BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (739 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7MJL8 UPF0313 protein VV2143 n=280 Tax=root RepID=Y214... 997 0.0 UniRef50_A1W831 Radical SAM N-terminal domain protein n=58 Tax=c... 929 0.0 UniRef50_Q128Y3 Radical SAM n=6 Tax=Bacteria RepID=Q128Y3_POLSJ 921 0.0 UniRef50_P61405 UPF0313 protein RPA0679 n=29 Tax=Bacteria RepID=... 882 0.0 UniRef50_Q08XF0 Radical SAM n=3 Tax=Bacteria RepID=Q08XF0_STIAU 693 0.0 UniRef50_D2QYA0 Radical SAM domain protein n=1 Tax=Pirellula sta... 662 0.0 UniRef50_A7H6E2 Radical SAM domain protein n=4 Tax=Anaeromyxobac... 587 e-166 UniRef50_P61404 UPF0313 protein GSU2873 n=8 Tax=Proteobacteria R... 585 e-165 UniRef50_Q8THA2 UPF0313 protein MA_4618 n=6 Tax=Archaea RepID=Y4... 556 e-157 UniRef50_Q0STL9 UPF0313 protein CPR_1216 n=60 Tax=cellular organ... 547 e-154 UniRef50_A1ALG7 UPF0313 protein Ppro_0556 n=9 Tax=Desulfuromonad... 538 e-151 UniRef50_C9KPY8 Radical SAM domain protein n=1 Tax=Mitsuokella m... 526 e-147 UniRef50_D1P9M1 Radical SAM domain protein n=1 Tax=Prevotella co... 525 e-147 UniRef50_B0VIP9 Radical SAM domain protein n=1 Tax=Candidatus Cl... 520 e-146 UniRef50_C9MQP2 Radical SAM domain protein n=4 Tax=Prevotella Re... 520 e-145 UniRef50_C9RQ46 Radical SAM domain protein n=28 Tax=Bacteria Rep... 505 e-141 UniRef50_Q7MVU9 UPF0313 protein PG_0934 n=25 Tax=Bacteria RepID=... 504 e-141 UniRef50_A7IB47 Radical SAM N-terminal domain protein n=7 Tax=ce... 501 e-140 UniRef50_A9KIV0 Radical SAM domain protein n=5 Tax=Clostridiales... 501 e-140 UniRef50_C7N5G2 Fe-S oxidoreductase n=54 Tax=cellular organisms ... 499 e-139 UniRef50_D1N9W5 Radical SAM domain protein n=1 Tax=Victivallis v... 483 e-134 UniRef50_B5YAS7 Radical SAM n=2 Tax=Dictyoglomus RepID=B5YAS7_DICT6 477 e-133 UniRef50_C7LQA1 Radical SAM domain protein n=1 Tax=Desulfomicrob... 476 e-132 UniRef50_Q58555 UPF0313 protein MJ1155 n=4 Tax=Methanocaldococcu... 473 e-131 UniRef50_A5IK80 UPF0313 protein Tpet_0582 n=10 Tax=Thermotogacea... 452 e-125 UniRef50_B8DSG7 Radical SAM domain protein n=1 Tax=Desulfovibrio... 449 e-124 UniRef50_Q729D8 Radical SAM domain protein n=12 Tax=Proteobacter... 444 e-123 UniRef50_C8QZ53 Radical SAM domain protein n=5 Tax=Deltaproteoba... 432 e-119 UniRef50_B8J3X2 Radical SAM domain protein n=1 Tax=Desulfovibrio... 431 e-119 UniRef50_D1TTB0 Conserved domain protein n=10 Tax=Yersinia RepID... 360 1e-97 UniRef50_Q3XWG2 Putative uncharacterized protein n=1 Tax=Enteroc... 332 2e-89 UniRef50_B0TIH7 Radical sam protein, putative n=1 Tax=Heliobacte... 306 3e-81 UniRef50_D1J9C3 Putative uncharacterized protein n=1 Tax=uncultu... 292 3e-77 UniRef50_Q8R682 UPF0313 protein FN0734 n=26 Tax=Bacteria RepID=Y... 270 1e-70 UniRef50_UPI0001910DF7 hypothetical protein Salmonellaentericaen... 199 5e-49 UniRef50_D2YQ88 UPF0313 protein n=1 Tax=Vibrio mimicus VM573 Rep... 149 5e-34 UniRef50_B9TGP5 Putative uncharacterized protein (Fragment) n=1 ... 88 9e-16 UniRef50_UPI0001C35963 hypothetical protein ChatD1_27829 n=1 Tax... 56 6e-06 UniRef50_A0LKA1 Radical SAM domain protein n=1 Tax=Syntrophobact... 43 0.047 UniRef50_B8D5M7 RNA modification enzyme, MiaB family n=1 Tax=Des... 42 0.060 >UniRef50_Q7MJL8 UPF0313 protein VV2143 n=280 Tax=root RepID=Y2143_VIBVY Length = 768 Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/730 (66%), Positives = 578/730 (79%), Gaps = 17/730 (2%) Query: 18 QYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRV 77 +YWA CFG APFLP SR+EMD LGWDSCDI+LVTGDAYVDHPSFGMAI GR+LEAQGFRV Sbjct: 13 KYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRV 72 Query: 78 GIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRP 137 GIIAQP W K DFM LGKPNLFFGVT+GNMDSMINRYT+DR+LRHDDAYTP+N GKRP Sbjct: 73 GIIAQPQWQDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDDAYTPNNEGGKRP 132 Query: 138 DRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNG 197 DRATLVY+QRC+EA+KDVP++LGGIEASLRR AHYDYWSD VRRSVL+D+KAD+L+FGN Sbjct: 133 DRATLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSVLLDAKADILLFGNA 192 Query: 198 ERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIP-HPYG 256 ER LVEVAHRLA GE I+++ ++R TA+ + G++ +DS+R++ P K IP +PY Sbjct: 193 ERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKPRKEAFIPPNPYE 252 Query: 257 EDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHH 316 + C + K PK A+ +T++P R T V LPSFEK++ D++LYAHASRILH Sbjct: 253 VETQC-ETKSEEPK---AQPITIRPSR-HDAATTAVRLPSFEKLQNDRILYAHASRILHL 307 Query: 317 ETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMI 376 ETNP RAL+Q+HG+R +W+N IPL+TEEMD VF LPY RVPHP YG A+IPAY+MI Sbjct: 308 ETNPYSGRALIQRHGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAKIPAYDMI 367 Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPT 436 + SVNIMRGCFGGCSFCSITEHEGRIIQ+RS++SI+ E+E IRD VPGFTG ISDLGGPT Sbjct: 368 KTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESILTELEEIRDKVPGFTGTISDLGGPT 427 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 ANMY L C P+AE CRR SCV+P IC ++T+H+ TI+LYR AR +KG+KK++IASGV Sbjct: 428 ANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKKVMIASGV 487 Query: 497 RYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ 556 RYD+A+E P Y+KEL THHVGGYLKIAPEHTE+GPL MMKPGMG+YDRFKE+FD YS++ Sbjct: 488 RYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFDKYSQE 547 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 AGK+QYLIPYFISAHPGT DEDM+NLALWLKK+ + DQVQNFYPSP+ N+T+MYY+ N Sbjct: 548 AGKKQYLIPYFISAHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATSMYYSETN 607 Query: 617 PLAKIGYKS-EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 PL ++ YK EDV V KGD+QRRLHKALLRYHDPANWPLIR+AL MGKK+LIG + CL Sbjct: 608 PLKRVKYKQREDVPVAKGDRQRRLHKALLRYHDPANWPLIREALITMGKKYLIGDKPGCL 667 Query: 676 VPAPTIEEMREARRQNRNTRPA---LTKHTPMATQRQTPATAKKASSTQSRPVNAG---- 728 VPA ++ A+R+ A TKHT +TQ P A S + +P G Sbjct: 668 VPAEDVDARTPAQRRKSGRHGANRFATKHT--STQPGFPGDKANAGSGK-KPTRGGQSNS 724 Query: 729 AKKRPKAAVG 738 A R +A G Sbjct: 725 APSRSGSATG 734 >UniRef50_A1W831 Radical SAM N-terminal domain protein n=58 Tax=cellular organisms RepID=A1W831_ACISJ Length = 847 Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/731 (61%), Positives = 553/731 (75%), Gaps = 49/731 (6%) Query: 13 LFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEA 72 L S+ YWA FG AP+LPMSR EM+QLGWDSCD++LVTGDAYVDHPSFGMA+ GR+LEA Sbjct: 17 LTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYVDHPSFGMAVIGRVLEA 76 Query: 73 QGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNV 132 QGFRVGIIAQPDW S D F LGKPNLF+GVTAGNMDSMINRYTADR++R DDAYTP +V Sbjct: 77 QGFRVGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPGDV 136 Query: 133 AGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADML 192 GKRPDRA +VY+QRC+EA+KDVP++LGGIE SLRR AHYDYWSD VRRS++VDSK D+L Sbjct: 137 GGKRPDRAAVVYSQRCREAYKDVPIVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCDIL 196 Query: 193 MFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIP 252 +FGN ER LVEVAHR+A +P+ I DVR TA + + + PGW +DST +D PG++D + Sbjct: 197 LFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFEIDSTEVDEPGRVDELI 256 Query: 253 HPY--------GEDLPC------------ADNKPVAPKK-QEAKAVTVQPPRPK------ 285 +PY + C AD + A +K + + P P Sbjct: 257 NPYMTTSEQAAAQGQTCSQEDAANSIAASADPQSAAGQKPLQTVQIVPNPALPSKGRSGR 316 Query: 286 ---PWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGD----RYVWIN 338 P E+T + LPS+E+VK D VLYAHA+R+LH ETNPG ARAL+Q HG+ R VW+N Sbjct: 317 ALPPRERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWLN 376 Query: 339 PPAIPLSTEEMDSVFALPYKRVPHPAY--------GNARIPAYEMIRFSVNIMRGCFGGC 390 PP +PL+T EMD VF LPY R PHP Y G +IPA+EMIR S+NIMRGCFGGC Sbjct: 377 PPPVPLTTAEMDWVFGLPYARNPHPQYLDAQGSYEGPTKIPAWEMIRASINIMRGCFGGC 436 Query: 391 SFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE 450 +FCSITEHEGRIIQSRSEDSII E+E IRD V GFTG ISDLGGPTANMY L CKSP E Sbjct: 437 TFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGGPTANMYRLGCKSPEIE 496 Query: 451 QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKE 510 CR+ SCV+P IC ++ T+H P +N+YRRAR L GIKKILI SG+RYD+AV+ P Y+KE Sbjct: 497 AACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGSGLRYDLAVKSPEYVKE 556 Query: 511 LATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISA 570 L HHVGGYLKIAPEHTE GPLSKMMKPG+G+YDRFK++F+ Y+++AGK+Q+LIPYFI+A Sbjct: 557 LVQHHVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTEEAGKKQFLIPYFIAA 616 Query: 571 HPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVF- 629 HPGT DEDM+NLA+WLKK+ FR DQVQ FYPSP+A++T MY++G+NPL ++ + DV Sbjct: 617 HPGTTDEDMLNLAIWLKKNGFRADQVQAFYPSPMASATAMYHSGRNPLTRVRRQMRDVAE 676 Query: 630 ----VPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PTIEE 683 V +G+K+RRLHKA LRYHDP NWPL+R+AL++MG+ LIG+ + L+P P ++ Sbjct: 677 EQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIGNGKHHLIPTFQPLVDG 736 Query: 684 MREARRQNRNT 694 ++ R+ +T Sbjct: 737 SYQSARKKNST 747 >UniRef50_Q128Y3 Radical SAM n=6 Tax=Bacteria RepID=Q128Y3_POLSJ Length = 831 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/784 (58%), Positives = 552/784 (70%), Gaps = 92/784 (11%) Query: 13 LFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEA 72 L S+ +YWAA FG A FLP SR EM+ LGWDSCDII+VTGDAYVDHPSFGMA+ GRMLEA Sbjct: 17 LTSYRKYWAARFGTAKFLPTSRAEMEALGWDSCDIIIVTGDAYVDHPSFGMAVIGRMLEA 76 Query: 73 QGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNV 132 QGFRVGIIAQP+W S D F LGKPNLFFGVTAGNMDSMINRYTAD ++R DDAYTP +V Sbjct: 77 QGFRVGIIAQPEWQSADPFRVLGKPNLFFGVTAGNMDSMINRYTADHKIRSDDAYTPGDV 136 Query: 133 AGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADML 192 GKRPDRA LVY+QRCKEA+KDVP+ILGGIE SLRR AHYDYWSD VRRS++VDSK D+L Sbjct: 137 GGKRPDRAALVYSQRCKEAYKDVPIILGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCDLL 196 Query: 193 MFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVK---EALPGWSGVDSTRLDTPGKID 249 ++GN ER +VE+AHRLA EP++ + D+R TA I + E GW +DST +DTPG+++ Sbjct: 197 LYGNAERAIVEIAHRLAAREPVATMTDIRGTAFIRRSGDETAQGWFEIDSTNVDTPGRVE 256 Query: 250 P--------------------------------------IPHPYGEDLPCADNKP--VAP 269 +P P GE KP VA Sbjct: 257 AHVNPYLMISEQAKEQGATCAREDEAADVAAQAEKDAALLPRPQGEGRGEGATKPLQVAS 316 Query: 270 KKQEAKAVTVQPPRPKPWEK-------------TYVLLPSFEKVKG-------------- 302 + A P P P T+V PS ++G Sbjct: 317 DARTAFKANAGSPHPDPLPGGEGIKANPAIKPLTFVPNPSLSHMQGKIKVPPRDRSVIRL 376 Query: 303 --------DKVLYAHASRILHHETNPGCARALMQKHGD----RYVWINPPAIPLSTEEMD 350 D VLYAHA+R+LH ETNPG ARAL+Q HG+ R VWINPP IPL+T EMD Sbjct: 377 PSYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWINPPPIPLTTAEMD 436 Query: 351 SVFALPYKRVPHPAYGN--------ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRI 402 VF LPY R PHP Y + +IPA+EMIRFSVNIMRGCFGGC+FCSITEHEGRI Sbjct: 437 YVFDLPYARSPHPIYADENGSHDHATKIPAWEMIRFSVNIMRGCFGGCTFCSITEHEGRI 496 Query: 403 IQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPD 462 IQSRSEDS+I EIEAIRDTV GFTG ISDLGGPTANMY + CKSP E CR+ SCVYP Sbjct: 497 IQSRSEDSVIREIEAIRDTVKGFTGAISDLGGPTANMYRIGCKSPEIEAACRKPSCVYPG 556 Query: 463 ICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKI 522 IC +++TNH P I +YRRAR LKG+KKILI+SG+RYD+AV+ P Y+KEL THHVGGYLKI Sbjct: 557 ICSNLNTNHNPLIKMYRRARALKGVKKILISSGLRYDLAVQSPEYVKELVTHHVGGYLKI 616 Query: 523 APEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNL 582 APEHTE+GPL+KMMKPG+GSYD+FK++F+ YS +AGK+Q+LIPYFI+AHPGT DEDM+NL Sbjct: 617 APEHTEQGPLTKMMKPGIGSYDKFKQMFEKYSLEAGKKQFLIPYFIAAHPGTSDEDMMNL 676 Query: 583 ALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKA 642 A+WLKK+ FR DQVQ FYPSP+A +T MY+T KNPL KI SE V + +G+++RRLHKA Sbjct: 677 AIWLKKNGFRADQVQTFYPSPMATATAMYHTNKNPLRKITRDSETVDIVRGERRRRLHKA 736 Query: 643 LLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PTIEEMREARRQNRNTRPALTK 700 LRYHDP NWP++R+AL+AMG+ LIG+ + L+P P + ++ R+ +T L Sbjct: 737 FLRYHDPNNWPVLREALKAMGRADLIGNGKHHLIPTFQPLTDGSYQSARRKNSTTVVLKT 796 Query: 701 HTPM 704 TP+ Sbjct: 797 PTPV 800 >UniRef50_P61405 UPF0313 protein RPA0679 n=29 Tax=Bacteria RepID=Y679_RHOPA Length = 677 Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/659 (64%), Positives = 513/659 (77%), Gaps = 36/659 (5%) Query: 21 AACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII 80 AA PAPFLPMSR EMD+LGWD+CDI+LVTGDAYVDHPSFGMAI GR+LE+QGFRVGII Sbjct: 19 AAPRKPAPFLPMSRAEMDKLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGFRVGII 78 Query: 81 AQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRA 140 +QPDW S + F LGKP +FFGVT GNMDSM+NRYTADRRLRHDDAYTP+ GKRPDR Sbjct: 79 SQPDWQSAEPFKALGKPRVFFGVTGGNMDSMVNRYTADRRLRHDDAYTPNGEGGKRPDRC 138 Query: 141 TLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERP 200 TLVY QRC+EA+KDVP+ILGGIEASLRR AHYDYWSD VRRSVL D+KAD+L++GN ER Sbjct: 139 TLVYAQRCREAFKDVPIILGGIEASLRRIAHYDYWSDKVRRSVLADAKADLLLYGNAERA 198 Query: 201 LVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLP 260 ++EVAHRLA GE E+ D+R A+ + V ++ + +DL Sbjct: 199 VIEVAHRLAAGEAPRELEDIRGVALFRR--------VPENTIEL----------HADDLD 240 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP 320 AD +Q V ++ LPS E+V+ DK YA ASR+LH E+NP Sbjct: 241 AADEG----ARQVRGDVVIR-------------LPSCEQVEQDKEAYARASRVLHRESNP 283 Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSV 380 G AR L+Q+HGDR +W+NPP IPL+TEEMDSV+ LPY R PHP+YGNA+IPA++MI+ SV Sbjct: 284 GNARPLVQRHGDRDLWLNPPPIPLTTEEMDSVYDLPYARAPHPSYGNAKIPAWDMIKTSV 343 Query: 381 NIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMY 440 IMRGCFGGC+FCSITEHEGRIIQSRSE SI+ EIE IRD PGFTGVISD+GGPTANMY Sbjct: 344 TIMRGCFGGCTFCSITEHEGRIIQSRSEASILQEIEKIRDKTPGFTGVISDIGGPTANMY 403 Query: 441 MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDI 500 + CK E +CR+ SCV+PDICP+++T+H+ I LYR+ R++KGIK++++ASGVRYD+ Sbjct: 404 RMACKDSNIESSCRKPSCVFPDICPNLNTSHDDLIRLYRKVREVKGIKRVMVASGVRYDL 463 Query: 501 AVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE 560 AV+ P YIKEL +HHVGGYLKIAPEHTE GPL KMMKPG+G+Y RFK++F+ +KQAGK+ Sbjct: 464 AVKSPAYIKELVSHHVGGYLKIAPEHTERGPLDKMMKPGIGTYHRFKQMFEAAAKQAGKQ 523 Query: 561 QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAK 620 YLIPYFI+AHPGT DEDM+NLALWLK++R+R DQVQ F PSP+A +T MY++G NPL Sbjct: 524 YYLIPYFIAAHPGTTDEDMMNLALWLKRNRYRADQVQTFLPSPMATATAMYHSGVNPLRG 583 Query: 621 IGY-KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA 678 + + SE V KG +QRRLHKA LRYHDP NWP++R+AL+AMG+ LIGSR D LVPA Sbjct: 584 VRHGASEPVEAIKGLRQRRLHKAFLRYHDPDNWPVLREALKAMGRADLIGSRPDQLVPA 642 >UniRef50_Q08XF0 Radical SAM n=3 Tax=Bacteria RepID=Q08XF0_STIAU Length = 636 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/658 (52%), Positives = 445/658 (67%), Gaps = 57/658 (8%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 PFLP +R +M+ GW+ DII+V+GDAYVDHP+FG + R LE +GF+VG+IAQPDW S Sbjct: 10 PFLPTTRADMEARGWEQLDIIIVSGDAYVDHPAFGPVLIARFLEGRGFKVGLIAQPDWHS 69 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 + F LGKP LFFGV AGN+DSM+NR TA ++ R +D Y+P RPDRAT+VY QR Sbjct: 70 AEPFKVLGKPRLFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGRTNCRPDRATIVYGQR 129 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 C+EA+ DVP+ILGGIEASLRR AHYDYWSD +RRS+L D+KAD+L+FG GERP+ EVA R Sbjct: 130 CREAYPDVPIILGGIEASLRRIAHYDYWSDKLRRSILFDAKADLLIFGMGERPVWEVADR 189 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 + GE I +IRDVR TA ++ +A Sbjct: 190 MNRGESIEQIRDVRGTAYLINDA------------------------------------- 212 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 K+ EA P + ++ V+LPSFE+V DK +A +R ETNPG AR L Sbjct: 213 EMKRHEAD------PAKRAADRKTVVLPSFEEVLADKSAFAVMTRDFQMETNPGNARPLA 266 Query: 328 QKHGDRYVWINPPAIPLS--------TEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 Q+HG+R +++NPPA+PL MD ++ LP+ RVPHP Y N IPAYE ++ S Sbjct: 267 QRHGNRAIFMNPPALPLEDGVGSGADAVAMDEMYDLPFNRVPHPMYKNEGIPAYETVKHS 326 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V +MRGCFGGC+FCSITEHEGR+IQSRS +S++ E+ A+R + F G I+DLGGPTANM Sbjct: 327 VVLMRGCFGGCTFCSITEHEGRVIQSRSAESVLREVRALR-RMGDFRGTITDLGGPTANM 385 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y L+CKS E+ CR+LSCV+P +C ++ T+H P I+L R R +GIK + IASGVRYD Sbjct: 386 YKLKCKSEDIEKKCRKLSCVHPGVCENLQTDHGPLIDLMREVRQEEGIKHVFIASGVRYD 445 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 +A P Y+KELA HHVGG L +APEH L KM KPG+ S++RF+ +F S++AGK Sbjct: 446 LAERSPEYVKELAAHHVGGQLSVAPEHVSPRVLEKMKKPGIESFERFQTMFACASEEAGK 505 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQY IPYFIS HPG+ EDMV+LALWLKK+ R QVQ+F P+P+A +TTMYYTG +PL Sbjct: 506 EQYDIPYFISGHPGSTLEDMVDLALWLKKNGKRPRQVQDFIPTPMAVATTMYYTGIDPL- 564 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 K E V+ +G +++RL KALL Y +P +WP+ R+ALE G+K LIG LVP Sbjct: 565 ----KMEPVYTARGLREKRLQKALLLYWNPEHWPMAREALELAGRKDLIGRGPSALVP 618 >UniRef50_D2QYA0 Radical SAM domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYA0_9PLAN Length = 768 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/669 (49%), Positives = 438/669 (65%), Gaps = 61/669 (9%) Query: 25 GPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPD 84 GP LPM+REEM GWD DI+ VTGDAY+DHPSF MAI GR+LEA GFRVGI++QPD Sbjct: 36 GPVRPLPMTREEMQARGWDELDIVFVTGDAYIDHPSFAMAILGRVLEAAGFRVGIVSQPD 95 Query: 85 WSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVY 144 W DD+ RLGKP LFF V+AGNMDSMIN YTA+R++R+DDAY+P G RPDRATL Y Sbjct: 96 WRKVDDWRRLGKPRLFFAVSAGNMDSMINHYTANRKVRNDDAYSPGGRIGLRPDRATLAY 155 Query: 145 TQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEV 204 QR +EA+ VPVI GG+EASLRR AHYDYWSD VRRS+L+D KAD+++FG GE ++++ Sbjct: 156 CQRSREAYPGVPVIAGGVEASLRRLAHYDYWSDKVRRSILLDCKADLVVFGMGEEIILQI 215 Query: 205 AHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADN 264 A LA G+ +RD+R A Sbjct: 216 ARALAEGKDTKSLRDLRGIAY--------------------------------------- 236 Query: 265 KPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCAR 324 A + QPP ++LPSFE V DK +A A+R +H+ETNP AR Sbjct: 237 ---------ALGASEQPP------ADSLVLPSFEAVSTDKKAFAIATRTIHNETNPYNAR 281 Query: 325 ALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMR 384 L+Q H + V NPP++P+S MD ++ LPY R PHP+Y IPA+ MI+ SV IMR Sbjct: 282 RLVQWHDRQAVVCNPPSLPISQGSMDVIYGLPYTRRPHPSYTEP-IPAFGMIKDSVTIMR 340 Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GCFGGC+FCSIT H+GRIIQSRS+DS+I EI+ + + P F G +SD+GGPTANMY + C Sbjct: 341 GCFGGCTFCSITTHQGRIIQSRSKDSVIGEIKRMTED-PKFKGTVSDIGGPTANMYQMTC 399 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED 504 P E+ CRR SCV+P IC + T+HEP I L + AR+L GIKK+L+ASG+R D+A Sbjct: 400 SKPEVEEKCRRQSCVHPTICKLLGTSHEPLIELMKEARELPGIKKVLVASGIRMDLARRS 459 Query: 505 PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI 564 P Y+K+L HHVGG+LK+APEHT+ L+KM KP +++F F SK+AGK+QY++ Sbjct: 460 PEYMKDLVQHHVGGHLKVAPEHTDPDVLNKMRKPSNDDFEKFTASFMKESKKAGKKQYVV 519 Query: 565 PYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYK 624 PYFI++HPG+ + M+NLA++LK++ +R DQVQ+F P+P +T MYYTG +P + Sbjct: 520 PYFIASHPGSDLDAMINLAVFLKQNGYRPDQVQDFIPAPFDVATAMYYTGMDP-----FT 574 Query: 625 SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEM 684 + V++ K K R+L +ALL++ P N+ +R+AL+ G+ LIG D L+PA +E Sbjct: 575 FKPVYIAKQLKDRKLQRALLQFFKPENYFEVREALQRAGRTDLIGEGCDALIPANPPKEA 634 Query: 685 REARRQNRN 693 RR N Sbjct: 635 LARRRSQAN 643 >UniRef50_A7H6E2 Radical SAM domain protein n=4 Tax=Anaeromyxobacter RepID=A7H6E2_ANADF Length = 658 Score = 587 bits (1513), Expect = e-166, Method: Compositional matrix adjust. Identities = 299/645 (46%), Positives = 408/645 (63%), Gaps = 64/645 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP S E+ GW + D++LVTGDAYVDHPSFG A+ GR+LEAQG++VGI+AQPDW S Sbjct: 35 FLPTSAAELRARGWSALDVLLVTGDAYVDHPSFGAAVIGRVLEAQGYKVGIVAQPDWRST 94 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 D +R+G+P LF GVT+G MDSM+N YTA +R R DDAYTPD VAGKRPDRAT Y + C Sbjct: 95 ADVLRMGRPRLFVGVTSGAMDSMVNHYTAHKRRRSDDAYTPDAVAGKRPDRATTAYARLC 154 Query: 149 KEAW-KDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 ++A+ P+++GGIEASLRR AHYDYW D V SVLV S AD+L++G GE+P++E+A R Sbjct: 155 RQAFGATTPIVVGGIEASLRRIAHYDYWDDRVLPSVLVPSGADLLVYGQGEKPVLEIARR 214 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 LA GE + + +D PG +P DL A Sbjct: 215 LASGEDLCGL------------------------VDVPGTALAVP-----DLALA----- 240 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 E + E+ + LP++E++ D+ +A SR+ H E N AR L+ Sbjct: 241 ---MLEGR------------ERKTLELPAYEEIALDRRRFAEFSRLYHLEHNAENARILV 285 Query: 328 QKHG----DRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIM 383 Q+HG R+V +N P STEE+D + LPY R HP+YG A IPA E IR+S+ I+ Sbjct: 286 QRHGRGERARFVVVNEPMAAPSTEELDRIAELPYVREAHPSYGGAHIPALEQIRWSIQIL 345 Query: 384 RGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLR 443 RGC GC+FC ITEH+GR I SRSE S++ E+ + + F G I+D+GG TANM+ +R Sbjct: 346 RGCAAGCAFCCITEHQGRDIASRSEASVLRELATL-ASKESFKGTITDVGGATANMWGMR 404 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 C A CRR SCVYP +C +H P ++LY +AR +KG+K + + SGVRYD+A Sbjct: 405 CTDAEAHAVCRRASCVYPTVCKFFAVDHGPLVDLYEKARKVKGVKHLFVGSGVRYDLAQA 464 Query: 504 D----PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 D RY+K L HHV G LK+APEH E L M KPG+ S++R ++ F+ YS++AGK Sbjct: 465 DTKNGARYLKTLVQHHVSGQLKVAPEHVCEPVLKLMKKPGVSSFERLRKDFERYSREAGK 524 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQYL+PYFIS+HPG+ E L +L+ +R++ QVQ+F P+P+ ++ MY++G +P+ Sbjct: 525 EQYLVPYFISSHPGSSLEQAAELMDYLQDNRWKPQQVQDFMPTPMTLASDMYWSGYHPMT 584 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 E V V + ++R+ KALLR+ DPAN PLI +AL +G+ Sbjct: 585 -----GEPVHVTRDMDEKRMQKALLRWGDPANRPLIEKALRKLGR 624 >UniRef50_P61404 UPF0313 protein GSU2873 n=8 Tax=Proteobacteria RepID=Y2873_GEOSL Length = 605 Score = 585 bits (1507), Expect = e-165, Method: Compositional matrix adjust. Identities = 306/637 (48%), Positives = 402/637 (63%), Gaps = 61/637 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP++R E + GWD DI+ VTGDAYVDHP+FG+ + R LE GFRVGII QPDW S Sbjct: 3 FLPVTRGEALKRGWDELDIVFVTGDAYVDHPAFGVPLLARWLEFHGFRVGIIPQPDWRSC 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + FM LG+P LFF V++G MDSM+ YT R+LRHDDAYTP N G RP+RAT+VYT R Sbjct: 63 EPFMALGRPRLFFAVSSGAMDSMVAHYTPARKLRHDDAYTPGNRHGARPNRATIVYTSRL 122 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 KEA++DVPV++GGIEASLRR AHYDYW D VRRS+L+D+KAD+L+ G GERP++E+A R+ Sbjct: 123 KEAYRDVPVVIGGIEASLRRFAHYDYWEDKVRRSLLLDAKADLLVHGMGERPILELARRV 182 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GEP I D+R TA+++ +GV +LP Sbjct: 183 RTGEPFQAIADIRGTAVVLGRGAAPPAGV-------------------VELP-------- 215 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 P+E +V D+ YA A R+L E NP CA L+Q Sbjct: 216 -----------------PFE----------EVAADRHRYAEAFRLLSREQNPHCAHPLVQ 248 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 +HGDR + NPPA PL E+DSV+ALP++R PHP++G IPAYE IR SV RGCFG Sbjct: 249 RHGDRTLLCNPPAYPLEEAELDSVYALPFQRAPHPSHGEP-IPAYEQIRASVTTHRGCFG 307 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFC+IT H+G++IQSRSE S++ E+E + + F G +SD+GGPTANMY + C + R Sbjct: 308 GCSFCAITHHQGKVIQSRSERSVLAEVERM-AAMAWFRGSVSDVGGPTANMYGVHCGNTR 366 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 CRR SC+YP C ++ E L R R ++G++ + ++SG+RYD+ P Y Sbjct: 367 GGHACRRESCLYPSPCRYLAVGGERGAALLRAVRGVRGVRNVAVSSGIRYDLMERQPAYF 426 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 +EL HHVGG LK+APEH M KPG S+DRF E F S + GK+QY+IPY + Sbjct: 427 RELVAHHVGGLLKVAPEHMVARVTDLMRKPGKESFDRFLERFRRESARLGKKQYIIPYLM 486 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 S HPG +DMV LAL+LK+ R++QVQ+F P+P ST MY+TG +P A V Sbjct: 487 SGHPGCTLDDMVELALFLKRAGLRVEQVQDFTPTPGTLSTCMYHTGLDPFA-----GAPV 541 Query: 629 FVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKK 665 VP+GD+++RL KALL +H P + AL A G++ Sbjct: 542 HVPRGDREKRLQKALLLWHLPTERRNVLDALRACGRE 578 >UniRef50_Q8THA2 UPF0313 protein MA_4618 n=6 Tax=Archaea RepID=Y4618_METAC Length = 742 Score = 556 bits (1433), Expect = e-157, Method: Compositional matrix adjust. Identities = 286/648 (44%), Positives = 403/648 (62%), Gaps = 37/648 (5%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLPMS EE+ GW DIILVTGDAYVDH SFG AI GR+LE GFRVGIIAQP W + Sbjct: 126 FLPMSPEEVKARGWKELDIILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWDNP 185 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 +D +LG+P LFF V+AGN DSM++ T + R DAY+P N G RP+R+ ++Y+ R Sbjct: 186 EDLKKLGRPRLFFSVSAGNTDSMVSNLTPGLKPRKKDAYSPGNKTGLRPNRSVIIYSNRI 245 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 KEA+ +VP++LGGIEASLRR AHYDY SD VR+++L D+ AD++++G GE +VE+A RL Sbjct: 246 KEAFPNVPIVLGGIEASLRRFAHYDYLSDKVRQAILADAPADLVVYGMGELQIVEIAKRL 305 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GE I +IRD+ T + K + W L GK N+ VA Sbjct: 306 QAGEDIRKIRDIPGT--VWKMEVRAWK-----ELKEKGK--------------GTNEAVA 344 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 P + K Y+ +PSF +V DK +A A R E NP + ++Q Sbjct: 345 RD---------TAPEAAEFFKEYIEIPSFSEVSQDKAAFAKAFRTYFLEQNPITGKGIVQ 395 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 H + N P PL+ E+D V+ LPY HP+Y IPA EM++FS+ RGCFG Sbjct: 396 PHPKTVIVQNRPMRPLTEAELDHVYELPYTGEAHPSYTEP-IPALEMVKFSLTTHRGCFG 454 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFC+IT+H+GR+I SRS +S++ E + + + P F G+I+ +GGPTANMY + C+S Sbjct: 455 GCSFCAITQHQGRMITSRSIESVLREAKKLTEK-PDFKGIINGVGGPTANMYGMGCRSWE 513 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 + C +C+YP +CP +DT+H+ + L +R R+L G+K + GVRYD+A+ED Y+ Sbjct: 514 KQGACLDKACLYPRVCPALDTSHKKLLELMKRLRELPGVKHVFTGYGVRYDLALEDEEYL 573 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 +EL THH+ G L+IAPEH + M KPG Y+RF E F ++K+ GKEQY++ Y + Sbjct: 574 EELCTHHISGQLRIAPEHFSKRVTDAMSKPGKKVYERFSEKFAAFNKKCGKEQYIVNYLM 633 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 S HPG +DM+ +A +L+ H +QVQ+F P+P+ ST MYYTG +P + + V Sbjct: 634 SGHPGCTLKDMIEMAEYLRDHGGYTEQVQDFTPTPMTVSTCMYYTGLDP-----FTGKKV 688 Query: 629 FVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV 676 +V K K++ + +AL+ Y PAN+ L+ +ALE G+ L+G+ CL+ Sbjct: 689 YVAKDKKEKAMQRALMHYRSPANYELVYEALEKAGRLDLVGNAHKCLI 736 >UniRef50_Q0STL9 UPF0313 protein CPR_1216 n=60 Tax=cellular organisms RepID=Y1216_CLOPS Length = 662 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 291/718 (40%), Positives = 414/718 (57%), Gaps = 75/718 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP+ +++M + GW+ CD +LVT DAY+DH SFG AI R+LE G++VGIIAQPDW S Sbjct: 6 FLPICKDDMIERGWEQCDFVLVTADAYIDHHSFGTAIISRVLENAGYKVGIIAQPDWKSV 65 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DDF +LG+P L F V GNMD M+N YT ++LR D YTP GKRPDRAT+VY + Sbjct: 66 DDFKKLGRPRLGFLVNGGNMDPMVNHYTVSKKLRKKDLYTPKGEMGKRPDRATIVYCNKI 125 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 +EA+KDV +++GGIEASLRR AHYDYW + VR+S+LVDS AD+L++G E+ +VEVA L Sbjct: 126 REAYKDVNIVIGGIEASLRRFAHYDYWDNKVRKSILVDSGADLLVYGMSEKQIVEVADFL 185 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 G IR + T I D + Y E Sbjct: 186 NQGFDGKYIRHIPGTCYIA---------------------DSLDEIYEE----------- 213 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 +++LPSF+ V DK YA +I + E +P R L+Q Sbjct: 214 ----------------------HIVLPSFKDVSSDKRTYAECFKIQYDEQDPVRGRTLVQ 251 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAY-GNARIPAYEMIRFSVNIMRGCF 387 +H +YV IN P +PLS EE+D V+ALPY++ HP Y + I A E ++FS+ RGC Sbjct: 252 EHNGKYVVINKPEMPLSREELDRVYALPYQKTYHPIYEKDGGIAAIEEVKFSLVSSRGCS 311 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 G CSFC+IT H+GRI+ SRSEDSI+ E E I F G I D+GGPTAN CK Sbjct: 312 GNCSFCAITFHQGRIVTSRSEDSIVEEAEEI-TKYDDFKGYIHDIGGPTANFRKPACKKQ 370 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAVEDP 505 C+ C+ P IC +M+ +H ++L RR R L GIKK+ I SG+RYD +A +D Sbjct: 371 LTLGACKHKRCMSPGICKNMEVDHREYLHLLRRVRKLPGIKKVFIRSGLRYDYIMADKDD 430 Query: 506 RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIP 565 + KEL HHV G LK+APEH L M KP +YD F+ F +++ GK+Q++IP Sbjct: 431 TFFKELVEHHVSGQLKVAPEHVSPNVLKYMGKPAGKTYDEFRRKFFKITERLGKKQFIIP 490 Query: 566 YFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS 625 Y +S+HPG + ED + LA +L+ ++ +QVQ+FYP+P STTM+YT +PL Sbjct: 491 YLMSSHPGCKLEDAIMLAEYLRDINYQPEQVQDFYPTPGTLSTTMFYTELDPLT-----M 545 Query: 626 EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV--------- 676 E+V++P+ +++ + +ALL++ +P N+ ++ AL G++ LIG+ CL+ Sbjct: 546 EEVYIPRSKEEKAMQRALLQFKNPKNYNIVYDALVKAGREDLIGNGPKCLIRDKNSFGKG 605 Query: 677 --PAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKR 732 + R++R +N R + K +++Q + +S+ V+ G K+R Sbjct: 606 NNHSNHKSGGRKSRNENSGRRESEDKKRSSHSKKQR-GNKSRGFDQKSQRVSKGKKRR 662 >UniRef50_A1ALG7 UPF0313 protein Ppro_0556 n=9 Tax=Desulfuromonadales RepID=Y556_PELPD Length = 623 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 278/640 (43%), Positives = 385/640 (60%), Gaps = 64/640 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 F+P +R EM + GW+ D+I V GDAYVDHP+FG+ + R LE GFRVG+IAQPDW S Sbjct: 3 FIPTTRSEMHRRGWEQLDVIFVNGDAYVDHPAFGVPLLARWLEKHGFRVGVIAQPDWRSV 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + FM LG+P LFF +AG MDSM+ YT R+LRHDDAYTP N G RP+RATL+YT R Sbjct: 63 EPFMALGRPRLFFAASAGAMDSMVAHYTPARKLRHDDAYTPGNRHGARPNRATLIYTSRL 122 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 KEA++DVPV++GGIEASLRR AHYDYW + VRRS+L D+KAD+L++G ER ++E+A R+ Sbjct: 123 KEAFRDVPVVIGGIEASLRRFAHYDYWENRVRRSLLFDAKADLLLYGMAERSMLELAQRM 182 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GE +++IR +R T + K G D ++PC + + Sbjct: 183 GRGESLADIRGLRGTCWVEK---AGHHLTDHL-----------------EIPCFEECG-S 221 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 + + A+A + P+ G ++ H R+L CA Sbjct: 222 DRLKFAEAFRLASREQNPY-------------NGRTIVQRHGDRLLV------CA----- 257 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 PP++PL EMDS++ALP+++ PHP+YG IPA+E IR S+ RGCFG Sbjct: 258 ----------PPSLPLEEAEMDSLYALPFEKAPHPSYGET-IPAWEQIRCSITSHRGCFG 306 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEI-EAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GCSFC+I H+G++IQSR + S+ +EI E +R P F G ISD+GGPTANMY L C Sbjct: 307 GCSFCAIAMHQGKLIQSRGQSSVESEIRELVRK--PWFRGSISDIGGPTANMYGLSCGDS 364 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 A + CRR SC++P C H+ + + L ARD G++ + ++SGVRYD+ P Y Sbjct: 365 AAMKCCRRESCLFPKQCRHLIVDDRRAVRLLHAARDFAGVRHVAVSSGVRYDLLERQPAY 424 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 +EL HHVGG LK+APEH E M KPG+ ++RF F S++ GK Q ++PY Sbjct: 425 CRELIAHHVGGLLKVAPEHLVERVTMLMRKPGLAVFERFLSRFREESRRLGKPQGIVPYL 484 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSED 627 IS HPG DM+ LAL L++ R++QVQ+F P+P +T MYY+G +P E Sbjct: 485 ISGHPGCSLADMLELALALQRLGLRVEQVQDFTPTPGTCATCMYYSGIDP-----ETGEK 539 Query: 628 VFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHL 667 ++V D+++ L KALL H P + +AL +G++ L Sbjct: 540 LYVATSDREKGLQKALLLGHLPGERKKVLEALALLGREEL 579 >UniRef50_C9KPY8 Radical SAM domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY8_9FIRM Length = 607 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 282/671 (42%), Positives = 392/671 (58%), Gaps = 75/671 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP+ R +M++ GW D + ++GDAYVDHPSFG AI R+LE G++VGII QPDW S Sbjct: 4 FLPICRRDMEERGWHELDFVFISGDAYVDHPSFGPAIICRLLEKHGYKVGIIPQPDWHST 63 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DF RLGKP L F V+AGNMDS++N++TA +++RH+DAY+P AG RP+RAT+VY R Sbjct: 64 KDFDRLGKPRLGFLVSAGNMDSLLNKFTAAKKVRHEDAYSPGGQAGHRPERATIVYCNRL 123 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 +E + DVP+I+GGIEASLRR AHYDYWS+ +RRS+LVDS+AD+L++G GER ++E+A L Sbjct: 124 RELYPDVPIIIGGIEASLRRMAHYDYWSNAIRRSILVDSQADLLIYGMGERAILEIAADL 183 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 G ++ I+DV T V Sbjct: 184 QQGVEVANIQDVHGTCYRV----------------------------------------- 202 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 P + W+ Y+ LPSFE V+ DK +A A +I + E +P R L+Q Sbjct: 203 ------------PNKDYAWD--YIELPSFEAVRKDKKTFAEAFKIEYLEQDPIRGRKLLQ 248 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNAR-IPAYEMIRFSVNIMRGCF 387 ++ + V NPPA+PLS E+MD V+ LPY R HP Y A +PA + ++FS+ RGCF Sbjct: 249 QNDEWCVVQNPPAMPLSEEQMDEVYGLPYMRTYHPIYEKAGGVPAIKEVQFSLVSQRGCF 308 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGC+FC+I HEGRIIQ RS S+I E + I + GF G I D+GGPTAN C Sbjct: 309 GGCNFCAIISHEGRIIQRRSHASLIREAK-ILTHMKGFKGYIHDVGGPTANFRRTSCDGQ 367 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD-IAVEDPR 506 TCR C+ P+ C + +H I L R R L G+KK+ + SG+R+D + + Sbjct: 368 LKRGTCRGKPCLSPEPCKLLVADHSDYIKLLRELRSLPGVKKVFVRSGIRFDYLLLAKDD 427 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 ++ EL +HV G LKIAPEH + M K Y RF E F +++ GK+QYL+PY Sbjct: 428 FLYELCKYHVSGQLKIAPEHISDRVTRLMGKSNCAVYLRFVEKFRRMNERLGKKQYLVPY 487 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 F+S+HPG+ D V LA +++ + QVQ+F P+P ST M+YTG +P+ E Sbjct: 488 FMSSHPGSELSDAVELAEFIRDMGYHPQQVQDFIPTPGTLSTCMWYTGIDPMT-----GE 542 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 V+ K +++R+ +AL++Y P N ++R+AL ++ LIG CLV Sbjct: 543 KVYSAKSYEEKRMQRALMQYWLPKNHEIVRKALHLAHREDLIGFGPKCLV---------- 592 Query: 687 ARRQNRNTRPA 697 R R TRPA Sbjct: 593 --RPRRETRPA 601 >UniRef50_D1P9M1 Radical SAM domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9M1_9BACT Length = 730 Score = 525 bits (1351), Expect = e-147, Method: Compositional matrix adjust. Identities = 280/652 (42%), Positives = 387/652 (59%), Gaps = 70/652 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP +++E + GWD D+IL +GDAYVDHPSFG AI GR+LEA G+RV I+ QPDW Sbjct: 8 FLPTTKKECELRGWDELDVILFSGDAYVDHPSFGPAILGRILEANGYRVAIVPQPDWHGD 67 Query: 89 -DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 DF +LG+P LFFGV+ G MDSM+NRYTA+RR+R +DA++PD+ RPD ++VYTQ Sbjct: 68 FRDFKKLGRPRLFFGVSPGAMDSMVNRYTANRRMRSEDAFSPDSRHDMRPDYPSIVYTQI 127 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 K+ + DVPV LGGIEASLRR +HYDYW D +R+ +L DS AD++++G GER +VE+A+ Sbjct: 128 LKKLFPDVPVALGGIEASLRRISHYDYWKDELRKCILCDSGADLILYGMGERSIVELANA 187 Query: 208 LAMGEPISEIRDVRNTAIIVKEA-LPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 A G+ +S+I ++ KE+ +PG D D I H + E C NK Sbjct: 188 FAEGKTLSQIHEMPQVVFYCKESEIPGGFKDD----------DIILHSHEE---CLHNK- 233 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 K +A+ V R L E N A+ + Sbjct: 234 ----KGQAENV----------------------------------RHLEEEANKMHAQRM 255 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC 386 +Q+ +YV +NPP ++T E+D+ F LPY R+PHP Y IPAYEMI+FSVN+ RGC Sbjct: 256 IQEVDGKYVVVNPPFPLMTTAELDAAFDLPYTRLPHPKYKGKTIPAYEMIKFSVNLHRGC 315 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 FGGCSFC+I+ H+G+ + RS++SI+ E++ I +P F G +SDLGGP+ANMY + K+ Sbjct: 316 FGGCSFCTISAHQGKFVVCRSKESILKEVKKII-QMPDFKGYLSDLGGPSANMYGMHGKN 374 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 +A + C+R SCV P ICP+++T+H + +Y L GIKK I SGVRYD+ + + Sbjct: 375 QKACEVCKRPSCVNPQICPNLNTDHSKLLEIYHAVDALPGIKKSFIGSGVRYDLLLHKSK 434 Query: 507 ----------YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ 556 Y +EL T HV G LK+APEHT L M KP + FK +FD +K+ Sbjct: 435 DEKVNQAAREYTRELITKHVSGRLKVAPEHTSPEVLKFMRKPSFDLFYEFKRIFDKINKE 494 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 G Q +IPYFIS+HPG +EDM LA+ K F L+QVQ+F P+P+ ST +YTG + Sbjct: 495 EGLNQQIIPYFISSHPGCHEEDMAELAVITKGLDFHLEQVQDFTPTPMTISTETWYTGYD 554 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 P Y E V K K++ + ++ P I L +G+ LI Sbjct: 555 P-----YTLEPVSSAKTQKEKLAQRMFFFWYKPEERRAIESELRRIGRADLI 601 >UniRef50_B0VIP9 Radical SAM domain protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIP9_9BACT Length = 547 Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust. Identities = 270/618 (43%), Positives = 372/618 (60%), Gaps = 75/618 (12%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 PFLP+++ ++ + WD DIIL++GDAY+DHPSF AI GR LEA GFRVGII QPDW + Sbjct: 2 PFLPVNQSDLKERDWDYLDIILISGDAYIDHPSFAAAIIGRTLEAAGFRVGIIPQPDWRN 61 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 F LGKP LFFG+TAGNMDSM+N YTA R+LR+DDAY+PD ++GKRPDRA ++YT Sbjct: 62 DSSFTVLGKPRLFFGITAGNMDSMVNHYTAQRKLRNDDAYSPDGISGKRPDRAIIIYTNI 121 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 K +K VP+++GGIE+SLRR AHYD+W D VR S+L DSK D+L++G GERP+ ++A Sbjct: 122 IKRLFKGVPIVIGGIESSLRRIAHYDFWQDKVRNSILADSKGDILIYGMGERPVTDLAIL 181 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L G P+S I++ LP ST P ED Sbjct: 182 LQKGVPVSSIQN-----------LPSTVVFSST------------FPAKED--------- 209 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 ++LP EK + Y + E N + + Sbjct: 210 ------------------------IILPEAEKCSAKETFYQMTRQF---EDNYR-TKTIF 241 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 QK+ R++ NPPA PL+T+EMDS++ALP+ PHP Y +IPAYE I+ S+ RGC+ Sbjct: 242 QKNAGRWLKHNPPAKPLTTKEMDSIYALPFAYQPHPVYAGHKIPAYEQIKDSITSHRGCY 301 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGC+FC+I H+GR IQSRSE S++ E + TG ISD+GGPTANMY C Sbjct: 302 GGCNFCAIACHQGRNIQSRSETSLLKEAQK-------HTGTISDVGGPTANMYASFCGLD 354 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 E TC+R SC+ PDICP++ NH + + + +L IK + IASG+RYD+AV D Y Sbjct: 355 FPE-TCKRNSCLVPDICPNLQINHSVQLEILAKIGNLPRIKHLFIASGIRYDMAVNDDNY 413 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 I+ LAT + GG LK+APEH+ L M KP + +++F + F Y+ +AG + +IPY Sbjct: 414 IEALATKYTGGRLKLAPEHSVSSVLRLMNKPQIEVFEKFCKKFYFYTNKAGLKSQIIPYL 473 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS-E 626 I HPGT ED L WL+K++ +++QVQ F P+P+ ST MYYTG + Y++ + Sbjct: 474 IIGHPGTTMEDAFELRNWLRKNKLKVEQVQEFTPTPMTISTCMYYTG------LDYETGK 527 Query: 627 DVFVPKGDKQRRLHKALL 644 + +PK + RR + ++ Sbjct: 528 PIHIPKPSEIRRQKELII 545 >UniRef50_C9MQP2 Radical SAM domain protein n=4 Tax=Prevotella RepID=C9MQP2_9BACT Length = 710 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 265/661 (40%), Positives = 389/661 (58%), Gaps = 68/661 (10%) Query: 24 FGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQP 83 F FLP +++E++ GWD DIIL +GDAY+DHP+FG+A+ GR LEA G++V I+ QP Sbjct: 42 FQLTDFLPTTKKEVELRGWDQLDIILFSGDAYIDHPAFGVAVIGRTLEAAGYKVAIVPQP 101 Query: 84 DWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATL 142 DW DF +LG+P L+FG+ G MDSM+N+YTA+RRLR +DAY+PD RP+ ++ Sbjct: 102 DWHGDLRDFKKLGRPRLYFGIAPGAMDSMVNKYTANRRLRSEDAYSPDGRHDLRPEYPSI 161 Query: 143 VYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLV 202 VY K+ + DVPV+LGGIEASLRR HYDYW D +R+ +L D+ ADM+++G GE+ +V Sbjct: 162 VYANILKQLYPDVPVVLGGIEASLRRLTHYDYWKDCLRKCILCDAHADMIIYGMGEKQVV 221 Query: 203 EVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCA 262 E+A L G I ++++V T + KE + PG I+ ED Sbjct: 222 EIAKELETGIKIKDLKNVPQTVYLCKEE------------EIPGGIN-------EDD--- 259 Query: 263 DNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 ++L S E +K A + + E+N Sbjct: 260 -----------------------------IVLHSHEACLHNKKFQAENFKYIEEESNKKH 290 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 A+ ++Q + Y +NPP ++T E+D+ + LPY R PHP Y IPAYEMI+ SVNI Sbjct: 291 AQRILQAVDNLYAVVNPPYPTMTTAEIDAAYDLPYTREPHPKYRGKTIPAYEMIKHSVNI 350 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 RGCFGGC+FC+I+ H+G+ + RS++SI+ E++ + + +P F G +SDLGGP+ANMY + Sbjct: 351 HRGCFGGCAFCTISAHQGKFVSCRSKESILKEVKQVIE-MPDFKGYLSDLGGPSANMYGM 409 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 K+ +A + C+R SCV P+ICP+++T+H +++Y +L GIKK I SGVRYD+ + Sbjct: 410 AGKNQKACEHCKRPSCVNPEICPNLNTDHSRLLDIYHSVDELSGIKKSFIGSGVRYDLLL 469 Query: 503 EDPR----------YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDT 552 + Y EL T HV G LK+APEHT + L M KP + FK +FD Sbjct: 470 HKSKDEKSNEAARQYTHELITRHVSGRLKVAPEHTSDRVLKLMRKPSFQQFYIFKRIFDR 529 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 +++ G Q +IPYFIS+HPG ++EDM LA+ K F L+Q+Q+F P+P+ ST +Y Sbjct: 530 INREEGLRQQIIPYFISSHPGCQEEDMAELAVLTKDLDFHLEQIQDFTPTPMTVSTEAWY 589 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 TG +P Y E +F K K++ + ++ P I + L+ +G+ LIG Sbjct: 590 TGYDP-----YTLEPIFSAKTPKEKLAQRQFFFWYKPEARRDIERELQRIGRSDLIGKLY 644 Query: 673 D 673 D Sbjct: 645 D 645 >UniRef50_C9RQ46 Radical SAM domain protein n=28 Tax=Bacteria RepID=C9RQ46_FIBSS Length = 739 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/650 (41%), Positives = 376/650 (57%), Gaps = 73/650 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP+ +E++D+LGWD D+I+++ DAYVDHP FG A+ GR+LE +G RV I+ QP+W Sbjct: 6 FLPICKEDLDELGWDYVDVIIISADAYVDHPCFGHAVVGRLLEHEGLRVAILPQPNWRDD 65 Query: 89 -DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 DF +LG P LFF +++G MDSM+N YTA +RLR DDA+TP N AG RPD AT Y + Sbjct: 66 LRDFKKLGTPRLFFAISSG-MDSMVNHYTAAKRLRSDDAFTPGNKAGFRPDYATYTYAKI 124 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 K+ + DVP+++GG+E+SLRR HYDYWS+ ++ S+L D++AD+L++G GE+PL E+ Sbjct: 125 LKKLYPDVPLLIGGLESSLRRVTHYDYWSNKLKPSILFDTQADILVYGMGEKPLKEIVRL 184 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L G P S + V TA + Sbjct: 185 LKKGVPFSSLNSVPQTAYL----------------------------------------- 203 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 APK P+ WE + L S+E+ K R + E N ++ Sbjct: 204 APKGS--------VPKNSKWED--LRLYSYEECLESKRNQIENCRRVDIECNKWFQHRIL 253 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGC 386 Q ++ V INP P+ E+D F PY R PHP Y IPA++MI+FS+N RGC Sbjct: 254 QDVAEQTVVINPAYPPMEYGELDESFEYPYAREPHPRYKKRGNIPAFDMIKFSINTHRGC 313 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 FGGCSFC+I H+G+ I SRS +SI+ E+E + + + GF G I+DLGGP+ANMY +R + Sbjct: 314 FGGCSFCAINAHQGKFIASRSRESILREVEIVTN-MEGFAGTITDLGGPSANMYNMRGRD 372 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED-- 504 P Q C R SC+ P IC +MDT+H ++LYR R+ +K + I SGVRYD+ +++ Sbjct: 373 PSRCQKCARASCLTPKICDNMDTHHAEILSLYREVRNHPKVKHLFIGSGVRYDMLLQETD 432 Query: 505 --------PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ 556 Y +EL +HV G LK+APEHT + L M KP + +FKE FD K+ Sbjct: 433 DEELRKDHEEYARELIDYHVSGRLKVAPEHTSDAVLKLMRKPSFTLFHKFKEFFDDECKR 492 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 GK+Q LIPYFIS+HPG + DM LAL K+ F+L+QVQ+F P+P+ +T M+Y Sbjct: 493 IGKKQQLIPYFISSHPGCTEADMAELALETKQLGFQLEQVQDFTPTPMTIATEMFYAEMT 552 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE--AMGK 664 P K +FV K +++ K ++ PAN P +R+ LE MGK Sbjct: 553 PDGK------PLFVAKTPEEKANQKQFFFWYIPANRPHLREVLERLKMGK 596 >UniRef50_Q7MVU9 UPF0313 protein PG_0934 n=25 Tax=Bacteria RepID=Y934_PORGI Length = 634 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 275/706 (38%), Positives = 398/706 (56%), Gaps = 94/706 (13%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 +LP S++EM+ GWD D+IL +GDAYVDHPSFG A+ GR+LEA+G RV I+ QP+W Sbjct: 10 WLPTSKKEMEAKGWDEADVILFSGDAYVDHPSFGAAVVGRILEAEGLRVAIVPQPNWRDD 69 Query: 89 -DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 DF +LG+P LFFGV+AG MDSM+N+YTA+RRLR +DAYTPD + RPD T+VYT+ Sbjct: 70 LRDFRKLGRPRLFFGVSAGAMDSMVNKYTANRRLRSEDAYTPDRRSDMRPDYPTIVYTRI 129 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 KE + DVPVI+GGIEASLRR HYDYW D + +L S AD+L++G GE PL E+A R Sbjct: 130 LKELFPDVPVIVGGIEASLRRLTHYDYWQDKLLPGILYQSGADLLIYGMGELPLHEIAQR 189 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L GEP ++ +R A +V + TP +PC +++ Sbjct: 190 LIAGEPFDSLKSIRQIAYLVPKG------------KTP-------------VPCENDRH- 223 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 L S E+ DK A R + ++N A ++ Sbjct: 224 --------------------------LFSHEECLSDKRKQAQNFREIEIQSNRYEADRIL 257 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 Q GD + +NPP P+ST ++D F LPY R+PHP Y I AYEMI+ SVN+ RGCF Sbjct: 258 QAVGDSTIVVNPPFPPMSTAQIDQSFDLPYTRLPHPRYKGKIISAYEMIKHSVNVHRGCF 317 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGC+FC+I+ H+G+ I SRSE S++ E++ I + + F G +SD+GGP+ANMY ++ Sbjct: 318 GGCAFCTISAHQGKFIASRSEASVLREVKEITE-MEDFKGYLSDVGGPSANMYKMQGYDL 376 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR- 506 + C++ SC++P++CP+++ +H P ++L RR IKK I SGVR D+ + + + Sbjct: 377 SICKRCKKPSCIHPNVCPNLNADHRPLLDLLRRIDKNPKIKKSFIGSGVRMDLLLHNYKD 436 Query: 507 ---------YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 Y ++L HV G LK+APEH+ + L+ M KP + F + F ++ Sbjct: 437 KVLKKAADEYTEDLIVKHVSGRLKVAPEHSSDRVLNLMRKPPFRQFAEFTKRFQRINEAH 496 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 G Q LIPYFIS+HPG +EDM LA+ KK F+L+Q+Q+F P+P+ +T MYYTG +P Sbjct: 497 GLRQQLIPYFISSHPGCTEEDMAELAILTKKLDFKLEQIQDFTPTPMTLATEMYYTGYHP 556 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 Y + V+ +++ ++ IR+ L +G+ LI Sbjct: 557 -----YTLQPVYTAIKKEEKMRQHMFFFWYKREEADKIRRELHRIGRPDLI--------- 602 Query: 678 APTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSR 723 A+ +R T +HTP P+T + S ++SR Sbjct: 603 ---------AKLFDRTTSSRNDRHTP-------PSTQPRKSKSKSR 632 >UniRef50_A7IB47 Radical SAM N-terminal domain protein n=7 Tax=cellular organisms RepID=A7IB47_METB6 Length = 640 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/692 (38%), Positives = 390/692 (56%), Gaps = 69/692 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP + E G + DIILVTGDAYVDHPSFG A+ GR+L GF VGIIAQPD +++ Sbjct: 7 FLPRTPAEGRACGIEEFDIILVTGDAYVDHPSFGTALVGRVLWDAGFSVGIIAQPDATTE 66 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DF LG+P LFFG+++GN+DSM+N +T + + R D Y+ + +RPDRA +VY R Sbjct: 67 KDFTVLGRPRLFFGISSGNVDSMVNNFTPNLKRRSSDVYSHGGIP-RRPDRAAIVYANRV 125 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 A+ D P++LGGIEASLRR AHYDYW D VR+S+L D+ AD+L +G E+ +V +A RL Sbjct: 126 HAAFPDTPIVLGGIEASLRRFAHYDYWQDRVRQSILADAPADLLAYGMAEQQMVAIARRL 185 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GEP IRD+ T ++ A W HP G Sbjct: 186 DTGEPARAIRDIPGTCYTMEVA--EWRAT---------------HPEG------------ 216 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 V +P F ++ DK YA A + + E +P R + Q Sbjct: 217 ----------------------VVEIPGFSEISSDKTAYARAFALHYREQDPVRGRPVAQ 254 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 H + NPPA PLS +++D ++ LP+ R HP Y +PA E ++FSV RGCFG Sbjct: 255 PHPKTVIVQNPPARPLSGDKLDHIYELPFSRRAHPLYKKP-VPALEPVQFSVVSHRGCFG 313 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 CSFC++T H+GRI+QSRS SI+ E+ + +P F G++ D+GGPTANMY + C+ Sbjct: 314 SCSFCALTHHQGRIVQSRSAASIVREVTRM-AAMPEFKGIVQDVGGPTANMYGMACERWD 372 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED---P 505 C SC C + TNH P + + R+ ++ G+KK+ + SG+RYD+ + D Sbjct: 373 GAGACPEKSC--SPACQTLRTNHRPLVEILRKISEVPGVKKVFVGSGIRYDLVLADDLNS 430 Query: 506 RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIP 565 RY++ L HV G+LK+APEH M KP ++RF++ F + K QYL+P Sbjct: 431 RYLETLCERHVSGHLKVAPEHISPRVTKAMNKPDGSVFERFRDRFTALQQGKAKRQYLVP 490 Query: 566 YFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS 625 YF+S HPG DMV LA +++ +QVQ+F P+P++ ST MYYTG +P + Sbjct: 491 YFMSGHPGCTISDMVALAEYIRDRGLYTEQVQDFTPTPMSVSTCMYYTGLDP-----FTL 545 Query: 626 EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPT-IEEM 684 E V VPKG +++++ +ALL+Y +P N L+ + L G++ LIG+ + CLV + Sbjct: 546 EPVHVPKG-REKKIQRALLQYREPQNRGLVFEGLRMAGREDLIGTGKQCLVSGDVYLRRS 604 Query: 685 REA---RRQNRNTRPALTKHTPMATQRQTPAT 713 R R+++ TRP + + +++ P + Sbjct: 605 RPGPVPRQKSSGTRPGGAAGSGTSRKKERPGS 636 >UniRef50_A9KIV0 Radical SAM domain protein n=5 Tax=Clostridiales RepID=A9KIV0_CLOPH Length = 685 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 270/705 (38%), Positives = 404/705 (57%), Gaps = 67/705 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 +LP+SRE+M+ GW+ CD + V GDAYVDHPSFG AI R+LE+ G++VGIIAQPDW + Sbjct: 5 YLPISREDMNNRGWEQCDFVYVIGDAYVDHPSFGPAIISRVLESNGYKVGIIAQPDWKDE 64 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + LG P L F V GNMD+M+N Y+ ++ R DAY+P G RPDRAT+VY Sbjct: 65 NSIQILGTPRLGFLVCGGNMDTMVNHYSVAKKRRATDAYSPGGQIGLRPDRATIVYCNLI 124 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++ +KD P+I+GGIE+SLRR AHYDYWSD VRRS+L+DS+AD+L +G GE +VE+A Sbjct: 125 RKVYKDAPIIIGGIESSLRRLAHYDYWSDKVRRSILLDSQADVLSYGMGEHSIVELA--- 181 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 D N+ I +K+ V TR DL Sbjct: 182 ----------DALNSGIAIKDITFISGTVYKTR----------------DLS-------- 207 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 +V P V+LPS+E + DK ++A + + T+P A+ L++ Sbjct: 208 ---------SVYEP---------VMLPSYEDILRDKEVFARSFYTQYVNTDPFTAKCLVE 249 Query: 329 KH--GDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG-NARIPAYEMIRFSVNIMRG 385 + GD YV N PA PLS EMD V+ALPY R HP+Y IPA E ++FS+ RG Sbjct: 250 GYESGD-YVVQNVPAKPLSQSEMDRVYALPYMRDYHPSYEEQGGIPAIEELKFSLTSNRG 308 Query: 386 CFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCK 445 CFGGC+FC++T H+GR+IQ+RS +SI++E + P F G I+D+GGPTAN C+ Sbjct: 309 CFGGCNFCALTFHQGRMIQTRSHESIVSE-ATLLTWDPEFKGYINDVGGPTANFRHTSCE 367 Query: 446 SPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDP 505 + C C++P C ++ +H ++L ++ R+L +KK+ I SG+R+D +ED Sbjct: 368 KQNTKGVCLNKQCLFPKPCSNLKVDHTDYLSLLKKLRELPKVKKVFIRSGIRFDYLIEDK 427 Query: 506 --RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYL 563 ++KEL +HV G LK+APEH + LS M KP Y++F + ++ GK+Q++ Sbjct: 428 DDTFMKELCENHVSGQLKVAPEHISDAVLSMMGKPENSVYEKFITRYKKTNETLGKKQFV 487 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 +PY +S+HPG+ ++ V LA +L+ + +QVQ+FYP+P ST MYYTG +P Sbjct: 488 VPYLMSSHPGSTMKEAVALAEYLRDIGYMPEQVQDFYPTPSTVSTCMYYTGIDPRTM--- 544 Query: 624 KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEE 683 + V+VPK ++ + +AL++Y +P N+ L+ +AL + LIG + CL+ +++ Sbjct: 545 --KPVYVPKSPHEKAMQRALIQYRNPKNYNLVVEALTLANRTDLIGYDKKCLIRPNYMDK 602 Query: 684 MREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAG 728 + R + + + ++ K K SS ++ G Sbjct: 603 DKFGSRPSESGKNSVRKGGARGASNSGDGREKNGSSKGNKGSRGG 647 >UniRef50_C7N5G2 Fe-S oxidoreductase n=54 Tax=cellular organisms RepID=C7N5G2_SLAHD Length = 718 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 259/654 (39%), Positives = 381/654 (58%), Gaps = 69/654 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLPM+ E GWD D + V GDAYVDHPSFGMAI R+LE G++VGIIAQPDW Sbjct: 122 FLPMTMEAARARGWDQVDFVYVCGDAYVDHPSFGMAIITRVLEHAGYKVGIIAQPDWRDP 181 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 G+P L F V++GNMDSM+N YT ++ RH+DA+TP G RP+ A +VY+ Sbjct: 182 ASVSVFGEPRLGFMVSSGNMDSMVNHYTVAKKKRHNDAFTPGGEFGHRPNHAVVVYSNLI 241 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++ +K P+ILGG+EASLRR AHYDYWSD ++RS+L+DS AD++ +G GER +VE+A L Sbjct: 242 RQTYKTTPIILGGVEASLRRLAHYDYWSDKMKRSILMDSGADIISYGMGERSIVEIADAL 301 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 A G +RD+ + +D T T D + Y Sbjct: 302 ASG---LSVRDI--------------TFIDGTVFRT----DSLDEVY------------- 327 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 Y LLPS++ ++ DK+ YA + ++ + +P R L++ Sbjct: 328 ---------------------DYELLPSWDDLQADKLNYARSFKVQYENADPIRGRRLVE 366 Query: 329 KH-GDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNAR-IPAYEMIRFSVNIMRGC 386 + ++ NPP +PL+T EMD V+ALPY R HP+Y +A +PA ++FS+ RGC Sbjct: 367 PYPNHQFAVQNPPTLPLTTAEMDEVYALPYARAWHPSYDDAGGVPALAEVKFSLASNRGC 426 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV--PGFTGVISDLGGPTANMYMLRC 444 FG CSFC++T H+GRI+ +RS +SI+ E RD + P F G I D+GGPTA+ C Sbjct: 427 FGECSFCALTFHQGRIVSARSHESILAEA---RDMIADPDFKGYIHDVGGPTADFRAPAC 483 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAV 502 C+ C+ P ICP M +H ++L R+ R L G+KK+ + SG+R+D +A Sbjct: 484 DKQLKAGACKHRRCMTPHICPRMKVDHSDLVSLLRKLRALPGVKKVFLRSGIRFDYVVAD 543 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 DP +++EL HH+ G L++APEH + L+ M KP Y F L++ + + GK+Q+ Sbjct: 544 SDPTFMRELCRHHISGQLRVAPEHVSDAVLAAMGKPENSVYQEFISLYERENAKTGKKQF 603 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 ++PY +S+HPG+ ++ V LA + + + +QVQ+FYP+P ST MYYTG +P Sbjct: 604 VVPYLMSSHPGSTLKEAVELAEYCRDLGYMPEQVQDFYPTPSTISTCMYYTGVDPRTM-- 661 Query: 623 YKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV 676 E ++ PK + + +AL++Y DP N+ L+ +AL G+ LIG ++CLV Sbjct: 662 ---EPIYTPKSAHDKAMQRALIQYRDPKNYDLVVEALRRAGRTDLIGFGKNCLV 712 >UniRef50_D1N9W5 Radical SAM domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9W5_9BACT Length = 601 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 261/623 (41%), Positives = 355/623 (56%), Gaps = 62/623 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP SR+EM+Q G+D DI+L+TGD YVDHPSFG+AI GR+LE+ G+RVG+IAQPDW Sbjct: 9 FLPTSRKEMEQAGYDELDILLITGDCYVDHPSFGVAIIGRLLESLGYRVGLIAQPDWKDP 68 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + +G+P + GVT+GNMDSM+N YT RRLR DD ++ + GKRP A VY Q Sbjct: 69 EALKIMGRPRIGCGVTSGNMDSMVNIYTVGRRLRKDDCFSENGEIGKRPPHALTVYAQLV 128 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++A+ + V LGG+EAS RR AHYDYW D +R SVL+DSKAD+L++G GERP EV R Sbjct: 129 RQAFPGINVQLGGLEASFRRVAHYDYWQDKIRPSVLIDSKADVLVYGMGERPTPEVYRRW 188 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 A G P+ IR ++ K+A + Sbjct: 189 AEGLPLDGIRG--TARLLGKKAAEAFD--------------------------------- 213 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 PK Q Y+ LPS+E+ DK ++R++ E N R L Q Sbjct: 214 PKDQ------------------YLELPSYEETLADKDALMTSTRMIEAEMNYLGGRGLFQ 255 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 ++GDR V I PP L+ EE+D V LPY R+PHP Y RIPA+E I+ S+ +RGC G Sbjct: 256 RYGDRIVVIEPPPEVLTPEELDKVHELPYARMPHPKY-KGRIPAFETIKDSIQAVRGCPG 314 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GC+FC + H+GR + SRSEDSI+ E++AI D P F G +SD+GG N+Y R R Sbjct: 315 GCAFCGLVVHQGRHVMSRSEDSIMRELDAIADQ-PFFKGTVSDVGGAAGNIYQSRYDLER 373 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 + C+R SC+YP CP+ + L RR +K + I SG+R D+A+ P + Sbjct: 374 CRR-CKRSSCLYPAPCPNYTCTGLEIVRLLRRMSAHPKVKHVYINSGIRLDLALRQPELL 432 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 +EL + HV G+LK+APEH L M K + +F ELF+ SK+ GKEQYLIP FI Sbjct: 433 RELISKHVSGHLKVAPEHLNPEVLKLMRKSSAEEFYKFMELFEKISKECGKEQYLIPLFI 492 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 S PG ++M + +L+KH + L QVQ++ P P+ MYYTGK P ++ Sbjct: 493 SNFPGCSGKEMKTVDDFLEKHHWSLQQVQDYIPLPMTMGAAMYYTGKAP------DGREI 546 Query: 629 FVPKGDKQRRLHKALLRYHDPAN 651 V +G +RR +L+ N Sbjct: 547 VVNRGLAERREQIGVLKKRRSGN 569 >UniRef50_B5YAS7 Radical SAM n=2 Tax=Dictyoglomus RepID=B5YAS7_DICT6 Length = 589 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 254/624 (40%), Positives = 373/624 (59%), Gaps = 61/624 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP++ E + GWD DII+VTGDAYVDHPSFG ++ GR LE GFRVGII QPDW K Sbjct: 6 FLPINLYEAKKRGWDELDIIIVTGDAYVDHPSFGASVIGRYLEYFGFRVGIIPQPDWKDK 65 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + F LGKP LFFG+TAG++DSM+ YT ++ R +DAYTP + GKRPDRAT+VY Sbjct: 66 ESFKVLGKPRLFFGITAGSVDSMVANYTPNKFKRREDAYTPGGLPGKRPDRATIVYANFV 125 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 E + DVP++LGGIEASLRR +HYD+W + VR SVL+D++A ++++G GE+ +++A L Sbjct: 126 HEIFPDVPIVLGGIEASLRRFSHYDFWDNKVRHSVLLDARAKIIVYGMGEKQTLQIAKML 185 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 + G+ EI + + E DT K Sbjct: 186 SEGKSWYEIYQIPGIVFSLGEK----------EFDTFIK--------------------- 214 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 +K Y+LLPSFE+V DK Y R+L + L+Q Sbjct: 215 -------------------DKDYILLPSFEEVSQDKDRYYDFQRLLLEGMKR--KKILVQ 253 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 + G R++ NPP +++++D +++LP+ R+PHP+Y +IPA+E ++ S+ RGCFG Sbjct: 254 RDGKRFIIQNPPP-SYTSQDLDFIYSLPFMRLPHPSY-KEKIPAFETVKTSIVSHRGCFG 311 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 C+FCS+ H+G + SRSE SI+ EI + F G ISD+GGPTANMY LRCK Sbjct: 312 SCTFCSLNLHQGWQVISRSEKSILEEIYRLTKHRE-FRGTISDVGGPTANMYRLRCKIHN 370 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 +C C++PD+C +++ +H +NL ++ ++++ +K + IASG+RYDIA++D YI Sbjct: 371 IPGSCPERDCLFPDVCKYLEVDHSAQLNLLKKIKEIEKVKHVFIASGIRYDIALKDEYYI 430 Query: 509 KELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 E+ ++GG+L APEH ++ L M KP Y+ F ++F+ K+ KE Y+IPYF Sbjct: 431 GEIIKEGYIGGHLSAAPEHVKDHVLEIMKKPKFKVYEEFVDIFERNLKKYRKELYIIPYF 490 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSED 627 ISAHPG +D +LA+++K L+Q+Q++ P PL ++ +YT + L K E Sbjct: 491 ISAHPGATIKDAWDLAMYIKGLGHYLEQIQDYTPLPLTPASCAFYTEYHTLRK-----EK 545 Query: 628 VFVPKGDKQRRLHKALLRYHDPAN 651 ++V K + RRL +AL +Y D N Sbjct: 546 IYVAKTYEDRRLQRALAQYKDKKN 569 >UniRef50_C7LQA1 Radical SAM domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQA1_DESBD Length = 607 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 263/617 (42%), Positives = 358/617 (58%), Gaps = 73/617 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLPM+R EMD LGWD D++LV+GDAYVDHPSF MA+ GR L A G R GII QP W Sbjct: 14 FLPMTRAEMDALGWDELDVLLVSGDAYVDHPSFAMALLGRALVAHGLRTGIITQPRWDGP 73 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 +D + +G+P LF GV+AG +DSM+ YTA R+ R +DAYTP AG RP+RA +VYT Sbjct: 74 EDLLAMGRPRLFAGVSAGAIDSMLAHYTAFRKKRSEDAYTPGGRAGARPNRACIVYTNLL 133 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 + A+ + VILGGIEASLRR HYD+W+D +R+ +L+D+KAD +++G GER ++ +A RL Sbjct: 134 RRAFPGLTVILGGIEASLRRITHYDFWTDALRKPILLDAKADAVVYGMGERAILSIADRL 193 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 A G RD+ L PG + GED P Sbjct: 194 AAG------RDI---------------------LGIPGTVT-----VGEDFPAE------ 215 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 + LPS E + D A+ +L + + G A+ Q Sbjct: 216 -----------------------IELPSHEDMLADPKELMRATLLLEKQVHDGTDWAV-Q 251 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 + +R + + PPA PL+T EMD+++ALP+ R HP Y IPA EMIR SV RGC G Sbjct: 252 RVANRAILVAPPATPLTTTEMDTIYALPFARKAHPGY-LLPIPAEEMIRDSVTSHRGCGG 310 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFC++ H+GR I SRS SI++E+ + + P F G +SD+GGP+ANM+ C + Sbjct: 311 GCSFCTLALHQGRRIASRSRASILDEVRRMAAS-PDFKGHVSDVGGPSANMWGASCA--K 367 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 Q C+R SC+ P +CPH + + ++L R R G++ + +ASGVR+D+A++D + Sbjct: 368 EGQPCKRPSCMTPTVCPHFRMDQKAHLDLLRTLRRTPGVRGVRVASGVRFDLALKDMDAL 427 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 VGG LKIAPEH + L M KPG ++ F +FD SK+AGKEQY+IPY + Sbjct: 428 GGYLREFVGGQLKIAPEHVCDHVLRLMRKPGNRVFEEFLTIFDRESKRAGKEQYVIPYLM 487 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 SA PGT D+DM LA WL ++ QVQ F P P A +T MY+ G P K V Sbjct: 488 SAFPGTTDDDMHALARWLGSRGWKPKQVQCFIPIPGAVATAMYHAGITPEGK------SV 541 Query: 629 FVPKGDKQR-RLHKALL 644 VP+ D++R R H+ LL Sbjct: 542 HVPRTDEERLRQHRILL 558 >UniRef50_Q58555 UPF0313 protein MJ1155 n=4 Tax=Methanocaldococcus RepID=Y1155_METJA Length = 603 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 262/645 (40%), Positives = 379/645 (58%), Gaps = 73/645 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP ++EEMD+ GW+ DII+VTGDAY+DH FG ++ GR L G+RVGIIAQPDW + Sbjct: 2 FLPTTKEEMDEWGWEELDIIIVTGDAYIDHYLFGASVVGRYLVEHGYRVGIIAQPDWKNL 61 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD RLGKPN FF VTAGN+DSM+ YT +RLR D+ + + + KRPDRAT+VYT Sbjct: 62 DDIKRLGKPNYFFAVTAGNLDSMLAHYTPQKRLRDFDSMSNEGIR-KRPDRATIVYTNLI 120 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 K A+K VP+ LGGIEASLRR +HYDYW + VR+SVL+DSKAD+LM+G GE+ ++ + L Sbjct: 121 KRAFKGVPIALGGIEASLRRFSHYDYWDNKVRKSVLIDSKADILMYGMGEKSILAITKAL 180 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GE I ++ ++ T + V E KI I Y Sbjct: 181 ESGENIKDL-EINGTVVRVNER----------------KIGDIKERY------------- 210 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 E K LPS E+V K YA R L + + Q Sbjct: 211 ----ETKE-----------------LPSHEEVVNSKEKYAEMHRKLM-----TMDKVIYQ 244 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 K G++Y+ PP I L+ +EMD ++ +P++R HP+Y + +P ++FSV RGCFG Sbjct: 245 KVGNQYLVQFPP-IYLTEKEMDEIYEMPFERRAHPSY--SYVPGIVPVQFSVVTHRGCFG 301 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFCSI H+G++IQ+RSE SI+ EI + + F GVI D+G PTANMY + CK Sbjct: 302 GCSFCSILHHQGKVIQNRSERSILKEIRKLLNH-EDFKGVIQDIGAPTANMYRMGCKKGL 360 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK-KILIASGVRYDIAVEDPRY 507 A++ + +C+YP+ C ++ NH+P I LYR+ RD+ G ++ + SGVRYD+ + D Y Sbjct: 361 ADRCPK--NCLYPEPCENLIINHKPLIKLYRKIRDIVGDDVRVYVRSGVRYDLIMYDEEY 418 Query: 508 ----IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYL 563 IKEL+ +HV G LK+APEH + + KP + +F E + +++ G + + Sbjct: 419 GEDYIKELSKYHVSGRLKVAPEHISKKVCKAIQKPDGRLFKKFLEKYREIAEKVGGIKEV 478 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 +PY++ AHP ++M+ LA ++ K+ QVQ F P+P+ STTMY+TG NP+ Sbjct: 479 LPYWLIAHPNCSIKEMIELAEFIHKNNCYSRQVQVFTPTPMTLSTTMYHTGINPIT---- 534 Query: 624 KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 +E V+VP +++++ KA+ Y + NW + + +G K +I Sbjct: 535 -NEKVYVPYTYREKKIQKAICLYREEENWEKALEGFKMVGYKGVI 578 >UniRef50_A5IK80 UPF0313 protein Tpet_0582 n=10 Tax=Thermotogaceae RepID=Y582_THEP1 Length = 567 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 247/614 (40%), Positives = 350/614 (57%), Gaps = 70/614 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP +REEM +LGW D+ILVTGDAYVDHPSFG+A+ G L + GF+VGIIAQPDW ++ Sbjct: 2 FLPTTREEMKKLGWRELDVILVTGDAYVDHPSFGVALIGHYLVSHGFKVGIIAQPDWRTE 61 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 D RLG+P LFFGVTAGN+DSM+ YTA ++ R D YTP GKRPDRAT+VYT Sbjct: 62 KDITRLGRPRLFFGVTAGNVDSMVANYTASKKKRKTDDYTPGGSGGKRPDRATIVYTNLI 121 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 K + +VPV+LGG+EASLRR AHYD+WS+ VR+S+L+DSK D+L++G GE+ ++E+A L Sbjct: 122 KRFFPEVPVVLGGLEASLRRFAHYDWWSEKVRKSILIDSKVDLLVYGMGEKAVLEIAQIL 181 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 + I + + VR + G G +LP D Sbjct: 182 SRTGDIEKCKSVRGVVWWSSQKPEG----------------------GIELPSYDEISEN 219 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 P+K YA A ++ T+P + Q Sbjct: 220 PEK-----------------------------------YAEALKLQTWYTDPYKNILIYQ 244 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGCF 387 K RYV NPP +PLS EE+D ++ LP++R HP Y R+ A E ++FS+ +RGCF Sbjct: 245 KQDTRYVVQNPPQLPLSQEELDRLYLLPFEREVHPFYAKMGRVKAIETVKFSITAVRGCF 304 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 G CSFC++T+H+ + RS+DSI+ E+ + F G I+D+GGPTAN+Y C Sbjct: 305 GSCSFCALTQHQTTHVSYRSKDSILEEVRILTKK-KDFKGTITDVGGPTANLYGSSCSIR 363 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAVEDP 505 + C++ C+YP +C + NH+ I+L R + G++ + ++SG+R+D +A +DP Sbjct: 364 ETKGQCQKF-CLYPSVCKIVRPNHDEFISLLESIRKIPGVRNVFVSSGIRHDFVLAEKDP 422 Query: 506 R-YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI 564 +I+EL + G LK+APEH LS M KP + + FK F+T +K+ GK +Y+I Sbjct: 423 DVFIRELV-KYTPGQLKLAPEHAHPKVLSLMRKPPVELFLEFKRRFETLAKKIGKRKYVI 481 Query: 565 PYFISAHPGTRDEDMVNLALWLKKHR-FRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 YFI HPG + L ++ KH + Q+Q F P+P ST MYY+G +P + Sbjct: 482 GYFIVGHPGEGWRENNYLRDFILKHLGYFPQQIQIFTPTPGTVSTAMYYSGLDP-----F 536 Query: 624 KSEDVFVPKGDKQR 637 E V V + K R Sbjct: 537 TGEKVHVERSLKVR 550 >UniRef50_B8DSG7 Radical SAM domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSG7_DESVM Length = 771 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 255/626 (40%), Positives = 367/626 (58%), Gaps = 26/626 (4%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP + EM LGWD D++LV+GDAYVDHP+F MA+ GR L A GFR GI+AQP W Sbjct: 29 FLPTTAREMRDLGWDRLDVLLVSGDAYVDHPTFAMALLGRWLVAHGFRTGIVAQPRWDIP 88 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD R+G+P LF G++AG++DSM+ YTA R+ RHDDA+TP AG RP+RA +VY Sbjct: 89 DDVARMGRPRLFTGISAGSLDSMLAHYTAFRKKRHDDAFTPGGRAGARPNRAAIVYANLA 148 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++A+ +PV+LGGIEASLRR +HYD+W+D +RR +L+D+KAD+L++G GER L++ Sbjct: 149 RQAFPGLPVVLGGIEASLRRISHYDFWTDALRRPILMDAKADLLVWGMGERALLDAT--C 206 Query: 209 AMGEPISEI-RDVRNTAII-----VKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCA 262 A+ + + D + A++ + + +PG + + D G+D P A Sbjct: 207 ALDAAVETVGADAYDAALLPPLAEIFDGIPGTARMGRVTEWDAAPADDAARVTGDD-PDA 265 Query: 263 DNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 D + + A PP P + + LPS + D L A+ +L + G Sbjct: 266 DELSNDGQDEGHTAPGAIPPTPP---ISLMRLPSHAAMAEDPRLLMRATLLLERHVHRGD 322 Query: 323 ARALM---QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 ARA+ R V + PPA PLS +EMD+++ALP+ R HP++ +PA EMIR S Sbjct: 323 ARAIQPVDDTPTARAVLLAPPAPPLSPDEMDALYALPFARRAHPSH-REPVPAEEMIRTS 381 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + RGC GGCSFCS+ H+GR I SRS S+++E + D + F G +SD+GGP+ANM Sbjct: 382 ITTHRGCGGGCSFCSLALHQGRRIASRSRGSVLDEARRLND-MERFNGSVSDVGGPSANM 440 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 + RC A CRR SC++P +CP + + L R R G++ + +ASGVR+D Sbjct: 441 WQARCTLDPAR--CRRASCMHPRVCPGFAVDQSEAVELLRAVRATPGVRHVRVASGVRFD 498 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 +A+ D ++ GG LK+APEH +G L M KPG+ ++RF F +S AGK Sbjct: 499 LALRDADALRAYTMEFTGGQLKVAPEHICDGVLDLMRKPGLAVFERFLTAFADHSTAAGK 558 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQY++PY +SA PG D+DM L+ WL + QVQ F P+P +T M++ G +P Sbjct: 559 EQYVVPYLLSAFPGCTDDDMRTLSRWLAARGWSPRQVQCFIPTPGTVATAMFFAGIDP-- 616 Query: 620 KIGYKSEDVFVPKGDKQR-RLHKALL 644 + V V + D R R H+ L+ Sbjct: 617 ----EGNPVPVARTDAARLRQHRILI 638 >UniRef50_Q729D8 Radical SAM domain protein n=12 Tax=Proteobacteria RepID=Q729D8_DESVH Length = 680 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 238/590 (40%), Positives = 341/590 (57%), Gaps = 53/590 (8%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLPMSR EM +GWD+ D++L++GDAYVDHP+F A+ GR L A G+R GI+AQP W++ Sbjct: 17 FLPMSRAEMHAIGWDALDVLLISGDAYVDHPTFAAALLGRWLVAHGYRTGIVAQPRWNTP 76 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 +D + +G+P LF G+ AG +DSM+ YTA R+ RHDDAYTP AG RP+RA +VYT Sbjct: 77 EDVLCMGRPRLFAGIAAGAIDSMLAHYTAFRKKRHDDAYTPGGKAGARPNRAVIVYTNLL 136 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++A+ +PV++GGIEASLRR HYD+W+D++RRS+L+D+KAD+L++G GE L E A R Sbjct: 137 RQAFAGLPVVIGGIEASLRRATHYDFWTDSLRRSILLDAKADLLVYGMGEYALREAAARY 196 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 ++E + W G +S D+P Sbjct: 197 DAA--MNEGGAATAAEALHGIGGTAWVGTES------------------DMP-------- 228 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 E ++ P S E + D L A+ + G A A+ Q Sbjct: 229 ----EGASIMRLP--------------SHEDISADVRLLMEATLQQERHVHRGDAWAI-Q 269 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 G R V + PPA P+S+E++D ++ALP+ R HP+Y +PA +MIR S+ RGC G Sbjct: 270 PVGSRAVIMAPPAPPMSSEDLDRLYALPFTREAHPSY-RETVPAADMIRTSITTHRGCGG 328 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV-ISDLGGPTANMYMLRCKSP 447 GCSFCS+ H+GR I SRS DS++ E + GV ISD+GGP+ANM+ RC Sbjct: 329 GCSFCSLALHQGRRIASRSRDSVLAEARDLAAAA--RKGVSISDVGGPSANMWQARCTLN 386 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 A+ CRR SC++P +C + + L R RD G++ + +ASGVR+D+A+ + Sbjct: 387 PAK--CRRASCMFPSVCKGFAVDQRKAVRLLREVRDTPGVRNVRVASGVRFDLALREGEA 444 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 ++ GG LK+APEH + L M KPG+ +++F E F +S +AGKEQY++PY Sbjct: 445 LRAYTMEFTGGQLKVAPEHICDEVLEYMRKPGLPVFEKFLEAFAAFSDEAGKEQYVVPYL 504 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 +SA PG D+ M L+ WL+ + QVQ F P+P +T MY G +P Sbjct: 505 LSAFPGCTDDHMRTLSRWLQARGWSPQQVQCFIPTPGTVATAMYAAGIDP 554 >UniRef50_C8QZ53 Radical SAM domain protein n=5 Tax=Deltaproteobacteria RepID=C8QZ53_9DELT Length = 606 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 245/623 (39%), Positives = 358/623 (57%), Gaps = 61/623 (9%) Query: 37 MDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGK 96 M Q GW++ D++LV+GDAY+DHPSFG+A+ GR LEA G+RV I+AQP + DDF+R G+ Sbjct: 1 MHQRGWETVDVVLVSGDAYIDHPSFGLALIGRWLEAHGYRVAILAQPRYDRPDDFLRFGR 60 Query: 97 PNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDN----------VAGKRPDRATLVYTQ 146 P LFFG++AGN+DS++ YT + ++R D Y+PD +RPDRAT++Y Q Sbjct: 61 PRLFFGISAGNLDSIVANYTGNVKVRDRDDYSPDGNPYFGGQAQRRFRRRPDRATIIYAQ 120 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 + + A VP+ILGG+EASLRR HYDY +R SVL D+KAD+L++G GER ++EVA Sbjct: 121 QARRACGQVPIILGGLEASLRRFVHYDYQQRKLRASVLTDAKADLLVYGMGERAVLEVAR 180 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 RL G E L G +G RL TP ++ + Y E +P Sbjct: 181 RLEAG-----------------EHLHGIAGT-CERL-TPAQL--VARGYDESMP------ 213 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 A+A P R P + +LP +E++ DK + A R + + L Sbjct: 214 -------ARASAPDPERAGPAH--FKVLPGYEQIMVDKSHFLAAEREIDRQARARQPAML 264 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC 386 +Q+ +++ +PPA PL EE+D ++ALPY R PHP G R+PA+ M+R SV I+RGC Sbjct: 265 LQRQQAQWLLQHPPAAPLRPEELDRLYALPYARRPHPQAG--RVPAFTMVRDSVTIVRGC 322 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 G C+FC+IT H+G + SRS +SII E+ I P F G I+DLGGPTAN+Y C Sbjct: 323 CGNCAFCAITRHQGGRVVSRSRESIIAEVAQI-AQAPDFRGTITDLGGPTANLYG--CSC 379 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 R ++ C R C+YPD+C + + + + L + A + G++ +L++SG+R ++ ++ PR Sbjct: 380 SRRKEGCSRRDCLYPDVCRELRIDEDTLLELLQAAAAVAGVRHLLVSSGLRMELLLKTPR 439 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ----- 561 ++ L HH G LKIAPEHTE L M KP ++F + F+ + + + Sbjct: 440 LLRRLLEHHTPGTLKIAPEHTEPEVLRLMHKPDGSVLEKFVQTFNRLAAELARRSEKKPP 499 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 L PY ISAHPG M + L+K Q Q+F P+P +T +Y +G +P + Sbjct: 500 TLNPYLISAHPGCTMAHMEEMVRKLQKLNLVPRQFQDFTPTPGTLATAIYVSGLDPAS-- 557 Query: 622 GYKSEDVFVPKGDKQRRLHKALL 644 V VPKGD++RR + +L Sbjct: 558 ---GRPVHVPKGDQERRRQRLVL 577 >UniRef50_B8J3X2 Radical SAM domain protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3X2_DESDA Length = 746 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 270/682 (39%), Positives = 361/682 (52%), Gaps = 91/682 (13%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 F+PMS EEM LGWD D++ VTGDAYVDH SFG + R L GFR GI+AQP W Sbjct: 37 FVPMSVEEMHALGWDCLDVLFVTGDAYVDHSSFGSVLLARWLIHHGFRAGIVAQPRWDKP 96 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD + +G+P LF G++AG +DS++ YTA R+ RHDDAYTP AG RP+RA LVY Sbjct: 97 DDLLVMGRPRLFAGISAGALDSLLAHYTAFRKKRHDDAYTPGGKAGARPNRACLVYANLA 156 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 + A+ +P+ LGGIEASLRR +HYD+W+D++R+ +L+D+KAD+L++G GE +E A RL Sbjct: 157 RRAFPGLPLALGGIEASLRRVSHYDFWTDSLRKPILMDAKADLLIWGMGEYATLEYARRL 216 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 E D R +PG + +D G P P G LP Sbjct: 217 HKAE------DTRG--------IPGTAWLDRLEQTPEG-----PRPAG--LP-------- 247 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 P+ + V LPS E + D V ++ L + + A A Q Sbjct: 248 ---------------PELAQTPAVPLPSHEDILADPVQLLVMTQALERQVHRLDAWAF-Q 291 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 GDR + + PA PL+TEEMD+++ +P+ R PHP+Y IPA EM+R S+ RGC G Sbjct: 292 PVGDRALVLARPAPPLTTEEMDALYEIPFTRRPHPSYREP-IPAAEMMRTSITSHRGCGG 350 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAI-RDTVPGFTG--VISDLGGPTANMYMLRC- 444 GCSFCS+ H+GR I SRSEDSI+ E + ++ + G ISD+GGPTANM+ C Sbjct: 351 GCSFCSLALHQGRRISSRSEDSILAEARRLGQENMERGKGPVAISDVGGPTANMWQGYCA 410 Query: 445 -----------------KSPRAE--------QTCRRLSCVYPDICPHMDTNHEPTINLYR 479 PR++ CRR SC YP IC T + L R Sbjct: 411 LDRMHERGSANRTNPAPAQPRSQAGAEERNTSRCRRTSCCYPTICKFFTTPQGKHVGLLR 470 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 L +K+ IASGVR D+A+ D + GG LK+APEH G LS M KP Sbjct: 471 SVAALPEVKQARIASGVRADLALRDAAALAAYTGEFTGGQLKVAPEHCAPGVLSLMRKPP 530 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + ++ F F SK AG+EQY++PY +S PG D DM LA WL++ + Q Q F Sbjct: 531 LEVFEAFLASFIRQSKAAGREQYVVPYLLSGFPGCTDNDMRTLANWLRERNWNPRQTQCF 590 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQR-RLHKALL--------RYHDPA 650 P+P +T M+Y GKN ED++V + D QR R H L+ R D Sbjct: 591 IPTPGTIATAMFYCGKN------EAGEDIYVARTDAQRLRQHGILMPGRSSAEARRQDRP 644 Query: 651 NWPLIRQALEAMGKKHLIGSRR 672 N P RQ +A +K +R Sbjct: 645 NRP-DRQGKKAAAEKDATAGKR 665 >UniRef50_D1TTB0 Conserved domain protein n=10 Tax=Yersinia RepID=D1TTB0_YERPE Length = 270 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 170/212 (80%), Positives = 186/212 (87%) Query: 516 VGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTR 575 +GGYLKIAPEHTEEGPLSKMMKPGMGSY RFKELFDTYSKQAGKEQYLIPYFISAHPGT Sbjct: 1 MGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTE 60 Query: 576 DEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDK 635 D+DMVNLALWLKK+RFRLDQVQNFYPSPLANSTTMYYTGKNPLAK+ YKSE+V VPKGD+ Sbjct: 61 DKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDR 120 Query: 636 QRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTR 695 QRRLHKALLRYHDPANWP++R ALE MG +HLIG+RR+CLVPAPT+EE REARR R+ Sbjct: 121 QRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHT 180 Query: 696 PALTKHTPMATQRQTPATAKKASSTQSRPVNA 727 PALTKHT + QRQ A AS+ + P A Sbjct: 181 PALTKHTSITRQRQPSNRAPAASAGKKAPTVA 212 >UniRef50_Q3XWG2 Putative uncharacterized protein n=1 Tax=Enterococcus faecium DO RepID=Q3XWG2_ENTFC Length = 161 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 579 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 638 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR Sbjct: 1 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 60 Query: 639 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 698 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL Sbjct: 61 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 120 Query: 699 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 739 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR Sbjct: 121 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 161 >UniRef50_B0TIH7 Radical sam protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TIH7_HELMI Length = 339 Score = 306 bits (783), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 160/339 (47%), Positives = 209/339 (61%), Gaps = 48/339 (14%) Query: 27 APFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWS 86 APFLP+S+ EM++LGWD+CD ILVTGDAYVDHPSFG AI GR+LE +G+RVGII+QPDW Sbjct: 7 APFLPLSKAEMNELGWDACDFILVTGDAYVDHPSFGAAIIGRVLENRGYRVGIISQPDWR 66 Query: 87 SKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQ 146 F LG+P L + VTAGN+DSM+N YTA ++ R +DAY+P AG RPDRA+LVY Sbjct: 67 DLRSFKVLGRPRLAWLVTAGNLDSMVNHYTAAKKRRSEDAYSPGGRAGLRPDRASLVYAH 126 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 RC+EA+K+ P+ILGGIEASLRR AHYDYW D VRRSVLVD+KAD+L+FG GE P+ +A Sbjct: 127 RCREAYKEPPIILGGIEASLRRFAHYDYWEDRVRRSVLVDAKADLLVFGMGEEPITALAE 186 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 L+ E HP G A Sbjct: 187 ELSRRRSGEEFM----------------------------------HPLG-----AKTAG 207 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 V + A+ + P ++LP +++V DK YA A ++ E NP + L Sbjct: 208 VCYLTSDLAAIPGEAP---------IVLPGYDEVASDKWAYAKAFQVQEREQNPVDGKTL 258 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAY 365 Q HG+ ++ N PA PL+T+EMD+++ALP+ R PHP+Y Sbjct: 259 AQPHGELFLVQNRPARPLTTKEMDAIYALPFARRPHPSY 297 >UniRef50_D1J9C3 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9C3_9ARCH Length = 499 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 185/600 (30%), Positives = 313/600 (52%), Gaps = 107/600 (17%) Query: 46 DIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTA 105 +II VTG+ ++DHP G+AI R+LE +G+++G+I +P + +++ +LG+P LFFGV++ Sbjct: 4 EIIFVTGEIFLDHPLCGVAILKRVLEKEGYKIGVIEKP--TKEEEIRKLGRPKLFFGVSS 61 Query: 106 GNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEAS 165 G++DSM+ YT ++ R +D + DRAT V++ K ++ ++LGG EAS Sbjct: 62 GSIDSMVRNYTPLKKSRAEDE--TQDYHEVVLDRATTVFSNWIKHQFRGSILVLGGTEAS 119 Query: 166 LRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAI 225 LRR HYDYW + +R+ +L D++AD++ +GN E+ ++E+A RL P+ +I Sbjct: 120 LRRFVHYDYWQNRLRKPILFDTRADIISYGNSEKQILEIAERLKNDLPLYDI-------- 171 Query: 226 IVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPK 285 PG + +++T + Sbjct: 172 ------PGTCIITKEKVNTAKE-------------------------------------- 187 Query: 286 PWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLS 345 LP++E++ +K + +L TN L+QK +RY+ + + + Sbjct: 188 --------LPNYEELMNEKERFCDMQNML---TN---TEDLIQKIDNRYL-LQYKSPKYT 232 Query: 346 TEEMDSVFALPYKR-VPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQ 404 T+++D + L + R +P G FSV RGC G C+FCS+ +G I Sbjct: 233 TKDLDEYYELKFTRELPKELSG---------FEFSVITHRGCIGDCNFCSVNLIQGDKII 283 Query: 405 SRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDIC 464 SRSE+SI+ EI+AI +P FTG I DLGGP+ANMY + C + SC+ C Sbjct: 284 SRSEESILREIKAI-TKLPHFTGNIDDLGGPSANMYGMDCNKCNS-------SCI---DC 332 Query: 465 PHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP 524 +D +++ + L R+ R ++G+KK+ I SG+R+D+ P YI+E+ +H+ ++IAP Sbjct: 333 NVLDRSNKRMVGLLRKVRKVEGVKKVNIRSGIRFDLTT--PEYIEEITKYHLFNTVRIAP 390 Query: 525 EHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLAL 584 EH + L K+M G +F F +++ L YF++AHPG+ ++ LA Sbjct: 391 EHVNKNVL-KLMNKDKGDLKKFMLEFKKTNRK------LSFYFMTAHPGSTMKEAKELAR 443 Query: 585 WLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL 644 +K+ + + VQ F P+P+ ST MYYTG +P K + ++VP +++ K ++ Sbjct: 444 AIKRLK-NAESVQIFTPTPMTVSTCMYYTGMDPKTK-----KKIYVPYTYSEKKEQKRII 497 >UniRef50_Q8R682 UPF0313 protein FN0734 n=26 Tax=Bacteria RepID=Y734_FUSNN Length = 568 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 142/366 (38%), Positives = 212/366 (57%), Gaps = 12/366 (3%) Query: 285 KPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPL 344 K ++ Y+ LPS + DK + A + +P A+ L QK DRY+ NPP+ Sbjct: 201 KEMKQDYLSLPSHSECLADKDNFIEAFHTFYLNCDPITAKGLCQKCDDRYLIQNPPSESY 260 Query: 345 STEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRII 403 S E MD ++++ + R HP Y + A + I++SV RGC+G C+FC+I H+GR I Sbjct: 261 SEEIMDKIYSMEFARDVHPYYKKMGAVRALDTIKYSVTTHRGCYGECNFCAIAIHQGRTI 320 Query: 404 QSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 SRS+ SI+ E++ I T P F G ISD+GGPTANMY L CK C C+YP Sbjct: 321 MSRSQSSIVEEVKNIAGT-PKFHGNISDVGGPTANMYGLECKKKLKLGACPDRRCLYPKK 379 Query: 464 CPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR----YIKELATHHVGGY 519 C H+ NH + L ++ + + IKKI IASG+RYD+ ++D + Y+KE+ H+ G Sbjct: 380 CLHLQVNHNNQVELLKKLKKIPNIKKIFIASGIRYDMILDDNKCGQMYLKEIIKDHISGQ 439 Query: 520 LKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDM 579 +KIAPEHTE+ L M K G + FK F + + GK+Q+L Y I+AHPG +D+DM Sbjct: 440 MKIAPEHTEDKILGLMGKDGKSCLNEFKNQFYKINNELGKKQFLTYYLIAAHPGCKDKDM 499 Query: 580 VNLALWLKKH-RFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 638 ++L + + R +QVQ F P+P ST MYYT K+P + ++ +FV K + +++ Sbjct: 500 MDLKRYASQELRVNPEQVQIFTPTPSTYSTLMYYTEKDP-----FTNQKLFVEKDNGKKQ 554 Query: 639 LHKALL 644 K ++ Sbjct: 555 KQKDIV 560 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 89/192 (46%), Positives = 128/192 (66%), Gaps = 2/192 (1%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP ++EEM LGWDS D++L++GD Y+D G + G+ L GF+VGIIAQP+ Sbjct: 3 FLPTTKEEMKNLGWDSIDVLLISGDTYLDTSYNGSVLVGKWLVEHGFKVGIIAQPEVDVP 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD RLG+PNLFF V+ G +DSM+ YTA ++ R D +TP V KRPDRA LVY+ Sbjct: 63 DDITRLGEPNLFFAVSGGCVDSMVANYTATKKRRQQDDFTPGGVNNKRPDRAVLVYSNMI 122 Query: 149 KEAWKDVP--VILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 + +K +++ GIE+SLRR HYDYW++ +R+ +L D+KAD+L +G GE ++++A+ Sbjct: 123 RRFFKGTTKKIVISGIESSLRRITHYDYWTNKLRKPILFDAKADILSYGMGEMSMLQLAN 182 Query: 207 RLAMGEPISEIR 218 L GE I+ Sbjct: 183 ALKNGEDWKNIK 194 >UniRef50_UPI0001910DF7 hypothetical protein Salmonellaentericaenterica_48021 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI0001910DF7 Length = 100 Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 95/100 (95%), Positives = 98/100 (98%) Query: 184 LVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLD 243 LVDSKADMLMFGNGERPLVEVAHRLAMGE I +IRDVRNTAI+VKEALPGWSGVDSTRLD Sbjct: 1 LVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDSTRLD 60 Query: 244 TPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPR 283 TPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA+TVQPPR Sbjct: 61 TPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPR 100 >UniRef50_D2YQ88 UPF0313 protein n=1 Tax=Vibrio mimicus VM573 RepID=D2YQ88_VIBMI Length = 211 Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 85/158 (53%), Positives = 103/158 (65%), Gaps = 11/158 (6%) Query: 579 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS-EDVFVPKGDKQR 637 MVNLALWLK + +R DQVQNFYPSP+ N+T MY+ NPL ++ YK E V V KG+ QR Sbjct: 1 MVNLALWLKSNNYRCDQVQNFYPSPMCNATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQR 60 Query: 638 RLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP-----TIEEMREARRQNR 692 RLHKALLRYHDPANWP+IR+AL AMGK+HLIG R +CL+P T + R++ R Sbjct: 61 RLHKALLRYHDPANWPMIREALIAMGKRHLIGDRPECLIPEKDSDLVTPAQSRKSGRHGA 120 Query: 693 NTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAK 730 N TKHT +Q A S Q RP N+G K Sbjct: 121 NR--FATKHT--HSQPGFDALRGNKSGGQGRP-NSGNK 153 >UniRef50_B9TGP5 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TGP5_RICCO Length = 302 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 42/89 (47%), Positives = 58/89 (65%) Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 +A +TTMY++GKNPL K+ SE+V K K R+LHKA LRY+DP NWP++R+ L+ MG Sbjct: 1 MAMATTMYHSGKNPLHKVTEDSEEVLTAKSGKTRKLHKAFLRYYDPENWPVLREGLKRMG 60 Query: 664 KKHLIGSRRDCLVPAPTIEEMREARRQNR 692 + LIG+ LVP E+ +R R Sbjct: 61 RGDLIGNGERHLVPPAGSEQEVAPQRGER 89 >UniRef50_UPI0001C35963 hypothetical protein ChatD1_27829 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35963 Length = 119 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 5/70 (7%) Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 ST MYYTG +P E V+VP ++ + +AL++Y +P N+ L+ +AL+ G+ Sbjct: 4 STCMYYTGYDPRT-----MEKVYVPTNPHEKAMQRALIQYRNPKNYDLVEEALKKAGRTD 58 Query: 667 LIGSRRDCLV 676 LIG + CL+ Sbjct: 59 LIGYDKKCLI 68 >UniRef50_A0LKA1 Radical SAM domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKA1_SYNFM Length = 512 Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%) Query: 357 YKRVPHPAYGNARIPAYEMIRF------SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDS 410 Y+ +P+ N IP +++I F S+ RGC C FC I GR+ +++ Sbjct: 140 YEAGSYPSLDNVPIPRWDLIDFKDYASMSIQFSRGCPFDCEFCDIIVLNGRVPRTKPNGQ 199 Query: 411 IINEIEAIRD 420 +I E++A+ D Sbjct: 200 VIAELDALYD 209 >UniRef50_B8D5M7 RNA modification enzyme, MiaB family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D5M7_DESK1 Length = 432 Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Query: 382 IMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE-AIRDTVPGFTGVISDLGGPTANMY 440 I GC CSFC IT+H RI+ S D+++ +E A+R+ DLG ++Y Sbjct: 141 IQEGCLSNCSFC-ITKHARRILVSHGIDAVVKAVERAVRNGAVEIQLTGMDLGTYGLDLY 199 Query: 441 MLRCKSPRAEQTCRRLSCVY 460 R ++ RR+S Y Sbjct: 200 KTRKLPELVKEVSRRVSGEY 219 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q7MJL8 UPF0313 protein VV2143 n=280 Tax=root RepID=Y214... 1084 0.0 UniRef50_A1W831 Radical SAM N-terminal domain protein n=58 Tax=c... 1037 0.0 UniRef50_Q128Y3 Radical SAM n=6 Tax=Bacteria RepID=Q128Y3_POLSJ 1034 0.0 UniRef50_P61405 UPF0313 protein RPA0679 n=29 Tax=Bacteria RepID=... 994 0.0 UniRef50_Q08XF0 Radical SAM n=3 Tax=Bacteria RepID=Q08XF0_STIAU 947 0.0 UniRef50_D2QYA0 Radical SAM domain protein n=1 Tax=Pirellula sta... 934 0.0 UniRef50_Q0STL9 UPF0313 protein CPR_1216 n=60 Tax=cellular organ... 933 0.0 UniRef50_A9KIV0 Radical SAM domain protein n=5 Tax=Clostridiales... 911 0.0 UniRef50_Q8THA2 UPF0313 protein MA_4618 n=6 Tax=Archaea RepID=Y4... 904 0.0 UniRef50_D1P9M1 Radical SAM domain protein n=1 Tax=Prevotella co... 897 0.0 UniRef50_C9MQP2 Radical SAM domain protein n=4 Tax=Prevotella Re... 892 0.0 UniRef50_A1ALG7 UPF0313 protein Ppro_0556 n=9 Tax=Desulfuromonad... 872 0.0 UniRef50_A7IB47 Radical SAM N-terminal domain protein n=7 Tax=ce... 871 0.0 UniRef50_C9KPY8 Radical SAM domain protein n=1 Tax=Mitsuokella m... 867 0.0 UniRef50_A7H6E2 Radical SAM domain protein n=4 Tax=Anaeromyxobac... 854 0.0 UniRef50_C7N5G2 Fe-S oxidoreductase n=54 Tax=cellular organisms ... 852 0.0 UniRef50_P61404 UPF0313 protein GSU2873 n=8 Tax=Proteobacteria R... 848 0.0 UniRef50_C9RQ46 Radical SAM domain protein n=28 Tax=Bacteria Rep... 838 0.0 UniRef50_B5YAS7 Radical SAM n=2 Tax=Dictyoglomus RepID=B5YAS7_DICT6 828 0.0 UniRef50_Q58555 UPF0313 protein MJ1155 n=4 Tax=Methanocaldococcu... 808 0.0 UniRef50_Q7MVU9 UPF0313 protein PG_0934 n=25 Tax=Bacteria RepID=... 801 0.0 UniRef50_B8DSG7 Radical SAM domain protein n=1 Tax=Desulfovibrio... 799 0.0 UniRef50_A5IK80 UPF0313 protein Tpet_0582 n=10 Tax=Thermotogacea... 794 0.0 UniRef50_C7LQA1 Radical SAM domain protein n=1 Tax=Desulfomicrob... 790 0.0 UniRef50_Q729D8 Radical SAM domain protein n=12 Tax=Proteobacter... 784 0.0 UniRef50_B8J3X2 Radical SAM domain protein n=1 Tax=Desulfovibrio... 766 0.0 UniRef50_D1N9W5 Radical SAM domain protein n=1 Tax=Victivallis v... 766 0.0 UniRef50_C8QZ53 Radical SAM domain protein n=5 Tax=Deltaproteoba... 706 0.0 UniRef50_B0VIP9 Radical SAM domain protein n=1 Tax=Candidatus Cl... 689 0.0 UniRef50_Q8R682 UPF0313 protein FN0734 n=26 Tax=Bacteria RepID=Y... 664 0.0 UniRef50_D1J9C3 Putative uncharacterized protein n=1 Tax=uncultu... 614 e-174 UniRef50_B0TIH7 Radical sam protein, putative n=1 Tax=Heliobacte... 434 e-120 UniRef50_D1TTB0 Conserved domain protein n=10 Tax=Yersinia RepID... 307 9e-82 UniRef50_Q3XWG2 Putative uncharacterized protein n=1 Tax=Enteroc... 229 2e-58 UniRef50_D2YQ88 UPF0313 protein n=1 Tax=Vibrio mimicus VM573 Rep... 180 2e-43 UniRef50_UPI0001910DF7 hypothetical protein Salmonellaentericaen... 