Phyre 2 Results for Q46896

Email | l.a.kelley@imperial.ac.uk
Description | Q46896
Date | Thu Jan 5 12:35:36 GMT 2012
Unique Job ID | be002e84e4cf9d7f

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3nkdB_ |
|  | 100.0 | 99 | PDB header:immune system Chain: B: PDB Molecule:crispr-associated protein cas1; PDBTitle: structure of crisp-associated protein cas1 from escherichia coli str.2 k-12
2 | c3godA_ |
|  | 100.0 | 25 | PDB header:immune system Chain: A: PDB Molecule:cas1; PDBTitle: structural basis for dnase activity of a conserved protein2 implicated in crispr-mediated antiviral defense
3 | c3lfxE_ |
|  | 100.0 | 18 | PDB header:structural genomics, unknown function Chain: E: PDB Molecule:uncharacterized protein; PDBTitle: structure of tm1797, a cas1 protein from thermotoga maritima
4 | c2yzsB_ |
|  | 100.0 | 17 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 aquifex aeolicus
5 | c3pv9D_ |
|  | 100.0 | 17 | PDB header:immune system Chain: D: PDB Molecule:putative uncharacterized protein ph1245; PDBTitle: structure of ph1245, a cas1 from pyrococcus horikoshii
6 | c3nkeA_ |
|  | 100.0 | 99 | PDB header:immune system Chain: A: PDB Molecule:protein ygbt; PDBTitle: high resolution structure of the c-terminal domain crisp-associated2 protein cas1 from escherichia coli str. k-12
7 | d1p3da1 |
|  | 73.8 | 3 | Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain
8 | d2jfga1 |
|  | 71.5 | 26 | Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain
9 | d1j6ua1 |
|  | 63.4 | 10 | Fold:MurCD N-terminal domain Superfamily:MurCD N-terminal domain Family:MurCD N-terminal domain
10 | d2ioja1 |
|  | 48.3 | 13 | Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:DRTGG domain
11 | c1jrxA_ |
|  | 42.1 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c; PDBTitle: crystal structure of arg402ala mutant flavocytochrome c32 from shewanella frigidimarina
12 | c3nixF_ |
|  | 39.1 | 20 | PDB header:oxidoreductase Chain: F: PDB Molecule:flavoprotein/dehydrogenase; PDBTitle: crystal structure of flavoprotein/dehydrogenase from cytophaga2 hutchinsonii. northeast structural genomics consortium target chr43.
13 | c2hbpA_ |
|  | 37.0 | 13 | PDB header:endocytosis, protein binding Chain: A: PDB Molecule:cytoskeleton assembly control protein sla1; PDBTitle: solution structure of sla1 homology domain 1
14 | c3lhlA_ |
|  | 33.6 | 7 | PDB header:hydrolase Chain: A: PDB Molecule:putative agmatinase; PDBTitle: crystal structure of a putative agmatinase from clostridium difficile
15 | c1qo8A_ |
|  | 33.3 | 19 | PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c3 fumarate reductase; PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase
16 | c2aczA_ |
|  | 27.2 | 18 | PDB header:oxidoreductase/electron transport Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with atpenin a52 inhibitor co-crystallized at the ubiquinone binding site
17 | c2f00A_ |
|  | 26.7 | 6 | PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc
18 | d1woha_ |
|  | 26.6 | 19 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
19 | c3mlqH_ |
|  | 22.8 | 20 | PDB header:transferase/transcription Chain: H: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain
20 | c1yq4A_ |
|  | 21.6 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: avian respiratory complex ii with 3-nitropropionate and ubiquinone
21 | c3nipB_ |
| not modelled | 20.6 | 10 | PDB header:hydrolase Chain: B: PDB Molecule:3-guanidinopropionase; PDBTitle: crystal structure of pseudomonas aeruginosa guanidinopropionase2 complexed with 1,6-diaminohexane
22 | c3m1rF_ |
