Phyre 2 Results for C0Z3X9

Email | l.a.kelley@imperial.ac.uk
Description | C0Z3X9
Date | Thu Jan 5 10:55:44 GMT 2012
Unique Job ID | bd3fcbc4bee13106

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d2qxfa1 |
|  | 100.0 | 99 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
2 | d1y97a1 |
|  | 99.8 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
3 | d2f96a1 |
|  | 99.8 | 24 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
4 | c3u6fA_ |
|  | 99.8 | 22 | PDB header:hydrolase/dna Chain: A: PDB Molecule:three prime repair exonuclease 1; PDBTitle: mouse trex1 d200n mutant
5 | c3tr8A_ |
|  | 99.8 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:oligoribonuclease; PDBTitle: structure of an oligoribonuclease (orn) from coxiella burnetii
6 | d1j9aa_ |
|  | 99.8 | 19 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
7 | d3b6oa1 |
|  | 99.8 | 22 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
8 | c3cm6A_ |
|  | 99.8 | 24 | PDB header:hydrolase, apoptosis Chain: A: PDB Molecule:cell death-related nuclease 4; PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er
9 | d1w0ha_ |
|  | 99.8 | 15 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
10 | c2xriA_ |
|  | 99.8 | 15 | PDB header:hydrolase Chain: A: PDB Molecule:eri1 exoribonuclease 3; PDBTitle: crystal structure of human eri1 exoribonuclease 3
11 | c2gbzA_ |
|  | 99.8 | 17 | PDB header:hydrolase Chain: A: PDB Molecule:oligoribonuclease; PDBTitle: the crystal structure of xc847 from xanthomonas campestris: a 3-52 oligoribonuclease of dnaq fold family with a novel opposingly-shifted3 helix
12 | d2igia1 |
|  | 99.8 | 15 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
13 | c1zbhA_ |
|  | 99.7 | 13 | PDB header:hydrolase/rna Chain: A: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease
14 | c1zbuB_ |
|  | 99.7 | 13 | PDB header:hydrolase Chain: B: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: crystal structure of full-length 3'-exonuclease
15 | d2guia1 |
|  | 99.7 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
16 | c2p1jB_ |
|  | 99.7 | 23 | PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima
17 | d1wlja_ |
|  | 99.5 | 17 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
18 | c2is3B_ |
|  | 98.3 | 13 | PDB header:hydrolase Chain: B: PDB Molecule:ribonuclease t; PDBTitle: crystal structure of escherichia coli rnase t
19 | d1uoca_ |
|  | 98.1 | 18 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:CAF1-like ribonuclease
20 | d1x9ma1 |
|  | 97.4 | 7 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
21 | c2p51A_ |
| not modelled | 96.7 | 23 | PDB header:hydrolase, gene regulation Chain: A: PDB Molecule:spcc18.06c protein; PDBTitle: crystal structure of the s. pombe pop2p deadenylation2 subunit
22 | d1kfsa1 |
| not modelled | 96.4 | 9 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
23 | d2d5ra1 |
| not modelled | 96.1 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:CAF1-like ribonuclease
24 | d2hhva1 |
| not modelled | 96.1 | 9 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
25 | c2kzzA_ |
| not modelled | 95.7 | 19 | PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: klenow fragment with normal substrate and zinc only
26 | c1njzA_ |
| not modelled | 93.8 | 8 | PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase i; PDBTitle: cytosine-thymine mismatch at the polymerase active site
27 | c2a1sC_ |
| not modelled | 93.5 | 25 | PDB header:hydrolase Chain: C: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of native parn nuclease domain
28 | c1tk0A_ |
| not modelled | 92.8 | 7 | PDB header:transferase/electron transport/dna Chain: A: PDB Molecule:dna polymerase; PDBTitle: t7 dna polymerase ternary complex with 8 oxo guanosine and2 ddctp at the insertion site
29 | c3d45B_ |
| not modelled | 89.5 | 19 | PDB header:hydrolase Chain: B: PDB Molecule:poly(a)-specific ribonuclease parn; PDBTitle: crystal structure of mouse parn in complex with m7gpppg
30 | d1wn7a1 |
| not modelled | 89.2 | 22 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
31 | d1d5aa1 |
| not modelled | 83.9 | 15 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
32 | d1tgoa1 |
| not modelled | 81.0 | 24 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
33 | d1qhta1 |
