BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (89 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=...   178   5e-44
UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteo...   130   1e-29
UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID...   123   2e-27
UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacte...   121   5e-27
UniRef50_P57620 Exodeoxyribonuclease I n=2 Tax=Buchnera aphidico...   120   1e-26
UniRef50_Q8K923 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   117   1e-25
UniRef50_A2R5F8 Remark: it is assumed (Fragment) n=1 Tax=Aspergi...   112   3e-24
UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellul...   111   8e-24
UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammapr...   110   1e-23
UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter...   109   2e-23
UniRef50_C6XFI1 Exonuclease I n=1 Tax=Candidatus Liberibacter as...   105   5e-22
UniRef50_Q89A43 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   104   8e-22
UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus cap...   102   4e-21
UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter...   102   5e-21
UniRef50_Q7VQX2 Exodeoxyribonuclease I n=2 Tax=Candidatus Blochm...   101   7e-21
UniRef50_A3WL65 Exonuclease I n=2 Tax=Idiomarina RepID=A3WL65_9GAMM   100   2e-20
UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacte...    97   1e-19
UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitroso...    97   2e-19
UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales...    96   3e-19
UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium...    93   2e-18
UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacter...    92   6e-18
UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xa...    91   8e-18
UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinel...    90   2e-17
UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacte...    88   7e-17
UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas ...    87   1e-16
UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=...    87   2e-16
UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae...    86   3e-16
UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepI...    86   3e-16
UniRef50_Q056Y2 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...    81   1e-14
UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus ...    79   5e-14
UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate divisio...    72   4e-12
UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae ...    53   3e-06
UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2...    52   6e-06
UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3X...    51   1e-05
UniRef50_B9NSM4 Exodeoxyribonuclease I n=1 Tax=Rhodobacteraceae ...    50   2e-05
UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacter...    47   1e-04
UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW    47   2e-04
UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL...    40   0.028

>UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=EX1_ECOLI
          Length = 475

 Score =  178 bits (451), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 84/89 (94%), Positives = 85/89 (95%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M D  +Q TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP
Sbjct: 2  MNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 61

Query: 61 GAVLITGITPQEARAKGENEAAFAARIHS 89
          GAVLITGITPQEARAKGENEAAFAARIHS
Sbjct: 62 GAVLITGITPQEARAKGENEAAFAARIHS 90


>UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteobacteria
          RepID=Q1QT40_CHRSD
          Length = 495

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 68/89 (76%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M     +PTFL+HDYETFG  P  DRPAQFAAIRTDS+FN +GEP  FYCKPADD+LP P
Sbjct: 1  MAQGKTEPTFLWHDYETFGADPRRDRPAQFAAIRTDSDFNPVGEPMTFYCKPADDFLPHP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARIHS 89
           A LITGITPQ AR +G  E  FAARIH+
Sbjct: 61 QACLITGITPQAARRRGLAEIEFAARIHA 89


>UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID=B0BNV2_ACTPJ
          Length = 514

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/85 (65%), Positives = 67/85 (78%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          +K  TF F+DYE+FG  PALDRPAQFA IRTDS+FN+IGEP +FYCK   DYLP P AV+
Sbjct: 2  NKNLTFFFYDYESFGVSPALDRPAQFAGIRTDSDFNIIGEPVMFYCKQTPDYLPSPEAVM 61

Query: 65 ITGITPQEARAKGENEAAFAARIHS 89
          +TGITPQ+  A+G  E  FAARIH+
Sbjct: 62 VTGITPQQCNAEGVPEPEFAARIHA 86


>UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacteria
          RepID=Q483M2_COLP3
          Length = 487

 Score =  121 bits (304), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 52/84 (61%), Positives = 68/84 (80%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
          +QP+ L+HDYET+G +P  D+P+QFA IRTD + N+IGEPE+FYC P  DYLP P A L+
Sbjct: 11 EQPSILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVDYLPHPEACLV 70

Query: 66 TGITPQEARAKGENEAAFAARIHS 89
          TGITPQ+A+ +G +EA FAARIH+
Sbjct: 71 TGITPQKAQREGLSEAEFAARIHT 94


>UniRef50_P57620 Exodeoxyribonuclease I n=2 Tax=Buchnera aphidicola (Acyrthosiphon
          pisum) RepID=EX1_BUCAI
          Length = 413

 Score =  120 bits (301), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/83 (61%), Positives = 61/83 (73%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
          K P FLF+DYETFG H ALD+PAQFA IRTD   N+I +P+ FYC P+DDYLP PG+VLI
Sbjct: 7  KTPNFLFYDYETFGIHTALDKPAQFACIRTDINLNIIDDPQYFYCFPSDDYLPDPGSVLI 66

Query: 66 TGITPQEARAKGENEAAFAARIH 88
          T ITPQ     G NE  F+ +I+
Sbjct: 67 THITPQYTEKNGTNEYNFSQKIY 89


>UniRef50_Q8K923 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola (Schizaphis
          graminum) RepID=EX1_BUCAP
          Length = 482

 Score =  117 bits (293), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/79 (59%), Positives = 61/79 (77%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          FLF+DYETFG H +LD+PAQF++IRTD  FN++ EP+ FYC P+DDYLP P ++LITGIT
Sbjct: 12 FLFYDYETFGIHTSLDKPAQFSSIRTDKNFNIMEEPKCFYCFPSDDYLPDPSSILITGIT 71

Query: 70 PQEARAKGENEAAFAARIH 88
          P+     G NE  F+ +IH
Sbjct: 72 PEYTEKHGFNEYKFSKKIH 90


>UniRef50_A2R5F8 Remark: it is assumed (Fragment) n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2R5F8_ASPNC
          Length = 298

 Score =  112 bits (281), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/52 (100%), Positives = 52/52 (100%)

Query: 38  EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS 89
           EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS
Sbjct: 124 EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS 175


>UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellular organisms
          RepID=Q21WQ6_RHOFD
          Length = 485

 Score =  111 bits (277), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 63/87 (72%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          MT +    TFL+HDYETFGT+   DRPAQFAAIRTD+E NVIG P + YC+PA D+LP P
Sbjct: 1  MTPSPSHHTFLWHDYETFGTNTRRDRPAQFAAIRTDAELNVIGAPLMLYCQPAGDFLPDP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARI 87
           A LITGITPQ    KG  E  FAA+I
Sbjct: 61 QACLITGITPQLCLEKGIPEYQFAAQI 87


>UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammaproteobacteria
          RepID=Q21I25_SACD2
          Length = 485

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 60/82 (73%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
          Q TF +HDYET+G +PA+DRP+QFA +RTD + N+IGEP V YCKP +D  P P A L+T
Sbjct: 2  QKTFYWHDYETWGANPAVDRPSQFAGVRTDMDLNIIGEPLVIYCKPPEDIWPNPEACLVT 61

Query: 67 GITPQEARAKGENEAAFAARIH 88
          G+TPQE  AKG  E  F  +IH
Sbjct: 62 GLTPQETLAKGVTEREFIKQIH 83


>UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria
          RepID=B3PLL7_CELJU
          Length = 497

 Score =  109 bits (273), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 1/88 (1%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          MT T+ Q T  +HDYET+G  PA+DRP QFA +RTD + N++GEP   Y +PA D LP+P
Sbjct: 1  MTSTE-QITLYWHDYETWGESPAIDRPVQFAGVRTDLDLNILGEPLTIYARPAPDVLPKP 59

Query: 61 GAVLITGITPQEARAKGENEAAFAARIH 88
           A LITGITPQEA AKG +EA F A IH
Sbjct: 60 EACLITGITPQEAEAKGVSEADFIAAIH 87


>UniRef50_C6XFI1 Exonuclease I n=1 Tax=Candidatus Liberibacter asiaticus str.
          psy62 RepID=C6XFI1_LIBAP
          Length = 471

 Score =  105 bits (262), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/79 (62%), Positives = 57/79 (72%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+ +DYETFG   ALDRPAQFA +R D ++  I   EVF+CKPADDYLP P AV ITGIT
Sbjct: 5  FVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGIT 64

Query: 70 PQEARAKGENEAAFAARIH 88
          PQ+A   G  EA F+ RIH
Sbjct: 65 PQKALRDGVVEAEFSRRIH 83


>UniRef50_Q89A43 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola (Baizongia
          pistaciae) RepID=EX1_BUCBP
          Length = 481

 Score =  104 bits (260), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/81 (55%), Positives = 61/81 (75%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          TFLF+DYETFG +PALD+P+QF+ I+TD +FN+IG  +  +C P+ DYLP P +VLITGI
Sbjct: 10 TFLFYDYETFGKNPALDKPSQFSCIQTDIDFNIIGSIQEIFCYPSVDYLPDPESVLITGI 69

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +P+     G NE  FA +I+S
Sbjct: 70 SPKYTSLFGVNEFEFAKKIYS 90


>UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus capsulatus
          RepID=Q605A2_METCA
          Length = 478

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/81 (60%), Positives = 59/81 (72%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
          P+F ++D ETFGT PA DR AQFA +RTD EFN IG P+V YC+P+DD +P P A L+TG
Sbjct: 5  PSFYWYDLETFGTDPARDRIAQFAGLRTDLEFNPIGPPDVLYCRPSDDMVPYPDACLVTG 64

Query: 68 ITPQEARAKGENEAAFAARIH 88
          ITPQ A   G  E+AF A IH
Sbjct: 65 ITPQYAAELGVPESAFIATIH 85


>UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria
          RepID=A4ADV7_9GAMM
          Length = 482

 Score =  102 bits (253), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 57/79 (72%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          TF +HDYETFG  PA DRP+QFA +RTD + N+IGEP V Y +P  DY+P P A LITGI
Sbjct: 6  TFYWHDYETFGVDPAYDRPSQFAGLRTDLDLNLIGEPLVIYAQPPRDYVPHPDACLITGI 65

Query: 69 TPQEARAKGENEAAFAARI 87
          TPQ A A+G  EA F + I
Sbjct: 66 TPQTALAEGVVEAQFMSTI 84


>UniRef50_Q7VQX2 Exodeoxyribonuclease I n=2 Tax=Candidatus Blochmannia
          RepID=Q7VQX2_BLOFL
          Length = 501

 Score =  101 bits (252), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/87 (52%), Positives = 61/87 (70%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M    K+PTFL +DYETFG +PALDRPAQFA+IR ++    + + EVF+C+  +DYLP P
Sbjct: 1  MLSNIKKPTFLIYDYETFGLNPALDRPAQFASIRVNNSLCPVEKKEVFFCQIPNDYLPNP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARI 87
           +VLITGITP +  + G  E  FA +I
Sbjct: 61 ESVLITGITPYDTLSNGLLEPQFAYQI 87


>UniRef50_A3WL65 Exonuclease I n=2 Tax=Idiomarina RepID=A3WL65_9GAMM
          Length = 486

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 57/85 (67%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          +   QPTF +HDYET+G  P +DRPAQFA +RT  +F  +G P   Y +P  D+LP P A
Sbjct: 7  NNKNQPTFYWHDYETWGARPLIDRPAQFAGMRTTLDFQPVGRPLTIYAQPTPDFLPDPEA 66

Query: 63 VLITGITPQEARAKGENEAAFAARI 87
          VLITGITPQ A  +G NEA FA  I
Sbjct: 67 VLITGITPQYALNQGVNEANFAQAI 91


>UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacterium NOR5-3
          RepID=B8KPJ8_9GAMM
          Length = 482

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/79 (60%), Positives = 52/79 (65%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          T  +HDYETFG  P  DRPAQFA +RTD + N IGEP V Y KP  DY+P P A LITGI
Sbjct: 6  TLYWHDYETFGVDPGYDRPAQFAGLRTDLDLNPIGEPLVLYAKPPRDYVPHPDACLITGI 65

Query: 69 TPQEARAKGENEAAFAARI 87
          TPQ A A G  EA F   I
Sbjct: 66 TPQAALAAGVPEADFIKAI 84


>UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitrosomonas
          RepID=Q0AEW3_NITEC
          Length = 486

 Score = 96.7 bits (239), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 53/81 (65%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          T  +HDYET G +P  DRP QFA +RTD   N IG+P V YCKPA D LP P A L+TGI
Sbjct: 7  TLYWHDYETSGANPRQDRPVQFAGLRTDEALNEIGDPLVIYCKPARDRLPHPEACLLTGI 66

Query: 69 TPQEARAKGENEAAFAARIHS 89
          TPQ A  +G  E  F A IH+
Sbjct: 67 TPQMAATRGLPEPEFIALIHA 87


>UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales
          RepID=A6VXX3_MARMS
          Length = 484

 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/81 (55%), Positives = 58/81 (71%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +F + D+ET GT PA DRP QFA IRTD +FN IGEP +FYC+ A+D LPQP A L+TGI
Sbjct: 8  SFFWFDFETTGTDPARDRPMQFAGIRTDLDFNPIGEPIMFYCRLAEDVLPQPEACLLTGI 67

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +PQ+A  +G  EA F   + +
Sbjct: 68 SPQDANREGLCEAEFMQAVEA 88


>UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium HTCC2080
          RepID=A0Z9I3_9GAMM
          Length = 483

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 55/80 (68%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +F +HDYET G +   DRP QFA +RTD  FNVI EP V YC+P+ D L  P A+ +TGI
Sbjct: 6  SFYWHDYETSGANVFEDRPLQFAGVRTDKNFNVISEPLVHYCRPSPDCLLHPAAIRVTGI 65

Query: 69 TPQEARAKGENEAAFAARIH 88
          +P +A A+G NE AF A+I 
Sbjct: 66 SPYKALAEGANEGAFMAKIQ 85


>UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacteria
          RepID=A5CVQ8_VESOH
          Length = 473

 Score = 91.7 bits (226), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 1/81 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          TF ++DYETFG  P +DR +QFA IRTD  FN++ E ++FYCKP +D L  P   LITGI
Sbjct: 3  TFYWYDYETFGISPKIDRISQFAGIRTDENFNILDE-QMFYCKPTNDCLLSPETCLITGI 61

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +PQ    KG  E  F  +IH+
Sbjct: 62 SPQLCEQKGMIEHKFIKKIHA 82


>UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xanthomonas
          albilineans RepID=D2UDX2_XANAL
          Length = 492

 Score = 91.3 bits (225), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 47/79 (59%), Positives = 55/79 (69%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D ETFG  P   R AQFAA+RTD+  N I EP  F+ +PADD LP P A LITGI
Sbjct: 17 SFLFYDLETFGADPRRTRIAQFAAVRTDAALNQIEEPISFFVQPADDLLPSPVATLITGI 76

Query: 69 TPQEARAKGENEAAFAARI 87
          TPQ+A  +G NEA   ARI
Sbjct: 77 TPQQALREGINEADAFARI 95


>UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinelandii DJ
          RepID=C1DSN1_AZOVD
          Length = 476

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/81 (50%), Positives = 51/81 (62%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +  ++DYET G +P  DRP Q A IRTD   N IG P   YC+PADD LP P A L+TGI
Sbjct: 4  SIFWYDYETTGINPRCDRPLQVAGIRTDEALNEIGAPLNLYCRPADDILPHPAACLVTGI 63

Query: 69 TPQEARAKGENEAAFAARIHS 89
          TP+    +G  EA F  R+H+
Sbjct: 64 TPRLLAERGLCEAEFVTRLHA 84


>UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacterales bacterium HTCC2255
          RepID=UPI0000E0E98F
          Length = 488

 Score = 88.2 bits (217), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 44/80 (55%), Positives = 49/80 (61%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLFHDYET+G  P  D P QFAAIRTD       EP     K   DYLP P AVL+TGI
Sbjct: 7  SFLFHDYETWGISPQHDYPCQFAAIRTDENLQQCDEPINITAKIHLDYLPHPQAVLVTGI 66

Query: 69 TPQEARAKGENEAAFAARIH 88
          TPQ   A+GE E  F  +IH
Sbjct: 67 TPQMTLAEGEYEYTFMQKIH 86


>UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas
          RepID=B4SPA5_STRM5
          Length = 479

 Score = 87.4 bits (215), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/80 (53%), Positives = 56/80 (70%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D ETFG  P   R +Q+AAIRTD++ N I  P  F+ +PADD LP P A L+TGI
Sbjct: 4  SFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLPSPMATLVTGI 63

Query: 69 TPQEARAKGENEAAFAARIH 88
          TPQ+A A+G +EA    RI+
Sbjct: 64 TPQQALAEGISEAEAFDRIN 83


>UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=Reinekea
          blandensis MED297 RepID=A4BJV3_9GAMM
          Length = 517

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 56/82 (68%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
          P++L++DYET+GT P+ DR AQFAA+RTD + N+I EP   +CKP  D +  PGAV IT 
Sbjct: 9  PSYLWYDYETWGTVPSRDRIAQFAAVRTDMDLNIIEEPINLFCKPDIDTVIDPGAVQITR 68

Query: 68 ITPQEARAKGENEAAFAARIHS 89
          ++P E    G +E  F+  +H+
Sbjct: 69 LSPLELEQTGLSEWEFSQAVHN 90


>UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae
          RepID=Q2P315_XANOM
          Length = 481

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 53/79 (67%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D ETFG  P   R AQFAA+RTD++  VI EP  F+ +PADD LP P A ++T I
Sbjct: 4  SFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMVTAI 63

Query: 69 TPQEARAKGENEAAFAARI 87
          TPQ A  +G  EA   ARI
Sbjct: 64 TPQHALREGVTEAEAFARI 82


>UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepID=Q4K7B4_PSEF5
          Length = 497

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           +  ++DYET G +P  DRP Q A IRTD   N I EP   YC+P+DD LP P A +ITGI
Sbjct: 25  SLFWYDYETTGINPRCDRPLQVAGIRTDLALNEIDEPVNLYCQPSDDILPHPMACMITGI 84

Query: 69  TPQEARAKGENEAAFAARIH 88
           TP     +G  EA F  R+H
Sbjct: 85  TPGRLAEQGLGEADFMTRVH 104


>UniRef50_Q056Y2 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola str. Cc
          (Cinara cedri) RepID=Q056Y2_BUCCC
          Length = 475

 Score = 80.9 bits (198), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 54/88 (61%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M +   +   +F+DYETFG + ALD+ +QF +I TD++F+ I +  + +C P  DYLP P
Sbjct: 1  MCEYFSKKKIIFYDYETFGKNVALDKVSQFCSIETDNKFSYIIKKTILFCYPPIDYLPDP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARIH 88
           A+LIT I PQ     G NE   + +IH
Sbjct: 61 EAILITKILPQYTYKYGLNEYFLSKKIH 88


>UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus neapolitanus c2
          RepID=D0KZN4_HALNC
          Length = 495

 Score = 79.0 bits (193), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D+ET G+ P  DRP QFAA+RT+ E   I  P   Y   + + LP P AVL+TGI
Sbjct: 2  SFLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLVTGI 61

Query: 69 TPQE-ARAKGENEAAFAARIHS 89
           PQ  A + G  EA FAA IH+
Sbjct: 62 LPQTLASSGGRPEAEFAALIHA 83


>UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate division TM7
          RepID=A5KSP8_9BACT
          Length = 476

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 47/85 (55%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          D   TF F+D ET G  P  DR  QFA  RT  + + IGEP     +  DD LP P AV+
Sbjct: 4  DMAETFFFYDLETSGLDPRRDRIMQFAGQRTTMDLDPIGEPFNILVRLNDDVLPSPDAVM 63

Query: 65 ITGITPQEARAKGENEAAFAARIHS 89
          +TGITPQ+   +G  EA F    H+
Sbjct: 64 VTGITPQKTHEEGIAEAEFIKLFHN 88


>UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae
          RepID=B5K7E4_9RHOB
          Length = 500

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G  PA D+P QFAAI TD  F V  +     C+ A   LP P A+++T +T
Sbjct: 3  FVFYDLETTGLSPAFDQPLQFAAIYTDENF-VEKDRVNIRCRLAPHILPSPQALVVTRVT 61

Query: 70 PQE 72
          P +
Sbjct: 62 PDQ 64


>UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2
          RepID=C0QKN8_DESAH
          Length = 471

 Score = 52.0 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          TFLF+D ET G +PA D+   FAAIRTD E   I    +      +D +P PGA +   +
Sbjct: 3  TFLFYDIETSGLNPAFDQILTFAAIRTDLELREIDRTSIV-ISLRNDIVPSPGAFITHRL 61

Query: 69 TPQEARAKGENEAAFAARIH 88
          TP++ +  G  E    A IH
Sbjct: 62 TPEDLK-DGLCEYQGVALIH 80


>UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3XEM3_9RHOB
          Length = 459

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G  P  D+P QFAAI TD  F V  +     C+ A   LP P A+++T +T
Sbjct: 3  FVFYDLETTGISPEFDQPLQFAAIWTDENF-VEKDRVNIRCRLAPHILPSPQALVVTRVT 61

Query: 70 PQE 72
          P +
Sbjct: 62 PDQ 64


>UniRef50_B9NSM4 Exodeoxyribonuclease I n=1 Tax=Rhodobacteraceae bacterium KLH11
          RepID=B9NSM4_9RHOB
          Length = 469

 Score = 50.4 bits (119), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F F D ET GT PA D+P QFA I TD     +   ++  C+ +   LP P A+ +TG++
Sbjct: 2  FAFFDLETSGTSPAFDQPLQFAGILTDDTLEEVERIDI-RCRLSPHILPAPWALAVTGVS 60

Query: 70 P 70
          P
Sbjct: 61 P 61


>UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacteria
          RepID=B6J811_COXB1
          Length = 458

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          ++ + T+LF+D ET G +   D+  QFAAIRTD   N +   E+   +   D +P P A+
Sbjct: 2  SNHRKTYLFYDLETTGLNKCFDQIIQFAAIRTDEALNELNRHEIL-IRLNPDVIPSPEAM 60

Query: 64 LITGIT-PQEARAKGENEA 81
          +I   +  Q    K E EA
Sbjct: 61 IIHRFSIDQMLSGKAEIEA 79


>UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW
          Length = 482

 Score = 47.0 bits (110), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          T LF+D ET G + + D+  QFAAIRTD +FN I E   F+ K   D  P P A +   I
Sbjct: 6  TLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEI-ERFNFFVKLNPDTTPSPMATITHHI 64

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +  +A   G  E     +IH 
Sbjct: 65 SIAQANT-GIAEYQAIRKIHK 84


>UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL3
          RepID=B4WCZ9_9CAUL
          Length = 476

 Score = 39.7 bits (91), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G     D+  QFAAI TD + N +   E+  C+     +P P A+L   ++
Sbjct: 3  FVFYDTETTGLSKGFDQIVQFAAIHTDGDLNELDRFEL-RCRLQPHVVPHPKAMLANRLS 61


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteo...   158   5e-38
UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=...   156   2e-37
UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacte...   155   3e-37
UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammapr...   152   3e-36
UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID...   151   5e-36
UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellul...   149   2e-35
UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter...   143   2e-33
UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus cap...   142   3e-33
UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinel...   141   5e-33
UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter...   141   6e-33
UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales...   141   7e-33
UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitroso...   141   8e-33
UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacte...   140   9e-33
UniRef50_P57620 Exodeoxyribonuclease I n=2 Tax=Buchnera aphidico...   139   3e-32
UniRef50_A3WL65 Exonuclease I n=2 Tax=Idiomarina RepID=A3WL65_9GAMM   139   3e-32
UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepI...   139   3e-32
UniRef50_Q8K923 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   138   4e-32
UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacter...   135   3e-31
UniRef50_Q89A43 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   135   4e-31
UniRef50_Q7VQX2 Exodeoxyribonuclease I n=2 Tax=Candidatus Blochm...   134   1e-30
UniRef50_C6XFI1 Exonuclease I n=1 Tax=Candidatus Liberibacter as...   133   2e-30
UniRef50_Q056Y2 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   129   2e-29
UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate divisio...   129   3e-29
UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacte...   129   4e-29
UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas ...   128   6e-29
UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xa...   127   8e-29
UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=...   125   4e-28
UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium...   125   4e-28
UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae...   125   5e-28
UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus ...   124   1e-27
UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW   106   2e-22
UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2...   105   3e-22
UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacter...   100   1e-20
UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae ...    95   8e-19
UniRef50_A2R5F8 Remark: it is assumed (Fragment) n=1 Tax=Aspergi...    93   3e-18
UniRef50_B9NSM4 Exodeoxyribonuclease I n=1 Tax=Rhodobacteraceae ...    92   8e-18
UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3X...    91   1e-17

Sequences not found previously or not previously below threshold:

UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL...    77   2e-13
UniRef50_Q07NS2 Exodeoxyribonuclease I subunit C n=5 Tax=Alphapr...    66   3e-10
UniRef50_A1ZTJ0 Exodeoxyribonuclease I, putative n=1 Tax=Microsc...    63   3e-09
UniRef50_D0RRC0 Exodeoxyribonuclease I n=1 Tax=alpha proteobacte...    61   1e-08
UniRef50_A5IXK4 DNA polymerase III alpha subunit n=1 Tax=Mycopla...    52   7e-06
UniRef50_A2SRZ3 Exonuclease, RNase T and DNA polymerase III n=1 ...    51   1e-05
UniRef50_Q6KIN3 DNA polymerase III alpha subunit n=1 Tax=Mycopla...    50   2e-05
UniRef50_UPI0001693F5B Exonuclease RNase T and DNA polymerase II...    49   4e-05
UniRef50_C7H6D8 DNA polymerase III, alpha subunit n=4 Tax=Clostr...    49   4e-05
UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC21...    47   2e-04
UniRef50_A5UUT9 DNA polymerase III, epsilon subunit n=4 Tax=Chlo...    47   2e-04
UniRef50_B3PN84 DNA polymerase III subunit alpha n=2 Tax=Mycopla...    47   2e-04
UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pedic...    47   2e-04
UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7...    46   3e-04
UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei Re...    46   3e-04
UniRef50_A4GJC0 Exodeoxyribonuclease I n=1 Tax=uncultured marine...    46   4e-04
UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae...    46   4e-04
UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms Re...    46   4e-04
UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenel...    46   5e-04
UniRef50_D1N2X3 DNA polymerase III, epsilon subunit n=1 Tax=Vict...    45   7e-04
UniRef50_C7G6P2 DNA polymerase III PolC-type n=1 Tax=Roseburia i...    45   7e-04
UniRef50_C2BLZ4 DNA polymerase III subunit epsilon n=6 Tax=Coryn...    45   0.001
UniRef50_B5ZV55 DNA polymerase III, epsilon subunit n=23 Tax=Alp...    45   0.001
UniRef50_C1TRP3 Exonuclease, DNA polymerase III, epsilon subunit...    44   0.001
UniRef50_Q47TJ3 DNA polymerase III, epsilon subunit n=10 Tax=Act...    44   0.001
UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD3...    44   0.001
UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Eutele...    44   0.002
UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group...    44   0.002
UniRef50_C1AA06 Exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27...    43   0.002
UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 ...    43   0.003
UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha ...    43   0.003
UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 ...    43   0.003
UniRef50_A1K872 DNA polymerase III epsilon chain-like protein n=...    43   0.003
UniRef50_A1VGE3 Exonuclease, RNase T and DNA polymerase III n=4 ...    43   0.003
UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms Re...    43   0.004
UniRef50_B8L493 Exonuclease n=1 Tax=Stenotrophomonas sp. SKA14 R...    43   0.004
UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma...    43   0.004
UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=...    42   0.005
UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogac...    42   0.005
UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=...    42   0.005
UniRef50_A7B402 Putative uncharacterized protein n=1 Tax=Ruminoc...    42   0.005
UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun seq...    42   0.006
UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Para...    42   0.007
UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria R...    42   0.007
UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria R...    41   0.008
UniRef50_Q2Q0H1 Putative DNA polymerase type III, exonuclease do...    41   0.008
UniRef50_UPI0001C31300 Exonuclease RNase T and DNA polymerase II...    41   0.009
UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Dein...    41   0.009
UniRef50_Q4FND4 Exodeoxyribonuclease I n=2 Tax=Candidatus Pelagi...    41   0.009
UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_...    41   0.012
UniRef50_B3T077 Putative exonuclease n=1 Tax=uncultured marine m...    41   0.012
UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlam...    41   0.013
UniRef50_P47277 DNA polymerase III polC-type n=2 Tax=Mycoplasma ...    41   0.015
UniRef50_C1FD33 Exonuclease and DNA helicase n=3 Tax=cellular or...    41   0.016
UniRef50_A5I1F6 Helicase, UvrD/REP/exonuclease family protein n=...    40   0.020
UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 2313...    40   0.022
UniRef50_Q2SSE0 DNA polymerase III, alpha subunit, Gram-positive...    40   0.023
UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces ja...    40   0.024
UniRef50_Q7NC15 PolC n=1 Tax=Mycoplasma gallisepticum RepID=Q7NC...    40   0.025
UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=...    40   0.025
UniRef50_B8GAH5 DNA polymerase III, epsilon subunit n=1 Tax=Chlo...    40   0.026
UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamyd...    40   0.027
UniRef50_Q6MGT7 DNA polymerase III alpha subunit n=1 Tax=Bdellov...    40   0.037
UniRef50_C1DKH9 DNA polymerase III, epsilon subunit n=17 Tax=Pse...    38   0.080
UniRef50_B0UN90 Exonuclease RNase T and DNA polymerase III n=3 T...    38   0.090

>UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteobacteria
          RepID=Q1QT40_CHRSD
          Length = 495

 Score =  158 bits (400), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/89 (68%), Positives = 68/89 (76%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M     +PTFL+HDYETFG  P  DRPAQFAAIRTDS+FN +GEP  FYCKPADD+LP P
Sbjct: 1  MAQGKTEPTFLWHDYETFGADPRRDRPAQFAAIRTDSDFNPVGEPMTFYCKPADDFLPHP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARIHS 89
           A LITGITPQ AR +G  E  FAARIH+
Sbjct: 61 QACLITGITPQAARRRGLAEIEFAARIHA 89


>UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=EX1_ECOLI
          Length = 475

 Score =  156 bits (395), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 84/89 (94%), Positives = 85/89 (95%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M D  +Q TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP
Sbjct: 2  MNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 61

Query: 61 GAVLITGITPQEARAKGENEAAFAARIHS 89
          GAVLITGITPQEARAKGENEAAFAARIHS
Sbjct: 62 GAVLITGITPQEARAKGENEAAFAARIHS 90


>UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacteria
          RepID=Q483M2_COLP3
          Length = 487

 Score =  155 bits (393), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/87 (59%), Positives = 69/87 (79%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          +  +QP+ L+HDYET+G +P  D+P+QFA IRTD + N+IGEPE+FYC P  DYLP P A
Sbjct: 8  NNTEQPSILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVDYLPHPEA 67

Query: 63 VLITGITPQEARAKGENEAAFAARIHS 89
           L+TGITPQ+A+ +G +EA FAARIH+
Sbjct: 68 CLVTGITPQKAQREGLSEAEFAARIHT 94


>UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammaproteobacteria
          RepID=Q21I25_SACD2
          Length = 485

 Score =  152 bits (385), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 48/83 (57%), Positives = 60/83 (72%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           Q TF +HDYET+G +PA+DRP+QFA +RTD + N+IGEP V YCKP +D  P P A L+
Sbjct: 1  MQKTFYWHDYETWGANPAVDRPSQFAGVRTDMDLNIIGEPLVIYCKPPEDIWPNPEACLV 60

Query: 66 TGITPQEARAKGENEAAFAARIH 88
          TG+TPQE  AKG  E  F  +IH
Sbjct: 61 TGLTPQETLAKGVTEREFIKQIH 83


>UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID=B0BNV2_ACTPJ
          Length = 514

 Score =  151 bits (383), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 56/85 (65%), Positives = 67/85 (78%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          +K  TF F+DYE+FG  PALDRPAQFA IRTDS+FN+IGEP +FYCK   DYLP P AV+
Sbjct: 2  NKNLTFFFYDYESFGVSPALDRPAQFAGIRTDSDFNIIGEPVMFYCKQTPDYLPSPEAVM 61