| not modelled | 20.1 | 17 | PDB header:hydrolase Chain: F: PDB Molecule:formimidoylglutamase; PDBTitle: the crystal structure of formimidoylglutamase from bacillus2 subtilis subsp. subtilis str. 168
23 | c3ff4A_ |
| not modelled | 19.8 | 8 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412
24 | d1neka2 |
| not modelled | 19.6 | 18 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
25 | d2aeba1 |
| not modelled | 19.6 | 13 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
26 | d1xfka_ |
| not modelled | 18.5 | 23 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
27 | d2d59a1 |
| not modelled | 18.5 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
28 | d1gq6a_ |
| not modelled | 18.4 | 23 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
29 | c1jqoA_ |
| not modelled | 18.3 | 20 | PDB header:lyase Chain: A: PDB Molecule:phosphoenolpyruvate carboxylase; PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize
30 | d1jqoa_ |
| not modelled | 18.3 | 20 | Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate carboxylase
31 | d1pq3a_ |
| not modelled | 17.6 | 17 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
32 | d1zhva2 |
| not modelled | 17.2 | 11 | Fold:Ferredoxin-like Superfamily:ACT-like Family:Atu0741-like
33 | c1d4cB_ |
| not modelled | 16.6 | 13 | PDB header:oxidoreductase Chain: B: PDB Molecule:flavocytochrome c fumarate reductase; PDBTitle: crystal structure of the uncomplexed form of the2 flavocytochrome c fumarate reductase of shewanella3 putrefaciens strain mr-1
34 | c2cunA_ |
| not modelled | 16.5 | 13 | PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from pyrococcus2 horikoshii ot3
35 | c3bioB_ |
| not modelled | 15.5 | 13 | PDB header:oxidoreductase Chain: B: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of oxidoreductase (gfo/idh/moca family member) from2 porphyromonas gingivalis w83
36 | c1j6uA_ |
| not modelled | 15.0 | 9 | PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution
37 | c3ihgA_ |
| not modelled | 15.0 | 21 | PDB header:flavoprotein, oxidoreductase Chain: A: PDB Molecule:rdme; PDBTitle: crystal structure of a ternary complex of aklavinone-112 hydroxylase with fad and aklavinone
38 | c2e1mA_ |
| not modelled | 15.0 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:l-glutamate oxidase; PDBTitle: crystal structure of l-glutamate oxidase from streptomyces sp. x-119-6
39 | d2q4qa1 |
| not modelled | 14.3 | 16 | Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like
40 | d1w4xa1 |
| not modelled | 13.8 | 22 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD/NAD-linked reductases, N-terminal and central domains
41 | d1cr6a2 |
| not modelled | 13.7 | 16 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Epoxide hydrolase
42 | d2a0ma1 |
| not modelled | 13.3 | 13 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
43 | d1vpea_ |
| not modelled | 13.0 | 15 | Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase
44 | d1ko7a1 |
| not modelled | 12.9 | 15 | Fold:MurF and HprK N-domain-like Superfamily:HprK N-terminal domain-like Family:HPr kinase/phoshatase HprK N-terminal domain
45 | d2ceva_ |
| not modelled | 12.9 | 13 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
46 | d2ooxe2 |
| not modelled | 12.8 | 14 | Fold:CBS-domain pair Superfamily:CBS-domain pair Family:CBS-domain pair
47 | c3mlqE_ |
| not modelled | 12.8 | 26 | PDB header:transferase/transcription Chain: E: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain
48 | c2eivH_ |
| not modelled | 12.7 | 30 | PDB header:hydrolase Chain: H: PDB Molecule:arginase; PDBTitle: crystal structure of the arginase from thermus thermophilus
49 | d2fvta1 |
| not modelled | 12.6 | 13 | Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like
