Phyre 2 alignment of C0Z3X9 with c3iydB_

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Job Description | C0Z3X9
Confidence | 6.50% | Date | Thu Jan 5 10:55:44 GMT 2012
Rank | 55 | Aligned Residues | 21
% Identity | 24% | Template | c3iydB_
PDB info | PDB header:transcription/dna | Chain: B: PDB Molecule:dna-directed rna polymerase subunit alpha; | PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
Resolution | 19.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | D | T | D | K | Q | P | T | F | L | F | H | D | Y | E | T | F | G | . | T | H | P | A
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Template Sequence |  | E | Q | R | T | D | L | D | K | L | V | I | E | M | E | T | N | G | T | I | D | P | E
Template Known Secondary structure |  | S | S |  | S | S | B |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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