18/01/2012 02:33:28 : INFO  : Run start: Wed Jan 18 02:33:28 GMT 2012
18/01/2012 02:33:33 : INFO  : Initialised job
18/01/2012 02:33:34 : INFO  : Renaming log file 'phyre2_20120118_023327.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/be002e84e4cf9d7f/phyre_20120118_023327.log'
18/01/2012 02:33:35 : INFO  : Initialised job:
Sequence
>batch____
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRV
SHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMF
ELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCI
SAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNP
GEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDA
GHRSS

18/01/2012 02:33:36 : INFO  : Checked sequence
18/01/2012 02:33:39 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 02:33:40 : INFO  : PSI-BLAST 3 iterations
18/01/2012 02:35:12 : INFO  : PSI-BLAST 5 iterations
18/01/2012 02:36:51 : INFO  : Finished PSI-BLAST
18/01/2012 02:36:53 : INFO  : Running Buildali to generate a3m file
18/01/2012 02:43:05 : INFO  : Converting to HMM
18/01/2012 02:43:07 : INFO  : Calibrating HMM
18/01/2012 02:43:22 : INFO  : Searching HMM database
18/01/2012 02:50:19 : INFO  : Finished buildali
18/01/2012 02:50:21 : INFO  : Predicting secondary structure
18/01/2012 02:50:29 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 02:50:30 : INFO  : Predicting Disordered regions
18/01/2012 02:50:36 : INFO  : Predicted Disorder (Disopred)
18/01/2012 02:50:38 : INFO  : Running memsat_svm check
18/01/2012 02:52:38 : INFO  : Running memsat_svm full
18/01/2012 02:57:49 : INFO  : Predicted Transmembrane (memsat_svm) ID 'be002e84e4cf9d7f'
18/01/2012 02:57:51 : INFO  : Initialising fold library search
18/01/2012 02:57:55 : INFO  : Initialised search input
18/01/2012 02:57:57 : INFO  : Building Ensemble models
18/01/2012 02:58:01 : INFO  : Building hh.c3nkdB_.model.1.pdb
18/01/2012 02:58:17 : INFO  : Building c3nkdB_.1.pdb
18/01/2012 02:58:33 : INFO  : Building c3godA_.2.pdb
18/01/2012 02:58:50 : INFO  : Building c3lfxE_.3.pdb
18/01/2012 02:59:08 : INFO  : Building c2yzsB_.4.pdb
18/01/2012 02:59:26 : INFO  : Building c3pv9D_.5.pdb
18/01/2012 02:59:43 : INFO  : Building c3nkeA_.6.pdb
18/01/2012 02:59:57 : INFO  : Building d1p3da1.7.pdb
18/01/2012 03:00:12 : INFO  : Building d2jfga1.8.pdb
18/01/2012 03:00:27 : INFO  : Building d1j6ua1.9.pdb
18/01/2012 03:00:43 : INFO  : Building d2ioja1.10.pdb
18/01/2012 03:00:59 : INFO  : Building c1jrxA_.11.pdb
18/01/2012 03:01:17 : INFO  : Building c3nixF_.12.pdb
18/01/2012 03:01:34 : INFO  : Building c2hbpA_.13.pdb
18/01/2012 03:01:52 : INFO  : Building c3lhlA_.14.pdb
18/01/2012 03:02:06 : INFO  : Building c1qo8A_.15.pdb
18/01/2012 03:02:21 : INFO  : Building c2aczA_.16.pdb
18/01/2012 03:02:37 : INFO  : Building c2f00A_.17.pdb
18/01/2012 03:02:52 : INFO  : Building d1woha_.18.pdb
18/01/2012 03:03:08 : INFO  : Building c3mlqH_.19.pdb
18/01/2012 03:03:24 : INFO  : Building c1yq4A_.20.pdb
18/01/2012 03:04:00 : INFO  : Finished HH model building
18/01/2012 03:04:02 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 03:04:56 : INFO  : html domain output complete ID 'be002e84e4cf9d7f'
18/01/2012 03:22:11 : INFO  : Run end  : Wed Jan 18 03:22:10 GMT 2012