50 | c2kbrA_ |
| not modelled | 12.5 | 8 | PDB header:structural protein/cell adhesion Chain: A: PDB Molecule:harmonin; PDBTitle: solution structure of harmonin n terminal domain in complex2 with a internal peptide of cadherin23
51 | d1iuka_ |
| not modelled | 12.5 | 11 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
52 | d1v6sa_ |
| not modelled | 12.5 | 22 | Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase
53 | c2pd2A_ |
| not modelled | 12.1 | 9 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st0148; PDBTitle: crystal structure of (st0148) conserved hypothetical from sulfolobus2 tokodaii strain7
54 | d1phpa_ |
| not modelled | 12.1 | 15 | Fold:Phosphoglycerate kinase Superfamily:Phosphoglycerate kinase Family:Phosphoglycerate kinase
55 | d1gsoa2 |
| not modelled | 12.0 | 10 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like
56 | d1ybha1 |
| not modelled | 12.0 | 9 | Fold:DHS-like NAD/FAD-binding domain Superfamily:DHS-like NAD/FAD-binding domain Family:Pyruvate oxidase and decarboxylase, middle domain
57 | d1zvpa2 |
| not modelled | 11.8 | 13 | Fold:Ferredoxin-like Superfamily:ACT-like Family:VC0802-like
58 | d1zd3a2 |
| not modelled | 11.7 | 19 | Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Epoxide hydrolase
59 | c3do5A_ |
| not modelled | 11.5 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution
60 | d1d3va_ |
| not modelled | 11.3 | 13 | Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases
61 | c3mmrA_ |
| not modelled | 11.1 | 13 | PDB header:hydrolase Chain: A: PDB Molecule:arginase; PDBTitle: structure of plasmodium falciparum arginase in complex with abh
62 | c3cpiH_ |
| not modelled | 11.1 | 14 | PDB header:protein transport Chain: H: PDB Molecule:rab gdp-dissociation inhibitor; PDBTitle: crystal structure of yeast rab-gdi
63 | c2qa2A_ |
| not modelled | 10.9 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:polyketide oxygenase cabe; PDBTitle: crystal structure of cabe, an aromatic hydroxylase from angucycline2 biosynthesis, determined to 2.7 a resolution
64 | c1zmrA_ |
| not modelled | 10.9 | 20 | PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of the e. coli phosphoglycerate kinase
65 | c1s1hB_ |
| not modelled | 10.8 | 12 | PDB header:ribosome Chain: B: PDB Molecule:40s ribosomal protein s0-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
66 | c2duwA_ |
| not modelled | 10.7 | 11 | PDB header:ligand binding protein Chain: A: PDB Molecule:putative coa-binding protein; PDBTitle: solution structure of putative coa-binding protein of2 klebsiella pneumoniae
67 | d2eyqa1 |
| not modelled | 10.6 | 20 | Fold:SH3-like barrel Superfamily:CarD-like Family:CarD-like
68 | d2gf3a1 |
| not modelled | 10.4 | 18 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
69 | c2dkhA_ |
| not modelled | 10.4 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxybenzoate hydroxylase; PDBTitle: crystal structure of 3-hydroxybenzoate hydroxylase from comamonas2 testosteroni, in complex with the substrate
70 | d2fi9a1 |
| not modelled | 10.2 | 9 | Fold:MTH938-like Superfamily:MTH938-like Family:MTH938-like
71 | c3pzlA_ |
| not modelled | 10.1 | 27 | PDB header:hydrolase Chain: A: PDB Molecule:agmatine ureohydrolase; PDBTitle: the crystal structure of agmatine ureohydrolase of thermoplasma2 volcanium
72 | d2nmla1 |
| not modelled | 10.1 | 24 | Fold:ERH-like Superfamily:ERH-like Family:ERH-like
73 | c3q3vA_ |
| not modelled | 9.8 | 14 | PDB header:transferase Chain: A: PDB Molecule:phosphoglycerate kinase; PDBTitle: crystal structure of phosphoglycerate kinase from campylobacter2 jejuni.