Query: 65 ITGITPQEARAKGENEAAFAARIHS 89
          +TGITPQ+  A+G  E  FAARIH+
Sbjct: 62 VTGITPQQCNAEGVPEPEFAARIHA 86


>UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellular organisms
          RepID=Q21WQ6_RHOFD
          Length = 485

 Score =  149 bits (377), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/87 (63%), Positives = 63/87 (72%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          MT +    TFL+HDYETFGT+   DRPAQFAAIRTD+E NVIG P + YC+PA D+LP P
Sbjct: 1  MTPSPSHHTFLWHDYETFGTNTRRDRPAQFAAIRTDAELNVIGAPLMLYCQPAGDFLPDP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARI 87
           A LITGITPQ    KG  E  FAA+I
Sbjct: 61 QACLITGITPQLCLEKGIPEYQFAAQI 87


>UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria
          RepID=A4ADV7_9GAMM
          Length = 482

 Score =  143 bits (361), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 57/82 (69%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             TF +HDYETFG  PA DRP+QFA +RTD + N+IGEP V Y +P  DY+P P A LI
Sbjct: 3  SSETFYWHDYETFGVDPAYDRPSQFAGLRTDLDLNLIGEPLVIYAQPPRDYVPHPDACLI 62

Query: 66 TGITPQEARAKGENEAAFAARI 87
          TGITPQ A A+G  EA F + I
Sbjct: 63 TGITPQTALAEGVVEAQFMSTI 84


>UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus capsulatus
          RepID=Q605A2_METCA
          Length = 478

 Score =  142 bits (359), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 49/82 (59%), Positives = 59/82 (71%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
           P+F ++D ETFGT PA DR AQFA +RTD EFN IG P+V YC+P+DD +P P A L+T
Sbjct: 4  APSFYWYDLETFGTDPARDRIAQFAGLRTDLEFNPIGPPDVLYCRPSDDMVPYPDACLVT 63

Query: 67 GITPQEARAKGENEAAFAARIH 88
          GITPQ A   G  E+AF A IH
Sbjct: 64 GITPQYAAELGVPESAFIATIH 85


>UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinelandii DJ
          RepID=C1DSN1_AZOVD
          Length = 476

 Score =  141 bits (357), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 41/84 (48%), Positives = 51/84 (60%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             +  ++DYET G +P  DRP Q A IRTD   N IG P   YC+PADD LP P A L+
Sbjct: 1  MTSSIFWYDYETTGINPRCDRPLQVAGIRTDEALNEIGAPLNLYCRPADDILPHPAACLV 60

Query: 66 TGITPQEARAKGENEAAFAARIHS 89
          TGITP+    +G  EA F  R+H+
Sbjct: 61 TGITPRLLAERGLCEAEFVTRLHA 84


>UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria
          RepID=B3PLL7_CELJU
          Length = 497

 Score =  141 bits (356), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 1/88 (1%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          MT T+ Q T  +HDYET+G  PA+DRP QFA +RTD + N++GEP   Y +PA D LP+P
Sbjct: 1  MTSTE-QITLYWHDYETWGESPAIDRPVQFAGVRTDLDLNILGEPLTIYARPAPDVLPKP 59

Query: 61 GAVLITGITPQEARAKGENEAAFAARIH 88
           A LITGITPQEA AKG +EA F A IH
Sbjct: 60 EACLITGITPQEAEAKGVSEADFIAAIH 87


>UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales
          RepID=A6VXX3_MARMS
          Length = 484

 Score =  141 bits (355), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 45/81 (55%), Positives = 58/81 (71%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +F + D+ET GT PA DRP QFA IRTD +FN IGEP +FYC+ A+D LPQP A L+TGI
Sbjct: 8  SFFWFDFETTGTDPARDRPMQFAGIRTDLDFNPIGEPIMFYCRLAEDVLPQPEACLLTGI 67

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +PQ+A  +G  EA F   + +
Sbjct: 68 SPQDANREGLCEAEFMQAVEA 88


>UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitrosomonas
          RepID=Q0AEW3_NITEC
          Length = 486

 Score =  141 bits (355), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 46/81 (56%), Positives = 53/81 (65%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          T  +HDYET G +P  DRP QFA +RTD   N IG+P V YCKPA D LP P A L+TGI
Sbjct: 7  TLYWHDYETSGANPRQDRPVQFAGLRTDEALNEIGDPLVIYCKPARDRLPHPEACLLTGI 66

Query: 69 TPQEARAKGENEAAFAARIHS 89
          TPQ A  +G  E  F A IH+
Sbjct: 67 TPQMAATRGLPEPEFIALIHA 87


>UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacterium NOR5-3
          RepID=B8KPJ8_9GAMM
          Length = 482

 Score =  140 bits (354), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 48/82 (58%), Positives = 52/82 (63%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             T  +HDYETFG  P  DRPAQFA +RTD + N IGEP V Y KP  DY+P P A LI
Sbjct: 3  SSETLYWHDYETFGVDPGYDRPAQFAGLRTDLDLNPIGEPLVLYAKPPRDYVPHPDACLI 62

Query: 66 TGITPQEARAKGENEAAFAARI 87
          TGITPQ A A G  EA F   I
Sbjct: 63 TGITPQAALAAGVPEADFIKAI 84


>UniRef50_P57620 Exodeoxyribonuclease I n=2 Tax=Buchnera aphidicola (Acyrthosiphon
          pisum) RepID=EX1_BUCAI
          Length = 413

 Score =  139 bits (351), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/84 (60%), Positives = 61/84 (72%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
           K P FLF+DYETFG H ALD+PAQFA IRTD   N+I +P+ FYC P+DDYLP PG+VL
Sbjct: 6  KKTPNFLFYDYETFGIHTALDKPAQFACIRTDINLNIIDDPQYFYCFPSDDYLPDPGSVL 65

Query: 65 ITGITPQEARAKGENEAAFAARIH 88
          IT ITPQ     G NE  F+ +I+
Sbjct: 66 ITHITPQYTEKNGTNEYNFSQKIY 89


>UniRef50_A3WL65 Exonuclease I n=2 Tax=Idiomarina RepID=A3WL65_9GAMM
          Length = 486

 Score =  139 bits (350), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/85 (55%), Positives = 57/85 (67%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          +   QPTF +HDYET+G  P +DRPAQFA +RT  +F  +G P   Y +P  D+LP P A
Sbjct: 7  NNKNQPTFYWHDYETWGARPLIDRPAQFAGMRTTLDFQPVGRPLTIYAQPTPDFLPDPEA 66

Query: 63 VLITGITPQEARAKGENEAAFAARI 87
          VLITGITPQ A  +G NEA FA  I
Sbjct: 67 VLITGITPQYALNQGVNEANFAQAI 91


>UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepID=Q4K7B4_PSEF5
          Length = 497

 Score =  139 bits (350), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           +  ++DYET G +P  DRP Q A IRTD   N I EP   YC+P+DD LP P A +ITGI
Sbjct: 25  SLFWYDYETTGINPRCDRPLQVAGIRTDLALNEIDEPVNLYCQPSDDILPHPMACMITGI 84

Query: 69  TPQEARAKGENEAAFAARIH 88
           TP     +G  EA F  R+H
Sbjct: 85  TPGRLAEQGLGEADFMTRVH 104


>UniRef50_Q8K923 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola (Schizaphis
          graminum) RepID=EX1_BUCAP
          Length = 482

 Score =  138 bits (349), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/84 (55%), Positives = 62/84 (73%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
            +  FLF+DYETFG H +LD+PAQF++IRTD  FN++ EP+ FYC P+DDYLP P ++L
Sbjct: 7  KNEVNFLFYDYETFGIHTSLDKPAQFSSIRTDKNFNIMEEPKCFYCFPSDDYLPDPSSIL 66

Query: 65 ITGITPQEARAKGENEAAFAARIH 88
          ITGITP+     G NE  F+ +IH
Sbjct: 67 ITGITPEYTEKHGFNEYKFSKKIH 90


>UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacteria
          RepID=A5CVQ8_VESOH
          Length = 473

 Score =  135 bits (341), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           TF ++DYETFG  P +DR +QFA IRTD  FN++ E ++FYCKP +D L  P   LITG
Sbjct: 2  KTFYWYDYETFGISPKIDRISQFAGIRTDENFNILDE-QMFYCKPTNDCLLSPETCLITG 60

Query: 68 ITPQEARAKGENEAAFAARIHS 89
          I+PQ    KG  E  F  +IH+
Sbjct: 61 ISPQLCEQKGMIEHKFIKKIHA 82


>UniRef50_Q89A43 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola (Baizongia
          pistaciae) RepID=EX1_BUCBP
          Length = 481

 Score =  135 bits (340), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/87 (51%), Positives = 62/87 (71%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
            +   TFLF+DYETFG +PALD+P+QF+ I+TD +FN+IG  +  +C P+ DYLP P +
Sbjct: 4  QKNTSLTFLFYDYETFGKNPALDKPSQFSCIQTDIDFNIIGSIQEIFCYPSVDYLPDPES 63

Query: 63 VLITGITPQEARAKGENEAAFAARIHS 89
          VLITGI+P+     G NE  FA +I+S
Sbjct: 64 VLITGISPKYTSLFGVNEFEFAKKIYS 90


>UniRef50_Q7VQX2 Exodeoxyribonuclease I n=2 Tax=Candidatus Blochmannia
          RepID=Q7VQX2_BLOFL
          Length = 501

 Score =  134 bits (337), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/87 (52%), Positives = 61/87 (70%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M    K+PTFL +DYETFG +PALDRPAQFA+IR ++    + + EVF+C+  +DYLP P
Sbjct: 1  MLSNIKKPTFLIYDYETFGLNPALDRPAQFASIRVNNSLCPVEKKEVFFCQIPNDYLPNP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARI 87
           +VLITGITP +  + G  E  FA +I
Sbjct: 61 ESVLITGITPYDTLSNGLLEPQFAYQI 87


>UniRef50_C6XFI1 Exonuclease I n=1 Tax=Candidatus Liberibacter asiaticus str.
          psy62 RepID=C6XFI1_LIBAP
          Length = 471

 Score =  133 bits (335), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/79 (62%), Positives = 57/79 (72%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+ +DYETFG   ALDRPAQFA +R D ++  I   EVF+CKPADDYLP P AV ITGIT
Sbjct: 5  FVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFITGIT 64

Query: 70 PQEARAKGENEAAFAARIH 88
          PQ+A   G  EA F+ RIH
Sbjct: 65 PQKALRDGVVEAEFSRRIH 83


>UniRef50_Q056Y2 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola str. Cc
          (Cinara cedri) RepID=Q056Y2_BUCCC
          Length = 475

 Score =  129 bits (325), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 54/88 (61%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M +   +   +F+DYETFG + ALD+ +QF +I TD++F+ I +  + +C P  DYLP P
Sbjct: 1  MCEYFSKKKIIFYDYETFGKNVALDKVSQFCSIETDNKFSYIIKKTILFCYPPIDYLPDP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARIH 88
           A+LIT I PQ     G NE   + +IH
Sbjct: 61 EAILITKILPQYTYKYGLNEYFLSKKIH 88


>UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate division TM7
          RepID=A5KSP8_9BACT
          Length = 476

 Score =  129 bits (324), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 47/85 (55%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          D   TF F+D ET G  P  DR  QFA  RT  + + IGEP     +  DD LP P AV+
Sbjct: 4  DMAETFFFYDLETSGLDPRRDRIMQFAGQRTTMDLDPIGEPFNILVRLNDDVLPSPDAVM 63

Query: 65 ITGITPQEARAKGENEAAFAARIHS 89
          +TGITPQ+   +G  EA F    H+
Sbjct: 64 VTGITPQKTHEEGIAEAEFIKLFHN 88


>UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacterales bacterium HTCC2255
          RepID=UPI0000E0E98F
          Length = 488

 Score =  129 bits (324), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/80 (55%), Positives = 49/80 (61%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLFHDYET+G  P  D P QFAAIRTD       EP     K   DYLP P AVL+TGI
Sbjct: 7  SFLFHDYETWGISPQHDYPCQFAAIRTDENLQQCDEPINITAKIHLDYLPHPQAVLVTGI 66

Query: 69 TPQEARAKGENEAAFAARIH 88
          TPQ   A+GE E  F  +IH
Sbjct: 67 TPQMTLAEGEYEYTFMQKIH 86


>UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas
          RepID=B4SPA5_STRM5
          Length = 479

 Score =  128 bits (322), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/80 (53%), Positives = 56/80 (70%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D ETFG  P   R +Q+AAIRTD++ N I  P  F+ +PADD LP P A L+TGI
Sbjct: 4  SFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLPSPMATLVTGI 63

Query: 69 TPQEARAKGENEAAFAARIH 88
          TPQ+A A+G +EA    RI+
Sbjct: 64 TPQQALAEGISEAEAFDRIN 83


>UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xanthomonas
          albilineans RepID=D2UDX2_XANAL
          Length = 492

 Score =  127 bits (320), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/79 (59%), Positives = 55/79 (69%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D ETFG  P   R AQFAA+RTD+  N I EP  F+ +PADD LP P A LITGI
Sbjct: 17 SFLFYDLETFGADPRRTRIAQFAAVRTDAALNQIEEPISFFVQPADDLLPSPVATLITGI 76

Query: 69 TPQEARAKGENEAAFAARI 87
          TPQ+A  +G NEA   ARI
Sbjct: 77 TPQQALREGINEADAFARI 95


>UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=Reinekea
          blandensis MED297 RepID=A4BJV3_9GAMM
          Length = 517

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 57/88 (64%)

Query: 2  TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           +    P++L++DYET+GT P+ DR AQFAA+RTD + N+I EP   +CKP  D +  PG
Sbjct: 3  NNATHPPSYLWYDYETWGTVPSRDRIAQFAAVRTDMDLNIIEEPINLFCKPDIDTVIDPG 62

Query: 62 AVLITGITPQEARAKGENEAAFAARIHS 89
          AV IT ++P E    G +E  F+  +H+
Sbjct: 63 AVQITRLSPLELEQTGLSEWEFSQAVHN 90


>UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium HTCC2080
          RepID=A0Z9I3_9GAMM
          Length = 483

 Score =  125 bits (315), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/83 (51%), Positives = 55/83 (66%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             +F +HDYET G +   DRP QFA +RTD  FNVI EP V YC+P+ D L  P A+ +
Sbjct: 3  SSESFYWHDYETSGANVFEDRPLQFAGVRTDKNFNVISEPLVHYCRPSPDCLLHPAAIRV 62

Query: 66 TGITPQEARAKGENEAAFAARIH 88
          TGI+P +A A+G NE AF A+I 
Sbjct: 63 TGISPYKALAEGANEGAFMAKIQ 85


>UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae
          RepID=Q2P315_XANOM
          Length = 481

 Score =  125 bits (313), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/79 (54%), Positives = 53/79 (67%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D ETFG  P   R AQFAA+RTD++  VI EP  F+ +PADD LP P A ++T I
Sbjct: 4  SFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMVTAI 63

Query: 69 TPQEARAKGENEAAFAARI 87
          TPQ A  +G  EA   ARI
Sbjct: 64 TPQHALREGVTEAEAFARI 82


>UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus neapolitanus c2
          RepID=D0KZN4_HALNC
          Length = 495

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D+ET G+ P  DRP QFAA+RT+ E   I  P   Y   + + LP P AVL+TGI
Sbjct: 2  SFLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLVTGI 61

Query: 69 TPQE-ARAKGENEAAFAARIHS 89
           PQ  A + G  EA FAA IH+
Sbjct: 62 LPQTLASSGGRPEAEFAALIHA 83


>UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW
          Length = 482

 Score =  106 bits (266), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
              T LF+D ET G + + D+  QFAAIRTD +FN I E   F+ K   D  P P A +
Sbjct: 2  FSNQTLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEI-ERFNFFVKLNPDTTPSPMATI 60

Query: 65 ITGITPQEARAKGENEAAFAARIHS 89
             I+  +A   G  E     +IH 
Sbjct: 61 THHISIAQANT-GIAEYQAIRKIHK 84


>UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2
          RepID=C0QKN8_DESAH
          Length = 471

 Score =  105 bits (263), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           TFLF+D ET G +PA D+   FAAIRTD E   I    +      +D +P PGA +   
Sbjct: 2  KTFLFYDIETSGLNPAFDQILTFAAIRTDLELREIDRTSIV-ISLRNDIVPSPGAFITHR 60

Query: 68 ITPQEARAKGENEAAFAARIH 88
          +TP++    G  E    A IH
Sbjct: 61 LTPED-LKDGLCEYQGVALIH 80


>UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacteria
          RepID=B6J811_COXB1
          Length = 458

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          ++ + T+LF+D ET G +   D+  QFAAIRTD   N +   E+   +   D +P P A+
Sbjct: 2  SNHRKTYLFYDLETTGLNKCFDQIIQFAAIRTDEALNELNRHEIL-IRLNPDVIPSPEAM 60

Query: 64 LITGITPQEARAKGENEAAFAARIH 88
          +I   +  +  + G+ E      IH
Sbjct: 61 IIHRFSIDQMLS-GKAEIEAIREIH 84


>UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae
          RepID=B5K7E4_9RHOB
          Length = 500

 Score = 94.6 bits (234), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G  PA D+P QFAAI TD  F          C+ A   LP P A+++T +T
Sbjct: 3  FVFYDLETTGLSPAFDQPLQFAAIYTDENFVEKDR-VNIRCRLAPHILPSPQALVVTRVT 61

Query: 70 PQEARAKGENE-AAFAARI 87
          P +           F+ ++
Sbjct: 62 PDQLTDPSLPSLFEFSQQV 80


>UniRef50_A2R5F8 Remark: it is assumed (Fragment) n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2R5F8_ASPNC
          Length = 298

 Score = 92.7 bits (229), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/52 (100%), Positives = 52/52 (100%)

Query: 38  EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS 89
           EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS
Sbjct: 124 EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS 175


>UniRef50_B9NSM4 Exodeoxyribonuclease I n=1 Tax=Rhodobacteraceae bacterium KLH11
          RepID=B9NSM4_9RHOB
          Length = 469

 Score = 91.5 bits (226), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F F D ET GT PA D+P QFA I TD     + E     C+ +   LP P A+ +TG++
Sbjct: 2  FAFFDLETSGTSPAFDQPLQFAGILTDDTLEEV-ERIDIRCRLSPHILPAPWALAVTGVS 60

Query: 70 PQEARAKGENEA-AFAARIHS 89
          P          A  F+  + S
Sbjct: 61 PGMLSNPNLPSAFEFSQEVSS 81


>UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3XEM3_9RHOB
          Length = 459

 Score = 90.7 bits (224), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G  P  D+P QFAAI TD  F          C+ A   LP P A+++T +T
Sbjct: 3  FVFYDLETTGISPEFDQPLQFAAIWTDENFVEKDR-VNIRCRLAPHILPSPQALVVTRVT 61

Query: 70 PQEARAKGENE-AAFAARI 87
          P +           F+ ++
Sbjct: 62 PDQLIDPSLPSLFEFSQQV 80


>UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL3
          RepID=B4WCZ9_9CAUL
          Length = 476

 Score = 76.9 bits (188), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G     D+  QFAAI TD + N +       C+     +P P A+L   ++
Sbjct: 3  FVFYDTETTGLSKGFDQIVQFAAIHTDGDLNELDR-FELRCRLQPHVVPHPKAMLANRLS 61

Query: 70 PQEARAKGEN-EAAFAARI 87
           +                I
Sbjct: 62 IERLTDLSLPSHYDMVREI 80


>UniRef50_Q07NS2 Exodeoxyribonuclease I subunit C n=5 Tax=Alphaproteobacteria
          RepID=Q07NS2_RHOP5
          Length = 490

 Score = 66.5 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F D ET G     D+   FAAIRTD++ N          +     +P P A+    ++
Sbjct: 3  FVFFDTETTGLRHGFDQIVHFAAIRTDNDLNETDR-FEVRSRLLPHVVPHPSALRTNRLS 61

Query: 70 PQEARAKGEN-EAAFAARIH 88
           +                I 
Sbjct: 62 IERLIDGTLPSHYEMVRAIQ 81


>UniRef50_A1ZTJ0 Exodeoxyribonuclease I, putative n=1 Tax=Microscilla marina ATCC
          23134 RepID=A1ZTJ0_9SPHI
          Length = 487

 Score = 62.6 bits (151), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
          K    +F+D  + G +P  D+  +     TD  FN++        K   D +P P A++ 
Sbjct: 19 KNKNLVFYDTRSSGDNPVFDQILRADTYVTDHAFNLLETH-HIEIKKRPDVVPSPEALIA 77

Query: 66 TGITPQEARAKGENEAAFAARIH 88
              P +  AKG  E      IH
Sbjct: 78 NNWLPSD-LAKGSTEYEAMRHIH 99


>UniRef50_D0RRC0 Exodeoxyribonuclease I n=1 Tax=alpha proteobacterium HIMB114
          RepID=D0RRC0_9RICK
          Length = 473

 Score = 60.7 bits (146), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           ++F+D+ET G     D+  Q  AI  +  F+++       C      +P+PGA+L+   
Sbjct: 2  NYVFYDFETTGRSSTWDQIIQVGAILVNDTFDILDR-FEARCSLKPGTVPEPGALLVNKT 60

Query: 69 TPQEARAKGEN 79
          TP   +    +
Sbjct: 61 TPDMLKKTNLS 71


>UniRef50_A5IXK4 DNA polymerase III alpha subunit n=1 Tax=Mycoplasma agalactiae PG2
           RepID=A5IXK4_MYCAP
          Length = 1459

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 4   TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
             K  +++  D ET G  P      +F A+  + +   +GE   F+ KP           
Sbjct: 419 NFKDYSYVSFDIETTGLSPKFHEIIEFGAVDINQDL-KVGEVTQFFIKPQAKI--GAFTT 475

Query: 64  LITGITPQEARAKGENEAAFAARIH 88
            +TGIT Q   ++G +      RI+
Sbjct: 476 ELTGITQQMLDSEGLSIKDGLQRIY 500


>UniRef50_A2SRZ3 Exonuclease, RNase T and DNA polymerase III n=1
          Tax=Methanocorpusculum labreanum Z RepID=A2SRZ3_METLZ
          Length = 228

 Score = 51.1 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDS--EFNVIGEPEVFYCKPADDYLPQPGAVL-ITG 67
          L  D ET G +P +DR  + AAI+ D     +V+ E    Y    +D    P  V  +TG
Sbjct: 2  LIVDTETTGLNPKIDRITELAAIKFDKYGNKSVMDE----YISLPNDIC-YPENVQEMTG 56

Query: 68 ITPQEARAKGENEAAFA 84
          ITP+    KG  E   A
Sbjct: 57 ITPEILELKGHPEEEIA 73


>UniRef50_Q6KIN3 DNA polymerase III alpha subunit n=1 Tax=Mycoplasma mobile
           RepID=Q6KIN3_MYCMO
          Length = 1433

 Score = 50.3 bits (119), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFN-VIGEPEVFYCKPADDYLPQPGAVL 64
           K  T++  D ET G  P  D   +F A +     N  + +   F+ KP  +        L
Sbjct: 396 KNETYVVFDLETTGLSPIFDDIIEFGAQKI---LNGKVIDTLQFFVKPNKEI--SEKITL 450

Query: 65  ITGITPQEARAKGENEAAFAARI 87
           ITGI  Q+      +E     +I
Sbjct: 451 ITGIKNQDV-ENAISEKEALKKI 472


>UniRef50_UPI0001693F5B Exonuclease RNase T and DNA polymerase III n=3 Tax=Paenibacillus
          larvae subsp. larvae BRL-230010 RepID=UPI0001693F5B
          Length = 203

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           +  +   D ET G  P  D+  + AAIRTD      G                P  V +
Sbjct: 1  MREIYTVFDLETTGLDPTKDQITEIAAIRTDL-IREYGR-LDIRITKNSGTKLTPEIVNL 58

Query: 66 TGITPQEARAKGENEAAFA 84
          TGI+ +     G  E    
Sbjct: 59 TGIS-ESMMRGGVPEPVAI 76


>UniRef50_C7H6D8 DNA polymerase III, alpha subunit n=4 Tax=Clostridiales
          RepID=C7H6D8_9FIRM
          Length = 244

 Score = 49.1 bits (116), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSE----FNVIGEPEVFYCKPADDYLPQPG 61
          K    +F D ET G      +  + AAIR +        +    +VF   P  + +PQ  
Sbjct: 10 KYKAVVFFDTETTGLEAESCQIIELAAIRVEKTERGTLRMADSADVFVKLPEGERIPQ-K 68

Query: 62 AVLITGITPQEARAKGENEAAFAARI 87
           V +TGIT ++   +G  EA  AAR 
Sbjct: 69 IVELTGITDEQLENEGITEAEAAARF 94


>UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC2155
          RepID=A6DIP6_9BACT
          Length = 261

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          + Q   +F D ET G +P  DR  +   I+   +    G+ ++   +   +      A  
Sbjct: 4  NLQRPIVFFDLETTGLNPTEDRIIEICCIKVHPD----GKRDIKTRRVNPEKPISSEASE 59

Query: 65 ITGITPQEARAK 76
          ITGIT ++ + +
Sbjct: 60 ITGITDEDVKDE 71


>UniRef50_A5UUT9 DNA polymerase III, epsilon subunit n=4 Tax=Chloroflexaceae
           RepID=A5UUT9_ROSS1
          Length = 233

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 14  DYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEA 73
           D ET G +P  D       +  D     + +      +P DD    P A+ + G+ PQ+ 
Sbjct: 42  DVETTGLNPRRDALLAIGLVDIDDGRIRMDQRWYTLVRPPDDAPVNPEAIRVHGLLPQDV 101

Query: 74  RA 75
             
Sbjct: 102 EQ 103


>UniRef50_B3PN84 DNA polymerase III subunit alpha n=2 Tax=Mycoplasma
           RepID=B3PN84_MYCA5
          Length = 1438

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQF-AAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
              T++  D ET G  P  +   +F A+I    E  +I E   F+ KP     P      
Sbjct: 401 SSQTYVVFDLETTGLSPRFNEIIEFGASI---IENGIIKESHQFFIKPTKPIPPS--ITE 455

Query: 65  ITGITPQEARAKGENEAAFAARIH 88
           IT IT     A G ++     +I+
Sbjct: 456 ITKIT-DNTVANGYSQEEGVRKIY 478


>UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pediculus humanus corporis
          RepID=UPI000186E428
          Length = 196

 Score = 46.8 bits (110), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ-PGAVLITG 67
          +++ D E  G +P  D   + A I T+ + N + E   F     D+ L       L+  
Sbjct: 23 YIWIDLEMTGLNPETDTILEVACIITEPDLNPLNEGMHFVIHQNDNVLKSMNEWCLVHH 81


>UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7
          RepID=A5KRR8_9BACT
          Length = 184

 Score = 46.4 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 2  TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVI 42
           D  K    L+ D E  G  P  DR  + AAI TD  F  +
Sbjct: 5  ADMKKHAKLLWLDLEMTGLDPQRDRVLEVAAIATDWNFEEM 45


>UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei RepID=ORN_TROWT
          Length = 184

 Score = 46.1 bits (108), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M         ++ D E  G +P  D   + A + TD +   + E       P+ + L   
Sbjct: 1  MCVAPTPSHLVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAM 60

Query: 61 GAVL-----ITGITPQEARAKGENEAAFAAR 86
             +     ++G+  + +     +EA    +
Sbjct: 61 DNYVARMHRVSGLLDELSNGVPVSEAQAMVK 91


>UniRef50_A4GJC0 Exodeoxyribonuclease I n=1 Tax=uncultured marine bacterium
          EB0_49D07 RepID=A4GJC0_9BACT
          Length = 469

 Score = 46.1 bits (108), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
            +F+D ET G      +  Q  +I+T+    ++ E +   C P    +P P A++    
Sbjct: 6  NLIFYDTETTGLLKDFSQILQCGSIQTNRSLEILHE-QNLGCAPLPWAIPYPMAMVTNKK 64

Query: 69 T 69
          T
Sbjct: 65 T 65


>UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae 22.4-21
          RepID=A4NXF4_HAEIN
          Length = 115

 Score = 45.7 bits (107), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          +  +   ++ D E  G  P  +R  + A I TD   N++ E  V     +D+ L
Sbjct: 2  SFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELL 55


>UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms RepID=ORN_HAEIG
          Length = 182

 Score = 45.7 bits (107), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          +  +   ++ D E  G  P  +R  + A I TD   N++ E  V     +D+ L
Sbjct: 2  SFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELL 55


>UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
           23834 RepID=C0DYM7_EIKCO
          Length = 238

 Score = 45.7 bits (107), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           T         + D E  G +P  DR  + A + TD++ N++ + E +    +D+ L    
Sbjct: 46  TPKPNPLNLCWLDMEMTGLNPEHDRIIEAAVVITDADLNILAQSESYAIHQSDELLEGMD 105

Query: 62  AVLI-----TGITPQEARAKGENEAAFAARI 87
           A        TG+T Q  +    +EA    R+
Sbjct: 106 AWNTSTHERTGLT-QRVKDSTLSEAEVEQRL 135


>UniRef50_D1N2X3 DNA polymerase III, epsilon subunit n=1 Tax=Victivallis vadensis
          ATCC BAA-548 RepID=D1N2X3_9BACT
          Length = 185

 Score = 45.3 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F   D ET G  P  DR  + AA+R D +    G    F             AV +  IT
Sbjct: 9  FTIFDVETTGMSPVRDRIVELAAVRVDRD----GSLSRFQSLVNPGVRIPAQAVAVHHIT 64

Query: 70 PQE 72
             
Sbjct: 65 DDM 67


>UniRef50_C7G6P2 DNA polymerase III PolC-type n=1 Tax=Roseburia intestinalis L1-82
          RepID=C7G6P2_9FIRM
          Length = 228

 Score = 44.9 bits (105), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             +F D ET G  P  D+  + AA       N I      +CK  +        V +T 
Sbjct: 5  KKIVFFDTETTGLDPEKDQIIELAAALVTE--NGIELKIDAFCKLPEGEKIPEKIVELTH 62

Query: 68 ITPQEARAKGE 78
          IT      KG 
Sbjct: 63 ITDDMLADKGI 73


>UniRef50_C2BLZ4 DNA polymerase III subunit epsilon n=6 Tax=Corynebacterium
          RepID=C2BLZ4_9CORY
          Length = 221

 Score = 44.5 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGE 44
          T  +P F   D ET G +   DR  + AA+R DS FN I  
Sbjct: 15 TPGEPVFAVIDTETTGFNKRYDRIIELAAVRADSHFNPIDS 55


>UniRef50_B5ZV55 DNA polymerase III, epsilon subunit n=23 Tax=Alphaproteobacteria
          RepID=B5ZV55_RHILW
          Length = 245

 Score = 44.5 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          +  D ET G     DR  +   I   + F   G     Y  P D  +  P A+ + GIT 
Sbjct: 4  IIFDTETTGLDNRADRIIEIGGIELFNHF-PTGNVIHIYINPGDQKV-HPDALAVHGITD 61

Query: 71 QEARAK 76
          +  + K
Sbjct: 62 EFLKDK 67


>UniRef50_C1TRP3 Exonuclease, DNA polymerase III, epsilon subunit family n=1
          Tax=Dethiosulfovibrio peptidovorans DSM 11002
          RepID=C1TRP3_9BACT
          Length = 193

 Score = 44.1 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M  +     F+  D ET G     DR  +  AIR    F    E E F    +       
Sbjct: 1  MDKSLWDSGFVAIDVETTGLSNRWDRIVEIGAIR----FTPGSETESFQTFVSPGRPIPS 56