121 8e-26 UniRef50_B9TGP5 Putative uncharacterized protein (Fragment) n=1 ... 116 3e-24 UniRef50_UPI0001C35963 hypothetical protein ChatD1_27829 n=1 Tax... 100 2e-19 Sequences not found previously or not previously below threshold: UniRef50_O27239 Phosphonoacetaldehyde methylase n=1 Tax=Methanot... 78 1e-12 UniRef50_Q8TX78 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyr... 74 2e-11 UniRef50_Q2FRN7 Radical SAM n=3 Tax=Methanomicrobia RepID=Q2FRN7... 73 5e-11 UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO... 72 1e-10 UniRef50_Q8TX87 Fe-S oxidoreductase family protein n=1 Tax=Metha... 71 2e-10 UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bact... 66 6e-09 UniRef50_Q58275 Putative methylthiotransferase MJ0865 n=11 Tax=M... 65 1e-08 UniRef50_A7H5G3 Ribosomal protein S12 methylthiotransferase rimO... 65 1e-08 UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Cal... 64 2e-08 UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransfer... 63 4e-08 UniRef50_B0SGD8 Ribosomal protein S12 methylthiotransferase rimO... 63 5e-08 UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Vic... 63 5e-08 UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 62 1e-07 UniRef50_C5CDI9 MiaB-like tRNA modifying enzyme n=1 Tax=Kosmotog... 61 1e-07 UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransfer... 61 2e-07 UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=... 60 2e-07 UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO... 60 2e-07 UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bactero... 60 3e-07 UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO... 60 3e-07 UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 60 5e-07 UniRef50_B8F9C5 Radical SAM domain protein n=1 Tax=Desulfatibaci... 59 6e-07 UniRef50_B8GFG5 Radical SAM domain protein n=1 Tax=Methanosphaer... 59 7e-07 UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Aci... 59 8e-07 UniRef50_C6M658 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 59 9e-07 UniRef50_A0LV11 Ribosomal protein S12 methylthiotransferase rimO... 58 1e-06 UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 58 1e-06 UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 58 1e-06 UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 57 2e-06 UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bac... 57 2e-06 UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotran... 57 2e-06 UniRef50_Q1PVH8 Putative uncharacterized protein n=1 Tax=Candida... 57 3e-06 UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 57 3e-06 UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sph... 57 3e-06 UniRef50_D2AXY5 RNA modification enzyme, MiaB-family n=1 Tax=Str... 57 4e-06 UniRef50_A7H335 MiaB-like tRNA modifying enzyme n=16 Tax=Campylo... 56 5e-06 UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 56 5e-06 UniRef50_Q9WZT7 Putative methylthiotransferase TM_0830 n=6 Tax=T... 56 5e-06 UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 ... 56 6e-06 UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransfer... 55 7e-06 UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicu... 55 8e-06 UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmati... 55 8e-06 UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 55 9e-06 UniRef50_A5G7K0 Radical SAM domain protein n=2 Tax=Geobacter Rep... 55 9e-06 UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO... 55 9e-06 UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mit... 55 1e-05 UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collins... 55 1e-05 UniRef50_A8ZVQ2 Radical SAM domain protein n=4 Tax=Desulfococcus... 55 1e-05 UniRef50_C2KX45 2-methylthioadenine synthase n=2 Tax=Lachnospira... 55 1e-05 UniRef50_A8TGG3 Radical SAM domain protein n=1 Tax=Methanococcus... 55 1e-05 UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO... 55 1e-05 UniRef50_B9KG42 MiaB-like tRNA modifying enzyme n=15 Tax=Epsilon... 54 2e-05 UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO... 54 2e-05 UniRef50_A5UK62 Anaerobic magnesium-protoporphyrin IX monomethyl... 54 2e-05 UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO... 54 2e-05 UniRef50_A9KIR0 Radical SAM domain protein n=1 Tax=Clostridium p... 54 2e-05 UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO... 54 2e-05 UniRef50_Q7NRB8 Putative uncharacterized protein n=1 Tax=Chromob... 54 2e-05 UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransfer... 54 3e-05 UniRef50_Q0RDV0 Ribosomal protein S12 methylthiotransferase rimO... 53 4e-05 UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 53 4e-05 UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO... 53 5e-05 UniRef50_B8FY82 Cobalamin B12-binding domain protein n=4 Tax=Bac... 53 5e-05 UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=... 53 6e-05 UniRef50_B6ADR0 Radical SAM domain-containing protein n=1 Tax=Cr... 52 7e-05 UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransfer... 52 7e-05 UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dic... 52 7e-05 UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO... 52 7e-05 UniRef50_Q1ISQ8 Fe-S protein, radical SAM family n=1 Tax=Candida... 52 9e-05 UniRef50_A8A9E9 Radical SAM domain protein n=1 Tax=Ignicoccus ho... 52 9e-05 UniRef50_A1RSC3 Radical SAM domain protein n=6 Tax=cellular orga... 52 9e-05 UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP... 52 1e-04 UniRef50_C6PBV1 Radical SAM domain protein n=1 Tax=Thermoanaerob... 52 1e-04 UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransfer... 52 1e-04 UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoni... 52 1e-04 UniRef50_D0RQJ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 51 1e-04 UniRef50_B8FE11 Radical SAM domain protein n=1 Tax=Desulfatibaci... 51 1e-04 UniRef50_C7IJC0 Radical SAM domain protein n=1 Tax=Clostridium p... 51 2e-04 UniRef50_C5UZW6 Radical SAM domain protein n=1 Tax=Gallionella f... 51 2e-04 UniRef50_B4S6S9 Radical SAM domain protein n=1 Tax=Prosthecochlo... 51 2e-04 UniRef50_D2RHE6 Radical SAM domain protein n=2 Tax=Archaeoglobac... 50 3e-04 UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=C... 50 3e-04 UniRef50_C5ZWL4 2-methylthioadenine synthetase n=4 Tax=Helicobac... 50 3e-04 UniRef50_A6LBP0 Fe-S oxidoreductase n=4 Tax=Bacteroidales RepID=... 50 4e-04 UniRef50_Q0YRQ9 Cobalamin B12-binding:Radical SAM n=1 Tax=Chloro... 50 4e-04 UniRef50_A8J945 Predicted protein (Fragment) n=1 Tax=Chlamydomon... 50 4e-04 UniRef50_C9M8F1 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Jo... 50 4e-04 UniRef50_C6HZ25 Radical SAM domain protein n=3 Tax=Leptospirillu... 50 5e-04 UniRef50_Q01V42 Radical SAM domain protein n=1 Tax=Candidatus So... 49 5e-04 UniRef50_Q2SXQ0 Radical SAM domain protein n=83 Tax=Bacteria Rep... 49 5e-04 UniRef50_Q0W344 Putative 2-methylthioadenine synthetase n=1 Tax=... 49 6e-04 UniRef50_A0B5M5 Radical SAM domain protein n=1 Tax=Methanosaeta ... 49 7e-04 UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase... 49 8e-04 UniRef50_A7VVQ8 Putative uncharacterized protein n=1 Tax=Clostri... 49 8e-04 UniRef50_B3E8M2 Radical SAM domain protein n=1 Tax=Geobacter lov... 48 0.001 UniRef50_O29021 Putative methylthiotransferase AF_1247 n=3 Tax=A... 48 0.001 UniRef50_A8F7Z2 Radical SAM domain protein n=7 Tax=Thermotogacea... 48 0.001 UniRef50_Q01S25 Radical SAM domain protein n=2 Tax=Acidobacteria... 48 0.001 UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genom... 48 0.002 UniRef50_B3E950 Radical SAM domain protein n=1 Tax=Geobacter lov... 48 0.002 UniRef50_Q01UE2 Radical SAM domain protein n=1 Tax=Candidatus So... 47 0.002 UniRef50_Q39UZ3 Cobalamin B12-binding/Radical SAM n=3 Tax=Geobac... 47 0.002 UniRef50_C5BNS4 Radical SAM domain protein n=1 Tax=Teredinibacte... 47 0.003 UniRef50_Q12Q22 Radical SAM n=1 Tax=Shewanella denitrificans OS2... 47 0.003 UniRef50_A8F7Y7 Radical SAM domain protein n=1 Tax=Thermotoga le... 47 0.004 UniRef50_B8CXT9 Radical SAM domain protein n=1 Tax=Halothermothr... 47 0.004 UniRef50_A3MVB8 RNA modification enzyme, MiaB family n=6 Tax=The... 47 0.004 UniRef50_C6E4U3 Radical SAM domain protein n=3 Tax=Geobacter Rep... 46 0.004 UniRef50_A0LKA1 Radical SAM domain protein n=1 Tax=Syntrophobact... 46 0.004 UniRef50_A5FSG0 Radical SAM domain protein n=5 Tax=Dehalococcoid... 46 0.004 UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms... 46 0.005 UniRef50_A5G7J7 Radical SAM domain protein n=5 Tax=Geobacter Rep... 46 0.005 UniRef50_B8FIB9 Radical SAM domain protein n=1 Tax=Desulfatibaci... 46 0.005 UniRef50_C9RB59 Radical SAM domain protein n=1 Tax=Ammonifex deg... 46 0.006 UniRef50_C7ILM4 Radical SAM domain protein n=1 Tax=Clostridium p... 46 0.006 UniRef50_C6P4U0 Radical SAM domain protein n=1 Tax=Sideroxydans ... 46 0.006 UniRef50_UPI0001C420FF magnesium-protoporphyrin IX monomethyl es... 45 0.007 UniRef50_A8ZVN3 Radical SAM domain protein n=1 Tax=Desulfococcus... 45 0.008 UniRef50_B8D4E5 Radical SAM domain protein n=1 Tax=Desulfurococc... 45 0.008 UniRef50_Q0W7F7 Predicted Fe-S cluster-binding oxidoreductase n=... 45 0.010 UniRef50_D0LTF7 Fe-S oxidoreductase-like protein n=2 Tax=Myxococ... 45 0.010 UniRef50_D1U7N0 Radical SAM domain protein n=1 Tax=Desulfovibrio... 45 0.011 UniRef50_C9S847 THO complex subunit 2 n=1 Tax=Verticillium albo-... 45 0.012 UniRef50_C6CW91 Radical SAM domain protein n=19 Tax=Bacillales R... 45 0.013 UniRef50_D2LDW7 Radical SAM domain protein n=1 Tax=Rhodomicrobiu... 45 0.015 UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 45 0.015 UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO... 44 0.018 UniRef50_Q6AM43 Related to methyltransferase n=3 Tax=Deltaproteo... 44 0.019 UniRef50_Q8TWF4 2-methylthioadenine synthetase n=1 Tax=Methanopy... 44 0.019 UniRef50_C5RLU0 Radical SAM domain protein n=1 Tax=Clostridium c... 44 0.019 UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 44 0.020 UniRef50_A4KVE1 Probable coenzyme B12-binding/radical SAM n=1 Ta... 44 0.022 UniRef50_C4XKJ3 Cobalamin vitamin B12-binding domain/radical SAM... 43 0.033 UniRef50_Q9YCV4 Putative uncharacterized protein n=1 Tax=Aeropyr... 43 0.034 UniRef50_B3T4U0 Putative uncharacterized protein n=1 Tax=uncultu... 43 0.039 >UniRef50_Q7MJL8 UPF0313 protein VV2143 n=280 Tax=root RepID=Y2143_VIBVY Length = 768 Score = 1084 bits (2804), Expect = 0.0, Method: Composition-based stats. Identities = 478/732 (65%), Positives = 569/732 (77%), Gaps = 15/732 (2%) Query: 15 SWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQG 74 + +YWA CFG APFLP SR+EMD LGWDSCDI+LVTGDAYVDHPSFGMAI GR+LEAQG Sbjct: 10 THKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAIIGRLLEAQG 69 Query: 75 FRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAG 134 FRVGIIAQP W K DFM LGKPNLFFGVT+GNMDSMINRYT+DR+LRHDDAYTP+N G Sbjct: 70 FRVGIIAQPQWQDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDDAYTPNNEGG 129 Query: 135 KRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMF 194 KRPDRATLVY+QRC+EA+KDVP++LGGIEASLRR AHYDYWSD VRRSVL+D+KAD+L+F Sbjct: 130 KRPDRATLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSVLLDAKADILLF 189 Query: 195 GNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHP 254 GN ER LVEVAHRLA GE I+++ ++R TA+ + G++ +DS+R++ P K IP Sbjct: 190 GNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKPRKEAFIPPN 249 Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRIL 314 E + K PK Q P T V LPSFEK++ D++LYAHASRIL Sbjct: 250 PYEVETQCETKSEEPKAQ----PITIRPSRHDAATTAVRLPSFEKLQNDRILYAHASRIL 305 Query: 315 HHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYE 374 H ETNP RAL+Q+HG+R +W+N IPL+TEEMD VF LPY RVPHP YG A+IPAY+ Sbjct: 306 HLETNPYSGRALIQRHGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAKIPAYD 365 Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 MI+ SVNIMRGCFGGCSFCSITEHEGRIIQ+RS++SI+ E+E IRD VPGFTG ISDLGG Sbjct: 366 MIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESILTELEEIRDKVPGFTGTISDLGG 425 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 PTANMY L C P+AE CRR SCV+P IC ++T+H+ TI+LYR AR +KG+KK++IAS Sbjct: 426 PTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKKVMIAS 485 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 GVRYD+A+E P Y+KEL THHVGGYLKIAPEHTE+GPL MMKPGMG+YDRFKE+FD YS Sbjct: 486 GVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFDKYS 545 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 ++AGK+QYLIPYFISAHPGT DEDM+NLALWLKK+ + DQVQNFYPSP+ N+T+MYY+ Sbjct: 546 QEAGKKQYLIPYFISAHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATSMYYSE 605 Query: 615 KNPLAKIGYKS-EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 NPL ++ YK EDV V KGD+QRRLHKALLRYHDPANWPLIR+AL MGKK+LIG + Sbjct: 606 TNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHDPANWPLIREALITMGKKYLIGDKPG 665 Query: 674 CLVPAPTIEEMREARRQNRNTRPAL---TKHTPMATQRQTPATAKKASSTQSRPVNAG-- 728 CLVPA ++ A+R+ A TKHT +TQ P A S + +P G Sbjct: 666 CLVPAEDVDARTPAQRRKSGRHGANRFATKHT--STQPGFPGDKANAGSGK-KPTRGGQS 722 Query: 729 --AKKRPKAAVG 738 A R +A G Sbjct: 723 NSAPSRSGSATG 734 >UniRef50_A1W831 Radical SAM N-terminal domain protein n=58 Tax=cellular organisms RepID=A1W831_ACISJ Length = 847 Score = 1037 bits (2681), Expect = 0.0, Method: Composition-based stats. Identities = 445/733 (60%), Positives = 550/733 (75%), Gaps = 49/733 (6%) Query: 11 RDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRML 70 + L S+ YWA FG AP+LPMSR EM+QLGWDSCD++LVTGDAYVDHPSFGMA+ GR+L Sbjct: 15 KPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYVDHPSFGMAVIGRVL 74 Query: 71 EAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPD 130 EAQGFRVGIIAQPDW S D F LGKPNLF+GVTAGNMDSMINRYTADR++R DDAYTP Sbjct: 75 EAQGFRVGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTPG 134 Query: 131 NVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKAD 190 +V GKRPDRA +VY+QRC+EA+KDVP++LGGIE SLRR AHYDYWSD VRRS++VDSK D Sbjct: 135 DVGGKRPDRAAVVYSQRCREAYKDVPIVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCD 194 Query: 191 MLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDP 250 +L+FGN ER LVEVAHR+A +P+ I DVR TA + + + PGW +DST +D PG++D Sbjct: 195 ILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFEIDSTEVDEPGRVDE 254 Query: 251 IPHPY--------GEDLPCADNKPVAP-------------KKQEAKAVTVQPPRP----- 284 + +PY + C+ K + + P P Sbjct: 255 LINPYMTTSEQAAAQGQTCSQEDAANSIAASADPQSAAGQKPLQTVQIVPNPALPSKGRS 314 Query: 285 ----KPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGD----RYVW 336 P E+T + LPS+E+VK D VLYAHA+R+LH ETNPG ARAL+Q HG+ R VW Sbjct: 315 GRALPPRERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVW 374 Query: 337 INPPAIPLSTEEMDSVFALPYKRVPHPAY--------GNARIPAYEMIRFSVNIMRGCFG 388 +NPP +PL+T EMD VF LPY R PHP Y G +IPA+EMIR S+NIMRGCFG Sbjct: 375 LNPPPVPLTTAEMDWVFGLPYARNPHPQYLDAQGSYEGPTKIPAWEMIRASINIMRGCFG 434 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GC+FCSITEHEGRIIQSRSEDSII E+E IRD V GFTG ISDLGGPTANMY L CKSP Sbjct: 435 GCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGGPTANMYRLGCKSPE 494 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 E CR+ SCV+P IC ++ T+H P +N+YRRAR L GIKKILI SG+RYD+AV+ P Y+ Sbjct: 495 IEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGSGLRYDLAVKSPEYV 554 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 KEL HHVGGYLKIAPEHTE GPLSKMMKPG+G+YDRFK++F+ Y+++AGK+Q+LIPYFI Sbjct: 555 KELVQHHVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTEEAGKKQFLIPYFI 614 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS--- 625 +AHPGT DEDM+NLA+WLKK+ FR DQVQ FYPSP+A++T MY++G+NPL ++ + Sbjct: 615 AAHPGTTDEDMLNLAIWLKKNGFRADQVQAFYPSPMASATAMYHSGRNPLTRVRRQMRDV 674 Query: 626 --EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PTI 681 E V V +G+K+RRLHKA LRYHDP NWPL+R+AL++MG+ LIG+ + L+P P + Sbjct: 675 AEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIGNGKHHLIPTFQPLV 734 Query: 682 EEMREARRQNRNT 694 + ++ R+ +T Sbjct: 735 DGSYQSARKKNST 747 >UniRef50_Q128Y3 Radical SAM n=6 Tax=Bacteria RepID=Q128Y3_POLSJ Length = 831 Score = 1034 bits (2673), Expect = 0.0, Method: Composition-based stats. Identities = 464/817 (56%), Positives = 561/817 (68%), Gaps = 98/817 (11%) Query: 11 RDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRML 70 + L S+ +YWAA FG A FLP SR EM+ LGWDSCDII+VTGDAYVDHPSFGMA+ GRML Sbjct: 15 KPLTSYRKYWAARFGTAKFLPTSRAEMEALGWDSCDIIIVTGDAYVDHPSFGMAVIGRML 74 Query: 71 EAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPD 130 EAQGFRVGIIAQP+W S D F LGKPNLFFGVTAGNMDSMINRYTAD ++R DDAYTP Sbjct: 75 EAQGFRVGIIAQPEWQSADPFRVLGKPNLFFGVTAGNMDSMINRYTADHKIRSDDAYTPG 134 Query: 131 NVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKAD 190 +V GKRPDRA LVY+QRCKEA+KDVP+ILGGIE SLRR AHYDYWSD VRRS++VDSK D Sbjct: 135 DVGGKRPDRAALVYSQRCKEAYKDVPIILGGIEGSLRRIAHYDYWSDKVRRSIVVDSKCD 194 Query: 191 MLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVK---EALPGWSGVDSTRLDTPGK 247 +L++GN ER +VE+AHRLA EP++ + D+R TA I + E GW +DST +DTPG+ Sbjct: 195 LLLYGNAERAIVEIAHRLAAREPVATMTDIRGTAFIRRSGDETAQGWFEIDSTNVDTPGR 254 Query: 248 IDP--------------------------------------IPHPYGEDLPCADNKP--V 267 ++ +P P GE KP V Sbjct: 255 VEAHVNPYLMISEQAKEQGATCAREDEAADVAAQAEKDAALLPRPQGEGRGEGATKPLQV 314 Query: 268 APKKQEAKAVTVQPPRP-----------------------------------KPWEKTYV 292 A + A P P P +++ + Sbjct: 315 ASDARTAFKANAGSPHPDPLPGGEGIKANPAIKPLTFVPNPSLSHMQGKIKVPPRDRSVI 374 Query: 293 LLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGD----RYVWINPPAIPLSTEE 348 LPS+E+VK D VLYAHA+R+LH ETNPG ARAL+Q HG+ R VWINPP IPL+T E Sbjct: 375 RLPSYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWINPPPIPLTTAE 434 Query: 349 MDSVFALPYKRVPHPAYGNA--------RIPAYEMIRFSVNIMRGCFGGCSFCSITEHEG 400 MD VF LPY R PHP Y + +IPA+EMIRFSVNIMRGCFGGC+FCSITEHEG Sbjct: 435 MDYVFDLPYARSPHPIYADENGSHDHATKIPAWEMIRFSVNIMRGCFGGCTFCSITEHEG 494 Query: 401 RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVY 460 RIIQSRSEDS+I EIEAIRDTV GFTG ISDLGGPTANMY + CKSP E CR+ SCVY Sbjct: 495 RIIQSRSEDSVIREIEAIRDTVKGFTGAISDLGGPTANMYRIGCKSPEIEAACRKPSCVY 554 Query: 461 PDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYL 520 P IC +++TNH P I +YRRAR LKG+KKILI+SG+RYD+AV+ P Y+KEL THHVGGYL Sbjct: 555 PGICSNLNTNHNPLIKMYRRARALKGVKKILISSGLRYDLAVQSPEYVKELVTHHVGGYL 614 Query: 521 KIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMV 580 KIAPEHTE+GPL+KMMKPG+GSYD+FK++F+ YS +AGK+Q+LIPYFI+AHPGT DEDM+ Sbjct: 615 KIAPEHTEQGPLTKMMKPGIGSYDKFKQMFEKYSLEAGKKQFLIPYFIAAHPGTSDEDMM 674 Query: 581 NLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLH 640 NLA+WLKK+ FR DQVQ FYPSP+A +T MY+T KNPL KI SE V + +G+++RRLH Sbjct: 675 NLAIWLKKNGFRADQVQTFYPSPMATATAMYHTNKNPLRKITRDSETVDIVRGERRRRLH 734 Query: 641 KALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PTIEEMREARRQNRNTRPAL 698 KA LRYHDP NWP++R+AL+AMG+ LIG+ + L+P P + ++ R+ +T L Sbjct: 735 KAFLRYHDPNNWPVLREALKAMGRADLIGNGKHHLIPTFQPLTDGSYQSARRKNSTTVVL 794 Query: 699 TKHTPMATQ------RQTPATAKKASSTQSRPVNAGA 729 TP+ + P PV Sbjct: 795 KTPTPVKGRILTQHTGLPPRDNGSGKPGGKPPVRKAR 831 >UniRef50_P61405 UPF0313 protein RPA0679 n=29 Tax=Bacteria RepID=Y679_RHOPA Length = 677 Score = 994 bits (2571), Expect = 0.0, Method: Composition-based stats. Identities = 424/688 (61%), Positives = 515/688 (74%), Gaps = 36/688 (5%) Query: 21 AACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII 80 AA PAPFLPMSR EMD+LGWD+CDI+LVTGDAYVDHPSFGMAI GR+LE+QGFRVGII Sbjct: 19 AAPRKPAPFLPMSRAEMDKLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLESQGFRVGII 78 Query: 81 AQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRA 140 +QPDW S + F LGKP +FFGVT GNMDSM+NRYTADRRLRHDDAYTP+ GKRPDR Sbjct: 79 SQPDWQSAEPFKALGKPRVFFGVTGGNMDSMVNRYTADRRLRHDDAYTPNGEGGKRPDRC 138 Query: 141 TLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERP 200 TLVY QRC+EA+KDVP+ILGGIEASLRR AHYDYWSD VRRSVL D+KAD+L++GN ER Sbjct: 139 TLVYAQRCREAFKDVPIILGGIEASLRRIAHYDYWSDKVRRSVLADAKADLLLYGNAERA 198 Query: 201 LVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLP 260 ++EVAHRLA GE E+ D+R A+ + + + +DL Sbjct: 199 VIEVAHRLAAGEAPRELEDIRGVALFRRV------------------PENTIELHADDLD 240 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP 320 AD + + LPS E+V+ DK YA ASR+LH E+NP Sbjct: 241 AADEGARQVRG-----------------DVVIRLPSCEQVEQDKEAYARASRVLHRESNP 283 Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSV 380 G AR L+Q+HGDR +W+NPP IPL+TEEMDSV+ LPY R PHP+YGNA+IPA++MI+ SV Sbjct: 284 GNARPLVQRHGDRDLWLNPPPIPLTTEEMDSVYDLPYARAPHPSYGNAKIPAWDMIKTSV 343 Query: 381 NIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMY 440 IMRGCFGGC+FCSITEHEGRIIQSRSE SI+ EIE IRD PGFTGVISD+GGPTANMY Sbjct: 344 TIMRGCFGGCTFCSITEHEGRIIQSRSEASILQEIEKIRDKTPGFTGVISDIGGPTANMY 403 Query: 441 MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDI 500 + CK E +CR+ SCV+PDICP+++T+H+ I LYR+ R++KGIK++++ASGVRYD+ Sbjct: 404 RMACKDSNIESSCRKPSCVFPDICPNLNTSHDDLIRLYRKVREVKGIKRVMVASGVRYDL 463 Query: 501 AVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE 560 AV+ P YIKEL +HHVGGYLKIAPEHTE GPL KMMKPG+G+Y RFK++F+ +KQAGK+ Sbjct: 464 AVKSPAYIKELVSHHVGGYLKIAPEHTERGPLDKMMKPGIGTYHRFKQMFEAAAKQAGKQ 523 Query: 561 QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAK 620 YLIPYFI+AHPGT DEDM+NLALWLK++R+R DQVQ F PSP+A +T MY++G NPL Sbjct: 524 YYLIPYFIAAHPGTTDEDMMNLALWLKRNRYRADQVQTFLPSPMATATAMYHSGVNPLRG 583 Query: 621 IGY-KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 + + SE V KG +QRRLHKA LRYHDP NWP++R+AL+AMG+ LIGSR D LVPA Sbjct: 584 VRHGASEPVEAIKGLRQRRLHKAFLRYHDPDNWPVLREALKAMGRADLIGSRPDQLVPAH 643 Query: 680 TIEEMREARRQNRNTRPALTKHTPMATQ 707 +A R R K T+ Sbjct: 644 QPPGTGKAAGTRRPVRGDGPKPQRFTTK 671 >UniRef50_Q08XF0 Radical SAM n=3 Tax=Bacteria RepID=Q08XF0_STIAU Length = 636 Score = 947 bits (2449), Expect = 0.0, Method: Composition-based stats. Identities = 342/660 (51%), Positives = 442/660 (66%), Gaps = 57/660 (8%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 PFLP +R +M+ GW+ DII+V+GDAYVDHP+FG + R LE +GF+VG+IAQPDW S Sbjct: 10 PFLPTTRADMEARGWEQLDIIIVSGDAYVDHPAFGPVLIARFLEGRGFKVGLIAQPDWHS 69 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 + F LGKP LFFGV AGN+DSM+NR TA ++ R +D Y+P RPDRAT+VY QR Sbjct: 70 AEPFKVLGKPRLFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGRTNCRPDRATIVYGQR 129 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 C+EA+ DVP+ILGGIEASLRR AHYDYWSD +RRS+L D+KAD+L+FG GERP+ EVA R Sbjct: 130 CREAYPDVPIILGGIEASLRRIAHYDYWSDKLRRSILFDAKADLLIFGMGERPVWEVADR 189 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 + GE I +IRDVR TA ++ +A D Sbjct: 190 MNRGESIEQIRDVRGTAYLINDAEMKRHEAD----------------------------- 220 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 P + ++ V+LPSFE+V DK +A +R ETNPG AR L Sbjct: 221 --------------PAKRAADRKTVVLPSFEEVLADKSAFAVMTRDFQMETNPGNARPLA 266 Query: 328 QKHGDRYVWINPPAIPLSTE--------EMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 Q+HG+R +++NPPA+PL MD ++ LP+ RVPHP Y N IPAYE ++ S Sbjct: 267 QRHGNRAIFMNPPALPLEDGVGSGADAVAMDEMYDLPFNRVPHPMYKNEGIPAYETVKHS 326 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V +MRGCFGGC+FCSITEHEGR+IQSRS +S++ E+ A+R + F G I+DLGGPTANM Sbjct: 327 VVLMRGCFGGCTFCSITEHEGRVIQSRSAESVLREVRALR-RMGDFRGTITDLGGPTANM 385 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y L+CKS E+ CR+LSCV+P +C ++ T+H P I+L R R +GIK + IASGVRYD Sbjct: 386 YKLKCKSEDIEKKCRKLSCVHPGVCENLQTDHGPLIDLMREVRQEEGIKHVFIASGVRYD 445 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 +A P Y+KELA HHVGG L +APEH L KM KPG+ S++RF+ +F S++AGK Sbjct: 446 LAERSPEYVKELAAHHVGGQLSVAPEHVSPRVLEKMKKPGIESFERFQTMFACASEEAGK 505 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQY IPYFIS HPG+ EDMV+LALWLKK+ R QVQ+F P+P+A +TTMYYTG +PL Sbjct: 506 EQYDIPYFISGHPGSTLEDMVDLALWLKKNGKRPRQVQDFIPTPMAVATTMYYTGIDPL- 564 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 K E V+ +G +++RL KALL Y +P +WP+ R+ALE G+K LIG LVP Sbjct: 565 ----KMEPVYTARGLREKRLQKALLLYWNPEHWPMAREALELAGRKDLIGRGPSALVPPE 620 >UniRef50_D2QYA0 Radical SAM domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYA0_9PLAN Length = 768 Score = 934 bits (2414), Expect = 0.0, Method: Composition-based stats. Identities = 340/730 (46%), Positives = 457/730 (62%), Gaps = 68/730 (9%) Query: 3 SISLIQPDRD-----LFSWPQYW-AACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYV 56 S+ L+QP L + + + GP LPM+REEM GWD DI+ VTGDAY+ Sbjct: 8 SLPLVQPSAGRLGDLLTTLRESSPSQPTGPVRPLPMTREEMQARGWDELDIVFVTGDAYI 67 Query: 57 DHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYT 116 DHPSF MAI GR+LEA GFRVGI++QPDW DD+ RLGKP LFF V+AGNMDSMIN YT Sbjct: 68 DHPSFAMAILGRVLEAAGFRVGIVSQPDWRKVDDWRRLGKPRLFFAVSAGNMDSMINHYT 127 Query: 117 ADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWS 176 A+R++R+DDAY+P G RPDRATL Y QR +EA+ VPVI GG+EASLRR AHYDYWS Sbjct: 128 ANRKVRNDDAYSPGGRIGLRPDRATLAYCQRSREAYPGVPVIAGGVEASLRRLAHYDYWS 187 Query: 177 DTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSG 236 D VRRS+L+D KAD+++FG GE ++++A LA G+ +RD+R A Sbjct: 188 DKVRRSILLDCKADLVVFGMGEEIILQIARALAEGKDTKSLRDLRGIAY----------- 236 Query: 237 VDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPS 296 A + QPP ++LPS Sbjct: 237 -------------------------------------ALGASEQPP------ADSLVLPS 253 Query: 297 FEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALP 356 FE V DK +A A+R +H+ETNP AR L+Q H + V NPP++P+S MD ++ LP Sbjct: 254 FEAVSTDKKAFAIATRTIHNETNPYNARRLVQWHDRQAVVCNPPSLPISQGSMDVIYGLP 313 Query: 357 YKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE 416 Y R PHP+Y IPA+ MI+ SV IMRGCFGGC+FCSIT H+GRIIQSRS+DS+I EI+ Sbjct: 314 YTRRPHPSYTEP-IPAFGMIKDSVTIMRGCFGGCTFCSITTHQGRIIQSRSKDSVIGEIK 372 Query: 417 AIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTIN 476 + + P F G +SD+GGPTANMY + C P E+ CRR SCV+P IC + T+HEP I Sbjct: 373 RMTED-PKFKGTVSDIGGPTANMYQMTCSKPEVEEKCRRQSCVHPTICKLLGTSHEPLIE 431 Query: 477 LYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMM 536 L + AR+L GIKK+L+ASG+R D+A P Y+K+L HHVGG+LK+APEHT+ L+KM Sbjct: 432 LMKEARELPGIKKVLVASGIRMDLARRSPEYMKDLVQHHVGGHLKVAPEHTDPDVLNKMR 491 Query: 537 KPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 KP +++F F SK+AGK+QY++PYFI++HPG+ + M+NLA++LK++ +R DQV Sbjct: 492 KPSNDDFEKFTASFMKESKKAGKKQYVVPYFIASHPGSDLDAMINLAVFLKQNGYRPDQV 551 Query: 597 QNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIR 656 Q+F P+P +T MYYTG +P + + V++ K K R+L +ALL++ P N+ +R Sbjct: 552 QDFIPAPFDVATAMYYTGMDP-----FTFKPVYIAKQLKDRKLQRALLQFFKPENYFEVR 606 Query: 657 QALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT-KHTPMATQRQTPATAK 715 +AL+ G+ LIG D L+PA +E RR N + HT + + + Sbjct: 607 EALQRAGRTDLIGEGCDALIPANPPKEALARRRSQANEHFSGQYVHTIPSGKPEAKDRPN 666 Query: 716 KASSTQSRPV 725 + SR Sbjct: 667 PGKTGDSRGA 676 >UniRef50_Q0STL9 UPF0313 protein CPR_1216 n=60 Tax=cellular organisms RepID=Y1216_CLOPS Length = 662 Score = 933 bits (2412), Expect = 0.0, Method: Composition-based stats. Identities = 291/719 (40%), Positives = 414/719 (57%), Gaps = 75/719 (10%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP+ +++M + GW+ CD +LVT DAY+DH SFG AI R+LE G++VGIIAQPDW S Sbjct: 5 KFLPICKDDMIERGWEQCDFVLVTADAYIDHHSFGTAIISRVLENAGYKVGIIAQPDWKS 64 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 DDF +LG+P L F V GNMD M+N YT ++LR D YTP GKRPDRAT+VY + Sbjct: 65 VDDFKKLGRPRLGFLVNGGNMDPMVNHYTVSKKLRKKDLYTPKGEMGKRPDRATIVYCNK 124 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 +EA+KDV +++GGIEASLRR AHYDYW + VR+S+LVDS AD+L++G E+ +VEVA Sbjct: 125 IREAYKDVNIVIGGIEASLRRFAHYDYWDNKVRKSILVDSGADLLVYGMSEKQIVEVADF 184 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L G IR + T I D + Y E Sbjct: 185 LNQGFDGKYIRHIPGTCYI---------------------ADSLDEIYEE---------- 213 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 +++LPSF+ V DK YA +I + E +P R L+ Sbjct: 214 -----------------------HIVLPSFKDVSSDKRTYAECFKIQYDEQDPVRGRTLV 250 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAY-GNARIPAYEMIRFSVNIMRGC 386 Q+H +YV IN P +PLS EE+D V+ALPY++ HP Y + I A E ++FS+ RGC Sbjct: 251 QEHNGKYVVINKPEMPLSREELDRVYALPYQKTYHPIYEKDGGIAAIEEVKFSLVSSRGC 310 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 G CSFC+IT H+GRI+ SRSEDSI+ E E I F G I D+GGPTAN CK Sbjct: 311 SGNCSFCAITFHQGRIVTSRSEDSIVEEAEEIT-KYDDFKGYIHDIGGPTANFRKPACKK 369 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAVED 504 C+ C+ P IC +M+ +H ++L RR R L GIKK+ I SG+RYD +A +D Sbjct: 370 QLTLGACKHKRCMSPGICKNMEVDHREYLHLLRRVRKLPGIKKVFIRSGLRYDYIMADKD 429 Query: 505 PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI 564 + KEL HHV G LK+APEH L M KP +YD F+ F +++ GK+Q++I Sbjct: 430 DTFFKELVEHHVSGQLKVAPEHVSPNVLKYMGKPAGKTYDEFRRKFFKITERLGKKQFII 489 Query: 565 PYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYK 624 PY +S+HPG + ED + LA +L+ ++ +QVQ+FYP+P STTM+YT +PL Sbjct: 490 PYLMSSHPGCKLEDAIMLAEYLRDINYQPEQVQDFYPTPGTLSTTMFYTELDPLT----- 544 Query: 625 SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV-------- 676 E+V++P+ +++ + +ALL++ +P N+ ++ AL G++ LIG+ CL+ Sbjct: 545 MEEVYIPRSKEEKAMQRALLQFKNPKNYNIVYDALVKAGREDLIGNGPKCLIRDKNSFGK 604 Query: 677 ---PAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKR 732 + R++R +N R + K +++Q + +S+ V+ G K+R Sbjct: 605 GNNHSNHKSGGRKSRNENSGRRESEDKKRSSHSKKQR-GNKSRGFDQKSQRVSKGKKRR 662 >UniRef50_A9KIV0 Radical SAM domain protein n=5 Tax=Clostridiales RepID=A9KIV0_CLOPH Length = 685 Score = 911 bits (2355), Expect = 0.0, Method: Composition-based stats. Identities = 262/713 (36%), Positives = 398/713 (55%), Gaps = 65/713 (9%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 +LP+SRE+M+ GW+ CD + V GDAYVDHPSFG AI R+LE+ G++VGIIAQPDW Sbjct: 4 DYLPISREDMNNRGWEQCDFVYVIGDAYVDHPSFGPAIISRVLESNGYKVGIIAQPDWKD 63 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 ++ LG P L F V GNMD+M+N Y+ ++ R DAY+P G RPDRAT+VY Sbjct: 64 ENSIQILGTPRLGFLVCGGNMDTMVNHYSVAKKRRATDAYSPGGQIGLRPDRATIVYCNL 123 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 ++ +KD P+I+GGIE+SLRR AHYDYWSD VRRS+L+DS+AD+L +G GE +V Sbjct: 124 IRKVYKDAPIIIGGIESSLRRLAHYDYWSDKVRRSILLDSQADVLSYGMGEHSIV----- 178 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 E+ D N+ I +K+ V TR Sbjct: 179 --------ELADALNSGIAIKDITFISGTVYKTR-------------------------- 204 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 V+LPS+E + DK ++A + + T+P A+ L+ Sbjct: 205 ----------------DLSSVYEPVMLPSYEDILRDKEVFARSFYTQYVNTDPFTAKCLV 248 Query: 328 QKH-GDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRG 385 + + YV N PA PLS EMD V+ALPY R HP+Y IPA E ++FS+ RG Sbjct: 249 EGYESGDYVVQNVPAKPLSQSEMDRVYALPYMRDYHPSYEEQGGIPAIEELKFSLTSNRG 308 Query: 386 CFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCK 445 CFGGC+FC++T H+GR+IQ+RS +SI++E + P F G I+D+GGPTAN C+ Sbjct: 309 CFGGCNFCALTFHQGRMIQTRSHESIVSEA-TLLTWDPEFKGYINDVGGPTANFRHTSCE 367 Query: 446 SPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV--E 503 + C C++P C ++ +H ++L ++ R+L +KK+ I SG+R+D + + Sbjct: 368 KQNTKGVCLNKQCLFPKPCSNLKVDHTDYLSLLKKLRELPKVKKVFIRSGIRFDYLIEDK 427 Query: 504 DPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYL 563 D ++KEL +HV G LK+APEH + LS M KP Y++F + ++ GK+Q++ Sbjct: 428 DDTFMKELCENHVSGQLKVAPEHISDAVLSMMGKPENSVYEKFITRYKKTNETLGKKQFV 487 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 +PY +S+HPG+ ++ V LA +L+ + +QVQ+FYP+P ST MYYTG +P Sbjct: 488 VPYLMSSHPGSTMKEAVALAEYLRDIGYMPEQVQDFYPTPSTVSTCMYYTGIDP-----R 542 Query: 624 KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEE 683 + V+VPK ++ + +AL++Y +P N+ L+ +AL + LIG + CL+ +++ Sbjct: 543 TMKPVYVPKSPHEKAMQRALIQYRNPKNYNLVVEALTLANRTDLIGYDKKCLIRPNYMDK 602 Query: 684 MREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAA 736 + R + + + ++ K K SS ++ G + + Sbjct: 603 DKFGSRPSESGKNSVRKGGARGASNSGDGREKNGSSKGNKGSRGGFGSKAGRS 655 >UniRef50_Q8THA2 UPF0313 protein MA_4618 n=6 Tax=Archaea RepID=Y4618_METAC Length = 742 Score = 904 bits (2337), Expect = 0.0, Method: Composition-based stats. Identities = 281/651 (43%), Positives = 397/651 (60%), Gaps = 37/651 (5%) Query: 27 APFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWS 86 + FLPMS EE+ GW DIILVTGDAYVDH SFG AI GR+LE GFRVGIIAQP W Sbjct: 124 SKFLPMSPEEVKARGWKELDIILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQPRWD 183 Query: 87 SKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQ 146 + +D +LG+P LFF V+AGN DSM++ T + R DAY+P N G RP+R+ ++Y+ Sbjct: 184 NPEDLKKLGRPRLFFSVSAGNTDSMVSNLTPGLKPRKKDAYSPGNKTGLRPNRSVIIYSN 243 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 R KEA+ +VP++LGGIEASLRR AHYDY SD VR+++L D+ AD++++G GE +VE+A Sbjct: 244 RIKEAFPNVPIVLGGIEASLRRFAHYDYLSDKVRQAILADAPADLVVYGMGELQIVEIAK 303 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 RL GE I +IRD+ T K + W Sbjct: 304 RLQAGEDIRKIRDIPGTVW--KMEVRAW----------------------------KELK 333 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 K P + K Y+ +PSF +V DK +A A R E NP + + Sbjct: 334 EKGKGTNEAVARDTAPEAAEFFKEYIEIPSFSEVSQDKAAFAKAFRTYFLEQNPITGKGI 393 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC 386 +Q H + N P PL+ E+D V+ LPY HP+Y IPA EM++FS+ RGC Sbjct: 394 VQPHPKTVIVQNRPMRPLTEAELDHVYELPYTGEAHPSYTEP-IPALEMVKFSLTTHRGC 452 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 FGGCSFC+IT+H+GR+I SRS +S++ E + + + P F G+I+ +GGPTANMY + C+S Sbjct: 453 FGGCSFCAITQHQGRMITSRSIESVLREAKKLTEK-PDFKGIINGVGGPTANMYGMGCRS 511 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 + C +C+YP +CP +DT+H+ + L +R R+L G+K + GVRYD+A+ED Sbjct: 512 WEKQGACLDKACLYPRVCPALDTSHKKLLELMKRLRELPGVKHVFTGYGVRYDLALEDEE 571 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 Y++EL THH+ G L+IAPEH + M KPG Y+RF E F ++K+ GKEQY++ Y Sbjct: 572 YLEELCTHHISGQLRIAPEHFSKRVTDAMSKPGKKVYERFSEKFAAFNKKCGKEQYIVNY 631 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 +S HPG +DM+ +A +L+ H +QVQ+F P+P+ ST MYYTG +P + + Sbjct: 632 LMSGHPGCTLKDMIEMAEYLRDHGGYTEQVQDFTPTPMTVSTCMYYTGLDP-----FTGK 686 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 V+V K K++ + +AL+ Y PAN+ L+ +ALE G+ L+G+ CL+ Sbjct: 687 KVYVAKDKKEKAMQRALMHYRSPANYELVYEALEKAGRLDLVGNAHKCLIR 737 >UniRef50_D1P9M1 Radical SAM domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9M1_9BACT Length = 730 Score = 897 bits (2317), Expect = 0.0, Method: Composition-based stats. Identities = 277/716 (38%), Positives = 398/716 (55%), Gaps = 72/716 (10%) Query: 24 FGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQP 83 + FLP +++E + GWD D+IL +GDAYVDHPSFG AI GR+LEA G+RV I+ QP Sbjct: 3 YKLTDFLPTTKKECELRGWDELDVILFSGDAYVDHPSFGPAILGRILEANGYRVAIVPQP 62 Query: 84 DWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATL 142 DW DF +LG+P LFFGV+ G MDSM+NRYTA+RR+R +DA++PD+ RPD ++ Sbjct: 63 DWHGDFRDFKKLGRPRLFFGVSPGAMDSMVNRYTANRRMRSEDAFSPDSRHDMRPDYPSI 122 Query: 143 VYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLV 202 VYTQ K+ + DVPV LGGIEASLRR +HYDYW D +R+ +L DS AD++++G GER +V Sbjct: 123 VYTQILKKLFPDVPVALGGIEASLRRISHYDYWKDELRKCILCDSGADLILYGMGERSIV 182 Query: 203 EVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCA 262 E+A+ A G+ +S+I ++ KE+ Sbjct: 183 ELANAFAEGKTLSQIHEMPQVVFYCKES-------------------------------- 210 Query: 263 DNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 P ++ ++L S E+ +K A R L E N Sbjct: 211 -------------------EIPGGFKDDDIILHSHEECLHNKKGQAENVRHLEEEANKMH 251 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 A+ ++Q+ +YV +NPP ++T E+D+ F LPY R+PHP Y IPAYEMI+FSVN+ Sbjct: 252 AQRMIQEVDGKYVVVNPPFPLMTTAELDAAFDLPYTRLPHPKYKGKTIPAYEMIKFSVNL 311 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 RGCFGGCSFC+I+ H+G+ + RS++SI+ E++ I +P F G +SDLGGP+ANMY + Sbjct: 312 HRGCFGGCSFCTISAHQGKFVVCRSKESILKEVKKII-QMPDFKGYLSDLGGPSANMYGM 370 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 K+ +A + C+R SCV P ICP+++T+H + +Y L GIKK I SGVRYD+ + Sbjct: 371 HGKNQKACEVCKRPSCVNPQICPNLNTDHSKLLEIYHAVDALPGIKKSFIGSGVRYDLLL 430 Query: 503 EDP----------RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDT 552 Y +EL T HV G LK+APEHT L M KP + FK +FD Sbjct: 431 HKSKDEKVNQAAREYTRELITKHVSGRLKVAPEHTSPEVLKFMRKPSFDLFYEFKRIFDK 490 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 +K+ G Q +IPYFIS+HPG +EDM LA+ K F L+QVQ+F P+P+ ST +Y Sbjct: 491 INKEEGLNQQIIPYFISSHPGCHEEDMAELAVITKGLDFHLEQVQDFTPTPMTISTETWY 550 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 TG +P Y E V K K++ + ++ P I L +G+ LI Sbjct: 551 TGYDP-----YTLEPVSSAKTQKEKLAQRMFFFWYKPEERRAIESELRRIGRADLI---- 601 Query: 673 DCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAG 728 D L ++ + ++ + + + + + + + R G Sbjct: 602 DKLYDRKSMGGSFKGKKTHYDDKAIGSTYDNPGVGKGAKGKRGTGRNASDRYAPKG 657 >UniRef50_C9MQP2 Radical SAM domain protein n=4 Tax=Prevotella RepID=C9MQP2_9BACT Length = 710 Score = 892 bits (2306), Expect = 0.0, Method: Composition-based stats. Identities = 269/729 (36%), Positives = 404/729 (55%), Gaps = 74/729 (10%) Query: 22 ACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIA 81 + F FLP +++E++ GWD DIIL +GDAY+DHP+FG+A+ GR LEA G++V I+ Sbjct: 40 SRFQLTDFLPTTKKEVELRGWDQLDIILFSGDAYIDHPAFGVAVIGRTLEAAGYKVAIVP 99 Query: 82 QPDWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRA 140 QPDW DF +LG+P L+FG+ G MDSM+N+YTA+RRLR +DAY+PD RP+ Sbjct: 100 QPDWHGDLRDFKKLGRPRLYFGIAPGAMDSMVNKYTANRRLRSEDAYSPDGRHDLRPEYP 159 Query: 141 TLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERP 200 ++VY K+ + DVPV+LGGIEASLRR HYDYW D +R+ +L D+ ADM+++G GE+ Sbjct: 160 SIVYANILKQLYPDVPVVLGGIEASLRRLTHYDYWKDCLRKCILCDAHADMIIYGMGEKQ 219 Query: 201 LVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLP 260 +VE+A L G I ++++V T + KE Sbjct: 220 VVEIAKELETGIKIKDLKNVPQTVYLCKEE------------------------------ 249 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP 320 P + ++L S E +K A + + E+N Sbjct: 250 ---------------------EIPGGINEDDIVLHSHEACLHNKKFQAENFKYIEEESNK 288 Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSV 380 A+ ++Q + Y +NPP ++T E+D+ + LPY R PHP Y IPAYEMI+ SV Sbjct: 289 KHAQRILQAVDNLYAVVNPPYPTMTTAEIDAAYDLPYTREPHPKYRGKTIPAYEMIKHSV 348 Query: 381 NIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMY 440 NI RGCFGGC+FC+I+ H+G+ + RS++SI+ E++ + + +P F G +SDLGGP+ANMY Sbjct: 349 NIHRGCFGGCAFCTISAHQGKFVSCRSKESILKEVKQVIE-MPDFKGYLSDLGGPSANMY 407 Query: 441 MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDI 500 + K+ +A + C+R SCV P+ICP+++T+H +++Y +L GIKK I SGVRYD+ Sbjct: 408 GMAGKNQKACEHCKRPSCVNPEICPNLNTDHSRLLDIYHSVDELSGIKKSFIGSGVRYDL 467 Query: 501 AVEDPR----------YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELF 550 + + Y EL T HV G LK+APEHT + L M KP + FK +F Sbjct: 468 LLHKSKDEKSNEAARQYTHELITRHVSGRLKVAPEHTSDRVLKLMRKPSFQQFYIFKRIF 527 Query: 551 DTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 D +++ G Q +IPYFIS+HPG ++EDM LA+ K F L+Q+Q+F P+P+ ST Sbjct: 528 DRINREEGLRQQIIPYFISSHPGCQEEDMAELAVLTKDLDFHLEQIQDFTPTPMTVSTEA 587 Query: 611 YYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 +YTG +P Y E +F K K++ + ++ P I + L+ +G+ LIG Sbjct: 588 WYTGYDP-----YTLEPIFSAKTPKEKLAQRQFFFWYKPEARRDIERELQRIGRSDLIGK 642 Query: 671 RRDCLVPAPTIEEMREARRQNRN-----TRPALTKHTPMATQRQTPATAKKASSTQSRPV 725 D VP + + + + R A P + T + K + + Sbjct: 643 LYDN-VPKRHPRAVYDPKAVGSSPDIPRRRSAGKVDKPNTRHKSTTSNGGKKPKSYNPNF 701 Query: 726 NAGAKKRPK 734 G + + + Sbjct: 702 MGGRRHKQR 710 >UniRef50_A1ALG7 UPF0313 protein Ppro_0556 n=9 Tax=Desulfuromonadales RepID=Y556_PELPD Length = 623 Score = 872 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 283/688 (41%), Positives = 396/688 (57%), Gaps = 67/688 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 F+P +R EM + GW+ D+I V GDAYVDHP+FG+ + R LE GFRVG+IAQPDW S Sbjct: 3 FIPTTRSEMHRRGWEQLDVIFVNGDAYVDHPAFGVPLLARWLEKHGFRVGVIAQPDWRSV 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + FM LG+P LFF +AG MDSM+ YT R+LRHDDAYTP N G RP+RATL+YT R Sbjct: 63 EPFMALGRPRLFFAASAGAMDSMVAHYTPARKLRHDDAYTPGNRHGARPNRATLIYTSRL 122 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 KEA++DVPV++GGIEASLRR AHYDYW + VRRS+L D+KAD+L++G ER ++E+A R+ Sbjct: 123 KEAFRDVPVVIGGIEASLRRFAHYDYWENRVRRSLLFDAKADLLLYGMAERSMLELAQRM 182 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GE +++IR L G V+ Sbjct: 183 GRGESLADIR-----------GLRGTCWVEK----------------------------- 202 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 ++ +P FE+ D++ +A A R+ E NP R ++Q Sbjct: 203 ---------------AGHHLTDHLEIPCFEECGSDRLKFAEAFRLASREQNPYNGRTIVQ 247 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 +HGDR + PP++PL EMDS++ALP+++ PHP+YG IPA+E IR S+ RGCFG Sbjct: 248 RHGDRLLVCAPPSLPLEEAEMDSLYALPFEKAPHPSYGET-IPAWEQIRCSITSHRGCFG 306 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFC+I H+G++IQSR + S+ +EI + P F G ISD+GGPTANMY L C Sbjct: 307 GCSFCAIAMHQGKLIQSRGQSSVESEIRELVRK-PWFRGSISDIGGPTANMYGLSCGDSA 365 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 A + CRR SC++P C H+ + + L ARD G++ + ++SGVRYD+ P Y Sbjct: 366 AMKCCRRESCLFPKQCRHLIVDDRRAVRLLHAARDFAGVRHVAVSSGVRYDLLERQPAYC 425 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 +EL HHVGG LK+APEH E M KPG+ ++RF F S++ GK Q ++PY I Sbjct: 426 RELIAHHVGGLLKVAPEHLVERVTMLMRKPGLAVFERFLSRFREESRRLGKPQGIVPYLI 485 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 S HPG DM+ LAL L++ R++QVQ+F P+P +T MYY+G +P E + Sbjct: 486 SGHPGCSLADMLELALALQRLGLRVEQVQDFTPTPGTCATCMYYSGIDP-----ETGEKL 540 Query: 629 FVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREAR 688 +V D+++ L KALL H P + +AL +G++ L ++ E A+ Sbjct: 541 YVATSDREKGLQKALLLGHLPGERKKVLEALALLGREEL-----ATVLLTAGRSEAVSAK 595 Query: 689 RQNRNTRPALTKHTPMATQRQTPATAKK 716 R + + + R + Sbjct: 596 RPHSVGQGVIHPGRERKAGRGKGTKKAR 623 >UniRef50_A7IB47 Radical SAM N-terminal domain protein n=7 Tax=cellular organisms RepID=A7IB47_METB6 Length = 640 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 268/693 (38%), Positives = 389/693 (56%), Gaps = 69/693 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP + E G + DIILVTGDAYVDHPSFG A+ GR+L GF VGIIAQPD +++ Sbjct: 7 FLPRTPAEGRACGIEEFDIILVTGDAYVDHPSFGTALVGRVLWDAGFSVGIIAQPDATTE 66 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DF LG+P LFFG+++GN+DSM+N +T + + R D Y+ + +RPDRA +VY R Sbjct: 67 KDFTVLGRPRLFFGISSGNVDSMVNNFTPNLKRRSSDVYSHGGIP-RRPDRAAIVYANRV 125 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 A+ D P++LGGIEASLRR AHYDYW D VR+S+L D+ AD+L +G E+ +V +A RL Sbjct: 126 HAAFPDTPIVLGGIEASLRRFAHYDYWQDRVRQSILADAPADLLAYGMAEQQMVAIARRL 185 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GEP IRD+ T ++ A HP G Sbjct: 186 DTGEPARAIRDIPGTCYTMEVA-----------------EWRATHPEG------------ 216 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 V +P F ++ DK YA A + + E +P R + Q Sbjct: 217 ----------------------VVEIPGFSEISSDKTAYARAFALHYREQDPVRGRPVAQ 254 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 H + NPPA PLS +++D ++ LP+ R HP Y +PA E ++FSV RGCFG Sbjct: 255 PHPKTVIVQNPPARPLSGDKLDHIYELPFSRRAHPLYKKP-VPALEPVQFSVVSHRGCFG 313 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 CSFC++T H+GRI+QSRS SI+ E+ + +P F G++ D+GGPTANMY + C+ Sbjct: 314 SCSFCALTHHQGRIVQSRSAASIVREVTRMAA-MPEFKGIVQDVGGPTANMYGMACERWD 372 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDP--- 505 C SC C + TNH P + + R+ ++ G+KK+ + SG+RYD+ + D Sbjct: 373 GAGACPEKSC--SPACQTLRTNHRPLVEILRKISEVPGVKKVFVGSGIRYDLVLADDLNS 430 Query: 506 RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIP 565 RY++ L HV G+LK+APEH M KP ++RF++ F + K QYL+P Sbjct: 431 RYLETLCERHVSGHLKVAPEHISPRVTKAMNKPDGSVFERFRDRFTALQQGKAKRQYLVP 490 Query: 566 YFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS 625 YF+S HPG DMV LA +++ +QVQ+F P+P++ ST MYYTG +P + Sbjct: 491 YFMSGHPGCTISDMVALAEYIRDRGLYTEQVQDFTPTPMSVSTCMYYTGLDP-----FTL 545 Query: 626 EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP-TIEEM 684 E V VPKG +++++ +ALL+Y +P N L+ + L G++ LIG+ + CLV + Sbjct: 546 EPVHVPKG-REKKIQRALLQYREPQNRGLVFEGLRMAGREDLIGTGKQCLVSGDVYLRRS 604 Query: 685 REA---RRQNRNTRPALTKHTPMATQRQTPATA 714 R R+++ TRP + + +++ P + Sbjct: 605 RPGPVPRQKSSGTRPGGAAGSGTSRKKERPGSQ 637 >UniRef50_C9KPY8 Radical SAM domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY8_9FIRM Length = 607 Score = 867 bits (2239), Expect = 0.0, Method: Composition-based stats. Identities = 274/671 (40%), Positives = 382/671 (56%), Gaps = 75/671 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP+ R +M++ GW D + ++GDAYVDHPSFG AI R+LE G++VGII QPDW S Sbjct: 4 FLPICRRDMEERGWHELDFVFISGDAYVDHPSFGPAIICRLLEKHGYKVGIIPQPDWHST 63 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DF RLGKP L F V+AGNMDS++N++TA +++RH+DAY+P AG RP+RAT+VY R Sbjct: 64 KDFDRLGKPRLGFLVSAGNMDSLLNKFTAAKKVRHEDAYSPGGQAGHRPERATIVYCNRL 123 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 +E + DVP+I+GGIEASLRR AHYDYWS+ +RRS+LVDS+AD+L++G GER ++E+A L Sbjct: 124 RELYPDVPIIIGGIEASLRRMAHYDYWSNAIRRSILVDSQADLLIYGMGERAILEIAADL 183 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 G ++ I+DV T V W ++ + K Sbjct: 184 QQGVEVANIQDVHGTCYRVPNKDYAWDYIELPSFEAVRK--------------------- 222 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 KK A+A K+ Y +P R L+Q Sbjct: 223 DKKTFAEAF--------------------------KIEYLE--------QDPIRGRKLLQ 248 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGCF 387 ++ + V NPPA+PLS E+MD V+ LPY R HP Y +PA + ++FS+ RGCF Sbjct: 249 QNDEWCVVQNPPAMPLSEEQMDEVYGLPYMRTYHPIYEKAGGVPAIKEVQFSLVSQRGCF 308 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGC+FC+I HEGRIIQ RS S+I E + I + GF G I D+GGPTAN C Sbjct: 309 GGCNFCAIISHEGRIIQRRSHASLIREAK-ILTHMKGFKGYIHDVGGPTANFRRTSCDGQ 367 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD-IAVEDPR 506 TCR C+ P+ C + +H I L R R L G+KK+ + SG+R+D + + Sbjct: 368 LKRGTCRGKPCLSPEPCKLLVADHSDYIKLLRELRSLPGVKKVFVRSGIRFDYLLLAKDD 427 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 ++ EL +HV G LKIAPEH + M K Y RF E F +++ GK+QYL+PY Sbjct: 428 FLYELCKYHVSGQLKIAPEHISDRVTRLMGKSNCAVYLRFVEKFRRMNERLGKKQYLVPY 487 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 F+S+HPG+ D V LA +++ + QVQ+F P+P ST M+YTG +P+ E Sbjct: 488 FMSSHPGSELSDAVELAEFIRDMGYHPQQVQDFIPTPGTLSTCMWYTGIDPMT-----GE 542 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 V+ K +++R+ +AL++Y P N ++R+AL ++ LIG CLV Sbjct: 543 KVYSAKSYEEKRMQRALMQYWLPKNHEIVRKALHLAHREDLIGFGPKCLV---------- 592 Query: 687 ARRQNRNTRPA 697 R R TRPA Sbjct: 593 --RPRRETRPA 601 >UniRef50_A7H6E2 Radical SAM domain protein n=4 Tax=Anaeromyxobacter RepID=A7H6E2_ANADF Length = 658 Score = 854 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 301/685 (43%), Positives = 412/685 (60%), Gaps = 74/685 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP S E+ GW + D++LVTGDAYVDHPSFG A+ GR+LEAQG++VGI+AQPDW S Sbjct: 35 FLPTSAAELRARGWSALDVLLVTGDAYVDHPSFGAAVIGRVLEAQGYKVGIVAQPDWRST 94 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 D +R+G+P LF GVT+G MDSM+N YTA +R R DDAYTPD VAGKRPDRAT Y + C Sbjct: 95 ADVLRMGRPRLFVGVTSGAMDSMVNHYTAHKRRRSDDAYTPDAVAGKRPDRATTAYARLC 154 Query: 149 KEAW-KDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 ++A+ P+++GGIEASLRR AHYDYW D V SVLV S AD+L++G GE+P++E+A R Sbjct: 155 RQAFGATTPIVVGGIEASLRRIAHYDYWDDRVLPSVLVPSGADLLVYGQGEKPVLEIARR 214 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 LA GE + + DV TA+ V + Sbjct: 215 LASGEDLCGLVDVPGTALAVPD-------------------------------------- 236 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 + + E+ + LP++E++ D+ +A SR+ H E N AR L+ Sbjct: 237 -----------LALAMLEGRERKTLELPAYEEIALDRRRFAEFSRLYHLEHNAENARILV 285 Query: 328 QKHG----DRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIM 383 Q+HG R+V +N P STEE+D + LPY R HP+YG A IPA E IR+S+ I+ Sbjct: 286 QRHGRGERARFVVVNEPMAAPSTEELDRIAELPYVREAHPSYGGAHIPALEQIRWSIQIL 345 Query: 384 RGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLR 443 RGC GC+FC ITEH+GR I SRSE S++ E+ + F G I+D+GG TANM+ +R Sbjct: 346 RGCAAGCAFCCITEHQGRDIASRSEASVLRELATLASK-ESFKGTITDVGGATANMWGMR 404 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 C A CRR SCVYP +C +H P ++LY +AR +KG+K + + SGVRYD+A Sbjct: 405 CTDAEAHAVCRRASCVYPTVCKFFAVDHGPLVDLYEKARKVKGVKHLFVGSGVRYDLAQA 464 Query: 504 D----PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 D RY+K L HHV G LK+APEH E L M KPG+ S++R ++ F+ YS++AGK Sbjct: 465 DTKNGARYLKTLVQHHVSGQLKVAPEHVCEPVLKLMKKPGVSSFERLRKDFERYSREAGK 524 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQYL+PYFIS+HPG+ E L +L+ +R++ QVQ+F P+P+ ++ MY++G +P+ Sbjct: 525 EQYLVPYFISSHPGSSLEQAAELMDYLQDNRWKPQQVQDFMPTPMTLASDMYWSGYHPMT 584 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 E V V + ++R+ KALLR+ DPAN PLI +AL +G+ L P Sbjct: 585 -----GEPVHVTRDMDEKRMQKALLRWGDPANRPLIEKALRKLGR----------LKPGE 629 Query: 680 TIEEMREARRQNRNTRPALTKHTPM 704 + R + R P Sbjct: 630 RLGPGMRPSRGSPKRRGPAGGPGPR 654 >UniRef50_C7N5G2 Fe-S oxidoreductase n=54 Tax=cellular organisms RepID=C7N5G2_SLAHD Length = 718 Score = 852 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 256/656 (39%), Positives = 380/656 (57%), Gaps = 65/656 (9%) Query: 27 APFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWS 86 + FLPM+ E GWD D + V GDAYVDHPSFGMAI R+LE G++VGIIAQPDW Sbjct: 120 SEFLPMTMEAARARGWDQVDFVYVCGDAYVDHPSFGMAIITRVLEHAGYKVGIIAQPDWR 179 Query: 87 SKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQ 146 G+P L F V++GNMDSM+N YT ++ RH+DA+TP G RP+ A +VY+ Sbjct: 180 DPASVSVFGEPRLGFMVSSGNMDSMVNHYTVAKKKRHNDAFTPGGEFGHRPNHAVVVYSN 239 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 ++ +K P+ILGG+EASLRR AHYDYWSD ++RS+L+DS AD++ +G GER +VE+A Sbjct: 240 LIRQTYKTTPIILGGVEASLRRLAHYDYWSDKMKRSILMDSGADIISYGMGERSIVEIAD 299 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 LA G +RD+ + +D T T D + Y Sbjct: 300 ALASGL---SVRDI--------------TFIDGTVFRT----DSLDEVY----------- 327 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 Y LLPS++ ++ DK+ YA + ++ + +P R L Sbjct: 328 -----------------------DYELLPSWDDLQADKLNYARSFKVQYENADPIRGRRL 364 Query: 327 MQKHGD-RYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMR 384 ++ + + ++ NPP +PL+T EMD V+ALPY R HP+Y + +PA ++FS+ R Sbjct: 365 VEPYPNHQFAVQNPPTLPLTTAEMDEVYALPYARAWHPSYDDAGGVPALAEVKFSLASNR 424 Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GCFG CSFC++T H+GRI+ +RS +SI+ E + P F G I D+GGPTA+ C Sbjct: 425 GCFGECSFCALTFHQGRIVSARSHESILAEARDMIAD-PDFKGYIHDVGGPTADFRAPAC 483 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAV 502 C+ C+ P ICP M +H ++L R+ R L G+KK+ + SG+R+D +A Sbjct: 484 DKQLKAGACKHRRCMTPHICPRMKVDHSDLVSLLRKLRALPGVKKVFLRSGIRFDYVVAD 543 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 DP +++EL HH+ G L++APEH + L+ M KP Y F L++ + + GK+Q+ Sbjct: 544 SDPTFMRELCRHHISGQLRVAPEHVSDAVLAAMGKPENSVYQEFISLYERENAKTGKKQF 603 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 ++PY +S+HPG+ ++ V LA + + + +QVQ+FYP+P ST MYYTG +P Sbjct: 604 VVPYLMSSHPGSTLKEAVELAEYCRDLGYMPEQVQDFYPTPSTISTCMYYTGVDP----- 658 Query: 623 YKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA 678 E ++ PK + + +AL++Y DP N+ L+ +AL G+ LIG ++CLV Sbjct: 659 RTMEPIYTPKSAHDKAMQRALIQYRDPKNYDLVVEALRRAGRTDLIGFGKNCLVRP 714 >UniRef50_P61404 UPF0313 protein GSU2873 n=8 Tax=Proteobacteria RepID=Y2873_GEOSL Length = 605 Score = 848 bits (2191), Expect = 0.0, Method: Composition-based stats. Identities = 299/639 (46%), Positives = 393/639 (61%), Gaps = 61/639 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP++R E + GWD DI+ VTGDAYVDHP+FG+ + R LE GFRVGII QPDW S Sbjct: 3 FLPVTRGEALKRGWDELDIVFVTGDAYVDHPAFGVPLLARWLEFHGFRVGIIPQPDWRSC 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + FM LG+P LFF V++G MDSM+ YT R+LRHDDAYTP N G RP+RAT+VYT R Sbjct: 63 EPFMALGRPRLFFAVSSGAMDSMVAHYTPARKLRHDDAYTPGNRHGARPNRATIVYTSRL 122 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 KEA++DVPV++GGIEASLRR AHYDYW D VRRS+L+D+KAD+L+ G GERP++E+A R+ Sbjct: 123 KEAYRDVPVVIGGIEASLRRFAHYDYWEDKVRRSLLLDAKADLLVHGMGERPILELARRV 182 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 + G + V P + Sbjct: 183 RT-----------GEPFQAIADIRGTAVVLGRGAAPPAGV-------------------- 211 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 V LP FE+V D+ YA A R+L E NP CA L+Q Sbjct: 212 -----------------------VELPPFEEVAADRHRYAEAFRLLSREQNPHCAHPLVQ 248 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 +HGDR + NPPA PL E+DSV+ALP++R PHP++G IPAYE IR SV RGCFG Sbjct: 249 RHGDRTLLCNPPAYPLEEAELDSVYALPFQRAPHPSHGEP-IPAYEQIRASVTTHRGCFG 307 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFC+IT H+G++IQSRSE S++ E+E + + F G +SD+GGPTANMY + C + R Sbjct: 308 GCSFCAITHHQGKVIQSRSERSVLAEVERMAA-MAWFRGSVSDVGGPTANMYGVHCGNTR 366 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 CRR SC+YP C ++ E L R R ++G++ + ++SG+RYD+ P Y Sbjct: 367 GGHACRRESCLYPSPCRYLAVGGERGAALLRAVRGVRGVRNVAVSSGIRYDLMERQPAYF 426 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 +EL HHVGG LK+APEH M KPG S+DRF E F S + GK+QY+IPY + Sbjct: 427 RELVAHHVGGLLKVAPEHMVARVTDLMRKPGKESFDRFLERFRRESARLGKKQYIIPYLM 486 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 S HPG +DMV LAL+LK+ R++QVQ+F P+P ST MY+TG +P + V Sbjct: 487 SGHPGCTLDDMVELALFLKRAGLRVEQVQDFTPTPGTLSTCMYHTGLDP-----FAGAPV 541 Query: 629 FVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHL 667 VP+GD+++RL KALL +H P + AL A G++ + Sbjct: 542 HVPRGDREKRLQKALLLWHLPTERRNVLDALRACGRESV 580 >UniRef50_C9RQ46 Radical SAM domain protein n=28 Tax=Bacteria RepID=C9RQ46_FIBSS Length = 739 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 276/719 (38%), Positives = 389/719 (54%), Gaps = 78/719 (10%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP+ +E++D+LGWD D+I+++ DAYVDHP FG A+ GR+LE +G RV I+ QP+W Sbjct: 5 RFLPICKEDLDELGWDYVDVIIISADAYVDHPCFGHAVVGRLLEHEGLRVAILPQPNWRD 64 Query: 88 K-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQ 146 DF +LG P LFF +++G MDSM+N YTA +RLR DDA+TP N AG RPD AT Y + Sbjct: 65 DLRDFKKLGTPRLFFAISSG-MDSMVNHYTAAKRLRSDDAFTPGNKAGFRPDYATYTYAK 123 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 K+ + DVP+++GG+E+SLRR HYDYWS+ ++ S+L D++AD+L++G GE+PL E+ Sbjct: 124 ILKKLYPDVPLLIGGLESSLRRVTHYDYWSNKLKPSILFDTQADILVYGMGEKPLKEIVR 183 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 L G P S + V TA + Sbjct: 184 LLKKGVPFSSLNSVPQTAYL---------------------------------------- 203 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 A P+ WE + L S+E+ K R + E N + Sbjct: 204 ---------APKGSVPKNSKWED--LRLYSYEECLESKRNQIENCRRVDIECNKWFQHRI 252 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRG 385 +Q ++ V INP P+ E+D F PY R PHP Y IPA++MI+FS+N RG Sbjct: 253 LQDVAEQTVVINPAYPPMEYGELDESFEYPYAREPHPRYKKRGNIPAFDMIKFSINTHRG 312 Query: 386 CFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCK 445 CFGGCSFC+I H+G+ I SRS +SI+ E+E I + GF G I+DLGGP+ANMY +R + Sbjct: 313 CFGGCSFCAINAHQGKFIASRSRESILREVE-IVTNMEGFAGTITDLGGPSANMYNMRGR 371 Query: 446 SPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED- 504 P Q C R SC+ P IC +MDT+H ++LYR R+ +K + I SGVRYD+ +++ Sbjct: 372 DPSRCQKCARASCLTPKICDNMDTHHAEILSLYREVRNHPKVKHLFIGSGVRYDMLLQET 431 Query: 505 ---------PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 Y +EL +HV G LK+APEHT + L M KP + +FKE FD K Sbjct: 432 DDEELRKDHEEYARELIDYHVSGRLKVAPEHTSDAVLKLMRKPSFTLFHKFKEFFDDECK 491 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + GK+Q LIPYFIS+HPG + DM LAL K+ F+L+QVQ+F P+P+ +T M+Y Sbjct: 492 RIGKKQQLIPYFISSHPGCTEADMAELALETKQLGFQLEQVQDFTPTPMTIATEMFYAEM 551 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA--MGKKHLIGSRRD 673 P + +FV K +++ K ++ PAN P +R+ LE MGK R Sbjct: 552 TP------DGKPLFVAKTPEEKANQKQFFFWYIPANRPHLREVLERLKMGKV-----SRL 600 Query: 674 CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKR 732 L E + R +T A K ++R + G + R Sbjct: 601 LLSRTAMAEGKEYFPSKEREENEDFRNREMQKRDERTNALRPKKEKVKNRWRDDGYEPR 659 >UniRef50_B5YAS7 Radical SAM n=2 Tax=Dictyoglomus RepID=B5YAS7_DICT6 Length = 589 Score = 828 bits (2138), Expect = 0.0, Method: Composition-based stats. Identities = 252/636 (39%), Positives = 374/636 (58%), Gaps = 61/636 (9%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP++ E + GWD DII+VTGDAYVDHPSFG ++ GR LE GFRVGII QPDW Sbjct: 5 KFLPINLYEAKKRGWDELDIIIVTGDAYVDHPSFGASVIGRYLEYFGFRVGIIPQPDWKD 64 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 K+ F LGKP LFFG+TAG++DSM+ YT ++ R +DAYTP + GKRPDRAT+VY Sbjct: 65 KESFKVLGKPRLFFGITAGSVDSMVANYTPNKFKRREDAYTPGGLPGKRPDRATIVYANF 124 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 E + DVP++LGGIEASLRR +HYD+W + VR SVL+D++A ++++G GE+ +++A Sbjct: 125 VHEIFPDVPIVLGGIEASLRRFSHYDFWDNKVRHSVLLDARAKIIVYGMGEKQTLQIAKM 184 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L+ G+ EI + + E D Sbjct: 185 LSEGKSWYEIYQIPGIVFSLGEKEFDTFIKD----------------------------- 215 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 K Y+LLPSFE+V DK Y R+L + L+ Sbjct: 216 ---------------------KDYILLPSFEEVSQDKDRYYDFQRLLLEGMKRK--KILV 252 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 Q+ G R++ NPP +++++D +++LP+ R+PHP+Y +IPA+E ++ S+ RGCF Sbjct: 253 QRDGKRFIIQNPP-PSYTSQDLDFIYSLPFMRLPHPSYKE-KIPAFETVKTSIVSHRGCF 310 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 G C+FCS+ H+G + SRSE SI+ EI + F G ISD+GGPTANMY LRCK Sbjct: 311 GSCTFCSLNLHQGWQVISRSEKSILEEIYRLTKHRE-FRGTISDVGGPTANMYRLRCKIH 369 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 +C C++PD+C +++ +H +NL ++ ++++ +K + IASG+RYDIA++D Y Sbjct: 370 NIPGSCPERDCLFPDVCKYLEVDHSAQLNLLKKIKEIEKVKHVFIASGIRYDIALKDEYY 429 Query: 508 IKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 I E+ ++GG+L APEH ++ L M KP Y+ F ++F+ K+ KE Y+IPY Sbjct: 430 IGEIIKEGYIGGHLSAAPEHVKDHVLEIMKKPKFKVYEEFVDIFERNLKKYRKELYIIPY 489 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 FISAHPG +D +LA+++K L+Q+Q++ P PL ++ +YT + L K E Sbjct: 490 FISAHPGATIKDAWDLAMYIKGLGHYLEQIQDYTPLPLTPASCAFYTEYHTLRK-----E 544 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 ++V K + RRL +AL +Y D N + + + + Sbjct: 545 KIYVAKTYEDRRLQRALAQYKDKKNREFLVKNKKKI 580 >UniRef50_Q58555 UPF0313 protein MJ1155 n=4 Tax=Methanocaldococcus RepID=Y1155_METJA Length = 603 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 260/645 (40%), Positives = 377/645 (58%), Gaps = 73/645 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP ++EEMD+ GW+ DII+VTGDAY+DH FG ++ GR L G+RVGIIAQPDW + Sbjct: 2 FLPTTKEEMDEWGWEELDIIIVTGDAYIDHYLFGASVVGRYLVEHGYRVGIIAQPDWKNL 61 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD RLGKPN FF VTAGN+DSM+ YT +RLR D+ + + + KRPDRAT+VYT Sbjct: 62 DDIKRLGKPNYFFAVTAGNLDSMLAHYTPQKRLRDFDSMSNEGIR-KRPDRATIVYTNLI 120 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 K A+K VP+ LGGIEASLRR +HYDYW + VR+SVL+DSKAD+LM+G GE+ ++ + L Sbjct: 121 KRAFKGVPIALGGIEASLRRFSHYDYWDNKVRKSVLIDSKADILMYGMGEKSILAITKAL 180 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 GE I ++ ++ T + V E KI I Y Sbjct: 181 ESGENIKDL-EINGTVVRVNE----------------RKIGDIKERYE------------ 211 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 LPS E+V K YA R L + + Q Sbjct: 212 ----------------------TKELPSHEEVVNSKEKYAEMHRKLM-----TMDKVIYQ 244 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 K G++Y+ PP I L+ +EMD ++ +P++R HP+Y + +P ++FSV RGCFG Sbjct: 245 KVGNQYLVQFPP-IYLTEKEMDEIYEMPFERRAHPSY--SYVPGIVPVQFSVVTHRGCFG 301 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GCSFCSI H+G++IQ+RSE SI+ EI + + F GVI D+G PTANMY + CK Sbjct: 302 GCSFCSILHHQGKVIQNRSERSILKEIRKLLNH-EDFKGVIQDIGAPTANMYRMGCKKGL 360 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK-KILIASGVRYDIAVEDPRY 507 A++ + +C+YP+ C ++ NH+P I LYR+ RD+ G ++ + SGVRYD+ + D Y Sbjct: 361 ADRCPK--NCLYPEPCENLIINHKPLIKLYRKIRDIVGDDVRVYVRSGVRYDLIMYDEEY 418 Query: 508 ----IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYL 563 IKEL+ +HV G LK+APEH + + KP + +F E + +++ G + + Sbjct: 419 GEDYIKELSKYHVSGRLKVAPEHISKKVCKAIQKPDGRLFKKFLEKYREIAEKVGGIKEV 478 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 +PY++ AHP ++M+ LA ++ K+ QVQ F P+P+ STTMY+TG NP+ Sbjct: 479 LPYWLIAHPNCSIKEMIELAEFIHKNNCYSRQVQVFTPTPMTLSTTMYHTGINPIT---- 534 Query: 624 KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 +E V+VP +++++ KA+ Y + NW + + +G K +I Sbjct: 535 -NEKVYVPYTYREKKIQKAICLYREEENWEKALEGFKMVGYKGVI 578 >UniRef50_Q7MVU9 UPF0313 protein PG_0934 n=25 Tax=Bacteria RepID=Y934_PORGI Length = 634 Score = 801 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 259/714 (36%), Positives = 374/714 (52%), Gaps = 94/714 (13%) Query: 21 AACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII 80 A +LP S++EM+ GWD D+IL +GDAYVDHPSFG A+ GR+LEA+G RV I+ Sbjct: 2 AKHHPLTDWLPTSKKEMEAKGWDEADVILFSGDAYVDHPSFGAAVVGRILEAEGLRVAIV 61 Query: 81 AQPDWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDR 139 QP+W DF +LG+P LFFGV+AG MDSM+N+YTA+RRLR +DAYTPD + RPD Sbjct: 62 PQPNWRDDLRDFRKLGRPRLFFGVSAGAMDSMVNKYTANRRLRSEDAYTPDRRSDMRPDY 121 Query: 140 ATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGER 199 T+VYT+ KE + DVPVI+GGIEASLRR HYD Sbjct: 122 PTIVYTRILKELFPDVPVIVGGIEASLRRLTHYD-------------------------- 155 Query: 200 PLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDL 259 + LPG L G + H + L Sbjct: 156 -------------------------YWQDKLLPGILYQSGADLLIYGMGELPLHEIAQRL 190 Query: 260 PCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETN 319 + ++ + + P P E L S E+ DK A R + ++N Sbjct: 191 IAGEPFDSLKSIRQIAYLVPKGKTPVPCENDR-HLFSHEECLSDKRKQAQNFREIEIQSN 249 Query: 320 PGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 A ++Q GD + +NPP P+ST ++D F LPY R+PHP Y I AYEMI+ S Sbjct: 250 RYEADRILQAVGDSTIVVNPPFPPMSTAQIDQSFDLPYTRLPHPRYKGKIISAYEMIKHS 309 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 VN+ RGCFGGC+FC+I+ H+G+ I SRSE S++ E++ I + + F G +SD+GGP+ANM Sbjct: 310 VNVHRGCFGGCAFCTISAHQGKFIASRSEASVLREVKEITE-MEDFKGYLSDVGGPSANM 368 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y ++ + C++ SC++P++CP+++ +H P ++L RR IKK I SGVR D Sbjct: 369 YKMQGYDLSICKRCKKPSCIHPNVCPNLNADHRPLLDLLRRIDKNPKIKKSFIGSGVRMD 428 Query: 500 IAVED----------PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 + + + Y ++L HV G LK+APEH+ + L+ M KP + F + Sbjct: 429 LLLHNYKDKVLKKAADEYTEDLIVKHVSGRLKVAPEHSSDRVLNLMRKPPFRQFAEFTKR 488 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 F ++ G Q LIPYFIS+HPG +EDM LA+ KK F+L+Q+Q+F P+P+ +T Sbjct: 489 FQRINEAHGLRQQLIPYFISSHPGCTEEDMAELAILTKKLDFKLEQIQDFTPTPMTLATE 548 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 MYYTG +P Y + V+ +++ ++ IR+ L +G+ LI Sbjct: 549 MYYTGYHP-----YTLQPVYTAIKKEEKMRQHMFFFWYKREEADKIRRELHRIGRPDLI- 602 Query: 670 SRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSR 723 A+ +R T +HTP P+T + S ++SR Sbjct: 603 -----------------AKLFDRTTSSRNDRHTP-------PSTQPRKSKSKSR 632 >UniRef50_B8DSG7 Radical SAM domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSG7_DESVM Length = 771 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 271/740 (36%), Positives = 392/740 (52%), Gaps = 47/740 (6%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP + EM LGWD D++LV+GDAYVDHP+F MA+ GR L A GFR GI+AQP W Sbjct: 29 FLPTTAREMRDLGWDRLDVLLVSGDAYVDHPTFAMALLGRWLVAHGFRTGIVAQPRWDIP 88 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD R+G+P LF G++AG++DSM+ YTA R+ RHDDA+TP AG RP+RA +VY Sbjct: 89 DDVARMGRPRLFTGISAGSLDSMLAHYTAFRKKRHDDAFTPGGRAGARPNRAAIVYANLA 148 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++A+ +PV+LGGIEASLRR +HYD+W+D +RR +L+D+KAD+L++G GER L++ L Sbjct: 149 RQAFPGLPVVLGGIEASLRRISHYDFWTDALRRPILMDAKADLLVWGMGERALLDATCAL 208 Query: 209 AMGEPISEIRDVRNTAII-----VKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCAD 263 D + A++ + + +PG + + D G+D P AD Sbjct: 209 DAAVETVG-ADAYDAALLPPLAEIFDGIPGTARMGRVTEWDAAPADDAARVTGDD-PDAD 266 Query: 264 NKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCA 323 + + A PP P + + LPS + D L A+ +L + G A Sbjct: 267 ELSNDGQDEGHTAPGAIPPTPP---ISLMRLPSHAAMAEDPRLLMRATLLLERHVHRGDA 323 Query: 324 RALMQKHGD----RYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 RA+ Q D R V + PPA PLS +EMD+++ALP+ R HP++ +PA EMIR S Sbjct: 324 RAI-QPVDDTPTARAVLLAPPAPPLSPDEMDALYALPFARRAHPSHREP-VPAEEMIRTS 381 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + RGC GGCSFCS+ H+GR I SRS S+++E + D + F G +SD+GGP+ANM Sbjct: 382 ITTHRGCGGGCSFCSLALHQGRRIASRSRGSVLDEARRLND-MERFNGSVSDVGGPSANM 440 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 + RC A CRR SC++P +CP + + L R R G++ + +ASGVR+D Sbjct: 441 WQARCTLDPAR--CRRASCMHPRVCPGFAVDQSEAVELLRAVRATPGVRHVRVASGVRFD 498 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 +A+ D ++ GG LK+APEH +G L M KPG+ ++RF F +S AGK Sbjct: 499 LALRDADALRAYTMEFTGGQLKVAPEHICDGVLDLMRKPGLAVFERFLTAFADHSTAAGK 558 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQY++PY +SA PG D+DM L+ WL + QVQ F P+P +T M++ G +P Sbjct: 559 EQYVVPYLLSAFPGCTDDDMRTLSRWLAARGWSPRQVQCFIPTPGTVATAMFFAGIDP-- 616 Query: 620 KIGYKSEDVFVPKGDKQR-RLHKALLR---------YHDPANWPLIRQALEAMGKKHLIG 669 + V V + D R R H+ L+ H P P R ++ G+ + Sbjct: 617 ----EGNPVPVARTDAARLRQHRILIPDFGLPPAAGGHAPG-APGNRAGGKSGGRPNERS 671 Query: 670 SRRDCLVPAPTIEEMREARRQNRNT-----------RPALTKHTPMATQRQTPATAKKAS 718 +D + RQ R + R P + + Sbjct: 672 GGQDHRNHQGRGDRQGRGDRQERGSDADRNRRGHGERSGGKADGRPGGMPDGPGNGDRNA 731 Query: 719 STQSRPVNAGAKKRPKAAVG 738 + + RP + G Sbjct: 732 NRNETRNDKRPDSRPGSRPG 751 >UniRef50_A5IK80 UPF0313 protein Tpet_0582 n=10 Tax=Thermotogaceae RepID=Y582_THEP1 Length = 567 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 249/626 (39%), Positives = 354/626 (56%), Gaps = 71/626 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP +REEM +LGW D+ILVTGDAYVDHPSFG+A+ G L + GF+VGIIAQPDW ++ Sbjct: 2 FLPTTREEMKKLGWRELDVILVTGDAYVDHPSFGVALIGHYLVSHGFKVGIIAQPDWRTE 61 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 D RLG+P LFFGVTAGN+DSM+ YTA ++ R D YTP GKRPDRAT+VYT Sbjct: 62 KDITRLGRPRLFFGVTAGNVDSMVANYTASKKKRKTDDYTPGGSGGKRPDRATIVYTNLI 121 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 K + +VPV+LGG+EASLRR AHYD+WS+ VR+S+L+DSK D+L++G GE+ ++E+A L Sbjct: 122 KRFFPEVPVVLGGLEASLRRFAHYDWWSEKVRKSILIDSKVDLLVYGMGEKAVLEIAQIL 181 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 + I + + VR + G G +LP D Sbjct: 182 SRTGDIEKCKSVRGVVWWSSQKPEG----------------------GIELPSYDEISEN 219 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 P+K YA A ++ T+P + Q Sbjct: 220 PEK-----------------------------------YAEALKLQTWYTDPYKNILIYQ 244 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGCF 387 K RYV NPP +PLS EE+D ++ LP++R HP Y R+ A E ++FS+ +RGCF Sbjct: 245 KQDTRYVVQNPPQLPLSQEELDRLYLLPFEREVHPFYAKMGRVKAIETVKFSITAVRGCF 304 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 G CSFC++T+H+ + RS+DSI+ E+ I F G I+D+GGPTAN+Y C Sbjct: 305 GSCSFCALTQHQTTHVSYRSKDSILEEVR-ILTKKKDFKGTITDVGGPTANLYGSSCSIR 363 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAVEDP 505 + C++ C+YP +C + NH+ I+L R + G++ + ++SG+R+D +A +DP Sbjct: 364 ETKGQCQKF-CLYPSVCKIVRPNHDEFISLLESIRKIPGVRNVFVSSGIRHDFVLAEKDP 422 Query: 506 R-YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI 564 +I+EL + G LK+APEH LS M KP + + FK F+T +K+ GK +Y+I Sbjct: 423 DVFIRELVKY-TPGQLKLAPEHAHPKVLSLMRKPPVELFLEFKRRFETLAKKIGKRKYVI 481 Query: 565 PYFISAHPGTRDEDMVNLALW-LKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 YFI HPG + L + LK + Q+Q F P+P ST MYY+G +P + Sbjct: 482 GYFIVGHPGEGWRENNYLRDFILKHLGYFPQQIQIFTPTPGTVSTAMYYSGLDP-----F 536 Query: 624 KSEDVFVPKGDKQR-RLHKALLRYHD 648 E V V + K R ++ + +L Sbjct: 537 TGEKVHVERSLKVRNKMKENVLFKKK 562 >UniRef50_C7LQA1 Radical SAM domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQA1_DESBD Length = 607 Score = 790 bits (2039), Expect = 0.0, Method: Composition-based stats. Identities = 258/618 (41%), Positives = 357/618 (57%), Gaps = 73/618 (11%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLPM+R EMD LGWD D++LV+GDAYVDHPSF MA+ GR L A G R GII QP W Sbjct: 13 KFLPMTRAEMDALGWDELDVLLVSGDAYVDHPSFAMALLGRALVAHGLRTGIITQPRWDG 72 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 +D + +G+P LF GV+AG +DSM+ YTA R+ R +DAYTP AG RP+RA +VYT Sbjct: 73 PEDLLAMGRPRLFAGVSAGAIDSMLAHYTAFRKKRSEDAYTPGGRAGARPNRACIVYTNL 132 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 + A+ + VILGGIEASLRR HYD+W+D +R+ +L+D+KAD +++G GER + Sbjct: 133 LRRAFPGLTVILGGIEASLRRITHYDFWTDALRKPILLDAKADAVVYGMGERAI------ 186 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L++ + ++ RD+ +PG V GED P Sbjct: 187 LSIADRLAAGRDILG--------IPGTVTV------------------GEDFPAE----- 215 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 + LPS E + D A+ +L + + G A + Sbjct: 216 ------------------------IELPSHEDMLADPKELMRATLLLEKQVHDGTDWA-V 250 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 Q+ +R + + PPA PL+T EMD+++ALP+ R HP Y IPA EMIR SV RGC Sbjct: 251 QRVANRAILVAPPATPLTTTEMDTIYALPFARKAHPGYLLP-IPAEEMIRDSVTSHRGCG 309 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGCSFC++ H+GR I SRS SI++E+ + + P F G +SD+GGP+ANM+ C Sbjct: 310 GGCSFCTLALHQGRRIASRSRASILDEVRRMAAS-PDFKGHVSDVGGPSANMWGASCAKE 368 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 Q C+R SC+ P +CPH + + ++L R R G++ + +ASGVR+D+A++D Sbjct: 369 --GQPCKRPSCMTPTVCPHFRMDQKAHLDLLRTLRRTPGVRGVRVASGVRFDLALKDMDA 426 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 + VGG LKIAPEH + L M KPG ++ F +FD SK+AGKEQY+IPY Sbjct: 427 LGGYLREFVGGQLKIAPEHVCDHVLRLMRKPGNRVFEEFLTIFDRESKRAGKEQYVIPYL 486 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSED 627 +SA PGT D+DM LA WL ++ QVQ F P P A +T MY+ G P + + Sbjct: 487 MSAFPGTTDDDMHALARWLGSRGWKPKQVQCFIPIPGAVATAMYHAGITP------EGKS 540 Query: 628 VFVPKGDKQR-RLHKALL 644 V VP+ D++R R H+ LL Sbjct: 541 VHVPRTDEERLRQHRILL 558 >UniRef50_Q729D8 Radical SAM domain protein n=12 Tax=Proteobacteria RepID=Q729D8_DESVH Length = 680 Score = 784 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 253/726 (34%), Positives = 371/726 (51%), Gaps = 74/726 (10%) Query: 23 CFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQ 82 FLPMSR EM +GWD+ D++L++GDAYVDHP+F A+ GR L A G+R GI+AQ Sbjct: 11 PLAQPRFLPMSRAEMHAIGWDALDVLLISGDAYVDHPTFAAALLGRWLVAHGYRTGIVAQ 70 Query: 83 PDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATL 142 P W++ +D + +G+P LF G+ AG +DSM+ YTA R+ RHDDAYTP AG RP+RA + Sbjct: 71 PRWNTPEDVLCMGRPRLFAGIAAGAIDSMLAHYTAFRKKRHDDAYTPGGKAGARPNRAVI 130 Query: 143 VYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLV 202 VYT ++A+ +PV++GGIEASLRR HYD+W+D++RRS+L+D+KAD+L++G GE L Sbjct: 131 VYTNLLRQAFAGLPVVIGGIEASLRRATHYDFWTDSLRRSILLDAKADLLVYGMGEYALR 190 Query: 203 EVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCA 262 E A R ++E + W G +S Sbjct: 191 EAAARYDAA--MNEGGAATAAEALHGIGGTAWVGTES----------------------- 225 Query: 263 DNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 P + + LPS E + D L A+ + G Sbjct: 226 ---------------------DMPEGASIMRLPSHEDISADVRLLMEATLQQERHVHRGD 264 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 A A+ Q G R V + PPA P+S+E++D ++ALP+ R HP+Y +PA +MIR S+ Sbjct: 265 AWAI-QPVGSRAVIMAPPAPPMSSEDLDRLYALPFTREAHPSYRET-VPAADMIRTSITT 322 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG-VISDLGGPTANMYM 441 RGC GGCSFCS+ H+GR I SRS DS++ EA G ISD+GGP+ANM+ Sbjct: 323 HRGCGGGCSFCSLALHQGRRIASRSRDSVLA--EARDLAAAARKGVSISDVGGPSANMWQ 380 Query: 442 LRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIA 501 RC A+ CRR SC++P +C + + L R RD G++ + +ASGVR+D+A Sbjct: 381 ARCTLNPAK--CRRASCMFPSVCKGFAVDQRKAVRLLREVRDTPGVRNVRVASGVRFDLA 438 Query: 502 VEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ 561 + + ++ GG LK+APEH + L M KPG+ +++F E F +S +AGKEQ Sbjct: 439 LREGEALRAYTMEFTGGQLKVAPEHICDEVLEYMRKPGLPVFEKFLEAFAAFSDEAGKEQ 498 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 Y++PY +SA PG D+ M L+ WL+ + QVQ F P+P +T MY G +P Sbjct: 499 YVVPYLLSAFPGCTDDHMRTLSRWLQARGWSPQQVQCFIPTPGTVATAMYAAGIDP---- 554 Query: 622 GYKSEDVFVPKGDKQRRLHKALLR--YHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 + + V + D +R +L P + + ++ G + Sbjct: 555 --EGNPIPVARTDAERLRQHGILMPDTGRPPSRDADNRR-RGDARQSETGRGKAGTRDGR 611 Query: 680 TIEEMREARRQNRNTRPAL------------TKHTPMATQRQTPATAKKASSTQSRPVNA 727 R+ NR+ + + A +A + + R Sbjct: 612 PHRSDRDTGNANRHDGGRSDRRGGRRDEDRPDRGRRNGARPDGGANRGRADAEERREGRK 671 Query: 728 GAKKRP 733 G KRP Sbjct: 672 GGSKRP 677 >UniRef50_B8J3X2 Radical SAM domain protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3X2_DESDA Length = 746 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 270/750 (36%), Positives = 370/750 (49%), Gaps = 97/750 (12%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 F+PMS EEM LGWD D++ VTGDAYVDH SFG + R L GFR GI+AQP W Sbjct: 37 FVPMSVEEMHALGWDCLDVLFVTGDAYVDHSSFGSVLLARWLIHHGFRAGIVAQPRWDKP 96 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD + +G+P LF G++AG +DS++ YTA R+ RHDDAYTP AG RP+RA LVY Sbjct: 97 DDLLVMGRPRLFAGISAGALDSLLAHYTAFRKKRHDDAYTPGGKAGARPNRACLVYANLA 156 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 + A+ +P+ LGGIEASLRR +HYD+W+D++R+ +L+D+KAD+L++G GE +E A RL Sbjct: 157 RRAFPGLPLALGGIEASLRRVSHYDFWTDSLRKPILMDAKADLLIWGMGEYATLEYARRL 216 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 E R + TA + Sbjct: 217 HKAEDT---RGIPGTAWL-----------------------------------------D 232 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 +Q + P+ + V LPS E + D V ++ L + + A A Q Sbjct: 233 RLEQTPEGPRPAGLPPELAQTPAVPLPSHEDILADPVQLLVMTQALERQVHRLDAWA-FQ 291 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 GDR + + PA PL+TEEMD+++ +P+ R PHP+Y IPA EM+R S+ RGC G Sbjct: 292 PVGDRALVLARPAPPLTTEEMDALYEIPFTRRPHPSYREP-IPAAEMMRTSITSHRGCGG 350 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAI-RDTVPGFTG--VISDLGGPTANMYMLRCK 445 GCSFCS+ H+GR I SRSEDSI+ E + ++ + G ISD+GGPTANM+ C Sbjct: 351 GCSFCSLALHQGRRISSRSEDSILAEARRLGQENMERGKGPVAISDVGGPTANMWQGYCA 410 Query: 446 SPRAEQT--------------------------CRRLSCVYPDICPHMDTNHEPTINLYR 479 R + CRR SC YP IC T + L R Sbjct: 411 LDRMHERGSANRTNPAPAQPRSQAGAEERNTSRCRRTSCCYPTICKFFTTPQGKHVGLLR 470 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 L +K+ IASGVR D+A+ D + GG LK+APEH G LS M KP Sbjct: 471 SVAALPEVKQARIASGVRADLALRDAAALAAYTGEFTGGQLKVAPEHCAPGVLSLMRKPP 530 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + ++ F F SK AG+EQY++PY +S PG D DM LA WL++ + Q Q F Sbjct: 531 LEVFEAFLASFIRQSKAAGREQYVVPYLLSGFPGCTDNDMRTLANWLRERNWNPRQTQCF 590 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL---------RYHDPA 650 P+P +T M+Y GKN ED++V + D QR +L R D Sbjct: 591 IPTPGTIATAMFYCGKN------EAGEDIYVARTDAQRLRQHGILMPGRSSAEARRQDRP 644 Query: 651 NWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT-KHTPMATQRQ 709 N P RQ +A +K +R P E R + +T + + T Sbjct: 645 NRP-DRQGKKAAAEKDATAGKRTA--PGREHGEKRHNGNKTEHTAGSGRSRGTNRPDHPA 701 Query: 710 TPATAKKASSTQSRPVNAGAKKRPKAAVGR 739 P +++ + P + R GR Sbjct: 702 RPDRSRRTAEQ--HPPREAERARDGK-TGR 728 >UniRef50_D1N9W5 Radical SAM domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9W5_9BACT Length = 601 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 253/652 (38%), Positives = 353/652 (54%), Gaps = 69/652 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP SR+EM+Q G+D DI+L+TGD YVDHPSFG+AI GR+LE+ G+RVG+IAQPDW Sbjct: 9 FLPTSRKEMEQAGYDELDILLITGDCYVDHPSFGVAIIGRLLESLGYRVGLIAQPDWKDP 68 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + +G+P + GVT+GNMDSM+N YT RRLR DD ++ + GKRP A VY Q Sbjct: 69 EALKIMGRPRIGCGVTSGNMDSMVNIYTVGRRLRKDDCFSENGEIGKRPPHALTVYAQLV 128 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++A+ + V LGG+EAS RR AHYDYW D +R SVL+DSKAD+L++G GE Sbjct: 129 RQAFPGINVQLGGLEASFRRVAHYDYWQDKIRPSVLIDSKADVLVYGMGE---------- 178 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 + + E LP + Sbjct: 179 -------------------------------------RPTPEVYRRWAEGLP------LD 195 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 + A+ + + + Y+ LPS+E+ DK ++R++ E N R L Q Sbjct: 196 GIRGTARLLGKKAAEAFDPKDQYLELPSYEETLADKDALMTSTRMIEAEMNYLGGRGLFQ 255 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 ++GDR V I PP L+ EE+D V LPY R+PHP Y RIPA+E I+ S+ +RGC G Sbjct: 256 RYGDRIVVIEPPPEVLTPEELDKVHELPYARMPHPKY-KGRIPAFETIKDSIQAVRGCPG 314 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 GC+FC + H+GR + SRSEDSI+ E++AI D P F G +SD+GG N+Y R R Sbjct: 315 GCAFCGLVVHQGRHVMSRSEDSIMRELDAIADQ-PFFKGTVSDVGGAAGNIYQSRYDLER 373 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 + C+R SC+YP CP+ + L RR +K + I SG+R D+A+ P + Sbjct: 374 -CRRCKRSSCLYPAPCPNYTCTGLEIVRLLRRMSAHPKVKHVYINSGIRLDLALRQPELL 432 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 +EL + HV G+LK+APEH L M K + +F ELF+ SK+ GKEQYLIP FI Sbjct: 433 RELISKHVSGHLKVAPEHLNPEVLKLMRKSSAEEFYKFMELFEKISKECGKEQYLIPLFI 492 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 S PG ++M + +L+KH + L QVQ++ P P+ MYYTGK P ++ Sbjct: 493 SNFPGCSGKEMKTVDDFLEKHHWSLQQVQDYIPLPMTMGAAMYYTGKAP------DGREI 546 Query: 629 FVPKGDKQRRLHKALLRYHDPAN-------WPLIRQALEAMGKKHLIGSRRD 673 V +G +RR +L+ N +A G+ G + Sbjct: 547 VVNRGLAERREQIGVLKKRRSGNAINSDPARRCWEKAPRRPGRNRPAGGFKK 598 >UniRef50_C8QZ53 Radical SAM domain protein n=5 Tax=Deltaproteobacteria RepID=C8QZ53_9DELT Length = 606 Score = 706 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 239/623 (38%), Positives = 352/623 (56%), Gaps = 61/623 (9%) Query: 37 MDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGK 96 M Q GW++ D++LV+GDAY+DHPSFG+A+ GR LEA G+RV I+AQP + DDF+R G+ Sbjct: 1 MHQRGWETVDVVLVSGDAYIDHPSFGLALIGRWLEAHGYRVAILAQPRYDRPDDFLRFGR 60 Query: 97 PNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVA----------GKRPDRATLVYTQ 146 P LFFG++AGN+DS++ YT + ++R D Y+PD +RPDRAT++Y Q Sbjct: 61 PRLFFGISAGNLDSIVANYTGNVKVRDRDDYSPDGNPYFGGQAQRRFRRRPDRATIIYAQ 120 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 + + A VP+ILGG+EASLRR HYDY +R SVL D+KAD+L++G GER ++EVA Sbjct: 121 QARRACGQVPIILGGLEASLRRFVHYDYQQRKLRASVLTDAKADLLVYGMGERAVLEVAR 180 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 RL GE + + T + + Y E +P Sbjct: 181 RLEAGE---HLHGIAGTC------------------ERLTPAQLVARGYDESMP------ 213 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 A+A P R P + +LP +E++ DK + A R + + L Sbjct: 214 -------ARASAPDPERAGPAH--FKVLPGYEQIMVDKSHFLAAEREIDRQARARQPAML 264 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC 386 +Q+ +++ +PPA PL EE+D ++ALPY R PHP G R+PA+ M+R SV I+RGC Sbjct: 265 LQRQQAQWLLQHPPAAPLRPEELDRLYALPYARRPHPQAG--RVPAFTMVRDSVTIVRGC 322 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 G C+FC+IT H+G + SRS +SII E+ I P F G I+DLGGPTAN+Y C Sbjct: 323 CGNCAFCAITRHQGGRVVSRSRESIIAEVAQI-AQAPDFRGTITDLGGPTANLYG--CSC 379 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 R ++ C R C+YPD+C + + + + L + A + G++ +L++SG+R ++ ++ PR Sbjct: 380 SRRKEGCSRRDCLYPDVCRELRIDEDTLLELLQAAAAVAGVRHLLVSSGLRMELLLKTPR 439 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY---- 562 ++ L HH G LKIAPEHTE L M KP ++F + F+ + + + Sbjct: 440 LLRRLLEHHTPGTLKIAPEHTEPEVLRLMHKPDGSVLEKFVQTFNRLAAELARRSEKKPP 499 Query: 563 -LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 L PY ISAHPG M + L+K Q Q+F P+P +T +Y +G +P + Sbjct: 500 TLNPYLISAHPGCTMAHMEEMVRKLQKLNLVPRQFQDFTPTPGTLATAIYVSGLDPAS-- 557 Query: 622 GYKSEDVFVPKGDKQRRLHKALL 644 V VPKGD++RR + +L Sbjct: 558 ---GRPVHVPKGDQERRRQRLVL 577 >UniRef50_B0VIP9 Radical SAM domain protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIP9_9BACT Length = 547 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 234/622 (37%), Positives = 331/622 (53%), Gaps = 83/622 (13%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 PFLP+++ ++ + WD DIIL++GDAY+DHPSF AI GR LEA GFRVGII QPDW + Sbjct: 2 PFLPVNQSDLKERDWDYLDIILISGDAYIDHPSFAAAIIGRTLEAAGFRVGIIPQPDWRN 61 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 F LGKP LFFG+TAGNMDSM+N YTA R+LR+DDAY+PD ++GKRPDRA Sbjct: 62 DSSFTVLGKPRLFFGITAGNMDSMVNHYTAQRKLRNDDAYSPDGISGKRPDRA------- 114 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 ++++ N + R Sbjct: 115 -------------------------------------------IIIYTN-------IIKR 124 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L G PI + ++ D R YG + + Sbjct: 125 LFKGVPIV----IGGIESSLRRIAHYDFWQDKVRNSILADSKGDILIYGMGERPVTDLAI 180 Query: 268 APKKQEAKAVTVQPPRPKPWEKTY-----VLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 +K + P + T+ ++LP EK K + +R + Sbjct: 181 LLQKGVPVSSIQNLPSTVVFSSTFPAKEDIILPEAEKCSA-KETFYQMTRQFE---DNYR 236 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 + + QK+ R++ NPPA PL+T+EMDS++ALP+ PHP Y +IPAYE I+ S+ Sbjct: 237 TKTIFQKNAGRWLKHNPPAKPLTTKEMDSIYALPFAYQPHPVYAGHKIPAYEQIKDSITS 296 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 RGC+GGC+FC+I H+GR IQSRSE S++ E + TG ISD+GGPTANMY Sbjct: 297 HRGCYGGCNFCAIACHQGRNIQSRSETSLLKEAQK-------HTGTISDVGGPTANMYAS 349 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 C E TC+R SC+ PDICP++ NH + + + +L IK + IASG+RYD+AV Sbjct: 350 FCGLDFPE-TCKRNSCLVPDICPNLQINHSVQLEILAKIGNLPRIKHLFIASGIRYDMAV 408 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 D YI+ LAT + GG LK+APEH+ L M KP + +++F + F Y+ +AG + Sbjct: 409 NDDNYIEALATKYTGGRLKLAPEHSVSSVLRLMNKPQIEVFEKFCKKFYFYTNKAGLKSQ 468 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 +IPY I HPGT ED L WL+K++ +++QVQ F P+P+ ST MYYTG + Sbjct: 469 IIPYLIIGHPGTTMEDAFELRNWLRKNKLKVEQVQEFTPTPMTISTCMYYTGLD-----Y 523 Query: 623 YKSEDVFVPKGDKQRRLHKALL 644 + + +PK + RR + ++ Sbjct: 524 ETGKPIHIPKPSEIRRQKELII 545 >UniRef50_Q8R682 UPF0313 protein FN0734 n=26 Tax=Bacteria RepID=Y734_FUSNN Length = 568 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 211/632 (33%), Positives = 316/632 (50%), Gaps = 71/632 (11%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP ++EEM LGWDS D++L++GD Y+D G + G+ L GF+VGIIAQP+ Sbjct: 2 KFLPTTKEEMKNLGWDSIDVLLISGDTYLDTSYNGSVLVGKWLVEHGFKVGIIAQPEVDV 61 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 DD RLG+PNLFF V+ G +DSM+ YTA ++ R D +TP V KRPDRA Sbjct: 62 PDDITRLGEPNLFFAVSGGCVDSMVANYTATKKRRQQDDFTPGGVNNKRPDRA------- 114 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 +L++ N + R Sbjct: 115 -------------------------------------------VLVYSN-------MIRR 124 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 G + +++ W+ + K D + + GE + Sbjct: 125 FFKGTTKKIVISGIESSLRRITHYDYWTNKLRKPILFDAKADILSYGMGE-MSMLQLANA 183 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 ++ K + K ++ Y+ LPS + DK + A + +P A+ L Sbjct: 184 LKNGEDWKNIKGLCYLSKEMKQDYLSLPSHSECLADKDNFIEAFHTFYLNCDPITAKGLC 243 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGC 386 QK DRY+ NPP+ S E MD ++++ + R HP Y + A + I++SV RGC Sbjct: 244 QKCDDRYLIQNPPSESYSEEIMDKIYSMEFARDVHPYYKKMGAVRALDTIKYSVTTHRGC 303 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 +G C+FC+I H+GR I SRS+ SI+ E++ I T P F G ISD+GGPTANMY L CK Sbjct: 304 YGECNFCAIAIHQGRTIMSRSQSSIVEEVKNIAGT-PKFHGNISDVGGPTANMYGLECKK 362 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 C C+YP C H+ NH + L ++ + + IKKI IASG+RYD+ ++D + Sbjct: 363 KLKLGACPDRRCLYPKKCLHLQVNHNNQVELLKKLKKIPNIKKIFIASGIRYDMILDDNK 422 Query: 507 ----YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 Y+KE+ H+ G +KIAPEHTE+ L M K G + FK F + + GK+Q+ Sbjct: 423 CGQMYLKEIIKDHISGQMKIAPEHTEDKILGLMGKDGKSCLNEFKNQFYKINNELGKKQF 482 Query: 563 LIPYFISAHPGTRDEDMVNLALWL-KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 L Y I+AHPG +D+DM++L + ++ R +QVQ F P+P ST MYYT K+P Sbjct: 483 LTYYLIAAHPGCKDKDMMDLKRYASQELRVNPEQVQIFTPTPSTYSTLMYYTEKDP---- 538 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDPANWP 653 + ++ +FV K + +++ K ++ N Sbjct: 539 -FTNQKLFVEKDNGKKQKQKDIVT-EKRKNRK 568 >UniRef50_D1J9C3 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9C3_9ARCH Length = 499 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 183/601 (30%), Positives = 307/601 (51%), Gaps = 107/601 (17%) Query: 46 DIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTA 105 +II VTG+ ++DHP G+AI R+LE +G+++G+I +P + +++ +LG+P LFFGV++ Sbjct: 4 EIIFVTGEIFLDHPLCGVAILKRVLEKEGYKIGVIEKP--TKEEEIRKLGRPKLFFGVSS 61 Query: 106 GNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEAS 165 G++DSM+ YT ++ R +D + DRAT V++ K ++ ++LGG EAS Sbjct: 62 GSIDSMVRNYTPLKKSRAEDE--TQDYHEVVLDRATTVFSNWIKHQFRGSILVLGGTEAS 119 Query: 166 LRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAI 225 LRR HYDYW + +R+ +L D++AD++ +GN E+ ++E+A RL P+ +I Sbjct: 120 LRRFVHYDYWQNRLRKPILFDTRADIISYGNSEKQILEIAERLKNDLPLYDI-------- 171 Query: 226 IVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPK 285 PG + +++T Sbjct: 172 ------PGTCIITKEKVNTAK--------------------------------------- 186 Query: 286 PWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLS 345 LP++E++ +K + +L L+QK +RY+ + + Sbjct: 187 -------ELPNYEELMNEKERFCDMQNMLT------NTEDLIQKIDNRYLLQ-YKSPKYT 232 Query: 346 TEEMDSVFALPYKRV-PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQ 404 T+++D + L + R P G FSV RGC G C+FCS+ +G I Sbjct: 233 TKDLDEYYELKFTRELPKELSG---------FEFSVITHRGCIGDCNFCSVNLIQGDKII 283 Query: 405 SRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDIC 464 SRSE+SI+ EI+AI +P FTG I DLGGP+ANMY + C + SC+ C Sbjct: 284 SRSEESILREIKAIT-KLPHFTGNIDDLGGPSANMYGMDCNKCNS-------SCI---DC 332 Query: 465 PHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP 524 +D +++ + L R+ R ++G+KK+ I SG+R+D+ P YI+E+ +H+ ++IAP Sbjct: 333 NVLDRSNKRMVGLLRKVRKVEGVKKVNIRSGIRFDLTT--PEYIEEITKYHLFNTVRIAP 390 Query: 525 EHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLAL 584 EH + L M K G +F F +++ L YF++AHPG+ ++ LA Sbjct: 391 EHVNKNVLKLMNK-DKGDLKKFMLEFKKTNRK------LSFYFMTAHPGSTMKEAKELAR 443 Query: 585 WLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL 644 +K+ + + VQ F P+P+ ST MYYTG +P K + ++VP +++ K ++ Sbjct: 444 AIKRLK-NAESVQIFTPTPMTVSTCMYYTGMDPKTK-----KKIYVPYTYSEKKEQKRII 497 Query: 645 R 645 Sbjct: 498 F 498 >UniRef50_B0TIH7 Radical sam protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TIH7_HELMI Length = 339 Score = 434 bits (1116), Expect = e-120, Method: Composition-based stats. Identities = 157/340 (46%), Positives = 206/340 (60%), Gaps = 48/340 (14%) Query: 27 APFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWS 86 APFLP+S+ EM++LGWD+CD ILVTGDAYVDHPSFG AI GR+LE +G+RVGII+QPDW Sbjct: 7 APFLPLSKAEMNELGWDACDFILVTGDAYVDHPSFGAAIIGRVLENRGYRVGIISQPDWR 66 Query: 87 SKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQ 146 F LG+P L + VTAGN+DSM+N YTA ++ R +DAY+P AG RPDRA+LVY Sbjct: 67 DLRSFKVLGRPRLAWLVTAGNLDSMVNHYTAAKKRRSEDAYSPGGRAGLRPDRASLVYAH 126 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 RC+EA+K+ P+ILGGIEASLRR AHYDYW D VRRSVLVD+KAD+L+FG GE P+ +A Sbjct: 127 RCREAYKEPPIILGGIEASLRRFAHYDYWEDRVRRSVLVDAKADLLVFGMGEEPITALAE 186 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 L+ E A Sbjct: 187 ELSRRRSGEEFMHPLG---------------------------------------AKTAG 207 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 V + A+ + P ++LP +++V DK YA A ++ E NP + L Sbjct: 208 VCYLTSDLAAIPGEAP---------IVLPGYDEVASDKWAYAKAFQVQEREQNPVDGKTL 258 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG 366 Q HG+ ++ N PA PL+T+EMD+++ALP+ R PHP+Y Sbjct: 259 AQPHGELFLVQNRPARPLTTKEMDAIYALPFARRPHPSYE 298 >UniRef50_D1TTB0 Conserved domain protein n=10 Tax=Yersinia RepID=D1TTB0_YERPE Length = 270 Score = 307 bits (787), Expect = 9e-82, Method: Composition-based stats. Identities = 170/223 (76%), Positives = 187/223 (83%) Query: 516 VGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTR 575 +GGYLKIAPEHTEEGPLSKMMKPGMGSY RFKELFDTYSKQAGKEQYLIPYFISAHPGT Sbjct: 1 MGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTE 60 Query: 576 DEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDK 635 D+DMVNLALWLKK+RFRLDQVQNFYPSPLANSTTMYYTGKNPLAK+ YKSE+V VPKGD+ Sbjct: 61 DKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDR 120 Query: 636 QRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTR 695 QRRLHKALLRYHDPANWP++R ALE MG +HLIG+RR+CLVPAPT+EE REARR R+ Sbjct: 121 QRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHT 180 Query: 696 PALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVG 738 PALTKHT + QRQ A AS+ + P A + Sbjct: 181 PALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSA 223 >UniRef50_Q3XWG2 Putative uncharacterized protein n=1 Tax=Enterococcus faecium DO RepID=Q3XWG2_ENTFC Length = 161 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 579 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 638 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR Sbjct: 1 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 60 Query: 639 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 698 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL Sbjct: 61 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 120 Query: 699 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 739 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR Sbjct: 121 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 161 >UniRef50_D2YQ88 UPF0313 protein n=1 Tax=Vibrio mimicus VM573 RepID=D2YQ88_VIBMI Length = 211 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 84/164 (51%), Positives = 103/164 (62%), Gaps = 7/164 (4%) Query: 579 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS-EDVFVPKGDKQR 637 MVNLALWLK + +R DQVQNFYPSP+ N+T MY+ NPL ++ YK E V V KG+ QR Sbjct: 1 MVNLALWLKSNNYRCDQVQNFYPSPMCNATAMYHAEVNPLKRVKYKKPEKVPVAKGEAQR 60 Query: 638 RLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPA 697 RLHKALLRYHDPANWP+IR+AL AMGK+HLIG R +CL+P + + A+ + A Sbjct: 61 RLHKALLRYHDPANWPMIREALIAMGKRHLIGDRPECLIPEKDSDLVTPAQSRKSGRHGA 120 Query: 698 L---TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVG 738 TKHT +Q A S Q RP N+G K G Sbjct: 121 NRFATKHT--HSQPGFDALRGNKSGGQGRP-NSGNKSNQGKPTG 161 >UniRef50_UPI0001910DF7 hypothetical protein Salmonellaentericaenterica_48021 n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI0001910DF7 Length = 100 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 95/100 (95%), Positives = 98/100 (98%) Query: 184 LVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLD 243 LVDSKADMLMFGNGERPLVEVAHRLAMGE I +IRDVRNTAI+VKEALPGWSGVDSTRLD Sbjct: 1 LVDSKADMLMFGNGERPLVEVAHRLAMGETIDQIRDVRNTAIMVKEALPGWSGVDSTRLD 60 Query: 244 TPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPR 283 TPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA+TVQPPR Sbjct: 61 TPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAITVQPPR 100 >UniRef50_B9TGP5 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TGP5_RICCO Length = 302 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 44/103 (42%), Positives = 60/103 (58%) Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 +A +TTMY++GKNPL K+ SE+V K K R+LHKA LRY+DP NWP++R+ L+ MG Sbjct: 1 MAMATTMYHSGKNPLHKVTEDSEEVLTAKSGKTRKLHKAFLRYYDPENWPVLREGLKRMG 60 Query: 664 KKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMAT 706 + LIG+ LVP E+ +R R A P Sbjct: 61 RGDLIGNGERHLVPPAGSEQEVAPQRGERRPPVAPRSEAPKGR 103 >UniRef50_UPI0001C35963 hypothetical protein ChatD1_27829 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35963 Length = 119 Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 ST MYYTG +P E V+VP ++ + +AL++Y +P N+ L+ +AL+ G+ Sbjct: 2 TISTCMYYTGYDP-----RTMEKVYVPTNPHEKAMQRALIQYRNPKNYDLVEEALKKAGR 56 Query: 665 KHLIGSRRDCLVPAPTIEEMREARRQNRN-TRPALTKHTPMATQRQTPATAK 715 LIG + CL+ + A +K + K Sbjct: 57 TDLIGYDKKCLIRPRYSGGGAYGGGTKPGSGQAAGSKGPGKQRDDKRTGKKK 108 >UniRef50_O27239 Phosphonoacetaldehyde methylase n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27239_METTH Length = 438 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 79/232 (34%), Gaps = 46/232 (19%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + RGC G C+FC + E GR ++SR II E+ ++ + IS G T + Sbjct: 159 IETHRGCPGNCTFCQVPEFFGRNVRSRPLKDIIMEVRELKSSGAR-RFAIS---GGTGTL 214 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y + E +L R ++ G + + + +R D Sbjct: 215 YGSS---------------------KFRGIDEEAFRDLLRCISEVTGSRNLTVPD-IRVD 252 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK---PGMGSYDRFKELFDTYSKQ 556 + P + + + G++ E L KM K P EL Y+ + Sbjct: 253 MV--SPEILDA-ISEYTNGWVFYGIESGSRRMLRKMKKGITPDQVV--EAVELAREYNLK 307 Query: 557 AGKEQYLIPYFISAHPGTRDED---MVNLALWLKKHRFRLDQVQNFYPSPLA 605 FI +PG D+D + LA L + V P P Sbjct: 308 VAGS------FIVGYPGEDDDDYQETLELADELMLDDYF---VSIAEPLPGT 350 >UniRef50_Q8TX78 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyrus kandleri RepID=Q8TX78_METKA Length = 435 Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/262 (17%), Positives = 88/262 (33%), Gaps = 42/262 (16%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI-RDTVPGFTGVISDLGGPTAN 438 + RGC G C+FC + E GR ++ + ++++ E+ + R F + G T Sbjct: 168 IETHRGCPGACTFCQVPEFFGRRVRWKPVEAVLEEVRELTRGGARRFA-----ISGGTVT 222 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y + E + L +R DL G + + A VR Sbjct: 223 TYGD---------------------------DEEDFVELLKRLADLLGRENVS-APDVRA 254 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAG 558 D+ + E + G++ + E + L M K + D E + ++ G Sbjct: 255 DLL---NERLLEAIRDYTIGWIFLGIESGSDRILRAMRK--GITVDDVCEAVE-LARTVG 308 Query: 559 KEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPL 618 + FI +PG ++D+ L + + P P + Sbjct: 309 VR--VAGSFIVGYPGETEDDLEATEELLTELNLDDVFINLAEPIPGTELGRLVTELPEEE 366 Query: 619 AKIGYKSEDVFVPKGDKQRRLH 640 + E + GD+ +L Sbjct: 367 IPVLRPGEQLETEAGDRALQLQ 388 >UniRef50_Q2FRN7 Radical SAM n=3 Tax=Methanomicrobia RepID=Q2FRN7_METHJ Length = 444 Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 99/266 (37%), Gaps = 46/266 (17%) Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV--ISDLGG 434 + + RGCFG C FC + GR I+SR D I+ E++A + GV ++ +GG Sbjct: 166 QTYIETHRGCFGRCGFCQVPRVFGRRIRSRELDEILKEVKAFQK-----KGVRRLALIGG 220 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 T ++Y + N + I+L + G K + Sbjct: 221 -TGSLYRS----------------------KEGEVNSDAFISLLEGISSIMGPKNVSCPD 257 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 +R D ++ + E H G++ E E L M K G+ D+ ++ + Sbjct: 258 -IRADCLTDE---VLEAVRAHTIGWIFFGIESGSEKMLGLMQK-GIPI-DKVRDAIEQ-C 310 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 +Q G + FI+ +PG +ED +++ + P P + Sbjct: 311 RQYGVKP--AGSFITGYPGEEEEDFQATKDLMEELTLDDVFISIAEPIPSTPLAEV-VCS 367 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLH 640 +NP + V VP + LH Sbjct: 368 QNP------DMDLVSVPHTGEYAGLH 387 >UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Clostridiales RepID=RIMO_SYMTH Length = 485 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 95/306 (31%), Gaps = 58/306 (18%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GC C+FCSI GR +SR +SI++E + VIS Y L Sbjct: 171 GCDCACAFCSIPLMRGRH-RSRPIESIVDEARRLAGMGVRELVVISQ----DTTYYGLD- 224 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE- 503 +Y L R + GI+ I I Y Sbjct: 225 --------------LYRKP---------MLARLLRELAQVDGIRWIRI----HYSYPTRI 257 Query: 504 DPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGS-YDRFKELFDTYSKQAGKEQ 561 I+ + T V YL + +H L M +P Y R + Sbjct: 258 TDELIEVIVTEPKVLNYLDLPLQHGSNRVLRIMNRPANAEGYLRLVQKLRERVPDICLRS 317 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 FI+ HPG +ED L +L+ F V + + M Sbjct: 318 T----FIAGHPGETEEDFELLLDFLRACEFDHVGVFAYSQEEGTKAGQM----------- 362 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDP----ANWPLIRQALEAMGKKHLIGSRRDCLVP 677 E+V + + D+ + + + R + ++ + G+ +G C Sbjct: 363 EQLPEEVRLARRDRAMEVQQEIARRRNQLQVGRELEVLVEGRSPQGRGWFVG---RCYGQ 419 Query: 678 APTIEE 683 +P I+ Sbjct: 420 SPGIDG 425 >UniRef50_Q8TX87 Fe-S oxidoreductase family protein n=1 Tax=Methanopyrus kandleri RepID=Q8TX87_METKA Length = 402 Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 56/275 (20%), Positives = 91/275 (33%), Gaps = 56/275 (20%) Query: 340 PAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHE 399 P E++D P Y I SV I RGC GC+FC +T Sbjct: 130 PQPAPRVEDLDRF----------PPYSEGF-----RIFCSVEITRGCPWGCAFCQVTRLF 174 Query: 400 GRIIQSRSEDSIINEIEAIRDTVPG-FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSC 458 G ++ RS + ++ + + F + P A Y +R Sbjct: 175 GPKLRHRSVEDVVRWVRRGVERYGHTFARFV----APDALAYGSPDGIRLKPDRVKR--- 227 Query: 459 VYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS---GVRYDIAVEDPRYIKELATHH 515 L R R ++G++K+ S +R D + EL H+ Sbjct: 228 ------------------LLRSLRSIEGLEKVFFGSFPAELRPDSIAKGDAI--ELIAHY 267 Query: 516 VGG-YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGT 574 + I + E L ++ + G E+ + + G + + FI PG Sbjct: 268 ADNERVNIGAQSGSERVLKRIER---GHTVEDVEVAVEKALEVGLKPVVD--FIFGLPGE 322 Query: 575 RDED---MVNLALWLKKHRFRLDQVQNFYPSPLAN 606 +ED V LA W+ K + + F P P Sbjct: 323 TEEDQLASVELARWIIKRGGEVR-LHYFMPLPGTP 356 >UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bacteroidales RepID=D1PVJ2_9BACT Length = 443 Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 76/215 (35%), Gaps = 40/215 (18%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI-RDTVPGFTGVISDLGGPTAN 438 + I GC C++C+I GR SRS + I+ E++ + + V F + +L Sbjct: 152 IKIAEGCDRHCAYCAIPLMTGRH-TSRSMEDILEEVKQLVAEGVKEFQIIEQEL-----T 205 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI-NLYRRARDLKGIKKILIASGVR 497 Y +D + +P I L R D+ G+K I + Sbjct: 206 YYG-------------------------VDIDGKPRIAELISRMADIPGVKWIRLHYAYP 240 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTYSKQ 556 +E ++E +V YL IA +H + LS+M Sbjct: 241 NQFPLELLDVMRE--KPNVCKYLDIALQHISDHVLSRMLRHVSKAETLELIRKIRQEVPG 298 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 L + PG +ED L ++++ RF Sbjct: 299 ITLRTTL----MVGFPGETEEDFQELLDFVREVRF 329 >UniRef50_Q58275 Putative methylthiotransferase MJ0865 n=11 Tax=Methanococcales RepID=Y865_METJA Length = 449 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 81/226 (35%), Gaps = 36/226 (15%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + RGC G C+FC + + G+ I+SR + ++ E++A + IS G T ++ Sbjct: 171 IETHRGCLGNCTFCQVPKFFGKTIRSRDVEDVVEEVKAFKRAGAK-RIAIS---GGTGSL 226 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y + S N + L + ++ G + + +R D Sbjct: 227 YAF------------KKS-----------INRDKFFELLEKVSEVIGKNNLSVPD-MRVD 262 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 E+ I E ++ G++ E + L M K ++ + +K G Sbjct: 263 YVDEE---ILEAIKNYTIGWVFYGIESGSDKILKDMKKGTNR--EKNLDAI-KLAKDCGV 316 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 + + FI A+P + D + ++ V P P Sbjct: 317 K--VAGSFIVAYPTETEMDYLLTKDFIVDAELDDVFVSIAEPIPTT 360 >UniRef50_A7H5G3 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Epsilonproteobacteria RepID=RIMO_CAMJD Length = 439 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 92/270 (34%), Gaps = 42/270 (15%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTAN 438 + I GC CSFC+I +GR ++SR +SII E++ + F+ + D Sbjct: 140 IKIAEGCNQKCSFCAIPSFKGR-LKSRQINSIIAELKDLVARGYKDFSFIAQDT------ 192 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 S ++ + L R +++ IK I A + Sbjct: 193 -----------------SSYLF---------DKGEKDGLIRLIDEVEKIKGIRAARILYL 226 Query: 499 DIAVEDPRYIKELATHHVG-GYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 IK + + Y + +H + L M + + R KE+ + ++ Sbjct: 227 YPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMKRGTNST--RLKEMLNLM--KS 282 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 +L FI HPG + D L ++K F V + + M Sbjct: 283 APNSFLRTGFIVGHPGESEADFEKLCEFVKDFGFDRVSVFAYSKEEDTAAFDMEQVPFKV 342 Query: 618 LAKIGYKSEDV---FVPKGDKQRRLHKALL 644 + K E + + K ++ K L+ Sbjct: 343 INKRLKIIEKIVDEVIEKSFEKEVEQKRLV 372 >UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKJ7_CALS8 Length = 434 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 94/264 (35%), Gaps = 52/264 (19%) Query: 357 YKRVPHPAYGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEI 415 YKR + +I ++ E R + I GC CS+C I G ++ SRS SI++E+ Sbjct: 125 YKRD---TFEELKISSFNERTRAFIKIEEGCEQFCSYCIIPYARGSVV-SRSLSSILDEV 180 Query: 416 EAIRDT-VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 + + F VI+ + N+ + Sbjct: 181 QRLASNGYKEF--VITGI-----NI--SAYGKDLDYKV--------------------TL 211 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELAT-----HHVGGYLKIAPEHTEE 529 +++ ++ +++I ++S + V +IK L HH+ +L + + + Sbjct: 212 VDVIEEISKIEKVRRIRLSS---LEPIVMKEDFIKRLVKIEKLCHHL--HLSL--QSGSD 264 Query: 530 GPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKK 588 L M + Y + E+ Y + I PG DED ++K+ Sbjct: 265 KILKLMNRHYTTDEYRQIVEMVRGYWNDVAFTTDI----IVGFPGESDEDFERTVEFVKE 320 Query: 589 HRFRLDQVQNFYPSPLANSTTMYY 612 F V F P N+ M Y Sbjct: 321 IGFSRIHVFRFSPKKGTNAYNMPY 344 >UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Cystobacterineae RepID=MIAB_ANASK Length = 464 Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 60/306 (19%), Positives = 95/306 (31%), Gaps = 70/306 (22%) Query: 345 STEEMD-SVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRII 403 T MD + P P R+ A+ V M+GC C+FC + GR + Sbjct: 147 ETGWMDSEEYVFP---RADPEAARGRVTAF------VTAMKGCDNVCAFCIVPHTRGREV 197 Query: 404 QSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 SR ++ E A+ +I G N Y C Sbjct: 198 -SRPFPDVVAECAALAGVGVREVTLI----GQNVNSYTGGCT------------------ 234 Query: 464 CPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIA 523 +L RR + GI +I + +D++ ++ K+ Sbjct: 235 ----------FADLLRRVAAVPGIDRIRFTTSHPHDLSDALVEVFRD--------EPKVM 276 Query: 524 PE-HT-----EEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDE 577 P H + L +M + S + + FD + A + FI PG D Sbjct: 277 PHFHLPVQSGSDAVLRRMRRD--YSVAEYLDRFDRL-RAARPGIAITTDFIVGFPGETDA 333 Query: 578 DMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQR 637 D L++ RF F P P + ++G E VP+ Sbjct: 334 DFEASLALLERARFEQSFSFVFSPRPHTVAA----------VRLGSAPEWRDVPREAAVA 383 Query: 638 RLHKAL 643 RL + L Sbjct: 384 RLERLL 389 >UniRef50_B0SGD8 Ribosomal protein S12 methylthiotransferase rimO n=7 Tax=Leptospira RepID=RIMO_LEPBA Length = 448 Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 84/243 (34%), Gaps = 61/243 (25%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDS--IINEIEAIRDTVPGFTGVISDLGGPTA 437 V I GC GC FC I G+ R DS ++ + + Sbjct: 161 VKISDGCNRGCHFCIIPNLRGK---YRDTDSNDVLEQTK--------------------- 196 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 A + + C+ + + ++L R ++G++ + + Sbjct: 197 ----------LAVKAGSKEICLVSQDTVFYGKDTDKLMDLVRSVAAVEGLEILRL----- 241 Query: 498 YDIAVEDPRYIKELATHH--VGGYLKIAP------EHTEEGPLSKMMKPGMGSYDRFKEL 549 + + + ++L + + KIAP +H + L M + G Y+ FK L Sbjct: 242 --LYLYPDKKTEKLLDLYREIP---KIAPYLESPLQHVSKSVLKSMNRTG--DYEFFKSL 294 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF--YPSPLANS 607 F ++ + + FI PG ED+ + +++ + ++V F P Sbjct: 295 FQK-ARDIRPDLEIRTSFILGFPGETMEDVEEIIRFVED--VKPEKVNLFPYSPQEGTKG 351 Query: 608 TTM 610 TM Sbjct: 352 ATM 354 >UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2J3_9BACT Length = 452 Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 54/236 (22%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GC C++CSI GR +++R +S++ E + + G + +L L Sbjct: 164 GCNNRCTYCSIPGIRGR-LRTRPMESVVREARNLIE------GGVREL---------LVI 207 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED 504 R + + L L+G + +R + Sbjct: 208 AQDITVYGNDRPE------------SGDTLARLLTALNALEG---NFV---IRL-LYTHP 248 Query: 505 PRYIKELATHHVGGYLKIAP------EHTEEGPLSKM-----MKPGMGSYDRFKELFDTY 553 Y +E G K+ P +H + L +M K + +E Sbjct: 249 AHYTEEFIDFMARGNTKVLPYLDIPLQHISDRILKQMNRHVTRKQTEELLTKLRERIPGL 308 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 + + FI+ PG +E+ L + KK +F V + P P + Sbjct: 309 TLRTT--------FITGFPGETEEEYQELKSFAKKFKFERCGVFPYSPEPRTPAAA 356 >UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacteria RepID=B9KY11_THERP Length = 458 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 59/304 (19%), Positives = 103/304 (33%), Gaps = 74/304 (24%) Query: 360 VPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIR 419 +PH Y + A + V ++ GC CS+C + GR +SR + ++ E+E + Sbjct: 145 LPH-YYDEGQ--ADPEVTAFVPVIYGCNFVCSYCIVPYRRGRE-RSRPVEQVVAEVEKLA 200 Query: 420 DTVPGFTGV--ISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 GV ++ LG T N Y H +L Sbjct: 201 A-----RGVREVTLLG-QTVNAYG------------------------HDLPGQPDLADL 230 Query: 478 YRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK 537 R D+ GI++ +R+ P+Y + V K+ EH Sbjct: 231 LERVHDVPGIER------IRF--LTSHPKYFSDKLIRAVADLPKVC-EHVNLPV----QS 277 Query: 538 PGMGSYDRFKELF--DTYSKQAGKEQYLIPY------FISAHPGTRDEDMVNLALWLKKH 589 R + + + Y ++ + + LIP I PG +E +N L++ Sbjct: 278 GDNEVLRRMRRHYTVEEYRERIARIRELIPDVTLSTDIIVGFPGETEEQFLNTYRLLEEI 337 Query: 590 RFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDP 649 RF V + P P S VP+ +++RR H+A+ + + Sbjct: 338 RFDKVHVAMYSPRPGTLSARW----------------PDDVPR-EEKRRRHRAVEQLQER 380 Query: 650 ANWP 653 Sbjct: 381 IARE 384 >UniRef50_C5CDI9 MiaB-like tRNA modifying enzyme n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDI9_KOSOT Length = 425 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 48/243 (19%), Positives = 83/243 (34%), Gaps = 53/243 (21%) Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPT 436 R + I GC CS+C I G I S+ + + E++ + + GF ++ L G Sbjct: 132 RAYIGIQDGCLNNCSYCRIRLARGNKIISKPPEVVAEELKTLVEH--GFQEIV--LTGIN 187 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 Y I+L ++ ++G ++ ++S Sbjct: 188 IGFYGFG--------------------------EGYSLISLLKQLVKIEGEWRLRLSS-- 219 Query: 497 RYDIAVEDPRYIK-ELATHHVGGYLKIAPEHT-------EEGPLSKM-MKPGMGSYDRFK 547 DPR + EL T + KIA +H + L M ++ Sbjct: 220 ------LDPRLVSNELIT-FMTDNPKIA-QHVHLSLQSGSDKVLKSMNRNYTTNDVEQIV 271 Query: 548 ELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANS 607 LF + + + + I PG D D V ++K+ RF + F P P + Sbjct: 272 ALFRSRNNRFSFTTDV----IVGFPGETDTDFVETLEFVKRIRFLKVHIFRFSPRPGTKA 327 Query: 608 TTM 610 M Sbjct: 328 ARM 330 >UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Clostridia RepID=MIAB_PELTS Length = 448 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 119/366 (32%), Gaps = 85/366 (23%) Query: 363 PAYGNA-----RIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA 417 P YG + E +R V IM GC C++C + GR +SRS +++ E+ Sbjct: 130 PGYGGELREELPVKRKEGVRAWVTIMYGCNNFCTYCIVPYVRGRE-KSRSPEAVYEEVAR 188 Query: 418 IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 + GF VI L G N Y + +L Sbjct: 189 LAG--EGFKEVI--LLGQNVNSYG-----------------------KDLGVK-TDFASL 220 Query: 478 YRRARDLKGIKKI-LIASGVRYDIAVEDPRYI---KELATHHVGGYLKIAPEHTEEGPLS 533 ++ GI +I + S R D ++ I K++ H +L + + L Sbjct: 221 LESLENIDGIDRIRYMTSHPR-DFSLRLVEAIAASKKVCEHF---HLPV--QAGSNRILK 274 Query: 534 KMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY------FISAHPGTRDEDMVNLALWLK 587 KM + + + + +L + LIP+ + PG DED + ++ Sbjct: 275 KMNR--GYTREEYVDLIRYI-------KSLIPHATVTTDIMVGFPGETDEDFNDTLDLVR 325 Query: 588 KHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYH 647 + RF + P + M V + K+ R+ AL++ Sbjct: 326 EIRFDSAYTFVYNIRPGTPAAEM----------------PDQVAENVKKERIQ-ALIKLQ 368 Query: 648 DPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQ 707 + + + +G ++ LV +NR + + P Sbjct: 369 NKISLERNEEE---------VGQTQEVLVEGEKDRGSGFIYGRNRGNKTVIFSGDPSLVG 419 Query: 708 RQTPAT 713 + P T Sbjct: 420 KVVPVT 425 >UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=C4Z0P5_EUBE2 Length = 446 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 87/248 (35%), Gaps = 57/248 (22%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 E R + I GC CS+C I GR ++SR + I+NE++ + T G V+ L Sbjct: 148 EHTRAYIKIQDGCNQFCSYCIIPYVRGR-VRSRKPEDIVNEVKTLAAT--GVKEVV--LT 202 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G + Y D + I L +++GIK+I + Sbjct: 203 GIHISSYGT-------------------------DLENISLIELIEAIHEIEGIKRIRLG 237 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPE-HT-----EEGPLSKM-MKPGMGSYD-- 544 S +PR I E + G KI P H + L M K Y Sbjct: 238 S--------LEPRIITEEFAKRIAGLEKICPHFHLSLQSGCDKTLKAMNRKYNTEEYYEG 289 Query: 545 --RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + +E+F+ + + I PG +ED + +L+K F + + Sbjct: 290 CVKLREVFENPA--------ITTDVIVGFPGETEEDFLETRKFLEKVHFYEMHIFKYSRR 341 Query: 603 PLANSTTM 610 + M Sbjct: 342 KGTVADKM 349 >UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RIMO_CARHZ Length = 438 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 58/288 (20%), Positives = 97/288 (33%), Gaps = 45/288 (15%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 R + E+ R+ + I GC C++C+I G+ SR D I+ EI+ G Sbjct: 131 KKPRAKSNEVYRY-IKIADGCDNRCTYCTIPAIRGKY-TSRPLDDILEEIKDTLKQ--GI 186 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 +I TA Y + + L R+ +K Sbjct: 187 KEIILVAQDTTA--YGIDLYGEF------------------------KLVELLRKIGSIK 220 Query: 486 GIKKILIASGVRYDIAVED---PRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMG 541 G VR D P I E+ + V Y+ + +H L KM + G Sbjct: 221 G------NFWVRLMYLYPDKITPELINEIKENPKVIKYVDVPLQHIHPEILKKMGRKGSS 274 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 + + K+ + + FI PG +E L ++KK +F +Y Sbjct: 275 --EEIISTLERLRKEI-PDITIRTTFIVGFPGETEEQFNYLLDFVKKFKFNRLGAFPYYR 331 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDP 649 + M G+ P + E + + + L+KAL+ P Sbjct: 332 EKGTPAAKM--KGQIPKKVKEQRYEKLMEVQQEISLNLNKALVGKKIP 377 >UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APT3_9BACE Length = 460 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 104/288 (36%), Gaps = 34/288 (11%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 E R + + GC CS+C I GR ++SR + + E+ + + G+ I L Sbjct: 142 EHTRAYIKVQDGCNQFCSYCIIPYTRGR-VRSRRPEDVTAEVRRLVEK--GYKEFI--LA 196 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G + Y + ++P E R + + + L ++G+K++ + Sbjct: 197 GIHLSSYGIDFEAPCDEAVDYRAA----------NMPGSRLLELIEAVCSVEGVKRLRLG 246 Query: 494 SGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFD 551 S ++ + ++K +A V + I+ + + L +M + Y+ +L Sbjct: 247 S---FEPRILTEAFVKRMAELEPVCPHFHISLQSGCDATLKRMNRRYTADEYEESCKLLR 303 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 Y A + I P DE+ +L++ F V + + M Sbjct: 304 KYFPNAAITTDV----IVGFPQETDEEFAITKEYLERIHFYEMHVFKYSRRKGTAADRM- 358 Query: 612 YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQAL 659 G+ P E V + L K + R + + I++ L Sbjct: 359 -DGQVP--------EPVKTARSAGLLELEKRMSREYRESALGSIQEVL 397 >UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Desulfuromonadales RepID=RIMO_PELPD Length = 450 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 94/288 (32%), Gaps = 56/288 (19%) Query: 371 PAYEMIRFS-VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVI 429 PA+ FS + I GC CS+C I + G +SR ++++ E E + +I Sbjct: 149 PAW----FSYLKIGEGCSNRCSYCIIPKLRGPY-RSRPLEALVAEAEQLASRGVKELNII 203 Query: 430 S-DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK 488 S D+ Y + +T R + + I L D GI Sbjct: 204 SQDI-----TRYGSDMEDGTTLETLLRR---------LVQIDGIQWIRLLYAYPD--GIS 247 Query: 489 KILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS-YDRFK 547 LIA + ++P+ K YL I +H + L M + Sbjct: 248 DALIA------LIRDEPKICK---------YLDIPLQHISDPVLKLMRRRSNEQQIRELL 292 Query: 548 ELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANS 607 L I PG ED +L ++++ RF V + + Sbjct: 293 AKLRREIPTLALRTSL----IVGFPGETMEDFTSLMQFVEQARFDRLGVFCYSREEGTPA 348 Query: 608 TTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLI 655 TM SE V K ++ R+L + R N LI Sbjct: 349 ATM----------PDQVSERV---KRERHRKLMRIQARLSFKRNRELI 383 >UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJG9_9BACT Length = 423 Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 88/234 (37%), Gaps = 46/234 (19%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V IM+GC CS+C + GR +SR + II+EI+ + D I+ LG N Sbjct: 135 VTIMKGCNNFCSYCIVPYVRGRE-KSREQSEIIDEIKYLADKGAR---EITLLG-QNVNS 189 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI-LIASGVRY 498 Y P + +P L + D++GIK+I + S Sbjct: 190 YGTALTDPVS----------FP--------------ELLDKVSDVEGIKRIRFVTS---- 221 Query: 499 DIAVEDPRYIKELATHHVGG-----YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 + EL G YL + + L KM + +YD +KE Sbjct: 222 ----HPKDFSNELIDVMRGNDKICEYLHLPLQSGSNAVLQKMNR--KYTYDHYKERVLR- 274 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANS 607 +K+ + L FI PG +ED + L++ R+ + N+ P + Sbjct: 275 AKEMIPDLALSSDFIVGFPGETEEDFQSTMKALEEIRYDMIYAFNYSTRPGTKA 328 >UniRef50_B8F9C5 Radical SAM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F9C5_DESAA Length = 471 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 69/319 (21%), Positives = 100/319 (31%), Gaps = 69/319 (21%) Query: 357 YKRVPHPAYGN--ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 Y + PH A+ PA RGC GC FCS+ G I+ R+ + E Sbjct: 190 YPKAPHGAFFRRFPVAPAL--------TSRGCSYGCGFCSVPALTGGKIRFRAPQLVAEE 241 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCR---RLSCVYPDICPHMDTNH 471 + A++ I D TAN A TCR P CP+ Sbjct: 242 LMALKTRFGVQEAQIID-DNFTAN-------KAHALNTCRALINSGVNLPWTCPN----- 288 Query: 472 EPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGG---YLKIAPEHTE 528 GVR + KEL G + + E Sbjct: 289 -----------------------GVRMENLD------KELIQAMKGAGCYSVSLGLESGS 319 Query: 529 EGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKK 588 L++M K S D E + +K AG E + +FI +P +DM + K Sbjct: 320 AKVLNRMKK--GLSLDHVGERVELLAK-AGLE--VNGFFILGYPEETRQDMKATLDFAKS 374 Query: 589 HRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV-FVPKGDKQ----RRLHKAL 643 F P P + + V +VP+G + R+ KA Sbjct: 375 LPLTRANFSLFTPLPGCPEWERLSADPAAMEGLTTTFSQVGYVPQGFSRSSLKRQQRKAF 434 Query: 644 L-RYHDPANWPLIRQALEA 661 L Y N + +L + Sbjct: 435 LGFYLQRRNAERLLASLRS 453 >UniRef50_B8GFG5 Radical SAM domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFG5_METPE Length = 489 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 75/408 (18%), Positives = 125/408 (30%), Gaps = 84/408 (20%) Query: 274 AKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDR 333 + E V++ E+ D V + ET G A + GDR Sbjct: 103 HVTFLPSETLAECRELNAVVIGEGEETVVDLVTSFSMTDPHWPETVRGIAYR--RNDGDR 160 Query: 334 YVWINPPAIPLSTEEMDSVFALPY-KRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF 392 + PA L +D ALP+ R P I + + RGC ++ Sbjct: 161 ERIVVTPARELIQN-LD---ALPFPARHLVPFNEYKLFDKDATIGYMITS-RGCTFASNY 215 Query: 393 CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQT 452 CS + G + ++RS ++++E+E + T I L Sbjct: 216 CSSSHLMGGMFRARSPKNVVDEVEELVSTY--HVDTIEFLD------------------- 254 Query: 453 CRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS----GVRYDIAVEDPRYI 508 + N I++ R +G+ +AS V D+ +E + Sbjct: 255 ------------DNFMLNRSRAIDIAHEIRS-RGLDISFVASSRVNAVNRDLLMELKKAG 301 Query: 509 KELATHHV-GGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 + V G L+ L M K E +K G ++ F Sbjct: 302 LSTIYYGVESGSLRT---------LKLMNK---RITLSMAEDAVRIAKDCGIS--VLTSF 347 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA-----------NSTTMY--YTG 614 I +PG EDM + + Q P P +T + YT Sbjct: 348 IIGYPGETYEDMNATIRFAIRLDPDYAQFTILTPYPGTPIFQELKKNNLLATEDWDRYTV 407 Query: 615 KNPLAKIG---YKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQAL 659 P+ + S + R+L +A LR++ + R L Sbjct: 408 LEPIIRYEAYGLTSRKI-------SRKLKEAYLRFYLRPGYLFRRSGL 448 >UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY00_ACIFD Length = 487 Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 109/365 (29%), Gaps = 45/365 (12%) Query: 359 RVPHPAYGNARIP-------AYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSI 411 R P P P + E R V I GC C+FC + G SR D+I Sbjct: 127 REPEPGSVGLDDPTPWGEAVSEEPWRAWVTIQVGCDNRCAFCIVPRVRGPE-ASRPFDAI 185 Query: 412 INEIEAIRDTVPGFTGVISDLG--GPTANMYML-------RCKSPRAEQTCRRLSCV--- 459 + E+ + G +S++ G N Y R + R S V Sbjct: 186 VAEVRELAA-----RG-VSEVTLLGQNVNSYGRDLVLAMRRAEDERERAQVASRSGVAFL 239 Query: 460 ---YPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHV 516 P + P +L R + GI+++ S D+ E + + E T V Sbjct: 240 GQGVPRVRPLFA-------DLVRAVGAVPGIRRVRFTSPHPKDMRTETFQAMAETPT--V 290 Query: 517 GGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRD 576 L + + L+ M + S DRF ++ + + I PG D Sbjct: 291 CESLHFPLQSGSDRILAAMHR--GYSADRFLAKL-AEARATIDDLAVSTDIIVGFPGETD 347 Query: 577 EDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQ 636 D + F L + P P + + +P V V + Sbjct: 348 ADFEATLEVAAEAAFDLAYTFIYSPRPGTEAAALVDRFVDPDVVHERFDRLVRVTERSAA 407 Query: 637 RRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRP 696 + R LI + +R+ LV P ++ R R Sbjct: 408 AAHRARVGR----DEEILIEGPSRKDPRTATARTRQHKLVHIPGLDARALGGRYGRARIV 463 Query: 697 ALTKH 701 H Sbjct: 464 DARAH 468 >UniRef50_C6M658 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M658_NEISI Length = 496 Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 70/354 (19%), Positives = 118/354 (33%), Gaps = 68/354 (19%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS-DLGGPTAN 438 V+IM GC CSFC + G SR + ++ EI + GV +L G N Sbjct: 205 VSIMEGCSKYCSFCVVPYTRGEEF-SRPLNDVLTEIANLAQQ-----GVKEINLLGQNVN 258 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI-LIASGVR 497 Y + L R ++ GI+++ S R Sbjct: 259 AYRGEMEDGEIC----------------------DFATLLRIVHEIPGIERMRFTTSHPR 296 Query: 498 --YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 D +E R + +L +H L + + + LS M K G + + +K + + Sbjct: 297 EFTDSIIECYRDLPKLVSH-----LHLPIQSGSDRVLSAM-KRGYTALE-YKSIIRKL-R 348 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + L FI PG + + +K F L V + P P + + Sbjct: 349 AIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANL----- 403 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 P +K RRL + +A A + +IG+ + CL Sbjct: 404 -----------PDDTPHAEKVRRL----------EALNEVIEAETARINQTMIGTVQRCL 442 Query: 676 VPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTP--ATAKKASSTQSRPVNA 727 V + ++ + + + N R TP + T S + +PV A Sbjct: 443 VEGISKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKPVEA 496 >UniRef50_A0LV11 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Acidothermus cellulolyticus 11B RepID=RIMO_ACIC1 Length = 475 Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 55/289 (19%), Positives = 86/289 (29%), Gaps = 71/289 (24%) Query: 326 LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG-NARIPAY--------EMI 376 + Q+ D V P P + D LP V P IP + + Sbjct: 105 IAQRLED--VLAGRPPAPHTPR--DRRTLLPLTPVDRPRAAAEVGIPGHLGGPRVLRHRL 160 Query: 377 RFS----VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT--------VPG 424 S + I GC C+FC+I G + SR I+ E + + D Sbjct: 161 DDSPVAPLKIASGCDRRCTFCAIPSFRGAFV-SRPPADILREAQWLADHGAREIVLVSEN 219 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 T DLG P A L + Sbjct: 220 STSYGKDLGDPFA------------------------------------LEKLLAAFGGV 243 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGM-GS 542 G+ ++ + A P I +AT HV Y ++ +H L +M + G Sbjct: 244 DGLVRVRVTY---LQPAEVRPALIDVIATAPHVAPYFDLSFQHASPRVLRRMRRFGGSEE 300 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 + + +A + I PG +ED+ L +L+ R Sbjct: 301 FLNLLAEIRRRNPRAAVRSNV----IVGFPGETEEDVAELGEFLRAARL 345 >UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIQ8_9FIRM Length = 444 Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 92/251 (36%), Gaps = 47/251 (18%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE-AIRDT 421 P + A+ I M GC C++C + GR +SR + I++E+E A+++ Sbjct: 146 PVARAGSLSAWVPI------MYGCNNFCTYCIVPYVRGRE-RSRLPEDIVHEVEEAVKNG 198 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHE--PTINLYR 479 T L G N Y +H+ +L + Sbjct: 199 YEEVT-----LLGQNVNSYG---------------------------KDHKLADFADLLK 226 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 + GI+++ + D++ + I++ H+ ++ + ++ L M + Sbjct: 227 MVDKVPGIRRVRFMTSHPKDLSDKVIAAIRD--GEHLCEHIHLPVQYGSNRILKAMNR-- 282 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + + + +++L + A + L I PG DED + +L++ R+ + Sbjct: 283 VYTVESYRDLVRRI-RAAIPDVSLTTDLIVGFPGETDEDFQQMLDFLREIRYDSAYTFIY 341 Query: 600 YPSPLANSTTM 610 + TM Sbjct: 342 SKRSGTPAATM 352 >UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=174 Tax=Actinobacteria (class) RepID=MIAB_MYCA1 Length = 715 Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 111/358 (31%), Gaps = 75/358 (20%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P+ + A+ I SV GC C+FC + G+ + RS D I+ E+ ++ Sbjct: 166 PSARESAYAAWVSI--SV----GCNNSCTFCIVPSLRGKEV-DRSPDDILAEVRSLVAD- 217 Query: 423 PGFTGVIS-DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 GV+ L G N Y + P + + L R Sbjct: 218 ----GVLEVTLLGQNVNAYGVSFAD------------------PALPRDRGAFARLLRAC 255 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPE-HT-----EEGPLSKM 535 ++ G++++ S + ++ + + P H + L M Sbjct: 256 GEIDGLERVRFTS-------PHPAEFTDDVIEA-MAQTPNVCPALHMPLQSGSDRVLRAM 307 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 + +R+ + D + A + I PG +ED +++ RF Sbjct: 308 RRSYRA--ERYLGIIDRV-RAAMPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAF 364 Query: 596 VQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLI 655 + P + + + +PK Q R + + + Sbjct: 365 TFQYSKRPGTPAAEL-------------DGQ---IPKAVVQERYERLV----------EL 398 Query: 656 RQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPAT 713 ++++ G + L+G + LV + R + R H A R P Sbjct: 399 QESISLQGNQALVGQTVELLVATGEGRKDSATARMSGRARDGRLVHFA-ADDRVRPGD 455 >UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Chloroflexi (class) RepID=MIAB_ROSS1 Length = 476 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 133/417 (31%), Gaps = 82/417 (19%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHAS 311 Y + C N + + + A P +P + ++++L S + ++ + S Sbjct: 27 RYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEERILGKLS 86 Query: 312 RILHHETNPGCARALMQKH----GDRYVWINPPAIPL-----STEEMDSVFALPYKRVPH 362 + + + ++ G++ ++ + +P+ S +D V AL P+ Sbjct: 87 EVQRLKRKHPDTKVVLWGCMVGPGNQSIFQSR--LPMVDHFVSPSAVDEVLAL----APN 140 Query: 363 PAYGNARIPAYEMIRFS-------VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEI 415 P Y PA + R+ V I GC CSFC I GR +SR D I+ E Sbjct: 141 PIYQLEE-PALPVARWDHPPVSVHVPIQYGCNMSCSFCVIPLRRGRE-RSRPLDEIVEEC 198 Query: 416 EAIRDTVPG---FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHE 472 I G I D G R Sbjct: 199 RRIVARGAKEITLLGQIVDSWG---------------HDLPGRP---------------- 227 Query: 473 PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP------EH 526 +L R D+ G+ +R P ++ + V + P + Sbjct: 228 DLADLLRAVHDIPGL--------LRLRFLTSHPAWMTDRLIAAVAELPRCMPDINLPVQA 279 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 ++ L M + + R+++L + A + L I HPG E L Sbjct: 280 GDDALLKIMRR--GYTVQRYRDLIAKI-RDAIPDVSLTTDVIVGHPGETRERFEGTKRLL 336 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 + RF + F P + M +P + + + + + RL + + Sbjct: 337 EDIRFDKVHIAAFSSRPGTRAADM---ELDPTLAVPEGEKQL---RRIELERLQEQI 387 >UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bacterium Ellin514 RepID=B9XHC1_9BACT Length = 556 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 57/286 (19%), Positives = 88/286 (30%), Gaps = 50/286 (17%) Query: 340 PAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVN--------IMRGCFGGCS 391 PA+PL MD P Y IP +E RF + I GC CS Sbjct: 185 PAVPL----MDV--------NARPVY----IPDFETPRFRLTPKHFAYVKIAEGCNHPCS 228 Query: 392 FCSITEHEGRIIQSRSEDSIINEIEA-IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE 450 FC I G +SR + I+ E + I D V + D + Y L + + Sbjct: 229 FCIIPRMRGSH-RSRVQADIVREAKQLIADGVKELNLISQD-----STYYGLDLRPNHSR 282 Query: 451 QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKE 510 + + + L R + G I + + + E Sbjct: 283 NIASPEK--FNSAAKSLPADATTLCTLLRELNAIPGDFWIRL-------LYTHPAHWTDE 333 Query: 511 LAT-----HHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI- 564 L V Y+ + +H E L +M + Y L +AG I Sbjct: 334 LIQTIAKCKKVARYVDMPLQHIHENMLERMRRETSEQY--IVNLIQRI--RAGIPGIAIR 389 Query: 565 PYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 FI PG + L +++ +F V + + M Sbjct: 390 TTFIVGFPGETETYFKTLLNFIRDTKFERLGVFTYSKEDGTRAGNM 435 >UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotransferase n=3 Tax=Cyanobacteria RepID=UPI0001C33830 Length = 439 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 50/252 (19%), Positives = 86/252 (34%), Gaps = 46/252 (18%) Query: 366 GNARIPAYEMIRFSVNIMR---GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 + +P Y V +R GC C+FC I G +SR+ +SI+ E + + + Sbjct: 131 ADETVPRYRTTNEGVAYLRIAEGCNYRCTFCIIPHLRGNQ-RSRTIESIVAEAQQLANEG 189 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 ++S + T N Y L +Y + L + Sbjct: 190 VQEIIIVSQI---TTN-YGLD---------------LYGKV---------KLAELLQALG 221 Query: 483 DL--KGIK-KILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 + I+ +G+ ++ + +KE+ V YL + +H+ L M +P Sbjct: 222 KVNVPWIRVHYAYPTGLTAEVL----KAVKEVPN--VIPYLDLPLQHSHPKILKAMNRPW 275 Query: 540 MGSY-DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQN 598 + D + FI PG DE +L ++K+H F V Sbjct: 276 KEAINDEIIKSIRASIPDVVLRTT----FIVGFPGETDEYFEHLVKFIKRHHFDHVGVFV 331 Query: 599 FYPSPLANSTTM 610 F P S M Sbjct: 332 FSPEEGTPSYKM 343 >UniRef50_Q1PVH8 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVH8_9BACT Length = 455 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 83/249 (33%), Gaps = 58/249 (23%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 HP Y SV RGC C FCS+++H G+ + R I+NE+E I+ Sbjct: 152 HPDY----------FWHSVQTSRGCPFNCYFCSVSKHLGKAYRQRKPQEILNELEEIKGK 201 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 F + D N+ + + + L++ Sbjct: 202 YITF---VDD------NLIG------------------------YTTESKARAMELFKGM 228 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP--- 538 +K+ ++ I D + ELA Y+ I E +G L M K Sbjct: 229 IQ----RKLHKRWWMQTSINAADDERVIELAAQSGCLYVFIGFETISQGMLKDMKKGINL 284 Query: 539 --GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 G+ +Y + + F Y G ++ FI + LA +L + + Q+ Sbjct: 285 KIGVENYKKVVDRFHKYG--IG----VLGAFIIGNDNESSLYYKKLADFLVQSGIDIVQI 338 Query: 597 QNFYPSPLA 605 P P Sbjct: 339 TLLTPLPGT 347 >UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP71_9BACT Length = 461 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 58/323 (17%), Positives = 111/323 (34%), Gaps = 80/323 (24%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 ++ V+IM+GC C+FC + + GR ++R I++E+ + ++ I+ LG Sbjct: 160 QVQAFVSIMQGCNMNCAFCIVPKTRGRE-RARPIQEIVDEVIGLAESGVK---EITLLG- 214 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 RR +P + P + L + ++ GI++I S Sbjct: 215 ------------QIVTSYGRRD---FPVV-----NGKSPFVQLLEKIEEIPGIERIRFTS 254 Query: 495 ----GVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 G + D+ K L + H+ L M +P +R++E+ Sbjct: 255 PHPRGFKQDLVEAYRDLSK-LCEYVHLPLQAG------CNKTLRAMNRPYTK--ERYREI 305 Query: 550 FDTYSKQAGKEQYLIP--YF----ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 D+ ++P YF I PG + D A F + + + Sbjct: 306 VDSLRA-------MVPSMYFSTDIIVGFPGETEADFNETAAMFDDIAFDMAYIFKYSIRT 358 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 + TM +P+ +K+RR L H ++ Sbjct: 359 GTPAETM----------------PDQIPQEEKERRNQVLLDLLHK-----------HSLA 391 Query: 664 K-KHLIGSRRDCLVPAPTIEEMR 685 + + L+G+ LV P + + Sbjct: 392 RNEGLVGTTEQVLVEGPAKKGDK 414 >UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2I9_SPHTD Length = 460 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 81/262 (30%), Gaps = 59/262 (22%) Query: 358 KRVPH---PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 +PH P + + A+ I + GC CS+C + GR +SR +I E Sbjct: 143 AELPHFYQPDAAGSDVTAFVPIIY------GCNFVCSYCIVPYRRGRE-RSRPMAEVIAE 195 Query: 415 IEAIRDT-VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEP 473 +E + + V T L G T N Y Sbjct: 196 VERLAERGVKEVT-----LLGQTVNAYGHDLPGSP------------------------D 226 Query: 474 TINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTE----- 528 +L ++ GI++ +R+ P+Y+ + V L A EH Sbjct: 227 LADLLTAVNEIPGIER------IRF--LTSHPKYMSDRIVQAVA-TLPKACEHINLPVQA 277 Query: 529 --EGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 + L +M + + R + + + I I PG +E L Sbjct: 278 GDDEVLRRMRRTYTVDFYRERIAYIRETIPGVTVSTDI---IVGFPGETEEQFQRTLDLL 334 Query: 587 KKHRFRLDQVQNFYPSPLANST 608 + R V + P P S Sbjct: 335 AELRLDKVHVAMYSPRPRTLSA 356 >UniRef50_D2AXY5 RNA modification enzyme, MiaB-family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AXY5_STRRD Length = 469 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 64/228 (28%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE--------IEAIRDTVPGFTGVIS 430 S+ + GC C+FC+I G + SRS + +++E ++ + T Sbjct: 175 SLKLASGCDRRCTFCAIPAFRGAYV-SRSPEELVSEAAWLAGQGVKELVLVSENSTSYGK 233 Query: 431 DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI 490 DLG + L +GI+++ Sbjct: 234 DLG------------------------------------DLRALEKLLPSLAATEGIERV 257 Query: 491 LIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP------EHTEEGPLSKMMKPGM-GSY 543 ++ P ++ + +AP +H L +M + G + Sbjct: 258 RVSY--------LQPAELRPGLLEMIASTESVAPYFDLSFQHASGSVLRRMRRFGDPRRF 309 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 E + +AG FI PG +E+ L +L++ R Sbjct: 310 LDLLESVRATAPEAGVRSN----FIVGFPGETEEEFAELTAFLQEARL 353 >UniRef50_A7H335 MiaB-like tRNA modifying enzyme n=16 Tax=Campylobacterales RepID=A7H335_CAMJD Length = 416 Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 49/203 (24%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRS--EDSIINEIEAIRDTVPG---FTGVISDLGG 434 V I GC CS+C I G+ SRS E +++ ++E + TG ++G Sbjct: 137 VKIQEGCDFACSYCIIPSVRGK---SRSVDEKALLKQVEILGANGYSEIVLTGT--NIGS 191 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 Y L+ N L ++ + GIK+I + S Sbjct: 192 -----YGLK--------------------------NGTTLGKLLQKMGQISGIKRIRLGS 220 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 + A D +++ L + +L IA +HT E L M + D +LF+T Sbjct: 221 ---LEPAQLDESFLEILDETWLERHLHIALQHTSEKMLRIMRRRSHTDND--LKLFNTI- 274 Query: 555 KQAGKEQYLIPYFISAHPGTRDE 577 A K L FI AHPG +E Sbjct: 275 --ASKGYALGTDFIVAHPGESEE 295 >UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD6_9DELT Length = 463 Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 65/316 (20%), Positives = 103/316 (32%), Gaps = 72/316 (22%) Query: 338 NPPAIPLSTEEMDSVFA-LPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSIT 396 P A L +D + LP +P PA+ R + I GC CS+C I Sbjct: 131 APAADSLRYRPVDDLQRFLPNATLP----RRLTTPAH---RAYLKITEGCGNRCSYCMIP 183 Query: 397 EHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRR 455 G ++SR I++E A+ V T V DL TA Y L Sbjct: 184 AIRG-PLRSRRPADILHEARALAAAGVKELTLVAQDL---TA--YGLD------------ 225 Query: 456 LSCVYPDICPHMDTNHEPTINLYRRA-RDLKGIKKILIASGVRYDIAVEDPRYIKELATH 514 + +L + R+L + I + P + + Sbjct: 226 -----------LGPGGPRLPDLLAQLHRELPAAQVPWIR------LLYLYPSRVNDELLE 268 Query: 515 HVGGYLKIAP------EHTEEGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 V +I P +H + L M +P G + +A F Sbjct: 269 LVAANPRILPYFDLPFQHVADPVLKAMNRPYGEALVRELVDRVRRLVPRAVIRST----F 324 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSED 627 + PG R+ED+ LA +L+ RL+ V F Y + A + Sbjct: 325 MVGFPGEREEDVEALAAFLRD--CRLEHVGMFT-----------YCNEEGSAAATLPGQ- 370 Query: 628 VFVPKGDKQRRLHKAL 643 VP+ K++R + + Sbjct: 371 --VPEELKEQRFQRLM 384 >UniRef50_Q9WZT7 Putative methylthiotransferase TM_0830 n=6 Tax=Thermotogaceae RepID=Y830_THEMA Length = 434 Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 39/258 (15%), Positives = 78/258 (30%), Gaps = 55/258 (21%) Query: 367 NARIPAYEMIRFS--------VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 P YE ++ S + + GC C++C+I G I+S+ + E + Sbjct: 120 EPGRPVYEKVKGSFEDRTRSYIKVEDGCDNTCTYCAIRLARGTRIRSKPLEIFKEEFAEM 179 Query: 419 RDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLY 478 + G+ ++ + G Y S A L Sbjct: 180 V--MKGYKEIV--ITGVNLGKYGKDMGSSLA--------------------------ELL 209 Query: 479 RRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGG-----YLKIAPEHTEEGPLS 533 + + G ++ ++S + E+ +L I+ + + L Sbjct: 210 KVIEKVPGDYRVRLSS-------INVEDVNDEIVKAFKRNPRLCPHLHISVQSGSDDVLK 262 Query: 534 KM-MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFR 592 +M K + + R + + + I PG D D ++K F Sbjct: 263 RMGRKYKISDFMRVVDKLRSIDPDFS----ITTDIIVGFPGETDADFQRTLELVEKVEFS 318 Query: 593 LDQVQNFYPSPLANSTTM 610 + F P P ++ M Sbjct: 319 RVHIFRFSPRPGTPASRM 336 >UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 n=2 Tax=environmental samples RepID=B3TCC0_9ARCH Length = 472 Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 112/344 (32%), Gaps = 50/344 (14%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 VNI++GC C+FC + GR +SR + + EI + + G +I L G N Sbjct: 174 VNIIKGCDKFCTFCVVPFTRGRE-KSREPEELFEEIRHLVNH--GAKEII--LLGQNVNS 228 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y R P L ++ G++++ + D Sbjct: 229 YGKRGLKKPV-----------------------PFHELLYGIAEIPGVQRLRFTTSHPND 265 Query: 500 IAVEDPRYIKEL--ATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 + R ++L +H+ +L + + L M + + + + +L + Sbjct: 266 FTRDTIRAYRDLDILMNHL--HLPV--QSGNNQMLKAMRRD--HTIEEYLDLLAELKSEV 319 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 L I PG DE + +++ + + + P P + + + P Sbjct: 320 PGIS-LSTDIIVGFPGETDEAFGDTLKIMEEVGYSSSFMFAYSPRPGTPANEL--SDSVP 376 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 + +++ + + ++ ++ + N ++ + G+ G P Sbjct: 377 EETKKRRLQEIIALQSRQTKQQGQSFI----GKNVEVLIE-----GRSSKPGYVYKGRNP 427 Query: 678 A--PTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASS 719 + E Q T L K + T + + A Sbjct: 428 QYWNVNIQGGEGILQAGETVTVLVKQVSGHSLNGTTSHRRAAGG 471 >UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=20 Tax=cellular organisms RepID=MIAB_PROM3 Length = 480 Score = 55.4 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 89/239 (37%), Gaps = 45/239 (18%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 VN++ GC C++C + G+ QSRS ++I EIE + GF I+ LG Sbjct: 174 VNVIYGCNERCTYCVVPSVRGKE-QSRSPEAIRLEIEGLAAR--GFR-EITLLG------ 223 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 + R L + P+ +L D++GI++ +R+ Sbjct: 224 -------QNIDAYGRDLPGITPE-----GRRQNTLTDLLHHIHDVEGIER------IRF- 264 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTE-------EGPLSKMMKPGMGSYDRFKELFDT 552 A PRY E K+ EH L M + + +R++ + + Sbjct: 265 -ATSHPRYFTERLIEACFDLPKVC-EHFHIPFQSGDNDVLKAMAR--GYTVERYRRIVNR 320 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQN--FYPSPLANSTT 609 ++ + + I A PG D N +++ F DQV + P P + T Sbjct: 321 I-RELMPDAAISTDVIVAFPGETDAQFQNTLNLVEEVGF--DQVNTAAYSPRPNTPAAT 376 >UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C4FYU3_ABIDE Length = 515 Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 82/245 (33%), Gaps = 50/245 (20%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS-DLGG 434 + SVNI GC C++C + GR +SR I+ E++ + D GVI L G Sbjct: 216 FKASVNITYGCDNFCTYCIVPYVRGRE-RSRRPGDIVKEVKCLADA-----GVIEIMLLG 269 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y + + E NL R ++GIK+ Sbjct: 270 QNVNSYGKGLEGEKGEPV--------------------TFANLLRMVEKVEGIKR----- 304 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIA-PEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 +R+ + + EL IA E + R + Sbjct: 305 -IRF-MTPHPKDFSDELIE-------VIADSEKICKHIHLPFQAGSNNVLRRMNRRYTKE 355 Query: 554 S--KQAGKEQYLIPYF------ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 S + AGK + IP I PG +ED + +K+ R++ + + Sbjct: 356 SYLELAGKIKTRIPDIALTTDIIVGFPGETEEDFEDTLDVVKEVRYQSAYMFEYSKRTGT 415 Query: 606 NSTTM 610 + TM Sbjct: 416 PAATM 420 >UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7K6_GEMAT Length = 473 Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 48/293 (16%), Positives = 100/293 (34%), Gaps = 68/293 (23%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTANMYMLR 443 GC GC+FC+I G+ +S + D ++ E + + V DL Sbjct: 147 GCDHGCAFCAIPLMRGKH-RSFALDELVREAQLLEVQGAREINLVAQDL---------AH 196 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHE--PTINLYRRARDLKGIKKILIAS-GVRYDI 500 R + H + R + I+ + + S G+ Sbjct: 197 YGRDRRDG-------------------HGLPELLEALVRETSIPWIRNMYLYSTGI---- 233 Query: 501 AVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 PR ++ +A H + YL +H + L++M +P E T ++ + Sbjct: 234 ---TPRLLEVIAAHPRIVRYLDTPMQHGSDAVLTRMRRP---------ERQKTIRERLAR 281 Query: 560 EQYLIPYF------ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + ++P I PG ++D L +L++ +F V + P + M Sbjct: 282 YRDIVPDLAVRTSVIVGFPGETEDDFNILCDFLEEMQFDRVGVFTYSPQEGTRAHAM--- 338 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 ++ + + ++ L +A+ + L R+A + ++ Sbjct: 339 -------EDDVADSIKQERKERIEELQRAITA--ERYERFLGREARVLVERRG 382 >UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR79_9FIRM Length = 478 Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 50/247 (20%), Positives = 86/247 (34%), Gaps = 44/247 (17%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 +RI A+ I M+GC C++C + GR SR+ D I EIE + G+ Sbjct: 181 RKSRIFAWVPI------MQGCNKFCTYCIVPYVRGRE-TSRTIDDICREIEKLA--REGY 231 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 I+ LG N Y L + +L + Sbjct: 232 K-EITLLG-QNVNSYGLDFH------------------------DGTDFGSLIHAIDKID 265 Query: 486 GIKKILIASGVRYDIA--VEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSY 543 GIK++ + D+ + D H+ +L + +H L +M + + Sbjct: 266 GIKRVRYMTSHPKDMTFGMVDAMAASPKVVRHM--HLPV--QHGANEILRRMNR--GYTI 319 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 +RFKEL Y ++ + I+ PG ++ LK+ +F + P Sbjct: 320 ERFKELL-KYVREKMPGITVTTDLITGFPGETEDMHEETLTLLKEMKFDSAYTFIYSPRR 378 Query: 604 LANSTTM 610 + M Sbjct: 379 GTPAARM 385 >UniRef50_A5G7K0 Radical SAM domain protein n=2 Tax=Geobacter RepID=A5G7K0_GEOUR Length = 451 Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 58/287 (20%), Positives = 93/287 (32%), Gaps = 64/287 (22%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV--ISDLGGPTA 437 V RGC GGCSFCS + GR +SRS +S++ E++ + GF V + D Sbjct: 187 VVTSRGCPGGCSFCSSSNFFGRGWRSRSPESVLAELDEVYTRY-GFRAVAFVDD------ 239 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 + + E I + R+ K S R Sbjct: 240 ----------------------------NFSLSPERVIGIAEGIRERGFDLKWWNFS--R 269 Query: 498 YDIAVEDPRYIKELATHHVGG--YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 D V +P+ ++ ++ G + + E L + K G G + Sbjct: 270 VDTIVRNPQMVRAMSA---AGAKTIFLGIESAGAEALQMLGKKGQGDE---TAAAVKLLQ 323 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + G E + +I H +D+ K + Q P P T +Y Sbjct: 324 ENGIE--VFGSYILGHLNESRKDIERTIDLAVKLNTNVAQFSILTPYPG---TALY---- 374 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 E +FV + LH L+ H N L++ L Sbjct: 375 ------EEVKERIFVKRWKFYDALH--LVFRHPRINRHLLQFLLIKA 413 >UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO n=65 Tax=Bacteria RepID=RIMO_CLOB8 Length = 465 Score = 55.0 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 77/227 (33%), Gaps = 48/227 (21%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + I GC C++C I + G+ +SR ++IINE + ++ G +I L + Sbjct: 170 IRIAEGCNNFCTYCIIPKIRGKF-RSRKMENIINEARDLSES--GVKEII--LIAQDTTL 224 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y +Y ++ L + ++GI+ I + Sbjct: 225 YGSD---------------IYGK--KNLHV-------LLKELSKIEGIEWIRV------- 253 Query: 500 IAVEDPRYIKEL-----ATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTY 553 + EL V YL I +H + L M K ++ Sbjct: 254 LYCYPEEIYDELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSKKDIINKIQILRER 313 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + FI P DED + +LK+ ++L++V F Sbjct: 314 VPEIVIRTT----FIVGFPNETDEDFNEIIDFLKE--YKLEKVGAFT 354 >UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ61_9FIRM Length = 455 Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 74/239 (30%), Gaps = 50/239 (20%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V I GC C+FC+I G +SR + I +E+ + + Sbjct: 148 VKIAEGCNNRCAFCAIPYIRGDY-RSRRIEDICDEVRHLTEN------------------ 188 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 +R A+ + +Y L R + ++ + Sbjct: 189 -GVREVVLIAQDSTEYGRDLYGAP---------KLSELLREIVKVPKLQWVRT------- 231 Query: 500 IAVEDPRYIKELATHHVGGYLKIA-----P-EHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 P+Y + + KI P +H + L M +P + + L Sbjct: 232 -LYSYPKYFSDELIETIASEPKICKYVDLPLQHAHDAVLRSMRRPDTQ--EEMRALIKKL 288 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS--PLANSTTM 610 ++ + FI PG D L ++++ RLD+V F S + M Sbjct: 289 RERIPGV-TIRSTFIVGFPGETDAQYHTLRNFIEEM--RLDKVGVFTYSREEGTPAYDM 344 >UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC80_9ACTN Length = 449 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 73/236 (30%), Gaps = 35/236 (14%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V I GC CSFC I GR SR+ +SII+E+ + I +G T + Sbjct: 146 VKISDGCNRFCSFCMIPYIRGRY-HSRNSESIISEVRDLVAGGVR---EIVLIGQDTG-I 200 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 + R L R + + + Sbjct: 201 WGTDFADEDVADGSPR-----------------NLAQLLRAVAEAVRPHNVWVRV----- 238 Query: 500 IAVEDPRYIKELA-----THHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 + ++ EL T V Y+ I +H + L M + G ++LF Sbjct: 239 LYLQPEGMTDELIDTIRDTPEVLPYIDIPVQHCDARILKAMRRSGSR--QELEDLFRDLR 296 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 ++ + + P D++ +L ++ F V + + + M Sbjct: 297 ERIPGI-VIRSTAMVGFPTETDDEFRDLIDFMDTVGFDYTSVFAYSREEGSLAAKM 351 >UniRef50_A8ZVQ2 Radical SAM domain protein n=4 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVQ2_DESOH Length = 524 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 93/275 (33%), Gaps = 58/275 (21%) Query: 343 PLST--EEMDSVFALPY-KRV--PHPAYGNARIPA---YEMIR-FSVNIMRGCFGGCSFC 393 P +T E++D+ LP+ R P Y A++P + +R + RGC C FC Sbjct: 183 PRTTWIEDLDT---LPFPARDLLPMETYFEAKVPMALHWRKVRNTPIVSSRGCPFKCPFC 239 Query: 394 SITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTC 453 S H G+ + RS ++++ EI ++ I +L N+ R ++ Q Sbjct: 240 SSWRHWGQRFRKRSAENVLAEITHLKSRY-----NIQELKWQDDNLTADRNRAKAIFQGM 294 Query: 454 RRLSCVYPDICPH---MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKE 510 V P P+ + T ++L +++ + + + SG DP + Sbjct: 295 IDRGLVMPWNTPNGIALWTLDGEMLDLMKKSGCFEIT--LAVESG--------DPETFRR 344 Query: 511 LATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISA 570 L + K +++ + + YFI Sbjct: 345 FVKK--------------PFTLDQAAK------------VARMARE--RRITTVAYFILG 376 Query: 571 HPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 PG + + + + F P P + Sbjct: 377 FPGETVRQVKSSIRFGLRMGVDYLVPFIFNPLPGS 411 >UniRef50_C2KX45 2-methylthioadenine synthase n=2 Tax=Lachnospiraceae RepID=C2KX45_9FIRM Length = 478 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 108/312 (34%), Gaps = 49/312 (15%) Query: 340 PAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHE 399 P P S + + + P + A+ ++ GC C++C I Sbjct: 129 PMEPFSPVREEGEYENLFLSKP-----KDKSRAFVKVQD------GCNQFCAYCIIPYVR 177 Query: 400 GRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCV 459 GR I+SR E+ + EI + GF V+ L G + Y L ++ E R+ Sbjct: 178 GR-IRSRKEEDCLEEIRHLAK--EGFQEVV--LTGIHLSSYGLDFENLSYEYASRKAE-- 230 Query: 460 YPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS------GVRYDIAVEDPRYIKELAT 513 E ++L + GI++I + S R+ +++ ++ + Sbjct: 231 ----------TGEALLHLISEVGKIPGIQRIRLGSLEPRIITERFLAGLKE---VEAICP 277 Query: 514 HHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHP 572 H +L + + E L +M + + + E A + I P Sbjct: 278 HF---HLSL--QSGAEKTLKEMNRHYTKEDFKKAVEDIRRVYPMAAITTDV----IVGFP 328 Query: 573 GTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPK 632 G R+ED +LK+ F V F + M + P +S+++ Sbjct: 329 GEREEDFQESLAYLKEISFYDLHVFKFSRRKGTKADEM--KEQIPDNIKTARSKELLALA 386 Query: 633 GDKQRRLHKALL 644 + ++ + L Sbjct: 387 LEDSKKFREKFL 398 >UniRef50_A8TGG3 Radical SAM domain protein n=1 Tax=Methanococcus voltae A3 RepID=A8TGG3_METVO Length = 490 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 80/226 (35%), Gaps = 36/226 (15%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + RGC G C+FC + E GR I+S+ + I+ E++ ++ IS G T ++ Sbjct: 209 IETHRGCLGNCTFCQVPEFFGRDIRSKPLELILKEVKNLKKHGVK-RIAIS---GGTGSL 264 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y ++ S N I + + + G K + + +R D Sbjct: 265 YNF-----------KKSS------------NRNLFIEMIEKVSSMVGSKNLSVPD-MRVD 300 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 D I ++ G++ E LS M K ++ +K G Sbjct: 301 YVDSD---ILTAVRNNTVGWVFYGIESGSNKLLSDMKKGTNP--EKNLNAI-KLAKDCGV 354 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 + + FI +P R+ D + +L V + P P Sbjct: 355 K--VGGSFIVGYPTEREVDYLMTKDFLVDAELDDVFVSSAEPIPKT 398 >UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Treponema denticola RepID=RIMO_TREDE Length = 467 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 79/225 (35%), Gaps = 45/225 (20%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA-IRDTVPGFTGVISDLGGPTAN 438 + I GC CSFC+I GR ++SR I +EI+ ++ + F + DL Sbjct: 147 IKITEGCDNFCSFCAIPIIRGR-LRSRPIKDICDEIKTFLKKSFYEFNLIGQDLAA---- 201 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y K +E R +C L + +KG KI + + Sbjct: 202 -YQTG-KDDLSEDELHRENC-------------SGLALLLKSISKIKGNFKIRLLY-IHP 245 Query: 499 D--------IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG-----MGSYDR 545 D I D R++ G KI + M + G + Sbjct: 246 DHFPLDILPIMTADKRFLPYFDIPFQSGAQKI---------IRAMNRNGAAEVYLDIIKN 296 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHR 590 +E F+ + G+ Q + F+ PG DED +LK+ R Sbjct: 297 IREAFEKTNSPYGEPQ-IRTTFLVGFPGETDEDFNETIKFLKELR 340 >UniRef50_B9KG42 MiaB-like tRNA modifying enzyme n=15 Tax=Epsilonproteobacteria RepID=B9KG42_CAMLR Length = 418 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 55/244 (22%), Positives = 87/244 (35%), Gaps = 65/244 (26%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDS--IINEIEAIRDTVPG---FTGVISDLGG 434 V I GC CS+C I G+ SRS S II +I+ + TG ++G Sbjct: 137 VKIQEGCDFACSYCIIPSVRGK---SRSIPSDEIIKQIKLLAQNGYSEVVLTGT--NIGS 191 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 Y L+ + L + + GIK++ + S Sbjct: 192 -----YGLK--------------------------DKTTLGKLLQEIGKINGIKRVRLGS 220 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 + A D + + L + +L IA +HT E L M + D LF+ S Sbjct: 221 ---LEPAQIDESFKEILDEPWLERHLHIALQHTHEKMLRIMRRRSHTQND--LALFNELS 275 Query: 555 KQ---AGKEQYLIPYFISAHPGTR---DEDMVNLALWLKKHRFRLDQVQNFYPSP--LAN 606 ++ G + FI AHPG ++ + F+L + F SP + Sbjct: 276 QKGFALGTD------FIVAHPGESELIWQEALE-----NFKHFKLTHIHAFIFSPRDGTH 324 Query: 607 STTM 610 S +M Sbjct: 325 SASM 328 >UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RIMO_MOOTA Length = 432 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 88/265 (33%), Gaps = 58/265 (21%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTANMYMLR 443 GC C++C+I +G +SR + ++ E ++ + V D TA Y L Sbjct: 150 GCNNRCTYCTIPSIKGPY-RSRPLEKVVAEAVSLAARGIKELVLVAQDT---TA--YGLD 203 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 C L RR ++GI+ + + Y Sbjct: 204 CYGEY------------------------RLPELLRRLARIEGIEWVR----LLYAYPTR 235 Query: 504 -DPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSY-DRFKELFDTYSKQAGKE 560 P I+ +AT V YL + +H EG L +M +PG G+ R E + Sbjct: 236 ITPELIEVMATEPGVVPYLDLPLQHASEGVLRRMGRPGTGAAGLRAIESLRRAIPEITIR 295 Query: 561 QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAK 620 FI PG +ED L +L R F P + ++ Sbjct: 296 ST----FIVGFPGEEEEDFQILLDFLTDARLDWVGAFKFSPEEGTIAASL---------- 341 Query: 621 IGYKSEDVFVPKGDKQRRLHKALLR 645 VP+ K+ R + +L Sbjct: 342 ------PGQVPEEVKEERYQRLMLH 360 >UniRef50_A5UK62 Anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase, Elongator protein 3/MiaB/NifB family n=2 Tax=Methanobrevibacter smithii RepID=A5UK62_METS3 Length = 474 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 55/115 (47%), Gaps = 12/115 (10%) Query: 312 RILHHETNPGCARALM-QKHGDRYVWINPPAIPLSTEEMDSVFALPY---KRVPHPAYGN 367 + L ++++ + ++ + + + +NP A + +++D LP+ +P Y Sbjct: 133 QALENQSSLHDVKGIVFEDKNSKEIVVNPEAPLI--QDLD---ELPFPALNLLPMKKYRL 187 Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 + + ++ RGC CSFCS G+ I+ RS ++I++EIE ++ Sbjct: 188 LDM---DTHMTTMITTRGCPMQCSFCSSAAMHGKKIRERSVENIVDEIEYLKTNY 239 >UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Deltaproteobacteria RepID=RIMO_DESPS Length = 443 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 74/233 (31%), Gaps = 54/233 (23%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT--------VPGFTG 427 R V I GC CS+C I G ++SRS ++ E++A+ + T Sbjct: 144 FRAWVKITEGCDNRCSYCMIPSIRG-PLRSRSVADVLEEVQAMVASGVQEISLIAQDLTA 202 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 DLG + +L+ + RL +YP E L + I Sbjct: 203 YGDDLGDDVNLLVLLKELLAKTSVPWIRLLYLYPS---------ELLDELLQLMAANPRI 253 Query: 488 KKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRF 546 K YL I +H + L M +P G + F Sbjct: 254 VK-----------------------------YLDIPIQHVNDRVLHLMNRPYGRADLEEF 284 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + + F+ PG +E+ + +L+ +LD V F Sbjct: 285 VDKARAHMPDIALRTT----FLVGFPGETEEEYAEIGEFLRVR--KLDHVGVF 331 >UniRef50_A9KIR0 Radical SAM domain protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KIR0_CLOPH Length = 461 Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD 420 IPA S++ RGC G C FC+ + G + RS +SII EI+ + D Sbjct: 187 KEYGIPA------SISTSRGCPGQCIFCAASGLSGGRYRRRSAESIIEEIKYLID 235 >UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO n=52 Tax=Bacteroidetes/Chlorobi group RepID=RIMO_GRAFK Length = 450 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 70/225 (31%), Gaps = 54/225 (24%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTANMYMLR 443 GC CSFC+I G +S ++++ E E + V + DL Y L Sbjct: 147 GCDRPCSFCAIPLMRGGH-KSTPIENLVTEAEKLAANGVKELILIAQDL-----TYYGLD 200 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK----KILIASGVRYD 499 R L ++GI+ +G D Sbjct: 201 LYKKR------------------------NLAELLENLVKVEGIEWIRLHYAFPTGFPMD 236 Query: 500 IAV---EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELFDTYSK 555 + +P+ V YL I +H + L M + + + F Sbjct: 237 VLEVMKREPK---------VCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFRKTVP 287 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + L I +PG +E L W+K+ RF +++ F Sbjct: 288 EMAIRTTL----IVGYPGETEEHYQELKEWVKEMRF--ERLGCFT 326 >UniRef50_Q7NRB8 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NRB8_CHRVO Length = 538 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 79/256 (30%), Gaps = 56/256 (21%) Query: 364 AYGNARIPAYEMIRFS---VNIM--RGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 + N I AY I + M RGC C+FC+ GR ++S + D I E+ + Sbjct: 194 YHLNPTIKAYTSIGDRTNYITYMGSRGCPFHCTFCAAHTVHGRKMRSFTIDRIERELSGL 253 Query: 419 RDTVPGFTGVISDLGGPTANMY---MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI 475 D T VI D +M+ S +L+C +P+ + P + Sbjct: 254 CDKYAPNTLVIED------DMFLWDKSWATSVLKIAQKLKLTCFFPNALALYALD-RPML 306 Query: 476 NLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM 535 R +GVR L +A E L ++ Sbjct: 307 EELHR-------------TGVR---------------------QLTLAVESGSARVLKEV 332 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 MK + + G Y I PG D+ + +LK + Sbjct: 333 MKKPLKL--SITNRVVEDCRDLGI--YTDCNIIIGMPGETLNDIKDTREFLKSLDANWYR 388 Query: 596 VQNFYPSPLANSTTMY 611 + P + MY Sbjct: 389 INVATPLAG---SEMY 401 >UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=4 Tax=Treponema RepID=MIAB_TREPS Length = 456 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 64/336 (19%), Positives = 102/336 (30%), Gaps = 85/336 (25%) Query: 364 AYGNARIPAYEMIRFS---------VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 Y + Y S + IM GC CSFC + GR I SR D+I+ E Sbjct: 131 RYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSFCIVPYVRGREI-SRDLDAILQE 189 Query: 415 IEAIRDTVPGFTGV--ISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHM--DTN 470 ++ + + GV I+ LG N Y R + +P + H+ Sbjct: 190 VDVLSE-----KGVREITLLG-QNVNSYRGRDREGNIVT--------FPQLLRHLVRRCE 235 Query: 471 HEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP-EHTEE 529 + I R D+ I +A L P +H Sbjct: 236 VKDQIKWIRFVSSHPK------------DL---SDDLIATIAQESRLCRLVHLPVQHGAN 280 Query: 530 GPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY------FISAHPGTRDEDMVNLA 583 G L +M SY R + Y GK + +P + PG +ED Sbjct: 281 GVLKRMR----RSYTR-----EQYLSLVGKLKASVPNVALSTDILIGFPGETEEDFEQTL 331 Query: 584 LWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 +++ F S MY+ NP +P + RL + + Sbjct: 332 DLMREVEFD--------------SAFMYH--YNPREGTPAYDFPDRIPDATRIARLQRVI 375 Query: 644 ----------LRYHDPANWPLIRQALEAMGKKHLIG 669 +R P++ ++ + L G Sbjct: 376 ALQMSTTLKKMRARVGKTLPVLVESRSRNNPEELFG 411 >UniRef50_Q0RDV0 Ribosomal protein S12 methylthiotransferase rimO n=43 Tax=Actinomycetales RepID=RIMO_FRAAA Length = 545 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 65/368 (17%), Positives = 102/368 (27%), Gaps = 88/368 (23%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT--------VPGFTGVISDLGGPT 436 GC C+FC+I G + SR D ++ E E + T DLG Sbjct: 196 GCDRRCAFCAIPSFRGSHV-SRPADDVLAEAEWLAGEGARELVLVSENSTSYGKDLG--- 251 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 + L + + GI ++ V Sbjct: 252 ---------------------------------DLRALEKLLPQLAAVPGIVRVRT---V 275 Query: 497 RYDIAVEDPRYIKELATHHVGG---YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDT- 552 A P ++ L T G YL ++ +H L +M + G + F +L D Sbjct: 276 YLQPAELRPSLLEVLLT--TPGLAPYLDLSFQHASPAVLRRMRRFGGS--EHFLDLLDRG 331 Query: 553 --YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 G + I PG + D+ LA +L+ LD V F Sbjct: 332 RGLLPGLGARSNV----IVGFPGETEADVDILAEFLEAA--ELDAVGVF----------- 374 Query: 611 YYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 G + S + + + +RR + + + L A + IGS Sbjct: 375 ---GYSDEEGTEAVSLPGKIAEEEIERRRVQI----------TDLVEQLTATRAQERIGS 421 Query: 671 RRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAK 730 R LV T + S +P G Sbjct: 422 RVQVLVEEITDGIAAGCAGHQQPDADGSCLVRLPGPAGAAAGPPAGGPSGTGQPGLPGQP 481 Query: 731 KRPKAAVG 738 +P VG Sbjct: 482 GQPGVEVG 489 >UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MIAB_AKKM8 Length = 458 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 116/329 (35%), Gaps = 72/329 (21%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTAN 438 V+IM+GC C++C + G +SR +++E++ + D V T L G N Sbjct: 164 VSIMQGCEMKCAYCIVPYTRGAE-RSRPIRDVVDEVKMLADAGVKEVT-----LLGQIVN 217 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS---- 494 Y + ++ + + L +++GI++I S Sbjct: 218 RYGRQMETAGGKGG---------------------FVQLLEAVHEVEGIRRIRFVSPHPI 256 Query: 495 GVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDT 552 G R D+ V+ Y+ +L +H H + L M +P +Y Sbjct: 257 GFRQDL-VQAFTYLPKLCSHIHFPMQ------SGSDRILKMMRRPYRNETYLDLCSRM-- 307 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 KQA + + I PG +ED +L + ++QVQ + Sbjct: 308 --KQARPDLSITTDIIVGFPGETEED------YLLTRQ-AVEQVQ---------FDNAFI 349 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 +P + +P+ K+ R L ++ + + L+G+ + Sbjct: 350 FRYSPRRGTPAAVMENQIPEEVKEARNQDLLA---------VVNEIAIRKNR-DLVGTVQ 399 Query: 673 DCLVPAPT-IEEMREARRQNRNTRPALTK 700 + L+ P+ R + R ++N + Sbjct: 400 EVLLEGPSKTNAARLSGRTSQNKPVMVDA 428 >UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO n=47 Tax=Bacteria RepID=RIMO_DEIGD Length = 485 Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 78/226 (34%), Gaps = 40/226 (17%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS-DLGGPTAN 438 V I GC CSFC I + GR + SR +++ E + +IS D Sbjct: 161 VKIAEGCNHTCSFCIIPKLRGRQV-SRDAGAVLYEAYRLIAGGTKELMIISQDTSA---- 215 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y + + +E ++ I+L + ++ + VR Sbjct: 216 -YGVDLRHRTSEFQGEQVR--------------AHLIDLAEKLGEM--------GAWVRM 252 Query: 499 DIAVEDPRYIKELATHHVGG----YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 P +++ + G YL + +H L +M +PG G + Sbjct: 253 HYVYPYP-HVERIVELMSQGKILPYLDVPLQHASPAVLKRMRRPGAGKQLDTIRRWREIC 311 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + FI PG +ED L +L++ RLD+V F Sbjct: 312 PELVIRST----FIVGFPGETEEDFQLLLDFLEEA--RLDRVGAFT 351 >UniRef50_B8FY82 Cobalamin B12-binding domain protein n=4 Tax=Bacteria RepID=B8FY82_DESHD Length = 456 Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 90/283 (31%), Gaps = 69/283 (24%) Query: 342 IPLSTEEMDSVFALPY-KRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSI-TEHE 399 P + +D LP+ R Y + + S+ GCFG C+FC++ + Sbjct: 154 RPYTP--LD---DLPFPDRSLTARYRSHYFSDWMKPIASIRTSLGCFGRCNFCALWSITN 208 Query: 400 GRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCV 459 G+ +Q RS + I+ E++ I++ + F C Sbjct: 209 GKYLQ-RSPERIVAELQGIQEEIVFF------------------CDDE------------ 237 Query: 460 YPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKE-----LATH 514 +C + +L + A GI+K G R D V+ P + L Sbjct: 238 --SMCDTRRMDQ--LADLIQEA----GIRKKYFLYG-RVDTIVKHPELFAKWKNIGLIQV 288 Query: 515 HVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPG 573 VG E + L + K + + ++ + + + P F Sbjct: 289 FVGF------ESFSDERLQGLNKNITVAQQEEAVKILNDLNIDIYASFVIDPSF------ 336 Query: 574 TRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 + L + +K + P P T +Y K+ Sbjct: 337 -TRPEFAQLIAYTRKLNIAYAALSVLTPLPG---TALYEQNKD 375 >UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6E2_9ACTN Length = 504 Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 89/277 (32%), Gaps = 52/277 (18%) Query: 362 HPAYG---NARIPAYEMIR-FS--VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEI 415 HP + A I S V I GC C+FC+I G SR + I +EI Sbjct: 155 HPTFSFSQELSARALRTIEGTSAFVKISEGCDRYCAFCAIPFIRG-HYASRCPEEIFSEI 213 Query: 416 EAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVY-PDICPHMD---TNH 471 + + G I +G T ++ S A + S ++ P D T H Sbjct: 214 TML---MEGGVKEIILIGQDTG-IWGEDFSSRGAASVLHKDSDLHDPSSASSFDKNSTQH 269 Query: 472 E--PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPE---- 525 E L R + K I + ++ ++L ++ PE Sbjct: 270 ESMNLAWLLREVARIVRPYKAWIRV-----LYLQPEGMTEDLIA-----TIRDTPEVLPY 319 Query: 526 ------HTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF------ISAHPG 573 H E L KM + G S + +LF + IP + P Sbjct: 320 IDIPIQHCNERLLKKMGRSGSAS--QLHKLFAHLRHE-------IPQMVLRTTGMVGFPT 370 Query: 574 TRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 DE+ L + K+ F V ++ + M Sbjct: 371 ETDEEAAELVDFFKQEEFDYMSVFSYSQELGTTAAKM 407 >UniRef50_B6ADR0 Radical SAM domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6ADR0_9CRYT Length = 548 Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 96/276 (34%), Gaps = 59/276 (21%) Query: 345 STEEMDSVFALPYKRVPHPAYGNARI---PAYEMIRFSVNIMRGCFGGCSFCSITEHEGR 401 +T++ D + R+P P +I P E+I SV GC G C++C G Sbjct: 214 TTKKQDKA---TFSRLP-PL-NLPKIRKNPLVEIITVSV----GCLGNCTYCKTKYSRGN 264 Query: 402 I-------IQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCR 454 + I +R + S+ I+ I T D+G N+ L + Sbjct: 265 LGSYTIETILNRVKTSLKEGIKQIWLTSEDTGAYGKDIG---TNLSSLIYQILNI----- 316 Query: 455 RLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATH 514 + PD+ + + P I + +D+ + + P + L Sbjct: 317 ----IPPDVMIRIGMTNPPYI--LNQIQDMVEV--------------LSHPNVFEFL--- 353 Query: 515 HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGT 574 H+ L+ M + + F +L D S Q + I PG Sbjct: 354 HIPVQ------SGSNKVLTNMRRDYTR--EDFCKLVDEISSQLSLI-TIATDIICGFPGE 404 Query: 575 RDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 +ED + +KK++F + + FYP P + M Sbjct: 405 TEEDHQDTVELIKKYKFPVINISKFYPRPGTPAAKM 440 >UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=MIAB_DICT6 Length = 440 Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 77/231 (33%), Gaps = 49/231 (21%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS-DLGGPTANMYMLR 443 GC C++C + GR +SR + II E+E + GV+ L G + Y Sbjct: 154 GCNNFCTYCIVPYLRGRE-KSRDPEEIIREVEYLASQ-----GVVEVTLLGQNVDSYGK- 206 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 D + +L + IK+ +R+ Sbjct: 207 ------------------------DLGNVDLADLLVEIHRIPRIKR------IRF--LTS 234 Query: 504 DPRYIKELATHHVGGYLKIAPE-HT-----EEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 PR + + V + K+ P H + L +M + +Y +K L + + Sbjct: 235 HPRDVSDKLIRVVATHPKVCPHWHLPLQAGSDRILRRMGR--GYTYSEYKALIEKIRAEI 292 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANST 608 K + I PG +ED + L++ +F + + P + Sbjct: 293 PKASFSTD-IIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAA 342 >UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E278_DICTD Length = 441 Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 81/232 (34%), Gaps = 49/232 (21%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS-DLGGPTANMYMLR 443 GC C++C + G+ +SR II EIE + + GV+ L G + Y Sbjct: 155 GCNNFCTYCIVPYLRGKE-KSRDPQEIIKEIEHLANQ-----GVVEVTLLGQNVDSYGK- 207 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 D + +L + GIK+ +R+ Sbjct: 208 ------------------------DLGNVDLADLLVEIHKIPGIKR------IRF--LTS 235 Query: 504 DPRYIKELATHHVGGYLKIAPE-HT-----EEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 PR + + + V + KI P H + L +M + +Y+ +K L + + Sbjct: 236 HPRDVSDKLINVVATHPKICPHWHLPLQAGSDRILRRMGR--GYTYNEYKALIEKIRAKI 293 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 + + I PG +ED + L++ +F + + P + + Sbjct: 294 PRASFSTD-IIVGFPGEEEEDFLATRRALEEIKFDTVNLAIYSKRPGTPAAS 344 >UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO n=48 Tax=cellular organisms RepID=RIMO_PSE14 Length = 447 Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 76/235 (32%), Gaps = 61/235 (25%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS--------DL---- 432 GC CSFC I G+++ SR +++E + + + VIS D+ Sbjct: 152 GCNHSCSFCIIPSMRGKLV-SRPVGDVLDEAKRLVKSGVKELLVISQDTSAYGVDVKYRT 210 Query: 433 ----GGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK 488 G P C++ + RL VYP + I L + L Sbjct: 211 GFWDGQPVKTRMTELCQALGSMGVWVRLHYVYPYP----HVD--ELIPLMAAGKILP--- 261 Query: 489 KILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKE 548 YL I +H L M +P D+ Sbjct: 262 ------------------------------YLDIPFQHASPKILKLMKRPAFE--DKTLA 289 Query: 549 LFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 + +Q + + FI PG +ED L WL + +LD+V F SP Sbjct: 290 RIKNWREQC-PDLIIRSTFIVGFPGETEEDFQYLLDWLTEA--QLDRVGCFQYSP 341 >UniRef50_Q1ISQ8 Fe-S protein, radical SAM family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISQ8_ACIBL Length = 591 Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 79/228 (34%), Gaps = 18/228 (7%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 SV +RGC CSFCS+ +G+ + R+ S+I EI +R F + D N Sbjct: 229 SVQTIRGCPKHCSFCSVWRTDGQKPRQRNFQSVIEEIVDLRRRGFRFIALADD------N 282 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y + R + + +++ E +L + L + Sbjct: 283 FYPVTLTDLRLAKAQNNTEKL-----RNLEQIREERFHLMAQLARLPKDMVFFTQ--ITM 335 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAG 558 + A ED ++ + ++ G L + E L + K S DR + + ++ G Sbjct: 336 E-AAEDAAFLDAMRAANIKGAL-VGVEAVTPEGLKAVYKDFNYSGDRLAQQLQEF-RRHG 392 Query: 559 KEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 +++ FI P + E K Q P P Sbjct: 393 V--HVLGSFIFGLPTDKPETFDATVDLALKSGITFAQFVMMTPFPGTV 438 >UniRef50_A8A9E9 Radical SAM domain protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A9E9_IGNH4 Length = 421 Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 109/314 (34%), Gaps = 67/314 (21%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 + I RGC CS+C T ++ RS +++I +RD I+ P A Sbjct: 159 IEITRGCPFACSYCQTTFMFKAFVRHRSIENVIKYASIMRDMGLKDMRFIT----PNALS 214 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA--SGVR 497 Y + P E L R + L G++ + S VR Sbjct: 215 YGGDGRRPNLEAV----------------------EELLARLKKL-GVRTFFGSFPSEVR 251 Query: 498 YDIAVEDPRYIKE----LATHHVGG-YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDT 552 P ++ E + +V L I + + L ++ + +++ Sbjct: 252 -------PEFVNEESIKILKKYVSNKRLVIGAQSASDAVLKRIHR--GHAWEDVVN---- 298 Query: 553 YSKQAGKEQYLIPY--FISAHPGTRDEDMVNLALWLKKH---RFRLDQVQNFYPSPLANS 607 + + + +P FI PG +EDM+ ++K R + F P P Sbjct: 299 -AVEVSVKHGFVPEVDFILGLPGESEEDMMETLRGMRKLASMGARA-HLHYFMPLPGTP- 355 Query: 608 TTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHL 667 + Y PL + K V K + + L+ + +W ++ + +K + Sbjct: 356 --LAYADPTPLPERVRK----EVAKLVGEGKGWGQWLK-QEEVSWKIVE-----LRRKGV 403 Query: 668 IGSRRDCLVPAPTI 681 I +R L+ +P + Sbjct: 404 ILPKRRALISSPGL 417 >UniRef50_A1RSC3 Radical SAM domain protein n=6 Tax=cellular organisms RepID=A1RSC3_PYRIL Length = 565 Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 105/324 (32%), Gaps = 73/324 (22%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCF----GGCSFCSITEHEGRIIQSRSEDSIINEIEA 417 HP YG I E R C GGCSFC+ + + +RS + I+ E+EA Sbjct: 178 HPNYGRNLIVELE-------TYRSCPRYLSGGCSFCTTVAY--GPVVTRSIEGIVREVEA 228 Query: 418 IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 + GV+ G A+ Y + E+ +P P+ + + + Sbjct: 229 LYKA-----GVVHFRLGRQADFYTYMARDTGREE--------FPR--PNPSAIEKLLVGI 273 Query: 478 YRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYL-KIAPEHTEEGPLSKMM 536 A DLK + + G E K L + G + + E + + Sbjct: 274 RNAAPDLKTLHIDNVNPGTVARWKAESIEITKLLVKYGTPGNVAAMGIETADPRVVKI-- 331 Query: 537 KPGMGSYDR----FKELFDTYSKQAGKEQYLIPY------FISAHPGTRDEDMVNLALWL 586 + Y E+F Y + G +PY F++ PG E +L Sbjct: 332 -NNLKVYPEEALDAIEIFTKYGSERGYNG--MPYLLAGVNFVAGLPGETAETYRLNIEFL 388 Query: 587 KK--------HRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 638 K+ R + QV F P +++ + V K R+ Sbjct: 389 KQILERGLLVRRVNIRQVLVF-----------------PTSRLWPMARKVM----YKLRQ 427 Query: 639 LHKALLRYHDPANWPLIRQALEAM 662 K L++ R+ L + Sbjct: 428 HRKYFLQFKKWTREVFDREMLRRI 451 >UniRef50_C1EAP4 Predicted protein n=2 Tax=Micromonas RepID=C1EAP4_9CHLO Length = 456 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 71/211 (33%), Gaps = 41/211 (19%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSE--DSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 GC C+FC+I G+ RS+ D II E +A+ DT +I++ N + + Sbjct: 163 GCDHKCTFCAIPGFRGKF---RSKPWDPIIEEAKALADTGARELCLIAE----DTNQWGM 215 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 K+ L + G++ I I Y Sbjct: 216 DLKASDGRG----------------------LAELLEALAVIDGVEWIRILYA--YPSYF 251 Query: 503 EDP--RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE 560 DP I ++ V Y+ I +H L +M +P + Sbjct: 252 SDPLIDAIADIPQ--VAKYIDIPLQHITNLSLLRMNRPPRQHTEDLLYKLRDRIPGLALR 309 Query: 561 QYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 FIS PG +E+ +L + ++ +F Sbjct: 310 TT----FISGFPGETEEEHEDLMRFCREFKF 336 >UniRef50_C6PBV1 Radical SAM domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PBV1_CLOTS Length = 448 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 22/156 (14%) Query: 349 MDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSIT--EHE-GRIIQS 405 +D + ++PY P I + S+ RGC+G CSFCS+ + G+ + Sbjct: 164 IDDLDSMPY-----PERDTLPIVILKSGFASMLTSRGCYGRCSFCSVGPFFSQFGQKYRQ 218 Query: 406 RSEDSIINEIEAIRDTVPGFTGVISD---LGGPTANMYMLRCKSPRAEQTCRRLSCVYPD 462 RS +++I+EI + + +D +GG N + AE+ +R + Sbjct: 219 RSVENVIDEIRILYEKYNVRNLFFNDAEFIGGKGKNYERVY---KLAEEIIKRGMDINFS 275 Query: 463 I-CPHMDTNHEPTINLYRRARDLKGIKKILIA--SG 495 I C D + + ++ ++A G+K++ + SG Sbjct: 276 IQCRVNDVD-KELFSILKKA----GLKRVFLGVESG 306 >UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=534 Tax=Proteobacteria RepID=MIAB_PSYCK Length = 497 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 83/249 (33%), Gaps = 50/249 (20%) Query: 371 PAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS 430 P E + V+IM GC CSFC + G + SR D ++ EI+++ I+ Sbjct: 190 PRVEGFKAFVSIMEGCSKYCSFCVVPYTRGEEL-SRPLDDVLAEIDSLAAQGVR---EIN 245 Query: 431 DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI 490 LG N+ R + IC L + G+++ Sbjct: 246 LLG---QNVNGYRGEKDDG------------SIC--------RFAELLHYVSHVDGVER- 281 Query: 491 LIASGVRY---------DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG 541 +RY D ++ + EL +H L + + L+ M + Sbjct: 282 -----IRYTTSHPLEFTDDIIDAYAQLPELVSH-----LHLPVQSGSNAILAAMKR--NH 329 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 + D + + K + +L FI PG D+D + K+ F + Sbjct: 330 TIDVYINQINKL-KAIRPDIHLSSDFIIGFPGETDQDFQDTLNLAKELNFDHSYSFIYSK 388 Query: 602 SPLANSTTM 610 P + + Sbjct: 389 RPGTPAAEL 397 >UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSA4_9FIRM Length = 437 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 73/245 (29%), Gaps = 61/245 (24%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG- 424 ++ E ++ S GC CS+C I + G+ +SR + I E+ + Sbjct: 137 KKEKVNITEYVKIS----EGCNNNCSYCIIPKLRGKN-RSRRIEDIYEEVSYLAKNGARE 191 Query: 425 ---FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 +D G ++Y R S L + Sbjct: 192 IILIAQNTTDYG---IDLYG-------------RYS----------------LSKLIKEI 219 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGG-----YLKIAPEHTEEGPLSKM- 535 + IK I + + + + EL + Y+ I +H + L M Sbjct: 220 SKINDIKWIRV-------LYLYPDHFTDELINEFINNDKLVKYVDIPLQHYSDHVLKLMD 272 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 E K + FI PG +ED L ++ + ++ D+ Sbjct: 273 RHTDKEHIKNLIEKLRKI-----KGLVIRTTFIVGFPGESEEDFNILREFI--NTYKFDK 325 Query: 596 VQNFY 600 + F Sbjct: 326 LGVFT 330 >UniRef50_D0RQJ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQJ6_9RICK Length = 435 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 70/236 (29%), Gaps = 51/236 (21%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V I GC C FC + G SR + I++EI ++ D G Sbjct: 153 VTIQEGCDKFCKFCVVPYTRGPEF-SRDHNKILDEILSLTDN-----GT----------- 195 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 + + N L ++ + +K+ +R+ Sbjct: 196 ---------------KEIVLLGQNVSAYKNNDISLARLIKKIAKINNVKR------IRF- 233 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPE-HT-----EEGPLSKM-MKPGMGSYDRFKELFDT 552 + +EL + G K+ P+ H + L M Y E F Sbjct: 234 TTSHPNDFDQELISLF-GEEPKLMPQLHLPVQSGSDKILKLMNRNHTRSDYLNLIEKFRK 292 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANST 608 FI PG +ED ++ +K+ +F L + P +T Sbjct: 293 EKSDI----QFSSDFIVGFPGETNEDHLDTINLVKEVKFSLSYSFIYSQRPGTPAT 344 >UniRef50_B8FE11 Radical SAM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FE11_DESAA Length = 484 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 62/324 (19%), Positives = 109/324 (33%), Gaps = 71/324 (21%) Query: 340 PAIPLSTEEMDSV-----FALPY-KRVPHPAYGNARI--PAYEMIRFSVNIMRGCFGGCS 391 PA + E++D + PY HP +G + P V RGC C Sbjct: 170 PAPQI--EDLDKLPFPAWHLFPYHLYECHPLFGVNGVCLP--------VIASRGCPYSCF 219 Query: 392 FCS-ITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE 450 FC+ + G +++RS ++++E+E + D A M L Sbjct: 220 FCAQASAFNG--VRARSVQNVVDEMEYLLDRF-------------NAPMSGLA------- 257 Query: 451 QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKE 510 C+YP H+ ++ R+ D K K+ A+ +R D+A +P + Sbjct: 258 ------DCMYP-------LTHKMGMDFCRQLIDRKLHTKLCWATEMRVDMA--EPELLG- 301 Query: 511 LATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI--PYFI 