BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (139 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_E... 287 9e-77 UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_... 162 4e-39 UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_... 143 2e-33 UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN 138 5e-32 UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD... 131 5e-30 UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=R... 127 1e-28 UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD... 124 1e-27 UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 ... 123 2e-27 UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_P... 119 3e-26 UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (cla... 118 7e-26 UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=R... 116 2e-25 UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD... 115 3e-25 UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mits... 114 9e-25 UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM 114 1e-24 UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 112 4e-24 UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD 108 4e-23 UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (clas... 108 4e-23 UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae T... 108 5e-23 UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID... 98 1e-19 UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus ... 97 2e-19 UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostri... 94 1e-18 UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 ... 93 2e-18 UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 ... 91 1e-17 UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxi... 86 3e-16 UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B... 85 6e-16 UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verruc... 76 4e-13 UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 ... 74 1e-12 UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macroco... 71 9e-12 UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales Rep... 68 8e-11 UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary comp... 67 1e-10 UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostri... 53 3e-06 UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria Rep... 48 1e-04 UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_... 48 1e-04 UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales Rep... 47 1e-04 UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID... 47 2e-04 UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ12... 42 0.006 UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia... 41 0.012 UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas... 41 0.014 UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostri... 40 0.027 >UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_ECO5E Length = 139 Score = 287 bits (734), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN Sbjct: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI Sbjct: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 Query: 121 RSGECSPYANIILCAGVTF 139 RSGECSPYANIILCAGVTF Sbjct: 121 RSGECSPYANIILCAGVTF 139 >UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_VIBC3 Length = 139 Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 72/139 (51%), Positives = 103/139 (74%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK T+LNS++S +++ LGHTD + +CDAGLPIP TRID+ALT GVPSF++ + V+ + Sbjct: 1 MKKSTLLNSELSYLVATLGHTDEITICDAGLPIPDEVTRIDLALTHGVPSFLETVRVILS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E Q+E+ I+A+E +P LHE L L+ ++ G I I+Y +HE FKQ+T +S+AV+ Sbjct: 61 ESQIESVIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAFKQRTLQSRAVV 120 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC+PYAN+I AGV F Sbjct: 121 RTGECTPYANVIFQAGVVF 139 >UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_GEOTN Length = 132 Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 64/139 (46%), Positives = 97/139 (69%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +++++++ LGHTDT+V+ D GLPIP RID+AL +G P F+ VL V N Sbjct: 1 MKKNGILNKELNTLLASLGHTDTIVIADCGLPIPNEEARIDLALVKGFPPFLSVLDAVIN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++AEEIK NP ++E++ K + + + I++ HE+FK+ T +++AVI Sbjct: 61 ELVVEEIVLAEEIKTQNPDVYESI--------KARMSDVPIQFVRHEEFKEMTKQAKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL +GV F Sbjct: 113 RTGEATPYANIILRSGVNF 131 >UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN Length = 131 Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 65/139 (46%), Positives = 96/139 (69%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VLNS+I+++++ LGHTDT+V+ D GLPIP S RID+A+ G PSF+ VL VV Sbjct: 1 MKKHGVLNSEIAAILAALGHTDTIVIADCGLPIPDSVKRIDLAVELGKPSFLDVLQVVIE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 +M +E +AEEI +N ++++ + T L++ Y HE+FK++T +++A+I Sbjct: 61 DMAIEKVTVAEEITTNNREIYKEIETRLKEAN--------FEYVLHEEFKEKTKQAKAII 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL AGV F Sbjct: 113 RTGEATPYANIILHAGVIF 131 >UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD_CLONN Length = 131 Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/139 (47%), Positives = 93/139 (66%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS I V+S++GHTD + + D+GLPIP T RID+AL +GVP+FMQ L V Sbjct: 1 MKKTPLLNSSICEVVSKMGHTDMIAIGDSGLPIPDDTKRIDLALIKGVPTFMQTLKAVLL 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E QVE IIA E K +P+ E ++K G+ ++I + +HE+ K++ + +AVI Sbjct: 61 EQQVEEVIIAHETKEVSPE-------TFENIKKEIGD-VKITFISHEELKKELSNCKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL +GV F Sbjct: 113 RTGEQTPYANIILKSGVVF 131 >UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=RBSD_PSEFS Length = 134 Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/139 (47%), Positives = 88/139 (63%), Gaps = 5/139 (3%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +S VI+ LGH D LV+ DAGLP+P ID+ALTQG+P F+ L +V + Sbjct: 1 MKKTPLLNIALSRVIASLGHGDILVIGDAGLPVPPGVELIDLALTQGIPDFISALRIVLS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVE+ ++AEEI P L L L + E R +HE FKQ + +++AV+ Sbjct: 61 EMQVESHVLAEEILLKQP----PALNELNTLSD-EAALGERRLVSHEAFKQLSRKARAVV 115 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC PY NI L +GVTF Sbjct: 116 RTGECQPYCNIALVSGVTF 134 >UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD_BACLD Length = 131 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/139 (45%), Positives = 89/139 (64%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS I+ +++ LGHTDT+V+ DAGLP+P +ID+ALT G P F +V ++ + Sbjct: 1 MKKHGILNSHIAKLLADLGHTDTIVIADAGLPVPPGVPKIDLALTLGTPGFREVTKLIAD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EM VE A+EI+ NP L K + + +I Y HE FK+ T++++AVI Sbjct: 61 EMVVEKVTAAQEIESVNPGQAAFL--------KAEFSNQKIDYIPHEAFKKATSQAKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN IL AGV F Sbjct: 113 RTGEATPYANCILHAGVIF 131 >UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 Tax=Lactobacillales RepID=B4U1H5_STREM Length = 135 Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 60/139 (43%), Positives = 88/139 (63%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNSD++ + + LGHTD + + D GLP+P +ID+AL +G+PSF VLG+ Sbjct: 4 MKKHGILNSDVAKLAADLGHTDRVCIGDLGLPVPVGVPKIDLALKRGLPSFQDVLGMYLE 63 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + +E I+AEEIK NP +LT L+ +T+ + Y +HE+ K +AVI Sbjct: 64 HVVIEKVILAEEIKTANPDQLAAILTQLD-------DTVAVEYVSHEELKALNKSVKAVI 116 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PY+NIIL +GVT Sbjct: 117 RTGEDTPYSNIILQSGVTI 135 >UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_PSEF5 Length = 134 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 5/139 (3%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +S +I+ LGH D +V+ DAGLP+P ID+ALT GVP F+ L V+ + Sbjct: 1 MKKTPLLNIALSRLIASLGHGDIVVIGDAGLPVPPGVELIDLALTHGVPDFLTTLKVLLS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVE ++AEEI P T L LE + G + + HE FK + +++AVI Sbjct: 61 EMQVERHVLAEEILLKQP----TPLAALEGMTAG-GELGQRQLMNHEDFKVLSRQARAVI 115 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC PY NI L AGVTF Sbjct: 116 RTGECQPYCNIALIAGVTF 134 >UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (class) RepID=RBSD2_STRGG Length = 129 Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN ++ I+ LGH DT++VCDAG+PIP ID+A G PSF +VL + + Sbjct: 1 MKKSGILNRHLAGAIAELGHGDTVLVCDAGMPIPPGPRVIDLAFRAGTPSFAEVLDGLLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE A AEEI+ NP L H L+ H++ K +TA ++ V+ Sbjct: 61 ELVVEGATAAEEIRDANPDAAALLDVHFPWLEA----------VPHDELKARTAAARLVV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE PYAN++L GV F Sbjct: 111 RTGEARPYANVLLRCGVFF 129 >UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=RBSD_THEP1 Length = 135 Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 85/139 (61%), Gaps = 4/139 (2%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LNS IS +++ +GHTD L + D G PIP ++D+ + +G P ++V+ V+ Sbjct: 1 MKRVGILNSTISEMVANMGHTDMLAIVDMGFPIPDGAKKVDLVVDKGKPGLLEVVEVILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E++VE I+AEE+ NP+ + L+ L + ++I + HE+FK+ + S+ + Sbjct: 61 ELEVEKIILAEEMNEKNPETRDLLI----NLVGKNNSNVKIEFVPHEEFKKISRTSKGFV 116 Query: 121 RSGECSPYANIILCAGVTF 139 R+G PY+N+IL +GV F Sbjct: 117 RTGADRPYSNVILVSGVIF 135 >UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD_LACLS Length = 132 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 86/139 (61%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS+++ + LGHTD + + D GLP+P +ID+ALT+G P+F +VL + Sbjct: 1 MKKEVILNSELAKIADDLGHTDQVCIGDLGLPVPSGVKKIDLALTRGKPTFQEVLDIYLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + VE +A+EIK +NP+ + LLT L +E+ + +HE K + +AV+ Sbjct: 61 NILVEKIYLADEIKENNPEQLKILLTKLSA-------DVEVVFVSHETLKLMNHDVKAVV 113 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PY+NIIL +GV Sbjct: 114 RTGENTPYSNIILQSGVAL 132 >UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ30_9FIRM Length = 131 Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VL++++S I+ LGH D ++ DAG+PIP ID+A+T GVP+F QVL V Sbjct: 1 MKKHGVLHAELSRCIAALGHKDLFMIGDAGMPIPPGVEIIDLAVTAGVPTFRQVLDAVLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E +VE +A+EI+ HN H L QK +G E Y H++ K +A+++ I Sbjct: 61 EAEVEGYYLADEIRTHNEPQHAYL------QQKLKGVPAE--YMPHDELKTFSAKAKFAI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE SPY N+IL AGV F Sbjct: 113 RTGEFSPYPNVILRAGVVF 131 >UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM Length = 130 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 90/139 (64%), Gaps = 9/139 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VL+ D++++I+ LGH D +VV D+GLP+P ID+A+T+G+P + VL V+ Sbjct: 1 MKKQGVLHRDLAALIASLGHRDAIVVADSGLPVPPGVNCIDLAVTKGIPPLLPVLQVILY 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EM VE +IA+E+ Q++++L+ + + + + +HEQ K + ++AVI Sbjct: 61 EMVVERVVIADEL-----QVNQSLVKSIAD----EVTPVSLEVVSHEQLKSLSQRARAVI 111 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN+IL +GV F Sbjct: 112 RTGEWTPYANVILYSGVAF 130 >UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 Length = 134 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 9/141 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VLN IS I+ +GH D L + DAG+PIP RID+A+T+ +P F+ VL V Sbjct: 1 MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE--SQA 118 EM+++ +AEEIK HNP T L+Q+++ + IEI + HE+ K A ++ Sbjct: 61 EMEIQKIYLAEEIKEHNP-------TQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKG 113 Query: 119 VIRSGECSPYANIILCAGVTF 139 IR+GE +PY+NI L + VTF Sbjct: 114 NIRTGETTPYSNIALESNVTF 134 >UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD Length = 129 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN+ +S ++RLGHTD L+VCD+G+P+P +D+A G+P+F VL + Sbjct: 1 MKRAGILNAALSGGLARLGHTDELLVCDSGMPLPPGVEVVDLAFLPGIPAFADVLDGILA 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE A A E++ N + L L L Y H + K+ + S+ ++ Sbjct: 61 ELVVEGATAAREVRTANAECDALLAARLPGLT----------YIPHSELKRLSRSSRLIV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE PYAN++L GV F Sbjct: 111 RTGEARPYANVLLRCGVAF 129 >UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (class) RepID=RBSD2_RUBXD Length = 154 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 9/138 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN +S++++ GHTD LVVCDAG PIP+ R+D+A+ +P VL ++ Sbjct: 1 MKRSGILNQPLSNILASFGHTDLLVVCDAGFPIPRDAQRVDLAIAPDLPDLRTVLSLINE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES-QAV 119 E E +IAEE+ NP LH L H + +E HE+ Q A S +A+ Sbjct: 61 EFITEKVVIAEEMAEFNPPLHGWLQKHF--------SGVEFERRPHEEMLTQVATSAKAI 112 Query: 120 IRSGECSPYANIILCAGV 137 +R+G P+ NI L +GV Sbjct: 113 VRTGAFDPWGNIGLVSGV 130 >UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae TMO RepID=RBSD_THELT Length = 140 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 87/139 (62%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN ++S +I+ +GH D L + D+G PI + +D++L G P ++++ + Sbjct: 1 MKKNGILNRELSYLIASMGHGDILSIVDSGFPISEDVFCVDLSLIAGKPKIVEIIIPLLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+++E +IAEEIK +P+ H+ LL+ + ++I Y HE+FK + ES+ V+ Sbjct: 61 ELEIEKVLIAEEIKMISPKYHQKLLSIFPK-------NVQIEYIPHEKFKDRVRESKGVV 113 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + Y+++IL GVT+ Sbjct: 114 RTGEQTSYSSVILVGGVTY 132 >UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID=RBSD_PROAC Length = 127 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 12/139 (8%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN + + ++RLGHT T VV DAGLPIP ID+A+ G P F +V + + Sbjct: 1 MKKSGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAILD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ V+ A IA E H P E+ + E+++ E+ +HE K+ V+ Sbjct: 61 EVVVDGATIAHEALGHEP---ESWVR--ERIE-------EVHTVSHEDLKKALPNVSFVV 108 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PY+N+I+ GV F Sbjct: 109 RTGETTPYSNVIVRCGVPF 127 >UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM8_ALIAD Length = 131 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 9/139 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +L+ +S +I+ LGH + + V D GLPIP +D+A+ G+PSF+ V + Sbjct: 1 MKRSGILHGRLSQIIAELGHGELIAVADCGLPIPPGIELVDLAIKPGMPSFLDVCDTILT 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE I+A E+ ++ HL + G ++ H FKQ ++V+ Sbjct: 61 ELVVEDFIVANELAIRG----SGVVDHLRERAGVLG-----KFIPHSDFKQTLRNVRSVV 111 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN+I AGV F Sbjct: 112 RTGEWTPYANVIFVAGVAF 130 >UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S316_9CLOT Length = 132 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K +L+ ++ V++ L H DT+++ DAGLPIPK R+D+ G P+++ VL + Sbjct: 1 MLKTGILHPQLARVLAELRHKDTIIIGDAGLPIPKGVERVDLGWRPGDPAYLDVLEEILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + VE A+ A+E P H+ L L Q + + Y H + K+++ +++A++ Sbjct: 61 YIVVEGAVFADEALTVTPDFHKKALDLLPQ-------GLPVEYIPHTELKERSKDAKAIV 113 Query: 121 RSGECSPYANIILCAGVTF 139 +GE + Y N+IL AG + Sbjct: 114 LTGEFTGYTNVILSAGCAY 132 >UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 Tax=Corynebacterium matruchotii RepID=C5VEK7_9CORY Length = 125 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 14/139 (10%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN ++ I+RLGHTDT +CD GLP+P ID+ L GVPSF QV + Sbjct: 1 MKRDGLLNPQLNQAIARLGHTDTFAICDCGLPLPPQARIIDLTLIHGVPSFEQVAEAILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ +E IA Q + ++ L I HE FK+Q + V+ Sbjct: 61 EVVIEKVTIAT-------QTPDVIINTLPA-------DAPITKIDHEDFKKQINDCTFVV 106 Query: 121 RSGECSPYANIILCAGVTF 139 R+G +PYAN I GV+F Sbjct: 107 RTGSTTPYANAIYYCGVSF 125 >UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH0_9FIRM Length = 136 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 9/140 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K ++N+DI +++ LGH D + + DAG +P +ID+A G+P + +L V + Sbjct: 1 MLKHGIINADIKYLMASLGHRDRIAITDAGYNVPSGIPKIDIAFLPGMPELLPILDGVLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++AEEIK +P+LHE + + I Y H +F + + + VI Sbjct: 61 EIAVEQVVLAEEIKSMSPKLHEEYRKRFPEKK--------ICYIPHSEFDEVIKDVKGVI 112 Query: 121 RSGECSPYA-NIILCAGVTF 139 R+G+ +A NIIL AG T+ Sbjct: 113 RTGQYGLHAPNIILQAGCTY 132 >UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Streptomyces RepID=B4UZK2_9ACTO Length = 131 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M++ +++ +++ +I+ L HTDT V+ DAGLP+ T +D+ G F+ V+ V N Sbjct: 1 MQRKGIIHRELAGLIAGLRHTDTFVISDAGLPLAPDTPVVDLGYRYGQSPFLDVIQTVLN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE + + ++I+ NP +H L + ++ H+QFK + + + + Sbjct: 61 EIVVEHSWVTDKIREVNPTVHTGL----------RSFGLDPEPIDHDQFKARVRDVKFAV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + YAN++L AGV F Sbjct: 111 RTGEDTFYANVLLRAGVPF 129 >UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B1JKB6_YERPY Length = 167 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 7/136 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M+ +L+ ++++ ++ LGHTD ++V DAG PIP RID+ G + +L V+ Sbjct: 1 MRPDRILHPELAAALATLGHTDIILVTDAGFPIPPQAKRIDLGFWPGTVDVLDILRVLRK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-ESQAV 119 E+ VE A E++ +PQL+ + T + G+ E + +HE A +++ V Sbjct: 61 EIFVEEVRFASEVRDCHPQLYRDVQT------LYTGSGAEFQAASHETLCHDLAYQAKVV 114 Query: 120 IRSGECSPYANIILCA 135 IRSG +P+AN L A Sbjct: 115 IRSGSFNPWANFALVA 130 >UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZN30_OPITP Length = 129 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 9/134 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M + +LN + S+++R+ HT+T+VV D G P+ +D++L VP+ QVL + Sbjct: 1 MIRTGILNPAVLSLLARVRHTNTVVVADRGFPLWPQIETVDLSLVDDVPTVRQVLDAILP 60 Query: 61 EMQVEAAIIAEEIKHHN-PQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAV 119 + + EE + N P + +E L+ H G I + + H +FK++ + + Sbjct: 61 QYVIGRIFAEEEFRQVNSPSV-------VEALRDHTG-AIPLVFEPHVEFKRRVPHAIGL 112 Query: 120 IRSGECSPYANIIL 133 IR+G+ +PYAN+IL Sbjct: 113 IRTGDSTPYANLIL 126 >UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 Tax=Mycoplasma pulmonis RepID=Q98PW9_MYCPU Length = 133 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 11/133 (8%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVE 65 ++N+ ++ +SR+ +VVCD PIP +D++L VPSF Q++ ++ + ++ Sbjct: 8 IINTTLNETLSRIQTNQKIVVCDPYFPIPVGANILDLSLIANVPSFKQLMFLIIENLHIK 67 Query: 66 AAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAV--IRSG 123 A +++ EIK HN L++ +L N E+FK ++++ V +R G Sbjct: 68 ALVLSNEIKEHNYDYLAYLIS--SKLPISLSNNF-------EEFKYLSSQNDVVLYVRVG 118 Query: 124 ECSPYANIILCAG 136 E +P++N I+ AG Sbjct: 119 ELTPFSNTIVVAG 131 >UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z6_MACCJ Length = 208 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 49/89 (55%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K LNS+IS V+S LGHTDT+V+ D GLP+PK +ID+A+ QG+PSF+ + + + Sbjct: 1 MYKTGTLNSEISKVLSDLGHTDTIVIGDCGLPVPKGVQKIDLAVRQGLPSFIDIATLFMD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLE 89 + +I I H E Sbjct: 61 RFKRRNVLIVGAIAMGLSFFALAWAFHFE 89 >UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales RepID=A3DCF4_CLOTH Length = 151 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 73/137 (53%), Gaps = 8/137 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M + +LN DI++ +++LGHTD +++ DAGL IP +T ID++L P+ + VL V+ Sbjct: 11 MVETGILNRDIAAELAKLGHTDRVLIADAGLAIPNTTKVIDVSLDVNFPTTVDVLKVLLK 70 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQ-TAESQAV 119 VE I+++ +P ++ L+ ++ ++ H + T E + Sbjct: 71 HFSVEKLILSQATVDVSPSRYKEYLSLFDE-------SVPCEIVEHSTLRDTLTKEVKFA 123 Query: 120 IRSGECSPYANIILCAG 136 IR+G+ + +NIIL + Sbjct: 124 IRTGDFTANSNIILVSA 140 >UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary component n=3 Tax=Actinomycetales RepID=D1BIP0_SANKS Length = 127 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 12/139 (8%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ VLN ++ ++RLGH ++V D G PIP +D+++ GVP F QVL V + Sbjct: 1 MKRSGVLNPALAEGLARLGHGHLVLVVDCGTPIPPGARVVDVSVVAGVPGFTQVLDAVLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++ A E+ T + + +G + E+ HE K + VI Sbjct: 61 EIVVEGSVAAS----------ESAGTVVAGWLEERGLSPEL--VPHEDLKALLPGAALVI 108 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + +AN+ L GV F Sbjct: 109 RTGEATAWANVGLRCGVPF 127 >UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL3_EUBSP Length = 153 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 4/135 (2%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQV 64 +L D+ + +GH D LV+ DAG P + R+ + +P ++ +L + V Sbjct: 18 ILPPDLVKYMMEMGHADYLVIADAGFPGTAHSKRMIRMDSAEIPELLEAILPFFPLDYFV 77 Query: 65 EAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGN--TIEIRYTTHEQFKQQTAESQAVIRS 122 + + + + P++ T+ E L+K+ + + +Y F ++ ++ VI++ Sbjct: 78 DYPVRLMQKLDYEPEVM-IWKTYEELLKKYDKDHAFKQFKYLDRLDFYKEAEDAYVVIQT 136 Query: 123 GECSPYANIILCAGV 137 G+ S Y NIIL GV Sbjct: 137 GDTSRYGNIILQKGV 151 >UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria RepID=B1I9X5_STRPI Length = 146 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 2/132 (1%) Query: 7 LNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQVE 65 ++ D+ + +GH D +V+ DA P ++ +P + +L ++ + V+ Sbjct: 9 ISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYLMPLDSYVD 68 Query: 66 AAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGEC 125 ++I + + + + T+ + ++ H + I Y E F +++ ++ A++ +GE Sbjct: 69 SSIQFMNVVSGD-DIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYAIVATGET 127 Query: 126 SPYANIILCAGV 137 S YANIIL GV Sbjct: 128 SLYANIILKKGV 139 >UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_9MOLU Length = 156 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 15/142 (10%) Query: 3 KGTVLNSDISSVISRLGHTDTLVVCDAG--------LPIPKSTTRIDMALTQGVPSFMQV 54 K +L+ +++V++ L H + L + DAG P+ S ID+ + G PSF + Sbjct: 4 KKRILHERLAAVVASLRHGEMLFIADAGSGTSSKALYPLDSSVEYIDVEVVTGSPSFEDI 63 Query: 55 LGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA 114 + + E AI+ E++ + + ++ L+ L + H + I Y ++ K Sbjct: 64 VTTLVACGDFEGAIVTEDMIEVDQKDYQLLVDLLGKKNIHSMHYIPEYYEMRDRCK---- 119 Query: 115 ESQAVIRSGECSPYANIILCAG 136 AV+++G+ +A IL AG Sbjct: 120 ---AVVQTGDYGVHAQAILIAG 138 >UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales RepID=C7ILP1_9CLOT Length = 137 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 15/144 (10%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPI----PKSTTRIDMALTQGVPSFMQVLG 56 M K +N D+ +++ GH D +++ D P+ +T ++ + LT G+P QVL Sbjct: 1 MLKTACINPDLIGLLAACGHGDKVLIADGNYPLESKTANNTAKMYLGLTHGIPLATQVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQL---HETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 V+ + +E A + P++ + LL +L K + RY ++ K+ Sbjct: 61 VLGKTIAIEGAEVMVPESGDEPEIFAEFQELLPDGIKLSKLE------RYDFYDVCKKDN 114 Query: 114 AESQAVIRSGECSPYANIILCAGV 137 + I +GE +ANI++ GV Sbjct: 115 I--KIAISTGEQRVFANILITVGV 136 >UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID=C1BNJ8_9MAXI Length = 152 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 9/141 (6%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTN 60 ++++ D+ ++++GH D +V+ D+ P + K ++ A +P +Q +L + Sbjct: 9 SIISPDLLYTLAQMGHGDEIVLADSNFPSFSVSKCGAKLVDASGHSIPDLLQAILPLFPL 68 Query: 61 EMQV-EAAIIAEEI---KHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + V AI+ E + K N ++ + T+ + L +G I + +F ++ S Sbjct: 69 DHYVFNPAIVMELVNADKKKNLKI-DIWSTYEKILADSEGRDIPMLEVERFEFYERAKRS 127 Query: 117 QAVIRSGECSPYANIILCAGV 137 AV+ +GE S Y NIIL GV Sbjct: 128 YAVVSTGETSIYGNIILKKGV 148 >UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ125_HUMAN Length = 154 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 6/139 (4%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQ---GVPSFMQ-VLGVVTN 60 +L+ ++ ++R+GH D +V+ D P M + G+P ++ VL ++ Sbjct: 9 ALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVLKLLPL 68 Query: 61 EMQVEAAIIAEEIKHHNPQ--LHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + VE+ E+ + + L + T E + + G + +F ++ ++ A Sbjct: 69 DTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERAKKAFA 128 Query: 119 VIRSGECSPYANIILCAGV 137 V+ +GE + Y N+IL GV Sbjct: 129 VVATGETALYGNLILRKGV 147 >UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRI2_9FIRM Length = 136 Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust. Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 7/138 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPK--STTRIDMALTQGVPSFMQVLGVV 58 M KG +++ ++ ++ GH +++ D P+ + S +I + L GVPS ++VL + Sbjct: 1 MLKGKLIHPELIHQLALCGHGSKILIADGNYPLEEKSSGVKIFLGLGPGVPSVIEVLAAI 60 Query: 59 TNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + ++E A + P+ + + +RY + ++ A Sbjct: 61 HSVCEIEKAQVMVPEDDREPE----IFGEFRRELPDLELEELVRYDFYAACMEEGVLKLA 116 Query: 119 VIRSGECSPYANIILCAG 136 V +GE +ANI+L G Sbjct: 117 V-STGEQRTFANILLTVG 133 >UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PP4_PSEA6 Length = 144 Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 18/145 (12%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKST----TRIDMALTQGVPSFMQVLG 56 M K V++ I + R GH +V+ D LP+ T T + + G+ + VL Sbjct: 1 MLKTAVIHPTILEALGRSGHFAQVVIADGNLPVAAMTGPNSTLVHLNFRPGMLDALSVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQF----KQQ 112 + ++ AI+ E+ N ++H +Q ++ + E++ K + Sbjct: 61 GILEVCPIQGAIVMEKPPEANAEIH----------TAYQALLGDVTWEAMERWAFYDKIR 110 Query: 113 TAESQAVIRSGECSPYANIILCAGV 137 + +I++GE +AN+IL GV Sbjct: 111 APATTLIIQTGEQRRFANLILTVGV 135 >UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL4_9CLOT Length = 143 Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust. Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 14/144 (9%) Query: 2 KKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKS----TTRID----MALTQGVPSFMQ 53 K +++ ++ +++ +GH D + DA P S R D AL V Sbjct: 4 KISPLISPELLKILAEMGHGDVIAFGDANFPAESSKASYVVRADGIPIPALLDAVLELFP 63 Query: 54 VLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 + VT +++ + ++ + P++ E + + L KH + +I Y F T Sbjct: 64 IDTFVTQPVKLMQVVPGDD---YVPEVVEE---YKKILAKHDVDEDKIEYLERFDFYGHT 117 Query: 114 AESQAVIRSGECSPYANIILCAGV 137 + V+ +GE + YANI L GV Sbjct: 118 DTAYCVVATGETARYANITLKKGV 141 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_E... 190 1e-47 UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_... 179 2e-44 UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_... 177 1e-43 UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD... 172 3e-42 UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN 169 2e-41 UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (cla... 169 3e-41 UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mits... 168 6e-41 UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 ... 166 3e-40 UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD 163 2e-39 UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD... 160 1e-38 UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_P... 160 1e-38 UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=R... 160 2e-38 UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=R... 159 2e-38 UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD... 158 6e-38 UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostri... 158 7e-38 UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae T... 156 2e-37 UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM 155 6e-37 UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus ... 153 1e-36 UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (clas... 150 1e-35 UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID... 149 2e-35 UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxi... 149 2e-35 UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 ... 149 3e-35 UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 ... 148 4e-35 UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 144 7e-34 UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B... 137 9e-32 UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary comp... 129 3e-29 UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verruc... 128 5e-29 UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales Rep... 127 9e-29 UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria Rep... 127 1e-28 UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostri... 123 2e-27 UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID... 115 5e-25 UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_... 110 1e-23 UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 ... 110 1e-23 UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales Rep... 106 3e-22 UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macroco... 101 5e-21 Sequences not found previously or not previously below threshold: UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ12... 97 3e-19 UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostri... 93 3e-18 UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organis... 92 6e-18 UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette tran... 90 3e-17 UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUC... 89 4e-17 UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rham... 85 7e-16 UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B... 84 2e-15 UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria Re... 83 3e-15 UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas... 82 4e-15 UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7... 82 7e-15 UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria R... 82 7e-15 UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia... 80 2e-14 UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5... 79 4e-14 UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacte... 78 1e-13 UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria Re... 78 1e-13 UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostri... 76 4e-13 UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Trepone... 75 6e-13 UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radio... 74 2e-12 UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Lab... 72 4e-12 UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus ... 72 5e-12 UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=... 72 7e-12 UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhi... 72 8e-12 UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae Re... 72 8e-12 UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium legumin... 71 1e-11 UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinom... 71 1e-11 UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacte... 69 6e-11 UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobac... 68 1e-10 UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis... 67 2e-10 UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2... 65 6e-10 UniRef50_B3T6P2 Putative RbsD / FucU transport protein family pr... 65 1e-09 UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cave... 65 1e-09 UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 ... 63 3e-09 UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces... 62 6e-09 UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostri... 60 2e-08 UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum... 57 2e-07 UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F... 56 2e-07 UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter ... 55 5e-07 UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curviba... 51 8e-06 UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteri... 48 7e-05 UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 ... 