BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (74 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 155 4e-37 UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 144 1e-33 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 137 1e-31 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 105 3e-22 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 103 2e-21 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 101 9e-21 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 100 2e-20 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 97 2e-19 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 96 3e-19 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 96 4e-19 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 93 2e-18 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 91 2e-17 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 89 5e-17 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 88 9e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 86 4e-16 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 85 8e-16 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 83 3e-15 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 82 6e-15 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 81 9e-15 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 80 2e-14 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 80 2e-14 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 78 1e-13 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 77 1e-13 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 77 2e-13 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 76 4e-13 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 76 4e-13 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 76 4e-13 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 75 6e-13 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 75 7e-13 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 75 8e-13 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 75 8e-13 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 74 1e-12 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 74 1e-12 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 74 1e-12 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 74 1e-12 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 74 2e-12 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 74 2e-12 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 74 2e-12 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 73 3e-12 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 73 3e-12 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 73 3e-12 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 73 3e-12 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 73 3e-12 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 73 4e-12 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 73 4e-12 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 72 4e-12 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 72 6e-12 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 72 7e-12 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 72 7e-12 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 72 7e-12 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 72 8e-12 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 72 8e-12 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 72 8e-12 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 71 9e-12 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 71 1e-11 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 71 1e-11 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 71 1e-11 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 71 1e-11 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 70 1e-11 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 70 2e-11 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 70 2e-11 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 70 2e-11 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 70 2e-11 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 70 3e-11 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 69 4e-11 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 69 4e-11 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 69 6e-11 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 69 6e-11 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 69 6e-11 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 69 7e-11 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 68 1e-10 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 67 1e-10 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 67 2e-10 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 67 2e-10 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 67 2e-10 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 67 2e-10 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 67 3e-10 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 66 3e-10 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 66 3e-10 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 66 3e-10 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 66 4e-10 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 65 5e-10 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 65 5e-10 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 65 6e-10 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 65 8e-10 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 65 1e-09 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 64 1e-09 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 64 1e-09 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 64 1e-09 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 64 2e-09 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 64 2e-09 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 64 2e-09 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 64 2e-09 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 63 3e-09 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 63 4e-09 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 63 4e-09 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 62 5e-09 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 62 5e-09 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 62 5e-09 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 62 6e-09 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 62 6e-09 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 62 7e-09 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 62 7e-09 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 61 9e-09 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 61 1e-08 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 61 1e-08 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 60 2e-08 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 60 2e-08 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 60 2e-08 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 60 2e-08 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 60 2e-08 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 60 2e-08 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 60 2e-08 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 60 3e-08 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 59 3e-08 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 59 4e-08 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 59 4e-08 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 59 5e-08 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 59 5e-08 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 59 6e-08 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 59 6e-08 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 58 8e-08 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 58 9e-08 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 58 1e-07 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 57 1e-07 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 57 2e-07 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 57 2e-07 UniRef50_A0PKE1 DNA-binding protein n=2 Tax=Mycobacterium RepID=... 57 2e-07 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 57 2e-07 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 56 3e-07 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 56 3e-07 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 56 3e-07 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 56 3e-07 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 56 4e-07 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 56 4e-07 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 56 4e-07 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 55 5e-07 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 55 6e-07 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 55 6e-07 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 55 6e-07 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 55 6e-07 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 55 6e-07 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 55 6e-07 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 55 8e-07 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 55 8e-07 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 55 8e-07 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 55 9e-07 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 55 9e-07 UniRef50_Q0C0S6 Cold shock DNA-binding protein n=1 Tax=Hyphomona... 55 9e-07 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 55 9e-07 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 54 1e-06 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 54 1e-06 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 54 1e-06 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 54 1e-06 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 54 1e-06 UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornu... 54 1e-06 UniRef50_Q5GRS9 Cold shock protein n=7 Tax=Wolbachia RepID=Q5GRS... 54 1e-06 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 54 1e-06 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 54 1e-06 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 54 2e-06 UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Ba... 54 2e-06 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 54 2e-06 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 54 2e-06 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 54 2e-06 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 54 2e-06 UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cel... 54 2e-06 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 53 2e-06 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 53 2e-06 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 53 3e-06 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 53 3e-06 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 53 3e-06 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 53 3e-06 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 53 4e-06 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 53 4e-06 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 53 4e-06 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 53 4e-06 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 53 4e-06 UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hi... 52 4e-06 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 52 5e-06 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 52 5e-06 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 52 5e-06 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 52 6e-06 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 52 6e-06 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 52 6e-06 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 52 6e-06 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 52 7e-06 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 52 7e-06 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 52 8e-06 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 52 8e-06 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 52 8e-06 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 52 8e-06 UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus Re... 52 9e-06 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 51 9e-06 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 51 9e-06 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 51 9e-06 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 51 1e-05 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 51 1e-05 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 51 1e-05 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 51 1e-05 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 51 1e-05 UniRef50_A6FNL2 Cold shock DNA-binding domain protein n=2 Tax=Rh... 51 1e-05 UniRef50_C0N6M9 Putative uncharacterized protein n=1 Tax=Methylo... 51 1e-05 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 50 2e-05 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 50 2e-05 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 50 2e-05 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 50 2e-05 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 50 2e-05 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 50 2e-05 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 50 2e-05 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 50 3e-05 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 50 3e-05 UniRef50_A3S070 Cold shock protein n=1 Tax=Ralstonia solanacearu... 50 3e-05 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 50 3e-05 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 49 3e-05 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 49 4e-05 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 49 4e-05 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 49 4e-05 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 49 4e-05 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 49 4e-05 UniRef50_A8L691 Cold-shock DNA-binding domain protein n=2 Tax=Fr... 49 5e-05 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 49 5e-05 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 49 6e-05 UniRef50_Q2MF47 Putative cold shock protein n=1 Tax=Streptomyces... 49 6e-05 UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella parame... 49 6e-05 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 49 6e-05 UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=La... 49 7e-05 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 49 7e-05 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 49 7e-05 UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zy... 48 8e-05 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 48 8e-05 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 48 9e-05 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 48 1e-04 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 48 1e-04 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 47 2e-04 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 47 2e-04 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 47 2e-04 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 47 2e-04 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 47 2e-04 UniRef50_C8XGY3 Cold-shock DNA-binding domain protein n=1 Tax=Na... 47 2e-04 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 47 2e-04 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 47 2e-04 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 47 2e-04 UniRef50_UPI0001AEE83B putative DNA binding protein n=2 Tax=Stre... 47 2e-04 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 47 2e-04 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 47 3e-04 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 47 3e-04 UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=B... 47 3e-04 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 47 3e-04 UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Ac... 46 3e-04 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 46 3e-04 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 74/74 (100%), Positives = 74/74 (100%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH Sbjct: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 Query: 61 ASVIVPVEVEAAVA 74 ASVIVPVEVEAAVA Sbjct: 61 ASVIVPVEVEAAVA 74 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 67/74 (90%), Positives = 69/74 (93%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQ V+FDVHQGPKGNH Sbjct: 24 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNH 83 Query: 61 ASVIVPVEVEAAVA 74 ASVIVP+E E A A Sbjct: 84 ASVIVPLEAEVAPA 97 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 62/73 (84%), Positives = 67/73 (91%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQ V FDVHQGPKGNH Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNH 60 Query: 61 ASVIVPVEVEAAV 73 AS+IVP+ ++ + Sbjct: 61 ASLIVPLGLDVVL 73 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 50/64 (78%), Positives = 53/64 (82%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNNAKGFGFI PE GGEDIFAHYSTIQM+GYR+LKAGQ V F+V QGPKG H Sbjct: 1 MAVGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLH 60 Query: 61 ASVI 64 A I Sbjct: 61 AENI 64 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 46/66 (69%), Positives = 54/66 (81%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNNAKG+GFI +GG ED+FAHYS IQM+GYRTLKAGQ+V F++ QGPKG H Sbjct: 7 MLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLH 66 Query: 61 ASVIVP 66 A+ I P Sbjct: 67 ATDIRP 72 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 46/67 (68%), Positives = 53/67 (79%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME G VKWFNNAKGFGFI EG DIFAHYS I+MDGYR+LKAGQ VQF+V KG+H Sbjct: 1 MEIGIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSH 60 Query: 61 ASVIVPV 67 A+ I+P+ Sbjct: 61 ATKIIPI 67 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 46/71 (64%), Positives = 53/71 (74%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI PEGGGED+FAH+S I MDG+RTLK G V F++ GPKG Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 61 ASVIVPVEVEA 71 A I P+E A Sbjct: 61 AQNIAPLESRA 71 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 42/64 (65%), Positives = 52/64 (81%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTVKWFN++KGFGFI P+ GGED+FAH+S I M+G++TLK GQ V F+V QGPKG Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 61 ASVI 64 AS I Sbjct: 61 ASNI 64 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/71 (61%), Positives = 54/71 (76%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFNNAKG+GFI +G +D+FAH+S++QMDGY+TLKAGQ+V FD KG H Sbjct: 1 MPRGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVH 60 Query: 61 ASVIVPVEVEA 71 A IVP EV A Sbjct: 61 AINIVPDEVPA 71 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 7/79 (8%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFNNAKG+GFI + GGED+FAHYS I MDGY+TLKAGQ V F++ +G KG H Sbjct: 42 MPTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLH 101 Query: 61 A-------SVIVPVEVEAA 72 A S+I P ++ A Sbjct: 102 AINIVAPQSIIKPSKIRDA 120 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 41/64 (64%), Positives = 50/64 (78%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI +GGGED+F H++ I MDG+RTL+ GQ VQFDV +GPKG Sbjct: 34 MATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQ 93 Query: 61 ASVI 64 A + Sbjct: 94 AQNV 97 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 40/74 (54%), Positives = 54/74 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VKWFN+AKGFGFI P+ GG+D+FAH+S I+ DG+++L+ Q VQF+V GPKG Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 61 ASVIVPVEVEAAVA 74 A+ I P+ A A Sbjct: 78 AANITPLXALTAGA 91 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 38/67 (56%), Positives = 49/67 (73%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN++KGFGFI P+ GG+D+FAH+S I G+R+L Q V FD+ +GPKG Sbjct: 44 MATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQ 103 Query: 61 ASVIVPV 67 AS I P+ Sbjct: 104 ASNIQPI 110 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 41/66 (62%), Positives = 48/66 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFNNAKG+GFI E ED+F HYS+I +DGY+TLKAGQSV F G +G H Sbjct: 1 MHHGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLH 60 Query: 61 ASVIVP 66 A I+P Sbjct: 61 AVDIMP 66 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 43/69 (62%), Positives = 50/69 (72%), Gaps = 1/69 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEG-GGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M +G VKWFNNAKGFGFI EG ED+F H+S I+MDGY+TLKAGQ V+F+V GPKG Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 60 HASVIVPVE 68 A I E Sbjct: 61 QAIKINSSE 69 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 41/68 (60%), Positives = 46/68 (67%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI +GGG D+FAH+S I DGYR L+ GQ V F+V QG KG Sbjct: 1 MTDGTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQ 60 Query: 61 ASVIVPVE 68 A IVP Sbjct: 61 AVNIVPAR 68 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/67 (55%), Positives = 47/67 (70%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI + GG D+F H++ IQ DG+RTL GQ V+F+ +GPKG Sbjct: 1 MATGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQ 60 Query: 61 ASVIVPV 67 A + V Sbjct: 61 AENVRVV 67 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 34/65 (52%), Positives = 48/65 (73%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KGFGFI P+GGG+D+F H+ I+ DG+++LK GQ+V F +G KG A Sbjct: 26 QTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQA 85 Query: 62 SVIVP 66 + + P Sbjct: 86 AQVRP 90 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 81.3 bits (199), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 51/67 (76%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN++KGFGFI P+ GG+D+FAH+S +Q +G+++L+ GQ V++ G KG Sbjct: 60 METGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPA 119 Query: 61 ASVIVPV 67 A+ I P+ Sbjct: 120 ATKIEPI 126 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/66 (59%), Positives = 43/66 (65%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KGFGFI +GGG D+FAHYS I G+R L GQ V FD+ QG KG Sbjct: 1 MASGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPT 60 Query: 61 ASVIVP 66 A IVP Sbjct: 61 AENIVP 66 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 47/65 (72%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V+F++ G KG A+ Sbjct: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 Query: 63 VIVPV 67 ++ + Sbjct: 65 NVIAL 69 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 44/64 (68%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI P+ G +D+FAHYS I +GY++L+ Q V F+V QGPKG Sbjct: 1 MATGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPS 60 Query: 61 ASVI 64 A I Sbjct: 61 AKNI 64 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQM-DGYRTLKAGQSVQFDVHQGPKGN 59 M TVKWF+ KG+GFI GED+F HYS IQ D ++TLK+ Q V+F+++ GPKG Sbjct: 1 MRTSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGL 60 Query: 60 HASVIVPVEVEAA 72 HA + P++ E A Sbjct: 61 HALEVAPLDDEEA 73 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWFN++KGFGFI + G EDIF H+ IQ DGYR+LK G+ V+F V +G KG A Sbjct: 5 EQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGLQA 63 Query: 62 SVIVPVE 68 + VE Sbjct: 64 EEVRRVE 70 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 45/67 (67%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + G VKWF+N +GFGFI P+ G ++FAH+ I M+GY+TLK Q V +DV G G HA Sbjct: 3 DTGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHA 62 Query: 62 SVIVPVE 68 I+P E Sbjct: 63 VNIIPGE 69 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQGPKGNH 60 +G VKWF+ KG+GFI GG DIF HYS I + ++TL+ GQ V+F++H+GPKG H Sbjct: 4 RRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLH 63 Query: 61 ASVIVPVE 68 A +VP++ Sbjct: 64 ARNVVPLD 71 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 34/63 (53%), Positives = 43/63 (68%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWF+ KGFGFI P+ GGED+F H S+++ DGYR+L G V+F V G G + Sbjct: 7 KGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRTKA 66 Query: 63 VIV 65 V V Sbjct: 67 VNV 69 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME+GTVKWFN KGFGFI E G +D+F H+S IQ DG+++L GQ+V FDV +G +G Sbjct: 1 MEQGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQ 59 Query: 61 ASVI 64 A+ + Sbjct: 60 AANV 63 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 41/62 (66%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN KGFGFI P+ G +D+F H+S IQ + +RTL Q V+F QGPKG A Sbjct: 7 GLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGPSAVN 66 Query: 64 IV 65 +V Sbjct: 67 VV 68 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 36/71 (50%), Positives = 49/71 (69%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWF++ KGFGFI P+ GGED+F H S I+ +G+R+L G++V+F+V G G + Sbjct: 10 KGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRTKA 69 Query: 63 VIVPVEVEAAV 73 V V AAV Sbjct: 70 VDVTGPDGAAV 80 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E G VKWFN AKG+GFI GED+F H+S IQ GY+TL G++V+F+ QGPKG +A Sbjct: 22 ENGVVKWFNGAKGYGFI-QRSTGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLNA 80 Query: 62 SVIV 65 + +V Sbjct: 81 ANVV 84 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/64 (59%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G+VKWFN AKGFGFI E G D+FAH+S I DG++TL GQ VQF V QG KG A Sbjct: 6 GSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAEN 64 Query: 64 IVPV 67 IV + Sbjct: 65 IVCI 68 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ+V+F++ G KG A Sbjct: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 Query: 63 VIVPV 67 + + Sbjct: 65 NVTAI 69 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWFNN KG+GFI E G +D+F HYS + M+G+++L+ G V+FDV +G KG A+ Sbjct: 21 KGTVKWFNNQKGYGFISDESG-KDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQAT 79 Query: 63 VIVPV 67 + + Sbjct: 80 NVTKL 84 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +KGTVKWFN+ KG+GFI PE G D+F H+ I+ +G+++LK GQ V F+ QG KG A Sbjct: 101 QKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQA 159 Query: 62 SVIVPV 67 + PV Sbjct: 160 DKVQPV 165 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 8/73 (10%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAH--------YSTIQMDGYRTLKAGQSVQFDVHQG 55 GT KWFN KG+GFI P+ GG+D+F H S + MDG+R+L AG+ V+F + + Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 56 PKGNHASVIVPVE 68 P+GN A+ +V E Sbjct: 71 PEGNEATAVVSAE 83 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 44/62 (70%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKWF+ KGFGFI P+ GGED+F H ++I+ DG+RTL G++V+F V G G +V Sbjct: 9 GTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRTKAV 68 Query: 64 IV 65 V Sbjct: 69 EV 70 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 1/62 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VK+FN KG+GFI EGG +DIF HYS I DGY+TL+ GQ V F+V +GP+G Sbjct: 1 MSTGKVKFFNAEKGYGFITIEGG-QDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQ 59 Query: 61 AS 62 A+ Sbjct: 60 AA 61 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 31/62 (50%), Positives = 44/62 (70%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKWFN+ KGFGFI P+ GG+D+F H S+I+ +G+R+L G++V+F V G +V Sbjct: 6 GTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGRTKAV 65 Query: 64 IV 65 V Sbjct: 66 DV 67 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 43/67 (64%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTVKWFN KGFGFI P+ D+F HYS IQ G++TL VQF++ QG KG Sbjct: 1 MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQ 60 Query: 61 ASVIVPV 67 A+ + V Sbjct: 61 ATGVTLV 67 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN KGFGFI E G D+F H+S IQ DG+++L GQ+V FDV + +G Sbjct: 1 MEHGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQ 59 Query: 61 A 61 A Sbjct: 60 A 60 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M++GTVKWFN KGFGFI EG D+F H+S I +GY++L+ GQSV+F+V +G +G Sbjct: 1 MKQGTVKWFNAEKGFGFIEVEGEN-DVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQ 59 Query: 61 ASVIVPV 67 A+ +V + Sbjct: 60 AANVVKL 66 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTVKWFN KG+GFI E G D+F H+S IQ DG++TL+ GQ V FD +G Sbjct: 1 MKNGTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQ 59 Query: 61 ASVIVP 66 A+ +VP Sbjct: 60 AANVVP 65 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 40/62 (64%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 7 GLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAAN 66 Query: 64 IV 65 ++ Sbjct: 67 VI 68 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF++ KG+GFI + GG D+F H+S I+M+G++TLK GQ V+F++ +G KG A+ Sbjct: 2 RGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQAA 60 Query: 63 VIVPVE 68 + VE Sbjct: 61 HVKVVE 66 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWFN KGFGFI E G +D+F H+S IQ DGY++L+ GQ V+FD+ G +G A+ Sbjct: 2 QGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQAA 60 Query: 63 VIVPV 67 +V + Sbjct: 61 NVVKL 65 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWFN KG+GFI E G +D+F H+S I M+GY+TL GQ V+FDV + +GN A Sbjct: 2 RGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQAV 60 Query: 63 VIVPVE 68 + V+ Sbjct: 61 NVRKVK 66 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI +GGG D+F HYS I G+R+L+ Q V FDV G +G Sbjct: 1 MATGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHG-EGPQ 59 Query: 61 ASVIVP 66 A + P Sbjct: 60 AENVSP 65 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWFN +KGFGFI + G +D+F H+ I+ +G+R L GQ V+F + KG A Sbjct: 175 EAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQA 233 Query: 62 SVIVPVE 68 +VPVE Sbjct: 234 EDVVPVE 240 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 44/64 (68%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 + +G KWFN+ KGFGF+ P+ GG+D+F H I+ DG+R+L+ + V+F H+ KG Sbjct: 70 VRQGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLE 129 Query: 61 ASVI 64 A+++ Sbjct: 130 ATLV 133 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VKWFN+ KGFGFI EGG +D+F H+S IQ DG++TL+ GQ V F++ +G +G Sbjct: 1 MQTGKVKWFNSEKGFGFIEVEGG-DDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 61 ASVIV 65 A+ + Sbjct: 60 AANVT 64 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 43/64 (67%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KGFGFI P G +D+F H+S IQ + Y+TL GQ+V+F + QG KG A Sbjct: 7 GLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPSAVN 66 Query: 64 IVPV 67 +V + Sbjct: 67 VVAL 70 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNN KG+GFI E G +D+F H+S I DGYR L G+ V++++ +GPKG Sbjct: 1 MPTGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLF 59 Query: 61 ASVI 64 A+ + Sbjct: 60 AAQV 63 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN KG+GFI E G D+F H+S IQ DGY+TL+ GQ+V F+V +G Sbjct: 1 MEHGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQ 59 Query: 61 A 61 A Sbjct: 60 A 60 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWFN+AKG+GFI G G D+F HY I+ DG+R+L GQ V+F V QG KG A Sbjct: 72 ETGTVKWFNDAKGYGFI-QRGNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQA 130 Query: 62 SVIV 65 + Sbjct: 131 EDVA 134 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 30/60 (50%), Positives = 42/60 (70%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWF+ KG+GFI E D+F H++ IQM+G++TL+ GQ V+FDV + KG A Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAK 63 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 39/63 (61%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+GG +D+F H S ++ G L Q V FD+ G G Sbjct: 53 MATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGRE 112 Query: 61 ASV 63 A+V Sbjct: 113 AAV 115 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI E G +D+F HYS+I +G++TL+ GQ+V +DV + +G Sbjct: 21 MSTGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQ 79 Query: 61 ASVIVPVEVEA 71 A+ + V+ A Sbjct: 80 ANNVTVVDTAA 90 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 42/67 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KG+GFI PE D+F H+S IQ +G++ L+ V+F+ GPKG Sbjct: 1 MAVGTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQ 60 Query: 61 ASVIVPV 67 A+ + + Sbjct: 61 AANVTKL 67 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 44/64 (68%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KGTVKWF+ KGFGFI P GG+D+F H S+I+ +G+R+L A +SV+FDV G Sbjct: 15 RKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRPK 74 Query: 62 SVIV 65 ++ V Sbjct: 75 AIEV 78 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFN KGFGFI + GG D+F HYS IQ G++TL GQ V F+V G KG Sbjct: 25 MPEGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPA 83 Query: 61 ASVIVPV 67 A + P+ Sbjct: 84 AVNVKPI 90 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 43/62 (69%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G V+WF++ KGFGFI P GGED+F H S+I+ DG+R+L G++V+F + G G +V Sbjct: 8 GVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKAV 67 Query: 64 IV 65 V Sbjct: 68 DV 69 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN++KGFGFI E G ED+F H+S I G+++L G V FD+ QG KG Sbjct: 1 MANGTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPA 59 Query: 61 ASVIVPV 67 A+ + V Sbjct: 60 ATNVTVV 66 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTVKWFN +KGFGFI + G D+F H+S I+M+GY+ L+ G V+FDV +G KG Sbjct: 67 MSEGTVKWFNASKGFGFIA-QDNGNDVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPA 125 Query: 61 ASVI 64 A + Sbjct: 126 ADNV 129 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFN KG+GFI E G D+F HYS I+ DG++TL+ GQ V+F+V + KG Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 61 ASVIVPV 67 AS + V Sbjct: 60 ASKVRKV 66 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+AKGFGFI PE G D+F H+ +IQ G+++L+ GQ V F V G KG A Sbjct: 5 QNGTVKWFNDAKGFGFITPE-SGNDLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQA 63 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 39/63 (61%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KG+GFI P G +D+F H S +Q G R+L GQ + F++ Q G Sbjct: 32 MLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRA 91 Query: 61 ASV 63 A+V Sbjct: 92 AAV 94 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KGFGFI PE G D+F H+ IQ +G+++LK GQ V F QG KG A Sbjct: 5 QSGTVKWFNDEKGFGFITPE-SGPDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQA 63 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 38/62 (61%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI P+ GG D+F H S +Q G TL GQ V +++ Q + Sbjct: 42 MATGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRRSGR 101 Query: 61 AS 62 +S Sbjct: 102 SS 103 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 4/69 (5%) Query: 1 MEKGTVKWFNNAKGFGFI-CPEGGGEDIFAHYSTIQMDGYR-TLKAGQSVQFDVHQGPKG 58 M+ GTVKWFN+ KGFGFI P G D+F H++ IQ + R L+ GQ VQFDV +GPKG Sbjct: 1 MKTGTVKWFNSEKGFGFIEVP--GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKG 58 Query: 59 NHASVIVPV 67 A+ +V + Sbjct: 59 LQAANVVKL 67 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 43/63 (68%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWF+ KGFGF+ P+ G ++F H+S I +G+R+L G+ V+F+V Q P G + Sbjct: 43 KGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKWKA 102 Query: 63 VIV 65 + V Sbjct: 103 LNV 105 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 2/62 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQGPKGN 59 M KG VKWFN KGFGFI E G D+F HY+ I+ +G YR L+ Q V+F++ +GPKG Sbjct: 1 MTKGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGL 59 Query: 60 HA 61 A Sbjct: 60 QA 61 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 39/62 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+ G D+F H S ++ G R+L GQ V +D+ + K Sbjct: 1 MNSGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGK 60 Query: 61 AS 62 +S Sbjct: 61 SS 62 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 67.0 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 31/59 (52%), Positives = 37/59 (62%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN KGFGFI PEGGG+DIF H S ++ G L GQ+V FD+ Q + S Sbjct: 184 GVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRRSGKTS 242 Score = 63.2 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M GTVKWFN AKGFGFI P+ GG+D+F H S + G L G V++++ Q + G Sbjct: 56 MASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGK 115 Query: 60 HASVIVPVEVEAAVA 74 A+ + V + A A Sbjct: 116 LAATSIVVTAQGAPA 130 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KG+GFI PE G D+F H+ I+ +G+++LK GQ V F QG KG A Sbjct: 5 QNGTVKWFNDEKGYGFITPESGA-DLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQA 63 Query: 62 SVI 64 + Sbjct: 64 DQV 66 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/61 (52%), Positives = 37/61 (60%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKW+N KGFGFI EGGG+D+F H + + G L GQ V V QGPKG A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 64 I 64 I Sbjct: 233 I 233 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 37/72 (51%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 + TVKWFN KGFGF+ G D+F H ++ G ++ G + V QG KG + Sbjct: 67 EATVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVT 126 Query: 63 VIVPVEVEAAVA 74 ++ V+ A A Sbjct: 127 EVLEVDTSTAEA 138 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KG+GFI EGG +D+F H+S IQ +G++TL GQ V+F++ +G +G A+ Sbjct: 3 GKVKWFSPEKGYGFIAREGG-DDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQAAN 61 Query: 64 IV 65 ++ Sbjct: 62 VI 63 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN+AKGFGFI PE G D+F H+ IQ G+++L+ GQ V F QG KG A Sbjct: 7 GIVKWFNDAKGFGFITPE-SGPDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQADQ 65 Query: 64 IVPV 67 + V Sbjct: 66 VQAV 69 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 44/65 (67%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWF+ KG+GFI + G D+F H+S I+ +G+++L G V+F++ GPKG Sbjct: 23 MYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQ 82 Query: 61 ASVIV 65 A+ +V Sbjct: 83 AAKVV 87 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FN KGFGFI + G D+F H+S IQ DG++TL GQ+V +DV + +G Sbjct: 25 MLNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQ 83 Query: 61 ASVIVPV 67 A +V + Sbjct: 84 AINVVAI 90 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKWFN+ KGFGF+ + D+F HY I G RTLK GQ V F + +G KG A+ Sbjct: 8 GTVKWFNDEKGFGFLSRDND-SDVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAAN 66 Query: 64 IVPV 67 + P+ Sbjct: 67 VTPL 70 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF+ AKG+GFI E GG D+F H+S I+ +G++TL+ GQ V+F++ +G +G A+ Sbjct: 2 QGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQAA 60 Query: 63 VIVPV 67 +V + Sbjct: 61 DVVKL 65 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWFN KG+GFI + GG+D+F H+S I G +TL GQ V +V QG KG A Sbjct: 6 EGTVKWFNEEKGYGFI-EQKGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGLQAE 64 Query: 63 VIVPV 67 + P+ Sbjct: 65 DVTPL 69 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/58 (56%), Positives = 38/58 (65%), Gaps = 1/58 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKWFN+ KGFGFI EGG D+F H+ I G RTL+ GQ V F+V QG KG A Sbjct: 35 GIVKWFNDEKGFGFIEREGG-PDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQA 91 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 26/52 (50%), Positives = 36/52 (69%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV 52 M+ GTVKWFN KG+GFI P+ GG+D+F H S ++ G R L GQ + ++V Sbjct: 1 MDTGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEV 52 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 39/64 (60%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 + GTV+WFN +GFGF+ P G +DIF H S I DG+R L+ GQ V F V + G+ Sbjct: 53 LRTGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQ 112 Query: 61 ASVI 64 A + Sbjct: 113 ARDV 116 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 40/62 (64%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G KWF++ KGFGFI P+ G EDIF H I+++G+R+L + V++++ KG +V Sbjct: 13 GVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAV 72 Query: 64 IV 65 V Sbjct: 73 NV 74 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 39/62 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+ GG+D+F H S ++ G + L Q + +++ G G Sbjct: 16 MPTGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRS 75 Query: 61 AS 62 ++ Sbjct: 76 SA 77 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 5/66 (7%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVH-----QGP 56 + GTVK+FN KGFGFI P+ G +D+F H S ++ G R+L GQ V FDV +GP Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 57 KGNHAS 62 K + S Sbjct: 63 KAVNLS 68 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN KGFGFI E G +D F H+S I G++T+ G+ V+FD+ G KG A+ Sbjct: 3 GKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQATN 61 Query: 64 IVP 66 +V Sbjct: 62 VVS 64 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 37/62 (59%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI P+ G D+F H S ++ G R LK GQ + +++ + K Sbjct: 2 MATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRKSGK 61 Query: 61 AS 62 S Sbjct: 62 MS 63 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 40/61 (65%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G KWFN AKG+GF+ P GG+++F H S IQM G+R+L + V+F+ + +G A+ Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 64 I 64 + Sbjct: 101 V 101 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN+ KGFGFI G D+F H+S I DG+++L GQ V F+V +G +G A Sbjct: 5 GKVKWFNSEKGFGFI-EVADGNDVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAKN 63 Query: 64 IVPV 67 +V + Sbjct: 64 VVKL 67 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV---HQGPKGN 59 KG V WFN+ KGFGFI E G DI+ HYS + DG++TL G+ V F+V PK Sbjct: 4 KGVVSWFNDIKGFGFIVDEAG-RDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKAT 62 Query: 60 HASVI 64 +I Sbjct: 63 AVRII 67 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 46/72 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VK + +G+G+I P+ GGED+F H++ I M G++ LK G+ V + + QG K Sbjct: 1 MKTGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQ 60 Query: 61 ASVIVPVEVEAA 72 A+ + P+ +A+ Sbjct: 61 AAQVQPIMKKAS 72 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 26/51 (50%), Positives = 36/51 (70%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV 52 + GT KWFN KG+GFI P+ G +DIF H + I+ G+R+L G+ V+FDV Sbjct: 24 QSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDV 74 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+GTVKWFN KGFGFI + G++IF H+ I+ G R L+ GQ V+F+V + KG A Sbjct: 113 EEGTVKWFNVKKGFGFIVRD-SGDEIFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQA 171 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 40/70 (57%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KG+GFI PE GG+D+ H S ++ G L G +V + + PKG A Sbjct: 40 GVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQAIR 99 Query: 64 IVPVEVEAAV 73 +V V+ A+ Sbjct: 100 VVDVDDTTAI 109 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 35/65 (53%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E VKWFN A+G+GF+ G DIF H T++ G R L GQ + +GPKG Sbjct: 134 EVAIVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMV 193 Query: 62 SVIVP 66 + I P Sbjct: 194 AEIAP 198 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI EG ED+FAH+S IQ G++ L G V+F++ G +G Sbjct: 1 MAVGKVKWFNAEKGYGFIETEGS-EDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKG 59 Query: 61 ASVIVPVEVEAAVA 74 V +AA A Sbjct: 60 PQARNIVVTKAAPA 73 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 41/62 (66%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G+VKWF + KGFGF+ + GG+D+F H S ++ G +L++G+ V V + PKG A+ Sbjct: 134 EGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGREAT 193 Query: 63 VI 64 I Sbjct: 194 WI 195 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 32/65 (49%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 + TVKWFN KGFGF+ P G D F H S + G L G V + GPKG Sbjct: 44 RATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVI 103 Query: 63 VIVPV 67 +V V Sbjct: 104 RLVDV 108 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 27/52 (51%), Positives = 33/52 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV 52 M GTVKWFN KGFGFI P+ GG D F H S ++ G L+ GQ V +D+ Sbjct: 48 MTTGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDL 99 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 2/66 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTI--QMDGYRTLKAGQSVQFDVHQGPKG 58 M +GTV+WF+ +GFGF+ + G +D+F H S I DG ++L+ GQSV+F++ +G +G Sbjct: 1 MPQGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRG 60 Query: 59 NHASVI 64 A + Sbjct: 61 PQARRV 66 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTV W+ KG+GF+ P+GGG +IFAH S I G + GQ V F V +G KG A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGG--VIAEGQRVAFLVVEGEKGPQA 137 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G V ++ +GFGFI P+ GG D+F H S ++ + L G V+F V Q +G A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 63 VI 64 + Sbjct: 313 RV 314 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TV W++ KGFGF+ P+ G D F H ++ G L G V F V G +G A + Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSL-AGGATELVEGDRVSFSVVPGDRGPQAQDV 222 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTV+ F+ KG+GFI G+ +FAHY+ IQ + Y+TL+ G+ V+ + GPKG Sbjct: 1 METGTVESFDKEKGYGFI-ETASGDKVFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLI 59 Query: 61 ASVIVPVEVE 70 A + EVE Sbjct: 60 AVKVFREEVE 69 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 31/61 (50%), Positives = 35/61 (57%), Gaps = 5/61 (8%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVH-----QGP 56 E G VK+FNN KGFGFI P+ GG DIF H S +Q G L Q V FD +GP Sbjct: 3 ETGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGP 62 Query: 57 K 57 K Sbjct: 63 K 63 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/62 (46%), Positives = 37/62 (59%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKW++ AKGFGF+ GG+D+F H S + G +L GQ V V +G KG AS Sbjct: 217 GTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGREASS 276 Query: 64 IV 65 I Sbjct: 277 IT 278 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 33/70 (47%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H ++ G+ L G + QG KG + + Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 65 VPVEVEAAVA 74 V+ A A Sbjct: 141 NSVDTSTAEA 150 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWFN++KG GFI + D+F HY +I +G++TLK GQ+V F + + G AS Sbjct: 6 KGTVKWFNDSKGVGFIQRDNEA-DVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQAS 64 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 40/64 (62%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G V WFN +KG+GFI P+ G ++F H S+I +GYR+L G +V+F + QG G +V Sbjct: 13 GKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKTKAV 72 Query: 64 IVPV 67 V Sbjct: 73 NVTA 76 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVK F+ GFGFI P+ GED+F H S+++ D YR+L ++ V G G + + Sbjct: 7 KGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRNKA 66 Query: 63 VIV 65 V V Sbjct: 67 VDV 69 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD--GYRTLKAGQSVQFDVHQGPKGNHA 61 G+VKWFN KG+GFI E GG+D+F H+ + G +L GQ V F++ +G KG A Sbjct: 7 GSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGPQA 66 Query: 62 SVIVPV 67 + P+ Sbjct: 67 ENVTPL 72 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 24/51 (47%), Positives = 33/51 (64%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV 52 + GTVKWFN KGFGFI P+ GG D+F H + ++ G TL V++D+ Sbjct: 8 DTGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDM 58 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA------GQSVQFDV-H 53 +G VKWFN KGFG+I P+ G D+F H S ++M+G+R G SV+FDV H Sbjct: 10 RRRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVEH 69 Query: 54 QGPKGNHASVIV 65 + P + Sbjct: 70 ESPTDERLKAVC 81 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 37/59 (62%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKWFN KG+GF+ P+ GG+D+F H S ++ GY +L G V +++ G A+ Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAA 114 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 35/58 (60%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 VKWFN+ KGFGFI P+ GG DIF H S ++ G R L GQ V +++ Q + S Sbjct: 116 VKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRRSGKTSA 173 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN AKGFGFI PE GG+D+F H + ++ G L G V +++ + + Sbjct: 1 MANGVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRRSGK 60 Query: 61 ASV 63 S Sbjct: 61 TSA 63 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 ++G VKWFN KGFGFI + G E++F H+ +Q G R+L+ G V+FD +G A Sbjct: 11 QRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQA 69 Query: 62 SVI 64 + Sbjct: 70 DNV 72 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/65 (44%), Positives = 38/65 (58%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKW++ AKGFGF+ + GG+D+F H S + G +L GQ V V +G KG A Sbjct: 178 GTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGREAQS 237 Query: 64 IVPVE 68 I E Sbjct: 238 ITVAE 242 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 33/70 (47%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H ++ G+ L G + QG KG + I Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 65 VPVEVEAAVA 74 V+ A A Sbjct: 125 TSVDTSTAEA 134 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 34/50 (68%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV 52 +G VKWFN KGFGFI P G E+IF H + I G+R++ G+ V++DV Sbjct: 6 RGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDV 55 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD--GYRTLKAGQSVQFDVHQGPKGN 59 E+GT +WF+ KG+GFI G+DIF HYS+IQ + G +TL V+F V +G +G Sbjct: 6 EQGTCRWFSKDKGYGFIIS-ADGKDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRGA 64 Query: 60 HASVIVPV 67 A +V V Sbjct: 65 QAVDVVVV 72 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/70 (48%), Positives = 42/70 (60%), Gaps = 6/70 (8%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+GTVKWFN KGFGFI E G E IF H+ +I +G R+L+ G V++ V KG A Sbjct: 124 EEGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQA 182 Query: 62 SVIVPVEVEA 71 EVEA Sbjct: 183 E-----EVEA 187 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 23/41 (56%), Positives = 33/41 (80%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTL 42 KG+VKWF+ KGFGFI P+ GG+D+F H S+I+ +G+R+L Sbjct: 11 RKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 4/71 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGP 56 M +GTVK+F KGFGFI P+ GGED+F HY+ I+ DG ++ L G V++ Sbjct: 1 MAQGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSG 60 Query: 57 KGNHASVIVPV 67 KG A +V + Sbjct: 61 KGTQAKDVVKL 71 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 3 KGTVKWFNNAKGFGFICP-EGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KG +WFN KGFGF+ + +DIF H + I+ +G+R+L G+ V+F + QG KG A Sbjct: 14 KGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGPQA 73 Query: 62 SVIV 65 IV Sbjct: 74 IEIV 77 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN AKG+GF+ + DIF H T++ G L+ G++V +GPKG Sbjct: 133 LEQAKVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKG-- 190 Query: 61 ASVIVPVEVEAA 72 +V E+EA+ Sbjct: 191 ---LVVAEIEAS 199 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGE----DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 G VKWF+ KG+GFI P+ + D+ H ++++ G G + DV + PKG Sbjct: 29 GRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRPKGW 88 Query: 60 HASVIVPVEVEAA 72 + +V ++ A Sbjct: 89 QVAEVVDLDESTA 101 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 37/66 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN KGFGF+ G EDIF H T++ G L+AGQ V +G KG Sbjct: 105 LERAIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLM 164 Query: 61 ASVIVP 66 + I P Sbjct: 165 TAEIYP 170 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Query: 4 GTVKWFNNAKGFGFICPE-GGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G +KWF+++KG+GF+ P+ DI H S +Q DG++T G V V + +G Sbjct: 16 GIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGLKCI 75 Query: 63 VIVPVEVEAAV 73 + +++ +AV Sbjct: 76 QVKSIDLSSAV 86 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWFN +KGFGFI + GE+IF H+ +I +G R LK GQ V F KG A Sbjct: 81 EEGEVKWFNVSKGFGFITKD-DGEEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQA 139 Query: 62 SVIVPV 67 + P+ Sbjct: 140 ENVEPL 145 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQ-MDGYRTLKAGQSVQFDVHQGPKGN 59 MEKG +K+F+ ++GFGFI P G ED+F H + I M L+ GQ+++++ Q KG Sbjct: 1 MEKGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGL 60 Query: 60 HASVIVPVE 68 A P + Sbjct: 61 SALNAAPAD 69 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 57.0 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 35/55 (63%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 G+ KWFN +KG+GF+ + GED+F H S + M G+R+L G+ V + + + G Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNG 109 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 38/72 (52%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E VKWFN KGFGF+ G EDIF H ++ G L G+ ++ QGPKG A Sbjct: 132 EDVKVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIA 191 Query: 62 SVIVPVEVEAAV 73 + P++ A V Sbjct: 192 IEVRPLDAPAPV 203 Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 35/68 (51%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G +KWF+ KG+GF+ + G D+ H + ++ DG+ G V + +G KG Sbjct: 35 GRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQVFR 94 Query: 64 IVPVEVEA 71 ++ ++ A Sbjct: 95 VISLDAPA 102 >UniRef50_A0PKE1 DNA-binding protein n=2 Tax=Mycobacterium RepID=A0PKE1_MYCUA Length = 135 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 3/63 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTL-KAGQSVQFDVHQGPKGNHAS 62 G + F++ +G+GFI P+ GGED+F H + + D R L K G V FD+ GP+G A+ Sbjct: 5 GRIVRFDDVRGYGFIAPDSGGEDVFLHANDLDFD--RLLAKRGTRVSFDIEDGPRGKFAT 62 Query: 63 VIV 65 ++ Sbjct: 63 AVL 65 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 7/69 (10%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M++G VK+FNN KGFGFI + EDIF H S + ++ VQF+V QG KG + Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLN 56 Query: 61 ASVIVPVEV 69 A V VEV Sbjct: 57 A---VNVEV 62 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTI--QMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTVKWF+ KG+GF+ + D+F H+S I G++TL GQ V+F+V Q KG A Sbjct: 5 GTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGPRA 64 Query: 62 SVI 64 + Sbjct: 65 KNV 67 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +++G KWF++ KGFGFI E G D+F H + I+ G+R L G+SV+F V G G Sbjct: 87 IQRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKR 145 Query: 61 ASVIV 65 +V V Sbjct: 146 KAVSV 150 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G KWF+ AK +GF+ P+ G D+F H I+M GYR+L + V++ KG A+ Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123 Query: 63 VIVPVE 68 + V+ Sbjct: 124 TVTGVD 129 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 1/48 (2%) Query: 4 GTVKWFNNAKGFGFICP-EGGGEDIFAHYSTIQMDGYRTLKAGQSVQF 50 GTV WF+ KGFGFI P EG +F +S+I+M GYRTL GQ V+F Sbjct: 17 GTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRF 64 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGE---DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 G KWFN+ +G+GFI P+ + D+F H S+I M+G+R+L+ G V+F KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 61 ASVIV 65 A +V Sbjct: 89 AVKVV 93 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 6/72 (8%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTL------KAGQSVQFDVHQG 55 + V WFN +G+G++ P G ED+F H S +QMDG+R++ +AG ++F++ Sbjct: 40 RREQVTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDD 99 Query: 56 PKGNHASVIVPV 67 + +V P Sbjct: 100 ERRRAKNVTGPA 111 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (61%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG V WFN AKGFGF+ + G D+F H S I +G+R+L+ + V+F++ G + + Sbjct: 45 KGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRYKA 104 Query: 63 VIV 65 V V Sbjct: 105 VKV 107 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 3/64 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWF+ A+G+GF+ P+ G +D+F H+S + + L+ G ++F++ + KG + Sbjct: 1 METGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDED---LEEGDRLEFEIEETEKGLN 57 Query: 61 ASVI 64 A I Sbjct: 58 AVNI 61 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E GTVKWF+ KG+GFI + G E F H S I M G+R L+ G+ V + V KG+ Sbjct: 12 VEHGTVKWFDPVKGYGFIAGDNGKE-TFVHQSDILMRGFRHLETGERVSYRVKATEKGDK 70 Query: 61 ASVIVP 66 A ++ Sbjct: 71 AIDVIS 76 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTV F+ KG+GFI P+ GGED+F H S + + L+ G V+F+ G +G Sbjct: 1 MKTGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTK 60 Query: 61 ASVI 64 A + Sbjct: 61 AMTV 64 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 40/71 (56%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G +KWF+ +KG+GF+ P+ G D+ H + ++ DGY+T G + + Q KG A Sbjct: 70 SGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQAF 129 Query: 63 VIVPVEVEAAV 73 IV ++ A+ Sbjct: 130 RIVSMDESTAI 140 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 35/66 (53%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN +GFGF+ G DIF H T++ G L+ GQ V G KG Sbjct: 160 LERAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMM 219 Query: 61 ASVIVP 66 A+ I P Sbjct: 220 AAEIQP 225 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E G VKWFN KGFGFI E GED+F H+ + L GQ V++ + QG KG A Sbjct: 78 EVGHVKWFNTDKGFGFIVRE-NGEDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQA 136 Query: 62 SVIVPVE 68 +V ++ Sbjct: 137 EQVVILD 143 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E TVKWF+ AKG+GF+ EDIF H ++ G L+ GQ ++ +G KG A Sbjct: 105 EDVTVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLA 164 Query: 62 SVIVP 66 + I P Sbjct: 165 AAIEP 169 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 37/67 (55%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF+ KG+GFI E GG D+ H S ++ G T G V + + KG A+ Sbjct: 15 RGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQAT 74 Query: 63 VIVPVEV 69 I+ +E+ Sbjct: 75 RIINLEI 81 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV 52 G KWFNN KG+GFI E GED+F H S I DG+R+L + V+ +V Sbjct: 6 GVCKWFNNKKGYGFITLE-NGEDVFVHQSEIYADGFRSLHENEKVELEV 53 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 35/63 (55%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VK F+ GF FI P+ G ED+F H S+++ DGYR+L ++ V G + Sbjct: 7 KGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRTKA 66 Query: 63 VIV 65 V V Sbjct: 67 VDV 69 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 VKWF+ AKGFGF G ED+F H ++ G+ L+ G++V V GP+G A+ Sbjct: 117 VKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAA 173 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 33/65 (50%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KGFGF+ + GG DI H + ++ G ++ G V +G A Sbjct: 24 GVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQAVE 83 Query: 64 IVPVE 68 I+ +E Sbjct: 84 IIAIE 88 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGNHA 61 K VKWF+ KG+GFI GGEDIF H+S I + ++ L V+F++ Q KG A Sbjct: 4 KSKVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQA 63 Query: 62 SVIVPVEVEAAV 73 + + + AV Sbjct: 64 KNVCEICQQGAV 75 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKW++ KGFGF+ + GGE +F H S + G TL+ GQ V+F + +G KG Sbjct: 1 MPTGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQ 58 Query: 61 ASVIVPVEVEAAVA 74 A + ++ +VA Sbjct: 59 ALQVRLLDTPPSVA 72 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKW++ KG+GFI + G D+F H S I L G V+FDV PKG Sbjct: 1 MTTGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPR 57 Query: 61 A 61 A Sbjct: 58 A 58 >UniRef50_Q0C0S6 Cold shock DNA-binding protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C0S6_HYPNA Length = 175 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 34/65 (52%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E T+KWFN +G+GF+ +G DIF H + GY ++ G + + G KG H Sbjct: 109 ETVTLKWFNRTRGYGFVLRDGQETDIFVHAVAFRKAGYEDIEPGTRIDVIIEVGAKGEHV 168 Query: 62 SVIVP 66 S + P Sbjct: 169 SFVKP 173 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGE-----DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 G +KWF++AKG+GFI E E D+ H S ++ G G + D + +G Sbjct: 23 GRIKWFDSAKGYGFIVAESSSEADMTGDVLLHISCLRDYGENYADEGAKIVCDAVRKERG 82 Query: 59 NHASVIVPVEVEAAV 73 + I+ +E AV Sbjct: 83 WQTAHIIEMERPRAV 97 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 38/62 (61%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VK+F+ KGFGF+ + GG+D+F H ++ G +TL++GQ V+ G KG A Sbjct: 136 EGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQAD 195 Query: 63 VI 64 + Sbjct: 196 TV 197 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN +KGFGF+ P G D F H S ++ G + G ++ D+ G +G V+ Sbjct: 52 TVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQ--VV 109 Query: 65 VPVEVEAAVA 74 + EV++ A Sbjct: 110 MVHEVDSTTA 119 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 G VKWFN +G+GFI + GED+F H + IQ + R++ + V+FDV GPKG Sbjct: 31 GKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSGPKGL 90 Query: 60 HASVIV 65 A+ + Sbjct: 91 EAANVT 96 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 34/64 (53%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H S +Q GY L G ++ D+ G KG S I Sbjct: 8 TVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKGMQVSEI 67 Query: 65 VPVE 68 VE Sbjct: 68 YEVE 71 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VK+F+ KGFGF+ P+GGG+D++ T+Q G L+ GQ V+ + G KG A Sbjct: 147 GVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGPMAGS 206 Query: 64 I 64 + Sbjct: 207 L 207 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG++KWFN KGFGFI + G E +F H+ ++ R +K GQ V + V + +G A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 63 VIVPV 67 + P+ Sbjct: 119 DVSPL 123 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 38/69 (55%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ +GFGFI +G D+ H+S ++ G RTL G + +V +G A Sbjct: 36 GAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQARR 95 Query: 64 IVPVEVEAA 72 I+ +++ A Sbjct: 96 ILAIDLSTA 104 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 34/64 (53%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E VKWFN KG+GF+ +G +DIF H T++ G L ++ + +G KG A Sbjct: 133 EPVIVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLA 192 Query: 62 SVIV 65 ++ Sbjct: 193 VELI 196 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 E+ VKWFN KG+GF+ +G DIF H T++ G L+ G V +GPKG Sbjct: 134 ERAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKG 190 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGE----DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 G VKWF+ KG+GFI P+ G+ D+ H ++++ G T G + DV + PKG Sbjct: 20 GRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRPKGW 79 Query: 60 HASVIVPVEVEAA 72 S +V ++ AA Sbjct: 80 QVSEVVDLDESAA 92 >UniRef50_B7G5B5 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G5B5_PHATR Length = 286 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 5/57 (8%) Query: 3 KGTVKWFNNAKGFGFICPEGG----GEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQ 54 +GTVKWF++ KG+GF+ P E+IF H ++IQ +G YRTL ++FDV + Sbjct: 5 QGTVKWFDSRKGYGFVAPTSDNSPTAEEIFVHQTSIQSEGAYRTLVENSEIEFDVEK 61 >UniRef50_Q5GRS9 Cold shock protein n=7 Tax=Wolbachia RepID=Q5GRS9_WOLTR Length = 84 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 27/40 (67%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYR 40 ME G +KWFN KG+GFI PE G DIF H ST++ G R Sbjct: 1 MEFGNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIR 40 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 33/50 (66%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQF 50 ++KG VKWF+ G+GFI PE GG DI+ H + I ++L AGQ V+F Sbjct: 3 LKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEF 52 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G + F+ +G+GFI P+ GGED+F H + + D R L G V+FDV +G +G AS Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFD-KRLLGPGMKVEFDVEEGDRGLKASR 67 Query: 64 I 64 + Sbjct: 68 V 68 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G V F++ KG+GFI P+ GGED+F H + + G TL +G V FDV G +G Sbjct: 1 MAQGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPGT-TLTSGTRVVFDVLDGGRGLK 59 Query: 61 A 61 A Sbjct: 60 A 60 >UniRef50_Q56922 Major cold shock protein (Fragment) n=404 Tax=Bacteria RepID=CSPA_YEREN Length = 46 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 30/45 (66%) Query: 13 KGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 KGFGFI P G +D+F H+S IQ + ++TL GQ V+F + G K Sbjct: 2 KGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENGAK 46 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT-LKAGQSVQFDVHQGPKGNH 60 ++G VKWFN KG+GFI P G +D+F H + + G+ L+ G+ V ++V + PKG Sbjct: 3 QRGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLS 62 Query: 61 A 61 A Sbjct: 63 A 63 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 39/65 (60%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ G VKWFN ++G+GFI P GG D++ + + I ++L GQ V+F ++ G Sbjct: 3 LKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHGPS 62 Query: 61 ASVIV 65 A+ ++ Sbjct: 63 AADVI 67 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 29/51 (56%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ 54 G VKWFN K FGFI E GG+D+F H S + G L GQ V FD+ Sbjct: 7 GKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLED 57 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 KG VKWFN G+GFI + DIF H S I + R+L+ G+ V+F V +G KG Sbjct: 27 KGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKG 86 Query: 59 NHASVIV 65 + AS + Sbjct: 87 DEASEVT 93 >UniRef50_Q52287 Major cold shock protein (Fragment) n=22 Tax=cellular organisms RepID=CSPA_PHOPO Length = 46 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/45 (51%), Positives = 30/45 (66%) Query: 13 KGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 KGFGFI + GG D+F H+ I +G++TL GQ V F+V QG K Sbjct: 2 KGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQK 46 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FNN KG+GFI E G D F H + +Q G TL Q V +++ G G Sbjct: 23 MAIGTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKV 82 Query: 61 ASV 63 +++ Sbjct: 83 SAI 85 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVH-----QGP 56 + GTVK+F KGFGFI P+ G D+F H S ++ G TL +GQ + F+ +GP Sbjct: 122 QSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKGP 181 Query: 57 K 57 K Sbjct: 182 K 182 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 9/74 (12%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 213 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 272 Query: 60 HASVI-----VPVE 68 A+ + VPVE Sbjct: 273 EAANVTGPDGVPVE 286 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 32/56 (57%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 +GTVKW++ KGFGFI P G +D F H + + G L GQ V + QG KG Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKG 190 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI G+DIF H + + + R+L G+ V+FDV +G KG Sbjct: 59 QGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQKG 118 Query: 59 NHASVIV 65 A+ + Sbjct: 119 PEAANVT 125 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVH-----QGP 56 + G VK+FN KGFGFI P+ GG DIF H S +Q G L Q V ++ +GP Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 57 KGNHASV 63 K + ++ Sbjct: 75 KAVNITI 81 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 9/74 (12%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 62 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 121 Query: 60 HASVI-----VPVE 68 A+ + VPVE Sbjct: 122 EAANVTGPDGVPVE 135 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 52.8 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI + ED+F H + I + R++ G+ V+FDV +G KGN Sbjct: 35 GTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGN 94 Query: 60 HASVIVPVE 68 A+ + E Sbjct: 95 EAANVTGPE 103 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 9/74 (12%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA----GQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R A G++V+FDV +G KG Sbjct: 90 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEGEKGA 149 Query: 60 HASVI-----VPVE 68 A+ + VPVE Sbjct: 150 EAANVTGPDGVPVE 163 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 9/74 (12%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 93 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 152 Query: 60 HASVI-----VPVE 68 A+ + VPVE Sbjct: 153 EAANVTGPDGVPVE 166 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 G VKWFN +G+GF+C EDIF H S I +++ G+ + FD+ +G KGN Sbjct: 31 GKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGN 90 Query: 60 HASVIVPVE 68 A+ + ++ Sbjct: 91 EAANVSAID 99 >UniRef50_C6XKA2 Cold-shock DNA-binding domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XKA2_HIRBI Length = 166 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +KWFN KG+GF+ G EDIF H T++ G + GQ V + +GPKG++ Sbjct: 104 IKWFNRTKGYGFVHRVGEVEDIFLHMVTLRKAGLEEAEPGQKVWVTIGKGPKGSYV 159 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Query: 4 GTVKWFNNAKGFGFICPEGG--GEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKWF++ KGFGFI P+ G G++ H S ++ G + G + DV + +G Sbjct: 20 GRVKWFDSVKGFGFIIPDDGLDGQEALLHISILREFGVEQVVEGMLISCDVVKRERGYQV 79 Query: 62 SVIVPVE 68 + + +E Sbjct: 80 TEVKSLE 86 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 MEKGT+ F++ +G+GFI P GGG+D+F H + D + AG V ++V Q +G Sbjct: 1 MEKGTIVRFDDVRGYGFIAPFGGGDDVFVHANDFG-DQRHAVAAGMRVSYEVVQSERGLK 59 Query: 61 ASVIV 65 + +V Sbjct: 60 VASVV 64 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 KG VKWFN G+GFI + DIF H S I + R+L+ G+ V+F V +G KG Sbjct: 27 KGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKG 86 Query: 59 NHASVIV 65 + AS + Sbjct: 87 DEASEVT 93 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDV 52 +G V F++ KGFGFI P+ GGED+F H+S I+ DG YR+L V+F V Sbjct: 15 RGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTV 65 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEG---GGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ 54 + +G++KW+N KG+GFI PEG G+D+F H S + G L GQ V +D Q Sbjct: 2 VHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQ 58 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 23/38 (60%), Positives = 27/38 (71%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG 38 M GTVKWFN+ KGFGFI + GG D+F H+S I DG Sbjct: 1 MATGTVKWFNSEKGFGFISQDDGGPDVFVHFSPIPGDG 38 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQF 50 M +G VKWF+ KGFGFI E GE++ HY+ I+ +G+R L+ G V++ Sbjct: 1 MGRGRVKWFSGEKGFGFIETE-SGEEVLVHYTEIKGEGFRALEEGAEVEY 49 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 52.0 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 20/49 (40%), Positives = 35/49 (71%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFD 51 +G + W++N KG+GFI P GGG D+F H S+++ +G+ L AG ++++ Sbjct: 111 RGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYE 159 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 13/74 (17%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQF------------ 50 +G V WFN+ KGFGFI + G D+F HY+ I DG+++L+ G+ V + Sbjct: 4 EGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPKAV 62 Query: 51 DVHQGPKGNHASVI 64 DVH +G +++ Sbjct: 63 DVHLADEGARRTLL 76 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G +KWFN KGFGFI + G E +F HY ++ R++K GQ V + V +G A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQA 132 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 51.6 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI EDIF H + I + R++ G++V+FDV G KG Sbjct: 19 GTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGEKGR 78 Query: 60 HAS 62 A+ Sbjct: 79 EAA 81 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGG-EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G +KWF+ AKG+GFI P+ G DI H ++++ DG++T G + +V G +G Sbjct: 28 GHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGLQCF 87 Query: 63 VIVPVEVEAAV 73 ++ ++ A+ Sbjct: 88 RVLSMDASTAI 98 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 33/63 (52%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTV WF+ KGFGFI P+ +F + I+ GYRTL AG V + + G A Sbjct: 54 GTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEAVA 113 Query: 64 IVP 66 + P Sbjct: 114 VRP 116 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 6/75 (8%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKW++ KGFGF+ + GGE +F H S + G +LK GQ V+F V +G +G A Sbjct: 8 GKVKWYDAGKGFGFLTRDDGGE-VFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQALS 65 Query: 64 IVPVE----VEAAVA 74 + ++ VE +VA Sbjct: 66 VRTLDPLPSVERSVA 80 >UniRef50_C7HUZ9 Conserved domain protein n=2 Tax=Anaerococcus RepID=C7HUZ9_9FIRM Length = 68 Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 3/59 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQGPKGNHA 61 G VK+F+N KGFGFI E G D F HYS I D Y+T++ G V+FDV +G+ A Sbjct: 5 GKVKFFDNKKGFGFIESESG--DYFFHYSEIISDKVYKTIENGARVEFDVKDFGRGDTA 61 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G V ++ +GFGF+ PE GG D+F H + I +D +LK G V FDV + +G A V Sbjct: 9 GKVVHYDTNRGFGFLAPESGGADVFLHINDIDID-ESSLKPGAKVSFDVEETDRGAKA-V 66 Query: 64 IVPVEVEA 71 V V EA Sbjct: 67 NVAVTEEA 74 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 96 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGA 155 Query: 60 HASVIV 65 A+ + Sbjct: 156 EATNVT 161 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 36/58 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 M GTVK F++A GFGFI + F Y+ I+ GY++L+ GQ V++ + QG KG Sbjct: 1 MRTGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKG 58 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 36/61 (59%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTV+ F+ KG+G+I P GG +I H+S I L AGQ+V FD+ Q +G Sbjct: 1 MAEGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPE 60 Query: 61 A 61 A Sbjct: 61 A 61 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 KGTVKWFN G+GFI EDIF H + I + R+L + V FD+ +G KG Sbjct: 22 KGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKG 81 Query: 59 NHASVIV 65 A+ + Sbjct: 82 LEAASVT 88 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G + F++++GFGFI PE GG D+F H + I +D L+ G+ +FDV +G +G A Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLD-EDELRQGRVFEFDVTEGDRGPKA 62 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/41 (53%), Positives = 26/41 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT 41 M GTVKWFN KGFGFI P+ GG D F H S ++ R+ Sbjct: 1 MTTGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRS 41 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA---GQSVQFDVHQGPKGNH 60 GTVKWFN G+GFI ED+F H S I + + +++ G+ V+FDV G KGN Sbjct: 65 GTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGEKGNE 124 Query: 61 ASVIV 65 A+ + Sbjct: 125 AANVT 129 >UniRef50_A6FNL2 Cold shock DNA-binding domain protein n=2 Tax=Rhodobacteraceae RepID=A6FNL2_9RHOB Length = 135 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E VKWF+ KGFGF G ED+F H ++ G L+ G+++ V +G +G Sbjct: 61 LEPARVKWFDKGKGFGFANTFGRDEDVFVHVEVLRRSGLADLQPGEALAMRVIEGKRGRM 120 Query: 61 ASVI 64 A+ + Sbjct: 121 ATEV 124 >UniRef50_C0N6M9 