| not modelled | 80.0 | 16 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
34 | c2gv9B_ |
| not modelled | 74.5 | 12 | PDB header:transferase Chain: B: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase
35 | d1yt3a3 |
| not modelled | 65.2 | 11 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
36 | c3iayA_ |
| not modelled | 64.9 | 18 | PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase delta catalytic subunit; PDBTitle: ternary complex of dna polymerase delta
37 | c2vwkA_ |
| not modelled | 61.4 | 22 | PDB header:dna replication Chain: A: PDB Molecule:dna polymerase; PDBTitle: uracil recognition in archaeal dna polymerases captured by2 x-ray crystallography. v93q polymerase variant
38 | c4ktqA_ |
| not modelled | 58.8 | 17 | PDB header:transferase/dna Chain: A: PDB Molecule:protein (large fragment of dna polymerase i); PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna
39 | c2e6mA_ |
| not modelled | 53.9 | 12 | PDB header:hydrolase Chain: A: PDB Molecule:werner syndrome atp-dependent helicase homolog; PDBTitle: structure of mouse werner exonuclease domain
40 | c1yt3A_ |
| not modelled | 51.0 | 15 | PDB header:hydrolase,translation Chain: A: PDB Molecule:ribonuclease d; PDBTitle: crystal structure of escherichia coli rnase d, an2 exoribonuclease involved in structured rna processing
41 | c1d5aA_ |
| not modelled | 45.4 | 20 | PDB header:transferase Chain: A: PDB Molecule:protein (dna polymerase); PDBTitle: crystal structure of an archaebacterial dna polymerase2 d.tok. deposition of second native structure at 2.43 angstrom
42 | d1ih7a1 |
| not modelled | 27.7 | 20 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
43 | c2w0iA_ |
| not modelled | 17.6 | 10 | PDB header:transferase Chain: A: PDB Molecule:twinfilin-2; PDBTitle: structure of c-terminal actin depolymerizing factor2 homology (adf-h) domain of human twinfilin-2
44 | c2kd5A_ |
| not modelled | 13.2 | 13 | PDB header:hormone Chain: A: PDB Molecule:actin severing and dynamics regulatory protein; PDBTitle: solution structure of adf/cofilin (ldcof) from leishmania donovani
45 | d1ak7a_ |
| not modelled | 11.0 | 10 | Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like
46 | c3hhjA_ |
| not modelled | 10.7 | 11 | PDB header:hydrolase Chain: A: PDB Molecule:mutator mutt protein; PDBTitle: crystal structure of mutator mutt from bartonella henselae
47 | c3cymA_ |
| not modelled | 10.6 | 22 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bad_0989; PDBTitle: crystal structure of protein bad_0989 from bifidobacterium2 adolescentis
48 | c2d3wB_ |
| not modelled | 10.2 | 18 | PDB header:biosynthetic protein Chain: B: PDB Molecule:probable atp-dependent transporter sufc; PDBTitle: crystal structure of escherichia coli sufc, an atpase2 compenent of the suf iron-sulfur cluster assembly machinery
49 | d2dk8a1 |
| not modelled | 9.6 | 22 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RPO3F domain-like
50 | c2xfaA_ |
| not modelled | 9.3 | 10 | PDB header:protein binding Chain: A: PDB Molecule:actin depolymerization factor 2; PDBTitle: crystal structure of plasmodium berghei actin2 depolymerization factor 2
51 | d2hbka2 |
| not modelled | 8.5 | 15 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
52 | c2i2qA_ |
| not modelled | 8.4 | 10 | PDB header:actin-binding protein Chain: A: PDB Molecule:cofilin; PDBTitle: fission yeast cofilin
53 | d1q8ga_ |
| not modelled | 8.1 | 10 | Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like
54 | d1q8ia1 |
| not modelled | 6.5 | 14 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
55 | c3iydB_ |
| not modelled | 6.5 | 24 | PDB header:transcription/dna Chain: B: PDB Molecule:dna-directed rna polymerase subunit alpha; PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
56 | d1cnua_ |
| not modelled | 5.3 | 10 | Fold:Gelsolin-like Superfamily:Actin depolymerizing proteins Family:Cofilin-like
57 | d1s5ja1 |
| not modelled | 5.3 | 12 | Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:DnaQ-like 3'-5' exonuclease
58 | c1s5jA_ |
| not modelled | 5.2 | 20 | PDB header:transferase Chain: A: PDB Molecule:dna polymerase i; PDBTitle: insight in dna replication: the crystal structure of dna2 polymerase b1 from the archaeon sulfolobus solfataricus