39 0.051 >UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_ECO5E Length = 139 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN Sbjct: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI Sbjct: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 Query: 121 RSGECSPYANIILCAGVTF 139 RSGECSPYANIILCAGVTF Sbjct: 121 RSGECSPYANIILCAGVTF 139 >UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_VIBC3 Length = 139 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 72/139 (51%), Positives = 103/139 (74%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK T+LNS++S +++ LGHTD + +CDAGLPIP TRID+ALT GVPSF++ + V+ + Sbjct: 1 MKKSTLLNSELSYLVATLGHTDEITICDAGLPIPDEVTRIDLALTHGVPSFLETVRVILS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E Q+E+ I+A+E +P LHE L L+ ++ G I I+Y +HE FKQ+T +S+AV+ Sbjct: 61 ESQIESVIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAFKQRTLQSRAVV 120 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC+PYAN+I AGV F Sbjct: 121 RTGECTPYANVIFQAGVVF 139 >UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_GEOTN Length = 132 Score = 177 bits (448), Expect = 1e-43, Method: Composition-based stats. Identities = 64/139 (46%), Positives = 97/139 (69%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +++++++ LGHTDT+V+ D GLPIP RID+AL +G P F+ VL V N Sbjct: 1 MKKNGILNKELNTLLASLGHTDTIVIADCGLPIPNEEARIDLALVKGFPPFLSVLDAVIN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++AEEIK NP ++E++ K + + + I++ HE+FK+ T +++AVI Sbjct: 61 ELVVEEIVLAEEIKTQNPDVYESI--------KARMSDVPIQFVRHEEFKEMTKQAKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL +GV F Sbjct: 113 RTGEATPYANIILRSGVNF 131 >UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD_BACLD Length = 131 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS I+ +++ LGHTDT+V+ DAGLP+P +ID+ALT G P F +V ++ + Sbjct: 1 MKKHGILNSHIAKLLADLGHTDTIVIADAGLPVPPGVPKIDLALTLGTPGFREVTKLIAD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EM VE A+EI+ NP L + +I Y HE FK+ T++++AVI Sbjct: 61 EMVVEKVTAAQEIESVNPGQAAFLKAEF--------SNQKIDYIPHEAFKKATSQAKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN IL AGV F Sbjct: 113 RTGEATPYANCILHAGVIF 131 >UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN Length = 131 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 96/139 (69%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VLNS+I+++++ LGHTDT+V+ D GLPIP S RID+A+ G PSF+ VL VV Sbjct: 1 MKKHGVLNSEIAAILAALGHTDTIVIADCGLPIPDSVKRIDLAVELGKPSFLDVLQVVIE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 +M +E +AEEI +N ++++ + T L++ Y HE+FK++T +++A+I Sbjct: 61 DMAIEKVTVAEEITTNNREIYKEIETRLKEAN--------FEYVLHEEFKEKTKQAKAII 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL AGV F Sbjct: 113 RTGEATPYANIILHAGVIF 131 >UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (class) RepID=RBSD2_STRGG Length = 129 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN ++ I+ LGH DT++VCDAG+PIP ID+A G PSF +VL + + Sbjct: 1 MKKSGILNRHLAGAIAELGHGDTVLVCDAGMPIPPGPRVIDLAFRAGTPSFAEVLDGLLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE A AEEI+ NP L H L H++ K +TA ++ V+ Sbjct: 61 ELVVEGATAAEEIRDANPDAAALLDVHFPWL----------EAVPHDELKARTAAARLVV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE PYAN++L GV F Sbjct: 111 RTGEARPYANVLLRCGVFF 129 >UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ30_9FIRM Length = 131 Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats. Identities = 58/139 (41%), Positives = 83/139 (59%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VL++++S I+ LGH D ++ DAG+PIP ID+A+T GVP+F QVL V Sbjct: 1 MKKHGVLHAELSRCIAALGHKDLFMIGDAGMPIPPGVEIIDLAVTAGVPTFRQVLDAVLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E +VE +A+EI+ HN H L L+ + Y H++ K +A+++ I Sbjct: 61 EAEVEGYYLADEIRTHNEPQHAYLQQKLK--------GVPAEYMPHDELKTFSAKAKFAI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE SPY N+IL AGV F Sbjct: 113 RTGEFSPYPNVILRAGVVF 131 >UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 Tax=Lactobacillales RepID=B4U1H5_STREM Length = 135 Score = 166 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 7/138 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNSD++ + + LGHTD + + D GLP+P +ID+AL +G+PSF VLG+ Sbjct: 4 MKKHGILNSDVAKLAADLGHTDRVCIGDLGLPVPVGVPKIDLALKRGLPSFQDVLGMYLE 63 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + +E I+AEEIK NP +LT L+ +T+ + Y +HE+ K +AVI Sbjct: 64 HVVIEKVILAEEIKTANPDQLAAILTQLD-------DTVAVEYVSHEELKALNKSVKAVI 116 Query: 121 RSGECSPYANIILCAGVT 138 R+GE +PY+NIIL +GVT Sbjct: 117 RTGEDTPYSNIILQSGVT 134 >UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD Length = 129 Score = 163 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN+ +S ++RLGHTD L+VCD+G+P+P +D+A G+P+F VL + Sbjct: 1 MKRAGILNAALSGGLARLGHTDELLVCDSGMPLPPGVEVVDLAFLPGIPAFADVLDGILA 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE A A E++ N + L L L Y H + K+ + S+ ++ Sbjct: 61 ELVVEGATAAREVRTANAECDALLAARLPGL----------TYIPHSELKRLSRSSRLIV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE PYAN++L GV F Sbjct: 111 RTGEARPYANVLLRCGVAF 129 >UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD_CLONN Length = 131 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS I V+S++GHTD + + D+GLPIP T RID+AL +GVP+FMQ L V Sbjct: 1 MKKTPLLNSSICEVVSKMGHTDMIAIGDSGLPIPDDTKRIDLALIKGVPTFMQTLKAVLL 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E QVE IIA E K +P+ E + K + ++I + +HE+ K++ + +AVI Sbjct: 61 EQQVEEVIIAHETKEVSPETFENI--------KKEIGDVKITFISHEELKKELSNCKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL +GV F Sbjct: 113 RTGEQTPYANIILKSGVVF 131 >UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_PSEF5 Length = 134 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 62/139 (44%), Positives = 83/139 (59%), Gaps = 5/139 (3%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +S +I+ LGH D +V+ DAGLP+P ID+ALT GVP F+ L V+ + Sbjct: 1 MKKTPLLNIALSRLIASLGHGDIVVIGDAGLPVPPGVELIDLALTHGVPDFLTTLKVLLS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVE ++AEEI P L + G + + HE FK + +++AVI Sbjct: 61 EMQVERHVLAEEILLKQPTPLAAL-----EGMTAGGELGQRQLMNHEDFKVLSRQARAVI 115 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC PY NI L AGVTF Sbjct: 116 RTGECQPYCNIALIAGVTF 134 >UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=RBSD_THEP1 Length = 135 Score = 160 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 85/139 (61%), Gaps = 4/139 (2%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LNS IS +++ +GHTD L + D G PIP ++D+ + +G P ++V+ V+ Sbjct: 1 MKRVGILNSTISEMVANMGHTDMLAIVDMGFPIPDGAKKVDLVVDKGKPGLLEVVEVILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E++VE I+AEE+ NP+ + L+ L + ++I + HE+FK+ + S+ + Sbjct: 61 ELEVEKIILAEEMNEKNPETRDLLIN----LVGKNNSNVKIEFVPHEEFKKISRTSKGFV 116 Query: 121 RSGECSPYANIILCAGVTF 139 R+G PY+N+IL +GV F Sbjct: 117 RTGADRPYSNVILVSGVIF 135 >UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=RBSD_PSEFS Length = 134 Score = 159 bits (403), Expect = 2e-38, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +S VI+ LGH D LV+ DAGLP+P ID+ALTQG+P F+ L +V + Sbjct: 1 MKKTPLLNIALSRVIASLGHGDILVIGDAGLPVPPGVELIDLALTQGIPDFISALRIVLS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVE+ ++AEEI P L T + + E R +HE FKQ + +++AV+ Sbjct: 61 EMQVESHVLAEEILLKQPPALNELNTLSD-----EAALGERRLVSHEAFKQLSRKARAVV 115 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC PY NI L +GVTF Sbjct: 116 RTGECQPYCNIALVSGVTF 134 >UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD_LACLS Length = 132 Score = 158 bits (399), Expect = 6e-38, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 7/138 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS+++ + LGHTD + + D GLP+P +ID+ALT+G P+F +VL + Sbjct: 1 MKKEVILNSELAKIADDLGHTDQVCIGDLGLPVPSGVKKIDLALTRGKPTFQEVLDIYLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + VE +A+EIK +NP+ + LLT L +E+ + +HE K + +AV+ Sbjct: 61 NILVEKIYLADEIKENNPEQLKILLTKLSA-------DVEVVFVSHETLKLMNHDVKAVV 113 Query: 121 RSGECSPYANIILCAGVT 138 R+GE +PY+NIIL +GV Sbjct: 114 RTGENTPYSNIILQSGVA 131 >UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S316_9CLOT Length = 132 Score = 158 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K +L+ ++ V++ L H DT+++ DAGLPIPK R+D+ G P+++ VL + Sbjct: 1 MLKTGILHPQLARVLAELRHKDTIIIGDAGLPIPKGVERVDLGWRPGDPAYLDVLEEILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + VE A+ A+E P H+ L L Q + + Y H + K+++ +++A++ Sbjct: 61 YIVVEGAVFADEALTVTPDFHKKALDLLPQ-------GLPVEYIPHTELKERSKDAKAIV 113 Query: 121 RSGECSPYANIILCAGVTF 139 +GE + Y N+IL AG + Sbjct: 114 LTGEFTGYTNVILSAGCAY 132 >UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae TMO RepID=RBSD_THELT Length = 140 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 87/139 (62%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN ++S +I+ +GH D L + D+G PI + +D++L G P ++++ + Sbjct: 1 MKKNGILNRELSYLIASMGHGDILSIVDSGFPISEDVFCVDLSLIAGKPKIVEIIIPLLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+++E +IAEEIK +P+ H+ LL+ + ++I Y HE+FK + ES+ V+ Sbjct: 61 ELEIEKVLIAEEIKMISPKYHQKLLSIFPK-------NVQIEYIPHEKFKDRVRESKGVV 113 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + Y+++IL GVT+ Sbjct: 114 RTGEQTSYSSVILVGGVTY 132 >UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM Length = 130 Score = 155 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 9/139 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VL+ D++++I+ LGH D +VV D+GLP+P ID+A+T+G+P + VL V+ Sbjct: 1 MKKQGVLHRDLAALIASLGHRDAIVVADSGLPVPPGVNCIDLAVTKGIPPLLPVLQVILY 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EM VE +IA+E+ N L +++ + + + +HEQ K + ++AVI Sbjct: 61 EMVVERVVIADEL-QVNQSLVKSIAD--------EVTPVSLEVVSHEQLKSLSQRARAVI 111 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN+IL +GV F Sbjct: 112 RTGEWTPYANVILYSGVAF 130 >UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM8_ALIAD Length = 131 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 9/139 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +L+ +S +I+ LGH + + V D GLPIP +D+A+ G+PSF+ V + Sbjct: 1 MKRSGILHGRLSQIIAELGHGELIAVADCGLPIPPGIELVDLAIKPGMPSFLDVCDTILT 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE I+A E+ ++ HL + G ++ H FKQ ++V+ Sbjct: 61 ELVVEDFIVANELAIRG----SGVVDHLRERAGVLG-----KFIPHSDFKQTLRNVRSVV 111 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN+I AGV F Sbjct: 112 RTGEWTPYANVIFVAGVAF 130 >UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (class) RepID=RBSD2_RUBXD Length = 154 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 9/138 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN +S++++ GHTD LVVCDAG PIP+ R+D+A+ +P VL ++ Sbjct: 1 MKRSGILNQPLSNILASFGHTDLLVVCDAGFPIPRDAQRVDLAIAPDLPDLRTVLSLINE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE-SQAV 119 E E +IAEE+ NP LH L H + +E HE+ Q A ++A+ Sbjct: 61 EFITEKVVIAEEMAEFNPPLHGWLQKHF--------SGVEFERRPHEEMLTQVATSAKAI 112 Query: 120 IRSGECSPYANIILCAGV 137 +R+G P+ NI L +GV Sbjct: 113 VRTGAFDPWGNIGLVSGV 130 >UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID=RBSD_PROAC Length = 127 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 12/139 (8%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN + + ++RLGHT T VV DAGLPIP ID+A+ G P F +V + + Sbjct: 1 MKKSGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAILD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ V+ A IA E H P+ + + + E+ +HE K+ V+ Sbjct: 61 EVVVDGATIAHEALGHEPE---SWVRERIE---------EVHTVSHEDLKKALPNVSFVV 108 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PY+N+I+ GV F Sbjct: 109 RTGETTPYSNVIVRCGVPF 127 >UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Streptomyces RepID=B4UZK2_9ACTO Length = 131 Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M++ +++ +++ +I+ L HTDT V+ DAGLP+ T +D+ G F+ V+ V N Sbjct: 1 MQRKGIIHRELAGLIAGLRHTDTFVISDAGLPLAPDTPVVDLGYRYGQSPFLDVIQTVLN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE + + ++I+ NP +H L + ++ H+QFK + + + + Sbjct: 61 EIVVEHSWVTDKIREVNPTVHTGL----------RSFGLDPEPIDHDQFKARVRDVKFAV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + YAN++L AGV F Sbjct: 111 RTGEDTFYANVLLRAGVPF 129 >UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 Tax=Corynebacterium matruchotii RepID=C5VEK7_9CORY Length = 125 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 14/139 (10%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN ++ I+RLGHTDT +CD GLP+P ID+ L GVPSF QV + Sbjct: 1 MKRDGLLNPQLNQAIARLGHTDTFAICDCGLPLPPQARIIDLTLIHGVPSFEQVAEAILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ +E IA Q + ++ L I HE FK+Q + V+ Sbjct: 61 EVVIEKVTIAT-------QTPDVIINTLPA-------DAPITKIDHEDFKKQINDCTFVV 106 Query: 121 RSGECSPYANIILCAGVTF 139 R+G +PYAN I GV+F Sbjct: 107 RTGSTTPYANAIYYCGVSF 125 >UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH0_9FIRM Length = 136 Score = 148 bits (375), Expect = 4e-35, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 9/140 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K ++N+DI +++ LGH D + + DAG +P +ID+A G+P + +L V + Sbjct: 1 MLKHGIINADIKYLMASLGHRDRIAITDAGYNVPSGIPKIDIAFLPGMPELLPILDGVLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++AEEIK +P+LHE + + I Y H +F + + + VI Sbjct: 61 EIAVEQVVLAEEIKSMSPKLHEEYRKRFPEKK--------ICYIPHSEFDEVIKDVKGVI 112 Query: 121 RSGECSPYA-NIILCAGVTF 139 R+G+ +A NIIL AG T+ Sbjct: 113 RTGQYGLHAPNIILQAGCTY 132 >UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 Length = 134 Score = 144 bits (364), Expect = 7e-34, Method: Composition-based stats. Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 9/141 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VLN IS I+ +GH D L + DAG+PIP RID+A+T+ +P F+ VL V Sbjct: 1 MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE--SQA 118 EM+++ +AEEIK HNP T L+Q+++ + IEI + HE+ K A ++ Sbjct: 61 EMEIQKIYLAEEIKEHNP-------TQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKG 113 Query: 119 VIRSGECSPYANIILCAGVTF 139 IR+GE +PY+NI L + VTF Sbjct: 114 NIRTGETTPYSNIALESNVTF 134 >UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B1JKB6_YERPY Length = 167 Score = 137 bits (346), Expect = 9e-32, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 7/136 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M+ +L+ ++++ ++ LGHTD ++V DAG PIP RID+ G + +L V+ Sbjct: 1 MRPDRILHPELAAALATLGHTDIILVTDAGFPIPPQAKRIDLGFWPGTVDVLDILRVLRK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-ESQAV 119 E+ VE A E++ +PQL+ + T + G+ E + +HE A +++ V Sbjct: 61 EIFVEEVRFASEVRDCHPQLYRDVQTL------YTGSGAEFQAASHETLCHDLAYQAKVV 114 Query: 120 IRSGECSPYANIILCA 135 IRSG +P+AN L A Sbjct: 115 IRSGSFNPWANFALVA 130 >UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary component n=3 Tax=Actinomycetales RepID=D1BIP0_SANKS Length = 127 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 12/139 (8%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ VLN ++ ++RLGH ++V D G PIP +D+++ GVP F QVL V + Sbjct: 1 MKRSGVLNPALAEGLARLGHGHLVLVVDCGTPIPPGARVVDVSVVAGVPGFTQVLDAVLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++ A E + L + + HE K + VI Sbjct: 61 EIVVEGSVAASESAG---TVVAGWL---------EERGLSPELVPHEDLKALLPGAALVI 108 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + +AN+ L GV F Sbjct: 109 RTGEATAWANVGLRCGVPF 127 >UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZN30_OPITP Length = 129 Score = 128 bits (322), Expect = 5e-29, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 7/135 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M + +LN + S+++R+ HT+T+VV D G P+ +D++L VP+ QVL + Sbjct: 1 MIRTGILNPAVLSLLARVRHTNTVVVADRGFPLWPQIETVDLSLVDDVPTVRQVLDAILP 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + + EE + N + +E L+ H G I + + H +FK++ + +I Sbjct: 61 QYVIGRIFAEEEFRQVNSP------SVVEALRDHTGA-IPLVFEPHVEFKRRVPHAIGLI 113 Query: 121 RSGECSPYANIILCA 135 R+G+ +PYAN+IL + Sbjct: 114 RTGDSTPYANLILES 128 >UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales RepID=A3DCF4_CLOTH Length = 151 Score = 127 bits (320), Expect = 9e-29, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 8/136 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M + +LN DI++ +++LGHTD +++ DAGL IP +T ID++L P+ + VL V+ Sbjct: 11 MVETGILNRDIAAELAKLGHTDRVLIADAGLAIPNTTKVIDVSLDVNFPTTVDVLKVLLK 70 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ-QTAESQAV 119 VE I+++ +P ++ L+ ++ ++ H + T E + Sbjct: 71 HFSVEKLILSQATVDVSPSRYKEYLSLFDE-------SVPCEIVEHSTLRDTLTKEVKFA 123 Query: 120 IRSGECSPYANIILCA 135 IR+G+ + +NIIL + Sbjct: 124 IRTGDFTANSNIILVS 139 >UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria RepID=B1I9X5_STRPI Length = 146 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 65/133 (48%), Gaps = 2/133 (1%) Query: 7 LNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQVE 65 ++ D+ + +GH D +V+ DA P ++ +P + +L ++ + V+ Sbjct: 9 ISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYLMPLDSYVD 68 Query: 66 AAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGEC 125 ++I + + + + T+ + ++ H + I Y E F +++ ++ A++ +GE Sbjct: 69 SSIQFMNVVSGD-DIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAYAIVATGET 127 Query: 126 SPYANIILCAGVT 138 S YANIIL GV Sbjct: 128 SLYANIILKKGVV 140 >UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL3_EUBSP Length = 153 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M + +L D+ + +GH D LV+ DAG P + R+ + +P ++ +L Sbjct: 11 MLRNIPKILPPDLVKYMMEMGHADYLVIADAGFPGTAHSKRMIRMDSAEIPELLEAILPF 70 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGN--TIEIRYTTHEQFKQQTAE 115 + V+ + + + P++ T+ E L+K+ + + +Y F ++ + Sbjct: 71 FPLDYFVDYPVRLMQKLDYEPEVM-IWKTYEELLKKYDKDHAFKQFKYLDRLDFYKEAED 