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6M9_9GAMM Length = 207 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KG +K +N KG+GFI PE GG+DIF H ++Q G R K G+++ + + + + Sbjct: 5 RKGKIKTWNEGKGYGFIIPESGGKDIFLHIKSVQSRG-RVPKLGETIAYTLSKDKQNRLC 63 Query: 62 SV 63 ++ Sbjct: 64 AI 65 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 30/47 (63%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQF 50 G VK+FN+ KGFGF+ + GGED+F H S ++ G L GQ + F Sbjct: 138 GVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSF 184 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 35/60 (58%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVK+FN KGFGFI + G D F H S ++ G +L G + F++ +G +A+V Sbjct: 237 GTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKYAAV 296 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVK+FN KGFGFI + G D F H S ++ G L G + F++ +G +A+V Sbjct: 87 GTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKYAAV 146 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 4/61 (6%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KG VK+FN++KGFGFI EG +D F H S + ++ G V+F++ +G KG + Sbjct: 1 MNKGIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLN 56 Query: 61 A 61 A Sbjct: 57 A 57 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ AKGFGF+ + GG DI H + ++ G ++ G ++ H+ +G A+ Sbjct: 13 GLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQATQ 72 Query: 64 I 64 + Sbjct: 73 V 73 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 35/62 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E VKWF+ +KGFGF G +DIF H ++ G L+ G+++ V G +G+ Sbjct: 103 IEPARVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHM 162 Query: 61 AS 62 A+ Sbjct: 163 AA 164 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 4 GTVKWFNNAKGFGFI-------CPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP 56 G KWFN GFGFI P D+F H S + M+G+R+L+ G++++F + Sbjct: 6 GVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKSS 65 Query: 57 KG 58 KG Sbjct: 66 KG 67 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI PE GGED+F H + + + ++AG V+F++ G +G Sbjct: 1 MAAGRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLIP-ESAVRAGLMVEFEIEDGDRGLK 59 Query: 61 ASVI 64 AS + Sbjct: 60 ASEV 63 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ GTVK+FN KGFGFI + G+DIF H S + + V+F + G KG + Sbjct: 136 LQTGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLN 191 Query: 61 A 61 A Sbjct: 192 A 192 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 G VKWFN G+GFIC ED+F H S I + R++ G+ VQFD+ G KG Sbjct: 38 GVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAGAKGT 97 Query: 60 HAS 62 A+ Sbjct: 98 EAA 100 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 4/64 (6%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 4 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKG 63 Query: 59 NHAS 62 + A+ Sbjct: 64 SEAA 67 >UniRef50_A3S070 Cold shock protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3S070_RALSO Length = 82 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 20/31 (64%), Positives = 23/31 (74%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHY 31 M GTVKWFN KGFGFI P+GGG D+F + Sbjct: 43 MATGTVKWFNETKGFGFITPDGGGADLFPPF 73 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 M KGTVK F++ +GFI + F Y +I+ +GY+ L GQ V++ + QG KG Sbjct: 1 MRKGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKG 58 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDV---HQGPK 57 M G V F+ +G+GFI P+GGG+D+F H +T+ D + L G V+++ +GPK Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 58 GNHASVIVP 66 V+ P Sbjct: 60 ALTVRVLGP 68 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 33/53 (62%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 V+WF+ G+G I + GE++F ++ I +GYRT+ +V F++ QGP G Sbjct: 2 VRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSG 54 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV +G KG Sbjct: 27 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEGEKGA 86 Query: 60 HASVIV 65 A+ + Sbjct: 87 EAANVT 92 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 22 EGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKG 81 Query: 59 NHASVIV 65 + A+ + Sbjct: 82 SEAANVT 88 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWF+ KG+GF+ GGED+F H+S ++ D +L G V+++V + +G +A Sbjct: 134 EQGRVKWFDPEKGYGFLV-RPGGEDLFVHHSEVEGDAS-SLGQGVEVEYEVGRNERGPNA 191 Query: 62 SVI 64 + Sbjct: 192 RRV 194 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 31 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKG 90 Query: 59 NHASVIV 65 + A+ + Sbjct: 91 SEAANVT 97 >UniRef50_A8L691 Cold-shock DNA-binding domain protein n=2 Tax=Frankia RepID=A8L691_FRASN Length = 72 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 2/56 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEG--GGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ 54 M KGTVK++N +G+G I G D + +S I+MDGYR L+AG V+FD Q Sbjct: 1 MTKGTVKFYNAERGWGAISSPDLPPGFDAWVGFSMIEMDGYRFLEAGDRVEFDYEQ 56 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 G VKWFN G+GFI EDIF H S I + R++ G++V+FDV +G KG+ Sbjct: 30 GVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGEKGH 89 Query: 60 HASVIVPVEVEA 71 A+ + + EA Sbjct: 90 EAANVTGPDGEA 101 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 3/52 (5%) Query: 10 NNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 N KGFGF P+GG +F H+S I G++TL GQ ++++V QG KG A Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQA 73 >UniRef50_Q2MF47 Putative cold shock protein n=1 Tax=Streptomyces rimosus subsp. paromomycinus RepID=Q2MF47_STRRY Length = 76 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGN 59 M G VKWF++ +G G + GGG D+ A+ S IQ D RTL G+ V F++ + +G Sbjct: 1 MPHGVVKWFDHERGAGLVAQTGGGPDVLAYRSAIQGDEPARTLTTGERVSFNLVEDFEGI 60 Query: 60 HASVI 64 A I Sbjct: 61 RAENI 65 >UniRef50_C5RAK7 Cold shock protein CspA n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RAK7_WEIPA Length = 69 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Query: 1 MEK--GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 MEK G VK + + KGFGFI +G +D+F H+S IQ R L GQ V+ V QG +G Sbjct: 1 MEKISGYVKTWQSDKGFGFIELKGE-DDVFVHFSAIQTPRVRDLTVGQEVKLVVVQGIRG 59 Query: 59 NHASVI 64 A+ + Sbjct: 60 PQAAAV 65 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW++ KGFGF+ E GED++ S + G LK+GQ V+F V G +G A Sbjct: 17 GKVKWYDAEKGFGFLSQE-DGEDVYVRSSALPA-GVEALKSGQRVEFGVAAGRRGPQA 72 >UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=Labrenzia RepID=A0NS44_9RHOB Length = 66 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVH 53 M G VKWF+N +G G I P+ GEDI S ++ G TL GQ V FD+ Sbjct: 1 MLHGNVKWFDNRRGIGTIEPQ-DGEDILVDISALRRSGIDTLTEGQLVAFDLE 52 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G +KWF+ KG+GFI + GG D+F H S + TL+ G +++ + G +GN Sbjct: 1 MPTGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVL--GRQGNK 58 Query: 61 AS 62 S Sbjct: 59 VS 60 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ 54 M GT+ WF+ G+GFI P+ GG DI + G R+L+ GQ V + + + Sbjct: 1 MLTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTR 54 >UniRef50_C8WB38 Cold-shock DNA-binding domain protein n=3 Tax=Zymomonas mobilis RepID=C8WB38_ZYMMN Length = 189 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 33/64 (51%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 E TVKWFN KG+GF+ +DIF H G + +AG+S+ + Q KG Sbjct: 119 FEAVTVKWFNRTKGYGFLIRNADQQDIFVHAEAFHAAGIKKFEAGKSLYACLRQSDKGLS 178 Query: 61 ASVI 64 A ++ Sbjct: 179 AYLL 182 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 35/70 (50%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KGFGF+ G DI H+S +Q G R L G V+ + +G A Sbjct: 30 GYVKWFDIIKGFGFLIGSKGEGDILIHFSLLQEYGKRFLPEGSWVKCLARRSRQGWKAHK 89 Query: 64 IVPVEVEAAV 73 I+ E+ + Sbjct: 90 ILAFELNKDI 99 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FNN+KGFGFI + G++ F H S + ++ V F++ +G KG + Sbjct: 1 MNNGTVKFFNNSKGFGFIIEKESGKEYFVHVSGL----VDEIRENDEVTFELEKGKKGLN 56 Query: 61 A 61 A Sbjct: 57 A 57 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD----GYRTLKAGQSVQFDVHQGPKGN 59 G VKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KGN Sbjct: 90 GVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIGEKGN 149 Query: 60 HASVIV 65 A+ + Sbjct: 150 EAANVT 155 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VK+FN +KG+GFI + DIF H + ++G T++ VQF+V G KG + Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITG--LNGI-TIREKDRVQFEVVDGKKGLN 57 Query: 61 ASVIVPVE 68 A + ++ Sbjct: 58 AVKVKKID 65 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW+++ KGFGF+ E GED++ S + G LKAGQ V+F + G +G A Sbjct: 54 GKVKWYDSDKGFGFLSQE-EGEDVYVRSSALPA-GVEGLKAGQRVEFGIASGRRGPQA 109 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTI---QMDGYRTLKAGQSVQFDVHQGPKGNH 60 G VKW+N KG+GFI + ED+F H S I Q ++L + V FDV +G KGN Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 61 A 61 A Sbjct: 65 A 65 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTI----QMDGYRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H S I R++ G+ V+FDV G KG+ Sbjct: 26 GTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGEKGH 85 Query: 60 HASVIV 65 A+ + Sbjct: 86 EAANVT 91 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 9/63 (14%) Query: 4 GTVKWFNNAKGFGF--------ICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGF IC + D+F H S + M+G+R+LK G++V+F + Sbjct: 36 GVCKWFNVRMGFGFLSMTHREGICLDSP-VDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 56 PKG 58 KG Sbjct: 95 SKG 97 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 47.0 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDV 52 G V F++ KGFGFI P+ G +D+F H+S I+ D GYRTL V+F + Sbjct: 16 GRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTI 65 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ +KGFGF+ GG DI H + ++ G ++ G V + + P+G A Sbjct: 13 GVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQAVE 72 Query: 64 IVPV 67 ++ + Sbjct: 73 VLEI 76 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 34/66 (51%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIV 65 VKWF+ AKGFGF D+F H ++ G+ L G+++ V G +G A+ I+ Sbjct: 108 VKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQIL 167 Query: 66 PVEVEA 71 E A Sbjct: 168 SWERAA 173 >UniRef50_C8XGY3 Cold-shock DNA-binding domain protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGY3_NAKMY Length = 101 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEG--GGEDIFAHYSTIQMDGYRTLKAGQSVQFD 51 M +G VK+F KG+G I + G D + H+S I+ DGYR L AG V FD Sbjct: 1 MARGFVKFFKPDKGWGAITSDALPEGSDAWVHFSVIESDGYRALDAGDVVDFD 53 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA---GQSVQFDVHQGPKGN 59 KG VKWFN KG+GFI + E F H+ +I + R LK + V FD+ + KG Sbjct: 6 KGKVKWFNKNKGYGFIITDDNKE-YFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKGI 64 Query: 60 HASVIVPV 67 A I+ V Sbjct: 65 QAINIIRV 72 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTI----QMDGYRTLKAGQSVQFDV 52 GTVKWFN GFGFI GED+F H S+I R++ G+ V+F V Sbjct: 54 GTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGV 106 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 35/60 (58%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ +G+GF+ + D+F H +T++ G+ ++ G ++ +GPKG A+ I Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 30/63 (47%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKW++ A+G+GFI G DI H S ++ G + QG KG A Sbjct: 17 EGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQAV 76 Query: 63 VIV 65 +V Sbjct: 77 ELV 79 >UniRef50_UPI0001AEE83B putative DNA binding protein n=2 Tax=Streptomyces RepID=UPI0001AEE83B Length = 159 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ G + F+ +G+GFI P GGED+F H + + + Y ++G+ V+F G KG Sbjct: 2 LKTGKILRFDEVRGYGFIVPNEGGEDVFMHANDLVDEKY-LYQSGREVEFFEEMGEKGPK 60 Query: 61 ASVI 64 AS I Sbjct: 61 ASQI 64 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M+ G+VK+FN KG+GFI P+ G DIF H + D R V+++V +GP G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGR 58 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG---YR-TLKAGQSVQFDVHQGPKGN 59 GTV WF KG+GFI + ED+F H++ I YR ++ G+ V+FDV QG G Sbjct: 70 GTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGEWGT 129 Query: 60 HAS 62 A+ Sbjct: 130 EAA 132 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%) Query: 4 GTVKWFNNAKGFGFICPEGGGE-------DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP 56 G KWFN GFGF+ D+F H S + M+G+R+LK G++V+F + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 57 KG 58 KG Sbjct: 102 KG 103 >UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=Bacteria RepID=A4VQF2_PSEU5 Length = 235 Score = 46.6 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 6/72 (8%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQF----DVHQGPKG 58 +GT+K +N+ KGFGFI PE GGE++F H S + G R G V F D + Sbjct: 4 RGTLKSWNDDKGFGFIRPEQGGEELFVHISAVH--GERRPLVGGRVLFVAGRDAQGRLRA 61 Query: 59 NHASVIVPVEVE 70 H + P+ ++ Sbjct: 62 EHVRLDAPLTLD 73 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY-RTLKAGQSVQFDVHQGPKG 58 GTVKW+++ +G+GF+ G D+F H+S I+ G+ + + G+S+ FD+ + KG Sbjct: 6 GTVKWYDSERGYGFVST-NDGRDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKG 60 >UniRef50_A1TSW1 Cold-shock DNA-binding domain protein n=4 Tax=Acidovorax RepID=A1TSW1_ACIAC Length = 224 Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 G + +N+A+GFGFI P GG+ +F H Q R +AGQ V+F V GP G Sbjct: 5 GVIASWNDARGFGFIEPLQGGDPVFVHIKAFQGGAPRP-QAGQRVRFAVEAGPGG 58 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 31/61 (50%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VK F+ KG+GFI P G IF H + G TLK GQ + F++ Q G Sbjct: 1 MFNGIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGRS 60 Query: 61 A 61 + Sbjct: 61 S 61 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 129 3e-29 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 122 4e-27 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 117 9e-26 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 116 2e-25 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 115 4e-25 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 115 6e-25 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 113 2e-24 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 113 2e-24 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 112 3e-24 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 111 7e-24 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 110 2e-23 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 109 3e-23 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 109 3e-23 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 109 4e-23 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 109 4e-23 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 108 5e-23 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 107 8e-23 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 107 9e-23 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 107 1e-22 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 107 1e-22 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 107 1e-22 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 107 2e-22 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 106 2e-22 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 106 3e-22 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 105 3e-22 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 105 5e-22 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 105 6e-22 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 104 1e-21 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 103 2e-21 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 103 2e-21 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 102 3e-21 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 102 4e-21 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 102 5e-21 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 102 5e-21 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 101 6e-21 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 101 6e-21 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 101 7e-21 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 101 8e-21 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 101 8e-21 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 101 8e-21 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 101 9e-21 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 100 1e-20 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 100 1e-20 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 100 1e-20 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 100 1e-20 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 100 1e-20 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 100 2e-20 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 100 2e-20 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 100 2e-20 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 100 2e-20 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 100 3e-20 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 99 3e-20 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 99 3e-20 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 99 3e-20 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 99 4e-20 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 99 4e-20 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 99 4e-20 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 99 5e-20 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 99 5e-20 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 98 6e-20 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 98 7e-20 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 98 9e-20 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 98 9e-20 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 98 9e-20 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 98 1e-19 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 97 1e-19 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 97 2e-19 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 97 2e-19 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 97 2e-19 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 97 2e-19 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 97 2e-19 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 97 2e-19 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 97 2e-19 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 97 2e-19 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 96 2e-19 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 96 2e-19 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 96 3e-19 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 96 3e-19 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 96 4e-19 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 96 4e-19 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 96 4e-19 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 96 5e-19 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 96 5e-19 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 96 5e-19 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 96 5e-19 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 95 5e-19 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 95 5e-19 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 95 6e-19 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 95 6e-19 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 95 7e-19 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 95 7e-19 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 95 7e-19 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 95 8e-19 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 94 9e-19 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 94 1e-18 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 94 1e-18 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 94 1e-18 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 94 1e-18 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 94 2e-18 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 94 2e-18 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 94 2e-18 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 94 2e-18 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 94 2e-18 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 93 2e-18 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 93 2e-18 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 93 2e-18 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 93 3e-18 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 93 3e-18 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 93 3e-18 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 92 4e-18 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 92 4e-18 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 92 4e-18 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 92 4e-18 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 92 4e-18 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 92 5e-18 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 92 5e-18 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 92 5e-18 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 92 5e-18 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 92 5e-18 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 92 7e-18 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 91 8e-18 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 91 9e-18 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 91 1e-17 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 91 1e-17 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 91 1e-17 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 91 1e-17 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 91 2e-17 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 90 2e-17 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 90 2e-17 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 90 2e-17 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 90 2e-17 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 90 2e-17 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 90 2e-17 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 90 2e-17 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 89 4e-17 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 89 4e-17 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 89 4e-17 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 89 4e-17 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 89 4e-17 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 89 5e-17 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 89 6e-17 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 88 6e-17 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 88 6e-17 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 88 8e-17 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 88 9e-17 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 88 1e-16 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 88 1e-16 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 87 1e-16 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 87 1e-16 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 87 2e-16 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 87 2e-16 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 87 2e-16 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 87 2e-16 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 87 2e-16 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 86 3e-16 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 86 3e-16 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 86 3e-16 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 86 4e-16 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 86 4e-16 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 86 4e-16 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 86 5e-16 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 85 6e-16 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 85 7e-16 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 85 7e-16 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 85 8e-16 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 84 9e-16 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 84 1e-15 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 84 1e-15 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 84 2e-15 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 84 2e-15 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 84 2e-15 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 84 2e-15 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 83 2e-15 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 83 3e-15 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 83 3e-15 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 83 3e-15 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 83 3e-15 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 82 4e-15 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 82 4e-15 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 82 5e-15 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 82 5e-15 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 82 5e-15 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 82 6e-15 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 82 7e-15 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 81 9e-15 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 81 9e-15 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 81 1e-14 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 81 1e-14 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 81 1e-14 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 81 2e-14 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 81 2e-14 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 81 2e-14 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 80 2e-14 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 80 2e-14 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 80 3e-14 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 79 3e-14 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 79 4e-14 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 79 4e-14 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 79 4e-14 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 79 5e-14 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 79 5e-14 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 79 5e-14 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 79 6e-14 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 78 8e-14 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 78 9e-14 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 78 1e-13 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 77 1e-13 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 77 1e-13 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 77 2e-13 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 77 2e-13 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 77 2e-13 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 77 2e-13 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 76 3e-13 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 76 3e-13 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 76 4e-13 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 76 4e-13 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 76 4e-13 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 76 5e-13 UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rh... 76 5e-13 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 75 7e-13 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 75 8e-13 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 74 1e-12 UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex q... 74 1e-12 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 74 1e-12 UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Ma... 74 1e-12 UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rh... 74 2e-12 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 74 2e-12 UniRef50_Q5GRS9 Cold shock protein n=7 Tax=Wolbachia RepID=Q5GRS... 73 2e-12 UniRef50_Q2MF47 Putative cold shock protein n=1 Tax=Streptomyces... 73 2e-12 UniRef50_C8V3H1 Cold shock NA binding domain protein (JCVI) n=1 ... 73 3e-12 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 73 3e-12 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 73 4e-12 UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1... 72 4e-12 UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pe... 72 4e-12 UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=F... 72 4e-12 UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria Rep... 72 5e-12 UniRef50_C5S7F5 Cold-shock DNA-binding domain protein n=1 Tax=Al... 72 5e-12 UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radioba... 72 5e-12 UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodoco... 72 5e-12 UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=La... 72 6e-12 UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=B... 72 6e-12 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 72 6e-12 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 72 6e-12 UniRef50_A6FNL2 Cold shock DNA-binding domain protein n=2 Tax=Rh... 72 8e-12 Sequences not found previously or not previously below threshold: UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 81 9e-15 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 78 1e-13 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 76 5e-13 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 75 6e-13 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 73 3e-12 UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Ps... 72 7e-12 >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 67/74 (90%), Positives = 69/74 (93%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQ V+FDVHQGPKGNH Sbjct: 24 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNH 83 Query: 61 ASVIVPVEVEAAVA 74 ASVIVP+E E A A Sbjct: 84 ASVIVPLEAEVAPA 97 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 74/74 (100%), Positives = 74/74 (100%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH Sbjct: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 Query: 61 ASVIVPVEVEAAVA 74 ASVIVPVEVEAAVA Sbjct: 61 ASVIVPVEVEAAVA 74 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 117 bits (295), Expect = 9e-26, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 49/67 (73%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN++KGFGFI P+ GG+D+FAH+S I G+R+L Q V FD+ +GPKG Sbjct: 44 MATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQ 103 Query: 61 ASVIVPV 67 AS I P+ Sbjct: 104 ASNIQPI 110 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 62/67 (92%), Positives = 64/67 (95%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQ V FDVHQGPKGNH Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNH 60 Query: 61 ASVIVPV 67 AS+IVP+ Sbjct: 61 ASLIVPL 67 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 40/74 (54%), Positives = 54/74 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VKWFN+AKGFGFI P+ GG+D+FAH+S I+ DG+++L+ Q VQF+V GPKG Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 61 ASVIVPVEVEAAVA 74 A+ I P+ A A Sbjct: 78 AANITPLXALTAGA 91 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 44/66 (66%), Positives = 51/66 (77%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFNNAKG+GFI + GGED+FAHYS I MDGY+TLKAGQ V F++ +G KG H Sbjct: 42 MPTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLH 101 Query: 61 ASVIVP 66 A IV Sbjct: 102 AINIVA 107 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +KGTVKWFN+ KG+GFI PE G D+F H+ I+ +G+++LK GQ V F+ QG KG A Sbjct: 101 QKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQA 159 Query: 62 SVIVPV 67 + PV Sbjct: 160 DKVQPV 165 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 41/67 (61%), Positives = 50/67 (74%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI +GGGED+F H++ I MDG+RTL+ GQ VQFDV +GPKG Sbjct: 34 MATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQ 93 Query: 61 ASVIVPV 67 A + Sbjct: 94 AQNVRAA 100 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 47/74 (63%), Positives = 54/74 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI PEGGGED+FAH+S I MDG+RTLK G V F++ GPKG Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 61 ASVIVPVEVEAAVA 74 A I P+E A A Sbjct: 61 AQNIAPLESRADPA 74 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 42/64 (65%), Positives = 52/64 (81%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTVKWFN++KGFGFI P+ GGED+FAH+S I M+G++TLK GQ V F+V QGPKG Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 61 ASVI 64 AS I Sbjct: 61 ASNI 64 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 44/66 (66%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWF+ KG+GFI + G D+F H+S I+ +G+++L G V+F++ GPKG Sbjct: 23 MYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQ 82 Query: 61 ASVIVP 66 A+ +V Sbjct: 83 AAKVVK 88 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWFN +KGFGFI + G +D+F H+ I+ +G+R L GQ V+F + KG A Sbjct: 175 EAGTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQA 233 Query: 62 SVIVPVEV 69 +VPVE Sbjct: 234 EDVVPVEA 241 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 48/65 (73%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KGFGFI P+GGG+D+F H+ I+ DG+++LK GQ+V F +G KG A Sbjct: 26 QTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQA 85 Query: 62 SVIVP 66 + + P Sbjct: 86 AQVRP 90 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 44/64 (68%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI P+ G +D+FAHYS I +GY++L+ Q V F+V QGPKG Sbjct: 1 MATGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPS 60 Query: 61 ASVI 64 A I Sbjct: 61 AKNI 64 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 109 bits (272), Expect = 4e-23, Method: Composition-based stats. Identities = 36/71 (50%), Positives = 45/71 (63%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWF+ KGFGFI P+ GGED+F H S+++ DGYR+L G V+F V G G + Sbjct: 7 KGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRTKA 66 Query: 63 VIVPVEVEAAV 73 V V AV Sbjct: 67 VNVTAPGGRAV 77 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 44/63 (69%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKWFN+ KGFGFI P+ GG+D+F H S+I+ +G+R+L G++V+F V G + Sbjct: 5 TGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGRTKA 64 Query: 63 VIV 65 V V Sbjct: 65 VDV 67 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 107 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 43/64 (67%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G KWFN+ KGFGF+ P+ GG+D+F H I+ DG+R+L+ + V+F H+ KG A Sbjct: 71 RQGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEA 130 Query: 62 SVIV 65 +++ Sbjct: 131 TLVT 134 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 46/66 (69%), Positives = 54/66 (81%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNNAKG+GFI +GG ED+FAHYS IQM+GYRTLKAGQ+V F++ QGPKG H Sbjct: 7 MLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLH 66 Query: 61 ASVIVP 66 A+ I P Sbjct: 67 ATDIRP 72 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 41/67 (61%), Positives = 46/67 (68%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI +GGG D+FAH+S I DGYR L+ GQ V F+V QG KG Sbjct: 1 MTDGTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQ 60 Query: 61 ASVIVPV 67 A IVP Sbjct: 61 AVNIVPA 67 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI E G +D+F HYS+I +G++TL+ GQ+V +DV + +G Sbjct: 21 MSTGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQ 79 Query: 61 ASVIVPVEVEA 71 A+ + V+ A Sbjct: 80 ANNVTVVDTAA 90 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 42/67 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KG+GFI PE D+F H+S IQ +G++ L+ V+F+ GPKG Sbjct: 1 MAVGTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQ 60 Query: 61 ASVIVPV 67 A+ + + Sbjct: 61 AANVTKL 67 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 50/64 (78%), Positives = 53/64 (82%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNNAKGFGFI PE GGEDIFAHYSTIQM+GYR+LKAGQ V F+V QGPKG H Sbjct: 1 MAVGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLH 60 Query: 61 ASVI 64 A I Sbjct: 61 AENI 64 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 47/65 (72%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V+F++ G KG A+ Sbjct: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 Query: 63 VIVPV 67 ++ + Sbjct: 65 NVIAL 69 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 51/67 (76%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN++KGFGFI P+ GG+D+FAH+S +Q +G+++L+ GQ V++ G KG Sbjct: 60 METGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPA 119 Query: 61 ASVIVPV 67 A+ I P+ Sbjct: 120 ATKIEPI 126 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 47/67 (70%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI + GG D+F H++ IQ DG+RTL GQ V+F+ +GPKG Sbjct: 1 MATGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQ 60 Query: 61 ASVIVPV 67 A + V Sbjct: 61 AENVRVV 67 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 105 bits (263), Expect = 5e-22, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN KGFGFI P+ G +D+F H+S IQ + +RTL Q V+F QGPKG A Sbjct: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGPSAV 65 Query: 63 VIVPV 67 +V + Sbjct: 66 NVVAL 70 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 