Query: 61 GAVLITGITPQEAR-AKGENEAAFA 84
           AV I GIT +    A G +EA+ A
Sbjct: 57 EAVAIHGITDEMVEGAPGLSEASIA 81


>UniRef50_Q47TJ3 DNA polymerase III, epsilon subunit n=10 Tax=Actinomycetales
          RepID=Q47TJ3_THEFY
          Length = 250

 Score = 44.1 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 26/75 (34%), Gaps = 3/75 (4%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
           D ET G +   DR    A I T ++ +                   P AV I GI+ + 
Sbjct: 19 FDIETTGINLEQDRVVTAAIIETAADGSQRTRRTWL---VNPGVEIPPEAVAIHGISTEL 75

Query: 73 ARAKGENEAAFAARI 87
          A A G       A I
Sbjct: 76 AVADGIPAPVAVAEI 90


>UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD30_ANOGA
          Length = 228

 Score = 44.1 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          M++T  Q   ++ D E  G     DR  + A I TDS+ N+I +         D  L
Sbjct: 38 MSETSVQ-NLVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVL 93


>UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Euteleostomi
          RepID=ORN_HUMAN
          Length = 237

 Score = 43.8 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          ++ D E  G     D+  + A + TDS+ N++ E      K  D+ L
Sbjct: 44 VWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELL 90


>UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group
          RepID=Q3B5G9_PELLD
          Length = 197

 Score = 43.8 bits (102), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             L+ D ET G  P      QFA +       V+ E      +P +  + +  A+ ++G
Sbjct: 2  KKVLWFDLETTGIDPDRHGIIQFAGLAEIE--GVVAESFEIKMQPHEGAMIEDEALAVSG 59

Query: 68 ITPQEARAKGENEAAFAARI 87
           + ++  +     A     I
Sbjct: 60 FSREQIASF-TPHAEAYKAI 78


>UniRef50_C1AA06 Exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA06_GEMAT
          Length = 323

 Score = 43.4 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 10/80 (12%)

Query: 14  DYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP------GAVLITG 67
           D ET G   A D   +F A+  D +    GE  V+   P   Y   P       A  ITG
Sbjct: 53  DVETTGLDTARDVIIEFGAVPFDFD----GEGRVYTVHPPLSYFEDPGRPIPAEASAITG 108

Query: 68  ITPQEARAKGENEAAFAARI 87
           IT  + R K  ++AA  A +
Sbjct: 109 ITDDDVRGKRIDDAAVLAAL 128


>UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia
          vitripennis RepID=UPI00015B53D6
          Length = 185

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 1  MTDTDKQPT--FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDY 56
          M  +  Q     ++ D E  G +   D+  + A+I TD + N++ +        ++D 
Sbjct: 1  MASSAVQKADRIIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDV 58


>UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha H16
           RepID=Q0JYK3_RALEH
          Length = 220

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL-ITGI 68
           F+  D ET G         +  AIR +   N     +V   KP+      P  +  +TGI
Sbjct: 52  FVVFDIETTGLDSERHEILEIGAIRVNRNSNNHDTFQVL-VKPSRKV---PKKITELTGI 107

Query: 69  TPQEARAKGEN 79
           TP+   A+G +
Sbjct: 108 TPEMIEAEGVS 118


>UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia
          vitripennis RepID=UPI00015B5BB5
          Length = 188

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          M++  ++   ++ D E  G     DR  + A + TD   N++ +        +DD L
Sbjct: 1  MSNNQRRNRIVWIDMEMTGLAVESDRILEVACLITDENLNIVSDEFHQVLHQSDDEL 57


>UniRef50_A1K872 DNA polymerase III epsilon chain-like protein n=3
           Tax=Betaproteobacteria RepID=A1K872_AZOSB
          Length = 734

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 17/84 (20%)

Query: 6   KQPTFLFHDYETFGTHPAL-DRPAQFAAIRT-------DSEFNVIGEPEVFYCKPADDYL 57
            + T+   D ET G +P+  D   Q  A+R           F  + +P    C+P  +  
Sbjct: 540 TELTYTVFDTETTGLNPSQGDEIIQIGAVRVLNGKPLRSEAFEQLIDP----CRPLPE-- 593

Query: 58  PQPGAVLITGITPQEARAKGENEA 81
               +  + GIT      +   EA
Sbjct: 594 ---ESARVHGITADMLAGQPVIEA 614


>UniRef50_A1VGE3 Exonuclease, RNase T and DNA polymerase III n=4 Tax=Desulfovibrio
           vulgaris RepID=A1VGE3_DESVV
          Length = 251

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 22/71 (30%), Gaps = 2/71 (2%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              TF+  D E  G  P  D     A +        I     F  K      P+  A+ +
Sbjct: 44  HAATFVVLDLEMTGLVPRRDAIIAVAGV--TMRGERILAGRCFEAKMRPHLPPEEDAIAV 101

Query: 66  TGITPQEARAK 76
            G+ P E    
Sbjct: 102 HGLLPDETATH 112


>UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms RepID=ORN_COLP3
          Length = 181

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP-- 58
          M   D     ++ D E  G  P  D   + A I TDSE N++ +  +F     DD L   
Sbjct: 1  MAGNDSN--LIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNM 58

Query: 59 QPGAVLITG 67
           P  +   G
Sbjct: 59 NPWCIEHHG 67


>UniRef50_B8L493 Exonuclease n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L493_9GAMM
          Length = 188

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 11/80 (13%)

Query: 10 FLFHDYETFGTHPALDRPA---------QFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
            F+D ET G  PA   P+         Q AA   ++    +        KP    +P+ 
Sbjct: 4  IFFYDTETTGL-PAFSEPSDAPHQPHLVQVAASLVNATTRKVISSIDVLVKPDGWTIPE- 61

Query: 61 GAVLITGITPQEARAKGENE 80
              I GIT ++A   G +E
Sbjct: 62 EVTRIHGITNEQAEQCGLDE 81


>UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma RepID=DPO3_UREPA
          Length = 1442

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
                 T++  D ET G  P  D   +F A+   +    IGE   F+ KP          
Sbjct: 402 QNLDNATYVIFDIETTGLFPNFDEIIEFGAVIMQNN-KQIGEKIQFFIKPIQQI--NENV 458

Query: 63  VLITGITPQEARAKGENEAAFAARI 87
             +T I+ QE      +E     +I
Sbjct: 459 TNLTNIS-QEMVNNAIDEKTALLKI 482


>UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=ORN_PSEA7
          Length = 180

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
            ++ D E  G  P  D   + A I TDS+ N + E  V      ++ L
Sbjct: 6  NLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVL 54


>UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogaceae
           RepID=DPO3_THEP1
          Length = 1367

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
            + +  TF+  D+ET G  P +D   +  A++   +  ++ E      KP+ +      +
Sbjct: 351 SSFENATFVVLDFETTGLDPQVDEIIEIGAVKI-QDGQIVDEYHTL-IKPSREI--SRRS 406

Query: 63  VLITGITPQEARAKGENE 80
             ITGIT +    K   E
Sbjct: 407 SEITGITQEMLENKRSIE 424


>UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=D1NUV9_9BIFI
          Length = 219

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ 59
          +T + +Q   ++ D E  G     D   + + + TD E NV+ E   F  KP+ D +  
Sbjct: 8  LTYSAQQSRLIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDEGIDFVIKPSKDAVDH 66


>UniRef50_A7B402 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC
           29149 RepID=A7B402_RUMGN
          Length = 300

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 13  HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
           +D ET G +P  D P     +  D +  VI E    Y +P +     P A  I GITP++
Sbjct: 137 YDLETTGVNPWKDEPLSMCIM--DLQGKVIFEH---YFRP-EHTKSWPDAAAIHGITPEK 190

Query: 73  ARAK 76
              +
Sbjct: 191 VANE 194


>UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun sequence. (Fragment)
          n=1 Tax=Tetraodon nigroviridis RepID=Q4SLB2_TETNG
          Length = 248

 Score = 41.8 bits (97), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          ++ D E  G     D+  + A + TDS+ N++ E         D+ L
Sbjct: 7  VWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELL 53


>UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1BAS5_PARDP
          Length = 659

 Score = 41.8 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 15/70 (21%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIR------TDSEFNVIGEPEVFYCKPADDYLPQPGA 62
           T +  D ET G  P  DR  Q A +R      T   F+ + +P     +P       P +
Sbjct: 452 TCVVFDTETTGLDPVADRIVQIAGLRIARGRLTGERFDTLVDPG----RPIP-----PAS 502

Query: 63  VLITGITPQE 72
             + GIT   
Sbjct: 503 TAVHGITDAM 512


>UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria RepID=ORN_FRAT1
          Length = 178

 Score = 41.8 bits (97), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
            ++ D E  G      +  + AAI TD + N+I E E       D+ L
Sbjct: 6  NLIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVL 54


>UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria RepID=ORN_THICR
          Length = 184

 Score = 41.4 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
            +   ++ D E  G     D+  + A + TD+E NV+ E  V   +    YL    A  
Sbjct: 2  KSENNLIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWC 61

Query: 65 ITG 67
           T 
Sbjct: 62 TTH 64


>UniRef50_Q2Q0H1 Putative DNA polymerase type III, exonuclease domain n=1
          Tax=uncultured organism HF70_19B12 RepID=Q2Q0H1_9ZZZZ
          Length = 270

 Score = 41.4 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL-ITGITPQ 71
           D ET G +P  DR  Q+A I  D + + + + E+    P       P A + + GI+ +
Sbjct: 12 FDTETTGLNPRKDRILQYAFIGRDVDGSSVCQVELI--DPGIKI---PEASMNVHGISNE 66

Query: 72 EARAKG 77
          +   +G
Sbjct: 67 DVTGRG 72


>UniRef50_UPI0001C31300 Exonuclease RNase T and DNA polymerase III n=1 Tax=Conexibacter
          woesei DSM 14684 RepID=UPI0001C31300
          Length = 259

 Score = 41.4 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 30/83 (36%), Gaps = 16/83 (19%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP------GAVLIT 66
           D ET G  P  DR    AA+    +     +          D+L  P      GA  + 
Sbjct: 7  FDIETTGIDPQSDRIVT-AAVSLAGDARPTVDH---------DWLVDPGVEIPAGATAVH 56

Query: 67 GITPQEARAKGENEAAFAARIHS 89
          GIT   ARA+G   A     I +
Sbjct: 57 GITTDHARAEGRASAEAVEEITA 79


>UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Deinococcus
          RepID=Q1IXC1_DEIGD
          Length = 180

 Score = 41.4 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 7/78 (8%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPAD---DYLPQPG-AVLITGI 68
           D ET G  P  D   +  A+R      V  E      +P +   + +P P  A  + GI
Sbjct: 6  FDLETTGLSPERDAIVEIGALRVVDGRVVESERFETLVRPQNAAGEVVPIPWRAQRVHGI 65

Query: 69 TP---QEARAKGENEAAF 83
          +    Q+A   G+    F
Sbjct: 66 SDAMVQDAPELGQVLPEF 83


>UniRef50_Q4FND4 Exodeoxyribonuclease I n=2 Tax=Candidatus Pelagibacter ubique
          RepID=Q4FND4_PELUB
          Length = 475

 Score = 41.4 bits (96), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
               D E+   + +     +   I  D  F  +     F C+  +  +PQ  A+++   
Sbjct: 2  NLAIWDIESSSANTSWGSIIEVGGILVDPNFKELDR-FNFRCRLPEGEVPQAMALIVNKT 60

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +         +     +++ +
Sbjct: 61 SVDLLTKGNLSHYQMLSQLEA 81


>UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_ARATH
          Length = 222

 Score = 41.1 bits (95), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          + D D +   ++ D E  G +  +DR  + A I T+ +     E      +   D L
Sbjct: 37 LEDGDYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCL 93


>UniRef50_B3T077 Putative exonuclease n=1 Tax=uncultured marine microorganism
           HF4000_001N02 RepID=B3T077_9ZZZZ
          Length = 299

 Score = 41.1 bits (95), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 13  HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
            D ET G     DR  Q+A I +D +    G                  A  I GI+ ++
Sbjct: 42  FDLETTGLDARKDRIVQYALIGSDVD----GSHINLASLVDPRRGIPTAASRIHGISEED 97

Query: 73  ARAKGENE 80
            R  G  E
Sbjct: 98  VRGVGSFE 105


>UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlamydiales
          RepID=C4PPS2_CHLTJ
          Length = 250

 Score = 41.1 bits (95), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+  D ET G     DR  +FAAIR    F+ I +   F   P         +  I  I+
Sbjct: 9  FVCLDCETTGLDVKKDRVIEFAAIR--FTFDEIIDSVEFLIHPERAV--SAESQKIHKIS 64

Query: 70 PQEARAK 76
              R K
Sbjct: 65 DAMLRDK 71


>UniRef50_P47277 DNA polymerase III polC-type n=2 Tax=Mycoplasma RepID=DPO3_MYCGE
          Length = 1451

 Score = 40.7 bits (94), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL-ITG 67
           TF+  D ET G H   D   +F+A +  +   +  + + F+ K      P P  +  IT 
Sbjct: 415 TFVIFDIETTGLHGRYDDVIEFSARKIKNNSEI--DHQQFFLKIDK---PIPKTITEITK 469

Query: 68  ITPQEARAKGENEAAFAARIHS 89
           IT +     G ++     +I +
Sbjct: 470 ITDEMLEG-GIDQQQGLEKIRN 490


>UniRef50_C1FD33 Exonuclease and DNA helicase n=3 Tax=cellular organisms
           RepID=C1FD33_9CHLO
          Length = 1473

 Score = 40.7 bits (94), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           P  +  D ET G +   +R  + AA+      +   +P      P    +P P  V +TG
Sbjct: 293 PCVVVFDLETTGLNKDRNRIIEIAAVNVS---DPTHQPMSTLVNPGRFAVPPP-VVALTG 348

Query: 68  ITPQEARAKGENEAAFAARI 87
           IT     A        AA +
Sbjct: 349 ITNAMVSAPAVPSFQRAAEL 368


>UniRef50_A5I1F6 Helicase, UvrD/REP/exonuclease family protein n=10 Tax=Clostridium
           RepID=A5I1F6_CLOBH
          Length = 855

 Score = 40.3 bits (93), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           +T        +  D E+ G +   D   Q A I+ +++  VI   + F       ++   
Sbjct: 486 LTRGLDNENVVVFDVESTGINTTEDEIVQIAGIKINNKGEVIESFQRFLT--PKKFVGD- 542

Query: 61  GAVLITGITPQEARAKGEN 79
            + L+ G + Q  +  GEN
Sbjct: 543 -SYLVHGFSDQFLKENGEN 560


>UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 23134
          RepID=A1ZKT0_9SPHI
          Length = 245

 Score = 39.9 bits (92), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
          +   +F D ET GT    DR  Q A I+  ++   + +  +            P    + 
Sbjct: 4  KKPIVFFDLETTGTDTLNDRIVQIAIIKLAADGTKVEKERLI----NPTIPIPPEVTKVH 59

Query: 67 GITPQE 72
          G++ + 
Sbjct: 60 GVSDEM 65


>UniRef50_Q2SSE0 DNA polymerase III, alpha subunit, Gram-positive type n=4
           Tax=Mollicutes RepID=Q2SSE0_MYCCT
          Length = 1479

 Score = 39.9 bits (92), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 15/88 (17%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
               K    +F D ET G  P LD   +F AI  + +            +   D L +P 
Sbjct: 424 NQNLKDAKMVFFDLETTGLSPELDEIIEFGAIEYNFKTGE---------RKKIDILIKPK 474

Query: 62  AVL------ITGITPQEARAKGENEAAF 83
           + L      +T I  +    K   E AF
Sbjct: 475 SKLKDFTKKLTNINEEMLENKPGIEVAF 502


>UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces japonicus yFS275
          RepID=B6JVJ0_SCHJY
          Length = 187

 Score = 39.9 bits (92), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          MT   + P  ++ D E  G     D   + AAI TD + N I E         DD L
Sbjct: 1  MTAALRSP-LVWVDCEMTGLEVGKDVLMEVAAIITDGDLNPIEEKFEETIHVDDDKL 56


>UniRef50_Q7NC15 PolC n=1 Tax=Mycoplasma gallisepticum RepID=Q7NC15_MYCGA
          Length = 1501

 Score = 39.9 bits (92), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVF 48
           Q +F+  D ET G +   ++  + AA+R  +E NV      F
Sbjct: 414 QLSFVIFDIETTGLNAYYEQIIEIAAVRVKAELNVTNHQLEF 455


>UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=ORN_AZOSE
          Length = 183

 Score = 39.9 bits (92), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
          Q   ++ D E  G  P  DR  + A + TDS+ N + E  V      D  L
Sbjct: 5  QNHLIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVL 55


>UniRef50_B8GAH5 DNA polymerase III, epsilon subunit n=1 Tax=Chloroflexus aggregans
           DSM 9485 RepID=B8GAH5_CHLAD
          Length = 233

 Score = 39.9 bits (92), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%)

Query: 14  DYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEA 73
           D ET G  P  D      A+  ++   ++ +      +P     P   ++ +  +TP+E 
Sbjct: 42  DVETTGLDPRHDALIAIGAVNVENGRVLLKQTWHSLIRPPPGREPSVESIRVHHLTPEEL 101

Query: 74  R 74
           R
Sbjct: 102 R 102


>UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamydiales
          RepID=Q252U5_CHLFF
          Length = 249

 Score = 39.9 bits (92), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+  D E  G     DR  +FAA R   + NVI   E        D +    +  I  I+
Sbjct: 9  FVCLDCEMTGLDVKKDRIIEFAAKRFTFD-NVIDSMETL---INPDRVISAESQRIHRIS 64

Query: 70 PQEARAK 76
              + +
Sbjct: 65 DAMLKDQ 71


>UniRef50_Q6MGT7 DNA polymerase III alpha subunit n=1 Tax=Bdellovibrio
          bacteriovorus RepID=Q6MGT7_BDEBA
          Length = 217

 Score = 39.5 bits (91), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP-QPGAVLITGI 68
          F+  D ET GT P +D+  +  A+R      + G+PE  +    D   P  PGA  + GI
Sbjct: 15 FIAFDLETTGTVPGVDQIVEIGAVRF-----IDGQPEAIFATLIDPLRPIPPGASAVNGI 69

Query: 69 TPQEARAK 76
          +    + K
Sbjct: 70 SDDMVKGK 77


>UniRef50_C1DKH9 DNA polymerase III, epsilon subunit n=17 Tax=Pseudomonadaceae
           RepID=C1DKH9_AZOVD
          Length = 240

 Score = 38.4 bits (88), Expect = 0.080,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
               F+  D ET G +   D      A+  +++   I     F C           +VLI
Sbjct: 40  HAQRFVVLDLETTGLNVERDVVLSIGAVLIEND--AIDLSRQFECTLRRRLKSVTESVLI 97

Query: 66  TGITPQEARAKGENEAAFAARI 87
            GI P  A A G   A    R 
Sbjct: 98  HGIAP-SALAVGTAPAEALLRF 118


>UniRef50_B0UN90 Exonuclease RNase T and DNA polymerase III n=3 Tax=Rhizobiales
          RepID=B0UN90_METS4
          Length = 223

 Score = 38.0 bits (87), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 14 DYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          D ET G  P  D     AAIR   +   I   E        D    P A+ +  +
Sbjct: 35 DCETTGLDPRRDEIVAVAAIRIRGD--RILTSESLRATVRSDRPSSPEAIKVHRL 87


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteo...   137   9e-32
UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacte...   134   8e-31
UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID...   133   2e-30
UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=...   131   6e-30
UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammapr...   130   2e-29
UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellul...   129   3e-29
UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinel...   126   1e-28
UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepI...   125   5e-28
UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales...   124   6e-28
UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitroso...   124   6e-28
UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter...   124   1e-27
UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus cap...   124   1e-27
UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacte...   123   2e-27
UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacter...   121   9e-27
UniRef50_P57620 Exodeoxyribonuclease I n=2 Tax=Buchnera aphidico...   119   3e-26
UniRef50_Q8K923 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   118   6e-26
UniRef50_A3WL65 Exonuclease I n=2 Tax=Idiomarina RepID=A3WL65_9GAMM   118   8e-26
UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas ...   118   8e-26
UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacter...   116   2e-25
UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate divisio...   116   2e-25
UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xa...   116   2e-25
UniRef50_Q89A43 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   116   3e-25
UniRef50_C6XFI1 Exonuclease I n=1 Tax=Candidatus Liberibacter as...   115   4e-25
UniRef50_Q7VQX2 Exodeoxyribonuclease I n=2 Tax=Candidatus Blochm...   113   2e-24
UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacte...   113   2e-24
UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae...   112   4e-24
UniRef50_Q056Y2 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidico...   111   7e-24
UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=...   111   8e-24
UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus ...   110   1e-23
UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium...   108   5e-23
UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW   101   7e-21
UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacter...   100   1e-20
UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2...    99   4e-20
UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae ...    94   1e-18
UniRef50_A1ZTJ0 Exodeoxyribonuclease I, putative n=1 Tax=Microsc...    92   6e-18
UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3X...    91   8e-18
UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL...    91   9e-18
UniRef50_B9NSM4 Exodeoxyribonuclease I n=1 Tax=Rhodobacteraceae ...    88   1e-16
UniRef50_Q07NS2 Exodeoxyribonuclease I subunit C n=5 Tax=Alphapr...    85   9e-16
UniRef50_C1TRP3 Exonuclease, DNA polymerase III, epsilon subunit...    81   1e-14
UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei Re...    80   2e-14
UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenel...    80   3e-14
UniRef50_A2R5F8 Remark: it is assumed (Fragment) n=1 Tax=Aspergi...    79   3e-14
UniRef50_C7H6D8 DNA polymerase III, alpha subunit n=4 Tax=Clostr...    78   7e-14
UniRef50_A5IXK4 DNA polymerase III alpha subunit n=1 Tax=Mycopla...    78   1e-13
UniRef50_D0RRC0 Exodeoxyribonuclease I n=1 Tax=alpha proteobacte...    77   2e-13
UniRef50_C7G6P2 DNA polymerase III PolC-type n=1 Tax=Roseburia i...    73   3e-12
UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pedic...    72   5e-12
UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC21...    72   7e-12
UniRef50_B3PN84 DNA polymerase III subunit alpha n=2 Tax=Mycopla...    71   1e-11
UniRef50_A5UUT9 DNA polymerase III, epsilon subunit n=4 Tax=Chlo...    70   2e-11
UniRef50_Q47TJ3 DNA polymerase III, epsilon subunit n=10 Tax=Act...    70   3e-11
UniRef50_D1N2X3 DNA polymerase III, epsilon subunit n=1 Tax=Vict...    68   6e-11
UniRef50_B5ZV55 DNA polymerase III, epsilon subunit n=23 Tax=Alp...    68   1e-10
UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group...    68   1e-10
UniRef50_Q6KIN3 DNA polymerase III alpha subunit n=1 Tax=Mycopla...    67   1e-10
UniRef50_UPI0001693F5B Exonuclease RNase T and DNA polymerase II...    67   2e-10
UniRef50_A2SRZ3 Exonuclease, RNase T and DNA polymerase III n=1 ...    66   3e-10
UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae...    66   4e-10
UniRef50_A4GJC0 Exodeoxyribonuclease I n=1 Tax=uncultured marine...    66   4e-10
UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms Re...    66   5e-10
UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD3...    65   8e-10
UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Eutele...    65   9e-10
UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7...    58   9e-08
UniRef50_C2BLZ4 DNA polymerase III subunit epsilon n=6 Tax=Coryn...    58   1e-07

Sequences not found previously or not previously below threshold:

UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha ...    68   9e-11
UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=...    67   2e-10
UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun seq...    65   9e-10
UniRef50_Q2RJC1 DNA polymerase III, epsilon subunit n=1 Tax=Moor...    64   2e-09
UniRef50_B8GAH5 DNA polymerase III, epsilon subunit n=1 Tax=Chlo...    63   3e-09
UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_...    63   3e-09
UniRef50_A6DVI9 Putative exonuclease n=2 Tax=Roseovarius RepID=A...    63   4e-09
UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms Rep...    63   4e-09
UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria R...    62   5e-09
UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria R...    62   6e-09
UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta R...    62   6e-09
UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_B...    61   1e-08
UniRef50_C7IIY1 DNA polymerase III, epsilon subunit n=1 Tax=Clos...    61   1e-08
UniRef50_Q2W728 DNA polymerase III n=4 Tax=Magnetospirillum RepI...    60   3e-08
UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Para...    60   3e-08
UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms Re...    60   3e-08
UniRef50_D1N0X4 DNA polymerase III, epsilon subunit n=1 Tax=Vict...    59   4e-08
UniRef50_Q5SK39 DNA polymerase III epsilon chain-like protein n=...    59   4e-08
UniRef50_C1FD33 Exonuclease and DNA helicase n=3 Tax=cellular or...    59   4e-08
UniRef50_Q0A6Z2 Putative PAS/PAC sensor protein n=1 Tax=Alkalili...    59   4e-08
UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Dein...    59   4e-08
UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 ...    59   5e-08
UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=...    58   6e-08
UniRef50_O68045 DNA polymerase III subunit epsilon-like protein ...    58   7e-08
UniRef50_Q8EUK5 DNA polymerase III subunit alpha n=1 Tax=Mycopla...    58   8e-08
UniRef50_D0B846 Exonuclease n=51 Tax=Alphaproteobacteria RepID=D...    58   1e-07
UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogac...    58   1e-07
UniRef50_D1PV56 DNA-directed DNA polymerase III epsilon subunit ...    58   1e-07
UniRef50_Q16B76 Exonuclease, putative n=3 Tax=Roseobacter RepID=...    58   1e-07
UniRef50_B9XHY8 DNA-directed DNA polymerase n=1 Tax=bacterium El...    58   1e-07
UniRef50_A7HHL1 Exonuclease RNase T and DNA polymerase III n=1 T...    57   1e-07
UniRef50_D2RJV7 DNA polymerase III, epsilon subunit n=1 Tax=Acid...    57   2e-07
UniRef50_C4LI21 Putative uncharacterized protein n=1 Tax=Coryneb...    57   2e-07
UniRef50_UPI0001C31300 Exonuclease RNase T and DNA polymerase II...    57   2e-07
UniRef50_C1AA06 Exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27...    57   2e-07
UniRef50_A9KR66 DNA polymerase III, epsilon subunit n=1 Tax=Clos...    57   2e-07
UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila Re...    57   2e-07
UniRef50_D0B3W0 DNA polymerase III n=51 Tax=Rhizobiales RepID=D0...    57   2e-07
UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma...    56   2e-07
UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 T...    56   3e-07
UniRef50_B4W5N5 DNA polymerase III, epsilon subunit n=2 Tax=Caul...    56   3e-07
UniRef50_A3XHM4 DNA polymerase III, epsilon subunit n=1 Tax=Leeu...    56   3e-07
UniRef50_A7HNS3 DNA polymerase III, alpha subunit n=2 Tax=Thermo...    56   3e-07
UniRef50_C6XFY8 DNA polymerase III subunit epsilon n=1 Tax=Candi...    56   3e-07
UniRef50_Q2Q0H1 Putative DNA polymerase type III, exonuclease do...    56   3e-07
UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacteri...    56   3e-07
UniRef50_B9JNT5 Polymerase epsilon subunit protein n=1 Tax=Agrob...    56   3e-07
UniRef50_A8LQ52 DNA polymerase III subunit epsilon n=2 Tax=Rhodo...    56   3e-07
UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes...    56   4e-07
UniRef50_Q4FND4 Exodeoxyribonuclease I n=2 Tax=Candidatus Pelagi...    56   4e-07
UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 2313...    56   4e-07
UniRef50_Q600A7 DNA polymerase III, alpha chain n=4 Tax=Mycoplas...    56   4e-07
UniRef50_D0XIW2 DNA polymerase III, epsilon subunit n=1 Tax=Brev...    56   4e-07
UniRef50_A1BCD0 DNA polymerase III, epsilon subunit n=1 Tax=Para...    56   4e-07
UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_X...    56   5e-07
UniRef50_UPI0001C41BCD exonuclease n=1 Tax=Methanobrevibacter ru...    55   5e-07
UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nucl...    55   6e-07
UniRef50_A0JYL8 DNA polymerase III, epsilon subunit n=8 Tax=Micr...    55   6e-07
UniRef50_A5EY86 DNA polymerase III, epsilon subunit n=1 Tax=Dich...    55   7e-07
UniRef50_Q0BM06 DNA-directed DNA polymerase n=20 Tax=Francisella...    55   7e-07
UniRef50_C9LHX7 Exonuclease n=1 Tax=Prevotella tannerae ATCC 512...    55   7e-07
UniRef50_A1VGE3 Exonuclease, RNase T and DNA polymerase III n=4 ...    55   7e-07
UniRef50_C1DWW1 DNA polymerase III PolC-type (PolIII) n=4 Tax=Hy...    55   8e-07
UniRef50_C9S0C0 DNA polymerase III, alpha subunit n=30 Tax=Bacte...    55   8e-07
UniRef50_A9NGM6 DNA polymerase III, epsilon subunit n=1 Tax=Acho...    55   8e-07
UniRef50_C0A8I6 DNA-directed DNA polymerase n=1 Tax=Opitutaceae ...    55   8e-07
UniRef50_UPI0001C36AB7 DNA polymerase III, alpha subunit n=1 Tax...    55   8e-07
UniRef50_C7RGM9 DNA polymerase III, alpha subunit n=5 Tax=Anaero...    55   9e-07
UniRef50_B6ISI0 Exonuclease, putative n=1 Tax=Rhodospirillum cen...    55   9e-07
UniRef50_C4XFQ7 Putative uncharacterized protein n=1 Tax=Mycopla...    55   1e-06
UniRef50_C9YB77 Putative uncharacterized protein n=1 Tax=Curviba...    55   1e-06
UniRef50_C1XKD8 DNA polymerase III, alpha subunit (Gram-positive...    55   1e-06
UniRef50_D1VSB7 DNA polymerase III, alpha subunit, Gram-positive...    55   1e-06
UniRef50_B3T077 Putative exonuclease n=1 Tax=uncultured marine m...    54   1e-06
UniRef50_Q1NJL0 DNA polymerase III, epsilon subunit n=1 Tax=delt...    54   1e-06
UniRef50_B0P1Y1 Putative uncharacterized protein n=2 Tax=Clostri...    54   1e-06
UniRef50_C3RQT5 DNA polymerase III subunit epsilon n=1 Tax=Molli...    54   1e-06
UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlam...    54   1e-06
UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8    54   1e-06
UniRef50_Q81AF9 DNA polymerase III alpha subunit n=76 Tax=Bacill...    54   1e-06
UniRef50_A1K872 DNA polymerase III epsilon chain-like protein n=...    54   1e-06
UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 ...    54   1e-06
UniRef50_Q2NJG3 DNA polymerase III alpha subunit n=3 Tax=Candida...    54   1e-06
UniRef50_B2Q2X9 Putative uncharacterized protein n=1 Tax=Provide...    54   2e-06
UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=...    54   2e-06
UniRef50_C5B532 DNA polymerase III epsilon subunit n=1 Tax=Methy...    54   2e-06
UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms Re...    54   2e-06
UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=...    54   2e-06
UniRef50_A4U4S6 DNA polymerase III epsilon chain-like protein n=...    54   2e-06
UniRef50_A3X8N6 Exonuclease, DNA polymerase III, epsilon subunit...    54   2e-06
UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces ja...    54   2e-06
UniRef50_B7CAB9 Putative uncharacterized protein n=1 Tax=Eubacte...    54   2e-06
UniRef50_Q2KXB5 Putative exonuclease n=4 Tax=Bordetella RepID=Q2...    54   2e-06
UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamyd...    54   2e-06
UniRef50_P47277 DNA polymerase III polC-type n=2 Tax=Mycoplasma ...    53   2e-06
UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus...    53   2e-06
UniRef50_Q1QW65 DNA polymerase III, epsilon subunit n=13 Tax=Gam...    53   2e-06
UniRef50_C4KA24 DNA polymerase III, epsilon subunit n=1 Tax=Thau...    53   2e-06
UniRef50_D0JBJ5 DNA polymerase III subunit epsilon n=1 Tax=Blatt...    53   2e-06
UniRef50_Q2Z0D2 Rad3-related DNA helicases n=1 Tax=uncultured ca...    53   2e-06
UniRef50_C7RJN1 DNA polymerase III, epsilon subunit n=1 Tax=Cand...    53   3e-06
UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturatio...    53   3e-06
UniRef50_A4HVE4 Mitochondrial DNA polymerase I protein B, putati...    53   3e-06
UniRef50_C5V7D5 Exonuclease RNase T and DNA polymerase III n=1 T...    53   3e-06
UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Ther...    53   3e-06
UniRef50_C7NEP7 DNA polymerase III, alpha subunit n=5 Tax=Fusoba...    53   3e-06
UniRef50_C2BET5 3'-5' exonuclease and CRISPR-associated Cas2 fam...    53   3e-06
UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycot...    53   3e-06
UniRef50_D2RB05 CRISPR-associated endoribonuclease Cas2 n=2 Tax=...    53   3e-06
UniRef50_A5I1F6 Helicase, UvrD/REP/exonuclease family protein n=...    53   3e-06
UniRef50_A1VJH5 Exonuclease, RNase T and DNA polymerase III n=8 ...    53   3e-06
UniRef50_C6LDW1 Helicase, RecD/TraA family n=4 Tax=Clostridia Re...    53   3e-06
UniRef50_Q0AE35 DNA polymerase III, epsilon subunit n=5 Tax=Beta...    53   3e-06
UniRef50_C7H779 DNA polymerase III, alpha subunit n=5 Tax=Clostr...    53   3e-06
UniRef50_A4ASW0 DNA polymerase III, epsilon subunit n=1 Tax=Flav...    53   3e-06
UniRef50_Q1EM31 DNA polymerase III, alpha subunit n=1 Tax=uncult...    53   3e-06
UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natr...    53   3e-06
UniRef50_C0W0V1 DNA polymerase III subunit epsilon n=1 Tax=Actin...    53   4e-06
UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribon...    53   4e-06
UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (B...    53   4e-06
UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1 ...    53   4e-06
UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER       53   4e-06
UniRef50_C6CYA2 DNA polymerase III, epsilon subunit n=2 Tax=Baci...    53   4e-06
UniRef50_B0B7H7 DNA polymerase III, epsilon chain n=13 Tax=Chlam...    53   4e-06
UniRef50_B4S7Q3 Exonuclease RNase T and DNA polymerase III n=1 T...    52   5e-06
UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorp...    52   5e-06
UniRef50_Q1GL30 DNA polymerase III epsilon subunit n=2 Tax=Ruege...    52   5e-06
UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID...    52   5e-06
UniRef50_C5CGL7 DNA polymerase III, alpha subunit n=2 Tax=Thermo...    52   5e-06
UniRef50_D0WFC5 DNA polymerase III, alpha chain n=1 Tax=Slackia ...    52   5e-06
UniRef50_C1YH96 DNA polymerase III epsilon subunit-like 3'-5' ex...    52   5e-06
UniRef50_C0GM30 DNA polymerase III, epsilon subunit n=1 Tax=Desu...    52   5e-06
UniRef50_A5KMD9 Putative uncharacterized protein n=5 Tax=Clostri...    52   5e-06
UniRef50_A8UVH7 Putative uncharacterized protein n=1 Tax=Hydroge...    52   5e-06
UniRef50_D1R5I0 Putative uncharacterized protein n=1 Tax=Parachl...    52   5e-06
UniRef50_A3UR50 DNA polymerase III, epsilon chain n=6 Tax=Vibrio...    52   6e-06
UniRef50_UPI00005A0A92 PREDICTED: similar to small fragment nucl...    52   6e-06
UniRef50_Q2SSE0 DNA polymerase III, alpha subunit, Gram-positive...    52   6e-06
UniRef50_A8RD59 Putative uncharacterized protein n=2 Tax=unclass...    52   6e-06
UniRef50_B3R0M5 DNA polymerase III alpha subunit n=1 Tax=Candida...    52   6e-06
UniRef50_Q6MGT7 DNA polymerase III alpha subunit n=1 Tax=Bdellov...    52   6e-06
UniRef50_Q11G58 DNA polymerase III, epsilon subunit n=1 Tax=Chel...    52   6e-06
UniRef50_A5Z7T3 Putative uncharacterized protein n=1 Tax=Eubacte...    52   6e-06
UniRef50_Q67P96 DNA polymerase III alpha subunit n=2 Tax=Firmicu...    52   6e-06
UniRef50_C6XW17 Exonuclease RNase T and DNA polymerase III n=74 ...    52   7e-06
UniRef50_D0WQJ6 Exonuclease, DNA polymerase III, epsilon subunit...    52   7e-06
UniRef50_Q0FXM2 Exonuclease, DNA polymerase III, epsilon subunit...    51   8e-06
UniRef50_B4S8Q4 DNA-directed DNA polymerase n=2 Tax=Chlorobiacea...    51   8e-06
UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavisp...    51   8e-06
UniRef50_C1CX37 Putative DNA-directed DNA polymerase (DNA polyme...    51   8e-06
UniRef50_C2BJB2 DNA polymerase III subunit epsilon n=1 Tax=Coryn...    51   8e-06
UniRef50_A8ES54 DNA polymerase III, epsilon subunit n=4 Tax=Epsi...    51   8e-06
UniRef50_B8GE83 Exonuclease RNase T and DNA polymerase III n=1 T...    51   8e-06
UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA    51   9e-06
UniRef50_A5F9M6 DNA polymerase III, epsilon subunit related exon...    51   9e-06
UniRef50_A3V111 Exonuclease, DNA polymerase III, epsilon subunit...    51   1e-05
UniRef50_C6V4W1 DNA polymerase III, epsilon subunit n=2 Tax=Neor...    51   1e-05
UniRef50_B4SAW0 Exonuclease RNase T and DNA polymerase III n=2 T...    51   1e-05
UniRef50_C0DA77 Putative uncharacterized protein n=4 Tax=Clostri...    51   1e-05
UniRef50_C8WWI2 DNA polymerase III, alpha subunit n=2 Tax=Alicyc...    51   1e-05
UniRef50_Q1QDN3 Exonuclease n=3 Tax=Psychrobacter RepID=Q1QDN3_P...    51   1e-05
UniRef50_B8CW68 DNA polymerase III, alpha subunit n=1 Tax=Haloth...    51   1e-05
UniRef50_Q68BL2 DNA helicase RecG n=2 Tax=cellular organisms Rep...    51   1e-05
UniRef50_C6W9X5 Exonuclease RNase T and DNA polymerase III n=1 T...    51   1e-05
UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae...    51   1e-05
UniRef50_B4AHF2 DNA polymerase III PolC-type (PolIII) n=1 Tax=Ba...    51   1e-05
UniRef50_Q6VY79 Putative uncharacterized protein n=1 Tax=Strepto...    51   1e-05
UniRef50_B7A7U0 Putative PAS/PAC sensor protein n=1 Tax=Thermus ...    51   1e-05
UniRef50_O83649 DNA polymerase III subunit epsilon n=2 Tax=Trepo...    51   1e-05
UniRef50_Q31GK8 Exonuclease n=8 Tax=Bacteria RepID=Q31GK8_THICR        51   1e-05
UniRef50_C4FGI7 Putative uncharacterized protein n=1 Tax=Bifidob...    51   1e-05
UniRef50_A2TRJ1 DNA polymerase III, epsilon subunit n=1 Tax=Dokd...    51   1e-05
UniRef50_D1BUD4 DNA polymerase III, epsilon subunit n=1 Tax=Xyla...    51   1e-05
UniRef50_C0QPN1 DNA polymerase III subunit epsilon n=1 Tax=Perse...    51   1e-05
UniRef50_B1Y7R5 DNA polymerase III, epsilon subunit n=6 Tax=Prot...    51   1e-05
UniRef50_C8WX41 Exonuclease RNase T and DNA polymerase III n=3 T...    51   1e-05
UniRef50_P54394 Probable ATP-dependent helicase dinG homolog n=1...    51   1e-05
UniRef50_Q1DB51 Exonuclease n=3 Tax=Cystobacterineae RepID=Q1DB5...    51   1e-05
UniRef50_Q315G7 DNA polymerase III, epsilon subunit n=1 Tax=Desu...    51   1e-05
UniRef50_B4VF18 DNA polymerase III subunit epsilon n=9 Tax=Strep...    51   1e-05
UniRef50_B9L7M7 Exonuclease n=3 Tax=cellular organisms RepID=B9L...    51   1e-05
UniRef50_C9RIR1 DNA polymerase III, epsilon subunit n=1 Tax=Fibr...    51   1e-05
UniRef50_Q83YZ1 DNA polymerase III alpha subunit n=1 Tax=Peanut ...    51   1e-05
UniRef50_Q5YSF0 Putative DNA polymerase n=1 Tax=Nocardia farcini...    51   1e-05
UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Beta...    51   1e-05

>UniRef50_Q1QT40 Exodeoxyribonuclease I subunit C n=10 Tax=Proteobacteria
          RepID=Q1QT40_CHRSD
          Length = 495

 Score =  137 bits (346), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 61/89 (68%), Positives = 68/89 (76%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M     +PTFL+HDYETFG  P  DRPAQFAAIRTDS+FN +GEP  FYCKPADD+LP P
Sbjct: 1  MAQGKTEPTFLWHDYETFGADPRRDRPAQFAAIRTDSDFNPVGEPMTFYCKPADDFLPHP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARIHS 89
           A LITGITPQ AR +G  E  FAARIH+
Sbjct: 61 QACLITGITPQAARRRGLAEIEFAARIHA 89


>UniRef50_Q483M2 Exodeoxyribonuclease I n=21 Tax=Gammaproteobacteria
          RepID=Q483M2_COLP3
          Length = 487

 Score =  134 bits (338), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 52/87 (59%), Positives = 69/87 (79%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          +  +QP+ L+HDYET+G +P  D+P+QFA IRTD + N+IGEPE+FYC P  DYLP P A
Sbjct: 8  NNTEQPSILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVDYLPHPEA 67

Query: 63 VLITGITPQEARAKGENEAAFAARIHS 89
           L+TGITPQ+A+ +G +EA FAARIH+
Sbjct: 68 CLVTGITPQKAQREGLSEAEFAARIHT 94


>UniRef50_B0BNV2 Exonuclease I n=17 Tax=Gammaproteobacteria RepID=B0BNV2_ACTPJ
          Length = 514

 Score =  133 bits (334), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/86 (65%), Positives = 67/86 (77%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
           +K  TF F+DYE+FG  PALDRPAQFA IRTDS+FN+IGEP +FYCK   DYLP P AV
Sbjct: 1  MNKNLTFFFYDYESFGVSPALDRPAQFAGIRTDSDFNIIGEPVMFYCKQTPDYLPSPEAV 60

Query: 64 LITGITPQEARAKGENEAAFAARIHS 89
          ++TGITPQ+  A+G  E  FAARIH+
Sbjct: 61 MVTGITPQQCNAEGVPEPEFAARIHA 86


>UniRef50_P04995 Exodeoxyribonuclease I n=282 Tax=Bacteria RepID=EX1_ECOLI
          Length = 475

 Score =  131 bits (331), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 84/89 (94%), Positives = 85/89 (95%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M D  +Q TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP
Sbjct: 2  MNDGKQQSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 61

Query: 61 GAVLITGITPQEARAKGENEAAFAARIHS 89
          GAVLITGITPQEARAKGENEAAFAARIHS
Sbjct: 62 GAVLITGITPQEARAKGENEAAFAARIHS 90


>UniRef50_Q21I25 Exodeoxyribonuclease I subunit C n=2 Tax=Gammaproteobacteria
          RepID=Q21I25_SACD2
          Length = 485

 Score =  130 bits (326), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/83 (57%), Positives = 60/83 (72%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           Q TF +HDYET+G +PA+DRP+QFA +RTD + N+IGEP V YCKP +D  P P A L+
Sbjct: 1  MQKTFYWHDYETWGANPAVDRPSQFAGVRTDMDLNIIGEPLVIYCKPPEDIWPNPEACLV 60

Query: 66 TGITPQEARAKGENEAAFAARIH 88
          TG+TPQE  AKG  E  F  +IH
Sbjct: 61 TGLTPQETLAKGVTEREFIKQIH 83


>UniRef50_Q21WQ6 Exodeoxyribonuclease I subunit C n=24 Tax=cellular organisms
          RepID=Q21WQ6_RHOFD
          Length = 485

 Score =  129 bits (324), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/87 (63%), Positives = 63/87 (72%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          MT +    TFL+HDYETFGT+   DRPAQFAAIRTD+E NVIG P + YC+PA D+LP P
Sbjct: 1  MTPSPSHHTFLWHDYETFGTNTRRDRPAQFAAIRTDAELNVIGAPLMLYCQPAGDFLPDP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARI 87
           A LITGITPQ    KG  E  FAA+I
Sbjct: 61 QACLITGITPQLCLEKGIPEYQFAAQI 87


>UniRef50_C1DSN1 Exodeoxyribonuclease I n=1 Tax=Azotobacter vinelandii DJ
          RepID=C1DSN1_AZOVD
          Length = 476

 Score =  126 bits (318), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/84 (48%), Positives = 51/84 (60%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             +  ++DYET G +P  DRP Q A IRTD   N IG P   YC+PADD LP P A L+
Sbjct: 1  MTSSIFWYDYETTGINPRCDRPLQVAGIRTDEALNEIGAPLNLYCRPADDILPHPAACLV 60

Query: 66 TGITPQEARAKGENEAAFAARIHS 89
          TGITP+    +G  EA F  R+H+
Sbjct: 61 TGITPRLLAERGLCEAEFVTRLHA 84


>UniRef50_Q4K7B4 Exodeoxyribonuclease I n=25 Tax=Pseudomonas RepID=Q4K7B4_PSEF5
          Length = 497

 Score =  125 bits (314), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 49/80 (61%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           +  ++DYET G +P  DRP Q A IRTD   N I EP   YC+P+DD LP P A +ITGI
Sbjct: 25  SLFWYDYETTGINPRCDRPLQVAGIRTDLALNEIDEPVNLYCQPSDDILPHPMACMITGI 84

Query: 69  TPQEARAKGENEAAFAARIH 88
           TP     +G  EA F  R+H
Sbjct: 85  TPGRLAEQGLGEADFMTRVH 104


>UniRef50_A6VXX3 Exodeoxyribonuclease I n=4 Tax=Oceanospirillales
          RepID=A6VXX3_MARMS
          Length = 484

 Score =  124 bits (313), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/86 (52%), Positives = 59/86 (68%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          +    +F + D+ET GT PA DRP QFA IRTD +FN IGEP +FYC+ A+D LPQP A 
Sbjct: 3  SSGPTSFFWFDFETTGTDPARDRPMQFAGIRTDLDFNPIGEPIMFYCRLAEDVLPQPEAC 62

Query: 64 LITGITPQEARAKGENEAAFAARIHS 89
          L+TGI+PQ+A  +G  EA F   + +
Sbjct: 63 LLTGISPQDANREGLCEAEFMQAVEA 88


>UniRef50_Q0AEW3 Exodeoxyribonuclease I subunit C n=2 Tax=Nitrosomonas
          RepID=Q0AEW3_NITEC
          Length = 486

 Score =  124 bits (313), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/82 (56%), Positives = 53/82 (64%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           T  +HDYET G +P  DRP QFA +RTD   N IG+P V YCKPA D LP P A L+TG
Sbjct: 6  STLYWHDYETSGANPRQDRPVQFAGLRTDEALNEIGDPLVIYCKPARDRLPHPEACLLTG 65

Query: 68 ITPQEARAKGENEAAFAARIHS 89
          ITPQ A  +G  E  F A IH+
Sbjct: 66 ITPQMAATRGLPEPEFIALIHA 87


>UniRef50_B3PLL7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria
          RepID=B3PLL7_CELJU
          Length = 497

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/85 (58%), Positives = 62/85 (72%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          + +Q T  +HDYET+G  PA+DRP QFA +RTD + N++GEP   Y +PA D LP+P A 
Sbjct: 3  STEQITLYWHDYETWGESPAIDRPVQFAGVRTDLDLNILGEPLTIYARPAPDVLPKPEAC 62

Query: 64 LITGITPQEARAKGENEAAFAARIH 88
          LITGITPQEA AKG +EA F A IH
Sbjct: 63 LITGITPQEAEAKGVSEADFIAAIH 87


>UniRef50_Q605A2 Exodeoxyribonuclease I n=1 Tax=Methylococcus capsulatus
          RepID=Q605A2_METCA
          Length = 478

 Score =  124 bits (311), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/81 (60%), Positives = 59/81 (72%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
          P+F ++D ETFGT PA DR AQFA +RTD EFN IG P+V YC+P+DD +P P A L+TG
Sbjct: 5  PSFYWYDLETFGTDPARDRIAQFAGLRTDLEFNPIGPPDVLYCRPSDDMVPYPDACLVTG 64

Query: 68 ITPQEARAKGENEAAFAARIH 88
          ITPQ A   G  E+AF A IH
Sbjct: 65 ITPQYAAELGVPESAFIATIH 85


>UniRef50_B8KPJ8 Exodeoxyribonuclease I n=1 Tax=gamma proteobacterium NOR5-3
          RepID=B8KPJ8_9GAMM
          Length = 482

 Score =  123 bits (308), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/84 (57%), Positives = 52/84 (61%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
               T  +HDYETFG  P  DRPAQFA +RTD + N IGEP V Y KP  DY+P P A 
Sbjct: 1  MSSSETLYWHDYETFGVDPGYDRPAQFAGLRTDLDLNPIGEPLVLYAKPPRDYVPHPDAC 60

Query: 64 LITGITPQEARAKGENEAAFAARI 87
          LITGITPQ A A G  EA F   I
Sbjct: 61 LITGITPQAALAAGVPEADFIKAI 84


>UniRef50_A4ADV7 Exodeoxyribonuclease I n=2 Tax=Gammaproteobacteria
          RepID=A4ADV7_9GAMM
          Length = 482

 Score =  121 bits (303), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/84 (57%), Positives = 57/84 (67%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
               TF +HDYETFG  PA DRP+QFA +RTD + N+IGEP V Y +P  DY+P P A 
Sbjct: 1  MSSSETFYWHDYETFGVDPAYDRPSQFAGLRTDLDLNLIGEPLVIYAQPPRDYVPHPDAC 60

Query: 64 LITGITPQEARAKGENEAAFAARI 87
          LITGITPQ A A+G  EA F + I
Sbjct: 61 LITGITPQTALAEGVVEAQFMSTI 84


>UniRef50_P57620 Exodeoxyribonuclease I n=2 Tax=Buchnera aphidicola (Acyrthosiphon
          pisum) RepID=EX1_BUCAI
          Length = 413

 Score =  119 bits (299), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/84 (60%), Positives = 61/84 (72%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
           K P FLF+DYETFG H ALD+PAQFA IRTD   N+I +P+ FYC P+DDYLP PG+VL
Sbjct: 6  KKTPNFLFYDYETFGIHTALDKPAQFACIRTDINLNIIDDPQYFYCFPSDDYLPDPGSVL 65

Query: 65 ITGITPQEARAKGENEAAFAARIH 88
          IT ITPQ     G NE  F+ +I+
Sbjct: 66 ITHITPQYTEKNGTNEYNFSQKIY 89


>UniRef50_Q8K923 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola (Schizaphis
          graminum) RepID=EX1_BUCAP
          Length = 482

 Score =  118 bits (296), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/85 (55%), Positives = 62/85 (72%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
             +  FLF+DYETFG H +LD+PAQF++IRTD  FN++ EP+ FYC P+DDYLP P ++
Sbjct: 6  KKNEVNFLFYDYETFGIHTSLDKPAQFSSIRTDKNFNIMEEPKCFYCFPSDDYLPDPSSI 65

Query: 64 LITGITPQEARAKGENEAAFAARIH 88
          LITGITP+     G NE  F+ +IH
Sbjct: 66 LITGITPEYTEKHGFNEYKFSKKIH 90


>UniRef50_A3WL65 Exonuclease I n=2 Tax=Idiomarina RepID=A3WL65_9GAMM
          Length = 486

 Score =  118 bits (295), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/85 (55%), Positives = 57/85 (67%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          +   QPTF +HDYET+G  P +DRPAQFA +RT  +F  +G P   Y +P  D+LP P A
Sbjct: 7  NNKNQPTFYWHDYETWGARPLIDRPAQFAGMRTTLDFQPVGRPLTIYAQPTPDFLPDPEA 66

Query: 63 VLITGITPQEARAKGENEAAFAARI 87
          VLITGITPQ A  +G NEA FA  I
Sbjct: 67 VLITGITPQYALNQGVNEANFAQAI 91


>UniRef50_B4SPA5 Exodeoxyribonuclease I n=3 Tax=Stenotrophomonas
          RepID=B4SPA5_STRM5
          Length = 479

 Score =  118 bits (295), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/83 (51%), Positives = 56/83 (67%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             +FLF+D ETFG  P   R +Q+AAIRTD++ N I  P  F+ +PADD LP P A L+
Sbjct: 1  MADSFLFYDLETFGQDPRRTRISQYAAIRTDADLNEIDTPVSFFVRPADDLLPSPMATLV 60

Query: 66 TGITPQEARAKGENEAAFAARIH 88
          TGITPQ+A A+G +EA    RI+
Sbjct: 61 TGITPQQALAEGISEAEAFDRIN 83


>UniRef50_A5CVQ8 Exodeoxyribonuclease I n=4 Tax=Gammaproteobacteria
          RepID=A5CVQ8_VESOH
          Length = 473

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           TF ++DYETFG  P +DR +QFA IRTD  FN++ E ++FYCKP +D L  P   LITG
Sbjct: 2  KTFYWYDYETFGISPKIDRISQFAGIRTDENFNILDE-QMFYCKPTNDCLLSPETCLITG 60

Query: 68 ITPQEARAKGENEAAFAARIHS 89
          I+PQ    KG  E  F  +IH+
Sbjct: 61 ISPQLCEQKGMIEHKFIKKIHA 82


>UniRef50_A5KSP8 Exodeoxyribonuclease I n=2 Tax=candidate division TM7
          RepID=A5KSP8_9BACT
          Length = 476

 Score =  116 bits (292), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/86 (44%), Positives = 47/86 (54%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
           D   TF F+D ET G  P  DR  QFA  RT  + + IGEP     +  DD LP P AV
Sbjct: 3  KDMAETFFFYDLETSGLDPRRDRIMQFAGQRTTMDLDPIGEPFNILVRLNDDVLPSPDAV 62

Query: 64 LITGITPQEARAKGENEAAFAARIHS 89
          ++TGITPQ+   +G  EA F    H+
Sbjct: 63 MVTGITPQKTHEEGIAEAEFIKLFHN 88


>UniRef50_D2UDX2 Putative exodeoxyribonucleaseIprotein n=1 Tax=Xanthomonas
          albilineans RepID=D2UDX2_XANAL
          Length = 492

 Score =  116 bits (291), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/85 (56%), Positives = 56/85 (65%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          D     +FLF+D ETFG  P   R AQFAA+RTD+  N I EP  F+ +PADD LP P A
Sbjct: 11 DATMPDSFLFYDLETFGADPRRTRIAQFAAVRTDAALNQIEEPISFFVQPADDLLPSPVA 70

Query: 63 VLITGITPQEARAKGENEAAFAARI 87
           LITGITPQ+A  +G NEA   ARI
Sbjct: 71 TLITGITPQQALREGINEADAFARI 95


>UniRef50_Q89A43 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola (Baizongia
          pistaciae) RepID=EX1_BUCBP
          Length = 481

 Score =  116 bits (290), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/87 (51%), Positives = 62/87 (71%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
            +   TFLF+DYETFG +PALD+P+QF+ I+TD +FN+IG  +  +C P+ DYLP P +
Sbjct: 4  QKNTSLTFLFYDYETFGKNPALDKPSQFSCIQTDIDFNIIGSIQEIFCYPSVDYLPDPES 63

Query: 63 VLITGITPQEARAKGENEAAFAARIHS 89
          VLITGI+P+     G NE  FA +I+S
Sbjct: 64 VLITGISPKYTSLFGVNEFEFAKKIYS 90


>UniRef50_C6XFI1 Exonuclease I n=1 Tax=Candidatus Liberibacter asiaticus str.
          psy62 RepID=C6XFI1_LIBAP
          Length = 471

 Score =  115 bits (289), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/83 (59%), Positives = 57/83 (68%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              F+ +DYETFG   ALDRPAQFA +R D ++  I   EVF+CKPADDYLP P AV I
Sbjct: 1  MTNHFVIYDYETFGRDVALDRPAQFAGVRVDRQWEKIESTEVFFCKPADDYLPDPEAVFI 60

Query: 66 TGITPQEARAKGENEAAFAARIH 88
          TGITPQ+A   G  EA F+ RIH
Sbjct: 61 TGITPQKALRDGVVEAEFSRRIH 83


>UniRef50_Q7VQX2 Exodeoxyribonuclease I n=2 Tax=Candidatus Blochmannia
          RepID=Q7VQX2_BLOFL
          Length = 501

 Score =  113 bits (284), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/87 (52%), Positives = 61/87 (70%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M    K+PTFL +DYETFG +PALDRPAQFA+IR ++    + + EVF+C+  +DYLP P
Sbjct: 1  MLSNIKKPTFLIYDYETFGLNPALDRPAQFASIRVNNSLCPVEKKEVFFCQIPNDYLPNP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARI 87
           +VLITGITP +  + G  E  FA +I
Sbjct: 61 ESVLITGITPYDTLSNGLLEPQFAYQI 87


>UniRef50_UPI0000E0E98F exodeoxyribonuclease I n=1 Tax=Rhodobacterales bacterium HTCC2255
          RepID=UPI0000E0E98F
          Length = 488

 Score =  113 bits (283), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/82 (53%), Positives = 49/82 (59%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
            +FLFHDYET+G  P  D P QFAAIRTD       EP     K   DYLP P AVL+T
Sbjct: 5  PASFLFHDYETWGISPQHDYPCQFAAIRTDENLQQCDEPINITAKIHLDYLPHPQAVLVT 64

Query: 67 GITPQEARAKGENEAAFAARIH 88
          GITPQ   A+GE E  F  +IH
Sbjct: 65 GITPQMTLAEGEYEYTFMQKIH 86


>UniRef50_Q2P315 Exodeoxyribonuclease I n=17 Tax=Xanthomonadaceae
          RepID=Q2P315_XANOM
          Length = 481

 Score =  112 bits (280), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/82 (52%), Positives = 53/82 (64%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             +FLF+D ETFG  P   R AQFAA+RTD++  VI EP  F+ +PADD LP P A ++
Sbjct: 1  MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV 60

Query: 66 TGITPQEARAKGENEAAFAARI 87
          T ITPQ A  +G  EA   ARI
Sbjct: 61 TAITPQHALREGVTEAEAFARI 82


>UniRef50_Q056Y2 Exodeoxyribonuclease I n=1 Tax=Buchnera aphidicola str. Cc
          (Cinara cedri) RepID=Q056Y2_BUCCC
          Length = 475

 Score =  111 bits (278), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/88 (42%), Positives = 54/88 (61%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M +   +   +F+DYETFG + ALD+ +QF +I TD++F+ I +  + +C P  DYLP P
Sbjct: 1  MCEYFSKKKIIFYDYETFGKNVALDKVSQFCSIETDNKFSYIIKKTILFCYPPIDYLPDP 60

Query: 61 GAVLITGITPQEARAKGENEAAFAARIH 88
           A+LIT I PQ     G NE   + +IH
Sbjct: 61 EAILITKILPQYTYKYGLNEYFLSKKIH 88


>UniRef50_A4BJV3 Putative exodeoxyribonuclease i protein n=1 Tax=Reinekea
          blandensis MED297 RepID=A4BJV3_9GAMM
          Length = 517

 Score =  111 bits (278), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/88 (44%), Positives = 57/88 (64%)

Query: 2  TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           +    P++L++DYET+GT P+ DR AQFAA+RTD + N+I EP   +CKP  D +  PG
Sbjct: 3  NNATHPPSYLWYDYETWGTVPSRDRIAQFAAVRTDMDLNIIEEPINLFCKPDIDTVIDPG 62

Query: 62 AVLITGITPQEARAKGENEAAFAARIHS 89
          AV IT ++P E    G +E  F+  +H+
Sbjct: 63 AVQITRLSPLELEQTGLSEWEFSQAVHN 90


>UniRef50_D0KZN4 Exodeoxyribonuclease I n=1 Tax=Halothiobacillus neapolitanus c2
          RepID=D0KZN4_HALNC
          Length = 495

 Score =  110 bits (276), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +FLF+D+ET G+ P  DRP QFAA+RT+ E   I  P   Y   + + LP P AVL+TGI
Sbjct: 2  SFLFYDFETTGSDPRCDRPIQFAALRTNDELEPIDSPLTLYATLSPEVLPHPQAVLVTGI 61

Query: 69 TPQ-EARAKGENEAAFAARIHS 89
           PQ  A + G  EA FAA IH+
Sbjct: 62 LPQTLASSGGRPEAEFAALIHA 83


>UniRef50_A0Z9I3 Exonuclease n=1 Tax=marine gamma proteobacterium HTCC2080
          RepID=A0Z9I3_9GAMM
          Length = 483

 Score =  108 bits (271), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 55/85 (64%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
               +F +HDYET G +   DRP QFA +RTD  FNVI EP V YC+P+ D L  P A+
Sbjct: 1  MSSSESFYWHDYETSGANVFEDRPLQFAGVRTDKNFNVISEPLVHYCRPSPDCLLHPAAI 60

Query: 64 LITGITPQEARAKGENEAAFAARIH 88
           +TGI+P +A A+G NE AF A+I 
Sbjct: 61 RVTGISPYKALAEGANEGAFMAKIQ 85


>UniRef50_A4IYM7 Exonuclease n=19 Tax=Francisella RepID=A4IYM7_FRATW
          Length = 482

 Score =  101 bits (252), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
               T LF+D ET G + + D+  QFAAIRTD +FN I E   F+ K   D  P P A 
Sbjct: 1  MFSNQTLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEI-ERFNFFVKLNPDTTPSPMAT 59

Query: 64 LITGITPQEARAKGENEAAFAARIHS 89
          +   I+  +A   G  E     +IH 
Sbjct: 60 ITHHISIAQA-NTGIAEYQAIRKIHK 84


>UniRef50_B6J811 Exodeoxyribonuclease I n=7 Tax=Gammaproteobacteria
          RepID=B6J811_COXB1
          Length = 458

 Score =  100 bits (250), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          ++ + T+LF+D ET G +   D+  QFAAIRTD   N +        +   D +P P A+
Sbjct: 2  SNHRKTYLFYDLETTGLNKCFDQIIQFAAIRTDEALNELNRH-EILIRLNPDVIPSPEAM 60

Query: 64 LITGITPQEARAKGENEAAFAARIH 88
          +I   +  +  + G+ E      IH
Sbjct: 61 IIHRFSIDQMLS-GKAEIEAIREIH 84


>UniRef50_C0QKN8 SbcB n=1 Tax=Desulfobacterium autotrophicum HRM2
          RepID=C0QKN8_DESAH
          Length = 471

 Score = 98.8 bits (245), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           TFLF+D ET G +PA D+   FAAIRTD E   I           +D +P PGA +   
Sbjct: 2  KTFLFYDIETSGLNPAFDQILTFAAIRTDLELREIDRT-SIVISLRNDIVPSPGAFITHR 60

Query: 68 ITPQEARAKGENEAAFAARIH 88
          +TP++ +  G  E    A IH
Sbjct: 61 LTPEDLKD-GLCEYQGVALIH 80


>UniRef50_B5K7E4 Exodeoxyribonuclease I n=3 Tax=Rhodobacteraceae
          RepID=B5K7E4_9RHOB
          Length = 500