568 + + E E L ++ K +FK + K+ L +F+ Sbjct: 302 IMKEANAIQIAYGVESGNEAMLQRLGK-------KFKMEDARRAIALTKQAGLSTCGFFV 354 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 PG + + K+ + P P ++ GK + + Sbjct: 355 LGFPGETPSSCRDTIRFAKELDLDFAKFNIAVPYPGTPFFDSWWDGKVEDMEYHKYNAWF 414 Query: 629 FVPKGDK-----QRRLHKALLRYH 647 KGD + K LLR+ Sbjct: 415 SPQKGDSLLHVPEDMTQKELLRFQ 438 >UniRef50_C7IJC0 Radical SAM domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IJC0_9CLOT Length = 404 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 102/282 (36%), Gaps = 65/282 (23%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 F++ I GC C++C I + G I S+ D I E + G+ I+ +GG Sbjct: 136 FTIIISTGCMMKCTYCVIKKAHG-YITSKPVDEICEEFKH--AVRLGYK-NIA-IGGTDT 190 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 ++Y ++TN I L ++ R + K + + Sbjct: 191 SVYGHD-----------------------INTN---FIALIKKLRAIDSTVKFYVDNLHP 224 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 +++ +I ELA + YL IA +H ++ L +M + F+ Sbjct: 225 HNLLKYRDDFI-ELAGQNAFSYLHIAFQHIDDVMLDRMGR---------TAHFEQVYAMI 274 Query: 558 GKEQYLIPY------FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 G+ + + P FI A PG +E L ++KK D + ++Y Y Sbjct: 275 GEMKKVCPKLILFTDFICAFPGETEEQYEKLLDFVKK-----DTIFDYY----------Y 319 Query: 612 ---YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPA 650 Y + Y + K ++ ++L A R D Sbjct: 320 IHDYCDIDGAVSYNYTDKISDDVKTERCQKLMIAFERRKDEK 361 >UniRef50_C5UZW6 Radical SAM domain protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5UZW6_9PROT Length = 417 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 19/117 (16%) Query: 308 AHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN 367 A+R+ + A ++ R V ++ P + MD F LP Sbjct: 144 IKAARLPLINCSYLSAEGVISGEWTRTVELDQFPCPYTDGLMDKFFELP----------- 192 Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 IP YE RGC C+FC+ E I +S ++I I I V Sbjct: 193 -LIPLYE-------TTRGCPFSCTFCTDGISEKSKIFRKSHENIEESIAYIAQKVQH 241 >UniRef50_B4S6S9 Radical SAM domain protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S6S9_PROA2 Length = 473 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 72/227 (31%), Gaps = 25/227 (11%) Query: 201 LVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLP 260 ++ +A L I D + + E L +P I I G Sbjct: 29 ILSLAAWLRSHGVTLNIADYQLAGGDMGEQLLPSRFASFIEEHSPAPIIGISTMGGMLPV 88 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP 320 + K + + P + A L +P Sbjct: 89 VLMAVEEYKARHPEKTIILGGSGPAGVAAHILRAFPAVDCIFCGEGEAALLEFLEKNGDP 148 Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMI---R 377 ++ + GD + NP +S ++D + +PAY++I R Sbjct: 149 SSVAGVVYREGDS-IVENPARKRIS--DLDVL----------------PVPAYDLIDMDR 189 Query: 378 FSVN---IMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 ++V RGC C+FC G+ + RS D+++NEI +R Sbjct: 190 YAVVNVSTSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTR 236 >UniRef50_D2RHE6 Radical SAM domain protein n=2 Tax=Archaeoglobaceae RepID=D2RHE6_ARCPR Length = 458 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 77/375 (20%), Positives = 133/375 (35%), Gaps = 70/375 (18%) Query: 288 EKTYVLLPSFEKVKGDKVLYAHASR-ILHHETNPGCARALMQKHGDRYVWINPPAIPLST 346 E Y LL + E++ DK R +++ E R + +G R N Sbjct: 120 EGEYTLLEAVERL--DKEKSLEGVRGLIYKE----NGRII--DNGKREFIQN-------- 163 Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYEMI-----RFSVNIMRGCFGGCSFCSITEHEGR 401 +D LP+ PAY + Y ++ F + RGC GC +C+ + GR Sbjct: 164 --LD---ELPF-----PAYDLLPLEKYSVLGQKLEHFPMMSSRGCPFGCRYCASSLFMGR 213 Query: 402 IIQSRSEDSIINEIEAIRDTV-PGFTGVISDLGGPTANMYMLR--CKSPRAEQTCRRLSC 458 ++RS +++++EIE ++D + G D T N + C+ + SC Sbjct: 214 RFRARSAENVVDEIEWLQDKFGARYVGFGDDTF--TLNKKRVLKICEEIKRRGLDVEWSC 271 Query: 459 VYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR-YDIAVEDPRYIKELATHHVG 517 +DT TI + A I GV + + + Y K ++ V Sbjct: 272 -----SSRVDTIDGETIKKMKSAGCN------CIYYGVESANQKILNEYYRKRISLEQVK 320 Query: 518 GYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFD---TYSKQAGKEQYLIPYFISAHPGT 574 +K EH S ++ M + + + + + L PY PGT Sbjct: 321 DAVKKTKEHGILTVCSFIIGAPMETREDMMKTLKFSIKLNPDYAQYSILTPY-----PGT 375 Query: 575 RD-EDMVNLALWLKKHRFRLDQ-----VQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 ++ WL F ++NFY +P S + Y + + Sbjct: 376 EIYKEAKE-KGWLLTENFDEYTCGKPVLKNFYLTPKEISRFLRYC------YMRFYLRPK 428 Query: 629 FVPKGDKQRRLHKAL 643 F+ K K + + A Sbjct: 429 FIWKEIKNKNIKIAF 443 >UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=CK5P1_DROME Length = 583 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 61/322 (18%), Positives = 102/322 (31%), Gaps = 54/322 (16%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT-VPGFTGVISDLGGPTAN 438 V+IMRGC C++C + GR +SR SI+ E++A+ + V T L G N Sbjct: 245 VSIMRGCDNMCTYCIVPFTRGRE-RSRPLASIVAEVKALAEQGVKEVT-----LLGQNVN 298 Query: 439 MYMLRCK----SPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 Y R S VY T P L R +I S Sbjct: 299 SYRDRTAQEEQDSLKATPVPGFSTVYKP-----KTGGTPFAALLRSVAQAVPDMRIRFTS 353 Query: 495 GVRYDIAVEDPRYIKELATHH--VGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFD 551 D + E + E+ H V L + + L +M + +Y + Sbjct: 354 PHPKDFSDE----VLEVIRDHPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIR 409 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 + G FI G +E+ + + QVQ + Sbjct: 410 QFLPNVGLSSD----FICGFCGETEEEFQDTVSLI-------QQVQ------YNVAYLFA 452 Query: 612 YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 Y+ + +DV + K RL + + + R+ + +K Sbjct: 453 YSMREKTTAHRRYKDDVPI--NVKNERLQRMV---------QVFREGATQLHRK---MEG 498 Query: 672 RDCLVPAPTIEEMREARRQNRN 693 ++ L+ + +A RN Sbjct: 499 QEQLILIEGKSKRSDAHWFGRN 520 >UniRef50_C5ZWL4 2-methylthioadenine synthetase n=4 Tax=Helicobacter RepID=C5ZWL4_9HELI Length = 423 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 78/203 (38%), Gaps = 49/203 (24%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRS--EDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 + I GC CS+C I G+ +RS ++ IIN+I + GF+ I L G Sbjct: 138 IKIQEGCDFACSYCIIPSVRGK---ARSFEKNKIINQITKLTQN--GFSEFI--LTG--T 188 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 NM K ++E +L + +K++ + S Sbjct: 189 NM-GSWGKD-----------------------SNENLTSLLESICAIPEVKRLRLGS--- 221 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ- 556 + + ++ L + +L IA +HT L M + ++++ ELF+T +K+ Sbjct: 222 LEPSQITQDFLDFLDHPKIERHLHIALQHTSPFMLKLMNR--QNTFEKDLELFNTLAKKG 279 Query: 557 --AGKEQYLIPYFISAHPGTRDE 577 G + FI HP E Sbjct: 280 FALGSD------FIVGHPQESQE 296 >UniRef50_A6LBP0 Fe-S oxidoreductase n=4 Tax=Bacteroidales RepID=A6LBP0_PARD8 Length = 485 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 63/307 (20%), Positives = 94/307 (30%), Gaps = 59/307 (19%) Query: 309 HASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV---PHPAY 365 + +L + R L G +V P P+ + +D LP+ H Sbjct: 144 ELANVLDAGKDLREVRGLCFWDGKEFVRTA-PMPPM--KNLD---DLPFASQFIKEHLNE 197 Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSI--TEHEGRIIQSRSEDSIINEIEAIRDTVP 423 + A + RGC C+FC T H G ++RS ++++ E E I P Sbjct: 198 RDYFFAAATYPSIQIFTGRGCPFRCNFCVYPQTMH-GHAFRARSAENVVAEFEYIAANFP 256 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 V+ + TAN R CR L + Sbjct: 257 DVKEVVIEDDTFTAN-------KKRVLDICR----------------------LLVEKKL 287 Query: 484 LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP--EHTEEGPLSKMMKPGMG 541 K +K + A R D+ +E LA G L I P E + L + K Sbjct: 288 NKRLKWLCNA---RVDLDLETM-----LAMKKAGCRL-IIPGIESGSQQILDNIKKGTKV 338 Query: 542 SYDRFKELFDTYSKQAGKEQYLI-PYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 Y F Y A K LI ++ + G E M + Q Sbjct: 339 EY------FYQYVANAKKAGLLIHACYMVGNQGETRETMEETLRLALRLNTDTAQFFPLI 392 Query: 601 PSPLANS 607 P P + Sbjct: 393 PYPGTEA 399 >UniRef50_Q0YRQ9 Cobalamin B12-binding:Radical SAM n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YRQ9_9CHLB Length = 491 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 12/72 (16%) Query: 335 VWINPPAIPLSTEEMDSVFALP-YKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFC 393 + N A L+++E+D + LP Y R+ Y + I RGCFG C+FC Sbjct: 166 IIQNQIAELLTSQELDDL-PLPLYDRLAEKQYRSLTI----------ESSRGCFGNCAFC 214 Query: 394 SITEHEGRIIQS 405 ++ + S Sbjct: 215 AVPFKKSWRPMS 226 >UniRef50_A8J945 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J945_CHLRE Length = 420 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 42/148 (28%), Gaps = 16/148 (10%) Query: 468 DTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATH-----HVGGYLKI 522 + L R L+G++ I I + + EL V YL + Sbjct: 188 RRDGRDLAQLLRELGKLEGLRWIRI-------LYAYPSYFNDELIDEIANNPKVCKYLDM 240 Query: 523 APEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNL 582 +H L M +P + FIS PG DE L Sbjct: 241 PLQHIANLTLLAMNRPPKEHTTKLLAKLRERIPGLALRTT----FISGFPGESDEQHREL 296 Query: 583 ALWLKKHRFRLDQVQNFYPSPLANSTTM 610 ++K +F F + TM Sbjct: 297 VDFVKTFKFERMGCFAFSEEDGTPAATM 324 >UniRef50_C9M8F1 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8F1_9BACT Length = 453 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 16/145 (11%) Query: 470 NHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEE 529 + +L ++ G+K++ + S + I D + L +L + + ++ Sbjct: 217 SGRGLADLIEAVGNVPGLKRLRLGSLEPFGIDERDIDAMASLTVF--APHLHLPLQSGDD 274 Query: 530 GPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDE------DMVNLA 583 G L +M +PG +F EL + G ++ + A PG DE +++ A Sbjct: 275 GVLRRMRRPGTS--GQFLELVKKLRRALGDGLHVSTDVMVAFPGETDEAFARTLEVLQEA 332 Query: 584 LWLKKHRFRLDQVQNFYPSPLANST 608 + H F F P + Sbjct: 333 RIGRVHGF------IFSIRPGTPAA 351 >UniRef50_C6HZ25 Radical SAM domain protein n=3 Tax=Leptospirillum RepID=C6HZ25_9BACT Length = 525 Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 8/60 (13%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 H Y + + RGC GCSFC T EG+ + R + +I+EI RD Sbjct: 239 HSLYHGKTV--------GIQTKRGCPYGCSFCLYTYIEGKRVYYRDPEDVIDEIRQYRDR 290 >UniRef50_Q01V42 Radical SAM domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01V42_SOLUE Length = 524 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 11/129 (8%) Query: 304 KVLYAHASRILHHET-NPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALP-YKRVP 361 + A A++ E P A QK + P IP ++D +P + + Sbjct: 125 PRIVADAAKGELREVYKPVDAFGQEQKPS----LKDYPQIPWQKLDIDQFNRIPGFFKRI 180 Query: 362 HPAYGNARIPAYEMIRF-SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD 420 YG+ A+E + RGC GC FC++T G I+ R+ +SI+ E+ A+++ Sbjct: 181 MRHYGH----AWETFHIIPIESGRGCPYGCEFCTVTGFFGDSIRFRTNESIVTEMLALKE 236 Query: 421 TVPGFTGVI 429 +G I Sbjct: 237 RAKASSGKI 245 >UniRef50_Q2SXQ0 Radical SAM domain protein n=83 Tax=Bacteria RepID=Q2SXQ0_BURTA Length = 503 Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 77/236 (32%), Gaps = 37/236 (15%) Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 A P S + D + V+E L D + T P + EDL + Sbjct: 71 AALVPGSRVLDAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAEDLKKMKPSMLV 130 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGD---KVLYAHASRILHHETNPGCARA 325 AV +V F+ D +A + + + Sbjct: 131 GMVGAKVAVDPHNSLTATQAIDFVCREEFDYTCKDIAEGKPFAEILGMSYRAKD-----G 185 Query: 326 LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNA------RIPAYEMIRFS 379 ++ +G R + N MD LP+ P Y I S Sbjct: 186 SIEHNGPRPMIEN----------MD---ELPFVA---PVYKRDLKIDNYFIGYLNYPYVS 229 Query: 380 VNIMRGCFGGCSFC----SITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISD 431 + RGC C+FC ++ H R+ RS +S++ E++ IRD +P ++ D Sbjct: 230 IYTGRGCRSKCTFCLWPQTVGGHRYRV---RSVESVLAEVKWIRDNMPEVKEIMFD 282 >UniRef50_Q0W344 Putative 2-methylthioadenine synthetase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W344_UNCMA Length = 404 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 56/315 (17%), Positives = 88/315 (27%), Gaps = 61/315 (19%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 ++ I GC G CS+C + GRI + + D + AI + D G Sbjct: 120 TIKIAEGCNGQCSYCIVRLVRGRIRSTPAPDIVEAARRAIAEGASELFLTSQDSGA---- 175 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y L L R L G K+ I + Sbjct: 176 -YGLD--------------------------TGVRLPTLIRSIASLPGNFKVRIGMMNPF 208 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAG 558 IA P + L V + I + + L M +P + + Sbjct: 209 SIADILPDMVDVLNHPKVYRFAHIPVQSGSDRILKLMQRPYTE--QEYSAIISRLRAGVP 266 Query: 559 KEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPL 618 + Y I P + D L+ +R + F P P + M Sbjct: 267 GITFSTDY-IVGFPTETEADFRLTLEDLRTNRPLKVNITRFSPRPGTPAAAM-------- 317 Query: 619 AKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA 678 + + K+R + L H +++A +GSRR LV Sbjct: 318 --------PDVLERTKKERS--RMLTALHHEVTSHDLKEA---------VGSRRSVLVSE 358 Query: 679 PTIEEMREARRQNRN 693 AR + N Sbjct: 359 KGKPGTVIARDPSYN 373 >UniRef50_A0B5M5 Radical SAM domain protein n=1 Tax=Methanosaeta thermophila PT RepID=A0B5M5_METTP Length = 484 Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 10/93 (10%) Query: 337 INPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSIT 396 NPP L+ EE+ +P R A+++ SV RGC GC FCSI Sbjct: 154 HNPPRALLNPEEI----EMP-NRDA--RLIRDGFYAFDVPVDSVETSRGCTQGCKFCSIN 206 Query: 397 EHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVI 429 GR S + I IE I+D G I Sbjct: 207 SMYGR---SFRKFEIKRVIEDIQDAEEHGAGSI 236 >UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT8_9BACT Length = 416 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 55/349 (15%), Positives = 107/349 (30%), Gaps = 89/349 (25%) Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV--------PGFTGVISDL---G 433 GC CSFC+I G ++SR I+ E + + T SDL G Sbjct: 124 GCDTRCSFCTIPSIRG-PLRSREPKDIVAEAVKLAEEGAKELCLVGQDLTVYGSDLSKRG 182 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 + + + + P E RL ++P + + +R L Sbjct: 183 SLSGLLDAMEAELP--EDIWLRLFYLHPS-----RVDEASLERVLNSSRILP-------- 227 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 +L I +H + L +M +P + + ++LF Sbjct: 228 -------------------------WLDIPIQHVDADVLRRMNRPPVE--EHIRKLF--- 257 Query: 554 SKQAGKEQYLIPYF----ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 +AG+ + F + PG ++ +L +++ F F P + Sbjct: 258 --KAGRRMFPDFAFRTTIMVGFPGETEKAFQSLLDFVEDVAFDRLGAFTFCPEEGTPAAL 315 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 M +P+ +K RR + + ++Q + ++ +G Sbjct: 316 M----------------PDQIPQDEKDRRYAELM----------ELQQGISLARQRGFVG 349 Query: 670 SRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKAS 718 D L+ E+ R R+ + + P + S Sbjct: 350 KEMDVLIEEVDEEDGTRWGRSFRDAPEIDGLVSISGAKDDVPGDMVRVS 398 >UniRef50_A7VVQ8 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVQ8_9CLOT Length = 491 Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 45/275 (16%), Positives = 85/275 (30%), Gaps = 56/275 (20%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V+ RGC C +C++ H GR +++RS ++++ +I D G Sbjct: 197 VHASRGCPHNCDYCAVVRHFGRKVRTRSPENVVEDIRQAIA--------FHDQG-----H 243 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 + + + + +++ I SG+RY Sbjct: 244 RRAAKILWLTD--------------DNFFADRDWAVSVLNAI----------IRSGIRYQ 279 Query: 500 IAVE-------DPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDT 552 V+ D + EL + + E E+ + K +Y + Sbjct: 280 FTVQARYEVGFDDEML-ELLKEAGFCEIAMGIEFLEDETFESLHK--KSTYAEIVRSVEN 336 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 ++ G + FI LA ++ H +Q+ Y P +Y Sbjct: 337 I-QRHGLR--VRGLFIVGADNHVKGVGERLADFVISHDICGVLIQSMYFVPGTP---VYK 390 Query: 613 TGKNPLAKIG---YKSEDVFVPKGDKQRRLHKALL 644 T KN L Y V P+ L + ++ Sbjct: 391 THKNKLIHTDWSKYNGNVVHYPEKIAPDDLQREII 425 >UniRef50_B3E8M2 Radical SAM domain protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E8M2_GEOLS Length = 622 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 26/187 (13%) Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 ++ + D+ +I GG EA+ +D R +L ++ D+L+ G GE E+ Sbjct: 84 MLRQQFPDLLLIAGGPEAT----------ADPAR--LLAEAPFDLLVVGEGELTAAELLE 131 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDL------P 260 R G P+ + + +P D L +P + + Sbjct: 132 RCLAGAPLQGLPGAAQLVNDELQVIPRAQIEDLAILPSPYLAGLLDRHIENGMVWQLSRG 191 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKG-------DKVLYAHASRI 313 C + V P E Y++ ++ DK H R+ Sbjct: 192 CPYACEFCYDGMGDRKVRRYPLDRMEQELAYLVERGASQIFALDSTFNTDKKRAKHLLRL 251 Query: 314 LHHETNP 320 + ET P Sbjct: 252 I-RETAP 257 >UniRef50_O29021 Putative methylthiotransferase AF_1247 n=3 Tax=Archaeoglobaceae RepID=Y1247_ARCFU Length = 424 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA-IRDTVPGFTGVISDLGGPTAN 438 V+I GC G CSFC+ GR ++S S D+I+ E E +R D G Sbjct: 137 VSISEGCLGKCSFCATKFARGR-LRSFSMDAIVREAERAVRAGYREIQLTSQDTGA---- 191 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA----- 493 Y + + + P L R+ +++G ++ + Sbjct: 192 -YGMD-----------KGRAMLP--------------ELLRKISEIEGEFRVRVGMMNPQ 225 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK-----PGMGSYDRFKE 548 VR I ++ + +L I + + L M + + + F+ Sbjct: 226 HAVRM-----LDELINAYSSEKIYKFLHIPVQSGDNRILEDMKRNHTVEDYVEVVEAFRN 280 Query: 549 LFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHR 590 FD + I P +E +K+ R Sbjct: 281 SFDDVL--------ISTDIIVGFPTETEEAFWKSYELIKETR 314 >UniRef50_A8F7Z2 Radical SAM domain protein n=7 Tax=Thermotogaceae RepID=A8F7Z2_THELT Length = 443 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 25/43 (58%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD 420 SV RGC C FCS ++ G I+ RS ++++ E++ ++ Sbjct: 183 TSVITSRGCPFNCEFCSASQFMGMRIRKRSVENVVEELKILKK 225 >UniRef50_Q01S25 Radical SAM domain protein n=2 Tax=Acidobacteria RepID=Q01S25_SOLUE Length = 504 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 139 RATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGE 198 R T+ + K + +P++LGG SL + L D ++ G GE Sbjct: 78 RETVQIAREVKRLYPKMPIVLGGWHPSL------------LPDQTLAAEYIDAVVVGQGE 125 Query: 199 RPLVEVAHRLAMGEPISEIRDV 220 L+ V RL GE + I V Sbjct: 126 EALLAVVQRLEAGESLEGIPGV 147 >UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D7J9_PARTE Length = 504 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 + I V+IMRGC CSFC + GR +SR+ +SI+ EI+ + Sbjct: 180 DSITTYVSIMRGCNNMCSFCVVPFTRGRE-RSRNPESILEEIQILTQK 226 >UniRef50_B3E950 Radical SAM domain protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E950_GEOLS Length = 518 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 ++ RGC CSFC+ GR ++ RS S+ E+ +RD Sbjct: 192 ISSSRGCPAACSFCASPAFWGRRVRYRSAHSVAEEMLYLRDHY 234 >UniRef50_Q01UE2 Radical SAM domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01UE2_SOLUE Length = 511 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 13/68 (19%) Query: 364 AYGNARIPAYEMIRF-------------SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDS 410 Y R+P EM + S+ + GC CSFCS+ +GR + R + Sbjct: 132 RYDGGRVPGEEMAKARWDLLDPSKYMMASIQTVAGCPENCSFCSVWVTDGRKPRQRLAEK 191 Query: 411 IINEIEAI 418 +I E + Sbjct: 192 VIEEANEL 199 >UniRef50_Q39UZ3 Cobalamin B12-binding/Radical SAM n=3 Tax=Geobacter RepID=Q39UZ3_GEOMG Length = 434 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 71/218 (32%), Gaps = 22/218 (10%) Query: 224 AIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPR 283 + + LP S + P + ED+P + + Sbjct: 18 GWVRRFQLPSLSLKQVAAVTPPEWEVVMADEVHEDVPFGEKFDLVGITAMTHQAVRAYEI 77 Query: 284 PKPW--EKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPA 341 + + V+L + AHA +L E P A+ L R + Sbjct: 78 ADRFRAQGVPVVLGGIHPTVLPEEAQAHADAVLIGEAEPVWAKLLDDFLAGRLAPLYRAP 137 Query: 342 IPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFS--VNIMRGCFGGCSFCSITEHE 399 IP D +P+ R I A + V RGC C FC++T + Sbjct: 138 IPT-----DDRLVIPWSRR--------DILAGRQYLTTQTVQASRGCPYDCPFCTVTPYF 184 Query: 400 GRIIQSRSEDSIINEIEAIRDTVPGFTGVISD--LGGP 435 GR + R+ D ++ E+ + + F + D LG P Sbjct: 185 GRTFRYRNPDDVLAELRSFEGKLMVF---VDDNILGDP 219 >UniRef50_C5BNS4 Radical SAM domain protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNS4_TERTT Length = 488 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 12/87 (13%) Query: 337 INPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC-FGGCSFCS- 394 I PPA PL + +D V + P Y N +P + RGC + C+FCS Sbjct: 196 IAPPAPPL--QNLDDVPFPDFSAFPWECYPNRIVP--------IMTGRGCEWARCTFCSD 245 Query: 395 ITEHEGRIIQSRSEDSIINEIEAIRDT 421 + GR +SRS +++ EI R+ Sbjct: 246 VLTSAGRQYRSRSLANVLAEIRYQREK 272 >UniRef50_Q12Q22 Radical SAM n=1 Tax=Shewanella denitrificans OS217 RepID=Q12Q22_SHEDO Length = 566 Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 32/125 (25%) Query: 311 SRILHHETN------PGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALP---YKRVP 361 R++H N A L+ H V+INP ++ + LP Y ++P Sbjct: 209 FRLIHFIENLQQGRFDIHADGLVGWHDG-DVFINP-----QYTQIQDLNDLPFPAYHKLP 262 Query: 362 HPAYGNARIPAYEMIRFS----------VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSI 411 Y + +P FS + RGC GC+FCS T + +SRS +++ Sbjct: 263 LEKYFHHNVP------FSPYPRGNRVMQIYTSRGCPIGCTFCSSTNFN-KAYRSRSVENV 315 Query: 412 INEIE 416 I EI+ Sbjct: 316 IEEIK 320 >UniRef50_A8F7Y7 Radical SAM domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F7Y7_THELT Length = 439 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 17/125 (13%) Query: 379 SVNIMRGCFGGCSFCSIT---EHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 S+ RGC+G C FCS+ + G+ ++ RS ++++ EI+ ++ +D Sbjct: 183 SMESSRGCYGRCIFCSVVPFFQLSGKKLRFRSVENVVEEIKILKKNHGVKYISFND---- 238 Query: 436 TANMYMLRCKSPRAEQTCRRL--SCVYPDICPHMDTNHEPTINLYRRARDLKGIKKIL-- 491 AN + ++ + + Y C D N E + L + G++K+ Sbjct: 239 -ANFLASKERAFLLAERIIKENLDIRYSIECRADDIN-EDLLRLLKE----SGLRKVFLG 292 Query: 492 IASGV 496 I SGV Sbjct: 293 IESGV 297 >UniRef50_B8CXT9 Radical SAM domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXT9_HALOH Length = 446 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 56/256 (21%) Query: 355 LPYKR--VPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSII 412 +P R + HP Y V RGC C FCS+T+ G + R ++ Sbjct: 144 IPKARHDLFHPGYMFGA----------VQTARGCPMDCEFCSVTQFNGYKYRQRPIKDVL 193 Query: 413 NEIEAIRDTVPGFTGVISD--LG-GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDT 469 +E+E+I + F + D LG G AN ++ + ++ I + Sbjct: 194 DELESIPQKMIFF---VDDNILGHGKNANERAIKLFKGMINRGIKKEWFCQASI--NFAE 248 Query: 470 NHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEE 529 N E + G K + I + ED + + Sbjct: 249 NEEVL-----KYAAKSGCKMVFIG------LEAEDVESL--------------------D 277 Query: 530 GPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKH 589 KM +++K++ D + + ++ FI E + ++ K Sbjct: 278 SVNKKMNIKVGS--NKYKDVIDKINS---YKIAVLGSFIYGLDNDTIESLQRRIEYIIKC 332 Query: 590 RFRLDQVQNFYPSPLA 605 + Q P P Sbjct: 333 PVDVMQTTILTPLPGT 348 >UniRef50_A3MVB8 RNA modification enzyme, MiaB family n=6 Tax=Thermoproteaceae RepID=A3MVB8_PYRCJ Length = 440 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 79/239 (33%), Gaps = 50/239 (20%) Query: 385 GCFGGCSFCSITEHEGR--IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 GC G C+FC+ G ++S D +I ++ + GG +Y+ Sbjct: 124 GCLGNCTFCATKYTRGGAGYVKSADPDEVIRHVKKAVE------------GGAR-EIYLT 170 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA-RDLKGIKKILIASGV----- 496 R S +L R R++ G ++ I Sbjct: 171 GQDVITYGFDARWRS-------------GWTLPDLLERLLREVDGEYRVRIGMSEPWVFE 217 Query: 497 RY-----DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFD 551 R+ DI D + + + +L + + + L M + + D +KEL Sbjct: 218 RFADQILDIVKRD----RRVYRYF---HLPV--QSGSDRVLKAMGR--RYTVDEYKELIR 266 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 + G+ ++ I PG ED + +++ +F V F P P + M Sbjct: 267 KIRRVLGEPVFIATDIIVGFPGEEWEDFLATVKLVEELQFDKVHVARFSPRPFTEAAVM 325 >UniRef50_C6E4U3 Radical SAM domain protein n=3 Tax=Geobacter RepID=C6E4U3_GEOSM Length = 564 Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 V RGC C FCS GR ++ RS +S+++EI ++++ Sbjct: 190 VITSRGCPASCLFCSSPLFWGRGVRFRSPESVVHEIRSLKERY 232 >UniRef50_A0LKA1 Radical SAM domain protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LKA1_SYNFM Length = 512 Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 8/79 (10%) Query: 357 YKRVPHPAYGNARIPAYEMIRF------SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDS 410 Y+ +P+ N IP +++I F S+ RGC C FC I GR+ +++ Sbjct: 140 YEAGSYPSLDNVPIPRWDLIDFKDYASMSIQFSRGCPFDCEFCDIIVLNGRVPRTKPNGQ 199 Query: 411 IINEIEAIRDTVPGFTGVI 429 +I E++A+ D G+ G + Sbjct: 200 VIAELDALYDR--GWRGSV 216 >UniRef50_A5FSG0 Radical SAM domain protein n=5 Tax=Dehalococcoides RepID=A5FSG0_DEHSB Length = 494 Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 92/294 (31%), Gaps = 64/294 (21%) Query: 317 ETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMI 376 E N + L K + V IN P + +D + P+PA+ +P Y I Sbjct: 136 EENYAEIQGLAWKDREGRVIINQPRPFI--HNLDEL--------PNPAWHLIDVPKYWDI 185 Query: 377 RFSVNIMRGCFGGCSFC-SITEHEGRIIQSRSEDSIINEIEAIRDTVP-GFTGVISDLGG 434 ++N RGC CSFC +I H+G S + II +IE ++ F D Sbjct: 186 --TLNTSRGCPFKCSFCYNIPFHQGHR-ADLSVERIIAQIEHLQKNYKVKFIRFFED--- 239 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 + N + + ++ KI + Sbjct: 240 -------------------------------NFTFNRKRMREFCQTV--IERRIKIKWDT 266 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 R D++ ED + + VG I E + L + K D F + Sbjct: 267 ESRADMSEEDVALMAKAGCTSVG----IGVETGSKRMLEYLNK--GVDLDEMGRTFWRFV 320 Query: 555 KQAGKEQYLIP--YFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 K ++P Y + A P ED L + F P P Sbjct: 321 K-----HGIMPRLYIMLAVPTETVEDFTETQDMLHRMEDPPFMYMRFVPYPGTP 369 >UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms RepID=CK5P1_DICDI Length = 607 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFT 426 + V+IMRGC CS+C + GR +SR DSI+ E++ + D GF Sbjct: 254 QVSAYVSIMRGCNNMCSYCIVPFTRGRE-RSRPIDSILREVKDLSDQ--GFK 302 >UniRef50_A5G7J7 Radical SAM domain protein n=5 Tax=Geobacter RepID=A5G7J7_GEOUR Length = 429 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 342 IPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGR 401 M + LP R + ++ ++ RGC C FCS+T GR Sbjct: 130 PVYRPGAMLDMADLPVARR--EIFDRKGY----LLTNTIQTTRGCPFDCEFCSVTAFYGR 183 Query: 402 IIQSRSEDSIINEIEAIRDT 421 + R + ++ E+E +R Sbjct: 184 KYRERPVEQVLAELEILRKN 203 >UniRef50_B8FIB9 Radical SAM domain protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FIB9_DESAA Length = 477 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%) Query: 354 ALPY-KRVP--HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDS 410 ALP+ R H Y + + A M +++ RGC C FC + G ++ RS +S Sbjct: 183 ALPFPARRLLNHRLYRSP-VTARPM--ATISANRGCCHRCVFCPAHKVSGAGVRLRSPES 239 Query: 411 IINEIEAIRDT 421 I+ EI R+ Sbjct: 240 IVREIRECREH 250 >UniRef50_C9RB59 Radical SAM domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RB59_AMMDK Length = 433 Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 +V + RGC GC+FCS+T GR ++R ++ E+ ++++ V F Sbjct: 162 TVQVTRGCPYGCAFCSVTRFFGRTYRTRPIQEVLEEVASLKEKVIIF 208 >UniRef50_C7ILM4 Radical SAM domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7ILM4_9CLOT Length = 441 Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 355 LP-YKRVPHPAYGNARIPAYEMIR-----FS---VNIMRGCFGGCSFCSITEHEGRIIQS 405 LP Y+ V P + IP +++I+ FS + I RGC C +CS H I++ Sbjct: 134 LPKYQAVKRPEISDRPIPRHDLIKDKPGYFSKNLIMISRGCPNRCEYCSSGLHWKGQIKT 193 Query: 406 RSEDSIINEIEAIRDTVP 423 R+ D II EIE + + P Sbjct: 194 RNLDEIIREIELLDPSKP 211 >UniRef50_C6P4U0 Radical SAM domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P4U0_9PROT Length = 446 Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 +V RGC C+FCS+T G + R+ DS+I+EI +I+ Sbjct: 160 TVQTGRGCPINCNFCSVTAFNGSRYRVRNIDSVIDEINSIKSK 202 >UniRef50_UPI0001C420FF magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase BchE n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C420FF Length = 503 Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 11/86 (12%) Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYE-----MIRFSVNIMRGCFGGCSFCSI-TEHEG 400 E++DS LPY + Y N AY MI+ + RGC C+FCS + G Sbjct: 189 EDLDS---LPYVSKVYQKYLNFDDYAYAFAQKPMIQ--IVSSRGCPNQCNFCSYPSTMGG 243 Query: 401 RIIQSRSEDSIINEIEAIRDTVPGFT 426 RI ++RS + +E E I +P Sbjct: 244 RIYRTRSVTDLADEFEYILKELPEIK 269 >UniRef50_A8ZVN3 Radical SAM domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVN3_DESOH Length = 469 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%) Query: 371 PAYEMIRFSVNIMRGCFGGCSFCSITEHE--GRIIQSRSEDSIINEIEAIRD--TVPGFT 426 PA + S+ + RGC C+FC T H GR ++ RS S++ ++ ++ + F Sbjct: 196 PALRGV--SLTVSRGCPFNCTFCQPTVHRTLGRKVRIRSPQSVVADLAYLKGAYRIECF- 252 Query: 427 GVISD 431 +SD Sbjct: 253 -YLSD 256 >UniRef50_B8D4E5 Radical SAM domain protein n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D4E5_DESK1 Length = 521 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 60/177 (33%), Gaps = 60/177 (33%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCF----GGCSFCSITEHEGRIIQSRSEDSIINEIEA 417 HP YG + E RGC GGCSFC H GR + RS II E+EA Sbjct: 182 HPNYGRNLVVEIE-------TYRGCSRWITGGCSFCIEPRH-GRPLM-RSLKGIIEEVEA 232 Query: 418 IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI-- 475 + Y L + R + PDI +M + + Sbjct: 233 L---------------------YRLGVRHIRLGKQ--------PDILAYMARDIGKQVFP 263 Query: 476 --------NLYRRARDL-KG-----IKKILIASGVRYDIAVEDPRYIKELATHHVGG 518 L++ R++ G I + + V Y E R +K + +H G Sbjct: 264 RPDPEVIERLFQGIRNVAPGLITLHIDNVNPGTIVHY--PEESIRILKTIVKYHTPG 318 >UniRef50_Q0W7F7 Predicted Fe-S cluster-binding oxidoreductase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W7F7_UNCMA Length = 481 Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 19/70 (27%) Query: 347 EEMDSVFALPY---KRVP------HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITE 397 E +D LP+ +P HP +P M+ RGC G C+FC++ Sbjct: 178 ENLD---ELPFPDRTLLPQSIDYFHPLVRK--MPYATMM-----TSRGCPGSCNFCTVGR 227 Query: 398 HEGRIIQSRS 407 G+ I+SRS Sbjct: 228 FYGKKIRSRS 237 >UniRef50_D0LTF7 Fe-S oxidoreductase-like protein n=2 Tax=Myxococcales RepID=D0LTF7_HALO1 Length = 668 Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 23/42 (54%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 V IMRGC C FC+ +GR I R+ +SI EIE + Sbjct: 216 VEIMRGCPFRCYFCTEPHVKGRRIDYRNIESITAEIEFLLSH 257 >UniRef50_D1U7N0 Radical SAM domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U7N0_9DELT Length = 504 Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 363 PAYGNARIPAYEMIRF------SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE 416 P +P +E++ F SV RGC C FC I GR + +S D ++ E++ Sbjct: 146 PDLATTPLPLWELLNFKDYVSMSVQYSRGCPFDCEFCGIMALNGRRSRVKSPDQMLREMQ 205 Query: 417 AIRDT 421 ++ D Sbjct: 206 SLYDA 210 >UniRef50_C9S847 THO complex subunit 2 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9S847_VERA1 Length = 2265 Score = 45.0 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 9/142 (6%) Query: 602 SPLANSTTMYYTGKNPLAKIGYKSE-DVFVPKGDKQRRL-----HKALLRYHDPANWPLI 655 +P+ ST NP ++++ + D++R + R+ P Sbjct: 1656 TPVGGSTAAIEPPINPARAALFQNDTPSRTERPDRERSRARDGEQRGAQRHQGPEGPEHD 1715 Query: 656 RQALEAMGKKHLIGSRRDCLVPAPTIEEMRE---ARRQNRNTRPALTKHTPMATQRQTPA 712 R + + + L G R +P ++ RE A R++ R +++ A Sbjct: 1716 RSEIMNLERPVLFGDGRQEPLPRQPRDDPRERDRAPRKDSPARGGRVHPDRLSSDPFRDA 1775 Query: 713 TAKKASSTQSRPVNAGAKKRPK 734 ++ + P +A + P+ Sbjct: 1776 VREEQFGRPTHPTDARNPRNPR 1797 >UniRef50_C6CW91 Radical SAM domain protein n=19 Tax=Bacillales RepID=C6CW91_PAESJ Length = 608 Score = 44.6 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 72/248 (29%), Gaps = 63/248 (25%) Query: 141 TLVYTQRCKEAWKDVPVILGGIEASLRRTAHYD--YWSDTVRRSVLVDSKADMLMFGNGE 198 T+ ++ ++ +ILGG E S YD YW + + S+ D ++ G GE Sbjct: 70 TITVINMLRKIMPEIKIILGGPEVS------YDTEYWMERI-------SEVDFIVVGEGE 116 Query: 199 RPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGED 258 H L E + V A + ++ R P PH + ED Sbjct: 117 ETFH---HLLTEIEGAGKYHMVFGIAYRKQREDRVEILLNPGRPKLDLATLPSPHRFEED 173 Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 +P ++ V + + Q V E+ K D + Sbjct: 174 IPHLGSRVVYFETSRGCPFSCQFCLSSIEVG--VRYFDMERTKADITYLIDS-------- 223 Query: 319 NPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRF 378 L++ + KR A EM +F Sbjct: 224 ----GAKLIKFVDRTFNI---------------------KRDY----------ALEMFKF 248 Query: 379 SVNIMRGC 386 + RGC Sbjct: 249 LIENHRGC 256 >UniRef50_D2LDW7 Radical SAM domain protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LDW7_RHOVA Length = 454 Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYEMIR-FSVNIMRGCFGGCSFCSITEHEGRIIQS 405 E +DS+ Y P Y +R S+ + RGC CSFC++ + GR + Sbjct: 182 ENLDSIPGADYGAFPVERYIEHN-SLLRTVRGISMIVSRGCPYNCSFCAVQQTMGRKWRF 240 Query: 406 RSEDSIINEIEAIRDTVP----GFTGVI 429 +S +++E+ +RD F I Sbjct: 241 KSPAKVVDEVIRLRDDHGIEGVWFKDSI 268 >UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Parachlamydiaceae RepID=MIAB_PARUW Length = 450 Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 99/280 (35%), Gaps = 69/280 (24%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV--ISD 431 + I+ V+I+RGC C++C + G + SR+ ++I+ E + + G I+ Sbjct: 156 DQIKAYVSIIRGCDKFCTYCVVPYTRGSEV-SRAPENILEECRHLVNQ-----GYKEITL 209 Query: 432 LGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKIL 491 LG N Y + C++ H +L + + G++++ Sbjct: 210 LG-QNVNSYGKDKLEWK---------CLF----------H----DLLYQLDKIPGLERVR 245 Query: 492 IASGVRYDIAVEDPRYIKELAT--HHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 + DI+ E I++L T V L+ L KM + Sbjct: 246 FMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAG----SNRVLKKMHR---------IYT 292 Query: 550 FDTYSKQAGKEQYLIPY------FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 + Y ++ + ++P I P +E+ LK+ + + + ++ P Sbjct: 293 VEQYLEKVQMLKEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRK 352 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 + M + VP+ KQ RL + L Sbjct: 353 GTPA--MRWRD--------------DVPEEVKQDRLQRLL 376 >UniRef50_B1I310 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Bacteria RepID=RIMO_DESAP Length = 450 Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 21/176 (11%) Query: 474 TINLYRRARDLKGIKKILI----ASGVRYDIAV---EDPRYIKELATHHVGGYLKIAPEH 526 +L R L+G+ I + SG+ +++ +PR + YL I +H Sbjct: 221 LTDLVSRLAALEGVAWIRLLYCYPSGITFELVELMAREPRLCR---------YLDIPLQH 271 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 + L +M + M R LF S G + F+ PG + D L +L Sbjct: 272 ASDRVLRRMGRSTMSYDLRKLILFLR-SAIPGL--TIRSTFMVGFPGETEADFEELLGFL 328 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKA 642 K + + + M + P + E + + R L++A Sbjct: 329 KAMKLDRAGFFAYSREEGTPAARM--PDQVPPEVKRERLERAAAVQREVSRALNRA 382 >UniRef50_Q6AM43 Related to methyltransferase n=3 Tax=Deltaproteobacteria RepID=Q6AM43_DESPS Length = 455 Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 10/55 (18%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 V RGC GCS+CS EG+ I+ + ++ E++ + I D GG Sbjct: 190 VQTKRGCPYGCSYCSYPTIEGKKIRHYQPEQVVEEVKKL----------IRDFGG 234 >UniRef50_Q8TWF4 2-methylthioadenine synthetase n=1 Tax=Methanopyrus kandleri RepID=Q8TWF4_METKA Length = 423 Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 16/133 (12%) Query: 528 EEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLK 587 ++ L +M + + + E++ + ++ G ++ I PG +E N +L+ Sbjct: 261 DDEVLRRMNR--NYTVEEALEVYRAFERRLGYFSFITD-VIVGFPGETEEAFRNTLRFLE 317 Query: 588 KHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYH 647 + R + F P + M EDV K + R LH+ L + Sbjct: 318 RTRPHILHASRFCRRPGTPAARM----------EDQVPEDV---KLRRSRILHRKRLEWA 364 Query: 648 DPANWPLIRQALE 660 + AN LI + +E Sbjct: 365 EEANRELIGETVE 377 >UniRef50_C5RLU0 Radical SAM domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLU0_CLOCL Length = 274 Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 V RGC G C +CS T G ++RS +S+ EI +++ + G Sbjct: 27 VVTSRGCPGNCIYCSATALSGATYRTRSIESVFMEIVLLKELLKG 71 >UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=MIAB_SORC5 Length = 498 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 71/226 (31%), Gaps = 46/226 (20%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV--ISDLGGPTA 437 V +M+GC CSFC I H + R D I+ EI A+ G ++ LG T Sbjct: 157 VTVMKGCDERCSFC-IVPHTRGPERYRPSDEIVAEIAALVAA-----GTREVTLLG-QTV 209 Query: 438 NMYM-LRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA-RDLKGIKKILIASG 495 N Y PRA D + L RR D+ G+ ++ S Sbjct: 210 NSYRDPLGALPRAPGASAD------------DPDESEFAALLRRVAADVPGLARLRYTS- 256 Query: 496 VRYDIAVEDPRYIK-ELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 PR++ L H L + P H R + Sbjct: 257 -------PHPRHLTPSLVLAH--AELPVLPRHVHMPV----QSGSDRVLRRMIRRYTRAE 303 Query: 555 KQAGKEQYL--IPYF------ISAHPGTRDEDMVNLALWLKKHRFR 592 A + +P I PG ++D +++ F+ Sbjct: 304 YVARTRALVEAVPGLTLSTDIIVGFPGETEDDFAATLSLVREVGFK 349 >UniRef50_A4KVE1 Probable coenzyme B12-binding/radical SAM n=1 Tax=Sinorhizobium meliloti RepID=A4KVE1_RHIME Length = 681 Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV-ISDL 432 V+ RGC C FC T G I+ R+ S+++E++ + F + DL Sbjct: 224 VDSGRGCAFACEFCQTTLLNGTKIRYRTVSSLVDELKVYKQRYGDFEAYFVHDL 277 >UniRef50_C4XKJ3 Cobalamin vitamin B12-binding domain/radical SAM domain protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XKJ3_DESMR Length = 540 Score = 43.5 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Query: 361 PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD 420 P P Y YE + S+ RGC C FC I GR+ + ++ +I E+EAIR Sbjct: 155 PPPRYDLIAPGDYESL--SLQTSRGCPFACEFCDIVSLFGRVPRHKTPTQVIAELEAIRQ 212 Query: 421 TVPGFTGVI 429 GF G + Sbjct: 213 L--GFRGTV 219 >UniRef50_Q9YCV4 Putative uncharacterized protein n=1 Tax=Aeropyrum pernix RepID=Q9YCV4_AERPE Length = 522 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 67/184 (36%), Gaps = 23/184 (12%) Query: 517 GGY--LKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGT 574 GG + IAPE ++KP G L+ + + Y I+ PG Sbjct: 291 GGQRTVTIAPETGSCTIARAILKPIGGD----ITLWAVDNALGQGITGVKLYLITGFPGE 346 Query: 575 RDEDM---VNLALWL-----KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 +ED+ +LAL + K + F P P+ T M + G P + + Sbjct: 347 GEEDLAQTRDLALRVVERVRKAGGVAKASINPFMPKPV---TGMQWAGLAPRRLLEER-- 401 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 + + + R A + +DP W ++ AL G++ +P T R Sbjct: 402 ---INRLSRALRRAGARVSGYDPR-WAEVQVALARGGREMARVVVEWARMPRQTPSSFRA 457 Query: 687 ARRQ 690 A R+ Sbjct: 458 AARR 461 >UniRef50_B3T4U0 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_ANIW137K11 RepID=B3T4U0_9ZZZZ Length = 73 Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 662 MGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQ 721 MG++ LIG+ + LVPA +E + N + RPA P+A+ + A A Sbjct: 1 MGREDLIGNGKKHLVPAWQPILPKEQAKANGSRRPA----KPVASAPRPVGRAPAAGKKN 56 Query: 722 SRPV-NAGAKKR 732 V +G R Sbjct: 57 HVTVQRSGKPAR 68 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q7MJL8 UPF0313 protein VV2143 n=280 Tax=root RepID=Y214... 922 0.0 UniRef50_Q128Y3 Radical SAM n=6 Tax=Bacteria RepID=Q128Y3_POLSJ 878 0.0 UniRef50_A1W831 Radical SAM N-terminal domain protein n=58 Tax=c... 877 0.0 UniRef50_P61405 UPF0313 protein RPA0679 n=29 Tax=Bacteria RepID=... 843 0.0 UniRef50_Q08XF0 Radical SAM n=3 Tax=Bacteria RepID=Q08XF0_STIAU 789 0.0 UniRef50_Q8THA2 UPF0313 protein MA_4618 n=6 Tax=Archaea RepID=Y4... 777 0.0 UniRef50_C9KPY8 Radical SAM domain protein n=1 Tax=Mitsuokella m... 726 0.0 UniRef50_A7H6E2 Radical SAM domain protein n=4 Tax=Anaeromyxobac... 720 0.0 UniRef50_D2QYA0 Radical SAM domain protein n=1 Tax=Pirellula sta... 713 0.0 UniRef50_B5YAS7 Radical SAM n=2 Tax=Dictyoglomus RepID=B5YAS7_DICT6 706 0.0 UniRef50_Q7MVU9 UPF0313 protein PG_0934 n=25 Tax=Bacteria RepID=... 705 0.0 UniRef50_B8DSG7 Radical SAM domain protein n=1 Tax=Desulfovibrio... 690 0.0 UniRef50_D1N9W5 Radical SAM domain protein n=1 Tax=Victivallis v... 672 0.0 UniRef50_C7LQA1 Radical SAM domain protein n=1 Tax=Desulfomicrob... 669 0.0 UniRef50_B8J3X2 Radical SAM domain protein n=1 Tax=Desulfovibrio... 660 0.0 UniRef50_D1P9M1 Radical SAM domain protein n=1 Tax=Prevotella co... 655 0.0 UniRef50_C9RQ46 Radical SAM domain protein n=28 Tax=Bacteria Rep... 646 0.0 UniRef50_C9MQP2 Radical SAM domain protein n=4 Tax=Prevotella Re... 644 0.0 UniRef50_A9KIV0 Radical SAM domain protein n=5 Tax=Clostridiales... 634 e-180 UniRef50_B0VIP9 Radical SAM domain protein n=1 Tax=Candidatus Cl... 616 e-175 UniRef50_Q8R682 UPF0313 protein FN0734 n=26 Tax=Bacteria RepID=Y... 608 e-172 UniRef50_C7N5G2 Fe-S oxidoreductase n=54 Tax=cellular organisms ... 605 e-171 UniRef50_C8QZ53 Radical SAM domain protein n=5 Tax=Deltaproteoba... 604 e-171 UniRef50_A7IB47 Radical SAM N-terminal domain protein n=7 Tax=ce... 597 e-169 UniRef50_A5IK80 UPF0313 protein Tpet_0582 n=10 Tax=Thermotogacea... 596 e-169 UniRef50_A1ALG7 UPF0313 protein Ppro_0556 n=9 Tax=Desulfuromonad... 584 e-165 UniRef50_P61404 UPF0313 protein GSU2873 n=8 Tax=Proteobacteria R... 576 e-162 UniRef50_Q729D8 Radical SAM domain protein n=12 Tax=Proteobacter... 574 e-162 UniRef50_Q58555 UPF0313 protein MJ1155 n=4 Tax=Methanocaldococcu... 567 e-160 UniRef50_Q0STL9 UPF0313 protein CPR_1216 n=60 Tax=cellular organ... 505 e-141 UniRef50_D1J9C3 Putative uncharacterized protein n=1 Tax=uncultu... 426 e-117 UniRef50_B0TIH7 Radical sam protein, putative n=1 Tax=Heliobacte... 418 e-115 UniRef50_D1TTB0 Conserved domain protein n=10 Tax=Yersinia RepID... 233 1e-59 UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransfer... 222 3e-56 UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Aci... 211 5e-53 UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 205 5e-51 UniRef50_C6M658 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 203 1e-50 UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO... 202 4e-50 UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 ... 202 5e-50 UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=C... 199 3e-49 UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 198 9e-49 UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bactero... 197 1e-48 UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 195 5e-48 UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 191 6e-47 UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO... 191 1e-46 UniRef50_C2KX45 2-methylthioadenine synthase n=2 Tax=Lachnospira... 191 1e-46 UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 190 2e-46 UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bac... 190 3e-46 UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 186 2e-45 UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicu... 186 3e-45 UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransfer... 185 5e-45 UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 185 5e-45 UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=... 185 6e-45 UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransfer... 185 7e-45 UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransfer... 183 2e-44 UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO... 183 3e-44 UniRef50_B8GFG5 Radical SAM domain protein n=1 Tax=Methanosphaer... 182 5e-44 UniRef50_Q0RDV0 Ribosomal protein S12 methylthiotransferase rimO... 180 2e-43 UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dic... 178 5e-43 UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Cal... 178 7e-43 UniRef50_B4S6S9 Radical SAM domain protein n=1 Tax=Prosthecochlo... 178 8e-43 UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bact... 178 9e-43 UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mit... 177 2e-42 UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO... 177 2e-42 UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sph... 176 2e-42 UniRef50_Q0W344 Putative 2-methylthioadenine synthetase n=1 Tax=... 176 3e-42 UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genom... 175 6e-42 UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotran... 175 6e-42 UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Vic... 174 9e-42 UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransfer... 173 2e-41 UniRef50_Q8TX78 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyr... 172 4e-41 UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO... 172 4e-41 UniRef50_Q3XWG2 Putative uncharacterized protein n=1 Tax=Enteroc... 172 6e-41 UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransfer... 171 6e-41 UniRef50_A7H5G3 Ribosomal protein S12 methylthiotransferase rimO... 170 1e-40 UniRef50_Q9WZT7 Putative methylthiotransferase TM_0830 n=6 Tax=T... 169 4e-40 UniRef50_Q2SXQ0 Radical SAM domain protein n=83 Tax=Bacteria Rep... 169 5e-40 UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase... 168 7e-40 UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransfer... 168 8e-40 UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoni... 167 2e-39 UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO... 166 3e-39 UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collins... 165 6e-39 UniRef50_C5CDI9 MiaB-like tRNA modifying enzyme n=1 Tax=Kosmotog... 164 1e-38 UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO... 164 1e-38 UniRef50_Q58275 Putative methylthiotransferase MJ0865 n=11 Tax=M... 163 3e-38 UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 163 3e-38 UniRef50_A0LV11 Ribosomal protein S12 methylthiotransferase rimO... 161 7e-38 UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO... 160 1e-37 UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO... 160 2e-37 UniRef50_D0RQJ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 159 2e-37 UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmati... 159 3e-37 UniRef50_A6LBP0 Fe-S oxidoreductase n=4 Tax=Bacteroidales RepID=... 159 4e-37 UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=... 159 5e-37 UniRef50_D2AXY5 RNA modification enzyme, MiaB-family n=1 Tax=Str... 157 1e-36 UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO... 156 3e-36 Sequences not found previously or not previously below threshold: UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 203 2e-50 UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax... 196 2e-48 UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransfer... 193 3e-47 UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bactero... 187 1e-45 UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 187 1e-45 UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransfer... 186 2e-45 UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 185 4e-45 UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransfer... 184 1e-44 UniRef50_A1APR6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 183 2e-44 UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2... 182 4e-44 UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Cht... 182 5e-44 UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax... 181 6e-44 UniRef50_B4JIJ9 GH19109 n=4 Tax=cellular organisms RepID=B4JIJ9_... 181 7e-44 UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 181 8e-44 UniRef50_Q29AM2 GA19527 n=9 Tax=Bilateria RepID=Q29AM2_DROPS 181 8e-44 UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 181 8e-44 UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 181 1e-43 UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 180 1e-43 UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 180 2e-43 UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Vic... 180 2e-43 UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 180 3e-43 UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fu... 179 3e-43 UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Breviba... 179 4e-43 UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 178 5e-43 UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostri... 178 6e-43 UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 178 6e-43 UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candida... 178 9e-43 UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Syn... 178 9e-43 UniRef50_C7RHT5 RNA modification enzyme, MiaB family n=3 Tax=Ana... 177 1e-42 UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO... 177 1e-42 UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 176 2e-42 UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 176 2e-42 UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 176 2e-42 UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotro... 176 3e-42 UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=... 176 4e-42 UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransfer... 175 6e-42 UniRef50_B5EE49 (Dimethylallyl)adenosine tRNA methylthiotransfer... 175 7e-42 UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO... 175 8e-42 UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransfer... 175 9e-42 UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 174 1e-41 UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax... 174 1e-41 UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO... 174 1e-41 UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bac... 173 2e-41 UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 173 2e-41 UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae Rep... 173 2e-41 UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 173 3e-41 UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiot... 173 3e-41 UniRef50_B6GBU3 Putative uncharacterized protein n=2 Tax=Collins... 172 4e-41 UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisp... 172 5e-41 UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 172 6e-41 UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO... 171 7e-41 UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halother... 171 7e-41 UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax... 171 7e-41 UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 171 8e-41 UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmati... 171 9e-41 UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransfer... 170 1e-40 UniRef50_A4EC90 Putative uncharacterized protein n=1 Tax=Collins... 170 1e-40 UniRef50_B3ES11 (Dimethylallyl)adenosine tRNA methylthiotransfer... 170 1e-40 UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 170 2e-40 UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 170 2e-40 UniRef50_Q057G5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 170 2e-40 UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicute... 169 2e-40 UniRef50_UPI00006CFA0B RNA modification enzyme, MiaB family n=1 ... 169 3e-40 UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostri... 169 3e-40 UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 169 3e-40 UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO... 169 3e-40 UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Seb... 169 3e-40 UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Ato... 169 4e-40 UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavo... 169 5e-40 UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 169 5e-40 UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eub... 169 5e-40 UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 ... 168 5e-40 UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2... 168 5e-40 UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransfer... 168 5e-40 UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO... 168 7e-40 UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fu... 168 7e-40 UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransfer... 168 8e-40 UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxyd... 168 8e-40 UniRef50_D2L881 RNA modification enzyme, MiaB family n=1 Tax=Des... 168 9e-40 UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransfer... 167 1e-39 UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 167 1e-39 UniRef50_B5W2N4 RNA modification enzyme, MiaB family n=5 Tax=Cya... 167 2e-39 UniRef50_D2V442 Predicted protein (Fragment) n=1 Tax=Naegleria g... 167 2e-39 UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransfer... 167 2e-39 UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 167 2e-39 UniRef50_D1H8D6 Whole genome shotgun sequence of line PN40024, s... 166 2e-39 UniRef50_D2QJ28 RNA modification enzyme, MiaB family n=1 Tax=Spi... 166 2e-39 UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransfer... 166 3e-39 UniRef50_B2A1N3 RNA modification enzyme, MiaB family n=1 Tax=Nat... 166 3e-39 UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rho... 166 3e-39 UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Ca... 165 5e-39 UniRef50_Q09316 CDK5RAP1-like protein n=5 Tax=Bilateria RepID=CK... 165 5e-39 UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Des... 165 5e-39 UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransfer... 165 6e-39 UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIH... 165 6e-39 UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pir... 165 6e-39 UniRef50_UPI000180B378 PREDICTED: similar to CDK5 regulatory sub... 165 6e-39 UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO... 165 7e-39 UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=... 164 8e-39 UniRef50_Q1AW39 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 164 1e-38 UniRef50_Q96SZ6 CDK5 regulatory subunit-associated protein 1 n=3... 164 1e-38 UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO... 164 1e-38 UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO... 163 2e-38 UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Vei... 163 2e-38 UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 163 2e-38 UniRef50_A6LKT7 MiaB-like tRNA modifying enzyme n=3 Tax=Thermoto... 163 3e-38 UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransfer... 163 3e-38 UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerof... 163 3e-38 UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO... 163 3e-38 UniRef50_D0NCV9 CDK5 regulatory subunit-associated protein 1 n=1... 163 3e-38 UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pir... 162 4e-38 UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Des... 162 4e-38 UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobi... 162 4e-38 UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostri... 162 4e-38 UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 162 6e-38 UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms... 161 6e-38 UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Ta... 161 7e-38 UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clo... 161 7e-38 UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO... 161 9e-38 UniRef50_Q2J750 Ribosomal protein S12 methylthiotransferase rimO... 161 1e-37 UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransfer... 161 1e-37 UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Ba... 161 1e-37 UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdema... 160 1e-37 UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO... 160 2e-37 UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO... 160 2e-37 UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO... 160 2e-37 UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclass... 160 2e-37 UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=... 160 2e-37 UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisp... 160 2e-37 UniRef50_C1SNN4 SSU ribosomal protein S12P methylthiotransferase... 159 2e-37 UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO... 159 3e-37 UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO... 159 3e-37 UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillone... 159 3e-37 UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax... 159 4e-37 UniRef50_C0R0S3 MiaB, 2-methylthioadenine synthetase n=2 Tax=Bra... 159 5e-37 UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fib... 158 5e-37 UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Cor... 158 6e-37 UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Aci... 158 7e-37 UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO... 158 7e-37 UniRef50_A4SAH0 Predicted protein n=3 Tax=Mamiellales RepID=A4SA... 158 7e-37 UniRef50_A2SQZ8 MiaB-like tRNA modifying enzyme n=1 Tax=Methanoc... 157 1e-36 UniRef50_Q3ZYS0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 157 1e-36 UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransfer... 157 1e-36 UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO... 157 2e-36 UniRef50_B8E0G0 MiaB-like tRNA modifying enzyme n=2 Tax=Dictyogl... 157 2e-36 UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Sub... 156 2e-36 UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransfer... 156 2e-36 UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Rum... 156 2e-36 UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mi... 156 2e-36 UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax... 156 3e-36 UniRef50_D0J9M2 RNA modification protein n=1 Tax=Blattabacterium... 156 4e-36 UniRef50_A8F640 MiaB-like tRNA modifying enzyme n=1 Tax=Thermoto... 156 4e-36 UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransfer... 155 5e-36 UniRef50_O66772 Putative methylthiotransferase aq_474 n=3 Tax=Aq... 155 5e-36 UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO... 155 5e-36 >UniRef50_Q7MJL8 UPF0313 protein VV2143 n=280 Tax=root RepID=Y2143_VIBVY Length = 768 Score = 922 bits (2383), Expect = 0.0, Method: Composition-based stats. Identities = 474/733 (64%), Positives = 566/733 (77%), Gaps = 11/733 (1%) Query: 12 DLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLE 71 + + +YWA CFG APFLP SR+EMD LGWDSCDI+LVTGDAYVDHPSFGMAI GR+LE Sbjct: 7 PIHTHKKYWAECFGTAPFLPTSRKEMDALGWDSCDIVLVTGDAYVDHPSFGMAIIGRLLE 66 Query: 72 AQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDN 131 AQGFRVGIIAQP W K DFM LGKPNLFFGVT+GNMDSMINRYT+DR+LRHDDAYTP+N Sbjct: 67 AQGFRVGIIAQPQWQDKTDFMSLGKPNLFFGVTSGNMDSMINRYTSDRKLRHDDAYTPNN 126 Query: 132 VAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADM 191 GKRPDRATLVY+QRC+EA+KDVP++LGGIEASLRR AHYDYWSD VRRSVL+D+KAD+ Sbjct: 127 EGGKRPDRATLVYSQRCREAYKDVPIVLGGIEASLRRVAHYDYWSDKVRRSVLLDAKADI 186 Query: 192 LMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPI 251 L+FGN ER LVEVAHRLA GE I+++ ++R TA+ + G++ +DS+R++ P K I Sbjct: 187 LLFGNAERALVEVAHRLAEGEEIAQMTNIRGTAVNLAAEPEGYTIIDSSRIEKPRKEAFI 246 Query: 252 PHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHAS 311 P E + K PK Q P T V LPSFEK++ D++LYAHAS Sbjct: 247 PPNPYEVETQCETKSEEPKAQ----PITIRPSRHDAATTAVRLPSFEKLQNDRILYAHAS 302 Query: 312 RILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIP 371 RILH ETNP RAL+Q+HG+R +W+N IPL+TEEMD VF LPY RVPHP YG A+IP Sbjct: 303 RILHLETNPYSGRALIQRHGNRELWVNQAPIPLTTEEMDYVFGLPYARVPHPKYGKAKIP 362 Query: 372 AYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISD 431 AY+MI+ SVNIMRGCFGGCSFCSITEHEGRIIQ+RS++SI+ E+E IRD VPGFTG ISD Sbjct: 363 AYDMIKTSVNIMRGCFGGCSFCSITEHEGRIIQNRSQESILTELEEIRDKVPGFTGTISD 422 Query: 432 LGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKIL 491 LGGPTANMY L C P+AE CRR SCV+P IC ++T+H+ TI+LYR AR +KG+KK++ Sbjct: 423 LGGPTANMYRLGCSDPKAEANCRRPSCVFPGICNKLNTDHKHTIDLYRAARQVKGVKKVM 482 Query: 492 IASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFD 551 IASGVRYD+A+E P Y+KEL THHVGGYLKIAPEHTE+GPL MMKPGMG+YDRFKE+FD Sbjct: 483 IASGVRYDLAIESPEYVKELVTHHVGGYLKIAPEHTEKGPLDLMMKPGMGTYDRFKEMFD 542 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 YS++AGK+QYLIPYFISAHPGT DEDM+NLALWLKK+ + DQVQNFYPSP+ N+T+MY Sbjct: 543 KYSQEAGKKQYLIPYFISAHPGTTDEDMLNLALWLKKNNYECDQVQNFYPSPMCNATSMY 602 Query: 612 YTGKNPLAKIGYKS-EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 Y+ NPL ++ YK EDV V KGD+QRRLHKALLRYHDPANWPLIR+AL MGKK+LIG Sbjct: 603 YSETNPLKRVKYKQREDVPVAKGDRQRRLHKALLRYHDPANWPLIREALITMGKKYLIGD 662 Query: 671 RRDCLVPAPTIEEMREARRQNRNTRPALTKHTP-MATQRQTPATAKKASSTQSRPVNAGA 729 + CLVPA ++ A+R+ A T +TQ P A S + +P G Sbjct: 663 KPGCLVPAEDVDARTPAQRRKSGRHGANRFATKHTSTQPGFPGDKANAGSGK-KPTRGGQ 721 Query: 730 ----KKRPKAAVG 738 R +A G Sbjct: 722 SNSAPSRSGSATG 734 >UniRef50_Q128Y3 Radical SAM n=6 Tax=Bacteria RepID=Q128Y3_POLSJ Length = 831 Score = 878 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 461/820 (56%), Positives = 559/820 (68%), Gaps = 98/820 (11%) Query: 8 QPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICG 67 + + L S+ +YWAA FG A FLP SR EM+ LGWDSCDII+VTGDAYVDHPSFGMA+ G Sbjct: 12 RAAKPLTSYRKYWAARFGTAKFLPTSRAEMEALGWDSCDIIIVTGDAYVDHPSFGMAVIG 71 Query: 68 RMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAY 127 RMLEAQGFRVGIIAQP+W S D F LGKPNLFFGVTAGNMDSMINRYTAD ++R DDAY Sbjct: 72 RMLEAQGFRVGIIAQPEWQSADPFRVLGKPNLFFGVTAGNMDSMINRYTADHKIRSDDAY 131 Query: 128 TPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDS 187 TP +V GKRPDRA LVY+QRCKEA+KDVP+ILGGIE SLRR AHYDYWSD VRRS++VDS Sbjct: 132 TPGDVGGKRPDRAALVYSQRCKEAYKDVPIILGGIEGSLRRIAHYDYWSDKVRRSIVVDS 191 Query: 188 KADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVK---EALPGWSGVDSTRLDT 244 K D+L++GN ER +VE+AHRLA EP++ + D+R TA I + E GW +DST +DT Sbjct: 192 KCDLLLYGNAERAIVEIAHRLAAREPVATMTDIRGTAFIRRSGDETAQGWFEIDSTNVDT 251 Query: 245 PGKIDPIPHPY----------------------------------------GEDLPCADN 264 PG+++ +PY G Sbjct: 252 PGRVEAHVNPYLMISEQAKEQGATCAREDEAADVAAQAEKDAALLPRPQGEGRGEGATKP 311 Query: 265 KPVAPKKQEAKAVTVQPPRP-----------------------------------KPWEK 289 VA + A P P P ++ Sbjct: 312 LQVASDARTAFKANAGSPHPDPLPGGEGIKANPAIKPLTFVPNPSLSHMQGKIKVPPRDR 371 Query: 290 TYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGD----RYVWINPPAIPLS 345 + + LPS+E+VK D VLYAHA+R+LH ETNPG ARAL+Q HG+ R VWINPP IPL+ Sbjct: 372 SVIRLPSYEQVKSDPVLYAHANRVLHLETNPGNARALVQAHGEGATARDVWINPPPIPLT 431 Query: 346 TEEMDSVFALPYKRVPHPAYGNA--------RIPAYEMIRFSVNIMRGCFGGCSFCSITE 397 T EMD VF LPY R PHP Y + +IPA+EMIRFSVNIMRGCFGGC+FCSITE Sbjct: 432 TAEMDYVFDLPYARSPHPIYADENGSHDHATKIPAWEMIRFSVNIMRGCFGGCTFCSITE 491 Query: 398 HEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLS 457 HEGRIIQSRSEDS+I EIEAIRDTV GFTG ISDLGGPTANMY + CKSP E CR+ S Sbjct: 492 HEGRIIQSRSEDSVIREIEAIRDTVKGFTGAISDLGGPTANMYRIGCKSPEIEAACRKPS 551 Query: 458 CVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVG 517 CVYP IC +++TNH P I +YRRAR LKG+KKILI+SG+RYD+AV+ P Y+KEL THHVG Sbjct: 552 CVYPGICSNLNTNHNPLIKMYRRARALKGVKKILISSGLRYDLAVQSPEYVKELVTHHVG 611 Query: 518 GYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDE 577 GYLKIAPEHTE+GPL+KMMKPG+GSYD+FK++F+ YS +AGK+Q+LIPYFI+AHPGT DE Sbjct: 612 GYLKIAPEHTEQGPLTKMMKPGIGSYDKFKQMFEKYSLEAGKKQFLIPYFIAAHPGTSDE 671 Query: 578 DMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQR 637 DM+NLA+WLKK+ FR DQVQ FYPSP+A +T MY+T KNPL KI SE V + +G+++R Sbjct: 672 DMMNLAIWLKKNGFRADQVQTFYPSPMATATAMYHTNKNPLRKITRDSETVDIVRGERRR 731 Query: 638 RLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PTIEEMREARRQNRNTR 695 RLHKA LRYHDP NWP++R+AL+AMG+ LIG+ + L+P P + ++ R+ +T Sbjct: 732 RLHKAFLRYHDPNNWPVLREALKAMGRADLIGNGKHHLIPTFQPLTDGSYQSARRKNSTT 791 Query: 696 PALTKHTPMATQ------RQTPATAKKASSTQSRPVNAGA 729 L TP+ + P PV Sbjct: 792 VVLKTPTPVKGRILTQHTGLPPRDNGSGKPGGKPPVRKAR 831 >UniRef50_A1W831 Radical SAM N-terminal domain protein n=58 Tax=cellular organisms RepID=A1W831_ACISJ Length = 847 Score = 877 bits (2266), Expect = 0.0, Method: Composition-based stats. Identities = 450/783 (57%), Positives = 561/783 (71%), Gaps = 55/783 (7%) Query: 10 DRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRM 69 + L S+ YWA FG AP+LPMSR EM+QLGWDSCD++LVTGDAYVDHPSFGMA+ GR+ Sbjct: 14 AKPLTSYRPYWAKRFGVAPYLPMSRAEMEQLGWDSCDVVLVTGDAYVDHPSFGMAVIGRV 73 Query: 70 LEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTP 129 LEAQGFRVGIIAQPDW S D F LGKPNLF+GVTAGNMDSMINRYTADR++R DDAYTP Sbjct: 74 LEAQGFRVGIIAQPDWQSADAFKVLGKPNLFWGVTAGNMDSMINRYTADRKIRSDDAYTP 133 Query: 130 DNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKA 189 +V GKRPDRA +VY+QRC+EA+KDVP++LGGIE SLRR AHYDYWSD VRRS++VDSK Sbjct: 134 GDVGGKRPDRAAVVYSQRCREAYKDVPIVLGGIEGSLRRIAHYDYWSDKVRRSIVVDSKC 193 Query: 190 DMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKID 249 D+L+FGN ER LVEVAHR+A +P+ I DVR TA + + + PGW +DST +D PG++D Sbjct: 194 DILLFGNAERALVEVAHRIARRDPVETITDVRGTAFVRRASEPGWFEIDSTEVDEPGRVD 253 Query: 250 PIPHPY--------GEDLPCADNKPVAP-------------KKQEAKAVTVQPPRP---- 284 + +PY + C+ K + + P P Sbjct: 254 ELINPYMTTSEQAAAQGQTCSQEDAANSIAASADPQSAAGQKPLQTVQIVPNPALPSKGR 313 Query: 285 -----KPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGD----RYV 335 P E+T + LPS+E+VK D VLYAHA+R+LH ETNPG ARAL+Q HG+ R V Sbjct: 314 SGRALPPRERTVIRLPSYEQVKADPVLYAHANRVLHLETNPGNARALVQAHGEGATARDV 373 Query: 336 WINPPAIPLSTEEMDSVFALPYKRVPHPAYGNA--------RIPAYEMIRFSVNIMRGCF 387 W+NPP +PL+T EMD VF LPY R PHP Y +A +IPA+EMIR S+NIMRGCF Sbjct: 374 WLNPPPVPLTTAEMDWVFGLPYARNPHPQYLDAQGSYEGPTKIPAWEMIRASINIMRGCF 433 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGC+FCSITEHEGRIIQSRSEDSII E+E IRD V GFTG ISDLGGPTANMY L CKSP Sbjct: 434 GGCTFCSITEHEGRIIQSRSEDSIIAEVEDIRDKVKGFTGTISDLGGPTANMYRLGCKSP 493 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 E CR+ SCV+P IC ++ T+H P +N+YRRAR L GIKKILI SG+RYD+AV+ P Y Sbjct: 494 EIEAACRKPSCVFPGICQNLHTDHAPLVNIYRRARKLPGIKKILIGSGLRYDLAVKSPEY 553 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 +KEL HHVGGYLKIAPEHTE GPLSKMMKPG+G+YDRFK++F+ Y+++AGK+Q+LIPYF Sbjct: 554 VKELVQHHVGGYLKIAPEHTEAGPLSKMMKPGIGNYDRFKQMFEQYTEEAGKKQFLIPYF 613 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKS-- 625 I+AHPGT DEDM+NLA+WLKK+ FR DQVQ FYPSP+A++T MY++G+NPL ++ + Sbjct: 614 IAAHPGTTDEDMLNLAIWLKKNGFRADQVQAFYPSPMASATAMYHSGRNPLTRVRRQMRD 673 Query: 626 ---EDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PT 680 E V V +G+K+RRLHKA LRYHDP NWPL+R+AL++MG+ LIG+ + L+P P Sbjct: 674 VAEEQVDVVRGEKRRRLHKAFLRYHDPNNWPLLREALKSMGRADLIGNGKHHLIPTFQPL 733 Query: 681 IEEMREARRQNRNT----RPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAA 736 ++ ++ R+ +T A +T + + + + P Sbjct: 734 VDGSYQSARKKNSTGPKGGGAGVGYTINKDGKAVALRRRPQELEEPQGDVRFRSSAP--Q 791 Query: 737 VGR 739 GR Sbjct: 792 PGR 794 >UniRef50_P61405 UPF0313 protein RPA0679 n=29 Tax=Bacteria RepID=Y679_RHOPA Length = 677 Score = 843 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 426/700 (60%), Positives = 518/700 (74%), Gaps = 36/700 (5%) Query: 12 DLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLE 71 L S + AA PAPFLPMSR EMD+LGWD+CDI+LVTGDAYVDHPSFGMAI GR+LE Sbjct: 10 PLMSRFRPSAAPRKPAPFLPMSRAEMDKLGWDACDIVLVTGDAYVDHPSFGMAIIGRLLE 69 Query: 72 AQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDN 131 +QGFRVGII+QPDW S + F LGKP +FFGVT GNMDSM+NRYTADRRLRHDDAYTP+ Sbjct: 70 SQGFRVGIISQPDWQSAEPFKALGKPRVFFGVTGGNMDSMVNRYTADRRLRHDDAYTPNG 129 Query: 132 VAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADM 191 GKRPDR TLVY QRC+EA+KDVP+ILGGIEASLRR AHYDYWSD VRRSVL D+KAD+ Sbjct: 130 EGGKRPDRCTLVYAQRCREAFKDVPIILGGIEASLRRIAHYDYWSDKVRRSVLADAKADL 189 Query: 192 LMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPI 251 L++GN ER ++EVAHRLA GE E+ D+R A+ + + Sbjct: 190 LLYGNAERAVIEVAHRLAAGEAPRELEDIRGVALFRRV------------------PENT 231 Query: 252 PHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHAS 311 + +DL AD + + LPS E+V+ DK YA AS Sbjct: 232 IELHADDLDAADEGARQVRG-----------------DVVIRLPSCEQVEQDKEAYARAS 274 Query: 312 RILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIP 371 R+LH E+NPG AR L+Q+HGDR +W+NPP IPL+TEEMDSV+ LPY R PHP+YGNA+IP Sbjct: 275 RVLHRESNPGNARPLVQRHGDRDLWLNPPPIPLTTEEMDSVYDLPYARAPHPSYGNAKIP 334 Query: 372 AYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISD 431 A++MI+ SV IMRGCFGGC+FCSITEHEGRIIQSRSE SI+ EIE IRD PGFTGVISD Sbjct: 335 AWDMIKTSVTIMRGCFGGCTFCSITEHEGRIIQSRSEASILQEIEKIRDKTPGFTGVISD 394 Query: 432 LGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKIL 491 +GGPTANMY + CK E +CR+ SCV+PDICP+++T+H+ I LYR+ R++KGIK+++ Sbjct: 395 IGGPTANMYRMACKDSNIESSCRKPSCVFPDICPNLNTSHDDLIRLYRKVREVKGIKRVM 454 Query: 492 IASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFD 551 +ASGVRYD+AV+ P YIKEL +HHVGGYLKIAPEHTE GPL KMMKPG+G+Y RFK++F+ Sbjct: 455 VASGVRYDLAVKSPAYIKELVSHHVGGYLKIAPEHTERGPLDKMMKPGIGTYHRFKQMFE 514 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 +KQAGK+ YLIPYFI+AHPGT DEDM+NLALWLK++R+R DQVQ F PSP+A +T MY Sbjct: 515 AAAKQAGKQYYLIPYFIAAHPGTTDEDMMNLALWLKRNRYRADQVQTFLPSPMATATAMY 574 Query: 612 YTGKNPLAKIGY-KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 ++G NPL + + SE V KG +QRRLHKA LRYHDP NWP++R+AL+AMG+ LIGS Sbjct: 575 HSGVNPLRGVRHGASEPVEAIKGLRQRRLHKAFLRYHDPDNWPVLREALKAMGRADLIGS 634 Query: 671 RRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQT 710 R D LVPA +A R R K T+ Sbjct: 635 RPDQLVPAHQPPGTGKAAGTRRPVRGDGPKPQRFTTKGVR 674 >UniRef50_Q08XF0 Radical SAM n=3 Tax=Bacteria RepID=Q08XF0_STIAU Length = 636 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 342/663 (51%), Positives = 443/663 (66%), Gaps = 57/663 (8%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 PFLP +R +M+ GW+ DII+V+GDAYVDHP+FG + R LE +GF+VG+IAQPDW S Sbjct: 10 PFLPTTRADMEARGWEQLDIIIVSGDAYVDHPAFGPVLIARFLEGRGFKVGLIAQPDWHS 69 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 + F LGKP LFFGV AGN+DSM+NR TA ++ R +D Y+P RPDRAT+VY QR Sbjct: 70 AEPFKVLGKPRLFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGRTNCRPDRATIVYGQR 129 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 C+EA+ DVP+ILGGIEASLRR AHYDYWSD +RRS+L D+KAD+L+FG GERP+ EVA R Sbjct: 130 CREAYPDVPIILGGIEASLRRIAHYDYWSDKLRRSILFDAKADLLIFGMGERPVWEVADR 189 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 + GE I +IRDVR TA ++ +A D Sbjct: 190 MNRGESIEQIRDVRGTAYLINDAEMKRHEAD----------------------------- 220 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 P + ++ V+LPSFE+V DK +A +R ETNPG AR L Sbjct: 221 --------------PAKRAADRKTVVLPSFEEVLADKSAFAVMTRDFQMETNPGNARPLA 266 Query: 328 QKHGDRYVWINPPAIPLSTE--------EMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 Q+HG+R +++NPPA+PL MD ++ LP+ RVPHP Y N IPAYE ++ S Sbjct: 267 QRHGNRAIFMNPPALPLEDGVGSGADAVAMDEMYDLPFNRVPHPMYKNEGIPAYETVKHS 326 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 V +MRGCFGGC+FCSITEHEGR+IQSRS +S++ E+ A+R + F G I+DLGGPTANM Sbjct: 327 VVLMRGCFGGCTFCSITEHEGRVIQSRSAESVLREVRALR-RMGDFRGTITDLGGPTANM 385 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y L+CKS E+ CR+LSCV+P +C ++ T+H P I+L R R +GIK + IASGVRYD Sbjct: 386 YKLKCKSEDIEKKCRKLSCVHPGVCENLQTDHGPLIDLMREVRQEEGIKHVFIASGVRYD 445 Query: 500 IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 +A P Y+KELA HHVGG L +APEH L KM KPG+ S++RF+ +F S++AGK Sbjct: 446 LAERSPEYVKELAAHHVGGQLSVAPEHVSPRVLEKMKKPGIESFERFQTMFACASEEAGK 505 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQY IPYFIS HPG+ EDMV+LALWLKK+ R QVQ+F P+P+A +TTMYYTG +PL Sbjct: 506 EQYDIPYFISGHPGSTLEDMVDLALWLKKNGKRPRQVQDFIPTPMAVATTMYYTGIDPL- 564 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 K E V+ +G +++RL KALL Y +P +WP+ R+ALE G+K LIG LVP Sbjct: 565 ----KMEPVYTARGLREKRLQKALLLYWNPEHWPMAREALELAGRKDLIGRGPSALVPPE 620 Query: 680 TIE 682 + Sbjct: 621 SAG 623 >UniRef50_Q8THA2 UPF0313 protein MA_4618 n=6 Tax=Archaea RepID=Y4618_METAC Length = 742 Score = 777 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 279/658 (42%), Positives = 396/658 (60%), Gaps = 37/658 (5%) Query: 24 FGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQP 83 + FLPMS EE+ GW DIILVTGDAYVDH SFG AI GR+LE GFRVGIIAQP Sbjct: 121 LPASKFLPMSPEEVKARGWKELDIILVTGDAYVDHSSFGTAIIGRVLEDAGFRVGIIAQP 180 Query: 84 DWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLV 143 W + +D +LG+P LFF V+AGN DSM++ T + R DAY+P N G RP+R+ ++ Sbjct: 181 RWDNPEDLKKLGRPRLFFSVSAGNTDSMVSNLTPGLKPRKKDAYSPGNKTGLRPNRSVII 240 Query: 144 YTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVE 203 Y+ R KEA+ +VP++LGGIEASLRR AHYDY SD VR+++L D+ AD++++G GE +VE Sbjct: 241 YSNRIKEAFPNVPIVLGGIEASLRRFAHYDYLSDKVRQAILADAPADLVVYGMGELQIVE 300 Query: 204 VAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCAD 263 +A RL GE I +IRD+ T ++ Sbjct: 301 IAKRLQAGEDIRKIRDIPGTVWK------------------------------MEVRAWK 330 Query: 264 NKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCA 323 K P + K Y+ +PSF +V DK +A A R E NP Sbjct: 331 ELKEKGKGTNEAVARDTAPEAAEFFKEYIEIPSFSEVSQDKAAFAKAFRTYFLEQNPITG 390 Query: 324 RALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIM 383 + ++Q H + N P PL+ E+D V+ LPY HP+Y IPA EM++FS+ Sbjct: 391 KGIVQPHPKTVIVQNRPMRPLTEAELDHVYELPYTGEAHPSYTEP-IPALEMVKFSLTTH 449 Query: 384 RGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLR 443 RGCFGGCSFC+IT+H+GR+I SRS +S++ E + + + P F G+I+ +GGPTANMY + Sbjct: 450 RGCFGGCSFCAITQHQGRMITSRSIESVLREAKKLTEK-PDFKGIINGVGGPTANMYGMG 508 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 C+S + C +C+YP +CP +DT+H+ + L +R R+L G+K + GVRYD+A+E Sbjct: 509 CRSWEKQGACLDKACLYPRVCPALDTSHKKLLELMKRLRELPGVKHVFTGYGVRYDLALE 568 Query: 504 DPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYL 563 D Y++EL THH+ G L+IAPEH + M KPG Y+RF E F ++K+ GKEQY+ Sbjct: 569 DEEYLEELCTHHISGQLRIAPEHFSKRVTDAMSKPGKKVYERFSEKFAAFNKKCGKEQYI 628 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 + Y +S HPG +DM+ +A +L+ H +QVQ+F P+P+ ST MYYTG +P + Sbjct: 629 VNYLMSGHPGCTLKDMIEMAEYLRDHGGYTEQVQDFTPTPMTVSTCMYYTGLDP-----F 683 Query: 624 KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTI 681 + V+V K K++ + +AL+ Y PAN+ L+ +ALE G+ L+G+ CL+ Sbjct: 684 TGKKVYVAKDKKEKAMQRALMHYRSPANYELVYEALEKAGRLDLVGNAHKCLIRRKEK 741 >UniRef50_C9KPY8 Radical SAM domain protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY8_9FIRM Length = 607 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 264/664 (39%), Positives = 377/664 (56%), Gaps = 63/664 (9%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP+ R +M++ GW D + ++GDAYVDHPSFG AI R+LE G++VGII QPDW S Sbjct: 4 FLPICRRDMEERGWHELDFVFISGDAYVDHPSFGPAIICRLLEKHGYKVGIIPQPDWHST 63 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DF RLGKP L F V+AGNMDS++N++TA +++RH+DAY+P AG RP+RAT+VY R Sbjct: 64 KDFDRLGKPRLGFLVSAGNMDSLLNKFTAAKKVRHEDAYSPGGQAGHRPERATIVYCNRL 123 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 +E + DVP+I+GGIEASLRR AHYDYWS+ +RRS+LVDS+AD+L++G GER ++E+A L Sbjct: 124 RELYPDVPIIIGGIEASLRRMAHYDYWSNAIRRSILVDSQADLLIYGMGERAILEIAADL 183 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 G ++ I+DV T V W ++ + K Sbjct: 184 QQGVEVANIQDVHGTCYRVPNKDYAWDYIELPSFEAVRKD-------------------- 223 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQ 328 +KT+ E ++ D R L+Q Sbjct: 224 -------------------KKTFAEAFKIEYLEQDP----------------IRGRKLLQ 248 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGCF 387 ++ + V NPPA+PLS E+MD V+ LPY R HP Y +PA + ++FS+ RGCF Sbjct: 249 QNDEWCVVQNPPAMPLSEEQMDEVYGLPYMRTYHPIYEKAGGVPAIKEVQFSLVSQRGCF 308 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 GGC+FC+I HEGRIIQ RS S+I E + + + GF G I D+GGPTAN C Sbjct: 309 GGCNFCAIISHEGRIIQRRSHASLIREAKIL-THMKGFKGYIHDVGGPTANFRRTSCDGQ 367 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD-IAVEDPR 506 TCR C+ P+ C + +H I L R R L G+KK+ + SG+R+D + + Sbjct: 368 LKRGTCRGKPCLSPEPCKLLVADHSDYIKLLRELRSLPGVKKVFVRSGIRFDYLLLAKDD 427 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 ++ EL +HV G LKIAPEH + M K Y RF E F +++ GK+QYL+PY Sbjct: 428 FLYELCKYHVSGQLKIAPEHISDRVTRLMGKSNCAVYLRFVEKFRRMNERLGKKQYLVPY 487 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 F+S+HPG+ D V LA +++ + QVQ+F P+P ST M+YTG +P+ E Sbjct: 488 FMSSHPGSELSDAVELAEFIRDMGYHPQQVQDFIPTPGTLSTCMWYTGIDPM-----TGE 542 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 V+ K +++R+ +AL++Y P N ++R+AL ++ LIG CLV + Sbjct: 543 KVYSAKSYEEKRMQRALMQYWLPKNHEIVRKALHLAHREDLIGFGPKCLVRPRRETRPAK 602 Query: 687 ARRQ 690 ++ Sbjct: 603 PAKK 606 >UniRef50_A7H6E2 Radical SAM domain protein n=4 Tax=Anaeromyxobacter RepID=A7H6E2_ANADF Length = 658 Score = 720 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 301/688 (43%), Positives = 412/688 (59%), Gaps = 74/688 (10%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP S E+ GW + D++LVTGDAYVDHPSFG A+ GR+LEAQG++VGI+AQPDW S Sbjct: 35 FLPTSAAELRARGWSALDVLLVTGDAYVDHPSFGAAVIGRVLEAQGYKVGIVAQPDWRST 94 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 D +R+G+P LF GVT+G MDSM+N YTA +R R DDAYTPD VAGKRPDRAT Y + C Sbjct: 95 ADVLRMGRPRLFVGVTSGAMDSMVNHYTAHKRRRSDDAYTPDAVAGKRPDRATTAYARLC 154 Query: 149 KEAW-KDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 ++A+ P+++GGIEASLRR AHYDYW D V SVLV S AD+L++G GE+P++E+A R Sbjct: 155 RQAFGATTPIVVGGIEASLRRIAHYDYWDDRVLPSVLVPSGADLLVYGQGEKPVLEIARR 214 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 LA GE + + DV TA+ V Sbjct: 215 LASGEDLCGLVDVPGTALAV---------------------------------------- 234 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 + + E+ + LP++E++ D+ +A SR+ H E N AR L+ Sbjct: 235 ---------PDLALAMLEGRERKTLELPAYEEIALDRRRFAEFSRLYHLEHNAENARILV 285 Query: 328 QKHGD----RYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIM 383 Q+HG R+V +N P STEE+D + LPY R HP+YG A IPA E IR+S+ I+ Sbjct: 286 QRHGRGERARFVVVNEPMAAPSTEELDRIAELPYVREAHPSYGGAHIPALEQIRWSIQIL 345 Query: 384 RGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLR 443 RGC GC+FC ITEH+GR I SRSE S++ E+ + F G I+D+GG TANM+ +R Sbjct: 346 RGCAAGCAFCCITEHQGRDIASRSEASVLRELATLASK-ESFKGTITDVGGATANMWGMR 404 Query: 444 CKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE 503 C A CRR SCVYP +C +H P ++LY +AR +KG+K + + SGVRYD+A Sbjct: 405 CTDAEAHAVCRRASCVYPTVCKFFAVDHGPLVDLYEKARKVKGVKHLFVGSGVRYDLAQA 464 Query: 504 D----PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 D RY+K L HHV G LK+APEH E L M KPG+ S++R ++ F+ YS++AGK Sbjct: 465 DTKNGARYLKTLVQHHVSGQLKVAPEHVCEPVLKLMKKPGVSSFERLRKDFERYSREAGK 524 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 EQYL+PYFIS+HPG+ E L +L+ +R++ QVQ+F P+P+ ++ MY++G +P+ Sbjct: 525 EQYLVPYFISSHPGSSLEQAAELMDYLQDNRWKPQQVQDFMPTPMTLASDMYWSGYHPM- 583 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 E V V + ++R+ KALLR+ DPAN PLI +AL +G+ L P Sbjct: 584 ----TGEPVHVTRDMDEKRMQKALLRWGDPANRPLIEKALRKLGR----------LKPGE 629 Query: 680 TIEEMREARRQNRNTRPALTKHTPMATQ 707 + R + R P + Sbjct: 630 RLGPGMRPSRGSPKRRGPAGGPGPRRPR 657 >UniRef50_D2QYA0 Radical SAM domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QYA0_9PLAN Length = 768 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 312/746 (41%), Positives = 430/746 (57%), Gaps = 77/746 (10%) Query: 3 SISLIQPDRD-----LFSWPQYW-AACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYV 56 S+ L+QP L + + + GP LPM+REEM GWD DI+ VTGDAY+ Sbjct: 8 SLPLVQPSAGRLGDLLTTLRESSPSQPTGPVRPLPMTREEMQARGWDELDIVFVTGDAYI 67 Query: 57 DHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYT 116 DHPSF MAI GR+LEA GFRVGI++QPDW DD+ RLGKP LFF V+AGNMDSMIN YT Sbjct: 68 DHPSFAMAILGRVLEAAGFRVGIVSQPDWRKVDDWRRLGKPRLFFAVSAGNMDSMINHYT 127 Query: 117 ADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWS 176 A+R++R+DDAY+P G RPDRATL Y QR +EA+ VPVI GG+EASLRR AHYDYWS Sbjct: 128 ANRKVRNDDAYSPGGRIGLRPDRATLAYCQRSREAYPGVPVIAGGVEASLRRLAHYDYWS 187 Query: 177 DTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSG 236 D VRRS+L+D KAD+++FG GE ++++A LA G+ +RD+R A + + + Sbjct: 188 DKVRRSILLDCKADLVVFGMGEEIILQIARALAEGKDTKSLRDLRGIAYALGASEQPPAD 247 Query: 237 V----DSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYV 292 + T K I + N + + +AV PP + + Sbjct: 248 SLVLPSFEAVSTDKKAFAIATRTIHNETNPYNARRLVQWHDRQAVVCNPPSLPISQGSMD 307 Query: 293 LLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSV 352 ++ + P + Sbjct: 308 VIYGLPYTR-------------------------------------RPHPSYT------- 323 Query: 353 FALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSII 412 P PA+G MI+ SV IMRGCFGGC+FCSIT H+GRIIQSRS+DS+I Sbjct: 324 -------EPIPAFG--------MIKDSVTIMRGCFGGCTFCSITTHQGRIIQSRSKDSVI 368 Query: 413 NEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHE 472 EI+ + + P F G +SD+GGPTANMY + C P E+ CRR SCV+P IC + T+HE Sbjct: 369 GEIKRMTED-PKFKGTVSDIGGPTANMYQMTCSKPEVEEKCRRQSCVHPTICKLLGTSHE 427 Query: 473 PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPL 532 P I L + AR+L GIKK+L+ASG+R D+A P Y+K+L HHVGG+LK+APEHT+ L Sbjct: 428 PLIELMKEARELPGIKKVLVASGIRMDLARRSPEYMKDLVQHHVGGHLKVAPEHTDPDVL 487 Query: 533 SKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFR 592 +KM KP +++F F SK+AGK+QY++PYFI++HPG+ + M+NLA++LK++ +R Sbjct: 488 NKMRKPSNDDFEKFTASFMKESKKAGKKQYVVPYFIASHPGSDLDAMINLAVFLKQNGYR 547 Query: 593 LDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANW 652 DQVQ+F P+P +T MYYTG +P + + V++ K K R+L +ALL++ P N+ Sbjct: 548 PDQVQDFIPAPFDVATAMYYTGMDP-----FTFKPVYIAKQLKDRKLQRALLQFFKPENY 602 Query: 653 PLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT-KHTPMATQRQTP 711 +R+AL+ G+ LIG D L+PA +E RR N + HT + + + Sbjct: 603 FEVREALQRAGRTDLIGEGCDALIPANPPKEALARRRSQANEHFSGQYVHTIPSGKPEAK 662 Query: 712 ATAKKASSTQSRP-VNAGAKKRPKAA 736 + SR VN +P+ Sbjct: 663 DRPNPGKTGDSRGAVNPQFASKPRVK 688 >UniRef50_B5YAS7 Radical SAM n=2 Tax=Dictyoglomus RepID=B5YAS7_DICT6 Length = 589 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 251/637 (39%), Positives = 373/637 (58%), Gaps = 61/637 (9%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP++ E + GWD DII+VTGDAYVDHPSFG ++ GR LE GFRVGII QPDW Sbjct: 5 KFLPINLYEAKKRGWDELDIIIVTGDAYVDHPSFGASVIGRYLEYFGFRVGIIPQPDWKD 64 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 K+ F LGKP LFFG+TAG++DSM+ YT ++ R +DAYTP + GKRPDRAT+VY Sbjct: 65 KESFKVLGKPRLFFGITAGSVDSMVANYTPNKFKRREDAYTPGGLPGKRPDRATIVYANF 124 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 E + DVP++LGGIEASLRR +HYD+W + VR SVL+D++A ++++G GE+ +++A Sbjct: 125 VHEIFPDVPIVLGGIEASLRRFSHYDFWDNKVRHSVLLDARAKIIVYGMGEKQTLQIAKM 184 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L+ G+ EI + + E D Sbjct: 185 LSEGKSWYEIYQIPGIVFSLGEKEFDTFIKDK---------------------------- 216 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 Y+LLPSFE+V DK Y R+L + L+ Sbjct: 217 ----------------------DYILLPSFEEVSQDKDRYYDFQRLLLEGMKRK--KILV 252 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 Q+ G R++ NPP +++++D +++LP+ R+PHP+Y +IPA+E ++ S+ RGCF Sbjct: 253 QRDGKRFIIQNPP-PSYTSQDLDFIYSLPFMRLPHPSYKE-KIPAFETVKTSIVSHRGCF 310 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 G C+FCS+ H+G + SRSE SI+ EI + F G ISD+GGPTANMY LRCK Sbjct: 311 GSCTFCSLNLHQGWQVISRSEKSILEEIYRLTKH-REFRGTISDVGGPTANMYRLRCKIH 369 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 +C C++PD+C +++ +H +NL ++ ++++ +K + IASG+RYDIA++D Y Sbjct: 370 NIPGSCPERDCLFPDVCKYLEVDHSAQLNLLKKIKEIEKVKHVFIASGIRYDIALKDEYY 429 Query: 508 IKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 I E+ ++GG+L APEH ++ L M KP Y+ F ++F+ K+ KE Y+IPY Sbjct: 430 IGEIIKEGYIGGHLSAAPEHVKDHVLEIMKKPKFKVYEEFVDIFERNLKKYRKELYIIPY 489 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 FISAHPG +D +LA+++K L+Q+Q++ P PL ++ +YT + L K E Sbjct: 490 FISAHPGATIKDAWDLAMYIKGLGHYLEQIQDYTPLPLTPASCAFYTEYHTLRK-----E 544 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 ++V K + RRL +AL +Y D N + + + + Sbjct: 545 KIYVAKTYEDRRLQRALAQYKDKKNREFLVKNKKKIP 581 >UniRef50_Q7MVU9 UPF0313 protein PG_0934 n=25 Tax=Bacteria RepID=Y934_PORGI Length = 634 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 256/707 (36%), Positives = 371/707 (52%), Gaps = 87/707 (12%) Query: 21 AACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGII 80 A +LP S++EM+ GWD D+IL +GDAYVDHPSFG A+ GR+LEA+G RV I+ Sbjct: 2 AKHHPLTDWLPTSKKEMEAKGWDEADVILFSGDAYVDHPSFGAAVVGRILEAEGLRVAIV 61 Query: 81 AQPDWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDR 139 QP+W DF +LG+P LFFGV+AG MDSM+N+YTA+RRLR +DAYTPD + RPD Sbjct: 62 PQPNWRDDLRDFRKLGRPRLFFGVSAGAMDSMVNKYTANRRLRSEDAYTPDRRSDMRPDY 121 Query: 140 ATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGER 199 T+VYT+ KE + DVPVI+GGIEASLRR HYD Sbjct: 122 PTIVYTRILKELFPDVPVIVGGIEASLRRLTHYD-------------------------- 155 Query: 200 PLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDL 259 + LPG L G + H + L Sbjct: 156 -------------------------YWQDKLLPGILYQSGADLLIYGMGELPLHEIAQRL 190 Query: 260 PCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETN 319 + ++ + + P P E L S E+ DK A R + ++N Sbjct: 191 IAGEPFDSLKSIRQIAYLVPKGKTPVPCENDR-HLFSHEECLSDKRKQAQNFREIEIQSN 249 Query: 320 PGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFS 379 A ++Q GD + +NPP P+ST ++D F LPY R+PHP Y I AYEMI+ S Sbjct: 250 RYEADRILQAVGDSTIVVNPPFPPMSTAQIDQSFDLPYTRLPHPRYKGKIISAYEMIKHS 309 Query: 380 VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANM 439 VN+ RGCFGGC+FC+I+ H+G+ I SRSE S++ E++ I + + F G +SD+GGP+ANM Sbjct: 310 VNVHRGCFGGCAFCTISAHQGKFIASRSEASVLREVKEITE-MEDFKGYLSDVGGPSANM 368 Query: 440 YMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD 499 Y ++ + C++ SC++P++CP+++ +H P ++L RR IKK I SGVR D Sbjct: 369 YKMQGYDLSICKRCKKPSCIHPNVCPNLNADHRPLLDLLRRIDKNPKIKKSFIGSGVRMD 428 Query: 500 IAVED----------PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 + + + Y ++L HV G LK+APEH+ + L+ M KP + F + Sbjct: 429 LLLHNYKDKVLKKAADEYTEDLIVKHVSGRLKVAPEHSSDRVLNLMRKPPFRQFAEFTKR 488 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 F ++ G Q LIPYFIS+HPG +EDM LA+ KK F+L+Q+Q+F P+P+ +T Sbjct: 489 