129 Query: 116 SQAVIRSGECSPYANIILCAGV 137 + VI++G+ S Y NIIL GV Sbjct: 130 AYVVIQTGDTSRYGNIILQKGV 151 >UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID=C1BNJ8_9MAXI Length = 152 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 7/141 (4%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTN 60 ++++ D+ ++++GH D +V+ D+ P + K ++ A +P +Q +L + Sbjct: 9 SIISPDLLYTLAQMGHGDEIVLADSNFPSFSVSKCGAKLVDASGHSIPDLLQAILPLFPL 68 Query: 61 EMQVEAAIIAEEIKHHNPQLH---ETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQ 117 + V I E+ + + + + + T+ + L +G I + +F ++ S Sbjct: 69 DHYVFNPAIVMELVNADKKKNLKIDIWSTYEKILADSEGRDIPMLEVERFEFYERAKRSY 128 Query: 118 AVIRSGECSPYANIILCAGVT 138 AV+ +GE S Y NIIL GV Sbjct: 129 AVVSTGETSIYGNIILKKGVI 149 >UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_9MOLU Length = 156 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 16/145 (11%) Query: 1 MK-KGTVLNSDISSVISRLGHTDTLVVCDAG--------LPIPKSTTRIDMALTQGVPSF 51 MK K +L+ +++V++ L H + L + DAG P+ S ID+ + G PSF Sbjct: 1 MKPKKRILHERLAAVVASLRHGEMLFIADAGSGTSSKALYPLDSSVEYIDVEVVTGSPSF 60 Query: 52 MQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ 111 ++ + E AI+ E++ + + ++ L+ L + H + I Y ++ K Sbjct: 61 EDIVTTLVACGDFEGAIVTEDMIEVDQKDYQLLVDLLGKKNIHSMHYIPEYYEMRDRCK- 119 Query: 112 QTAESQAVIRSGECSPYANIILCAG 136 AV+++G+ +A IL AG Sbjct: 120 ------AVVQTGDYGVHAQAILIAG 138 >UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 Tax=Mycoplasma pulmonis RepID=Q98PW9_MYCPU Length = 133 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 72/133 (54%), Gaps = 11/133 (8%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVE 65 ++N+ ++ +SR+ +VVCD PIP +D++L VPSF Q++ ++ + ++ Sbjct: 8 IINTTLNETLSRIQTNQKIVVCDPYFPIPVGANILDLSLIANVPSFKQLMFLIIENLHIK 67 Query: 66 AAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAV--IRSG 123 A +++ EIK HN L++ +L N E+FK ++++ V +R G Sbjct: 68 ALVLSNEIKEHNYDYLAYLIS--SKLPISLSNNF-------EEFKYLSSQNDVVLYVRVG 118 Query: 124 ECSPYANIILCAG 136 E +P++N I+ AG Sbjct: 119 ELTPFSNTIVVAG 131 >UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales RepID=C7ILP1_9CLOT Length = 137 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 9/142 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPI----PKSTTRIDMALTQGVPSFMQVLG 56 M K +N D+ +++ GH D +++ D P+ +T ++ + LT G+P QVL Sbjct: 1 MLKTACINPDLIGLLAACGHGDKVLIADGNYPLESKTANNTAKMYLGLTHGIPLATQVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 V+ + +E A + P++ L K RY ++ K+ Sbjct: 61 VLGKTIAIEGAEVMVPESGDEPEIFAEFQELLPDGIKLSKLE---RYDFYDVCKKD--NI 115 Query: 117 QAVIRSGECSPYANIILCAGVT 138 + I +GE +ANI++ GV Sbjct: 116 KIAISTGEQRVFANILITVGVV 137 >UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z6_MACCJ Length = 208 Score = 101 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 49/90 (54%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K LNS+IS V+S LGHTDT+V+ D GLP+PK +ID+A+ QG+PSF+ + + + Sbjct: 1 MYKTGTLNSEISKVLSDLGHTDTIVIGDCGLPVPKGVQKIDLAVRQGLPSFIDIATLFMD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQ 90 + +I I H E Sbjct: 61 RFKRRNVLIVGAIAMGLSFFALAWAFHFEA 90 >UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ125_HUMAN Length = 154 Score = 96.5 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 6/139 (4%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTN 60 +L+ ++ ++R+GH D +V+ D P I + A G+P ++ VL ++ Sbjct: 9 ALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVLKLLPL 68 Query: 61 EMQVEAAIIAEEIK--HHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + VE+ E+ L + T E + + G + +F ++ ++ A Sbjct: 69 DTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERAKKAFA 128 Query: 119 VIRSGECSPYANIILCAGV 137 V+ +GE + Y N+IL GV Sbjct: 129 VVATGETALYGNLILRKGV 147 >UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL4_9CLOT Length = 143 Score = 93.1 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 4/142 (2%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPI-PKSTTRIDMALTQGVPSFMQ-VLG 56 M K +++ ++ +++ +GH D + DA P + + A +P+ + VL Sbjct: 1 MLKKISPLISPELLKILAEMGHGDVIAFGDANFPAESSKASYVVRADGIPIPALLDAVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + + V + ++ + + E + + + L KH + +I Y F T + Sbjct: 61 LFPIDTFVTQPVKLMQVVPGDDYVPEVVEEYKKILAKHDVDEDKIEYLERFDFYGHTDTA 120 Query: 117 QAVIRSGECSPYANIILCAGVT 138 V+ +GE + YANI L GV Sbjct: 121 YCVVATGETARYANITLKKGVI 142 >UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organisms RepID=A9KR29_CLOPH Length = 148 Score = 91.9 bits (227), Expect = 6e-18, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 4/137 (2%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT--RIDMALTQGVPSFMQ-VLGVVTNEM 62 +L+ ++ V+ +GH+D +V+ D P + VPS + +L V + Sbjct: 8 ILSPELLKVLCEMGHSDRIVIADGNFPAQSVGKDAIVIRCDGHDVPSLLSAILTVFPLDT 67 Query: 63 QVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNT-IEIRYTTHEQFKQQTAESQAVIR 121 V+ + E + + + + + I F ++ ++ A+I Sbjct: 68 YVDKPALLMEKVPGDTVETPIWEEYKKIVGQFDERGEKAIGSIERFAFYEEAKKAYAIIA 127 Query: 122 SGECSPYANIILCAGVT 138 +GE + YANIIL GV Sbjct: 128 TGEKALYANIILQKGVV 144 >UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette transporter, membrane protein n=2 Tax=Mobiluncus mulieris RepID=C2KRR0_9ACTO Length = 141 Score = 89.6 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 3/134 (2%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQV 64 +L+ ++ V+ +GH D + DA P ST ++ A +P + VL ++ + Sbjct: 8 ILSPELVKVMMEMGHGDEITFGDANYPQNGSTQKVIRADGLLIPDILAGVLELLPLDFYN 67 Query: 65 EAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGE 124 + + + T+ +++ K+ ++ F +Q +SQ + +GE Sbjct: 68 DWQYALMNTVEGD-SRPDVWDTY-DKIVKNAAPQATLKLFERFDFYEQARKSQVTVLTGE 125 Query: 125 CSPYANIILCAGVT 138 + Y NIIL GV Sbjct: 126 TALYGNIILRKGVV 139 >UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUCM_HAEPS Length = 146 Score = 89.2 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 3/141 (2%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K L+ ++ V++ +GH D +V+ DA P + ++ A + + ++ + + Sbjct: 1 MLKGIHPALSPELLKVLAEMGHGDEIVLSDAHFPAHQLHHKVIRADGIQIATLLEAITPL 60 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQ 117 + VE + + H + +L + K G + F + + Sbjct: 61 FEYDQYVERPLAMMQAVHGDSLDLAVEERYLAAIAKINGKAPLVERVERFAFYDRAKIAY 120 Query: 118 AVIRSGECSPYANIILCAGVT 138 AV+ +GE + Y NIIL GVT Sbjct: 121 AVVITGELAKYGNIILKKGVT 141 >UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T7P0_LACRG Length = 145 Score = 85.0 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 59/137 (43%), Gaps = 6/137 (4%) Query: 7 LNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFM-QVLGVVTNEMQVE 65 L+ ++ + +GH D +++ DA P + + A V + +L ++ + + Sbjct: 9 LSPELVKTLMEMGHGDEILLADANYPANTNHDHVIRADGLTVLDLLQDILVLMPLDSYAD 68 Query: 66 AAIIAEEIKHHNPQLHE----TLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIR 121 I +E+ + + + ++ K + + + +F + + + A+++ Sbjct: 69 YQAIVQEVVPGDKHVPNGEPPVWHQYRTEIAKSFSDY-QFKSLERFEFYEHSKQCFAIVQ 127 Query: 122 SGECSPYANIILCAGVT 138 +G+ + Y N+IL GV Sbjct: 128 TGDQALYGNLILKKGVI 144 >UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B7GNK7_BIFLI Length = 148 Score = 83.8 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 4/138 (2%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT--RIDMALTQGVPSFMQ-VLGVVTNEM 62 ++ ++ V+ +GH D LV+ D P + G ++ +L V + Sbjct: 8 IIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAILTVFPLDT 67 Query: 63 QVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIE-IRYTTHEQFKQQTAESQAVIR 121 V+ E + + +++H + I F +Q + VI Sbjct: 68 YVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAKNAYCVIA 127 Query: 122 SGECSPYANIILCAGVTF 139 SGE + YAN+IL GV F Sbjct: 128 SGESAQYANLILQKGVVF 145 >UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria RepID=B1Y3G2_LEPCP Length = 156 Score = 83.1 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 12/150 (8%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLP------IPKSTTRIDMAL-TQGVPSF 51 M K +L D+ V++ +GH D +V+ DA + + + G+ Sbjct: 1 MLKGIDPLLTPDLLKVLAEMGHGDEIVIADANFTAASLAIGANGVRKPVLHVSGAGIGRT 60 Query: 52 MQ-VLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIE--IRYTTHEQ 108 ++ V+ ++ + VE + ++ L + + G+ + Sbjct: 61 VEAVIKLLPLDAAVEQPVAYMQVSDTPAGYRSRLQRDVIAMLADGGHARPEQCQAIERFA 120 Query: 109 FKQQTAESQAVIRSGECSPYANIILCAGVT 138 F + + + A++ +G+ PY N IL GV Sbjct: 121 FYDRVSGAFAIVLTGDLQPYGNFILKKGVI 150 >UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PP4_PSEA6 Length = 144 Score = 82.3 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 10/142 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIP----KSTTRIDMALTQGVPSFMQVLG 56 M K V++ I + R GH +V+ D LP+ ++T + + G+ + VL Sbjct: 1 MLKTAVIHPTILEALGRSGHFAQVVIADGNLPVAAMTGPNSTLVHLNFRPGMLDALSVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + ++ AI+ E+ N ++H L + K + + Sbjct: 61 GILEVCPIQGAIVMEKPPEANAEIHTAYQALLGDVTWEAMERWAFYD------KIRAPAT 114 Query: 117 QAVIRSGECSPYANIILCAGVT 138 +I++GE +AN+IL GV Sbjct: 115 TLIIQTGEQRRFANLILTVGVV 136 >UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7GNN9_BIFLI Length = 145 Score = 81.9 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 6/144 (4%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTR--IDMALTQGVPSFMQ-VL 55 M KG ++ D+ ++S +GH D +V+ DA P R + Q + + VL Sbjct: 1 MLKGIPPIIQPDLLKILSEMGHGDAIVLADAHFPAESVGVRSHVIRYDGQPIEPLLDAVL 60 Query: 56 GVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQ-GNTIEIRYTTHEQFKQQTA 114 ++ + E ++ + + + + + +H+ G I F ++ Sbjct: 61 QLIPLDQYTEHPVLLMDKVPGDTVDTPIWDRYRQVIDRHEPGKQAGIGMLERFAFYEEAG 120 Query: 115 ESQAVIRSGECSPYANIILCAGVT 138 S ++ +GE S YANII+ GV Sbjct: 121 RSYCIVATGEQSQYANIIIRKGVI 144 >UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria RepID=A0B319_BURCH Length = 173 Score = 81.5 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 12/147 (8%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT--------RIDMALTQGVPS 50 M K +L++DI + +GH D + +CDA P R+D A + V Sbjct: 23 MLKNLDPLLHADILHTLRAMGHGDEIAICDANFPAESVAEHTVVGRALRVDGADSARV-- 80 Query: 51 FMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFK 110 VL V+ + V+ E+ + ++ + +G + + F Sbjct: 81 VRAVLSVLPLDTFVDTPAWRMEVVGDAAAVPPVQREVQAEIDRAEGRAVPLTGVERFAFY 140 Query: 111 QQTAESQAVIRSGECSPYANIILCAGV 137 ++ ++ AVI +GE Y I GV Sbjct: 141 ERAQQAYAVIVTGETRGYGCFIFKKGV 167 >UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRI2_9FIRM Length = 136 Score = 80.4 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 60/140 (42%), Gaps = 7/140 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIP--KSTTRIDMALTQGVPSFMQVLGVV 58 M KG +++ ++ ++ GH +++ D P+ S +I + L GVPS ++VL + Sbjct: 1 MLKGKLIHPELIHQLALCGHGSKILIADGNYPLEEKSSGVKIFLGLGPGVPSVIEVLAAI 60 Query: 59 TNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + ++E A + P++ + +RY + ++ + Sbjct: 61 HSVCEIEKAQVMVPEDDREPEIFGE----FRRELPDLELEELVRYDFYAACMEEGV-LKL 115 Query: 119 VIRSGECSPYANIILCAGVT 138 + +GE +ANI+L G Sbjct: 116 AVSTGEQRTFANILLTVGCV 135 >UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5UTT7_ROSS1 Length = 139 Score = 79.2 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 14/144 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPI----PKSTTRIDMALTQGVPSFMQVLG 56 M + +++ I + + GH +++ D P P S R+ + L G+ + VL Sbjct: 1 MLRYKLIHPQILAALGGAGHGSQVLIADGNYPFATGAPASAQRVYLNLAPGLLTVTDVLA 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ--QTA 114 + + + VEAA + P + L L ++ F ++ Sbjct: 61 ALVDAIPVEAAHVMVPDAGPEPSIFTEFRALLPYLS--------LQPLGRFAFYDAARSP 112 Query: 115 ESQAVIRSGECSPYANIILCAGVT 138 ++ VI +GE YANI+L GV Sbjct: 113 DTTLVIATGERRVYANILLTIGVV 136 >UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacteria RepID=B5ZNU4_RHILW Length = 149 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 6/142 (4%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K +L D+ + +GH D +V+ DA P + A + +L Sbjct: 1 MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH 60 Query: 58 VTNEMQV-EAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + + V E A E + +PQ + +++ + I F ++ Sbjct: 61 MPLDTFVPETAWRMEVV--GDPQAVPEVCAEFQKIVSRRAGDFAIVPVERFAFYAMARKA 118 Query: 117 QAVIRSGECSPYANIILCAGVT 138 ++ + E Y N+IL GV Sbjct: 119 AYIVATTEFRLYGNLILKKGVV 140 >UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria RepID=Q12BF4_POLSJ Length = 148 Score = 77.7 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 9/145 (6%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIP-----KSTTRIDMALTQGVPSFMQ 53 M K +L D ++ +GH D + + DA P + +A T Sbjct: 1 MLKNIPPLLTPDALHALASMGHGDDVAIVDANFPAARVAQQSGARLVQLAGTSAPQVLNA 60 Query: 54 VLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 VL ++ + V A ++ + + + L + F ++ Sbjct: 61 VLQLLPLDDFVPDAAWTMQVVGNATAIPAPVAEFASALAQAGER--PAVSLERFDFYERA 118 Query: 114 AESQAVIRSGECSPYANIILCAGVT 138 + ++++GE Y NI+L GV Sbjct: 119 QSAYLILQTGEQRKYGNIVLRKGVI 143 >UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ38_9CLOT Length = 147 Score = 75.7 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 7/138 (5%) Query: 7 LNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRI-DMALTQGVPSFMQ-VLGVVTNE 61 ++ ++ V+ +GH DTLV+ DA P I I + +L ++ + Sbjct: 9 ISPELLKVLHEMGHGDTLVIGDANFPAASIAAEKNHINIRCDGHRATDMLDAILQLMPLD 68 Query: 62 MQVEA-AIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIE-IRYTTHEQFKQQTAESQAV 119 VE I ++++ H + + KH + + + F ++ AV Sbjct: 69 GFVEKPVTIMDKMEMHRDLKCPVWDEFTDIVAKHDERGADAVGFLDRFAFYDAAKDAYAV 128 Query: 120 IRSGECSPYANIILCAGV 137 + + E + YA I++ G Sbjct: 129 VSTSETAFYACIMIQKGC 146 >UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Treponema maltophilum RepID=Q8GBR6_TREMA Length = 128 Score = 75.0 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 1/120 (0%) Query: 20 HTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQVEAAIIAEEIKHHNP 78 H D LV+ DA P R+ A +P+ + +L ++ + V ++ + Sbjct: 1 HGDELVLSDAFYPGDSCNARVLRADGIKIPALLDGILRLINIDPYVNDPLVMMNAAKGDT 60 Query: 79 QLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVT 138 ++ + ++ + I F +++ + A++ SGE Y NII+ GV Sbjct: 61 LDPAVEASYFKAIKNIYPDAPAIARIDRFAFYERSKSAFAIVVSGETVKYGNIIIKKGVV 120 >UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDZ4_KINRD Length = 144 Score = 73.8 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 13/143 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPI----PKSTTRIDMALTQGVPSFMQVLG 56 M +L+ + + ++ GH D +V+ D P+ S + + L G+ + + VL Sbjct: 1 MLTYDLLHPQLLAGLAAAGHGDRVVLADGNFPLRAGTNPSVPVVHLNLRPGLVTVLDVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-- 114 + + VEAA + H+ L + F Q+ Sbjct: 61 PLLGAVPVEAATVMASPDGAPVPAHDDYARLLGERAALSA-------VDRWAFYAQSRAD 113 Query: 115 ESQAVIRSGECSPYANIILCAGV 137 + V+ + + AN+IL GV Sbjct: 114 DVALVVATADQRLCANLILTVGV 136 >UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NM05_9RHOB Length = 124 Score = 72.3 bits (176), Expect = 4e-12, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 1/122 (0%) Query: 18 LGHTDTLVVCDAGLPI-PKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHH 76 +GH D + + DA P + + + +L V+ + V A ++ Sbjct: 1 MGHGDEIAIVDANFPAESSGPDCVRLDGISATDTLKAILSVMPLDTFVPAPARTMQVVGD 60 Query: 77 NPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAG 136 + E + + +I F + + + AV+++GE Y NIIL G Sbjct: 61 PDAVPEIVAEFQTIIDGTADKPAQIETLERHAFYEAASSAFAVVQTGETRLYGNIILTKG 120 Query: 137 VT 138 + Sbjct: 121 II 122 >UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus musculus RepID=Q8R2K1-3 Length = 169 Score = 72.3 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 7/127 (5%) Query: 17 RLGH-TDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQVEAAIIAE 71 R+ H D +V+ DA P I + A +P ++ VL ++ + VE+ Sbjct: 36 RIRHEGDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAVM 95 Query: 72 EIK--HHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYA 129 ++ L + E L + +F ++ ++ AV+ +GE + Y Sbjct: 96 DLVPSDKEKGLQTPIWKRYESLLLEADCKKTLMKLERFEFYERAKKAFAVVATGEMALYG 155 Query: 130 NIILCAG 136 NIIL G Sbjct: 156 NIILKKG 162 >UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z5Q7_STRSW Length = 77 Score = 71.9 bits (175), Expect = 7e-12, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 39/114 (34%) Query: 26 VCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLL 85 VCDAG+P+P + +A GVPSF +VL Sbjct: 3 VCDAGMPVPDGPRLVGLAFRAGVPSFAEVL------------------------------ 32 Query: 86 THLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF 139 + ++ THE K+ A ++ ++ +GE PYAN++L