 Score = 93.8 bits (232), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G  PA D+P QFAAI TD  F          C+ A   LP P A+++T +T
Sbjct: 3  FVFYDLETTGLSPAFDQPLQFAAIYTDENFVEKDR-VNIRCRLAPHILPSPQALVVTRVT 61

Query: 70 PQEARAKGENE-AAFAARI 87
          P +           F+ ++
Sbjct: 62 PDQLTDPSLPSLFEFSQQV 80


>UniRef50_A1ZTJ0 Exodeoxyribonuclease I, putative n=1 Tax=Microscilla marina ATCC
          23134 RepID=A1ZTJ0_9SPHI
          Length = 487

 Score = 91.9 bits (227), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
          K    +F+D  + G +P  D+  +     TD  FN++ E      K   D +P P A++ 
Sbjct: 19 KNKNLVFYDTRSSGDNPVFDQILRADTYVTDHAFNLL-ETHHIEIKKRPDVVPSPEALIA 77

Query: 66 TGITPQEARAKGENEAAFAARIH 88
              P +  AKG  E      IH
Sbjct: 78 NNWLPSDL-AKGSTEYEAMRHIH 99


>UniRef50_A3XEM3 Exonuclease I n=3 Tax=Rhodobacteraceae RepID=A3XEM3_9RHOB
          Length = 459

 Score = 91.5 bits (226), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G  P  D+P QFAAI TD  F          C+ A   LP P A+++T +T
Sbjct: 3  FVFYDLETTGISPEFDQPLQFAAIWTDENFVEKDR-VNIRCRLAPHILPSPQALVVTRVT 61

Query: 70 PQEARAKGENE-AAFAARI 87
          P +           F+ ++
Sbjct: 62 PDQLIDPSLPSLFEFSQQV 80


>UniRef50_B4WCZ9 Exonuclease family n=1 Tax=Brevundimonas sp. BAL3
          RepID=B4WCZ9_9CAUL
          Length = 476

 Score = 91.1 bits (225), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F+D ET G     D+  QFAAI TD + N +       C+     +P P A+L   ++
Sbjct: 3  FVFYDTETTGLSKGFDQIVQFAAIHTDGDLNELDR-FELRCRLQPHVVPHPKAMLANRLS 61

Query: 70 PQEARAKGEN-EAAFAARI 87
           +                I
Sbjct: 62 IERLTDLSLPSHYDMVREI 80


>UniRef50_B9NSM4 Exodeoxyribonuclease I n=1 Tax=Rhodobacteraceae bacterium KLH11
          RepID=B9NSM4_9RHOB
          Length = 469

 Score = 87.6 bits (216), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F F D ET GT PA D+P QFA I TD     + E     C+ +   LP P A+ +TG++
Sbjct: 2  FAFFDLETSGTSPAFDQPLQFAGILTDDTLEEV-ERIDIRCRLSPHILPAPWALAVTGVS 60

Query: 70 PQEARAKGENEA-AFAARIHS 89
          P          A  F+  + S
Sbjct: 61 PGMLSNPNLPSAFEFSQEVSS 81


>UniRef50_Q07NS2 Exodeoxyribonuclease I subunit C n=5 Tax=Alphaproteobacteria
          RepID=Q07NS2_RHOP5
          Length = 490

 Score = 84.6 bits (208), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F+F D ET G     D+   FAAIRTD++ N          +     +P P A+    ++
Sbjct: 3  FVFFDTETTGLRHGFDQIVHFAAIRTDNDLNETDR-FEVRSRLLPHVVPHPSALRTNRLS 61

Query: 70 PQEARAKGEN-EAAFAARIH 88
           +                I 
Sbjct: 62 IERLIDGTLPSHYEMVRAIQ 81


>UniRef50_C1TRP3 Exonuclease, DNA polymerase III, epsilon subunit family n=1
          Tax=Dethiosulfovibrio peptidovorans DSM 11002
          RepID=C1TRP3_9BACT
          Length = 193

 Score = 81.1 bits (199), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M  +     F+  D ET G     DR  +  AIR    F    E E F    +       
Sbjct: 1  MDKSLWDSGFVAIDVETTGLSNRWDRIVEIGAIR----FTPGSETESFQTFVSPGRPIPS 56

Query: 61 GAVLITGITPQEAR-AKGENEAAFA 84
           AV I GIT +    A G +EA+ A
Sbjct: 57 EAVAIHGITDEMVEGAPGLSEASIA 81


>UniRef50_Q83GA7 Oligoribonuclease n=2 Tax=Tropheryma whipplei RepID=ORN_TROWT
          Length = 184

 Score = 80.3 bits (197), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M         ++ D E  G +P  D   + A + TD +   + E       P+ + L   
Sbjct: 1  MCVAPTPSHLVWVDCEMTGLNPERDELLEVAVVVTDKDLLPLDEGVNVVVSPSSEALGAM 60

Query: 61 GAVL-----ITGITPQEARAKGENEAAFAAR 86
             +     ++G+  + +     +EA    +
Sbjct: 61 DNYVARMHRVSGLLDELSNGVPVSEAQAMVK 91


>UniRef50_C0DYM7 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
           23834 RepID=C0DYM7_EIKCO
          Length = 238

 Score = 79.5 bits (195), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           T         + D E  G +P  DR  + A + TD++ N++ + E +    +D+ L    
Sbjct: 46  TPKPNPLNLCWLDMEMTGLNPEHDRIIEAAVVITDADLNILAQSESYAIHQSDELLEGMD 105

Query: 62  AVLI-----TGITPQEARAKGENEAAFAARI 87
           A        TG+T Q  +    +EA    R+
Sbjct: 106 AWNTSTHERTGLT-QRVKDSTLSEAEVEQRL 135


>UniRef50_A2R5F8 Remark: it is assumed (Fragment) n=1 Tax=Aspergillus niger CBS
           513.88 RepID=A2R5F8_ASPNC
          Length = 298

 Score = 79.2 bits (194), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/52 (100%), Positives = 52/52 (100%)

Query: 38  EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS 89
           EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS
Sbjct: 124 EFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHS 175


>UniRef50_C7H6D8 DNA polymerase III, alpha subunit n=4 Tax=Clostridiales
          RepID=C7H6D8_9FIRM
          Length = 244

 Score = 78.4 bits (192), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIR---TDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          K    +F D ET G      +  + AAIR   T+     + +    + K  +        
Sbjct: 10 KYKAVVFFDTETTGLEAESCQIIELAAIRVEKTERGTLRMADSADVFVKLPEGERIPQKI 69

Query: 63 VLITGITPQEARAKGENEAAFAARI 87
          V +TGIT ++   +G  EA  AAR 
Sbjct: 70 VELTGITDEQLENEGITEAEAAARF 94


>UniRef50_A5IXK4 DNA polymerase III alpha subunit n=1 Tax=Mycoplasma agalactiae PG2
           RepID=A5IXK4_MYCAP
          Length = 1459

 Score = 77.6 bits (190), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 4   TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
             K  +++  D ET G  P      +F A+  + +   +GE   F+ KP           
Sbjct: 419 NFKDYSYVSFDIETTGLSPKFHEIIEFGAVDINQDL-KVGEVTQFFIKPQ--AKIGAFTT 475

Query: 64  LITGITPQEARAKGENEAAFAARIH 88
            +TGIT Q   ++G +      RI+
Sbjct: 476 ELTGITQQMLDSEGLSIKDGLQRIY 500


>UniRef50_D0RRC0 Exodeoxyribonuclease I n=1 Tax=alpha proteobacterium HIMB114
          RepID=D0RRC0_9RICK
          Length = 473

 Score = 77.2 bits (189), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           ++F+D+ET G     D+  Q  AI  +  F+++       C      +P+PGA+L+   
Sbjct: 2  NYVFYDFETTGRSSTWDQIIQVGAILVNDTFDILDR-FEARCSLKPGTVPEPGALLVNKT 60

Query: 69 TPQEARAKGENEAAFAA 85
          TP   +    +      
Sbjct: 61 TPDMLKKTNLSHFGMVQ 77


>UniRef50_C7G6P2 DNA polymerase III PolC-type n=1 Tax=Roseburia intestinalis L1-82
          RepID=C7G6P2_9FIRM
          Length = 228

 Score = 72.6 bits (177), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 2/78 (2%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             +F D ET G  P  D+  + AA       N I      +CK  +        V +T 
Sbjct: 5  KKIVFFDTETTGLDPEKDQIIELAAALVTE--NGIELKIDAFCKLPEGEKIPEKIVELTH 62

Query: 68 ITPQEARAKGENEAAFAA 85
          IT      KG +      
Sbjct: 63 ITDDMLADKGIDYREACR 80


>UniRef50_UPI000186E428 oligoribonuclease, putative n=1 Tax=Pediculus humanus corporis
          RepID=UPI000186E428
          Length = 196

 Score = 72.2 bits (176), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GAVLITG 67
          +++ D E  G +P  D   + A I T+ + N + E   F     D+ L       L+  
Sbjct: 23 YIWIDLEMTGLNPETDTILEVACIITEPDLNPLNEGMHFVIHQNDNVLKSMNEWCLVHH 81


>UniRef50_A6DIP6 Exonuclease n=1 Tax=Lentisphaera araneosa HTCC2155
          RepID=A6DIP6_9BACT
          Length = 261

 Score = 71.8 bits (175), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          + Q   +F D ET G +P  DR  +   I+   +    G+ ++   +   +      A  
Sbjct: 4  NLQRPIVFFDLETTGLNPTEDRIIEICCIKVHPD----GKRDIKTRRVNPEKPISSEASE 59

Query: 65 ITGITPQEARAKGENEAAFAARIHS 89
          ITGIT ++ + +       A  I+ 
Sbjct: 60 ITGITDEDVKDEP-TFKQMAKGIYK 83


>UniRef50_B3PN84 DNA polymerase III subunit alpha n=2 Tax=Mycoplasma
           RepID=B3PN84_MYCA5
          Length = 1438

 Score = 71.1 bits (173), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 5/83 (6%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              T++  D ET G  P  +   +F A   ++   +I E   F+ KP       P    I
Sbjct: 401 SSQTYVVFDLETTGLSPRFNEIIEFGASIIEN--GIIKESHQFFIKPTK--PIPPSITEI 456

Query: 66  TGITPQEARAKGENEAAFAARIH 88
           T IT     A G ++     +I+
Sbjct: 457 TKITD-NTVANGYSQEEGVRKIY 478


>UniRef50_A5UUT9 DNA polymerase III, epsilon subunit n=4 Tax=Chloroflexaceae
           RepID=A5UUT9_ROSS1
          Length = 233

 Score = 69.9 bits (170), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +   D ET G +P  D       +  D     + +      +P DD    P A+ + G+ 
Sbjct: 38  YSVIDVETTGLNPRRDALLAIGLVDIDDGRIRMDQRWYTLVRPPDDAPVNPEAIRVHGLL 97

Query: 70  PQEARAKGEN 79
           PQ+       
Sbjct: 98  PQDVEQAPPP 107


>UniRef50_Q47TJ3 DNA polymerase III, epsilon subunit n=10 Tax=Actinomycetales
          RepID=Q47TJ3_THEFY
          Length = 250

 Score = 69.5 bits (169), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 3/78 (3%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +  D ET G +   DR    A I T ++ +                   P AV I GI+
Sbjct: 16 LVGFDIETTGINLEQDRVVTAAIIETAADGSQRTRRTWL---VNPGVEIPPEAVAIHGIS 72

Query: 70 PQEARAKGENEAAFAARI 87
           + A A G       A I
Sbjct: 73 TELAVADGIPAPVAVAEI 90


>UniRef50_D1N2X3 DNA polymerase III, epsilon subunit n=1 Tax=Victivallis vadensis
          ATCC BAA-548 RepID=D1N2X3_9BACT
          Length = 185

 Score = 68.4 bits (166), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 4/65 (6%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F   D ET G  P  DR  + AA+R D +    G    F             AV +  IT
Sbjct: 9  FTIFDVETTGMSPVRDRIVELAAVRVDRD----GSLSRFQSLVNPGVRIPAQAVAVHHIT 64

Query: 70 PQEAR 74
               
Sbjct: 65 DDMVA 69


>UniRef50_Q0JYK3 Putative exonuclease n=1 Tax=Ralstonia eutropha H16
           RepID=Q0JYK3_RALEH
          Length = 220

 Score = 68.0 bits (165), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 3/79 (3%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
              F+  D ET G         +  AIR +   N     + F                +T
Sbjct: 49  PERFVVFDIETTGLDSERHEILEIGAIRVNRNSN---NHDTFQVLVKPSRKVPKKITELT 105

Query: 67  GITPQEARAKGENEAAFAA 85
           GITP+   A+G +  +   
Sbjct: 106 GITPEMIEAEGVSLESAVQ 124


>UniRef50_B5ZV55 DNA polymerase III, epsilon subunit n=23 Tax=Alphaproteobacteria
          RepID=B5ZV55_RHILW
          Length = 245

 Score = 68.0 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          +  D ET G     DR  +   I   + F   G     Y  P D  +  P A+ + GIT 
Sbjct: 4  IIFDTETTGLDNRADRIIEIGGIELFNHF-PTGNVIHIYINPGDQKV-HPDALAVHGITD 61

Query: 71 QEARAKGENEAAFAARI 87
          +  + K +  A  A  I
Sbjct: 62 EFLKDK-KPFAEVAEEI 77


>UniRef50_Q3B5G9 Exonuclease n=3 Tax=Chlorobium/Pelodictyon group
          RepID=Q3B5G9_PELLD
          Length = 197

 Score = 67.6 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             L+ D ET G  P      QFA +       V+ E      +P +  + +  A+ ++G
Sbjct: 2  KKVLWFDLETTGIDPDRHGIIQFAGLAEIE--GVVAESFEIKMQPHEGAMIEDEALAVSG 59

Query: 68 ITPQEARAKGENEAAFAARI 87
           + ++  +     A     I
Sbjct: 60 FSREQIASF-TPHAEAYKAI 78


>UniRef50_Q6KIN3 DNA polymerase III alpha subunit n=1 Tax=Mycoplasma mobile
           RepID=Q6KIN3_MYCMO
          Length = 1433

 Score = 67.2 bits (163), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           K  T++  D ET G  P  D   +F A +  +    + +   F+ KP  +        LI
Sbjct: 396 KNETYVVFDLETTGLSPIFDDIIEFGAQKILN--GKVIDTLQFFVKPNKE--ISEKITLI 451

Query: 66  TGITPQEARAKGENEAAFAARI 87
           TGI  Q+      +E     +I
Sbjct: 452 TGIKNQDVE-NAISEKEALKKI 472


>UniRef50_UPI0001693F5B Exonuclease RNase T and DNA polymerase III n=3 Tax=Paenibacillus
          larvae subsp. larvae BRL-230010 RepID=UPI0001693F5B
          Length = 203

 Score = 66.8 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           +  +   D ET G  P  D+  + AAIRTD      G                P  V +
Sbjct: 1  MREIYTVFDLETTGLDPTKDQITEIAAIRTDL-IREYGR-LDIRITKNSGTKLTPEIVNL 58

Query: 66 TGITPQEARAKGENEAAFA 84
          TGI+ +     G  E    
Sbjct: 59 TGIS-ESMMRGGVPEPVAI 76


>UniRef50_A6VD64 Oligoribonuclease n=25 Tax=Proteobacteria RepID=ORN_PSEA7
          Length = 180

 Score = 66.8 bits (162), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 6/86 (6%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
               ++ D E  G  P  D   + A I TDS+ N + E  V      ++ L        
Sbjct: 3  NPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEWNT 62

Query: 66 -----TGITPQEARAKGENEAAFAAR 86
               +G+T Q  R    + A   A+
Sbjct: 63 RQHGQSGLT-QRVRESTVSMAEAEAQ 87


>UniRef50_A2SRZ3 Exonuclease, RNase T and DNA polymerase III n=1
          Tax=Methanocorpusculum labreanum Z RepID=A2SRZ3_METLZ
          Length = 228

 Score = 66.4 bits (161), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          L  D ET G +P +DR  + AAI+ D   N        Y    +D         +TGITP
Sbjct: 2  LIVDTETTGLNPKIDRITELAAIKFDKYGNK--SVMDEYISLPNDICYPENVQEMTGITP 59

Query: 71 QEARAKGENEAAFA 84
          +    KG  E   A
Sbjct: 60 EILELKGHPEEEIA 73


>UniRef50_A4NXF4 Oligoribonuclease n=1 Tax=Haemophilus influenzae 22.4-21
          RepID=A4NXF4_HAEIN
          Length = 115

 Score = 65.7 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GA 62
          +  +   ++ D E  G  P  +R  + A I TD   N++ E  V     +D+ L +    
Sbjct: 2  SFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDW 61

Query: 63 VLITGI---TPQEARAKGENEAAF 83
             T       +  +A    E A 
Sbjct: 62 CQKTHSENGLIERVKASKLTERAA 85


>UniRef50_A4GJC0 Exodeoxyribonuclease I n=1 Tax=uncultured marine bacterium
          EB0_49D07 RepID=A4GJC0_9BACT
          Length = 469

 Score = 65.7 bits (159), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 3/79 (3%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
              +F+D ET G      +  Q  +I+T+    ++ E +   C P    +P P A++  
Sbjct: 4  SSNLIFYDTETTGLLKDFSQILQCGSIQTNRSLEILHE-QNLGCAPLPWAIPYPMAMVTN 62

Query: 67 GITPQEARAKGENEAAFAA 85
            T         +      
Sbjct: 63 KKT--NLFHSNVSHYELMR 79


>UniRef50_A5UFF2 Oligoribonuclease n=25 Tax=cellular organisms RepID=ORN_HAEIG
          Length = 182

 Score = 65.7 bits (159), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 4/84 (4%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GA 62
          +  +   ++ D E  G  P  +R  + A I TD   N++ E  V     +D+ L +    
Sbjct: 2  SFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDW 61

Query: 63 VLITGI---TPQEARAKGENEAAF 83
             T       +  +A    E A 
Sbjct: 62 CQKTHSENGLIERVKASKLTERAA 85


>UniRef50_Q7PD30 AGAP012804-PA n=10 Tax=Endopterygota RepID=Q7PD30_ANOGA
          Length = 228

 Score = 64.9 bits (157), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M++T  Q   ++ D E  G     DR  + A I TDS+ N+I +         D  L   
Sbjct: 38 MSETSVQ-NLVWIDLEMTGLDVEKDRILEIACIVTDSKLNIIAKGPNIIINEPDAVLAGM 96

Query: 61 GAV 63
           + 
Sbjct: 97 NSW 99


>UniRef50_Q9Y3B8 Oligoribonuclease, mitochondrial n=17 Tax=Euteleostomi
           RepID=ORN_HUMAN
          Length = 237

 Score = 64.5 bits (156), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 1/63 (1%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GAVL 64
                ++ D E  G     D+  + A + TDS+ N++ E      K  D+ L        
Sbjct: 39  MAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCK 98

Query: 65  ITG 67
              
Sbjct: 99  EHH 101


>UniRef50_Q4SLB2 Chromosome 7 SCAF14557, whole genome shotgun sequence. (Fragment)
          n=1 Tax=Tetraodon nigroviridis RepID=Q4SLB2_TETNG
          Length = 248

 Score = 64.5 bits (156), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 20/93 (21%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP----- 60
               ++ D E  G     D+  + A + TDS+ N++ E         D+ L        
Sbjct: 2  MSQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIINQPDELLDGMSEWCK 61

Query: 61 ---------GAVLITGITPQEARAKGENEAAFA 84
                    AV  + IT ++A      E  F 
Sbjct: 62 EHHGKSGLTQAVRNSKITLEQA------EYEFL 88


>UniRef50_Q2RJC1 DNA polymerase III, epsilon subunit n=1 Tax=Moorella
          thermoacetica ATCC 39073 RepID=Q2RJC1_MOOTA
          Length = 921

 Score = 63.8 bits (154), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
            T++  D ET G  PA DR  + AA+R             F           P    +T
Sbjct: 3  PQTYVVLDVETTGLDPARDRIIEIAAVR----LEGGNITRQFQTLVNPGRPIPPAIERLT 58

Query: 67 GITPQEA-RAKGENE 80
          GI+      A    E
Sbjct: 59 GISDAMVREAPPLPE 73


>UniRef50_B8GAH5 DNA polymerase III, epsilon subunit n=1 Tax=Chloroflexus aggregans
           DSM 9485 RepID=B8GAH5_CHLAD
          Length = 233

 Score = 63.0 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +   D ET G  P  D      A+  ++   ++ +      +P     P   ++ +  +T
Sbjct: 38  YTVIDVETTGLDPRHDALIAIGAVNVENGRVLLKQTWHSLIRPPPGREPSVESIRVHHLT 97

Query: 70  PQEARAKGENEAAFAARI 87
           P+E R      A   A +
Sbjct: 98  PEELRDAP-PPAEVLAEL 114


>UniRef50_Q9ZVE0 Oligoribonuclease n=4 Tax=Embryophyta RepID=ORN_ARATH
          Length = 222

 Score = 63.0 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 6/92 (6%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           + D D +   ++ D E  G +  +DR  + A I T+ +     E      +   D L + 
Sbjct: 37  LEDGDYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCLDKM 96

Query: 61  -GAVLIT----GITPQEARAKGENEAAFAARI 87
                      G+T ++       E     ++
Sbjct: 97  DDWCQTHHGASGLT-KKVLLSAITEREAEQKV 127


>UniRef50_A6DVI9 Putative exonuclease n=2 Tax=Roseovarius RepID=A6DVI9_9RHOB
          Length = 688

 Score = 62.6 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 26/84 (30%), Gaps = 4/84 (4%)

Query: 6   KQPTFLFHDYETFGTHPA-LDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
              +F+  D ET G  P   D   Q A +R  +   + GE               P +  
Sbjct: 490 SDLSFVVFDTETTGLSPRGGDEIVQIAGLRIVNGRILRGESFDMLV--NPGRPIPPASTR 547

Query: 65  ITGITPQEARAKGENEAAFAARIH 88
           +  I+    +    +      R H
Sbjct: 548 VHHISDDMVQDAP-DIIEAGRRFH 570


>UniRef50_A3JF32 Oligoribonuclease n=3 Tax=cellular organisms RepID=A3JF32_9ALTE
          Length = 180

 Score = 62.6 bits (151), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 6/82 (7%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI---- 65
           ++ D E  G  P  +R  + A + TDSE N+I E  V     +D  +            
Sbjct: 7  LVWIDLEMTGLDPEQERIIEMATLITDSELNLIAEGPVLAVHQSDTLMGAMDEWCTRTHG 66

Query: 66 -TGITPQEARAKGENEAAFAAR 86
           +G+T Q       +EA    +
Sbjct: 67 ESGLT-QRVTDSRISEAEAEQQ 87


>UniRef50_Q14JL3 Oligoribonuclease n=21 Tax=Gammaproteobacteria RepID=ORN_FRAT1
          Length = 178

 Score = 62.2 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 6/84 (7%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI--- 65
            ++ D E  G      +  + AAI TD + N+I E E       D+ L       I   
Sbjct: 6  NLIWIDLEMTGLDVDSCKITEIAAIITDKDLNIIAEAEPIAIYQPDEVLANMNEWCIKTH 65

Query: 66 --TGITPQEARAKGENEAAFAARI 87
            TG+T Q  +    +  A   +I
Sbjct: 66 TETGLT-QRVKDSKISTEAAEQQI 88


>UniRef50_Q31HZ4 Oligoribonuclease n=12 Tax=Gammaproteobacteria RepID=ORN_THICR
          Length = 184

 Score = 61.8 bits (149), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
             +   ++ D E  G     D+  + A + TD+E NV+ E  V   +    YL    A 
Sbjct: 1  MKSENNLIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAW 60

Query: 64 LITG 67
            T 
Sbjct: 61 CTTH 64


>UniRef50_Q7XVQ9 OSJNBa0079M09.9 protein n=11 Tax=Magnoliophyta RepID=Q7XVQ9_ORYSJ
          Length = 249

 Score = 61.8 bits (149), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 4/90 (4%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP- 60
           + +D     ++ D E  G     DR  + A I TD +     E      + + + +    
Sbjct: 63  SSSDYDKPLVWIDLEMTGLDITKDRILEIACIITDGKLTKRIEGPDLVIRQSKECVNDMN 122

Query: 61  GAVLITGI---TPQEARAKGENEAAFAARI 87
               +        ++      +E     ++
Sbjct: 123 EWCKVHHSASGLKEKVLQSDISENDAEKQV 152


>UniRef50_Q13VF8 Oligoribonuclease n=293 Tax=Bacteria RepID=ORN_BURXL
          Length = 207

 Score = 61.1 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV-- 63
                ++ D E  G  P  DR  + A + T+S  + + E  V     +D+ L        
Sbjct: 16  SDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAIHQSDETLAGMDQWNQ 75

Query: 64  LITGIT--PQEARAKGENEAAFAARI 87
              G +      +A   +EA    +I
Sbjct: 76  NTHGRSGLIDRVKASTVSEADATEQI 101


>UniRef50_C7IIY1 DNA polymerase III, epsilon subunit n=1 Tax=Clostridium
           papyrosolvens DSM 2782 RepID=C7IIY1_9CLOT
          Length = 726

 Score = 61.1 bits (147), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           M +   +  F+  D ET G +P  D+  +  A++      ++     F            
Sbjct: 413 MKEHSLEDDFVVFDIETTGLNPHQDKITEIGAVKV-RNGQIVDR---FSAFVNPGVSIPS 468

Query: 61  GAVLITGITPQEARAKGENEA---AFAARIH 88
             V +TGIT    +     E     F   I 
Sbjct: 469 FIVKLTGITDDMVKDAPPVEQVLNEFMEFIQ 499


>UniRef50_Q2W728 DNA polymerase III n=4 Tax=Magnetospirillum RepID=Q2W728_MAGSA
          Length = 412

 Score = 59.5 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 6   KQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
           K  TF+  D ET G HP+  D+    A +R  +   + GE                 ++ 
Sbjct: 215 KSLTFVVFDTETTGLHPSQGDQIVSIAGVRIVNGRILSGESFNRIV--NPGRPIPAESIR 272

Query: 65  ITGITPQEARAK 76
             GIT      K
Sbjct: 273 YHGITDDMVVDK 284


>UniRef50_A1BAS5 DNA polymerase III, epsilon subunit n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1BAS5_PARDP
          Length = 659

 Score = 59.5 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 3/68 (4%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
             T +  D ET G  P  DR  Q A +R      + GE       P       P +  + 
Sbjct: 450 DLTCVVFDTETTGLDPVADRIVQIAGLRIARG-RLTGERFDTLVDP--GRPIPPASTAVH 506

Query: 67  GITPQEAR 74
           GIT     
Sbjct: 507 GITDAMVA 514


>UniRef50_Q47VZ4 Oligoribonuclease n=73 Tax=cellular organisms RepID=ORN_COLP3
          Length = 181

 Score = 59.5 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL--PQPGAV 63
               ++ D E  G  P  D   + A I TDSE N++ +  +F     DD L    P  +
Sbjct: 4  NDSNLIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNPWCI 63

Query: 64 LITGIT--PQEARAKGENEAAFAAR 86
             G +   Q  R    + A     
Sbjct: 64 EHHGKSGLTQRCRDSEVSLAHATKE 88


>UniRef50_D1N0X4 DNA polymerase III, epsilon subunit n=1 Tax=Victivallis vadensis
          ATCC BAA-548 RepID=D1N0X4_9BACT
          Length = 268

 Score = 59.1 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M +   +   +  D E+ G  P  DR  + A ++   +    G  +    +   +    P
Sbjct: 2  MQNLQLERPLVVFDIESTGVMPQRDRIVEIAVLKIFPD----GHTQNTVRRLNPEMPIPP 57

Query: 61 GAVLITGITPQEARA 75
          GA  I GI+  +   
Sbjct: 58 GATAIHGISDADVAD 72


>UniRef50_Q5SK39 DNA polymerase III epsilon chain-like protein n=2 Tax=Thermus
           thermophilus RepID=Q5SK39_THET8
          Length = 624

 Score = 59.1 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +   D ET G  P  D     A +        +   EVF           P A  + G+T
Sbjct: 440 YTAFDLETTGLDPEQDAVVALAGVHV--LGRRVLRQEVFEALVNPGRPISPAATAVHGLT 497

Query: 70  PQEARAKGENEA 81
            +  R K   EA
Sbjct: 498 AEMLRDKPPLEA 509


>UniRef50_C1FD33 Exonuclease and DNA helicase n=3 Tax=cellular organisms
           RepID=C1FD33_9CHLO
          Length = 1473

 Score = 59.1 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           P  +  D ET G +   +R  + AA+          +P      P    +P P  V +TG
Sbjct: 293 PCVVVFDLETTGLNKDRNRIIEIAAVNVSD---PTHQPMSTLVNPGRFAVPPP-VVALTG 348

Query: 68  ITPQEARAKGENEAAFAARI 87
           IT     A        AA +
Sbjct: 349 ITNAMVSAPAVPSFQRAAEL 368


>UniRef50_Q0A6Z2 Putative PAS/PAC sensor protein n=1 Tax=Alkalilimnicola ehrlichii
           MLHE-1 RepID=Q0A6Z2_ALHEH
          Length = 714

 Score = 59.1 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 7   QPTFLFHDYETFGTHPA-LDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
             +F+  D E  G +P   D     A +R  +   + GE               PG+V  
Sbjct: 506 DLSFVVFDCEMTGLNPEGGDEIISIAGVRVVNGRVLTGETFDRII--NPGRPIPPGSVRF 563

Query: 66  TGITPQEARAKGENE 80
            GIT  + + K   E
Sbjct: 564 HGITDDDVQDKPPIE 578


>UniRef50_Q1IXC1 DNA polymerase III, epsilon subunit n=2 Tax=Deinococcus
          RepID=Q1IXC1_DEIGD
          Length = 180

 Score = 59.1 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPAD---DYLPQPG-AVL 64
            +  D ET G  P  D   +  A+R      V  E      +P +   + +P P  A  
Sbjct: 2  NVVVFDLETTGLSPERDAIVEIGALRVVDGRVVESERFETLVRPQNAAGEVVPIPWRAQR 61

Query: 65 ITGITPQEARA 75
          + GI+    + 
Sbjct: 62 VHGISDAMVQD 72


>UniRef50_UPI00015B5BB5 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia
          vitripennis RepID=UPI00015B5BB5
          Length = 188

 Score = 58.7 bits (141), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 1/83 (1%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M++  ++   ++ D E  G     DR  + A + TD   N++ +        +DD L + 
Sbjct: 1  MSNNQRRNRIVWIDMEMTGLAVESDRILEVACLITDENLNIVSDEFHQVLHQSDDELARM 60

Query: 61 -GAVLITGITPQEARAKGENEAA 82
                         A  +++  
Sbjct: 61 NEWCQEHHTKSGLVEASKKSQED 83


>UniRef50_Q5P0T5 Oligoribonuclease n=18 Tax=Proteobacteria RepID=ORN_AZOSE
          Length = 183

 Score = 58.4 bits (140), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV--L 64
          Q   ++ D E  G  P  DR  + A + TDS+ N + E  V      D  L         
Sbjct: 5  QNHLIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDEWNRN 64

Query: 65 ITGIT--PQEARAKGENEAAFAAR 86
            G +      +A    EA   A+
Sbjct: 65 THGKSGLTDRVKASLIGEADAEAQ 88


>UniRef50_O68045 DNA polymerase III subunit epsilon-like protein n=6
           Tax=Rhodobacteraceae RepID=DPO3E_RHOCA
          Length = 704

 Score = 58.4 bits (140), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 31/91 (34%), Gaps = 5/91 (5%)

