19/01/2012 04:07:57 : INFO  : Run start: Thu Jan 19 04:07:55 GMT 2012
19/01/2012 04:08:06 : INFO  : Initialised job
19/01/2012 04:08:09 : INFO  : Renaming log file 'phyre2_20120119_040754.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/bd4aeb9dacb4a66e/phyre_20120119_040754.log'
19/01/2012 04:08:12 : INFO  : Initialised job:
Sequence
>batch____
MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFP
DTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLL
QDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVY
SNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATF
MGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRF
GVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSH

19/01/2012 04:08:14 : INFO  : Checked sequence
19/01/2012 04:08:20 : INFO  : Finding homologues with PSI-BLAST
19/01/2012 04:08:22 : INFO  : PSI-BLAST 3 iterations
19/01/2012 04:10:52 : INFO  : PSI-BLAST 5 iterations
19/01/2012 04:14:20 : INFO  : Finished PSI-BLAST
19/01/2012 04:14:24 : INFO  : Running Buildali to generate a3m file
19/01/2012 04:32:55 : INFO  : Converting to HMM
19/01/2012 04:33:02 : INFO  : Calibrating HMM
19/01/2012 04:33:26 : INFO  : Searching HMM database
19/01/2012 04:40:49 : INFO  : Finished buildali
19/01/2012 04:40:52 : INFO  : Predicting secondary structure
19/01/2012 04:41:07 : INFO  : Predicted secondary structure (PSI-Pred)
19/01/2012 04:41:10 : INFO  : Predicting Disordered regions
19/01/2012 04:41:17 : INFO  : Predicted Disorder (Disopred)
19/01/2012 04:41:21 : INFO  : Running memsat_svm check
19/01/2012 04:48:46 : INFO  : Running memsat_svm full
19/01/2012 04:57:06 : INFO  : Predicted Transmembrane (memsat_svm) ID 'bd4aeb9dacb4a66e'
19/01/2012 04:57:10 : INFO  : Initialising fold library search
19/01/2012 04:57:17 : INFO  : Initialised search input
19/01/2012 04:57:23 : INFO  : Building Ensemble models
19/01/2012 04:57:30 : INFO  : Building hh.c3k96B_.model.1.pdb
19/01/2012 04:58:02 : INFO  : Building c1m67A_.1.pdb
19/01/2012 04:58:32 : INFO  : Building c3k96B_.2.pdb
19/01/2012 04:59:01 : INFO  : Building c1wpqB_.3.pdb
19/01/2012 04:59:32 : INFO  : Building c1yj8C_.4.pdb
19/01/2012 05:00:01 : INFO  : Building c1z82A_.5.pdb
19/01/2012 05:00:30 : INFO  : Building c1txgA_.6.pdb
19/01/2012 05:01:00 : INFO  : Building c1bg6A_.7.pdb
19/01/2012 05:01:29 : INFO  : Building c2ew2B_.8.pdb
19/01/2012 05:01:58 : INFO  : Building c3hn2A_.9.pdb
19/01/2012 05:02:25 : INFO  : Building c3hwrA_.10.pdb
19/01/2012 05:02:51 : INFO  : Building c2qytA_.11.pdb
19/01/2012 05:03:17 : INFO  : Building c2y0dB_.12.pdb
19/01/2012 05:03:44 : INFO  : Building c3ghyA_.13.pdb
19/01/2012 05:04:11 : INFO  : Building c1mv8A_.14.pdb
19/01/2012 05:04:36 : INFO  : Building c2ofpB_.15.pdb
19/01/2012 05:05:02 : INFO  : Building c3gg2B_.16.pdb
19/01/2012 05:05:28 : INFO  : Building c1ks9A_.17.pdb
19/01/2012 05:05:54 : INFO  : Building c3g17H_.18.pdb
19/01/2012 05:06:20 : INFO  : Building c1pgjA_.19.pdb
19/01/2012 05:06:46 : INFO  : Building c1pgqA_.20.pdb
19/01/2012 05:07:40 : INFO  : Finished HH model building
19/01/2012 05:07:43 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
19/01/2012 05:08:46 : INFO  : html domain output complete ID 'bd4aeb9dacb4a66e'
19/01/2012 07:30:16 : INFO  : Run end  : Thu Jan 19 07:30:14 GMT 2012