FQRINEAHGLRQQLIPYFISSHPGCTEEDMAELAILTKKLDFKLEQIQDFTPTPMTLATE 548 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 MYYTG +P Y + V+ +++ ++ IR+ L +G+ LI Sbjct: 549 MYYTGYHP-----YTLQPVYTAIKKEEKMRQHMFFFWYKREEADKIRRELHRIGRPDLI- 602 Query: 670 SRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKK 716 A+ +R T +HTP +TQ + + + Sbjct: 603 -----------------AKLFDRTTSSRNDRHTPPSTQPRKSKSKSR 632 >UniRef50_B8DSG7 Radical SAM domain protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DSG7_DESVM Length = 771 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 269/756 (35%), Positives = 387/756 (51%), Gaps = 45/756 (5%) Query: 12 DLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLE 71 PQ FLP + EM LGWD D++LV+GDAYVDHP+F MA+ GR L Sbjct: 12 PRAYIPQRGRTPLPQPAFLPTTAREMRDLGWDRLDVLLVSGDAYVDHPTFAMALLGRWLV 71 Query: 72 AQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDN 131 A GFR GI+AQP W DD R+G+P LF G++AG++DSM+ YTA R+ RHDDA+TP Sbjct: 72 AHGFRTGIVAQPRWDIPDDVARMGRPRLFTGISAGSLDSMLAHYTAFRKKRHDDAFTPGG 131 Query: 132 VAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADM 191 AG RP+RA +VY ++A+ +PV+LGGIEASLRR +HYD+W+D +RR +L+D+KAD+ Sbjct: 132 RAGARPNRAAIVYANLARQAFPGLPVVLGGIEASLRRISHYDFWTDALRRPILMDAKADL 191 Query: 192 LMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAII-----VKEALPGWSGVDSTRLDTPG 246 L++G GER L++ L D + A++ + + +PG + + Sbjct: 192 LVWGMGERALLDATCALDAAVETVG-ADAYDAALLPPLAEIFDGIPGTARMGRVTEWDAA 250 Query: 247 KIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVL 306 D G+D P AD + + A PP P + + LPS + D L Sbjct: 251 PADDAARVTGDD-PDADELSNDGQDEGHTAPGAIPPTPP---ISLMRLPSHAAMAEDPRL 306 Query: 307 YAHASRILHHETNPGCARALMQKHGD----RYVWINPPAIPLSTEEMDSVFALPYKRVPH 362 A+ +L + G ARA+ Q D R V + PPA PLS +EMD+++ALP+ R H Sbjct: 307 LMRATLLLERHVHRGDARAI-QPVDDTPTARAVLLAPPAPPLSPDEMDALYALPFARRAH 365 Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P++ +PA EMIR S+ RGC GGCSFCS+ H+GR I SRS S+++E + D + Sbjct: 366 PSHREP-VPAEEMIRTSITTHRGCGGGCSFCSLALHQGRRIASRSRGSVLDEARRLND-M 423 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 F G +SD+GGP+ANM+ RC A CRR SC++P +CP + + L R R Sbjct: 424 ERFNGSVSDVGGPSANMWQARCTLDPAR--CRRASCMHPRVCPGFAVDQSEAVELLRAVR 481 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 G++ + +ASGVR+D+A+ D ++ GG LK+APEH +G L M KPG+ Sbjct: 482 ATPGVRHVRVASGVRFDLALRDADALRAYTMEFTGGQLKVAPEHICDGVLDLMRKPGLAV 541 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 ++RF F +S AGKEQY++PY +SA PG D+DM L+ WL + QVQ F P+ Sbjct: 542 FERFLTAFADHSTAAGKEQYVVPYLLSAFPGCTDDDMRTLSRWLAARGWSPRQVQCFIPT 601 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL---------RYHDPANWP 653 P +T M++ G +P V V + D R +L P Sbjct: 602 PGTVATAMFFAGIDPE------GNPVPVARTDAARLRQHRILIPDFGLPPAAGGHAPGAP 655 Query: 654 LIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNR-----------NTRPALTKHT 702 R ++ G+ + +D + RQ R R Sbjct: 656 GNRAGGKSGGRPNERSGGQDHRNHQGRGDRQGRGDRQERGSDADRNRRGHGERSGGKADG 715 Query: 703 PMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVG 738 P + ++ + RP + G Sbjct: 716 RPGGMPDGPGNGDRNANRNETRNDKRPDSRPGSRPG 751 >UniRef50_D1N9W5 Radical SAM domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9W5_9BACT Length = 601 Score = 672 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 259/658 (39%), Positives = 356/658 (54%), Gaps = 69/658 (10%) Query: 23 CFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQ 82 FLP SR+EM+Q G+D DI+L+TGD YVDHPSFG+AI GR+LE+ G+RVG+IAQ Sbjct: 3 PSKRPLFLPTSRKEMEQAGYDELDILLITGDCYVDHPSFGVAIIGRLLESLGYRVGLIAQ 62 Query: 83 PDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATL 142 PDW + +G+P + GVT+GNMDSM+N YT RRLR DD ++ + GKRP A Sbjct: 63 PDWKDPEALKIMGRPRIGCGVTSGNMDSMVNIYTVGRRLRKDDCFSENGEIGKRPPHALT 122 Query: 143 VYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLV 202 VY Q ++A+ + V LGG+EAS RR AHYDYW D +R SVL+DSKAD+L++G GERP Sbjct: 123 VYAQLVRQAFPGINVQLGGLEASFRRVAHYDYWQDKIRPSVLIDSKADVLVYGMGERPTP 182 Query: 203 EVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCA 262 EV R A G P+ IR Sbjct: 183 EVYRRWAEGLPLDGIRG------------------------------------------- 199 Query: 263 DNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 A+ + + + Y+ LPS+E+ DK ++R++ E N Sbjct: 200 ----------TARLLGKKAAEAFDPKDQYLELPSYEETLADKDALMTSTRMIEAEMNYLG 249 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 R L Q++GDR V I PP L+ EE+D V LPY R+PHP Y RIPA+E I+ S+ Sbjct: 250 GRGLFQRYGDRIVVIEPPPEVLTPEELDKVHELPYARMPHPKY-KGRIPAFETIKDSIQA 308 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 +RGC GGC+FC + H+GR + SRSEDSI+ E++AI D P F G +SD+GG N+Y Sbjct: 309 VRGCPGGCAFCGLVVHQGRHVMSRSEDSIMRELDAIADQ-PFFKGTVSDVGGAAGNIYQS 367 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 R + C+R SC+YP CP+ + L RR +K + I SG+R D+A+ Sbjct: 368 RY-DLERCRRCKRSSCLYPAPCPNYTCTGLEIVRLLRRMSAHPKVKHVYINSGIRLDLAL 426 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 P ++EL + HV G+LK+APEH L M K + +F ELF+ SK+ GKEQY Sbjct: 427 RQPELLRELISKHVSGHLKVAPEHLNPEVLKLMRKSSAEEFYKFMELFEKISKECGKEQY 486 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 LIP FIS PG ++M + +L+KH + L QVQ++ P P+ MYYTGK P Sbjct: 487 LIPLFISNFPGCSGKEMKTVDDFLEKHHWSLQQVQDYIPLPMTMGAAMYYTGKAPD---- 542 Query: 623 YKSEDVFVPKGDKQRRLHKALLRYHDPAN-------WPLIRQALEAMGKKHLIGSRRD 673 ++ V +G +RR +L+ N +A G+ G + Sbjct: 543 --GREIVVNRGLAERREQIGVLKKRRSGNAINSDPARRCWEKAPRRPGRNRPAGGFKK 598 >UniRef50_C7LQA1 Radical SAM domain protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQA1_DESBD Length = 607 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 255/652 (39%), Positives = 356/652 (54%), Gaps = 72/652 (11%) Query: 19 YWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVG 78 + + FLPM+R EMD LGWD D++LV+GDAYVDHPSF MA+ GR L A G R G Sbjct: 4 FSSKSLPQPKFLPMTRAEMDALGWDELDVLLVSGDAYVDHPSFAMALLGRALVAHGLRTG 63 Query: 79 IIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPD 138 II QP W +D + +G+P LF GV+AG +DSM+ YTA R+ R +DAYTP AG RP+ Sbjct: 64 IITQPRWDGPEDLLAMGRPRLFAGVSAGAIDSMLAHYTAFRKKRSEDAYTPGGRAGARPN 123 Query: 139 RATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGE 198 RA +VYT + A+ + VILGGIEASLRR HYD+W+D +R+ +L+D+KAD +++G GE Sbjct: 124 RACIVYTNLLRRAFPGLTVILGGIEASLRRITHYDFWTDALRKPILLDAKADAVVYGMGE 183 Query: 199 RPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGED 258 R ++ +A RLA G +I + T + D P +I+ H Sbjct: 184 RAILSIADRLAAG---RDILGIPGTV--------------TVGEDFPAEIELPSH----- 221 Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 E + D A+ +L + Sbjct: 222 ---------------------------------------EDMLADPKELMRATLLLEKQV 242 Query: 319 NPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRF 378 + G A +Q+ +R + + PPA PL+T EMD+++ALP+ R HP Y IPA EMIR Sbjct: 243 HDGTDWA-VQRVANRAILVAPPATPLTTTEMDTIYALPFARKAHPGYLLP-IPAEEMIRD 300 Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 SV RGC GGCSFC++ H+GR I SRS SI++E+ + + P F G +SD+GGP+AN Sbjct: 301 SVTSHRGCGGGCSFCTLALHQGRRIASRSRASILDEVRRMAAS-PDFKGHVSDVGGPSAN 359 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 M+ C Q C+R SC+ P +CPH + + ++L R R G++ + +ASGVR+ Sbjct: 360 MWGASCAKEG--QPCKRPSCMTPTVCPHFRMDQKAHLDLLRTLRRTPGVRGVRVASGVRF 417 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAG 558 D+A++D + VGG LKIAPEH + L M KPG ++ F +FD SK+AG Sbjct: 418 DLALKDMDALGGYLREFVGGQLKIAPEHVCDHVLRLMRKPGNRVFEEFLTIFDRESKRAG 477 Query: 559 KEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPL 618 KEQY+IPY +SA PGT D+DM LA WL ++ QVQ F P P A +T MY+ G P Sbjct: 478 KEQYVIPYLMSAFPGTTDDDMHALARWLGSRGWKPKQVQCFIPIPGAVATAMYHAGITPE 537 Query: 619 AKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 + V VP+ D++R +L + + K G Sbjct: 538 ------GKSVHVPRTDEERLRQHRILLPPEDRGAKRPKDTQREPHPKSCPGR 583 >UniRef50_B8J3X2 Radical SAM domain protein n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J3X2_DESDA Length = 746 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 270/755 (35%), Positives = 370/755 (49%), Gaps = 97/755 (12%) Query: 24 FGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQP 83 F+PMS EEM LGWD D++ VTGDAYVDH SFG + R L GFR GI+AQP Sbjct: 32 HRQPLFVPMSVEEMHALGWDCLDVLFVTGDAYVDHSSFGSVLLARWLIHHGFRAGIVAQP 91 Query: 84 DWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLV 143 W DD + +G+P LF G++AG +DS++ YTA R+ RHDDAYTP AG RP+RA LV Sbjct: 92 RWDKPDDLLVMGRPRLFAGISAGALDSLLAHYTAFRKKRHDDAYTPGGKAGARPNRACLV 151 Query: 144 YTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVE 203 Y + A+ +P+ LGGIEASLRR +HYD+W+D++R+ +L+D+KAD+L++G GE +E Sbjct: 152 YANLARRAFPGLPLALGGIEASLRRVSHYDFWTDSLRKPILMDAKADLLIWGMGEYATLE 211 Query: 204 VAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCAD 263 A RL E R + TA + Sbjct: 212 YARRLHKAEDT---RGIPGTAWL------------------------------------- 231 Query: 264 NKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCA 323 +Q + P+ + V LPS E + D V ++ L + + A Sbjct: 232 ----DRLEQTPEGPRPAGLPPELAQTPAVPLPSHEDILADPVQLLVMTQALERQVHRLDA 287 Query: 324 RALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIM 383 A Q GDR + + PA PL+TEEMD+++ +P+ R PHP+Y IPA EM+R S+ Sbjct: 288 WA-FQPVGDRALVLARPAPPLTTEEMDALYEIPFTRRPHPSYREP-IPAAEMMRTSITSH 345 Query: 384 RGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI-RDTVPGFTG--VISDLGGPTANMY 440 RGC GGCSFCS+ H+GR I SRSEDSI+ E + ++ + G ISD+GGPTANM+ Sbjct: 346 RGCGGGCSFCSLALHQGRRISSRSEDSILAEARRLGQENMERGKGPVAISDVGGPTANMW 405 Query: 441 MLRCKSPRAEQT--------------------------CRRLSCVYPDICPHMDTNHEPT 474 C R + CRR SC YP IC T Sbjct: 406 QGYCALDRMHERGSANRTNPAPAQPRSQAGAEERNTSRCRRTSCCYPTICKFFTTPQGKH 465 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 + L R L +K+ IASGVR D+A+ D + GG LK+APEH G LS Sbjct: 466 VGLLRSVAALPEVKQARIASGVRADLALRDAAALAAYTGEFTGGQLKVAPEHCAPGVLSL 525 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M KP + ++ F F SK AG+EQY++PY +S PG D DM LA WL++ + Sbjct: 526 MRKPPLEVFEAFLASFIRQSKAAGREQYVVPYLLSGFPGCTDNDMRTLANWLRERNWNPR 585 Query: 595 QVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL---------R 645 Q Q F P+P +T M+Y GKN ED++V + D QR +L R Sbjct: 586 QTQCFIPTPGTIATAMFYCGKN------EAGEDIYVARTDAQRLRQHGILMPGRSSAEAR 639 Query: 646 YHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT-KHTPM 704 D N P RQ +A +K +R P E R + +T + + T Sbjct: 640 RQDRPNRPD-RQGKKAAAEKDATAGKRTA--PGREHGEKRHNGNKTEHTAGSGRSRGTNR 696 Query: 705 ATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 739 P +++ + P + R GR Sbjct: 697 PDHPARPDRSRRTAEQ--HPPREAERARDGK-TGR 728 >UniRef50_D1P9M1 Radical SAM domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1P9M1_9BACT Length = 730 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 241/726 (33%), Positives = 355/726 (48%), Gaps = 88/726 (12%) Query: 24 FGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQP 83 + FLP +++E + GWD D+IL +GDAYVDHPSFG AI GR+LEA G+RV I+ QP Sbjct: 3 YKLTDFLPTTKKECELRGWDELDVILFSGDAYVDHPSFGPAILGRILEANGYRVAIVPQP 62 Query: 84 DWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATL 142 DW DF +LG+P LFFGV+ G MDSM+NRYTA+RR+R +DA++PD+ R Sbjct: 63 DWHGDFRDFKKLGRPRLFFGVSPGAMDSMVNRYTANRRMRSEDAFSPDSRHDMR------ 116 Query: 143 VYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLV 202 D P I ++ Sbjct: 117 ----------PDYPSI----------------------------------VY-------T 125 Query: 203 EVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGED---- 258 ++ +L P++ ++ W + D I + GE Sbjct: 126 QILKKLFPDVPVA--LGGIEASLRRISHYDYWKDELRKCILCDSGADLILYGMGERSIVE 183 Query: 259 ----LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRIL 314 + + + P ++ ++L S E+ +K A R L Sbjct: 184 LANAFAEGKTLSQIHEMPQVVFYCKESEIPGGFKDDDIILHSHEECLHNKKGQAENVRHL 243 Query: 315 HHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYE 374 E N A+ ++Q+ +YV +NPP ++T E+D+ F LPY R+PHP Y IPAYE Sbjct: 244 EEEANKMHAQRMIQEVDGKYVVVNPPFPLMTTAELDAAFDLPYTRLPHPKYKGKTIPAYE 303 Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 MI+FSVN+ RGCFGGCSFC+I+ H+G+ + RS++SI+ E++ I +P F G +SDLGG Sbjct: 304 MIKFSVNLHRGCFGGCSFCTISAHQGKFVVCRSKESILKEVKKII-QMPDFKGYLSDLGG 362 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 P+ANMY + K+ +A + C+R SCV P ICP+++T+H + +Y L GIKK I S Sbjct: 363 PSANMYGMHGKNQKACEVCKRPSCVNPQICPNLNTDHSKLLEIYHAVDALPGIKKSFIGS 422 Query: 495 GVRYDIAVEDP----------RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYD 544 GVRYD+ + Y +EL T HV G LK+APEHT L M KP + Sbjct: 423 GVRYDLLLHKSKDEKVNQAAREYTRELITKHVSGRLKVAPEHTSPEVLKFMRKPSFDLFY 482 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 FK +FD +K+ G Q +IPYFIS+HPG +EDM LA+ K F L+QVQ+F P+P+ Sbjct: 483 EFKRIFDKINKEEGLNQQIIPYFISSHPGCHEEDMAELAVITKGLDFHLEQVQDFTPTPM 542 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 ST +YTG +P Y E V K K++ + ++ P I L +G+ Sbjct: 543 TISTETWYTGYDP-----YTLEPVSSAKTQKEKLAQRMFFFWYKPEERRAIESELRRIGR 597 Query: 665 KHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRP 724 LI D L ++ + ++ + + + + + + + R Sbjct: 598 ADLI----DKLYDRKSMGGSFKGKKTHYDDKAIGSTYDNPGVGKGAKGKRGTGRNASDRY 653 Query: 725 VNAGAK 730 G Sbjct: 654 APKGFG 659 >UniRef50_C9RQ46 Radical SAM domain protein n=28 Tax=Bacteria RepID=C9RQ46_FIBSS Length = 739 Score = 646 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 249/722 (34%), Positives = 358/722 (49%), Gaps = 76/722 (10%) Query: 27 APFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWS 86 FLP+ +E++D+LGWD D+I+++ DAYVDHP FG A+ GR+LE +G RV I+ QP+W Sbjct: 4 PRFLPICKEDLDELGWDYVDVIIISADAYVDHPCFGHAVVGRLLEHEGLRVAILPQPNWR 63 Query: 87 SK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYT 145 DF +LG P LFF +++G MDSM+N YTA +RLR DDA+TP N AG RPD AT Y Sbjct: 64 DDLRDFKKLGTPRLFFAISSG-MDSMVNHYTAAKRLRSDDAFTPGNKAGFRPDYATYTYA 122 Query: 146 QRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVA 205 + K+ + DVP+++GG+E+S +RR D Sbjct: 123 KILKKLYPDVPLLIGGLESS-------------LRRVTHYD------------------- 150 Query: 206 HRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNK 265 + P + G + L Sbjct: 151 -------------------YWSNKLKPSILFDTQADILVYGMGEKPLKEIVRLLKKGVPF 191 Query: 266 PVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARA 325 + + + PK + + L S+E+ K R + E N Sbjct: 192 SSLNSVPQTAYLAPKGSVPKNSKWEDLRLYSYEECLESKRNQIENCRRVDIECNKWFQHR 251 Query: 326 LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG-NARIPAYEMIRFSVNIMR 384 ++Q ++ V INP P+ E+D F PY R PHP Y IPA++MI+FS+N R Sbjct: 252 ILQDVAEQTVVINPAYPPMEYGELDESFEYPYAREPHPRYKKRGNIPAFDMIKFSINTHR 311 Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GCFGGCSFC+I H+G+ I SRS +SI+ E+E I + GF G I+DLGGP+ANMY +R Sbjct: 312 GCFGGCSFCAINAHQGKFIASRSRESILREVE-IVTNMEGFAGTITDLGGPSANMYNMRG 370 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVE- 503 + P Q C R SC+ P IC +MDT+H ++LYR R+ +K + I SGVRYD+ ++ Sbjct: 371 RDPSRCQKCARASCLTPKICDNMDTHHAEILSLYREVRNHPKVKHLFIGSGVRYDMLLQE 430 Query: 504 ---------DPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 Y +EL +HV G LK+APEHT + L M KP + +FKE FD Sbjct: 431 TDDEELRKDHEEYARELIDYHVSGRLKVAPEHTSDAVLKLMRKPSFTLFHKFKEFFDDEC 490 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 K+ GK+Q LIPYFIS+HPG + DM LAL K+ F+L+QVQ+F P+P+ +T M+Y Sbjct: 491 KRIGKKQQLIPYFISSHPGCTEADMAELALETKQLGFQLEQVQDFTPTPMTIATEMFYAE 550 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 P + +FV K +++ K ++ PAN P +R+ LE + +G Sbjct: 551 MTPD------GKPLFVAKTPEEKANQKQFFFWYIPANRPHLREVLERL----KMGKVSRL 600 Query: 675 LV-PAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRP 733 L+ E + R +T A K ++R + G + R Sbjct: 601 LLSRTAMAEGKEYFPSKEREENEDFRNREMQKRDERTNALRPKKEKVKNRWRDDGYEPRE 660 Query: 734 KA 735 Sbjct: 661 NR 662 >UniRef50_C9MQP2 Radical SAM domain protein n=4 Tax=Prevotella RepID=C9MQP2_9BACT Length = 710 Score = 644 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 234/737 (31%), Positives = 364/737 (49%), Gaps = 90/737 (12%) Query: 22 ACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIA 81 + F FLP +++E++ GWD DIIL +GDAY+DHP+FG+A+ GR LEA G++V I+ Sbjct: 40 SRFQLTDFLPTTKKEVELRGWDQLDIILFSGDAYIDHPAFGVAVIGRTLEAAGYKVAIVP 99 Query: 82 QPDWSSK-DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRA 140 QPDW DF +LG+P L+FG+ G MDSM+N+YTA+RRLR +DAY+PD Sbjct: 100 QPDWHGDLRDFKKLGRPRLYFGIAPGAMDSMVNKYTANRRLRSEDAYSPDGRHD------ 153 Query: 141 TLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERP 200 + + +++ N Sbjct: 154 -------LRPEYPS-------------------------------------IVYAN---- 165 Query: 201 LVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLP 260 + +L P+ + ++ W + D I + GE Sbjct: 166 ---ILKQLYPDVPV--VLGGIEASLRRLTHYDYWKDCLRKCILCDAHADMIIYGMGEKQV 220 Query: 261 CADNKP--------VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASR 312 K + + + P + ++L S E +K A + Sbjct: 221 VEIAKELETGIKIKDLKNVPQTVYLCKEEEIPGGINEDDIVLHSHEACLHNKKFQAENFK 280 Query: 313 ILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPA 372 + E+N A+ ++Q + Y +NPP ++T E+D+ + LPY R PHP Y IPA Sbjct: 281 YIEEESNKKHAQRILQAVDNLYAVVNPPYPTMTTAEIDAAYDLPYTREPHPKYRGKTIPA 340 Query: 373 YEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDL 432 YEMI+ SVNI RGCFGGC+FC+I+ H+G+ + RS++SI+ E++ + + +P F G +SDL Sbjct: 341 YEMIKHSVNIHRGCFGGCAFCTISAHQGKFVSCRSKESILKEVKQVIE-MPDFKGYLSDL 399 Query: 433 GGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILI 492 GGP+ANMY + K+ +A + C+R SCV P+ICP+++T+H +++Y +L GIKK I Sbjct: 400 GGPSANMYGMAGKNQKACEHCKRPSCVNPEICPNLNTDHSRLLDIYHSVDELSGIKKSFI 459 Query: 493 ASGVRYDIAVEDPR----------YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 SGVRYD+ + + Y EL T HV G LK+APEHT + L M KP Sbjct: 460 GSGVRYDLLLHKSKDEKSNEAARQYTHELITRHVSGRLKVAPEHTSDRVLKLMRKPSFQQ 519 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + FK +FD +++ G Q +IPYFIS+HPG ++EDM LA+ K F L+Q+Q+F P+ Sbjct: 520 FYIFKRIFDRINREEGLRQQIIPYFISSHPGCQEEDMAELAVLTKDLDFHLEQIQDFTPT 579 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 P+ ST +YTG +P Y E +F K K++ + ++ P I + L+ + Sbjct: 580 PMTVSTEAWYTGYDP-----YTLEPIFSAKTPKEKLAQRQFFFWYKPEARRDIERELQRI 634 Query: 663 GKKHLIGSRRDCLVPAPTIEEMREARRQNRN-----TRPALTKHTPMATQRQTPATAKKA 717 G+ LIG D VP + + + + R A P + T + K Sbjct: 635 GRSDLIGKLYDN-VPKRHPRAVYDPKAVGSSPDIPRRRSAGKVDKPNTRHKSTTSNGGKK 693 Query: 718 SSTQSRPVNAGAKKRPK 734 + + G + + + Sbjct: 694 PKSYNPNFMGGRRHKQR 710 >UniRef50_A9KIV0 Radical SAM domain protein n=5 Tax=Clostridiales RepID=A9KIV0_CLOPH Length = 685 Score = 634 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 230/717 (32%), Positives = 366/717 (51%), Gaps = 73/717 (10%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 +LP+SRE+M+ GW+ CD + V GDAYVDHPSFG AI R+LE+ G++VGIIAQPDW Sbjct: 4 DYLPISREDMNNRGWEQCDFVYVIGDAYVDHPSFGPAIISRVLESNGYKVGIIAQPDWKD 63 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 ++ LG P L F V GNMD+M+N Y+ ++ R AT Y+ Sbjct: 64 ENSIQILGTPRLGFLVCGGNMDTMVNHYSVAKKRR-----------------ATDAYS-- 104 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 + L A+ +++ N + + Sbjct: 105 -----PGGQIGLRPDRAT--------------------------IVYCN-------LIRK 126 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGE----DLPCAD 263 + PI I +++ WS + + D + + GE +L A Sbjct: 127 VYKDAPI--IIGGIESSLRRLAHYDYWSDKVRRSILLDSQADVLSYGMGEHSIVELADAL 184 Query: 264 NKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCA 323 N +A K + TV R V+LPS+E + DK ++A + + T+P A Sbjct: 185 NSGIAIKDITFISGTVYKTRDLSSVYEPVMLPSYEDILRDKEVFARSFYTQYVNTDPFTA 244 Query: 324 RALMQKH-GDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVN 381 + L++ + YV N PA PLS EMD V+ALPY R HP+Y IPA E ++FS+ Sbjct: 245 KCLVEGYESGDYVVQNVPAKPLSQSEMDRVYALPYMRDYHPSYEEQGGIPAIEELKFSLT 304 Query: 382 IMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYM 441 RGCFGGC+FC++T H+GR+IQ+RS +SI++E + P F G I+D+GGPTAN Sbjct: 305 SNRGCFGGCNFCALTFHQGRMIQTRSHESIVSEA-TLLTWDPEFKGYINDVGGPTANFRH 363 Query: 442 LRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIA 501 C+ + C C++P C ++ +H ++L ++ R+L +KK+ I SG+R+D Sbjct: 364 TSCEKQNTKGVCLNKQCLFPKPCSNLKVDHTDYLSLLKKLRELPKVKKVFIRSGIRFDYL 423 Query: 502 VEDPR--YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGK 559 +ED ++KEL +HV G LK+APEH + LS M KP Y++F + ++ GK Sbjct: 424 IEDKDDTFMKELCENHVSGQLKVAPEHISDAVLSMMGKPENSVYEKFITRYKKTNETLGK 483 Query: 560 EQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLA 619 +Q+++PY +S+HPG+ ++ V LA +L+ + +QVQ+FYP+P ST MYYTG +P Sbjct: 484 KQFVVPYLMSSHPGSTMKEAVALAEYLRDIGYMPEQVQDFYPTPSTVSTCMYYTGIDP-- 541 Query: 620 KIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAP 679 + V+VPK ++ + +AL++Y +P N+ L+ +AL + LIG + CL+ Sbjct: 542 ---RTMKPVYVPKSPHEKAMQRALIQYRNPKNYNLVVEALTLANRTDLIGYDKKCLIRPN 598 Query: 680 TIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAA 736 +++ + R + + + ++ K K SS ++ G + + Sbjct: 599 YMDKDKFGSRPSESGKNSVRKGGARGASNSGDGREKNGSSKGNKGSRGGFGSKAGRS 655 >UniRef50_B0VIP9 Radical SAM domain protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIP9_9BACT Length = 547 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 234/622 (37%), Positives = 331/622 (53%), Gaps = 83/622 (13%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 PFLP+++ ++ + WD DIIL++GDAY+DHPSF AI GR LEA GFRVGII QPDW + Sbjct: 2 PFLPVNQSDLKERDWDYLDIILISGDAYIDHPSFAAAIIGRTLEAAGFRVGIIPQPDWRN 61 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 F LGKP LFFG+TAGNMDSM+N YTA R+LR+DDAY+PD ++GKRPDRA Sbjct: 62 DSSFTVLGKPRLFFGITAGNMDSMVNHYTAQRKLRNDDAYSPDGISGKRPDRA------- 114 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 ++++ N + R Sbjct: 115 -------------------------------------------IIIYTN-------IIKR 124 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 L G PI + ++ D R YG + + Sbjct: 125 LFKGVPIV----IGGIESSLRRIAHYDFWQDKVRNSILADSKGDILIYGMGERPVTDLAI 180 Query: 268 APKKQEAKAVTVQPPRPKPWEKTY-----VLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 +K + P + T+ ++LP EK K + +R + Sbjct: 181 LLQKGVPVSSIQNLPSTVVFSSTFPAKEDIILPEAEKCSA-KETFYQMTRQFE---DNYR 236 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 + + QK+ R++ NPPA PL+T+EMDS++ALP+ PHP Y +IPAYE I+ S+ Sbjct: 237 TKTIFQKNAGRWLKHNPPAKPLTTKEMDSIYALPFAYQPHPVYAGHKIPAYEQIKDSITS 296 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 RGC+GGC+FC+I H+GR IQSRSE S++ E + TG ISD+GGPTANMY Sbjct: 297 HRGCYGGCNFCAIACHQGRNIQSRSETSLLKEAQ-------KHTGTISDVGGPTANMYAS 349 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 C E TC+R SC+ PDICP++ NH + + + +L IK + IASG+RYD+AV Sbjct: 350 FCGLDFPE-TCKRNSCLVPDICPNLQINHSVQLEILAKIGNLPRIKHLFIASGIRYDMAV 408 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 D YI+ LAT + GG LK+APEH+ L M KP + +++F + F Y+ +AG + Sbjct: 409 NDDNYIEALATKYTGGRLKLAPEHSVSSVLRLMNKPQIEVFEKFCKKFYFYTNKAGLKSQ 468 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 +IPY I HPGT ED L WL+K++ +++QVQ F P+P+ ST MYYTG + Sbjct: 469 IIPYLIIGHPGTTMEDAFELRNWLRKNKLKVEQVQEFTPTPMTISTCMYYTGLD-----Y 523 Query: 623 YKSEDVFVPKGDKQRRLHKALL 644 + + +PK + RR + ++ Sbjct: 524 ETGKPIHIPKPSEIRRQKELII 545 >UniRef50_Q8R682 UPF0313 protein FN0734 n=26 Tax=Bacteria RepID=Y734_FUSNN Length = 568 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 211/632 (33%), Positives = 316/632 (50%), Gaps = 71/632 (11%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP ++EEM LGWDS D++L++GD Y+D G + G+ L GF+VGIIAQP+ Sbjct: 2 KFLPTTKEEMKNLGWDSIDVLLISGDTYLDTSYNGSVLVGKWLVEHGFKVGIIAQPEVDV 61 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 DD RLG+PNLFF V+ G +DSM+ YTA ++ R D +TP V KRPDRA Sbjct: 62 PDDITRLGEPNLFFAVSGGCVDSMVANYTATKKRRQQDDFTPGGVNNKRPDRA------- 114 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHR 207 +L++ N + R Sbjct: 115 -------------------------------------------VLVYSN-------MIRR 124 Query: 208 LAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 G + +++ W+ + K D + + GE + Sbjct: 125 FFKGTTKKIVISGIESSLRRITHYDYWTNKLRKPILFDAKADILSYGMGE-MSMLQLANA 183 Query: 268 APKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALM 327 ++ K + K ++ Y+ LPS + DK + A + +P A+ L Sbjct: 184 LKNGEDWKNIKGLCYLSKEMKQDYLSLPSHSECLADKDNFIEAFHTFYLNCDPITAKGLC 243 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRGC 386 QK DRY+ NPP+ S E MD ++++ + R HP Y + A + I++SV RGC Sbjct: 244 QKCDDRYLIQNPPSESYSEEIMDKIYSMEFARDVHPYYKKMGAVRALDTIKYSVTTHRGC 303 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 +G C+FC+I H+GR I SRS+ SI+ E++ I T P F G ISD+GGPTANMY L CK Sbjct: 304 YGECNFCAIAIHQGRTIMSRSQSSIVEEVKNIAGT-PKFHGNISDVGGPTANMYGLECKK 362 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 C C+YP C H+ NH + L ++ + + IKKI IASG+RYD+ ++D + Sbjct: 363 KLKLGACPDRRCLYPKKCLHLQVNHNNQVELLKKLKKIPNIKKIFIASGIRYDMILDDNK 422 Query: 507 ----YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 Y+KE+ H+ G +KIAPEHTE+ L M K G + FK F + + GK+Q+ Sbjct: 423 CGQMYLKEIIKDHISGQMKIAPEHTEDKILGLMGKDGKSCLNEFKNQFYKINNELGKKQF 482 Query: 563 LIPYFISAHPGTRDEDMVNLALWL-KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 L Y I+AHPG +D+DM++L + ++ R +QVQ F P+P ST MYYT K+P Sbjct: 483 LTYYLIAAHPGCKDKDMMDLKRYASQELRVNPEQVQIFTPTPSTYSTLMYYTEKDP---- 538 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDPANWP 653 + ++ +FV K + +++ K ++ N Sbjct: 539 -FTNQKLFVEKDNGKKQKQKDIV-TEKRKNRK 568 >UniRef50_C7N5G2 Fe-S oxidoreductase n=54 Tax=cellular organisms RepID=C7N5G2_SLAHD Length = 718 Score = 605 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 224/689 (32%), Positives = 340/689 (49%), Gaps = 79/689 (11%) Query: 8 QPDRDLFSWPQYWAACFGPA------PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSF 61 +P P+ A FLPM+ E GWD D + V GDAYVDHPSF Sbjct: 95 KPQAAAAQCPKQPAKPQPVPHTRDESEFLPMTMEAARARGWDQVDFVYVCGDAYVDHPSF 154 Query: 62 GMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRL 121 GMAI R+LE G++VGIIAQPDW G+P L F V++GNMDSM+N YT ++ Sbjct: 155 GMAIITRVLEHAGYKVGIIAQPDWRDPASVSVFGEPRLGFMVSSGNMDSMVNHYTVAKKK 214 Query: 122 RHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRR 181 RH+DA+TP G RP+ A Sbjct: 215 RHNDAFTPGGEFGHRPNHA----------------------------------------- 233 Query: 182 SVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTR 241 ++++ N R + I ++ WS Sbjct: 234 ---------VVVYSNLIRQTY---------KTTPIILGGVEASLRRLAHYDYWSDKMKRS 275 Query: 242 LDTPGKIDPIPHPYGEDLPC--ADNKPVAPKKQEAKAVTVQ--PPRPKPWEKTYVLLPSF 297 + D I + GE AD ++ + Y LLPS+ Sbjct: 276 ILMDSGADIISYGMGERSIVEIADALASGLSVRDITFIDGTVFRTDSLDEVYDYELLPSW 335 Query: 298 EKVKGDKVLYAHASRILHHETNPGCARALMQKHGD-RYVWINPPAIPLSTEEMDSVFALP 356 + ++ DK+ YA + ++ + +P R L++ + + ++ NPP +PL+T EMD V+ALP Sbjct: 336 DDLQADKLNYARSFKVQYENADPIRGRRLVEPYPNHQFAVQNPPTLPLTTAEMDEVYALP 395 Query: 357 YKRVPHPAYGN-ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEI 415 Y R HP+Y + +PA ++FS+ RGCFG CSFC++T H+GRI+ +RS +SI+ E Sbjct: 396 YARAWHPSYDDAGGVPALAEVKFSLASNRGCFGECSFCALTFHQGRIVSARSHESILAEA 455 Query: 416 EAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI 475 + P F G I D+GGPTA+ C C+ C+ P ICP M +H + Sbjct: 456 RDMIAD-PDFKGYIHDVGGPTADFRAPACDKQLKAGACKHRRCMTPHICPRMKVDHSDLV 514 Query: 476 NLYRRARDLKGIKKILIASGVRYDI--AVEDPRYIKELATHHVGGYLKIAPEHTEEGPLS 533 +L R+ R L G+KK+ + SG+R+D A DP +++EL HH+ G L++APEH + L+ Sbjct: 515 SLLRKLRALPGVKKVFLRSGIRFDYVVADSDPTFMRELCRHHISGQLRVAPEHVSDAVLA 574 Query: 534 KMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRL 593 M KP Y F L++ + + GK+Q+++PY +S+HPG+ ++ V LA + + + Sbjct: 575 AMGKPENSVYQEFISLYERENAKTGKKQFVVPYLMSSHPGSTLKEAVELAEYCRDLGYMP 634 Query: 594 DQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWP 653 +QVQ+FYP+P ST MYYTG +P E ++ PK + + +AL++Y DP N+ Sbjct: 635 EQVQDFYPTPSTISTCMYYTGVDP-----RTMEPIYTPKSAHDKAMQRALIQYRDPKNYD 689 Query: 654 LIRQALEAMGKKHLIGSRRDCLVPAPTIE 682 L+ +AL G+ LIG ++CLV + Sbjct: 690 LVVEALRRAGRTDLIGFGKNCLVRPRKKK 718 >UniRef50_C8QZ53 Radical SAM domain protein n=5 Tax=Deltaproteobacteria RepID=C8QZ53_9DELT Length = 606 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 242/652 (37%), Positives = 359/652 (55%), Gaps = 61/652 (9%) Query: 37 MDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGK 96 M Q GW++ D++LV+GDAY+DHPSFG+A+ GR LEA G+RV I+AQP + DDF+R G+ Sbjct: 1 MHQRGWETVDVVLVSGDAYIDHPSFGLALIGRWLEAHGYRVAILAQPRYDRPDDFLRFGR 60 Query: 97 PNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVA----------GKRPDRATLVYTQ 146 P LFFG++AGN+DS++ YT + ++R D Y+PD +RPDRAT++Y Q Sbjct: 61 PRLFFGISAGNLDSIVANYTGNVKVRDRDDYSPDGNPYFGGQAQRRFRRRPDRATIIYAQ 120 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 + + A VP+ILGG+EASLRR HYDY +R SVL D+KAD+L++G GER ++EVA Sbjct: 121 QARRACGQVPIILGGLEASLRRFVHYDYQQRKLRASVLTDAKADLLVYGMGERAVLEVAR 180 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 RL GE + + T + + Y E +P Sbjct: 181 RLEAGE---HLHGIAGTC------------------ERLTPAQLVARGYDESMP------ 213 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 A+A P R P + +LP +E++ DK + A R + + L Sbjct: 214 -------ARASAPDPERAGP--AHFKVLPGYEQIMVDKSHFLAAEREIDRQARARQPAML 264 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGC 386 +Q+ +++ +PPA PL EE+D ++ALPY R PHP R+PA+ M+R SV I+RGC Sbjct: 265 LQRQQAQWLLQHPPAAPLRPEELDRLYALPYARRPHPQA--GRVPAFTMVRDSVTIVRGC 322 Query: 387 FGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKS 446 G C+FC+IT H+G + SRS +SII E+ I P F G I+DLGGPTAN+Y C Sbjct: 323 CGNCAFCAITRHQGGRVVSRSRESIIAEVAQIA-QAPDFRGTITDLGGPTANLYG--CSC 379 Query: 447 PRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPR 506 R ++ C R C+YPD+C + + + + L + A + G++ +L++SG+R ++ ++ PR Sbjct: 380 SRRKEGCSRRDCLYPDVCRELRIDEDTLLELLQAAAAVAGVRHLLVSSGLRMELLLKTPR 439 Query: 507 YIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ----- 561 ++ L HH G LKIAPEHTE L M KP ++F + F+ + + + Sbjct: 440 LLRRLLEHHTPGTLKIAPEHTEPEVLRLMHKPDGSVLEKFVQTFNRLAAELARRSEKKPP 499 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 L PY ISAHPG M + L+K Q Q+F P+P +T +Y +G +P + Sbjct: 500 TLNPYLISAHPGCTMAHMEEMVRKLQKLNLVPRQFQDFTPTPGTLATAIYVSGLDPAS-- 557 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 V VPKGD++RR + +L ++ R A A +K + Sbjct: 558 ---GRPVHVPKGDQERRRQRLVLEQVTKSSAKPGRAARPASRRKAPATKPKR 606 >UniRef50_A7IB47 Radical SAM N-terminal domain protein n=7 Tax=cellular organisms RepID=A7IB47_METB6 Length = 640 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 231/703 (32%), Positives = 343/703 (48%), Gaps = 89/703 (12%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP + E G + DIILVTGDAYVDHPSFG A+ GR+L GF VGIIAQPD +++ Sbjct: 7 FLPRTPAEGRACGIEEFDIILVTGDAYVDHPSFGTALVGRVLWDAGFSVGIIAQPDATTE 66 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DF LG+P LFFG+++GN+DSM+N +T + + R D VY+ Sbjct: 67 KDFTVLGRPRLFFGISSGNVDSMVNNFTPNLKRRSSD-----------------VYSH-- 107 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 GGI RR +R + A+R+ Sbjct: 108 -----------GGIP----------------RRP---------------DRAAIVYANRV 125 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 P + I + ++ D R YG Sbjct: 126 HAAFPDTPIV-LGGIEASLRRFAHYDYWQDRVRQSILADAPADLLAYGMAEQQMVAIARR 184 Query: 269 PKKQEAKAVTVQPPRP----------KPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 E P + V +P F ++ DK YA A + + E Sbjct: 185 LDTGEPARAIRDIPGTCYTMEVAEWRATHPEGVVEIPGFSEISSDKTAYARAFALHYREQ 244 Query: 319 NPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRF 378 +P R + Q H + NPPA PLS +++D ++ LP+ R HP Y +PA E ++F Sbjct: 245 DPVRGRPVAQPHPKTVIVQNPPARPLSGDKLDHIYELPFSRRAHPLYKKP-VPALEPVQF 303 Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 SV RGCFG CSFC++T H+GRI+QSRS SI+ E+ + +P F G++ D+GGPTAN Sbjct: 304 SVVSHRGCFGSCSFCALTHHQGRIVQSRSAASIVREVTRMAA-MPEFKGIVQDVGGPTAN 362 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 MY + C+ C SC C + TNH P + + R+ ++ G+KK+ + SG+RY Sbjct: 363 MYGMACERWDGAGACPEKSC--SPACQTLRTNHRPLVEILRKISEVPGVKKVFVGSGIRY 420 Query: 499 DIAVEDP---RYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 D+ + D RY++ L HV G+LK+APEH M KP ++RF++ F + Sbjct: 421 DLVLADDLNSRYLETLCERHVSGHLKVAPEHISPRVTKAMNKPDGSVFERFRDRFTALQQ 480 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 K QYL+PYF+S HPG DMV LA +++ +QVQ+F P+P++ ST MYYTG Sbjct: 481 GKAKRQYLVPYFMSGHPGCTISDMVALAEYIRDRGLYTEQVQDFTPTPMSVSTCMYYTGL 540 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 +P + E V VPKG +++++ +ALL+Y +P N L+ + L G++ LIG+ + CL Sbjct: 541 DP-----FTLEPVHVPKG-REKKIQRALLQYREPQNRGLVFEGLRMAGREDLIGTGKQCL 594 Query: 676 VPA----PTIEEMREARRQNRNTRPALTKHTPMATQRQTPATA 714 V R+++ TRP + + +++ P + Sbjct: 595 VSGDVYLRRSRPGPVPRQKSSGTRPGGAAGSGTSRKKERPGSQ 637 >UniRef50_A5IK80 UPF0313 protein Tpet_0582 n=10 Tax=Thermotogaceae RepID=Y582_THEP1 Length = 567 Score = 596 bits (1537), Expect = e-169, Method: Composition-based stats. Identities = 214/631 (33%), Positives = 315/631 (49%), Gaps = 72/631 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP +REEM +LGW D+ILVTGDAYVDHPSFG+A+ G L + GF+VGIIAQPDW ++ Sbjct: 2 FLPTTREEMKKLGWRELDVILVTGDAYVDHPSFGVALIGHYLVSHGFKVGIIAQPDWRTE 61 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 D RLG+P LFFGVTAGN+DSM+ YTA ++ R D YTP GKRPDRAT+ Sbjct: 62 KDITRLGRPRLFFGVTAGNVDSMVANYTASKKKRKTDDYTPGGSGGKRPDRATI------ 115 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++ N + R Sbjct: 116 --------------------------------------------VYTN-------LIKRF 124 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGE--DLPCADNKP 266 P+ + ++ WS + K+D + + GE L A Sbjct: 125 FPEVPV--VLGGLEASLRRFAHYDWWSEKVRKSILIDSKVDLLVYGMGEKAVLEIAQILS 182 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 ++ K+V + + LPS++++ + YA A ++ T+P + Sbjct: 183 RTGDIEKCKSVRGVVWWSSQKPEGGIELPSYDEISENPEKYAEALKLQTWYTDPYKNILI 242 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMRG 385 QK RYV NPP +PLS EE+D ++ LP++R HP Y R+ A E ++FS+ +RG Sbjct: 243 YQKQDTRYVVQNPPQLPLSQEELDRLYLLPFEREVHPFYAKMGRVKAIETVKFSITAVRG 302 Query: 386 CFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCK 445 CFG CSFC++T+H+ + RS+DSI+ E+ + F G I+D+GGPTAN+Y C Sbjct: 303 CFGSCSFCALTQHQTTHVSYRSKDSILEEVRILTKK-KDFKGTITDVGGPTANLYGSSCS 361 Query: 446 SPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYD--IAVE 503 + C++ C+YP +C + NH+ I+L R + G++ + ++SG+R+D +A + Sbjct: 362 IRETKGQCQKF-CLYPSVCKIVRPNHDEFISLLESIRKIPGVRNVFVSSGIRHDFVLAEK 420 Query: 504 DPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYL 563 DP + G LK+APEH LS M KP + + FK F+T +K+ GK +Y+ Sbjct: 421 DPDVFIRELVKYTPGQLKLAPEHAHPKVLSLMRKPPVELFLEFKRRFETLAKKIGKRKYV 480 Query: 564 IPYFISAHPGTRDEDMVNLALW-LKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 I YFI HPG + L + LK + Q+Q F P+P ST MYY+G +P Sbjct: 481 IGYFIVGHPGEGWRENNYLRDFILKHLGYFPQQIQIFTPTPGTVSTAMYYSGLDP----- 535 Query: 623 YKSEDVFVPKGDKQRRLHKALLRYHDPANWP 653 + E V V + K R K + + Sbjct: 536 FTGEKVHVERSLKVRNKMKENVLFKKKGREK 566 >UniRef50_A1ALG7 UPF0313 protein Ppro_0556 n=9 Tax=Desulfuromonadales RepID=Y556_PELPD Length = 623 Score = 584 bits (1506), Expect = e-165, Method: Composition-based stats. Identities = 230/694 (33%), Positives = 338/694 (48%), Gaps = 79/694 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 F+P +R EM + GW+ D+I V GDAYVDHP+FG+ + R LE GFRVG+IAQPDW S Sbjct: 3 FIPTTRSEMHRRGWEQLDVIFVNGDAYVDHPAFGVPLLARWLEKHGFRVGVIAQPDWRSV 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + FM LG+P LFF +AG MDSM+ YTP Sbjct: 63 EPFMALGRPRLFFAASAGAMDSMVAH------------YTPA------------------ 92 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 R+ H D ++ R + R + RL Sbjct: 93 ------------------RKLRHDDAYTPGNRHGARPN------------RATLIYTSRL 122 Query: 209 AMG-EPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPV 267 + + ++ W L K D + + E + Sbjct: 123 KEAFRDVPVVIGGIEASLRRFAHYDYWENRVRRSLLFDAKADLLLYGMAER-SMLELAQR 181 Query: 268 APKKQEAKAVTVQP-----PRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGC 322 + + + + ++ +P FE+ D++ +A A R+ E NP Sbjct: 182 MGRGESLADIRGLRGTCWVEKAGHHLTDHLEIPCFEECGSDRLKFAEAFRLASREQNPYN 241 Query: 323 ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNI 382 R ++Q+HGDR + PP++PL EMDS++ALP+++ PHP+YG IPA+E IR S+ Sbjct: 242 GRTIVQRHGDRLLVCAPPSLPLEEAEMDSLYALPFEKAPHPSYGE-TIPAWEQIRCSITS 300 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 RGCFGGCSFC+I H+G++IQSR + S+ +EI + P F G ISD+GGPTANMY L Sbjct: 301 HRGCFGGCSFCAIAMHQGKLIQSRGQSSVESEIRELVRK-PWFRGSISDIGGPTANMYGL 359 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 C A + CRR SC++P C H+ + + L ARD G++ + ++SGVRYD+ Sbjct: 360 SCGDSAAMKCCRRESCLFPKQCRHLIVDDRRAVRLLHAARDFAGVRHVAVSSGVRYDLLE 419 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 P Y +EL HHVGG LK+APEH E M KPG+ ++RF F S++ GK Q Sbjct: 420 RQPAYCRELIAHHVGGLLKVAPEHLVERVTMLMRKPGLAVFERFLSRFREESRRLGKPQG 479 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 ++PY IS HPG DM+ LAL L++ R++QVQ+F P+P +T MYY+G +P Sbjct: 480 IVPYLISGHPGCSLADMLELALALQRLGLRVEQVQDFTPTPGTCATCMYYSGIDPE---- 535 Query: 623 YKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE 682 E ++V D+++ L KALL H P + +AL +G++ L ++ Sbjct: 536 -TGEKLYVATSDREKGLQKALLLGHLPGERKKVLEALALLGREELA-----TVLLTAGRS 589 Query: 683 EMREARRQNRNTRPALTKHTPMATQRQTPATAKK 716 E A+R + + + R + Sbjct: 590 EAVSAKRPHSVGQGVIHPGRERKAGRGKGTKKAR 623 >UniRef50_P61404 UPF0313 protein GSU2873 n=8 Tax=Proteobacteria RepID=Y2873_GEOSL Length = 605 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 246/649 (37%), Positives = 332/649 (51%), Gaps = 75/649 (11%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP++R E + GWD DI+ VTGDAYVDHP+FG+ + R LE GFRVGII QPDW S Sbjct: 3 FLPVTRGEALKRGWDELDIVFVTGDAYVDHPAFGVPLLARWLEFHGFRVGIIPQPDWRSC 62 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 + FM LG+P LFF V++G MDSM+ YTP Sbjct: 63 EPFMALGRPRLFFAVSSGAMDSMVAH------------YTPA------------------ 92 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 R+ H D ++ R + R + RL Sbjct: 93 ------------------RKLRHDDAYTPGNRHGARPN------------RATIVYTSRL 122 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 + + ++ D R +G Sbjct: 123 KEAYRDVPVV-IGGIEASLRRFAHYDYWEDKVRRSLLLDAKADLLVHGMGERPILELARR 181 Query: 269 PKKQEAKAVTVQPPRPK-------PWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPG 321 + E V LP FE+V D+ YA A R+L E NP Sbjct: 182 VRTGEPFQAIADIRGTAVVLGRGAAPPAGVVELPPFEEVAADRHRYAEAFRLLSREQNPH 241 Query: 322 CARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVN 381 CA L+Q+HGDR + NPPA PL E+DSV+ALP++R PHP++G IPAYE IR SV Sbjct: 242 CAHPLVQRHGDRTLLCNPPAYPLEEAELDSVYALPFQRAPHPSHGEP-IPAYEQIRASVT 300 Query: 382 IMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYM 441 RGCFGGCSFC+IT H+G++IQSRSE S++ E+E + + F G +SD+GGPTANMY Sbjct: 301 THRGCFGGCSFCAITHHQGKVIQSRSERSVLAEVERMAA-MAWFRGSVSDVGGPTANMYG 359 Query: 442 LRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIA 501 + C + R CRR SC+YP C ++ E L R R ++G++ + ++SG+RYD+ Sbjct: 360 VHCGNTRGGHACRRESCLYPSPCRYLAVGGERGAALLRAVRGVRGVRNVAVSSGIRYDLM 419 Query: 502 VEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQ 561 P Y +EL HHVGG LK+APEH M KPG S+DRF E F S + GK+Q Sbjct: 420 ERQPAYFRELVAHHVGGLLKVAPEHMVARVTDLMRKPGKESFDRFLERFRRESARLGKKQ 479 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 Y+IPY +S HPG +DMV LAL+LK+ R++QVQ+F P+P ST MY+TG +P Sbjct: 480 YIIPYLMSGHPGCTLDDMVELALFLKRAGLRVEQVQDFTPTPGTLSTCMYHTGLDP---- 535 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 + V VP+GD+++RL KALL +H P + AL A G++ + Sbjct: 536 -FAGAPVHVPRGDREKRLQKALLLWHLPTERRNVLDALRACGRESVARE 583 >UniRef50_Q729D8 Radical SAM domain protein n=12 Tax=Proteobacteria RepID=Q729D8_DESVH Length = 680 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 220/743 (29%), Positives = 328/743 (44%), Gaps = 102/743 (13%) Query: 23 CFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQ 82 FLPMSR EM +GWD+ D++L++GDAYVDHP+F A+ GR L A G+R GI+AQ Sbjct: 11 PLAQPRFLPMSRAEMHAIGWDALDVLLISGDAYVDHPTFAAALLGRWLVAHGYRTGIVAQ 70 Query: 83 PDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATL 142 P W++ +D + +G+P LF G+ AG +DSM+ YTA R+ RHDDAYTP AG RP+RA Sbjct: 71 PRWNTPEDVLCMGRPRLFAGIAAGAIDSMLAHYTAFRKKRHDDAYTPGGKAGARPNRA-- 128 Query: 143 VYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLV 202 ++++ N Sbjct: 129 ------------------------------------------------VIVYTN------ 134 Query: 203 EVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCA 262 + + G P+ + ++ A DS R YG Sbjct: 135 -LLRQAFAGLPVV----IGGIEASLRRATHYDFWTDSLRRSILLDAKADLLVYGMGEYAL 189 Query: 263 DNKPVAPKKQEAKAVTVQP---------------PRPKPWEKTYVLLPSFEKVKGDKVLY 307 + P + + LPS E + D L Sbjct: 190 REAAARYDAAMNEGGAATAAEALHGIGGTAWVGTESDMPEGASIMRLPSHEDISADVRLL 249 Query: 308 AHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN 367 A+ + G A A+ Q G R V + PPA P+S+E++D ++ALP+ R HP+Y Sbjct: 250 MEATLQQERHVHRGDAWAI-QPVGSRAVIMAPPAPPMSSEDLDRLYALPFTREAHPSYRE 308 Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 +PA +MIR S+ RGC GGCSFCS+ H+GR I SRS DS++ E + Sbjct: 309 -TVPAADMIRTSITTHRGCGGGCSFCSLALHQGRRIASRSRDSVLAEARDLAAAARKGV- 366 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 ISD+GGP+ANM+ RC A+ CRR SC++P +C + + L R RD G+ Sbjct: 367 SISDVGGPSANMWQARCTLNPAK--CRRASCMFPSVCKGFAVDQRKAVRLLREVRDTPGV 424 Query: 488 KKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFK 547 + + +ASGVR+D+A+ + ++ GG LK+APEH + L M KPG+ +++F Sbjct: 425 RNVRVASGVRFDLALREGEALRAYTMEFTGGQLKVAPEHICDEVLEYMRKPGLPVFEKFL 484 Query: 548 ELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANS 607 E F +S +AGKEQY++PY +SA PG D+ M L+ WL+ + QVQ F P+P + Sbjct: 485 EAFAAFSDEAGKEQYVVPYLLSAFPGCTDDHMRTLSRWLQARGWSPQQVQCFIPTPGTVA 544 Query: 608 TTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR--YHDPANWPLIRQALEAMGKK 665 T MY G +P + V + D +R +L P + + ++ Sbjct: 545 TAMYAAGIDPE------GNPIPVARTDAERLRQHGILMPDTGRPPSRDADNR-RRGDARQ 597 Query: 666 HLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL------------TKHTPMATQRQTPAT 713 G + R+ NR+ + + A Sbjct: 598 SETGRGKAGTRDGRPHRSDRDTGNANRHDGGRSDRRGGRRDEDRPDRGRRNGARPDGGAN 657 Query: 714 AKKASSTQSRPVNAGAKKRPKAA 736 +A + + R G KRP Sbjct: 658 RGRADAEERREGRKGGSKRPPRR 680 >UniRef50_Q58555 UPF0313 protein MJ1155 n=4 Tax=Methanocaldococcus RepID=Y1155_METJA Length = 603 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 224/653 (34%), Positives = 333/653 (50%), Gaps = 89/653 (13%) Query: 29 FLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSK 88 FLP ++EEMD+ GW+ DII+VTGDAY+DH FG ++ GR L G+RVGIIAQPDW + Sbjct: 2 FLPTTKEEMDEWGWEELDIIIVTGDAYIDHYLFGASVVGRYLVEHGYRVGIIAQPDWKNL 61 Query: 89 DDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRC 148 DD RLGKPN FF VTAGN+DSM+ YT +RLR D+ + + + KRPDRAT+ Sbjct: 62 DDIKRLGKPNYFFAVTAGNLDSMLAHYTPQKRLRDFDSMSNEGI-RKRPDRATI------ 114 Query: 149 KEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRL 208 ++ N + R Sbjct: 115 --------------------------------------------VYTN-------LIKRA 123 Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGE--------DLP 260 G PI+ ++ W + K D + + GE L Sbjct: 124 FKGVPIA--LGGIEASLRRFSHYDYWDNKVRKSVLIDSKADILMYGMGEKSILAITKALE 181 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP 320 +N V + LPS E+V K YA R L Sbjct: 182 SGENIKDLEINGTVVRVNERKIGDIKERYETKELPSHEEVVNSKEKYAEMHRKLM----- 236 Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSV 380 + + QK G++Y+ PP I L+ +EMD ++ +P++R HP+Y +P ++FSV Sbjct: 237 TMDKVIYQKVGNQYLVQFPP-IYLTEKEMDEIYEMPFERRAHPSYS--YVPGIVPVQFSV 293 Query: 381 NIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMY 440 RGCFGGCSFCSI H+G++IQ+RSE SI+ EI + + F GVI D+G PTANMY Sbjct: 294 VTHRGCFGGCSFCSILHHQGKVIQNRSERSILKEIRKLLNH-EDFKGVIQDIGAPTANMY 352 Query: 441 MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK-KILIASGVRYD 499 + CK A++ + C+YP+ C ++ NH+P I LYR+ RD+ G ++ + SGVRYD Sbjct: 353 RMGCKKGLADRCPKN--CLYPEPCENLIINHKPLIKLYRKIRDIVGDDVRVYVRSGVRYD 410 Query: 500 IAVEDPRY----IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 + + D Y IKEL+ +HV G LK+APEH + + KP + +F E + ++ Sbjct: 411 LIMYDEEYGEDYIKELSKYHVSGRLKVAPEHISKKVCKAIQKPDGRLFKKFLEKYREIAE 470 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + G + ++PY++ AHP ++M+ LA ++ K+ QVQ F P+P+ STTMY+TG Sbjct: 471 KVGGIKEVLPYWLIAHPNCSIKEMIELAEFIHKNNCYSRQVQVFTPTPMTLSTTMYHTGI 530 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 NP+ +E V+VP +++++ KA+ Y + NW + + +G K +I Sbjct: 531 NPI-----TNEKVYVPYTYREKKIQKAICLYREEENWEKALEGFKMVGYKGVI 578 >UniRef50_Q0STL9 UPF0313 protein CPR_1216 n=60 Tax=cellular organisms RepID=Y1216_CLOPS Length = 662 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 218/728 (29%), Positives = 343/728 (47%), Gaps = 93/728 (12%) Query: 28 PFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSS 87 FLP+ +++M + GW+ CD +LVT DAY+D F II+ Sbjct: 5 KFLPICKDDMIERGWEQCDFVLVTADAYID--------------HHSFGTAIIS------ 44 Query: 88 KDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQR 147 L G+ A +PD ++ ++ Sbjct: 45 ----RVLENAGYKVGIIA------------------------------QPDWKSVDDFKK 70 Query: 148 CKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERP----LVE 203 V G ++ HY S +R+ L K + G+RP +V Sbjct: 71 LGRPRLGFLVNGGNMDP---MVNHYTV-SKKLRKKDLYTPKGE-----MGKRPDRATIVY 121 Query: 204 VAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPC-- 261 + ++ + ++ W + D + + E Sbjct: 122 CNKIREAYKDVNIVIGGIEASLRRFAHYDYWDNKVRKSILVDSGADLLVYGMSEKQIVEV 181 Query: 262 ADNKPVAPKKQEAKAVTVQPPRPKPWEK---TYVLLPSFEKVKGDKVLYAHASRILHHET 318 AD + + + ++ +++LPSF+ V DK YA +I + E Sbjct: 182 ADFLNQGFDGKYIRHIPGTCYIADSLDEIYEEHIVLPSFKDVSSDKRTYAECFKIQYDEQ 241 Query: 319 NPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIR 377 +P R L+Q+H +YV IN P +PLS EE+D V+ALPY++ HP Y I A E ++ Sbjct: 242 DPVRGRTLVQEHNGKYVVINKPEMPLSREELDRVYALPYQKTYHPIYEKDGGIAAIEEVK 301 Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 FS+ RGC G CSFC+IT H+GRI+ SRSEDSI+ E E I F G I D+GGPTA Sbjct: 302 FSLVSSRGCSGNCSFCAITFHQGRIVTSRSEDSIVEEAEEI-TKYDDFKGYIHDIGGPTA 360 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 N CK C+ C+ P IC +M+ +H ++L RR R L GIKK+ I SG+R Sbjct: 361 NFRKPACKKQLTLGACKHKRCMSPGICKNMEVDHREYLHLLRRVRKLPGIKKVFIRSGLR 420 Query: 498 YD--IAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 YD +A +D + KEL HHV G LK+APEH L M KP +YD F+ F ++ Sbjct: 421 YDYIMADKDDTFFKELVEHHVSGQLKVAPEHVSPNVLKYMGKPAGKTYDEFRRKFFKITE 480 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + GK+Q++IPY +S+HPG + ED + LA +L+ ++ +QVQ+FYP+P STTM+YT Sbjct: 481 RLGKKQFIIPYLMSSHPGCKLEDAIMLAEYLRDINYQPEQVQDFYPTPGTLSTTMFYTEL 540 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 +PL E+V++P+ +++ + +ALL++ +P N+ ++ AL G++ LIG+ CL Sbjct: 541 DPL-----TMEEVYIPRSKEEKAMQRALLQFKNPKNYNIVYDALVKAGREDLIGNGPKCL 595 Query: 676 V-----------PAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRP 724 + + R++R +N R + K +++Q + +S+ Sbjct: 596 IRDKNSFGKGNNHSNHKSGGRKSRNENSGRRESEDKKRSSHSKKQR-GNKSRGFDQKSQR 654 Query: 725 VNAGAKKR 732 V+ G K+R Sbjct: 655 VSKGKKRR 662 >UniRef50_D1J9C3 Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9C3_9ARCH Length = 499 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 158/600 (26%), Positives = 270/600 (45%), Gaps = 105/600 (17%) Query: 46 DIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTA 105 +II VTG+ ++DHP G+AI R+LE +G+++G+I +P + +++ +LG+P LFFGV++ Sbjct: 4 EIIFVTGEIFLDHPLCGVAILKRVLEKEGYKIGVIEKP--TKEEEIRKLGRPKLFFGVSS 61 Query: 106 GNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEAS 165 G++DSM+ YT ++ R +D + DRAT V++ K ++ Sbjct: 62 GSIDSMVRNYTPLKKSRAEDE--TQDYHEVVLDRATTVFSNWIKHQFRGS---------- 109 Query: 166 LRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAI 225 +L+ G E ++ Sbjct: 110 -------------------------ILVLGGTE------------------------ASL 120 Query: 226 IVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPK 285 W + + D I + E + + K Sbjct: 121 RRFVHYDYWQNRLRKPILFDTRADIISYGNSEKQI-LEIAERLKNDLPLYDIPGTCIITK 179 Query: 286 PWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLS 345 T LP++E++ +K + +L L+QK +RY+ + + Sbjct: 180 EKVNTAKELPNYEELMNEKERFCDMQNMLT------NTEDLIQKIDNRYLLQ-YKSPKYT 232 Query: 346 TEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQS 405 T+++D + L + R FSV RGC G C+FCS+ +G I S Sbjct: 233 TKDLDEYYELKFTRELPKELSG--------FEFSVITHRGCIGDCNFCSVNLIQGDKIIS 284 Query: 406 RSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICP 465 RSE+SI+ EI+AI +P FTG I DLGGP+ANMY + C + SC+ C Sbjct: 285 RSEESILREIKAI-TKLPHFTGNIDDLGGPSANMYGMDCNKCNS-------SCI---DCN 333 Query: 466 HMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPE 525 +D +++ + L R+ R ++G+KK+ I SG+R+D+ P YI+E+ +H+ ++IAPE Sbjct: 334 VLDRSNKRMVGLLRKVRKVEGVKKVNIRSGIRFDLTT--PEYIEEITKYHLFNTVRIAPE 391 Query: 526 HTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALW 585 H + L M K G +F F +++ L YF++AHPG+ ++ LA Sbjct: 392 HVNKNVLKLMNK-DKGDLKKFMLEFKKTNRK------LSFYFMTAHPGSTMKEAKELARA 444 Query: 586 LKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 +K+ + + VQ F P+P+ ST MYYTG +P + ++VP +++ K ++ Sbjct: 445 IKRLK-NAESVQIFTPTPMTVSTCMYYTGMDP-----KTKKKIYVPYTYSEKKEQKRIIF 498 >UniRef50_B0TIH7 Radical sam protein, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TIH7_HELMI Length = 339 Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 157/340 (46%), Positives = 206/340 (60%), Gaps = 48/340 (14%) Query: 27 APFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWS 86 APFLP+S+ EM++LGWD+CD ILVTGDAYVDHPSFG AI GR+LE +G+RVGII+QPDW Sbjct: 7 APFLPLSKAEMNELGWDACDFILVTGDAYVDHPSFGAAIIGRVLENRGYRVGIISQPDWR 66 Query: 87 SKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQ 146 F LG+P L + VTAGN+DSM+N YTA ++ R +DAY+P AG RPDRA+LVY Sbjct: 67 DLRSFKVLGRPRLAWLVTAGNLDSMVNHYTAAKKRRSEDAYSPGGRAGLRPDRASLVYAH 126 Query: 147 RCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAH 206 RC+EA+K+ P+ILGGIEASLRR AHYDYW D VRRSVLVD+KAD+L+FG GE P+ +A Sbjct: 127 RCREAYKEPPIILGGIEASLRRFAHYDYWEDRVRRSVLVDAKADLLVFGMGEEPITALAE 186 Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 L+ E A Sbjct: 187 ELSRRRSGEEFMHPLG---------------------------------------AKTAG 207 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 V + A+ + P ++LP +++V DK YA A ++ E NP + L Sbjct: 208 VCYLTSDLAAIPGEAP---------IVLPGYDEVASDKWAYAKAFQVQEREQNPVDGKTL 258 Query: 327 MQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG 366 Q HG+ ++ N PA PL+T+EMD+++ALP+ R PHP+Y Sbjct: 259 AQPHGELFLVQNRPARPLTTKEMDAIYALPFARRPHPSYE 298 >UniRef50_D1TTB0 Conserved domain protein n=10 Tax=Yersinia RepID=D1TTB0_YERPE Length = 270 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 170/223 (76%), Positives = 187/223 (83%) Query: 516 VGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTR 575 +GGYLKIAPEHTEEGPLSKMMKPGMGSY RFKELFDTYSKQAGKEQYLIPYFISAHPGT Sbjct: 1 MGGYLKIAPEHTEEGPLSKMMKPGMGSYQRFKELFDTYSKQAGKEQYLIPYFISAHPGTE 60 Query: 576 DEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDK 635 D+DMVNLALWLKK+RFRLDQVQNFYPSPLANSTTMYYTGKNPLAK+ YKSE+V VPKGD+ Sbjct: 61 DKDMVNLALWLKKNRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKVDYKSEEVVVPKGDR 120 Query: 636 QRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTR 695 QRRLHKALLRYHDPANWP++R ALE MG +HLIG+RR+CLVPAPT+EE REARR R+ Sbjct: 121 QRRLHKALLRYHDPANWPMLRSALEDMGLQHLIGARRECLVPAPTLEEQREARRALRHHT 180 Query: 696 PALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVG 738 PALTKHT + QRQ A AS+ + P A + Sbjct: 181 PALTKHTSITRQRQPSNRAPAASAGKKAPTVANGTSSAHSTSA 223 >UniRef50_A5D2K1 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Clostridia RepID=MIAB_PELTS Length = 448 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 114/371 (30%), Gaps = 60/371 (16%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 + E +R V IM GC C++C + GR +SRS +++ E+ + GF Sbjct: 138 EELPVKRKEGVRAWVTIMYGCNNFCTYCIVPYVRGRE-KSRSPEAVYEEVARLA--GEGF 194 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 VI L G N Y +L ++ Sbjct: 195 KEVI--LLGQNVNSYGKDLGVK------------------------TDFASLLESLENID 228 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDR 545 GI +I + D ++ I A+ V + + + L KM + + + Sbjct: 229 GIDRIRYMTSHPRDFSLRLVEAIA--ASKKVCEHFHLPVQAGSNRILKKMNRG--YTREE 284 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 + +L Y K + + PG DED + +++ RF + P Sbjct: 285 YVDLI-RYIKSLIPHATVTTDIMVGFPGETDEDFNDTLDLVREIRFDSAYTFVYNIRPGT 343 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKK 665 + M V + K+ R+ AL++ + + + Sbjct: 344 PAAEM----------------PDQVAENVKKERIQ-ALIKLQNKISLERNEEE------- 379 Query: 666 HLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPV 725 +G ++ LV +NR + + P + P T A + Sbjct: 380 --VGQTQEVLVEGEKDRGSGFIYGRNRGNKTVIFSGDPSLVGKVVPVTVTGARLAHLTGI 437 Query: 726 NAGAKKRPKAA 736 + + + Sbjct: 438 LSYNYHQEGSR 448 >UniRef50_C7LY00 RNA modification enzyme, MiaB family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY00_ACIFD Length = 487 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 97/356 (27%), Gaps = 27/356 (7%) Query: 359 RVPHPAYGNARIP-------AYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSI 411 R P P P + E R V I GC C+FC + G SR D+I Sbjct: 127 REPEPGSVGLDDPTPWGEAVSEEPWRAWVTIQVGCDNRCAFCIVPRVRGPE-ASRPFDAI 185 Query: 412 INEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNH 471 + E+ + L G N Y R Sbjct: 186 VAEVRELAARGVSEV----TLLGQNVNSYGRDLVLAMRRAEDERERAQVASRSGVAFLGQ 241 Query: 472 E------PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPE 525 +L R + GI+++ S D+ E + + E T V L + Sbjct: 242 GVPRVRPLFADLVRAVGAVPGIRRVRFTSPHPKDMRTETFQAMAE--TPTVCESLHFPLQ 299 Query: 526 HTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALW 585 + L+ M + DRF ++ + + I PG D D Sbjct: 300 SGSDRILAAMHRGYSA--DRFLAKLAE-ARATIDDLAVSTDIIVGFPGETDADFEATLEV 356 Query: 586 LKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 + F L + P P + + +P V V + + R Sbjct: 357 AAEAAFDLAYTFIYSPRPGTEAAALVDRFVDPDVVHERFDRLVRVTERSAAAAHRARVGR 416 Query: 646 YHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKH 701 LI + +R+ LV P ++ R R H Sbjct: 417 ----DEEILIEGPSRKDPRTATARTRQHKLVHIPGLDARALGGRYGRARIVDARAH 468 >UniRef50_A5UUG7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Chloroflexi (class) RepID=MIAB_ROSS1 Length = 476 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 79/501 (15%), Positives = 149/501 (29%), Gaps = 81/501 (16%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHAS 311 Y + C N + + + A P +P + ++++L S + ++ + S Sbjct: 27 RYYVWTVGCQMNVSDSERLEAALQGVGYAPAERPEDASFIVLNSCSVRASAEERILGKLS 86 Query: 312 RILHHETNPGCARALMQKH----GDRYVWINP-PAIPL--STEEMDSVFALPYKRVPHPA 364 + + + ++ G++ ++ + P + S +D V AL P+P Sbjct: 87 EVQRLKRKHPDTKVVLWGCMVGPGNQSIFQSRLPMVDHFVSPSAVDEVLAL----APNPI 142 Query: 365 YGNA----RIPAYEMIRFSVN--IMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 Y + ++ SV+ I GC CSFC I GR +SR D I+ E I Sbjct: 143 YQLEEPALPVARWDHPPVSVHVPIQYGCNMSCSFCVIPLRRGRE-RSRPLDEIVEECRRI 201 Query: 419 RDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLY 478 L G + + +L Sbjct: 202 VARGAKEI----TLLGQIVDSWGHDL------------------------PGRPDLADLL 233 Query: 479 RRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP 538 R D+ G+ ++ + + + EL + + + ++ L M + Sbjct: 234 RAVHDIPGLLRLRFLTSHPAWMTDRLIAAVAELPRCM--PDINLPVQAGDDALLKIMRRG 291 Query: 539 GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQN 598 + R+++L + A + L I HPG E L+ RF + Sbjct: 292 --YTVQRYRDLIAKI-RDAIPDVSLTTDVIVGHPGETRERFEGTKRLLEDIRFDKVHIAA 348 Query: 599 FYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQA 658 F P + M +P VP+G+KQ R +++ Sbjct: 349 FSSRPGTRAADM---ELDPTLA---------VPEGEKQLR----------RIELERLQEQ 386 Query: 659 LEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKAS 718 + A + + LV + R P T A+ Sbjct: 387 IAAERNARFLHQTVEVLVEGEHKG-------KWRGRTPGNKLVFFSDPDDWTGRLARVII 439 Query: 719 STQSRPVNAGAKKRPKAAVGR 739 + G R R Sbjct: 440 THTGPWSLQGVLARSDETFAR 460 >UniRef50_C6M658 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M658_NEISI Length = 496 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 65/382 (17%), Positives = 117/382 (30%), Gaps = 73/382 (19%) Query: 348 EMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRS 407 E++ LP R E V+IM GC CSFC + G SR Sbjct: 186 EIEKFDHLPPAR-------------VEGGAAFVSIMEGCSKYCSFCVVPYTRGEEF-SRP 231 Query: 408 EDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHM 467 + ++ EI + +L G N Y + Sbjct: 232 LNDVLTEIANLAQQGVKEI----NLLGQNVNAYRGEMEDGEIC----------------- 270 Query: 468 DTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHT 527 L R ++ GI+++ + + ++L + +L + + Sbjct: 271 -----DFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDL--PKLVSHLHLPIQSG 323 Query: 528 EEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLK 587 + LS M + + +K + + + L FI PG + + +K Sbjct: 324 SDRVLSAMKRG--YTALEYKSIIRKL-RAIRPDLCLSSDFIVGFPGETEREFEQTLKLVK 380 Query: 588 KHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYH 647 F L V + P P + + P +K RRL Sbjct: 381 DIAFDLSFVFIYSPRPGTPAANL----------------PDDTPHAEKVRRL-------- 416 Query: 648 DPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQ 707 + +A A + +IG+ + CLV + ++ + + + N R TP Sbjct: 417 --EALNEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTANNRVVNFTGTPDMIN 474 Query: 708 RQTP--ATAKKASSTQSRPVNA 727 + T S + +PV A Sbjct: 475 QMIDLEITEAYTFSLRGKPVEA 496 >UniRef50_A3DDI9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_CLOTH Length = 480 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 105/344 (30%), Gaps = 60/344 (17%) Query: 370 IPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVI 429 I + ++ V +M GC C++C + GR +SRS D I+ E+ + GF + Sbjct: 182 IERKDGVKAWVTVMYGCNNFCTYCIVPYVRGRE-RSRSMDDILEEVRML--GRQGFKEI- 237 Query: 430 SDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKK 489 L G N Y + L R + GI++ Sbjct: 238 -TLLGQNVNSYGKDIG------------------------DGTSFAELIREVNKIPGIER 272 Query: 490 ILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 I + D++ + +++ V +L + + L M + + + + L Sbjct: 273 IRFTTSHPKDLSDDLIYAMRD--CEKVCEHLHLPFQAGSTRILKLMNR--KYTKEDYINL 328 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 + + L I PG +ED + L+K RF + + Sbjct: 329 VAKIKENI-PDIALTTDIIVGFPGETEEDFSDTLDILEKVRFDNAYTFLYSKRTGTPAAK 387 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 M + VP+ K+ R + LL + + + +G Sbjct: 388 M----------------EDQVPEEVKKERFQR-LLETQNRISKEI---------NDTFLG 421 Query: 670 SRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPAT 713 + LV + + + R + + + Sbjct: 422 KVVEVLVEGVSKTNDKIFTGRTRGNKVVNFEADASLIGKLVNVR 465 >UniRef50_Q67NX5 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Clostridiales RepID=RIMO_SYMTH Length = 485 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 62/337 (18%), Positives = 99/337 (29%), Gaps = 54/337 (16%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 R+ A + I GC C+FCSI GR +SR +SI++E + Sbjct: 154 ERVLATPGYTAYLKIAEGCDCACAFCSIPLMRGRH-RSRPIESIVDEARRLAGMGVRELV 212 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 VIS Y L L R + GI Sbjct: 213 VIS----QDTTYYGLDLYRK------------------------PMLARLLRELAQVDGI 244 Query: 488 KKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS-YDRF 546 + I I I E I + V YL + +H L M +P Y R Sbjct: 245 RWIRIHYSYPTRITDELIEVI--VTEPKVLNYLDLPLQHGSNRVLRIMNRPANAEGYLRL 302 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 + FI+ HPG +ED L +L+ F V + Sbjct: 303 VQKLRERVPDICLRST----FIAGHPGETEEDFELLLDFLRACEFDHVGVFAYSQEEGTK 358 Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDP----ANWPLIRQALEAM 662 + M E+V + + D+ + + + R + ++ + Sbjct: 359 AGQM-----------EQLPEEVRLARRDRAMEVQQEIARRRNQLQVGRELEVLVEGRSPQ 407 Query: 663 GKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT 699 G+ +G C +P I+ + R Sbjct: 408 GRGWFVG---RCYGQSPGIDGVVLFRAPAGAELKPGD 441 >UniRef50_B3TCC0 Putative uncharacterized protein family UPF0004 n=2 Tax=environmental samples RepID=B3TCC0_9ARCH Length = 472 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 69/515 (13%), Positives = 152/515 (29%), Gaps = 67/515 (13%) Query: 218 RDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGE--------DLPCADNKPVAP 269 R + + +K+ G DT + H + DL + + Sbjct: 13 RAIPLQSFHMKQVYLDTFGCQMNVADTDRMELVLFHSGYQRTLEKEDADLILVNTCSIRE 72 Query: 270 KKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHE--TNPGCARALM 327 K ++ +P ++L G + R+ + + P + Sbjct: 73 KAEQKTFSLFGGLKPLKMANPDLIL-GLTGCLGQQEGEKLLKRMPYLDFVIGPDQVEGIA 131 Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 Q V + + + V+++P +P VNI++GC Sbjct: 132 QAVDR--VRNTGKTFVWTGFDQEKVYSIPELSR--------DLPKAPGPSAFVNIIKGCD 181 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 C+FC + GR +SR + + EI + + +I L G N Y R Sbjct: 182 KFCTFCVVPFTRGRE-KSREPEELFEEIRHLVNHGA--KEII--LLGQNVNSYGKRGLKK 236 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 P L ++ G++++ + D + R Sbjct: 237 PV-----------------------PFHELLYGIAEIPGVQRLRFTTSHPNDFTRDTIRA 273 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYF 567 ++L +L + + L M + + + + +L + L Sbjct: 274 YRDLDILM--NHLHLPVQSGNNQMLKAMRRD--HTIEEYLDLLAELKSEV-PGISLSTDI 328 Query: 568 ISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSED 627 I PG DE + +++ + + + P P + + + P + ++ Sbjct: 329 IVGFPGETDEAFGDTLKIMEEVGYSSSFMFAYSPRPGTPANEL--SDSVPEETKKRRLQE 386 Query: 628 VFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPA--PTIEEMR 685 + + + ++ ++ + N ++ + G+ G P + Sbjct: 387 IIALQSRQTKQQGQSFI----GKNVEVLIE-----GRSSKPGYVYKGRNPQYWNVNIQGG 437 Query: 686 EARRQNRNTRPALTKHTPMATQRQTPATAKKASST 720 E Q T L K + T + + A Sbjct: 438 EGILQAGETVTVLVKQVSGHSLNGTTSHRRAAGGR 472 >UniRef50_Q9VGZ1 CDK5RAP1-like protein n=27 Tax=Eukaryota RepID=CK5P1_DROME Length = 583 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 57/350 (16%), Positives = 109/350 (31%), Gaps = 40/350 (11%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 E V+IMRGC C++C + GR +SR SI+ E++A+ + L Sbjct: 239 ESPTAFVSIMRGCDNMCTYCIVPFTRGRE-RSRPLASIVAEVKALAEQGVKEV----TLL 293 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y R + + + T P L R +I Sbjct: 294 GQNVNSYRDRTAQEEQDSLKATPVPGFSTVYK-PKTGGTPFAALLRSVAQAVPDMRIRFT 352 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG-MGSYDRFKELFDT 552 S D + E I++ +V L + + L +M + +Y + Sbjct: 353 SPHPKDFSDEVLEVIRD--HPNVCKQLHLPAQSGNTQVLERMRRGYSREAYLELVQHIRQ 410 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 + G L FI G +E+ + +++ ++ + + + + Y Sbjct: 411 FLPNVG----LSSDFICGFCGETEEEFQDTVSLIQQVQYNVAYLFAYSMREKTTAHRRY- 465 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 VP K RL + + + R+ + +K + Sbjct: 466 --------------KDDVPINVKNERLQRMV---------QVFREGATQLHRK---MEGQ 499 Query: 673 DCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQS 722 + L+ + +A RN + +TA+K+ Sbjct: 500 EQLILIEGKSKRSDAHWFGRNDANIKVIVPSIYVPISGDSTARKSFGVGD 549 >UniRef50_C9KIQ8 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KIQ8_9FIRM Length = 444 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 51/340 (15%), Positives = 109/340 (32%), Gaps = 61/340 (17%) Query: 369 RIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV 428 + + V IM GC C++C + GR +SR + I++E+E Sbjct: 146 PVARAGSLSAWVPIMYGCNNFCTYCIVPYVRGRE-RSRLPEDIVHEVEEAVKNGYEEV-- 202 Query: 429 ISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK 488 L G N Y K +L + + GI+ Sbjct: 203 --TLLGQNVNSYGKDHKL-------------------------ADFADLLKMVDKVPGIR 235 Query: 489 KILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKE 548 ++ + D++ + I++ H+ ++ + ++ L M + + + + +++ Sbjct: 236 RVRFMTSHPKDLSDKVIAAIRD--GEHLCEHIHLPVQYGSNRILKAMNR--VYTVESYRD 291 Query: 549 LFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANST 608 L + L I PG DED + +L++ R+ + + Sbjct: 292 LVRRIRAAI-PDVSLTTDLIVGFPGETDEDFQQMLDFLREIRYDSAYTFIYSKRSGTPAA 350 Query: 609 TMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 TM + V + K+ RL+ + ++ + + L+ Sbjct: 351 TM----------------ENQVDESVKKERLNALMA----------VQNEISLAINEKLL 384 Query: 669 GSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 G + +V P+ E + R + L H Sbjct: 385 GKTLEIMVEGPSKNEPSVWMGRTRTNKIVLFAHAGEKPGD 424 >UniRef50_B7APT3 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7APT3_9BACE Length = 460 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 53/300 (17%), Positives = 105/300 (35%), Gaps = 34/300 (11%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 H E R + + GC CS+C I GR ++SR + + E+ + + Sbjct: 130 HEYEELNIYDVCEHTRAYIKVQDGCNQFCSYCIIPYTRGR-VRSRRPEDVTAEVRRLVEK 188 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 G+ I L G + Y + ++P E R + + + L Sbjct: 189 --GYKEFI--LAGIHLSSYGIDFEAPCDEAVDYRAA----------NMPGSRLLELIEAV 234 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKM-MKPG 539 ++G+K++ + S ++ + ++K +A V + I+ + + L +M + Sbjct: 235 CSVEGVKRLRLGS---FEPRILTEAFVKRMAELEPVCPHFHISLQSGCDATLKRMNRRYT 291 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 Y+ +L Y A + I P DE+ +L++ F V + Sbjct: 292 ADEYEESCKLLRKYFPNAA----ITTDVIVGFPQETDEEFAITKEYLERIHFYEMHVFKY 347 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQAL 659 + M G+ P E V + L K + R + + I++ L Sbjct: 348 SRRKGTAADRM--DGQVP--------EPVKTARSAGLLELEKRMSREYRESALGSIQEVL 397 >UniRef50_B9MJU1 tRNA-i(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridia RepID=B9MJU1_ANATD Length = 471 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 100/335 (29%), Gaps = 68/335 (20%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P + A+ VNI+ GC CS+C + GR +SR + II EIE + Sbjct: 174 PTARRQGVSAF------VNIIYGCNNFCSYCIVPYVRGRE-RSRRPEEIIYEIEQLAQNG 226 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 L G N Y N L + Sbjct: 227 IKEV----TLLGQNVNSYGKDLG------------------------NSITFPKLLEKVN 258 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMG 541 ++KGI++I + D++ E +++L V ++ + + L M + Sbjct: 259 EIKGIERIRFVTSHPKDLSDELIVAMRDL--EKVCEHIHLPVQSGSTRILKAMNRHYTKE 316 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 Y R E T + I PG DED + +K F + Sbjct: 317 DYLRLVEKLKTNIPDIA----ITTDIIVGFPGETDEDFEDTLDVCRKVEFDSAYTFIYSK 372 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA 661 + M VP K +R + + L+ + Sbjct: 373 RRGTPAEKM----------------PNQVPDDIKYQRFQRLV---------KLVEEIALK 407 Query: 662 MGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRP 696 ++ ++G + L+ + + A R N Sbjct: 408 KNRQ-MLGKTYEILIDSHSKRNNLLAGRTRTNKVV 441 >UniRef50_A0QIR4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=174 Tax=Actinobacteria (class) RepID=MIAB_MYCA1 Length = 715 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 106/336 (31%), Gaps = 55/336 (16%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 V+I GC C+FC + G+ + RS D I+ E+ ++ L G Sbjct: 175 AWVSISVGCNNSCTFCIVPSLRGKEV-DRSPDDILAEVRSLVADGVLEV----TLLGQNV 229 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 N Y + P + + L R ++ G++++ S Sbjct: 230 NAYGVSFAD------------------PALPRDRGAFARLLRACGEIDGLERVRFTSPHP 271 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 + + + + T +V L + + + L M + +R+ + D + A Sbjct: 272 AEFTDDVIEAMAQ--TPNVCPALHMPLQSGSDRVLRAMRRSYRA--ERYLGIIDRV-RAA 326 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 + I PG +ED +++ RF + P + + Sbjct: 327 MPHAAITTDLIVGFPGETEEDFAATLDVVRRARFAAAFTFQYSKRPGTPAAEL------- 379 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 D +PK Q R + + +++++ G + L+G + LV Sbjct: 380 ---------DGQIPKAVVQERYERLV----------ELQESISLQGNQALVGQTVELLVA 420 Query: 678 APTIEEMREARRQNRNTRPALTKHTPMATQRQTPAT 713 + R + R H A R P Sbjct: 421 TGEGRKDSATARMSGRARDGRLVHFA-ADDRVRPGD 455 >UniRef50_Q24X58 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=11 Tax=Clostridiales RepID=MIAB_DESHY Length = 447 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 65/465 (13%), Positives = 132/465 (28%), Gaps = 78/465 (16%) Query: 245 PGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDK 304 P K+ + + AD ++ T + S E K Sbjct: 7 PKKVVTLAYGCQMSERDADTLTEISSQKGYVRSQELEQADLIIVNTCCVRESAENKILGK 66 Query: 305 VLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPA 364 + + + + + ++Q+ G P + ++R+ A Sbjct: 67 IGELKHLKEANPQLKIAISGCMVQQPGALERL--RKRAPHVDIWAGTHNIHEFQRLLEEA 124 Query: 365 YGNARIPA-YEMIR---------------FSVNIMRGCFGGCSFCSITEHEGRIIQSRSE 408 ++ +E R VNI GC C++C + GR +SR Sbjct: 125 EEKGKVAEVWEKPRETQESVLLAAKGKLKAYVNISYGCNNFCTYCIVPHVRGRE-RSRQP 183 Query: 409 DSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMD 468 + I+ EI A+ +T L G N Y Sbjct: 184 EEILAEIRALVETGCREV----TLLGQNVNSYGQDLDRAY-------------------- 219 Query: 469 TNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTE 528 +L + + G+ ++ + D++ + I A H+ ++ + + Sbjct: 220 ----DFADLLKDVDSIDGLWRVRFMTSHPKDLSDKLIETIA--AGTHLCEHIHLPFQAGS 273 Query: 529 EGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKK 588 + L M + Y + K + L I PG +ED +++ Sbjct: 274 DEILKGMNRKYTREY--YLSRIAQI-KVIIPQVSLTTDIIVGFPGETEEDFEQTLELIRQ 330 Query: 589 HRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHD 648 R+ + + M +P K+RRL + + Sbjct: 331 VRYSQAFTFMYSKRSGTPAAQMAE----------------QIPLDIKKRRLQQLIT---- 370 Query: 649 PANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRN 693 ++ A ++ +IG + LV P+ + R Sbjct: 371 ------VQNAQSLAWRQEMIGKTCEVLVEGPSKSNPDRLTGRTRG 409 >UniRef50_B9KY11 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacteria RepID=B9KY11_THERP Length = 458 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 70/449 (15%), Positives = 144/449 (32%), Gaps = 83/449 (18%) Query: 248 IDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVL 306 + + + + C N+ + K P + W+ V++ + + + + Sbjct: 17 VPGVKRFHIWTIGCQMNEAESAKAAALLRQAGYVPAVREWDADIVIVNTCVVRQQAEDKA 76 Query: 307 YAHASRILHHETNPGCAR---------ALMQKHGDRYVWINPPAIP--------LSTEEM 349 + + + R ++ +R+ W++ P L E Sbjct: 77 LGYIGALARLKRRRPDVRIAVTGCLVTGQERRLAERFPWVDLWYGPSEFERLVSLVPELA 136 Query: 350 DSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSED 409 D L +PH Y + A + V ++ GC CS+C + GR +SR + Sbjct: 137 DVDIDL--VELPH-YYDEGQ--ADPEVTAFVPVIYGCNFVCSYCIVPYRRGRE-RSRPVE 190 Query: 410 SIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDT 469 ++ E+E + L G T N Y Sbjct: 191 QVVAEVEKLAARGVREV----TLLGQTVNAYGHDL------------------------P 222 Query: 470 NHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEE 529 +L R D+ GI++I + + + R + +L V ++ + + + Sbjct: 223 GQPDLADLLERVHDVPGIERIRFLTSHPKYFSDKLIRAVADL--PKVCEHVNLPVQSGDN 280 Query: 530 GPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKH 589 L +M + + + ++E ++ + L I PG +E +N L++ Sbjct: 281 EVLRRMRRH--YTVEEYRERIARI-RELIPDVTLSTDIIVGFPGETEEQFLNTYRLLEEI 337 Query: 590 RFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDP 649 RF V + P P S VP+ +K+RR H+A+ + + Sbjct: 338 RFDKVHVAMYSPRPGTLSARW----------------PDDVPREEKRRR-HRAVEQLQER 380 Query: 650 ANWPLIRQALEAMGKKHLIGSRRDCLVPA 678 + +G + LV Sbjct: 381 IARE---------RNERYVGRTVEILVDG 400 >UniRef50_Q3ACX5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=RIMO_CARHZ Length = 438 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 73/453 (16%), Positives = 145/453 (32%), Gaps = 66/453 (14%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 L C N+ + P E +++ + + L H Sbjct: 8 LGCTKNQADSEVIMGILESKGYVRSLNPEESDLLIVNTCGFIAAAIEESIEEILNLVHLK 67 Query: 319 NPGC----ARALMQKHGDRYVWINPPAIPL-STEEMDSVFALPYKR-------VPHPAY- 365 PG A L+Q+ G P + E++++ L + P + Sbjct: 68 KPGQKILVAGCLVQREGKELAKHLPEVDLFFTPREINNLDKLLADLGENNKLVLSEPGFL 127 Query: 366 ---GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA-IRDT 421 R + E+ R+ + I GC C++C+I G+ SR D I+ EI+ ++ Sbjct: 128 NLEKKPRAKSNEVYRY-IKIADGCDNRCTYCTIPAIRGK-YTSRPLDDILEEIKDTLKQG 185 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 + V D ++Y + L R+ Sbjct: 186 IKEIILVAQDTTAYGIDLYG-----------------------------EFKLVELLRKI 216 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATH-----HVGGYLKIAPEHTEEGPLSKMM 536 +KG + + + + + EL V Y+ + +H L KM Sbjct: 217 GSIKGNFWVRL-------MYLYPDKITPELINEIKENPKVIKYVDVPLQHIHPEILKKMG 269 Query: 537 KPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 + G + + K+ + + FI PG +E L ++KK +F Sbjct: 270 RKGSS--EEIISTLERLRKEI-PDITIRTTFIVGFPGETEEQFNYLLDFVKKFKFNRLGA 326 Query: 597 QNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPA-NWPLI 655 +Y + M G+ P + E + + + L+KAL+ P I Sbjct: 327 FPYYREKGTPAAKM--KGQIPKKVKEQRYEKLMEVQQEISLNLNKALVGKKIPVIVEKKI 384 Query: 656 RQALEAMGKKHLIGSRRDCLVPAPTIEEMREAR 688 R +G+ ++ D ++ + +++ + Sbjct: 385 RGENLYLGRTYMDAPEIDGIIEIKAEKRLKKGQ 417 >UniRef50_C2KX45 2-methylthioadenine synthase n=2 Tax=Lachnospiraceae RepID=C2KX45_9FIRM Length = 478 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 79/441 (17%), Positives = 139/441 (31%), Gaps = 54/441 (12%) Query: 207 RLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKP 266 R AM ++ A+ G VD T I+ N Sbjct: 9 RFAMHNLGCKVNSYETEAMTEAILQEGARLVDFTEEADIYLINTCS---------VTNIA 59 Query: 267 VAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARAL 326 +Q + P + E++K DK IL T G L Sbjct: 60 DRKSRQMIHQAKQRNPEAIVIATGCYVEGKQEELKEDK-----GIDILIGNTGKGRVVEL 114 Query: 327 MQKHGDRYVWIN--PPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMR 384 ++ + + N P P S + + + P + R V + Sbjct: 115 IKAY-REAMLENDASPMEPFSPVREEGEYENLFLSKPK-----------DKSRAFVKVQD 162 Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GC C++C I GR I+SR E+ + EI + GF V+ L G + Y L Sbjct: 163 GCNQFCAYCIIPYVRGR-IRSRKEEDCLEEIRHLAK--EGFQEVV--LTGIHLSSYGLDF 217 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED 504 ++ E R+ E ++L + GI++I + S I Sbjct: 218 ENLSYEYASRKAE------------TGEALLHLISEVGKIPGIQRIRLGSLEPRIITERF 265 Query: 505 PRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYL 563 +KE+ + + ++ + E L +M + + + E A + Sbjct: 266 LAGLKEV--EAICPHFHLSLQSGAEKTLKEMNRHYTKEDFKKAVEDIRRVYPMAA----I 319 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 I PG R+ED +LK+ F V F + M + P Sbjct: 320 TTDVIVGFPGEREEDFQESLAYLKEISFYDLHVFKFSRRKGTKADEM--KEQIPDNIKTA 377 Query: 624 KSEDVFVPKGDKQRRLHKALL 644 +S+++ + ++ + L Sbjct: 378 RSKELLALALEDSKKFREKFL 398 >UniRef50_B5JP71 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP71_9BACT Length = 461 Score = 190 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 111/363 (30%), Gaps = 57/363 (15%) Query: 367 NARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFT 426 I ++ V+IM+GC C+FC + + GR ++R I++E+ + ++ Sbjct: 152 RDHIGKKGQVQAFVSIMQGCNMNCAFCIVPKTRGRE-RARPIQEIVDEVIGLAESGVKEI 210 Query: 427 GVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG 486 L G Y R +P + P + L + ++ G Sbjct: 211 ----TLLGQIVTSYGRRD---------------FPVV-----NGKSPFVQLLEKIEEIPG 246 Query: 487 IKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRF 546 I++I S + ++L+ + Y+ + + L M +P +R+ Sbjct: 247 IERIRFTSPHPRGFKQDLVEAYRDLSK--LCEYVHLPLQAGCNKTLRAMNRPYTK--ERY 302 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 +E+ D+ Y I PG + D A F + + + Sbjct: 303 REIVDSLRAMV-PSMYFSTDIIVGFPGETEADFNETAAMFDDIAFDMAYIFKYSIRTGTP 361 Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 + TM +P+ +K+RR L H + Sbjct: 362 AETM----------------PDQIPQEEKERRNQVLLDLLHKH----------SLARNEG 395 Query: 667 LIGSRRDCLVPAPTIEEMREARRQNRNTRPALTK-HTPMATQRQTPATAKKASSTQSRPV 725 L+G+ LV P + + + AS+ V Sbjct: 396 LVGTTEQVLVEGPAKKGDKYVGHTRGWRNAIFDANERLVGQLVDLKIDRATASTVYGDLV 455 Query: 726 NAG 728 AG Sbjct: 456 LAG 458 >UniRef50_B9XHC1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=bacterium Ellin514 RepID=B9XHC1_9BACT Length = 556 Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 63/417 (15%), Positives = 116/417 (27%), Gaps = 39/417 (9%) Query: 301 KGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRV 360 +K+ +R + R +K G + P + V A P V Sbjct: 148 IVEKIAELDKARAELKHEDEESLRG-TEKFGKTKTVVAPAVPLM------DVNARP---V 197 Query: 361 PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRD 420 P + R V I GC CSFC I G +SR + I+ E + + Sbjct: 198 YIPDFETPRFRLTPKHFAYVKIAEGCNHPCSFCIIPRMRGSH-RSRVQADIVREAKQLIA 256 Query: 421 TVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRR 480 +IS + Y L + + + + + L R Sbjct: 257 DGVKELNLIS----QDSTYYGLDLRPNHSRNIASPEK--FNSAAKSLPADATTLCTLLRE 310 Query: 481 ARDLKGIKKILIASGVRYDIAVEDPRYIKELAT-----HHVGGYLKIAPEHTEEGPLSKM 535 + G I + + + EL V Y+ + +H E L +M Sbjct: 311 LNAIPGDFWIRL-------LYTHPAHWTDELIQTIAKCKKVARYVDMPLQHIHENMLERM 363 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 + Y L + FI PG + L +++ +F Sbjct: 364 RRETSEQY--IVNLIQRIRAGI-PGIAIRTTFIVGFPGETETYFKTLLNFIRDTKFERLG 420 Query: 596 VQNFYPSPLANSTTMYYTGKNPLAKIGY---KSEDVFVPKGDKQRRLHKAL-LRYHDPAN 651 V + + M + + +E + V K + + K L + A+ Sbjct: 421 VFTYSKEDGTRAGNMEGQLADKIKSKRRELAMAEQLKVAKQVAESFVGKELRVLVEAEAS 480 Query: 652 WPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 ++ A + + LI L ++ R + + Sbjct: 481 AKELKNAKISSWEHGLIRGEDKQL---GQLKGRYLVARSEADAPDIDGRVYVRGNLP 534 >UniRef50_A6NSZ3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSZ3_9BACE Length = 471 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 48/350 (13%), Positives = 95/350 (27%), Gaps = 62/350 (17%) Query: 357 YKRVPHPAYGNARIPAYEM--IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 ++ P IP ++ V+IM GC CS+C + GR +SR + I+ E Sbjct: 158 FETADDPGSIAEGIPVVRQNGVKAWVSIMYGCNNFCSYCIVPYVRGRE-RSRDPEGILAE 216 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 +E + L G N Y P Sbjct: 217 VEELAKAGYKEI----TLLGQNVNSYGKDLPEPM------------------------DF 248 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 +L R+ + G I + D + + E V + + + L Sbjct: 249 ADLLRKVNAVPGDFLIRFMTSHPKDATEKLFDAMAE--CEKVAPVIHLPVQAGNNRVLKA 306 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M + + + + + E ++ + L I PG E+ + L++ + Sbjct: 307 MNR--VYTREIYLEKVRQLRQRI-PDIVLTSDIIVGFPGETTEEFEDTMSLLREVEYDAL 363 Query: 595 QVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPL 654 + P + M + K +K + + Sbjct: 364 FTFIYSPREGTPAAKM----------------PDPMSKEEKSANFQRLV----------D 397 Query: 655 IRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPM 704 ++ + + G CLV + + + R Sbjct: 398 LQNEISLKKHQAYEGKTIRCLVDGRSDDPRNNLTARTPGGRLVHFTGDEK 447 >UniRef50_B7GJM6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=190 Tax=Firmicutes RepID=MIAB_ANOFW Length = 527 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 71/499 (14%), Positives = 132/499 (26%), Gaps = 83/499 (16%) Query: 237 VDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPS 296 D + + + Y C N+ P +P + +LL + Sbjct: 69 KDFSIPEEFRGMGNGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNT 128 Query: 297 FE-KVKGDKVLYAHASRI-LHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEM----D 350 + + ++ + + NP + +N +M Sbjct: 129 CAIRENAENKVFGEIGHLKPLKQNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTH 188 Query: 351 SVFALPYKRVPHPAYGNARIPAYEM---------------IRFSVNIMRGCFGGCSFCSI 395 ++ LPY + + I+ VNIM GC C++C + Sbjct: 189 NIHRLPYILKEAYMSKEMVVEVWSKEGDVIENLPKVRKGNIKAWVNIMYGCDKFCTYCIV 248 Query: 396 TEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRR 455 G+ +SR + II E+ + L G N Y + Sbjct: 249 PYTRGKE-RSRRPEDIIQEVRHLAAQGYKEI----TLLGQNVNAYGKDFTDMKYG----- 298 Query: 456 LSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATH- 514 +L R + I +I + D D R I+ LA Sbjct: 299 ------------------LGDLMDELRKID-IPRIRFTTSHPRDF---DDRLIEVLAKGG 336 Query: 515 HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGT 574 ++ ++ + + L M + + +++ EL K+A L I P Sbjct: 337 NLVEHIHLPVQSGSSEVLKMMAR--KYTREQYLELVRKI-KEAIPGVALTTDIIVGFPNE 393 Query: 575 RDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGD 634 DE ++ F + P + M VP Sbjct: 394 TDEQFEETLSLYREVEFDSAFTFIYSPREGTPAAKMV----------------DNVPMEV 437 Query: 635 KQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNT 694 K+ RL + N + + + M K G + LV + R Sbjct: 438 KKERLQRL--------NALVNEISAKKM--KEYEGQVVEVLVEGESKNNPDVLAGYTRKN 487 Query: 695 RPALTKHTPMATQRQTPAT 713 + A + Sbjct: 488 KLVNFVGPKSAIGQLVNVR 506 >UniRef50_A5IJD4 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Thermotogaceae RepID=MIAB_THEP1 Length = 443 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 57/429 (13%), Positives = 122/429 (28%), Gaps = 60/429 (13%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHAS 311 Y + C N+ + P P E V++ + + K ++ Y+ Sbjct: 2 RFYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSELG 61 Query: 312 RIL-----------------HHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFA 354 ++L E R G R V A+ + Sbjct: 62 QMLKIKRKRKLVVGVAGCVAEKEREKLLERGADFVLGTRAVLKVTEAV---KRALQGEKV 118 Query: 355 LPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 ++ V I+ GC C++C + GR +SR + I+ E Sbjct: 119 ALFEDHLDEYTHELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGRE-KSRPMEDILEE 177 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 + + G + Y K + Sbjct: 178 VRELAKQGYREVTF----LGQNVDAYGKDLK------------------------DGSSL 209 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 L A ++GI++I + D + E I V + + + L Sbjct: 210 AKLLEEASKIEGIERIWFLTSYPTDFSDELIEVIAR--NPKVAKSVHLPVQSGSNRILKL 267 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M + + + L + + + + I P +ED + ++K +F Sbjct: 268 MNRSYTK--EEYLALLERIRSKV-PDVAISSDIIVGFPTETEEDFMETIDLVEKAQFERL 324 Query: 595 QVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPL 654 + + P + +Y + P + + + + + +R+++ L + + Sbjct: 325 NLAIYSPRKGTVAWK-HYKDEVPYEEKVRRMQFLMNLQ----KRINRKLNERYKGKTVRV 379 Query: 655 IRQALEAMG 663 I +A G Sbjct: 380 IVEAQAKNG 388 >UniRef50_C9LR79 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR79_9FIRM Length = 478 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 100/307 (32%), Gaps = 40/307 (13%) Query: 365 YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 Y I V IM+GC C++C + GR SR+ D I EIE + Sbjct: 174 YSELHSVRKSRIFAWVPIMQGCNKFCTYCIVPYVRGRE-TSRTIDDICREIEKLAREGYK 232 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 L G N Y L + +L + Sbjct: 233 EI----TLLGQNVNSYGLDFH------------------------DGTDFGSLIHAIDKI 264 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYD 544 GIK++ + D+ + A+ V ++ + +H L +M + + + Sbjct: 265 DGIKRVRYMTSHPKDMTFGMVDAMA--ASPKVVRHMHLPVQHGANEILRRMNRG--YTIE 320 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 RFKEL Y ++ + I+ PG ++ LK+ +F + P Sbjct: 321 RFKELL-KYVREKMPGITVTTDLITGFPGETEDMHEETLTLLKEMKFDSAYTFIYSPRRG 379 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 + M T + A + +++ + + L+K + + + +I + Sbjct: 380 TPAARM--TNQVSDAVCHRRLQEIMNVENEISLSLNKEM----EGKVYTVIAEGETKQNP 433 Query: 665 KHLIGSR 671 + G Sbjct: 434 DNWFGRT 440 >UniRef50_C4FYU3 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=C4FYU3_ABIDE Length = 515 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 95/292 (32%), Gaps = 34/292 (11%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS-DLG 433 + SVNI GC C++C + GR +SR I+ E++ + D GVI L Sbjct: 215 SFKASVNITYGCDNFCTYCIVPYVRGRE-RSRRPGDIVKEVKCLADA-----GVIEIMLL 268 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y + + E NL R ++GIK+I Sbjct: 269 GQNVNSYGKGLEGEKGEPV--------------------TFANLLRMVEKVEGIKRIRFM 308 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDT 552 + D + E I + + + ++ + + L +M + SY T Sbjct: 309 TPHPKDFSDELIEVIAD--SEKICKHIHLPFQAGSNNVLRRMNRRYTKESYLELAGKIKT 366 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 L I PG +ED + +K+ R++ + + + TM Sbjct: 367 RIPDIA----LTTDIIVGFPGETEEDFEDTLDVVKEVRYQSAYMFEYSKRTGTPAATMED 422 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 K +K V + + +K A + L G+ Sbjct: 423 QVDAEAVKRRFKRLQDTVAEYADDKFGNKVGCMAEVLAEEVNSEEPLIITGR 474 >UniRef50_A9KMU9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=27 Tax=Clostridiales RepID=MIAB_CLOPH Length = 456 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 104/328 (31%), Gaps = 60/328 (18%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + VNIM GC CS+C + GR +SR+ + II EI+ + L G Sbjct: 162 KFKAGVNIMYGCNNFCSYCIVPYVRGRE-RSRNPEDIIKEIKQLVSKGVVEVM----LLG 216 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y P + L + ++G+K+I + Sbjct: 217 QNVNSYGKTLDEPVS------------------------FAQLLQMVEQVEGLKRIRFMT 252 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 D++ + +K + + ++ + + L KM + + + + L D Sbjct: 253 PHPKDLSNDVIEVMKN--SKKICNHIHLPVQSGSTELLMKMNR--KYTKEDYLNLVDRI- 307 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 K A L I PG +ED ++ ++K + + + TM Sbjct: 308 KMAMPNISLTTDIIVGFPGETEEDFLDTLDVVRKVGYDSAYTFIYSKRSGTPAATM---- 363 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 + +P+ R + L IR++ + K G + Sbjct: 364 ------------ENQIPEEVANERFQRLLTT---------IRESSSKISKDDE-GKIAEV 401 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHT 702 LV ++ + N K T Sbjct: 402 LVEEVNEQDNSLMTGRLSNNVLVHFKGT 429 >UniRef50_B4UK35 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Cystobacterineae RepID=MIAB_ANASK Length = 464 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 67/353 (18%), Positives = 107/353 (30%), Gaps = 68/353 (19%) Query: 345 STEEMD-SVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRII 403 T MD + P P R+ A+ V M+GC C+FC + GR + Sbjct: 147 ETGWMDSEEYVFP---RADPEAARGRVTAF------VTAMKGCDNVCAFCIVPHTRGREV 197 Query: 404 QSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 SR ++ E A+ +I G N Y C Sbjct: 198 -SRPFPDVVAECAALAGVGVREVTLI----GQNVNSYTGGCT------------------ 234 Query: 464 CPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIA 523 +L RR + GI +I + +D++ ++ V + + Sbjct: 235 ----------FADLLRRVAAVPGIDRIRFTTSHPHDLSDALVEVFRD--EPKVMPHFHLP 282 Query: 524 PEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLA 583 + + L +M + S + + FD + A + FI PG D D Sbjct: 283 VQSGSDAVLRRMRRD--YSVAEYLDRFDRL-RAARPGIAITTDFIVGFPGETDADFEASL 339 Query: 584 LWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 L++ RF F P P + ++G E VP+ RL + L Sbjct: 340 ALLERARFEQSFSFVFSPRPHTVAA----------VRLGSAPEWRDVPREAAVARLERLL 389 Query: 644 LRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRP 696 A L +G + LV P+ E R N Sbjct: 390 AAQRRIAGEIL----------AGELGKVVEVLVEGPSDEPGERLGRTPENRVV 432 >UniRef50_B2UQE7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=MIAB_AKKM8 Length = 458 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 45/325 (13%), Positives = 104/325 (32%), Gaps = 60/325 (18%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 V+IM+GC C++C + G +SR +++E++ + D L G Sbjct: 162 AYVSIMQGCEMKCAYCIVPYTRGAE-RSRPIRDVVDEVKMLADAGVKEV----TLLGQIV 216 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 N Y + ++ + + L +++GI++I S Sbjct: 217 NRYGRQMETAGGKGG---------------------FVQLLEAVHEVEGIRRIRFVSPHP 255 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG-MGSYDRFKELFDTYSKQ 556 + + L + ++ + + L M +P +Y Sbjct: 256 IGFRQDLVQAFTYL--PKLCSHIHFPMQSGSDRILKMMRRPYRNETYLDLCSRMKQARPD 313 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 + I PG +ED + +++ +F + + P + M Sbjct: 314 L----SITTDIIVGFPGETEEDYLLTRQAVEQVQFDNAFIFRYSPRRGTPAAVM------ 363 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV 676 + +P+ K+ R L ++ + + L+G+ ++ L+ Sbjct: 364 ----------ENQIPEEVKEARNQDLLA---------VVNEIAIRKNR-DLVGTVQEVLL 403 Query: 677 PAPTI-EEMREARRQNRNTRPALTK 700 P+ R + R ++N + Sbjct: 404 EGPSKTNAARLSGRTSQNKPVMVDA 428 >UniRef50_C4Z0P5 2-alkenal reductase n=6 Tax=Clostridiales RepID=C4Z0P5_EUBE2 Length = 446 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 48/301 (15%), Positives = 95/301 (31%), Gaps = 44/301 (14%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 E R + I GC CS+C I GR ++SR + I+NE++ + T L Sbjct: 148 EHTRAYIKIQDGCNQFCSYCIIPYVRGR-VRSRKPEDIVNEVKTLAATGVKEVV----LT 202 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G + Y + + I L +++GIK+I + Sbjct: 203 GIHISSYGTDLE-------------------------NISLIELIEAIHEIEGIKRIRLG 237 Query: 494 SGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKPGM-GSYDRFKELFD 551 S + + + K +A + + ++ + + L M + Y Sbjct: 238 S---LEPRIITEEFAKRIAGLEKICPHFHLSLQSGCDKTLKAMNRKYNTEEYYEGCVKLR 294 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 + + I PG +ED + +L+K F + + + M Sbjct: 295 EVFEN----PAITTDVIVGFPGETEEDFLETRKFLEKVHFYEMHIFKYSRRKGTVADKM- 349 Query: 612 YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 + +S + + + K + LI + E G+ + G Sbjct: 350 -KEQVADTVKSERSAVLLALEKAQSLEYRKMYIGKRLEV---LIEELTEIDGRSYYTGYT 405 Query: 672 R 672 + Sbjct: 406 K 406 >UniRef50_B5YE40 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=MIAB_DICT6 Length = 440 Score = 185 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 65/445 (14%), Positives = 132/445 (29%), Gaps = 68/445 (15%) Query: 251 IPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE--KVKGDKV--L 306 +P Y C NK + K P K E +LL + + +KV Sbjct: 1 MPKYYIITYGCQMNKSDSEKVAGILENLGYTPSEKMEEADIILLNTCSVRERAEEKVFGK 60 Query: 307 YAHASRILHHETNPGCAR--ALMQKHGDRYVWINP-----------PAIPLSTEEMDSVF 353 ++ N + Q+ + + P +P E +D Sbjct: 61 LGELRKLKKRNQNLLIGIFGCMAQRMKEELIEKFPHVDFVLGSYKFTELPKILESLDGKK 120 Query: 354 ALPYKRV-PHPAYGNAR-IPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSI 411 + P P + R I + + I+ GC C++C + GR +SR + I Sbjct: 121 KVVLAEDIPSPQDVDFRVIKRENKFQAWIPIIYGCNNFCTYCIVPYLRGRE-KSRDPEEI 179 Query: 412 INEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNH 471 I E+E + L G + Y + Sbjct: 180 IREVEYLASQGVVEV----TLLGQNVDSYGKD-------------------------LGN 210 Query: 472 EPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGP 531 +L + IK+I + D++ + R + V + + + + Sbjct: 211 VDLADLLVEIHRIPRIKRIRFLTSHPRDVSDKLIRVVA--THPKVCPHWHLPLQAGSDRI 268 Query: 532 LSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 L +M + +Y +K L + + K + I PG +ED + L++ +F Sbjct: 269 LRRMGRG--YTYSEYKALIEKIRAEIPKASF-STDIIVGFPGEEEEDFLATRRALEEIKF 325 Query: 592 RLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHD--- 648 + + P + Y P +++ L + ++ + Sbjct: 326 DTVNLAIYSKRPGTPAAN--YEDLIPYETKKRWFDEL--------ENLQRKIIYEKNLSR 375 Query: 649 -PANWPLIRQALEAMGKKHLIGSRR 672 ++ + + + L G Sbjct: 376 VGKEEIVLAEEVNPKNPRELSGRTE 400 >UniRef50_Q2LT94 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Proteobacteria RepID=MIAB_SYNAS Length = 461 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 69/448 (15%), Positives = 130/448 (29%), Gaps = 78/448 (17%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE----KVKGDKVLYA 308 H Y + L C N + + E ++L + + K Sbjct: 19 HIYIQTLGCQMNVHDSEQIAALMEEKGYICTEDANEADLIILNTCSIREKAAQKAKSQLG 78 Query: 309 HASRILHHETNPGCARA--LMQKHGDRYVWINPPAIPLSTEEMD------SVFALP-YKR 359 + + N L Q+ GD + P ++D ++ LP + Sbjct: 79 RYRNLKRKKRNLLIGVGGCLAQQLGDELLTKVP--------DIDFIFGTHNIHQLPDFIS 130 Query: 360 V------------PHPAYGNARIPAYE---MIRFSVNIMRGCFGGCSFCSITEHEGRIIQ 404 HP+ + + A + V IM+GC CS+C + GR + Sbjct: 131 RIEKSRKKIVETTLHPSTPSIGVLALPCNGQVSSFVTIMQGCNNFCSYCIVPYVRGRE-E 189 Query: 405 SRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDIC 464 SR + II+EI + D L G N Y + Sbjct: 190 SRPPEDIIHEIRMLADHGVKEV----TLLGQNVNSYARKTSGEMG--------------- 230 Query: 465 PHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAP 524 L R +KGI+++ + D++ +L+ + ++ + Sbjct: 231 ---------FAELLREIEKIKGIERMRFTTSHPKDLSEFLITAFSDLSK--LCHHIHLPF 279 Query: 525 EHTEEGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLA 583 + + L+ M + Y E T + I PG DED Sbjct: 280 QSGSDRILALMNRGYTKSDYLAKVERLRTVCPDI----SITADVIVGFPGESDEDFKETI 335 Query: 584 LWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 + + RF + + M GK + + + + +KA+ Sbjct: 336 DMMNQIRFDNLFSFKYSEREGTAAVKM--DGKVSEPLKLERLQILQALQEQHTLEKNKAM 393 Query: 644 LRYHDPANWPLIRQALEAMGKKHLIGSR 671 + ++ + +K L G Sbjct: 394 ----EGKQEDVLVEGFSKNCRKDLTGRT 417 >UniRef50_C1SJG9 tRNA-N(6)-(Isopentenyl)adenosine-37 thiotransferase enzyme MiaB n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJG9_9BACT Length = 423 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 110/326 (33%), Gaps = 60/326 (18%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + V IM+GC CS+C + GR +SR + II+EI+ + D L G Sbjct: 130 SVSSFVTIMKGCNNFCSYCIVPYVRGRE-KSREQSEIIDEIKYLADKGAREI----TLLG 184 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y T+ L + D++GIK+I + Sbjct: 185 QNVNSYGTAL------------------------TDPVSFPELLDKVSDVEGIKRIRFVT 220 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 D + E ++ + YL + + L KM + +YD +KE + Sbjct: 221 SHPKDFSNELIDVMRG--NDKICEYLHLPLQSGSNAVLQKMNR--KYTYDHYKERVLR-A 275 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 K+ + L FI PG +ED + L++ R+ + N+ P + + Sbjct: 276 KEMIPDLALSSDFIVGFPGETEEDFQSTMKALEEIRYDMIYAFNYSTRPGTKAESF---- 331 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 + VP K+ RL K L + + L+ + Sbjct: 332 ------------NDDVPLEVKKMRLAKLLDAQKRIIAEN-------SAAYQDLV---VEV 369 Query: 675 LVPAPTIEEMREARRQNRNTRPALTK 700 +V + + + +NR R Sbjct: 370 MVEGESKKGAGQYSGRNRQNRVVNFS 395 >UniRef50_A1APR6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=5 Tax=Desulfuromonadales RepID=MIAB_PELPD Length = 440 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 64/471 (13%), Positives = 139/471 (29%), Gaps = 80/471 (16%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHAS 311 + Y E C N + + A P +P +LL + + ++ +Y Sbjct: 5 YVYIETFGCQMNVNDSERILTMLADIGYVPTQEPARARLILLNTCSVRAGAEEKVYRRLE 64 Query: 312 RILHHETNPGC-----ARALMQKHGDRYVWINPPAIP--------------LSTEEMDSV 352 ++ + + + Q+ G+ + P L+ E + Sbjct: 65 NLVVLKRHNSRLIIGVGGCVAQQEGEALLERIPKLDLVFGTHNLHLLNDMVLAAERGERK 124 Query: 353 FALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSII 412 + I I V +M+GC CS+C + G + RS I+ Sbjct: 125 SETSFIDNDQRLDLFPPIRGTARISSFVTVMQGCENYCSYCIVPYVRGPEVSRRS-GDIL 183 Query: 413 NEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHE 472 E+ + D L G N Y L+ + + Sbjct: 184 REVRQLADQGVREVA----LLGQNVNSYGLKSSAEPS----------------------- 216 Query: 473 PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPL 532 L R + GI++I + D++ E +L + L + + + L Sbjct: 217 -FAELIRLVAAVDGIRRIRFFTSHPKDMSPELIACFGDL--PALCSQLHLPAQSGSDNVL 273 Query: 533 SKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFR 592 ++M + + + + E + + I PG +E+ +++ R+ Sbjct: 274 ARMGRG--YTREEYLEKVRAL-RAVRPDIVFTGDMIVGFPGETEEEFQETLSLMEEVRYI 330 Query: 593 LDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANW 652 + P P + + + +G+KQ RL + Sbjct: 331 DLFSFAYSPRPGTRAAELA----------------DDLSRGEKQSRLERL---------- 364 Query: 653 PLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTP 703 +++ L+G+R+ LV + + + + + Sbjct: 365 QALQKRTTMEINDVLLGTRQTVLVEREGKRPGQISGKADNGRTVNFSGDRS 415 >UniRef50_A1ATL9 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Desulfuromonadales RepID=RIMO_PELPD Length = 450 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 76/461 (16%), Positives = 135/461 (29%), Gaps = 80/461 (17%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 L C+ N A A E +++ + +K K A L Sbjct: 14 LGCSKNLVDAEVMLGLLARQEYEITTDEREADIIIVNTCSFIKEAKQESIDAILDLAERK 73 Query: 319 NPGCARALM------QKHGDRYVWI-----------NPPAIPLSTEEMDSVFA-LPYKRV 360 N G L+ Q++ + + P I E L Y Sbjct: 74 NDGRCHTLIVSGCLPQRYQEELARELPEVDIFIGTGDYPRIAEILAEKSGTDEQLCYIGD 133 Query: 361 PHPAYGN--ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 P + R+ + + I GC CS+C I + G +SR ++++ E E + Sbjct: 134 PDFVFDETLPRLNSSPAWFSYLKIGEGCSNRCSYCIIPKLRG-PYRSRPLEALVAEAEQL 192 Query: 419 RDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLY 478 +IS Y + + L Sbjct: 193 ASRGVKELNIIS----QDITRYGSDME------------------------DGTTLETLL 224 Query: 479 RRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP 538 RR + GI+ I + I+ I++ + YL I +H + L M + Sbjct: 225 RRLVQIDGIQWIRLLYAYPDGISDALIALIRD--EPKICKYLDIPLQHISDPVLKLMRRR 282 Query: 539 GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQN 598 + +EL ++ L I PG ED +L ++++ RF V Sbjct: 283 SNEQ--QIRELLAKLRREI-PTLALRTSLIVGFPGETMEDFTSLMQFVEQARFDRLGVFC 339 Query: 599 FYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQA 658 + + TM V + K+ R K + I+ Sbjct: 340 YSREEGTPAATM----------------PDQVSERVKRERHRKLM----------RIQAR 373 Query: 659 LEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT 699 L + LIG+ +V + E + ++ P + Sbjct: 374 LSFKRNRELIGTTEQVIVEGYSEETELLLKGRSSRQAPDID 414 >UniRef50_C0QDK5 MiaB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QDK5_DESAH Length = 460 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 102/320 (31%), Gaps = 44/320 (13%) Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 ++ V P P + + + V IM+GC C++C + GR +SR Sbjct: 133 GQITDVEDSPAIYEAMPDFS---FIDNDKVSRFVTIMQGCDNFCTYCVVPYVRGRE-RSR 188 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 + +SI+ EI + D L G N Y + EQ C Sbjct: 189 TPESIVEEISILADAGVKEV----TLLGQNVNSYG------QKEQICS------------ 226 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEH 526 +L + + GI++I A+ D++ + I+++ V L + + Sbjct: 227 -------FSDLLEQISRVSGIERIRFATSHPKDLSDDLIYAIRDIDK--VCNQLHLPVQS 277 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 L KM + +++ E K L I P D + Sbjct: 278 GSNRILKKMNRGYTK--EQYLERVGKLRKNC-PSIALSSDMIIGFPSETRADFDETMDLV 334 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRY 646 ++ F + P A ++ + G K+ +E + ++ + + Sbjct: 335 RRVEFDGIFAFAYSDRPQAPASK-FSDGVEDAEKMERLNELIQFQDEMTHQKNQALVGAW 393 Query: 647 HDPANWPLIRQALEAMGKKH 666 ++ + L + Sbjct: 394 -----EQVLVEGLSQKKRHD 408 >UniRef50_B8GFG5 Radical SAM domain protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFG5_METPE Length = 489 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 128/438 (29%), Gaps = 68/438 (15%) Query: 238 DSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSF 297 D L Y + A + + E V++ Sbjct: 67 DLVGLTATTATISKAFQYVRKIRDAVPECFIFIGGPHVTFLPSETLAECRELNAVVIGEG 126 Query: 298 EKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPY 357 E+ D V + ET G A + GDR + PA L + +D ALP+ Sbjct: 127 EETVVDLVTSFSMTDPHWPETVRGIAYR--RNDGDRERIVVTPARELI-QNLD---ALPF 180 Query: 358 -KRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE 416 R P I + + RGC ++CS + G + ++RS ++++E+E Sbjct: 181 PARHLVPFNEYKLFDKDATIGYMI-TSRGCTFASNYCSSSHLMGGMFRARSPKNVVDEVE 239 Query: 417 AIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTIN 476 + T I L + N I+ Sbjct: 240 ELVSTY--HVDTIEFLD-------------------------------DNFMLNRSRAID 266 Query: 477 LYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMM 536 + R G+ +AS R + D + EL + + E L M Sbjct: 267 IAHEIRSR-GLDISFVASS-RVNAVNRD--LLMELKKAGLS-TIYYGVESGSLRTLKLMN 321 Query: 537 KPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 K E +K G ++ FI +PG EDM + + Q Sbjct: 322 K---RITLSMAEDAVRIAKDCGIS--VLTSFIIGYPGETYEDMNATIRFAIRLDPDYAQF 376 Query: 597 QNFYPSPLAN-----------STTMY--YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 P P +T + YT P+ + + R+L +A Sbjct: 377 TILTPYPGTPIFQELKKNNLLATEDWDRYTVLEPIIRYEAYG----LTSRKISRKLKEAY 432 Query: 644 LRYHDPANWPLIRQALEA 661 LR++ + R L Sbjct: 433 LRFYLRPGYLFRRSGLLK 450 >UniRef50_B4CZR4 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR4_9BACT Length = 480 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 49/283 (17%), Positives = 89/283 (31%), Gaps = 31/283 (10%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P Y R I GC CSFC I + G+ +SR+ +S++ E+ ++ Sbjct: 163 PDYDTPRFRLTPAHTAFTKIAEGCNHPCSFCVIPQMRGKH-RSRTIESVVAEVRSLVAEG 221 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 +IS + + +A + S P I L R Sbjct: 222 VKEINLIS----QDTTYFGMDLWEEKAGPRQQVDSSRGPT-----------LIKLLRELD 266 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 ++G I + + E I E V Y+ + +H L M + Sbjct: 267 KIEGDFWIRLLYTHPAHWSDELIACIAE--CKKVCRYIDMPLQHIHPRMLELMRRETSS- 323 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + + L + FI PG DE+ L ++++ RF V + Sbjct: 324 -EHIENLIARIRAGI-PGIAIRTTFIVGFPGETDEEFNYLLDFIERTRFERLGVFTYSQE 381 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 + + M + V + + +L + + R Sbjct: 382 EGSRAAKM----------DDQVPQKVKAARYKRAMKLQQKIAR 414 >UniRef50_C7H7X5 tRNA-I(6)A37 thiotransferase enzyme MiaB n=5 Tax=Clostridiales RepID=C7H7X5_9FIRM Length = 460 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 76/467 (16%), Positives = 134/467 (28%), Gaps = 83/467 (17%) Query: 249 DPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYA 308 D P + C N + + KP + +L + + + Sbjct: 21 DTPPLAFVHSYGCQQNVNDGERIKGVLVDIGYGLCDKPEDADLILFNTCAVREHAEQRVF 80 Query: 309 HASRIL--HHETNPGCARALM-----QKHGDRYVWINPPAIPLSTEEMDSVFALP----- 356 L E G L QKH + + P + L +D + LP Sbjct: 81 GNVGALKGLKEKKRGLMIGLCGCMANQKHVVEKLRKSYPYVDLVFG-VDGIDTLPQLIAQ 139 Query: 357 ----YKRVPHPAYGNA------RIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 +KRV I R + IM GC C++C + GR +SR Sbjct: 140 KLQKHKRVLMEPAQRPVIVENIPIRRESEFRAWLPIMYGCDNFCTYCIVPYVRGRE-KSR 198 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 I+ E + + L G N Y + Sbjct: 199 KPGDILAEFRGLVEAGYKEI----TLLGQNVNSYGKGLEEQV------------------ 236 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEH 526 +L + G +I + D + + I A H+ +L + + Sbjct: 237 ------DFADLLNLLCAVPGDYQIRFMTSHPKDASHKLIDTIA--AQPHLCKHLHLPVQC 288 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 + L KM + + ++ EL + Y+++ I PG +ED + + Sbjct: 289 GSDELLKKMNRH--YTIGQYMELIE-YARKKVPGITFSSDIIVGFPGETEEDFQDTLELV 345 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRY 646 KK + + + M P+ +K R+ + LL+ Sbjct: 346 KKVGYMQLFTFIYSKRTGTKAAEM----------------PDPTPRAEKTDRMTR-LLKV 388 Query: 647 HDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRN 693 D L+RQ +G LV + + R + N Sbjct: 389 QDEIAMDLVRQQ---------VGQTVRVLVEGYGRSDGTLSGRLDNN 426 >UniRef50_B4JIJ9 GH19109 n=4 Tax=cellular organisms RepID=B4JIJ9_DROGR Length = 647 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 54/352 (15%), Positives = 106/352 (30%), Gaps = 43/352 (12%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + V+IMRGC C++C + GR +SR DSI+ E+ ++ L Sbjct: 305 DSPTAFVSIMRGCDNMCTYCIVPFTRGRE-RSRPLDSIVREVRTLQQQGVKEV----TLL 359 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y R T ++ + + T P L + + +I Sbjct: 360 GQNVNSYRDRSGENNQATTDGNMASGFSTVYK-PKTGGLPFAVLLQSVAEAVPEMRIRFT 418 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS-YDRFKELFDT 552 S D + E R I++ +V L + + L++M + Y + Sbjct: 419 SPHPKDFSDEVLRVIRDY--PNVCKQLHLPAQSGNTAVLARMRRGYTRDAYLQLVTHIRQ 476 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 + G L FI G + + + ++ R+ + + + + Y Sbjct: 477 MLPEVG----LSSDFICGFCGETEAEFEDTVTLIESVRYNVAFLFAYSMREKTTAHRRYV 532 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 VP K RL + + + A R + Sbjct: 533 DD---------------VPTAVKTARLQRMVQAFRAGATHLHKRF------------EGQ 565 Query: 673 DCLVPAPTIEEMREARRQNRNT---RPALTKHTPMATQRQTPATAKKASSTQ 721 L+ + ++ RN + + + T ++ + Sbjct: 566 QQLILIEGKSKRSDSHWFGRNDANIKVIVPAASIPTTADAGESSRRNIGVGD 617 >UniRef50_C7HUB2 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Anaerococcus RepID=C7HUB2_9FIRM Length = 452 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 91/296 (30%), Gaps = 41/296 (13%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + VNIMRGC CS+C + + GR +SR II EIE + L G Sbjct: 160 FQAYVNIMRGCDNFCSYCIVPQSRGRE-ESRRPSHIIEEIENLVKNGYKEI----TLLGQ 214 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 N Y + + L + ++G++++ + Sbjct: 215 NVNSYG------------------------NKSDFNVTFPELLEKCAKIEGLQRLRFTTS 250 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 D++ + R IKE ++ Y + + + L M + +++ E + Sbjct: 251 HPKDLSDDLIRVIKE--NDNICNYFHLPMQSGSDKVLKDMNRKYNK--EQYLEKARKLKE 306 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + + I +P +ED +K F + P P + + Sbjct: 307 EI-PGIAISTDIIVGYPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKL--DPI 363 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 + + + + + ++ ++ K L G Sbjct: 364 DDKIVQDRFDRLLDTLYPIFNEKNKE-----YVGKVVEVLLESESKNNKNVLTGRT 414 >UniRef50_Q29AM2 GA19527 n=9 Tax=Bilateria RepID=Q29AM2_DROPS Length = 589 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 56/347 (16%), Positives = 101/347 (29%), Gaps = 44/347 (12%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + V+IMRGC C++C + GR +SR SI+NE+ A++ L Sbjct: 245 DSPTAFVSIMRGCDNMCTYCIVPFTRGRE-RSRPLASIVNEVRALQVQGVKEV----TLL 299 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y + ++ + T P L + + +I Sbjct: 300 GQNVNSYRDKGAGQTSDTSLVPGFKTVYKP----KTGGIPFSELLQSVAEAVPEMRIRFT 355 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDT 552 S D + E R I++ +V L + + L++M + +Y E Sbjct: 356 SPHPKDFSDEVLRVIRDY--PNVCKQLHLPAQSGNTEVLARMRRGYTREAYLELVEHIRE 413 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 G L FI G + + + + ++ + + + + Y Sbjct: 414 ILPTVG----LSSDFICGFCGETEAEFEDTISLINTVQYNVAYLFAYSMREKTTAHRRYV 469 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 VP K RL + + R + K + Sbjct: 470 DD---------------VPVAVKTARLQRMV---------QAFRDGATQLHKNF---EGK 502 Query: 673 DCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASS 719 L+ + +A RN P A + S Sbjct: 503 QQLILIEGKSKRSDAHWFGRNDANI-KVIVPAMDLPTDTGDAARRRS 548 >UniRef50_D2MKT1 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKT1_9BACT Length = 436 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 68/490 (13%), Positives = 142/490 (28%), Gaps = 98/490 (20%) Query: 251 IPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAH 309 Y E C N+ + + Q A P E V++ + + K D+ + Sbjct: 3 TDTLYLETYGCQMNEYDSDRIQNAL---GASITEDPKEADIVIVNTCAIREKADQKALSS 59 Query: 310 ASRILHHETNPGC-------------ARALMQKHGDRYVWINPPAIPLSTEEMDSVFAL- 355 R H + L+++ + P AIP + ++ + Sbjct: 60 LGRFKHLKAKNPELIVGVSGCVAQLYGEDLIRRIPHLDFVLGPRAIPQLPQLIEEIKEKK 119 Query: 356 ------------PYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRII 403 P+ +P Y PA V+I +GC C++C + G + Sbjct: 120 SRPVETSFDIQEPFDVLP---YHQEGKPA-----AFVSIQQGCNKKCAYCIVPTVRGSEV 171 Query: 404 QSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 +R + II E + +I G T N + L Sbjct: 172 -NRPIEDIIAEARYLIAKGVKEITLI----GQTVNSWKL--------------------- 205 Query: 464 CPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIA 523 +L R +L G+++I + DI + + ++ V ++ + Sbjct: 206 ------GGLKFGDLLRVLGELDGLERIRFTTSYPRDITKKMVEAMADV--PKVCRHIHLP 257 Query: 524 PEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLA 583 + + L M + S+ + + + + A + I PG ++D Sbjct: 258 VQSGSDKVLRLMNRTYSRSW--YIDSVNRL-RDAMPNIAVSSDIIVGFPGETEDDFEQTM 314 Query: 584 LWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 +++ F + P P ++ +G+ G + RL + Sbjct: 315 SLVEEVGFDSSFSFKYSPRPGTVGEELWRSGERVEDST----------AGQRLARLQEY- 363 Query: 644 LRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTP 703 ++A+ IG LV + ++ + + R Sbjct: 364 ------------QRAITLEKNAQRIGKSEQVLVEDASRKDSSWLSGRTEHNRIVNFPGEK 411 Query: 704 MATQRQTPAT 713 + Sbjct: 412 ELIGKMVDVR 421 >UniRef50_B2A3X6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Firmicutes RepID=MIAB_NATTJ Length = 451 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 49/320 (15%), Positives = 101/320 (31%), Gaps = 41/320 (12%) Query: 365 YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 + N + I+ V I GC C +C + G+ +SR + I E+E + Sbjct: 144 FENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVRGQQ-RSRDPEHIKYEVEKLAKEGLK 202 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 L G N Y + NL + Sbjct: 203 EI----TLLGQNVNSYGKDLDQNIS------------------------FTNLLEELSKI 234 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYD 544 +GI++I + D E +KE ++ + + + + L KM + + + Sbjct: 235 EGIERIRFMTSHPKDFDKELITTLKE--SNKICEHFHLPVQAGSNKILKKMGRG--YTRE 290 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 + ++ + + + I +PG +ED ++ +F + Sbjct: 291 HYVDIVNDIRAEL-PNASITTDIIVGYPGEEEEDFQETLDLVQNVKFDSAFTFVYSKRSG 349 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 + M + K G + + V + ++R + ++ + + + Sbjct: 350 TPAAEMA-EQVDEQTKKGRIQKLISVQQEISEQRNKDL-----ENTVQRILVEGVSKNNE 403 Query: 665 KHLIGSRR-DCLVPAPTIEE 683 L G R D LV P +E Sbjct: 404 DMLSGRTRTDKLVHFPGDKE 423 >UniRef50_C5BGB4 tRNA-I(6) n=5 Tax=Proteobacteria RepID=C5BGB4_EDWI9 Length = 474 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 55/352 (15%), Positives = 108/352 (30%), Gaps = 66/352 (18%) Query: 357 YKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE 416 + R+P P A V+IM GC C++C + G + SR D ++ EI Sbjct: 136 FDRLPEPRADGAT--------AFVSIMEGCNKYCTYCVVPYTRGAEV-SRPCDDVLFEIA 186 Query: 417 AIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTIN 476 + +L G N Y Sbjct: 187 QLAAQGVREV----NLLGQNVNAYRGATFDGGICS----------------------FAE 220 Query: 477 LYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMM 536 L R + GI +I + + + + ++ T + +L + + + L+ M Sbjct: 221 LLRLVAAIDGIDRIRFTTSHPIEFSDDIVAVYED--TPELVSFLHLPVQSGSDRILNLMK 278 Query: 537 KPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 + + +K + ++A + + FI PG +D + + F + Sbjct: 279 R--THTALEYKAIIRKL-RRARPDIQISSDFIVGFPGETQQDFEQTMQLIAEVDFDMSYS 335 Query: 597 QNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIR 656 F P + M V + +K++RL+ + N +R Sbjct: 336 FIFSARPGTPAADML----------------DDVAEEEKKQRLYIL----QERINQQAMR 375 Query: 657 QALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 + + G+ + LV + + + E + N R P R Sbjct: 376 YSRHML------GTVQRILVEGTSRKNVMELSGRTENNRVVNFAGQPEMIGR 421 >UniRef50_Q6ALW9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESPS Length = 447 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 103/349 (29%), Gaps = 50/349 (14%) Query: 343 PLSTEEMDSVFALP-YKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGR 401 P++ +D + +P + + V IM+GC C++C + GR Sbjct: 123 PITATNLDDKYVIPQFIPETTGKEHEGEFRKF------VTIMQGCNNFCTYCVVPYTRGR 176 Query: 402 IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYP 461 + SRS I+ EI + + L G N Y Sbjct: 177 EV-SRSIKDIVEEITVLVKSGIKEI----TLLGQNVNSYAQTNTVTE------------- 218 Query: 462 DICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLK 521 D +L R+ ++G+K++ + D++ + + K+L + Sbjct: 219 ------DDTPATFSDLLRQVAAVEGLKRLRFTTSNPKDLSNDLMQCFKDLDV--LCPQFH 270 Query: 522 IAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMV 580 + + L +M K + SY + + I PG DE+ Sbjct: 271 LPVQAGSNKVLKEMGRKYTVESYLDLVTQLRENCPEIA----ITTDIIVGFPGETDEEFE 326 Query: 581 NLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLH 640 L+ R+ + P + + E V + + + Sbjct: 327 ETMKMLETVRYHGSFSFKYSDRPGTKANEL----------TNKVDESVKSARLARFQARQ 376 Query: 641 KALLRYHDPANWPLIRQALEAMGKKHLIGSRR--DCLVPAPTIEEMREA 687 + + ++ L + I R + +V A + + Sbjct: 377 DEIGLERNQEYIGTTQEVLIEELRDGEIKGRMGTNHIVHAIGLTNKKPG 425 >UniRef50_Q0RDV0 Ribosomal protein S12 methylthiotransferase rimO n=43 Tax=Actinomycetales RepID=RIMO_FRAAA Length = 545 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 54/364 (14%), Positives = 100/364 (27%), Gaps = 62/364 (17%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 ++ I GC C+FC+I G + SR D ++ E E + ++S+ Sbjct: 187 PVAALKISSGCDRRCAFCAIPSFRGSHV-SRPADDVLAEAEWLAGEGARELVLVSE---- 241 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 + Y RA L + + GI ++ Sbjct: 242 NSTSYGKDLGDLRA------------------------LEKLLPQLAAVPGIVRVRTVYL 277 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELFDTYS 554 ++ + L T + YL ++ +H L +M + G + + Sbjct: 278 QPAELRPSLLEVL--LTTPGLAPYLDLSFQHASPAVLRRMRRFGGSEHFLDLLDRGRGLL 335 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 G + I PG + D+ LA +L+ V + + ++ Sbjct: 336 PGLGARSNV----IVGFPGETEADVDILAEFLEAAELDAVGVFGYSDEEGTEAVSL---- 387 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 + + + +RR + + L A + IGSR Sbjct: 388 ------------PGKIAEEEIERR----------RVQITDLVEQLTATRAQERIGSRVQV 425 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPK 734 LV T + S +P G +P Sbjct: 426 LVEEITDGIAAGCAGHQQPDADGSCLVRLPGPAGAAAGPPAGGPSGTGQPGLPGQPGQPG 485 Query: 735 AAVG 738 VG Sbjct: 486 VEVG 489 >UniRef50_D1N968 RNA modification enzyme, MiaB family n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N968_9BACT Length = 446 Score = 180 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 51/320 (15%), Positives = 88/320 (27%), Gaps = 54/320 (16%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + I RGC CS+C + GR I SR ++ E + L G Sbjct: 148 WHAQIAITRGCNRFCSYCIVPYVRGREI-SRDPGDVVREARELVAAGARELM----LLGQ 202 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 Y L + E P L + + +I S Sbjct: 203 NVAAYGLGGNTNPPEDGS------------------SPFAELLEELDRIPELLRIRFTSP 244 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 I + + V + + + + L M + ++D + E+ + + Sbjct: 245 YPTYFNGRLIDAIAK--SRTVCHNIHLPLQSGSDRMLKAMNR--QYTHDSYLEVVNRI-R 299 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 A + I PG D D + F + + P P A S + + Sbjct: 300 AAMPDVTFSTDVIVGFPGETDGDFKQTREVMNTVGFDNSFIFKYSPRPGARSAALADS-- 357 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 VP+ K+ R L L +Q IG+ ++ L Sbjct: 358 --------------VPQEVKEERNQILLNDLKLRVEAFLKQQ----------IGTTQEIL 393 Query: 676 VPAPTIEEMREARRQNRNTR 695 V + + R Sbjct: 394 VEGVSPRNPARWCGRTGTNR 413 >UniRef50_Q3JEH9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=30 Tax=Proteobacteria RepID=MIAB_NITOC Length = 447 Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 104/344 (30%), Gaps = 58/344 (16%) Query: 365 YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 + P E V++M GC CSFC + G I SR D +I EI + + Sbjct: 136 FDKLPEPRAEGPTAFVSVMEGCSKYCSFCVVPYTRGEEI-SRPFDDVIAEIVGLAEQGVR 194 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 L G N Y + L + Sbjct: 195 EI----TLLGQNVNAYRGSIGEG----------------------DTADLALLIHYVASI 228 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYD 544 +GI++I + + + + E+ + +L + + + LS M + + Sbjct: 229 EGIERIRFTTSHPVEFSDSLIQAFAEV--PALVSHLHLPVQSGSDRMLSLMKR--GHTVL 284 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 +K +Q + + FI PG + D + + F + P P Sbjct: 285 EYKAKLRKL-RQVRPDISISSDFIVGLPGETEADFQATLALVDEVGFDHSFSFIYSPRPG 343 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 + ++ P K+ RL A+L+ ALE Sbjct: 344 TPAASLPDC----------------TPIALKKERL--AILQGRLR--------ALEIAIS 377 Query: 665 KHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 + ++ + + LV P+ ++ + N R + + Sbjct: 378 RGMVDTVQQVLVERPSKKDPTMLAGRTANNRVVNFSASQDMVGQ 421 >UniRef50_C3WBM1 Radical SAM domain-containing protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WBM1_FUSMR Length = 445 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 43/336 (12%), Positives = 96/336 (28%), Gaps = 62/336 (18%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 + I GC C++C I + GR ++SRS + I+ E + + + +L Sbjct: 147 AYLKISEGCNRACTYCIIPQMRGR-LRSRSIEDIVEEAKRLVASGVREI----NLLAQET 201 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 Y + + L + ++G+K + Sbjct: 202 TEYGIDLY------------------------GDKKLAALMKELCKIEGLKWLRTYYMHP 237 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELFDTYSKQ 556 + E +K + + Y + +H + L M + + Sbjct: 238 EYVTDELIEVMK--SEEKICKYFDVPIQHVSDNILRNMARAKSGEQVKDVLNRIRKAIPE 295 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 A + I PG +E+ L ++++ F V + + + Sbjct: 296 A----TIRTTLIVGFPGETEENFQELMDYVREFEFDYAGVFKYSREEDTVAYNL------ 345 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV 676 VP+ K++R + + L + E ++ L+G + ++ Sbjct: 346 ----------PNQVPEEIKEKRYAELV---------NLQSEIAERKNRR-LLGEEIEVMI 385 Query: 677 PAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPA 712 + E + R + P Sbjct: 386 DGVSSESEYLLEGRTRGQALEIDGKVLTTDGTAKPG 421 >UniRef50_C0ZF18 Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZF18_BREBN Length = 448 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 103/358 (28%), Gaps = 69/358 (19%) Query: 362 HPAYGNARIPAYE----------MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSI 411 P + I YE + I GC C+FCSI G +SR+ +SI Sbjct: 128 RPIFVGNPIFTYEDVVKRKVKQGTYTAYIKIAEGCDNACTFCSIPLMRGG-FRSRTIESI 186 Query: 412 INEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNH 471 + E + +I + Y + Sbjct: 187 VEEARHLAAQGVVEVSLI----AQDSTNYGTDIYDGKL---------------------- 220 Query: 472 EPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGP 531 L R +++GI+ I + E V Y+ + +H+E+ Sbjct: 221 -MLPELLNRLAEVEGIEWIRLHYAYPGFFTDELIHTFA--TNPKVCKYVDMPLQHSEDHI 277 Query: 532 LSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 L +M +PG + + L Q + L I PG +ED L+ ++K RF Sbjct: 278 LKRMRRPGRQT--DIRALVAKIRAQV-PDVALRTSLIVGFPGETEEDFERLSEFVKDIRF 334 Query: 592 RLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPAN 651 V + ++ + V + K++R + + Sbjct: 335 DRLGVFTYSNEDDTPASRL----------------PDHVDEEVKEKRANMLM-------- 370 Query: 652 WPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQ 709 I++ + +G D L+ R + + + + Sbjct: 371 --EIQREVAGDRNGRFVGQVLDVLIERYEGRNDIYVGRTQYDAPEIDGEVFVTGFKGE 426 >UniRef50_B8E278 RNA modification enzyme, MiaB family n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E278_DICTD Length = 441 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 99/317 (31%), Gaps = 50/317 (15%) Query: 361 PHPAYGNARIPAYE-MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIR 419 P P + RI E + + I+ GC C++C + G+ +SR II EIE + Sbjct: 130 PKPEEVDFRIIRRENKFQAWIPIIYGCNNFCTYCIVPYLRGKE-KSRDPQEIIKEIEHLA 188 Query: 420 DTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYR 479 + L G + Y + +L Sbjct: 189 NQGVVEV----TLLGQNVDSYGKD-------------------------LGNVDLADLLV 219 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 + GIK+I + D++ + + + + + + + L +M + Sbjct: 220 EIHKIPGIKRIRFLTSHPRDVSDKLINVVA--THPKICPHWHLPLQAGSDRILRRMGRG- 276 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 +Y+ +K L + + I PG +ED + L++ +F + + Sbjct: 277 -YTYNEYKALIEKIRAKI-PRASFSTDIIVGFPGEEEEDFLATRRALEEIKFDTVNLAIY 334 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHD----PANWPLI 655 P + + Y P +++ L + ++ + ++ Sbjct: 335 SKRPGTPAAS--YDDPVPYETKKKWFDEL--------ENLQRKIIYERNLSMIGKEELVL 384 Query: 656 RQALEAMGKKHLIGSRR 672 + + K L G Sbjct: 385 AEGVNPKNPKELSGRTE 401 >UniRef50_Q67NJ9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Clostridia RepID=MIAB_SYMTH Length = 470 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 98/345 (28%), Gaps = 56/345 (16%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 ++ V IM GC C++C + G+ +SR + I+ E++ + GF + L G Sbjct: 166 LKAWVTIMYGCDKHCTYCIVPTTRGKE-RSRPYEVILAEVQELARQ--GFKEI--TLLGQ 220 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 N Y E + I L R+ GI++I + Sbjct: 221 NVNAYGKDLYGRHGEGA----------------FDFGDLIELID--RNSPGIERIRFTTN 262 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG-SYDRFKELFDTYS 554 D + I V + + + + L +M + Y R Sbjct: 263 HPKDFTRKMVEQIAR--AEKVCEWFHLPVQSGSDSVLRRMKRSYNRKQYLRLVGWIRELI 320 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 A + I PG +E+ +++ ++ + + + M Sbjct: 321 PDA----VITTDIIVGFPGETEEEFQETLSLVEEVQYDAAFMFMYSERAGTPAAQMEDRL 376 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 P +K+ RL + + ++ + + +G D Sbjct: 377 SVP----------------EKKERLQRLM----------EVQNRIARAKNEARVGKVYDI 410 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASS 719 LV + R R P +A + Sbjct: 411 LVEGLDKGKPDVVFGWTRGNILVTFPGDESLRGRIVPVRITRAGT 455 >UniRef50_A9KKS8 MiaB-like tRNA modifying enzyme n=23 Tax=Clostridiales RepID=A9KKS8_CLOPH Length = 466 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 56/301 (18%), Positives = 116/301 (38%), Gaps = 32/301 (10%) Query: 364 AYGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 Y I A E R + I GC CS+C I GR I+SRSE+ I E+ + + Sbjct: 148 EYEELAIAAVTEKTRAYIKIQDGCNQFCSYCIIPYARGR-IRSRSEEEIKKEVMRLVEN- 205 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 G+ ++ L G + Y L S + + + + P + L Sbjct: 206 -GYQEIV--LTGIHLSSYGLETLSVKEQAALLPENGISP------------LMTLILSLS 250 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM-G 541 +++G+ +I ++S + + ++K LA + + ++ + + L +M + Sbjct: 251 EIEGLNRIRLSS---LEPRIITEEFVKTLARSKLCPHFHLSLQSGCKETLVRMNRKYTPD 307 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 Y + E+ TY + + I PG +E+ + +L+K +F + + Sbjct: 308 DYYKRCEIIRTYYEN----PAITTDVIVGFPGETEEEFEDTKAFLEKVQFSQMHIFKYSK 363 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA 661 + M + P +SE++F D ++++ L N ++ + Sbjct: 364 RKGTKAEAMP--NQVPEQIKSKRSENLF----DSEKKMRAKYLDSFIGINEIVLTEEETM 417 Query: 662 M 662 + Sbjct: 418 I 418 >UniRef50_B3E0M0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Verrucomicrobia RepID=MIAB_METI4 Length = 467 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 102/339 (30%), Gaps = 56/339 (16%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 V+IM+GC CSFC + G +SR D I E++ + +T L G Sbjct: 148 QPIAYVSIMQGCSMHCSFCIVPTTRGEE-RSRPIDEIFEEVKRLAETSVKEIV----LLG 202 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y + +P + P + L + ++ IK+I S Sbjct: 203 QIVNRYGAKE---------------FPWV-----KGKSPFVQLLEKLSTIEEIKRIRFTS 242 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 + ++++ + ++ + + + L M + S +F L D Sbjct: 243 PHPLGFKEDLIAALRDI--PQLCEHVHLPVQSGSDKILKAMRRGYSRS--KFLSLVDKLR 298 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 K + L I +PG +ED L + RF + + + ++ Sbjct: 299 KAI-PQLALSTDIIVGYPGETEEDFQQTCSLLNEVRFDNAFIFRYSAREGTTAASL---- 353 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 SE+V + + + + +G + Sbjct: 354 ------GDQLSEEVKFERNYRLLEIQNKITMEKAQK----------------WVGQVVEI 391 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPAT 713 LV + + + + + R + P Sbjct: 392 LVEGESKKNASKFQGRTRTNHLVIIPKNERWRGEFLPVR 430 >UniRef50_A4XKJ7 RNA modification enzyme, MiaB family n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XKJ7_CALS8 Length = 434 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 42/299 (14%) Query: 317 ETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAY-EM 375 E ++ DR + L ++ YKR + +I ++ E Sbjct: 85 EVQKIEGVDIIVGTRDREKIVEYVTEYLKQKKKILAVNNEYKRD---TFEELKISSFNER 141 Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 R + I GC CS+C I G + SRS SI++E++ + G+ + + G Sbjct: 142 TRAFIKIEEGCEQFCSYCIIPYARGS-VVSRSLSSILDEVQRLASN--GYKEFV--ITGI 196 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 + Y +++ ++ +++I ++S Sbjct: 197 NISAYGKDLDYKVT------------------------LVDVIEEISKIEKVRRIRLSS- 231 Query: 496 VRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTY 553 + V +IK L + +L ++ + + L M + Y + E+ Y Sbjct: 232 --LEPIVMKEDFIKRLVKIEKLCHHLHLSLQSGSDKILKLMNRHYTTDEYRQIVEMVRGY 289 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 I PG DED ++K+ F V F P N+ M Y Sbjct: 290 WNDVA----FTTDIIVGFPGESDEDFERTVEFVKEIGFSRIHVFRFSPKKGTNAYNMPY 344 >UniRef50_B4S6S9 Radical SAM domain protein n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S6S9_PROA2 Length = 473 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 73/474 (15%), Positives = 132/474 (27%), Gaps = 63/474 (13%) Query: 201 LVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLP 260 ++ +A L I D + + E L +P I I G Sbjct: 29 ILSLAAWLRSHGVTLNIADYQLAGGDMGEQLLPSRFASFIEEHSPAPIIGISTMGGMLPV 88 Query: 261 CADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNP 320 + K + + P + A L +P Sbjct: 89 VLMAVEEYKARHPEKTIILGGSGPAGVAAHILRAFPAVDCIFCGEGEAALLEFLEKNGDP 148 Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSV 380 ++ + GD + NP +S ++D + P PAY + Y ++ V Sbjct: 149 SSVAGVVYREGDS-IVENPARKRIS--DLDVL--------PVPAYDLIDMDRYAVVN--V 195 Query: 381 NIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMY 440 + RGC C+FC G+ + RS D+++NEI +R + D Sbjct: 196 STSRGCPYRCAFCESPAFWGKGVVYRSLDNVMNEIRELRTRWAKRQINLCD--------- 246 Query: 441 MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDI 500 RR K + + R D+ Sbjct: 247 ------------------------DTFVARRPRVEEFCRRVISEKLDFRWECFA--RVDL 280 Query: 501 AVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE 560 DP +K L + E + LS++ K + R S+ Sbjct: 281 V--DPDLMK-LMAEAGCSGVFFGVESGSDSVLSRIDKRFTVARARDV-----ISQAVKIF 332 Query: 561 QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQN--FYPSPLAN-----STTMYYT 613 ++ F+ P ED + L + + +VQ F P A + Y+ Sbjct: 333 PHVYTSFVWGLPFETMEDFYDSILLMTEFGNSGVRVQRPHFSLRPGAPLFAEYGYDLAYS 392 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHL 667 P + + + RR + + ++ + L + L Sbjct: 393 SSLPYHFLEVPRRFLPPEVEETIRRYPEIFITFYHITGLEFEEKQLFMRNLEAL 446 >UniRef50_D1PVJ2 MiaB family RNA modification enzyme n=8 Tax=Bacteroidales RepID=D1PVJ2_9BACT Length = 443 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 47/265 (17%), Positives = 88/265 (33%), Gaps = 35/265 (13%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 + I GC C++C+I GR SRS + I+ E++ + +I Sbjct: 150 AYIKIAEGCDRHCAYCAIPLMTGRH-TSRSMEDILEEVKQLVAEGVKEFQIIE----QEL 204 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 Y + L R D+ G+K I + Sbjct: 205 TYYGVDID------------------------GKPRIAELISRMADIPGVKWIRLHYAYP 240 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 +E ++E +V YL IA +H + LS+M++ + EL ++ Sbjct: 241 NQFPLELLDVMRE--KPNVCKYLDIALQHISDHVLSRMLRHVSKA--ETLELIRKIRQEV 296 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 L + PG +ED L ++++ RF + S ++Y P Sbjct: 297 -PGITLRTTLMVGFPGETEEDFQELLDFVREVRFERMGAFVYSEEEGTYSA-LHYEDDVP 354 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKA 642 + +++ + D + A Sbjct: 355 AEVKQRRLDELMAVQQDISAEIQAA 379 >UniRef50_Q1PZS6 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZS6_9BACT Length = 447 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 104/338 (30%), Gaps = 62/338 (18%) Query: 368 ARIPAYEM--IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 RI AY + V +MRGC CS+C + GR + SR+ + E+ + Sbjct: 147 KRIAAYRPNVYQAFVTVMRGCDNYCSYCIVPYVRGREV-SRTIADVEREVLELVSNGCRE 205 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 L G N Y + +L ++ Sbjct: 206 I----TLLGQNINSYGKSL------------------------PGNITLGDLLIELNGIE 237 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDR 545 ++++ + D++ + R + +L YL + + + L KM + Y R Sbjct: 238 KLERLRFVTSHPKDMSRDLIRTMSQLDKA--CEYLHMPAQSGSDRILKKMHRGYTAGYYR 295 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 Y++ + FI PG +ED ++ RF+ + + Sbjct: 296 ---ELIQYARDLMPTIKVAGDFIVGFPGETEEDFQETVCLMEDIRFQNSFIFKYSTRTGT 352 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKK 665 + + VP K++R +++ + K Sbjct: 353 KAAEL----------------TDDVPDEIKKKRN----------TTLLDLQKKISLEENK 386 Query: 666 HLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTP 703 LIG + LV + + + + R + K P Sbjct: 387 KLIGRKLQVLVEGASKSDPNKLSGRTRQNNIVVFKGQP 424 >UniRef50_D1B5R4 RNA modification enzyme, MiaB family n=4 Tax=Synergistaceae RepID=D1B5R4_THEAS Length = 433 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 57/377 (15%), Positives = 97/377 (25%), Gaps = 67/377 (17%) Query: 341 AIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEM--IRFSVNIMRGCFGGCSFCSITEH 398 L D L P P E +R V I GC C++C + Sbjct: 106 PEALERSMADGEVRLLLDEDPREVDDLCCTPHVEEGAVRGYVTIAHGCDHFCAYCIVPYV 165 Query: 399 EGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSC 458 GR +SR + I+ E+ + L G N Y Sbjct: 166 RGR-FRSRDPEGIVEEVRQLVARGVREI----TLLGQNVNRYGKDL-------------- 206 Query: 459 VYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELAT-HHVG 517 L ++GI ++ A+ D + + + V Sbjct: 207 ----------PGGPQFPGLLEMVARVEGISRVRFATNHPVDFSR---ELVDVMVRCEKVC 253 Query: 518 GYLKIAPEHTEEGPLSKMMKPGMGS-YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRD 576 + + + + L M + Y L + G + I PG Sbjct: 254 PSINLPVQSGSDRVLKLMGRGYTRDEYLSMVALLRDNLPEVG----ITSDLIVGFPGETP 309 Query: 577 EDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQ 636 ED L++ RF L + P + M + K ++ Sbjct: 310 EDFEKSLSLLEEVRFDLVHTAAYSVRPGTRAERM-------------EGHLDVSTKAERL 356 Query: 637 RRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRP 696 R+++ R N +G LV P + + + + Sbjct: 357 NRVNQLQARISLEINL-------------SKVGRVYPVLVEGPAPKGEGMWQGRTPQDKV 403 Query: 697 ALTKHTPMATQRQTPAT 713 L K P + P Sbjct: 404 VLFKG-PSKVGEEVPVR 419 >UniRef50_C7RHT5 RNA modification enzyme, MiaB family n=3 Tax=Anaerococcus RepID=C7RHT5_ANAPD Length = 449 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 88/296 (29%), Gaps = 41/296 (13%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + VNIM GC CS+C + E GR +SR +I+ E+E + + L G Sbjct: 158 FQAFVNIMTGCDNFCSYCIVPESRGRE-ESRRPSAILAEVEHLVEEGYKEI----TLLGQ 212 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 N Y + L + ++G+K++ + Sbjct: 213 NVNSYGNKADFDMT------------------------FPELLEKISQIEGLKRLRFTTS 248 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 D++ E IK ++ Y + + L M + +++ E + Sbjct: 249 HPKDLSDELIEVIKN--NDNICNYFHLPLQSGSSKVLKDMNR--KYDQEKYIERAKKLRE 304 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + + I +P +ED ++ F + P P + + T Sbjct: 305 EI-PGIAISTDIIVGYPTETEEDFKETLKVCREIEFDSAFTFKYSPRPKTRAAKL--TPI 361 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 + + + + + ++ ++ L G Sbjct: 362 DDEIVQDRFDRLLDTIYPIFNEKNKE-----YIGKTVEVLLESESKNNPDILTGRT 412 >UniRef50_A8MLX7 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=RIMO_ALKOO Length = 438 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 56/450 (12%), Positives = 130/450 (28%), Gaps = 84/450 (18%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKV----LYAHASRIL 314 L C+ N V + K + +++ + ++ K +++ Sbjct: 8 LGCSKNLVVTEEIIGLFKSNHFNIVNKKEDAEIIVINTCGFIESAKQEAINTILEMAKLK 67 Query: 315 HHETNPGCARA-LMQKHGDRYVWINPPAIPLST--------EEMDSVFALPYKRVPHPAY 365 +++ L+Q++ P + +E++++ L + + Y Sbjct: 68 NNKCKYLIVAGCLVQRYKKELEKAIPEVDLFISISEYKQIWKEIENLLDLETGKESNLDY 127 Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 R+ + I GC C++C+I +G I SR+ + I+ E + Sbjct: 128 H-NRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYI-SRTMEDILKEARNLAKQGIKE 185 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 VI Y L L ++ Sbjct: 186 LIVI----AQDTTKYGLDIY------------------------GEARLPQLLEELCKIE 217 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELAT-----HHVGGYLKIAPEHTEEGPLSKMMKPGM 540 I+ + + V EL + Y I +H + L +M + Sbjct: 218 DIEWVRF-------LYVYPESITDELIKVVGENDKICNYFDIPIQHISDSVLKRMNR--K 268 Query: 541 GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + + + ++ + + I PG +ED L ++++ +F V + Sbjct: 269 SDGASVRNIIEKIRREI-PDVIIRTTLIVGFPGETEEDFKELYEFVEETKFDKLGVFAYS 327 Query: 601 PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE 660 + + E + K+ RL K + +++ + Sbjct: 328 KEDNTPAAKL--------------KEQIH--HATKKSRLRKIMA----------LQEKIS 361 Query: 661 AMGKKHLIGSRRDCLVPAPTIEEMREARRQ 690 + +G+ L+ + T R Sbjct: 362 RESLEQKVGNVYKVLIESRTKGGNYYIGRT 391 >UniRef50_C9KQ61 RNA modification enzyme, MiaB family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ61_9FIRM Length = 455 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 51/356 (14%), Positives = 95/356 (26%), Gaps = 61/356 (17%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 RI V I GC C+FC+I G +SR + I +E+ + + Sbjct: 136 PRITTTPSYTAYVKIAEGCNNRCAFCAIPYIRGD-YRSRRIEDICDEVRHLTENGVREVV 194 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 +I + Y L R + + Sbjct: 195 LI----AQDSTEYGRDLYGA------------------------PKLSELLREIVKVPKL 226 Query: 488 KKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFK 547 + + + E I + + Y+ + +H + L M +P + + + Sbjct: 227 QWVRTLYSYPKYFSDELIETIA--SEPKICKYVDLPLQHAHDAVLRSMRRPD--TQEEMR 282 Query: 548 ELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANS 607 L ++ + FI PG D L ++++ R V + + Sbjct: 283 ALIKKLRERI-PGVTIRSTFIVGFPGETDAQYHTLRNFIEEMRLDKVGVFTYSREEGTPA 341 Query: 608 TTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHL 667 M VP+ Q R H + ++ + + L Sbjct: 342 YDM----------------PNQVPEEIMQERYHDLM----------SLQCKISEQINQSL 375 Query: 668 IGSRRDCLVPAPTIEEMREA-RRQNRNTRPALTKHTPMATQRQTPATAKKASSTQS 722 G D LV E+ + R R + P + Q Sbjct: 376 EGKELDVLVEGRDEEQPNISVGRSYREAPEVDGQVYVENDTDSKPGDIVRVRVLQG 431 >UniRef50_Q2RJK1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RIMO_MOOTA Length = 432 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/390 (16%), Positives = 113/390 (28%), Gaps = 84/390 (21%) Query: 326 LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRG 385 ++ + ++ P + T E+ P P + I G Sbjct: 109 IINRVLKGERVLDVPGPEMITGEL-------------PRLIEDGKP-----FAYLKIAEG 150 Query: 386 CFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCK 445 C C++C+I +G +SR + ++ E ++ ++ Y L C Sbjct: 151 CNNRCTYCTIPSIKG-PYRSRPLEKVVAEAVSLAARGIKELVLV----AQDTTAYGLDCY 205 Query: 446 SPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDP 505 L RR ++GI+ + + I P Sbjct: 206 ------------------------GEYRLPELLRRLARIEGIEWVRLLYAYPTRIT---P 238 Query: 506 RYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPG-MGSYDRFKELFDTYSKQAGKEQYL 563 I+ +AT V YL + +H EG L +M +PG + R E + + Sbjct: 239 ELIEVMATEPGVVPYLDLPLQHASEGVLRRMGRPGTGAAGLRAIESLRRAIPEI----TI 294 Query: 564 IPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGY 623 FI PG +ED L +L R F P + ++ Sbjct: 295 RSTFIVGFPGEEEEDFQILLDFLTDARLDWVGAFKFSPEEGTIAASL------------- 341 Query: 624 KSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEE 683 VP+ K+ R + +L +Q++ + +G L P + Sbjct: 342 ---PGQVPEEVKEERYQRLMLH----------QQSITRACNEGWLGREVQVLKEGPEVGR 388 Query: 684 MREARRQNRNTRPALTKHTPMATQRQTPAT 713 R+ K P Sbjct: 389 SM--RQAPEVDGVVYVKGDPSPAGSMVTVK 416 >UniRef50_A0LFB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=MIAB_SYNFM Length = 456 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 57/358 (15%), Positives = 102/358 (28%), Gaps = 62/358 (17%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + V IM+GC C++C + GR +SR+ D I+ EI+ + L G Sbjct: 158 VVAQVTIMQGCNNFCTYCIVPHVRGRE-RSRAPDDILREIDFLASRGAREVL----LLGQ 212 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 N Y P + +L RR I+++ + Sbjct: 213 NVNSYGRGLPDPIS------------------------FPDLLRRIGKETSIRRVRFTTS 248 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM-GSYDRFKELFDTYS 554 D+ + L + +L + + +G L M + Y Sbjct: 249 HPKDLTEDLIECFAGL--PFLCKHLHLPFQSGSDGILKLMHRGYTARQYLEKIARLREVC 306 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 + L I P +ED + +++ RF + PL + Sbjct: 307 PEIA----LSTDVIVGFPAESEEDYLQTLRLIEEVRFDSLFSFRYSDRPLTRAA------ 356 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 VP K RRL + I+ + G+ R+ Sbjct: 357 ----------GFPDKVPMDVKVRRLARL----------QSIQADITLQKNLAETGTVREV 396 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKR 732 LV P+ + + + R + T + P A S + + Sbjct: 397 LVEGPSKASNGQMTGRTQQNRIINFQCPVDLTGKIVPVRIVAAYSHSLKGELLSQPGK 454 >UniRef50_B1ZVI7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Opitutaceae RepID=MIAB_OPITP Length = 480 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 102/344 (29%), Gaps = 57/344 (16%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I V+I +GC C+FC + + G +SR D I+ E E + L G Sbjct: 174 QITAFVSIQQGCNMDCAFCIVPKTRGDE-RSRPMDDIVRECEQLAARGVREV----TLLG 228 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 Y R + P + L R L GI++I S Sbjct: 229 QIVTSYGRRDYTH--------------------TNGISPFVQLLERVHALDGIERIRFTS 268 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 + L + GY+ + + L M +P + +R++E+ D Sbjct: 269 PHPRGFKDDLVAAYGRL--PKLCGYVHLPLQSGSNRILRAMNRP--YTRERYREIVDAL- 323 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 + + Y I PG DED + + + V + + Sbjct: 324 RAVRSDMYFSTDVIVGFPGETDEDFEQTRELFEACNYDMAYVFKYSVRTGTPAAE----- 378 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 VP+ K++R L + L+ + + Sbjct: 379 -----------RGDQVPEDVKEQRNQLLLELLRQNSER----------RNALLLDTVEEV 417 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKAS 718 LV P R R R R + + TP R +AS Sbjct: 418 LVEGPDKTGQRFTGRT-RGNRVCIFEATPDLVGRLVSLRITRAS 460 >UniRef50_Q01RU5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Acidobacteria RepID=MIAB_SOLUE Length = 445 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 56/391 (14%), Positives = 112/391 (28%), Gaps = 79/391 (20%) Query: 348 EMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRS 407 + + F P+ R +P R + I+ GC C++C + G +SR+ Sbjct: 132 DTEETFDTPFTRRDNPH------------RAYLTIIEGCDKACAYCVVPFTRGPE-RSRT 178 Query: 408 EDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHM 467 +S++ E + + L G N Y Sbjct: 179 SESVMAEARGLTEKGYTEV----QLLGQNVNSYR------------------------DP 210 Query: 468 DTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHT 527 L + ++ G++++ + D + A + ++ + + Sbjct: 211 SPAGWDFATLLAKVAEIPGMRRVRYTTSHPRDFVRPIVDAMD--ANEAICDHIHLPVQSG 268 Query: 528 EEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLK 587 L+ M + + + D + D + K A + L I PG D D L Sbjct: 269 SSKVLAAMDR--LYTRDEYLRRID-WIKSAKRRYSLTTDIIIGFPGETDADFEQTLDLLD 325 Query: 588 KHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYH 647 + ++ + P P ++ M + +P+ +K + LL Sbjct: 326 EVQYDSLFSFKYSPRPNTSALAM----------------EDRIPEEEK----QRRLLTLQ 365 Query: 648 DPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQ 707 + IR +IGS ++ LV + R T T + Sbjct: 366 EKQRAIQIR------RNAEMIGSIQEVLVEG---RNQALGQWIGRTT----CNRTLNFSH 412 Query: 708 RQTPATAKKASSTQSRPVNAGAKKRPKAAVG 738 T R +G + Sbjct: 413 PDTNGNELVGKYLPVRVTRSGPNSLVGESAA 443 >UniRef50_D1C2I9 RNA modification enzyme, MiaB family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2I9_SPHTD Length = 460 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 70/495 (14%), Positives = 140/495 (28%), Gaps = 98/495 (19%) Query: 239 STRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE 298 R P + + C N+ + K + E +++ S Sbjct: 8 LARAPEPAGVQAAKRYCIWTIGCQMNEAESAKAAAMLSQAGYLQTHLEEEADVIIVNSCV 67 Query: 299 --KVKGDKVLYAHASRILHHETNPGCAR---------ALMQKHGDRY----VWINP---- 339 + DKV + + R Q +R+ ++ P Sbjct: 68 VRQAAEDKVA-GKLGSLARLKRVRPDVRIALTGCMVTGQEQALAERFPHVDLFYGPSQFE 126 Query: 340 ----PAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSI 395 A L+ + D + LP+ P A + V I+ GC CS+C + Sbjct: 127 RLVEIAPELAHVDTD-LAELPHFYQPD--------AAGSDVTAFVPIIYGCNFVCSYCIV 177 Query: 396 TEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRR 455 GR +SR +I E+E + + L G T N Y Sbjct: 178 PYRRGRE-RSRPMAEVIAEVERLAERGVKEV----TLLGQTVNAYGHDL----------- 221 Query: 456 LSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHH 515 +L ++ GI++I + ++ + + L Sbjct: 222 -------------PGSPDLADLLTAVNEIPGIERIRFLTSHPKYMSDRIVQAVATL--PK 266 Query: 516 VGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTR 575 ++ + + ++ L +M + + ++E Y ++ + I PG Sbjct: 267 ACEHINLPVQAGDDEVLRRMRRTYTVDF--YRERIA-YIRETIPGVTVSTDIIVGFPGET 323 Query: 576 DEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDK 635 +E L + R V + P P S + +P +K Sbjct: 324 EEQFQRTLDLLAELRLDKVHVAMYSPRPRTLSARW----------------EDDIPWDEK 367 Query: 636 QRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTR 695 +RR ++ + + +G+ + LV + M + R + R Sbjct: 368 RRRHQ----------AVEKLQAQILGERNRGYLGATFEILV-----DGMAKGRWRGRTRG 412 Query: 696 PALTKHTPMATQRQT 710 L + Sbjct: 413 NDLVFFEAPGDWKGK 427 >UniRef50_Q0W344 Putative 2-methylthioadenine synthetase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W344_UNCMA Length = 404 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 70/442 (15%), Positives = 120/442 (27%), Gaps = 73/442 (16%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASR 312 Y E C N+ + ++A + P E +++ + H + Sbjct: 4 RVYIETYGCTANEADSAGIRDAVLASGGAIASSPEEADVIVVNTCAVT-------GHTAN 56 Query: 313 ILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPA 372 + + + ++ + + P E +D +LP R A Sbjct: 57 SMLRAVSRFPGKRVLVA---GCLAVAEPGRLKGYEFVDGPGSLPVVRALGLRPEAGLSIA 113 Query: 373 YEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA-IRDTVPGFTGVISD 431 ++ I GC G CS+C + GR I+S I+ I + D Sbjct: 114 MTGRTATIKIAEGCNGQCSYCIVRLVRGR-IRSTPAPDIVEAARRAIAEGASELFLTSQD 172 Query: 432 LGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKIL 491 G Y L L R L G K+ Sbjct: 173 SGA-----YGLD--------------------------TGVRLPTLIRSIASLPGNFKVR 201 Query: 492 IASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFD 551 I + IA P + L V + I + + L M +P + + Sbjct: 202 IGMMNPFSIADILPDMVDVLNHPKVYRFAHIPVQSGSDRILKLMQRPYTEQ--EYSAIIS 259 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 +I P + D L+ +R + F P P + M Sbjct: 260 RLRAGV-PGITFSTDYIVGFPTETEADFRLTLEDLRTNRPLKVNITRFSPRPGTPAAAM- 317 Query: 612 YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 + + K+R + L H +++A +GSR Sbjct: 318 ---------------PDVLERTKKERS--RMLTALHHEVTSHDLKEA---------VGSR 351 Query: 672 RDCLVPAPTIEEMREARRQNRN 693 R LV AR + N Sbjct: 352 RSVLVSEKGKPGTVIARDPSYN 373 >UniRef50_C4FZF9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4FZF9_ABIDE Length = 449 Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 108/338 (31%), Gaps = 47/338 (13%) Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPT 436 R ++ I GC C++C I GR I+SR + I+ E + + GF ++ L G Sbjct: 147 RANIKIQDGCDQFCTYCIIPFVRGR-IRSRDMEGIVEETDRLVK--AGFREMV--LTGIH 201 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 Y + L ++G +I + S Sbjct: 202 IGSYGRDID------------------------GESRMLELLTELNKVEGDFRIRLGS-- 235 Query: 497 RYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 + + +++ L V + ++ + L +M + + + K Sbjct: 236 -VEPRLITEEFLEGLVKLKKVCPHFHLSLQSGSTTVLKRMNRHYGA--EEYLNSV-KLLK 291 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + + I PG DE+ ++K+ F V + + M Sbjct: 292 KYYDRPGITTDIIVGFPGETDEEFEETVAFVKEVGFLKVHVFPYSKRDGTYAAKM-NEQI 350 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR--- 672 P K ++ + V + + K L ++ L+ + ++ G++ + + Sbjct: 351 APEIKKERENILIKVCEEVSE----KYLESFNGDMEQVLLEEEIK--GREDYVMAHSARY 404 Query: 673 -DCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQ 709 + VP + A ++ N + + T + Sbjct: 405 IEVAVPKMILSGRENADKEFLNVKGMMLSDTSDGALKG 442 >UniRef50_A3EV78 TRNA-i(6)A37 modification enzyme (MiaB) n=3 Tax=Leptospirillum RepID=A3EV78_9BACT Length = 468 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 66/474 (13%), Positives = 130/474 (27%), Gaps = 58/474 (12%) Query: 234 WSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVL 293 T G Y + C N + + P +P +L Sbjct: 10 DRFPTGNPPHTRGSAFEGKTFYIKTFGCQMNVHDSERMAGLLTAEGGNPVSEPAAADIIL 69 Query: 294 LPSFEKVKGDKVLYAHASRILHHETNPGCARA--------LMQKHGDRYVWINP------ 339 + + DK S + + Q+ G+ + P Sbjct: 70 VNTC--TIRDKADQKALSDLGRIRQVRKEGPGTILAVTGCMAQREGEEIFRLVPDVDLIL 127 Query: 340 -PA-----IPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFC 393 P+ IPL S + P P + V + GC C++C Sbjct: 128 GPSQIRNLIPLLDAASTSRARVDGTLWPVPEMTTPPAIRPPGVTAFVTVQEGCDKACAYC 187 Query: 394 SITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTC 453 + G +SR I+ E+E + + L G N Y + Sbjct: 188 VVPATRGAE-RSRPVTDIVREVENLVSSGFREI----TLLGQNVNGYGQKG--------- 233 Query: 454 RRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELAT 513 DT L +R D+ G+ ++ + D++ + + + Sbjct: 234 --------------DTAGASFPELLQRLSDIPGLLRLRFTTSHPMDMSEDLIDVMA--TS 277 Query: 514 HHVGGYLKIAPEHTEEGPLSKMMKPGM-GSYDRFKELFDTYSKQAGKEQYLIPYFISAHP 572 V +L + + + L +M + Y R+ E +A L I Sbjct: 278 SRVMPHLHLPVQSGSDRMLERMQRGYSLDDYRRWIEKLRKKVPEAA----LTTDLIVGFC 333 Query: 573 GTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPK 632 G +ED +++ RF + P P + + ++ + V + Sbjct: 334 GETEEDFEKTLAAVEEFRFDGAFAFIYSPRPSTPAHSWEDVPPREMSVERLERLQKKVEQ 393 Query: 633 GDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 +R + + + A+G+ + R + P + Sbjct: 394 QAMERN-QSLVGSRVEILTEKWDPETRTAVGRTPQFQTVRALVAPERPDPSPGD 446 >UniRef50_A0D7J9 Chromosome undetermined scaffold_40, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D7J9_PARTE Length = 504 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 73/496 (14%), Positives = 146/496 (29%), Gaps = 57/496 (11%) Query: 218 RDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAV 277 R+ +T+ +P S + + P + E C N + Q + Sbjct: 11 RNYFSTSKRSINEIPSLSEFMKQQDPQVNNTNNGPKFFIETYGCQMNANDSQIVQSILSS 70 Query: 278 TVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVW 336 E + L + + +K ++ S + G + ++ ++ Sbjct: 71 EGYSNTNDISEADIIFLNTCSIRANAEKKVFQRMSELKSQNKVLGILGCMAERLKEQLFV 130 Query: 337 I---------NPPAIP--LSTEEMDSVFALPYKRVPHPAYGN-ARIPAYEMIRFSVNIMR 384 + ++P L++ ++ + Y + I + I V+IMR Sbjct: 131 QGANIIVGPDSYKSLPTLLNSFQLTRDKQIDTNLSLTETYDDILPINPTDSITTYVSIMR 190 Query: 385 GCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRC 444 GC CSFC + GR +SR+ +SI+ EI+ + L G N Y Sbjct: 191 GCNNMCSFCVVPFTRGRE-RSRNPESILEEIQILTQKGIKEV----TLLGQNVNSY---F 242 Query: 445 KSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVED 504 + + + ++ N L +I S + Sbjct: 243 FQDEKISSQHENTVGFTELYKLRSGNGLRFDQLLDEIAVKFPKTRIRFTSPHPKNF---- 298 Query: 505 PRYIKELATHH--VGGYLKIAPEHTEEGPLSKMMKPGMG-SYDRFKELFDTYSKQAGKEQ 561 P+ + E+ H + + I + + L KM + + T Sbjct: 299 PKKVLEVIAKHPNICKNIHIPIQSGSDEILKKMRRNYTRGAIVDLCNEARTLIPNV---- 354 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 L I + D L+ +F + + ++ Sbjct: 355 TLSTDVIVGFCDETEYDFEQTLSLLQLVQFENAFMFAYSMREKTHA-------------- 400 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTI 681 Y++ VP+ K RL K + + H N+ + IG + LV Sbjct: 401 -YRNLQDNVPESVKSSRLEKLIEQQHKIMNYKNSLE----------IGKKHIVLVEQLGN 449 Query: 682 EEMREARRQNRNTRPA 697 + + R + N Sbjct: 450 KPNQLKGRTDSNKGVV 465 >UniRef50_B2V930 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=7 Tax=Aquificales RepID=MIAB_SULSY Length = 437 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 50/340 (14%), Positives = 106/340 (31%), Gaps = 54/340 (15%) Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 E ++ + P + A+ V ++RGC C++C + GR +SR Sbjct: 123 EILEEIDENENLLDQFPTVRENKYTAF------VTVIRGCDKKCTYCIVPTTRGRE-RSR 175 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 I+ E++ + + +I G Y Sbjct: 176 RIGDILREVQYLVEDGVKEIHLI----GQNVTAYGKDFGDV------------------- 212 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEH 526 L + ++ G+++I +G D+ + + + +L + L + + Sbjct: 213 ------KFWELLKAVAEVDGVERIRFTTGHPRDLDEDTIKVMADL--PQICEALHLPIQA 264 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 + L M + + + + + K+ L I PG ED + + Sbjct: 265 GSDRILQAMDRG--YTQKEYLQKIE-LLKKYIPNIALSTDIIVGFPGETYEDYLETVKVI 321 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRY 646 K+ + + P P + + T +P ++ + L K + Sbjct: 322 KEVEYDQVFAFKYSPRPGTPAADLPMTE-SPEELSKRLNDLI---------NLQKDITFK 371 Query: 647 HDPANWPLIRQALEAMGKKH--LIGSRR-DCLVPAPTIEE 683 + I + L + L+G R + LV A E Sbjct: 372 KNLEYQDKIVEILVEEINQENKLVGRTRTNKLVYAEGSPE 411 >UniRef50_UPI0001C33830 SSU ribosomal protein S12P methylthiotransferase n=3 Tax=Cyanobacteria RepID=UPI0001C33830 Length = 439 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 70/466 (15%), Positives = 131/466 (28%), Gaps = 78/466 (16%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAH-ASRILHHE 317 L C N+ + A YV++ + ++ + + + Sbjct: 12 LGCEKNRIDSEHILGLLAAEGYSVSSNENLADYVVVNTCSFIQQAREESVRTLVELAENN 71 Query: 318 TNPGCARALMQKHGDRYVWINPPAIPLS-----TEEMDSVFALPYKRVPHPAYGNARIPA 372 A + Q D+ + P + + E + +V + A Sbjct: 72 KKIIIAGCMAQHFQDQLLEELPEVVAIVGTGNYQEIVKTVQRVELGERVIDISQKPTFIA 131 Query: 373 YEMI---------RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 E + + I GC C+FC I G +SR+ +SI+ E + + + Sbjct: 132 DETVPRYRTTNEGVAYLRIAEGCNYRCTFCIIPHLRGNQ-RSRTIESIVAEAQQLANEGV 190 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 ++S + T N Y L L + Sbjct: 191 QEIIIVSQI---TTN-YGLDLY------------------------GKVKLAELLQALGK 222 Query: 484 LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSY 543 + + I + + E + +KE+ +V YL + +H+ L M +P + Sbjct: 223 VN-VPWIRVHYAYPTGLTAEVLKAVKEV--PNVIPYLDLPLQHSHPKILKAMNRPWKEAI 279 Query: 544 -DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 D + L FI PG DE +L ++K+H F V F P Sbjct: 280 NDEIIKSIRASIPDV----VLRTTFIVGFPGETDEYFEHLVKFIKRHHFDHVGVFVFSPE 335 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 S M VP Q R I+Q + Sbjct: 336 EGTPSYKM----------------PDQVPLEIAQER----------RDYLMEIQQPISNR 369 Query: 663 GKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 + +G L+ + + R +++ + Sbjct: 370 KNQQYVGKIVKVLIEQENTKTHQYIGRSIKSSPDVDGVVFVKGKAQ 415 >UniRef50_B5EE49 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Geobacter RepID=MIAB_GEOBB Length = 441 Score = 175 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 68/488 (13%), Positives = 134/488 (27%), Gaps = 99/488 (20%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHASRI 313 Y E C N + K P + VLL + + ++ +Y H + Sbjct: 8 YLETFGCQMNVSDSEKIVTLMKGMGYQQTQDPVDADLVLLNTCSIRATAEQRVYGHLGKF 67 Query: 314 LHHETNP-----GCARALMQKHGDRYVWINPP-----------------------AIPLS 345 + G + Q+ G++ + P Sbjct: 68 KSIKKTKPGLIIGVGGCVAQQEGEKLLKKAPFVNLVFGTHNLHLLQGMVAAAEEGKRSSQ 127 Query: 346 TEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQS 405 T+ +D + PH + V +M+GC C++C + GR I S Sbjct: 128 TDFLDDEKR--FDLFPHSEAEGG-------VTRFVTVMQGCDNFCAYCIVPHVRGREI-S 177 Query: 406 RSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICP 465 RS ++ E+ A+ D+ L G N Y C E Sbjct: 178 RSAAKVVEEVRALADSGVTEV----TLLGQNVNSY---CSKQPGE--------------- 215 Query: 466 HMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPE 525 +L R + GI++I + D++ +L + ++ + + Sbjct: 216 ------PDFPDLLRLVAQVDGIERIRFTTSHPKDMSPRLIECFADL--PKLAPHIHLPAQ 267 Query: 526 HTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALW 585 + L +M + ++ + Q+ I PG + + Sbjct: 268 SGSDRVLERMNRGYTAQ--QYLAKVAALKEACPAIQF-TGDMIVGFPGEDEAAFQDTMAL 324 Query: 586 LKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 +++ ++ + P + Y + K + RL A Sbjct: 325 MEQVQYADLFSFIYSARPGTKAAE-------------YADDATRAEKQGRLERLQAA--- 368 Query: 646 YHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMA 705 ++ + L G+ + LV + R N R + P Sbjct: 369 ----------QKKTTLARNRSLEGTVQKVLVEGLSSTGDSLFGRTGGN-RGTVMAGDPSL 417 Query: 706 TQRQTPAT 713 R Sbjct: 418 AGRVLDVK 425 >UniRef50_A6TRJ4 Ribosomal protein S12 methylthiotransferase rimO n=26 Tax=Bacteria RepID=RIMO_ALKMQ Length = 446 Score = 175 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 51/335 (15%), Positives = 92/335 (27%), Gaps = 70/335 (20%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 RI + I GC C++C I + G+ +SR ++II E + + + Sbjct: 137 PRIQTTASHSAYIKISDGCDNYCTYCIIPKLRGK-YRSRKMENIIQEAQTLANNGVKEII 195 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 +I Y + + L + +++GI Sbjct: 196 LI----AQDTTRYGIDLY------------------------DEYRLSALLDKLSEVEGI 227 Query: 488 KKILIASGVRYDIAVEDPRYIKELAT-----HHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 + I I + EL V Y+ I +H L M + Sbjct: 228 QWIRI-------LYCYPEMITDELIATIKNNDKVCKYIDIPIQHCSTKILKLMNRRTSK- 279 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + L + K + I PG +ED L +++ +F V + Sbjct: 280 -EEIVSLIEKLKKNV-PNIVIRTSIIVGFPGESEEDFNELKAFIEDIKFDRLGVFTYSQE 337 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 + + VP K+ R K L+ + R Sbjct: 338 EGTPAAQLAE----------------QVPSELKESR-QKILMELQQRISLNKNR------ 374 Query: 663 GKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPA 697 IG + L+ E+ R + Sbjct: 375 ---LYIGQSIEVLIEEEIAEKTEYLGRSQGDAPEI 406 >UniRef50_Q8RG43 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=9 Tax=Fusobacterium RepID=MIAB_FUSNN Length = 435 Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 49/324 (15%), Positives = 95/324 (29%), Gaps = 60/324 (18%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 S++I GC C+FC + GR +S + I+ ++E L G Sbjct: 146 ASISITYGCNNFCTFCIVPYVRGRE-RSVPLEEIVKDVEQYVKKGAKEIV----LLGQNV 200 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 N Y K N + L ++G + S Sbjct: 201 NSYGKDFK------------------------NGDNFAKLLDEICKVEGDYIVRFVSPHP 236 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 D + I + + L + + L KM + +++ L D + Sbjct: 237 RDFTDDVIEVIAK--NKKISKCLHLPLQSGSSQILKKMRRGYTK--EKYLALVDKIKSKI 292 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 L I PG +ED ++ ++K F + + + TM Sbjct: 293 -PGVALTADIIVGFPGETEEDFLDTIDVVQKVSFDNSYMFMYSIRKGTKAATM------- 344 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 D + + K+ RL + + + N ++ + G+ LV Sbjct: 345 ---------DNQIEESVKKERLQRLM----EVQNKCSFYESSKYKGR------IVKVLVE 385 Query: 678 APTIEEMREARRQNRNTRPALTKH 701 P+ + + + L + Sbjct: 386 GPSKKNKEVLSGRTSTNKIVLFRG 409 >UniRef50_D1N2J3 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N2J3_9BACT Length = 452 Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats. Identities = 76/486 (15%), Positives = 133/486 (27%), Gaps = 80/486 (16%) Query: 247 KIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVL 306 Y L C+ N + + +P E ++ + + + Sbjct: 8 PAQAGTALYLVSLGCSKNLVDTEVIAGTLLTSGRTLAFEPDEADLYVINTCAFIPAARDE 67 Query: 307 YAHASR--ILHHETNPGC----ARALMQKHGDRYVWINPPAIPLST---------EEMDS 351 A I+ + PG A L + D V P + L T +D Sbjct: 68 AREAIEDGIVWKQEKPGRLLVVAGCLTEWDKDGSVRKEYPEVDLWTGVNQVAEIARLLDR 127 Query: 352 VFALP-YKRVPHPAYGN--ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSE 408 LP P Y + R+ + I GC C++CSI GR +++R Sbjct: 128 QSTLPENAEEPVYLYDDCTPRLQLTLPHLAYLKIADGCNNRCTYCSIPGIRGR-LRTRPM 186 Query: 409 DSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMD 468 +S++ E + + VI +Y Sbjct: 187 ESVVREARNLIEGGVRELLVI----AQDITVYGND-----------------------RP 219 Query: 469 TNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTE 528 + + L L+G I + E ++ T V YL I +H Sbjct: 220 ESGDTLARLLTALNALEGNFVIRLLYTHPAHYTEEFIDFMARGNTK-VLPYLDIPLQHIS 278 Query: 529 EGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLK 587 + L +M + + L FI+ PG +E+ L + K Sbjct: 279 DRILKQMNRHVTRKQTEELLTKLRERIPGL----TLRTTFITGFPGETEEEYQELKSFAK 334 Query: 588 KHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYH 647 K +F V + P P + VP ++R Sbjct: 335 KFKFERCGVFPYSPEPRTPAAAF----------------PDQVPAELAEQR--------- 369 Query: 648 DPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQ 707 + L++Q + M K + V ++E R + + Sbjct: 370 ---STELMKQQISIMKKLSKNQVGKTVRVLVDDVDENGAVARGAMDAPEIDNVIYIPKPK 426 Query: 708 RQTPAT 713 R P Sbjct: 427 RLKPGK 432 >UniRef50_D1W9B3 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Prevotella RepID=D1W9B3_9BACT Length = 497 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 59/329 (17%), Positives = 104/329 (31%), Gaps = 52/329 (15%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I V+IMRGC C +C + GR +SR +SI+ E+ +RD L G Sbjct: 192 KIGGFVSIMRGCNNFCHYCIVPYTRGRE-RSRDVESILREVRDLRDKHCKEI----TLLG 246 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR-DLKGIKKILIA 493 N Y C + + L RR ++ G+ +I Sbjct: 247 QNVNSY------------CFTIPEHLSATGETIPAETIDFPKLLRRVAHEVPGV-RIRFT 293 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDT 552 S D++ + R I E +V ++ + + L M K + Y Sbjct: 294 SSHPKDMSDDTLRVIAE--EPNVCKHIHLPVQSGSNKILKLMNRKYTVEWYMDRINAIRR 351 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 G + + G +ED + ++ + + + P ++ Sbjct: 352 IIPDCG----ISTDMFVGYHGETEEDHQQSLVLMRTVGYDSAFMFKYSERPGTYASKHL- 406 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 VP+ +K RRL++ + ++ L A+ K G Sbjct: 407 --------------PDDVPEEEKIRRLNEMI----------HLQTELSAVSNKKDEGKTF 442 Query: 673 DCLVPAPTIEEMRE-ARRQNRNTRPALTK 700 D LV + + R +N K Sbjct: 443 DVLVEGFSKRSREQLCGRTEQNKMVVFDK 471 >UniRef50_D1PL31 tRNA-I(6)A37 thiotransferase enzyme MiaB n=2 Tax=Clostridiales RepID=D1PL31_9FIRM Length = 447 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 64/398 (16%), Positives = 111/398 (27%), Gaps = 81/398 (20%) Query: 316 HETNPGCARALM-----QKHGDRYVWINPPAIPLSTEEMDSVFALP------------YK 358 E NP + Q H + + P + L +D + LP Y Sbjct: 76 KEQNPRLIIGVCGCMAQQPHIVEKLRQSYPYVDLVFG-VDGIDRLPAMLAERLRRGKRYL 134 Query: 359 RVPHPAY---GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEI 415 P I R + IM GC C++C + GR +SR D+I+ E Sbjct: 135 ETPEQRNAVVEEMPIRRDSGFRAWLPIMYGCDNFCTYCIVPYVRGRE-RSREPDAILAEF 193 Query: 416 EAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI 475 + L G N Y +P Sbjct: 194 RDLITKGYKEI----TLLGQNVNSYGKGLGNPI------------------------DFA 225 Query: 476 NLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM 535 +L + G +I + D + + I A H+ ++ + + L +M Sbjct: 226 DLLNLLCAVPGDYQIRFMTSHPKDASRKLIDTIA--AQPHMCKHIHLPVQSGSNRLLQQM 283 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 + + +++ +L D Y++ I PG +ED ++K + Sbjct: 284 NRH--YTVEQYLDLVD-YARNKIPGVTFSSDIIVGFPGETEEDFEATLELVRKVGYMQLF 340 Query: 596 VQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLI 655 + + M +K R+ + LLR D + I Sbjct: 341 TFIYSKRNGTPAAKM----------------PDPTTHAEKAARMER-LLRTQDEIAFAAI 383 Query: 656 RQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRN 693 + G LV A R + N Sbjct: 384 ---------ASMAGQNVRVLVEAAGRTPGTVNGRLDNN 412 >UniRef50_B1ZW93 Ribosomal protein S12 methylthiotransferase rimO n=5 Tax=Verrucomicrobia RepID=RIMO_OPITP Length = 471 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 59/322 (18%), Positives = 97/322 (30%), Gaps = 36/322 (11%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P Y R V I GC C+FC I + GR +SR+ +S++ E+ + Sbjct: 143 PDYDTPRFRLTPKHFAYVKIAEGCNHPCTFCIIPQIRGRH-RSRTVESVVAEVRQLVREG 201 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 +IS + + R P L R+ Sbjct: 202 VKEINLIS----QDTTFFGMDTWEQR-----------PNPRTPVDSGRGTALTTLLRQLN 246 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 ++G I + + E R I E V Y+ I +H + LS+M + G Sbjct: 247 AIEGDFWIRLLYTHPAHWSDELIRTIAE--CPKVARYIDIPLQHISDAMLSRMQRETSGG 304 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 Y ++L + FI PG D D+ L ++ + +F V + Sbjct: 305 Y--IRDLIARIRAGI-PGIAVRTTFIVGFPGETDADVDELCAFISETKFERLGVFRYSQE 361 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR-----YHDPANWPLIRQ 657 + M P E + + L K + Y L+ + Sbjct: 362 DGTRAAKM------PEQLSAKTKE----ARWHRTMALQKQIAADVSKTYVGRTLRVLVEE 411 Query: 658 ALEAMGKKHLIGSRRDCLVPAP 679 A G+ VP Sbjct: 412 PGVARGEADAPDIDGRVYVPRE 433 >UniRef50_A2CB74 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=20 Tax=cellular organisms RepID=MIAB_PROM3 Length = 480 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 75/501 (14%), Positives = 155/501 (30%), Gaps = 77/501 (15%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHASRI 313 + + C NK + + P E VL + + ++ +Y++ R Sbjct: 32 WIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQKVYSYLGRQ 91 Query: 314 LHHE-TNPG------------CARALMQKHGDRYVWINPPAIPLSTE---EMDSVFALPY 357 + T+P AL+++ + + + P ++D+ + Sbjct: 92 ARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQVDNGQQVVA 151 Query: 358 KRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA 417 H I VN++ GC C++C + G+ QSRS ++I EIE Sbjct: 152 TDDNHILEDLTTARRDSTICAWVNVIYGCNERCTYCVVPSVRGKE-QSRSPEAIRLEIEG 210 Query: 418 IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 + L G + Y E +L Sbjct: 211 LAARGFREI----TLLGQNIDAYGRDLPGITPEGR-----------------RQNTLTDL 249 Query: 478 YRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK 537 D++GI++I A+ +L V + I + + L M + Sbjct: 250 LHHIHDVEGIERIRFATSHPRYFTERLIEACFDL--PKVCEHFHIPFQSGDNDVLKAMAR 307 Query: 538 PGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQ 597 + +R++ + + ++ + + I A PG D N +++ F Sbjct: 308 --GYTVERYRRIVNRI-RELMPDAAISTDVIVAFPGETDAQFQNTLNLVEEVGFDQVNTA 364 Query: 598 NFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQ 657 + P P + T ++ + P V K ++ ++L N + R Sbjct: 365 AYSPRPNTPAAT--WSNQLPE-----------VVKVERLKQL-----------NALVERV 400 Query: 658 ALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPA----- 712 AL+ + G L ++ ++ + R R + R +P Sbjct: 401 ALQRNSRYS--GKVEQVLAEGINPKKPQQLMGRTRTNRLTFFAAEGPQSCRYSPGDLVDV 458 Query: 713 --TAKKASSTQSRPVNAGAKK 731 + +A S P + + Sbjct: 459 QINSVRAFSLSGTPCDQTRSR 479 >UniRef50_P54462 Putative methylthiotransferase yqeV n=22 Tax=Bacteria RepID=YQEV_BACSU Length = 451 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 96/282 (34%), Gaps = 53/282 (18%) Query: 365 YGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 Y +PA+ + R S+ I GC C+FC I G +++SR + +I + + + D Sbjct: 131 YEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARG-LLRSRDPEEVIKQAQQLVD--A 187 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR- 482 G+ ++ L G Y K L Sbjct: 188 GYKEIV--LTGIHTGGYGEDMKDYN-------------------------FAKLLSELDT 220 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 ++G+K+I I+S I E + + + +L I + L +M + + Sbjct: 221 RVEGVKRIRISSIEASQITDEVIEVLDR--SDKIVNHLHIPIQSGSNTVLKRMRR--KYT 276 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + F + + K + I PG +E+ + ++K+H+F V + Sbjct: 277 MEFFADRLNKLKKAL-PGLAVTSDVIVGFPGETEEEFMETYNFIKEHKFSELHVFPYSKR 335 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL 644 + M + V + K R+H+ + Sbjct: 336 TGTPAARM----------------EDQVDENVKNERVHRLIA 361 >UniRef50_B5YKW2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=MIAB_THEYD Length = 431 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 101/302 (33%), Gaps = 47/302 (15%) Query: 358 KRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA 417 P A N + + ++ VNI+ GC C++C + G+ +SR D II EI Sbjct: 126 DENPEVANINLPVKRKDCVKAWVNIIYGCNNYCTYCVVPYTRGKE-RSRPVDDIIKEISL 184 Query: 418 IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 + + L G N Y + L Sbjct: 185 LAEQGYKEV----TLLGQNVNSYKD---------------------------GNTNFPLL 213 Query: 478 YRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK 537 + ++GIK+I + D++ E +K+ + ++ + + L M + Sbjct: 214 LEKVEKIEGIKRIRFITSHPKDLSKELVDVMKDY--KKICEHIHLPLQAGSNKILKLMNR 271 Query: 538 PGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQ 597 +Y+ + E + ++A + + I P + ED LK+ RF Sbjct: 272 --KYTYEEYFEKI-CWLREAIPDIAITSDIIVGFPQEQHEDFEKTINALKEIRFDGIFAF 328 Query: 598 NFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQ 657 F P + + G+ SE+V + + +L + + I++ Sbjct: 329 KFSPRLGTAAAKL----------DGHISEEVKAARLIEVLKLQDEITERKNKRLEGKIQE 378 Query: 658 AL 659 L Sbjct: 379 VL 380 >UniRef50_Q8H0V1 CDK5RAP1-like protein n=12 Tax=Viridiplantae RepID=CK5P1_ARATH Length = 640 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 96/310 (30%), Gaps = 39/310 (12%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I V++MRGC C+FC + GR +SR +SII E+ + ++ L G Sbjct: 285 SITAFVSVMRGCNNMCAFCIVPFTRGRE-RSRPVESIIREVGELWESGVKEV----TLLG 339 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y + S + C + +L R + S Sbjct: 340 QNVNSYNDDSADRESGANW-EYSEGFSSRCKVKNM-GLRFADLLDRLSVEFPEMRFRFTS 397 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTY 553 D E +++ H++ + + + L +M + +Y + + Sbjct: 398 PHPKDYPDELLYLMRD--RHNICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSI 455 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + FI+ G +E+ ++ + + + + ++ Y Sbjct: 456 IPDVA----ITSDFITGFCGETEEEHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTD 511 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 VP+ KQRRL + + + + +GS + Sbjct: 512 D---------------VPEEVKQRRLTELIDAFRE----------TTGPCYDSQVGSTQL 546 Query: 674 CLVPAPTIEE 683 LV P Sbjct: 547 VLVEGPNKRA 556 >UniRef50_B5Y8R7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=MIAB_COPPD Length = 426 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 58/335 (17%), Positives = 105/335 (31%), Gaps = 64/335 (19%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 E V+IM+GC C++C + GR +QSR +SI+ E+ D V L Sbjct: 132 EKHSVYVSIMKGCDDFCTYCIVPFTRGR-VQSRDPESILEEVRVCVDNGA----VEITLL 186 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y ++L R + G+++I Sbjct: 187 GQNVNDYGKDLSGW-------------------------DFVSLVERVATIDGVRRIRFM 221 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDT 552 S + +D + L V Y + + ++ L +M K G + Sbjct: 222 SPHPANFKKDDITRLANL--PQVAPYYHLPLQSGDDEILRRMNRKYTTGEFAELVGFIRE 279 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 + I PG DE N +L+K +F + + + P P + Sbjct: 280 SVPNVA----IGTDLIVGFPGESDEHFQNTFKFLEKMQFDVVYMAIYSPRPGTAAA---- 331 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 + E FVP + R + L +++ + + +G+ + Sbjct: 332 -----------RQETSFVPAEVAKARYDELL----------RLQEKISYSINQRYVGTLQ 370 Query: 673 DCLVPAPTIEEMREARRQNRNTRPALT--KHTPMA 705 + L+ + R N T +H Sbjct: 371 EVLIDREDKTTGKFIGRTPTNKTVVFTSIRHVSPG 405 >UniRef50_UPI0001C36EE1 (dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36EE1 Length = 456 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 48/334 (14%), Positives = 95/334 (28%), Gaps = 60/334 (17%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + SV +M GC C++C + GR +SR IINE+ + L G Sbjct: 163 SFKASVPVMFGCNNFCTYCIVPYVRGRE-RSRQPQDIINEVRGLVRDGYKEIM----LLG 217 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y + N L R ++G I S Sbjct: 218 QNVNSYGKDLE------------------------NGMTFPQLLRELDKIEGDFWIRFMS 253 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 D + I + V +L + + L +M + + +++ E D Sbjct: 254 SHPKDATKKLADAIFDCTK--VAKHLHLPVQSGSNDVLRRMNR--RYTVEKYMETVDYIR 309 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 ++ + L I P +DED +++ ++ + + M Sbjct: 310 QR-DPDFSLTTDLIVGFPDEKDEDFEATLDIIRRVKYDNIYSFIYSKRTGTKAAEM---- 364 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 D + +K R+ + L +++ + + K IG Sbjct: 365 ------------DDPITDEEKGMRMRRLL----------EVQREISSEHYKRFIGRTMRV 402 Query: 675 LVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 L + ++ + + Sbjct: 403 LADGKAKKREGWLTGKSSEFIIVEFEGDSSLIGQ 436 >UniRef50_Q8TX78 Predicted Fe-S oxidoreductase n=1 Tax=Methanopyrus kandleri RepID=Q8TX78_METKA Length = 435 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 63/432 (14%), Positives = 120/432 (27%), Gaps = 55/432 (12%) Query: 213 PISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQ 272 P A + +E S + + D + L D + +Q Sbjct: 8 PEYYTYGAIVVAGVCEEHGHSTILRRSPDPEALKRADVLILSLHTTLHLLDEDILEIARQ 67 Query: 273 EAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDK----VLYAHASRILHHETNPGCARALMQ 328 + + ++L F K + L E + + Sbjct: 68 AHEFGKPVIVGGPVSQVPELVLERFPNAIVAKGEAETGLPPLLQTLEDEGDFEDVEGIAL 127 Query: 329 KHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFG 388 V P ++D L R + RGC G Sbjct: 128 LRDGEIVDTGWPP----PADLDGPSPLKVPRDLGRQDVRGA-------NVYIETHRGCPG 176 Query: 389 GCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPR 448 C+FC + E GR ++ + ++++ E+ + + G T Y Sbjct: 177 ACTFCQVPEFFGRRVRWKPVEAVLEEVRELTRGGARRFA----ISGGTVTTYGD------ 226 Query: 449 AEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI 508 + E + L +R DL G + + A VR D+ + Sbjct: 227 ---------------------DEEDFVELLKRLADLLGRENVS-APDVRADLL---NERL 261 Query: 509 KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFI 568 E + G++ + E + L M K + D E + ++ G + FI Sbjct: 262 LEAIRDYTIGWIFLGIESGSDRILRAMRKGI--TVDDVCEAVE-LARTVGVR--VAGSFI 316 Query: 569 SAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV 628 +PG ++D+ L + + P P + + E + Sbjct: 317 VGYPGETEDDLEATEELLTELNLDDVFINLAEPIPGTELGRLVTELPEEEIPVLRPGEQL 376 Query: 629 FVPKGDKQRRLH 640 GD+ +L Sbjct: 377 ETEAGDRALQLQ 388 >UniRef50_B6GBU3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6GBU3_9ACTN Length = 453 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 84/310 (27%), Gaps = 46/310 (14%) Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPT 436 V IM GC CS+C + GR +SR + I++E+ + L G Sbjct: 155 HAWVPIMTGCNNFCSYCIVPYVRGRE-KSRPMEEIVDEVTGLVRQGVRSV----TLLGQN 209 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 N Y S L RR + G+++I S Sbjct: 210 VNSYGRDHGSA------------------------PRFAELLRRVGET-GVERIYFTSSH 244 Query: 497 RYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTYSK 555 D+ E I E+ V L +A + L M K Y + Sbjct: 245 PKDLLPETIDAIAEV--PAVMPQLHLAVQSGSSRILKLMNRKYTREQYLDLVDRVRDRIP 302 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 L I PG +ED + + +F + + + Sbjct: 303 DIA----LTTDIIVGFPGETEEDFEQTVTLVDEAKFAQAFTFIYSKRAGTPAAEI--DDP 356 Query: 616 NPLAKI-GYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR-D 673 P + I V + + L P++ + L G + Sbjct: 357 TPRSVIQQRFDRLVRHVETTAFDYNQRFL-----GTTVPMLIEGTSKKNDAVLQGKSPWN 411 Query: 674 CLVPAPTIEE 683 V P E Sbjct: 412 QTVHCPVPEG 421 >UniRef50_A6LSR6 Ribosomal protein S12 methylthiotransferase rimO n=65 Tax=Bacteria RepID=RIMO_CLOB8 Length = 465 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 89/282 (31%), Gaps = 42/282 (14%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 + I GC C++C I + G+ +SR ++IINE + ++ +I Sbjct: 168 AYIRIAEGCNNFCTYCIIPKIRGK-FRSRKMENIINEARDLSESGVKEIILI----AQDT 222 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 +Y + L + ++GI+ I + Sbjct: 223 TLYGSDIY------------------------GKKNLHVLLKELSKIEGIEWIRVLYCYP 258 Query: 498 YDIAVEDPRYIKEL-ATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ 556 +I I E+ V YL I +H + L M + ++ Sbjct: 259 EEIY---DELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSK--KDIINKI-QILRE 312 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 E + FI P DED + +LK+++ + + M G+ Sbjct: 313 RVPEIVIRTTFIVGFPNETDEDFNEIIDFLKEYKLEKVGAFTYSQEEDTPAAKM--DGQI 370 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQA 658 + ED+ + + + ++K + ++ + Sbjct: 371 DEEIKEKREEDLMLLQKNISEEINKL----KIGKLYDILVEG 408 >UniRef50_A6DMH4 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMH4_9BACT Length = 452 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 62/456 (13%), Positives = 126/456 (27%), Gaps = 78/456 (17%) Query: 260 PCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHASRIL-HHE 317 C N + + + + + ++L + + + ++ ++ Sbjct: 12 GCQMNDRDSEAVEMDLLKSGYEITTEEKDADVIILNTCSVRDQAERKALGKVGSLIKLRR 71 Query: 318 TNPGCARALM----QKHGDRYVWIN---------------PPAIPLSTEEMDSVFALPYK 358 NP ++ Q D V N P I S + D++ Sbjct: 72 KNPKLQVGVIGCMAQSRADDIVEKNAHVNFVAGTDQLHKIPELIEKSKDTEDALIETGLS 131 Query: 359 RVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 R N + SV IMRGC C++C + G+ +SR+ SII E++A+ Sbjct: 132 RDIMERLDNHP---EGQMNASVAIMRGCNEYCTYCIVPFTRGQE-KSRTIASIIAEVKAL 187 Query: 419 RDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLY 478 + G Y L + P L Sbjct: 188 SEKGVREIMY----LGQNITAYGLIEARRD----------------RTFNKEVSPFAALL 227 Query: 479 RRARDLKGIKKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMK 537 R ++GIK+I S + I +A + + + L M + Sbjct: 228 RETAKIEGIKRIRFTSPHARYF---NDDLIDTIAAEPKICRAIHFPLQSGSNRLLKVMRR 284 Query: 538 PGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQ 597 + + F + ++ + I PG +ED + F + Sbjct: 285 --RHTAEEFLSWINKMKERIDGITF-TTDLIVGFPGETEEDFKATRDMCNEIDFDQQFIF 341 Query: 598 NFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQ 657 + + M + + K R L + + Sbjct: 342 RYSTRKNTPAAQM----------------PNQLDEETKIERNQILL---------KDLEE 376 Query: 658 ALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRN 693 L ++ +G+ + +V + + + N Sbjct: 377 RLTHKNEQ-RVGTIEEIMVEGVSKRNDDKWTGRTTN 411 >UniRef50_Q72J39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=8 Tax=Deinococci RepID=MIAB_THET2 Length = 465 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 73/472 (15%), Positives = 132/472 (27%), Gaps = 81/472 (17%) Query: 243 DTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKG 302 D PG+ + C N+ + E +VL+ + Sbjct: 17 DPPGRPGGAMRAHIITYGCQMNEYDSHLVASELVSLGWELVDSVEEADFVLVNTCAVRGK 76 Query: 303 DKVLYAHASRILHHETNP-----GCARALMQKHGDR--------YVWINPPAIPLSTEEM 349 L E G L Q + V + P A+ E + Sbjct: 77 PVEKVRSLLGQLRKEKERRGLLIGMMGCLAQLDEGQQMAKKFGVDVLLGPGALTSLPEAL 136 Query: 350 ---DSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 + F L + R Y P + V I+RGC C++C + G + SR Sbjct: 137 KANERFFDLTF-REDVLDYIPP--PPKGALSAHVTIIRGCNHHCTYCIVPTTRGPEV-SR 