Query: 1   MTDTDKQP-TFLFHDYETFGTHPA-LDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP 58
           + +T     TF+  D ET G  P   D   Q AA+R  +   V GE              
Sbjct: 500 LAETPLDKLTFVVFDTETTGLFPTGGDEIVQIAAVRIVNGRRVAGEVFDTLV--NPGRPI 557

Query: 59  QPGAVLITGITPQEARAKGENEAAFAARIHS 89
              +  + GIT +   A     A    R H 
Sbjct: 558 PAASTAVHGIT-EAMVATAPAIAEVGRRFHK 587


>UniRef50_Q8EUK5 DNA polymerase III subunit alpha n=1 Tax=Mycoplasma penetrans
           RepID=Q8EUK5_MYCPE
          Length = 1458

 Score = 58.4 bits (140), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 5/86 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
                  T++  D ET G  P  D+  +F AI+      V    E        +      
Sbjct: 413 DTKISDATYVIFDIETTGLSPYYDKIIEFGAIKYHKGVQV----ESIQMFINPEEKISDK 468

Query: 62  AVLITGITPQEARAKGENEAAFAARI 87
              IT I+ ++ +           +I
Sbjct: 469 IFAITKISNEDVKD-ALKIKEALVKI 493


>UniRef50_A5KRR8 Oligoribonuclease n=2 Tax=candidate division TM7
          RepID=A5KRR8_9BACT
          Length = 184

 Score = 58.0 bits (139), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 7/87 (8%)

Query: 2  TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           D  K    L+ D E  G  P  DR  + AAI TD  F  +          +   L    
Sbjct: 5  ADMKKHAKLLWLDLEMTGLDPQRDRVLEVAAIATDWNFEEMA-VIESVVHQSPKVLDLMD 63

Query: 62 AV-----LITGITPQEARAKGENEAAF 83
                   +G+T +  RA   +E   
Sbjct: 64 DWVRSQHASSGLT-ERVRASDVSETDA 89


>UniRef50_D0B846 Exonuclease n=51 Tax=Alphaproteobacteria RepID=D0B846_BRUME
          Length = 332

 Score = 58.0 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 2/79 (2%)

Query: 11  LFHDYETFGTHPALDRPAQFAAI--RTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           +  D ET G +PA +   +  A+  R   + ++      F                ITGI
Sbjct: 74  VVVDTETTGLNPAQEEIIEIGAVAFRYADDGSIGDVCATFGALQQPSKPIPAEITRITGI 133

Query: 69  TPQEARAKGENEAAFAARI 87
           T +  + +        A I
Sbjct: 134 TDEMVKGRTIPRDELDALI 152


>UniRef50_C2BLZ4 DNA polymerase III subunit epsilon n=6 Tax=Corynebacterium
          RepID=C2BLZ4_9CORY
          Length = 221

 Score = 58.0 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          T  +P F   D ET G +   DR  + AA+R DS FN I         P    +      
Sbjct: 15 TPGEPVFAVIDTETTGFNKRYDRIIELAAVRADSHFNPIDS-WHTLLNPDGKAIKNSH-- 71

Query: 64 LITGITPQEA 73
           I GIT    
Sbjct: 72 -IHGITNDMV 80


>UniRef50_A5IJJ8 DNA polymerase III polC-type n=7 Tax=Thermotogaceae
           RepID=DPO3_THEP1
          Length = 1367

 Score = 57.6 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
             + +  TF+  D+ET G  P +D   +  A++   +  ++ E      KP+ +      
Sbjct: 350 DSSFENATFVVLDFETTGLDPQVDEIIEIGAVKI-QDGQIVDE-YHTLIKPSRE--ISRR 405

Query: 62  AVLITGITPQEARAK 76
           +  ITGIT +    K
Sbjct: 406 SSEITGITQEMLENK 420


>UniRef50_D1PV56 DNA-directed DNA polymerase III epsilon subunit n=9
          Tax=Prevotella RepID=D1PV56_9BACT
          Length = 287

 Score = 57.6 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          +     +  D ET G   A DR  Q + I+ D + N   E +  +     +    P    
Sbjct: 4  NLTKPLIIFDLETTGLDLATDRIIQISYIKVDPQGN--EERKSLFV--NPEKPIPPFVQE 59

Query: 65 ITGITPQEARA 75
          +T IT    + 
Sbjct: 60 LTHITDDMVKD 70


>UniRef50_Q16B76 Exonuclease, putative n=3 Tax=Roseobacter RepID=Q16B76_ROSDO
          Length = 465

 Score = 57.6 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 2/69 (2%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
             TF+  D ET G  P  D   Q  A+R  +    I E EVF           PG+  + 
Sbjct: 270 DLTFVVFDSETTGLDPHTDEVVQLGAVRVVN--GKIIEGEVFDTLVNPGRTIPPGSTAVH 327

Query: 67  GITPQEARA 75
            I+      
Sbjct: 328 QISDAMVAD 336


>UniRef50_B9XHY8 DNA-directed DNA polymerase n=1 Tax=bacterium Ellin514
          RepID=B9XHY8_9BACT
          Length = 199

 Score = 57.6 bits (138), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 2/68 (2%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              ++  D ET G     D   Q AA+R      V+   + F+                
Sbjct: 1  MHQDYVIFDLETTGLSSYQDEIIQIAAVR--MSNGVVCSSDSFFSYVNPGRSISSFITSY 58

Query: 66 TGITPQEA 73
          TGIT Q+ 
Sbjct: 59 TGITNQDV 66


>UniRef50_A7HHL1 Exonuclease RNase T and DNA polymerase III n=1 Tax=Anaeromyxobacter
           sp. Fw109-5 RepID=A7HHL1_ANADF
          Length = 238

 Score = 57.2 bits (137), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           TF   D E  G  PA D      A+R  +   V+ E      KP +   P+   +LI G+
Sbjct: 46  TFTVLDCEMTGLDPARDEILSIGAVRIRNGRIVMAERFYQVFKPTEAVSPK-EVILIHGL 104

Query: 69  TPQEARAKGENEAAFAARI 87
            P E  ++G        R+
Sbjct: 105 GPDEV-SRGLPLGDALERL 122


>UniRef50_D2RJV7 DNA polymerase III, epsilon subunit n=1 Tax=Acidaminococcus
          fermentans DSM 20731 RepID=D2RJV7_ACIFE
          Length = 223

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 5/76 (6%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPA---DDYLPQPGAV 63
            T++  D ET G  P  D+  +  A+   +     G       +P    +     P   
Sbjct: 22 PDTYVVVDLETTGLDPERDQIIEIGALEVTA--GKRGRTFSTLLQPRTPLEGQYVSPFIT 79

Query: 64 LITGITPQEARAKGEN 79
           +TGIT +   A  + 
Sbjct: 80 RLTGITNEMLAAAPQP 95


>UniRef50_C4LI21 Putative uncharacterized protein n=1 Tax=Corynebacterium
           kroppenstedtii DSM 44385 RepID=C4LI21_CORK4
          Length = 616

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 7/80 (8%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
             TF+  D ET G     DR  +  A++         E   F        L  P    IT
Sbjct: 31  NTTFVVVDLETTGLSAHEDRIIEIGAVKIHGG----EEISRFSTFVDPGRLIPPLITNIT 86

Query: 67  GITPQEARAKGEN-EAAFAA 85
           GI+  +    G   EA    
Sbjct: 87  GISDDDV--NGAPKEAQAVK 104


>UniRef50_UPI0001C31300 Exonuclease RNase T and DNA polymerase III n=1 Tax=Conexibacter
          woesei DSM 14684 RepID=UPI0001C31300
          Length = 259

 Score = 57.2 bits (137), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
           D ET G  P  DR    AA+    +     + +              GA  + GIT   
Sbjct: 7  FDIETTGIDPQSDRIVT-AAVSLAGDARPTVDHDWL---VDPGVEIPAGATAVHGITTDH 62

Query: 73 ARAKGENEAAFAARIHS 89
          ARA+G   A     I +
Sbjct: 63 ARAEGRASAEAVEEITA 79


>UniRef50_C1AA06 Exonuclease n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AA06_GEMAT
          Length = 323

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 11  LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPA------DDYLPQPGAVL 64
           L  D ET G   A D   +F A+  D +    GE  V+   P               A  
Sbjct: 50  LVVDVETTGLDTARDVIIEFGAVPFDFD----GEGRVYTVHPPLSYFEDPGRPIPAEASA 105

Query: 65  ITGITPQEARAKGENEAAFAARI 87
           ITGIT  + R K  ++AA  A +
Sbjct: 106 ITGITDDDVRGKRIDDAAVLAAL 128


>UniRef50_A9KR66 DNA polymerase III, epsilon subunit n=1 Tax=Clostridium
          phytofermentans ISDg RepID=A9KR66_CLOPH
          Length = 235

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 5/79 (6%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           FL  D E+ G  P  DR  + AAIR           E F                +TGI
Sbjct: 2  NFLAIDIESTGLSPEKDRIIEIAAIRYIDG----KPKERFEKLINPGCPLPERITELTGI 57

Query: 69 TPQEARAKGENEAAFAARI 87
          T ++  A    E       
Sbjct: 58 T-EDMLAGAMTEREVIKEF 75


>UniRef50_Q9VCI0 Probable oligoribonuclease n=4 Tax=Drosophila RepID=ORN_DROME
          Length = 211

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 1/59 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GAVLITG 67
           ++ D E  G     D+  + A I TD + NV  E   F      +         +   
Sbjct: 38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHH 96


>UniRef50_D0B3W0 DNA polymerase III n=51 Tax=Rhizobiales RepID=D0B3W0_BRUME
          Length = 234

 Score = 56.8 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          +  D ET G     DR  +   +   + F   G     +  P       P A+ + GI+ 
Sbjct: 4  IVFDTETTGLERLEDRVIEIGGVELVNRF-PTGRTFHKFINPQ-GRQVHPDALAVHGISN 61

Query: 71 QEARAKGE 78
          ++   K  
Sbjct: 62 EQLLDKPV 69


>UniRef50_Q9PQB4 DNA polymerase III polC-type n=17 Tax=Ureaplasma RepID=DPO3_UREPA
          Length = 1442

 Score = 56.4 bits (135), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
                  T++  D ET G  P  D   +F A+   +    IGE   F+ KP         
Sbjct: 401 DQNLDNATYVIFDIETTGLFPNFDEIIEFGAVIMQNN-KQIGEKIQFFIKPIQQ--INEN 457

Query: 62  AVLITGITPQEARAKGENEAAFAARI 87
              +T I+ +       +E     +I
Sbjct: 458 VTNLTNISQEMV-NNAIDEKTALLKI 482


>UniRef50_D0LN23 Exonuclease RNase T and DNA polymerase III n=7 Tax=Haliangium
          ochraceum DSM 14365 RepID=D0LN23_HALO1
          Length = 180

 Score = 56.4 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 21/60 (35%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             +F D ET G  P      + AAIR   +        V   +P       P A+ + G
Sbjct: 2  QPLVFIDCETTGLDPERHEILEIAAIRVHPQTLDEERELVLRVRPERLEDADPEALEVNG 61


>UniRef50_B4W5N5 DNA polymerase III, epsilon subunit n=2 Tax=Caulobacteraceae
          RepID=B4W5N5_9CAUL
          Length = 241

 Score = 56.4 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 11 LFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          +  D ET G  P   DR  +   I    +    G     +     + L  P A+ + GIT
Sbjct: 5  IVLDTETTGFDPKTGDRLIEVGCIEI-QDLLPTGRTFHRFV--NPERLIPPDAIRVHGIT 61

Query: 70 PQEARA 75
            + + 
Sbjct: 62 DDKVKD 67


>UniRef50_A3XHM4 DNA polymerase III, epsilon subunit n=1 Tax=Leeuwenhoekiella
           blandensis MED217 RepID=A3XHM4_9FLAO
          Length = 221

 Score = 56.4 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           F+  D ET GT+   DR     A+        +      Y K     +    AV I GI 
Sbjct: 36  FVVFDTETTGTNAREDRMLSIGALELKGNKISLSSSFELYVKQE---VFNEEAVAIHGIL 92

Query: 70  PQEARAKGENEAAFAARI 87
            +  + K  +E       
Sbjct: 93  RENRKYKKVSEEEAVKAF 110


>UniRef50_A7HNS3 DNA polymerase III, alpha subunit n=2 Tax=Thermotogaceae
           RepID=A7HNS3_FERNB
          Length = 1390

 Score = 56.4 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 5/72 (6%)

Query: 4   TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
                T++  D ET G +P  D   +  A++T  +  VI E    + +P         ++
Sbjct: 377 NVDDYTYVVLDLETTGLNPRSDEIMEIGAVKT-RDGKVIDE-FHTFVRPNK---LNKKSL 431

Query: 64  LITGITPQEARA 75
            ITGIT    + 
Sbjct: 432 NITGITEDMLKD 443


>UniRef50_C6XFY8 DNA polymerase III subunit epsilon n=1 Tax=Candidatus
          Liberibacter asiaticus str. psy62 RepID=C6XFY8_LIBAP
          Length = 245

 Score = 56.4 bits (135), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 3/76 (3%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M   +K    +F D ET G     DR  +  A+    +++        +  P       P
Sbjct: 1  MIRKNKMRKIVF-DIETTGLDSKNDRIIEIGAVEL-LDYSKTNRTFQVFLCPN-GRKNSP 57

Query: 61 GAVLITGITPQEARAK 76
           A+ + GIT +  + K
Sbjct: 58 EALKLHGITDEFLKDK 73


>UniRef50_Q2Q0H1 Putative DNA polymerase type III, exonuclease domain n=1
          Tax=uncultured organism HF70_19B12 RepID=Q2Q0H1_9ZZZZ
          Length = 270

 Score = 56.0 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
           D ET G +P  DR  Q+A I  D + + + + E+              ++ + GI+ ++
Sbjct: 12 FDTETTGLNPRKDRILQYAFIGRDVDGSSVCQVELI----DPGIKIPEASMNVHGISNED 67

Query: 73 ARAKG 77
             +G
Sbjct: 68 VTGRG 72


>UniRef50_C4LJX7 Putative oligoribonuclease n=1 Tax=Corynebacterium kroppenstedtii
           DSM 44385 RepID=C4LJX7_CORK4
          Length = 222

 Score = 56.0 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI---- 65
            ++ D E  G  P+     + AAI TD+  N++ E         DD L +    +     
Sbjct: 25  IVWIDCEMTGLDPSTHVLVEIAAIVTDANLNILDEGLDIVIHATDDELAKMDDFVTQMHT 84

Query: 66  -TGITPQEARAK-GENEAA 82
             G+T +  ++     EA 
Sbjct: 85  KNGLTDEIRKSTVSVGEAE 103


>UniRef50_B9JNT5 Polymerase epsilon subunit protein n=1 Tax=Agrobacterium
           radiobacter K84 RepID=B9JNT5_AGRRK
          Length = 340

 Score = 56.0 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 2/66 (3%)

Query: 11  LFHDYETFGTHPALDRPAQFAAIR-TDSEFNVIGEPEVFY-CKPADDYLPQPGAVLITGI 68
           +  D ET G +   D   +   +  T  +F  IG+    Y           P    +TGI
Sbjct: 89  VILDTETTGLNHRNDEIIEIGLVAFTFDDFGHIGDVIGVYGGLQQPGTPIPPEITRLTGI 148

Query: 69  TPQEAR 74
           T +   
Sbjct: 149 TDEMVE 154


>UniRef50_A8LQ52 DNA polymerase III subunit epsilon n=2 Tax=Rhodobacterales
           RepID=A8LQ52_DINSH
          Length = 485

 Score = 56.0 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 24/76 (31%), Gaps = 3/76 (3%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ 59
           M        ++  D ET G  P   D   Q AA R  +    + + E+F           
Sbjct: 282 MDCKLGDLKYVIFDTETTGLLPERGDEVCQIAACRVVN--GKMVKTEMFDTLVNPGRPIP 339

Query: 60  PGAVLITGITPQEARA 75
             A  I GIT      
Sbjct: 340 LSATNIHGITDAMVAD 355


>UniRef50_B7Q099 YJER protein, putative (Fragment) n=1 Tax=Ixodes scapularis
           RepID=B7Q099_IXOSC
          Length = 171

 Score = 56.0 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 26/91 (28%), Gaps = 6/91 (6%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP- 60
                    ++ D E  G      +  + A + TD + N++ E         D+ L    
Sbjct: 29  AKAFCNNGLVWIDLELTGLELETCKIMEIACLVTDGQLNLLSEGIDIAIHQPDEVLEGMN 88

Query: 61  GAVLIT----GITPQEARAKGENEAAFAARI 87
                     G+T Q  R           R+
Sbjct: 89  DWCKEHHGKSGLT-QACRESSVTVEEAEQRV 118


>UniRef50_Q4FND4 Exodeoxyribonuclease I n=2 Tax=Candidatus Pelagibacter ubique
          RepID=Q4FND4_PELUB
          Length = 475

 Score = 56.0 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 27/81 (33%), Gaps = 1/81 (1%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
               D E+   + +     +   I  D  F  +     F C+  +  +PQ  A+++   
Sbjct: 2  NLAIWDIESSSANTSWGSIIEVGGILVDPNFKELDR-FNFRCRLPEGEVPQAMALIVNKT 60

Query: 69 TPQEARAKGENEAAFAARIHS 89
          +         +     +++ +
Sbjct: 61 SVDLLTKGNLSHYQMLSQLEA 81


>UniRef50_A1ZKT0 Exonuclease n=1 Tax=Microscilla marina ATCC 23134
          RepID=A1ZKT0_9SPHI
          Length = 245

 Score = 56.0 bits (134), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
          +   +F D ET GT    DR  Q A I+  ++   + +  +            P    + 
Sbjct: 4  KKPIVFFDLETTGTDTLNDRIVQIAIIKLAADGTKVEKERLI----NPTIPIPPEVTKVH 59

Query: 67 GITPQEARA 75
          G++ +  + 
Sbjct: 60 GVSDEMVKD 68


>UniRef50_Q600A7 DNA polymerase III, alpha chain n=4 Tax=Mycoplasma
           RepID=Q600A7_MYCH2
          Length = 1469

 Score = 55.7 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 5   DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
             +  F+  D ET G     +   +F A+   +   +  E   F+ KP     P      
Sbjct: 406 FDKLKFVIFDLETTGLSAFYNEIVEFGAVVLQNGIEI--EKHQFFIKPTGKIPPA--ITK 461

Query: 65  ITGITPQEARAKGENEAAFAARI 87
           ITGI+ +       +      +I
Sbjct: 462 ITGISQKMIDETAISWEIALEKI 484


>UniRef50_D0XIW2 DNA polymerase III, epsilon subunit n=1 Tax=Brevundimonas
          subvibrioides ATCC 15264 RepID=D0XIW2_9CAUL
          Length = 247

 Score = 55.7 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 11 LFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          +  D ET G  P   DR  +   I    +    G     +     + L    A+ + GIT
Sbjct: 5  IVLDTETTGFDPRTGDRLIEVGCIEI-LDLLPTGRTFHRFV--NPERLIPADAIRVHGIT 61

Query: 70 PQEARA 75
            + + 
Sbjct: 62 DDKVKD 67


>UniRef50_A1BCD0 DNA polymerase III, epsilon subunit n=1 Tax=Paracoccus
           denitrificans PD1222 RepID=A1BCD0_PARDP
          Length = 706

 Score = 55.7 bits (133), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 4/82 (4%)

Query: 9   TFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           ++   D ET G +PA  D   Q  A+R  +   + GE       P       P ++   G
Sbjct: 515 SYTVFDTETTGLNPAQGDEIIQIGALRILNGKLLRGERFDQLVDP--GREIPPESIPYHG 572

Query: 68  ITPQEARAKGENEAAFAARIHS 89
           I P+  + +    A      H+
Sbjct: 573 IHPEMVQGQPR-IAEVLPAFHA 593


>UniRef50_Q87E07 Oligoribonuclease n=123 Tax=Bacteria RepID=ORN_XYLFT
          Length = 193

 Score = 55.7 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 20/56 (35%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
               ++ D E  G     D   + A + TD++ NV+ E   F      + L    
Sbjct: 10 SDRRLIWIDLEMTGLDTHRDSIIEIATVVTDAQLNVLAEGPEFAISHPLNVLEAMD 65


>UniRef50_UPI0001C41BCD exonuclease n=1 Tax=Methanobrevibacter ruminantium M1
           RepID=UPI0001C41BCD
          Length = 261

 Score = 55.3 bits (132), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 4/76 (5%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
            +F D ET G +P   +  +   +    +  +I E +                  ITGIT
Sbjct: 46  IIFFDTETSGLNPNYCKIIELGMLVI-EDGKIIEEYDKLI---NIGERIDSTITRITGIT 101

Query: 70  PQEARAKGENEAAFAA 85
                 +G +E   A 
Sbjct: 102 NDMLIDEGVSEGDVAQ 117


>UniRef50_UPI0001792A17 PREDICTED: similar to small fragment nuclease n=1
          Tax=Acyrthosiphon pisum RepID=UPI0001792A17
          Length = 188

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 6/90 (6%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
           + +   ++ D E  G         + A I TD    V+ E        +D  L      
Sbjct: 9  MNNEHNIVWFDGEMTGLDCNHHTLIEAAIIITDKNLKVLAESPNIIIHQSDKVLENMEEW 68

Query: 64 L-----ITGITPQEARAKGENEAAFAARIH 88
                I+G+T +  R    +       ++
Sbjct: 69 SKKHHGISGLT-ENVRKSNISIEQADQMLY 97


>UniRef50_A0JYL8 DNA polymerase III, epsilon subunit n=8 Tax=Micrococcaceae
           RepID=A0JYL8_ARTS2
          Length = 254

 Score = 55.3 bits (132), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 13  HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
            D ET G +    R    +    D++ +VI E E               A  + G+T + 
Sbjct: 30  FDLETTGRNSRAARIVTASVTVVDADGSVITEHEWLA---DPGIEIPAEASEVHGVTTER 86

Query: 73  ARAKGENEAAFAARI 87
           AR +G   A     +
Sbjct: 87  ARLEGRPAAEVTREL 101


>UniRef50_A5EY86 DNA polymerase III, epsilon subunit n=1 Tax=Dichelobacter nodosus
          VCS1703A RepID=A5EY86_DICNV
          Length = 233

 Score = 55.3 bits (132), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 14/85 (16%)

Query: 11 LFHDYETFGTHPALD------RPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          +  D ET G +   D      R  +   +      + +     F+C    +    P A  
Sbjct: 6  VIFDTETTGMNFESDNKAEGHRIIEIGCVEL---IDRVPTEHYFHCYLNPEQPVDPQAFK 62

Query: 65 ITGITPQEARAKG-----ENEAAFA 84
          + GI+ +    K        E    
Sbjct: 63 VHGISDEFLADKPFFKDVLPEFEAY 87


>UniRef50_Q0BM06 DNA-directed DNA polymerase n=20 Tax=Francisella
          RepID=Q0BM06_FRATO
          Length = 238

 Score = 54.9 bits (131), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 11 LFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          +F D ET G    + +R  +F A+    +  + G    FYC P   Y  + GA+ I G+T
Sbjct: 13 VFIDTETTGFDYKIGNRIIEFGAVEV-IDRRITGNNLHFYCNPN--YKVEAGALAIHGLT 69

Query: 70 PQEARAKGENE 80
           +    K   E
Sbjct: 70 NEFLADKPLFE 80


>UniRef50_C9LHX7 Exonuclease n=1 Tax=Prevotella tannerae ATCC 51259
          RepID=C9LHX7_9BACT
          Length = 256

 Score = 54.9 bits (131), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 4/75 (5%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          MT  +     +F D E  G   A DR  + + I+   +     +   F      +     
Sbjct: 1  MTQLNLTRPIIFFDIEATGLQIARDRIVELSYIKVFPDGREESKTLRF----NPEMHISA 56

Query: 61 GAVLITGITPQEARA 75
           A  + GI  ++   
Sbjct: 57 EATAVNGIKDEDVAD 71


>UniRef50_A1VGE3 Exonuclease, RNase T and DNA polymerase III n=4 Tax=Desulfovibrio
           vulgaris RepID=A1VGE3_DESVV
          Length = 251

 Score = 54.9 bits (131), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           TF+  D E  G  P  D     A +    E  + G    F  K      P+  A+ + G+
Sbjct: 47  TFVVLDLEMTGLVPRRDAIIAVAGVTMRGERILAGR--CFEAKMRPHLPPEEDAIAVHGL 104

Query: 69  TPQEARAKGENEAAFAA 85
            P E     +   + AA
Sbjct: 105 LPDETATHDDPAESLAA 121


>UniRef50_C1DWW1 DNA polymerase III PolC-type (PolIII) n=4 Tax=Hydrogenothermaceae
          RepID=C1DWW1_SULAA
          Length = 205

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
          T ++ +FL  D ET G +P      + AA+R   E  ++ +      KP+  ++P     
Sbjct: 5  TIEEASFLIVDLETTGLNPVNSEIIEIAALRV--EGGIVVDKFHTLVKPSIGFIPT-YIT 61

Query: 64 LITGITPQEARAKGENEAAFAA 85
           +TGIT      K   E  F  
Sbjct: 62 KLTGITNALVVDKPTIEEVFPQ 83


>UniRef50_C9S0C0 DNA polymerase III, alpha subunit n=30 Tax=Bacteria
           RepID=C9S0C0_GEOSY
          Length = 1444

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
            + T++  D ET G     +   + AA++   +  +I     F       +      + +
Sbjct: 425 SEETYVVFDVETTGLSAVYNTIIELAAVKV-KDGEIIDRFMSFA---NPGHPLSVTTMEL 480

Query: 66  TGITPQEARAKGENEAAFAA 85
           TGIT +  +   + +   A 
Sbjct: 481 TGITDEMVKDAPKPDEVLAR 500


>UniRef50_A9NGM6 DNA polymerase III, epsilon subunit n=1 Tax=Acholeplasma
          laidlawii PG-8A RepID=A9NGM6_ACHLI
          Length = 227

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 6/84 (7%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAI---RTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
              L  D+ET G  P  D+  +  A+   +    + ++ E +    +            
Sbjct: 5  YKKILVFDFETTGLTPKRDKVIEVGAVLLEKIGDTYEIVQEIDYLIKQQTP---ITDFIS 61

Query: 64 LITGITPQEARAKGENEAAFAARI 87
           +TGIT +     G  E     ++
Sbjct: 62 NLTGITNEMLARDGVEEEYAFRQL 85


>UniRef50_C0A8I6 DNA-directed DNA polymerase n=1 Tax=Opitutaceae bacterium TAV2
          RepID=C0A8I6_9BACT
          Length = 197

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
            +  D ET G  P  +   Q AA+R   +  +  E    Y  P            +TGI
Sbjct: 2  NLVIFDLETTGFSPRWNDIIQIAAVRL-VDGRISDETFSTYVSPRRPVPDH--ITELTGI 58

Query: 69 TPQEARA 75
          T  +   
Sbjct: 59 TDADVAD 65


>UniRef50_UPI0001C36AB7 DNA polymerase III, alpha subunit n=1 Tax=Clostridium hathewayi DSM
           13479 RepID=UPI0001C36AB7
          Length = 264

 Score = 54.9 bits (131), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 7/82 (8%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
            ++  D ET G     D   + +A++  +      + E F            GA  + GI
Sbjct: 57  NYVVFDLETTGISAVKDDIIEISALKVKNH----EQVETFSRLVNPRRPIPAGATKVNGI 112

Query: 69  TPQEARAKGENE---AAFAARI 87
           T +  +++   E     F   I
Sbjct: 113 TDEMVQSEPGLEFILPEFLDFI 134


>UniRef50_C7RGM9 DNA polymerase III, alpha subunit n=5 Tax=Anaerococcus
           RepID=C7RGM9_ANAPD
          Length = 1365

 Score = 54.5 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKP-ADDYLPQPG 61
              ++ +F+  D ET G     DR  +  A R +      G+    Y +    + +    
Sbjct: 342 KNIEEESFVVFDLETTGLSRYKDRITEIGACRVEG-----GKITEIYNELVNPEMVIPEK 396

Query: 62  AVLITGITPQEARAKGENE 80
            + ITGIT +  +     E
Sbjct: 397 IIEITGITNEMVKDCPTIE 415


>UniRef50_B6ISI0 Exonuclease, putative n=1 Tax=Rhodospirillum centenum SW
           RepID=B6ISI0_RHOCS
          Length = 699

 Score = 54.5 bits (130), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 9   TFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
           +++  D ET G +P+  D     A +R  +   + GE                 +  I G
Sbjct: 505 SYVVFDTETTGLNPSQGDEMVALAGVRIVNGRILTGETFQTLI--NPGRAIPAASAAIHG 562

Query: 68  ITPQEARAKGENEA 81
           IT          EA
Sbjct: 563 ITDAMVAEAPRAEA 576


>UniRef50_C4XFQ7 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18
           RepID=C4XFQ7_MYCFE
          Length = 1467

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           K   ++  D ET G  P      ++ ++   S     G    F+ K  +   P    +  
Sbjct: 428 KGQEYVSFDIETTGLCPRFAVIIEYGSLPIHSNM-KYGRKTQFFIKCQEPIKPFTENL-- 484

Query: 66  TGITPQEARAKGENEAAFAARIHS 89
           TGIT       G        +I++
Sbjct: 485 TGITNAMIEKSGLELKEALQKIYN 508


>UniRef50_C9YB77 Putative uncharacterized protein n=1 Tax=Curvibacter putative
           symbiont of Hydra magnipapillata RepID=C9YB77_9BURK
          Length = 307

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSE---FNVIGEPEVFYCKPADDYLPQPGAVL 64
            T L  D ET G   A ++  + A +R D +      +G  +V+           P  V 
Sbjct: 37  KTILVLDTETTGLDQAKEKIIELALLRVDIDTATGLPVGPVQVYDGLEDPGKAIPPEVVA 96

Query: 65  ITGITPQEARAKGENEAAFA 84
           ITGI   + + +  +EA  A
Sbjct: 97  ITGIQDADVQGQALDEARVA 116


>UniRef50_C1XKD8 DNA polymerase III, alpha subunit (Gram-positive type) n=2
           Tax=Meiothermus RepID=C1XKD8_MEIRU
          Length = 261

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 5/68 (7%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
              +  D ET G  P      + A IR ++     G   VF        L  P    +TG
Sbjct: 81  EAVVVLDIETTGLSPTDHEIIELALIRLEN-----GRRTVFERLVNPGVLIPPFISRLTG 135

Query: 68  ITPQEARA 75
           I  Q+ R 
Sbjct: 136 IRSQDVRD 143


>UniRef50_D1VSB7 DNA polymerase III, alpha subunit, Gram-positive type n=1
           Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSB7_9FIRM
          Length = 1415

 Score = 54.5 bits (130), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 4/82 (4%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
            +     T++  D ET G  P  D+  +  A++      +I E            L    
Sbjct: 393 NENKSYNTYVVFDIETTGLSPIRDKITEIGAVKIVD--GIITERFSQLI--NPQMLIPEK 448

Query: 62  AVLITGITPQEARAKGENEAAF 83
              +T IT      +   E   
Sbjct: 449 VQELTRITNALVENEPTIEEVA 470


>UniRef50_B3T077 Putative exonuclease n=1 Tax=uncultured marine microorganism
           HF4000_001N02 RepID=B3T077_9ZZZZ
          Length = 299

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 13  HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
            D ET G     DR  Q+A I +D +    G                  A  I GI+ ++
Sbjct: 42  FDLETTGLDARKDRIVQYALIGSDVD----GSHINLASLVDPRRGIPTAASRIHGISEED 97

Query: 73  ARAKGENE 80
            R  G  E
Sbjct: 98  VRGVGSFE 105


>UniRef50_Q1NJL0 DNA polymerase III, epsilon subunit n=1 Tax=delta proteobacterium
           MLMS-1 RepID=Q1NJL0_9DELT
          Length = 238

