15/01/2012 23:05:45 : INFO  : Run start: Sun Jan 15 23:05:45 GMT 2012
15/01/2012 23:05:45 : INFO  : Initialised job
15/01/2012 23:05:45 : INFO  : Renaming log file 'phyre2_20120115_230545.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/bd3fcbc4bee13106/phyre_20120115_230545.log'
15/01/2012 23:05:45 : INFO  : Initialised job:
Sequence
>batch____
MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQP
GAVLITGITPQEARAKGENEAAFAARIHS

15/01/2012 23:05:45 : INFO  : Checked sequence
15/01/2012 23:05:45 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 23:05:45 : INFO  : PSI-BLAST 3 iterations
15/01/2012 23:06:46 : INFO  : PSI-BLAST 5 iterations
15/01/2012 23:07:48 : INFO  : Finished PSI-BLAST
15/01/2012 23:07:49 : INFO  : Running Buildali to generate a3m file
15/01/2012 23:10:15 : INFO  : Converting to HMM
15/01/2012 23:10:15 : INFO  : Calibrating HMM
15/01/2012 23:10:18 : INFO  : Searching HMM database
15/01/2012 23:12:28 : INFO  : Finished buildali
15/01/2012 23:12:28 : INFO  : Predicting secondary structure
15/01/2012 23:12:28 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 23:12:28 : INFO  : Predicting Disordered regions
15/01/2012 23:12:29 : INFO  : Predicted Disorder (Disopred)
15/01/2012 23:12:29 : INFO  : Running memsat_svm check
15/01/2012 23:13:13 : INFO  : Globular protein
15/01/2012 23:13:14 : INFO  : Predicted Transmembrane (memsat_svm) ID 'bd3fcbc4bee13106'
15/01/2012 23:13:14 : INFO  : Initialising fold library search
15/01/2012 23:13:14 : INFO  : Initialised search input
15/01/2012 23:13:14 : INFO  : Building Ensemble models
15/01/2012 23:13:14 : INFO  : Building hh.d2qxfa1.model.1.pdb
15/01/2012 23:13:15 : INFO  : Building d2qxfa1.1.pdb
15/01/2012 23:13:16 : INFO  : Building d1y97a1.2.pdb
15/01/2012 23:13:17 : INFO  : Building d2f96a1.3.pdb
15/01/2012 23:13:18 : INFO  : Building c3u6fA_.4.pdb
15/01/2012 23:13:18 : INFO  : Building c3tr8A_.5.pdb
15/01/2012 23:13:19 : INFO  : Building d1j9aa_.6.pdb
15/01/2012 23:13:19 : INFO  : Building d3b6oa1.7.pdb
15/01/2012 23:13:20 : INFO  : Building c3cm6A_.8.pdb
15/01/2012 23:13:21 : INFO  : Building d1w0ha_.9.pdb
15/01/2012 23:13:21 : INFO  : Building c2xriA_.10.pdb
15/01/2012 23:13:22 : INFO  : Building c2gbzA_.11.pdb
15/01/2012 23:13:22 : INFO  : Building d2igia1.12.pdb
15/01/2012 23:13:23 : INFO  : Building c1zbhA_.13.pdb
15/01/2012 23:13:23 : INFO  : Building c1zbuB_.14.pdb
15/01/2012 23:13:23 : INFO  : Building d2guia1.15.pdb
15/01/2012 23:13:24 : INFO  : Building c2p1jB_.16.pdb
15/01/2012 23:13:24 : INFO  : Building d1wlja_.17.pdb
15/01/2012 23:13:24 : INFO  : Building c2is3B_.18.pdb
15/01/2012 23:13:25 : INFO  : Building d1uoca_.19.pdb
15/01/2012 23:13:25 : INFO  : Building d1x9ma1.20.pdb
15/01/2012 23:13:27 : INFO  : Finished HH model building
15/01/2012 23:13:27 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 23:13:29 : INFO  : html domain output complete ID 'bd3fcbc4bee13106'
15/01/2012 23:20:23 : INFO  : Run end  : Sun Jan 15 23:20:23 GMT 2012