192 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 D I+ EIE ++ L G N Y Sbjct: 193 HPDLILKEIELLKQAGVVEV----TLLGQNVNSYGKD----------------------- 225 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEH 526 L R + GI ++ + + + I E T + Y+ + + Sbjct: 226 -QPGFPSFAELLRMVGGM-GIPRVRFLTSHPVNFTDDIIEAIAE--TPAICRYIHLPVQS 281 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 + L +M + + + E ++A + L I PG +ED Sbjct: 282 GSDRVLRRMAREYRRA--HYLERIRKI-REALPDAVLSTDIIVGFPGETEEDFQETLSLY 338 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRY 646 + + + + P P + + +P+ K RL + + + Sbjct: 339 DEVGYDQAYMFIYSPRPGTPAYKHFQ----------------DLPREVKVERLMRLIEKQ 382 Query: 647 HDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 698 + + + +G + LV EE + +R P L Sbjct: 383 KEWSYRRNLE----------WVGKTVEVLVRGEAKEEG-FVQGHDRGNHPVL 423 >UniRef50_Q3XWG2 Putative uncharacterized protein n=1 Tax=Enterococcus faecium DO RepID=Q3XWG2_ENTFC Length = 161 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 161/161 (100%), Positives = 161/161 (100%) Query: 579 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 638 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR Sbjct: 1 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 60 Query: 639 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 698 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL Sbjct: 61 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPAL 120 Query: 699 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 739 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR Sbjct: 121 TKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR 161 >UniRef50_Q1Q929 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=534 Tax=Proteobacteria RepID=MIAB_PSYCK Length = 497 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 49/339 (14%), Positives = 94/339 (27%), Gaps = 58/339 (17%) Query: 371 PAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS 430 P E + V+IM GC CSFC + G + SR D ++ EI+++ Sbjct: 190 PRVEGFKAFVSIMEGCSKYCSFCVVPYTRGEEL-SRPLDDVLAEIDSLAAQGVREI---- 244 Query: 431 DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI 490 +L G N Y L + G+++I Sbjct: 245 NLLGQNVNGYRGEKDDGSIC----------------------RFAELLHYVSHVDGVERI 282 Query: 491 LIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELF 550 + + + +L + +L + + L+ M + + D + Sbjct: 283 RYTTSHPLEFTDDIIDAYAQLPE--LVSHLHLPVQSGSNAILAAMKR--NHTIDVYINQI 338 Query: 551 DTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 + K + +L FI PG D+D + K+ F + P + + Sbjct: 339 NKL-KAIRPDIHLSSDFIIGFPGETDQDFQDTLNLAKELNFDHSYSFIYSKRPGTPAAEL 397 Query: 611 YYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 + F K ++ K ++ ++G+ Sbjct: 398 -------------PDDVSFKTKKERLAEFQKVIIDSTLAKTHE-------------MVGT 431 Query: 671 RRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQ 709 LV NTR + + Sbjct: 432 TTRVLVEQVANRHPDCLIGTADNTRTVMFPYDVDKMDEM 470 >UniRef50_B0TIH8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Bacteria RepID=RIMO_HELMI Length = 460 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 126/440 (28%), Gaps = 82/440 (18%) Query: 282 PRPKPWEKTYVLLPSFEKVKGD---------KVLYAHASRILHHETNPGCARALMQKHGD 332 P + +T + L +++ YA E + + + Sbjct: 68 PAKEESIQTILELARYKETGRCRALLVAGCLPQGYAGELAAELPEVDAFFGPGDVPRVTS 127 Query: 333 RYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF 392 + L + D ++ + R+ + V I GC C + Sbjct: 128 IVAEVLRGKRSLEVGKPDFLYD----------HTMPRVLSTPFHYAYVKIADGCDNRCGY 177 Query: 393 CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQT 452 C+I GR +SRSE+SI+ E ++ D +I Y + Sbjct: 178 CAIPNLRGR-FRSRSEESIVEETRSLVDRGIQEALLI----AQDTTCYGVDRYGEF---- 228 Query: 453 CRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELA 512 L + + G++ I + P I+ +A Sbjct: 229 --------------------RLAQLIGKLASIDGLRWIRLMYCYPSHFT---PELIEAMA 265 Query: 513 TH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAH 571 V Y+ + +H ++ L M + D + L T ++ + FI Sbjct: 266 AEPKVCRYVDLPLQHADDELLRSMNRHAG--VDEIRRLIRTLRERL-PGLAIRTSFIVGL 322 Query: 572 PGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVP 631 PG +E L +L + RF + + + + VP Sbjct: 323 PGETEEKFQRLLDFLAEMRFDRVGIFTYSREENTPAGKLA----------------DQVP 366 Query: 632 KGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQN 691 + K+ R H+A+ +++Q + ++ IG + LV + R Sbjct: 367 EEVKEERYHRAM----------VLQQEISLSIQQEWIGKTLEVLVEEEVAPGLYRG-RSE 415 Query: 692 RNTRPALTKHTPMATQRQTP 711 R R Sbjct: 416 REAPEVDGHIEFKGRHRMIG 435 >UniRef50_B8CXK7 MiaB-like tRNA modifying enzyme n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXK7_HALOH Length = 438 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 57/332 (17%), Positives = 111/332 (33%), Gaps = 54/332 (16%) Query: 364 AYGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 Y + I E R + I GC CS+C I G ++SR E+S+I E+E + Sbjct: 131 TYEDLNINKVKETTRAYIKIEEGCNQFCSYCIIPYARG-PVRSRKEESVIQEVERLVRAG 189 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 L G Y L + N + + L + Sbjct: 190 VKEIV----LTGTHLGAYGLD------------------------ENNDKALVELIQNLV 221 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKEL-ATHHVGGYLKIAPEHTEEGPLSKMMKPGMG 541 +KG+ +I ++S ++ + I+ + + V +L + + L KM +P Sbjct: 222 KVKGLARIRLSS---LEVTEVNDDLIRIMGSEDKVCPHLHLPLQSGSNTILKKMKRP--Y 276 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 + + FKE D ++ ++ + I PG ++ +K+ F V F Sbjct: 277 TVEEFKETVDKI-RKIIEDIAITTDIIVGFPGEGQKEFNESYNTVKELGFSRLHVFPFSI 335 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA 661 + M + P S+ + R L+K L+ + W +R + Sbjct: 336 RQGTPAARM--KNQVPGDVKKEYSKKM--------RELNKKLMLEYQKRFWGHLRDVIIE 385 Query: 662 MGK-------KHLIGSRRDCLVPAPTIEEMRE 686 + + G+ ++ + Sbjct: 386 DNRDSRTNLLTGVTGNYIKVMIENADDSLRGK 417 >UniRef50_D2LS97 tRNA-i(6)A37 thiotransferase enzyme MiaB n=2 Tax=Bacillus RepID=D2LS97_BACS4 Length = 516 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 95/348 (27%), Gaps = 68/348 (19%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 P +I + VNIM GC C++C + G+ +SR + II E+ + Sbjct: 210 MPRARKGQIQGW------VNIMYGCDKFCTYCIVPYTRGKE-RSRRPEDIIEEVRHLARN 262 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 L G N Y +L Sbjct: 263 GYKEI----TLLGQNVNAYGKDLVDMDYG-----------------------LGDLMDEI 295 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGM 540 R + I ++ + D D I+ LA ++ ++ + + L M + Sbjct: 296 RKID-IPRVRFTTSHPKDF---DDHLIEVLAKGGNLVEHIHLPVQSGNSDVLKLMAR--K 349 Query: 541 GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + + + L K+A I P D + +++ + + Sbjct: 350 YTREEYVTLAKKI-KEAIPHASFTTDIIVGFPNETDAQFEDTLSLVREMEYDSAYTYVYS 408 Query: 601 PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE 660 P + M + +P K+ RL + + + Sbjct: 409 PREGTPAAKM----------------NDNIPMEVKKERLQRL----------NALVNEIS 442 Query: 661 AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 A K G + LV + + + R R K + Sbjct: 443 AEKNKSYQGRVVEVLVEGESKKNPDILAGRTRTNRLVNFKGAKSSIGE 490 >UniRef50_A8ZVH2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=3 Tax=Deltaproteobacteria RepID=MIAB_DESOH Length = 466 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 56/338 (16%), Positives = 104/338 (30%), Gaps = 65/338 (19%) Query: 350 DSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSED 409 D + + + + P + + IMRGC C++C + GR SR+ + Sbjct: 121 DRIVDVEMTAAIDESVHALQGPDSSGVTGFITIMRGCDNFCTYCVVPYVRGRE-TSRAPE 179 Query: 410 SIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDT 469 I++EI A L G N Y + E C Sbjct: 180 HILDEIRARVAGGLREI----TLLGQNVNSYG------QKEGLCS--------------- 214 Query: 470 NHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEE 529 +L R ++ G+ +I + D++ E L + ++ + + + Sbjct: 215 ----FADLLARVNEIDGLHRIRFTTSHPKDLSPELAAAFTSLDK--LCSHVHLPAQSGSD 268 Query: 530 GPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKH 589 L +M + + + E + ++A L I PG ++D + ++K Sbjct: 269 AVLKRMNR--RYTRQAYLEKLH-WLREAQPGMALSTDIIVGFPGETEQDFLQTLDLIEKV 325 Query: 590 RFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHK--ALLRYH 647 R+ + PLA + F K D+ + + ALL Sbjct: 326 RYDSIFAFMYSDRPLAPARA-------------------FDGKVDEAEKQQRIYALLELQ 366 Query: 648 DPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMR 685 + R L G LV + R Sbjct: 367 NRITAEKNR---------ALEGRVEQVLVEGKSKSSGR 395 >UniRef50_C1A8D6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8D6_GEMAT Length = 451 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 73/487 (14%), Positives = 129/487 (26%), Gaps = 65/487 (13%) Query: 252 PHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHAS 311 P Y E C N + P P +L+ + + + Sbjct: 5 PTVYIETYGCQMNVADSELMYGKLVAHGYEPVDAPDGADVILVNTCAIRENAETRVIGRL 64 Query: 312 RILHHETNPGCARAL----MQKHGDRYVWINP--------------PAIPLSTEEMDSVF 353 L P + Q+ G R + PA+ + Sbjct: 65 GELRRYMKPDTIVGVTGCMAQRLGPRVLEQARHVSLVVGPDGYRALPALLDGARRGEKFT 124 Query: 354 ALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIIN 413 A + H Y + +E ++ + + RGC C++C + G +SR D Sbjct: 125 ATDFDLEEH--YEDVVARRFEGVKAWIPVQRGCDYRCTYCIVPFTRGPE-RSRKLDD--V 179 Query: 414 EIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEP 473 E + G + V+ L G T N Y Sbjct: 180 VREVQQVVEQGLSEVV--LLGQTVNSYTDGTHD--------------------------- 210 Query: 474 TINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLS 533 +L R + GI+++ S D + + +AT V ++ + + L Sbjct: 211 FADLLRAVGAVDGIRRVRYTSPHPNDFSDRVIDAMASVAT--VCEHIHLPMQSGSTSMLK 268 Query: 534 KM-MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFR 592 +M + Y A L I PG D + + ++ RF Sbjct: 269 RMLRRYSREEYLDCVARMR----AAIPGLSLTTDIIVGFPGETDAEFEDTLSLCQEVRFD 324 Query: 593 LDQVQNFYPSPLANSTTMYYTGKNPLAKI-GYKSEDVFVPKGDKQRRLHKALLRYHDPAN 651 + F P +T M P + V +G + K L Sbjct: 325 DAFMFKFSPREGTPATRMPADWTIPDDVMAARFDRLVKTVRGISRENNLKRL-----GDT 379 Query: 652 WPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTP 711 ++ + L G+ SR V P + + T T Sbjct: 380 VEVLIEKLARDGELWQARSRDFKTVMVPADAGKIGDYLRVQLTGTTGATFTGTPVADAAA 439 Query: 712 ATAKKAS 718 ++ Sbjct: 440 GRRERKP 446 >UniRef50_A7H5G3 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Epsilonproteobacteria RepID=RIMO_CAMJD Length = 439 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 68/411 (16%), Positives = 128/411 (31%), Gaps = 56/411 (13%) Query: 251 IPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHA 310 + Y L C N + + +P + +++ + + K +A Sbjct: 1 MSKLYLMSLGCNKNLVDSEIMLGRLSAYELC--DEPSKADVLIVNTCGFIDSAKKESINA 58 Query: 311 SRILHHETNPGC----ARALMQKHGDRYVWINPPAIPLS----TEEMDSVFALPYKRVPH 362 LH + LMQ++ + + P + E +D + + Sbjct: 59 ILDLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFTGVGDYERIDEMILKKTNLFSN 118 Query: 363 PAY----GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 Y + RI + I GC CSFC+I +GR ++SR +SII E++ + Sbjct: 119 STYLQSENSKRIITGSNSHAFIKIAEGCNQKCSFCAIPSFKGR-LKSRQINSIIAELKDL 177 Query: 419 RDT-VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 F+ + D + L Sbjct: 178 VARGYKDFSFIAQD--------------------------------TSSYLFDKGEKDGL 205 Query: 478 YRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVG-GYLKIAPEHTEEGPLSKMM 536 R +++ IK I A + IK + + Y + +H + L M Sbjct: 206 IRLIDEVEKIKGIRAARILYLYPTSASEALIKRIIASEIFVNYFDMPLQHISDNMLKIMK 265 Query: 537 KPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 + + R KE+ + ++ +L FI HPG + D L ++K F V Sbjct: 266 RGTNST--RLKEMLNLM--KSAPNSFLRTGFIVGHPGESEADFEKLCEFVKDFGFDRVSV 321 Query: 597 QNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV---FVPKGDKQRRLHKALL 644 + + M + K E + + K ++ K L+ Sbjct: 322 FAYSKEEDTAAFDMEQVPFKVINKRLKIIEKIVDEVIEKSFEKEVEQKRLV 372 >UniRef50_A6CGG9 Probable MiaB protein-putative tRNA-thiotransferase n=3 Tax=Planctomycetaceae RepID=A6CGG9_9PLAN Length = 510 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 98/312 (31%), Gaps = 60/312 (19%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + V IM GC CS+C + G QSRS I++E++ + D L G Sbjct: 192 PYQAFVRIMIGCDKFCSYCVVPSTRGPE-QSRSPREILSEVKVLADQGVKEV----TLLG 246 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 T N Y +L D++GI +I + Sbjct: 247 QTVNSYKHTQDGKLF-----------------------RLSDLLYLIHDVEGISRIKFVT 283 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTY 553 D+ + I++L YL + +H L M + + Y + + Sbjct: 284 SYPKDMTTDLLEAIRDL--PKATRYLHVPLQHGCNDVLKVMKRGYTVEDYREMMQRVNEI 341 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + FI HPG +E +++ RF+ + + P + + Sbjct: 342 LPGC----SVSSDFIVGHPGETEESHQLSLESIREFRFKNSFIFKYSERPGTKAAERF-- 395 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 +P K+RR ++ L ++ + IG + + Sbjct: 396 -------------KDEIPDAVKKRRNNEMLA----------VQNQISEEDNAEFIGKQVE 432 Query: 674 CLVPAPTIEEMR 685 LV P+ + Sbjct: 433 VLVEGPSKSAQK 444 >UniRef50_A4EC90 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC90_9ACTN Length = 310 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 51/313 (16%), Positives = 83/313 (26%), Gaps = 46/313 (14%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 V IM GC C++C + GR +SR + I++E+ + L Sbjct: 9 TQYHAWVPIMTGCNNFCTYCIVPYVRGRE-KSRPFEEIVDEVTGLVRQGVREI----TLL 63 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y +L R D G+++I Sbjct: 64 GQNVNSYGRDL------------------------FGKPRFADLLRAVGDT-GVERIFFT 98 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDT 552 S D+ E + E T V L +A + L +M + Y + Sbjct: 99 SSHPKDLLPETIDAMAE--TPAVMPQLHLAVQSGSTRILKEMNRRYTREDYLGLVDRIRN 156 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 L I PG +ED + R+ + + + Sbjct: 157 RMPDIA----LSTDIIVGFPGETEEDFEQTLSLAETVRYAQAYTFIYSKRAGTPAAEI-- 210 Query: 613 TGKNP-LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 P + + V V + L P + + L+G Sbjct: 211 DDPTPHEVILERFNRLVKVIETTAHEYNQGEL-----HTVVPALIEGTSKKNDAVLLGKS 265 Query: 672 RD-CLVPAPTIEE 683 V AP E Sbjct: 266 PKNQTVHAPIPEG 278 >UniRef50_B3ES11 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=28 Tax=cellular organisms RepID=MIAB_AMOA5 Length = 486 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 67/497 (13%), Positives = 141/497 (28%), Gaps = 71/497 (14%) Query: 226 IVKEALPGWSGVDSTRLDTPGKIDPIPHP-YGEDLPCADNKPVAPKKQEAKAVTVQPPRP 284 + + D + I Y E C N + Sbjct: 8 DLIKTEKPEQIEDFLPNEEDITSPTITRNLYVESYGCQMNIADSEVVVSILRPHGFEITD 67 Query: 285 KPWEKTYVLLPSFEKVKGDK------VLYAHASRILHHETNPG------CARALMQKHGD 332 + + + + DK + +++ + A L Q + Sbjct: 68 TYEKADVIFINTC--AIRDKAEQTVRKRLSQFNQLKRRNPDLVIGVLGCMAERLKQTLLE 125 Query: 333 RYVWINPPAIPLSTEEMDSVFA---------LPYKRVPHPAYGNARIPAY-EMIRFSVNI 382 ++ A P + ++ + A + + I + ++I Sbjct: 126 EEKLVDLVAGPDAYRDLPRLLATVDSGHKAINTFLSREETYADISPIRLNSNGVSAFISI 185 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 MRGC CSFC + GR +SR SI+ E + + L G + Y Sbjct: 186 MRGCDNMCSFCVVPFTRGRE-RSRDPYSIVKEATELFEQGYREV----TLLGQNVDSYKW 240 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 + + EQ V L + +I ++ DI Sbjct: 241 SPNTDKKEQPTTPQEGVV------------NFAQLLAMVAQIHPDLRIRFSTSHPKDITD 288 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQY 562 + IK ++ Y+ + + L M + ++ + + + + G++ Sbjct: 289 QVLYTIKAY--DNICKYIHLPVQSGSSRVLKLMNRTYDRAW--YLQKIEDIRRIVGEDCG 344 Query: 563 LIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIG 622 + I+ +ED + ++ ++ + + P + Y Sbjct: 345 ISSDMIAGFCTETEEDHQDTLSLMEHIKYEFSYMFYYSERPGTLAARKYADD-------- 396 Query: 623 YKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE 682 VP K+RRL + + D + L+ IG LV P+ + Sbjct: 397 -------VPLAVKKRRLQEII----DKQRQHSFEKNLKD------IGKVYQVLVEGPSKK 439 Query: 683 EMREARRQNRNTRPALT 699 E + +N + + Sbjct: 440 SDIEWQGRNSANKVVVF 456 >UniRef50_C1F0W4 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F0W4_ACIC5 Length = 448 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 62/475 (13%), Positives = 130/475 (27%), Gaps = 83/475 (17%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRIL 314 Y E C N + K + +L + DK +R+ Sbjct: 16 YLETFGCQMNVHDSEKVIGTLQQQGYTQVEEEAAADLILYNTCS--IRDKAEQKVFNRLN 73 Query: 315 HHETNPGCARA------LMQKHGDRYVWINP--------------PAIPLSTEEMDSVFA 354 ++ + + Q+ G++ P P + + E S Sbjct: 74 DYKKLHAQGKRFGVLGCVAQQEGEKIFERAPYVSLVSGSASYRKLPEMLVQLEAGASRIT 133 Query: 355 LPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 R + R + I+ GC C++C + G+ +SR S++ E Sbjct: 134 GLDDRQTEETFETEFTARSNAHRGYITIIEGCDKFCAYCVVPYTRGKE-RSRKSSSVLAE 192 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 + + L G N Y H + Sbjct: 193 ARRMAEAGYTEI----QLLGQNVNSY-------------------------HDPEGKKSF 223 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 L ++ GI ++ + D + I + + ++ + + L Sbjct: 224 AELLAAVGEVPGIVRVRFTTSHPRDFTRDIVEAIDAV--PALCDHVHLPIQSGSSRVLQL 281 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M + + +++ E ++ K A + + I PG +D + ++ Sbjct: 282 MQR--EYTREQYLEKI-SWIKTARRPISMTTDMIVGFPGETPDDFEETITLAAEVQYDGI 338 Query: 595 QVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPL 654 + P P + M +P+ +K RL L R + Sbjct: 339 FAFKYSPRPNTPAIHM----------------SDSIPEEEKSMRLQILLDRQRE------ 376 Query: 655 IRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQ 709 ++ + +G D +V + R ++N T P+ Sbjct: 377 ----IQRINYARHVGEVMDVMVEGHNHARGQVIGRTSQNKTLNFTTSQPILPAPG 427 >UniRef50_D2MLZ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Bulleidia extructa W1219 RepID=D2MLZ6_9FIRM Length = 480 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 61/488 (12%), Positives = 130/488 (26%), Gaps = 82/488 (16%) Query: 234 WSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVL 293 + D ++ Y + C N + P + +L Sbjct: 25 TAYRDFQMSLEANRLGQDKKYYVKTYGCQANVRDGESLSGMLEMMGFTYAEVPEKADVIL 84 Query: 294 LPSFE-KVKGDKVLYAHASRILHHETNPGC---------------ARALMQKHGDRYVWI 337 + + ++ + A + + + L+QKH + Sbjct: 85 FNTCAIRRAAEEKVMAEIGNLKYLKKEKPNIIFVLCGCMAQEKDVVEELLQKHPQLDLIF 144 Query: 338 N-----PPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSF 392 L + + + + + + VNIM GC C++ Sbjct: 145 GTHNLYRFPALLQEVMVKKIQKVEVYSQEGEVVESLPVKRSMSSKGFVNIMYGCDKFCTY 204 Query: 393 CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQT 452 C + G+ +SR I+ E+ A++ + L G N Y Sbjct: 205 CIVPYTRGKE-RSRRMKDILEEVSALKKSGRKEVV----LLGQNVNAYGKDLHMEDG--- 256 Query: 453 CRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELA 512 +L R D GI++I + D + E Sbjct: 257 ---------------------FTDLLRAISDT-GIERIRFYTSHPRDYRSSLIDLMAE-- 292 Query: 513 THHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHP 572 ++ +L + L +M + + + + L+D K+ I P Sbjct: 293 RKNIMPFLHFPVQSGSNEILKRMARG--YTVEHYISLYDEMMKKI-PNMTFTTDIIVGFP 349 Query: 573 GTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPK 632 G DED ++ ++ + + P + +M + + K Sbjct: 350 GESDEDFEKTMNLVEHCQYDMAYTFLYSPRVGTPAASMTDS----------------ISK 393 Query: 633 GDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNR 692 K+ RL + +R+ K +L G L + + + Sbjct: 394 EVKKARLQRL---------NQRLREIAAKKNKVYL-GRIVRVLCEGISKKNEKIYAGYTE 443 Query: 693 NTRPALTK 700 + + Sbjct: 444 DNKLVNFS 451 >UniRef50_Q057G5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=4 Tax=Proteobacteria RepID=MIAB_BUCCC Length = 435 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 42/299 (14%), Positives = 84/299 (28%), Gaps = 41/299 (13%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 V IM GC CSFC + G+ + SR+ II+EI + L G Sbjct: 136 KFSSFVTIMEGCNKYCSFCIVPYTRGKEV-SRNNKKIISEIIELSKKGVREI----TLLG 190 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y + + +L ++ I +I + Sbjct: 191 QNVNAYKFS---------------------DTFNKKNYSFSDLLYSISEIPRIDRIRFIT 229 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM-GSYDRFKELFDTY 553 + K++ + +L + + L M + Y+ Sbjct: 230 SHPVEFNNNIIEAYKKI--PKLTNFLHLPVQSGSNKILKLMKRGYTIEKYENIVNKIKKI 287 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + + FI PG ED ++ K F + P ++ + Sbjct: 288 RPKI----NISSDFIIGFPGETKEDFQKTIYFISKINFDTSYSFIYSKRPRTRASKL--- 340 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 + K + ++ +Q+ +A ++ + + + L G Sbjct: 341 --EDNVTMEEKKKRLY---KVQQKINQQAFQWKRRSTEQIVLVEGISKNNIQELYGRTE 394 >UniRef50_B7GKD2 2-methylthioadenine synthetase n=4 Tax=Firmicutes RepID=B7GKD2_ANOFW Length = 467 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 98/281 (34%), Gaps = 53/281 (18%) Query: 365 YGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 Y +PA+ + R S+ I GC C+FC I G +++SR +I + + + D Sbjct: 148 YEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARG-LMRSRDPKEVIRQAQQLVD--A 204 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 G+ ++ L G Y K L R + Sbjct: 205 GYKEIV--LTGIHTGGYGEDMKDYN-------------------------FAMLLRDMDE 237 Query: 484 -LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 +KG+K++ I+S I E +++ + + +L I + L +M + + Sbjct: 238 QVKGLKRLRISSIEASQITDEVIDVLRQ--SDKIVRHLHIPLQSGSNAVLKRMRR--KYT 293 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + F E ++ + + I PG +E+ + ++++ RF V + Sbjct: 294 TEFFAERLARL-REVFPDLAVTSDVIVGFPGETEEEFMETYEFIREQRFSELHVFPYSKR 352 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 + M V + K R+H+ + Sbjct: 353 TGTPAARM----------------PDQVDEEVKNERVHRLI 377 >UniRef50_UPI00006CFA0B RNA modification enzyme, MiaB family n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFA0B Length = 604 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 76/539 (14%), Positives = 156/539 (28%), Gaps = 73/539 (13%) Query: 196 NGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKI----DPI 251 N + + + + ++++D+ +K+ D P D Sbjct: 16 NNYKAIPSGLKKYFSTQQKADLKDIPMLDEFMKQQREPIKESDLEETQIPYLNKTQFDSQ 75 Query: 252 PHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSF---EKVKGDKVLYA 308 + E C N+ V L + E + Sbjct: 76 KKYFIETYGCQMNESDTEIISGILQKAGFVRESNLDNADIVFLNTCAIREGAENKIWKRL 135 Query: 309 HASRILHHETNPGCARA------------LMQKHGDRYVWINPPA---IPLSTEEMD--- 350 R + L++K+ + + P A +P + +D Sbjct: 136 ENIRAYKRKEKKQLITGVLGCMAERLKDKLVEKNKVVDIIVGPDAYRDLPRLIQSLDPST 195 Query: 351 SVFALPYKRVPHPAYGNARIPAYEMI---RFSVNIMRGCFGGCSFCSITEHEGRIIQSRS 407 +++ + Y + +P + + V+IMRGC CSFC + GR +SR Sbjct: 196 DDYSINVQLSLEETYAD-IVPVRQNPDSCQAFVSIMRGCNNMCSFCIVPFTRGRE-RSRD 253 Query: 408 EDSIINEIEAIRDTVPGFTGVISDLGGPTANMY---------MLRCKSPRAEQTCRRLSC 458 SI+ E++ + + L G N Y L + + +L Sbjct: 254 IQSIVEEVKMLANQGVKEI----TLLGQNVNSYFDKEAEGYEDLDHLNSEGFKETFKLRK 309 Query: 459 VYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGG 518 V + + +L + S D + IK+ ++ Sbjct: 310 VIRALLNSLLGKGARFAHLLEEVAKAAPEVRFRFTSPHPKDFPDPVLQVIKKY--PNIAK 367 Query: 519 YLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDED 578 L + + L++M + S + + L D + L FI G D++ Sbjct: 368 NLHMPAQSGNTEMLTRMRR--NYSRENYINLVDHIKQTI-PGITLSSDFICGFCGETDQE 424 Query: 579 MVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRR 638 + L+ ++ + + ++ Y VP+ K++R Sbjct: 425 FQDTLTLLEYVKYENAFLFAYSLREKTHAHRHY---------------QDDVPEEVKKQR 469 Query: 639 LHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPA 697 L + + +H ++ +G LV E + R + N R Sbjct: 470 LQQMIDVFHKNQELVNKQE----------VGRIHLVLVEGKGKFENQIRGRTDTNKRVI 518 >UniRef50_B0KA65 MiaB-like tRNA modifying enzyme n=46 Tax=Clostridia RepID=B0KA65_THEP3 Length = 467 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 105/344 (30%), Gaps = 66/344 (19%) Query: 364 AYGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 Y + AY E R + I GC C++C I G ++SR +++E++ D+ Sbjct: 161 EYEEFGVTAYTERTRAYIKIQDGCNQYCTYCIIPYARG-PVRSRDPKKVLDEVKRFADS- 218 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 G+ ++ L G Y K+ +++ + Sbjct: 219 -GYKEIV--LTGIHIASYGKDLKNIG-------------------------LLDIIKMIH 250 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKM-MKPGM 540 ++ GIK+I ++S + ++KE+A + + ++ + + L +M + Sbjct: 251 EIDGIKRIRLSS---IEPTFLTEEFVKEIANLPKMCRHYHVSLQSGCDETLKRMGRRYTT 307 Query: 541 GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 Y + Y K + + PG +E+ + ++++ F V + Sbjct: 308 KEYKSVIDRLREYIKDVA----ITTDVMVGFPGETEEEFLKTYKFVEEICFSKMHVFKYS 363 Query: 601 PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE 660 + V K+ R K L+ + + + Sbjct: 364 RRKGTRAYNF----------------PNQVANHIKEDRSKK-LIELSNRCEYKFME---- 402 Query: 661 AMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPM 704 IG + L P N K Sbjct: 403 -----SFIGKTLEVLFEQPVKNMEGYVEGLTDNYLSIAVKGDIK 441 >UniRef50_Q6MLC6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Bdellovibrio bacteriovorus RepID=MIAB_BDEBA Length = 453 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 64/460 (13%), Positives = 125/460 (27%), Gaps = 82/460 (17%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE--KVKGDKVLYAHASR 312 Y C N + + P P + + +++ S + KV + Sbjct: 24 YISTYGCQMNVNDTERMYALLEMQNFVPVTDPKKASLIIINSCSVREKPVHKVYSEVGTY 83 Query: 313 ILHHETNP---GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALP------------- 356 NP + + + P I D + +LP Sbjct: 84 KYMKRKNPELKIGVGGCVGQQEKENLMKTQPMIDFVFGT-DQIDSLPQLVAKSFAGERRL 142 Query: 357 -YKRVPHPA-YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 R H + Y + + VNI +GC C+FC + GR +SR I+ + Sbjct: 143 VNSRFEHRSPYHIETLVRNPGVATYVNITKGCDNFCTFCVVPYTRGRE-KSRPVQHILTD 201 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 I + L G N Y Sbjct: 202 IRHLVKRGVKEV----TLLGQNVNSYQGD--------------------------EGIDF 231 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 +L + +++I + D + + E ++ + Y+ + + L + Sbjct: 232 ADLLAKVAKETDVERIRYTTSHPKDFNQKLVDVMAE-HSNKIMEYIHLPFQAGSTKVLER 290 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M + + + + E K I PG +ED + + + F Sbjct: 291 MNR--NYTREEYLERIAMIQKGL-PNVCFSTDIIVGFPGETEEDFQDTLNMVTEVGFETI 347 Query: 595 QVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPL 654 ++ P P + + +P+ K RL++ Sbjct: 348 FAFSYSPRPFTKAAKF----------------EDQLPEDVKNERLNRLF----------D 381 Query: 655 IRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNT 694 + +A+ K G+ LV + + R N Sbjct: 382 VHEAMAFERVKRYEGTTMKVLVENVDRDHGKMQGRSTGNK 421 >UniRef50_Q1IPQ5 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=RIMO_ACIBL Length = 504 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 65/421 (15%), Positives = 125/421 (29%), Gaps = 69/421 (16%) Query: 260 PCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETN 319 P D + + A + PR +V+L S + K A Sbjct: 112 PEVDAVVGTGELEAILAASGIEPRKSEANSPFVILNSTSASQQLKSGIAD---------- 161 Query: 320 PGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALP-YKRVPHPAYGNARIPAYEMIRF 378 ++ R+ T+ +V LP Y R+ A Sbjct: 162 --RPEGAAREEAGRFA---------RTDWDGAVADLPNYLYDE----NTPRVLATPKYMA 206 Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 + + GC CSFC I + G+ +SR +S++ E E + +I G Sbjct: 207 YIKVAEGCDHPCSFCIIPQLRGK-FRSRRFESVVAEAERLAKQGVKEITLI----GQDTT 261 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y L R ++ ++ + Sbjct: 262 CYGEDLGLKDG------------------------LAQLLERLAQIEELQWVRFLYAYPN 297 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAG 558 I + I + + Y+ + +H+ L +M + G F + + ++ Sbjct: 298 KITKRLLQTIAD--NPKIPKYMDVPLQHSAANVLKRMKRGAHGDI--FLKSIEEM-RRVI 352 Query: 559 KEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPL 618 + L FI PG +ED L ++K + V ++ A + + K P Sbjct: 353 PDLTLRTSFIVGFPGETEEDFNQLCEFVKAAQIDWLGVFSYSDEEGAKAFAL--DEKVPP 410 Query: 619 AKIGYKSEDVFVPKGDKQRRLHKALLRYH-------DPANWPLIRQALEAMGKKHLIGSR 671 +I + + + + ++ KAL+ L+ + AM + G Sbjct: 411 REIERRRKKLMSLQKQISKKKRKALIGREFDVILEGPSEETDLLWEGRTAMHAPEIDGKV 470 Query: 672 R 672 Sbjct: 471 Y 471 >UniRef50_D1AG09 RNA modification enzyme, MiaB family n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AG09_SEBTE Length = 445 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 52/335 (15%), Positives = 96/335 (28%), Gaps = 59/335 (17%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + I SV+I GC C+FC + G +S I+++++ D Sbjct: 151 DDIVASVSITYGCNNYCTFCIVPYVRGME-RSVPMREILDDVKQYADKGYKEILF----L 205 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y E L +A +++G + Sbjct: 206 GQNVNSYGSDRIEM-----------------------GEDFAGLLTKAANIEGDFWLKYI 242 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 S D + I E V L + + L M + + F EL Sbjct: 243 SPHPKDFTDSVIKAIAE--NPKVARMLHLPLQSGSTKILGAMNRGYTK--EEFIELALKI 298 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 K+ + + I PG DED + +++ F + + + + Sbjct: 299 KKEI-PDIGITTDIIVGFPGETDEDFQDTLDVVEQVGFENAFMFMYSKRSGTPAAVL--- 354 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 + VP+ K+ RL + + ++ A K G Sbjct: 355 -------------EEQVPEQVKKERLQQLM----------RLQNARAKEESKKYYGQTLK 391 Query: 674 CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQR 708 LV P+ + + + L K + + Sbjct: 392 VLVEGPSSKNPDMLTGRTSTHKIVLFKGDEELSGK 426 >UniRef50_Q9WZT7 Putative methylthiotransferase TM_0830 n=6 Tax=Thermotogaceae RepID=Y830_THEMA Length = 434 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 93/297 (31%), Gaps = 43/297 (14%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 P Y + + R + + GC C++C+I G I+S+ + E + Sbjct: 123 RPVYEKVKGSFEDRTRSYIKVEDGCDNTCTYCAIRLARGTRIRSKPLEIFKEEFAEMV-- 180 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 + G+ ++ + G Y L + Sbjct: 181 MKGYKEIV--ITGVNLGKYGKDM--------------------------GSSLAELLKVI 212 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGM 540 + G ++ ++S D+ E + K + +L I+ + + L +M K + Sbjct: 213 EKVPGDYRVRLSSINVEDVNDEIVKAFKR--NPRLCPHLHISVQSGSDDVLKRMGRKYKI 270 Query: 541 GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + R + + + I PG D D ++K F + F Sbjct: 271 SDFMRVVDKLRSIDPD----FSITTDIIVGFPGETDADFQRTLELVEKVEFSRVHIFRFS 326 Query: 601 PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQ 657 P P ++ M G P +K + + + D R K ++ ++ + Sbjct: 327 PRPGTPASRM--EGGVPESKKKERLDVLKEKAKDVSIRYRKRII----GKERKVLAE 377 >UniRef50_C8W6X2 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W6X2_ATOPD Length = 468 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 70/464 (15%), Positives = 134/464 (28%), Gaps = 80/464 (17%) Query: 244 TPGKIDPIPHPY---GEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV 300 +P I Y L CA N+ + + + P ++ + + Sbjct: 3 SPSSSTTIDRGYNVLYITLGCAKNEVDTDRMRALLLASGFGEVADPESADVAIINTCSFL 62 Query: 301 KGDKVLYAHASRILHHETNPGCAR-------ALMQKHGDRYVWINPPAIPLSTEE-MDSV 352 + + + G + + ++G P + D + Sbjct: 63 ASATEESIETTLEIAEGASEGVRKLPIIMCGCVPSRYGAELNEQLPEVAAFVPADQEDGI 122 Query: 353 FALPYKRVPHPAYGNARIPAYEMIR------FSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 ++ + P + + A+ M+R V I GC C+FC+I G SR Sbjct: 123 VSIVADVLNIPEPTQSIVAAHGMLRTIDGASAFVKISEGCDRFCAFCAIPYIRG-HYHSR 181 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 + I+ E++ + D +I G ++ QT Sbjct: 182 PAEEILQEVKELMDGGVREVILI----GQDTGIWGSDMPDTEDGQT-------------- 223 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELA-----THHVGGYLK 521 L ++ ++ K I + ++ EL T V Y+ Sbjct: 224 -----PTLAKLMQKVAEVVRSYKGWIRV-----LYLQPEGMTDELISTIRDTPEVLPYID 273 Query: 522 IAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVN 581 I +H E L +M + G S ++LFD + L + PG DE+ Sbjct: 274 IPIQHCNERILKRMGRSG--SIQELRKLFDRLRSEI-PGMVLRTTGMCGFPGETDEESDE 330 Query: 582 LALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHK 641 L ++++ F V + P M VP K R + Sbjct: 331 LYDFIQEQEFDYTSVFTYSPEEGTLGAKM----------------SDQVPDEVKIERTQR 374 Query: 642 ALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMR 685 L + + L +G R + ++ + Sbjct: 375 LL----------DLVEQLGFAATARHVGERCEVIIDGIEESDEG 408 >UniRef50_C6WZM1 tRNA-i(6)A37 methylthiotransferase n=2 Tax=Flavobacteriales RepID=C6WZM1_FLAB3 Length = 508 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 45/321 (14%), Positives = 101/321 (31%), Gaps = 44/321 (13%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + V I RGC C+FC + GR +SR SI+ E + + + L G Sbjct: 192 VTAFVTITRGCDNMCTFCVVPFTRGRE-RSRDPHSIVEECKTLWENGYKEI----TLLGQ 246 Query: 436 TANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASG 495 + Y+ + + + + L +I ++ Sbjct: 247 NVDSYLWYGGGAKKD---------FKNASEMQQLTAIRFAQLLEMVAVAVPEMRIRFSTS 297 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 +D+ V+ + + ++ Y+ + + + L KM + + + L + +K Sbjct: 298 NPHDMTVDVFEVMAK--HDNICKYVHLPVQSGSDRILEKMNR--QHTRAEYLNLINR-AK 352 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + E I G +ED +++ + + + P + Sbjct: 353 EIVPEISFSQDMIIGFCGETEEDHQLTLSLMREVEYDYGYMFAYSERPGTPAH------- 405 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 + + VP KQRRL + + ++ L + G + L Sbjct: 406 --------RKMEDDVPADVKQRRLAEVIA----------LQGELSRKRMQGYAGRMHEVL 447 Query: 676 VPAPTIEEMREARRQNRNTRP 696 + + + + + +N Sbjct: 448 IEGTSKKNQNQWKGRNSQNAV 468 >UniRef50_Q17YC7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=51 Tax=Epsilonproteobacteria RepID=MIAB_HELAH Length = 439 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 47/291 (16%), Positives = 87/291 (29%), Gaps = 43/291 (14%) Query: 362 HPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 +Y +R +NI GC C++C + G+ I S D I+ E E + + Sbjct: 125 ESSYAFEFFEKKAEVRSLLNISIGCDKKCTYCIVPHTRGKEI-SIPMDLILKEAEKLANN 183 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 L G N Y +R S A +L + Sbjct: 184 GTKELM----LLGQNVNNYGVRFSSEHA---------------------KVNFSDLLDKL 218 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKPGM 540 ++ GI++I S + + +++ A V + + + L M + Sbjct: 219 SEIPGIERIRFTSPHPLHM---NDEFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYN 275 Query: 541 GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + F + K E + I P D+D + L+K F + Sbjct: 276 KEW--FLNRVEKL-KALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVCFDTLYSFIYS 332 Query: 601 PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPAN 651 P P + +V + ++ + HK +L Sbjct: 333 PRPFTEAGAW----------KERVPLEVSSLRLERLQNRHKEILEEKARLE 373 >UniRef50_C7GZA6 RNA modification enzyme, MiaB family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZA6_9FIRM Length = 451 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 46/311 (14%), Positives = 97/311 (31%), Gaps = 40/311 (12%) Query: 365 YGNARIPAYEMIR---FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 + A+E + +++ I GC C+FC I G +SR I+ E E + Sbjct: 133 FPEPGSRAFENVNNNSYTIKISEGCNNKCAFCIIPSIRGS-FRSRYIQDIVKEAEFLVTL 191 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 +I G + N + L R Sbjct: 192 GAKEIILI----GQDVTAFGTD------------------------RRNEDTLALLLREV 223 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG 541 ++G I + YD + D + + V Y+ + +H + LS M + Sbjct: 224 SKIEGEFWIRLMYC--YDNKITDELIAEIMRNKKVCKYIDMPIQHISDNVLSAMRRGSDS 281 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 E + ++ I+ PG +ED L ++K+ F V ++ Sbjct: 282 DL--IIERIRALRSNI-DDIHIRTTLITGFPGESEEDFNKLYEFVKEQEFDRLGVFSYSE 338 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA 661 + + P + + + + + + +K ++ + + ++ Sbjct: 339 EEGTAAAK---CKQIPDEIREQRRDSIMRLQSEISKNKNKMMVGKTMKVLIDGVIEGEQS 395 Query: 662 MGKKHLIGSRR 672 ++ LIG Sbjct: 396 GSERMLIGRTE 406 >UniRef50_Q2SXQ0 Radical SAM domain protein n=83 Tax=Bacteria RepID=Q2SXQ0_BURTA Length = 503 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 74/476 (15%), Positives = 134/476 (28%), Gaps = 89/476 (18%) Query: 209 AMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVA 268 A P S + D + V+E L D + T P + EDL + Sbjct: 71 AALVPGSRVLDAPADGLSVEETLKIAKDYDLVIIHTSTPSFPTDAMFAEDLKKMKPSMLV 130 Query: 269 PKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGD---KVLYAHASRILHHETNPGCARA 325 AV +V F+ D +A + + + Sbjct: 131 GMVGAKVAVDPHNSLTATQAIDFVCREEFDYTCKDIAEGKPFAEILGMSYRAKD-----G 185 Query: 326 LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNA------RIPAYEMIRFS 379 ++ +G R + N MD LP+ P Y I S Sbjct: 186 SIEHNGPRPMIEN----------MD---ELPFVA---PVYKRDLKIDNYFIGYLNYPYVS 229 Query: 380 VNIMRGCFGGCSFCSITEHEGRI-IQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 + RGC C+FC + G + RS +S++ E++ IRD +P ++ D Sbjct: 230 IYTGRGCRSKCTFCLWPQTVGGHRYRVRSVESVLAEVKWIRDNMPEVKEIMFD------- 282 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 + R L G+ A Sbjct: 283 -------------------------DDTFTDFKPRVEEIARGLGKL-GVTWSCNA----- 311 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAG 558 P ++ + L + E ++ L + K F+ K+ G Sbjct: 312 --KANVPYSTLKIMKENGLRLLLVGYESGDDQILLNIKKG---LRTDIARRFNEDCKKLG 366 Query: 559 KEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM-----YYT 613 + + FI PG E + + K+ QV P P + Sbjct: 367 IK--IHGTFILGLPGETKETIKKTIEYAKEINPHTIQVSLAAPYPGTRLYNQAIENGWME 424 Query: 614 GKNPLAKIGYKSEDV------FVPKGDKQRRLHKALLRYHDPAN--WPLIRQALEA 661 + + + + +PK + +L ++ + W ++R+ L + Sbjct: 425 ENKTINLVSKEGVQLAAIGYPHLPKEEIYHQLEHFYREFYFRPSKIWEILREMLTS 480 >UniRef50_UPI0001C31EA2 RNA modification enzyme, MiaB family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31EA2 Length = 443 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 47/334 (14%), Positives = 95/334 (28%), Gaps = 56/334 (16%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + I GC CS+C + GR + R ++ ++E + L Sbjct: 139 REFQGWTQISVGCNMACSYCIVPSTRGRDV-GRPLGVLVADVERMASEGVTEV----TLL 193 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y +P +L + GI++I Sbjct: 194 GQNVNAYGRDLHRRG-----------FPSAT---------FADLLSAVDAIDGIRRIRYT 233 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 S D+ + R EL + ++ + + L M + S +R+ + Sbjct: 234 SPHPQDMKEDVIRAHAEL--EALCEHVHLPLQSGSSRVLKAMRR--TYSRERYLDRVA-L 288 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 ++ + + I PG DED ++ + + P + T+ Sbjct: 289 LREHVPDVAITTDIIVGFPGETDEDFAQTLSLCEEVAYDGAFTFVYSPRRETEAATL--- 345 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 VP K R+ + + + Q + +G + Sbjct: 346 -------------PDQVPHEVKVERMDRLV----------EVIQRRAKERAQRFVGRTVE 382 Query: 674 CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQ 707 LV P+ + R ++R+ + Sbjct: 383 VLVEGPSRTDPTRLRGRSRHNKVVNFSGLAQPGD 416 >UniRef50_C2KPF3 Possible tRNA 2-methylthioadenine synthetase n=2 Tax=Mobiluncus mulieris RepID=C2KPF3_9ACTO Length = 552 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 56/361 (15%), Positives = 98/361 (27%), Gaps = 64/361 (17%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 V+I GC C+FC + GR + R + I+ E++A+ L G Sbjct: 182 AWVSISVGCNNTCTFCIVPSLRGRE-RDREPEEILRELQAVVAQGAVEV----TLLGQNV 236 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 N Y L R A G++++ AS Sbjct: 237 NSYGNGFGR------------------------RGAFAQLLREAGRTPGLERLRFASPHP 272 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 + + E T V L + + L +M + +RF + + A Sbjct: 273 AAFTEDVIAAMAE--TPTVMPSLHFPLQSGSDRVLRQMRRSYR--VERFLRILGEV-RDA 327 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 E + I PG D D +++ RF + P + Sbjct: 328 IPEAAITTDVIVGFPGETDADFEATLRVMEQARFSAAFTFIYSRRPGTPAAD-------- 379 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 + VP R + L +++ + + L G + LV Sbjct: 380 --------REDQVPSEVVSERYQRLLA----------LQERISTEENERLEGQTVEVLVG 421 Query: 678 APTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPV----NAGAKKRP 733 ++ R R L + Q+ S+ G P Sbjct: 422 EQGTKDRETGRMSGRARDNRLVHFALPPSLSQSDLQKGNGSAITHSGGKLMHPGGEPPMP 481 Query: 734 K 734 + Sbjct: 482 R 482 >UniRef50_B1H0D2 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=MIAB_UNCTG Length = 418 Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 108/326 (33%), Gaps = 63/326 (19%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I + IMRGC CS+C++ GR + S + ++I+NE ++ L G Sbjct: 132 KIVRYITIMRGCDNYCSYCAVPFVRGREV-SINCETIVNECSSMVKNGAREII----LLG 186 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y +L ++ ++ +++I + Sbjct: 187 QNVNSYQY---------------------------EDVNFASLIKKTAAIENLERIRFMT 219 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 D++ + + + V ++ I + + L M + SY+ + L Sbjct: 220 NHPKDLSDDLIKIMA--TEPKVCPHIHIPMQSASDKILKAMNR--KYSYEHYLGLIKKL- 274 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 + A + + I PG DED + +K RF V + P P + M Sbjct: 275 RTAVPDVSVTTDIIVGFPGETDEDFEDTLKAVKTIRFGGLYVFRYSPRPDTKAAEMI--- 331 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 VP +K+RR H +L+ + + ++ + L GS + Sbjct: 332 -------------DDVPFEEKKRR-HAVVLKESNKISIEIVSEML---------GSTQQV 368 Query: 675 LVPAPTIEEMREARRQNRNTRPALTK 700 L ++ + R K Sbjct: 369 LAEEIKNGIIKARTKNGRKVFAEGRK 394 >UniRef50_A5GQP4 Ribosomal protein S12 methylthiotransferase rimO n=56 Tax=cellular organisms RepID=RIMO_SYNR3 Length = 487 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 56/328 (17%), Positives = 97/328 (29%), Gaps = 63/328 (19%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 + + GC C+FC I + G +SR +SI+ E + + +IS + T Sbjct: 179 AYLKVAEGCDYRCAFCIIPKLRGDQ-RSRPIESIVAEAQQLAAQGVKELILISQI---TT 234 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 N Y L L R +++ I I + Sbjct: 235 N-YGLDLY------------------------GKPQLAELLRALGEVE-IPWIRVHYAYP 268 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG-SYDRFKELFDTYSKQ 556 + E +E+ +V YL + +H+ L M +P + + Sbjct: 269 TGLTPEVLAAYREV--PNVLPYLDLPLQHSHPEVLRAMNRPWQEGVNGQLLQRIREQLPD 326 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 A L FI +PG +E +L ++++ RF V F P + + Sbjct: 327 A----VLRTTFIVGYPGETEEQFEHLLEFVQEQRFDHVGVFCFSPEDGTPAADL------ 376 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV 676 VP + R + + +QA+ A +G D LV Sbjct: 377 ----------PNAVPAEVAEARRGRLM----------EAQQAISAERNGAWVGRIVDVLV 416 Query: 677 PAPTIEEMREARRQNRNTRPALTKHTPM 704 R R + Sbjct: 417 EQENPSSGELIGRCLRFAPDVDGEVRIR 444 >UniRef50_C1TRT8 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRT8_9BACT Length = 416 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 45/341 (13%), Positives = 100/341 (29%), Gaps = 61/341 (17%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 + + GC CSFC+I G ++SR I+ E + + ++ G Sbjct: 118 YLKVGEGCDTRCSFCTIPSIRG-PLRSREPKDIVAEAVKLAEEGAKELCLV----GQDLT 172 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA-RDLKGIKKILIASGVR 497 +Y L +L + + Sbjct: 173 VYGSDLSK------------------------RGSLSGLLDAMEAELPEDIWLRLFYLHP 208 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 + + L + + +L I +H + L +M +P + + ++LF ++ Sbjct: 209 SRVDEASLERV--LNSSRILPWLDIPIQHVDADVLRRMNRPPVE--EHIRKLF-KAGRRM 263 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 + + PG ++ +L +++ F F P + M Sbjct: 264 FPDFAFRTTIMVGFPGETEKAFQSLLDFVEDVAFDRLGAFTFCPEEGTPAALM------- 316 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 +P+ +K RR + + ++Q + ++ +G D L+ Sbjct: 317 ---------PDQIPQDEKDRRYAELM----------ELQQGISLARQRGFVGKEMDVLIE 357 Query: 678 APTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKAS 718 E+ R R+ + + P + S Sbjct: 358 EVDEEDGTRWGRSFRDAPEIDGLVSISGAKDDVPGDMVRVS 398 >UniRef50_C7NCD8 RNA modification enzyme, MiaB family n=11 Tax=Fusobacteriaceae RepID=C7NCD8_LEPBD Length = 441 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 52/337 (15%), Positives = 95/337 (28%), Gaps = 59/337 (17%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + I S++I GC C+FC + G +S + II ++E Sbjct: 145 DDIVASISITYGCNNYCTFCIVPYVRGME-RSVPLNEIIRDVEQYTKKGYKEILF----L 199 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y + L ++ +++G I Sbjct: 200 GQNVNSYGSD-----------------------FANGQDNFAELLEQSANVEGDFWIKYV 236 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 S D + E I + L + + L M + + F L Sbjct: 237 SPHPKDFSDEVIDVIAR--NPKIARMLHLPLQSGSTKILDSMNRGYTK--EEFIALAKKI 292 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 ++ + L I PG DED + + + F + + + TM Sbjct: 293 KEKI-PDIGLTTDIIVGFPGETDEDFQDTMDVVNEVGFENAFMFMYSKRTGTPAATM--- 348 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 + V + K RL + L+R + ++ L G Sbjct: 349 -------------EEQVDEQTKNERLQQ-LMRLQNMKAKEESQKYL---------GQTVK 385 Query: 674 CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQT 710 LV P+ + ++ + L K + Q Sbjct: 386 VLVEGPSRKNPEMLTGRSSTHKIILFKSDRKDLKGQF 422 >UniRef50_A6TR80 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=18 Tax=Clostridia RepID=MIAB_ALKMQ Length = 476 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 89/309 (28%), Gaps = 42/309 (13%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 + ++ +NIM GC C++C + GR +SR II+E+E + Sbjct: 174 EGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRE-RSREVQEIIDEVEELAKNGTKE 232 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 L G N Y + NL + ++ Sbjct: 233 I----TLLGQNVNSYGKTLEEE------------------------TDFGNLLKVLNKIE 264 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYD 544 GI++I + D++ + V +L + + L M K +Y Sbjct: 265 GIERIRFMTSHPKDLSDSLISAMT--VCTKVCAHLHLPFQAGSNDILKAMNRKYTKEAYL 322 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 E + L I PG ++D ++K RF + Sbjct: 323 ELVEKVRSKVPNVA----LTTDIIVGFPGETEDDFKETLNVVEKARFNSAYTYLYSLRQE 378 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 + M + K + + + R+ + + + ++ + Sbjct: 379 TPAAKMENHVPD-DVKHERFNRLI-----EAVNRISGEINKAYLNKVVEVLVEGTSKTDD 432 Query: 665 KHLIGSRRD 673 L+G Sbjct: 433 AKLMGRTPQ 441 >UniRef50_B2S3Z3 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=4 Tax=Treponema RepID=MIAB_TREPS Length = 456 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 102/340 (30%), Gaps = 68/340 (20%) Query: 353 FALPYKRVPHPAYGNARIPAYEMIRFS---------VNIMRGCFGGCSFCSITEHEGRII 403 + + Y + Y S + IM GC CSFC + GR I Sbjct: 123 YRFEFISE---RYREHPVSGYRFFASSYSEGSFQSFIPIMNGCNNFCSFCIVPYVRGREI 179 Query: 404 QSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 SR D+I+ E++ + + L G N Y R + +P + Sbjct: 180 -SRDLDAILQEVDVLSEKGVREI----TLLGQNVNSYRGRDREGNIVT--------FPQL 226 Query: 464 CPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYL-KI 522 H L RR IK I S D+ I +A L + Sbjct: 227 LRH----------LVRRCEVKDQIKWIRFVSSHPKDL---SDDLIATIAQESRLCRLVHL 273 Query: 523 APEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNL 582 +H G L +M + + +++ L K + L + PG +ED Sbjct: 274 PVQHGANGVLKRMRRS--YTREQYLSLVGKL-KASVPNVALSTDILIGFPGETEEDFEQT 330 Query: 583 ALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKA 642 +++ F S MY+ NP +P + RL + Sbjct: 331 LDLMREVEFD--------------SAFMYH--YNPREGTPAYDFPDRIPDATRIARLQRV 374 Query: 643 L----------LRYHDPANWPLIRQALEAMGKKHLIGSRR 672 + +R P++ ++ + L G Sbjct: 375 IALQMSTTLKKMRARVGKTLPVLVESRSRNNPEELFGHTE 414 >UniRef50_Q3AF04 MiaB-like tRNA modifying enzyme n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AF04_CARHZ Length = 434 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 46/264 (17%), Positives = 85/264 (32%), Gaps = 54/264 (20%) Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPT 436 R V I GC C++C I G ++SR + ++ E++ + + GF+ ++ L G Sbjct: 144 RAFVKIQEGCNSYCAYCIIPYARG-PLRSRPLEDVVAEVKKLCQS--GFSEIV--LTGIH 198 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 Y + +L + +K++ ++S Sbjct: 199 TGAYGQE------------------------KQDLPKLADLVAELFKIPELKRLRLSSIE 234 Query: 497 RYDIAVEDPRYIKELA-THHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELFDTYS 554 D V + LA + +L + + ++ L M + Y R E Sbjct: 235 PQDFTV---ELLDVLANSPKFCRHLHLPLQSGDDDILKAMRRKYTSYEYLRLIETIRERI 291 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 L I PG +E +N +KK F V + P + M Sbjct: 292 PDIA----LTSDVIVGFPGETEEQFLNTYNLVKKVGFMDIHVFKYSPRAGTPAAKM---- 343 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRR 638 +P+ +K+RR Sbjct: 344 ------------PGQIPEREKERR 355 >UniRef50_D2L881 RNA modification enzyme, MiaB family n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L881_9DELT Length = 446 Score = 168 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 48/340 (14%), Positives = 88/340 (25%), Gaps = 61/340 (17%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 R V+IM+GC C++C + GR +SR +++ E + + L G Sbjct: 144 PPRAFVSIMQGCDNYCAYCIVPFVRGRQ-KSRGAAAVVEECRNLAERGVREV----TLLG 198 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y L + L + GI +I + Sbjct: 199 QNVNSYGLDASG-----------------------DGTSFARLLDAVAAVPGIARIRFTT 235 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTY 553 D++ + L + L + + + L +M + Y R Sbjct: 236 SHPKDLSDDVIERFGSL--PQLCPALHLPVQSGSDRILRRMGRRYDTADYRRLVAKLRRA 293 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 L I PG + D +++ RF + P S Sbjct: 294 RPDLA----LTTDLIVGFPGETEADFKETLDLVREVRFESGFSFMYGDRPGTAS------ 343 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 + E P+ R A + A +G+ + Sbjct: 344 ---------ERLEPKIAPEAKAARL-----------AELQTLLDAGLTASLAARVGTSAE 383 Query: 674 CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPAT 713 L+ P+ + + P+ T Sbjct: 384 ILIEGPSRRDGAAGPSWRGRDPWGRIVNLPLPGHGDAAGT 423 >UniRef50_Q6MAB7 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Parachlamydiaceae RepID=MIAB_PARUW Length = 450 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 112/329 (34%), Gaps = 59/329 (17%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + I+ V+I+RGC C++C + G + SR+ ++I+ E + + L Sbjct: 156 DQIKAYVSIIRGCDKFCTYCVVPYTRGSEV-SRAPENILEECRHLVNQGYKEI----TLL 210 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G N Y C+ +L + + G++++ Sbjct: 211 GQNVNSYGKD---------KLEWKCL--------------FHDLLYQLDKIPGLERVRFM 247 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 + DI+ E I++L + ++ + L KM + + + +++ E Sbjct: 248 TSHPVDISKELMEAIRDL--KTLCEFVHFPLQAGSNRVLKKMHR--IYTVEQYLEKV-QM 302 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 K+ L I P +E+ LK+ + + + ++ P + M + Sbjct: 303 LKEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPA--MRWR 360 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 VP+ KQ RL + L ++ + ++ +G + Sbjct: 361 D--------------DVPEEVKQDRLQRLL----------QLQDTIYMKHRQAFLGQTVE 396 Query: 674 CLVPAPTIEEMREARRQNRNTRPALTKHT 702 LV ++ R + + R + L Sbjct: 397 VLVERRNFKDDRLVKGRTRCWKNVLFTGG 425 >UniRef50_Q7ULM9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Planctomycetaceae RepID=MIAB_RHOBA Length = 479 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 106/326 (32%), Gaps = 60/326 (18%) Query: 362 HPAYGNARIPAYEM--IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIR 419 H + R P + + I GC C++C + G Q RS + I++E + Sbjct: 146 HETFDPLRDPTMRPTPFQAYLRIQIGCDKFCTYCVVPNTRGPE-QGRSPEEIVSEARVLA 204 Query: 420 DTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYR 479 + I+ L G T N Y R L Sbjct: 205 EQGA---LEIT-LLGQTVNSYRHRGPD-----------------------GETDMAGLLE 237 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 R D+ G+K+I + D+ I++L V YL + + + L +M + Sbjct: 238 RLHDIDGLKRIKFVTNYPKDMTARLLETIRDL--PKVSPYLHVPAQSGSDAVLKRMKRG- 294 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + + E+F+ + E + FI G DED +++ RF+ + + Sbjct: 295 -YTIADYMEMFERI-ETVLPEASVSSDFIVGFCGETDEDFQKSVKLIERCRFKNSFIFQY 352 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQAL 659 + + VP+ K R ++ L ++ + Sbjct: 353 SVREGTKAAA---------------NLIDDVPREVKAARNNELLA----------VQDRI 387 Query: 660 EAMGKKHLIGSRRDCLVPAPTIEEMR 685 + LIG + LV P+ + + Sbjct: 388 SKEDNQKLIGDTVEVLVEGPSKKADK 413 >UniRef50_D1VSA4 Putative uncharacterized protein n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSA4_9FIRM Length = 437 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 89/313 (28%), Gaps = 48/313 (15%) Query: 365 YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 Y I V I GC CS+C I + G+ +SR + I E+ + Sbjct: 132 YLEGIKKEKVNITEYVKISEGCNNNCSYCIIPKLRGKN-RSRRIEDIYEEVSYLAKNGAR 190 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 +I Y + + L + + Sbjct: 191 EIILI----AQNTTDYGIDLYGRYS------------------------LSKLIKEISKI 222 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATHHVGG-----YLKIAPEHTEEGPLSKMMKPG 539 IK I + + + + EL + Y+ I +H + L M + Sbjct: 223 NDIKWIRV-------LYLYPDHFTDELINEFINNDKLVKYVDIPLQHYSDHVLKLMDRHT 275 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + K L + K G + FI PG +ED L ++ ++F V + Sbjct: 276 DK--EHIKNLIEKLRKIKGL--VIRTTFIVGFPGESEEDFNILREFINTYKFDKLGVFTY 331 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKS---EDVFVPKGDKQRRLHKALLRYHDPANWPLIR 656 + + + + + + + + + ++ + L + + Sbjct: 332 SREESTKANNLNEQIDEDVKEYRRDIIMQDQLKISERLLEDKIGQVLQVLIEEKIEDNLF 391 Query: 657 QALEAMGKKHLIG 669 + + G Sbjct: 392 AGRSYIDSPDIDG 404 >UniRef50_B5W2N4 RNA modification enzyme, MiaB family n=5 Tax=Cyanobacteria RepID=B5W2N4_SPIMA Length = 436 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 67/413 (16%), Positives = 118/413 (28%), Gaps = 63/413 (15%) Query: 322 CARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEM---IRF 378 AL+++ + + + P + ++ VF P I I Sbjct: 74 EGEALLRRVPELDLVMGPQHANRLQDLLEQVFEGSQVVATEPINIVEDITKPRRDSNITA 133 Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 VN++ GC C++C + G QSR+ ++I E+E + L G + Sbjct: 134 WVNVIYGCNERCTYCVVPNVRGTE-QSRTPEAIRAEMEELARAGYKEV----TLLGQNID 188 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y P P H +L D+ GI++I A+ Sbjct: 189 AYGRDL----------------PGSTPDGRHQHT-LTDLLYYVHDIPGIERIRFATSHPR 231 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM-GSYDRFKELFDTYSKQA 557 R EL V + I + + L M + Y R Y A Sbjct: 232 YFTERLIRACAEL--PKVCEHFHIPFQSGDNDVLKAMARGYTHEKYRRIINTIREYIPDA 289 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 + I PG + N + F L + P P + Sbjct: 290 ----SISADAIVGFPGETEAQFENTLKLVDDIGFDLLNTAAYSPRPGTGAALW------- 338 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK-KHLIGSRRDCLV 676 + + + K RL + N + +A+E + + I + LV Sbjct: 339 ---------ENQLSEEVKADRLQRL--------NRLVNVKAMERSQRYRDRI---EEVLV 378 Query: 677 PAPTIEEMREARRQNRNTRPALTKH---TPMATQRQTPATAKKASSTQSRPVN 726 ++ + + R R K + +A S P+ Sbjct: 379 EGTNPKDPSQVMGRTRGNRLTFFKGNLAELSGELVKVKIIEVRAFSLTGEPIE 431 >UniRef50_D2V442 Predicted protein (Fragment) n=1 Tax=Naegleria gruberi RepID=D2V442_NAEGR Length = 471 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 54/325 (16%), Positives = 102/325 (31%), Gaps = 41/325 (12%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 V+IMRGC CS+C + GR +SR SI+NEI + L G Sbjct: 182 AFVSIMRGCDNMCSYCIVPFTRGRE-RSRDITSILNEIRQLSKNGIKEV----TLLGQNV 236 Query: 438 NMYM----LRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 N Y + + + L + +I Sbjct: 237 NSYRDTSDSIYQEKYKNEGKEIETTDGFKTIYKPKIGGLTFTELLYEVSQIDKEMRIRYT 296 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 S D I+E T ++ + + + L +M + + + + L D Sbjct: 297 SPHPKDYPDSLIELIRE--TPNICNQIHLPAQSGSTNMLDRMRRG--YTAESYIALVDRI 352 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + L FI+ ++D + L ++ + + ++ Y Sbjct: 353 KNRI-PNVALSSDFIAGFCSETEQDHQDTLKLLNHVKYDQAYLFAYSLREKTHAHRNY-- 409 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 + VP K RRL++ + Y R+ L A+ + +G+ + Sbjct: 410 -------------EDDVPADVKNRRLNELVQTY---------RENL-AIQYEKEVGTLQC 446 Query: 674 CLVPAPTIEEM--REARRQNRNTRP 696 L+ + + + R + N R Sbjct: 447 VLIDSDSKRDPQNYWVGRTDNNKRV 471 >UniRef50_B2RKG6 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=6 Tax=Bacteroidales RepID=MIAB_PORG3 Length = 465 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 41/315 (13%), Positives = 92/315 (29%), Gaps = 40/315 (12%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I V+IMRGC CS+C + GR +SR +SI+NE+ ++ F V L G Sbjct: 163 HINGFVSIMRGCNNFCSYCIVPYTRGRE-RSREIESILNEVRDLKAK--NFREV--TLLG 217 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 N Y +L + +I S Sbjct: 218 QNVNSYRYEQNGRII-----------------------RFPDLLAAVAEAVPDMRIRFTS 254 Query: 495 GVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 D+ D I +A + ++ ++ + + + L M + + + + Sbjct: 255 PHPKDM---DDEAIAVMARYRNICNHIHLPAQSGSDKMLRVMKRGYTRRW--YLDRVAAI 309 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + + + +ED +++ + + + P + Sbjct: 310 RRAI-PDCAISSDLFCGFHSETEEDFEATLSLMEEVGYDSAFMFKYSERPGTYAARHLVD 368 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 K+ + + + + + + ++ + ++ L G + Sbjct: 369 DVLEEVKLARLDRMIALQNRLSEESNKRDI-----SKTFEVLIEGFSKRSREQLFGRTQQ 423 Query: 674 CLVPAPTIEEMREAR 688 V R + Sbjct: 424 NKVVIFDKNGHRVGQ 438 >UniRef50_Q72DE5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=14 Tax=Desulfovibrionales RepID=MIAB_DESVH Length = 449 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 74/479 (15%), Positives = 137/479 (28%), Gaps = 63/479 (13%) Query: 257 EDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHH 316 E C N + A P P + ++ + K ++ +Y+ RI Sbjct: 9 ETFGCQMNVNDSDWLARALMERGFSPAPFGEARLTIVNTCSVRDKPEQKVYSLLGRIRQA 68 Query: 317 ETNPGCAR-----ALMQKHGDRY--------VWINPPAIPLSTEEMDSVFALPYKR---- 359 + A + Q+ G + + + ++ + +D + P + Sbjct: 69 TSKKPDAFVAVGGCVAQQIGSGFFSRFPQVRLVFGTDGLAMAPQALDRLVEEPDLKLSLL 128 Query: 360 ---VPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE 416 +P VNIM+GC C++C + GR +SR+ +I++E Sbjct: 129 DFSEDYPERDAVLGQGAVPASVFVNIMQGCDNFCAYCIVPYTRGRQ-KSRATGTILDECR 187 Query: 417 AIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTIN 476 A+ D L G N + + Sbjct: 188 ALLDRGAREI----TLLGQNVNSFGQDSHG-----------------------DGTTFAQ 220 Query: 477 LYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM- 535 L + L G++++ + DIA E L ++ L + + + L M Sbjct: 221 LLHKVAALPGLERLRFVTPHPKDIAPEVVEAFGTL--PNLCPRLHLPLQAGSDRILKLMG 278 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 + M Y R + L I PG +ED + L+ + Sbjct: 279 RRYDMARYLRIVDDLRAARPDI----VLSSDIIVGFPGETEEDFMETMDALETVGYAASY 334 Query: 596 VQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLI 655 + P + M + K+ + +R L + R L+ Sbjct: 335 SFCYSDRPGTRA-EMLPDKLSREVKLERLERLQTLQNRLTERCLQDMVGR----KVEVLL 389 Query: 656 RQALEAMGKKHLIGSRRD---CLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTP 711 G + RD LV + R KH+ +A Q P Sbjct: 390 EGMSRKPGDEGDSWQGRDPYGNLVNVALPQGSDVRGRFLPVVVAQAKKHSLLAEQAGAP 448 >UniRef50_D1H8D6 Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H8D6_VITVI Length = 663 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 98/347 (28%), Gaps = 66/347 (19%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + V+IMRGC CSFC + GR +SR +SI+ E+ + L G Sbjct: 338 SVTAFVSIMRGCNNMCSFCIVPFTRGRE-RSRPVESIVREVAELWKEGVKEVM----LLG 392 Query: 435 PTANMY--MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILI 492 N Y +LS +P+ + Sbjct: 393 QNVNSYNDASGFDKEVEPGANWKLSEEFPE-------------------------MRFRY 427 Query: 493 ASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFD 551 S D E +++ ++V + + + L +M + +Y + Sbjct: 428 TSPHPKDFPDELLYLMRD--RYNVCKSIHLPAQTGSSTVLERMRRGYTREAYLDLVQKIR 485 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 G + FI G +E+ + +K + + + + ++ Y Sbjct: 486 RIVPDVG----ITSDFICGFCGETEEEYADTISLVKAVGYDMAYMFAYSMREKTHAHRNY 541 Query: 612 YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 VP KQRRL + + + R++ IG+ Sbjct: 542 VDD---------------VPDNIKQRRLAEMI---------EVFRES-TGQCYDSQIGTV 576 Query: 672 RDCLVPAPTIEE--MREARRQNRNTRPALTKHTPMATQRQTPATAKK 716 + LV P + +R R + Sbjct: 577 QLVLVEGPNKRAPDTELIGKTDRGHRVSFKNTPVPHWDDDVGGNQNP 623 >UniRef50_D2QJ28 RNA modification enzyme, MiaB family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJ28_9SPHI Length = 513 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 53/345 (15%), Positives = 109/345 (31%), Gaps = 47/345 (13%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + V+IMRGC CSFC + GR +SR SI+ E + + D L G Sbjct: 182 VTAFVSIMRGCDNMCSFCVVPFTRGRE-RSRDPFSIVREAQDLFDQGYREV----TLLGQ 236 Query: 436 TANMY----MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEP--------TINLYRRARD 483 + Y +R + R + D +++ +L Sbjct: 237 NVDSYKWELGVRSEELGVADRTGRPASANMDASATPNSSLLTTNTNTTTTFAHLLEMVAQ 296 Query: 484 LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSY 543 + ++ ++ DI + + ++ Y+ + + L M + + Sbjct: 297 IHPDLRVRFSTSHPKDITDDVLHTMARY--DNICNYIHLPAQSGNSRVLKLMNRTYDRPW 354 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 + D + G++ + IS +E+ + + + + + P Sbjct: 355 --YIGKIDRIREILGEDCGISTDMISGFCTETEEEHQDSLSLMDYVHYDYAYMFAYSERP 412 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 + Y +P+ K+RRL++ + R + A A Sbjct: 413 GTLAAKKYADD---------------IPEDVKKRRLNEIIAR----------QLAHSAER 447 Query: 664 KKHLIGSRRDCLVPAPTIE-EMREARRQNRNTRPALTKHTPMATQ 707 + IG + L+ P+ + R ++N K Q Sbjct: 448 NQRHIGQVQRVLIEGPSKRSDDFLCGRNDQNKMVVFPKGDHQKGQ 492 >UniRef50_B2IIK5 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=191 Tax=cellular organisms RepID=MIAB_BEII9 Length = 510 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 76/548 (13%), Positives = 144/548 (26%), Gaps = 97/548 (17%) Query: 227 VKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKP 286 V E+ G+ S T + + + C N A + + A P Sbjct: 9 VPESAEKADGLLSQERGTQDPLVNTRKLFVKSYGCQMNVYDAERMADLLAPEGYAETSAP 68 Query: 287 WEKTYVLL-------PSFEKVKGD--KVLYAHASRILHHETNPGCARALMQKHGDRYVWI 337 + V+L + EKV + K+ A + + + + Sbjct: 69 EDADLVILNTCHIREHAAEKVFSELGKLRLLKAEQQAAGRPVKIVVAGCVAQAEGEEILR 128 Query: 338 NPPAIPLSTEEMDSVFALP--YKRVPH-PAYGNARIPAYEM----------------IRF 378 A+ L S LP +RV H P + PA + + Sbjct: 129 RQKAVDLVVGPQ-SYHRLPDLLRRVAHTPGLVDTEFPAEDKFDHLVAPQPEKIAERGVGA 187 Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 V + GC CSFC + G SR ++I+ E+E + + +I G N Sbjct: 188 FVTVQEGCDKFCSFCVVPYTRGAE-TSRPVEAILAEVETLIASGVREVTLI----GQNVN 242 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRY 498 Y A + +L R + G+ +I + Sbjct: 243 AYHGFDAMTGAPAS---------------------LASLMARVAAMPGLLRIRYTTSHPN 281 Query: 499 DIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTYSKQA 557 D+ + +++ +L + + + L+ M + G Y Sbjct: 282 DMGEDLIAAHRDIPALM--PFLHLPVQSGSDKILAAMNRRHKAGDYLELIASIRAARPDI 339 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 L FI PG + D +++ F + P Sbjct: 340 A----LSSDFIVGFPGETEADFEATLALIEQVGFASAFSFKYSQRPGTPGAD-------- 387 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVP 677 + + K +RL + + + K +IG L Sbjct: 388 --------RPDQIDEDVKAQRLARL----------QALLEEQRQAFNKAMIGRVLPVLFE 429 Query: 678 APTIEEMREARR-------QNRNTRPALTKHTPMATQRQTPA--TAKKASSTQSRPVNAG 728 P + A + + + P+ P + + + G Sbjct: 430 KPGRHPGQIAGKTPYLQALYAEGDKALIGTVQPVEILEAGPNSFHGRLLARETGQESAQG 489 Query: 729 AKKRPKAA 736 + Sbjct: 490 QESAQGME 497 >UniRef50_B2A1N3 RNA modification enzyme, MiaB family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1N3_NATTJ Length = 446 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 113/352 (32%), Gaps = 46/352 (13%) Query: 315 HHETNPGCARA-----LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNAR 369 + +T+P +A ++ DR + LS E + + P + N + Sbjct: 86 YPQTDPQTVKALEGVDIVHGIEDRSGLVELVEQALSKENIWQGAIHLHDSRPKGEFENLK 145 Query: 370 IP---AYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFT 426 I ++ R + I GC CS+C I G ++SR + +I+EI+ GF Sbjct: 146 IKNFKKHDRTRHFLKIQEGCDQFCSYCIIPYARG-HLRSRPPEDVISEIKQAVSN--GFK 202 Query: 427 GVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG 486 ++ L G Y ++N L + LKG Sbjct: 203 EIV--LTGINLGAYGRE------------------------NSNLPNLATLLDKIIHLKG 236 Query: 487 IKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG-MGSYDR 545 +I ++S +I + + + + +L I + + L M + Y + Sbjct: 237 DYRIRLSSCEPQEITIGLLELVTN--SEKICKHLHIPLQSGDNEILKAMNRDYSKEDYRK 294 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 S + I PG N ++KK F + + P Sbjct: 295 IVMAAREKSPSIA----ITTDIIVGFPGESANHFRNTKEFVKKIGFSDIHIFQYSPRKNT 350 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQ 657 + ++ + + +S+++ D R H+ + P + Sbjct: 351 PAQE--FSDQVHSKEKKARSQELIEISRDLSRVYHEQFIDKTVPVLVEKHEE 400 >UniRef50_D2LIN5 RNA modification enzyme, MiaB family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIN5_RHOVA Length = 469 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 62/477 (12%), Positives = 124/477 (25%), Gaps = 96/477 (20%) Query: 245 PGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLP-SFEKVKGD 303 P P + + C N + + +A P + V+L + K Sbjct: 15 PTANAPEKRVFIKTFGCQMNVYDSERMADALGAAGFVETGAPEDADLVILNTCHIREKAA 74 Query: 304 KVLYAHASRI-LHHETNPGCARA---------LMQKHGDR-------YVWINPPAIPLST 346 + +++ R+ + E + Q G+ + + P + Sbjct: 75 EKVFSELGRLRVLREARRQDGGGNLMIAVAGCVAQAEGEEIARRAAVDIIVGPQSYHRLP 134 Query: 347 EEMDS---------VFALP----YKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFC 393 E ++ P + +P P A + + GC C+FC Sbjct: 135 ELIERRASTRGPVIETEFPAAEKFASLPAPKLRAA-------PSAFLTVQEGCDKFCTFC 187 Query: 394 SITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTC 453 + G SR II E + + + L G N + S + Sbjct: 188 VVPYTRGAEY-SRPVAQIIEEAKRLAERGVREI----TLLGQNVNAWAGEGPSGKTW--- 239 Query: 454 RRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELAT 513 +L ++ GI ++ + D++ ++L Sbjct: 240 -------------------TLPDLLAALSEVNGIARLRFTTSHPNDMSDALIAAHRDLPK 280 Query: 514 HHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPG 573 YL + + + L M + + + + + A + L I PG Sbjct: 281 LM--PYLHLPFQSGSDRILKAMNR--KHRMEDYLRIVHRL-RDARPDLALSTDIIVGFPG 335 Query: 574 TRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKG 633 D D +++ F + P P + K Sbjct: 336 ETDADFEETMRMVERVHFAQAYSFKYSPRPGTPAADRAAQVPED-------------VKS 382 Query: 634 DKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQ 690 ++ RL L N ++G L + E + R Sbjct: 383 ERLARLQALLFAQQTAFN-------------AAMVGRTLSVLWESRGRNEGQVVGRS 426 >UniRef50_Q48FA7 Ribosomal protein S12 methylthiotransferase rimO n=48 Tax=cellular organisms RepID=RIMO_PSE14 Length = 447 Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 54/332 (16%), Positives = 100/332 (30%), Gaps = 38/332 (11%) Query: 369 RIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV 428 + + I GC CSFC I G+++ SR +++E + + + V Sbjct: 136 GVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLV-SRPVGDVLDEAKRLVKSGVKELLV 194 Query: 429 ISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK 488 IS + Y + K Y L + + Sbjct: 195 IS----QDTSAYGVDVK--------------YRTGFWDGQPVKTRMTELCQALGSMG--V 234 Query: 489 KILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKE 548 + + Y I +A + YL I +H L M +P D+ Sbjct: 235 WVRLHYVYPY---PHVDELIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFE--DKTLA 289 Query: 549 LFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANST 608 + +Q + + FI PG +ED L WL + + + P A + Sbjct: 290 RIKNWREQC-PDLIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPA- 347 Query: 609 TMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 + P +DV + D+ +A+ + ++ + + Sbjct: 348 NLLDAAIVP--------DDVKQDRWDRFMAHQQAISAARLQ--MKIGKEIEVLIDEVDDR 397 Query: 669 GSRRDCLVPAPTIEEMREARRQNRNTRPALTK 700 G+ C AP I+ + +T K Sbjct: 398 GAVGRCFFDAPEIDGNVFIGLEEGSTVQPGDK 429 >UniRef50_B0VHG4 tRNA-i(6)A37 modification enzyme MiaB n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VHG4_9BACT Length = 427 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 63/438 (14%), Positives = 126/438 (28%), Gaps = 65/438 (14%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAHASRI 313 Y E C N + + E +L + + ++ + Sbjct: 4 YIETYGCQMNVADSELIASILTKAGHQEVTQISEADLLLFNTCSVRGHAEERVLGRIQSE 63 Query: 314 LHHETNPGCAR-----ALMQKHGDR--------YVWINPPAIPLSTEEMDSVFALPYKRV 360 H + + + Q+ G+ I + ++ Sbjct: 64 NHRKKENPNLKIGVVGCMAQRLGEEINKEKLTVDFVIGVDQYQHLPDILNEETEKTILTD 123 Query: 361 PHPAYGNARI-PAYEMIR-FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI 418 I PAY + IMRGC CS+C + GR +SRS II E I Sbjct: 124 LDETQLYKGIQPAYHNDYCAYITIMRGCNNFCSYCIVPYVRGRE-RSRSWQDIIEE--TI 180 Query: 419 RDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLY 478 G + L G N Y L Sbjct: 181 SAGNQGKKDI--TLLGQNVNSY---------------------------LNGEVNFPRLL 211 Query: 479 RRARDLKGIKKILIASGVRYDIAVEDPRYIKELA-THHVGGYLKIAPEHTEEGPLSKMMK 537 +L I ++ + D+ I+ LA + + ++ + + + L M + Sbjct: 212 IILNELDEIYRLRFITSHPKDL---SEELIEVLANSAKICEHIHLPVQSGSDNILKAMNR 268 Query: 538 P-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 + Y E + + ++ PG + D + +K F Sbjct: 269 NYTVQHYISLVEKLHKFIPNIA----ITTDIMTGFPGETENDFQDTLSLMKTIEFDDAFC 324 Query: 597 QNFYPSPLANSTTMYYTGKNPLAKIGYKSED-VFVPKGDKQRRLHKALLRYHDPANWPLI 655 F P P + T+ + + P A+ + + + + + ++ + + R + Sbjct: 325 YKFSPRPGTTAETL--SNQVPEAERLARLQQMIDLQRKISLKKNREQIGRK-----VEVY 377 Query: 656 RQALEAMGKKHLIGSRRD 673 ++ +K ++G RD Sbjct: 378 IESFSKKSRKMVLGKTRD 395 >UniRef50_Q09316 CDK5RAP1-like protein n=5 Tax=Bilateria RepID=CK5P1_CAEEL Length = 547 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 95/316 (30%), Gaps = 39/316 (12%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 ++IMRGC C++C + GR +SR +SI+ E++ +RD L G Sbjct: 224 AFISIMRGCDNMCTYCVVPFTRGRE-RSRPIESIVEEVQRLRDQGYKQV----TLLGQNV 278 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDT--NHEPTINLYRRARDLKGIKKILIASG 495 N Y + P L + D + S Sbjct: 279 NSYRDMTSMDFSMAPSTSQEDRVPGFKTVYKPKSGGLTFTTLLEKVADAAPDIRFRFTSP 338 Query: 496 VRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS-YDRFKELFDTYS 554 D ++ I + ++ L + + ++ L +M + Y R + Sbjct: 339 HPKDFPMQLIELIA--SRPNLCKQLHLPAQSGDDETLERMERGYTRDLYLRLVDDIRHVL 396 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 L FI+ G ++ N ++ R+ V + + Sbjct: 397 PSV----SLTSDFIAGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMRGKTRAHHRLTDD 452 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 VP+ K RR H +AL+ + LIGS + Sbjct: 453 ---------------VPEDVKARR--------HLDLTTVFREEALKL--NQALIGSEQTV 487 Query: 675 LVPAPTIEEMREARRQ 690 L+ + + + + Sbjct: 488 LLEGKSKRDASFSHGR 503 >UniRef50_B8FUN0 RNA modification enzyme, MiaB family n=2 Tax=Desulfitobacterium hafniense RepID=B8FUN0_DESHD Length = 439 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 52/326 (15%), Positives = 101/326 (30%), Gaps = 62/326 (19%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 I R ++ I GC C++C I G ++SR ++ + E E + G+ Sbjct: 143 PLIEEESRTRATLKIQEGCNQFCTYCIIPYARG-PVRSRIPENAVTEAEKLVA--AGYKE 199 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 ++ L G Y L + +KG+ Sbjct: 200 IV--LTGIHTGSYGEDLGEDW------------------------DLARLVKALAQIKGL 233 Query: 488 KKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRF 546 ++ ++S + P I + + V +L I + + L++M +P + F Sbjct: 234 HRLRLSSIEPMEFT---PELIDVIINYPAVCPHLHIPLQCGSDAILTRMKRP--YTVKEF 288 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 KEL + + I PG +++ ++ F V + Sbjct: 289 KELIQRLTS-LQPGIAITTDVIVGFPGETEQNFQETLETVRSCGFSGIHVFPYSKREGTP 347 Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 + +P K+ R+ KALL + +R+ Sbjct: 348 AAKY----------------PEQIPNKIKEERV-KALLEVARESQEDYVRR--------- 381 Query: 667 LIGSRRDCLVPAPTIEEMREARRQNR 692 IG R + L+ + E + N Sbjct: 382 FIGQRVEVLIERVSPEGVAAGHTGNY 407 >UniRef50_Q3AU39 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=10 Tax=Chlorobiaceae RepID=MIAB_CHLCH Length = 449 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 65/474 (13%), Positives = 130/474 (27%), Gaps = 86/474 (18%) Query: 251 IPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHA 310 Y C N+ + + VLL + + H Sbjct: 6 PDAFYIHTFGCQMNQADSGIMTAILQNEGYVAASNEADAGIVLLNTCAVREHATERVGHL 65 Query: 311 SRILHHETNPGCARALM------QKHGDRYVWINPPAIPLSTEEMDSVFALPY------- 357 + LH R L+ ++ ++ N P + D+ +LP Sbjct: 66 LQHLHGRKKRSKGRLLVGVTGCIPQYEREVLFKNYPVVDFLAGP-DTYRSLPLLIKQVQQ 124 Query: 358 -----KRVPHPAYGNARIPAYEMIRFS-----VNIMRGCFGGCSFCSITEHEGRIIQSRS 407 E +R S V +MRGC C++C + GR +S Sbjct: 125 AGKGATEAALAFNSAETYDGIEPVRSSSMSAFVPVMRGCNNHCAYCVVPLTRGRE-RSHP 183 Query: 408 EDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHM 467 + +++NE+ + + L G N Y + Sbjct: 184 KAAVLNEVRQLAEAGYREI----TLLGQNVNSY-------------------------YD 214 Query: 468 DTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEH 526 L +I + DI ++ +A H ++ ++ + + Sbjct: 215 PLAQCNFAELLAAVSCAAPATRIRFTTSHPKDI---SEALVRTIAEHSNICNHIHLPVQS 271 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 L M + + + + E + L I+ G + D L Sbjct: 272 GSSRILRLMQRG--HTIEEYLEKIA-LIRSLIPNVTLSTDMIAGFCGETEADHQATLRLL 328 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRY 646 ++ +F + + P P + VP+ K+ RL + ++ Sbjct: 329 EEVQFDSAFMFYYSPRPRTPAAEKLTDD---------------VPEALKKARLQE-IIEC 372 Query: 647 HDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTK 700 + + L QA +GS + L A + + + R + Sbjct: 373 QNRISASLFSQA---------VGSVVEVLAEAESRRSSEQLMGRTAGNRTVVFA 417 >UniRef50_A4EC80 Putative uncharacterized protein n=3 Tax=Collinsella RepID=A4EC80_9ACTN Length = 449 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 91/317 (28%), Gaps = 61/317 (19%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 E V I GC CSFC I GR SR+ +SII+E+ + +I Sbjct: 140 EGAVAYVKISDGCNRFCSFCMIPYIRGR-YHSRNSESIISEVRDLVAGGVREIVLI---- 194 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G ++ R L R + + + Sbjct: 195 GQDTGIWGTDFADEDVADGSPR-----------------NLAQLLRAVAEAVRPHNVWVR 237 Query: 494 SGVRYDIAVEDPRYIKELA-----THHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKE 548 + ++ EL T V Y+ I +H + L M + G ++ Sbjct: 238 V-----LYLQPEGMTDELIDTIRDTPEVLPYIDIPVQHCDARILKAMRRSGSRQ--ELED 290 Query: 549 LFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANST 608 LF ++ + + P D++ +L ++ F V + + + Sbjct: 291 LFRDLRERI-PGIVIRSTAMVGFPTETDDEFRDLIDFMDTVGFDYTSVFAYSREEGSLAA 349 Query: 609 TMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLI 668 M + V + K R +A+ + ++L + Sbjct: 350 KM----------------EGQVDEEVKLERAQEAM----------DLAESLGFAATAAHV 383 Query: 669 GSRRDCLVPAPTIEEMR 685 G R +V E Sbjct: 384 GERAQVIVDGIEETEDG 400 >UniRef50_D1XWL0 MiaB-like protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XWL0_9BACT Length = 450 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 77/260 (29%), Gaps = 34/260 (13%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 + I GC C++C+I G+ +SR + I+ E+E + VI Sbjct: 156 AYIKIAEGCDRHCAYCAIPLITGKH-RSRKMEDILQEVEQLVAQGVKEFQVIE----QEL 210 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 Y + L R D+KG++ I + Sbjct: 211 TYYGVDLDGKH------------------------HITELISRMADIKGVEWIRLHYAYP 246 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 + I + +V YL IA +H + L +M + L + Sbjct: 247 NQFPFDLLDVIAQ--KPNVCKYLDIAFQHISDHMLDRMHRHVSKQ--ETINLIKEIRSRV 302 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 +L + PG DED L ++++ RF + S Y Sbjct: 303 -PSIHLRTTLLVGFPGETDEDFEELKDFVREVRFERMGAFAYSREEGTYSAEHYEDDVPE 361 Query: 618 LAKIGYKSEDVFVPKGDKQR 637 K E + + + Sbjct: 362 EVKQQRLDELMAIQQEISTE 381 >UniRef50_D2R676 RNA modification enzyme, MiaB family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R676_9PLAN Length = 475 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 64/474 (13%), Positives = 126/474 (26%), Gaps = 74/474 (15%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE--KVKGDKVLYAHA 310 Y E + C N + + +L + + +K A Sbjct: 3 RLYIETVGCQMNVLDSEMVVASLRKRGYELERDEASADVLLFNTCSVREQAENKTYSALG 62 Query: 311 SRILHHETNPGCARALM--------QKHGDRY----VWINPPAIPLSTEEMDSVFA---- 354 + NP +M Q DR + + P + + +D V A Sbjct: 63 RLRSLKKANPDKIIGVMGCMAQKDQQLVFDRAPYVDLVVGPGQLSRIPDLIDQVAAGHGK 122 Query: 355 ------------LPYKRVPHPAYGNARIPAYEM--IRFSVNIMRGCFGGCSFCSITEHEG 400 R H + R P + + I GC C++C + G Sbjct: 123 QMAVSLGRKDAANEEVRRSHETFDPLRDPTMRPTPFQAYLRIQIGCDKFCTYCIVPSTRG 182 Query: 401 RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVY 460 Q R I +E + D +I G T N Y + Sbjct: 183 PE-QGRPPQQIYDEARILADQGCKEITLI----GQTVNSYRYKSGESTT----------- 226 Query: 461 PDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYL 520 +L ++ GIK++ + D+ + +++L V YL Sbjct: 227 ------------RLSDLLVNLSEIDGIKRLKFVTNYPKDMTNDLLAAVRDL--PKVSPYL 272 Query: 521 KIAPEHTEEGPLSKMMKPG-MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDM 579 + + L++M + + Y A + FI G + D Sbjct: 273 HVPAQSGSNTVLTRMKRGYSVEDYREMMARIYEMVPDAA----VTSDFIVGFCGETEADF 328 Query: 580 VNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRL 639 + RF+ + + P + K +E + + ++ Sbjct: 329 EATKQLVSDCRFKNSFIFKYSERPGTKGAELLADDIPFDVKHRRNNELLELQNRISEQEN 388 Query: 640 HKALLRYHDPANWPLIRQAL--EAMGKKHLIGSRRDCLVPAPTIEEMREARRQN 691 K L + ++ + A+ + + G P + + Sbjct: 389 QKFLGQR-----VEVLVEGPSSRAVSRGEVEGDLVQLTGRTPCDRIVVFDGNRR 437 >UniRef50_UPI000180B378 PREDICTED: similar to CDK5 regulatory subunit associated protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180B378 Length = 618 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 72/477 (15%), Positives = 130/477 (27%), Gaps = 60/477 (12%) Query: 205 AHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTP------GKIDPIPHPYGED 258 + G ++ V + +K + P V+ Y E Sbjct: 64 TRTFSSGAKKVDLSHVPDIKDFIKSSQPRIEHVNLDEAPPYLENAVYATPPNGKTVYFEM 123 Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE--KVKGDKVLYAHASRILHH 316 C N ++L + + DK ++ ++ H Sbjct: 124 YGCQMNVNDGEYAWAILKKAGYKKTTDINTADVIMLVTCSIREKAEDK-IWNRLKQLKTH 182 Query: 317 ETNPGCA----------------RALMQKHGDRYVWINPPA-----IPLSTEEMDSVFAL 355 + N + +++K + P A L DS A+ Sbjct: 183 KQNYHTPGYPKIGILGCMAERLKKKIVEKEKAVDIVAGPDAYRDLPRLLEQATTDSTTAI 242 Query: 356 PYKRVPHPAYGNARIPAYEM--IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIIN 413 Y + ++ V+IMRGC CS+C + GR +SR SI+ Sbjct: 243 NTMLSVDETYADIMPVRFDQDSKTAFVSIMRGCDNMCSYCIVPFTRGRE-RSRPVTSILE 301 Query: 414 EIEAIRDTVPGFTGVISDLGGPTANMYM-LRCKSPRAEQTCRRLSCVYPDICPHMDTNHE 472 EI + D +L G N Y L A Sbjct: 302 EIRILSDQGIKQV----NLLGQNVNSYRDLSETQHSAVDAIAGNMSRGFKTIYKPKHGGL 357 Query: 473 PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPL 532 +L R + +I S D E + I E ++ + + + L Sbjct: 358 RFADLLDRVSQVDPEMRIRFISPHPKDFPDEVLQIISE--RENICKQIHLPAQSGSSNVL 415 Query: 533 SKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 + M + Y + T L IS G D D + + ++ Sbjct: 416 NLMRRGHTREDYLNLVDRIRTLIPNV----VLSTDIISGFCGETDSDHEDTLSLMSLVKY 471 Query: 592 RLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHD 648 + + ++ Y+ + VP+ K +RL + + Y D Sbjct: 472 EYAFLFKYSIRQKTHA---YHKMND------------DVPEEIKSQRLQEVIKVYQD 513 >UniRef50_A7HMK2 Ribosomal protein S12 methylthiotransferase rimO n=8 Tax=Thermotogaceae RepID=RIMO_FERNB Length = 431 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 69/455 (15%), Positives = 131/455 (28%), Gaps = 68/455 (14%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSF------EKVKGDKVLYA 308 Y L CA N+ + + V++ + ++ D +L Sbjct: 7 YVIVLGCAKNEADFSLFKYHLKQLGHEVVDDVEDADGVVIDTCGFIVDAKQESIDTILEF 66 Query: 309 HASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFAL------------- 355 + + + L+Q++ P +PL E+D F + Sbjct: 67 ASIKKQKPDFKVYVTGCLVQRY--------PKDLPLEIPEVDGWFGVIPPKNLAESINKT 118 Query: 356 -PYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 Y P Y ++ V I GC C+FC+I + +G + SR + I E Sbjct: 119 KKYITDPVAVYEFEGRVDSDLPYAYVKIADGCDRACTFCTIPKFKGGFV-SRKLEDIEKE 177 Query: 415 IEAIRDTVP-GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEP 473 + + + V D G ++Y + Sbjct: 178 VRYLIENGKKEIVLVAQDTTGYGVDLYG-----------------------------KQM 208 Query: 474 TINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLS 533 L +R D+ G I + + +K + V Y I +H+ + L Sbjct: 209 LPELLKRINDIDGNFWIRVMYMHPDHVT---DEILKGFSYEKVVKYFDIPIQHSSDNILK 265 Query: 534 KMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRL 593 M + S +ELFD + L I PG +D L +++ F Sbjct: 266 LMGR--TKSTKELEELFDKIRS-LYPQAVLRTSIIVGFPGETKDDFEQLIDFIRTIEFDR 322 Query: 594 DQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWP 653 + A S + + + V R + + + D Sbjct: 323 LGGFVYSDEEDAASYNLPNK-VSLKTAQKRLDTLMEVQAEISFLRNQRLVGKVIDVLFEE 381 Query: 654 LIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREAR 688 + + +G+ ++ D V R + Sbjct: 382 EVNGVI--IGRSYMDAPEVDGNVFVKGHGINRFGK 414 >UniRef50_C2KWT7 Possible 2-methylthioadenine synthetase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWT7_9FIRM Length = 423 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 70/420 (16%), Positives = 134/420 (31%), Gaps = 73/420 (17%) Query: 255 YGEDLPCADNKPVAPKKQEAK--AVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASR 312 Y E L C N+ A K +P E ++ + + K Sbjct: 4 YLESLGCDKNRVDAEKLLFELLQKYPGSSVTDEPSEAEIAIVNTCSFIGPAKEESIQCIL 63 Query: 313 --ILHHETNPGC----ARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG 366 + ET A L++++ D P E+D + ++ V + Sbjct: 64 DLAQYKETGKLEKLIVAGCLVERYKDEIRKELP--------EIDEITSVK-DYVKRLDHQ 114 Query: 367 NARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFT 426 AR+ + E + I GC CS+C I G +S ++ ++ E A+ G Sbjct: 115 MARVESGEKYSRYLKIAEGCDKYCSYCIIPRLRG-HYRSIPKELVLEEARALVSEGAGEL 173 Query: 427 GVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG 486 ++ +Y +A L ++ Sbjct: 174 ILV----AQETTLYGTDLYKKKA------------------------LAELLAELSEIPN 205 Query: 487 IKKILIASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDR 545 ++ I I +I +P I+E+ V YL + +H + L +M + + Sbjct: 206 LQWIRILYCYPEEI---EPELIREMKRNPKVCHYLDLPIQHASDRILKRMNRRTRK--EE 260 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 KE K+ + L I+ PG +ED + ++ + RF + Sbjct: 261 LKEKIALLRKEM-PDIALRTTIITGFPGETEEDFQEVLDFISEMRFDRLGAFPYSQEEGT 319 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKK 665 + M + +P+ K +RL + + + R+A E +G+K Sbjct: 320 KAAEM----------------EDQIPEKLKNQRLSQIMELQQN----IAFRKAEEQIGRK 359 >UniRef50_Q1AW39 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW39_RUBXD Length = 445 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 52/361 (14%), Positives = 103/361 (28%), Gaps = 48/361 (13%) Query: 344 LSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIR-FSVNIMRGCFGGCSFCSITEHEGRI 402 +T E+ LP +P E + V IM GC CS+C + GR+ Sbjct: 131 HNTYELAEFIGLP----TMEETYTPELPGVEGQKSAFVTIMTGCNYRCSYCVVPRVRGRM 186 Query: 403 IQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPD 462 + R ++++ E+ + + + L G T + + Sbjct: 187 V-CRPLENVLEEVRRLVRSGTNYI----TLLGQTVDAWRH-------------------- 221 Query: 463 ICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKI 522 +L + ++ + ++ R I E + L + Sbjct: 222 -------ERRRFCDLLEAVAE--EAPRVWFTTSHPSNMEDRTLRAIGE--RDTIVKKLHL 270 Query: 523 APEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNL 582 + + L M + DR++ + ++ + L I HPG +ED Sbjct: 271 PVQSGSDRMLKMMHRGYGA--DRYRRKIE-VFREHVPDGTLSTDIIVGHPGETEEDHEAT 327 Query: 583 ALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKA 642 ++ +F + F P + M P E + + + RR + Sbjct: 328 LRLIEDCQFDSAYIFKFSPRRGTEAAQMEGAVP-PGVVQRRFLEVLRAVEQNAFRRNQRK 386 Query: 643 LLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHT 702 + + + A+G+ S V R L Sbjct: 387 VGGTEEIYIRHGRSDSGRAIGETW---SGHAVHVDTEAGPGEYVRARIESAGPHVLYAGR 443 Query: 703 P 703 P Sbjct: 444 P 444 >UniRef50_C5CDI9 MiaB-like tRNA modifying enzyme n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CDI9_KOSOT Length = 425 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 39/240 (16%) Query: 373 YEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDL 432 Y R + I GC CS+C I G I S+ + + E++ + + GF ++ L Sbjct: 128 YGRTRAYIGIQDGCLNNCSYCRIRLARGNKIISKPPEVVAEELKTLVEH--GFQEIV--L 183 Query: 433 GGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILI 492 G Y I+L ++ ++G ++ + Sbjct: 184 TGINIGFYGFG--------------------------EGYSLISLLKQLVKIEGEWRLRL 217 Query: 493 ASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELF 550 +S D + I + + ++ ++ + + L M + ++ LF Sbjct: 218 SS---LDPRLVSNELITFMTDNPKIAQHVHLSLQSGSDKVLKSMNRNYTTNDVEQIVALF 274 Query: 551 DTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 + + I PG D D V ++K+ RF + F P P + M Sbjct: 275 RSRNN----RFSFTTDVIVGFPGETDTDFVETLEFVKRIRFLKVHIFRFSPRPGTKAARM 330 >UniRef50_A0M3K8 Ribosomal protein S12 methylthiotransferase rimO n=52 Tax=Bacteroidetes/Chlorobi group RepID=RIMO_GRAFK Length = 450 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 59/406 (14%), Positives = 111/406 (27%), Gaps = 78/406 (19%) Query: 307 YAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTE------EMDSVF---ALP- 356 + ++ T Q D+ + + ++D F LP Sbjct: 55 FIDNAKEQSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPG 114 Query: 357 YKRVPHPAYGNARIPAYEMI----RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSII 412 Y + I + I GC CSFC+I G +S ++++ Sbjct: 115 LLSALEADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGH-KSTPIENLV 173 Query: 413 NEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHE 472 E E + +I Y L R Sbjct: 174 TEAEKLAANGVKELILI----AQDLTYYGLDLYKKR------------------------ 205 Query: 473 PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPL 532 L ++GI+ I + ++ +K V YL I +H + L Sbjct: 206 NLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLEVMKR--EPKVCNYLDIPLQHISDDLL 263 Query: 533 SKMMKPGM-GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRF 591 M + + + F + L I +PG +E L W+K+ RF Sbjct: 264 KSMRRGTTHEKTTKLLKEFRKTVPEMAIRTTL----IVGYPGETEEHYQELKEWVKEMRF 319 Query: 592 RLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPAN 651 + ++ + + VP+ KQ R ++ ++ + Sbjct: 320 ERLGCFTYSHEENTHAYNL----------------EDDVPQEVKQERANE-IMEIQSQIS 362 Query: 652 WPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPA 697 W L + IG + ++ E R ++ Sbjct: 363 WEL---------NQQKIGEVFNVVID--RKEGNYFIGRTEYDSPDV 397 >UniRef50_Q96SZ6 CDK5 regulatory subunit-associated protein 1 n=33 Tax=Eukaryota RepID=CK5P1_HUMAN Length = 601 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 107/348 (30%), Gaps = 29/348 (8%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV------------PGF 425 V+IMRGC CS+C + GR +SR SI+ E++ + + V G Sbjct: 250 AFVSIMRGCDNMCSYCIVPFTRGRE-RSRPIASILEEVKKLSEQVFLPPRPPKVLGLQGL 308 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 V L G N + + LS + +L + + Sbjct: 309 KEV--TLLGQNVNSFRDNSEVQFNSAVPTNLSRGFTTNYKT-KQGGLRFAHLLDQVSRVD 365 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDR 545 +I S D E + I E ++ + + + L M + S + Sbjct: 366 PEMRIRFTSPHPKDFPDEVLQLIHE--RDNICKQIHLPAQSGSSRVLEAMRRG--YSREA 421 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 + EL + L FI+ G +ED V L++ ++ + + + Sbjct: 422 YVELVHHIRESI-PGVSLSSDFIAGFCGETEEDHVQTVSLLREVQYNMGFLFAYSMRQKT 480 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKK 665 + K+ E + + + + + ++ ++ + L Sbjct: 481 RAYHRLKDDVPEEVKLRRLEELITIFREEATKANQTSVGCTQL-----VLVEGLSKRSAT 535 Query: 666 HLIG---SRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQT 710 L G + P +E++ + R + QT Sbjct: 536 DLCGRNDGNLKVIFPDAEMEDVNNPGLRVRAQPGDYVLVKITSASSQT 583 >UniRef50_B2A3C0 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RIMO_NATTJ Length = 444 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 92/336 (27%), Gaps = 63/336 (18%) Query: 371 PAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV-PGFTGVI 429 P + I GC CS+C+I G +SR+ + I E + T + Sbjct: 139 PYQPGPSAYIKIAEGCHNYCSYCAIPLIRGG-YRSRTIEDIKIEANHFIEKGSKELTLIA 197 Query: 430 SDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKK 489 D +++Y L + G Sbjct: 198 QDTTNYGSDIYG-----------------------------KFSLDTLLDELATIPGDFW 228 Query: 490 ILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 I + I I + YL I +H ++ L+ M + G ++ L Sbjct: 229 IRVLYAYPTRITDSLIEVINR--HEKICSYLDIPLQHIDDDILTSMNRGGNK--EQILNL 284 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 K + L I PG DE NL ++++ F + + + Sbjct: 285 IHNLRKNI-PDITLRTSLIVGFPGETDEKYQNLISFMQEIEFDHAGIFKYSDEEDTQAYN 343 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 V + K++R +A +++ + + L+G Sbjct: 344 F----------------KDKVSEDVKEQRYQEAW----------EVQKEITRKKNEGLVG 377 Query: 670 SRRDCLVPAPTIEE-MREARRQNRNTRPALTKHTPM 704 + L+ +E + R + Sbjct: 378 TEMRVLIEEALEDEPTTKVGRTEGHAPEVDGAVIIP 413 >UniRef50_B5YF65 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Dictyoglomus RepID=RIMO_DICT6 Length = 440 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 101/324 (31%), Gaps = 37/324 (11%) Query: 364 AYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 + R+ V I GC CS+C+I GR ++SRS D II E+E + Sbjct: 132 THKMPRVLISPNFWVYVKISEGCNNFCSYCTIPFIRGR-LRSRSIDDIIKEVEILVQKGV 190 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 +I Y A ++L + + Sbjct: 191 KEINLI----AQDTTRYGEDLYGKSA------------------------LVDLLKSIEN 222 Query: 484 LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSY 543 +KG + I + + +IK + V Y I +H + L KM + Sbjct: 223 IKGDFYVRILYSYPSRVTKDLINFIK--VSEKVVPYFDIPIQHVNDEILKKMNRSYKK-- 278 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 D ++ T + ++ + + PG +E+ L ++K + F +Y Sbjct: 279 DDIIRVWSTIRENF-EDAVIRTTVMVGFPGETEENFEELIAFIKAYPFDRLGAFTYYNEE 337 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 S + + KI + K ++ K L R D + +G Sbjct: 338 GTISKN-FDGQIDEDEKIRRYDILMSTQKEISKKLNAKLLGREFDVI--IENEKGKYFIG 394 Query: 664 KKHLIGSRRDCLVPAPTIEEMREA 687 + D ++ P + Sbjct: 395 RSWREAPEVDGVIMIPKEGSRSIS 418 >UniRef50_D1BNC4 MiaB-like tRNA modifying enzyme YliG n=5 Tax=Veillonellaceae RepID=D1BNC4_VEIPT Length = 448 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 55/348 (15%), Positives = 96/348 (27%), Gaps = 71/348 (20%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 RI V I GC GC+FC I + G +SR+ +SI E+E + T Sbjct: 138 PRIQTTPRYSAYVKIAEGCNNGCTFCIIPKVRG-AFRSRTIESIKAEVERLAATGVKEVV 196 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 +I Y + + + T ++GI Sbjct: 197 LI----AQDTTSYGIDLNNGKPLLTTLLKELTT-----------------------VEGI 229 Query: 488 KKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRF 546 + I + + E I + + Y+ I +H L +M + +R Sbjct: 230 EWIRMLYLYPTFFSDELLDII--VNEPKLCKYVDIPLQHVNNDILKQMNRRDDRNDIERL 287 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 + A L I PG DE L ++K+ +F V + Sbjct: 288 LKKIR----NAPTHITLRTSIIVGFPGETDEQFEELCDFVKEIKFDNMGVFTYSQEAGTP 343 Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 + + +P+ K+ R H + I+ A+ + Sbjct: 344 AGA----------------REDQIPEEVKEERYHVLM----------SIQAAISEENNRD 377 Query: 667 LIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATA 714 L G+ +V L K + Sbjct: 378 LEGTIDYAMVEEIE----------EGENNTLLAKGRLKSQAPDVDGNM 415 >UniRef50_C9LR40 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR40_9FIRM Length = 447 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 35/252 (13%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 R + I GC C+FC I G+ ++SR + + EI + + L G Sbjct: 152 KTRAFIKIQEGCDNYCTFCIIPFARGK-LKSRRQSDAVEEIRRLVEKGYREVV----LTG 206 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 Y + L + + +I + S Sbjct: 207 IHLGNYGKDLH------------------------DGTSLSTLVTELVRIPDLLRIRLGS 242 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 +++ E R I+E V +L + + + L +M + +KEL Sbjct: 243 IESVELSDELIRIIRE--EPKVCPHLHLPIQAGSDDILKRMNRHYR--LAEYKELIRNLR 298 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 K+ L I PG +E+ L++ +F V + P + Y Sbjct: 299 KEI-PGLALTTDLIVGFPGETEENFRETLDTLQELQFSAIHVFPYSPRKGTPAAA-YPNQ 356 Query: 615 KNPLAKIGYKSE 626 P K + Sbjct: 357 VKPEIKKERAAR 368 >UniRef50_A6LKT7 MiaB-like tRNA modifying enzyme n=3 Tax=Thermotogaceae RepID=A6LKT7_THEM4 Length = 429 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 116/358 (32%), Gaps = 57/358 (15%) Query: 287 WEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLST 346 + V+ + ++ + L ++ ++++ G V+++ ++ Sbjct: 68 PDSKIVVTGCYSQLFA-RELLEEEVDLILGNKEKKRIESIIENVG---VFVDRTY--WNS 121 Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 +++D + E R + + GC CS+C+I G I+S+ Sbjct: 122 DDLDEEYVF--------------SSLSERTRAFIKVQDGCTNVCSYCTIRYARGMRIRSK 167 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 + +++EI + + + ++ + G Y + Sbjct: 168 PIELVVSEILRMVNK--DYKEIV--ITGLNLGKYGKDKE--------------------- 202 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEH 526 +NL + +KG +I ++S DI E ++I + V +L + + Sbjct: 203 -----TSLLNLLKNVVKIKGDFRIRLSSINPEDINDELIKFI--VNEEKVCNHLHVPLQS 255 Query: 527 TEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWL 586 L KM + + F L K+ + + PG ED + Sbjct: 256 GSTKILEKMRR--NYTQSDFLNLAYKLRKE-DINFSITTDIMVGFPGETQEDFEETLKVV 312 Query: 587 KKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL 644 K+ F + P + M K P ++ ++ + + K L+ Sbjct: 313 KEVMFSKVHTFRYSDRPNTLAYKM--ENKVPGNVKKERAIELDKFSKEVAKEYRKRLV 368 >UniRef50_Q58275 Putative methylthiotransferase MJ0865 n=11 Tax=Methanococcales RepID=Y865_METJA Length = 449 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 96/306 (31%), Gaps = 48/306 (15%) Query: 321 GCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSV 380 G L K GD + IN P E+ D LP + + Sbjct: 124 GDKEGLAYKEGD-EIVINYP-----KEKPDLNHPLPLIPKDIEQ------QSIRGANVYI 171 Query: 381 NIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMY 440 RGC G C+FC + + G+ I+SR + ++ E++A + + G T ++Y Sbjct: 172 ETHRGCLGNCTFCQVPKFFGKTIRSRDVEDVVEEVKAFKRAGAKRIA----ISGGTGSLY 227 Query: 441 MLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDI 500 + N + L + ++ G + + +R D Sbjct: 228 AFK-----------------------KSINRDKFFELLEKVSEVIGKNNLSVPD-MRVDY 263 Query: 501 AVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKE 560 I E ++ G++ E + L M K ++ + +K G + Sbjct: 264 V---DEEILEAIKNYTIGWVFYGIESGSDKILKDMKKGTNR--EKNLDAI-KLAKDCGVK 317 Query: 561 QYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAK 620 + FI A+P + D + ++ V P P + + Sbjct: 318 --VAGSFIVAYPTETEMDYLLTKDFIVDAELDDVFVSIAEPIPTTELCDLVLSMPKEENL 375 Query: 621 IGYKSE 626 + E Sbjct: 376 LYKMHE 381 >UniRef50_Q5LJ70 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=42 Tax=Bacteria RepID=MIAB_BACFN Length = 457 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 53/331 (16%), Positives = 97/331 (29%), Gaps = 62/331 (18%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I V+IMRGC C++C + GR +SR +SI+NE+ + L G Sbjct: 160 HISGFVSIMRGCNNFCTYCIVPYTRGRE-RSRDVESILNEVADLVSKGYKEI----TLLG 214 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL-KGIKKILIA 493 N Y + L R + GI ++ Sbjct: 215 QNVNSYRFEKEGGEVV----------------------TFPMLLRLVAEAAPGI-RVRFT 251 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS-YDRFKELFDT 552 + D++ E I ++ +V ++ + + L M + Y Sbjct: 252 TSHPKDMSDETLEVIAQV--PNVCKHIHLPVQSGSSRILKLMNRKYTREWYLDRVAAIKR 309 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 G L S +ED ++ + + + P ++ Sbjct: 310 IVPDCG----LTTDIFSGFHSETEEDHRESLSLMEACGYDAAFMFKYSERPGTYASKHL- 364 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 + VP+ K RRL++ + ++ L A IG Sbjct: 365 --------------EDNVPEEIKVRRLNEIIA----------LQNRLSAESNNRCIGKTY 400 Query: 673 DCLVPAPTIEEMRE-ARRQNRNTRPALTKHT 702 + LV + + R +N + T Sbjct: 401 EVLVEGVSKRSRDQLFGRTEQNRVVVFDRGT 431 >UniRef50_B1CA07 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA07_9FIRM Length = 448 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 91/316 (28%), Gaps = 52/316 (16%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P + R + + GC C++C I G+ +SR + I++E + + D Sbjct: 138 PIFETDRTLTTPSHFAYLKVSEGCDKHCTYCVIPSIRGKQ-RSRKIEDIVSEAKRLADRG 196 Query: 423 -PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 + D+G ++Y L Sbjct: 197 VKELILIAQDVGEYGTDLYG-----------------------------ERKLPELLEEL 227 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVG-----GYLKIAPEHTEEGPLSKMM 536 ++ I I + + + EL V Y+ + +H + L KM Sbjct: 228 NKIESIHWIRV-------LYIYPETVSDELIDKFVNLDKVLKYIDMPLQHINDNILKKMG 280 Query: 537 KPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQV 596 + + L + + + FI+A PG +E+ L ++K ++ Sbjct: 281 RKTSK--EDILTLIRKLRSKVNGIK-IRSTFITAFPGETEENHKELLEFIKLYQLDRVGF 337 Query: 597 QNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIR 656 + + M + + ++ + D L ++ L ++ Sbjct: 338 FKYSREEGTPAYDM--DNQVSEEIKDERYMELMSAQEDVSEELMESYL----DKTLEVLI 391 Query: 657 QALEAMGKKHLIGSRR 672 + IG Sbjct: 392 EEKVEDEDNVYIGRSY 407 >UniRef50_C8QZD6 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZD6_9DELT Length = 463 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 76/461 (16%), Positives = 134/461 (29%), Gaps = 76/461 (16%) Query: 226 IVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPK 285 +V+E L S + I E + K + V + Sbjct: 25 LVEEGLRPVSEPGEADVLLVNTCGFIQSAVEEGIDTILGLIEQKKSPAVRVVVCGCLVQR 84 Query: 286 PWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLS 345 LP + G + + + A+R+ E P A L Sbjct: 85 YGSGLVEELPEVDLFLGTEEVSSIAARLRALE------EGRAAPESGSVPAGAPAADSLR 138 Query: 346 TEEMDSVFA-LPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQ 404 +D + LP +P PA+ R + I GC CS+C I G ++ Sbjct: 139 YRPVDDLQRFLPNATLP----RRLTTPAH---RAYLKITEGCGNRCSYCMIPAIRG-PLR 190 Query: 405 SRSEDSIINEIEAIRDTV-PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 SR I++E A+ T V DL Y L Sbjct: 191 SRRPADILHEARALAAAGVKELTLVAQDL-----TAYGLD-------------------- 225 Query: 464 CPHMDTNHEPTINLYRRA-RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKI 522 + +L + R+L + I Y V D A + Y + Sbjct: 226 ---LGPGGPRLPDLLAQLHRELPAAQVPWIRLLYLYPSRVNDELLELVAANPRILPYFDL 282 Query: 523 APEHTEEGPLSKMMKPGMGSY-DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVN 581 +H + L M +P + + +A F+ PG R+ED+ Sbjct: 283 PFQHVADPVLKAMNRPYGEALVRELVDRVRRLVPRAVIRST----FMVGFPGEREEDVEA 338 Query: 582 LALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHK 641 LA +L+ R + + + + T+ VP+ K++R + Sbjct: 339 LAAFLRDCRLEHVGMFTYCNEEGSAAATL----------------PGQVPEELKEQRFQR 382 Query: 642 ALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE 682 + ++ + + +G + LV + E Sbjct: 383 LMA----------LQAEISLAANQARVGQVEEVLVEGVSSE 413 >UniRef50_B2V8N8 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Aquificales RepID=RIMO_SULSY Length = 430 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 56/424 (13%), Positives = 126/424 (29%), Gaps = 54/424 (12%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 L C N P E +L+ + ++ K Sbjct: 11 LGCPKNLVDTEVLIGKLNQENISFTANPEEADVILINTCGFIEPAKEESIETILEAVKLK 70 Query: 319 NPGCARALMQKHGDRYVWINPPAIPLSTE--EMDSVFAL------PYKRVPHPAYGNARI 370 + ++ + L E E+D L P P RI Sbjct: 71 QNSNKKIIVTGC----LVERYKQE-LEKEIPEVDYFIDLKNQSQIPVLFDIKPKENTKRI 125 Query: 371 PAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS 430 + + I GC CSFC+I G+ +S+ ++++ E + + + ++S Sbjct: 126 ISTPKHTAYLKISEGCDHTCSFCAIPNIRGKH-RSKPIEALVEEAKYLANLGVKELNIVS 184 Query: 431 DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI 490 + Y L + + GIK I Sbjct: 185 ----QDTSYYGYDLY------------------------GKPMLFELLQHLEKIDGIKWI 216 Query: 491 LIASGVRYDIAVEDPRYIKELA-THHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 + + D + K + + + Y+++ +H+E+ L MM+ + Sbjct: 217 RLYYLYP---STVDEDFFKFIKGSEKILHYIEMPIQHSEDKILKDMMRGYRK---KKLYQ 270 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 + ++ + + I +P +ED N+ ++++ +F V + + Sbjct: 271 ILEWKEKYTPDMTIRSSVIVGYPTETEEDFENMKNFIQEAQFDWLGVFVYSHEEGTPAYQ 330 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 + K P + + ++ + + + +K+L+ +I + IG Sbjct: 331 -KHKDKIPKKEKIRRLNEISALQENITEQKNKSLI----GKELDIIIDGFSEEWETLPIG 385 Query: 670 SRRD 673 Sbjct: 386 RSYR 389 >UniRef50_D0NCV9 CDK5 regulatory subunit-associated protein 1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NCV9_PHYIN Length = 594 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 113/348 (32%), Gaps = 31/348 (8%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 V+IMRGC CS+C + GR +SR +SI++E+ A+ D L Sbjct: 211 HSPSAFVSIMRGCNNMCSYCIVPFTRGRE-RSRVMNSIVDEVRALSDQGVKEVV----LL 265 Query: 434 GPTANMYMLRCKSPRAE-QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILI 492 G N Y + AE S + ++ D +L + + ++ Sbjct: 266 GQNVNSYHDKKSEGAAEKGRGYVSSTGFSNMFRSRDAPGFRFADLLDKVSRVDPEMRLRF 325 Query: 493 ASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDT 552 S D E + E ++ + + + L +M + S + + L D Sbjct: 326 TSPHPKDFPNEVLDLVNE--RPNICKQIHMPAQSGSTTMLERMRRG--YSREAYLALVDN 381 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 + + FI+ G +E+ + +++ + + + ++ Sbjct: 382 MRARI-PGVAISSDFIAGFCGETEEEHADTISLMRQVCYDQAFMFAYSVRARTHAAHR-- 438 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 + V + +K RRL + + + + + + + + G R Sbjct: 439 -------------MEDDVTQEEKLRRLREVIDTFSEVVTRKNHIEDSDRLHIVLVQGPSR 485 Query: 673 DCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASST 720 T ++ + + + R + R A + +S Sbjct: 486 R-----STDDDPKLTGLTDTSKRCVFFNQKMPGSLRAFTKQAGEVASE 528 >UniRef50_D2QWN1 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QWN1_9PLAN Length = 465 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 51/413 (12%), Positives = 120/413 (29%), Gaps = 65/413 (15%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHET 318 L C N + + + +P +V++ + ++ + A + Sbjct: 24 LGCPKNLVDSERMLGLLKLDGYDLVAEPDGADFVVVNTCGFIERARTESFQAIDEMLELK 83 Query: 319 NPGCARALM-----QKHGDRYVWINPP----------AIPLSTEEMDSVFALPYKR---V 360 G + ++ + + + P ++ + +L +R Sbjct: 84 KQGRTKGVIVSGCLAERQKEQLLEDRPGIDCLVGVFGREQITQVADRLLGSLEEQRSVFQ 143 Query: 361 PHPAYGNARIPAYE---MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA 417 P P + + I GC C+FC+I + G+ ++ + ++ E Sbjct: 144 PAPIRALSDTDRLRITPRHFAYLKISEGCDRLCTFCAIPKMRGKH-ATKPMEEVLKEARQ 202 Query: 418 IRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINL 477 + ++ Y + L Sbjct: 203 LAADGVKELVIV----AQDTTYYGIDLY------------------------GEPRLAEL 234 Query: 478 YRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK 537 R ++GI+ I + I E I + + + Y+ + +H + L +M + Sbjct: 235 LREIEKVEGIQWIRLMYFYPMYITDELIDVIAK--SEKIVPYIDMPLQHINDTMLRRMSR 292 Query: 538 PGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQ 597 + ++A L FI+ PG E L +L++ +F V Sbjct: 293 RVTRAETEL--QIKKL-REAIPNLTLRTTFITGFPGETQEQYEELREFLREQKFERMGVF 349 Query: 598 NFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPA 650 + P + + + SE+V + + + + L + A Sbjct: 350 TYSFEPDTPAANLP----------DHLSEEVKNERREALMAVQQELAFAWNEA 392 >UniRef50_B8FGL8 MiaB-like tRNA modifying enzyme YliG n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGL8_DESAA Length = 451 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 66/477 (13%), Positives = 125/477 (26%), Gaps = 78/477 (16%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPS--FEKVKGDKVLYAHASRILHH 316 L C N + A A P E +++ S F + D+ + + Sbjct: 16 LGCVRNLVDSELILGALASGGFALTEDPAEAETIIINSCGFVRAAVDETIDVVLEMAHYK 75 Query: 317 ETNPGCARALM----QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPA 372 E L Q++G + + P + + + R P P+ Sbjct: 76 EEGRCQRLVLCGCMAQRYG-KELEEALPELDMVVGPGAHKDIVELLRRPTGFICQVPDPS 134 Query: 373 YEMIR-------------FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIR 419 ++ + I GC C+FC I + G +SR D I+ E + Sbjct: 135 TAPLQQASFPRICSTPHMAYIKISEGCPDRCTFCMIPQLRG-AWRSRPLDDIVEEAGNLI 193 Query: 420 DTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYR 479 ++ Y L N L Sbjct: 194 QWGAKEIILV----AQDTTAYGLDFDKQ----------------------NRTSLDQLLS 227 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG 539 L+G + G + + V Y + +H + L M + Sbjct: 228 SLCRLEGETRFRFLYGHPNRVTDALLE--TAASQPRVCSYFDLPVQHGSDRILKMMGR-- 283 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 + D LF+ + L + PG +ED L ++++ RF V + Sbjct: 284 KNTRDEMLRLFEKIRATV-PDVALRTTALVGFPGETEEDFNQLVEFVQEARFDHLGVFAY 342 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQAL 659 + S + VP+ +R + R + + Sbjct: 343 SDAEEIPSHRL----------------PDHVPEDTAIKRRDYIMDR----------QNTI 376 Query: 660 EAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKK 716 +G LV + + + P + T + + P + Sbjct: 377 SLDNNADRVGKTYTALVLGESGDPEYPYWGKTCLQAPDVDGVTFIQGEDLGPGRLAR 433 >UniRef50_B9CKI3 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKI3_9ACTN Length = 460 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 68/463 (14%), Positives = 131/463 (28%), Gaps = 77/463 (16%) Query: 243 DTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKG 302 + + L CA N+ + + P E VL+ + + Sbjct: 4 PSNTPTIDKKNILFVTLGCAKNEVDTDRMRALLFAQGFSEVDTPNEADIVLINTCSFLAS 63 Query: 303 DKVLYAHASRILHHETNPGC---ARALMQKHGDRYVWINPPAIP-----LSTEEMDSVFA 354 + + + G + RY P +P + +E D + Sbjct: 64 ATEESIETTLQIAEGASHGVRSLPIVMCGCVPSRYGSKLPEELPEVAAFVRADEEDGIVE 123 Query: 355 -----LPYKRVPHP-AYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSE 408 L +R P + + E V I GC C+FC+I G QSR Sbjct: 124 VVSEVLGIERTPQSVIAAHGMLRTVEGASAYVKISDGCDRFCAFCAIPYIRG-HYQSRPA 182 Query: 409 DSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMD 468 D I++E+ ++ + +I G ++ + Sbjct: 183 DEILSEVSSLMEGGVREIILI----GQDTGIWGNDIAETNTGEV---------------- 222 Query: 469 TNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELA-----THHVGGYLKIA 523 L R+ + + + ++ EL T Y+ I Sbjct: 223 ---PTLAWLMRQVAQVVRPYNGWVRV-----LYLQPEGMTDELISTIRDTPECLPYIDIP 274 Query: 524 PEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLA 583 +H E L++M + G + LFD ++ L + PG +E+ L Sbjct: 275 IQHCSERVLARMGRSGSA--PELRSLFDRLRREI-PGMVLRTTGMCGFPGETEEESDELY 331 Query: 584 LWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKAL 643 ++++ F V + P +M VP K R + + Sbjct: 332 DFIQEQEFDYTSVFTYSPEEGTAGASM----------------PNQVPDEIKMERTQRLI 375 Query: 644 LRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 + + L G +G R + ++ + Sbjct: 376 ----------DLVEELGFAGTARHVGERCEVIIDGIEDTDEGF 408 >UniRef50_B0MMU1 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MMU1_9FIRM Length = 446 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 83/264 (31%), Gaps = 50/264 (18%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + I GC CS+C+I G++ +SR ++II E + + ++ Sbjct: 146 PHYAYLRIADGCSNKCSYCAIPLIRGKM-RSRKMENIIEEAKKFAENGVKELVIV----A 200 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 Y + A +L ++ + GIK I + Sbjct: 201 QDVTAYGIDLYKKYA------------------------LPDLLKQLCKIDGIKWIRLLY 236 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 + E IK V Y+ I +H + L M + G +ELF Sbjct: 237 CYPERMTDELIETIK--TEDKVLNYIDIPIQHCNKEILRNMYRGGDEQ--SLRELFAKLR 292 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 ++ L I+ PG +E LA ++ +F + + M Sbjct: 293 REI-PGVVLRTTLITGFPGETEEQFSELAEFVNDIKFERLGCFAYSAEEDTPAAEM---- 347 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRR 638 V +G++QRR Sbjct: 348 ------------PDQVDEGERQRR 359 >UniRef50_A9FST8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=MIAB_SORC5 Length = 498 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 73/467 (15%), Positives = 135/467 (28%), Gaps = 75/467 (16%) Query: 251 IPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFE-KVKGDKVLYAH 309 +P C N + + + E ++L + + K ++ L + Sbjct: 1 MPRYSITTFGCQMNVHDSERMHDVLRCAGYTEAGSADEADVLVLNTCSVREKAEQKLRSE 60 Query: 310 ASRILHHETNPGC-----ARALMQKHGDR--------YVWINPPAIPLSTEEMDSVF--A 354 R+ + A + Q+ G+R V + P IP + + Sbjct: 61 VGRLARWKRERADRVLVVAGCVAQQEGERLLKQMRAIDVVVGPDNIPELPGLLGDLAIGG 120 Query: 355 LPYKRV-----------PHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRII 403 LP R P ++ V +M+GC CSFC + G Sbjct: 121 LPIARTVFDLDAPRFLVASPPSPSSSSSPRAAPTAFVTVMKGCDERCSFCIVPHTRGPE- 179 Query: 404 QSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDI 463 + R D I+ EI A+ L G T N Y + Sbjct: 180 RYRPSDEIVAEIAALVAAGTREV----TLLGQTVNSYRDPLGALPRAPG----------- 224 Query: 464 CPHMDTNHEPTINLYRRAR-DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKI 522 D + L RR D+ G+ ++ S + EL + ++ + Sbjct: 225 ASADDPDESEFAALLRRVAADVPGLARLRYTSPHPRHLTPSLVLAHAEL--PVLPRHVHM 282 Query: 523 APEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNL 582 + + L +M++ + + +A L I PG ++D Sbjct: 283 PVQSGSDRVLRRMIR--RYTRAEYVARTRALV-EAVPGLTLSTDIIVGFPGETEDDFAAT 339 Query: 583 ALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKA 642 +++ F+ + P + + VP+G K RL + Sbjct: 340 LSLVREVGFKGLFGFKYSRRPHTPALKL----------------PDDVPEGVKGERLARL 383 Query: 643 LLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARR 689 +AL A L+G+ ++ LV E Sbjct: 384 FEES----------EALLAAHLSALVGTTQEVLVEGRDKERGHGGAG 420 >UniRef50_Q54KV4 CDK5RAP1-like protein n=2 Tax=cellular organisms RepID=CK5P1_DICDI Length = 607 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 56/381 (14%), Positives = 113/381 (29%), Gaps = 46/381 (12%) Query: 324 RALMQKHGDRYVWINP------PAIPLSTEEMDSVFALPYKRVPHPAYG--NARIPAYEM 375 L++ + + P P++ + E+ + A+ Y + Sbjct: 195 EKLLESDMKVDIVVGPDAYRSLPSLLATLEDGEQQTAINVILSADETYADIKPVRKSDNQ 254 Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 + V+IMRGC CS+C + GR +SR DSI+ E++ + D GF + L G Sbjct: 255 VSAYVSIMRGCNNMCSYCIVPFTRGRE-RSRPIDSILREVKDLSDQ--GFKEI--TLLGQ 309 Query: 436 TANMYM-------------LRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 N + + + + E + + I L Sbjct: 310 NVNSFNYYEESNNNNNENFIDTQKNKLELESLKPREGFKTIYKSPKK-GITFTKLMELVS 368 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELAT--HHVGGYLKIAPEHTEEGPLSKMMKP-G 539 + +I S D P + EL ++ L I + L M + Sbjct: 369 KVDPEIRIRFTSPHPKDF----PDDLLELIKNQPNICKQLHIPAQSGSSKVLESMRRGYT 424 Query: 540 MGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNF 599 SY + + FIS G D+D ++ + + + Sbjct: 425 RESYIELIDTIKRVLPGCA----ISSDFISGFCGESDQDHNETISLMEYVGYENAFMFMY 480 Query: 600 YPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQAL 659 ++ K ++ V + + + +H ++ Sbjct: 481 SLREKTHAHRQLKDDVPTTLKNSRLTQVVDTFYKRLKEKNQLEIGNHHL-----VLVDGF 535 Query: 660 EAMGKKHLIG---SRRDCLVP 677 +K +G + + L+ Sbjct: 536 SKRSEKDFVGRTDTNKKVLIS 556 >UniRef50_Q1Q4S9 Similar to 2-methylthioadenine synthetase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4S9_9BACT Length = 437 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 74/463 (15%), Positives = 135/463 (29%), Gaps = 81/463 (17%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHA-SRILHHE 317 L C N A + A P + +++ + + K ++ + Sbjct: 15 LGCTKNLVDAEEMLGRIAANGSTICQYPEDAEVLVVNTCGFIDDSKKESIDMIFKMAKLK 74 Query: 318 TNPGCARALMQKH-GDRYVWINPPAIPLSTEEMDSVFALP-YKRVPHPA----------Y 365 N C + ++ RY IP E+D V L ++++ H Y Sbjct: 75 ENAQCKKLIVTGCLAQRYSAELKSEIP----EIDDVVGLKDFEKITHLTGKRQMDNSTIY 130 Query: 366 G----NARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDT 421 RI + I GC C++C+I G SRS ++I+ E + Sbjct: 131 QGDDWRNRIRLTPKHYSYLRISDGCDNRCTYCAIPGIRGN-FMSRSIENILEESRQMASE 189 Query: 422 VPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA 481 +IS Y L + L + Sbjct: 190 GVKEINIIS----QDTTSYGLDIYGKQMLHV------------------------LLEKI 221 Query: 482 RDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMG 541 ++GI+ I + E I E + Y+ + +H + L KM + Sbjct: 222 AAIEGIQWIRLLYTHPGHFYPELINTINE--HETICKYIDLPIQHINDTILGKMGRNTTR 279 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 + E +++ + L I PG DE L ++KK +F V + Sbjct: 280 ---KSIETLINNLRRSIRSIVLRTSVIVGFPGETDEQYQELLEFIKKTKFERLGVFAYSK 336 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEA 661 + KQ RL++ +L A ++ + Sbjct: 337 EENTPAAKFKKQVGK----------------KVKQERLNEIML-----AQREIVWE---- 371 Query: 662 MGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPM 704 K+LIG + +V + R + + K Sbjct: 372 -NNKNLIGKKASVIVDEKEVVSGMLIGRTSGDAPEVDGKVFIN 413 >UniRef50_C7RDC7 RNA modification enzyme, MiaB family n=6 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDC7_ANAPD Length = 431 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 59/382 (15%), Positives = 117/382 (30%), Gaps = 57/382 (14%) Query: 282 PRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPA 341 R E ++ + +VK ++V ++ N L + V N Sbjct: 63 ARRDNPEAVIAVMGCYSQVKPEEVAAIEGVDVVLGSRNKEEVVDLCEN-----VLQN--- 114 Query: 342 IPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGR 401 + +D V + + + + M R + I GC CS+C I G Sbjct: 115 ----KKVIDKVLSFSETKTIEELEISNQ---EAMTRAYMKIQDGCNMYCSYCLIPYARGN 167 Query: 402 IIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYP 461 I SR DSI E + + G+ ++ L G Y + Sbjct: 168 -IASRDMDSIKKEAKRLAQN--GYKEIV--LTGIHVASYGKDLR---------------- 206 Query: 462 DICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLK 521 N I++ GI++I ++S I + +K AT + Sbjct: 207 --------NGTSLIDVIEEVSKTDGIERIRLSSMEPRHITRDFLERMK--ATEKACDHFH 256 Query: 522 IAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMV 580 ++ + + L M K + +L AG L I P +++ Sbjct: 257 LSLQSGSDEILKAMNRKYDTKIFKEKVDLIREVFPNAG----LTTDIIVGFPTETEKNHE 312 Query: 581 NLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLH 640 ++K+ +F + + + +M P K E + + ++ Sbjct: 313 ETKDFVKEIKFAKTHLFKYSKRDGTKAASM-----KPEVNGNIKKERLKELEAIEE-VNR 366 Query: 641 KALLRYHDPANWPLIRQALEAM 662 L+ ++ ++ M Sbjct: 367 LNFLKNQIGKTLSVLFESKSDM 388 >UniRef50_A0LV11 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Acidothermus cellulolyticus 11B RepID=RIMO_ACIC1 Length = 475 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 81/392 (20%) Query: 326 LMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYG-NARIPAY----------- 373 + Q+ D V P P + D LP V P IP + Sbjct: 105 IAQRLED--VLAGRPPAPHTPR--DRRTLLPLTPVDRPRAAAEVGIPGHLGGPRVLRHRL 160 Query: 374 -EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDL 432 + + I GC C+FC+I G + SR I+ E + + D ++S+ Sbjct: 161 DDSPVAPLKIASGCDRRCTFCAIPSFRGAFV-SRPPADILREAQWLADHGAREIVLVSE- 218 Query: 433 GGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILI 492 + Y P A L + G+ ++ + Sbjct: 219 ---NSTSYGKDLGDPFA------------------------LEKLLAAFGGVDGLVRVRV 251 Query: 493 ASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELF 550 A P I +AT HV Y ++ +H L +M + G + Sbjct: 252 TY---LQPAEVRPALIDVIATAPHVAPYFDLSFQHASPRVLRRMRRFGGSEEFLNLLAEI 308 Query: 551 DTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 + +A + I PG +ED+ L +L+ R V + ++ Sbjct: 309 RRRNPRAAVRSNV----IVGFPGETEEDVAELGEFLRAARLDGIGVFGYSDEDGTEAS-- 362 Query: 611 YYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 +P+ + + R+ + I + + A + +G Sbjct: 363 --------------GFPEKIPEQEIRSRV----------DDIAGIAEEVTADRARARLGE 398 Query: 671 RRDCLVPAPTIEEMREARRQNRNTRPALTKHT 702 D L+ + + T Sbjct: 399 TVDVLIDGVDDDRPDACYGYTEVQAVDVDGVT 430 >UniRef50_A9BEU9 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Thermotogaceae RepID=RIMO_PETMO Length = 435 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 61/417 (14%), Positives = 128/417 (30%), Gaps = 58/417 (13%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAH-ASRILHHE 317 L C N + P Y+ + + ++ K + + Sbjct: 9 LGCPKNDADMEIFKGLLQSKGYKYESNPQLANYIFIDTCGFIEEAKKESIETIFEYVSLK 68 Query: 318 TNPGCARAL-----MQKHGDRYVWINPPAI--------PLSTEEMDSVFALPYKRVPHPA 364 N + + Q++ D + + P I P + E +KR Sbjct: 69 DNNKNLKVIPIGCLTQRYFD-DILKDIPEIDGLYGVLSPKTIVEKIENGEYFFKRDIPET 127 Query: 365 YGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 + +I A + V I GC C+FCSI +G+ +SRS + I E+E + Sbjct: 128 LYDCKIRAIPDSHYAYVKIGDGCSRNCAFCSIPTFKGKP-KSRSIEEINEEVEFLVSKGV 186 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 ++S +Y + +A +L + + Sbjct: 187 KEIILVS----QDNTLYGIDNYQKQA------------------------LPDLLDKLNN 218 Query: 484 LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSY 543 +KG I + ++ E I V Y + +H + L M + + Sbjct: 219 IKGKFWIRVMYLHPDFLSEEIIESIHR--NEKVLNYFDVPIQHISDKILQSMGRHKKRN- 275 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 +LF+ K+ + + PG + ED L ++K+ +F F Sbjct: 276 -ELIKLFEKIRKE---PSAIRTTLMVGFPGEKAEDFEELVDFVKEIKFERMGSFIFSKEE 331 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE 660 S T+ + + ++ + + + ++ + ++ + E Sbjct: 332 NTKSFTLP--EQIDEQIKKQRQNELMTVQSEISKN----IMEKYIGETLEVLLEEKE 382 >UniRef50_Q2J750 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Frankia RepID=RIMO_FRASC Length = 523 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 60/396 (15%), Positives = 102/396 (25%), Gaps = 75/396 (18%) Query: 334 YVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGN-------ARIPAYEMIRFS----VNI 382 V P S D LP V A +P + + I Sbjct: 131 AVLAGTPVPAHSPR--DRRTMLPITPVDRAAPALPPAAVSTGAVPLRRRLTAGPVAVLKI 188 Query: 383 MRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYML 442 GC C+FC+I G + SRS D ++ E E + ++S+ + Y Sbjct: 189 SSGCDRRCAFCAIPSFRGSHV-SRSPDDVLAEAEWLAGQGARELVLVSE----NSTSYGK 243 Query: 443 RCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAV 502 RA L + + GI ++ ++ Sbjct: 244 DLGDLRA------------------------LEKLLPQLAAVSGIVRVRTVYLQPAEMRP 279 Query: 503 EDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELFDTYSKQAGKEQ 561 + L T + YL ++ +H L +M + G G + + + G Sbjct: 280 SLLEVL--LTTPGLAPYLDLSFQHASPPVLRRMRRFGGSGHFLDLLARARALAPELGARS 337 Query: 562 YLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKI 621 + I PG ED+ LA +L+ V + + Sbjct: 338 NV----IVGFPGETPEDVDILAEFLEAAELDAVGVFGYSDEEGTEAA------------- 380 Query: 622 GYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTI 681 +P +RR + + + L A IGSR LV Sbjct: 381 ---GLTDKIPDELIERRRVRV----------TDLVEQLTAARADARIGSRVQVLVEEVAG 427 Query: 682 EEMREARRQNRNTRPALTKHTPMATQRQTPATAKKA 717 + + Sbjct: 428 GLATGCAAHQQAEVDGGCVVRLSPGGAADDGPERLG 463 >UniRef50_A8ERE9 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=2 Tax=Campylobacterales RepID=MIAB_ARCB4 Length = 436 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 90/288 (31%), Gaps = 38/288 (13%) Query: 377 RFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPT 436 R SVNI GC C++C + G I S + I+ ++ + L G Sbjct: 143 RASVNISVGCDKKCTYCIVPSTRGEEI-SIPPEMIVEQVRKSVEQGAVEVM----LLGQN 197 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 N Y + R + T L + + G+++I S Sbjct: 198 VNSYGRKFSDKREKYT---------------------FTKLLQDVSKIDGLERIRFTSPH 236 Query: 497 RYDIAVEDPRYIKELAT-HHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSK 555 + D +I+E A + + + + L M + + F + Sbjct: 237 PLHM---DDEFIEEFAKNPKISKCIHMPLQSGSTSVLKAMKRGYSKEW--FLNRASKM-R 290 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + + I A PG ED ++ +++ +F + P P + + Sbjct: 291 ELVPNLRITTDIIVAFPGETQEDFLDTLDVVEQVKFDQIFNFKYSPRPGTEALNLKDKEL 350 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 + + + K + + K + ++ ++L+ G Sbjct: 351 PDEIGSQRLIDLIELHKRYLEESMPKLI-----GETLNILVESLKPNG 393 >UniRef50_C5D4T7 RNA modification enzyme, MiaB family n=92 Tax=Bacillales RepID=C5D4T7_GEOSW Length = 451 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 95/282 (33%), Gaps = 53/282 (18%) Query: 365 YGNARIPAY-EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 + +P + + R S+ I GC C+FC I G +++SR +I + + + D Sbjct: 131 FEEMDVPEFTDRTRASLKIQEGCNNFCTFCIIPWARG-LMRSRDPKEVIRQAQQLVD--A 187 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 G+ ++ L G Y K L R + Sbjct: 188 GYKEIV--LTGIHTGGYGTDLKD-------------------------YSFAALLRDLDE 220 Query: 484 -LKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 + G+K++ I+S I E ++ + + +L I + L +M + + Sbjct: 221 QVVGLKRLRISSIEASQITDEIIEVLQR--SDKIVRHLHIPLQSGSNTVLKRMRR--KYT 276 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 + F E ++ E + I PG +E+ + ++++ RF V + Sbjct: 277 VEFFAERLQRL-REVFPELAITSDVIVGFPGETEEEFMETYHFIREQRFSELHVFPYSKR 335 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALL 644 + M V + K R+H+ + Sbjct: 336 TGTPAARM----------------PNQVDEEVKNERVHRLIA 361 >UniRef50_B9Y777 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y777_9FIRM Length = 460 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 46/320 (14%), Positives = 92/320 (28%), Gaps = 45/320 (14%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + I GC CS+C+I G + S + ++ E + + VI Sbjct: 154 PWTAYLKIAEGCDNRCSYCAIPGIRGGYV-SFPIEDLVAEAKQLASEGVKELVVI----A 208 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 + Y +L + G+ I + Sbjct: 209 QDTSRYGTDLY------------------------GRRRIWDLLTELNAIDGLHWIRVLY 244 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYS 554 +I E IK+L V Y I +H + L M + G S + Sbjct: 245 LYPDEIDDEFVTGIKDL--KKVIPYFDIPVQHGSDKMLKLMNRRG--SVESILRTV-KLI 299 Query: 555 KQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTG 614 ++ L I P +ED L ++K+ R+ F + TM G Sbjct: 300 RENYDMPVLRTTMIVGFPQETEEDFQMLIDFIKEVRWDRLGAFTFSNEEDTPAYTM--DG 357 Query: 615 KNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDC 674 + + + E + + + +AL+ ++ + + L G Sbjct: 358 QISQEIMDERLERLMTVQNQIAQENGEALI----GKTLEVLVE-----NQDGLTGYYHGR 408 Query: 675 LVPAPTIEEMREARRQNRNT 694 + + + ++ + Sbjct: 409 GIHSAPDGIDGLIKFKSSHH 428 >UniRef50_Q1J1F6 Ribosomal protein S12 methylthiotransferase rimO n=47 Tax=Bacteria RepID=RIMO_DEIGD Length = 485 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 65/428 (15%), Positives = 129/428 (30%), Gaps = 48/428 (11%) Query: 240 TRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLL----- 294 TR P P L C + + P + V++ Sbjct: 2 TRTQEPLPTVAAPKVGFISLGCPKALVDSERILTQLRAEGYEVAPNYEDAQAVIVNTCGF 61 Query: 295 --PSFEKVKGDKVLYAHAS-RILHHETNPGCARALMQKHGDRYVWINPPA--------IP 343 P+ E+ A+ +++ ++++H A Sbjct: 62 ITPAVEESLSAIGEALDATGKVIVTGCLGERPEKILERHPKVAAITGSEAVDDVMAHVRE 121 Query: 344 LSTEEMDSVFALPYKRVPHPAYGNARIPAYE---MIRFSVNIMRGCFGGCSFCSITEHEG 400 L E+D L P G+ P+ + V I GC CSFC I + G Sbjct: 122 LLPIELDPFTGLLPVAAPGMRQGDTLAPSVKLTPRHYAYVKIAEGCNHTCSFCIIPKLRG 181 Query: 401 RIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVY 460 R + SR +++ E + +IS + Y + + +E ++ Sbjct: 182 RQV-SRDAGAVLYEAYRLIAGGTKELMIIS----QDTSAYGVDLRHRTSEFQGEQV---- 232 Query: 461 PDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYL 520 I+L + ++ + + Y R ++ ++ + YL Sbjct: 233 ----------RAHLIDLAEKLGEMGA--WVRMHYVYPY---PHVERIVELMSQGKILPYL 277 Query: 521 KIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMV 580 + +H L +M +PG G + + FI PG +ED Sbjct: 278 DVPLQHASPAVLKRMRRPGAGKQLDTIRRWREICPELVIRST----FIVGFPGETEEDFQ 333 Query: 581 NLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLH 640 L +L++ R + A++ + K + + V + + +L Sbjct: 334 LLLDFLEEARLDRVGAFTYSDVEEADANALDGAIPE-EVKQERLARFMEVAQRISREKLA 392 Query: 641 KALLRYHD 648 + + R D Sbjct: 393 EKVGRVLD 400 >UniRef50_Q1DC90 Ribosomal protein S12 methylthiotransferase rimO n=6 Tax=Cystobacterineae RepID=RIMO_MYXXD Length = 476 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 100/344 (29%), Gaps = 67/344 (19%) Query: 361 PHPAYGN----ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIE 416 P P Y + RI + + I GC C+FC I G +SR D I+ E + Sbjct: 129 PDPDYIHDANTPRINSMPKYTAYLKISEGCDNACAFCIIPTLRGGQ-RSRPIDDIVAEAK 187 Query: 417 AIRDTV-PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI 475 + D+ V DL Y Sbjct: 188 QLADSGVQELNLVAQDL-----TAYGHDL------------------------PGRPKLH 218 Query: 476 NLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM 535 +L + + +K I + E + + + YL + +H + L M Sbjct: 219 DLLKALVQVD-VKWIRLHYAYPRIFPDELIEVMA--SEPKIARYLDMPVQHVSDKLLLSM 275 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 + + K L ++ + I PG +ED L ++K RF Sbjct: 276 KRGRNSEF--LKGLLTKLRERV-PGLVMRTSLIVGLPGETEEDFEMLKEFVKTQRFERLG 332 Query: 596 VQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLI 655 V + + + VP+ +RR + ++ N Sbjct: 333 VFQYSDEEGTAAYDL----------------PDKVPQKLIERR-WREVMAIQKRINREQ- 374 Query: 656 RQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALT 699 K L+G R + LV P E +++ P + Sbjct: 375 --------NKKLVGKRLEVLVEGPAPETEHLLVGRHQGQAPDID 410 >UniRef50_B2RHD7 Ribosomal protein S12 methylthiotransferase rimO n=23 Tax=Bacteria RepID=RIMO_PORG3 Length = 434 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 56/340 (16%), Positives = 107/340 (31%), Gaps = 67/340 (19%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV-PGFTGVISDLGGPT 436 + I GC CS+C+I GR +SR + ++ E+ + F + DL Sbjct: 138 AYLKISEGCDRSCSYCAIPIITGRH-RSRPMEDLVEEVRMLVKHGTREFQLIAQDLTFYG 196 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 ++Y L R D+KG++ + + Sbjct: 197 LDLYGA-----------------------------NRLAELTARLSDIKGVEWLRLHYAY 227 Query: 497 RYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTYSK 555 ++ ++E +V YL +A +H + L +M + E T Sbjct: 228 PAQFPLDLLPVMRE--RPNVCKYLDMALQHISDPMLRRMRRRITKAETYELIERIRTEVP 285 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 +L ++ HPG + D L +++ RF + Y K Sbjct: 286 GI----HLRTTLMTGHPGETERDFEELLQFVRDIRFERLGAFTYSHESGT------YCDK 335 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 N +P+ KQ RL + + +++ + A + IGSR + Sbjct: 336 N---------YQDDIPESVKQERLGELMA----------VQERISAAHNEAKIGSRLRVV 376 Query: 676 VPAPTIEEMREARRQNRNTRPALTKHTPM--ATQRQTPAT 713 + E+ R ++ + + Q P Sbjct: 377 ID--RAEDGFYVGRTEYDSPEVDPEVLIPFVSGQELKPGR 414 >UniRef50_Q24W37 Ribosomal protein S12 methylthiotransferase rimO n=4 Tax=Clostridiales RepID=RIMO_DESHY Length = 445 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 60/324 (18%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 R+ V + GC C++C I G +SR+++SI+ E+EA+ Sbjct: 141 PRVRLSPKQYAYVKVAEGCDNYCTYCIIPHVRG-HFRSRTQESILREVEAMASEGVKEVL 199 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 +I Y +L + ++GI Sbjct: 200 LI----AQDTTRYGKD------------------------RYGEYRLPSLIKEIARIEGI 231 Query: 488 KKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFK 547 + I + E +KE T V YL + +H + L++M + G + + Sbjct: 232 EWIRLMYCYPELFTDELITVMKE--TPKVCRYLDLPLQHAHDKVLAEMNRRG--TIREAE 287 Query: 548 ELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANS 607 L ++ + L I+ PG +E+ + + KK RF + + Sbjct: 288 GLIHKLRQEI-PDIRLRTTMITGFPGETEEEFQAVVEFAKKIRFDRLGAFAYSQEESTPA 346 Query: 608 TTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHL 667 + VP+ +Q+R + + HD A ++ Sbjct: 347 AQ----------------REDQVPEEIRQQRRDQLMELQHDIAYEQ----------QQRW 380 Query: 668 IGSRRDCLVPAPTIEEMREARRQN 691 +G L+ ++ R + Sbjct: 381 VGQTLKVLIEEALPDQRWVGRSEG 404 >UniRef50_Q73JG6 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Treponema denticola RepID=RIMO_TREDE Length = 467 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 97/306 (31%), Gaps = 45/306 (14%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEA-IRDTVPGFTGVISDLGGPT 436 + I GC CSFC+I GR ++SR I +EI+ ++ + F + DL Sbjct: 145 TYIKITEGCDNFCSFCAIPIIRGR-LRSRPIKDICDEIKTFLKKSFYEFNLIGQDLAAYQ 203 Query: 437 ANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGV 496 K +E R +C L + +KG KI + Sbjct: 204 T------GKDDLSEDELHRENC-------------SGLALLLKSISKIKGNFKIRL---- 240 Query: 497 RYDIAVEDPRYIKELATHHVGG-----YLKIAPEHTEEGPLSKMMKPGMGS-----YDRF 546 + + + ++ Y I + + + M + G Sbjct: 241 ---LYIHPDHFPLDILPIMTADKRFLPYFDIPFQSGAQKIIRAMNRNGAAEVYLDIIKNI 297 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 +E F+ + G+ Q + F+ PG DED +LK+ R + Sbjct: 298 REAFEKTNSPYGEPQ-IRTTFLVGFPGETDEDFNETIKFLKELRPLWSGGFTYSREEDTP 356 Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 S + + GK P + ++ + + + + ++ + L K Sbjct: 357 SYS--FKGKVPKKTAEARLAEIQNAQTSITEKKLDSFI----GKEIEVLVEELIQAEDKT 410 Query: 667 LIGSRR 672 + R Sbjct: 411 FLALGR 416 >UniRef50_A8RDC7 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RDC7_9FIRM Length = 433 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 64/468 (13%), Positives = 127/468 (27%), Gaps = 80/468 (17%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKV-LYAHASRILHHE 317 L C+ N + K P + +++ + + K A ++ ++ Sbjct: 8 LGCSKNLVDSEKMMGMLVSGQHELVSDPAQAEAIIINTCGFINSAKEEAIATIFKMAEYK 67 Query: 318 TNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHP----AYGNARIPAY 373 + ++ RY IP E+D+V ++ H + +Y Sbjct: 68 KDKCKRLIVVGCLAQRYKETLEEEIP----EIDAVISIREYPHLHEILKELLDEHDLVSY 123 Query: 374 E---------MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 + + I GC C++C+I G + S + ++ E + + Sbjct: 124 DKCERKVSSRPWTAYLKIAEGCSNRCTYCAIPLIRGDNV-SFPMEDLVKEAKQLAQRGVK 182 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 +I Y L + + ++ Sbjct: 183 ELVLI----AQDTTKYGLDRYGKLSLLELLKQL------------------------HEI 214 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSY 543 +G I I +I E + L V Y I +H L M + Sbjct: 215 EGFHWIRILYMYPDEIEDELIEGMARL--PKVLPYFDIPMQHANNRMLKAMNRRGTKEEV 272 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 R E + L FI P + L ++ + + P Sbjct: 273 LRLCEKIRNTFEN----PTLRTTFIVGFPSETHDHFNELMEFVNDVHWDRMGAFPYSPEE 328 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 + M V + +KQRRL + +LR ++ + Sbjct: 329 DTPAFDMEQ----------------DVSEEEKQRRLEQLMLR----------QEEISLQN 362 Query: 664 KKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTP 711 ++ +IG + LV R + + + R P Sbjct: 363 QQKMIGQVIEVLVEDQEGLSGLYRGRGKSSAPDEVDGIVIFKSDRFIP 410 >UniRef50_Q6MAB2 Putative 2-methylthioadenine synthetase n=2 Tax=Parachlamydiaceae RepID=Q6MAB2_PARUW Length = 434 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 93/314 (29%), Gaps = 37/314 (11%) Query: 347 EEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSR 406 E + + A + + P + + ++ R + + GC C++C I GR +SR Sbjct: 104 REKEQLLARLFPKENLPEFSITQFDSHT--RAFIKVQDGCNSFCTYCIIPYVRGRS-RSR 160 Query: 407 SEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPH 466 S + ++ E +A+ I G + K Sbjct: 161 SVEEVLEEAKALISNGYKE---IVLTGINIGDFDGKVAKGE------------------- 198 Query: 467 MDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELAT-HHVGGYLKIAPE 525 L R L G++++ ++S D D + H + I + Sbjct: 199 ---TPVRLSELVRMVDQLPGLERLRLSS---IDPDEVDDELSDAILNGKHTCHSMHIVLQ 252 Query: 526 HTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALW 585 L +M + F + D + I PG D D + Sbjct: 253 SGSNVILKRMNRKYTRQI--FLDTIDKLKAAHS-DFTFTTDIIVGFPGETDLDFQDTIEV 309 Query: 586 LKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 +K +F + + P S M +P K E + V + + L + L Sbjct: 310 MKHVKFAKVHMFPYSDRPRTRSNLMPNK-VSPEMIRMRKQEILRVAEQTAYK-LREGYLN 367 Query: 646 YHDPANWPLIRQAL 659 I +A Sbjct: 368 RRMKILTESIDEAR 381 >UniRef50_A6DI62 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DI62_9BACT Length = 469 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 96/309 (31%), Gaps = 52/309 (16%) Query: 339 PPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEH 398 ++T + D + Y R+ + I GC CSFC+I Sbjct: 121 RKMPTMNTIQKDDLPVYLYDE------NTPRLLVTPSHYAYIKISEGCNHKCSFCAIPTF 174 Query: 399 EGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSC 458 G+ ++SR+ +SI+ E +A+ + ++S + Y K Sbjct: 175 RGK-LRSRTIESIVKEAQALLNRGVREIILVS----QDSTGYGSDLK------------- 216 Query: 459 VYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELAT----- 513 + T L + L VR + + EL Sbjct: 217 -----------DGSSTAELLKALDKLD-----CDEYWVRL-LYLYPTTVTDELIETFAQS 259 Query: 514 HHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHP 572 H+ Y+ + +H + L M + + + F A + + HP Sbjct: 260 KHIAKYIDMPLQHGADKVLKTMRRGITRKRTEILLDKFRK----AMPGVVMRTTLLVGHP 315 Query: 573 GTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPK 632 G +E+ ++K+ +F V + ++ ++ +P + + + V + Sbjct: 316 GEGEEEFQECLDFVKEQQFDRLGVFTYSHEENTHARSLE-DFTDPETSAARRDQIMAVQQ 374 Query: 633 GDKQRRLHK 641 + + Sbjct: 375 EISYEKNQR 383 >UniRef50_D0RQJ6 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQJ6_9RICK Length = 435 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 69/237 (29%), Gaps = 39/237 (16%) Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 I V I GC C FC + G SR + I++EI ++ D L G Sbjct: 148 KISSFVTIQEGCDKFCKFCVVPYTRGPEF-SRDHNKILDEILSLTDNGTKEIV----LLG 202 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 + Y N L ++ + +K+I + Sbjct: 203 QNVSAY---------------------------KNNDISLARLIKKIAKINNVKRIRFTT 235 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTY 553 D E E + L + + + L M + Y E F Sbjct: 236 SHPNDFDQELISLFGE--EPKLMPQLHLPVQSGSDKILKLMNRNHTRSDYLNLIEKFRKE 293 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 FI PG +ED ++ +K+ +F L + P +T + Sbjct: 294 KSDI----QFSSDFIVGFPGETNEDHLDTINLVKEVKFSLSYSFIYSQRPGTPATNL 346 >UniRef50_C1SNN4 SSU ribosomal protein S12P methylthiotransferase n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNN4_9BACT Length = 435 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 90/276 (32%), Gaps = 45/276 (16%) Query: 360 VPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIR 419 P YG+ARI A E + + GC CS+C+I G ++ SR + I+ E E++ Sbjct: 118 SAVPDYGDARILANEHYFAYLKVSEGCDNRCSYCAIPGIRGGLV-SRKMEDIVKEAESLV 176 Query: 420 DTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYR 479 D VIS Y + L + Sbjct: 177 DGGVKELIVIS----QDNTKYGKDIYGKPS------------------------MPELLK 208 Query: 480 RARDLKGIKKILIASGVRYDIAVEDPRYIKELA-----THHVGGYLKIAPEHTEEGPLSK 534 + ++G KI I + + +EL + + Y I +H + L Sbjct: 209 KLEGIEGDFKIRI-------MYLNPDGVTQELIDVICGSKKILSYFDIPVQHYSDKMLKA 261 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M + S + ++A E ++ I PG + D L +L +H+ Sbjct: 262 MKRKSDSS---IIDDVYDSIRKADPESFIRTTMIVGFPGETEGDFAELEKFLTRHKPDFA 318 Query: 595 QVQNFYPSPLANSTTM-YYTGKNPLAKIGYKSEDVF 629 +Y ++ + GK + + + Sbjct: 319 GFFPYYREKGTSAYELGASVGKRETNRRIRALQKIQ 354 >UniRef50_Q1QA11 Ribosomal protein S12 methylthiotransferase rimO n=232 Tax=cellular organisms RepID=RIMO_PSYCK Length = 531 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 61/332 (18%), Positives = 101/332 (30%), Gaps = 53/332 (15%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 A I + I GC C+FC I G ++ SR DS++NE A++ Sbjct: 216 NEAGIKLTPSHYAYLKISEGCNHRCTFCIIPSLRGDLV-SRPIDSVMNEALALKKAGVKE 274 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 +IS + Y L K Y + +L + DL Sbjct: 275 LLIIS----QDTSAYGLDLK--------------YKTSFWNGMPLKSKFYDLCQALNDL- 315 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDR 545 GI + + Y + + E + YL I +H L M +P + Sbjct: 316 GI-WVRLHYVYPYPHVDKVVELMGE---KKLLPYLDIPFQHASHRILKAMKRPAHS--EN 369 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 + ++ + + F+ PG +ED L WL + R + A Sbjct: 370 TLARIHAW-REICPDIVIRSTFVVGFPGETEEDFQCLLDWLVEARLDRVGAFTYSEVEGA 428 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKK 665 + + VP+ KQ R + + ++Q + A + Sbjct: 429 VANDL----------------PNHVPEDVKQERYERLMT----------LQQDISAQKLQ 462 Query: 666 HLIGSRRDCLVPAPTIEEMREARRQNRNTRPA 697 IG LV EE R + Sbjct: 463 EKIGKTLMVLVDEIDREEGVAICRSYADAPEI 494 >UniRef50_B5YKD1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RIMO_THEYD Length = 425 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 87/273 (31%), Gaps = 39/273 (14%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIR-DTVPGFTGVISDLGGPTA 437 + I GC CSFC I + G +S + + I+ E+E + F V D+ Sbjct: 135 YIKIAEGCSRRCSFCIIPDVRG-PFRSLNPEEILKEVENFVHSGIKEFILVAQDITQ--- 190 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 Y K L + +KG I + Sbjct: 191 --YGKDLK-------------------------GYTLKRLLKDLCSIKGDFWIRLLYLYP 223 Query: 498 YDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQA 557 DI I + + YL I +H+EE L M + G + + + Sbjct: 224 SDIDENLIETIAD--EEKIVKYLDIPMQHSEERILRLMGRRGTK--KEYLKKIKQIRQAI 279 Query: 558 GKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNP 617 E L FI P +E+ L ++++ +F V + + ++ G+ P Sbjct: 280 -PEVTLRSTFIVGFPTETEEEFQRLVDFIEEVQFDRLGVFKYSKEEGTKAYSL--KGQIP 336 Query: 618 LAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPA 650 + ++ + ++AL+ A Sbjct: 337 ENVKNRRYNEIMARQAVISLEKNRALIGKKYEA 369 >UniRef50_D1BMG0 MiaB-like tRNA modifying enzyme n=3 Tax=Veillonella RepID=D1BMG0_VEIPT Length = 431 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 85/268 (31%), Gaps = 38/268 (14%) Query: 359 RVPHPAYGNARIPAY----EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 R +P + + R + I GC C+FC I G+ ++SR D I+ E Sbjct: 123 RDIMKESNFEEMPLFGNESDKTRAFMKIQEGCNNYCAFCIIPYTRGK-LKSRKVDDIVQE 181 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 + + D GF ++ L G Y + Sbjct: 182 AKRLVDH--GFHEIV--LTGIHLGNYGVEL------------------------PGRPTL 213 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 ++ + ++ + +I S +++ E + V +L + + + L Sbjct: 214 ADVVKALLEIPNLYRIRFGSIESVEVSDELVELMA--TNKRVCPHLHLPLQAGSDHVLKL 271 Query: 535 MMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLD 594 M + + +K+L + + K+ + I+ P DED +++ F Sbjct: 272 MKRH--YTLQEYKDLITSLRSRI-KDLSITTDIIAGFPQETDEDFEETLNTVREIGFTHI 328 Query: 595 QVQNFYPSPLANSTTMYYTGKNPLAKIG 622 + + TM + K Sbjct: 329 HAFPYSIREGTPAATMADQVPEAVKKTR 356 >UniRef50_C1A7K6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7K6_GEMAT Length = 473 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 96/290 (33%), Gaps = 50/290 (17%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAI-RDTVPGFTGVISDLGGPTA 437 + I GC GC+FC+I G+ +S + D ++ E + + V DL Sbjct: 141 YLKISEGCDHGCAFCAIPLMRGKH-RSFALDELVREAQLLEVQGAREINLVAQDLA---- 195 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVR 497 Y + + R + I+ + + S Sbjct: 196 -HYGRDRRDGHGL---------------------PELLEALVRETSIPWIRNMYLYS--- 230 Query: 498 YDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ 556 PR ++ +A H + YL +H + L++M +P +E Y + Sbjct: 231 ---TGITPRLLEVIAAHPRIVRYLDTPMQHGSDAVLTRMRRP--ERQKTIRERLARY-RD 284 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 + + I PG ++D L +L++ +F V + P + M Sbjct: 285 IVPDLAVRTSVIVGFPGETEDDFNILCDFLEEMQFDRVGVFTYSPQEGTRAHAM------ 338 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 ++ + + ++ L +A+ + L R+A + ++ Sbjct: 339 ----EDDVADSIKQERKERIEELQRAITA--ERYERFLGREARVLVERRG 382 >UniRef50_A6FYG6 tRNA-i(6)A37 thiotransferase enzyme MiaB n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FYG6_9DELT Length = 486 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 48/335 (14%), Positives = 95/335 (28%), Gaps = 62/335 (18%) Query: 356 PYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEI 415 P R P A + + V I RGC C+FC + GR + ++ + Sbjct: 172 PVIRSPGDDGSEAATSRDDGVSGYVTIQRGCDKFCTFCVVPFTRGRE-RGVPPREVLRQA 230 Query: 416 EAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTI 475 + + L G T N Y Sbjct: 231 RRLAEAGYREL----TLLGQTVNSYA---------------------------WEDVSFA 259 Query: 476 NLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM 535 L R ++GI++I S D + E + V Y+ + + + L +M Sbjct: 260 ELLRAVAAVEGIERIRFTSPYPVDFSDELIEVLA--TEPKVCPYVHMPVQAGADVVLERM 317 Query: 536 MKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQ 595 + + ++EL + A + + G + D +++ +F Sbjct: 318 RR--GYTLADYRELVRKL-RAAVPHIAISTDIMVGFCGETEADHAETLALMEEVQFDFAF 374 Query: 596 VQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLI 655 + + + ++ VP+ K RRL + + + Sbjct: 375 MFAYSDREITYASKKLVDD---------------VPQETKLRRLREVI----------EL 409 Query: 656 RQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQ 690 ++ +G R LV + + R Sbjct: 410 QEKHTRARLAARVGQRDRVLVVNTSKRGDKLLGRT 444 >UniRef50_A6LBP0 Fe-S oxidoreductase n=4 Tax=Bacteroidales RepID=A6LBP0_PARD8 Length = 485 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 64/405 (15%), Positives = 111/405 (27%), Gaps = 65/405 (16%) Query: 216 EIRDVRNTAIIVKEALPGWSGVD----STRLDTPGKIDPIPHPYGEDLPCADNKPVAPKK 271 D + +++L D LDT + L Sbjct: 53 SFLDAPAKQLNEEQSLNIIRKTDNEHSLFVLDTSTPSIKSDVAFAGKLKALYPHSFVVLV 112 Query: 272 QEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHG 331 + + V + ++ + + +L + R L G Sbjct: 113 GTHPSACAEETLGYSNAVDAVAIGEYDCIVN------ELANVLDAGKDLREVRGLCFWDG 166 Query: 332 DRYVWINPPAIPLSTEEMDSVFALPYKRV---PHPAYGNARIPAYEMIRFSVNIMRGCFG 388 +V P P+ + +D LP+ H + A + RGC Sbjct: 167 KEFVRTA-PMPPM--KNLD---DLPFASQFIKEHLNERDYFFAAATYPSIQIFTGRGCPF 220 Query: 389 GCSFCSITE-HEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 C+FC + G ++RS ++++ E E I P V+ + TAN Sbjct: 221 RCNFCVYPQTMHGHAFRARSAENVVAEFEYIAANFPDVKEVVIEDDTFTAN--------- 271 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 + +++ R + K K++ R D+ +E Sbjct: 272 -----------------------KKRVLDICRLLVEKKLNKRLKWLCNARVDLDLETM-- 306 Query: 508 IKELATHHVGGYLKIA-PEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLI-P 565 LA G L I E + L + K Y F Y A K LI Sbjct: 307 ---LAMKKAGCRLIIPGIESGSQQILDNIKKGTKVEY------FYQYVANAKKAGLLIHA 357 Query: 566 YFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 ++ + G E M + Q P P + Sbjct: 358 CYMVGNQGETRETMEETLRLALRLNTDTAQFFPLIPYPGTEAYQW 402 >UniRef50_C0R0S3 MiaB, 2-methylthioadenine synthetase n=2 Tax=Brachyspira RepID=C0R0S3_BRAHW Length = 440 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 56/413 (13%), Positives = 113/413 (27%), Gaps = 59/413 (14%) Query: 253 HPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASR 312 + Y L C N P + +++ + ++ K A Sbjct: 3 NIYLHSLGCEKNTVDGEHILAILQKKGFNITNNPEDADIIVINTCAFIEDSKKESIDAIF 62 Query: 313 ILHHETNPGCARALM------QKHGDRYVWINPPAIP----------LSTEEMDSVFALP 356 G + L+ +++ + ++ + L E D Sbjct: 63 DHSMYKKYGKCKRLIVSGCMSERYKENFLEMFKEVDSAIGIYDLENILKAVEEDGFHD-- 120 Query: 357 YKRVPHPAYGNARIPAYEMIRFS--VNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 + Y ++S + I GC CSFC+I G +SR + I+ E Sbjct: 121 --AKENTEYKEYGDRVNTGTKYSVYIRISDGCHANCSFCAIPGIRGEH-RSRKIEDIVKE 177 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPT 474 E +I Y A Sbjct: 178 AENYAKNGAKEINLI----AQETTFYGYDIYKKLA------------------------L 209 Query: 475 INLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSK 534 +L + ++GI+ I + + E T V Y I +H ++ L Sbjct: 210 PDLLKALSKVEGIEWIRVLYQNPVVLNDEIIESF--FNTEKVVPYFDIPLQHVDKDILKD 267 Query: 535 MMKPGMGS--YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFR 592 M + Y + +Y+ A + I PG E L +++ + Sbjct: 268 MNRGTRSYKFYREMIDKIRSYNNDA----VIRTSLIVGFPGETAESFKKLIKFVRNAKLD 323 Query: 593 LDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 V + + + + K+ + + + ++RL + + R Sbjct: 324 RVGVFTYSEEENTKALLINKPKMSRNKKLILREKLMRAAIEVSEKRLERFIGR 376 >UniRef50_C2D6E2 Possible 2-methylthioadenine synthetase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6E2_9ACTN Length = 504 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 86/268 (32%), Gaps = 30/268 (11%) Query: 361 PHPAY---GNARIPAYEMIR---FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINE 414 HP + A I V I GC C+FC+I G SR + I +E Sbjct: 154 EHPTFSFSQELSARALRTIEGTSAFVKISEGCDRYCAFCAIPFIRG-HYASRCPEEIFSE 212 Query: 415 IEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVY-PDICPHMDTNHE- 472 I + + +I G ++ S A + S ++ P D N Sbjct: 213 ITMLMEGGVKEIILI----GQDTGIWGEDFSSRGAASVLHKDSDLHDPSSASSFDKNSTQ 268 Query: 473 ----PTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELA-----THHVGGYLKIA 523 L R + K I + ++ ++L T V Y+ I Sbjct: 269 HESMNLAWLLREVARIVRPYKAWIRV-----LYLQPEGMTEDLIATIRDTPEVLPYIDIP 323 Query: 524 PEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLA 583 +H E L KM + G S + +LF + + L + P DE+ L Sbjct: 324 IQHCNERLLKKMGRSGSAS--QLHKLFAHLRHEI-PQMVLRTTGMVGFPTETDEEAAELV 380 Query: 584 LWLKKHRFRLDQVQNFYPSPLANSTTMY 611 + K+ F V ++ + M Sbjct: 381 DFFKQEEFDYMSVFSYSQELGTTAAKMR 408 >UniRef50_C9RLB8 RNA modification enzyme, MiaB family n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RLB8_FIBSS Length = 440 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 87/309 (28%), Gaps = 43/309 (13%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 Y + V I RGC CS+C + G + R D ++ E++ D Sbjct: 136 ENYLGEYAKLQNDVSAFVAIQRGCNKRCSYCIVPYLRGPE-KYRDMDDVLTEVKRAADKG 194 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 L G T N Y T + L + Sbjct: 195 ITEVM----LLGQTVNAY---------------------------KTPNADFTTLLTKVS 223 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGS 542 ++ GIK+I S E + L V Y I + + L KM + + Sbjct: 224 EIGGIKRIRFTSPHPRHYTNELIDVL--LNNPKVCHYAHIPLQSGSDAILKKMRR--QHN 279 Query: 543 YDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPS 602 +++ + + + + I G DED + +F + + P Sbjct: 280 MEQYMTVIEQLRSK-DPYYAISTDVICGFVGETDEDFEQTIKAFEACQFDTAYMFIYSPR 338 Query: 603 PLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 S P K S V + +R + R ++ + Sbjct: 339 KGTESFN-EAEILTPEEKSARHSRLVELQNAITLKRNQMMIGR-----TEEILVEHGSTR 392 Query: 663 GKKHLIGSR 671 K L+G Sbjct: 393 DKTELVGKT 401 >UniRef50_C8WHJ1 RNA modification enzyme, MiaB family n=5 Tax=Coriobacteriaceae RepID=C8WHJ1_EGGLE Length = 459 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 94/358 (26%), Gaps = 51/358 (14%) Query: 343 PLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRI 402 E +D+ + P + I GC CS+C + GR Sbjct: 131 SHQVEVLDAASSFP---------TELPTAREHEWAAWLPITIGCNNFCSYCIVPYVRGRE 181 Query: 403 IQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPD 462 +SR + I+ E E L G N Y Sbjct: 182 -KSRPLEDIVAEAERYVAAGVKEI----TLLGQNVNSYGRDLYGS--------------- 221 Query: 463 ICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKI 522 + GI+++ A+ D+ E L + L + Sbjct: 222 ---------PRFAQVLDALDQT-GIERLRFATSHPKDLNDEVVGRFATLRSLM--PALHL 269 Query: 523 APEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNL 582 + + L+ M + + D ++ L + A + L I PG +D + Sbjct: 270 PVQSGSDAVLAAMNR--RYTRDHYRALVAKL-RDAVPDIALSTDIIVGFPGETAKDFEDT 326 Query: 583 ALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKA 642 + + + + + +M + + V + + + Sbjct: 327 YRLVDEVGYHQVFTFIYSKREGTPAASMDDDTPREVIQ-QRFDRLVDLVQQRAFEANQRD 385 Query: 643 LLRYHDPANWPLIRQALEAMGKKHLIGSRRD-CLVPAPTIEEMREARRQNRNTRPALT 699 L + ++ + ++ L G V AP +R R + Sbjct: 386 L-----GSTVDVLVEGASKRDERLLAGKSPKNQTVHAPAPAGVRAEDLAGSTVRVRVD 438 >UniRef50_C1F6H1 RNA modification enzyme, MiaB-family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6H1_ACIC5 Length = 512 Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 96/328 (29%), Gaps = 62/328 (18%) Query: 365 YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 + R+ A + I GC CSFC I G+ +SR +S++ E +++ Sbjct: 186 HTTPRLRATRSASAYIKIAEGCDHPCSFCVIPNLRGK-FRSRRFESVVAEAQSLVAQGVR 244 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 +I G Y L R + Sbjct: 245 EITLI----GQDTTCYGEDLGLKDG------------------------LALLLERLAQI 276 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKMMKPGMGSY 543 +G+ + I + + +A H ++ YL + +H L M + Sbjct: 277 EGLLWLRFLYAYPNKITG---KLLDTIAKHDNICKYLDVPLQHASGAVLKSMKRGANAEI 333 Query: 544 DRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSP 603 + + + L FI PG ED L +++ + V + Sbjct: 334 --LLKTIEKARARV-PGLVLRTSFIVGFPGETAEDFATLQQFVRDAQIDWLGVFTYSDEE 390 Query: 604 LANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMG 663 + + + GK P I ++R L K +Q + Sbjct: 391 GSKAFDL--EGKLPRRTIEQ-----------RKRALMKQ-------------QQGISRRA 424 Query: 664 KKHLIGSRRDCLVPAPTIEEMREARRQN 691 K+ +G D LV + E + + Sbjct: 425 KQQWVGRVVDVLVEGESEETPLLWQGRT 452 >UniRef50_D1Y2L7 Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2L7_9BACT Length = 434 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 46/342 (13%), Positives = 103/342 (30%), Gaps = 63/342 (18%) Query: 379 SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTAN 438 + I GC CS+C+I GR ++S + I+ E + D ++ G + Sbjct: 138 YLKISEGCNSRCSYCAIPGIRGR-LRSVPVEQIVGEARRLVDEGAKELCLV----GQELS 192 Query: 439 MYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRA-RDLKGIKKILIASGVR 497 +Y L ++L + + Sbjct: 193 IYGSDL------------------------FGRPSLPRLLDELEKELPRGVWLRLFYLHP 228 Query: 498 YDIAVEDPRYIKELATHHVG-GYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQ 556 ++ D +++ +A V +L I +H ++ L +M +P + +ELF ++ Sbjct: 229 ---SLVDAVFLERVAASPVILPWLDIPIQHVDDDVLRRMNRPPVE--RHIRELFAR-GRE 282 Query: 557 AGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKN 616 + + PG L ++++ F + P + + Sbjct: 283 INPDFAFRTTLMVGFPGETRAQFDKLLDFVEEIGFDRLGAFPYSPEDGTPAASF------ 336 Query: 617 PLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLV 676 +P+ +K R ++ + +++ + + H +G + L+ Sbjct: 337 ----------PDQIPEEEKTARYNELM----------ELQRQVSLTRQAHFVGHELNVLI 376 Query: 677 PAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKAS 718 E R R+ T R P + Sbjct: 377 DEVDEETGERVGRSFRDAPEIDGVVTVTGAGRARPGDMIRVK 418 >UniRef50_A4SAH0 Predicted protein n=3 Tax=Mamiellales RepID=A4SAH0_OSTLU Length = 579 Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 109/363 (30%), Gaps = 37/363 (10%) Query: 378 FSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTA 437 V IMRGC C+FC + GR +SR SI+ EI + + ++ LG A Sbjct: 217 AFVTIMRGCDNACAFCIVPYTRGRE-RSRDLASIMYEIRLLSEQGVKE---VTLLGQNLA 272 Query: 438 NMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHE-PTINLYRRARDLKGIKKILIASGV 496 N R S P L + + +I S Sbjct: 273 NASTERLASASGSAFVGYADGFASRYDPERKRAGTIQFAELLDKVASVDPEMRIRFTSPH 332 Query: 497 RYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFDTYSK 555 D + R I++ +V L + + L +M + SY + Sbjct: 333 PKDFPDDVLRVIRD--RPNVSKCLHMPAQSGSSATLERMARGYTRESYFALIDRVKAMIP 390 Query: 556 QAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGK 615 + IS G ++D + + + + + Sbjct: 391 GCA----ITTDIISGFCGETEDDHEDTVSLMSAIGYEQAFMFAYSEREGTAG-------- 438 Query: 616 NPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCL 675 + + VP+ KQRRL + + + A ++ IGS L Sbjct: 439 -------QRHQIDDVPEDVKQRRLQEVIDAFRARAAEK----------QQMEIGSTHCVL 481 Query: 676 VPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKA 735 V P+ + E + ++ + + + A + S +P + A + Sbjct: 482 VEGPSKKNSDEWTGKTDTSKWVVFEKNDAIGKYAGDEDAPTSGSYGVKPGDYVAVRVTGC 541 Query: 736 AVG 738 + G Sbjct: 542 STG 544 >UniRef50_A2SQZ8 MiaB-like tRNA modifying enzyme n=1 Tax=Methanocorpusculum labreanum Z RepID=A2SQZ8_METLZ Length = 416 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 58/391 (14%), Positives = 112/391 (28%), Gaps = 51/391 (13%) Query: 255 YGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRIL 314 Y E C N K E P E +L+ + V DK R+ Sbjct: 18 YTETYGCTYNAGDTEKLMEIARNQGCVPASSAEEADAILINTC--VVIDKTEQHMYERLD 75 Query: 315 HHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYE 374 + + + P I + + H Y A+ Sbjct: 76 LYAGKLLFVTGCLPPVAADVLRTRYPKIHIIDPAL-----------IHSCYMEVG-TAHV 123 Query: 375 MIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGG 434 + I RGC G C++C G+++ S S + I+ + ++I + L Sbjct: 124 GTNAVLQIARGCNGHCTYCITRLARGKLV-SFSAEDIVRQAKSIVEAGATEI----QLTA 178 Query: 435 PTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIAS 494 + + L + +L R+ + G I I Sbjct: 179 QDTSSWGLD------------------------RNDGLRLPDLLRQLCAIPGNFMIRIGM 214 Query: 495 GVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKM-MKPGMGSYDRFKELFDTY 553 + ++ L + +L I + + L M + Y+ + Sbjct: 215 ANPDTLLPILDDFLDALKDPKIFLFLHIPVQSGSDSVLRLMGRRYTSAQYEEICQRARKA 274 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 + + +I+ G DED A +++ R + F P + M Sbjct: 275 FPEIR----ISTDYIAGFSGETDEDAAKSAEQIRRTRPGKVNITRFSVRPNTPAAKM--- 327 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALL 644 K P +S ++ + ++AL+ Sbjct: 328 KKIPEPIKKQRSRELTDAANEVYDANNEALI 358 >UniRef50_Q3ZYS0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=5 Tax=Dehalococcoides RepID=MIAB_DEHSC Length = 418 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 67/434 (15%), Positives = 138/434 (31%), Gaps = 53/434 (12%) Query: 251 IPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSF---EKVKGDKVLY 307 +P Y + C N+ + + + K + VL+ S E + V Sbjct: 1 MPGYYLWTIGCQMNQAESDRLGRLFELWGYSLADKAEDAELVLVNSCVVREHAENKVVNR 60 Query: 308 AHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVF---ALPYKRVPHPA 364 H R L NP AL + + + P +D +F ++P R Sbjct: 61 LHLLRSL-KNKNPKLKIALTGCLVGQDISLIKKKFPF----VDYIFGPGSMPDWREIPEG 115 Query: 365 YGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPG 424 + P + +V IM+GC C++C + GR +SRS I E+ + Sbjct: 116 FILPLRP---PVSANVTIMQGCNNFCTYCVVPYRRGRE-KSRSIAEIGCEVAELVRRGSR 171 Query: 425 FTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDL 484 L G + Y + C +L D+ Sbjct: 172 EVV----LLGQNVDSYGHD---------------LPEKPC---------LADLLSALHDI 203 Query: 485 KGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYD 544 G+ +I + DI+ + + L V L + + ++ L+ M + + Sbjct: 204 TGLLRIRFLTSHPKDISQKLIDAMAHL--PKVCRSLSLPVQSGDDTILASMRRG--YTNQ 259 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 +++EL + K A + L I P +E + + V + P P Sbjct: 260 QYRELVERI-KTAMPDISLQTDLIVGFPSENEEQFNQSYKLMADIGYDAIHVAAYSPRPQ 318 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGK 664 + P+ + + + + + + + + AL+ ++ + L+ Sbjct: 319 TVAARDM-ADDVPVIEKKRRLKLIEDLQKETVGKANAALMDTF----AEVLVEGLQKNKW 373 Query: 665 KHLIGSRRDCLVPA 678 + + + + Sbjct: 374 QGRTLGGKLVFLES 387 >UniRef50_D2AXY5 RNA modification enzyme, MiaB-family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AXY5_STRRD Length = 469 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 61/388 (15%), Positives = 117/388 (30%), Gaps = 85/388 (21%) Query: 335 VWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAY--------------------- 373 V P +P S D LP V A A IP + Sbjct: 112 VLEGKPLVPHSPR--DRRTLLPISPVERAAAPKANIPGHGELPDGLAPASGPRPLRKRLG 169 Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + S+ + GC C+FC+I G + SRS + +++E + ++S+ Sbjct: 170 DGPVASLKLASGCDRRCTFCAIPAFRGAYV-SRSPEELVSEAAWLAGQGVKELVLVSE-- 226 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 + Y RA L +GI+++ ++ Sbjct: 227 --NSTSYGKDLGDLRA------------------------LEKLLPSLAATEGIERVRVS 260 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGM-GSYDRFKELFDT 552 ++ I +T V Y ++ +H L +M + G + E Sbjct: 261 YLQPAELRPGLLEMIA--STESVAPYFDLSFQHASGSVLRRMRRFGDPRRFLDLLESVRA 318 Query: 553 YSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYY 612 + +AG FI PG +E+ L +L++ R + V + + ++ Sbjct: 319 TAPEAGVRS----NFIVGFPGETEEEFAELTAFLQEARLDVIGVFGYSDEDGTEAASL-- 372 Query: 613 TGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 + + R+ A + + L A + IG+ Sbjct: 373 --------------PGKLDQETVDARV----------AALTELAEELMAQRAEERIGTEV 408 Query: 673 DCLVPAPTIEEMREARRQNRNTRPALTK 700 D L+ + E R ++ + Sbjct: 409 DVLIEEDLGDGGYEGRAAHQGPEVDGSV 436 >UniRef50_Q2RZF8 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=12 Tax=Bacteroidetes RepID=MIAB_SALRD Length = 503 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 67/510 (13%), Positives = 143/510 (28%), Gaps = 79/510 (15%) Query: 212 EPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKK 271 EPI ++ + + +EA Y E C N + Sbjct: 2 EPIEDLDVLAEDEVRQREADGEVDEDLDRVKHGYDATAGDKQVYIETYGCQMNVNDSGIV 61 Query: 272 QEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCAR------- 324 + VLL + + + +L E Sbjct: 62 ASVLEESGYGLTRDQAAADVVLLNTCAIRENAERKIRARLSMLRSEKEKRDGELMLGVLG 121 Query: 325 --------ALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMI 376 L+++ V + P A + + A V + + Sbjct: 122 CMAERLREKLLEQEDLVDVVVGPDAYRDLPQLLYEADATGQAAVNVELSKQETYEDIQPV 181 Query: 377 RF-------SVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVI 429 R+ V+IMRGC C+FC + GR +SR +I++E+ + + Sbjct: 182 RYDSNGVSAYVSIMRGCDNMCTFCVVPFTRGRE-ESRPVTTILSEVARLAEEGYKEV--- 237 Query: 430 SDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKK 489 L G N Y + L R + + Sbjct: 238 -TLLGQNVNSYHYTDADGTSVS----------------------FAELVDRVSRVSPEMR 274 Query: 490 ILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKEL 549 + ++ D + + ++ +V Y+ + +H L +M + + + + L Sbjct: 275 VRYSTSHPKDCTDDLLKVHRD--RPNVCNYIHLPVQHGNTEVLDRMRR--TYTREEYLAL 330 Query: 550 FDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTT 609 + +K+ L I+ G + + +++ R+ + + P + Sbjct: 331 TER-AKELCPGVSLSTDLIAGFCGETEAQHEDTLSLMEEVRYDHAYMFKYSERPQTYAAR 389 Query: 610 MYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIG 669 Y + VP+ KQRRL + + ++ + +G Sbjct: 390 KY---------------EDDVPEDTKQRRLEEII----------ELQNQHAKESNEAEVG 424 Query: 670 SRRDCLVPAPTIEEMREARRQNRNTRPALT 699 LV P+ + + + + + Sbjct: 425 RVHTVLVEGPSKKSDAQFFGRTDTNKGVVF 454 >UniRef50_Q028J0 Ribosomal protein S12 methylthiotransferase rimO n=2 Tax=Acidobacteria RepID=RIMO_SOLUE Length = 465 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 59/409 (14%), Positives = 114/409 (27%), Gaps = 55/409 (13%) Query: 259 LPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKV------KGDKVLYAHASR 312 L C N + P + +++ + + D +L + Sbjct: 8 LGCPKNLVDSEVMMGQLVAKGHELTSHPDQADVLVVNTCSFIDPAKKESVDTILEMAEYK 67 Query: 313 ILHHETNPGCARALMQKHGDRYVWINPPAIPLS-TEEMDSVFA----LPYKRVPHPAYGN 367 + A L++++ P L T E+DS+ +P P Y Sbjct: 68 KIGRAKKLIVAGCLVERYRGDIRTEMPEVDALIGTNELDSIVDICEGMPPSTNPLEPYLY 127 Query: 368 ----ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVP 423 R+ A + I GC C+FC I ++ G +SR +S+++E + Sbjct: 128 HDLTPRVLATPRHFAYMKIAEGCDHPCTFCVIPQYRG-AFRSRRFESVVSEATRLFQQGI 186 Query: 424 GFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARD 483 +I G Y L R Sbjct: 187 REINLI----GQDTTCYGEDLGLKDG------------------------LAELLARLAQ 218 Query: 484 L--KGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GM 540 + K I + + + E + Y+ + +H L +M + Sbjct: 219 IETPQEKWIRFLYAYPNKVTQKLLDTLAE--HAALAKYIDMPLQHASANVLKRMKRGASG 276 Query: 541 GSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFY 600 + + E + FI PG D L +++ +F V + Sbjct: 277 DIFLKLIERIRRTIPGVA----IRTSFIVGFPGETAADFDELCAFVEAAKFDNLGVFTYS 332 Query: 601 PSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDP 649 + S + GK I + + + R ++ L+ P Sbjct: 333 DEDTSASYAL--DGKVDGRTIQNRKRRLMAIQRKIARARNRGLVGKEVP 379 >UniRef50_B8E0G0 MiaB-like tRNA modifying enzyme n=2 Tax=Dictyoglomus RepID=B8E0G0_DICTD Length = 417 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 99/292 (33%), Gaps = 42/292 (14%) Query: 369 RIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGV 428 + + + R + I GC C++C + GR +S+ D ++ E + + + GF + Sbjct: 113 FVTSEDRARAILKIQDGCNNFCTYCIVPYLRGRE-RSKPFDKVMEEAQKLVEN--GFKEI 169 Query: 429 ISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIK 488 + L G Y + + L + ++ G+ Sbjct: 170 V--LTGIRLGAYGRDLG------------------------DKDALSKLLLKLFEMDGLV 203 Query: 489 KILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKE 548 KI ++S DI IK + + I + ++ L KM + Y F++ Sbjct: 204 KIRLSSIEPMDIT---EGLIKLADHPKLCKHWHIPLQSGDDEILKKMNRRYDTKY--FEQ 258 Query: 549 LFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANST 608 + ++ + + I +P +E+ N L+ ++ F V + P P + Sbjct: 259 IVYKLREKV-PDVAITTDIIVGYPEESEENFNNTYLFAERMGFMRIHVFPYSPRPFTPAY 317 Query: 609 TMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE 660 + P I + E + D L + + ++ + + Sbjct: 318 KL---KPLPYEVITKRKEKLIKLSND----LWERYVSKFIEKELEVMVEERK 362 >UniRef50_D1PP61 RNA modification enzyme, MiaB family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP61_9FIRM Length = 446 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 82/281 (29%), Gaps = 39/281 (13%) Query: 367 NARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFT 426 AR+ + + I GC C +C+I G ++SR + + E + G Sbjct: 136 GARVISTPRHYAYLKIAEGCNNRCHYCAIPLIRG-PLRSRPIEDCVAEARWLA--GEGVR 192 Query: 427 GVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG 486 +I PTA Y P A L R + + G Sbjct: 193 ELILVAQDPTA--YGEDWGKPGAV------------------------CELLDRLQQIDG 226 Query: 487 IKKILIASGVRYDIAVEDPRYIKELATH-HVGGYLKIAPEHTEEGPLSKM-MKPGMGSYD 544 I+ I I I +I + + V YL + +H ++ L M + G + Sbjct: 227 IRWIRILYAYPERI---SDAFIAAMVRNTKVVPYLDLPIQHCDDAVLKAMNRRGGRADIE 283 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 L I+ PG +E L ++K RF + Sbjct: 284 DAIARLRAAIPGI----TLRTTLIAGFPGETEEQYAELCDFVKTMRFDRLGCFAYSAEEN 339 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLR 645 + M + K + + R + + + Sbjct: 340 TVAAKM-DGQLDEETKQRRADHIMELQAEVSADREKEKVGQ 379 >UniRef50_A5V8Y0 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=23 Tax=Proteobacteria RepID=MIAB_SPHWW Length = 453 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 52/364 (14%), Positives = 97/364 (26%), Gaps = 68/364 (18%) Query: 328 QKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCF 387 Q + + + A + D A + +P + + GC Sbjct: 117 QAYHNLPQLVADAAEGRRALDTDMPAASKFDTLPKRRRQGPT--------AFLTVQEGCD 168 Query: 388 GGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSP 447 C++C + G I SR +I++E +A+ D L G N + Sbjct: 169 KFCTYCVVPYTRGAEI-SRPWGAIVDEAKALVDAGAREI----TLLGQNVNAWTGEDDRG 223 Query: 448 RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRY 507 R + L R L G+ +I + D++ Sbjct: 224 RTQG----------------------LDGLIRALDALPGLARIRYTTSHPNDMSDGLIAA 261 Query: 508 IKELATHHVGGYLKIAPEHTEEGPLSKMMK-PGMGSYDRFKELFDTYSKQAGKEQYLIPY 566 E+A +L + + + L M + Y R E + Sbjct: 262 HGEVAKLM--PFLHLPVQAGSDRILKAMNRSHDAAGYLRLIERVRAARPDIA----VSGD 315 Query: 567 FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSE 626 FI PG DED ++ + P P + +M + Sbjct: 316 FIVGFPGETDEDFEATLAIVRAVDHAQAFSFKYSPRPGTPAASM-------------DGQ 362 Query: 627 DVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMRE 686 ++ +RL L N +G R + L+ + + Sbjct: 363 VAPAVMDERLQRLQALLNEQQHRFNL-------------ATVGKRCEVLIERDGKKPGQR 409 Query: 687 ARRQ 690 + Sbjct: 410 IGKS 413 >UniRef50_C7H912 RNA modification enzyme, MiaB family n=3 Tax=Ruminococcaceae RepID=C7H912_9FIRM Length = 441 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 49/346 (14%), Positives = 88/346 (25%), Gaps = 60/346 (17%) Query: 367 NARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFT 426 R+ + I GC C +C+I G + SR + E + G Sbjct: 135 GKRVIGTPAHYAYLKIAEGCNNRCHYCAIPGIRG-PLHSRDLADCVAEARWLA--GEGVK 191 Query: 427 GVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKG 486 +I PTA Y P L + + G Sbjct: 192 ELIVVAQDPTA--YGEDWGKP------------------------GSICELLDKLNKVPG 225 Query: 487 IKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRF 546 ++ I I I + +K V YL + +H + L M + + Sbjct: 226 LEWIRIMYAYPERITDDFIAAMKR--NEKVVPYLDLPIQHCNDTILKNMNRRSTRA--EL 281 Query: 547 KELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLAN 606 E+ ++ L I+ PG +E +L ++K+ RF + Sbjct: 282 LEVIGKLRREI-PGITLRTTLIAGFPGETEEQFEDLCNFVKEVRFDRLGCFAYSAEENTV 340 Query: 607 STTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKH 666 + M G+ ++E V + + Sbjct: 341 AAKM--DGQIDQETKDRRAELVMQIQTGIMAQKQ------------------------AE 374 Query: 667 LIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPA 712 +G L E R + + + P Sbjct: 375 KVGQTVRVLCDGIDEESGLYLCRTTGDAPEVDGNVCVSSEEPLYPG 420 >UniRef50_C9KNN8 tRNA-I(6)A37 modification enzyme MiaB n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNN8_9FIRM Length = 430 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 84/288 (29%), Gaps = 43/288 (14%) Query: 363 PAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTV 422 P Y + E R + I GC CS+C I G ++SR + + E E + Sbjct: 134 PLYDSP-----ERTRAFLKIEDGCQNFCSYCIIPYARG-PVKSRLPEHVHREAEKLVAM- 186 Query: 423 PGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRAR 482 GF ++ L G Y + R Sbjct: 187 -GFKEIV--LTGIHLGAYGRDLPGDIT------------------------LADACREVL 219 Query: 483 DLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG-MG 541 + G+K++ + S +++ E I+E +L + + + L M + Sbjct: 220 SVPGLKRLRLGSLESIELSPELFALIRE--DERFCAHLHLPLQAGSDKVLKDMNRHYDTQ 277 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 + R E + + I PG +ED +++K F V + Sbjct: 278 EFARLIEHIEEEVPGVA----ISTDIIVGFPGETEEDFEQGLSFVEKMNFARMHVFPYSR 333 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDP 649 + + A + + K H++ + Sbjct: 334 RTGTPAAAR--KDQVDEAVKKERVHRMQALADRKAEEFHRSFIGREMR 379 >UniRef50_C7GYJ0 tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYJ0_9FIRM Length = 440 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 79/282 (28%), Gaps = 40/282 (14%) Query: 366 GNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGF 425 + + VNI GC C++C + GR +SRS D I+ E Sbjct: 143 KEMPVDRVNKHKAFVNITFGCNNFCTYCIVPYTRGRE-KSRSLDKILGETADAVSLGAKE 201 Query: 426 TGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLK 485 G N Y N E ++ A ++ Sbjct: 202 VTF----LGQNVNSYR--------------------------GENGENFRDVLVEASKIQ 231 Query: 486 GIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPG-MGSYD 544 G+++I + D+ I ++ + ++ + + L +M + Y Sbjct: 232 GLERIRFMTSHPKDLT---DELIDVMSLDKIMPHIHLPVQSGSSEILKRMNRHYDRERYL 288 Query: 545 RFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPL 604 + + ++ + I P +ED +++ RF + Sbjct: 289 EIIDKIYSLNEDIA----ITTDIIVGFPTETEEDFSKTLDLVRRARFDAAFTFMYSKRRN 344 Query: 605 ANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRY 646 + + + + + K + K + R Sbjct: 345 TKAAN-FDGQVDRVEMGRRFDMLSELLKDISFEKNKKFIGRR 385 >UniRef50_Q6AQ27 Ribosomal protein S12 methylthiotransferase rimO n=3 Tax=Deltaproteobacteria RepID=RIMO_DESPS Length = 443 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 51/328 (15%), Positives = 88/328 (26%), Gaps = 68/328 (20%) Query: 376 IRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGP 435 R V I GC CS+C I G ++SRS ++ E++A+ + +I Sbjct: 144 FRAWVKITEGCDNRCSYCMIPSIRG-PLRSRSVADVLEEVQAMVASGVQEISLI----AQ 198 Query: 436 TANMYMLRCKSP---RAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILI 492 Y P I E L + I K Sbjct: 199 DLTAYGDDLGDDVNLLVLLKELLAKTSVPWIRLLYLYPSELLDELLQLMAANPRIVK--- 255 Query: 493 ASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDRFKELFD 551 YL I +H + L M +P G + F + Sbjct: 256 --------------------------YLDIPIQHVNDRVLHLMNRPYGRADLEEFVDKAR 289 Query: 552 TYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMY 611 + F+ PG +E+ + +L+ + V + A S Sbjct: 290 AHMPDIALR----TTFLVGFPGETEEEYAEIGEFLRVRKLDHVGVFPYSNEEGAPSEHF- 344 Query: 612 YTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSR 671 V K+ R + L ++Q L +K +G+ Sbjct: 345 ---------------PDQVDDEIKESRCARLL----------ELQQELSTEIQKKYVGTV 379 Query: 672 RDCLVPAPTIEEMREARRQNRNTRPALT 699 + LV + E + + + Sbjct: 380 QKVLVEGVSEETDLLLEGRTQYQAADVD 407 >UniRef50_D0J9M2 RNA modification protein n=1 Tax=Blattabacterium sp. (Periplaneta americana) str. BPLAN RepID=D0J9M2_BLASP Length = 466 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 98/306 (32%), Gaps = 26/306 (8%) Query: 371 PAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVIS 430 P+ + I ++I RGC C+FC + GR +S S SII E E + + Sbjct: 151 PSIKKITTFLSITRGCDNMCTFCIVPFTRGRE-RSSSPYSIIKECENLYEKGYKEV---- 205 Query: 431 DLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKI 490 L G + Y L +Q + + ++L A + +I Sbjct: 206 TLLGQNVDSY-LWFGGGLKKQIKIDNN-------NEKIIDFSRLLDLL--ASKIPF-MRI 254 Query: 491 LIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELF 550 ++ +D++ I + ++ ++ + + L M + + +++ L Sbjct: 255 RFSTSNPHDMSDRVIEVISK--HSNICKHIHLPVQSGSNKILKLMNR--KYTREKYLSLI 310 Query: 551 DTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTM 610 E + I+ +ED + + K ++ + ++ P + Sbjct: 311 QKIRS-IIPECSISHDIITGFCNEEEEDHLETISLMNKVKYDYGYMFSYSPRAGTYAYKK 369 Query: 611 YYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGS 670 K E + + + R+ K L ++ + + G Sbjct: 370 LKDNVPENIKKKRLKEIIDLQRIHSIFRMKKYLGTIQ-----EVLIEGKSKKNNQDWYGR 424 Query: 671 RRDCLV 676 +V Sbjct: 425 NTQNIV 430 >UniRef50_A8F640 MiaB-like tRNA modifying enzyme n=1 Tax=Thermotoga lettingae TMO RepID=A8F640_THELT Length = 433 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 98/311 (31%), Gaps = 44/311 (14%) Query: 374 EMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLG 433 + R + + GC CS+C + + G+ I+S+ + +I E+ + + G+ ++ L Sbjct: 138 DRTRAYIKLEDGCNEFCSYCIVPKTRGKQIRSKPVEVVIKEMNDLLNN--GYKEIV--LT 193 Query: 434 GPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIA 493 G Y + + L + D +I ++ Sbjct: 194 GVNLGKYGRDIGTSLSM----------------------LLRTLLNQIHD---DSRIRLS 228 Query: 494 SGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTY 553 S D++ E ++ + +L I + L KM + + + ++F+ Sbjct: 229 SINVQDLSDELISLFA--LSNKLCPHLHIPLQSGSNRILQKMNR--KYTVEEALDIFEKL 284 Query: 554 SKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYT 613 K + I PG D + +K+ F + + P ++ + Y Sbjct: 285 -KSINQYFSFTTDVIVGFPGETIGDFLQTQELIKEIGFVKVHIFKYSSRPGTVASKLGYH 343 Query: 614 GKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRD 673 N + + + L K + + + IR L + + + Sbjct: 344 ISNDEKER----------RAKELAALCKEISEKYRKKSIGKIRHVLVEHNRSGICSGYDE 393 Query: 674 CLVPAPTIEEM 684 V + Sbjct: 394 YYVRHEFADGD 404 >UniRef50_Q3AV90 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=40 Tax=cellular organisms RepID=MIAB_SYNS9 Length = 472 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 63/459 (13%), Positives = 137/459 (29%), Gaps = 54/459 (11%) Query: 233 GWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYV 292 S T G + C NK + + + V Sbjct: 3 ATSLKTLTPPSKQGLDQNRRSYWITTFGCQMNKADSERMAGILESMGYCEATAELDADLV 62 Query: 293 LLPSFE-KVKGDKVLYAHASRILHHETNPGC-------------ARALMQKHGDRYVWIN 338 L + + ++ +Y++ R + + +L+++ + + + Sbjct: 63 LYNTCTIRDNAEQKVYSYLGRQAQRKRDNPNLTLVVAGCVAQQEGESLLRRVPELDLVMG 122 Query: 339 PP-AIPLST--EEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSI 395 P A L T +++DS + H I VN++ GC C++C + Sbjct: 123 PQHANRLETLLQQVDSGQQVVATEEHHILEDITTARRDSAICGWVNVIYGCNERCTYCVV 182 Query: 396 TEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRR 455 G+ QSR ++I E+E + GF + L G + Y AE Sbjct: 183 PSVRGQE-QSRRPEAIRLEMEGLAAQ--GFKEI--TLLGQNIDAYGRDLPGITAEGRREH 237 Query: 456 LSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHH 515 +L D++GI+++ A+ +L+ Sbjct: 238 -----------------TLTDLLHHVHDVEGIERLRFATSHPRYFTERLIDACADLSK-- 278 Query: 516 VGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTR 575 V + I + + L M + + + + I PG Sbjct: 279 VCEHFHIPFQSGDNALLKSMARGYTV---ERYRRIIDRIRDRMPDASISADVIVGFPGET 335 Query: 576 DEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDV--FVPKG 633 D + + F + P P + T + + P + + +++ V + Sbjct: 336 DAQYRRTLDLIDEIAFDQVNTAAYSPRPNTPAAT--WDNQLPESVKVERLKEINALVERN 393 Query: 634 DKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRR 672 ++R + + ++ + + + L+G R Sbjct: 394 ARERNIR------YQGRTEEVLAEGINPKDPEQLMGRTR 426 >UniRef50_O66772 Putative methylthiotransferase aq_474 n=3 Tax=Aquificaceae RepID=Y474_AQUAE Length = 410 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 92/297 (30%), Gaps = 45/297 (15%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 + +E +R + + GC C+FC I G+ ++S + I+++++ + GF Sbjct: 134 DTVLYFEGVRPFLKVQEGCNKFCTFCVIPYARGK-VRSVDLEKIVHQVKLLAQK--GFKE 190 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 V+ L G + Y L ++GI Sbjct: 191 VV--LTGTQLSQYGWD--------------------------KGYNLYTLLTELIKIEGI 222 Query: 488 KKILIASGVRYDIAVEDPRYIKELA-THHVGGYLKIAPEHTEEGPLSKMMKP-GMGSYDR 545 + I ++S ++ D +K + + + ++ + L M + Y+ Sbjct: 223 ELIRLSSMHIKEM---DKELLKLIVSEEKIAPHFHLSLQSGSNRILELMDRGYTREEYEE 279 Query: 546 FKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLA 605 + I P +ED +LK+ + + P Sbjct: 280 VVNFIVENRP----ISSIGTDVIVGFPTESEEDFQETYEFLKRIPISYMHIFPYSDRPFT 335 Query: 606 NSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAM 662 ++ + P K E V + K Q++ + + L+ + + Sbjct: 336 KASKL-----KPKLPERIKKERVRILKELDQKKRQEFYEKNKGKELRALVIEENRLL 387 >UniRef50_Q6MGT1 Ribosomal protein S12 methylthiotransferase rimO n=1 Tax=Bdellovibrio bacteriovorus RepID=RIMO_BDEBA Length = 457 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 90/299 (30%), Gaps = 47/299 (15%) Query: 368 ARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTG 427 R+ + R + I GC C+FC+I G +QSRS D+I+ E + + Sbjct: 145 PRVNSQPGHRAYLKISEGCMKRCAFCAIPLIRGN-LQSRSIDAIVAEAKLLVAGGVKELI 203 Query: 428 VISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGI 487 +IS Y + T E + L + ++G+ Sbjct: 204 IIS----HDFTDYGFDIRRKD-------------------PTRKESPVELLKALDQVEGL 240 Query: 488 KKILIASGVRYDIAVEDPRYIKELAT-----HHVGGYLKIAPEHTEEGPLSKMMKP-GMG 541 + I + + + +E+ + Y + +H + L M + Sbjct: 241 QWIRL-------MYLYPDGITQEMVQVIKNSTKIVKYFDMPLQHVNDQVLKSMNRKMTRD 293 Query: 542 SYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYP 601 + + +A + FI PG E L ++ + +F + P Sbjct: 294 EIETALMNIREHLPEA----VIRTQFIVGFPGETQEQFEELLNFVAEQQFDRVGCFKYSP 349 Query: 602 SPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALE 660 M + Y+ + + + + R H + +I + Sbjct: 350 EENTPGGRM--ENQIDEETKQYRHDALMEVQQNISREKHSDFV----GKTLQVIVEGFS 402 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.306 0.122 0.338 Lambda K H 0.267 0.0376 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,328,643,349 Number of Sequences: 3077464 Number of extensions: 203441526 Number of successful extensions: 576801 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 853 Number of HSP's successfully gapped in prelim test: 743 Number of HSP's that attempted gapping in prelim test: 572081 Number of HSP's gapped (non-prelim): 2995 length of query: 739 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 603 effective length of database: 621,861,252 effective search space: 374982334956 effective search space used: 374982334956 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (42.1 bits)