43 c1tf2A_ Probab=100.00  E-value=4.4e-34  Score=244.82  Aligned_columns=344  Identities=19%

Q ss_pred             HHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHH-HHHHHHHCCCCCCCCCCCCCCCE
Q ss_conf             31043058899999861488899899999999976998999947885168999999-99999732100111223668818
Q batch____         9 SLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLY-ALDRLFREGGEDTREAHKRKTSR   87 (1538)
Q Consensus         9 ~~~~~~~~p~~~~w~~~~~~~pt~~Q~~a~~~i~~g~~~li~apTGsGKTlaa~l~-~l~~l~~~~~~~~~~~~~~~~~~   87 (1538)
                      +.+++.|.-....-++..+-+|+++|..++.++++|+  |..+.||+|||+++.|| ++..|              .|..
T Consensus        55 ~~l~e~fA~vrEa~~R~~g~rp~~vQ~i~~~~L~~G~--Iaem~TGeGKTL~~~Lpa~l~aL--------------~G~~  118 (772)
T c1tf2A_          55 DLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNAL--------------TGKG  118 (772)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHT--------------TSSC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC--EEEECCCCCHHHHHHHHHHHHHH--------------CCCC
T ss_conf             6789999999999987508888737999999984898--89997898768999999999971--------------7995


Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHH------H
Q ss_conf             9998299898999999999987565666764047767806999987888889999962799899939489999------9
Q batch____        88 ILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYL------M  161 (1538)
Q Consensus        88 ~lyi~P~kaL~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~Gdt~~~~~~~~~~~~~~IlvtTPe~l~~------~  161 (1538)
                      |.+|+|++.|+.|.++.+..++..+            +++|++.+|+.+..++......  ||+++||..+..      +
T Consensus       119 V~IvT~n~yLA~RD~e~~~~l~~~L------------GL~v~~i~~~~~~~~r~~~y~~--dI~y~T~~~l~fD~Lrd~~  184 (772)
T c1tf2A_         119 VHVVTVNEYLASRDAEQMGKIFEFL------------GLTVGLNLNSMSKDEKREAYAA--DITYSTNNELGFDYLRDNM  184 (772)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHHHHT------------TCCEEECCTTCCHHHHHHHTTS--SEEEEEHHHHHHHHHHHTT
T ss_pred             EEEEECCHHHHHHHHHHHHHHHHHH------------CCEEEEEECCCCHHHHHHHCCC--CEEEECHHHHHHHHHHHHH
T ss_conf             2998269899999999999998673------------9548985089998999984149--9699638998887878753


Q ss_pred             HHCCCCCCHHHCCEEEECCCCHHC----------------CCCHHHHHHHHHHH--------------------------
Q ss_conf             843478461104289921621110----------------79518999999999--------------------------
Q batch____       162 LTSRARETLRGVETVIIDEVHAVA----------------GSKRGAHLALSLER--------------------------  199 (1538)
Q Consensus       162 L~~~~~~~l~~v~~vVvDE~H~l~----------------~~~rg~~l~~~l~r--------------------------  199 (1538)
                      ..++....++++.++||||++.++                ..........++.+                          
T Consensus       185 ~~~~~~lv~r~~~~~IiDEvDsiLiDea~tpliisg~~~~~~~~y~~~~~iv~~L~~~~~~~~d~~~~~v~lt~~g~~~~  264 (772)
T c1tf2A_         185 VLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKA  264 (772)
T ss_dssp             CSSGGGCCCCCCCEEEEETHHHHHTTSTTCEEEEECSSCCCCHHHHHHHHHHTTCCSSSSEEECSSSCCEEECHHHHHHH
T ss_pred             HCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCEEEECHHHHHHH
T ss_conf             12500001367866760115677663045620003777540028999999998501357720201452579876789999


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q batch____       200 --------------------------------------------------------------------------------  199 (1538)
Q Consensus       200 --------------------------------------------------------------------------------  199 (1538)
                                                                                                      
