----~~~~~~~~~~~~~~~~~~~~~~  517 (1538)
                      .    .-+++..+..++.+...+....
T Consensus       466 ~~~~~~~~~~~~~~~~~~~~~l~~~~~  492 (610)
T c3rc8A_         466 QYFVCNMDDFKFSAELIQHIPLSLRVR  492 (610)
T ss_dssp             TEEECCCHHHHHHHHHTTTSCCCHHHH
T ss_pred             HHHHHCHHHHHHHHHHHCCCCCCHHHH
T ss_conf             666508688999997532367778998


