Phyre 2 alignment of P30015 with c3qkuB_

Return to main results | Retrieve Phyre Job Id

Job Description | P30015
Confidence | 65.84% | Date | Wed Jan 25 15:20:48 GMT 2012
Rank | 434 | Aligned Residues | 20
% Identity | 50% | Template | c3qkuB_
PDB info | PDB header:replication | Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; | PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp
Resolution | 3.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 47 | . | . | 50 | . | . | . | . | . | . | . | . |  |  | . | 60 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Query Sequence |  | A | L | V | I | A | P | T | G | S | G | K | T | . | . | L | A | A | F | L | Y | A | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | L | I | I | G | Q | N | G | S | G | K | S | S | L | L | D | A | I | L | V | G | L
Template Known Secondary structure |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions