10 c1gm5A_ Probab=100.00  E-value=0  Score=364.54  Aligned_columns=318  Identities=20%

Q ss_pred             CHHHHHHHHCCCCCCCHHHHHHHHHHHCC------CCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
Q ss_conf             88999998614888998999999999769------989999478851689999999999973210011122366881899
Q batch____        16 SPATRDWFLRAFKQPTAVQPQTWHVAARS------EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRIL   89 (1538)
Q Consensus        16 ~p~~~~w~~~~~~~pt~~Q~~a~~~i~~g------~~~li~apTGsGKTlaa~l~~l~~l~~~~~~~~~~~~~~~~~~~l   89 (1538)
                      ++.++++...-=-++|+.|.+|++.|.+.      .|.|++++||||||++|+++++..+             ..|.+++
T Consensus       349 ~~~~~~f~~~lpF~LT~~Q~~ai~eI~~dl~~~~~m~rLLqgdtGSGKT~Va~lail~ai-------------~~G~qvl  415 (729)
T c1gm5A_         349 GKLAEEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNY-------------EAGFQTA  415 (729)
T ss_dssp             THHHHHHHHHSSSCCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHH-------------HHTSCEE
T ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH-------------HCCCEEE
T ss_conf             068998998578998989999999999986358973067750478721589999999999-------------6598099


Q ss_pred             EECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHC----CCCEEEECHHHHHHHHHCC
Q ss_conf             982998989999999999875656667640477678069999878888899999627----9989993948999998434
Q batch____        90 YISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRN----PPDILITTPESLYLMLTSR  165 (1538)
Q Consensus        90 yi~P~kaL~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~Gdt~~~~~~~~~~~----~~~IlvtTPe~l~~~L~~~  165 (1538)
                      |++||++|++|+++++++++...            ++++..++|+++.+++...+..    .++|+|+||+.|...+   
T Consensus       416 ilaPTr~LA~Q~~~~l~~~~~~~------------gi~V~lltG~~~~~~r~~~~~~i~~g~~~IvVgT~~lL~~~v---  480 (729)
T c1gm5A_         416 FMVPTSILAIQHYRRTVESFSKF------------NIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDV---  480 (729)
T ss_dssp             EECSCHHHHHHHHHHHHHHHTCS------------SCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCC---
T ss_pred             EEECCHHHHHHHHHHHHHHHCCC------------CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHC---
T ss_conf             99076999999999999960415------------974999988998889999998650379748985177887301---


Q ss_pred             CCCCHHHCCEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf             78461104289921621110795189999999999986489984999967698889999971677873898336667643
Q batch____       166 ARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQ  245 (1538)
Q Consensus       166 ~~~~l~~v~~vVvDE~H~l~~~~rg~~l~~~l~rl~~~~~~~~~~iglSAT~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  245 (1538)
                         .++++.+|||||+|.+....+              .+..+++++||||+.+......+.+......+...+..+...
T Consensus       481 ---~~~~l~lvVIDEaHrf~~l~~--------------~~~~~~iL~lSATPiprtla~~~~g~~~~s~i~e~p~~r~~i  543 (729)
T c1gm5A_         481 ---HFKNLGLVIIDEQHRFEALMN--------------KGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEV  543 (729)
T ss_dssp             ---CCSCCCEEEEESCCCCCCCCS--------------SSSCCCEEEEESSCCCHHHHHHHTCCSSCEEECCCCSSCCCC
T ss_pred             ---CCCCCCEEECCCHHHHHHHHH--------------CCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf             ---411366786061688899986--------------399886999945899899999972896369972058877772


Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             14896046420000111000011100101245899999999974318918998289799999999999865310122211
Q batch____       246 IRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPS  325 (1538)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvF~ntr~~ae~l~~~L~~~~~~~~~~~~~  325 (1538)
                      ....++                       .+....+...+.+.+.++.+++||||++..|+.++..|++....       
T Consensus       544 ~t~v~~-----------------------~~~~~~l~~~I~~~l~~g~qvLVF~~ti~~ae~la~~L~~~g~~-------  593 (729)
T c1gm5A_         544 QTMLVP-----------------------MDRVNEVYEFVRQEVMRGGQAFIVYPLIKSAVEMYEYLSKEVFK-------  593 (729)
T ss_dssp             EECCCC-----------------------SSTHHHHHHHHHHHTTTSCCBCCBCCCCCHHHHHHHSGGGSCCC-------
T ss_pred             EEEEEE-----------------------CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCC-------
T ss_conf             699972-----------------------22179999999998546993899948989999999999853997-------


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCEEEEECCCC-
Q ss_conf             0000000000000001111110496289970898989999999999569998998332884049735676899958898-
Q batch____       326 IAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPL-  404 (1538)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~hHg~l~~~~R~~ve~~fk~G~~~vlVaTs~le~GIDi~~vd~Vi~~~~P~-  404 (1538)
                                                +..|||+|+.++|..+++.|++|+++|||||+++|+|||||++++||+++++. 
T Consensus       594 --------------------------v~~lHG~ls~~eR~~il~~Fr~Gei~VLVATtvie~GIDvPnvt~vVi~~a~rf  647 (729)
T c1gm5A_         594 --------------------------LGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPRANVMVIENPERF  647 (729)
T ss_dssp             --------------------------BCCCCSSSCCSCSHHHHHHHTTTSSSBCCCSSCCCSCSCCTTCCEEEBCSCSSS
T ss_pred             --------------------------EEEEECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCEEEEECCCCC
T ss_conf             --------------------------899968999899999999997699989999227550378786647998578747


Q ss_pred             CHHHHHHHHCCCCCCCCCCCEEEEEECCHHH
Q ss_conf             9989988412206789887238999689568
Q batch____       405 SVASGLQRIGRAGHQVGGVSKGLFFPRTRRD  435 (1538)
Q Consensus       405 sv~~~lQR~GRaG~~~g~~~~~~~~~~~~~~  435 (1538)
                      +.+++.|..||+||. |..|.++++....++
T Consensus       648 glsqLhQlrGRvGR~-~~~g~ciL~~~~~~~  677 (729)
T c1gm5A_         648 GLAQLHQLRGRVGRG-GQEAYCFLVVGDVGE  677 (729)
T ss_dssp             CTTHHHHHHHTSCCS-STTCEEECCCCSCCH
T ss_pred             CHHHHHHHHHCCCCC-CCEEEEEEEECCCCH
T ss_conf             997876653034457-981499999569987