GV F Sbjct: 33 ---------EDRFPDLEPVTHETLKEPAAGARLIVWTGEARPYANVLLRCGVFF 77 >UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhizobium RepID=Q2K1E4_RHIEC Length = 153 Score = 71.5 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 6/138 (4%) Query: 7 LNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPS---FMQVLGVVTN 60 LN DI + +GH D LV+ D P I + T + + +P+ VL V+ Sbjct: 9 LNGDILQALCNMGHGDYLVISDMNFPSDSIARQTRLGRLLTMENIPAPQAIDAVLSVLPL 68 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + ++ ++ E+ ++ + + +G + F ++ VI Sbjct: 69 DTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYDIAKKAYCVI 128 Query: 121 RSGECSPYANIILCAGVT 138 +GE Y +L GV Sbjct: 129 ATGELRFYGCFLLTKGVI 146 >UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae RepID=Q54473_SERMA Length = 138 Score = 71.5 bits (174), Expect = 8e-12, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 13/139 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLP----IPKSTTRIDMALTQGVPSFMQVLG 56 M K + + + + +++ GH +++ D PK T + + L G + +L Sbjct: 1 MIKSAITHPPLLAALAQCGHKTQVLIADGNYACVTHAPKDATVVYLNLAPGTLAAPPILE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + + VE+A + P T + ++ I Y E F Sbjct: 61 KLLACINVESAALM----ACPPDFTN---TIEAEYRQLLPEHCPIEYLPREAFYAAVKSD 113 Query: 117 Q--AVIRSGECSPYANIIL 133 + VI SGE +AN++L Sbjct: 114 RTLLVIASGERRRFANLLL 132 >UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=C6AR62_RHILS Length = 147 Score = 71.1 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 6/140 (4%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLPI------PKSTTRIDMALTQGVPSFMQVLGVV 58 +L D+ ++S +GH D L + D + + M + +L V+ Sbjct: 8 GILCPDLLWILSAMGHGDELAIVDKNFSACRVSKKTVTGKLVSMNAASATDAIAAILAVM 67 Query: 59 TNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + VE ++ E + + +I+ R + A Sbjct: 68 PLDHFVEQPLMHMEDPDQAGTMLPVHADVELLCSTVEMRSIKSRSIERFAYYPLAESCFA 127 Query: 119 VIRSGECSPYANIILCAGVT 138 V+ +GE PY N IL GV Sbjct: 128 VVHTGETRPYGNFILKKGVV 147 >UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC25_9ACTO Length = 138 Score = 71.1 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 17/139 (12%) Query: 8 NSDISSVISRLGHTDTLVVCDAGLPIPKST----TRIDMALTQGVPSFMQVLGVVTNEMQ 63 + ++ GH +++ DA P I + L G+ QVL V+ + Sbjct: 3 HPQFLRALAAAGHGSKILLADANYPHTTGVNPRCELISLNLAPGLLDVSQVLDVLKRTIP 62 Query: 64 VEAAIIAEEIKHHNP---QLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE--SQA 118 +E A I +P +H+ L +E + F + Sbjct: 63 IERAEIMTPAPDADPVEIPIHDEFRAALP--------GVEFGEISRWDFYDAARDENVGI 114 Query: 119 VIRSGECSPYANIILCAGV 137 ++ +GE Y N++L GV Sbjct: 115 IVATGEQRLYGNLLLTVGV 133 >UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacteria RepID=C6AZA9_RHILS Length = 158 Score = 68.8 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 8/127 (6%) Query: 17 RLGHTDTLVVCDAGLPIPKSTTRIDMALTQG-VPSFMQVLGVVTNEMQVEAAIIAEEIK- 74 +GH D + + D P + R+ +P VL V+ + V AI +K Sbjct: 19 AMGHGDEIAIVDGNYPGVEHARRLIRLDGHHLIPVLNAVLSVLPIDDFVAEAIFRSTVKA 78 Query: 75 --HHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANII 132 +HE ++ + + H+ ++ + F + + A+I++GE YANII Sbjct: 79 ERDKLDPVHEEMIDCCARHEPHR----QVVPLIGQDFYGRVKTAHALIQTGEPRLYANII 134 Query: 133 LCAGVTF 139 L GV + Sbjct: 135 LRKGVIY 141 >UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K570_AGRVS Length = 146 Score = 67.7 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 8/146 (5%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLP---IPKST---TRIDMALTQGVPSFM 52 M K VLN+++ + +GH D LV+CD P I K T I+++ + Sbjct: 1 MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA 60 Query: 53 QVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQ 112 +L + + VEA + ++ + +G ++I F + Sbjct: 61 AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAE 120 Query: 113 TAESQAVIRSGECSPYANIILCAGVT 138 S A++R+ + PY I GV Sbjct: 121 AKASFAIVRTSDPGPYGCFIFSKGVV 146 >UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFS0_TOLAT Length = 148 Score = 67.3 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 8/147 (5%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGV--PSFMQ 53 M K +++++ +++ +GH D L V D P I TT + G+ P+ + Sbjct: 1 MLKNIPPFMDAELLWILAAMGHGDELAVVDRNFPARSIANETTSGKLVSLGGMDAPTCIS 60 Query: 54 -VLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQ 112 +L ++ + V + + + L +K + + + Sbjct: 61 GILELMPLDNFVPTPVGWMDPVDQPGTILSVHHDVLAACKKAENAEVGHYVIERFDYYAA 120 Query: 113 TAESQAVIRSGECSPYANIILCAGVTF 139 + AV+++ E PY IL GV F Sbjct: 121 AKKCFAVVQTSENRPYGCFILKKGVVF 147 >UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2R7C7_9PLAN Length = 148 Score = 65.3 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 10/146 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIP----KSTTRIDMALTQGVPSFMQVLG 56 M + T+++ +IS V++ GH +++ D P + T + M L G+ + Q L Sbjct: 1 MLRSTLIHPEISRVLAAAGHHAKILIADGHYPASSKKGPNATVVSMNLMPGLITCDQALQ 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQL---HETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 V + + ++ K L + + L K G +E++ F Sbjct: 61 AVLSAVPIDEINTMNYPKDDPYTLDSDPPVWNEYRQTLAKL-GMNLELKPIDKWDFYDAV 119 Query: 114 AESQAV--IRSGECSPYANIILCAGV 137 A + V I++ + +AN++L GV Sbjct: 120 ATADHVLTIQTADTQRFANLLLSIGV 145 >UniRef50_B3T6P2 Putative RbsD / FucU transport protein family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P2_9ZZZZ Length = 135 Score = 64.6 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 7/128 (5%) Query: 18 LGHTDTLVVCDAGLPIPKSTT-----RIDMALTQGVPSFMQ-VLGVVTNEMQVEAAIIAE 71 +GH D LV+ D P + +P + +L V + V + Sbjct: 1 MGHGDELVLTDCNFPSDSVAAETVTGKFIQMDGLDIPELAKAILSVFPLDSFVSEPVFRM 60 Query: 72 EIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI-RSGECSPYAN 130 E+ +L L + EI F ++ + AV+ +GE PY Sbjct: 61 EVVGKPGELVGCHKDMRNILDETSDRRWEIGSIERHAFYERAKNAYAVVCAAGERRPYGC 120 Query: 131 IILCAGVT 138 I GV Sbjct: 121 FIFIKGVI 128 >UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C446_BEUC1 Length = 136 Score = 64.6 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 9/135 (6%) Query: 4 GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQ 63 +L + + + +GH+D +VV DA P + R+ P ++ L V Sbjct: 6 HPLLTGSLLAALDAMGHSDAVVVADAHFPAARLAARLVELPGTTAPQVVEALCTVLPLDD 65 Query: 64 VEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSG 123 A + + P + + L+T + F A++ V+R+G Sbjct: 66 GPDAAVLMDAPERQP-VQDELVTAAGAPESSG--------IDRFAFYDAAAQAFLVVRTG 116 Query: 124 ECSPYANIILCAGVT 138 E Y N++L G+ Sbjct: 117 ETRAYGNLLLRKGLA 131 >UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019065E7 Length = 157 Score = 62.7 bits (151), Expect = 3e-09, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 6/126 (4%) Query: 19 GHTDTLVVCDAGLPIPKSTTRIDMALTQGV-----PSFMQ-VLGVVTNEMQVEAAIIAEE 72 GH D LV+ D P + + + P + +L V+ + ++ ++ E Sbjct: 25 GHGDYLVISDMNFPSDSIARQTRLGTLLTMENISAPQAIDAILSVLPLDTPIQPSVGRME 84 Query: 73 IKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANII 132 + ++ + + +G + F + ++ VI +GE Y + Sbjct: 85 VIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYEIAKKAYCVIATGELRFYGCFL 144 Query: 133 LCAGVT 138 L GV Sbjct: 145 LTKGVI 150 >UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces RepID=C9YX65_STRSW Length = 145 Score = 61.9 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 15/144 (10%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKS----TTRIDMALTQGVPSFMQVLG 56 M +L+ I ++ GH +++ D P + + + L G+ VL Sbjct: 1 MLLTDLLHPGILEALAGAGHGSRVLLADGHYPASTATGERARIVHLNLAPGLLDVTTVLD 60 Query: 57 VVTNEMQVEAAIIAEEIK-HHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA- 114 V+ + +E+A + K P L + + +F Sbjct: 61 VLLRAIPIESAHVMVPPKGEPEPPAIAEYRDRLA--------PVPVETLGRFEFYDAARY 112 Query: 115 -ESQAVIRSGECSPYANIILCAGV 137 + I + + YAN++L GV Sbjct: 113 SDVALAIVTADTRTYANLLLTIGV 136 >UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN53_9FIRM Length = 147 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 52/148 (35%), Gaps = 13/148 (8%) Query: 1 MKKGTV---LNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQV 54 M K + ++SD+ ++ +GH D L++ D P I + Sbjct: 1 MLK-GIPTRISSDLLKALADMGHGDLLIIADDFYPPITKTPGGVSIQAKGNSAADMIEDI 59 Query: 55 LGVVTN-----EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQF 109 L ++ E VE I ++ + + ++ + K+ + +F Sbjct: 60 LKLMPLDVDYCEYPVEYMI-PDKDSGISMDRPKVWDDAIDAVVKNGYAPKIVGEIERSKF 118 Query: 110 KQQTAESQAVIRSGECSPYANIILCAGV 137 ++ + + + E PY IL GV Sbjct: 119 YEKAGRAYVTVCTSERQPYGCFILQKGV 146 >UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HT9_BRAJA Length = 147 Score = 57.3 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 10/147 (6%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGV---PSFM 52 M K +L D+ +++ +GH D LV DA P I K+T+ + G+ + Sbjct: 1 MLKSIDPILTPDLLWLLASMGHGDDLVFVDANHPATRIAKTTSSQRLIQLPGMRMETAAR 60 Query: 53 QVLGVV-TNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ 111 ++ V ++ + + + + ++ + L ++++ G T+ F + Sbjct: 61 AIMSVYPLDDFDPDPVRVMMPVDDPD-RVPDVQRAVLAEIERAAGRTVAPGKLARPDFYR 119 Query: 112 QTAESQAVIRSGECSPYANIILCAGVT 138 A V++ G+ Y ++ GV Sbjct: 120 AAAAGFGVVQVGDSRGYGCFLIRKGVI 146 >UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F10 gene n=1 Tax=Monodelphis domestica RepID=UPI0000F2AEE0 Length = 172 Score = 56.5 bits (135), Expect = 2e-07, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 8/97 (8%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTN 60 ++L+ ++ ++++GH D +V+ DA P I + A VP ++ +L ++ Sbjct: 9 SLLSPELLFALAKMGHGDEIVLADANFPTSSICRCGPVEIRADGLSVPQLLESILKLLPL 68 Query: 61 EMQVEAAIIAEEIKHHN----PQLHETLLTHLEQLQK 93 + +++ ++ + Q E T L + Sbjct: 69 DTYEPNSVMVMDVVESDKAKGLQTPEVWQTFRSLLSQ 105 >UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0M9_CHRSD Length = 144 Score = 55.3 bits (132), Expect = 5e-07, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 6/122 (4%) Query: 23 TLVVCDAGLP----IPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNP 78 ++V DA P P + +R+ + L +G+ V+ V+ + VEA + Sbjct: 23 KILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVSQSVAVEAITFMATAEGKAS 82 Query: 79 QLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ--QTAESQAVIRSGECSPYANIILCAG 136 + L + G TI F + + +I +GE PY+N +L G Sbjct: 83 ETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTIG 142 Query: 137 VT 138 V Sbjct: 143 VP 144 >UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X7_9BURK Length = 145 Score = 51.5 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 8/145 (5%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSF-MQV 54 M K +L ++ +S +GH + + V DA + K + + + V Sbjct: 1 MLKGLDPLLTPELLMHLSAMGHGEWVAVVDANFTADFLGKGKALVRLP-GHSLERVSKAV 59 Query: 55 LGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTI-EIRYTTHEQFKQQT 113 L V V ++ + + + L G + F ++ Sbjct: 60 LSVFPLAEDVACPAAYMQVCNSPEGHRTAAQSSVVDLLGRDGLPANRVEAVERFAFYEKI 119 Query: 114 AESQAVIRSGECSPYANIILCAGVT 138 + +++SGE + Y N + C GV Sbjct: 120 KGASVIVQSGEATAYGNAMFCKGVI 144 >UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteriaceae RepID=C8T2D3_KLEPR Length = 129 Score = 48.4 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K +++ ++ V++ +GH D ++ DA P ++ A V +Q ++ + Sbjct: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL 60 Query: 58 VTNEMQVEAAIIAEEI 73 + ++ + Sbjct: 61 FELDSYAPPVVMMAAV 76 >UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 Tax=cellular organisms RepID=UPI0001903CC7 Length = 79 Score = 38.8 bits (89), Expect = 0.051, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 18/32 (56%) Query: 108 QFKQQTAESQAVIRSGECSPYANIILCAGVTF 139 F + + A+I++ E YANII+ GV + Sbjct: 34 DFYGRVRAAHALIQTSEPRLYANIIMRKGVIY 65 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_E... 171 7e-42 UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_... 168 4e-41 UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria Rep... 163 1e-39 UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_... 162 3e-39 UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN 161 9e-39 UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD... 157 1e-37 UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD... 154 8e-37 UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organis... 154 1e-36 UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria R... 152 4e-36 UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (cla... 151 4e-36 UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostri... 151 5e-36 UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID... 151 6e-36 UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B... 151 7e-36 UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ12... 149 3e-35 UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUC... 148 5e-35 UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=R... 148 6e-35 UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=R... 147 1e-34 UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rham... 146 2e-34 UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mits... 146 2e-34 UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostri... 146 2e-34 UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7... 145 4e-34 UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 ... 145 4e-34 UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae T... 145 4e-34 UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_P... 144 6e-34 UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD 143 1e-33 UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria Re... 142 3e-33 UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis... 142 3e-33 UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhi... 141 5e-33 UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacte... 141 7e-33 UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD... 141 8e-33 UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostri... 140 1e-32 UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette tran... 140 1e-32 UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus ... 140 2e-32 UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 ... 139 3e-32 UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobac... 138 7e-32 UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM 136 2e-31 UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium legumin... 136 2e-31 UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID... 136 2e-31 UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 ... 135 4e-31 UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxi... 134 7e-31 UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Lab... 134 9e-31 UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria Re... 134 1e-30 UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (clas... 132 4e-30 UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostri... 131 1e-29 UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 ... 129 3e-29 UniRef50_B3T6P2 Putative RbsD / FucU transport protein family pr... 127 1e-28 UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 126 3e-28 UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum... 124 1e-27 UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B... 123 1e-27 UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas... 123 3e-27 UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales Rep... 122 3e-27 UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus ... 122 4e-27 UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5... 121 7e-27 UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Trepone... 121 8e-27 UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary comp... 118 6e-26 UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostri... 117 1e-25 UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinom... 115 4e-25 UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radio... 114 8e-25 UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales Rep... 114 1e-24 UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2... 114 1e-24 UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verruc... 113 2e-24 UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curviba... 113 2e-24 UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacte... 112 4e-24 UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia... 109 3e-23 UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cave... 109 3e-23 UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces... 107 1e-22 UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae Re... 104 9e-22 UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter ... 