61 d1s2ma1 Probab=99.97   E-value=1.1e-28  Score=208.57  Aligned_columns=199  Identities=19%

Q ss_pred             HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
Q ss_conf             43058899999861488899899999999976998999947885168999999999997321001112236688189998
Q batch____        12 PDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI   91 (1538)
Q Consensus        12 ~~~~~p~~~~w~~~~~~~pt~~Q~~a~~~i~~g~~~li~apTGsGKTlaa~l~~l~~l~~~~~~~~~~~~~~~~~~~lyi   91 (1538)
                      +.+-.+.++...+.+|.+|||+|.++|+.+++|+|++|++|||||||++|.+|++..+.......          +++|+
T Consensus         6 l~l~~~i~~~L~~~g~~~~~~iQ~~ai~~il~g~dvii~a~TGsGKTl~~~~~~l~~~~~~~~~~----------~~~~~   75 (206)
T d1s2ma1           6 FYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKI----------QALIM   75 (206)
T ss_dssp             GCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTSCSC----------CEEEE
T ss_pred             CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC----------CCCCC
T ss_conf             89988999999976898779899999999976998999953898704578999888530134543----------12335


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCHH
Q ss_conf             29989899999999998756566676404776780699998788888999996279989993948999998434784611
Q batch____        92 SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR  171 (1538)
Q Consensus        92 ~P~kaL~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~Gdt~~~~~~~~~~~~~~IlvtTPe~l~~~L~~~~~~~l~  171 (1538)
                      +|+++|++|++..+..+....            .+.+...+++++..+........++++++||+.+..++. +....+.
T Consensus        76 ~p~~~l~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~  142 (206)
T d1s2ma1          76 VPTRELALQTSQVVRTLGKHC------------GISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLAS-RKVADLS  142 (206)
T ss_dssp             CSSHHHHHHHHHHHHHHTTTT------------TCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHH-TTCSCCT
T ss_pred             CCCHHHHHHHHHHHHHHHCCC------------CCEEEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHH-HCCCCCC
T ss_conf             654888788999999962426------------861899995488479988510457616633589999997-2012211


Q ss_pred             HCCEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC--HHHHHHHHCCCCCEEEEE
Q ss_conf             042899216211107951899999999999864899849999676988--899999716778738983
Q batch____       172 GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRS--ASDVAAFLGGDRPVTVVN  237 (1538)
Q Consensus       172 ~v~~vVvDE~H~l~~~~rg~~l~~~l~rl~~~~~~~~~~iglSAT~~~--~~~~~~~l~~~~~~~i~~  237 (1538)
                      +++++|+||+|++.+.+|+.++..++.    .+++++|+|++|||+++  .+.+.+|+..+..+.+.+
T Consensus       143 ~l~~iViDE~d~~~~~~f~~~~~~i~~----~~~~~~q~v~~SAT~~~~v~~~~~~~l~~p~~V~~~~  206 (206)
T d1s2ma1         143 DCSLFIMDEADKMLSRDFKTIIEQILS----FLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLME  206 (206)
T ss_dssp             TCCEEEEESHHHHSSHHHHHHHHHHHT----TSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESCCC
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHH----HCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEC
T ss_conf             002777666676426587999999999----7498997999987899899999999779977998459