74 | c2r4jA_ |
| not modelled | 9.8 | 17 | PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap
75 | c3fwzA_ |
| not modelled | 9.7 | 16 | PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli
76 | c3nioF_ |
| not modelled | 9.6 | 21 | PDB header:hydrolase Chain: F: PDB Molecule:guanidinobutyrase; PDBTitle: crystal structure of pseudomonas aeruginosa guanidinobutyrase
77 | d1otha2 |
| not modelled | 9.5 | 19 | Fold:ATC-like Superfamily:Aspartate/ornithine carbamoyltransferase Family:Aspartate/ornithine carbamoyltransferase
78 | d2bcgg1 |
| not modelled | 9.2 | 14 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:GDI-like N domain
79 | d1euca1 |
| not modelled | 9.1 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
80 | c2yg4B_ |
| not modelled | 9.0 | 13 | PDB header:oxidoreductase Chain: B: PDB Molecule:putrescine oxidase; PDBTitle: structure-based redesign of cofactor binding in putrescine2 oxidase: wild type bound to putrescine
81 | c1oy5B_ |
| not modelled | 8.7 | 16 | PDB header:transferase Chain: B: PDB Molecule:trna (guanine-n(1)-)-methyltransferase; PDBTitle: crystal structure of trna (m1g37) methyltransferase from aquifex2 aeolicus
82 | d1oy5a_ |
| not modelled | 8.7 | 16 | Fold:alpha/beta knot Superfamily:alpha/beta knot Family:tRNA(m1G37)-methyltransferase TrmD
83 | c3mpoD_ |
| not modelled | 8.7 | 24 | PDB header:hydrolase Chain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis
84 | c2rgoA_ |
| not modelled | 8.6 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
85 | d1y81a1 |
| not modelled | 8.5 | 17 | Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:CoA-binding domain
86 | c2p58A_ |
| not modelled | 8.4 | 15 | PDB header:transport protein/chaperone Chain: A: PDB Molecule:putative type iii secretion protein ysce; PDBTitle: structure of the yersinia pestis type iii secretion system2 needle protein yscf in complex with its chaperones3 ysce/yscg
87 | c3fmwC_ |
| not modelled | 8.3 | 9 | PDB header:oxidoreductase Chain: C: PDB Molecule:oxygenase; PDBTitle: the crystal structure of mtmoiv, a baeyer-villiger2 monooxygenase from the mithramycin biosynthetic pathway in3 streptomyces argillaceus.
88 | d2ozga1 |
| not modelled | 8.3 | 13 | Fold:SCP-like Superfamily:SCP-like Family:EF1021 C-terminal domain-like
89 | c3nyeA_ |
| not modelled | 8.3 | 14 | PDB header:oxidoreductase Chain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine
90 | d1zcza2 |
| not modelled | 8.2 | 12 | Fold:Cytidine deaminase-like Superfamily:Cytidine deaminase-like Family:AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
91 | c1zvpB_ |
| not modelled | 8.1 | 13 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein vc0802; PDBTitle: crystal structure of a protein of unknown function vc0802 from vibrio2 cholerae, possible transport protein
92 | c2l2qA_ |
| not modelled | 8.1 | 15 | PDB header:transferase Chain: A: PDB Molecule:pts system, cellobiose-specific iib component (cela); PDBTitle: solution structure of cellobiose-specific phosphotransferase iib2 component protein from borrelia burgdorferi
93 | d3coxa1 |
| not modelled | 8.1 | 26 | Fold:FAD/NAD(P)-binding domain Superfamily:FAD/NAD(P)-binding domain Family:FAD-linked reductases, N-terminal domain
94 | c2d6fA_ |
| not modelled | 7.9 | 20 | PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
95 | d1rlga_ |
| not modelled | 7.9 | 9 | Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:L30e/L7ae ribosomal proteins
96 | d2cvza1 |
| not modelled | 7.8 | 22 | Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
97 | d2npta1 |
| not modelled | 7.7 | 12 | Fold:beta-Grasp (ubiquitin-like) Superfamily:CAD & PB1 domains Family:PB1 domain
98 | c3l78A_ |
| not modelled | 7.6 | 9 | PDB header:transcription Chain: A: PDB Molecule:regulatory protein spx; PDBTitle: the crystal structure of smu.1142c from streptococcus mutans ua159
99 | c3nbmA_ |
| not modelled | 7.5 | 24 | PDB header:transferase Chain: A: PDB Molecule:pts system, lactose-specific iibc components; PDBTitle: the lactose-specific iib component domain structure of the2 phosphoenolpyruvate:carbohydrate phosphotransferase system (pts) from3 streptococcus pneumoniae.