105 bits (262), Expect = 6e-22, Method: Composition-based stats. Identities = 44/71 (61%), Positives = 54/71 (76%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFNNAKG+GFI +G +D+FAH+S++QMDGY+TLKAGQ+V FD KG H Sbjct: 1 MPRGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVH 60 Query: 61 ASVIVPVEVEA 71 A IVP EV A Sbjct: 61 AINIVPDEVPA 71 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFN KGFGFI + GG D+F HYS IQ G++TL GQ V F+V G KG Sbjct: 25 MPEGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPA 83 Query: 61 ASVIVPV 67 A + P+ Sbjct: 84 AVNVKPI 90 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN KG+GFI E G D+F H+S IQ DGY+TL+ GQ+V F+V +G Sbjct: 1 MEHGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQ 59 Query: 61 ASVI 64 A + Sbjct: 60 AVNV 63 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTVKWFN +KGFGFI + G D+F H+S I+M+GY+ L+ G V+FDV +G KG Sbjct: 67 MSEGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPA 125 Query: 61 ASVI 64 A + Sbjct: 126 ADNV 129 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 29/57 (50%), Positives = 36/57 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 M GTVKWFN KGFGFI P+ GG D+F H S +Q G TL GQ V +++ Q + Sbjct: 42 MATGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 43/67 (64%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KGFGFI +GGG D+FAHYS I G+R L GQ V FD+ QG KG Sbjct: 1 MASGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPT 60 Query: 61 ASVIVPV 67 A IVP Sbjct: 61 AENIVPA 67 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 41/67 (61%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+GG +D+F H S ++ G L Q V FD+ G G Sbjct: 53 MATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGRE 112 Query: 61 ASVIVPV 67 A+V + + Sbjct: 113 AAVNLAL 119 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTVKWFN KG+GFI E G D+F H+S IQ DG++TL+ GQ V FD +G Sbjct: 1 MKNGTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQ 59 Query: 61 ASVIVP 66 A+ +VP Sbjct: 60 AANVVP 65 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 41/66 (62%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 Query: 63 VIVPVE 68 ++ + Sbjct: 66 NVIITD 71 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 40/61 (65%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G KWFN AKG+GF+ P GG+++F H S IQM G+R+L + V+F+ + +G A+ Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 64 I 64 + Sbjct: 101 V 101 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 36/72 (50%), Positives = 49/72 (68%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KGTVKWF++ KGFGFI P+ GGED+F H S I+ +G+R+L G++V+F+V G G Sbjct: 9 AKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRTK 68 Query: 62 SVIVPVEVEAAV 73 +V V AAV Sbjct: 69 AVDVTGPDGAAV 80 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 GTVKWF+ KGFGFI P+ GGED+F H ++I+ DG+RTL G++V+F V G G A Sbjct: 8 TGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRTKA 67 Query: 62 SVIVPV 67 + V Sbjct: 68 VEVTAV 73 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI +GGG D+F HYS I G+R+L+ Q V FDV G G Sbjct: 1 MATGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQ 59 Query: 61 ASVIVPV 67 A + P Sbjct: 60 AENVSPA 66 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+ KGFGFI P G +D+F H+S IQ + Y+TL GQ+V+F + QG KG A Sbjct: 6 TGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPSAV 65 Query: 63 VIVPV 67 +V + Sbjct: 66 NVVAL 70 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 101 bits (252), Expect = 9e-21, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME+GTVKWFN KGFGFI E G +D+F H+S IQ DG+++L GQ+V FDV +G +G Sbjct: 1 MEQGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQ 59 Query: 61 ASVIVPV 67 A+ + Sbjct: 60 AANVQKA 66 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN KGFGFI E G D+F H+S IQ DG+++L GQ+V FDV + +G Sbjct: 1 MEHGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQ 59 Query: 61 ASVIVPV 67 A + Sbjct: 60 AVNVTKA 66 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ+V+F++ G KG A Sbjct: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 Query: 63 VIVPV 67 + + Sbjct: 65 NVTAI 69 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEG-GGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M +G VKWFNNAKGFGFI EG ED+F H+S I+MDGY+TLKAGQ V+F+V GPKG Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 60 HASVIVPVEVE 70 A I E + Sbjct: 61 QAIKINSSEEK 71 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 39/63 (61%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KG+GFI P G +D+F H S +Q G R+L GQ + F++ Q G Sbjct: 32 MLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRA 91 Query: 61 ASV 63 A+V Sbjct: 92 AAV 94 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 1/69 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGNH 60 +G VKWF+ KG+GFI GG DIF HYS I + ++TL+ GQ V+F++H+GPKG H Sbjct: 4 RRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLH 63 Query: 61 ASVIVPVEV 69 A +VP++ Sbjct: 64 ARNVVPLDE 72 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN+ KGFGFI E GG D+F H+ I G RTL+ GQ V F+V QG KG A Sbjct: 35 GIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQAEN 93 Query: 64 IVPV 67 + V Sbjct: 94 VSIV 97 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKWFN+ KGFGF+ + D+F HY I G RTLK GQ V F + +G KG A+ Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 63 VIVPV 67 + P+ Sbjct: 66 NVTPL 70 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M++GTVKWFN KGFGFI E G D+F H+S I +GY++L+ GQSV+F+V +G +G Sbjct: 1 MKQGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQ 59 Query: 61 ASVIVPV 67 A+ +V + Sbjct: 60 AANVVKL 66 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQM-DGYRTLKAGQSVQFDVHQGPKGN 59 M TVKWF+ KG+GFI GED+F HYS IQ D ++TLK+ Q V+F+++ GPKG Sbjct: 1 MRTSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGL 60 Query: 60 HASVIVPVEVEAAVA 74 HA + P++ E A + Sbjct: 61 HALEVAPLDDEEAPS 75 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 99.8 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWFN+AKG+GFI G G D+F HY I+ DG+R+L GQ V+F V QG KG A Sbjct: 72 ETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQA 130 Query: 62 SVIVPV 67 + + Sbjct: 131 EDVAGL 136 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M GTVKWFN AKGFGFI P+ GG+D+F H S + G L G V++++ Q + G Sbjct: 56 MASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGK 115 Query: 60 HASVIVPVEVEAAVA 74 A+ + V + A A Sbjct: 116 LAATSIVVTAQGAPA 130 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 30/54 (55%), Positives = 36/54 (66%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 G VKWFN KGFGFI PEGGG+DIF H S ++ G L GQ+V FD+ Q + Sbjct: 184 GVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRR 237 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 43/67 (64%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTVKWFN KGFGFI P+ D+F HYS IQ G++TL VQF++ QG KG Sbjct: 1 MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQ 60 Query: 61 ASVIVPV 67 A+ + V Sbjct: 61 ATGVTLV 67 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 99.4 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VKWFN+ KGFGFI E GG+D+F H+S IQ DG++TL+ GQ V F++ +G +G Sbjct: 1 MQTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 61 ASVIVP 66 A+ + Sbjct: 60 AANVTK 65 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWFN KGFGFI E G +D+F H+S IQ DGY++L+ GQ V+FD+ G +G A+ Sbjct: 2 QGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQAA 60 Query: 63 VIVPV 67 +V + Sbjct: 61 NVVKL 65 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKW++ KG+GFI + G D+F H S I L G V+FDV PKG Sbjct: 1 MTTGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISGS---ELNEGDRVEFDVTSSPKGPR 57 Query: 61 ASVIVPVE 68 A + E Sbjct: 58 AEHVRVTE 65 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWFNN KG+GFI + G+D+F HYS + M+G+++L+ G V+FDV +G KG A+ Sbjct: 21 KGTVKWFNNQKGYGFIS-DESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQAT 79 Query: 63 VIVPV 67 + + Sbjct: 80 NVTKL 84 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E G VKWFN AKG+GFI GED+F H+S IQ GY+TL G++V+F+ QGPKG +A Sbjct: 22 ENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLNA 80 Query: 62 SVIV 65 + +V Sbjct: 81 ANVV 84 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN++KGFGFI E G ED+F H+S I G+++L G V FD+ QG KG Sbjct: 1 MANGTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPA 59 Query: 61 ASVIVPV 67 A+ + V Sbjct: 60 ATNVTVV 66 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 98.2 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF+ AKG+GFI E GG D+F H+S I+ +G++TL+ GQ V+F++ +G +G A+ Sbjct: 2 QGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQAA 60 Query: 63 VIVPV 67 +V + Sbjct: 61 DVVKL 65 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 98.2 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 53/67 (79%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME G VKWFNNAKGFGFI EG DIFAHYS I+MDGYR+LKAGQ VQF+V KG+H Sbjct: 1 MEIGIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSH 60 Query: 61 ASVIVPV 67 A+ I+P+ Sbjct: 61 ATKIIPI 67 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNN KG+GFI E G +D+F H+S I DGYR L G+ V++++ +GPKG Sbjct: 1 MPTGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLF 59 Query: 61 ASVIVPVEVEA 71 A+ + + + Sbjct: 60 AAQVKSRDPSS 70 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 48/66 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFNNAKG+GFI E ED+F HYS+I +DGY+TLKAGQSV F G +G H Sbjct: 1 MHHGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLH 60 Query: 61 ASVIVP 66 A I+P Sbjct: 61 AVDIMP 66 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 97.8 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFN KG+GFI E G D+F HYS I+ DG++TL+ GQ V+F+V + KG Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 61 ASVIVPV 67 AS + V Sbjct: 60 ASKVRKV 66 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 97.8 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 213 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 272 Query: 60 HASVIVPVE 68 A+ + + Sbjct: 273 EAANVTGPD 281 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 97.1 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 34/57 (59%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 M GTVKWFN KGFGFI P+ GG D F H S ++ G L+ GQ V +D+ + Sbjct: 48 MTTGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKR 104 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FN KGFGFI + G D+F H+S IQ DG++TL GQ+V +DV + +G Sbjct: 25 MLNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQ 83 Query: 61 ASVIVPV 67 A +V + Sbjct: 84 AINVVAI 90 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 97.1 bits (241), Expect = 2e-19, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KG 58 M G VKWFN KG+GFI E G ED+FAH+S IQ G++ L G V+F++ G KG Sbjct: 1 MAVGKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKG 59 Query: 59 NHASVIVPVEVEAAVA 74 A IV + A A Sbjct: 60 PQARNIVVTKAAPAPA 75 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF++ KG+GFI + GG D+F H+S I+M+G++TLK GQ V+F++ +G KG A+ Sbjct: 2 RGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQAA 60 Query: 63 VIVPVE 68 + VE Sbjct: 61 HVKVVE 66 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G+VKWFN AKGFGFI E G D+FAH+S I DG++TL GQ VQF V QG KG A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 63 VIVPV 67 IV + Sbjct: 64 NIVCI 68 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKW++ KGFGF+ + GGE +F H S + G TL+ GQ V+F + +G KG Sbjct: 1 MPTGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQ 58 Query: 61 ASVIVPVEVEAAVA 74 A + ++ +VA Sbjct: 59 ALQVRLLDTPPSVA 72 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VK+FN KG+GFI E GG+DIF HYS I DGY+TL+ GQ V F+V +GP+G Sbjct: 1 MSTGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQ 59 Query: 61 ASVIVPV 67 A+ + + Sbjct: 60 AANVRGI 66 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWFN KG+GFI E G +D+F H+S I M+GY+TL GQ V+FDV + +GN A Sbjct: 2 RGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQAV 60 Query: 63 VIVPV 67 + V Sbjct: 61 NVRKV 65 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 96.7 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWFN++KGFGFI + G EDIF H+ IQ DGYR+LK G+ V+F V +G KG A Sbjct: 5 EQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGLQA 63 Query: 62 SVIVPVEV 69 + VE Sbjct: 64 EEVRRVEE 71 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 96 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGA 155 Query: 60 HASVIV 65 A+ + Sbjct: 156 EATNVT 161 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 96.3 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI EDIF H + I + R++ G++V+FDV G KG Sbjct: 19 GTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGEKGR 78 Query: 60 HASVIVPVEVE 70 A+ + + E Sbjct: 79 EAANVTGPDGE 89 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 96.3 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI + ED+F H + I + R++ G+ V+FDV +G KGN Sbjct: 35 GTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGN 94 Query: 60 HASVIVPVEVE 70 A+ + E Sbjct: 95 EAANVTGPEGS 105 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 95.9 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 44/65 (67%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWF+ KG+GFI E D+F H++ IQM+G++TL+ GQ V+FDV + KG A Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAK 63 Query: 63 VIVPV 67 + + Sbjct: 64 NVRVL 68 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 42/70 (60%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G KWF++ KGFGFI P+ G EDIF H I+++G+R+L + V++++ KG +V Sbjct: 13 GVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKAV 72 Query: 64 IVPVEVEAAV 73 V A V Sbjct: 73 NVSGPNGAPV 82 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQGPKGN 59 M KG VKWFN KGFGFI E G D+F HY+ I+ +G YR L+ Q V+F++ +GPKG Sbjct: 1 MTKGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGL 59 Query: 60 HASVIVPV 67 A + + Sbjct: 60 QACNVKKL 67 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 95.5 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KG+GFI E GG+D+F H+S IQ +G++TL GQ V+F++ +G +G A+ Sbjct: 3 GKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQAAN 61 Query: 64 IVP 66 ++ Sbjct: 62 VIK 64 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 4 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKG 63 Query: 59 NHASVIV 65 + A+ + Sbjct: 64 SEAANVT 70 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 8/73 (10%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAH--------YSTIQMDGYRTLKAGQSVQFDVHQG 55 GT KWFN KG+GFI P+ GG+D+F H S + MDG+R+L AG+ V+F + + Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 56 PKGNHASVIVPVE 68 P+GN A+ +V E Sbjct: 71 PEGNEATAVVSAE 83 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI G+DIF H + + + R+L G+ V+FDV +G KG Sbjct: 59 QGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQKG 118 Query: 59 NHASVIV 65 A+ + Sbjct: 119 PEAANVT 125 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 95.5 bits (237), Expect = 5e-19, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGE---DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 G KWFN+ +G+GFI P+ + D+F H S+I M+G+R+L+ G V+F KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 61 ASVIV 65 A +V Sbjct: 89 AVKVV 93 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 36/57 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 M GTVKWFN KGFGFI P+ G D+F H S ++ G R LK GQ + +++ + K Sbjct: 2 MATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRK 58 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 95.2 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYR----TLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R ++ G++V+FDV +G KG Sbjct: 90 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEGEKGA 149 Query: 60 HASVIVPVE 68 A+ + + Sbjct: 150 EAANVTGPD 158 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 93 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 152 Query: 60 HASVIVPVE 68 A+ + + Sbjct: 153 EAANVTGPD 161 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 95.2 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 62 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 121 Query: 60 HASVIVPVE 68 A+ + + Sbjct: 122 EAANVTGPD 130 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 95.2 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+GTVKWFN KGFGFI + G E IF H+ I+ G R L+ GQ V+F+V + KG A Sbjct: 113 EEGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQA 171 Query: 62 SVI 64 + Sbjct: 172 DNV 174 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 95.2 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 39/64 (60%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKWFN KG+GF+ P+ GG+D+F H S ++ GY +L G V +++ G A+ Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 64 IVPV 67 + + Sbjct: 116 NLRL 119 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 94.8 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 G VKWFN +G+GFI + GED+F H + IQ + R++ + V+FDV GPKG Sbjct: 31 GKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSGPKGL 90 Query: 60 HASVIV 65 A+ + Sbjct: 91 EAANVT 96 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 94.8 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN+ KGFGFI G D+F H+S I DG+++L GQ V F+V +G +G A Sbjct: 4 TGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAK 62 Query: 63 VIVPV 67 +V + Sbjct: 63 NVVKL 67 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 94.4 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+GTVKWFN KGFGFI E G E IF H+ +I +G R+L+ G V++ V KG A Sbjct: 124 EEGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQA 182 Query: 62 SVIVPVE 68 + ++ Sbjct: 183 EEVEALD 189 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 94.4 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KG+GFI PE G D+F H+ I+ +G+++LK GQ V F QG KG A Sbjct: 5 QNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQA 63 Query: 62 SVIVPV 67 + V Sbjct: 64 DQVQVV 69 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 39/64 (60%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GT KWFN KG+GFI P+ G +DIF H + I+ G+R+L G+ V+FDV G Sbjct: 24 QSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRKK 83 Query: 62 SVIV 65 + V Sbjct: 84 ARNV 87 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 40/71 (56%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+ KG+GFI PE GG+D+ H S ++ G L G +V + + PKG A Sbjct: 39 TGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQAI 98 Query: 63 VIVPVEVEAAV 73 +V V+ A+ Sbjct: 99 RVVDVDDTTAI 109 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 34/62 (54%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWFN A+G+GF+ G DIF H T++ G R L GQ + +GPKG + I Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 65 VP 66 P Sbjct: 197 AP 198 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 94.0 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/71 (43%), Positives = 46/71 (64%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G V+WF++ KGFGFI P GGED+F H S+I+ DG+R+L G++V+F + G G + Sbjct: 7 TGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKA 66 Query: 63 VIVPVEVEAAV 73 V V ++V Sbjct: 67 VDVTGPDGSSV 77 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 94.0 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 44/68 (64%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+N +GFGFI P+ G ++FAH+ I M+GY+TLK Q V +DV G G HA Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 63 VIVPVEVE 70 I+P E Sbjct: 64 NIIPGEAP 71 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 38/66 (57%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G KWF+ AK +GF+ P+ G D+F H I+M GYR+L + V++ KG A+ Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123 Query: 63 VIVPVE 68 + V+ Sbjct: 124 TVTGVD 129 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 39/65 (60%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 + GTV+WFN +GFGF+ P G +DIF H S I DG+R L+ GQ V F V + G+ Sbjct: 53 LRTGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQ 112 Query: 61 ASVIV 65 A + Sbjct: 113 ARDVR 117 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV +G KG Sbjct: 27 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEGEKGA 86 Query: 60 HASVIV 65 A+ + Sbjct: 87 EAANVT 92 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 93.6 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 KGTVKWF+ KGFGF+ P+ G ++F H+S I +G+R+L G+ V+F+V Q P G A Sbjct: 43 KGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKWKA 102 Query: 62 SVIVPVEVE 70 + + Sbjct: 103 LNVTGPDGS 111 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 39/62 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+ GG+D+F H S ++ G + L Q + +++ G G Sbjct: 16 MPTGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRS 75 Query: 61 AS 62 ++ Sbjct: 76 SA 77 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 G V WFN +KG+GFI P+ G ++F H S+I +GYR+L G +V+F + QG G A Sbjct: 12 TGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKTKA 71 Query: 62 SVIVP 66 + Sbjct: 72 VNVTA 76 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 46/73 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VK + +G+G+I P+ GGED+F H++ I M G++ LK G+ V + + QG K Sbjct: 1 MKTGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQ 60 Query: 61 ASVIVPVEVEAAV 73 A+ + P+ +A+ Sbjct: 61 AAQVQPIMKKASE 73 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+AKGFGFI PE G D+F H+ +IQ G+++L+ GQ V F V G KG A Sbjct: 5 QNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQA 63 Query: 62 SVIVPV 67 + V Sbjct: 64 DEVQVV 69 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQM-DGYRTLKAGQSVQFDVHQGPKGN 59 M+ GTVKWFN+ KGFGFI G D+F H++ IQ + + L+ GQ VQFDV +GPKG Sbjct: 1 MKTGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGL 59 Query: 60 HASVIVPV 67 A+ +V + Sbjct: 60 QAANVVKL 67 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 92.8 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 G VKWFN G+GFI EDIF H S I + R++ G++V+FDV +G KG Sbjct: 29 TGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGEKG 88 Query: 59 NHASVIVPVEVEA 71 + A+ + + EA Sbjct: 89 HEAANVTGPDGEA 101 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG---YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KGN Sbjct: 64 TGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGEKGN 123 Query: 60 HASVIV 65 A+ + Sbjct: 124 EAANVT 129 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KGFGFI PE G D+F H+ IQ +G+++LK GQ V F QG KG A Sbjct: 5 QSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQA 63 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 46/72 (63%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KGTVKWF+ KGFGFI P GG+D+F H S+I+ +G+R+L A +SV+FDV G Sbjct: 15 RKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRPK 74 Query: 62 SVIVPVEVEAAV 73 ++ V A V Sbjct: 75 AIEVSGPDGAPV 86 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 31 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKG 90 Query: 59 NHASVIV 65 + A+ + Sbjct: 91 SEAANVT 97 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 92.5 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 28/57 (49%), Positives = 37/57 (64%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 M GTVKWFN+ KGFGFI P+ G D+F H S ++ G R+L GQ V +D+ + K Sbjct: 1 MNSGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTK 57 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWFN KG+GFI GG+D+F H+S I G +TL GQ V +V QG KG A Sbjct: 6 EGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGLQAE 64 Query: 63 VIVPV 67 + P+ Sbjct: 65 DVTPL 69 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN+AKGFGFI PE G D+F H+ IQ G+++L+ GQ V F QG KG A Sbjct: 6 NGIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQAD 64 Query: 63 VIVPV 67 + V Sbjct: 65 QVQAV 69 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGNH 60 K VKWF+ KG+GFI GGEDIF H+S I + ++ L V+F++ Q KG Sbjct: 3 RKSKVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQ 62 Query: 61 ASVIVPVEVEAAV 73 A + + + AV Sbjct: 63 AKNVCEICQQGAV 75 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQ--MDGYRTLKAGQSVQFDVHQGPKGNH 60 GTVKWF+ KG+GF+ + D+F H+S I G++TL GQ V+F+V Q KG Sbjct: 4 TGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGPR 63 Query: 61 ASVIVPV 67 A + + Sbjct: 64 AKNVRVL 70 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 92.1 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD--GYRTLKAGQSVQFDVHQGPKGNHA 61 G+VKWFN KG+GFI E GG+D+F H+ + G +L GQ V F++ +G KG A Sbjct: 7 GSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGPQA 66 Query: 62 SVIVPV 67 + P+ Sbjct: 67 ENVTPL 72 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 91.7 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 G VKWFN G+GFIC ED+F H S I + R++ G+ VQFD+ G KG Sbjct: 38 GVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAGAKGT 97 Query: 60 HASVIVPV 67 A+ + + Sbjct: 98 EAANVTGL 105 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 91.3 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M+ GTVKWFN KG+GFI P+ GG+D+F H S ++ G R L GQ + ++V + G Sbjct: 1 MDTGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGK 60 Query: 60 HAS 62 A+ Sbjct: 61 DAA 63 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 91.3 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 22 EGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKG 81 Query: 59 NHASVIV 65 + A+ + Sbjct: 82 SEAANVT 88 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 29/65 (44%), Positives = 38/65 (58%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKW++ AKGFGF+ + GG+D+F H S + G +L GQ V V +G KG A Sbjct: 178 GTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGREAQS 237 Query: 64 IVPVE 68 I E Sbjct: 238 ITVAE 242 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 33/70 (47%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H ++ G+ L G + QG KG + I Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 65 VPVEVEAAVA 74 V+ A A Sbjct: 125 TSVDTSTAEA 134 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 37/67 (55%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G VKWFN KGFGFI P G E+IF H + I G+R++ G+ V++DV A Sbjct: 5 ARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAPKA 64 Query: 62 SVIVPVE 68 + + Sbjct: 65 VNVTGPD 71 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 90.9 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 G VKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KG Sbjct: 89 TGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIGEKG 148 Query: 59 NHASVIV 65 N A+ + Sbjct: 149 NEAANVT 155 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E G VKWFN KGFGFI E G ED+F H+ + L GQ V++ + QG KG A Sbjct: 78 EVGHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQA 136 Query: 62 SVIVPVE 68 +V ++ Sbjct: 137 EQVVILD 143 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 90.5 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 KG VKWFN G+GFI + DIF H S I + R+L+ G+ V+F V +G KG Sbjct: 27 KGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKG 86 Query: 59 NHASVIV 65 + AS + Sbjct: 87 DEASEVT 93 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW++ KGFGF+ + GGE +F H S + G +LK GQ V+F V +G +G A Sbjct: 6 PTGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALP-SGVTSLKTGQRVEFGVVEGRRGQQA 63 Query: 62 SVIVPVE 68 + ++ Sbjct: 64 LSVRTLD 70 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQM--DGYRTLKAGQSVQFDVHQGPKG 58 M +GTV+WF+ +GFGF+ + G +D+F H S I DG ++L+ GQSV+F++ +G +G Sbjct: 1 MPQGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRG 60 Query: 59 NHASVIVPVEVEAAVA 74 A + A A Sbjct: 61 PQARRVQITGDSAVEA 76 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TV W++ KGFGF+ P+ G D F H ++ G L G V F V G +G A + Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 65 VPV 67 V Sbjct: 223 RVV 225 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G V ++ +GFGFI P+ GG D+F H S ++ + L G V+F V Q +G A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREG--QELYEGDRVRFQVRQSDRGPQAD 312 Query: 63 VI 64 + Sbjct: 313 RV 314 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTV W+ KG+GF+ P+GGG +IFAH S I G + GQ V F V +G KG A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 37/63 (58%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKW++ AKGFGF+ GG+D+F H S + G +L GQ V V +G KG AS Sbjct: 216 TGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGREAS 275 Query: 63 VIV 65 I Sbjct: 276 SIT 278 Score = 79.7 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 33/70 (47%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H ++ G+ L G + QG KG + + Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 65 VPVEVEAAVA 74 V+ A A Sbjct: 141 NSVDTSTAEA 150 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGNHA 61 G+ KWFN +KG+GF+ + GED+F H S + M G+R+L G+ V + + + KG A Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKGREA 114 Query: 62 SVI 64 + Sbjct: 115 YAV 117 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 + GTVK+FN KGFGFI P+ G +D+F H S ++ G R+L GQ V FDV KG Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 60 HASV 63 A Sbjct: 63 KAVN 66 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 KG VKWFN G+GFI + DIF H S I + R+L+ G+ V+F V +G KG Sbjct: 27 KGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKG 86 Query: 59 NHASVIV 65 + AS + Sbjct: 87 DEASEVT 93 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 90.1 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWFN +KGFGFI + G E+IF H+ +I +G R LK GQ V F KG A Sbjct: 81 EEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQA 139 Query: 62 SVIVPV 67 + P+ Sbjct: 140 ENVEPL 145 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 38/67 (56%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTVKW+N KGFGFI EGGG+D+F H + + G L GQ V V QGPKG A Sbjct: 171 RVGTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEA 230 Query: 62 SVIVPVE 68 I + Sbjct: 231 RGIEVAD 237 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D+F H ++ G ++ G + V QG KG + + Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 65 VPVEVEAAVA 74 + V+ A A Sbjct: 129 LEVDTSTAEA 138 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 89.4 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ +GFGFI +G D+ H+S ++ G RTL G + +V +G A Sbjct: 36 GAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQARR 95 Query: 64 IVPVEVEAAV 73 I+ +++ A Sbjct: 96 ILAIDLSTAT 105 Score = 65.9 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 33/61 (54%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWFN KG+GF+ +G +DIF H T++ G L ++ + +G KG A + Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVEL 195 Query: 65 V 65 + Sbjct: 196 I 196 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++ +FDV +G KG Sbjct: 61 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEGGKGA 119 Query: 60 HASVIV 65 A+ + Sbjct: 120 EAANVT 125 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 GTVKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KG Sbjct: 25 TGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGEKG 84 Query: 59 NHASVIVPVEVEA 71 + A+ + EA Sbjct: 85 HEAANVTGPSGEA 97 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 89.0 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT-LKAGQSVQFDVHQGPKGNH 60 ++G VKWFN KG+GFI P G +D+F H + + G+ L+ G+ V ++V + PKG Sbjct: 3 QRGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLS 62 Query: 61 ASVIVPVEVEA 71 A + + + Sbjct: 63 AMNVERLSRSS 73 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 88.6 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 27/63 (42%), Positives = 38/63 (60%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVK F+ GFGFI P+ GED+F H S+++ D YR+L ++ V G G + + Sbjct: 7 KGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRNKA 66 Query: 63 VIV 65 V V Sbjct: 67 VDV 69 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 88.6 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 7/68 (10%) Query: 4 GTVKWFNNAKGFGFIC-------PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP 56 G KWFN GFGFI P D+F H S + M+G+R+L+ G++++F + Sbjct: 6 GVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKSS 65 Query: 57 KGNHASVI 64 KG A + Sbjct: 66 KGLEAVRV 73 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 43/66 (65%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G+VKWF + KGFGF+ + GG+D+F H S ++ G +L++G+ V V + PKG A+ Sbjct: 134 EGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGREAT 193 Query: 63 VIVPVE 68 I ++ Sbjct: 194 WIQLLD 199 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 32/65 (49%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 + TVKWFN KGFGF+ P G D F H S + G L G V + GPKG Sbjct: 44 RATVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVI 103 Query: 63 VIVPV 67 +V V Sbjct: 104 RLVDV 108 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 88.2 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 KGTVKWFN G+GFI EDIF H + I + R+L + V FD+ +G KG Sbjct: 22 KGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKG 81 Query: 59 NHASVIVPVE 68 A+ + + Sbjct: 82 LEAASVTGPD 91 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 88.2 bits (218), Expect = 8e-17, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 36/70 (51%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VK F+ GF FI P+ G ED+F H S+++ DGYR+L ++ V G + Sbjct: 7 KGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRTKA 66 Query: 63 VIVPVEVEAA 72 V V A Sbjct: 67 VDVTAPGSDA 76 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 87.8 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M G VKWFN AKGFGFI PE GG+D+F H + ++ G L G V +++ + + G Sbjct: 1 MANGVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRRSGK 60 Query: 60 HASVIVPVEVEAA 72 ++ + V + A Sbjct: 61 TSAGNLRVTGQGA 73 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 34/53 (64%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 VKWFN+ KGFGFI P+ GG DIF H S ++ G R L GQ V +++ Q + Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQ-GPK 57 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + K Sbjct: 31 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAAKK 90 Query: 58 GNHASVIV 65 G+ A+ + Sbjct: 91 GSEAANVT 98 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 87.8 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICP-EGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KG +WFN KGFGF+ + +DIF H + I+ +G+R+L G+ V+F + QG KG A Sbjct: 14 KGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGPQA 73 Query: 62 SVIVPVEVEA 71 IV ++ Sbjct: 74 IEIVRFTKQS 83 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG 58 G VKWFN +G+GF+C EDIF H S I +++ G+ + FD+ +G KG Sbjct: 30 TGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKG 89 Query: 59 NHASVIVPVE 68 N A+ + ++ Sbjct: 90 NEAANVSAID 99 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 87.4 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG---YR-TLKAGQSVQFDVHQGPKGN 59 GTV WF KG+GFI + ED+F H++ I YR ++ G+ V+FDV QG G Sbjct: 70 GTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGEWGT 129 Query: 60 HASVIV 65 A+ + Sbjct: 130 EAANVT 135 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN KGFGFI E G +D F H+S I G++T+ G+ V+FD+ G KG A+ Sbjct: 3 GKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQATN 61 Query: 64 IVP 66 +V Sbjct: 62 VVS 64 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 87.1 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGG-EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G +KWF+ AKG+GFI P+ G DI H ++++ DG++T G + +V G +G Sbjct: 28 GHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGLQCF 87 Query: 63 VIVPVEVEAAV 73 ++ ++ A+ Sbjct: 88 RVLSMDASTAI 98 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG++KWFN KGFGFI + G E +F H+ ++ R +K GQ V + V + +G A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 63 VIVPV 67 + P+ Sbjct: 119 DVSPL 123 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 40/70 (57%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G +KWF+ +KG+GF+ P+ G D+ H + ++ DGY+T G + + Q KG A Sbjct: 71 GVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQAFR 130 Query: 64 IVPVEVEAAV 73 IV ++ A+ Sbjct: 131 IVSMDESTAI 140 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 35/66 (53%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN +GFGF+ G DIF H T++ G L+ GQ V G KG Sbjct: 160 LERAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMM 219 Query: 61 ASVIVP 66 A+ I P Sbjct: 220 AAEIQP 225 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 86.7 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 37/69 (53%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWFN KGFGF+ G EDIF H ++ G L G+ ++ QGPKG A + Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 65 VPVEVEAAV 73 P++ A V Sbjct: 195 RPLDAPAPV 203 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G +KWF+ KG+GF+ + G D+ H + ++ DG+ G V + +G KG Sbjct: 35 GRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQVFR 94 Query: 64 IVPVEVEAA 72 ++ ++ A Sbjct: 95 VISLDAPAP 103 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWF+ A+G+GF+ P+ G +D+F H+S + + L+ G ++F++ + KG + Sbjct: 1 METGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLN 57 Query: 61 ASVIVPVEVE 70 A I + Sbjct: 58 AVNIEALTEP 67 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 86.3 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 + GTVK+F KGFGFI P+ G D+F H S ++ G TL +GQ + F+ KG Sbjct: 122 QSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKGP 181 Query: 60 HASVIVPVEVEAA 72 A + + AA Sbjct: 182 KAVELRLEDGPAA 194 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 85.9 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 