98 1e-19 UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_... 94 1e-18 UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F... 94 1e-18 UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 ... 90 3e-17 UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macroco... 89 4e-17 UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteri... 88 6e-17 UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=... 78 7e-14 Sequences not found previously or not previously below threshold: UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 ... 55 9e-07 UniRef50_B2UPT8 Putative uncharacterized protein n=1 Tax=Akkerma... 39 0.033 >UniRef50_B5YY06 D-ribose pyranase n=72 Tax=Bacteria RepID=RBSD_ECO5E Length = 139 Score = 171 bits (433), Expect = 7e-42, Method: Composition-based stats. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN Sbjct: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI Sbjct: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 Query: 121 RSGECSPYANIILCAGVTF 139 RSGECSPYANIILCAGVTF Sbjct: 121 RSGECSPYANIILCAGVTF 139 >UniRef50_A5F1C1 D-ribose pyranase n=292 Tax=Bacteria RepID=RBSD_VIBC3 Length = 139 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 72/139 (51%), Positives = 103/139 (74%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK T+LNS++S +++ LGHTD + +CDAGLPIP TRID+ALT GVPSF++ + V+ + Sbjct: 1 MKKSTLLNSELSYLVATLGHTDEITICDAGLPIPDEVTRIDLALTHGVPSFLETVRVILS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E Q+E+ I+A+E +P LHE L L+ ++ G I I+Y +HE FKQ+T +S+AV+ Sbjct: 61 ESQIESVIVAQEFAQVSPVLHEALYRELKAEEQLCGKPIAIQYISHEAFKQRTLQSRAVV 120 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC+PYAN+I AGV F Sbjct: 121 RTGECTPYANVIFQAGVVF 139 >UniRef50_B1I9X5 Fucose operon FucU protein n=25 Tax=Bacteria RepID=B1I9X5_STRPI Length = 146 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 4/141 (2%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K ++ D+ + +GH D +V+ DA P ++ +P + +L + Sbjct: 1 MLKHIPKNISPDLLKTLMEMGHGDEIVLADANYPSASCANKLIRCDGVNIPELLDSILYL 60 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQ 117 + + V+++I + + + + T+ + ++ H + I Y E F +++ ++ Sbjct: 61 MPLDSYVDSSIQFMNVVSGD-DIPKIWGTYRQMIEGHGTDLKTITYLRREDFYERSKKAY 119 Query: 118 AVIRSGECSPYANIILCAGVT 138 A++ +GE S YANIIL GV Sbjct: 120 AIVATGETSLYANIILKKGVV 140 >UniRef50_A4IT64 D-ribose pyranase n=9 Tax=Firmicutes RepID=RBSD_GEOTN Length = 132 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 64/139 (46%), Positives = 97/139 (69%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +++++++ LGHTDT+V+ D GLPIP RID+AL +G P F+ VL V N Sbjct: 1 MKKNGILNKELNTLLASLGHTDTIVIADCGLPIPNEEARIDLALVKGFPPFLSVLDAVIN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++AEEIK NP ++E++ K + + + I++ HE+FK+ T +++AVI Sbjct: 61 ELVVEEIVLAEEIKTQNPDVYESI--------KARMSDVPIQFVRHEEFKEMTKQAKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL +GV F Sbjct: 113 RTGEATPYANIILRSGVNF 131 >UniRef50_A7GLA2 D-ribose pyranase n=3 Tax=Bacteria RepID=RBSD_BACCN Length = 131 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 96/139 (69%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VLNS+I+++++ LGHTDT+V+ D GLPIP S RID+A+ G PSF+ VL VV Sbjct: 1 MKKHGVLNSEIAAILAALGHTDTIVIADCGLPIPDSVKRIDLAVELGKPSFLDVLQVVIE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 +M +E +AEEI +N ++++ + T L++ Y HE+FK++T +++A+I Sbjct: 61 DMAIEKVTVAEEITTNNREIYKEIETRLKE--------ANFEYVLHEEFKEKTKQAKAII 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL AGV F Sbjct: 113 RTGEATPYANIILHAGVIF 131 >UniRef50_Q65E56 D-ribose pyranase n=11 Tax=Bacillales RepID=RBSD_BACLD Length = 131 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS I+ +++ LGHTDT+V+ DAGLP+P +ID+ALT G P F +V ++ + Sbjct: 1 MKKHGILNSHIAKLLADLGHTDTIVIADAGLPVPPGVPKIDLALTLGTPGFREVTKLIAD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EM VE A+EI+ NP K + + +I Y HE FK+ T++++AVI Sbjct: 61 EMVVEKVTAAQEIESVNPG--------QAAFLKAEFSNQKIDYIPHEAFKKATSQAKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN IL AGV F Sbjct: 113 RTGEATPYANCILHAGVIF 131 >UniRef50_A0Q217 D-ribose pyranase n=80 Tax=Firmicutes RepID=RBSD_CLONN Length = 131 Score = 154 bits (390), Expect = 8e-37, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 91/139 (65%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS I V+S++GHTD + + D+GLPIP T RID+AL +GVP+FMQ L V Sbjct: 1 MKKTPLLNSSICEVVSKMGHTDMIAIGDSGLPIPDDTKRIDLALIKGVPTFMQTLKAVLL 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E QVE IIA E K +P+ E + K + ++I + +HE+ K++ + +AVI Sbjct: 61 EQQVEEVIIAHETKEVSPETFENI--------KKEIGDVKITFISHEELKKELSNCKAVI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYANIIL +GV F Sbjct: 113 RTGEQTPYANIILKSGVVF 131 >UniRef50_A9KR29 RbsD or FucU transport n=13 Tax=cellular organisms RepID=A9KR29_CLOPH Length = 148 Score = 154 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 4/138 (2%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT--RIDMALTQGVPSFM-QVLGVVTNE 61 +L+ ++ V+ +GH+D +V+ D P + VPS + +L V + Sbjct: 7 KILSPELLKVLCEMGHSDRIVIADGNFPAQSVGKDAIVIRCDGHDVPSLLSAILTVFPLD 66 Query: 62 MQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNT-IEIRYTTHEQFKQQTAESQAVI 120 V+ + E + + + + + I F ++ ++ A+I Sbjct: 67 TYVDKPALLMEKVPGDTVETPIWEEYKKIVGQFDERGEKAIGSIERFAFYEEAKKAYAII 126 Query: 121 RSGECSPYANIILCAGVT 138 +GE + YANIIL GV Sbjct: 127 ATGEKALYANIILQKGVV 144 >UniRef50_A0B319 RbsD or FucU transport n=85 Tax=Proteobacteria RepID=A0B319_BURCH Length = 173 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 12/147 (8%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT--------RIDMALTQGVPS 50 M K +L++DI + +GH D + +CDA P R+D A + V Sbjct: 23 MLKNLDPLLHADILHTLRAMGHGDEIAICDANFPAESVAEHTVVGRALRVDGADSARV-- 80 Query: 51 FMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFK 110 VL V+ + V+ E+ + ++ + +G + + F Sbjct: 81 VRAVLSVLPLDTFVDTPAWRMEVVGDAAAVPPVQREVQAEIDRAEGRAVPLTGVERFAFY 140 Query: 111 QQTAESQAVIRSGECSPYANIILCAGV 137 ++ ++ AVI +GE Y I GV Sbjct: 141 ERAQQAYAVIVTGETRGYGCFIFKKGV 167 >UniRef50_B1VU78 D-ribose pyranase 2 n=10 Tax=Actinobacteria (class) RepID=RBSD2_STRGG Length = 129 Score = 151 bits (383), Expect = 4e-36, Method: Composition-based stats. Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN ++ I+ LGH DT++VCDAG+PIP ID+A G PSF +VL + + Sbjct: 1 MKKSGILNRHLAGAIAELGHGDTVLVCDAGMPIPPGPRVIDLAFRAGTPSFAEVLDGLLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE A AEEI+ NP L H L H++ K +TA ++ V+ Sbjct: 61 ELVVEGATAAEEIRDANPDAAALLDVHFPWL----------EAVPHDELKARTAAARLVV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE PYAN++L GV F Sbjct: 111 RTGEARPYANVLLRCGVFF 129 >UniRef50_A7VPL4 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VPL4_9CLOT Length = 143 Score = 151 bits (383), Expect = 5e-36, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 4/142 (2%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKS-TTRIDMALTQGVPSFMQ-VLG 56 M K +++ ++ +++ +GH D + DA P S + + A +P+ + VL Sbjct: 1 MLKKISPLISPELLKILAEMGHGDVIAFGDANFPAESSKASYVVRADGIPIPALLDAVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + + V + ++ + + E + + + L KH + +I Y F T + Sbjct: 61 LFPIDTFVTQPVKLMQVVPGDDYVPEVVEEYKKILAKHDVDEDKIEYLERFDFYGHTDTA 120 Query: 117 QAVIRSGECSPYANIILCAGVT 138 V+ +GE + YANI L GV Sbjct: 121 YCVVATGETARYANITLKKGVI 142 >UniRef50_C1BNJ8 FucU homolog n=2 Tax=Caligus rogercresseyi RepID=C1BNJ8_9MAXI Length = 152 Score = 151 bits (382), Expect = 6e-36, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 7/140 (5%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTNE 61 +++ D+ ++++GH D +V+ D+ P + K ++ A +P +Q +L + + Sbjct: 10 IISPDLLYTLAQMGHGDEIVLADSNFPSFSVSKCGAKLVDASGHSIPDLLQAILPLFPLD 69 Query: 62 MQVEAAIIAEEIKHHNPQL---HETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 V I E+ + + + + T+ + L +G I + +F ++ S A Sbjct: 70 HYVFNPAIVMELVNADKKKNLKIDIWSTYEKILADSEGRDIPMLEVERFEFYERAKRSYA 129 Query: 119 VIRSGECSPYANIILCAGVT 138 V+ +GE S Y NIIL GV Sbjct: 130 VVSTGETSIYGNIILKKGVI 149 >UniRef50_B7GNK7 RbsD or FucU transport n=26 Tax=Bacteria RepID=B7GNK7_BIFLI Length = 148 Score = 151 bits (382), Expect = 7e-36, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 6/145 (4%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT--RIDMALTQGVPSFM-QVL 55 M KG ++ ++ V+ +GH D LV+ D P + G + +L Sbjct: 1 MLKGIPKIIPPELLKVLCEMGHGDQLVIADGNFPAESIGKNAIVVRMDGHGGGEILKAIL 60 Query: 56 GVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTI-EIRYTTHEQFKQQTA 114 V + V+ E + + +++H I F +Q Sbjct: 61 TVFPLDTYVDKPATLMEKVPGDTVATPIWDVYAGLIKEHDERGADAIGSLERFAFYEQAK 120 Query: 115 ESQAVIRSGECSPYANIILCAGVTF 139 + VI SGE + YAN+IL GV F Sbjct: 121 NAYCVIASGESAQYANLILQKGVVF 145 >UniRef50_A2VDF0 Protein fucU homolog n=34 Tax=Metazoa RepID=CJ125_HUMAN Length = 154 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 6/139 (4%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLPIPK---STTRIDMALTQGVPSFMQ-VLGVVTN 60 +L+ ++ ++R+GH D +V+ D P A G+P ++ VL ++ Sbjct: 9 ALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVLKLLPL 68 Query: 61 EMQVEAAIIAEEIKHHNPQ--LHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + VE+ E+ + + L + T E + + G + +F ++ ++ A Sbjct: 69 DTYVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERAKKAFA 128 Query: 119 VIRSGECSPYANIILCAGV 137 V+ +GE + Y N+IL GV Sbjct: 129 VVATGETALYGNLILRKGV 147 >UniRef50_B8F6Y2 L-fucose mutarotase n=150 Tax=Bacteria RepID=FUCM_HAEPS Length = 146 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 3/141 (2%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K L+ ++ V++ +GH D +V+ DA P + ++ A + + ++ + + Sbjct: 1 MLKGIHPALSPELLKVLAEMGHGDEIVLSDAHFPAHQLHHKVIRADGIQIATLLEAITPL 60 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQ 117 + VE + + H + +L + K G + F + + Sbjct: 61 FEYDQYVERPLAMMQAVHGDSLDLAVEERYLAAIAKINGKAPLVERVERFAFYDRAKIAY 120 Query: 118 AVIRSGECSPYANIILCAGVT 138 AV+ +GE + Y NIIL GVT Sbjct: 121 AVVITGELAKYGNIILKKGVT 141 >UniRef50_C3JZP4 D-ribose pyranase n=3 Tax=Proteobacteria RepID=RBSD_PSEFS Length = 134 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 63/139 (45%), Positives = 87/139 (62%), Gaps = 5/139 (3%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +S VI+ LGH D LV+ DAGLP+P ID+ALTQG+P F+ L +V + Sbjct: 1 MKKTPLLNIALSRVIASLGHGDILVIGDAGLPVPPGVELIDLALTQGIPDFISALRIVLS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVE+ ++AEEI P L T ++ + +HE FKQ + +++AV+ Sbjct: 61 EMQVESHVLAEEILLKQPPALNELNTLSDEAALGERR-----LVSHEAFKQLSRKARAVV 115 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC PY NI L +GVTF Sbjct: 116 RTGECQPYCNIALVSGVTF 134 >UniRef50_A5INL8 D-ribose pyranase n=8 Tax=Thermotogaceae RepID=RBSD_THEP1 Length = 135 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 4/139 (2%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LNS IS +++ +GHTD L + D G PIP ++D+ + +G P ++V+ V+ Sbjct: 1 MKRVGILNSTISEMVANMGHTDMLAIVDMGFPIPDGAKKVDLVVDKGKPGLLEVVEVILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E++VE I+AEE+ NP+ L L + ++I + HE+FK+ + S+ + Sbjct: 61 ELEVEKIILAEEMNEKNPET----RDLLINLVGKNNSNVKIEFVPHEEFKKISRTSKGFV 116 Query: 121 RSGECSPYANIILCAGVTF 139 R+G PY+N+IL +GV F Sbjct: 117 RTGADRPYSNVILVSGVIF 135 >UniRef50_C7T7P0 Fucose operon protein n=2 Tax=Lactobacillus rhamnosus RepID=C7T7P0_LACRG Length = 145 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 61/145 (42%), Gaps = 8/145 (5%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFM-QVLGV 57 M K L+ ++ + +GH D +++ DA P + + A V + +L + Sbjct: 1 MLKNIPKRLSPELVKTLMEMGHGDEILLADANYPANTNHDHVIRADGLTVLDLLQDILVL 60 Query: 58 VTNEMQVEAAIIAEEIKHHNPQL----HETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 + + + I +E+ + + + ++ K + + + +F + + Sbjct: 61 MPLDSYADYQAIVQEVVPGDKHVPNGEPPVWHQYRTEIAKSFSDY-QFKSLERFEFYEHS 119 Query: 114 AESQAVIRSGECSPYANIILCAGVT 138 + A++++G+ + Y N+IL GV Sbjct: 120 KQCFAIVQTGDQALYGNLILKKGVI 144 >UniRef50_C9KQ30 Ribose ABC transporter protein RbsD n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ30_9FIRM Length = 131 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 8/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VL++++S I+ LGH D ++ DAG+PIP ID+A+T GVP+F QVL V Sbjct: 1 MKKHGVLHAELSRCIAALGHKDLFMIGDAGMPIPPGVEIIDLAVTAGVPTFRQVLDAVLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E +VE +A+EI+ HN H L L + Y H++ K +A+++ I Sbjct: 61 EAEVEGYYLADEIRTHNEPQHAYLQQKL--------KGVPAEYMPHDELKTFSAKAKFAI 112 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE SPY N+IL AGV F Sbjct: 113 RTGEFSPYPNVILRAGVVF 131 >UniRef50_A8S316 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S316_9CLOT Length = 132 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K +L+ ++ V++ L H DT+++ DAGLPIPK R+D+ G P+++ VL + Sbjct: 1 MLKTGILHPQLARVLAELRHKDTIIIGDAGLPIPKGVERVDLGWRPGDPAYLDVLEEILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + VE A+ A+E P H+ L L Q + + Y H + K+++ +++A++ Sbjct: 61 YIVVEGAVFADEALTVTPDFHKKALDLLPQ-------GLPVEYIPHTELKERSKDAKAIV 113 Query: 121 RSGECSPYANIILCAGVTF 139 +GE + Y N+IL AG + Sbjct: 114 LTGEFTGYTNVILSAGCAY 132 >UniRef50_B7GNN9 RbsD or FucU transport n=7 Tax=Bacteria RepID=B7GNN9_BIFLI Length = 145 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 6/144 (4%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTR--IDMALTQGVPSFMQ-VL 55 M KG ++ D+ ++S +GH D +V+ DA P R + Q + + VL Sbjct: 1 MLKGIPPIIQPDLLKILSEMGHGDAIVLADAHFPAESVGVRSHVIRYDGQPIEPLLDAVL 60 Query: 56 GVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQ-GNTIEIRYTTHEQFKQQTA 114 ++ + E ++ + + + + + +H+ G I F ++ Sbjct: 61 QLIPLDQYTEHPVLLMDKVPGDTVDTPIWDRYRQVIDRHEPGKQAGIGMLERFAFYEEAG 120 Query: 115 ESQAVIRSGECSPYANIILCAGVT 138 S ++ +GE S YANII+ GV Sbjct: 121 RSYCIVATGEQSQYANIIIRKGVI 144 >UniRef50_B4U1H5 High affinity ribose transport protein RbsD n=3 Tax=Lactobacillales RepID=B4U1H5_STREM Length = 135 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 7/138 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNSD++ + + LGHTD + + D GLP+P +ID+AL +G+PSF VLG+ Sbjct: 4 MKKHGILNSDVAKLAADLGHTDRVCIGDLGLPVPVGVPKIDLALKRGLPSFQDVLGMYLE 63 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + +E I+AEEIK NP +LT L+ +T+ + Y +HE+ K +AVI Sbjct: 64 HVVIEKVILAEEIKTANPDQLAAILTQLD-------DTVAVEYVSHEELKALNKSVKAVI 116 Query: 121 RSGECSPYANIILCAGVT 138 R+GE +PY+NIIL +GVT Sbjct: 117 RTGEDTPYSNIILQSGVT 134 >UniRef50_A8F3M5 D-ribose pyranase n=1 Tax=Thermotoga lettingae TMO RepID=RBSD_THELT Length = 140 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 86/139 (61%), Gaps = 7/139 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN ++S +I+ +GH D L + D+G PI + +D++L G P ++++ + Sbjct: 1 MKKNGILNRELSYLIASMGHGDILSIVDSGFPISEDVFCVDLSLIAGKPKIVEIIIPLLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+++E +IAEEIK +P+ H+ LL+ ++I Y HE+FK + ES+ V+ Sbjct: 61 ELEIEKVLIAEEIKMISPKYHQKLLSIFP-------KNVQIEYIPHEKFKDRVRESKGVV 113 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + Y+++IL GVT+ Sbjct: 114 RTGEQTSYSSVILVGGVTY 132 >UniRef50_Q4KEW9 D-ribose pyranase n=18 Tax=Bacteria RepID=RBSD_PSEF5 Length = 134 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 62/139 (44%), Positives = 83/139 (59%), Gaps = 5/139 (3%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN +S +I+ LGH D +V+ DAGLP+P ID+ALT GVP F+ L V+ + Sbjct: 1 MKKTPLLNIALSRLIASLGHGDIVVIGDAGLPVPPGVELIDLALTHGVPDFLTTLKVLLS 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EMQVE ++AEEI P L + G + + HE FK + +++AVI Sbjct: 61 EMQVERHVLAEEILLKQPTPLAAL-----EGMTAGGELGQRQLMNHEDFKVLSRQARAVI 115 Query: 121 RSGECSPYANIILCAGVTF 139 R+GEC PY NI L AGVTF Sbjct: 116 RTGECQPYCNIALIAGVTF 134 >UniRef50_D2BEN5 RbsD n=5 Tax=Actinomycetales RepID=D2BEN5_STRRD Length = 129 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN+ +S ++RLGHTD L+VCD+G+P+P +D+A G+P+F VL + Sbjct: 1 MKRAGILNAALSGGLARLGHTDELLVCDSGMPLPPGVEVVDLAFLPGIPAFADVLDGILA 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE A A E++ N + L L L Y H + K+ + S+ ++ Sbjct: 61 ELVVEGATAAREVRTANAECDALLAARLPGL----------TYIPHSELKRLSRSSRLIV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE PYAN++L GV F Sbjct: 111 RTGEARPYANVLLRCGVAF 129 >UniRef50_Q12BF4 RbsD or FucU transport n=6 Tax=Proteobacteria RepID=Q12BF4_POLSJ Length = 148 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 