Phyre 2 alignment of C0Z3X9 with c3cm6A_

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Job Description | C0Z3X9
Confidence | 99.80% | Date | Thu Jan 5 10:55:44 GMT 2012
Rank | 8 | Aligned Residues | 78
% Identity | 24% | Template | c3cm6A_
PDB info | PDB header:hydrolase, apoptosis | Chain: A: PDB Molecule:cell death-related nuclease 4; | PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . |  |  |  | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |  |  | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | F | L | F | H | D | Y | E | T | F | G | T | H | P | A | L | D | . | . | . | R | P | A | Q | F | A | A | I | R | T | D | S | E | F | N | V | I | G | E | P | . | . | E | V | F | Y | C | K | P | A | D | D | Y | L | P | Q | P | G | A | V | L | I | T | G | I | T | P | Q | E | A | R | A | K | G | E | N | E | A | A | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Sequence |  | T | L | L | I | L | D | F | E | T | T | S | D | A | A | N | Q | D | Y | P | C | E | V | I | Q | F | A | I | V | A | Y | D | V | P | N | D | K | I | R | E | D | I | S | F | N | K | Y | V | K | P | V | L | N | R | T | L | T | K | N | C | V | D | F | T | G | I | P | Q | R | S | I | D | . | T | A | D | T | F | D | V | V
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | B |  | S | S |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | S |  | B |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |  | . | . | . | . | . | . | . | .
|  | 84 | . | . | .
Predicted Secondary structure |  |  |  |  |
Query SS confidence |  |  |  |  |
Query Sequence |  | A | A | R | I
Query Conservation |  |  |  |  |
Alig confidence |  |  |  |  |
Template Conservation |  |  |  |  |
Template Sequence |  | Y | E | Q | F
Template Known Secondary structure |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |
Template SS confidence |  |  |  |  |
|  | 89 | 90 | . | .

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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