4/76 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGP 56 M +GTVK+F KGFGFI P+ GGED+F HY+ I+ DG ++ L G V++ Sbjct: 1 MAQGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSG 60 Query: 57 KGNHASVIVPVEVEAA 72 KG A +V + A Sbjct: 61 KGTQAKDVVKLSSGEA 76 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 85.9 bits (212), Expect = 4e-16, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTV WF+ KGFGFI P+ +F + I+ GYRTL AG V + + G A Sbjct: 52 RHGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEA 111 Query: 62 SVIVP 66 + P Sbjct: 112 VAVRP 116 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 36/63 (57%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVK+FN KGFGFI + G D F H S ++ G +L G + F++ +G +A+V Sbjct: 237 GTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKYAAV 296 Query: 64 IVP 66 + Sbjct: 297 NLA 299 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VK+FN+ KGFGF+ + GGED+F H S ++ G L GQ + F + G ++ Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLVDRG-GRVSA 195 Query: 63 VIVPVEVE 70 + +E E Sbjct: 196 TNLGIEGE 203 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 85.5 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK F++A GFGFI + F Y+ I+ GY++L+ GQ V++ + QG KG Sbjct: 1 MRTGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQ 60 Query: 61 ASVI 64 + Sbjct: 61 CINV 64 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 85.5 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 39/66 (59%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ G VKWFN ++G+GFI P GG D++ + + I ++L GQ V+F ++ G Sbjct: 3 LKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHGPS 62 Query: 61 ASVIVP 66 A+ ++ Sbjct: 63 AADVIA 68 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 85.1 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 3 KGTVKWFNNAKGFGFIC-------PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGFI P D+F H S + M+G+R+LK G+ V+F + Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 90 Query: 56 PKGNHASVIV 65 KG + + Sbjct: 91 SKGLESIRVT 100 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 84.8 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQM---DGYRTLKAGQSVQFDVHQGPKGNH 60 G VKW+N KG+GFI + ED+F H S I ++L + V FDV +G KGN Sbjct: 5 GKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKGNE 64 Query: 61 ASVIV 65 A + Sbjct: 65 AMNVT 69 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 84.8 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 ++G KWF++ KGFGFI E G D+F H + I+ G+R L G+SV+F V G G Sbjct: 88 QRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRK 146 Query: 62 SVIV 65 +V V Sbjct: 147 AVSV 150 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 84.8 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ GTVK+FN KGFGFI + G+DIF H S + + V+F + G KG + Sbjct: 136 LQTGTVKFFNETKGFGFIKSDSSGDDIFVHVSAL----IDQIHENDKVRFSIEHGRKGLN 191 Query: 61 ASVI 64 A I Sbjct: 192 AVNI 195 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 84.4 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 34/62 (54%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTVK+FN KGFGFI + G D F H S ++ G L G + F++ +G +A Sbjct: 85 ASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKYA 144 Query: 62 SV 63 +V Sbjct: 145 AV 146 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 84.4 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 + G VK+FN KGFGFI P+ GG DIF H S +Q G L Q V ++ KG Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 60 HASVIV 65 A I Sbjct: 75 KAVNIT 80 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 84.0 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KGTVK F++ +GFI + F Y +I+ +GY+ L GQ V++ + QG KG Sbjct: 1 MRKGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQ 60 Query: 61 ASVI 64 + Sbjct: 61 CINV 64 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 37/68 (54%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF+ KG+GFI E GG D+ H S ++ G T G V + + KG A+ Sbjct: 15 RGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQAT 74 Query: 63 VIVPVEVE 70 I+ +E+ Sbjct: 75 RIINLEIS 82 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWF+ AKG+GF+ EDIF H ++ G L+ GQ ++ +G KG A+ I Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 65 VP 66 P Sbjct: 168 EP 169 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 E G VK+FNN KGFGFI P+ GG DIF H S +Q G L Q V FD KG Sbjct: 3 ETGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGP 62 Query: 60 HASV 63 A Sbjct: 63 KAVN 66 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 4 GTVKWFNNAKGFGFICPE-------GGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP 56 G KWFN GFGF+ D+F H S + M+G+R+LK G++V+F + Sbjct: 36 GVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRSS 95 Query: 57 KGNHASVIV 65 KG + + Sbjct: 96 KGLESLQVT 104 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 83.6 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 5/67 (7%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKG- 58 G VKWFN G+GF+ + ED+F H + I + R++ G++V+FDV +G KG Sbjct: 28 GVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKGL 87 Query: 59 NHASVIV 65 A+ + Sbjct: 88 PEAANVT 94 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 83.2 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Query: 3 KGTVKWFNNAKGFGFIC-------PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGFI P D+F H S + M+G+R+LK G+ V+F + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 56 PKGNHASVIV 65 KG + + Sbjct: 117 SKGLESIRVT 126 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQ-MDGYRTLKAGQSVQFDVHQGPKGN 59 MEKG +K+F+ ++GFGFI P G ED+F H + I M L+ GQ+++++ Q KG Sbjct: 1 MEKGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGL 60 Query: 60 HASVIVPVEVEA 71 A P + + Sbjct: 61 SALNAAPADETS 72 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME VK F+ +GFGFI + ED+F H I+ ++L GQ V+FD Q KG Sbjct: 1 MEGIVVK-FDKKRGFGFIRSDKFSEDVFVHLKNIREQ--QSLSPGQKVEFDTEQTDKGLS 57 Query: 61 ASVIVPVEVEAAV 73 A ++P + + + Sbjct: 58 AINVIPGKKQTSP 70 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 33/59 (55%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M GTVK+FNN KG+GFI E G D F H + +Q G TL Q V +++ G G Sbjct: 23 MAIGTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGK 81 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 82.8 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 39/65 (60%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VK+F+ KGFGF+ + GG+D+F H ++ G +TL++GQ V+ G KG A Sbjct: 136 EGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQAD 195 Query: 63 VIVPV 67 + + Sbjct: 196 TVAII 200 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN +KGFGF+ P G D F H S ++ G + G ++ D+ G +G ++ Sbjct: 52 TVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQVVMV 111 Query: 65 VPVEVEAAV 73 V+ A Sbjct: 112 HEVDSTTAT 120 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 34/65 (52%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKW++ KGFGFI P G +D F H + + G L GQ V + QG KG Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVL 194 Query: 63 VIVPV 67 I V Sbjct: 195 SIRLV 199 Score = 52.4 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIV 65 V WFN KGFGF+ G E + ++ G R + G ++ + + P+G+ + + Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 66 PVEVEAA 72 + + A Sbjct: 106 EISSQIA 112 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 82.4 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 39/63 (61%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG V WFN AKGFGF+ + G D+F H S I +G+R+L+ + V+F++ G + + Sbjct: 45 KGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRYKA 104 Query: 63 VIV 65 V V Sbjct: 105 VKV 107 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 82.4 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G KWFNN KG+GFI E G ED+F H S I DG+R+L + V+ +V A Sbjct: 5 NGVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRKKAI 63 Query: 63 VIV 65 + Sbjct: 64 HVT 66 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 82.1 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWF+ KG+GFI + G E F H S I M G+R L+ G+ V + V KG+ A Sbjct: 13 EHGTVKWFDPVKGYGFIAGDNGKE-TFVHQSDILMRGFRHLETGERVSYRVKATEKGDKA 71 Query: 62 SVIVP 66 ++ Sbjct: 72 IDVIS 76 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 82.1 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 6/59 (10%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLK------AGQSVQFDVHQ 54 +G VKWFN KGFG+I P+ G D+F H S ++M+G+R G SV+FDV Sbjct: 11 RRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVEH 69 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 81.7 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 4 GTVKWFNNAKGFGFICPE-------GGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP 56 G KWFN GFGF+ D+F H S + M+G+R+LK G++V+F + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 57 KGNHASVIV 65 KG + + Sbjct: 102 KGLESIRVT 110 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 81.7 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQGPKGN-H 60 +G V F++ KGFGFI P+ GGED+F H+S I+ DG YR+L V+F V Sbjct: 15 RGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNKYQ 74 Query: 61 ASVIVP 66 A + Sbjct: 75 AVDVTA 80 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWFN++KG GFI + D+F HY +I +G++TLK GQ+V F + + G AS Sbjct: 6 KGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQAS 64 Query: 63 VI 64 + Sbjct: 65 EV 66 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G +KWFN KGFGFI + G E +F HY ++ R++K GQ V + V +G A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 63 VIVPV 67 + V Sbjct: 134 GVKAV 138 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-----YRTLKAGQSVQFDVHQGPK 57 +G VKW++ + +GFI G +DIF H + I RTL + V FD+ +G Sbjct: 67 QGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKN 126 Query: 58 GNHASVIV 65 G A+ + Sbjct: 127 GPEAANVT 134 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 ++G VKWFN KGFGFI + G E++F H+ +Q G R+L+ G V+FD +G A Sbjct: 11 QRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQA 69 Query: 62 SVI 64 + Sbjct: 70 DNV 72 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTV F+ KG+GFI P+ GGED+F H S + + L+ G V+F+ G +G Sbjct: 1 MKTGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTK 60 Query: 61 ASVI 64 A + Sbjct: 61 AMTV 64 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD--GYRTLKAGQSVQFDVHQGPKGN 59 E+GT +WF+ KG+GFI G +DIF HYS+IQ + G +TL V+F V +G +G Sbjct: 6 EQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRGA 64 Query: 60 HASVIVPV 67 A +V V Sbjct: 65 QAVDVVVV 72 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 23/41 (56%), Positives = 33/41 (80%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTL 42 KG+VKWF+ KGFGFI P+ GG+D+F H S+I+ +G+R+L Sbjct: 11 RKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW+++ KGFGF+ E G ED++ S + G LKAGQ V+F + G +G A Sbjct: 52 PTGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQA 109 Query: 62 SVIVPVEVEAAV 73 + ++ ++ Sbjct: 110 LSLKLLDPPPSL 121 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 80.5 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 4/68 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M++G VK+FNN KGFGFI + EDIF H S + ++ VQF+V QG KG + Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGL----IDEIREDDRVQFEVEQGKKGLN 56 Query: 61 ASVIVPVE 68 A + ++ Sbjct: 57 AVNVEVID 64 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKWFN KGFGFI P+ GG D+F H + ++ G TL V++D+ + G A+ Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVE-KNGKVAA 67 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 80.1 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW++ KGFGF+ E G ED++ S + G LK+GQ V+F V G +G A Sbjct: 15 PTGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQA 72 Query: 62 SVIVPVEVEAAVA 74 + ++ +++ Sbjct: 73 LSLKLIDPPPSLS 85 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 79.7 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G V WFN+ KGFGFI + G D+F HY+ I DG+++L+ G+ V + V A Sbjct: 3 REGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPKA 61 Query: 62 SVIVPVEVEA 71 + + A Sbjct: 62 VDVHLADEGA 71 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 79.4 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G V F++ KG+GFI P+ GGED+F H + + G TL +G V FDV G +G Sbjct: 1 MAQGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPGT-TLTSGTRVVFDVLDGGRGLK 59 Query: 61 ASVI 64 A + Sbjct: 60 AYDV 63 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 79.4 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++KG VKWF+ G+GFI PE GG DI+ H + I ++L AGQ V+F G Sbjct: 3 LKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPS 62 Query: 61 ASVIVP 66 A ++ Sbjct: 63 AEDVIA 68 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 79.4 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VK+FN +KG+GFI + DIF H + + T++ VQF+V G KG + Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNG---ITIREKDRVQFEVVDGKKGLN 57 Query: 61 ASVIVPVEVE 70 A + ++ + Sbjct: 58 AVKVKKIDSD 67 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 79.0 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN- 59 M+ G+VK+FN KG+GFI P+ G DIF H + D R V+++V +GP G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRL 59 Query: 60 HASVIVPVE 68 A + ++ Sbjct: 60 RAERVALID 68 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 79.0 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 37/66 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN KGFGF+ G EDIF H T++ G L+AGQ V +G KG Sbjct: 105 LERAIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLM 164 Query: 61 ASVIVP 66 + I P Sbjct: 165 TAEIYP 170 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGG-EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G +KWF+++KG+GF+ P+ DI H S +Q DG++T G V V + +G Sbjct: 15 TGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGLKC 74 Query: 62 SVIVPVEVEAAV 73 + +++ +AV Sbjct: 75 IQVKSIDLSSAV 86 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 78.6 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWF+ KG+GF+ GGED+F H+S ++ D +L G V+++V + +G +A Sbjct: 134 EQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPNA 191 Query: 62 SVIVPV 67 + + Sbjct: 192 RRVRVL 197 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 78.6 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G + F+ +G+GFI P+ GGED+F H + + D R L G V+FDV +G +G AS Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 64 IV 65 + Sbjct: 68 VR 69 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 78.6 bits (193), Expect = 6e-14, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 37/65 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTV+ F+ KG+G+I P GG +I H+S I L AGQ+V FD+ Q +G Sbjct: 1 MAEGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPE 60 Query: 61 ASVIV 65 A + Sbjct: 61 AERVQ 65 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 78.2 bits (192), Expect = 8e-14, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN AKG+GF+ + DIF H T++ G L+ G++V +GPKG Sbjct: 133 LEQAKVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLV 192 Query: 61 ASVI 64 + I Sbjct: 193 VAEI 196 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGG----EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 G VKWF+ KG+GFI P+ +D+ H ++++ G G + DV + PKG Sbjct: 28 TGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRPKG 87 Query: 59 NHASVIVPVEVEAA 72 + +V ++ A Sbjct: 88 WQVAEVVDLDESTA 101 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 78.2 bits (192), Expect = 9e-14, Method: Composition-based stats. Identities = 25/51 (49%), Positives = 29/51 (56%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ 54 G VKWFN K FGFI E GG+D+F H S + G L GQ V FD+ Sbjct: 7 GKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLED 57 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%) Query: 3 KGTVKWFNNAKGFGFICPEGG-GEDIFAHYSTIQMDG-----YRTLKAGQSVQFDVHQGP 56 KG VKW++ +GFI + G D+F H + I RTL G+ V FD+ QG Sbjct: 7 KGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQGK 66 Query: 57 KGNHASVIV 65 +G A+ + Sbjct: 67 QGPEAANVT 75 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 77.8 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN- 59 M GT+K +N+ KG+GFI P+ GG D+F H + +R + GQ + + G KG Sbjct: 1 MNFGTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHRP-EIGQVISYGTTSGDKGRL 59 Query: 60 HASVIVPVEVEAA 72 A + +E +++ Sbjct: 60 RACNVQYMEDKSS 72 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGNHA 61 G V F++ KGFGFI P+ G +D+F H+S I+ D GYRTL V+F + A Sbjct: 15 TGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKYQA 74 Query: 62 SVIVP 66 + Sbjct: 75 VDVTA 79 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 77.4 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G +KWF+ KG+GFI + GG D+F H S + TL+ G +++ + + Sbjct: 1 MPTGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVS 60 Query: 61 ASVIVPVEVEAAV 73 A + + EAA Sbjct: 61 AHDLSLMPDEAAT 73 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ AKGFGF G ED+F H ++ G+ L+ G++V V GP+G A+ + Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 65 VPVEV 69 + Sbjct: 176 RTWDA 180 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KGFGF+ + GG DI H + ++ G ++ G V +G A Sbjct: 24 GVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQAVE 83 Query: 64 IVPVEV 69 I+ +E Sbjct: 84 IIAIEA 89 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 77.0 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 M GT+ WF+ G+GFI P+ GG DI + G R+L+ GQ V + + + G Sbjct: 1 MLTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFG 58 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 36/66 (54%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ G VKW++ + G G I P GG+D++ + + I + L+ GQ V+F +G + Sbjct: 3 LKMGFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRRSQM 62 Query: 61 ASVIVP 66 A ++ Sbjct: 63 AEDVIA 68 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 76.7 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 MEKGT+ F++ +G+GFI P GGG+D+F H + D + AG V ++V Q +G Sbjct: 1 MEKGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLK 59 Query: 61 ASVIVPVEVEAA 72 + +V A+ Sbjct: 60 VASVVLESAPAS 71 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 35/68 (51%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+ VKWFN KG+GF+ +G DIF H T++ G L+ G V +GPKG Sbjct: 134 ERAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVV 193 Query: 62 SVIVPVEV 69 + I E Sbjct: 194 AEITSGED 201 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGG----EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 G VKWF+ KG+GFI P+ G +D+ H ++++ G T G + DV + PKG Sbjct: 20 GRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRPKGW 79 Query: 60 HASVIVPVEVEAA 72 S +V ++ AA Sbjct: 80 QVSEVVDLDESAA 92 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 76.3 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 3 KGTVKWFNNAKGFGFICPEG---GGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP-KG 58 +G++KW+N KG+GFI PEG G+D+F H S + G L GQ V +D Q G Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 59 NHASVIVPV 67 +++ + + Sbjct: 64 KYSAENLKL 72 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KG VK+FN++KGFGFI EG +D F H S + ++ G V+F++ +G KG + Sbjct: 1 MNKGIVKFFNDSKGFGFITEEGQEKDHFVHISGL----IDEVREGDEVEFELKEGNKGLN 56 Query: 61 ASVIVPV 67 A + + Sbjct: 57 AVNVRVL 63 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLK---AGQSVQFDVHQGPKGN 59 KG VKWFN KG+GFI + E F H+ +I + R LK + V FD+ + KG Sbjct: 6 KGKVKWFNKNKGYGFIITDDNKE-YFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKGI 64 Query: 60 HASVIVPV 67 A I+ V Sbjct: 65 QAINIIRV 72 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+ AKGFGF+ + GG DI H + ++ G ++ G ++ H+ +G A+ Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 63 VIVPV 67 + + Sbjct: 72 QVHAI 76 Score = 68.2 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E VKWF+ +KGFGF G +DIF H ++ G L+ G+++ V G +G+ A Sbjct: 104 EPARVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMA 163 Query: 62 SVIVPVEV 69 + + E Sbjct: 164 AEVHAWET 171 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ +KGFGF+ GG DI H + ++ G ++ G V + + P+G A Sbjct: 13 GVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQAVE 72 Query: 64 IVPVEVEAAV 73 ++ + A+ Sbjct: 73 VLEITPPASE 82 Score = 70.1 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ AKGFGF D+F H ++ G+ L G+++ V G +G A+ I Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 Query: 65 VPVEVEAAVA 74 + E A A Sbjct: 167 LSWERAAIEA 176 >UniRef50_Q2RNN9 Cold-shock DNA-binding protein family n=2 Tax=Rhodospirillum RepID=Q2RNN9_RHORT Length = 210 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 34/66 (51%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 TVKWFN KGFGF+ G D F H S +Q GY L G ++ D+ G KG S Sbjct: 6 TATVKWFNATKGFGFVRVSDGEPDAFLHISVLQRAGYSELPEGATIVCDLAPGQKGMQVS 65 Query: 63 VIVPVE 68 I VE Sbjct: 66 EIYEVE 71 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 36/58 (62%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VK+F+ KGFGF+ P+GGG+D++ T+Q G L+ GQ V+ + G KG A Sbjct: 147 GVVKFFSADKGFGFVVPDGGGKDVYVGSRTLQDCGVSVLEQGQRVRMSIRMGKKGPMA 204 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 75.5 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KG VK F+ KG+GFI GE IF HYS I+ R L + V + QG KG Sbjct: 1 MLKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 61 ASVIVPV 67 A+ + + Sbjct: 60 AAHVRVL 66 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 75.1 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI P+ G +D+F H + + D + L G V++D + +G Sbjct: 7 MLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPK 65 Query: 61 ASVIV 65 A ++ Sbjct: 66 AVLVR 70 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 75.1 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI P+GGG+D+F H +T+ D + L G V+++ + +G Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 61 ASVIVPV 67 A + + Sbjct: 60 ALTVRVL 66 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 74.7 bits (183), Expect = 8e-13, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-NH 60 +G + W++N KG+GFI P GGG D+F H S+++ +G+ L AG ++++ G Sbjct: 110 ARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKLQ 169 Query: 61 ASVIVP 66 A + Sbjct: 170 AINVTA 175 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 74.4 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 36/64 (56%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 V+WF+ G+G I + GE++F ++ I +GYRT+ +V F++ QGP G A + Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 Query: 65 VPVE 68 E Sbjct: 61 QKSE 64 >UniRef50_B0W4X1 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0W4X1_CULQU Length = 247 Score = 74.4 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 4/54 (7%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDV 52 GTVKWFN GFGFI GED+F H S+I R++ G+ V+F V Sbjct: 53 TGTVKWFNVKDGFGFITRHDTGEDLFVHQSSILRPNSRHSVRSVGEGEVVEFGV 106 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA------GQSVQFDVHQGPKGN 59 V WFN +G+G++ P G ED+F H S +QMDG+R++ G ++F++ + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDER-R 102 Query: 60 HASVIV 65 A + Sbjct: 103 RAKNVT 108 >UniRef50_Q0APJ7 Cold-shock DNA-binding protein family n=1 Tax=Maricaulis maris MCS10 RepID=Q0APJ7_MARMM Length = 174 Score = 74.0 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (55%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ +G+GF+ + D+F H +T++ G+ ++ G ++ +GPKG A+ I Sbjct: 109 VVKWFDALRGYGFVTCDNVEGDVFLHAATLRRAGFEDIQPGDRIEVRCVEGPKGALAAEI 168 Query: 65 VPV 67 Sbjct: 169 KVA 171 Score = 65.9 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 32/72 (44%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKW++ A+G+GFI G DI H S ++ G + QG KG A Sbjct: 17 EGRVKWYDPARGYGFIDASDGEGDILLHASCLRRFGQGPALPNAKIVCKAVQGDKGRQAV 76 Query: 63 VIVPVEVEAAVA 74 +V + A Sbjct: 77 ELVEMTGGDNEA 88 >UniRef50_Q2RQP4 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQP4_RHORT Length = 70 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 22/41 (53%), Positives = 26/41 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT 41 M GTVKWFN KGFGFI P+ GG D F H S ++ R+ Sbjct: 1 MTTGTVKWFNVQKGFGFIAPDDGGSDAFVHISAVERSSDRS 41 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG V WFN+ KGFGFI + G DI+ HYS + DG++TL G+ V F+V A+ Sbjct: 4 KGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKAT 62 Query: 63 VIVPV 67 + + Sbjct: 63 AVRII 67 >UniRef50_Q5GRS9 Cold shock protein n=7 Tax=Wolbachia RepID=Q5GRS9_WOLTR Length = 84 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 11/70 (15%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYR--TLK--------AGQSVQF 50 ME G +KWFN KG+GFI PE G DIF H ST++ G R +L+ G+ V + Sbjct: 1 MEFGNIKWFNAEKGYGFIKPEANGNDIFVHISTLERSGIRPDSLRGENKEKGIKGERVSY 60 Query: 51 DVHQGPKGNH 60 ++ + +G + Sbjct: 61 ELKE-ERGRN 69 >UniRef50_Q2MF47 Putative cold shock protein n=1 Tax=Streptomyces rimosus subsp. paromomycinus RepID=Q2MF47_STRRY Length = 76 Score = 73.2 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGN 59 M G VKWF++ +G G + GGG D+ A+ S IQ D RTL G+ V F++ + +G Sbjct: 1 MPHGVVKWFDHERGAGLVAQTGGGPDVLAYRSAIQGDEPARTLTTGERVSFNLVEDFEGI 60 Query: 60 HASVIVPV 67 A I + Sbjct: 61 RAENIYRL 68 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 73.2 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V+W++ KG+GFI + G +D+F + + + ++L G V+F V +G KG Sbjct: 1 MPNGRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQ 58 Query: 61 A 61 A Sbjct: 59 A 59 >UniRef50_C8V3H1 Cold shock NA binding domain protein (JCVI) n=1 Tax=Aspergillus nidulans FGSC A4 RepID=C8V3H1_EMENI Length = 111 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKW+N+A+GFGFI + GGE I S + + LK G V ++ P A Sbjct: 49 GTVKWYNDAQGFGFITSDFGGELILRRQSI--TEHTQRLKEGMKVSYEAVHLPMLLMAEQ 106 Query: 64 IVPVE 68 + P E Sbjct: 107 VQPEE 111 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI PE GGED+F H + + + ++AG V+F++ G +G Sbjct: 1 MAAGRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLLI-PESAVRAGLMVEFEIEDGDRGLK 59 Query: 61 ASVIV 65 AS + Sbjct: 60 ASEVR 64 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 72.8 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G + F++++GFGFI PE GG D+F H + I +D L+ G+ +FDV +G +G A Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDIGLD-EDELRQGRVFEFDVTEGDRGPKAIN 64 Query: 64 IVPV 67 + V Sbjct: 65 LSAV 68 >UniRef50_UPI0001B5872A cold-shock DNA-binding domain protein n=1 Tax=Streptomyces sp. C RepID=UPI0001B5872A Length = 71 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 23/38 (60%), Positives = 27/38 (71%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG 38 M GTVKWFN+ KGFGFI + GG D+F H+S I DG Sbjct: 1 MATGTVKWFNSEKGFGFISQDDGGPDVFVHFSPIPGDG 38 >UniRef50_Q03EZ0 Cold-shock DNA-binding protein family n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03EZ0_PEDPA Length = 69 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTV+ F+ KG+GFI G+ +FAHY+ IQ + Y+TL+ G+ V+ + GPKG Sbjct: 1 METGTVESFDKEKGYGFIE-TASGDKVFAHYTVIQSEDYKTLEVGEKVKLMLADGPKGLI 59 Query: 61 ASVIVPVEVE 70 A + EVE Sbjct: 60 AVKVFREEVE 69 >UniRef50_A9KN41 Cold-shock DNA-binding domain protein n=22 Tax=Firmicutes RepID=A9KN41_CLOPH Length = 70 Score = 72.4 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY-RTLKAGQSVQFDVHQGPKGNHA 61 GTVKW+++ +G+GF+ G D+F H+S I+ G+ + + G+S+ FD+ + KG A Sbjct: 5 TGTVKWYDSERGYGFVSTNDG-RDVFLHHSQIKEKGFDKEVHEGESIGFDIIEQEKGPAA 63 Query: 62 SVI 64 + Sbjct: 64 INV 66 >UniRef50_Q5Z0N3 Putative cold shock protein n=2 Tax=Bacteria RepID=Q5Z0N3_NOCFA Length = 89 Score = 72.4 bits (177), Expect = 5e-12, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 3/71 (4%) Query: 3 KGTVKWFNNAKGFGFICP-EGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTV WF+ KGFGFI P EG +F +S+I+M GYRTL GQ V+F G A Sbjct: 16 HGTVAWFDAPKGFGFIEPAEGPRGPVFVDFSSIEMSGYRTLVEGQPVRFVRSAGR--AEA 73 Query: 62 SVIVPVEVEAA 72 + P+ + Sbjct: 74 VAVRPLAETGS 84 >UniRef50_C5S7F5 Cold-shock DNA-binding domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7F5_CHRVI Length = 264 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 + +GT+ +++AKGFGFI P GG+D+F H S + M + G + F P+G Sbjct: 10 LREGTLVRWDDAKGFGFIRPNDGGKDVFVHISALPMRPVPDI--GTRLIFSATDDPQGRG 67 Query: 61 ASVIVPVEVEAAV 73 V+ V A Sbjct: 68 PRVLKAVLANAVP 80 >UniRef50_B9JBF9 Cold shock protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JBF9_AGRRK Length = 68 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 30/59 (50%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M G VK F+ KG+GFI P G IF H + G TLK GQ + F++ Q G Sbjct: 1 MFNGIVKNFDLEKGYGFIQPTDGSVAIFVHAKIVVKSGLETLKKGQKLIFEIEQDGMGR 59 >UniRef50_Q0RYK4 Probable cold shock protein CspA n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0RYK4_RHOSR Length = 79 Score = 72.0 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%) Query: 10 NNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 N KGFGF P+GG +F H+S I G++TL GQ ++++V QG KG A Sbjct: 25 NGEKGFGFTAPDGG---VFVHFSEIAGRGFKTLDEGQHMEYEVSQGQKGVQAEN 75 >UniRef50_A0NS44 Cold-shock DNA-binding domain protein n=2 Tax=Labrenzia RepID=A0NS44_9RHOB Length = 66 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWF+N +G G I P+ G EDI S ++ G TL GQ V FD+ +G Sbjct: 1 MLHGNVKWFDNRRGIGTIEPQDG-EDILVDISALRRSGIDTLTEGQLVAFDLEW-RRGQM 58 Query: 61 ASVIVPV 67 + + V Sbjct: 59 VAEDLKV 65 >UniRef50_Q1AY27 Cold-shock DNA-binding protein family n=10 Tax=Bacteria RepID=Q1AY27_RUBXD Length = 69 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWF+ KGFGFI E G E++ HY+ I+ +G+R L+ G V++ + G Sbjct: 1 MGRGRVKWFSGEKGFGFIETESG-EEVLVHYTEIKGEGFRALEEGAEVEYAAVKTEDGRR 59 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G V ++ +GFGF+ PE GG D+F H + I +D +LK G V FDV + +G A Sbjct: 9 GKVVHYDTNRGFGFLAPESGGADVFLHINDIDID-ESSLKPGAKVSFDVEETDRGAKAVN 67 Query: 64 IVPVEVEAA 72 + E A Sbjct: 68 VAVTEEAPA 76 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 72.0 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FNN+KGFGFI + G++ F H S + + ++ V F++ +G KG + Sbjct: 1 MNNGTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLN 56 Query: 61 ASVIVPV 67 A + V Sbjct: 57 AVNVKLV 63 >UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Psychrobacter RepID=Q1QDZ8_PSYCK Length = 253 Score = 71.7 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-N 59 M+ G +K +N+ KG+GFI + ED+F H +++M + + GQ V F+ + K Sbjct: 3 MQSGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVRMA--QPISKGQRVYFNSERNDKNQL 60 Query: 60 HASVIVPVEVE 70 A+ + E+ Sbjct: 61 RATEVTSDELS 71 >UniRef50_A6FNL2 Cold shock DNA-binding domain protein n=2 Tax=Rhodobacteraceae RepID=A6FNL2_9RHOB Length = 135 Score = 71.7 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E VKWF+ KGFGF G ED+F H ++ G L+ G+++ V +G +G Sbjct: 61 LEPARVKWFDKGKGFGFANTFGRDEDVFVHVEVLRRSGLADLQPGEALAMRVIEGKRGRM 120 Query: 61 ASVIVPVE 68 A+ + E Sbjct: 121 ATEVCGWE 128 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacte... 109 3e-23 UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 T... 108 7e-23 UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkhold... 106 4e-22 UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A... 104 1e-21 UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaprot... 103 2e-21 UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=P... 101 7e-21 UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, s... 101 7e-21 UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID... 101 7e-21 UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=... 101 7e-21 UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organ... 101 8e-21 UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organi... 101 1e-20 UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=... 100 1e-20 UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=... 99 3e-20 UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like pr... 99 3e-20 UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacter... 99 5e-20 UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organi... 98 6e-20 UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacte... 98 7e-20 UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaprot... 98 7e-20 UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular ... 98 1e-19 UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=B... 97 1e-19 UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Pr... 96 3e-19 UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular or... 96 4e-19 UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria ... 96 4e-19 UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID... 95 6e-19 UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms R... 95 6e-19 UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=C... 95 7e-19 UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=F... 95 8e-19 UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root Rep... 94 9e-19 UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza s... 94 9e-19 UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria... 94 1e-18 UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ4... 94 1e-18 UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacte... 94 1e-18 UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobac... 94 2e-18 UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria R... 93 2e-18 UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae Rep... 93 2e-18 UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Ga... 93 2e-18 UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID... 93 3e-18 UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobact... 93 3e-18 UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Ma... 93 3e-18 UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B... 93 4e-18 UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=B... 92 4e-18 UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO 92 4e-18 UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacterace... 92 5e-18 UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular o... 92 6e-18 UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis v... 92 6e-18 UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=ce... 92 7e-18 UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Ac... 91 8e-18 UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcripti... 91 2e-17 UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria R... 91 2e-17 UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria ... 90 2e-17 UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY2... 90 2e-17 UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 90 2e-17 UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=C... 90 2e-17 UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH 90 2e-17 UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=... 90 2e-17 UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=... 90 2e-17 UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae ... 90 2e-17 UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms Re... 90 2e-17 UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putat... 90 2e-17 UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudom... 89 3e-17 UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=... 89 4e-17 UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=... 89 4e-17 UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobi... 89 4e-17 UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sp... 89 4e-17 UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing prote... 89 4e-17 UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organis... 89 5e-17 UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=c... 88 6e-17 UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Ma... 88 7e-17 UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=c... 88 7e-17 UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor... 88 8e-17 UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 88 8e-17 UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum ... 88 8e-17 UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=C... 88 9e-17 UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 88 9e-17 UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, s... 88 9e-17 UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica... 88 1e-16 UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacte... 88 1e-16 UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial ... 88 1e-16 UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melano... 88 1e-16 UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 88 1e-16 UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella mul... 88 1e-16 UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC5... 87 1e-16 UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsul... 87 2e-16 UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonel... 87 2e-16 UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fr... 87 2e-16 UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=ce... 87 2e-16 UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK... 87 2e-16 UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Ba... 86 2e-16 UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Prote... 86 3e-16 UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Ga... 86 3e-16 UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein... 86 3e-16 UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms... 86 4e-16 UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepI... 86 4e-16 UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID... 86 4e-16 UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum... 86 4e-16 UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichop... 