19 c1s2mA_ Probab=100.00  E-value=3.5e-42  Score=299.06  Aligned_columns=341  Identities=23%

Q ss_pred             HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
Q ss_conf             43058899999861488899899999999976998999947885168999999999997321001112236688189998
Q batch____        12 PDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYI   91 (1538)
Q Consensus        12 ~~~~~p~~~~w~~~~~~~pt~~Q~~a~~~i~~g~~~li~apTGsGKTlaa~l~~l~~l~~~~~~~~~~~~~~~~~~~lyi   91 (1538)
                      +.+-.++.+...+.+|..|+|+|.++|++|++|+|++|+||||||||++|++|+++.+....          .+.++||+
T Consensus         6 l~l~~~i~~~l~~~g~~~~~~~Q~~ai~~il~~~~vii~apTGsGKT~~~~l~~l~~l~~~~----------~~~~~iii   75 (377)
T c1s2mA_           6 FYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKL----------NKIQALIM   75 (377)
T ss_dssp             GCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTS----------CSCCEEEE
T ss_pred             CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC----------CCCEEEEE
T ss_conf             79988999999977799879899999999975998999927998678999999999985046----------88289998


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCHH
Q ss_conf             29989899999999998756566676404776780699998788888999996279989993948999998434784611
Q batch____        92 SPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLR  171 (1538)
Q Consensus        92 ~P~kaL~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~Gdt~~~~~~~~~~~~~~IlvtTPe~l~~~L~~~~~~~l~  171 (1538)
                      +|+++|++|+++.+++++...            ...+...+++.+.............+.+++++.+..... .....+.
T Consensus        76 ~p~~~l~~q~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~  142 (377)
T c1s2mA_          76 VPTRELALQTSQVVRTLGKHC------------GISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLAS-RKVADLS  142 (377)
T ss_dssp             CSSHHHHHHHHHHHHHHTTTT------------TCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHH-TTCSCCT
T ss_pred             ECHHHHHHHHHHHHHHHHHHC------------CCCEEEEEECCCHHHHHHHHCCCCCEEEEEHHHHHHHHH-HHHCCCC
T ss_conf             473898799999999973103------------771599981787378777520357502320388876432-0000011


Q ss_pred             HCCEEEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEC
Q ss_conf             04289921621110795189999999999986489984999967698889999971677873898336667643148960
Q batch____       172 GVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVP  251 (1538)
Q Consensus       172 ~v~~vVvDE~H~l~~~~rg~~l~~~l~rl~~~~~~~~~~iglSAT~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  251 (1538)
                      .+.++++||.|.+.    .....................+..++|..+...............+..............+.
T Consensus       143 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (377)
T c1s2mA_         143 DCSLFIMDEADKML----SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYA  218 (377)
T ss_dssp             TCCEEEEESHHHHS----SHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESCCSSCBCTTEEEEEE
T ss_pred             EEEEEEECCCEEEC----CCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEE
T ss_conf             00022202202441----33221023456641145750563112122002466652156651476401356555259999


Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             46420000111000011100101245899999999974318918998289799999999999865310122211000000
Q batch____       252 VANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAA  331 (1538)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvF~ntr~~ae~l~~~L~~~~~~~~~~~~~~~~~~~  331 (1538)
                      .........                     .............+++|+++...++............             
T Consensus       219 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  264 (377)
T c1s2mA_         219 FVEERQKLH---------------------CLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYS-------------  264 (377)
T ss_dssp             ECCGGGHHH---------------------HHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHTCC-------------
T ss_pred             ECCCHHHHH---------------------HHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC-------------
T ss_conf             706035567---------------------8874200134522688623011246778754210133-------------


Q ss_pred             HHHHCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf             00000000011111104962899708989899999999995699989983328840497356768999588989989988
Q batch____       332 HFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQ  411 (1538)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~v~~hHg~l~~~~R~~ve~~fk~G~~~vlVaTs~le~GIDi~~vd~Vi~~~~P~sv~~~lQ  411 (1538)
                                          +..+|++++.+++..++..|+.|+.+++|||+++++|||+|+|++||++++|.|+.+|+|
T Consensus       265 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~vlv~T~~~~~GiDip~v~~VI~~~~p~s~~~~~Q  324 (377)
T c1s2mA_         265 --------------------CYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLH  324 (377)
T ss_dssp             --------------------EEEECTTSCHHHHHHHHHHHHTTSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHH
T ss_pred             --------------------CCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHCCCCCCCCCEEEECCCCCCHHHHHH
T ss_conf             --------------------222245642012100000011221134310230112356467638998088879989988


Q ss_pred             HHCCCCCCCCCCCEEEEEECCHH
Q ss_conf             41220678988723899968956
Q batch____       412 RIGRAGHQVGGVSKGLFFPRTRR  434 (1538)
Q Consensus       412 R~GRaG~~~g~~~~~~~~~~~~~  434 (1538)
                      |+||+||. |..++.++|....+
T Consensus       325 r~GRagR~-g~~g~~i~~~~~~d  346 (377)
T c1s2mA_         325 RIGRSGRF-GHLGLAINLINWND  346 (377)
T ss_dssp             HHCBSSCT-TCCEEEEEEECGGG
T ss_pred             HHHCCCCC-CCCEEEEEEECHHH
T ss_conf             62102368-88259999878889