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
              F+  D E  G     D      A+R ++   ++G+      KP+   LP+  + LI 
Sbjct: 37  DYDFVVFDTELTGLDRRRDEIVSIGAVRINNLRIMVGDTFYVQVKPS-QALPK-DSTLIH 94

Query: 67  GITPQEARA 75
            +TP +   
Sbjct: 95  RLTPHQLSD 103


>UniRef50_B0P1Y1 Putative uncharacterized protein n=2 Tax=Clostridiales
          RepID=B0P1Y1_9CLOT
          Length = 235

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
            ++  D ET G  P  D+  +  A++   +  + G+   + C    +       + +TG
Sbjct: 2  KDYVAFDLETTGLSPDSDQIIEIGAVKI-RDGKISGK---YNCIIHPEIEVSDFIINLTG 57

Query: 68 ITPQEARAKGENEAAFAARI 87
          I+      KG          
Sbjct: 58 ISRDML-RKGIPLKEGVEEF 76


>UniRef50_C3RQT5 DNA polymerase III subunit epsilon n=1 Tax=Mollicutes bacterium D7
           RepID=C3RQT5_9MOLU
          Length = 224

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP---QPGAVL 64
             ++  D ET G +   DR  +  AI+      V+       C P     P         
Sbjct: 39  QEYVVFDLETTGFNKKEDRIIEIGAIKV-KNGRVVDR-FSTLCAPIKGGKPMYISAKITE 96

Query: 65  ITGITPQEARAKGENEAAFAA 85
           +TGI   +   +   E+    
Sbjct: 97  VTGIKNVDLLNQ-IPESEAVK 116


>UniRef50_C4PPS2 DNA polymerase III, epsilon chain n=10 Tax=Chlamydiales
          RepID=C4PPS2_CHLTJ
          Length = 250

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 4/71 (5%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
          K   F+  D ET G     DR  +FAAIR    F+ I +   F   P  +      +  I
Sbjct: 5  KDVEFVCLDCETTGLDVKKDRVIEFAAIRF--TFDEIIDSVEFLIHP--ERAVSAESQKI 60

Query: 66 TGITPQEARAK 76
            I+    R K
Sbjct: 61 HKISDAMLRDK 71


>UniRef50_Q4UVB0 Oligoribonuclease n=29 Tax=Bacteria RepID=ORN_XANC8
          Length = 194

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 6/82 (7%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT--- 66
           ++ D E  G     D   + A I TD++ NV+ E        + + L            
Sbjct: 11 LIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEAMDEWNRNQHR 70

Query: 67 --GITPQEARAKGENEAAFAAR 86
            G+  Q         A   A+
Sbjct: 71 RSGLW-QRVLDSQVTHAQAEAQ 91


>UniRef50_Q81AF9 DNA polymerase III alpha subunit n=76 Tax=Bacillus
          RepID=Q81AF9_BACCR
          Length = 315

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M +      ++  D+ET G +P  D+  Q AA++  +        + F      +     
Sbjct: 1  MGNVSLPLDYVVIDFETTGFNPYNDKIIQVAAVKYRNH----ELVDQFVSYVNPERPIPD 56

Query: 61 GAVLITGITPQEARAKGENEAA---FAARIHS 89
              +TGIT          E     F A +H+
Sbjct: 57 RITSLTGITNYRVSDAPTIEEVLPLFLAFLHT 88


>UniRef50_A1K872 DNA polymerase III epsilon chain-like protein n=3
           Tax=Betaproteobacteria RepID=A1K872_AZOSB
          Length = 734

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 3/77 (3%)

Query: 6   KQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
            + T+   D ET G +P+  D   Q  A+R  +   +  E       P         +  
Sbjct: 540 TELTYTVFDTETTGLNPSQGDEIIQIGAVRVLNGKPLRSEAFEQLIDPC--RPLPEESAR 597

Query: 65  ITGITPQEARAKGENEA 81
           + GIT      +   EA
Sbjct: 598 VHGITADMLAGQPVIEA 614


>UniRef50_UPI00015B53D6 PREDICTED: similar to ENSANGP00000010833 n=1 Tax=Nasonia
          vitripennis RepID=UPI00015B53D6
          Length = 185

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 1  MTDTDKQPT--FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDY 56
          M  +  Q     ++ D E  G +   D+  + A+I TD + N++ +        ++D 
Sbjct: 1  MASSAVQKADRIIWIDLEMTGLNVMQDKILEVASIITDDQLNIVSDEFQMVIHQSEDV 58


>UniRef50_Q2NJG3 DNA polymerase III alpha subunit n=3 Tax=Candidatus Phytoplasma
           RepID=Q2NJG3_AYWBP
          Length = 1572

 Score = 54.1 bits (129), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 4/68 (5%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           K+ T++  D ET G     D+  + A I+     N IGE   F                I
Sbjct: 477 KEATYVVFDLETTGLSNVRDKIIEIAGIKI-KNGNKIGE---FQKFIDPQQKLTKTITNI 532

Query: 66  TGITPQEA 73
           T IT +  
Sbjct: 533 TNITDEML 540


>UniRef50_B2Q2X9 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC
           25827 RepID=B2Q2X9_PROST
          Length = 234

 Score = 54.1 bits (129), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           K    L  D ET G  P  DR      +       ++   + +Y    D+   +    +I
Sbjct: 48  KTQQILSIDLETTGLDPEKDRILSIGMVTIADSKILLKSAQHYYV--NDNEPVKAETAVI 105

Query: 66  TGITPQEARAKGENEAAFAARI 87
             ITP++    G +     A  
Sbjct: 106 NHITPEQLSD-GVSLPHAIASF 126


>UniRef50_D1NUV9 Oligoribonuclease n=3 Tax=Bifidobacterium RepID=D1NUV9_9BIFI
          Length = 219

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          +T + +Q   ++ D E  G     D   + + + TD E NV+ E   F  KP+ D +   
Sbjct: 8  LTYSAQQSRLIWIDCEMTGLDIFHDELCEVSVVPTDFELNVLDEGIDFVIKPSKDAVDHM 67


>UniRef50_C5B532 DNA polymerase III epsilon subunit n=1 Tax=Methylobacterium
          extorquens AM1 RepID=C5B532_METEA
          Length = 248

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 4/79 (5%)

Query: 7  QPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              +  D ET GT P   DR  +   +   + F        F+     +      A  I
Sbjct: 4  SQRIVVGDTETTGTDPKGGDRIIEVGFVEIVNGFR---TGRHFHSYVNPERPVPADATAI 60

Query: 66 TGITPQEARAKGENEAAFA 84
           GIT +  +      A  A
Sbjct: 61 HGITDEMLKDAPVFAAVAA 79


>UniRef50_Q6A786 Oligoribonuclease n=38 Tax=cellular organisms RepID=ORN_PROAC
          Length = 202

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL----- 64
           ++ D E  G   A D   + AA+ TD + NV GE      KP   +L      +     
Sbjct: 2  LVWIDCEMTGLDLAHDGLIEVAALVTDGQLNVQGEGVDVIIKPEPQWLDHMNDFVRNMHT 61

Query: 65 ITGITPQEARAKGENEAAFAARI 87
           +G+  +    KG   A    ++
Sbjct: 62 TSGLLAE--LDKGLTMAQAQDQV 82


>UniRef50_Q0RPW6 Oligoribonuclease n=9 Tax=Actinomycetales RepID=Q0RPW6_FRAAA
          Length = 256

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
           ++ D E  G   A D   + A + TDSE N++ E         D+ L
Sbjct: 18 LVWIDCEMTGLDAASDLLLEVACLVTDSELNILDEGIDLVISAPDEAL 65


>UniRef50_A4U4S6 DNA polymerase III epsilon chain-like protein n=1
           Tax=Magnetospirillum gryphiswaldense RepID=A4U4S6_9PROT
          Length = 619

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 3/76 (3%)

Query: 2   TDTDKQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
            +     TF+  D ET G  P   DR  Q  A+R      + GE       P        
Sbjct: 422 NEKLSDLTFVAFDCETTGLRPDQGDRLIQVGAVRIGQGRVLSGESFERLIDP--GIPIPA 479

Query: 61  GAVLITGITPQEARAK 76
            ++   GI+    + K
Sbjct: 480 QSMAYHGISNDMVKGK 495


>UniRef50_A3X8N6 Exonuclease, DNA polymerase III, epsilon subunit family protein
           n=11 Tax=Rhodobacteraceae RepID=A3X8N6_9RHOB
          Length = 484

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 5/88 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
                Q  F   D ET G  P  D   Q  A+R  +   + GE       P         
Sbjct: 269 DQPLNQLCFAVFDTETTGLLPHKDDIVQIGAVRVLNGRLIEGEELNTLVDP--GRPIPEA 326

Query: 62  AVLITGITPQEARAKGENE-AAFAARIH 88
           +  + G++      +G  + A  AA  H
Sbjct: 327 STRVHGVSTAMV--QGAPDIAEAAAEFH 352


>UniRef50_B6JVJ0 Oligoribonuclease n=1 Tax=Schizosaccharomyces japonicus yFS275
          RepID=B6JVJ0_SCHJY
          Length = 187

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GAVLI 65
          +   ++ D E  G     D   + AAI TD + N I E         DD L Q     + 
Sbjct: 6  RSPLVWVDCEMTGLEVGKDVLMEVAAIITDGDLNPIEEKFEETIHVDDDKLRQMNDWCID 65

Query: 66 TG 67
            
Sbjct: 66 HH 67


>UniRef50_B7CAB9 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM
           3989 RepID=B7CAB9_9FIRM
          Length = 525

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 4/68 (5%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             ++  D ET G     DR  +  AI     F      E +      +      A  I  
Sbjct: 50  KRYVAFDVETTGLDSKKDRIIEVGAIL----FENGHTVETYSSLVNPEVKISKEATTINH 105

Query: 68  ITPQEARA 75
           IT    + 
Sbjct: 106 ITNGMVKK 113


>UniRef50_Q2KXB5 Putative exonuclease n=4 Tax=Bordetella RepID=Q2KXB5_BORA1
          Length = 193

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 3/80 (3%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
             F+  D ET G         +FAA+R D+E  +  E      +     +P      +TG
Sbjct: 26  SAFVVADLETTGLSAHACEILEFAAVRVDTEGQIASEYSQL-VRIN-GRVPS-FIARLTG 82

Query: 68  ITPQEARAKGENEAAFAARI 87
           I+ QE    G+         
Sbjct: 83  ISQQEVIRDGKPIDEAFRAF 102


>UniRef50_Q252U5 DNA polymerase III epsilon chain n=5 Tax=Chlamydiales
          RepID=Q252U5_CHLFF
          Length = 249

 Score = 53.7 bits (128), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
          K   F+  D E  G     DR  +FAA R   + NVI   E        D +    +  I
Sbjct: 5  KDTIFVCLDCEMTGLDVKKDRIIEFAAKRFTFD-NVIDSMETLI---NPDRVISAESQRI 60

Query: 66 TGITPQEARAKGENEAAF 83
            I+    + +      F
Sbjct: 61 HRISDAMLKDQPRISEVF 78


>UniRef50_P47277 DNA polymerase III polC-type n=2 Tax=Mycoplasma RepID=DPO3_MYCGE
          Length = 1451

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
                  TF+  D ET G H   D   +F+A R     + I   + F+ K   D      
Sbjct: 408 NTKLSDATFVIFDIETTGLHGRYDDVIEFSA-RKIKNNSEID-HQQFFLKI--DKPIPKT 463

Query: 62  AVLITGITPQEARAKGENEAAFAARIHS 89
              IT IT +     G ++     +I +
Sbjct: 464 ITEITKITDEMLE-GGIDQQQGLEKIRN 490


>UniRef50_C1C170 Oligoribonuclease, mitochondrial n=2 Tax=Caligus clemensi
           RepID=C1C170_9MAXI
          Length = 230

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 5/72 (6%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP---- 58
            +      ++ D E  G     D   + A I TDS    +           D  L     
Sbjct: 47  PSTNLRRLVWIDCEMTGLDIEKDVLMEVAVIVTDSSLREVTPGINLIIHQPDSILNAMTE 106

Query: 59  -QPGAVLITGIT 69
               +  +TG+T
Sbjct: 107 FPEESHALTGLT 118


>UniRef50_Q1QW65 DNA polymerase III, epsilon subunit n=13 Tax=Gammaproteobacteria
          RepID=Q1QW65_CHRSD
          Length = 253

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 11 LFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          +  D ET G  P    R  +  A+       + G     Y  P  D    P AV + GIT
Sbjct: 4  IVLDTETTGIDPKDGHRLIEIGAVEV-VNRRLTGNNYHQYINPERD--IDPEAVEVHGIT 60

Query: 70 PQEARAKGE 78
           +    +  
Sbjct: 61 NERVADEPV 69


>UniRef50_C4KA24 DNA polymerase III, epsilon subunit n=1 Tax=Thauera sp. MZ1T
           RepID=C4KA24_THASP
          Length = 769

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 6   KQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
            + ++   D ET G +P+  D   Q  A R  +    +   E F      +    P +  
Sbjct: 575 SELSYTVFDTETTGLNPSQGDEIIQVGATRILN--GKLLRAESFEQLVDPERPLAPESAK 632

Query: 65  ITGITPQEA 73
           I GIT +  
Sbjct: 633 IHGITSEML 641


>UniRef50_D0JBJ5 DNA polymerase III subunit epsilon n=1 Tax=Blattabacterium sp.
          (Blattella germanica) str. Bge RepID=D0JBJ5_BLASB
          Length = 256

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 4/72 (5%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
                 F D E  G +   DR  + + ++     N   +     C         P +  
Sbjct: 4  KLHRPICFFDIEATGINIGKDRIIEISILKIFPNGNQ-EDKTWLVC---PGIPIPPQSTA 59

Query: 65 ITGITPQEARAK 76
          I GI  ++   K
Sbjct: 60 IHGIKNEDVEGK 71


>UniRef50_Q2Z0D2 Rad3-related DNA helicases n=1 Tax=uncultured candidate division
          WS3 bacterium RepID=Q2Z0D2_9BACT
          Length = 965

 Score = 53.4 bits (127), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
            TF+  D ET G    +DR  +  A+R   +  V      F              V +T
Sbjct: 25 PRTFVGLDLETTGVDSRVDRIIEVGAVRV-VDGRVADT---FESFVNPGCPIPSDIVHLT 80

Query: 67 GITPQEAR 74
          GI+  +  
Sbjct: 81 GISDADVA 88


>UniRef50_C7RJN1 DNA polymerase III, epsilon subunit n=1 Tax=Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1
           RepID=C7RJN1_9PROT
          Length = 735

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 6   KQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
              T+   D ET G  PA  D   Q  A+R  +   +  E   F      +   +P  + 
Sbjct: 541 SDLTYTVFDTETTGMEPAAGDEIIQIGAVRIVNGRLLRNE--NFDQLVDPERFIRPEGIR 598

Query: 65  ITGITPQEARAKGENE 80
           I GI+    R +   E
Sbjct: 599 IHGISDDMVRGQPNIE 614


>UniRef50_C4R594 RNA exonuclease, required for U4 snRNA maturation n=5
           Tax=Saccharomycetaceae RepID=C4R594_PICPG
          Length = 213

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 1/74 (1%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-G 61
            +  Q   ++ D E  G     D   +   I TD    V+ E         +D + +   
Sbjct: 31  SSPLQQPIVWIDCEMTGLDIYNDHIVEICCIITDQNLEVVDEGYESVIHYDNDVMSKMNE 90

Query: 62  AVLITGITPQEARA 75
             +    T    + 
Sbjct: 91  WCIEHHGTSGLTKK 104


>UniRef50_A4HVE4 Mitochondrial DNA polymerase I protein B, putative n=3
           Tax=Leishmania RepID=A4HVE4_LEIIN
          Length = 1430

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           +   K    +F D ET G +P+ D   + A       F+ I     F+          P 
Sbjct: 757 SQKLKTYRIVFFDIETTGLNPSTDAIVEVAM------FDPIENST-FHTLVNPQRSITPR 809

Query: 62  AVLITGITPQEARA 75
            V I  IT    R 
Sbjct: 810 TVGIHHITNAMVRD 823


>UniRef50_C5V7D5 Exonuclease RNase T and DNA polymerase III n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V7D5_9PROT
          Length = 303

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 11  LFHDYETFGTHPALDRPAQFAAI--RTDSEFNVIGEPEVFYCKPA-DDYLPQPGAVLITG 67
           +  D ET G + A D   +   +    D +    G     + +         P +  + G
Sbjct: 43  VVVDTETTGINSAQDAIIELGMVLFEYDPDTGEAGRVLGSFDQLEDPGMAIPPESTEVHG 102

Query: 68  ITPQEARAKGENEAAFAA 85
           IT +  + K  ++AA AA
Sbjct: 103 ITDEMVQGKRIDDAAVAA 120


>UniRef50_B9KXM0 DNA polymerase III, epsilon subunit n=2 Tax=Thermomicrobia (class)
           RepID=B9KXM0_THERP
          Length = 693

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              +F+  D ET G  PA  R  +  A+R +    V    E F              V +
Sbjct: 82  WPRSFVALDVETTGLRPARHRIIEIGAVRYEDGCCV----ERFSVLVNPHRRLPVYIVRL 137

Query: 66  TGITPQEAR 74
           TGI  ++  
Sbjct: 138 TGIRDEDLL 146


>UniRef50_C7NEP7 DNA polymerase III, alpha subunit n=5 Tax=Fusobacteriaceae
           RepID=C7NEP7_LEPBD
          Length = 1459

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
               +   ++  D ET G  P  D+  +  A++      VIGE   F      +      
Sbjct: 417 DKMIEDEIYVVFDIETTGFDPFNDKIIEIGAVKM-RGREVIGEFSEF---VNPEIPIPQK 472

Query: 62  AVLITGITPQEARA 75
              +T IT +    
Sbjct: 473 ITELTTITDEMVAN 486


>UniRef50_C2BET5 3'-5' exonuclease and CRISPR-associated Cas2 family protein n=1
           Tax=Anaerococcus lactolyticus ATCC 51172
           RepID=C2BET5_9FIRM
          Length = 295

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
               ++  D ET G  P  DR  +  AI+   E                D         I
Sbjct: 125 HTKAYIIIDLETTGLDPINDRIIEIGAIKIGKENKEYSSIIW------QDIKLSEKISNI 178

Query: 66  TGITPQEARAKGENEAAFAARI 87
           TGI+ ++   KG++E       
Sbjct: 179 TGISDEDI-KKGKDEKNAINEF 199


>UniRef50_Q5KPH7 Oligoribonuclease, putative n=3 Tax=Agaricomycotina
          RepID=Q5KPH7_CRYNE
          Length = 184

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 18/48 (37%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
           ++ D E  G     DR  + A I TD   N +     +  K   + L
Sbjct: 13 LVWVDCEMTGLDFLNDRIIEIAVIITDGRLNPVDGGISYIIKTPKEVL 60


>UniRef50_D2RB05 CRISPR-associated endoribonuclease Cas2 n=2 Tax=Gardnerella
           vaginalis RepID=D2RB05_GARVA
          Length = 359

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIR-TDSEFNVIGEPEVFYC----KPADDYLPQPG 61
              F+  D ET G +  +D+  +  A++  D +     +     C        +      
Sbjct: 175 DKNFVVIDCETTGLNSKVDKIIEIGAVKFIDGKIEEFQKLININCDSVSNFNKNNFIPNE 234

Query: 62  AVLITGITPQEARAKGE 78
            + +TGIT     + G 
Sbjct: 235 IIELTGITSNMLESYGV 251


>UniRef50_A5I1F6 Helicase, UvrD/REP/exonuclease family protein n=10 Tax=Clostridium
           RepID=A5I1F6_CLOBH
          Length = 855

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 4/85 (4%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           +T        +  D E+ G +   D   Q A I+ +++  VI     F            
Sbjct: 486 LTRGLDNENVVVFDVESTGINTTEDEIVQIAGIKINNKGEVIES---FQRFLTPKKFVG- 541

Query: 61  GAVLITGITPQEARAKGENEAAFAA 85
            + L+ G + Q  +  GEN+     
Sbjct: 542 DSYLVHGFSDQFLKENGENKKVVLK 566


>UniRef50_A1VJH5 Exonuclease, RNase T and DNA polymerase III n=8 Tax=Proteobacteria
           RepID=A1VJH5_POLNA
          Length = 220

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 11  LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
           +  D ET G +   D      A+R      +  E      +P    L    +V +  +  
Sbjct: 43  VALDCETTGLNTRTDDIIAIGAVRIRDNRIMTSERLELLVRPEKRRL-SAESVRVHRLRE 101

Query: 71  QEARAKGENEAAFAARI 87
           Q+  A+G +      ++
Sbjct: 102 QDV-AQGISADEAMMKL 117


>UniRef50_C6LDW1 Helicase, RecD/TraA family n=4 Tax=Clostridia RepID=C6LDW1_9FIRM
          Length = 1010

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          ++  D ET G     D   + +A++ ++   V GE   F           P A  + GIT
Sbjct: 25 YVVFDLETTGISSKYDEVIEISAVKVEAG-QVTGE---FSTLVNPGRKIPPAASRVNGIT 80

Query: 70 PQEAR 74
           +   
Sbjct: 81 DKMVA 85


>UniRef50_Q0AE35 DNA polymerase III, epsilon subunit n=5 Tax=Betaproteobacteria
          RepID=Q0AE35_NITEC
          Length = 234

 Score = 53.0 bits (126), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 10 FLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          ++F D ET G  PAL  R  + AA+      N       F+           GA+ + G+
Sbjct: 3  YVFLDTETTGLDPALGHRIVEIAAVEV---CNRRSTGRHFHRYLNPGRESDEGALRVHGL 59

Query: 69 TPQEARAK 76
          + +  + K
Sbjct: 60 SREFLQDK 67


>UniRef50_C7H779 DNA polymerase III, alpha subunit n=5 Tax=Clostridiales
           RepID=C7H779_9FIRM
          Length = 1417

 Score = 52.6 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 25/85 (29%), Gaps = 5/85 (5%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
           D      F   D ET G  P ++   +  A+       V+ E + F           P  
Sbjct: 390 DQPLDGEFCVFDTETTGLDPGVEYLTEIGAVIV-RNGEVVEEFDTF---VKPGKPITPKI 445

Query: 63  VLITGITPQEARAKGENEAAFAARI 87
             +TGIT +        E       
Sbjct: 446 TELTGITNEMVADAP-GEKEALEAF 469


>UniRef50_A4ASW0 DNA polymerase III, epsilon subunit n=1 Tax=Flavobacteriales
           bacterium HTCC2170 RepID=A4ASW0_9FLAO
          Length = 222

 Score = 52.6 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           ++    +  F+  D ET G     DR     AI   S    IG+    Y K     + + 
Sbjct: 25  LSQNLDEVRFIVFDTETTGLDIVNDRILSIGAISVFSGKLDIGDSLEIYLKQ---KIFKA 81

Query: 61  GAVLITGITPQEARAKGENEAAFA 84
            +V I GI  + +  K   E    
Sbjct: 82  ESVEIHGILKEGSIEK-HTEEEAI 104


>UniRef50_Q1EM31 DNA polymerase III, alpha subunit n=1 Tax=uncultured Thermotogales
           bacterium RepID=Q1EM31_9BACT
          Length = 1428

 Score = 52.6 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 4/74 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
             +     FL  D ET G +P  D   +  AI+   + + +      + KP  +      
Sbjct: 410 DSSLDDALFLVFDLETTGLNPKEDEIIEIGAIK--MKGSEVLGTYSTFVKPEKEL--SAM 465

Query: 62  AVLITGITPQEARA 75
              +TGIT      
Sbjct: 466 ITSLTGITEDMLSE 479


>UniRef50_B2A7J4 DNA polymerase III, epsilon subunit n=1 Tax=Natranaerobius
           thermophilus JW/NM-WN-LF RepID=B2A7J4_NATTJ
          Length = 864

 Score = 52.6 bits (125), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           + +  +Q   +  D ET G     D   + AA++   +  V    E              
Sbjct: 491 LVNKFEQNKLVVFDVETTGLDTTKDEIIELAALKAGKDGVVDEFHEYLRNSKPVG----- 545

Query: 61  GAVLITGITPQEARAKGEN 79
            +  + GI+ Q    +G+ 
Sbjct: 546 ESFQVHGISDQVLLEQGKP 564


>UniRef50_C0W0V1 DNA polymerase III subunit epsilon n=1 Tax=Actinomyces coleocanis
          DSM 15436 RepID=C0W0V1_9ACTO
          Length = 232

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
            L  D ET G   A DR    A+        V+ +  + +            A+ + GI
Sbjct: 7  NLLGFDLETTGVDTARDRIVT-ASYEVRCGSEVLEQVTLLF---NPGVEIPQSAIDVHGI 62

Query: 69 TPQEARAKGE 78
          T + A+A+G 
Sbjct: 63 TNERAQAEGL 72


>UniRef50_UPI0000DB7BA5 PREDICTED: similar to Probable oligoribonuclease n=1 Tax=Apis
          mellifera RepID=UPI0000DB7BA5
          Length = 212

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 1/67 (1%)

Query: 2  TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP- 60
          T+  K    ++ D E  G      +  + A + TD     + +        +D+ L    
Sbjct: 23 TNVQKNDYIVWLDMEMSGLDINTSQILEIACVITDKNLKTVSKDLNIVIHQSDEILNNMN 82

Query: 61 GAVLITG 67
             L T 
Sbjct: 83 DWCLATH 89


>UniRef50_Q89A34 Oligoribonuclease n=1 Tax=Buchnera aphidicola (Baizongia
          pistaciae) RepID=ORN_BUCBP
          Length = 160

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYL 57
             ++ D E  G +P + +  + A + TD    ++    V      +  L
Sbjct: 6  KNLIWIDLEMTGLNPNIHKIIEIATLITDKNLKILSYGPVIAIYQNNHQL 55


>UniRef50_B7GR95 Exonuclease, RNase T and DNA polymerase III n=1
          Tax=Bifidobacterium longum subsp. infantis ATCC 15697
          RepID=B7GR95_BIFLI
          Length = 185

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 17/50 (34%)

Query: 2  TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCK 51
           + DK    L+ D ET G  P  D   +   I T  +   + +       
Sbjct: 5  DNDDKPVRLLWVDTETTGLDPRKDPILEIGMIATGPDLKPVDDGFHTTVH 54


>UniRef50_B3P8E1 GG12405 n=2 Tax=Endopterygota RepID=B3P8E1_DROER
          Length = 184

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDY 56
           ++ D E  G     D+  + + I TD + NV  E   F      + 
Sbjct: 11 IVWMDLEMTGLDIEKDKILEVSCIITDKDLNVKSEATCFAINHPQEV 57


>UniRef50_C6CYA2 DNA polymerase III, epsilon subunit n=2 Tax=Bacillales
           RepID=C6CYA2_PAESJ
          Length = 244

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 8/90 (8%)

Query: 1   MTDTD-KQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP 58
           M DT  K+   +  D ET G +P+  D    F A+    +   + E   FY         
Sbjct: 50  MLDTPLKELDIVVFDLETTGFYPSNGDEIISFGAV--HMKGLELDESRQFYSLVNPKRRI 107

Query: 59  QPGAVLITGITPQEARAKGENEAAFAARIH 88
               + +TGIT +  +            +H
Sbjct: 108 PRQIIELTGITNEMVQD----APDLMQVLH 133


>UniRef50_B0B7H7 DNA polymerase III, epsilon chain n=13 Tax=Chlamydiaceae
          RepID=B0B7H7_CHLT2
          Length = 232

 Score = 52.6 bits (125), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 8/75 (10%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
          P  +F+D ET GT    DR  + AA             E F      +      A  I G
Sbjct: 2  PALIFYDTETTGTQIDKDRIVELAAYN-------GTTSESFQTLVNPEIPIPAEATKIHG 54

Query: 68 ITP-QEARAKGENEA 81
          IT  + A A    EA
Sbjct: 55 ITTAEVADAPRFPEA 69


>UniRef50_B4S7Q3 Exonuclease RNase T and DNA polymerase III n=1
          Tax=Prosthecochloris aestuarii DSM 271
          RepID=B4S7Q3_PROA2
          Length = 189

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAV 63
           ++    L+ D ET GT+PA     Q  AI  + +  V+ E     C P +     P A+
Sbjct: 1  MNQHKKVLYCDVETTGTNPAKHGIIQIGAI-IEVDGVVVEE-CNLKCAPHEGAEISPDAL 58

Query: 64 LITGITPQEARAKGENEAAFAARIH 88
           I+G    E  ++  +  A+    H
Sbjct: 59 AISGTERSELESRMTSHEAYTQFRH 83


>UniRef50_Q8B5Y0 Putative oligoribonuclease n=1 Tax=Diachasmimorpha longicaudata
          entomopoxvirus RepID=Q8B5Y0_9POXV
          Length = 206

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 14/58 (24%)

Query: 4  TDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
                  + D E  G  P  D   +     T+    +           +DD L    
Sbjct: 25 KTMANNIAWLDLEMTGLDPETDNILEIGCFITNDALEITSPIFHMIIHNSDDILKSMD 82


>UniRef50_Q1GL30 DNA polymerase III epsilon subunit n=2 Tax=Ruegeria
           RepID=Q1GL30_SILST
          Length = 479

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 2/76 (2%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
            +  F+  D ET G     D   + AA R  +   + GE    Y  P         +  I
Sbjct: 269 SELNFVVFDTETTGLSVTKDAIVELAAARVLNGRILDGEVFETYVDP--GRPIPAASTKI 326

Query: 66  TGITPQEARAKGENEA 81
            G+   +       EA
Sbjct: 327 HGVRDADVAQSPRIEA 342


>UniRef50_A4QGM5 Oligoribonuclease n=16 Tax=Corynebacterium RepID=ORN_CORGB
          Length = 219

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           ++ D E  G         + AA+ TD+  NV+GE         ++ L Q    +     
Sbjct: 19 LVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVHATEEELAQMDDFVTN--- 75

Query: 70 PQEARAKGENE 80
               + G  E
Sbjct: 76 --MHESSGLTE 84


>UniRef50_C5CGL7 DNA polymerase III, alpha subunit n=2 Tax=Thermotogaceae
           RepID=C5CGL7_KOSOT
          Length = 1430

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 4/70 (5%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
               ++  D ET G  P+ D   +  A++      VIGE   F      +         I
Sbjct: 415 MNSIYVVFDLETTGLDPSADEIIEIGAVKL-KGTEVIGE---FSSFVKPERNLSEKVTRI 470

Query: 66  TGITPQEARA 75
           TGI+ +E   
Sbjct: 471 TGISDRELED 480


>UniRef50_D0WFC5 DNA polymerase III, alpha chain n=1 Tax=Slackia exigua ATCC 700122
           RepID=D0WFC5_9ACTN
          Length = 291

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
              ++  D ET G +P  D   + AAIR         E + F C              +T
Sbjct: 125 PSEYVVVDIETTGLNPNKDEIIELAAIRVRGGR----ETDAFQCLVRCGGELSDAIAKLT 180

Query: 67  GITPQEARAKGE 78
           G++     A+G 
Sbjct: 181 GLSHSRLMAEGL 192


>UniRef50_C1YH96 DNA polymerase III epsilon subunit-like 3'-5' exonuclease n=2
          Tax=Actinomycetales RepID=C1YH96_NOCDA
          Length = 233

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 20/75 (26%), Gaps = 3/75 (4%)

Query: 13 HDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQE 72
           D E+ G   A DR    A  R D                         A  I  IT + 
Sbjct: 11 FDTESTGLDLANDRIVTAALWRIDPAARTKEVTTWLI---DPGIDIPQEATDIHHITTEH 67

Query: 73 ARAKGENEAAFAARI 87
          AR  G   A     I
Sbjct: 68 AREHGRPAAEAVPEI 82


>UniRef50_C0GM30 DNA polymerase III, epsilon subunit n=1 Tax=Desulfonatronospira
           thiodismutans ASO3-1 RepID=C0GM30_9DELT
          Length = 249