9/145 (6%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIP-----KSTTRIDMALTQGVPSFMQ 53 M K +L D ++ +GH D + + DA P + +A T Sbjct: 1 MLKNIPPLLTPDALHALASMGHGDDVAIVDANFPAARVAQQSGARLVQLAGTSAPQVLNA 60 Query: 54 VLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 VL ++ + V A ++ + + + L + F ++ Sbjct: 61 VLQLLPLDDFVPDAAWTMQVVGNATAIPAPVAEFASALAQAGERPA--VSLERFDFYERA 118 Query: 114 AESQAVIRSGECSPYANIILCAGVT 138 + ++++GE Y NI+L GV Sbjct: 119 QSAYLILQTGEQRKYGNIVLRKGVI 143 >UniRef50_C4LFS0 RbsD or FucU transport n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LFS0_TOLAT Length = 148 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 8/147 (5%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPI------PKSTTRIDMALTQGVPSFM 52 M K +++++ +++ +GH D L V D P S + + Sbjct: 1 MLKNIPPFMDAELLWILAAMGHGDELAVVDRNFPARSIANETTSGKLVSLGGMDAPTCIS 60 Query: 53 QVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQ 112 +L ++ + V + + + L +K + + + Sbjct: 61 GILELMPLDNFVPTPVGWMDPVDQPGTILSVHHDVLAACKKAENAEVGHYVIERFDYYAA 120 Query: 113 TAESQAVIRSGECSPYANIILCAGVTF 139 + AV+++ E PY IL GV F Sbjct: 121 AKKCFAVVQTSENRPYGCFILKKGVVF 147 >UniRef50_Q2K1E4 Fucose dissimilation pathway protein n=5 Tax=Rhizobium RepID=Q2K1E4_RHIEC Length = 153 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 10/147 (6%) Query: 1 MKKGTV---LNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPS---F 51 M K + LN DI + +GH D LV+ D P I + T + + +P+ Sbjct: 1 MLK-GIRAELNGDILQALCNMGHGDYLVISDMNFPSDSIARQTRLGRLLTMENIPAPQAI 59 Query: 52 MQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ 111 VL V+ + ++ ++ E+ ++ + + +G + F Sbjct: 60 DAVLSVLPLDTPIQPSVGRMEVIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYD 119 Query: 112 QTAESQAVIRSGECSPYANIILCAGVT 138 ++ VI +GE Y +L GV Sbjct: 120 IAKKAYCVIATGELRFYGCFLLTKGVI 146 >UniRef50_B5ZNU4 RbsD or FucU transport n=10 Tax=Alphaproteobacteria RepID=B5ZNU4_RHILW Length = 149 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 4/141 (2%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K +L D+ + +GH D +V+ DA P + A + +L Sbjct: 1 MLKGIHPLLGPDLLHALKTMGHGDDIVIADANFPSGSMGPPVIRADGVSATDMAEAILAH 60 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQ 117 + + V E+ + E + + + G+ I F ++ Sbjct: 61 MPLDTFVPETAWRMEVVGDPQAVPEVCAEFQKIVSRRAGD-FAIVPVERFAFYAMARKAA 119 Query: 118 AVIRSGECSPYANIILCAGVT 138 ++ + E Y N+IL GV Sbjct: 120 YIVATTEFRLYGNLILKKGVV 140 >UniRef50_Q02XM8 D-ribose pyranase n=23 Tax=Firmicutes RepID=RBSD_LACLS Length = 132 Score = 141 bits (355), Expect = 8e-33, Method: Composition-based stats. Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 7/138 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LNS+++ + LGHTD + + D GLP+P +ID+ALT+G P+F +VL + Sbjct: 1 MKKEVILNSELAKIADDLGHTDQVCIGDLGLPVPSGVKKIDLALTRGKPTFQEVLDIYLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + VE +A+EIK +NP+ + LLT L +E+ + +HE K + +AV+ Sbjct: 61 NILVEKIYLADEIKENNPEQLKILLTKLSA-------DVEVVFVSHETLKLMNHDVKAVV 113 Query: 121 RSGECSPYANIILCAGVT 138 R+GE +PY+NIIL +GV Sbjct: 114 RTGENTPYSNIILQSGVA 131 >UniRef50_B0NEL3 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEL3_EUBSP Length = 153 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M + +L D+ + +GH D LV+ DAG P + R+ + +P ++ +L Sbjct: 11 MLRNIPKILPPDLVKYMMEMGHADYLVIADAGFPGTAHSKRMIRMDSAEIPELLEAILPF 70 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTI--EIRYTTHEQFKQQTAE 115 + V+ + + + P++ T+ E L+K+ + + +Y F ++ + Sbjct: 71 FPLDYFVDYPVRLMQKLDYEPEVM-IWKTYEELLKKYDKDHAFKQFKYLDRLDFYKEAED 129 Query: 116 SQAVIRSGECSPYANIILCAGV 137 + VI++G+ S Y NIIL GV Sbjct: 130 AYVVIQTGDTSRYGNIILQKGV 151 >UniRef50_C2KRR0 Ribose ABC superfamily ATP binding cassette transporter, membrane protein n=2 Tax=Mobiluncus mulieris RepID=C2KRR0_9ACTO Length = 141 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 3/134 (2%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQV 64 +L+ ++ V+ +GH D + DA P ST ++ A +P + VL ++ + Sbjct: 8 ILSPELVKVMMEMGHGDEITFGDANYPQNGSTQKVIRADGLLIPDILAGVLELLPLDFYN 67 Query: 65 EAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGE 124 + + + T+ +++ K+ ++ F +Q +SQ + +GE Sbjct: 68 DWQYALMNTVEGDS-RPDVWDTY-DKIVKNAAPQATLKLFERFDFYEQARKSQVTVLTGE 125 Query: 125 CSPYANIILCAGVT 138 + Y NIIL GV Sbjct: 126 TALYGNIILRKGVV 139 >UniRef50_C8WRM8 RbsD or FucU transport n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRM8_ALIAD Length = 131 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 9/139 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +L+ +S +I+ LGH + + V D GLPIP +D+A+ G+PSF+ V + Sbjct: 1 MKRSGILHGRLSQIIAELGHGELIAVADCGLPIPPGIELVDLAIKPGMPSFLDVCDTILT 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE I+A E+ + + L L K + H FKQ ++V+ Sbjct: 61 ELVVEDFIVANELAIRGSGVVDHLRERAGVLGK---------FIPHSDFKQTLRNVRSVV 111 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN+I AGV F Sbjct: 112 RTGEWTPYANVIFVAGVAF 130 >UniRef50_C5VEK7 High affinity ribose transport protein RbsD n=2 Tax=Corynebacterium matruchotii RepID=C5VEK7_9CORY Length = 125 Score = 139 bits (350), Expect = 3e-32, Method: Composition-based stats. Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 14/139 (10%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN ++ I+RLGHTDT +CD GLP+P ID+ L GVPSF QV + Sbjct: 1 MKRDGLLNPQLNQAIARLGHTDTFAICDCGLPLPPQARIIDLTLIHGVPSFEQVAEAILK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ +E IA + + I HE FK+Q + V+ Sbjct: 61 EVVIEKVTIATQTPDV--------------IINTLPADAPITKIDHEDFKKQINDCTFVV 106 Query: 121 RSGECSPYANIILCAGVTF 139 R+G +PYAN I GV+F Sbjct: 107 RTGSTTPYANAIYYCGVSF 125 >UniRef50_B9K570 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K570_AGRVS Length = 146 Score = 138 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 8/146 (5%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTT------RIDMALTQGVPSFM 52 M K VLN+++ + +GH D LV+CD P I+++ + Sbjct: 1 MLKGIDPVLNAELLHALMLMGHGDQLVLCDINHPAETIAKHTTYGKLINLSGCGLEVATA 60 Query: 53 QVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQ 112 +L + + VEA + ++ + +G ++I F + Sbjct: 61 AILTLFPLDTFVEAPVKRMQVVGDPGGQVPIFSAIQRVVDNAEGRPVKIDALERFAFYAE 120 Query: 113 TAESQAVIRSGECSPYANIILCAGVT 138 S A++R+ + PY I GV Sbjct: 121 AKASFAIVRTSDPGPYGCFIFSKGVV 146 >UniRef50_A4J7I2 D-ribose pyranase n=5 Tax=Bacteria RepID=RBSD_DESRM Length = 130 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 54/139 (38%), Positives = 86/139 (61%), Gaps = 9/139 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VL+ D++++I+ LGH D +VV D+GLP+P ID+A+T+G+P + VL V+ Sbjct: 1 MKKQGVLHRDLAALIASLGHRDAIVVADSGLPVPPGVNCIDLAVTKGIPPLLPVLQVILY 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 EM VE +IA+E++ + L + + + + +HEQ K + ++AVI Sbjct: 61 EMVVERVVIADELQ---------VNQSLVKSIADEVTPVSLEVVSHEQLKSLSQRARAVI 111 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PYAN+IL +GV F Sbjct: 112 RTGEWTPYANVILYSGVAF 130 >UniRef50_C6AR62 RbsD or FucU transport n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=C6AR62_RHILS Length = 147 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 6/140 (4%) Query: 5 TVLNSDISSVISRLGHTDTLVVCDAGLPIPK------STTRIDMALTQGVPSFMQVLGVV 58 +L D+ ++S +GH D L + D + + + M + +L V+ Sbjct: 8 GILCPDLLWILSAMGHGDELAIVDKNFSACRVSKKTVTGKLVSMNAASATDAIAAILAVM 67 Query: 59 TNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQA 118 + VE ++ E + + +I+ R + A Sbjct: 68 PLDHFVEQPLMHMEDPDQAGTMLPVHADVELLCSTVEMRSIKSRSIERFAYYPLAESCFA 127 Query: 119 VIRSGECSPYANIILCAGVT 138 V+ +GE PY N IL GV Sbjct: 128 VVHTGETRPYGNFILKKGVV 147 >UniRef50_Q6ABP6 D-ribose pyranase n=7 Tax=Actinobacteridae RepID=RBSD_PROAC Length = 127 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 12/139 (8%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK +LN + + ++RLGHT T VV DAGLPIP ID+A+ G P F +V + + Sbjct: 1 MKKSGLLNPQLCAAVARLGHTQTFVVADAGLPIPHEVPVIDLAVVLGTPRFQEVFDAILD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ V+ A IA E H P+ + E+ +HE K+ V+ Sbjct: 61 EVVVDGATIAHEALGHEPE------------SWVRERIEEVHTVSHEDLKKALPNVSFVV 108 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE +PY+N+I+ GV F Sbjct: 109 RTGETTPYSNVIVRCGVPF 127 >UniRef50_C5EWH0 High affinity ribose transport protein RbsD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWH0_9FIRM Length = 136 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 48/140 (34%), Positives = 78/140 (55%), Gaps = 9/140 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K ++N+DI +++ LGH D + + DAG +P +ID+A G+P + +L V + Sbjct: 1 MLKHGIINADIKYLMASLGHRDRIAITDAGYNVPSGIPKIDIAFLPGMPELLPILDGVLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++AEEIK +P+LHE + +I Y H +F + + + VI Sbjct: 61 EIAVEQVVLAEEIKSMSPKLHEEYRKRFPE--------KKICYIPHSEFDEVIKDVKGVI 112 Query: 121 RSGECSPYA-NIILCAGVTF 139 R+G+ +A NIIL AG T+ Sbjct: 113 RTGQYGLHAPNIILQAGCTY 132 >UniRef50_B4UZK2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Streptomyces RepID=B4UZK2_9ACTO Length = 131 Score = 134 bits (338), Expect = 7e-31, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 10/139 (7%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M++ +++ +++ +I+ L HTDT V+ DAGLP+ T +D+ G F+ V+ V N Sbjct: 1 MQRKGIIHRELAGLIAGLRHTDTFVISDAGLPLAPDTPVVDLGYRYGQSPFLDVIQTVLN 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE + + ++I+ NP +H L + ++ H+QFK + + + + Sbjct: 61 EIVVEHSWVTDKIREVNPTVHTGLRSF----------GLDPEPIDHDQFKARVRDVKFAV 110 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + YAN++L AGV F Sbjct: 111 RTGEDTFYANVLLRAGVPF 129 >UniRef50_A0NM05 Fucose dissimilation pathway protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NM05_9RHOB Length = 124 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 1/122 (0%) Query: 18 LGHTDTLVVCDAGLPIPKSTT-RIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHH 76 +GH D + + DA P S + + + +L V+ + V A ++ Sbjct: 1 MGHGDEIAIVDANFPAESSGPDCVRLDGISATDTLKAILSVMPLDTFVPAPARTMQVVGD 60 Query: 77 NPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAG 136 + E + + +I F + + + AV+++GE Y NIIL G Sbjct: 61 PDAVPEIVAEFQTIIDGTADKPAQIETLERHAFYEAASSAFAVVQTGETRLYGNIILTKG 120 Query: 137 VT 138 + Sbjct: 121 II 122 >UniRef50_B1Y3G2 RbsD or FucU transport n=8 Tax=Proteobacteria RepID=B1Y3G2_LEPCP Length = 156 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 12/150 (8%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIPK------STTRIDMAL-TQGVP-S 50 M K +L D+ V++ +GH D +V+ DA + + + G+ + Sbjct: 1 MLKGIDPLLTPDLLKVLAEMGHGDEIVIADANFTAASLAIGANGVRKPVLHVSGAGIGRT 60 Query: 51 FMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQG--NTIEIRYTTHEQ 108 V+ ++ + VE + ++ L + + G + + Sbjct: 61 VEAVIKLLPLDAAVEQPVAYMQVSDTPAGYRSRLQRDVIAMLADGGHARPEQCQAIERFA 120 Query: 109 FKQQTAESQAVIRSGECSPYANIILCAGVT 138 F + + + A++ +G+ PY N IL GV Sbjct: 121 FYDRVSGAFAIVLTGDLQPYGNFILKKGVI 150 >UniRef50_Q1AUT6 D-ribose pyranase 2 n=5 Tax=Actinobacteria (class) RepID=RBSD2_RUBXD Length = 154 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 9/138 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ +LN +S++++ GHTD LVVCDAG PIP+ R+D+A+ +P VL ++ Sbjct: 1 MKRSGILNQPLSNILASFGHTDLLVVCDAGFPIPRDAQRVDLAIAPDLPDLRTVLSLINE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-ESQAV 119 E E +IAEE+ NP LH L H + +E HE+ Q A ++A+ Sbjct: 61 EFITEKVVIAEEMAEFNPPLHGWLQKHF--------SGVEFERRPHEEMLTQVATSAKAI 112 Query: 120 IRSGECSPYANIILCAGV 137 +R+G P+ NI L +GV Sbjct: 113 VRTGAFDPWGNIGLVSGV 130 >UniRef50_A8RJ38 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RJ38_9CLOT Length = 147 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 7/138 (5%) Query: 7 LNSDISSVISRLGHTDTLVVCDAGLPIPKSTT----RIDMALTQGVPSFMQ-VLGVVTNE 61 ++ ++ V+ +GH DTLV+ DA P + +L ++ + Sbjct: 9 ISPELLKVLHEMGHGDTLVIGDANFPAASIAAEKNHINIRCDGHRATDMLDAILQLMPLD 68 Query: 62 MQVEAAI-IAEEIKHHNPQLHETLLTHLEQLQKHQGNTI-EIRYTTHEQFKQQTAESQAV 119 VE + I ++++ H + + KH + + F ++ AV Sbjct: 69 GFVEKPVTIMDKMEMHRDLKCPVWDEFTDIVAKHDERGADAVGFLDRFAFYDAAKDAYAV 128 Query: 120 IRSGECSPYANIILCAGV 137 + + E + YA I++ G Sbjct: 129 VSTSETAFYACIMIQKGC 146 >UniRef50_UPI00019065E7 fucose dissimilation pathway protein n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019065E7 Length = 157 Score = 129 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 6/126 (4%) Query: 19 GHTDTLVVCDAGLPIPKSTTRIDMALTQGVP------SFMQVLGVVTNEMQVEAAIIAEE 72 GH D LV+ D P + + + + +L V+ + ++ ++ E Sbjct: 25 GHGDYLVISDMNFPSDSIARQTRLGTLLTMENISAPQAIDAILSVLPLDTPIQPSVGRME 84 Query: 73 IKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANII 132 + ++ + + +G + F + ++ VI +GE Y + Sbjct: 85 VIGKPDEIPPIQQEVQAIVDRAEGKPSPMYPVERMAFYEIAKKAYCVIATGELRFYGCFL 144 Query: 133 LCAGVT 138 L GV Sbjct: 145 LTKGVI 150 >UniRef50_B3T6P2 Putative RbsD / FucU transport protein family protein n=1 Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6P2_9ZZZZ Length = 135 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 7/128 (5%) Query: 18 LGHTDTLVVCDAGLPIPKSTT-----RIDMALTQGVPSFM-QVLGVVTNEMQVEAAIIAE 71 +GH D LV+ D P + +P +L V + V + Sbjct: 1 MGHGDELVLTDCNFPSDSVAAETVTGKFIQMDGLDIPELAKAILSVFPLDSFVSEPVFRM 60 Query: 72 EIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI-RSGECSPYAN 130 E+ +L L + EI F ++ + AV+ +GE PY Sbjct: 61 EVVGKPGELVGCHKDMRNILDETSDRRWEIGSIERHAFYERAKNAYAVVCAAGERRPYGC 120 Query: 131 IILCAGVT 138 I GV Sbjct: 121 FIFIKGVI 128 >UniRef50_A7WXT5 D-ribose pyranase n=77 Tax=Bacilli RepID=RBSD_STAA1 Length = 134 Score = 126 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 61/141 (43%), Positives = 87/141 (61%), Gaps = 9/141 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MKK VLN IS I+ +GH D L + DAG+PIP RID+A+T+ +P F+ VL V Sbjct: 1 MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLE 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE--SQA 118 EM+++ +AEEIK HNP T L+Q+++ + IEI + HE+ K A ++ Sbjct: 61 EMEIQKIYLAEEIKEHNP-------TQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKG 113 Query: 119 VIRSGECSPYANIILCAGVTF 139 IR+GE +PY+NI L + VTF Sbjct: 114 NIRTGETTPYSNIALESNVTF 134 >UniRef50_Q89HT9 Bll5900 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89HT9_BRAJA Length = 147 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 8/146 (5%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGV---PSFM 52 M K +L D+ +++ +GH D LV DA P I K+T+ + G+ + Sbjct: 1 MLKSIDPILTPDLLWLLASMGHGDDLVFVDANHPATRIAKTTSSQRLIQLPGMRMETAAR 60 Query: 53 QVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQ 112 ++ V + + ++ + L ++++ G T+ F + Sbjct: 61 AIMSVYPLDDFDPDPVRVMMPVDDPDRVPDVQRAVLAEIERAAGRTVAPGKLARPDFYRA 120 Query: 113 TAESQAVIRSGECSPYANIILCAGVT 138 A V++ G+ Y ++ GV Sbjct: 121 AAAGFGVVQVGDSRGYGCFLIRKGVI 146 >UniRef50_B1JKB6 RbsD or FucU transport n=22 Tax=Yersinia RepID=B1JKB6_YERPY Length = 167 Score = 123 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 7/136 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M+ +L+ ++++ ++ LGHTD ++V DAG PIP RID+ G + +L V+ Sbjct: 1 MRPDRILHPELAAALATLGHTDIILVTDAGFPIPPQAKRIDLGFWPGTVDVLDILRVLRK 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFK-QQTAESQAV 119 E+ VE A E++ +PQL+ + T + G+ E + +HE +++ V Sbjct: 61 EIFVEEVRFASEVRDCHPQLYRDVQTL------YTGSGAEFQAASHETLCHDLAYQAKVV 114 Query: 120 IRSGECSPYANIILCA 135 IRSG +P+AN L A Sbjct: 115 IRSGSFNPWANFALVA 130 >UniRef50_Q15PP4 RbsD or FucU transport n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PP4_PSEA6 Length = 144 Score = 123 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 14/144 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIP----KSTTRIDMALTQGVPSFMQVLG 56 M K V++ I + R GH +V+ D LP+ ++T + + G+ + VL Sbjct: 1 MLKTAVIHPTILEALGRSGHFAQVVIADGNLPVAAMTGPNSTLVHLNFRPGMLDALSVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ--QTA 114 + ++ AI+ E+ N ++H L + F + Sbjct: 61 GILEVCPIQGAIVMEKPPEANAEIHTAYQALLG--------DVTWEAMERWAFYDKIRAP 112 Query: 115 ESQAVIRSGECSPYANIILCAGVT 138 + +I++GE +AN+IL GV Sbjct: 113 ATTLIIQTGEQRRFANLILTVGVV 136 >UniRef50_C7ILP1 RbsD or FucU transport n=3 Tax=Clostridiales RepID=C7ILP1_9CLOT Length = 137 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 13/144 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPI----PKSTTRIDMALTQGVPSFMQVLG 56 M K +N D+ +++ GH D +++ D P+ +T ++ + LT G+P QVL Sbjct: 1 MLKTACINPDLIGLLAACGHGDKVLIADGNYPLESKTANNTAKMYLGLTHGIPLATQVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE- 115 V+ + +E A + P++ L + I++ F + Sbjct: 61 