86 5e-16 UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Ta... 86 5e-16 UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Per... 86 5e-16 UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular ... 86 5e-16 UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=P... 85 6e-16 UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarin... 85 7e-16 UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis R... 85 7e-16 UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum... 85 7e-16 UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=... 85 7e-16 UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclass... 85 7e-16 UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria R... 85 8e-16 UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria... 84 1e-15 UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar Re... 84 1e-15 UniRef50_P72192 Temperature acclimation protein B (Fragment) n=8... 84 1e-15 UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phyto... 84 1e-15 UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria R... 84 2e-15 UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Ta... 84 2e-15 UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellula... 84 2e-15 UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel C... 84 2e-15 UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organ... 83 2e-15 UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Ha... 83 2e-15 UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=A... 83 2e-15 UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rh... 83 2e-15 UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=... 83 2e-15 UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium... 83 2e-15 UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RH... 83 2e-15 UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_... 83 3e-15 UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobac... 83 3e-15 UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O130... 83 3e-15 UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=... 83 4e-15 UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=A... 83 4e-15 UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n... 83 4e-15 UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=C... 83 4e-15 UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateri... 83 4e-15 UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=ce... 82 4e-15 UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 ... 82 5e-15 UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Ps... 82 5e-15 UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing prote... 82 6e-15 UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidenc... 82 6e-15 UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Ba... 82 6e-15 UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=ce... 82 6e-15 UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID... 82 7e-15 UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n... 82 7e-15 UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=A... 81 9e-15 UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=B... 81 1e-14 UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=R... 81 1e-14 UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23... 81 1e-14 UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=... 80 2e-14 UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria... 80 2e-14 UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=A... 80 2e-14 UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tet... 80 2e-14 UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=A... 80 2e-14 UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=ce... 80 2e-14 UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae ... 79 3e-14 UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfot... 79 3e-14 UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcri... 79 3e-14 UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C... 79 4e-14 UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ru... 79 5e-14 UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza s... 79 5e-14 UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiat... 78 8e-14 UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=... 78 9e-14 UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria... 78 9e-14 UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome ... 78 1e-13 UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rh... 78 1e-13 UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia ... 78 1e-13 UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospiril... 78 1e-13 UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis R... 78 1e-13 UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 T... 77 1e-13 UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=E... 77 2e-13 UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=... 77 2e-13 UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcaniv... 77 2e-13 UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax... 77 2e-13 UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative ... 77 2e-13 UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepI... 77 2e-13 UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria R... 77 2e-13 UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN2... 77 2e-13 UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxopla... 77 2e-13 UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopol... 77 2e-13 UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Ni... 76 3e-13 UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=B... 76 3e-13 UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=L... 76 4e-13 UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 ... 76 5e-13 UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91... 76 5e-13 UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi R... 76 5e-13 UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Ta... 76 5e-13 UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sp... 75 6e-13 UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria R... 75 6e-13 UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 75 6e-13 UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa Re... 75 7e-13 UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 ... 74 9e-13 UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyce... 74 9e-13 UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces ... 74 1e-12 UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=... 74 1e-12 UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomo... 74 1e-12 UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Sa... 74 1e-12 UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 ... 74 1e-12 UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing prote... 74 2e-12 UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi R... 74 2e-12 UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56... 74 2e-12 UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia far... 73 2e-12 UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=A... 73 2e-12 UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=St... 73 2e-12 UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1... 73 3e-12 UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermuden... 73 3e-12 UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9... 73 3e-12 UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=De... 73 3e-12 UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax... 73 4e-12 UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomy... 73 4e-12 UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=L... 72 5e-12 UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Me... 72 5e-12 UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. A... 72 5e-12 UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Ba... 72 6e-12 UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepI... 72 7e-12 UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=De... 72 7e-12 UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Mi... 71 8e-12 UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia... 71 9e-12 UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pe... 71 1e-11 UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus com... 71 1e-11 UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Be... 71 1e-11 UniRef50_C0WQD2 Possible cold-shock protein n=3 Tax=Lactobacillu... 71 1e-11 UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=St... 71 2e-11 UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteri... 71 2e-11 UniRef50_Q1ZUW9 Predicted membrane protein n=2 Tax=Photobacteriu... 70 2e-11 UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Bu... 70 2e-11 UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus Re... 70 2e-11 UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fer... 70 2e-11 UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Me... 70 2e-11 UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=B... 70 2e-11 UniRef50_A6CF18 Probable cold shock protein scoF n=1 Tax=Plancto... 70 2e-11 UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Ps... 69 4e-11 UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia... 69 4e-11 UniRef50_A3ZNF7 Probable cold shock protein scoF n=4 Tax=Plancto... 69 4e-11 UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=ce... 69 4e-11 UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=R... 69 4e-11 UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriav... 69 5e-11 UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriace... 69 6e-11 UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteo... 69 6e-11 UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=R... 68 8e-11 UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreo... 68 8e-11 UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms R... 68 8e-11 UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Ca... 68 8e-11 UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=C... 68 9e-11 UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI10... 68 9e-11 UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibact... 68 9e-11 UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A... 68 9e-11 UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Pr... 68 1e-10 UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript eviden... 68 1e-10 UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Ch... 68 1e-10 UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=De... 68 1e-10 UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia far... 67 1e-10 UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bi... 67 1e-10 UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rh... 67 2e-10 UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Ba... 67 2e-10 UniRef50_C8WUZ1 Cold-shock DNA-binding domain protein n=1 Tax=Al... 67 2e-10 UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Ca... 67 2e-10 Sequences not found previously or not previously below threshold: >UniRef50_C9Y043 Cold shock-like protein cspD n=3 Tax=Enterobacteriaceae RepID=C9Y043_CROTZ Length = 99 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 67/74 (90%), Positives = 69/74 (93%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQ V+FDVHQGPKGNH Sbjct: 24 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNH 83 Query: 61 ASVIVPVEVEAAVA 74 ASVIVP+E E A A Sbjct: 84 ASVIVPLEAEVAPA 97 >UniRef50_Q7NT55 Cold shock transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NT55_CHRVO Length = 110 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 38/67 (56%), Positives = 49/67 (73%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN++KGFGFI P+ GG+D+FAH+S I G+R+L Q V FD+ +GPKG Sbjct: 44 MATGTVKWFNDSKGFGFITPDEGGDDVFAHFSQINAKGFRSLAENQRVSFDIVEGPKGKQ 103 Query: 61 ASVIVPV 67 AS I P+ Sbjct: 104 ASNIQPI 110 >UniRef50_Q0JY13 Cold shock protein, DNA-binding n=2 Tax=Burkholderiaceae RepID=Q0JY13_RALEH Length = 98 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 40/74 (54%), Positives = 54/74 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VKWFN+AKGFGFI P+ GG+D+FAH+S I+ DG+++L+ Q VQF+V GPKG Sbjct: 18 MQTGIVKWFNDAKGFGFIKPDAGGDDLFAHFSEIRADGFKSLQENQRVQFEVKNGPKGLQ 77 Query: 61 ASVIVPVEVEAAVA 74 A+ I P+ A A Sbjct: 78 AANITPLXALTAGA 91 >UniRef50_A4G7K9 Cold shock protein CspD n=3 Tax=Bacteria RepID=A4G7K9_HERAR Length = 67 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 42/65 (64%), Positives = 52/65 (80%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTVKWFN++KGFGFI P+ GGED+FAH+S I M+G++TLK GQ V F+V QGPKG Sbjct: 1 MQTGTVKWFNDSKGFGFITPDSGGEDLFAHFSAITMEGFKTLKEGQKVSFEVTQGPKGKQ 60 Query: 61 ASVIV 65 AS I Sbjct: 61 ASNIK 65 >UniRef50_P0A970 Cold shock-like protein cspD n=101 Tax=Gammaproteobacteria RepID=CSPD_ECO57 Length = 74 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 74/74 (100%), Positives = 74/74 (100%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH Sbjct: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 Query: 61 ASVIVPVEVEAAVA 74 ASVIVPVEVEAAVA Sbjct: 61 ASVIVPVEVEAAVA 74 >UniRef50_A2SIM9 Cold-shock DNA-binding protein family n=16 Tax=Proteobacteria RepID=A2SIM9_METPP Length = 89 Score = 101 bits (253), Expect = 7e-21, Method: Composition-based stats. Identities = 47/74 (63%), Positives = 54/74 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI PEGGGED+FAH+S I MDG+RTLK G V F++ GPKG Sbjct: 1 MVNGTVKWFNDAKGFGFIEPEGGGEDVFAHFSAILMDGFRTLKQGARVSFELVDGPKGKL 60 Query: 61 ASVIVPVEVEAAVA 74 A I P+E A A Sbjct: 61 AQNIAPLESRADPA 74 >UniRef50_D1IX09 Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IX09_VITVI Length = 236 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 GTVKWFN+ KGFGFI P+ GG+D+F H S+I+ +G+R+L G++V+F V G A Sbjct: 5 TGTVKWFNDQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLGEGEAVEFVVESSDDGRTKA 64 Query: 62 SVIVPVEVEA 71 + + Sbjct: 65 VDVTGPDGNP 74 >UniRef50_B5Y9M2 Conserved domain protein n=20 Tax=Bacteria RepID=B5Y9M2_COPPD Length = 89 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 44/66 (66%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWF+ KG+GFI + G D+F H+S I+ +G+++L G V+F++ GPKG Sbjct: 23 MYTGTVKWFDAKKGYGFITRDDGEGDVFVHFSAIEGNGFKSLDQGDKVEFEIVNGPKGPQ 82 Query: 61 ASVIVP 66 A+ +V Sbjct: 83 AAKVVK 88 >UniRef50_Q08VT0 Conserved domain protein n=3 Tax=Bacteria RepID=Q08VT0_STIAU Length = 100 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 41/67 (61%), Positives = 50/67 (74%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI +GGGED+F H++ I MDG+RTL+ GQ VQFDV +GPKG Sbjct: 34 MATGTVKWFNDAKGFGFITQDGGGEDVFCHHTAINMDGFRTLQEGQKVQFDVARGPKGLQ 93 Query: 61 ASVIVPV 67 A + Sbjct: 94 AQNVRAA 100 >UniRef50_O30875 Major cold shock protein n=98 Tax=cellular organisms RepID=CSPA_MICLC Length = 67 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 42/67 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KG+GFI PE D+F H+S IQ +G++ L+ V+F+ GPKG Sbjct: 1 MAVGTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKGLQ 60 Query: 61 ASVIVPV 67 A+ + + Sbjct: 61 AANVTKL 67 >UniRef50_A9IR63 Cold shock-like protein n=13 Tax=cellular organisms RepID=A9IR63_BORPD Length = 68 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 44/66 (66%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI P+ G +D+FAHYS I +GY++L+ Q V F+V QGPKG Sbjct: 1 MATGIVKWFNAEKGYGFITPDDGSKDLFAHYSEISSEGYKSLQENQRVTFEVGQGPKGPS 60 Query: 61 ASVIVP 66 A I Sbjct: 61 AKNIKV 66 >UniRef50_B3PL56 Cold-shock protein CspD n=34 Tax=Bacteria RepID=B3PL56_CELJU Length = 125 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 44/66 (66%), Positives = 51/66 (77%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFNNAKG+GFI + GGED+FAHYS I MDGY+TLKAGQ V F++ +G KG H Sbjct: 42 MPTGTVKWFNNAKGYGFILADEGGEDLFAHYSAISMDGYKTLKAGQQVSFEITRGDKGLH 101 Query: 61 ASVIVP 66 A IV Sbjct: 102 AINIVA 107 >UniRef50_Q4KEW6 Cold shock protein capa n=14 Tax=Bacteria RepID=Q4KEW6_PSEF5 Length = 91 Score = 99.5 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 34/65 (52%), Positives = 48/65 (73%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KGFGFI P+GGG+D+F H+ I+ DG+++LK GQ+V F +G KG A Sbjct: 26 QTGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQA 85 Query: 62 SVIVP 66 + + P Sbjct: 86 AQVRP 90 >UniRef50_A1JMC2 Cold shock-like protein cspD (Cold shock-like protein) n=19 Tax=Bacteria RepID=A1JMC2_YERE8 Length = 85 Score = 99.1 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 62/67 (92%), Positives = 64/67 (95%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQ V FDVHQGPKGNH Sbjct: 1 METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQMVNFDVHQGPKGNH 60 Query: 61 ASVIVPV 67 AS+IVP+ Sbjct: 61 ASLIVPL 67 >UniRef50_Q88P68 Cold-shock domain family protein n=52 Tax=Bacteria RepID=Q88P68_PSEPK Length = 165 Score = 98.7 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +KGTVKWFN+ KG+GFI PE G D+F H+ I+ +G+++LK GQ V F+ QG KG A Sbjct: 101 QKGTVKWFNDEKGYGFITPESG-PDLFVHFRAIEGNGFKSLKEGQQVTFEAVQGQKGMQA 159 Query: 62 SVIVPV 67 + PV Sbjct: 160 DKVQPV 165 >UniRef50_Q1DBV4 Cold-shock protein CspA n=10 Tax=cellular organisms RepID=Q1DBV4_MYXXD Length = 68 Score = 98.3 bits (244), Expect = 6e-20, Method: Composition-based stats. Identities = 37/67 (55%), Positives = 47/67 (70%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+AKGFGFI + GG D+F H++ IQ DG+RTL GQ V+F+ +GPKG Sbjct: 1 MATGTVKWFNDAKGFGFIAQDDGGADVFCHHTAIQTDGFRTLAEGQKVEFETRKGPKGLQ 60 Query: 61 ASVIVPV 67 A + V Sbjct: 61 AENVRVV 67 >UniRef50_B7C7U1 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7U1_9FIRM Length = 90 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KG+GFI E G +D+F HYS+I +G++TL+ GQ+V +DV + +G Sbjct: 21 MSTGKVKWFNAEKGYGFITSEDG-KDVFVHYSSINSEGFKTLEEGQTVTYDVVESDRGQQ 79 Query: 61 ASVIVPVEVEA 71 A+ + V+ A Sbjct: 80 ANNVTVVDTAA 90 >UniRef50_P0A974 Cold shock-like protein cspE n=233 Tax=Gammaproteobacteria RepID=CSPE_ECO57 Length = 69 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 47/65 (72%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VKWFN +KGFGFI PE G +D+F H+S IQ +G++TL GQ V+F++ G KG A+ Sbjct: 5 KGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAA 64 Query: 63 VIVPV 67 ++ + Sbjct: 65 NVIAL 69 >UniRef50_P58726 Cold shock-like protein cspJ n=322 Tax=cellular organisms RepID=CSPJ_SALTI Length = 70 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 42/65 (64%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN KGFGFI P+ G +D+F H+S IQ + +RTL Q V+F QGPKG A Sbjct: 6 TGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPKGPSAV 65 Query: 63 VIVPV 67 +V + Sbjct: 66 NVVAL 70 >UniRef50_C7Q9X4 Cold-shock DNA-binding domain protein n=31 Tax=Bacteria RepID=C7Q9X4_CATAD Length = 68 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 41/67 (61%), Positives = 46/67 (68%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI +GGG D+FAH+S I DGYR L+ GQ V F+V QG KG Sbjct: 1 MTDGTVKWFNAEKGFGFIEQDGGGADVFAHFSNIAADGYRELQEGQRVSFEVTQGQKGPQ 60 Query: 61 ASVIVPV 67 A IVP Sbjct: 61 AVNIVPA 67 >UniRef50_Q1LCU6 Cold-shock DNA-binding protein family n=7 Tax=Proteobacteria RepID=Q1LCU6_RALME Length = 126 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 51/67 (76%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN++KGFGFI P+ GG+D+FAH+S +Q +G+++L+ GQ V++ G KG Sbjct: 60 METGTVKWFNDSKGFGFITPDAGGDDLFAHFSEVQGNGFKSLQEGQKVRYVAGVGQKGPA 119 Query: 61 ASVIVPV 67 A+ I P+ Sbjct: 120 ATKIEPI 126 >UniRef50_B4S1R6 Stress response protein CspD n=5 Tax=cellular organisms RepID=B4S1R6_ALTMD Length = 72 Score = 96.0 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 50/64 (78%), Positives = 53/64 (82%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNNAKGFGFI PE GGEDIFAHYSTIQM+GYR+LKAGQ V F+V QGPKG H Sbjct: 1 MAVGKVKWFNNAKGFGFIVPEDGGEDIFAHYSTIQMEGYRSLKAGQEVTFEVQQGPKGLH 60 Query: 61 ASVI 64 A I Sbjct: 61 AENI 64 >UniRef50_Q816H3 Cold shock-like protein cspD n=370 Tax=Bacteria RepID=CSPD_BACCR Length = 66 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VKWFN+ KGFGFI E GG+D+F H+S IQ DG++TL+ GQ V F++ +G +G Sbjct: 1 MQTGKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRGPQ 59 Query: 61 ASVIVP 66 A+ + Sbjct: 60 AANVTK 65 >UniRef50_Q5HPE0 Cold shock protein cspA n=113 Tax=Bacteria RepID=CSPA_STAEQ Length = 66 Score = 95.3 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 49/67 (73%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M++GTVKWFN KGFGFI E G D+F H+S I +GY++L+ GQSV+F+V +G +G Sbjct: 1 MKQGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQEGYKSLEEGQSVEFEVVEGDRGPQ 59 Query: 61 ASVIVPV 67 A+ +V + Sbjct: 60 AANVVKL 66 >UniRef50_C4WXL4 ACYPI009849 protein n=3 Tax=cellular organisms RepID=C4WXL4_ACYPI Length = 250 Score = 95.3 bits (236), Expect = 6e-19, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 43/64 (67%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G KWFN+ KGFGF+ P+ GG+D+F H I+ DG+R+L+ + V+F H+ KG A Sbjct: 71 RQGICKWFNSKKGFGFVTPDDGGKDVFVHQRVIKKDGFRSLRENEHVEFTCHESDKGLEA 130 Query: 62 SVIV 65 +++ Sbjct: 131 TLVT 134 >UniRef50_P71478 Cold shock protein 1 n=20 Tax=Firmicutes RepID=CSP1_LACPL Length = 66 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTVKWFN KG+GFI E G D+F H+S IQ DG++TL+ GQ V FD +G Sbjct: 1 MKNGTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQ 59 Query: 61 ASVIVP 66 A+ +VP Sbjct: 60 AANVVP 65 >UniRef50_Q03A67 Cold-shock DNA-binding protein family n=16 Tax=Firmicutes RepID=Q03A67_LACC3 Length = 66 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN KG+GFI E G D+F H+S IQ DGY+TL+ GQ+V F+V +G Sbjct: 1 MEHGTVKWFNAEKGYGFITREDGS-DVFVHFSAIQGDGYKTLEEGQAVTFEVEDSDRGPQ 59 Query: 61 ASVI 64 A + Sbjct: 60 AVNV 63 >UniRef50_P0A356 Cold shock-like protein cspLA n=163 Tax=root RepID=CSPA_LISIN Length = 66 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME+GTVKWFN KGFGFI E G +D+F H+S IQ DG+++L GQ+V FDV +G +G Sbjct: 1 MEQGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQ 59 Query: 61 ASVIVPV 67 A+ + Sbjct: 60 AANVQKA 66 >UniRef50_A3BPB0 Putative uncharacterized protein n=4 Tax=Oryza sativa RepID=A3BPB0_ORYSJ Length = 238 Score = 94.5 bits (234), Expect = 9e-19, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 KGTVKWF+ KGFGFI P+ GGED+F H S+++ DGYR+L G V+F V G G A Sbjct: 7 KGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGNDGRTKA 66 Query: 62 SVIVPVEVEA 71 + A Sbjct: 67 VNVTAPGGRA 76 >UniRef50_A4VNB0 Cold-shock DNA-binding protein n=75 Tax=Bacteria RepID=A4VNB0_PSEU5 Length = 243 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 1/68 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKWFN +KGFGFI + G +D+F H+ I+ +G+R L GQ V+F + KG A Sbjct: 177 GTVKWFNTSKGFGFISRDSG-DDVFVHFRAIRGEGHRILVEGQRVEFTIMMRDKGLQAED 235 Query: 64 IVPVEVEA 71 +VPVE Sbjct: 236 VVPVEAGR 243 >UniRef50_Q2LQ45 Cold shock protein n=49 Tax=Bacteria RepID=Q2LQ45_SYNAS Length = 90 Score = 94.5 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFN KGFGFI + GG D+F HYS IQ G++TL GQ V F+V G KG Sbjct: 25 MPEGKVKWFNEQKGFGFIEKDEGG-DVFVHYSAIQSSGFKTLYEGQRVSFEVQTGQKGPA 83 Query: 61 ASVIVPV 67 A + P+ Sbjct: 84 AVNVKPI 90 >UniRef50_A4VLV8 Cold-shock protein CspD n=5 Tax=Gammaproteobacteria RepID=A4VLV8_PSEU5 Length = 93 Score = 93.7 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 46/66 (69%), Positives = 54/66 (81%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNNAKG+GFI +GG ED+FAHYS IQM+GYRTLKAGQ+V F++ QGPKG H Sbjct: 7 MLSGKVKWFNNAKGYGFIVADGGDEDLFAHYSAIQMEGYRTLKAGQAVMFNILQGPKGLH 66 Query: 61 ASVIVP 66 A+ I P Sbjct: 67 ATDIRP 72 >UniRef50_P0A9Y8 Cold shock-like protein cspC n=125 Tax=Enterobacteriaceae RepID=CSPC_ECO57 Length = 69 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 45/65 (69%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG VKWFN +KGFGFI P G +D+F H+S IQ +G++TL GQ+V+F++ G KG A Sbjct: 5 KGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAV 64 Query: 63 VIVPV 67 + + Sbjct: 65 NVTAI 69 >UniRef50_P36995 Cold shock-like protein cspB n=24 Tax=Bacteria RepID=CSPB_ECOLI Length = 71 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 41/66 (62%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN KGFGFI P G +D+F H+S IQ D YRTL GQ V F + G KG A+ Sbjct: 6 TGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAA 65 Query: 63 VIVPVE 68 ++ + Sbjct: 66 NVIITD 71 >UniRef50_P27484 Glycine-rich protein 2 n=5 Tax=Viridiplantae RepID=GRP2_NICSY Length = 214 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-H 60 KGTVKWF++ KGFGFI P+ GGED+F H S I+ +G+R+L G++V+F+V G G Sbjct: 9 AKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGRTK 68 Query: 61 ASVIVPVEVEA 71 A + + A Sbjct: 69 AVDVTGPDGAA 79 >UniRef50_A1U1H2 Cold-shock DNA-binding protein family n=5 Tax=Gammaproteobacteria RepID=A1U1H2_MARAV Length = 103 Score = 92.9 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 44/74 (59%), Positives = 55/74 (74%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFNNAKG+GFI +G +D+FAH+S++QMDGY+TLKAGQ+V FD KG H Sbjct: 1 MPRGKVKWFNNAKGYGFIIEDGCSDDLFAHFSSVQMDGYKTLKAGQTVTFDKKPSDKGVH 60 Query: 61 ASVIVPVEVEAAVA 74 A IVP EV A + Sbjct: 61 AINIVPDEVPARES 74 >UniRef50_C6VN45 Cold shock protein CspC n=8 Tax=Firmicutes RepID=C6VN45_LACPJ Length = 66 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWFN KGFGFI E G D+F H+S IQ DG+++L GQ+V FDV + +G Sbjct: 1 MEHGTVKWFNADKGFGFITRENGS-DVFVHFSAIQEDGFKSLDEGQAVNFDVEESDRGPQ 59 Query: 61 ASVIVPV 67 A + Sbjct: 60 AVNVTKA 66 >UniRef50_P0A363 Cold shock-like protein cspB n=58 Tax=Enterobacteriaceae RepID=CSPB_YEREN Length = 70 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 43/65 (66%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+ KGFGFI P G +D+F H+S IQ + Y+TL GQ+V+F + QG KG A Sbjct: 6 TGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQKGPSAV 65 Query: 63 VIVPV 67 +V + Sbjct: 66 NVVAL 70 >UniRef50_A3Y9L0 Cold-shock DNA-binding domain protein n=2 Tax=Marinomonas RepID=A3Y9L0_9GAMM Length = 97 Score = 92.9 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 + G VKWFN+ KGFGFI E GG D+F H+ I G RTL+ GQ V F+V QG KG Sbjct: 32 LVSGIVKWFNDEKGFGFIERE-GGPDVFVHFRAINGTGRRTLQEGQKVTFEVTQGQKGPQ 90 Query: 61 ASVIVPV 67 A + V Sbjct: 91 AENVSIV 97 >UniRef50_B5HGK4 Cold shock protein n=10 Tax=Streptomyces RepID=B5HGK4_STRPR Length = 67 Score = 92.6 bits (229), Expect = 4e-18, Method: Composition-based stats. Identities = 39/67 (58%), Positives = 43/67 (64%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFN KGFGFI +GGG D+FAHYS I G+R L GQ V FD+ QG KG Sbjct: 1 MASGVVKWFNAEKGFGFIEQDGGGPDVFAHYSNIAAQGFRELLEGQKVNFDIAQGQKGPT 60 Query: 61 ASVIVPV 67 A IVP Sbjct: 61 AENIVPA 67 >UniRef50_B4RGZ9 Cold-shock DNA-binding domain protein n=75 Tax=Bacteria RepID=B4RGZ9_PHEZH Length = 250 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M GTVKWFN AKGFGFI P+ GG+D+F H S + G L G V++++ Q + G Sbjct: 56 MASGTVKWFNTAKGFGFIQPDDGGQDVFVHISAVAQAGLDALNEGDQVEYELEQDRRSGK 115 Query: 60 HASVIVPVEVEAAVA 74 A+ + V + A A Sbjct: 116 LAATSIVVTAQGAPA 130 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GNHA 61 G VKWFN KGFGFI PEGGG+DIF H S ++ G L GQ+V FD+ Q + G + Sbjct: 183 SGVVKWFNPTKGFGFIKPEGGGQDIFVHISAVEQAGLSGLNEGQTVDFDLEQDRRSGKTS 242 Query: 62 SVIVPVEV 69 + + + Sbjct: 243 ATNLKITG 250 >UniRef50_P54584 Cold shock protein n=9 Tax=Bacteria RepID=CSP_ARTGO Length = 67 Score = 92.2 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 43/67 (64%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTVKWFN KGFGFI P+ D+F HYS IQ G++TL VQF++ QG KG Sbjct: 1 MAQGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKGPQ 60 Query: 61 ASVIVPV 67 A+ + V Sbjct: 61 ATGVTLV 67 >UniRef50_A3XD40 Cold shock family protein n=5 Tax=Rhodobacteraceae RepID=A3XD40_9RHOB Length = 120 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 31/67 (46%), Positives = 41/67 (61%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+GG +D+F H S ++ G L Q V FD+ G G Sbjct: 53 MATGTVKWFNSTKGFGFIAPDGGTKDVFVHISAVERSGLTGLADNQKVTFDIEPGRDGRE 112 Query: 61 ASVIVPV 67 A+V + + Sbjct: 113 AAVNLAL 119 >UniRef50_Q01761 Cold shock-like protein 7.0 n=356 Tax=cellular organisms RepID=CSP7_STRCL Length = 66 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KGFGFI +GGG D+F HYS I G+R+L+ Q V FDV G G Sbjct: 1 MATGTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE-GPQ 59 Query: 61 ASVIVPV 67 A + P Sbjct: 60 AENVSPA 66 >UniRef50_A5BWB0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BWB0_VITVI Length = 189 Score = 91.8 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 GTVKWF+ KGFGFI P+ GGED+F H ++I+ DG+RTL G++V+F V G G A Sbjct: 8 TGTVKWFSGQKGFGFIAPDDGGEDLFVHQTSIRSDGFRTLSEGETVEFAVDHGEDGRTKA 67 Query: 62 SVIVPVEVE 70 + V Sbjct: 68 VEVTAVRGS 76 >UniRef50_A1S709 Cold-shock DNA-binding protein family n=6 Tax=cellular organisms RepID=A1S709_SHEAM Length = 70 Score = 91.8 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKWFN+ KGFGF+ + D+F HY I G RTLK GQ V F + +G KG A+ Sbjct: 7 TGTVKWFNDEKGFGFLSRDNDS-DVFVHYRAINTQGRRTLKEGQKVSFSLVEGQKGLLAA 65 Query: 63 VIVPV 67 + P+ Sbjct: 66 NVTPL 70 >UniRef50_Q47TE2 Cold-shock DNA-binding protein family n=9 Tax=Actinobacteria (class) RepID=Q47TE2_THEFY Length = 127 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKW++ KGFGF+ + GGE +F H S + G TL+ GQ V+F + +G KG Sbjct: 1 MPTGKVKWYDAGKGFGFLTKDDGGE-VFLHASALP-PGTTTLRPGQRVEFGIVEGRKGTQ 58 Query: 61 ASVIVPVEVEAAVA 74 A + ++ +VA Sbjct: 59 ALQVRLLDTPPSVA 72 >UniRef50_UPI000194E5B1 PREDICTED: Rous sarcoma virus transcription enhancer factor II n=1 Tax=Taeniopygia guttata RepID=UPI000194E5B1 Length = 420 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 213 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 272 Query: 60 HASVIVPVEVEAAV 73 A+ + + Sbjct: 273 EAANVTGPDGVPVE 286 >UniRef50_P62171 Cold shock-like protein cspC n=85 Tax=Bacteria RepID=CSPC_BACCR Length = 65 Score = 90.6 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWFN KGFGFI E G +D+F H+S IQ DGY++L+ GQ V+FD+ G +G A+ Sbjct: 2 QGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQAA 60 Query: 63 VIVPV 67 +V + Sbjct: 61 NVVKL 65 >UniRef50_Q81DK5 Cold shock-like protein cspE n=713 Tax=Bacteria RepID=CSPE_BACCR Length = 67 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWFN+ KGFGFI G D+F H+S I DG+++L GQ V F+V +G +G A Sbjct: 4 TGKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAK 62 Query: 63 VIVPV 67 +V + Sbjct: 63 NVVKL 67 >UniRef50_Q2LY24 Cold shock protein n=11 Tax=Bacteria RepID=Q2LY24_SYNAS Length = 132 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTVKWFN +KGFGFI + G D+F H+S I+M+GY+ L+ G V+FDV +G KG Sbjct: 67 MSEGTVKWFNASKGFGFIAQDNGN-DVFVHFSAIKMEGYKALEEGARVRFDVVKGNKGPA 125 Query: 61 ASVIVPV 67 A + + Sbjct: 126 ADNVELL 132 >UniRef50_Q1J0P4 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=Q1J0P4_DEIGD Length = 87 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 3/76 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KG 58 M G VKWFN KG+GFI E G ED+FAH+S IQ G++ L G V+F++ G KG Sbjct: 1 MAVGKVKWFNAEKGYGFIETE-GSEDVFAHFSAIQAQGFKKLNEGDEVEFEIEPGQRGKG 59 Query: 59 NHASVIVPVEVEAAVA 74 A IV + A A Sbjct: 60 PQARNIVVTKAAPAPA 75 >UniRef50_O67327 Cold shock-like protein n=2 Tax=Bacteria RepID=CSP_AQUAE Length = 70 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 44/65 (67%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWF+ KG+GFI E D+F H++ IQM+G++TL+ GQ V+FDV + KG A Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKGPRAK 63 Query: 63 VIVPV 67 + + Sbjct: 64 NVRVL 68 >UniRef50_C0QFU1 CspA n=4 Tax=cellular organisms RepID=C0QFU1_DESAH Length = 66 Score = 90.2 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN++KGFGFI E G ED+F H+S I G+++L G V FD+ QG KG Sbjct: 1 MANGTVKWFNDSKGFGFIEQENG-EDVFVHHSGINASGFKSLNEGDKVTFDIEQGQKGPA 59 Query: 61 ASVIVPV 67 A+ + V Sbjct: 60 ATNVTVV 66 >UniRef50_C4Z3Q0 Cold shock protein (Beta-ribbon, CspA family) n=10 Tax=Bacteria RepID=C4Z3Q0_EUBE2 Length = 84 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWFNN KG+GFI + G+D+F HYS + M+G+++L+ G V+FDV +G KG A+ Sbjct: 21 KGTVKWFNNQKGYGFI-SDESGKDVFVHYSGLNMEGFKSLEEGAQVEFDVTEGAKGPQAT 79 Query: 63 VIVPV 67 + + Sbjct: 80 NVTKL 84 >UniRef50_Q3AFQ5 Cold shock protein CspC n=14 Tax=Bacteria RepID=Q3AFQ5_CARHZ Length = 65 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF+ AKG+GFI E GG D+F H+S I+ +G++TL+ GQ V+F++ +G +G A+ Sbjct: 2 QGKVKWFDPAKGYGFIEREDGG-DVFVHFSAIKGNGFKTLEEGQRVEFNIVEGTRGPQAA 60 Query: 63 VIVPV 67 +V + Sbjct: 61 DVVKL 65 >UniRef50_A5VRM7 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRM7_BRUO2 Length = 105 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/57 (50%), Positives = 36/57 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 M GTVKWFN KGFGFI P+ GG D+F H S +Q G TL GQ V +++ Q + Sbjct: 42 MATGTVKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRR 98 >UniRef50_B0S1I2 Cold shock protein n=4 Tax=cellular organisms RepID=B0S1I2_FINM2 Length = 67 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 2/68 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVHQGPKGN 59 M KG VKWFN KGFGFI E G D+F HY+ I+ +G YR L+ Q V+F++ +GPKG Sbjct: 1 MTKGKVKWFNATKGFGFISTEDQG-DVFVHYTAIEDNGEYRKLEENQEVEFEISEGPKGL 59 Query: 60 HASVIVPV 67 A + + Sbjct: 60 QACNVKKL 67 >UniRef50_B7PM92 PIN domain-containing RNA-binding protein, putative n=2 Tax=Ixodes scapularis RepID=B7PM92_IXOSC Length = 315 Score = 89.9 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI EDIF H + I + R++ G++V+FDV G KG Sbjct: 19 GTVKWFNVKNGYGFINRNDTREDIFVHQTAITRNNPQKIMRSVGEGETVEFDVVVGEKGR 78 Query: 60 HASVIVPVEVEA 71 A+ + + E Sbjct: 79 EAANVTGPDGEP 90 >UniRef50_Q4ZRK5 Cold-shock protein, DNA-binding n=10 Tax=Pseudomonas RepID=Q4ZRK5_PSEU2 Length = 92 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 42/65 (64%), Positives = 49/65 (75%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEG-GGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M +G VKWFNNAKGFGFI EG ED+F H+S I+MDGY+TLKAGQ V+F+V GPKG Sbjct: 1 MIEGKVKWFNNAKGFGFINAEGKSDEDLFVHFSAIEMDGYKTLKAGQKVRFEVAHGPKGL 60 Query: 60 HASVI 64 A I Sbjct: 61 QAIKI 65 >UniRef50_Q2S0T4 Conserved domain protein n=2 Tax=Bacteria RepID=Q2S0T4_SALRD Length = 110 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQ-MDGYRTLKAGQSVQFDVHQGPKGN 59 M TVKWF+ KG+GFI GED+F HYS IQ D ++TLK+ Q V+F+++ GPKG Sbjct: 1 MRTSTVKWFDAKKGYGFIHHPDDGEDVFVHYSNIQSDDDFKTLKSDQHVRFEMNDGPKGL 60 Query: 60 HASVIVPVEVEAAVA 74 HA + P++ E A + Sbjct: 61 HALEVAPLDDEEAPS 75 >UniRef50_C8P136 Conserved domain protein n=6 Tax=Bacteria RepID=C8P136_ERYRH Length = 66 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VK+FN KG+GFI E GG+DIF HYS I DGY+TL+ GQ V F+V +GP+G Sbjct: 1 MSTGKVKFFNAEKGYGFITIE-GGQDIFVHYSAIVADGYKTLEEGQEVSFEVVEGPRGEQ 59 Query: 61 ASVIVPV 67 A+ + + Sbjct: 60 AANVRGI 66 >UniRef50_A8I8L3 Cold-shock DNA-binding domain n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I8L3_AZOC5 Length = 117 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK--G 58 M GTVKWFN KGFGFI P+ GG D F H S ++ G L+ GQ V +D+ + Sbjct: 48 MTTGTVKWFNPEKGFGFIAPDDGGADAFVHISAVERAGLPPLREGQKVNYDLVADKRSGK 107 Query: 59 NHASVIVPV 67 + AS + V Sbjct: 108 SSASNLTLV 116 >UniRef50_D1C6U7 Cold-shock DNA-binding domain protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6U7_SPHTD Length = 77 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKW++ KG+GFI + G D+F H S I L G V+FDV PKG Sbjct: 1 MTTGTVKWYDPEKGYGFIARDDGDSDLFVHRSAISG---SELNEGDRVEFDVTSSPKGPR 57 Query: 61 ASVIVPVEV 69 A + E Sbjct: 58 AEHVRVTEP 66 >UniRef50_A8QHS7 'Cold-shock' DNA-binding domain containing protein n=4 Tax=cellular organisms RepID=A8QHS7_BRUMA Length = 290 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI G+DIF H + + + R+L G+ V+FDV +G KG Sbjct: 59 QGTVKWFNVKNGYGFINRADTGDDIFVHQTAVTKNNPNKYLRSLGDGEKVEFDVVEGQKG 118 Query: 59 NHASVIVPVEVE 70 A+ + Sbjct: 119 PEAANVTGPNGS 130 >UniRef50_P16989 DNA-binding protein A n=144 Tax=cellular organisms RepID=DBPA_HUMAN Length = 372 Score = 88.7 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 93 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 152 Query: 60 HASVIVPVEVEAAV 73 A+ + + Sbjct: 153 EAANVTGPDGVPVE 166 >UniRef50_Q4FT63 Cold-shock DNA-binding protein family n=10 Tax=cellular organisms RepID=Q4FT63_PSYA2 Length = 71 Score = 88.3 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWFN++KGFGFI + G EDIF H+ IQ DGYR+LK G+ V+F V +G KG A Sbjct: 5 EQGIVKWFNDSKGFGFIQRDSG-EDIFVHFRAIQGDGYRSLKDGEKVEFSVVEGDKGLQA 63 Query: 62 SVIVPVEV 69 + VE Sbjct: 64 EEVRRVEE 71 >UniRef50_A1U3R2 Cold-shock DNA-binding protein family n=3 Tax=Marinobacter RepID=A1U3R2_MARAV Length = 179 Score = 88.3 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+GTVKWFN KGFGFI + G E IF H+ I+ G R L+ GQ V+F+V + KG A Sbjct: 113 EEGTVKWFNVKKGFGFIVRDSGDE-IFVHFRAIRGRGRRVLRQGQLVRFNVVEADKGLQA 171 Query: 62 SVIVPV 67 + + Sbjct: 172 DNVSIL 177 >UniRef50_C5RTX4 Cold-shock DNA-binding domain protein n=13 Tax=cellular organisms RepID=C5RTX4_9THEO Length = 67 Score = 88.3 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G VKWFN KG+GFI E G D+F HYS I+ DG++TL+ GQ V+F+V + KG Sbjct: 1 MVRGKVKWFNAEKGYGFIEREDG-TDVFVHYSAIEGDGFKTLEEGQKVEFEVVEATKGPQ 59 Query: 61 ASVIVPV 67 AS + V Sbjct: 60 ASKVRKV 66 >UniRef50_Q90650 Rous sarcoma virus transcription enhancer factor II n=2 Tax=Tetrapoda RepID=Q90650_CHICK Length = 298 Score = 87.9 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYR----TLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R ++ G++V+FDV +G KG Sbjct: 90 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEGEKGA 149 Query: 60 HASVIVPVEVEAAV 73 A+ + + Sbjct: 150 EAANVTGPDGVPVE 163 >UniRef50_A5N624 CspA n=10 Tax=cellular organisms RepID=A5N624_CLOK5 Length = 67 Score = 87.9 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 2/68 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYR-TLKAGQSVQFDVHQGPKGN 59 M+ GTVKWFN+ KGFGFI G D+F H++ IQ + R L+ GQ VQFDV +GPKG Sbjct: 1 MKTGTVKWFNSEKGFGFIEVP-GENDVFVHFTAIQSNEARKNLEEGQKVQFDVEEGPKGL 59 Query: 60 HASVIVPV 67 A+ +V + Sbjct: 60 QAANVVKL 67 >UniRef50_C4WSK9 ACYPI003867 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSK9_ACYPI Length = 305 Score = 87.9 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 G VKWFN G+GFI EDIF H S I + R++ G++V+FDV +G KG Sbjct: 29 TGVVKWFNVKSGYGFINRNDTKEDIFVHQSAIIKNNPKKIVRSVGDGETVEFDVVEGEKG 88 Query: 59 NHASVIVPVEVEA 71 + A+ + + EA Sbjct: 89 HEAANVTGPDGEA 101 >UniRef50_O54310 Cold shock-like protein n=7 Tax=Bacteria RepID=CSP_THEMA Length = 66 Score = 87.9 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 1/66 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF++ KG+GFI + GG D+F H+S I+M+G++TLK GQ V+F++ +G KG A+ Sbjct: 2 RGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQAA 60 Query: 63 VIVPVE 68 + VE Sbjct: 61 HVKVVE 66 >UniRef50_D0LU49 Cold-shock DNA-binding domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LU49_HALO1 Length = 94 Score = 87.9 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VKWFNN KG+GFI E G +D+F H+S I DGYR L G+ V++++ +GPKG Sbjct: 1 MPTGAVKWFNNVKGYGFILREDG-QDVFVHWSNILADGYRLLTEGEIVEYELQEGPKGLF 59 Query: 61 ASVIVPVEVEA 71 A+ + + + Sbjct: 60 AAQVKSRDPSS 70 >UniRef50_D1H869 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H869_VITVI Length = 208 Score = 87.9 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 G V+WF++ KGFGFI P GGED+F H S+I+ DG+R+L G++V+F + G G A Sbjct: 7 TGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRTKA 66 Query: 62 SVIVPVEVEA 71 + + + Sbjct: 67 VDVTGPDGSS 76 >UniRef50_P41824 Y-box factor homolog n=1 Tax=Aplysia californica RepID=YBOXH_APLCA Length = 253 Score = 87.9 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 GTVKWFN G+GFI + ED+F H + I + R++ G+ V+FDV +G KG Sbjct: 34 SGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKG 93 Query: 59 NHASVIVPVEVE 70 N A+ + E Sbjct: 94 NEAANVTGPEGS 105 >UniRef50_A4VMZ2 Cold shock protein CspA n=2 Tax=Gammaproteobacteria RepID=A4VMZ2_PSEU5 Length = 136 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWFN+AKG+GFI G G D+F HY I+ DG+R+L GQ V+F V QG KG A Sbjct: 72 ETGTVKWFNDAKGYGFIQR-GNGADVFVHYRAIRGDGHRSLAEGQQVEFSVIQGQKGLQA 130 Query: 62 SVIVPV 67 + + Sbjct: 131 EDVAGL 136 >UniRef50_UPI000155BE86 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BE86 Length = 223 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 62 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGA 121 Query: 60 HASVIVPVEVEAAV 73 A+ + + Sbjct: 122 EAANVTGPDGVPVE 135 >UniRef50_Q9VRN5 Protein lin-28 homolog n=1 Tax=Drosophila melanogaster RepID=LIN28_DROME Length = 195 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 40/61 (65%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G KWFN AKG+GF+ P GG+++F H S IQM G+R+L + V+F+ + +G A+ Sbjct: 41 GKCKWFNVAKGWGFLTPNDGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATR 100 Query: 64 I 64 + Sbjct: 101 V 101 >UniRef50_D0MDE8 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDE8_RHOM4 Length = 95 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYS-TIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +G VKWF+ KG+GFI GG DIF HYS I ++TL+ GQ V+F++H+GPKG H Sbjct: 4 RRGVVKWFDAKKGYGFIIHPEGGADIFVHYSQIISERRFKTLRTGQIVEFELHEGPKGLH 63 Query: 61 ASVIVPVEV 69 A +VP++ Sbjct: 64 ARNVVPLDE 72 >UniRef50_C9KNJ1 Conserved domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNJ1_9FIRM Length = 66 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KG+GFI E GG+D+F H+S IQ +G++TL GQ V+F++ +G +G A+ Sbjct: 3 GKVKWFSPEKGYGFIARE-GGDDVFVHFSAIQDEGFKTLNEGQDVEFEIVEGARGPQAAN 61 Query: 64 IVP 66 ++ Sbjct: 62 VIK 64 >UniRef50_Q3IC55 Cold shock protein n=52 Tax=Bacteria RepID=Q3IC55_PSEHT Length = 68 Score = 87.2 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G+VKWFN AKGFGFI E G D+FAH+S I DG++TL GQ VQF V QG KG A Sbjct: 5 TGSVKWFNEAKGFGFIEQESG-PDVFAHFSAITSDGFKTLAEGQRVQFTVTQGQKGPQAE 63 Query: 63 VIVPV 67 IV + Sbjct: 64 NIVCI 68 >UniRef50_C1F531 Cold shock protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F531_ACIC5 Length = 87 Score = 87.2 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E G VKWFN AKG+GFI GED+F H+S IQ GY+TL G++V+F+ QGPKG +A Sbjct: 22 ENGVVKWFNGAKGYGFIQR-STGEDVFVHFSAIQDSGYKTLNEGEAVEFECQQGPKGLNA 80 Query: 62 SVIVP 66 + +V Sbjct: 81 ANVVR 85 >UniRef50_C4FWF1 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWF1_9FIRM Length = 90 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FN KGFGFI + G D+F H+S IQ DG++TL GQ+V +DV + +G Sbjct: 25 MLNGTVKFFNVDKGFGFIAGQDG-VDVFVHFSNIQADGFKTLNEGQTVSYDVQETSRGLQ 83 Query: 61 ASVIVPV 67 A +V + Sbjct: 84 AINVVAI 90 >UniRef50_Q5CVY2 Cold shock RNA binding domain of the OB fold (Fragment) n=2 Tax=Cryptosporidium RepID=Q5CVY2_CRYPV Length = 135 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 42/71 (59%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G KWF++ KGFGFI P+ G EDIF H I+++G+R+L + V++++ KG + Sbjct: 12 SGVCKWFDSTKGFGFITPDDGSEDIFVHQQNIKVEGFRSLAQDERVEYEIETDDKGRRKA 71 Query: 63 VIVPVEVEAAV 73 V V A V Sbjct: 72 VNVSGPNGAPV 82 >UniRef50_A4XHY2 Cold-shock DNA-binding protein family n=3 Tax=cellular organisms RepID=A4XHY2_CALS8 Length = 66 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWFN KG+GFI E G +D+F H+S I M+GY+TL GQ V+FDV + +GN A Sbjct: 2 RGRVKWFNPEKGYGFISTENG-DDVFVHFSAINMEGYKTLAEGQMVEFDVVKSERGNQAV 60 Query: 63 VIVPV 67 + V Sbjct: 61 NVRKV 65 >UniRef50_B1MZK9 Cold shock protein n=15 Tax=Bacteria RepID=B1MZK9_LEUCK Length = 74 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 46/73 (63%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VK + +G+G+I P+ GGED+F H++ I M G++ LK G+ V + + QG K Sbjct: 1 MKTGIVKIWQKERGYGYITPDAGGEDVFVHFNGIDMPGFKALKQGEKVSYVLVQGYKAPQ 60 Query: 61 ASVIVPVEVEAAV 73 A+ + P+ +A+ Sbjct: 61 AAQVQPIMKKASE 73 >UniRef50_B4U902 Cold-shock DNA-binding domain protein n=9 Tax=Bacteria RepID=B4U902_HYDS0 Length = 71 Score = 86.4 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQ--MDGYRTLKAGQSVQFDVHQGPKGNH 60 GTVKWF+ KG+GF+ + D+F H+S I G++TL GQ V+F+V Q KG Sbjct: 4 TGTVKWFSKEKGYGFLTRDDNQGDVFVHFSAIDPNRQGFKTLVQGQRVEFEVDQDSKGPR 63 Query: 61 ASVIVPV 67 A + + Sbjct: 64 AKNVRVL 70 >UniRef50_P55390 Probable cold shock protein y4cH n=110 Tax=Proteobacteria RepID=Y4CH_RHISN Length = 69 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M GTVKWFN KGFGFI P+ G D+F H S ++ G R LK GQ + +++ + K G Sbjct: 2 MATGTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRKSGK 61 Query: 60 HASVI 64 ++ Sbjct: 62 MSADN 66 >UniRef50_B0KQL2 Cold-shock DNA-binding domain protein n=2 Tax=Gammaproteobacteria RepID=B0KQL2_PSEPG Length = 70 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KG+GFI PE G D+F H+ I+ +G+++LK GQ V F QG KG A Sbjct: 5 QNGTVKWFNDEKGYGFITPESG-ADLFVHFRAIEGNGFKSLKEGQKVTFVAVQGQKGLQA 63 Query: 62 SVIVPV 67 + V Sbjct: 64 DQVQVV 69 >UniRef50_B8C1C4 Cold-shock DNA-binding domain-containing protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1C4_THAPS Length = 136 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 KGTVKWF+ KGFGF+ P+ G ++F H+S I +G+R+L G+ V+F+V Q P G A Sbjct: 43 KGTVKWFDAKKGFGFLVPDDGSAEVFVHHSAIHANGFRSLGDGEVVEFEVMQEPNGKWKA 102 Query: 62 SVIVPVEVE 70 + + Sbjct: 103 LNVTGPDGS 111 >UniRef50_O65639 Glycine-rich protein n=10 Tax=cellular organisms RepID=O65639_ARATH Length = 299 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 G V WFN +KG+GFI P+ G ++F H S+I +GYR+L G +V+F + QG G A Sbjct: 12 TGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKTKA 71 Query: 62 SVIVPVEVEA 71 + + Sbjct: 72 VNVTAPGGGS 81 >UniRef50_A3YG84 Cold-shock protein CspD n=2 Tax=Marinomonas RepID=A3YG84_9GAMM Length = 92 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 41/66 (62%), Positives = 48/66 (72%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFNNAKG+GFI E ED+F HYS+I +DGY+TLKAGQSV F G +G H Sbjct: 1 MHHGTVKWFNNAKGYGFIVSESFEEDLFIHYSSILIDGYKTLKAGQSVSFKTSPGKQGLH 60 Query: 61 ASVIVP 66 A I+P Sbjct: 61 AVDIMP 66 >UniRef50_Q9Y2T7 Y-box-binding protein 2 n=21 Tax=Tetrapoda RepID=YBOX2_HUMAN Length = 364 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++V+FDV +G KG Sbjct: 96 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGA 155 Query: 60 HASVIV 65 A+ + Sbjct: 156 EATNVT 161 >UniRef50_Q9AN51 Blr1947 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q9AN51_BRAJA Length = 120 Score = 85.6 bits (211), Expect = 4e-16, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 39/64 (60%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKWFN KG+GF+ P+ GG+D+F H S ++ GY +L G V +++ G A+ Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGKDVFVHISAVEKAGYTSLVEGAKVGYELVTNRSGKQAAE 115 Query: 64 IVPV 67 + + Sbjct: 116 NLRL 119 >UniRef50_B3RZU4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RZU4_TRIAD Length = 279 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 G VKWFN +G+GFI + GED+F H + IQ + R++ + V+FDV GPKG Sbjct: 30 SGKVKWFNVKRGYGFIHRDDTGEDVFVHQTAIQANNPKKYLRSVGDEEVVEFDVLSGPKG 89 Query: 59 NHASVIVPVEVEA 71 A+ + A Sbjct: 90 LEAANVTGPNGTA 102 >UniRef50_B5A4M3 Glycine-rich nucleic acid binding protein n=1 Tax=Gymnochlora stellata RepID=B5A4M3_GYMST Length = 290 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-H 60 + GT KWFN KG+GFI P+ G +DIF H + I+ G+R+L G+ V+FDV G Sbjct: 24 QSGTCKWFNTVKGYGFILPQEGKDDIFVHQTAIKAVGFRSLAEGEQVEFDVEVDATGRKK 83 Query: 61 ASVIV 65 A + Sbjct: 84 ARNVT 88 >UniRef50_Q90WH1 Cold-shock domain protein (Fragment) n=4 Tax=Percomorpha RepID=Q90WH1_ORYLA Length = 366 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 4 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKG 63 Query: 59 NHASVIV 65 + A+ + Sbjct: 64 SEAANVT 70 >UniRef50_P95459 Major cold shock protein cspA n=33 Tax=cellular organisms RepID=CSPA_PSEAE Length = 69 Score = 85.6 bits (211), Expect = 5e-16, Method: Composition-based stats. Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+AKGFGFI PE G D+F H+ +IQ G+++L+ GQ V F V G KG A Sbjct: 5 QNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQKGLQA 63 Query: 62 SVIVPV 67 + V Sbjct: 64 DEVQVV 69 >UniRef50_Q30QF0 Cold-shock DNA-binding protein family n=12 Tax=Proteobacteria RepID=Q30QF0_SULDN Length = 72 Score = 85.2 bits (210), Expect = 6e-16, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQ--MDGYRTLKAGQSVQFDVHQGPKGNHA 61 G+VKWFN KG+GFI E GG+D+F H+ + G +L GQ V F++ +G KG A Sbjct: 7 GSVKWFNEEKGYGFIQQENGGKDVFVHFRQVNRTGPGRVSLSEGQKVTFELGEGQKGPQA 66 Query: 62 SVIVPV 67 + P+ Sbjct: 67 ENVTPL 72 >UniRef50_A4RZ32 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZ32_OSTLU Length = 106 Score = 85.2 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 38/70 (54%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G VKWFN KGFGFI P G E+IF H + I G+R++ G+ V++DV A Sbjct: 5 ARGKVKWFNATKGFGFIIPHDGSEEIFVHQTGISCAGFRSVWEGEEVEYDVDDTDFAPKA 64 Query: 62 SVIVPVEVEA 71 + + A Sbjct: 65 VNVTGPDGVA 74 >UniRef50_Q1RLA8 Zinc finger protein n=1 Tax=Ciona intestinalis RepID=Q1RLA8_CIOIN Length = 193 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%) Query: 4 GTVKWFNNAKGFGFICPEGGGE---DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 G KWFN+ +G+GFI P+ + D+F H S+I M+G+R+L+ G V+F KG Sbjct: 29 GNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSIDMEGFRSLQEGDRVKFWYKPSKKGLE 88 Query: 61 ASVIVPVEVE 70 A +V E Sbjct: 89 AVKVVGPGGE 98 >UniRef50_B5AU39 Y-box protein Lyb1 n=1 Tax=Lethenteron japonicum RepID=B5AU39_LAMJA Length = 331 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV +G KG Sbjct: 27 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVEGEKGA 86 Query: 60 HASVIVPVEVEA 71 A+ + A Sbjct: 87 EAANVTGPGGTA 98 >UniRef50_O46173 Y-box protein n=14 Tax=cellular organisms RepID=O46173_DROME Length = 359 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG---YRTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KGN Sbjct: 64 TGTVKWFNVKSGYGFINRNDTREDVFVHQSAIANNPKKAVRSVGDGEVVEFDVVIGEKGN 123 Query: 60 HASVIVPVEVEA 71 A+ + E Sbjct: 124 EAANVTGPSGEP 135 >UniRef50_A4A3Y7 Cold-shock domain family protein n=2 Tax=unclassified Gammaproteobacteria RepID=A4A3Y7_9GAMM Length = 189 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+GTVKWFN KGFGFI E G E IF H+ +I +G R+L+ G V++ V KG A Sbjct: 124 EEGTVKWFNGTKGFGFIIRENGDE-IFVHHRSIIGEGRRSLRDGAPVRYRVVTTDKGPQA 182 Query: 62 SVIVPVE 68 + ++ Sbjct: 183 EEVEALD 189 >UniRef50_P46449 Cold shock-like protein cspD n=53 Tax=Bacteria RepID=CSPD_HAEIN Length = 72 Score = 84.9 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 46/67 (68%), Positives = 53/67 (79%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME G VKWFNNAKGFGFI EG DIFAHYS I+MDGYR+LKAGQ VQF+V KG+H Sbjct: 1 MEIGIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKGSH 60 Query: 61 ASVIVPV 67 A+ I+P+ Sbjct: 61 ATKIIPI 67 >UniRef50_D1BKC9 Cold shock domain protein CspD n=31 Tax=Bacteria RepID=D1BKC9_SANKS Length = 317 Score = 84.5 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 2/76 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTI--QMDGYRTLKAGQSVQFDVHQGPKG 58 M +GTV+WF+ +GFGF+ + G +D+F H S I DG ++L+ GQSV+F++ +G +G Sbjct: 1 MPQGTVRWFDAERGFGFLALDDGADDLFVHASEIVGNDDGTQSLREGQSVEFEIGEGDRG 60 Query: 59 NHASVIVPVEVEAAVA 74 A + A A Sbjct: 61 PQARRVQITGDSAVEA 76 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TV W++ KGFGF+ P+ G D F H ++ G L G V F V G +G A + Sbjct: 164 TVSWYDAGKGFGFVTPDSGEPDAFVHARSLAG-GATELVEGDRVSFSVVPGDRGPQAQDV 222 Query: 65 VPVEVEAAVA 74 V A Sbjct: 223 RVVGGTGRGA 232 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G V ++ +GFGFI P+ GG D+F H S ++ L G V+F V Q +G A Sbjct: 255 EGVVARYDAERGFGFITPDSGGPDLFVHVSVVREGQ--ELYEGDRVRFQVRQSDRGPQAD 312 Query: 63 VI 64 + Sbjct: 313 RV 314 Score = 66.0 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTV W+ KG+GF+ P+GGG +IFAH S I G + GQ V F V +G KG A Sbjct: 82 GTVTWYEPTKGYGFVTPDGGGAEIFAHSSAIVGGGV--IAEGQRVAFLVVEGEKGPQA 137 >UniRef50_B5X2B2 Y-box-binding protein 2-A n=1 Tax=Salmo salar RepID=B5X2B2_SALSA Length = 328 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 31 QGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKG 90 Query: 59 NHASVIV 65 + A+ + Sbjct: 91 SEAANVT 97 >UniRef50_P72192 Temperature acclimation protein B (Fragment) n=85 Tax=cellular organisms RepID=TAPB_PSEFR Length = 63 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 + GTVKWFN+ KGFGFI PE G D+F H+ IQ +G+++LK GQ V F QG KG A Sbjct: 5 QSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKGMQA 63 >UniRef50_B3QZU5 Cold shock-like protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZU5_PHYMT Length = 85 Score = 84.1 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFIC-PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 KG +WFN KGFGF+ + +DIF H + I+ +G+R+L G+ V+F + QG KG A Sbjct: 14 KGVCRWFNKDKGFGFLQKLDSDSQDIFFHQTDIKCEGFRSLDEGEEVEFTLVQGEKGPQA 73 Query: 62 SVIVPVEVEA 71 IV ++ Sbjct: 74 IEIVRFTKQS 83 >UniRef50_Q0BPU3 Cold shock protein n=2 Tax=Alphaproteobacteria RepID=Q0BPU3_GRABC Length = 100 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 39/64 (60%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN KG+GFI P G +D+F H S +Q G R+L GQ + F++ Q G Sbjct: 32 MLHGTVKWFNPTKGYGFIAPSTGEKDVFVHISAVQRAGLRSLNEGQQLDFEIEQQQNGRA 91 Query: 61 ASVI 64 A+V Sbjct: 92 AAVN 95 >UniRef50_Q2S3Y3 'Cold-shock' DNA-binding domain, putative n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3Y3_SALRD Length = 69 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ME GTVKWF+ A+G+GF+ P+ G +D+F H+S + + L+ G ++F++ + KG + Sbjct: 1 METGTVKWFSPAEGYGFVEPDNGEDDVFLHHSEVPDE---DLEEGDRLEFEIEETEKGLN 57 Query: 61 ASVIVPVEVE 70 A I + Sbjct: 58 AVNIEALTEP 67 >UniRef50_C4QN75 Y box binding protein, putative n=10 Tax=cellular organisms RepID=C4QN75_SCHMA Length = 231 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 KG VKWFN G+GFI + DIF H S I + R+L+ G+ V+F V +G KG Sbjct: 27 KGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKG 86 Query: 59 NHASVIVPVEVEA 71 + AS + E Sbjct: 87 DEASEVTGPGGEP 99 >UniRef50_UPI000051480C PREDICTED: similar to ypsilon schachtel CG5654-PA n=2 Tax=Apocrita RepID=UPI000051480C Length = 279 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 GTVKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KG Sbjct: 25 TGTVKWFNVKSGYGFINRNDTKEDVFVHQSAIVKNNPRKAVRSVGDGEVVEFDVVIGEKG 84 Query: 59 NHASVIVPVEVEA 71 + A+ + EA Sbjct: 85 HEAANVTGPSGEA 97 >UniRef50_Q38896 Glycine-rich protein 2b n=125 Tax=cellular organisms RepID=GRP2B_ARATH Length = 201 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-NH 60 KGTVKWF+ KGFGFI P GG+D+F H S+I+ +G+R+L A +SV+FDV G Sbjct: 15 RKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGRPK 74 Query: 61 ASVIVPVEVEA 71 A + + Sbjct: 75 AIEVSGPDGAP 85 >UniRef50_D0KX28 Cold-shock DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KX28_HALNC Length = 143 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN KGFGFI E G ED+F H+ + L GQ V++ + QG KG A Sbjct: 80 GHVKWFNTDKGFGFIVRENG-EDLFVHFRAVGDGSTLQLVEGQKVEYHIGQGRKGPQAEQ 138 Query: 64 IVPVE 68 +V ++ Sbjct: 139 VVILD 143 >UniRef50_Q11GE9 Cold-shock DNA-binding protein family n=10 Tax=Alphaproteobacteria RepID=Q11GE9_MESSB Length = 70 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 + GTVK+FN KGFGFI P+ G +D+F H S ++ G R+L GQ V FDV KG Sbjct: 3 QTGTVKFFNATKGFGFITPDNGQKDVFVHISAVEASGMRSLVDGQKVSFDVEPDRMGKGP 62 Query: 60 HASV 63 A Sbjct: 63 KAVN 66 >UniRef50_D0MCR5 Cold-shock DNA-binding domain protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MCR5_RHOM4 Length = 76 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT-LKAGQSVQFDVHQGPKGNH 60 ++G VKWFN KG+GFI P G +D+F H + + G+ L+ G+ V ++V + PKG Sbjct: 3 QRGRVKWFNIDKGYGFIEPNDGSKDVFVHRNNVPGLGWDEGLREGEEVSYEVERTPKGLS 62 Query: 61 ASVIVPVEVEA 71 A + + + Sbjct: 63 AMNVERLSRSS 73 >UniRef50_B7RWZ3 'Cold-shock' DNA-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RWZ3_9GAMM Length = 145 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWFN +KGFGFI + G E+IF H+ +I +G R LK GQ V F KG A Sbjct: 81 EEGEVKWFNVSKGFGFITKDDG-EEIFVHFRSIIGEGRRGLKDGQRVSFVEANTDKGPQA 139 Query: 62 SVIVPV 67 + P+ Sbjct: 140 ENVEPL 145 >UniRef50_Q1YTJ3 Cold shock protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ3_9GAMM Length = 89 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 34/70 (48%), Positives = 44/70 (62%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+N +GFGFI P+ G ++FAH+ I M+GY+TLK Q V +DV G G HA Sbjct: 4 TGRVKWFSNDRGFGFIEPDNGERELFAHHQNIIMEGYKTLKCFQRVTYDVEHGKNGRHAV 63 Query: 63 VIVPVEVEAA 72 I+P E Sbjct: 64 NIIPGEAPKP 73 >UniRef50_Q0SKK0 Cold shock protein n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0SKK0_RHOSR Length = 119 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 39/67 (58%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 + GTV+WFN +GFGF+ P G +DIF H S I DG+R L+ GQ V F V + G+ Sbjct: 53 LRTGTVRWFNAEQGFGFLAPADGSDDIFVHVSEIAGDGHRILEEGQRVSFAVCRTETGDQ 112 Query: 61 ASVIVPV 67 A + Sbjct: 113 ARDVRIA 119 >UniRef50_A0NEN6 AGAP006108-PA n=4 Tax=Culicimorpha RepID=A0NEN6_ANOGA Length = 402 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 G VKWFN G+GFI ED+F H S I + R++ G+ V+FDV G KG Sbjct: 89 TGVVKWFNVKSGYGFINRGDTQEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIGEKG 148 Query: 59 NHASVIVPVEVEA 71 N A+ + + E Sbjct: 149 NEAANVTGPQGEP 161 >UniRef50_Q2P2A6 Major cold shock protein n=21 Tax=Gammaproteobacteria RepID=Q2P2A6_XANOM Length = 69 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 33/64 (51%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN+AKGFGFI PE G D+F H+ IQ G+++L+ GQ V F QG KG A Sbjct: 7 GIVKWFNDAKGFGFITPESG-PDLFVHFRAIQGTGFKSLQEGQKVTFVAVQGQKGMQADQ 65 Query: 64 IVPV 67 + V Sbjct: 66 VQAV 69 >UniRef50_O13015 Y box protein 2 n=4 Tax=Clupeocephala RepID=O13015_CARAU Length = 297 Score = 82.5 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + KG Sbjct: 22 EGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKG 81 Query: 59 NHASVIV 65 + A+ + Sbjct: 82 SEAANVT 88 >UniRef50_Q9Z3S6 Cold shock protein cspA n=72 Tax=Bacteria RepID=CSPA_RHIME Length = 69 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M GTVKWFN+ KGFGFI P+ G D+F H S ++ G R+L GQ V +D+ + K G Sbjct: 1 MNSGTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGK 60 Query: 60 HASVIVPV 67 ++ + Sbjct: 61 SSADNLRA 68 >UniRef50_B1Z823 Cold-shock DNA-binding domain protein n=34 Tax=Alphaproteobacteria RepID=B1Z823_METPB Length = 69 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK-GN 59 M+ GTVKWFN KG+GFI P+ GG+D+F H S ++ G R L GQ + ++V + G Sbjct: 1 MDTGTVKWFNETKGYGFIQPDNGGKDVFVHISAVERAGLRNLVEGQKISYEVLTDKRSGK 60 Query: 60 HAS 62 A+ Sbjct: 61 DAA 63 >UniRef50_A7HXE8 Putative cold-shock DNA-binding domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HXE8_PARL1 Length = 199 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 40/71 (56%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+ KG+GFI PE GG+D+ H S ++ G L G +V + + PKG A Sbjct: 39 TGVVKWFDAVKGYGFIIPENGGDDVLVHLSCLKQAGLEALDEGTTVTCEAVRRPKGAQAI 98 Query: 63 VIVPVEVEAAV 73 +V V+ A+ Sbjct: 99 RVVDVDDTTAI 109 Score = 62.5 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 34/62 (54%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWFN A+G+GF+ G DIF H T++ G R L GQ + +GPKG + I Sbjct: 137 IVKWFNRARGYGFVTRGEGTPDIFIHMETLRRYGIRDLLPGQQINVRFGEGPKGLMVAEI 196 Query: 65 VP 66 P Sbjct: 197 AP 198 >UniRef50_B3EP04 Cold-shock DNA-binding domain protein n=13 Tax=Chlorobiaceae RepID=B3EP04_CHLPB Length = 96 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGNH 60 K VKWF+ KG+GFI GGEDIF H+S I + ++ L V+F++ Q KG Sbjct: 3 RKSKVKWFDGKKGYGFIVNPDGGEDIFVHFSAIVSEQSFKVLNQDAEVEFEIDQTQKGMQ 62 Query: 61 ASVIVPVEVEAAV 73 A + + + AV Sbjct: 63 AKNVCEICQQGAV 75 >UniRef50_C4QN73 Y box binding protein, putative n=4 Tax=Bilateria RepID=C4QN73_SCHMA Length = 167 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 KG VKWFN G+GFI + DIF H S I + R+L+ G+ V+F V +G KG Sbjct: 27 KGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISRNNPEKLQRSLQEGEEVEFYVVEGDKG 86 Query: 59 NHASVIVPVEVEA 71 + AS + E Sbjct: 87 DEASEVTGPGGEP 99 >UniRef50_B4SCC3 Cold-shock DNA-binding domain protein n=4 Tax=cellular organisms RepID=B4SCC3_PELPB Length = 69 Score = 82.2 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWFN KG+GFI GG+D+F H+S I G +TL GQ V +V QG KG A Sbjct: 6 EGTVKWFNEEKGYGFIEQ-KGGKDVFVHHSAINGTGRKTLVEGQKVMMEVTQGAKGLQAE 64 Query: 63 VIVPV 67 + P+ Sbjct: 65 DVTPL 69 >UniRef50_UPI0000589074 PREDICTED: similar to ENSANGP00000011455 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000589074 Length = 234 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 38/68 (55%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G KWF+ AK +GF+ P+ G D+F H I+M GYR+L + V++ KG A+ Sbjct: 64 RGKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKMVGYRSLDTNEEVEYKFQFSEKGREAT 123 Query: 63 VIVPVEVE 70 + V+ Sbjct: 124 TVTGVDGG 131 >UniRef50_B6QZ94 Cold-shock DNA-binding domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZ94_9RHOB Length = 215 Score = 82.2 bits (202), Expect = 5e-15, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 + GTVK+F KGFGFI P+ G D+F H S ++ G TL +GQ + F+ KG Sbjct: 122 QSGTVKFFKLDKGFGFITPDEGENDVFVHISAVERSGLTTLDSGQRISFETEPDRRGKGP 181 Query: 60 HASVIVPVEVEAAVA 74 A + + AA + Sbjct: 182 KAVELRLEDGPAASS 196 >UniRef50_A8PLB9 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8PLB9_BRUMA Length = 205 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 8/76 (10%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAH--------YSTIQMDGYRTLKAGQSVQFDVHQG 55 GT KWFN KG+GFI P+ GG+D+F H S + MDG+R+L AG+ V+F + + Sbjct: 11 GTCKWFNVLKGYGFITPDEGGDDVFVHQASGVFFIQSELNMDGFRSLDAGERVRFVIRRR 70 Query: 56 PKGNHASVIVPVEVEA 71 P+GN A+ +V E Sbjct: 71 PEGNEATAVVSAEPGG 86 >UniRef50_O62213 Protein F33A8.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=O62213_CAEEL Length = 208 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 KGTVKWFN G+GFI EDIF H + I + R+L + V FD+ +G KG Sbjct: 22 KGTVKWFNVKNGYGFINRTDTNEDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKG 81 Query: 59 NHASVIVPVEVEA 71 A+ + + Sbjct: 82 LEAASVTGPDGGP 94 >UniRef50_D2QP83 Cold-shock DNA-binding domain protein n=5 Tax=Bacteroidetes RepID=D2QP83_9SPHI Length = 198 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ GTVK+FN KGFGFI + G+DIF H S + + V+F + G KG + Sbjct: 136 LQTGTVKFFNETKGFGFIKSDSSGDDIFVHVSALIDQ----IHENDKVRFSIEHGRKGLN 191 Query: 61 ASVIVPV 67 A I + Sbjct: 192 AVNIKLL 198 >UniRef50_D1AYL8 Cold-shock DNA-binding domain protein n=3 Tax=cellular organisms RepID=D1AYL8_STRM9 Length = 65 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN KGFGFI E G +D F H+S I G++T+ G+ V+FD+ G KG A+ Sbjct: 3 GKVKWFNEKKGFGFISGEDG-KDYFLHFSKINKGGFKTVNEGEEVEFDIEDGEKGPQATN 61 Query: 64 IV 65 +V Sbjct: 62 VV 63 >UniRef50_B3DPK3 Cold shock protein n=7 Tax=Bifidobacterium RepID=B3DPK3_BIFLD Length = 79 Score = 81.8 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 4/78 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGP 56 M +GTVK+F KGFGFI P+ GGED+F HY+ I+ DG ++ L G V++ Sbjct: 1 MAQGTVKFFLAKKGFGFIQPDDGGEDVFVHYAEIKDDGSTNKFKMLYEGDRVEYTPASSG 60 Query: 57 KGNHASVIVPVEVEAAVA 74 KG A +V + A + Sbjct: 61 KGTQAKDVVKLSSGEARS 78 >UniRef50_UPI0001555D69 PREDICTED: similar to LD37574p, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D69 Length = 281 Score = 81.8 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 G VKWFN G+GFIC ED+F H S I + R++ G+ VQFD+ G KG Sbjct: 38 GVVKWFNVRHGYGFICRIDMQEDVFIHQSAIVRNNPRKCQRSVGEGEVVQFDLVAGAKGT 97 Query: 60 HASVIVPVEVEA 71 A+ + + Sbjct: 98 EAANVTGLGGTP 109 >UniRef50_D1A5P8 Cold-shock DNA-binding domain protein n=33 Tax=Actinobacteridae RepID=D1A5P8_THECD Length = 135 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW++ KGFGF+ + GGE +F H S + G +LK GQ V+F V +G +G A Sbjct: 6 PTGKVKWYDAGKGFGFLTRDDGGE-VFVHSSALPS-GVTSLKTGQRVEFGVVEGRRGQQA 63 Query: 62 SVIVPVEVEAAV 73 + ++ +V Sbjct: 64 LSVRTLDPLPSV 75 >UniRef50_B0T8T3 Cold-shock DNA-binding domain protein n=40 Tax=Bacteria RepID=B0T8T3_CAUSK Length = 179 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 2/76 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK--G 58 M G VKWFN AKGFGFI PE GG+D+F H + ++ G L G V +++ + + Sbjct: 1 MANGVVKWFNPAKGFGFIQPEDGGQDVFVHIAAVERSGLSGLNEGDQVTYEMEEDRRSGK 60 Query: 59 NHASVIVPVEVEAAVA 74 A + AA + Sbjct: 61 TSAGNLRVTGQGAAPS 76 Score = 74.8 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 34/53 (64%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPK 57 VKWFN+ KGFGFI P+ GG DIF H S ++ G R L GQ V +++ Q + Sbjct: 115 VVKWFNSTKGFGFIQPDNGGGDIFVHISAVERAGLRGLNEGQQVGYELEQDRR 167 >UniRef50_B9KKC8 Cold-shock DNA-binding protein family n=21 Tax=Rhodobacteraceae RepID=B9KKC8_RHOSK Length = 83 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 39/62 (62%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVKWFN+ KGFGFI P+ GG+D+F H S ++ G + L Q + +++ G G Sbjct: 16 MPTGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGYELQSGRDGRS 75 Query: 61 AS 62 ++ Sbjct: 76 SA 77 >UniRef50_Q23960 Y-box protein n=1 Tax=Dugesia japonica RepID=Q23960_DUGJA Length = 266 Score = 81.0 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTI----QMDGYRTLKAGQSVQFDVHQGPKG 58 G VKWFN +G+GF+C EDIF H S I +++ G+ + FD+ +G KG Sbjct: 30 TGKVKWFNVKRGYGFVCRNDNQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKG 89 Query: 59 NHASVIVPVEVE 70 N A+ + ++ + Sbjct: 90 NEAANVSAIDGK 101 >UniRef50_B8KR01 'Cold-shock' DNA-binding domain protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KR01_9GAMM Length = 123 Score = 80.2 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG++KWFN KGFGFI + G E +F H+ ++ R +K GQ V + V + +G A Sbjct: 60 KGSIKWFNATKGFGFITGDDGNE-VFVHFRNVEQLSKREIKPGQRVAYRVTETERGPQAE 118 Query: 63 VIVPV 67 + P+ Sbjct: 119 DVSPL 123 >UniRef50_A9W6T1 Cold-shock protein DNA-binding n=32 Tax=Bacteria RepID=A9W6T1_METEP Length = 281 Score = 80.2 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 37/64 (57%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKW++ AKGFGF+ GG+D+F H S + G +L GQ V V +G KG AS Sbjct: 216 TGTVKWYDPAKGFGFVSVNDGGKDVFVHRSALSRAGLDSLAEGQQVTLGVVEGQKGREAS 275 Query: 63 VIVP 66 I Sbjct: 276 SITV 279 Score = 71.8 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 33/70 (47%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H ++ G+ L G + QG KG + + Sbjct: 81 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHDDLLPGTRLTVQTAQGQKGPQVTAV 140 Query: 65 VPVEVEAAVA 74 V+ A A Sbjct: 141 NSVDTSTAEA 150 >UniRef50_B0UEI2 Cold-shock DNA-binding domain protein n=11 Tax=Alphaproteobacteria RepID=B0UEI2_METS4 Length = 242 Score = 80.2 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 38/66 (57%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKW++ AKGFGF+ + GG+D+F H S + G +L GQ V V +G KG A Sbjct: 177 SGTVKWYDPAKGFGFVSVKDGGKDVFVHRSALARAGLDSLAEGQQVTMGVVEGQKGREAQ 236 Query: 63 VIVPVE 68 I E Sbjct: 237 SITVAE 242 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 33/70 (47%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D F H ++ G+ L G + QG KG + I Sbjct: 65 TVKWFNKEKGFGFVELGDGSGDAFLHIRAVEAAGHADLLPGTRLTVQTAQGQKGPQVTNI 124 Query: 65 VPVEVEAAVA 74 V+ A A Sbjct: 125 TSVDTSTAEA 134 >UniRef50_UPI00017B0A95 UPI00017B0A95 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B0A95 Length = 321 Score = 79.8 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQ-G 55 + +GTVKWFN G+GFI ED+F H + I+ + R++ G+ V+FDV + Sbjct: 29 LVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGELVEFDVIEAA 88 Query: 56 PKGNHASVIV 65 KG+ A+ + Sbjct: 89 KKGSEAANVT 98 >UniRef50_C8WCQ1 Cold-shock DNA-binding domain protein n=18 Tax=Alphaproteobacteria RepID=C8WCQ1_ZYMMN Length = 303 Score = 79.8 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 24/62 (38%), Positives = 35/62 (56%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVK+FN KGFGFI + G D F H S ++ G +L G + F++ +G +A+ Sbjct: 236 SGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGLPSLNEGDRLSFELEVDRRGKYAA 295 Query: 63 VI 64 V Sbjct: 296 VN 297 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VK+FN+ KGFGF+ + GGED+F H S ++ G L GQ + F + G ++ Sbjct: 137 TGVVKFFNSQKGFGFVVRDDGGEDVFVHISAVEQAGLTGLAEGQPLSFTLV-DRGGRVSA 195 Query: 63 VIVPVEVEAAV 73 + +E E Sbjct: 196 TNLGIEGEPLP 206 >UniRef50_A5V9E9 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=A5V9E9_SPHWW Length = 198 Score = 79.8 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ +GFGFI +G D+ H+S ++ G RTL G + +V +G A Sbjct: 36 GAVKWFDATRGFGFIATDGDRGDVLVHFSVLRDHGRRTLPEGARIACEVVARDRGLQARR 95 Query: 64 IVPVEVEAAV 73 I+ +++ A Sbjct: 96 ILAIDLSTAT 105 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 VKWFN KG+GF+ +G +DIF H T++ G L ++ + +G KG A Sbjct: 136 IVKWFNRLKGYGFLVRDGETQDIFIHMETVRRAGLPDLLPETRMKARIAEGRKGPLAVE 194 >UniRef50_A5VRP5 Cold-shock family protein n=37 Tax=Brucellaceae RepID=A5VRP5_BRUO2 Length = 83 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 + G VK+FN KGFGFI P+ GG DIF H S +Q G L Q V ++ KG Sbjct: 15 QTGQVKFFNTEKGFGFIKPDDGGADIFVHISAVQASGLPGLADNQKVSYETEPDRRGKGP 74 Query: 60 HASVIVP 66 A I Sbjct: 75 KAVNITI 81 >UniRef50_Q6ALH9 Hypothetical cold-shock protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALH9_DESPS Length = 204 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN- 59 M GT+K +N+ KG+GFI P+ GG D+F H + +R + GQ + + G KG Sbjct: 1 MNFGTIKHWNDEKGYGFITPDNGGNDVFLHIKAFKKRPHR-PEIGQVISYGTTSGDKGRL 59 Query: 60 HASVIVPVEVEAA 72 A + +E +++ Sbjct: 60 RACNVQYMEDKSS 72 >UniRef50_UPI0000F32A39 PREDICTED: Bos taurus similar to transcription factor EF1(A) (LOC783156), mRNA. n=2 Tax=Laurasiatheria RepID=UPI0000F32A39 Length = 313 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 5/66 (7%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKGN 59 GTVKWFN G+GFI ED+F H + I+ + R++ G++ +FDV +G KG Sbjct: 61 GTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGET-EFDVVEGGKGA 119 Query: 60 HASVIV 65 A+ + Sbjct: 120 EAANVT 125 >UniRef50_C2E292 Cold-shock protein n=9 Tax=Lactobacillus RepID=C2E292_9LACO Length = 73 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK F++A GFGFI + F Y+ I+ GY++L+ GQ V++ + QG KG Sbjct: 1 MRTGTVKQFDSAAGFGFIDDDLTKASYFVFYTAIKEAGYKSLEIGQRVRYQLAQGKKGLQ 60 Query: 61 ASVI 64 + Sbjct: 61 CINV 64 >UniRef50_Q2RZT3 Conserved domain protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZT3_SALRD Length = 75 Score = 79.1 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGN 59 MEKG +K+F+ ++GFGFI P G ED+F H + I L+ GQ+++++ Q KG Sbjct: 1 MEKGKLKFFDTSRGFGFIEPLDGSEDVFLHANNISGMTSGEDLREGQTIEYETEQTEKGL 60 Query: 60 HASVIVPVEVEA 71 A P + + Sbjct: 61 SALNAAPADETS 72 >UniRef50_B9F7B8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9F7B8_ORYSJ Length = 233 Score = 79.1 bits (194), Expect = 5e-14, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 KGTVK F+ GFGFI P+ GED+F H S+++ D YR+L ++ V G G A Sbjct: 7 KGTVKGFDATNGFGFITPDDDGEDLFIHQSSLKFDDYRSLNDSDVIELSVGSGNDGRNKA 66 Query: 62 SVIVPVEVEA 71 + + + Sbjct: 67 VDVTALGGDT 76 >UniRef50_A7BYF1 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BYF1_9GAMM Length = 189 Score = 77.9 bits (191), Expect = 8e-14, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G V F+ +GFGFI + ED+F H I+ +L GQ V+FD Q KG A Sbjct: 2 EGIVVKFDKKRGFGFIRSDKFSEDVFVHLKNIREQQ--SLSPGQKVEFDTEQTDKGLSAI 59 Query: 63 VIVPVEVEAAV 73 ++P + + + Sbjct: 60 NVIPGKKQTSP 70 >UniRef50_A8ILK3 Cold shock protein n=9 Tax=Proteobacteria RepID=A8ILK3_AZOC5 Length = 237 Score = 77.9 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 38/65 (58%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GTVKW+N KGFGFI EGGG+D+F H + + G L GQ V V QGPKG A Sbjct: 173 GTVKWYNPEKGFGFIAVEGGGKDVFVHVTVVSRSGLADLSEGQRVVVQVGQGPKGPEARG 232 Query: 64 IVPVE 68 I + Sbjct: 233 IEVAD 237 Score = 71.4 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ G D+F H ++ G ++ G + V QG KG + + Sbjct: 69 TVKWFNPEKGFGFVELSDGSGDVFLHARALEAAGQESVPPGSKLSVRVGQGQKGRQVTEV 128 Query: 65 VPVEVEAAVA 74 + V+ A A Sbjct: 129 LEVDTSTAEA 138 >UniRef50_B9JZ17 Cold shock protein n=106 Tax=Alphaproteobacteria RepID=B9JZ17_AGRVS Length = 71 Score = 77.9 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 31/68 (45%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP--KGN 59 E G VK+FNN KGFGFI P+ GG DIF H S +Q G L Q V FD KG Sbjct: 3 ETGIVKFFNNDKGFGFIKPDNGGADIFVHISAVQASGLNGLSENQKVSFDTEPDRRGKGP 62 Query: 60 HASVIVPV 67 A + Sbjct: 63 KAVNLQIA 70 >UniRef50_Q4SGH3 Chromosome undetermined SCAF14594, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SGH3_TETNG Length = 179 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 7/69 (10%) Query: 3 KGTVKWFNNAKGFGFIC-------PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGFI P D+F H S + M+G+R+L+ G++++F + Sbjct: 5 SGVCKWFNMRMGFGFISMSSRDGAPLDQNLDVFVHQSKLHMEGFRSLREGEALEFSFKKS 64 Query: 56 PKGNHASVI 64 KG A + Sbjct: 65 SKGLEAVRV 73 >UniRef50_B2IBA0 Cold-shock DNA-binding domain protein n=2 Tax=Rhizobiales RepID=B2IBA0_BEII9 Length = 205 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 37/69 (53%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWFN KGFGF+ G EDIF H ++ G L G+ ++ QGPKG A + Sbjct: 135 KVKWFNRVKGFGFLSRGDGTEDIFVHMEILRRHGISILHPGEELRARFGQGPKGLIAIEV 194 Query: 65 VPVEVEAAV 73 P++ A V Sbjct: 195 RPLDAPAPV 203 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G +KWF+ KG+GF+ + G D+ H + ++ DG+ G V + +G KG Sbjct: 34 SGRIKWFDLVKGYGFVVADNGLGDVLLHVTALRKDGHSKACEGARVVCEAMRGTKGWQVF 93 Query: 63 VIVPVEVEAA 72 ++ ++ A Sbjct: 94 RVISLDAPAP 103 >UniRef50_A4V6J7 Y-Box factor protein (Fragment) n=1 Tax=Dugesia japonica RepID=A4V6J7_DUGJA Length = 178 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD---GYRTLKAGQSVQFDVHQGPKG 58 G VKW+N KG+GFI + ED+F H S I ++L + V FDV +G KG Sbjct: 3 RGGKVKWYNVKKGYGFIHRDDVDEDVFVHQSAISRCQPGKQKSLGEDEDVLFDVVKGSKG 62 Query: 59 NHASVIVPVEVEA 71 N A + +A Sbjct: 63 NEAMNVTGPNGDA 75 >UniRef50_B6IXJ6 Cold shock-like protein CspA n=1 Tax=Rhodospirillum centenum SW RepID=B6IXJ6_RHOCS Length = 199 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 43/66 (65%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G+VKWF + KGFGF+ + GG+D+F H S ++ G +L++G+ V V + PKG A+ Sbjct: 134 EGSVKWFKDDKGFGFVTTDDGGKDVFVHKSILRRAGLESLQSGERVLMRVTEAPKGREAT 193 Query: 63 VIVPVE 68 I ++ Sbjct: 194 WIQLLD 199 Score = 66.0 bits (160), Expect = 4e-10, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 32/69 (46%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN KGFGF+ P G D F H S + G L G V + GPKG + Sbjct: 46 TVKWFNGVKGFGFVAPADGTPDAFLHASVLSRVGLSDLAEGAEVMVVIGPGPKGPQVIRL 105 Query: 65 VPVEVEAAV 73 V V + Sbjct: 106 VDVIGGGSP 114 >UniRef50_Q4H2L8 Y-box protein 1/2/3 n=2 Tax=Ciona intestinalis RepID=Q4H2L8_CIOIN Length = 320 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGY----RTLKAGQSVQFDVHQGPKG 58 G VKWFN G+GF+ + ED+F H + I + R++ G++V+FDV +G KG Sbjct: 27 SGVVKWFNVRNGYGFVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKG 86 Query: 59 -NHASVIVPVEVEA 71 A+ + E Sbjct: 87 LPEAANVTGPNGEP 100 >UniRef50_C1E859 Cold-shock protein with RNA binding domain n=2 Tax=Micromonas RepID=C1E859_9CHLO Length = 305 Score = 77.2 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 