T Consensus       265 e~~~~~~~l~~~~~~~~~~~i~~al~A~~l~~~d~~YiV~~~~I~ivd~~tgr~~~~r~~~~glhQ~ieake~v~i~~e~  344 (772)
T c1tf2A_         265 EKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNES  344 (772)
T ss_dssp             HHHTTCSCSSSGGGHHHHHHHHHHHHHHHTCCBTTTEEEETTEEEEBCTTTCCBCTTCCCTTTHHHHHHHHTTCCCCCCC
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf             97618543357223348899999999988621786428538938883165785345642102478999987378478543


Q ss_pred             -------HHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             -------9986489984999967698889999971677873898336667643148960464200001110000111001
Q batch____       200 -------LDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAG  272 (1538)
Q Consensus       200 -------l~~~~~~~~~~iglSAT~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (1538)
                             ...+...-..+.|||.|.+...+....+.+...+.|.........+....+                    ..
T Consensus       345 ~t~asis~q~~f~~Y~kl~GmTGTa~te~~e~~~~Y~l~vv~IPt~k~~~r~~~~d~i--------------------~~  404 (772)
T c1tf2A_         345 MTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLI--------------------YR  404 (772)
T ss_dssp             CEEEEEEHHHHHTTSSEEEEEESCCGGGHHHHHHHHCCCEEECCCSSCCCCEECCCEE--------------------ES
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCEE--------------------EE
T ss_conf             1122000467875335541456542779999998719846982787611001347616--------------------44


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCEE
Q ss_conf             01245899999999974318918998289799999999999865310122211000000000000000111111049628
Q batch____       273 REGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIA  352 (1538)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~lvF~ntr~~ae~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  352 (1538)
                      .....+..+...+.+....++++||||+|...++.+...|.                                 ..+++.
T Consensus       405 ~~~~K~~aI~~~i~~~~~~grpVLVft~si~~se~ls~~L~---------------------------------~~gi~~  451 (772)
T c1tf2A_         405 TMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLK---------------------------------NKGIPH  451 (772)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHH---------------------------------TTTCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHH---------------------------------HCCCCE
T ss_conf             88999999999999986308918999623899999999998---------------------------------669916


Q ss_pred             EEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCC---CCCC-----EEEEECCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             997089898999999999956999899833288404973---5676-----89995889899899884122067898872
Q batch____       353 RSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDM---GAVD-----LVIQVATPLSVASGLQRIGRAGHQVGGVS  424 (1538)
Q Consensus       353 ~~hHg~l~~~~R~~ve~~fk~G~~~vlVaTs~le~GIDi---~~vd-----~Vi~~~~P~sv~~~lQR~GRaG~~~g~~~  424 (1538)
                      .+.|+..+..+++.|.+.++.|  .|+|||+.+.+|+||   ++|.     +||+...|.|..-..|..|||||+ |.+.
T Consensus       452 ~vLna~~~~~E~~ii~~Ag~~g--~VtIATnmAGRGtDI~l~~~V~~~GGLhVI~t~~~~s~rid~Ql~GRagRq-GdpG  528 (772)
T c1tf2A_         452 QVLNAKNHEREAQIIEEAGQKG--AVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQ-GDPG  528 (772)
T ss_dssp             EEECSSSHHHHHHHHHTSSSTT--CEEEEETTSSTTCCCCCCTTCGGGTSEEEEESSCCSSHHHHHHHHTTSSCS-SCCE
T ss_pred             EEECCCCCHHHHHHHHHCCCCC--CEEEEHHHHHCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCC
T ss_conf             9961675536889998427998--389870132068676357237731982899514886678898865344205-7887


Q ss_pred             EEEEEECCHHHHHH
Q ss_conf             38999689568888
Q batch____       425 KGLFFPRTRRDLVD  438 (1538)
Q Consensus       425 ~~~~~~~~~~~~~~  438 (1538)
                      ...+|..-.||++.
T Consensus       529 ss~~~lsled~l~~  542 (772)
T c1tf2A_         529 ITQFYLSMEDELMR  542 (772)
T ss_dssp             EEEEEEETTSSGGG
T ss_pred             CEEEEEEHHHHHHH
T ss_conf             17999740033775