17 c1vciA_ Probab=100.00  E-value=0  Score=354.25  Aligned_columns=281  Identities=21%

Q ss_pred             CCCCCCEEEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHH
Q ss_conf             99898459994579981988876445125788988999879998888999999478858710799868888778988898
Q batch____         1 MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAAL   80 (504)
Q Consensus         1 m~~~~p~i~~~~l~~~y~~~~~l~~is~~i~~Ge~~~liG~nGsGKSTll~~l~G~~~~~~G~i~~~G~~~~~~~~~~~~   80 (504)
                      |++++  |+++|++++|++.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...++..  
T Consensus         2 ~~M~~--i~~~~l~~~y~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~--   77 (353)
T c1vciA_           2 IKMVE--VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKD--   77 (353)
T ss_dssp             CCCCC--EEEEEEEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGG--
T ss_pred             CEEEE--EEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHH--
T ss_conf             32108--99941899848889863232468899789998799988889999996687476007998888874578323--


Q ss_pred             HCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHC
Q ss_conf             47937980542228677399988733431124588989999999999997588411278558889899999999998864
Q batch____        81 NAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR  160 (504)
Q Consensus        81 ~~~i~~v~Q~~~l~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Ge~qri~ia~al~~  160 (504)
                       ..++++||      .+++.+|+.+.     ...........++.+.++.++++...++++.+|||||+||++||+|++.
T Consensus        78 -~~~~~~~~------~~~~~~n~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~  145 (353)
T c1vciA_          78 -RNISMVFQ------HMTVYENIAFP-----LKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVV  145 (353)
T ss_dssp             -TTEEEECC------CCCHHHHHHTT-----CCCCCHHHHHHHHHHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTT
T ss_pred             -CEEECCCC------CCEEEECCCCC-----CHHHHHHHCCHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCC
T ss_conf             -02202333------20000012112-----1000011000025787631385101102520357661576888898507


Q ss_pred             CCCEEEECCCCCCCCHHHHHHHHHHHHHH-HHCCCEEEEEECCHHHHHHHHHHHCCCCCCCEECCCCHHHHHHH--HHHC
Q ss_conf             99599975831268999999999999999-75088599992576798998764020567215012787999875--4201
Q batch____       161 NAKIIAFDEPTSSLSAREIDNLFRVIREL-RKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDH--DALV  237 (504)
Q Consensus       161 ~p~illLDEpt~~LD~~~~~~l~~~i~~l-~~~g~til~v~H~~~~~~~~~dri~~l~~G~~~~~~~~~~~~~~--~~l~  237 (504)
                      +|++|||||||++||+..+..+++.|+++ ++.|+|+|++||+++++..+||||++|++|+++..+++.+.+.+  ....
T Consensus       146 ~p~llllDEP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G~i~~~g~~~ei~~~p~~~~~  225 (353)
T c1vciA_         146 EPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFV  225 (353)
T ss_dssp             CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSBHHH
T ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHH
T ss_conf             86599995610198889999999999999997398246773057888864488999104757254598899737898227


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCEEEECCCEEEEEEEEEEEECCCCCCHHHH
Q ss_conf             2222222222221112222333------322222332045216730344443678851553310135
Q batch____       238 QAMVGRDIGDIYGWQPRSYGEE------RLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSEL  298 (504)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~------~l~~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGaGKsTL  298 (504)
                      ..+.+.......+.........      .+..........-..+.+.+++ |.+.+.+.++.++.++
T Consensus       226 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~IRP-E~i~l~~~~~~~~~~l  291 (353)
T c1vciA_         226 ATFIGAPEMNILEVSVGDGYLEGRGFRIELPQMDLLKDYVGKTVLFGIRP-EHMTVEGVHMKRTARL  291 (353)
T ss_dssp             HHHSSSSCCEEEEEEECSSEEEETTEEEECCCCCTTGGGBTSEEEEEECG-GGEEESCCCCSSEEEE
T ss_pred             HHHCCCCCCCEEEEEEECCEEEECCEEEECCCCCCCCCCCCCEEEEEECC-CCEEECCCCCCCCCEE
T ss_conf             87508877524658960773853431888035555666799759999940-0159812787776349