VLGKTIAIEGAEVMVPESGDEPEIFAEFQELLP-------DGIKLSKLERYDFYDVCKKD 113 Query: 116 -SQAVIRSGECSPYANIILCAGVT 138 + I +GE +ANI++ GV Sbjct: 114 NIKIAISTGEQRVFANILITVGVV 137 >UniRef50_Q8R2K1-3 Isoform 3 of Protein fucU homolog n=1 Tax=Mus musculus RepID=Q8R2K1-3 Length = 169 Score = 122 bits (306), Expect = 4e-27, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 9/129 (6%) Query: 16 SRLGH-TDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQVEAAIIA 70 R+ H D +V+ DA P I + A +P ++ VL ++ + VE+ Sbjct: 35 CRIRHEGDEIVLADANFPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYVESPAAV 94 Query: 71 EEIKHHNPQ---LHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSP 127 ++ + + + L + + +F ++ ++ AV+ +GE + Sbjct: 95 MDLVPSDKEKGLQTPIWKRYESLLLEAD-CKKTLMKLERFEFYERAKKAFAVVATGEMAL 153 Query: 128 YANIILCAG 136 Y NIIL G Sbjct: 154 YGNIILKKG 162 >UniRef50_A5UTT7 RbsD or FucU transport n=5 Tax=Bacteria RepID=A5UTT7_ROSS1 Length = 139 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 14/144 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLP----IPKSTTRIDMALTQGVPSFMQVLG 56 M + +++ I + + GH +++ D P P S R+ + L G+ + VL Sbjct: 1 MLRYKLIHPQILAALGGAGHGSQVLIADGNYPFATGAPASAQRVYLNLAPGLLTVTDVLA 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-- 114 + + + VEAA + P + L L ++ F Sbjct: 61 ALVDAIPVEAAHVMVPDAGPEPSIFTEFRALLPYLS--------LQPLGRFAFYDAARSP 112 Query: 115 ESQAVIRSGECSPYANIILCAGVT 138 ++ VI +GE YANI+L GV Sbjct: 113 DTTLVIATGERRVYANILLTIGVV 136 >UniRef50_Q8GBR6 Putative FucU homolog (Fragment) n=1 Tax=Treponema maltophilum RepID=Q8GBR6_TREMA Length = 128 Score = 121 bits (303), Expect = 8e-27, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 1/120 (0%) Query: 20 HTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGVVTNEMQVEAAIIAEEIKHHNP 78 H D LV+ DA P R+ A +P+ + +L ++ + V ++ + Sbjct: 1 HGDELVLSDAFYPGDSCNARVLRADGIKIPALLDGILRLINIDPYVNDPLVMMNAAKGDT 60 Query: 79 QLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVT 138 ++ + ++ + I F +++ + A++ SGE Y NII+ GV Sbjct: 61 LDPAVEASYFKAIKNIYPDAPAIARIDRFAFYERSKSAFAIVVSGETVKYGNIIIKKGVV 120 >UniRef50_D1BIP0 ABC-type ribose transport system, auxiliary component n=3 Tax=Actinomycetales RepID=D1BIP0_SANKS Length = 127 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 12/139 (8%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 MK+ VLN ++ ++RLGH ++V D G PIP +D+++ GVP F QVL V + Sbjct: 1 MKRSGVLNPALAEGLARLGHGHLVLVVDCGTPIPPGARVVDVSVVAGVPGFTQVLDAVLD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 E+ VE ++ A E + + + HE K + VI Sbjct: 61 EIVVEGSVAASESAG---TVVAGW---------LEERGLSPELVPHEDLKALLPGAALVI 108 Query: 121 RSGECSPYANIILCAGVTF 139 R+GE + +AN+ L GV F Sbjct: 109 RTGEATAWANVGLRCGVPF 127 >UniRef50_C5EN53 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN53_9FIRM Length = 147 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 51/147 (34%), Gaps = 11/147 (7%) Query: 1 MKKGTV---LNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQV 54 M K + ++SD+ ++ +GH D L++ D P I + Sbjct: 1 MLK-GIPTRISSDLLKALADMGHGDLLIIADDFYPPITKTPGGVSIQAKGNSAADMIEDI 59 Query: 55 LGVVTNEM-QVEAAIIAE---EIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFK 110 L ++ ++ E + + + + ++ + K+ + +F Sbjct: 60 LKLMPLDVDYCEYPVEYMIPDKDSGISMDRPKVWDDAIDAVVKNGYAPKIVGEIERSKFY 119 Query: 111 QQTAESQAVIRSGECSPYANIILCAGV 137 ++ + + + E PY IL GV Sbjct: 120 EKAGRAYVTVCTSERQPYGCFILQKGV 146 >UniRef50_A7BC25 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC25_9ACTO Length = 138 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 46/136 (33%), Gaps = 11/136 (8%) Query: 8 NSDISSVISRLGHTDTLVVCDAGLPIPKST----TRIDMALTQGVPSFMQVLGVVTNEMQ 63 + ++ GH +++ DA P I + L G+ QVL V+ + Sbjct: 3 HPQFLRALAAAGHGSKILLADANYPHTTGVNPRCELISLNLAPGLLDVSQVLDVLKRTIP 62 Query: 64 VEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE--SQAVIR 121 +E A I +P L +E + F + ++ Sbjct: 63 IERAEIMTPAPDADPVEIPIHDEFRAALP-----GVEFGEISRWDFYDAARDENVGIIVA 117 Query: 122 SGECSPYANIILCAGV 137 +GE Y N++L GV Sbjct: 118 TGEQRLYGNLLLTVGV 133 >UniRef50_A6WDZ4 RbsD or FucU transport n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6WDZ4_KINRD Length = 144 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 13/143 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPI----PKSTTRIDMALTQGVPSFMQVLG 56 M +L+ + + ++ GH D +V+ D P+ S + + L G+ + + VL Sbjct: 1 MLTYDLLHPQLLAGLAAAGHGDRVVLADGNFPLRAGTNPSVPVVHLNLRPGLVTVLDVLE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-- 114 + + VEAA + H+ L G + F Q+ Sbjct: 61 PLLGAVPVEAATVMASPDGAPVPAHDDYARLL-------GERAALSAVDRWAFYAQSRAD 113 Query: 115 ESQAVIRSGECSPYANIILCAGV 137 + V+ + + AN+IL GV Sbjct: 114 DVALVVATADQRLCANLILTVGV 136 >UniRef50_A3DCF4 RbsD or FucU transport n=4 Tax=Clostridiales RepID=A3DCF4_CLOTH Length = 151 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 8/136 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M + +LN DI++ +++LGHTD +++ DAGL IP +T ID++L P+ + VL V+ Sbjct: 11 MVETGILNRDIAAELAKLGHTDRVLIADAGLAIPNTTKVIDVSLDVNFPTTVDVLKVLLK 70 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ-QTAESQAV 119 VE I+++ +P ++ L+ ++ ++ H + T E + Sbjct: 71 HFSVEKLILSQATVDVSPSRYKEYLSLFDE-------SVPCEIVEHSTLRDTLTKEVKFA 123 Query: 120 IRSGECSPYANIILCA 135 IR+G+ + +NIIL + Sbjct: 124 IRTGDFTANSNIILVS 139 >UniRef50_D2R7C7 RbsD or FucU transport n=4 Tax=Bacteria RepID=D2R7C7_9PLAN Length = 148 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 10/146 (6%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIP----KSTTRIDMALTQGVPSFMQVLG 56 M + T+++ +IS V++ GH +++ D P + T + M L G+ + Q L Sbjct: 1 MLRSTLIHPEISRVLAAAGHHAKILIADGHYPASSKKGPNATVVSMNLMPGLITCDQALQ 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQL---HETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQT 113 V + + ++ K L + + L K G +E++ F Sbjct: 61 AVLSAVPIDEINTMNYPKDDPYTLDSDPPVWNEYRQTLAKL-GMNLELKPIDKWDFYDAV 119 Query: 114 AESQAV--IRSGECSPYANIILCAGV 137 A + V I++ + +AN++L GV Sbjct: 120 ATADHVLTIQTADTQRFANLLLSIGV 145 >UniRef50_B1ZN30 RbsD or FucU transport n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=B1ZN30_OPITP Length = 129 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 7/135 (5%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M + +LN + S+++R+ HT+T+VV D G P+ +D++L VP+ QVL + Sbjct: 1 MIRTGILNPAVLSLLARVRHTNTVVVADRGFPLWPQIETVDLSLVDDVPTVRQVLDAILP 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVI 120 + + EE + N + +E L+ H G I + + H +FK++ + +I Sbjct: 61 QYVIGRIFAEEEFRQVNSP------SVVEALRDHTGA-IPLVFEPHVEFKRRVPHAIGLI 113 Query: 121 RSGECSPYANIILCA 135 R+G+ +PYAN+IL + Sbjct: 114 RTGDSTPYANLILES 128 >UniRef50_C9Y9X7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9X7_9BURK Length = 145 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 8/145 (5%) Query: 1 MKK--GTVLNSDISSVISRLGHTDTLVVCDAGLPIP---KSTTRIDMALTQGVPSF-MQV 54 M K +L ++ +S +GH + + V DA K + + + V Sbjct: 1 MLKGLDPLLTPELLMHLSAMGHGEWVAVVDANFTADFLGKGKALVRLP-GHSLERVSKAV 59 Query: 55 LGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTI-EIRYTTHEQFKQQT 113 L V V ++ + + + L G + F ++ Sbjct: 60 LSVFPLAEDVACPAAYMQVCNSPEGHRTAAQSSVVDLLGRDGLPANRVEAVERFAFYEKI 119 Query: 114 AESQAVIRSGECSPYANIILCAGVT 138 + +++SGE + Y N + C GV Sbjct: 120 KGASVIVQSGEATAYGNAMFCKGVI 144 >UniRef50_C6AZA9 RbsD or FucU transport n=18 Tax=Alphaproteobacteria RepID=C6AZA9_RHILS Length = 158 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 2/124 (1%) Query: 17 RLGHTDTLVVCDAGLPIPKSTTRIDMALTQG-VPSFMQVLGVVTNEMQVEAAIIAEEIKH 75 +GH D + + D P + R+ +P VL V+ + V AI +K Sbjct: 19 AMGHGDEIAIVDGNYPGVEHARRLIRLDGHHLIPVLNAVLSVLPIDDFVAEAIFRSTVKA 78 Query: 76 HNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCA 135 +L ++ +H+ + ++ + F + + A+I++GE YANIIL Sbjct: 79 ERDKLDPVHEEMIDCCARHEPHR-QVVPLIGQDFYGRVKTAHALIQTGEPRLYANIILRK 137 Query: 136 GVTF 139 GV + Sbjct: 138 GVIY 141 >UniRef50_C0CRI2 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CRI2_9FIRM Length = 136 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 13/143 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIP--KSTTRIDMALTQGVPSFMQVLGVV 58 M KG +++ ++ ++ GH +++ D P+ S +I + L GVPS ++VL + Sbjct: 1 MLKGKLIHPELIHQLALCGHGSKILIADGNYPLEEKSSGVKIFLGLGPGVPSVIEVLAAI 60 Query: 59 TNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAE--- 115 + ++E A + P++ L L+ + F E Sbjct: 61 HSVCEIEKAQVMVPEDDREPEIFGEFRRELPDLELEELV--------RYDFYAACMEEGV 112 Query: 116 SQAVIRSGECSPYANIILCAGVT 138 + + +GE +ANI+L G Sbjct: 113 LKLAVSTGEQRTFANILLTVGCV 135 >UniRef50_C5C446 RbsD or FucU transport n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C446_BEUC1 Length = 136 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 9/133 (6%) Query: 4 GTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQ 63 +L + + + +GH+D +VV DA P + R+ P ++ L V Sbjct: 6 HPLLTGSLLAALDAMGHSDAVVVADAHFPAARLAARLVELPGTTAPQVVEALCTVLPLDD 65 Query: 64 VEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSG 123 A + + P + + L+T + F A++ V+R+G Sbjct: 66 GPDAAVLMDAPERQP-VQDELVTAAGAPESSG--------IDRFAFYDAAAQAFLVVRTG 116 Query: 124 ECSPYANIILCAG 136 E Y N++L G Sbjct: 117 ETRAYGNLLLRKG 129 >UniRef50_C9YX65 Fuscose operon fucU protein n=2 Tax=Streptomyces RepID=C9YX65_STRSW Length = 145 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 13/143 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKS----TTRIDMALTQGVPSFMQVLG 56 M +L+ I ++ GH +++ D P + + + L G+ VL Sbjct: 1 MLLTDLLHPGILEALAGAGHGSRVLLADGHYPASTATGERARIVHLNLAPGLLDVTTVLD 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA-- 114 V+ + +E+A + K + + ++L + + +F Sbjct: 61 VLLRAIPIESAHVMVPPKGEPE--PPAIAEYRDRLA-----PVPVETLGRFEFYDAARYS 113 Query: 115 ESQAVIRSGECSPYANIILCAGV 137 + I + + YAN++L GV Sbjct: 114 DVALAIVTADTRTYANLLLTIGV 136 >UniRef50_Q54473 Regulation protein n=2 Tax=Enterobacteriaceae RepID=Q54473_SERMA Length = 138 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 13/141 (9%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLP----IPKSTTRIDMALTQGVPSFMQVLG 56 M K + + + + +++ GH +++ D PK T + + L G + +L Sbjct: 1 MIKSAITHPPLLAALAQCGHKTQVLIADGNYACVTHAPKDATVVYLNLAPGTLAAPPILE 60 Query: 57 VVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAES 116 + + VE+A + + L + I Y E F Sbjct: 61 KLLACINVESAALMACPPDFTNTIEAEYRQLLPEH-------CPIEYLPREAFYAAVKSD 113 Query: 117 Q--AVIRSGECSPYANIILCA 135 + VI SGE +AN++L Sbjct: 114 RTLLVIASGERRRFANLLLTV 134 >UniRef50_Q1R0M9 RbsD or FucU transport n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1R0M9_CHRSD Length = 144 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 6/122 (4%) Query: 23 TLVVCDAGLP----IPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNP 78 ++V DA P P + +R+ + L +G+ V+ V+ + VEA + Sbjct: 23 KILVADALYPHSTGAPATASRVYLNLCEGMVPAQAVMDAVSQSVAVEAITFMATAEGKAS 82 Query: 79 QLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ--QTAESQAVIRSGECSPYANIILCAG 136 + L + G TI F + + +I +GE PY+N +L G Sbjct: 83 ETVVDCQQRLAGHRHGNGQTIAWSGLERWAFYDACRAPDVCLLIATGERRPYSNFLLTIG 142 Query: 137 VT 138 V Sbjct: 143 VP 144 >UniRef50_C3RHV1 Predicted protein n=2 Tax=Bacteria RepID=C3RHV1_9MOLU Length = 156 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 16/145 (11%) Query: 1 MK-KGTVLNSDISSVISRLGHTDTLVVCDAG--------LPIPKSTTRIDMALTQGVPSF 51 MK K +L+ +++V++ L H + L + DAG P+ S ID+ + G PSF Sbjct: 1 MKPKKRILHERLAAVVASLRHGEMLFIADAGSGTSSKALYPLDSSVEYIDVEVVTGSPSF 60 Query: 52 MQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQ 111 ++ + E AI+ E++ + + ++ L+ L + H + I ++ + Sbjct: 61 EDIVTTLVACGDFEGAIVTEDMIEVDQKDYQLLVDLLGKKNIHSMHYIP-------EYYE 113 Query: 112 QTAESQAVIRSGECSPYANIILCAG 136 +AV+++G+ +A IL AG Sbjct: 114 MRDRCKAVVQTGDYGVHAQAILIAG 138 >UniRef50_UPI0000F2AEE0 PREDICTED: similar to RIKEN cDNA 1810014F10 gene n=1 Tax=Monodelphis domestica RepID=UPI0000F2AEE0 Length = 172 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 17/117 (14%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLP---IPKSTTRIDMALTQGVPSFMQ-VLGVVTNE 61 +L+ ++ ++++GH D +V+ DA P I + A VP ++ +L ++ + Sbjct: 10 LLSPELLFALAKMGHGDEIVLADANFPTSSICRCGPVEIRADGLSVPQLLESILKLLPLD 69 Query: 62 MQVEAAIIAEEIKHHNP----QLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTA 114 +++ ++ + Q E T L + K+ T Sbjct: 70 TYEPNSVMVMDVVESDKAKGLQTPEVWQTFRSLLSQTG---------FRMALKEITR 117 >UniRef50_Q98PW9 HIGH AFFINITY RIBOSE TRANSPORT PROTEIN RBSD n=1 Tax=Mycoplasma pulmonis RepID=Q98PW9_MYCPU Length = 133 Score = 89.9 bits (222), Expect = 3e-17, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 70/133 (52%), Gaps = 11/133 (8%) Query: 6 VLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVE 65 ++N+ ++ +SR+ +VVCD PIP +D++L VPSF Q++ ++ + ++ Sbjct: 8 IINTTLNETLSRIQTNQKIVVCDPYFPIPVGANILDLSLIANVPSFKQLMFLIIENLHIK 67 Query: 66 AAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAV--IRSG 123 A +++ EIK HN L++ + E+FK ++++ V +R G Sbjct: 68 ALVLSNEIKEHNYDYLAYLISSKLPISLSNNF---------EEFKYLSSQNDVVLYVRVG 118 Query: 124 ECSPYANIILCAG 136 E +P++N I+ AG Sbjct: 119 ELTPFSNTIVVAG 131 >UniRef50_B9E9Z6 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E9Z6_MACCJ Length = 208 Score = 89.1 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 34/90 (37%), Positives = 49/90 (54%) Query: 1 MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTN 60 M K LNS+IS V+S LGHTDT+V+ D GLP+PK +ID+A+ QG+PSF+ + + + Sbjct: 1 MYKTGTLNSEISKVLSDLGHTDTIVIGDCGLPVPKGVQKIDLAVRQGLPSFIDIATLFMD 60 Query: 61 EMQVEAAIIAEEIKHHNPQLHETLLTHLEQ 90 + +I I H E Sbjct: 61 RFKRRNVLIVGAIAMGLSFFALAWAFHFEA 90 >UniRef50_C8T2D3 Fucose operon FucU protein n=2 Tax=Enterobacteriaceae RepID=C8T2D3_KLEPR Length = 129 Score = 88.3 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 1 MKKG--TVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQ-VLGV 57 M K +++ ++ V++ +GH D ++ DA P ++ A V +Q ++ + Sbjct: 1 MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLRVSDLLQAIIPL 60 Query: 58 VTNEMQVEAAIIAEEIKHHNPQLHETLLTHLE 89 + ++ + + Sbjct: 61 FELDSYAP-PVVMMAAVEGDALDPTVEQRYRR 91 >UniRef50_C9Z5Q7 Putative carbohydrate transport protein n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z5Q7_STRSW Length = 77 Score = 78.3 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 39/114 (34%) Query: 26 VCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLL 85 VCDAG+P+P + +A GVPSF +VL Sbjct: 3 VCDAGMPVPDGPRLVGLAFRAGVPSFAEVL------------------------------ 32 Query: 86 THLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF 139 + ++ THE K+ A ++ ++ +GE PYAN++L GV F Sbjct: 33 ---------EDRFPDLEPVTHETLKEPAAGARLIVWTGEARPYANVLLRCGVFF 77 >UniRef50_UPI0001903CC7 fucose dissimilation pathway protein n=2 Tax=cellular organisms RepID=UPI0001903CC7 Length = 79 Score = 54.8 bits (131), Expect = 9e-07, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Query: 74 KHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIIL 133 + +HE ++ + + H+ ++ + F + + A+I++ E YANII+ Sbjct: 4 RDKLDPVHEEMIDCCARHEPHR----QVVPLVGQDFYGRVRAAHALIQTSEPRLYANIIM 59 Query: 134 CAGVTF 139 GV + Sbjct: 60 RKGVIY 65 >UniRef50_B2UPT8 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPT8_AKKM8 Length = 266 Score = 39.4 bits (91), Expect = 0.033, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%) Query: 10 DISSVISRLGHTDTLVVCDAGLPIPKSTT-RIDMALTQGVPSFMQVLGVVTNE-MQVEAA 67 + ++ +G + +V+ ++ P T R ++ + VL ++ E V Sbjct: 30 QLYKNLAIVGARNWIVIAESSFPAYTGTGIRTMVSDKTSDEVLLDVLNMLEEEAHVVPRI 89 Query: 68 IIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHE--QFKQQTAESQ--AVIRSG 123 +I+ E++ + + + K + + A VI++ Sbjct: 90 MISSELRSVTEDYAPGIKRYRNNINKMLPGRQHFELMSRTINSLIEDAARQFNVLVIKTK 149 Query: 124 ECSPYANI 131 PY+NI Sbjct: 150 TSLPYSNI 157 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.158 0.479 Lambda K H 0.267 0.0485 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 879,935,879 Number of Sequences: 3077464 Number of extensions: 33860454 Number of successful extensions: 103419 Number of sequences better than 1.0e-01: 76 Number of HSP's better than 0.1 without gapping: 177 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 103018 Number of HSP's gapped (non-prelim): 195 length of query: 139 length of database: 1,040,396,356 effective HSP length: 103 effective length of query: 36 effective length of database: 723,417,564 effective search space: 26043032304 effective search space used: 26043032304 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 88 (38.3 bits)