Phyre 2 alignment of Q46896 with c3lhlA_

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Job Description | Q46896
Confidence | 33.61% | Date | Thu Jan 5 12:35:36 GMT 2012
Rank | 14 | Aligned Residues | 30
% Identity | 7% | Template | c3lhlA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:putative agmatinase; | PDBTitle: crystal structure of a putative agmatinase from clostridium difficile
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |  |  | . | . | . | . | . | . | . | . | 80 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | M | L | E | P | G | T | R | V | S | H | A | A | V | R | L | A | A | Q | V | . | . | G | T | L | L | V | W | V | G | E | A
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | X | I | G | G | E | H | L | V | T | L | P | A | F | K | A | V | H | E | K | Y | N | D | I | Y | V | I | H | F | D | A | H
Template Known Secondary structure |  |  |  |  |  | S | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | S | B
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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