Phyre 2 alignment of Q46896 with c2aczA_

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Job Description | Q46896
Confidence | 27.21% | Date | Thu Jan 5 12:35:36 GMT 2012
Rank | 16 | Aligned Residues | 39
% Identity | 18% | Template | c2aczA_
PDB info | PDB header:oxidoreductase/electron transport | Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; | PDBTitle: complex ii (succinate dehydrogenase) from e. coli with atpenin a52 inhibitor co-crystallized at the ubiquinone binding site
Resolution | 3.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | H | I | P | V | G | S | V | A | C | I | M | L | E | P | G | T | R | V | S | H | A | A | V | R | L | A | A | Q | V | G | T | L | L | V | W | V | G | E | A | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | L | P | V | R | E | F | D | A | V | V | I | G | A | G | G | A | G | M | R | A | A | L | Q | . | I | S | Q | S | G | Q | T | C | A | L | L | S | K | V | F
Template Known Secondary structure |  |  | S |  | B |  |  | B | S |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  | . |  |  |  | T | T |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . |  | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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