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
            +  F+  D E  G +   D      A+R       + +   F   P  D      +++I
Sbjct: 48  NEYDFVVLDTELTGLNVKKDEIVTIGALRISEMRIDMEQSFYFCACPTRDVPK--QSIVI 105

Query: 66  TGITPQEA-RAKGENEA 81
            GITP EA +A    EA
Sbjct: 106 HGITPSEAQKAPPLKEA 122


>UniRef50_A5KMD9 Putative uncharacterized protein n=5 Tax=Clostridiales
           RepID=A5KMD9_9FIRM
          Length = 279

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 8   PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
            +++  D ET G  P  +   +  A++       + E  + + KP +  L  P    +TG
Sbjct: 37  KSYIAFDLETTGLDPMNNEIIEIGALKVRD--GKVSERFMEFIKPQE--LISPAITGLTG 92

Query: 68  ITPQEARA 75
           I+     +
Sbjct: 93  ISNDMVAS 100


>UniRef50_A8UVH7 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp.
           128-5-R1-1 RepID=A8UVH7_9AQUI
          Length = 215

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIR-TDSEFNVIGEPEVFYCKPADDYLPQ 59
           +    ++ TF+  D ET G            A+R  +  FN + E    + KP +     
Sbjct: 31  LKQKVEETTFVVFDTETTGLDLRRAELVSIGALRVVNYSFN-LSESFHRFVKPKELTRVS 89

Query: 60  PGAVLITGITPQEARAKGENE 80
              V I GITP E   K E+ 
Sbjct: 90  ---VEIHGITPHELEKKAESH 107


>UniRef50_D1R5I0 Putative uncharacterized protein n=1 Tax=Parachlamydia
          acanthamoebae str. Hall's coccus RepID=D1R5I0_9CHLA
          Length = 231

 Score = 52.2 bits (124), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 20/65 (30%), Gaps = 7/65 (10%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          L++D ET G     D   + A        + +G    F           P A  I  IT 
Sbjct: 4  LYYDTETTGIKADRDYVIELAVY------DPVGNRT-FERLINPGVPIPPEATAIHHITD 56

Query: 71 QEARA 75
          +    
Sbjct: 57 EMVAN 61


>UniRef50_A3UR50 DNA polymerase III, epsilon chain n=6 Tax=Vibrionales
           RepID=A3UR50_VIBSP
          Length = 238

 Score = 52.2 bits (124), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 3/84 (3%)

Query: 1   MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
           MTD  K   ++  D ET G     D       +        +   +  Y    +D     
Sbjct: 42  MTDLAKDSDYIVLDLETTGLDSEQDLILSMGWVDVVKGRIDLASAKHIY--LDNDSQINA 99

Query: 61  GAVLITGITPQEARAKGENEAAFA 84
              +I  ITPQ    +G +     
Sbjct: 100 ETAVINHITPQMLE-EGASIHDAM 122


>UniRef50_UPI00005A0A92 PREDICTED: similar to small fragment nuclease (predicted) n=1
           Tax=Canis lupus familiaris RepID=UPI00005A0A92
          Length = 161

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 15  YETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP-GAVLITG 67
            +  G     D+  + A + TDS+ N++ E      K  D+ L           
Sbjct: 71  LQMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHH 124


>UniRef50_Q2SSE0 DNA polymerase III, alpha subunit, Gram-positive type n=4
           Tax=Mollicutes RepID=Q2SSE0_MYCCT
          Length = 1479

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 27/82 (32%), Gaps = 3/82 (3%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
               K    +F D ET G  P LD   +F AI  +      GE +            +  
Sbjct: 424 NQNLKDAKMVFFDLETTGLSPELDEIIEFGAIEYNF---KTGERKKIDILIKPKSKLKDF 480

Query: 62  AVLITGITPQEARAKGENEAAF 83
              +T I  +    K   E AF
Sbjct: 481 TKKLTNINEEMLENKPGIEVAF 502


>UniRef50_A8RD59 Putative uncharacterized protein n=2 Tax=unclassified
           Erysipelotrichaceae RepID=A8RD59_9FIRM
          Length = 1447

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           T+   D ET G     D   +F             +    + KP          V +TGI
Sbjct: 398 TYCVFDLETTGLSSRFDHIIEFGGQIVKD--RTCIKSLQLFIKPP--VPIPAHIVELTGI 453

Query: 69  TPQEARA 75
           + +  R 
Sbjct: 454 SEEHVRN 460


>UniRef50_B3R0M5 DNA polymerase III alpha subunit n=1 Tax=Candidatus Phytoplasma
           mali AT RepID=B3R0M5_PHYMT
          Length = 1449

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           T++  D+ET G     D+  + AAI+  +   +I E   F           P    +T I
Sbjct: 408 TYVIFDFETTGLSKINDQIIEIAAIKIQNN-QIIDE---FQTLINPQQELTPFIENLTNI 463

Query: 69  TPQEARAKGE 78
           + Q+ + +  
Sbjct: 464 SNQDLKNQPL 473


>UniRef50_Q6MGT7 DNA polymerase III alpha subunit n=1 Tax=Bdellovibrio
          bacteriovorus RepID=Q6MGT7_BDEBA
          Length = 217

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLP-QPGAVLITGI 68
          F+  D ET GT P +D+  +  A+R        G+PE  +    D   P  PGA  + GI
Sbjct: 15 FIAFDLETTGTVPGVDQIVEIGAVRFID-----GQPEAIFATLIDPLRPIPPGASAVNGI 69

Query: 69 TPQEARAKGE 78
          +    + K  
Sbjct: 70 SDDMVKGKPL 79


>UniRef50_Q11G58 DNA polymerase III, epsilon subunit n=1 Tax=Chelativorans sp.
          BNC1 RepID=Q11G58_MESSB
          Length = 498

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 19/65 (29%), Gaps = 2/65 (3%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          +  D ET G      R  Q A +          E   F           P ++ I GIT 
Sbjct: 16 VAFDTETTGLDTRTARVVQVAGVAISRGAVRQDES--FESLVHPGMSIPPDSIRIHGITD 73

Query: 71 QEARA 75
             R 
Sbjct: 74 GMLRE 78


>UniRef50_A5Z7T3 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
          ATCC 27560 RepID=A5Z7T3_9FIRM
          Length = 237

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 4/80 (5%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
            ++  D ET G     D+  +  A++   +   +                 P    +TG
Sbjct: 3  KDYVCVDIETSGIRVKWDKIIEIGAVKV-RDGKAVDTFSELI---NPGLKLSPYITELTG 58

Query: 68 ITPQEARAKGENEAAFAARI 87
          IT +  + K   E      I
Sbjct: 59 ITDEMLKDKPFIEEVLPRFI 78


>UniRef50_Q67P96 DNA polymerase III alpha subunit n=2 Tax=Firmicutes
           RepID=Q67P96_SYMTH
          Length = 1475

 Score = 51.8 bits (123), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 7/79 (8%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           F+  D ET G  P  D   +  A+R      ++     F           P    +T IT
Sbjct: 454 FVVLDIETTGFSPIGDDIIELGAVRC-RGGEIVDS---FQSFVRPTKPVPPEVQKLTNIT 509

Query: 70  PQEARAKGENE-AAFAARI 87
           P     +G  E A      
Sbjct: 510 PDML--EGAPEAAEALRAF 526


>UniRef50_C6XW17 Exonuclease RNase T and DNA polymerase III n=74 Tax=cellular
          organisms RepID=C6XW17_PEDHD
          Length = 328

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
          + +    F D ET G +   DR  + A ++   + + + +      +   +      A L
Sbjct: 4  NLKRPLAFFDLETTGVNVGADRIVEIAILKAMPDGSELIKT----MRINPEMPIPLYASL 59

Query: 65 ITGITPQEARAKGE 78
          I GI  +    +  
Sbjct: 60 IHGIYDEHIANEPI 73


>UniRef50_D0WQJ6 Exonuclease, DNA polymerase III, epsilon subunit family n=1
          Tax=Actinomyces sp. oral taxon 848 str. F0332
          RepID=D0WQJ6_9ACTO
          Length = 206

 Score = 51.8 bits (123), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 5/66 (7%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          +   D ET G  P  DR  +   +  D      GE +          L   GAV + G+T
Sbjct: 3  YAVVDVETTGLSPVRDRIVEIGVVLLDESGEPEGEWQSL---VNP--LRGMGAVFVHGLT 57

Query: 70 PQEARA 75
            +   
Sbjct: 58 DADVAD 63


>UniRef50_Q0FXM2 Exonuclease, DNA polymerase III, epsilon subunit family protein n=1
           Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXM2_9RHIZ
          Length = 466

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 24/78 (30%), Gaps = 3/78 (3%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +   D ET G  P  D   Q  AIR       + E E F             +  I GIT
Sbjct: 274 YCVFDTETTGLIPHRDEIVQIGAIRIVD--GKLVEGETFDTLVDPGGPIPRASSKIHGIT 331

Query: 70  PQEARAKGENEAAFAARI 87
            +    +    A    R 
Sbjct: 332 DKMVMGQPR-IAEAGRRF 348


>UniRef50_B4S8Q4 DNA-directed DNA polymerase n=2 Tax=Chlorobiaceae
          RepID=B4S8Q4_PROA2
          Length = 180

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 8/82 (9%)

Query: 10 FLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
           +  D ET G  P   DR  + AA+   +   VI E   F C    +         I GI
Sbjct: 13 VIAVDVETTGLSPRRGDRVIEVAAVAIVN--GVIEE--HFCCLINVNAPIPTVVQKIHGI 68

Query: 69 TPQEARAKGENEA---AFAARI 87
          TP+    +   EA    F   I
Sbjct: 69 TPELLAGEKPPEAVWPEFLKFI 90


>UniRef50_C4Y8A3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae
          ATCC 42720 RepID=C4Y8A3_CLAL4
          Length = 283

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEP 45
           T      ++ D E  G   A D   +   I TD   N+I E 
Sbjct: 28 STALYKPLVWIDCEMTGLDIAKDHIIEICCIITDGNLNIIDEK 70


>UniRef50_C1CX37 Putative DNA-directed DNA polymerase (DNA polymerase III, epsilon
          subunit) n=1 Tax=Deinococcus deserti VCD115
          RepID=C1CX37_DEIDV
          Length = 202

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 4/76 (5%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDY----LPQPGAVL 64
            +  D ET G  P  D   +  A+R  +             +P +      +    A  
Sbjct: 2  NVVVFDLETTGLSPERDGIVEIGALRVVNGQVHEHLRYETLVRPTNAAGERLMIPWHAQR 61

Query: 65 ITGITPQEARAKGENE 80
          + GI+ +  R+    E
Sbjct: 62 VHGISNEMVRSAPTIE 77


>UniRef50_C2BJB2 DNA polymerase III subunit epsilon n=1 Tax=Corynebacterium
           pseudogenitalium ATCC 33035 RepID=C2BJB2_9CORY
          Length = 232

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
           +P F   D ET G +   DR  + A  R D  F ++ +       P    +       I 
Sbjct: 31  RPVFAVIDTETTGFNKRYDRIIELAVARFDESFRLVDQ-WHTLINPDGKQIKNSH---IH 86

Query: 67  GITPQEAR-AKGENE--AAFAARI 87
           GIT  +   A    E    FAAR+
Sbjct: 87  GITNADVAHAPTFPEVYTEFAARV 110


>UniRef50_A8ES54 DNA polymerase III, epsilon subunit n=4 Tax=Epsilonproteobacteria
          RepID=A8ES54_ARCB4
          Length = 203

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 3  DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
          +T  Q  ++  D ET G +P  D      A+       ++ +    + KP+ D      +
Sbjct: 24 ETPPQNEYVSLDCETTGLNPKKDEILSIGAVLIKDNKILMRKTFNIFLKPSKDINI--ES 81

Query: 63 VLITGITPQEARAKGENE 80
          + +  +   +     E E
Sbjct: 82 IKVHHLRQIDLNDALEPE 99


>UniRef50_B8GE83 Exonuclease RNase T and DNA polymerase III n=1
          Tax=Methanosphaerula palustris E1-9c RepID=B8GE83_METPE
          Length = 193

 Score = 51.4 bits (122), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 12/88 (13%)

Query: 10 FLFHDYETFGTHPALD----------RPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ 59
          +LF D ET G                R  +   + TD++  VI E  +      D +   
Sbjct: 2  YLFFDTETTGLPKKKHASMHRVANWPRIVELGWVLTDTKGTVIEEAGLLVR--PDGFSVP 59

Query: 60 PGAVLITGITPQEARAKGENEAAFAARI 87
            +  I GIT ++A  +G   +   AR 
Sbjct: 60 AESTAIHGITTEQATEQGSAISEVLARF 87


>UniRef50_A0PU74 Oligoribonuclease n=72 Tax=Bacteria RepID=ORN_MYCUA
          Length = 215

 Score = 51.4 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 5/75 (6%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           +   ++ D E  G     D+  + AA+ TD++ N++G+         D  L     V+ 
Sbjct: 1  MREELVWIDCEMTGLDLGPDKLIEIAALVTDADLNILGDGVDVVIHADDAALSSMVDVVA 60

Query: 66 TGITPQEARAKGENE 80
                     G  E
Sbjct: 61 -----DMHSRSGLTE 70


>UniRef50_A5F9M6 DNA polymerase III, epsilon subunit related exonuclease n=2
           Tax=Clostridium kluyveri RepID=A5F9M6_CLOK5
          Length = 441

 Score = 51.4 bits (122), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 9   TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
            F+  D ET G  P  D   + AA + ++   +I            +    P    I  I
Sbjct: 130 NFVVVDLETTGLEPTRDYIIEIAAAKYENN-EIIDTYTTL---VNPEVFIPPNITNINHI 185

Query: 69  TPQEARA 75
                + 
Sbjct: 186 DNDMVKD 192


>UniRef50_A3V111 Exonuclease, DNA polymerase III, epsilon subunit family n=1
           Tax=Loktanella vestfoldensis SKA53 RepID=A3V111_9RHOB
          Length = 469

 Score = 51.4 bits (122), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 2/69 (2%)

Query: 7   QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLIT 66
             T++  D ET G  P  D   Q  A+R  +     GE                 +  + 
Sbjct: 273 DLTYVVFDTETTGFLPNKDEVVQIGALRVVNGQQAPGEVLDLLV--NPGRAIPASSTAVH 330

Query: 67  GITPQEARA 75
            IT    + 
Sbjct: 331 RITDAMVKD 339


>UniRef50_C6V4W1 DNA polymerase III, epsilon subunit n=2 Tax=Neorickettsia
          RepID=C6V4W1_NEORI
          Length = 228

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 11 LFHDYETFGTH-PALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          +  D ET G      DR  +   +    +F + GE    Y     +      A  + GIT
Sbjct: 7  VILDTETTGLDMKNGDRVIEIGCVEM-VDFRITGEIFHIY--LNPEREISKEATRVHGIT 63

Query: 70 PQEARA 75
           ++   
Sbjct: 64 FEQLAD 69


>UniRef50_B4SAW0 Exonuclease RNase T and DNA polymerase III n=2
          Tax=Chlorobium/Pelodictyon group RepID=B4SAW0_PELPB
          Length = 190

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 10 FLFHDYETFGT-----HPALD-----RPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQ 59
          +LF D ET G       P  D     R  Q A +  D+E N +   +       + ++  
Sbjct: 2  YLFFDTETTGLPRNWRAPVTDVDNWPRLVQLAYLSFDAEGNQLFSGDAII--KPEGFVIP 59

Query: 60 PGAVLITGITPQEARAKGENEAAFAARIH 88
            AV I GI+ Q A  +G+         +
Sbjct: 60 SSAVQIHGISTQRALLEGKPLGQVLQSFY 88


>UniRef50_C0DA77 Putative uncharacterized protein n=4 Tax=Clostridiales
          RepID=C0DA77_9CLOT
          Length = 255

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
          +++  D ET G  P LD+  + AA+R   +  V G    F              V +TGI
Sbjct: 15 SYVAIDIETTGLEPRLDKITEIAALRV-VDGAVEGR---FVTLVNPGRPLGERIVELTGI 70

Query: 69 TPQEAR 74
          T     
Sbjct: 71 TDGMLA 76


>UniRef50_C8WWI2 DNA polymerase III, alpha subunit n=2 Tax=Alicyclobacillus
           acidocaldarius RepID=C8WWI2_ALIAD
          Length = 1440

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           ++  D ET G +   D   + AA++      ++            +    P  V +TGIT
Sbjct: 427 YVVFDTETTGLNAREDTLIEIAAVKV-KAGQIVDTYATLI---DPERSLDPKIVELTGIT 482

Query: 70  PQEAR 74
            +   
Sbjct: 483 NEMVA 487


>UniRef50_Q1QDN3 Exonuclease n=3 Tax=Psychrobacter RepID=Q1QDN3_PSYCK
          Length = 203

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 1  MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP 60
          M        ++  D E  G +P        AAI  + +    G      C+P    +P+ 
Sbjct: 26 MFTAPVDEQWVAIDCEMTGLNPKKHHLLSVAAIHINGDKIDTGNGLHLLCRPP--VMPEG 83

Query: 61 GAVLITGITPQEAR 74
            ++I G+   +  
Sbjct: 84 DTIVIHGLRTADVE 97


>UniRef50_B8CW68 DNA polymerase III, alpha subunit n=1 Tax=Halothermothrix orenii H
           168 RepID=B8CW68_HALOH
          Length = 1397

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
             + +  TF+  D ET G +   +   +  A++      VI E   F             
Sbjct: 377 DVSLESATFVVFDLETTGLNKFKNEIIEIGAVKV-KSGKVIDE---FSSFVKPGESIPNK 432

Query: 62  AVLITGITPQEARA 75
              +TGIT +    
Sbjct: 433 ITELTGITNEMVSR 446


>UniRef50_Q68BL2 DNA helicase RecG n=2 Tax=cellular organisms RepID=Q68BL2_NANBA
          Length = 1341

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 11  LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
           +  D ET G     D P + AA     E  + G       + AD       A  +TGIT 
Sbjct: 137 IVFDLETTGLSKEKDHPVEIAA-----EAPLSGRTFSTLIRLADGMSISTKAEEVTGITT 191

Query: 71  QEARAKGEN 79
            + +     
Sbjct: 192 AQCKDPSLP 200


>UniRef50_C6W9X5 Exonuclease RNase T and DNA polymerase III n=1 Tax=Actinosynnema
          mirum DSM 43827 RepID=C6W9X5_ACTMD
          Length = 262

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 25/81 (30%), Gaps = 1/81 (1%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPA-DDYLPQPGAVLITGI 68
           L  D ET    P  DR    + +                   A         A  I GI
Sbjct: 15 LLALDLETTDVEPRRDRIVTASVVVITPGAEGAKPDVRVRTWLADPGVPIPASATAIHGI 74

Query: 69 TPQEARAKGENEAAFAARIHS 89
          + ++ARA+G       A + +
Sbjct: 75 STEQARAEGRPVGEVVAEVEA 95


>UniRef50_B5JFP7 Exonuclease superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235
          RepID=B5JFP7_9BACT
          Length = 193

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 2/79 (2%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           +  + + D E  G  PA DR  + A I T+ +   + E E    +P +           
Sbjct: 2  SKRRYCWIDLEMTGLDPATDRIVEAAVIITNKQLEPVFEWESAVRQPQEVLEGMNDWCKH 61

Query: 66 TGITPQEARA--KGENEAA 82
                       G  E  
Sbjct: 62 HHAESGLLDRIQDGITEEE 80


>UniRef50_B4AHF2 DNA polymerase III PolC-type (PolIII) n=1 Tax=Bacillus pumilus
          ATCC 7061 RepID=B4AHF2_BACPU
          Length = 240

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 5/87 (5%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIG----EPEVFYCKPADDYLPQPGA 62
            T++  D ET G     D+  +  AI+      V                +        
Sbjct: 3  PQTYVVLDLETTGLDHKKDQIIEIGAIKIRLGGRVREFEEVSRFHTMVALEEGRDLPEFI 62

Query: 63 VLITGITPQEARAKGENEAAFAARIHS 89
            +TGIT ++     E E      + +
Sbjct: 63 TNLTGITEEDLEDAPE-EWDALDELQN 88


>UniRef50_Q6VY79 Putative uncharacterized protein n=1 Tax=Streptomyces phage VWB
          RepID=Q6VY79_9CAUD
          Length = 263

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 5/77 (6%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          +  D ET G     DR    AAI   +      +P               GA  + GIT 
Sbjct: 8  VAFDLETTGVDVEQDRIVTAAAIDLGA-----EKPLTLEWLADPGIEIPEGATAVHGITT 62

Query: 71 QEARAKGENEAAFAARI 87
          + AR  GE       ++
Sbjct: 63 EHAREHGERAHDVVDQV 79


>UniRef50_B7A7U0 Putative PAS/PAC sensor protein n=1 Tax=Thermus aquaticus Y51MC23
           RepID=B7A7U0_THEAQ
          Length = 627

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +   D ET G  P  D      A+      + +   EV+             +  + G+T
Sbjct: 443 YTAFDLETTGLDPREDAIIALGAV--HLLGSRVLRHEVYEALVDPGRPIPKASTEVHGLT 500

Query: 70  PQEARAKGENE 80
            +  + K + E
Sbjct: 501 WEMLKDKPKLE 511


>UniRef50_O83649 DNA polymerase III subunit epsilon n=2 Tax=Treponema pallidum
          RepID=DPO3E_TREPA
          Length = 215

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
          F   D ET G     DR  +  A+  D +  +     + +     D    P    I  IT
Sbjct: 15 FTAFDTETTGLKAEEDRIIEIGAVTFDRKGIIARFSTLIF----PDRAIPPDVSKINHIT 70

Query: 70 PQEARAK 76
                K
Sbjct: 71 DDMLVNK 77


>UniRef50_Q31GK8 Exonuclease n=8 Tax=Bacteria RepID=Q31GK8_THICR
          Length = 207

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 3/85 (3%)

Query: 3   DTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGA 62
           +T      +  D ET G +P  DR    +AI+      +  E          +      +
Sbjct: 24  NTPSDDEVVCFDCETTGLNPRKDRIVSLSAIKIRGNEVLTSEALNLTFVQ--EAAISEES 81

Query: 63  VLITGITPQEARAKGENEAAFAARI 87
           + I  I  ++ +A G +E       
Sbjct: 82  IKIHWIRNEDTKA-GLSEQEGIEAF 105


>UniRef50_C4FGI7 Putative uncharacterized protein n=1 Tax=Bifidobacterium
          angulatum DSM 20098 RepID=C4FGI7_9BIFI
          Length = 186

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKP-ADDYLPQPGAVLITGI 68
          ++  D ET G  PA DR  +  A+R +      G     Y K              +TGI
Sbjct: 19 YVVVDLETTGISPARDRIIEIGAVRVEH-----GTVTAEYSKLVNPGRPVGGFITGLTGI 73

Query: 69 TPQEARAKGENEA 81
          + +        EA
Sbjct: 74 SDEMVGNASPIEA 86


>UniRef50_A2TRJ1 DNA polymerase III, epsilon subunit n=1 Tax=Dokdonia donghaensis
           MED134 RepID=A2TRJ1_9FLAO
          Length = 229

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 4/85 (4%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           +   +   F+  D ET G     DR      +       ++ +    + K        P 
Sbjct: 38  SKGLQNTRFVVFDTETTGLDYKKDRILSLGGVAVVGNQVIVADTLELFLKQD---FYNPD 94

Query: 62  AVLITGITPQEARAKGENEAAFAAR 86
           +  I GI  Q    K  NE    A+
Sbjct: 95  SAQIHGILKQGNYLK-VNEKEAIAQ 118


>UniRef50_D1BUD4 DNA polymerase III, epsilon subunit n=1 Tax=Xylanimonas
           cellulosilytica DSM 15894 RepID=D1BUD4_XYLCX
          Length = 547

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 2   TDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPG 61
           T       F   D ET G  P  DR  + A +R D+    + E      +         G
Sbjct: 41  TPPPFGAGFAVVDVETTGLSPRYDRVIEVAILRLDTNGRTVDEWST---RLNPQRTV--G 95

Query: 62  AVLITGITPQEAR 74
           A  I GIT  +  
Sbjct: 96  ATWIHGITDADVA 108


>UniRef50_C0QPN1 DNA polymerase III subunit epsilon n=1 Tax=Persephonella marina
          EX-H1 RepID=C0QPN1_PERMH
          Length = 206

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           + TF   D ET G     D      A++       I     FY     + +P+   +LI
Sbjct: 31 NKITFCSFDLETTGLDVEKDEIISIGAVKIKE--MKIDLSTSFYRIVKPERIPEKENILI 88

Query: 66 TGITPQEARA 75
            IT  E + 
Sbjct: 89 HSITASEMKK 98


>UniRef50_B1Y7R5 DNA polymerase III, epsilon subunit n=6 Tax=Proteobacteria
           RepID=B1Y7R5_LEPCP
          Length = 731

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 3/69 (4%)

Query: 7   QPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
              +   D ET G +P+  D   Q  A R       +   E F           P  + I
Sbjct: 538 DLAYTVFDTETTGLNPSDGDEIIQIGATRI--SGGKLRRQESFEQLVDPQRPIPPAGIPI 595

Query: 66  TGITPQEAR 74
            GI P    
Sbjct: 596 HGIKPDMVA 604


>UniRef50_C8WX41 Exonuclease RNase T and DNA polymerase III n=3 Tax=Bacteria
          RepID=C8WX41_ALIAD
          Length = 952

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 5/77 (6%)

Query: 11 LFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITP 70
          +  D ET G  P      +  A+R      ++     F+     +         +TG++ 
Sbjct: 4  IIVDLETTGLDPERAEILEIGALRV-RGGEIVDT---FHTLVRPERPIPDEITRLTGLSD 59

Query: 71 QEARAKGENEAAFAARI 87
           +      +E     R 
Sbjct: 60 ADVAGAP-SEREALMRF 75


>UniRef50_P54394 Probable ATP-dependent helicase dinG homolog n=10 Tax=Bacillus
          RepID=DING_BACSU
          Length = 931

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 6  KQPTFLFHDYETFGTHPAL-DRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
           +  F+  D ET G  P   D+  Q AA+  ++    I E    Y  P            
Sbjct: 2  NKQRFVVIDVETTGNSPKKGDKIIQIAAVVIEN--GQITERFSKYINPNKS--IPAFIEQ 57

Query: 65 ITGITPQEARAKGENEAAF 83
          +TGI+ Q    +   EA  
Sbjct: 58 LTGISNQMVENEQPFEAVA 76


>UniRef50_Q1DB51 Exonuclease n=3 Tax=Cystobacterineae RepID=Q1DB51_MYXXD
          Length = 219

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 5  DKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVL 64
              T  F D ET G   +     + A +R D+    +        KP       P A+ 
Sbjct: 26 PHLRTLCFVDLETTGLDASRHEVLEVAVLRVDARSLKVLAEYEARVKPTRLADAHPEALA 85

Query: 65 ITGITPQE 72
          + G + +E
Sbjct: 86 VCGYSDEE 93


>UniRef50_Q315G7 DNA polymerase III, epsilon subunit n=1 Tax=Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20
           RepID=Q315G7_DESDG
          Length = 239

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 10  FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           F   D E  G  P  D      A+R      + G+    Y +P         A LI  IT
Sbjct: 41  FAVTDMEMTGLDPEHDEIVAIGAVRIRGLSIITGDVFHTYVRPQRSMARP--ATLIHRIT 98

Query: 70  PQEA 73
           P + 
Sbjct: 99  PAQL 102


>UniRef50_B4VF18 DNA polymerase III subunit epsilon n=9 Tax=Streptomyces
          RepID=B4VF18_9ACTO
          Length = 246

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 23/80 (28%), Gaps = 4/80 (5%)

Query: 10 FLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGIT 69
           +  D ET GT P   R    A +       V                    A  I GI+
Sbjct: 9  LVGFDLETTGTEPGESRIVTAAVVEV-RGGEVRERRGWLA---DPGIPIPEQASAIHGIS 64

Query: 70 PQEARAKGENEAAFAARIHS 89
             A A+G      A  + +
Sbjct: 65 TARAVAEGRPVREVAQEVAA 84


>UniRef50_B9L7M7 Exonuclease n=3 Tax=cellular organisms RepID=B9L7M7_NAUPA
          Length = 293

 Score = 51.0 bits (121), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 4/70 (5%)

Query: 9  TFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGI 68
            +  D ET G +   DR  Q + +  +     I E      KP         A+ +  I
Sbjct: 2  KIVILDTETTG-NKEEDRIIQLSYLVLNENL-EIEEIHDELVKPP--LPISFEAMAVHHI 57

Query: 69 TPQEARAKGE 78
          T +    K  
Sbjct: 58 TNEMVEDKPL 67


>UniRef50_C9RIR1 DNA polymerase III, epsilon subunit n=1 Tax=Fibrobacter
          succinogenes subsp. succinogenes S85 RepID=C9RIR1_FIBSS
          Length = 215

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 4/73 (5%)

Query: 7  QPTFLFHDYETFGTHPALDRPAQFAAIRTD---SEFNVIGEPE-VFYCKPADDYLPQPGA 62
           P F+  D ET G     D   +  A++         V+ +    F      + L    A
Sbjct: 5  PPKFVAFDLETTGLVNRKDEIIEIGAVKFTVEVKNGRVVPKLISEFDTLVKPNMLIPAEA 64

Query: 63 VLITGITPQEARA 75
            +  IT +    
Sbjct: 65 TNVNHITDKMVEN 77


>UniRef50_Q83YZ1 DNA polymerase III alpha subunit n=1 Tax=Peanut witches'-broom
           phytoplasma RepID=Q83YZ1_PEWBP
          Length = 1492

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 6   KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           K   ++  D ET G     DR    AA++  +    I E       P  D         +
Sbjct: 401 KNHNYVVLDIETTGFSKTRDRIISIAAVKIQN--GKIIEYFDELINPGKDIKISNLIQRL 458

Query: 66  TGITPQEARAK 76
           T I+ +    K
Sbjct: 459 TNISDEILLNK 469


>UniRef50_Q5YSF0 Putative DNA polymerase n=1 Tax=Nocardia farcinica
          RepID=Q5YSF0_NOCFA
          Length = 229

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 24/84 (28%), Gaps = 5/84 (5%)

Query: 6  KQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLI 65
           Q      D ET    P   R    + IR D   +V     +              A  I
Sbjct: 4  TQLPLAAFDLETTSADPHSARVVTASIIRVDGG-DVRARNWIA----NPHIPIPAEATEI 58

Query: 66 TGITPQEARAKGENEAAFAARIHS 89
           G T +  +  G   A   A + +
Sbjct: 59 HGYTDEYVQKHGRPHADVIAEVTA 82


>UniRef50_Q21VB4 DNA polymerase III, epsilon subunit n=7 Tax=Betaproteobacteria
          RepID=Q21VB4_RHOFD
          Length = 476

 Score = 50.7 bits (120), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 8  PTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITG 67
          P ++  D ET G +P  DR  + AA+R       +                 P    +TG
Sbjct: 3  PCYVLLDLETTGGNPVHDRITEIAAVRI-ENGQEVARWSTL---VNPGCSISPFIQHLTG 58

Query: 68 ITPQEARAKGENEAAFAAR 86
          I+      +G       A+
Sbjct: 59 ISNAMV--RGAPGFETVAQ 75


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.316    0.152    0.433 

Lambda     K      H
   0.267   0.0465    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 630,482,832
Number of Sequences: 3077464
Number of extensions: 25758835
Number of successful extensions: 52705
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 392
Number of HSP's successfully gapped in prelim test: 513
Number of HSP's that attempted gapping in prelim test: 51879
Number of HSP's gapped (non-prelim): 914
length of query: 89
length of database: 1,040,396,356
effective HSP length: 59
effective length of query: 30
effective length of database: 858,825,980
effective search space: 25764779400
effective search space used: 25764779400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 87 (37.9 bits)
