Phyre 2 alignment of P30015 with c3co5B_

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Job Description | P30015
Confidence | 85.26% | Date | Wed Jan 25 15:20:48 GMT 2012
Rank | 318 | Aligned Residues | 30
% Identity | 17% | Template | c3co5B_
PDB info | PDB header:transcription regulator | Chain: B: PDB Molecule:putative two-component system transcriptional response | PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae
Resolution | 2.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | V | Q | P | Q | T | W | H | V | A | A | R | S | E | H | A | L | V | I | A | P | T | G | S | G | K | T | L | A | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | E | X | N | R | E | V | E | A | A | A | K | R | T | S | P | V | F | L | T | G | E | A | G | S | P | F | E | T | V | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  | S | S |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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