KG V WFN AKGFGF+ + G D+F H S I +G+R+L+ + V+F++ G A Sbjct: 45 KGVVNWFNVAKGFGFVTRDDGVGDVFVHQSDIYAEGFRSLRDQEPVEFELEPMGDGRYKA 104 Query: 62 SVIVPVEVE 70 + + Sbjct: 105 VKVTGPDGA 113 >UniRef50_A4TN10 Cold-shock DNA-binding protein family n=35 Tax=Enterobacteriaceae RepID=A4TN10_YERPP Length = 69 Score = 77.2 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 39/66 (59%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ G VKWFN ++G+GFI P GG D++ + + I ++L GQ V+F ++ G Sbjct: 3 LKMGRVKWFNQSEGYGFISPHDGGSDVYVNKTAIANTKNKSLNEGQDVEFSTYRSIHGPS 62 Query: 61 ASVIVP 66 A+ ++ Sbjct: 63 AADVIA 68 >UniRef50_A0M1Q5 Cold shock-like protein n=13 Tax=Bacteria RepID=A0M1Q5_GRAFK Length = 64 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 4/68 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M++G VK+FNN KGFGFI + EDIF H S + + ++ VQF+V QG KG + Sbjct: 1 MQEGKVKFFNNTKGFGFIKADDSNEDIFVHSSGLIDE----IREDDRVQFEVEQGKKGLN 56 Query: 61 ASVIVPVE 68 A + ++ Sbjct: 57 AVNVEVID 64 >UniRef50_Q0VN88 Cold-shock domain family protein n=2 Tax=Alcanivorax RepID=Q0VN88_ALCBS Length = 76 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 ++G VKWFN KGFGFI + G E++F H+ +Q G R+L+ G V+FD +G A Sbjct: 11 QRGEVKWFNPNKGFGFILTDSG-EELFVHFKAVQNGGRRSLRTGTKVRFDTRMSDRGEQA 69 Query: 62 SVI 64 + Sbjct: 70 DNV 72 >UniRef50_Q5JKD6 Cold shock domain protein 2-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JKD6_ORYSJ Length = 221 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN-HA 61 KG VK F+ GF FI P+ G ED+F H S+++ DGYR+L ++ V G A Sbjct: 7 KGMVKGFDATNGFSFITPDDGSEDLFIHQSSLKFDGYRSLNDDDVIELSVGSSDDGRTKA 66 Query: 62 SVIVPVEVEA 71 + +A Sbjct: 67 VDVTAPGSDA 76 >UniRef50_B9T6D3 Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9T6D3_RICCO Length = 266 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-YRTLKAGQSVQFDVH-QGPKGNH 60 +G V F++ KGFGFI P+ GGED+F H+S I+ DG YR+L V+F V Sbjct: 15 RGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEFTVSLSDDNKYQ 74 Query: 61 ASVIVPVEVEA 71 A + Sbjct: 75 AVDVTAPGGGP 85 >UniRef50_Q6ZN17 Protein lin-28 homolog B n=13 Tax=Tetrapoda RepID=LN28B_HUMAN Length = 250 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%) Query: 3 KGTVKWFNNAKGFGFIC-------PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGFI P D+F H S + M+G+R+LK G+ V+F + Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 90 Query: 56 PKGNHASVIVPVEVEA 71 KG + + Sbjct: 91 SKGLESIRVTGPGGSP 106 >UniRef50_Q1NG42 Cold shock protein n=3 Tax=Alphaproteobacteria RepID=Q1NG42_9SPHN Length = 153 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 34/63 (53%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTVK+FN KGFGFI + G D F H S ++ G L G + F++ +G +A Sbjct: 85 ASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMAALNEGDRLDFELEVDRRGKYA 144 Query: 62 SVI 64 +V Sbjct: 145 AVN 147 >UniRef50_P92186 Protein lin-28 n=5 Tax=Caenorhabditis RepID=LIN28_CAEEL Length = 227 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ--GPKGNHA 61 G+ KWFN +KG+GF+ + GED+F H S + M G+R+L G+ V + + + KG A Sbjct: 55 GSCKWFNVSKGYGFVIDDITGEDLFVHQSNLNMQGFRSLDEGERVSYYIQERSNGKGREA 114 Query: 62 SVI 64 + Sbjct: 115 YAV 117 >UniRef50_B6KPP5 Glycine-rich protein 2, putative n=3 Tax=Toxoplasma gondii RepID=B6KPP5_TOXGO Length = 209 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-NH 60 ++G KWF++ KGFGFI E G D+F H + I+ G+R L G+SV+F V G G Sbjct: 88 QRGHCKWFDSKKGFGFITAEDG-TDLFVHQTEIKAQGFRNLAEGESVEFRVQVGHDGKRK 146 Query: 61 ASVIV 65 A + Sbjct: 147 AVSVT 151 >UniRef50_A4FKV9 Putative DNA-binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FKV9_SACEN Length = 150 Score = 76.8 bits (188), Expect = 2e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 38/71 (53%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ GTV F+ KG+GFI P+ GGED+F H S + + L+ G V+F+ G +G Sbjct: 1 MKTGTVVRFDGIKGYGFIAPDAGGEDVFLHASILDEELKEVLRGGMRVEFEAVPGNQGTK 60 Query: 61 ASVIVPVEVEA 71 A + + Sbjct: 61 AMTVNLLGAAT 71 >UniRef50_Q1QLF4 Cold-shock DNA-binding protein family n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QLF4_NITHX Length = 68 Score = 76.0 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN- 59 M+ G+VK+FN KG+GFI P+ G DIF H + D R V+++V +GP G Sbjct: 1 MQTGSVKFFNAEKGYGFIQPDDGTPDIFLHVHGL-ADKLRYPCPRDRVEYEVGKGPDGRL 59 Query: 60 HASVIVPVE 68 A + ++ Sbjct: 60 RAERVALID 68 >UniRef50_D2QU65 Cold-shock DNA-binding domain protein n=23 Tax=Bacteroidetes RepID=D2QU65_9SPHI Length = 68 Score = 76.0 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M+ G VK+FN +KG+GFI + DIF H + + T++ VQF+V G KG + Sbjct: 1 MQTGVVKFFNESKGYGFIVEDDTNRDIFVHITGLNGI---TIREKDRVQFEVVDGKKGLN 57 Query: 61 ASVIVPVEVE 70 A + ++ + Sbjct: 58 AVKVKKIDSD 67 >UniRef50_Q042Q8 Cold-shock DNA-binding protein family n=18 Tax=Lactobacillus RepID=Q042Q8_LACGA Length = 69 Score = 75.6 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 35/64 (54%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KGTVK F++ +GFI + F Y +I+ +GY+ L GQ V++ + QG KG Sbjct: 1 MRKGTVKQFDSNSAYGFIEDDLTHSSYFVFYKSIKEEGYKKLNVGQRVRYQLAQGKKGLQ 60 Query: 61 ASVI 64 + Sbjct: 61 CINV 64 >UniRef50_D2H5S2 Putative uncharacterized protein (Fragment) n=2 Tax=Caniformia RepID=D2H5S2_AILME Length = 276 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%) Query: 3 KGTVKWFNNAKGFGFIC-------PEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGFI P D+F H S + M+G+R+LK G+ V+F + Sbjct: 57 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFMEGFRSLKEGEPVEFTFKKS 116 Query: 56 PKGNHASVIVPVEVEA 71 KG + + Sbjct: 117 SKGLESIRVTGPGGSP 132 >UniRef50_P91306 Y-box protein 2 n=6 Tax=Caenorhabditis RepID=P91306_CAEEL Length = 267 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG-----YRTLKAGQSVQFDVHQGPK 57 +G VKW++ + +GFI G +DIF H + I RTL + V FD+ +G Sbjct: 67 QGKVKWYSVLRRYGFISRNDGEKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKN 126 Query: 58 GNHASVIVPVEVEAAV 73 G A+ + + + Sbjct: 127 GPEAANVTGPNGDNVI 142 >UniRef50_Q803L0 Protein lin-28 homolog A n=13 Tax=Euteleostomi RepID=LN28A_DANRE Length = 202 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Query: 3 KGTVKWFNNAKGFGFICPE-------GGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQG 55 G KWFN GFGF+ D+F H S + M+G+R+LK G++V+F + Sbjct: 35 SGVCKWFNVRMGFGFLSMTHREGICLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKRS 94 Query: 56 PKGNHASVIVPVEVEAAV 73 KG + + V Sbjct: 95 SKGLESLQVTGPGGAPCV 112 >UniRef50_UPI00004F1407 PREDICTED: similar to CSDA protein n=1 Tax=Bos taurus RepID=UPI00004F1407 Length = 323 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDG----YRTLKAGQSVQFDVHQGPKGN 59 GTV WF KG+GFI + ED+F H++ I ++ G+ V+FDV QG G Sbjct: 70 GTVVWFKEKKGYGFISRQDTQEDVFVHHTAITGKNPCTYRGSVDDGEMVEFDVVQGEWGT 129 Query: 60 HASVIVPVEVEA 71 A+ + Sbjct: 130 EAANVTGPAGAP 141 >UniRef50_Q1GT29 Cold-shock DNA-binding protein family n=1 Tax=Sphingopyxis alaskensis RepID=Q1GT29_SPHAL Length = 90 Score = 75.2 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN- 59 M GTVK+FNN KG+GFI E G D F H + +Q G TL Q V +++ G G Sbjct: 23 MAIGTVKFFNNDKGYGFIENEDGSGDSFVHITAVQAAGMDTLNKEQRVSYELETGKNGKV 82 Query: 60 HASVIVPV 67 A + Sbjct: 83 SAINLQSA 90 >UniRef50_Q4UBG6 Cold shock protein, putative n=2 Tax=Theileria RepID=Q4UBG6_THEAN Length = 95 Score = 75.2 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G KWFNN KG+GFI E G ED+F H S I DG+R+L + V+ +V A Sbjct: 6 GVCKWFNNKKGYGFITLENG-EDVFVHQSEIYADGFRSLHENEKVELEVIMDNNRKKAIH 64 Query: 64 IV 65 + Sbjct: 65 VT 66 >UniRef50_A6ESQ3 Cold shock protein n=2 Tax=Bacteroidetes RepID=A6ESQ3_9BACT Length = 63 Score = 75.2 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 4/67 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KG VK+FN++KGFGFI EG +D F H S + + ++ G V+F++ +G KG + Sbjct: 1 MNKGIVKFFNDSKGFGFITEEGQEKDHFVHISGLIDE----VREGDEVEFELKEGNKGLN 56 Query: 61 ASVIVPV 67 A + + Sbjct: 57 AVNVRVL 63 >UniRef50_B9MXF4 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9MXF4_POPTR Length = 235 Score = 75.2 bits (184), Expect = 7e-13, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD-GYRTLKAGQSVQFDVHQGPKGNHA 61 G V F++ KGFGFI P+ G +D+F H+S I+ D GYRTL V+F + A Sbjct: 15 TGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLNDDKYQA 74 Query: 62 SVIVPVEVEA 71 + Sbjct: 75 VDVTAPGGGP 84 >UniRef50_Q016S2 Putative nucleic acid binding protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q016S2_OSTTA Length = 125 Score = 74.5 bits (182), Expect = 9e-13, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 9/79 (11%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRT------LKAGQSVQFDVHQ- 54 +G VKWFN KGFG+I P+ G D+F H S ++M+G+R G SV+FDV Sbjct: 11 RRGKVKWFNCTKGFGYITPDDGEPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVEHE 70 Query: 55 --GPKGNHASVIVPVEVEA 71 + A + + Sbjct: 71 SPTDERLKAVCVTGIGGAP 89 >UniRef50_A0ACJ4 Putative DNA-binding protein n=2 Tax=Streptomyces RepID=A0ACJ4_STRAM Length = 172 Score = 74.5 bits (182), Expect = 9e-13, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G + F+ +G+GFI P+ GGED+F H + + D R L G V+FDV +G +G AS Sbjct: 9 GKIIRFDEFRGYGFIAPDNGGEDVFIHVNDLAFDK-RLLGPGMKVEFDVEEGDRGLKASR 67 Query: 64 IVPVEVEA 71 + A Sbjct: 68 VRIQNGSA 75 >UniRef50_UPI0001B4CA82 DNA-binding protein n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=UPI0001B4CA82 Length = 164 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G V F++ KG+GFI P+ GGED+F H + + G TL +G V FDV G +G Sbjct: 1 MAQGVVVRFDDVKGYGFIAPDNGGEDVFVHVNDLAEPGT-TLTSGTRVVFDVLDGGRGLK 59 Query: 61 ASVIVPVEVEAAV 73 A + A Sbjct: 60 AYDVSLAGPAQAT 72 >UniRef50_Q9EZJ7 Cold shock-like protein CspE (Fragment) n=1 Tax=Brucella abortus RepID=Q9EZJ7_BRUAB Length = 121 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGG-EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G +KWF+ AKG+GFI P+ G DI H ++++ DG++T G + +V G +G Sbjct: 27 SGHIKWFDVAKGYGFIVPDQPGLTDILLHVTSLRRDGFQTALEGARIVCEVRHGDRGLQC 86 Query: 62 SVIVPVEVEAAV 73 ++ ++ A+ Sbjct: 87 FRVLSMDASTAI 98 >UniRef50_A3YF52 Cold-shock protein, DNA-binding n=2 Tax=Marinomonas RepID=A3YF52_9GAMM Length = 79 Score = 74.5 bits (182), Expect = 1e-12, Method: Composition-based stats. Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KGTVKWFN++KG GFI + D+F HY +I +G++TLK GQ+V F + + G AS Sbjct: 6 KGTVKWFNDSKGVGFIQRDN-EADVFVHYKSIVSEGHKTLKKGQAVSFFITENDFGRQAS 64 Query: 63 VI 64 + Sbjct: 65 EV 66 >UniRef50_A8M1B3 Cold-shock DNA-binding domain protein n=2 Tax=Salinispora RepID=A8M1B3_SALAI Length = 138 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 MEKGT+ F++ +G+GFI P GGG+D+F H + D + AG V ++V Q +G Sbjct: 1 MEKGTIVRFDDVRGYGFIAPFGGGDDVFVHANDF-GDQRHAVAAGMRVSYEVVQSERGLK 59 Query: 61 ASVIVPVEVEAA 72 + +V A+ Sbjct: 60 VASVVLESAPAS 71 >UniRef50_C4K358 RNA chaperone, transcription antiterminator n=3 Tax=Enterobacteriaceae RepID=C4K358_HAMD5 Length = 69 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++KG VKWF+ G+GFI PE GG DI+ H + I ++L AGQ V+F G Sbjct: 3 LKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPS 62 Query: 61 ASVIVP 66 A ++ Sbjct: 63 AEDVIA 68 >UniRef50_A8NIV0 'Cold-shock' DNA-binding domain containing protein n=1 Tax=Brugia malayi RepID=A8NIV0_BRUMA Length = 244 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%) Query: 3 KGTVKWFNNAKGFGFICPEGG-GEDIFAHYSTIQMDG-----YRTLKAGQSVQFDVHQGP 56 KG VKW++ +GFI + G D+F H + I RTL G+ V FD+ QG Sbjct: 7 KGKVKWYSVRYHYGFIARDDNKGNDVFVHQTAIAKSRIIKYYLRTLGDGEEVLFDIVQGK 66 Query: 57 KGNHASVIV 65 +G A+ + Sbjct: 67 QGPEAANVT 75 >UniRef50_Q9H9Z2 Protein lin-28 homolog A n=33 Tax=Euteleostomi RepID=LN28A_HUMAN Length = 209 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 4 GTVKWFNNAKGFGFICPE-------GGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP 56 G KWFN GFGF+ D+F H S + M+G+R+LK G++V+F + Sbjct: 42 GICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSA 101 Query: 57 KGNHASVIV 65 KG + + Sbjct: 102 KGLESIRVT 110 >UniRef50_Q2NK56 Cold shock protein n=6 Tax=Bacteria RepID=Q2NK56_AYWBP Length = 74 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD--GYRTLKAGQSVQFDVHQGPKGN 59 E+GT +WF+ KG+GFI G +DIF HYS+IQ + G +TL V+F V +G +G Sbjct: 6 EQGTCRWFSKDKGYGFIISADG-KDIFVHYSSIQTEVFGRKTLNENDKVEFTVKEGDRGA 64 Query: 60 HASVIVPV 67 A +V V Sbjct: 65 QAVDVVVV 72 >UniRef50_Q5YVF2 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YVF2_NOCFA Length = 122 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 33/65 (50%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 GTV WF+ KGFGFI P+ +F + I+ GYRTL AG V + + G A Sbjct: 52 RHGTVAWFDAEKGFGFITPDDRSPAVFVEFHAIEAVGYRTLVAGGPVVYRAEETKAGPEA 111 Query: 62 SVIVP 66 + P Sbjct: 112 VAVRP 116 >UniRef50_B3QHW3 Cold-shock DNA-binding domain protein n=92 Tax=Alphaproteobacteria RepID=B3QHW3_RHOPT Length = 235 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 40/71 (56%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G +KWF+ +KG+GF+ P+ G D+ H + ++ DGY+T G + + Q KG A Sbjct: 70 SGVIKWFDASKGYGFVVPDNGWPDVLLHVTVLRRDGYQTAYEGARIVVECVQRAKGYQAF 129 Query: 63 VIVPVEVEAAV 73 IV ++ A+ Sbjct: 130 RIVSMDESTAI 140 Score = 64.8 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 27/66 (40%), Positives = 35/66 (53%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN +GFGF+ G DIF H T++ G L+ GQ V G KG Sbjct: 160 LERAQVKWFNRLRGFGFLTCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRFGPGSKGMM 219 Query: 61 ASVIVP 66 A+ I P Sbjct: 220 AAEIQP 225 >UniRef50_C9NB66 Cold-shock DNA-binding domain protein n=1 Tax=Streptomyces flavogriseus ATCC 33331 RepID=C9NB66_9ACTO Length = 70 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 37/66 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +GTV+ F+ KG+G+I P GG +I H+S I L AGQ+V FD+ Q +G Sbjct: 1 MAEGTVQVFSAEKGYGYIRPSTGGPEIIVHFSAIVEACPVGLVAGQTVSFDIVQRRRGPE 60 Query: 61 ASVIVP 66 A + Sbjct: 61 AERVQI 66 >UniRef50_A0Z255 Cold shock protein, CspA family-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z255_9GAMM Length = 138 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G +KWFN KGFGFI + G E +F HY ++ R++K GQ V + V +G A Sbjct: 75 EGNIKWFNATKGFGFIVGDDGAE-VFVHYRNVEGLTKRSIKQGQRVAYSVRASDRGPQAE 133 Query: 63 VIVPV 67 + V Sbjct: 134 GVKAV 138 >UniRef50_A3VSH0 Cold shock protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH0_9PROT Length = 173 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 37/68 (54%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VKWF+ KG+GFI E GG D+ H S ++ G T G V + + KG A+ Sbjct: 15 RGFVKWFDQTKGYGFITDEAGGRDVLIHSSCLKQSGRATAPEGAIVTCEAIESEKGLQAT 74 Query: 63 VIVPVEVE 70 I+ +E+ Sbjct: 75 RIINLEIS 82 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 25/62 (40%), Positives = 35/62 (56%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWF+ AKG+GF+ EDIF H ++ G L+ GQ ++ +G KG A+ I Sbjct: 108 TVKWFSRAKGYGFLTATNANEDIFVHMEVVRAAGLSELQPGQRLRASYGRGTKGLLAAAI 167 Query: 65 VP 66 P Sbjct: 168 EP 169 >UniRef50_B9K345 CspA-like protein n=3 Tax=Agrobacterium RepID=B9K345_AGRVS Length = 99 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G +KWF+ KG+GFI + GG D+F H S + TL+ G +++ + + Sbjct: 1 MPTGKLKWFDTTKGYGFITSDDGGPDVFLHLSKVTEANLPTLQPGVRLRYVLGRQGNKVS 60 Query: 61 ASVIVPVEVEAAV 73 A + + EAA Sbjct: 61 AHDLSLMPDEAAT 73 >UniRef50_D1U4V2 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U4V2_9DELT Length = 76 Score = 72.5 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +G V WFN+ KGFGFI + G D+F HY+ I DG+++L+ G+ V + V A Sbjct: 3 REGKVTWFNDKKGFGFITGDDG-LDVFVHYTEIVRDGFQSLEPGERVSYAVTDEEIAPKA 61 Query: 62 SVIVPVEVEA 71 + + A Sbjct: 62 VDVHLADEGA 71 >UniRef50_A0R441 'Cold-shock' DNA-binding domain protein n=18 Tax=Actinomycetales RepID=A0R441_MYCS2 Length = 149 Score = 72.5 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW++ KGFGF+ E G ED++ S + G LK+GQ V+F V G +G A Sbjct: 15 PTGKVKWYDAEKGFGFLSQEDG-EDVYVRSSALP-AGVEALKSGQRVEFGVAAGRRGPQA 72 Query: 62 SVIVPVEVEAAVA 74 + ++ +++ Sbjct: 73 LSLKLIDPPPSLS 85 >UniRef50_A0PKZ5 Cold shock-like protein B CspB n=78 Tax=Actinomycetales RepID=A0PKZ5_MYCUA Length = 184 Score = 72.5 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G VKW+++ KGFGF+ E G ED++ S + G LKAGQ V+F + G +G A Sbjct: 52 PTGKVKWYDSDKGFGFLSQEEG-EDVYVRSSALP-AGVEGLKAGQRVEFGIASGRRGPQA 109 Query: 62 SVIVPVEVEAA 72 + ++ + Sbjct: 110 LSLKLLDPPPS 120 >UniRef50_A5VJ42 Cold-shock DNA-binding protein family n=10 Tax=Lactobacillus RepID=A5VJ42_LACRD Length = 67 Score = 72.1 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M KG VK F+ KG+GFI GE IF HYS I+ R L + V + QG KG Sbjct: 1 MLKGKVKSFDEQKGWGFITVPHEGE-IFVHYSGIEGTRRRILHPDEEVSLVIVQGQKGPQ 59 Query: 61 ASVIVPV 67 A+ + + Sbjct: 60 AAHVRVL 66 >UniRef50_C8SGB1 Cold-shock DNA-binding domain protein n=4 Tax=Mesorhizobium RepID=C8SGB1_9RHIZ Length = 199 Score = 72.1 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 34/65 (52%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKW++ KGFGFI P G +D F H + + G L GQ V + QG KG Sbjct: 135 EGTVKWYDPQKGFGFIAPNKGEKDAFVHATALTRSGISELLEGQMVLVECGQGKKGLEVL 194 Query: 63 VIVPV 67 I V Sbjct: 195 SIRLV 199 Score = 47.5 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIV 65 V WFN KGFGF+ G E + ++ G R + G ++ + + P+G+ + + Sbjct: 47 VMWFNAGKGFGFVKLLDGTE-AYLPVRVLEASGTRDVCEGTRLKVTIEERPRGHQVTKVR 105 Query: 66 PVEVEAA 72 + + A Sbjct: 106 EISSQIA 112 >UniRef50_C4RFH3 DNA binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH3_9ACTO Length = 150 Score = 72.1 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI P+GGG+D+F H +T+ D + L G V+++ + +G Sbjct: 1 MLTGRVVRFDEVRGYGFIAPDGGGDDVFVHANTVDGDKW-ALGPGVPVEYEAVENERGPK 59 Query: 61 ASVIVPVEVEAAVA 74 A + + AVA Sbjct: 60 ALTVRVL--GPAVA 71 >UniRef50_Q11SL0 Cold-shock DNA-binding protein family n=4 Tax=Bacteroidetes RepID=Q11SL0_CYTH3 Length = 63 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GTVK+FNN+KGFGFI + G++ F H S + + ++ V F++ +G KG + Sbjct: 1 MNNGTVKFFNNSKGFGFIIEKESGKEYFVHVSGLVDE----IRENDEVTFELEKGKKGLN 56 Query: 61 ASVIVPV 67 A + V Sbjct: 57 AVNVKLV 63 >UniRef50_Q2W0B3 Cold shock protein n=3 Tax=Magnetospirillum RepID=Q2W0B3_MAGSA Length = 200 Score = 71.8 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 39/65 (60%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +G VK+F+ KGFGF+ + GG+D+F H ++ G +TL++GQ V+ G KG A Sbjct: 136 EGVVKFFSAEKGFGFVACDQGGKDVFVHVKALERSGIKTLESGQRVRVTTTLGLKGPQAD 195 Query: 63 VIVPV 67 + + Sbjct: 196 TVAII 200 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 36/69 (52%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 TVKWFN +KGFGF+ P G D F H S ++ G + G ++ D+ G +G ++ Sbjct: 52 TVKWFNASKGFGFVAPSDGSPDAFLHISALERAGLTQVAEGATLVVDLGAGQRGPQVVMV 111 Query: 65 VPVEVEAAV 73 V+ A Sbjct: 112 HEVDSTTAT 120 >UniRef50_A1VD07 Cold-shock DNA-binding protein family n=4 Tax=Desulfovibrio vulgaris RepID=A1VD07_DESVV Length = 201 Score = 71.8 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQ-GPKGNHA 61 +G + +N+ +GFGFI P+ G +F H S + + G+ V + + PKG A Sbjct: 27 QGKIAQWNDERGFGFISPDDGSPRVFVHISAFRSRHP-LPEVGERVLYYLGPLSPKGPRA 85 Query: 62 SVIVPVEVEAAVA 74 SV+ ++ A Sbjct: 86 SVVRYIDRVQRPA 98 >UniRef50_D1S746 Cold-shock DNA-binding domain protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S746_9ACTO Length = 165 Score = 71.4 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI P+ G +D+F H + + D + L G V++D + +G Sbjct: 7 MLTGKVVRFDEVRGYGFIAPDDGSDDVFVHANMLDGDKW-ALTPGVPVEYDAVETERGPK 65 Query: 61 ASVIVP 66 A ++ Sbjct: 66 AVLVRV 71 >UniRef50_C0CRT9 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRT9_9FIRM Length = 77 Score = 71.4 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E GTVKWF+ KG+GFI + G E F H S I M G+R L+ G+ V + V KG+ A Sbjct: 13 EHGTVKWFDPVKGYGFIAGDNGKE-TFVHQSDILMRGFRHLETGERVSYRVKATEKGDKA 71 Query: 62 SVIV 65 ++ Sbjct: 72 IDVI 75 >UniRef50_B4SFC0 Cold-shock DNA-binding domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SFC0_PELPB Length = 74 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 36/65 (55%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTVKWFN KGFGFI P+ GG D+F H + ++ G TL V++D+ + A Sbjct: 9 TGTVKWFNKMKGFGFIIPDNGGADVFVHINELEKSGLATLNEADKVKYDMVEKNGKVAAG 68 Query: 63 VIVPV 67 I + Sbjct: 69 NIQLL 73 >UniRef50_B9T6B7 Cold shock protein, putative n=1 Tax=Ricinus communis RepID=B9T6B7_RICCO Length = 257 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-NH 60 +G + W++N KG+GFI P GGG D+F H S+++ +G+ L AG ++++ G Sbjct: 110 ARGILIWYSNEKGYGFIKPNGGGVDVFVHSSSLKSNGHIHLGAGMPLEYETIISNAGKLQ 169 Query: 61 ASVIVPVEVE 70 A + + + Sbjct: 170 AINVTAPKGK 179 >UniRef50_Q127M7 Cold-shock DNA-binding protein family n=2 Tax=Betaproteobacteria RepID=Q127M7_POLSJ Length = 193 Score = 70.6 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH-AS 62 GT+K +N +G GFI + GG++IF H S DG R G+ + F+V G A Sbjct: 10 GTLKKWNAERGLGFIVADQGGQEIFVHISAFPRDG-RLPAVGEPLSFEVEPDRDGKKCAV 68 Query: 63 VIVPVEVEAAVA 74 I A Sbjct: 69 RIHRRGASQPTA 80 >UniRef50_C0WQD2 Possible cold-shock protein n=3 Tax=Lactobacillus RepID=C0WQD2_LACBU Length = 93 Score = 70.6 bits (172), Expect = 1e-11, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G VK +N GFGFI + G +++F + + Y + G V + V +G KG Sbjct: 23 MLYGKVKTYNAKNGFGFITQDQG-DNLFFFKNAFHGEDYSRIVPGIRVSYVVVEGQKGPQ 81 Query: 61 ASVIVPVEVEA 71 A+ VE Sbjct: 82 AAKAQIVEEAG 92 >UniRef50_D1XSW6 Cold-shock DNA-binding domain protein n=3 Tax=Streptomyces RepID=D1XSW6_9ACTO Length = 143 Score = 70.6 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V F+ +G+GFI PE GGED+F H + + ++AG V+F++ G +G Sbjct: 1 MAAGRVIRFDGMRGYGFIAPEHGGEDVFMHVNDLL-IPESAVRAGLMVEFEIEDGDRGLK 59 Query: 61 ASVIVPV 67 AS + Sbjct: 60 ASEVRLA 66 >UniRef50_B0VIQ0 Cold-shock domain family protein n=2 Tax=Bacteria RepID=B0VIQ0_9BACT Length = 74 Score = 70.6 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA---GQSVQFDVHQGPKGN 59 KG VKWFN KG+GFI + E F H+ +I + R LK + V FD+ + KG Sbjct: 6 KGKVKWFNKNKGYGFIITDDNKE-YFVHWKSIVTNSPRELKVLEQDELVTFDLMETDKGI 64 Query: 60 HASVIVPV 67 A I+ V Sbjct: 65 QAINIIRV 72 >UniRef50_Q1ZUW9 Predicted membrane protein n=2 Tax=Photobacterium RepID=Q1ZUW9_PHOAS Length = 204 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH- 60 ++G + +N KGFGFI P+ G +D+F H S + R + +++ F + + KG Sbjct: 3 QQGKIISWNQQKGFGFIAPDNGEQDVFFHVSALPDKQCR-PRINEAITFCIGKDKKGRMS 61 Query: 61 ASVIV 65 A+ + Sbjct: 62 ATTVT 66 >UniRef50_A9ART0 Cold-shock DNA-binding domain protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9ART0_BURM1 Length = 193 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 +GTVKWF+ KG GFI E D F H S + G + G V+FD +G A+ Sbjct: 2 RGTVKWFSKDKGHGFIYGES-AVDYFFHVSDVV--GADAPREGDIVEFDATSNKRGPRAA 58 Query: 63 VIVPVEVE 70 + VE + Sbjct: 59 TVRIVERQ 66 >UniRef50_Q7NNC3 Gsr0488 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NNC3_GLOVI Length = 65 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 36/65 (55%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 V+WF+ G+G I + GE++F ++ I +GYRT+ +V F++ QGP G A + Sbjct: 1 MVRWFDLQAGYGAIARDDTGEEVFLLFTAIPGEGYRTIAPSTAVHFELAQGPSGPVARNV 60 Query: 65 VPVEV 69 E Sbjct: 61 QKSEP 65 >UniRef50_C0WXT4 Cold shock protein Csp n=3 Tax=Lactobacillus fermentum RepID=C0WXT4_LACFE Length = 70 Score = 70.2 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M + T+K ++ KG+G+I G D++ H I+ ++ GQ+V+ + QG +G Sbjct: 1 MIQATIKSYDPTKGWGYITTPQDG-DVYFHRRAIEGRSRVPIQKGQAVEMVIVQGQRGPQ 59 Query: 61 ASVIVPVEVE 70 A+ + ++ E Sbjct: 60 AAHVTIIQRE 69 >UniRef50_Q607Y7 Cold-shock DNA-binding domain protein n=1 Tax=Methylococcus capsulatus RepID=Q607Y7_METCA Length = 305 Score = 69.8 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 GTV F + KGFGFI P+ GG++ F H S + + AG + F+ + KG A Sbjct: 238 SGTVLSFFHEKGFGFITPDNGGDNFFFHVSDLTGIEASDVCAGLRISFNAGRNDKGLAAH 297 Query: 63 VIVPVEVE 70 I + + Sbjct: 298 NIRKLTHQ 305 >UniRef50_A4VQF2 Cold-shock DNA-binding domain protein n=12 Tax=Bacteria RepID=A4VQF2_PSEU5 Length = 235 Score = 69.8 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 +GT+K +N+ KGFGFI PE GGE++F H S + G R G V F + +G Sbjct: 3 RRGTLKSWNDDKGFGFIRPEQGGEELFVHISAV--HGERRPLVGGRVLFVAGRDAQGRLR 60 Query: 62 SVIVPVEVE 70 + V ++ Sbjct: 61 AEHVRLDAP 69 >UniRef50_A6CF18 Probable cold shock protein scoF n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CF18_9PLAN Length = 65 Score = 69.8 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M GT+K KGFGFI G +DIF H S++ + L GQ+V+F+ + +G Sbjct: 1 MATGTIKKI-TEKGFGFI--NDGQQDIFFHLSSLDGVTFDQLVEGQTVEFETEKSDRGLR 57 Query: 61 ASVIVPVE 68 A + E Sbjct: 58 AVRVTTSE 65 >UniRef50_Q1QDZ8 Cold-shock DNA-binding domain protein n=2 Tax=Psychrobacter RepID=Q1QDZ8_PSYCK Length = 253 Score = 69.4 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 8/78 (10%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-N 59 M+ G +K +N+ KG+GFI + ED+F H +++M + GQ V F+ + K Sbjct: 3 MQSGKIKHWNSDKGYGFIDVDNQSEDVFFHIKSVRMAQ--PISKGQRVYFNSERNDKNQL 60 Query: 60 HASVIV-----PVEVEAA 72 A+ + +E A+ Sbjct: 61 RATEVTSDELSILETPAS 78 >UniRef50_Q1RHK6 Cold shock-like protein cspA n=15 Tax=Rickettsia RepID=CSPA_RICBR Length = 70 Score = 69.4 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 31/63 (49%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWFN K FGFI E GG+D+F H S + G L GQ V FD+ A Sbjct: 7 GKVKWFNPTKNFGFIEQENGGKDVFVHRSAVDAAGLAGLNEGQDVIFDLEDKNGKISAVN 66 Query: 64 IVP 66 + Sbjct: 67 LRI 69 >UniRef50_A3ZNF7 Probable cold shock protein scoF n=4 Tax=Planctomycetaceae RepID=A3ZNF7_9PLAN Length = 68 Score = 69.4 bits (169), Expect = 4e-11, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M +G +K KGFGFI G +D+F H S+++ Y L+ GQ+V + QGPKG Sbjct: 4 MPEGKIKRL-TDKGFGFIDT-GSNKDLFFHMSSLEGCRYDDLREGQTVSYVEGQGPKGPR 61 Query: 61 ASVIVPV 67 A + + Sbjct: 62 AEQVQVI 68 >UniRef50_Q1AWL7 Cold-shock DNA-binding protein family n=2 Tax=cellular organisms RepID=Q1AWL7_RUBXD Length = 197 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+G VKWF+ KG+GF+ GGED+F H+S ++ D +L G V+++V + +G +A Sbjct: 134 EQGRVKWFDPEKGYGFLVRP-GGEDLFVHHSEVEGDA-SSLGQGVEVEYEVGRNERGPNA 191 Query: 62 SVIVPV 67 + + Sbjct: 192 RRVRVL 197 >UniRef50_A1B0C7 Cold-shock DNA-binding protein family n=28 Tax=Rhodobacterales RepID=A1B0C7_PARDP Length = 197 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 37/70 (52%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ +KGFGF+ GG DI H + ++ G ++ G V + + P+G A Sbjct: 13 GVVKWFDGSKGFGFLTDPDGGADILLHANVLRNFGQSSVAEGSHVIAIIQKTPRGMQAVE 72 Query: 64 IVPVEVEAAV 73 ++ + A+ Sbjct: 73 VLEITPPASE 82 Score = 62.1 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ AKGFGF D+F H ++ G+ L G+++ V G +G A+ I Sbjct: 107 RVKWFDKAKGFGFANIFADKADVFLHVEVLRHSGFADLAVGEAIALRVVDGRRGMMAAQI 166 Query: 65 VPVEVEAAVA 74 + E A A Sbjct: 167 LSWERAAIEA 176 >UniRef50_Q7WXG5 Putative uncharacterized protein n=2 Tax=Cupriavidus RepID=Q7WXG5_RALEH Length = 191 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Query: 1 MEK-GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGN 59 M+K G VK ++ KGFGFI +D+F H + +Q T G V F++ +G G Sbjct: 1 MKKAGQVKTWHADKGFGFIDVYADMKDVFFHVTALQTRAV-TPTPGDRVSFELGKGKDGR 59 Query: 60 -HASVIVPVEVEAAVA 74 A + V + + Sbjct: 60 IQALNVAIVGAPKSRS 75 >UniRef50_D0Z9M8 Cold shock-like protein n=3 Tax=Enterobacteriaceae RepID=D0Z9M8_EDWTE Length = 69 Score = 68.7 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 36/66 (54%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 ++ G VKW++ + G G I P GG+D++ + + I + L+ GQ V+F +G + Sbjct: 3 LKMGFVKWYDPSAGLGVISPLDGGDDLYVNRTGIASARNKLLREGQRVEFSTPRGRRSQM 62 Query: 61 ASVIVP 66 A ++ Sbjct: 63 AEDVIA 68 >UniRef50_A2SHE7 Cold-shock DNA-binding domain n=2 Tax=Betaproteobacteria RepID=A2SHE7_METPP Length = 203 Score = 68.7 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG-NHAS 62 G +K +N+ +GFGFI P GG+DIF H G GQ+V F+V GP G A Sbjct: 5 GKLKSWNDERGFGFIDPVHGGQDIFVHIKAFPS-GTGRPTVGQAVTFEVELGPNGKKRAR 63 Query: 63 VIV 65 + Sbjct: 64 SVQ 66 >UniRef50_Q28PH1 Cold-shock DNA-binding protein family n=11 Tax=Rhodobacterales RepID=Q28PH1_JANSC Length = 181 Score = 68.3 bits (166), Expect = 8e-11, Method: Composition-based stats. Identities = 24/65 (36%), Positives = 36/65 (55%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ AKGFGF G ED+F H ++ G+ L+ G++V V GP+G A+ + Sbjct: 116 RVKWFDKAKGFGFANVFGHSEDVFVHVEVLRRSGFTELQPGEAVAMKVVDGPRGRMAAEV 175 Query: 65 VPVEV 69 + Sbjct: 176 RTWDA 180 Score = 64.4 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G VKWF+ KGFGF+ + GG DI H + ++ G ++ G V +G A Sbjct: 24 GVVKWFDTTKGFGFVLSDEGGPDILLHANVLRSFGRGSIAEGARVMLRTQATGRGLQAVE 83 Query: 64 IVPVEV 69 I+ +E Sbjct: 84 IIAIEA 89 >UniRef50_Q013V8 Glycogen debranching enzyme (ISS) n=1 Tax=Ostreococcus tauri RepID=Q013V8_OSTTA Length = 141 Score = 68.3 bits (166), Expect = 8e-11, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Query: 6 VKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA------GQSVQFDVHQGPKGN 59 V WFN +G+G++ P G ED+F H S +QMDG+R++ G ++F++ + Sbjct: 44 VTWFNCVRGYGYVRPHDGSEDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDER-R 102 Query: 60 HASVIVPVEVEA 71 A + Sbjct: 103 RAKNVTGPAGAP 114 >UniRef50_C0Z2E8 AT4G38680 protein n=103 Tax=cellular organisms RepID=C0Z2E8_ARATH Length = 204 Score = 68.3 bits (166), Expect = 8e-11, Method: Composition-based stats. Identities = 23/41 (56%), Positives = 33/41 (80%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTL 42 KG+VKWF+ KGFGFI P+ GG+D+F H S+I+ +G+R+L Sbjct: 11 RKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSL 51 >UniRef50_B4RAZ9 Cold-shock DNA-binding domain protein n=6 Tax=Caulobacteraceae RepID=B4RAZ9_PHEZH Length = 202 Score = 67.9 bits (165), Expect = 8e-11, Method: Composition-based stats. Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGE----DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 G VKWF+ KG+GFI P+ + D+ H ++++ G G + DV + PKG Sbjct: 28 TGRVKWFDAGKGYGFIVPDDPAQTDLKDVLLHVTSLRSSGREHCLEGSLITCDVVRRPKG 87 Query: 59 NHASVIVPVEVEAA 72 + +V ++ A Sbjct: 88 WQVAEVVDLDESTA 101 Score = 66.4 bits (161), Expect = 3e-10, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 37/64 (57%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN AKG+GF+ + DIF H T++ G L+ G++V +GPKG Sbjct: 133 LEQAKVKWFNRAKGYGFVIRDSQPGDIFVHIETLRRSGMEDLQPGENVMVRFAEGPKGLV 192 Query: 61 ASVI 64 + I Sbjct: 193 VAEI 196 >UniRef50_D0LBW3 Cold-shock protein DNA-binding protein n=2 Tax=Corynebacterineae RepID=D0LBW3_GORB4 Length = 164 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G V ++ +GFGF+ PE GG D+F H + I +D +LK G V FDV + +G A Sbjct: 8 SGKVVHYDTNRGFGFLAPESGGADVFLHINDIDIDE-SSLKPGAKVSFDVEETDRGAKAV 66 Query: 63 VIVPVEVEAA 72 + E A Sbjct: 67 NVAVTEEAPA 76 >UniRef50_B7RPT8 Cold shock protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RPT8_9RHOB Length = 182 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 36/65 (55%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 G VKWF+ AKGFGF+ + GG DI H + ++ G ++ G ++ H+ +G A+ Sbjct: 12 TGLVKWFDPAKGFGFVVSDEGGPDILLHVNVLRNYGQSSVADGARIELTAHETQRGVQAT 71 Query: 63 VIVPV 67 + + Sbjct: 72 QVHAI 76 Score = 62.1 bits (150), Expect = 6e-09, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 35/67 (52%) Query: 5 TVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI 64 VKWF+ +KGFGF G +DIF H ++ G L+ G+++ V G +G+ A+ + Sbjct: 107 RVKWFDKSKGFGFANVFGRSDDIFLHIEVLRQSGLSDLQPGEALALRVIMGERGHMAAEV 166 Query: 65 VPVEVEA 71 E Sbjct: 167 HAWETVT 173 >UniRef50_C6XG83 Cold shock protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG83_LIBAP Length = 78 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Query: 3 KGTVKWFNNAKGFGFICPEGG---GEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGP-KG 58 +G++KW+N KG+GFI PEG G+D+F H S + G L GQ V +D Q G Sbjct: 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG 63 Query: 59 N-HASVIVPVEVEA 71 A + V + Sbjct: 64 KYSAENLKLVPKSS 77 >UniRef50_A3J0H8 Cold shock protein n=2 Tax=Bacteroidetes RepID=A3J0H8_9FLAO Length = 148 Score = 67.9 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 GT+ +FN++KGFGFI GE F H S + D +K G V +D+ +G KG +A Sbjct: 89 GTIDFFNDSKGFGFIKAVETGEKYFVHISGLLDD----VKEGNLVTYDLEKGAKGMNAVN 144 Query: 64 IVPV 67 + + Sbjct: 145 VKKI 148 >UniRef50_C7LWH7 Cold-shock DNA-binding domain protein n=2 Tax=Proteobacteria RepID=C7LWH7_DESBD Length = 168 Score = 67.9 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVH-QGPKGNHA 61 G + + + +GFGFI P GGG +F H S +Q R +AG+ V ++V G KG A Sbjct: 4 HGEISEWRDDRGFGFITPTGGGTRVFVHISALQKG--RRPRAGEMVTYEVGNSGDKGPRA 61 Query: 62 SVI 64 + Sbjct: 62 LNV 64 >UniRef50_Q9XTJ6 Protein Y39A1C.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q9XTJ6_CAEEL Length = 294 Score = 67.5 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%) Query: 3 KGTVKWFNNAKGFGFICPE---GGGEDIFAHYSTIQMDG-----YRTLKAGQSVQFDVHQ 54 KG VKWF+ +GF+ + ED F H + I RTL + V FD+ + Sbjct: 90 KGHVKWFSVRGRYGFVARDKPTDENEDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVE 149 Query: 55 GPKGNHASVIVPVEVE 70 G KG A+ + + E Sbjct: 150 GLKGPEAANVTGPDGE 165 >UniRef50_C7PR46 Cold-shock DNA-binding domain protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PR46_CHIPD Length = 147 Score = 67.5 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G V +FN +KGFGFI + E +F H + + +K V F +GP+G +A Sbjct: 82 RTGVVSFFNLSKGFGFINDDSSKESVFFHMNQLAH----PVKEKDRVSFLREKGPRGFNA 137 Query: 62 SVIVPVEVE 70 + + Sbjct: 138 INVTKITSA 146 >UniRef50_C6C161 Cold-shock DNA-binding domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C161_DESAD Length = 69 Score = 67.5 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHAS 62 KG V WFN+ KGFGFI + G DI+ HYS + DG++TL G+ V F+V A+ Sbjct: 4 KGVVSWFNDIKGFGFIV-DEAGRDIYVHYSEVLRDGFKTLNVGEKVVFEVIDEDTAPKAT 62 Query: 63 VIVPV 67 + + Sbjct: 63 AVRII 67 >UniRef50_Q5YWN3 Putative cold shock protein n=1 Tax=Nocardia farcinica RepID=Q5YWN3_NOCFA Length = 130 Score = 67.1 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 4 GTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASV 63 G + F++++GFGFI PE GG D+F H + I L+ G+ +FDV +G +G A Sbjct: 6 GKLVSFDSSRGFGFIRPEDGGPDVFVHVNDI-GLDEDELRQGRVFEFDVTEGDRGPKAIN 64 Query: 64 IVPV 67 + V Sbjct: 65 LSAV 68 >UniRef50_D2RAW4 Cold-shock DNA-binding domain protein n=2 Tax=Bifidobacteriaceae RepID=D2RAW4_GARVA Length = 129 Score = 67.1 bits (163), Expect = 1e-10, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 M G V+W++ KG+GFI + G +D+F + + + ++L G V+F V +G KG Sbjct: 1 MPNGRVRWYDTQKGYGFIVGDDG-KDVFLPAAALPVT-VKSLHKGTRVEFSVIEGRKGPQ 58 Query: 61 A 61 A Sbjct: 59 A 59 >UniRef50_Q2RWM8 Cold-shock DNA-binding protein family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RWM8_RHORT Length = 68 Score = 67.1 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 31/58 (53%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 M GT+ WF+ G+GFI P+ GG DI + G R+L+ GQ V + + + G Sbjct: 1 MLTGTITWFDTINGYGFIRPDDGGGDIAVDMPALDRSGLRSLRDGQRVAYRLTRPRFG 58 >UniRef50_A1UT19 Cold-shock DNA-binding family protein n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT19_BARBK Length = 179 Score = 67.1 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%) Query: 3 KGTVKWFNNAKGFGFICPEGGG-EDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 G +KWF+++KG+GF+ P+ DI H S +Q DG++T G V V + +G Sbjct: 15 TGIIKWFDSSKGYGFVTPDFPKLPDILLHISVMQRDGFQTALEGAKVVCSVKKTKRGLKC 74 Query: 62 SVIVPVEVEAAV 73 + +++ +AV Sbjct: 75 IQVKSIDLSSAV 86 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 37/66 (56%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 +E+ VKWFN KGFGF+ G EDIF H T++ G L+AGQ V +G KG Sbjct: 105 LERAIVKWFNRDKGFGFLSRGQGTEDIFIHMETLRRFGLTELRAGQVVIVRFGKGEKGLM 164 Query: 61 ASVIVP 66 + I P Sbjct: 165 TAEIYP 170 >UniRef50_C8WUZ1 Cold-shock DNA-binding domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUZ1_ALIAD Length = 120 Score = 67.1 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 11/79 (13%) Query: 1 MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMD------GYRTLKAGQSVQFDVHQ 54 M +G VK + + +GFG+I E G ED++ H+S I GYR L+ GQ V+FD+ Sbjct: 1 MVEGIVKEWRDEEGFGWIRAEDG-EDVWVHFSAILPHPDRFPRGYRFLRKGQLVEFDLVT 59 Query: 55 GPKG----NHASVIVPVEV 69 P A +V + Sbjct: 60 NPHSAEQRRSARNVVVKDA 78 >UniRef50_B0T0Q8 Cold-shock DNA-binding domain protein n=2 Tax=Caulobacteraceae RepID=B0T0Q8_CAUSK Length = 201 Score = 66.8 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 35/68 (51%) Query: 2 EKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHA 61 E+ VKWFN KG+GF+ +G DIF H T++ G L+ G V +GPKG Sbjct: 134 ERAKVKWFNRTKGYGFVVRDGQPGDIFVHIETLRRGGLEDLQPGDDVMVRFAEGPKGLVV 193 Query: 62 SVIVPVEV 69 + I E Sbjct: 194 AEITSGED 201 Score = 65.6 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%) Query: 3 KGTVKWFNNAKGFGFICPEGGGE----DIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58 G VKWF+ KG+GFI P+ G+ D+ H ++++ G T G + DV + PKG Sbjct: 19 SGRVKWFDTGKGYGFIVPDDPGQTGLKDVLLHVTSLRNCGRETALEGAVIVCDVVKRPKG 78 Query: 59 NHASVIVPVEVEAA 72 S +V ++ AA Sbjct: 79 WQVSEVVDLDESAA 92 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.160 0.493 Lambda K H 0.267 0.0494 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 576,680,286 Number of Sequences: 3077464 Number of extensions: 24363897 Number of successful extensions: 53699 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1086 Number of HSP's successfully gapped in prelim test: 276 Number of HSP's that attempted gapping in prelim test: 51574 Number of HSP's gapped (non-prelim): 1647 length of query: 74 length of database: 1,040,396,356 effective HSP length: 45 effective length of query: 29 effective length of database: 901,910,476 effective search space: 26155403804 effective search space used: 26155403804 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.2 bits)