12 c1ynpA_ Probab=100.00  E-value=0  Score=397.02  Aligned_columns=279  Identities=26%

Q ss_pred             CCCCCCCCCCCCEECHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCE
Q ss_conf             68511687988652521511121378988989999999999986998899742008874622899999999613788550
Q batch____        12 QMQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDE   91 (346)
Q Consensus        12 ~M~~r~lG~tg~~vs~lglG~~~~~~~~~~~~~~~~~l~~A~~~Gin~~DTA~~Yg~~~G~sE~~lG~aL~~~~~~~r~~   91 (346)
                      +|+||+||+||++||+||||||+++.   +++++.++|++|+++|||+||||+.||  +|.||+.+|+||    +..|..
T Consensus         1 ~M~~r~lG~tg~~vs~lglGt~~~g~---~~~~~~~~l~~A~~~Gin~fDTA~~Yg--~g~sE~~lG~~l----~~~~~~   71 (283)
T c1ynpA_           1 HMKKRQLGTSDLHVSELGFGCMSLGT---DETKARRIMDEVLELGINYLDTADLYN--QGLNEQFVGKAL----KGRRQD   71 (283)
T ss_dssp             CCCEEECTTSSCEEESBCBCSCCCCS---CHHHHHHHHHHHHHTTCCEEECSCBTT--BCCCHHHHHHHH----TTCGGG
T ss_pred             CCCCCCCCCCCCEECCEEEEECCCCC---CHHHHHHHHHHHHHCCCCEEECCCHHC--CCHHHHHHHHHH----HHCCCE
T ss_conf             97533476998653402072088987---889999999999986998899710318--984489999998----404876


Q ss_pred             EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCC
Q ss_conf             89953033577777676799989999999999998389864422012788878999999999999986680400345888
Q batch____        92 LIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYS  171 (346)
Q Consensus        92 v~i~TK~~~~~~~~~~~~~~s~~~i~~s~e~sL~~L~~d~iDl~~lh~~d~~~~~~~~~~al~~l~~~G~i~~iGvs~~~  171 (346)
                      +++.+|.             +++.++++++.||++|++||+|++++|+|+...+.++.+++|++|+++|++++||+|+++
T Consensus        72 ~~~~~~~-------------~~~~i~~~~e~sl~~L~~d~iDl~~lh~~~~~~~~~~~~~~l~~l~~~g~i~~iG~s~~~  138 (283)
T c1ynpA_          72 IILATKV-------------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIR  138 (283)
T ss_dssp             CEEEEEC-------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCC
T ss_pred             EEECCCC-------------CHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEECCCCCC
T ss_conf             9972675-------------379999999999997089843202100688788968899999999984304713147788


Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999998636953999722389022872168899999984988987210356300345468998663212233321
Q batch____       172 PERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKV  251 (346)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~q~~~nl~~~~~~~~~~~~~~~~~gi~v~a~~~l~~G~L~~~~~~~~~~~~~~~~~~~~~  251 (346)
                      ...+.++...+.     ++++|++||++++..+  ..+++|+++|+++++++|+++|.|++......+..          
T Consensus       139 ~~~~~~~~~~~~-----~~~~q~~~n~~~~~~~--~~l~~~~~~g~~~~~~~~l~~g~l~~~~~~~~~~~----------  201 (283)
T c1ynpA_         139 PNVIKEYLKRSN-----IVSIMMQYSILDRRPE--EWFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGY----------  201 (283)
T ss_dssp             HHHHHHHHHHSC-----CCEEEEECBTTBCGGG--GGHHHHHHTTCEEEEECTTGGGTTSSSCCCTTCCB----------
T ss_pred             HHHHHHHCCCCC-----CEEEEEEECCCCCCCH--HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC----------
T ss_conf             899998313357-----1288871036756747--88999998498279800023531247867675443----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             00111235855677879999999880999899999999958994499728999999999998753789898999999986
Q batch____       252 RGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQH  331 (346)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~l~~ia~~~g~t~~q~al~~~l~~~~v~~vi~G~~~~e~l~enl~al~~~~Lt~e~~~~l~~~  331 (346)
                               .........+..+|.++++|++|+||+|++++|.|++||+|+++++|++||++++...+||+|++++|+++
T Consensus       202 ---------~~~~~~~~~~~~~a~~~~~s~~q~al~~~l~~~~v~~vi~G~~~~~~l~enl~a~~~~~Lt~ee~~~i~~~  272 (283)
T c1ynpA_         202 ---------LNYRYDELKLLRESLPTDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKL  272 (283)
T ss_dssp             ---------TTBCHHHHHHHHHHSCSSSCHHHHHHHHHHTSTTEEEEECCCSSHHHHHHHHHHHTSCCCCHHHHHHHHHH
T ss_pred             ---------CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf             ---------21010138999999870999899999999848994099617999999999898619888898999999964


Q ss_pred             CCCCCCC
Q ss_conf             0345542
Q batch____       332 IADGELN  338 (346)
Q Consensus       332 ~~~~~~~  338 (346)
                      +...-++
T Consensus       273 ~~~~~~~  279 (283)
T c1ynpA_         273 AKAAVYE  279 (283)
T ss_dssp             SCCCCCC
T ss_pred             CCCCCCC
T ss_conf             1102467