28 d1nrfa_ Probab=100.00  E-value=0  Score=336.61  Aligned_columns=242  Identities=21%

Q ss_pred             CCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             99607995488999999999731565599972899809999527877611002555524455311575463210224266
Q batch____       246 AGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGV  325 (633)
Q Consensus       246 ~G~~I~lTID~~lQ~~~e~~l~~~~ga~Vvmd~~TG~ILAmas~P~ydpn~~~~~~~~~~~~~l~~~~~~~~~Nra~~~~  325 (633)
                      +|.||.   +.++++..++.  +.+|++|+||++||++++      ||+|                        ||.+ .
T Consensus         3 ~g~~i~---~~~~~~~~~~~--~~~g~~vv~d~~tg~~~~------~n~n------------------------ra~~-~   46 (246)
T d1nrfa_           3 PGTNVE---YEDYSTFFDKF--SASGGFVLFNSNRKKYTI------YNRK------------------------ESTS-R   46 (246)
T ss_dssp             SSCEEE---ECCCHHHHHTT--TEEEEEEEEETTTTEEEE------ECHH------------------------HHHS-C
T ss_pred             CCCHHH---HHHHHHHHHHH--CCCEEEEEEECCCCEEEE------ECCC------------------------CCCC-C
T ss_conf             720001---58999999871--896089999889981998------3331------------------------0147-8


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCEEECCCEEEECCEEEEEEECCCCCCCEEEHHHHHHHCCHHHHHHHHHHCCHHHHH
Q ss_conf             89840578999999998799981228963863898882035743588884202199998865789999999870989999
Q batch____       326 YPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLS  405 (633)
Q Consensus       326 y~PGStfK~~t~~aaLe~g~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~g~itl~~al~~S~N~~~~~i~~~lg~~~~~  405 (633)
                      |+|||||||+++++|||+|.+++++++.|.+.     ..+.++||    |+.+++++||++|||++|+++++++|.+.+.
T Consensus        47 ~~PgStfK~~ta~aaLe~g~~~~~~~~~~~~~-----~~~~~~~~----~~~~tl~~Al~~S~N~~~~~l~~~iG~~~~~  117 (246)
T d1nrfa_          47 FAPASTYKVFSALLALESGIITKNDSHMTWDG-----TQYPYKEW----NQDQDLFSAMSSSTTWYFQKLDRQIGEDHLR  117 (246)
T ss_dssp             BCCGGGGHHHHHHHHHHHTSSCSSCCCBCCCC-----CCCSSTTT----SSCBCHHHHHHHTCHHHHHHHHHHHCHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCEEECCCC-----EEECCCCC----CCCCCHHHHHHHCCHHHHHHHHHCCCHHHHH
T ss_conf             79820689999999998499898627864882-----33020588----9851498967631038677565126988999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEECCEEEE
Q ss_conf             99998389986788887644585567021100245556710233343203546435899999999853288673678898
Q batch____       406 EWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLM  485 (633)
Q Consensus       406 ~~~~~~Glg~~tgidlp~E~~g~ip~~~~~~~~~~~~~~~~~~~~~siGqG~~~vTplqla~~~a~iaN~G~~~~P~lv~  485 (633)
                      +++++|||++.+....                            ..++++|.+.+||+|||++|++|+|+|..       
T Consensus       118 ~~~~~~G~g~~~~~~~----------------------------~~~~~~g~~~vTPlq~a~~~~~ian~g~~-------  162 (246)
T d1nrfa_         118 HYLKSIHYGNEDFSVP----------------------------ADYWLDGSLQISPLEQVNILKKFYDNEFD-------  162 (246)
T ss_dssp             HHHHHTTCTTCCCSCT----------------------------TTTTTSSSSCBCHHHHHHHHHHHHHTTTC-------
T ss_pred             HHHHHCCCCCCCCCCC----------------------------CHHHHCCCEEEEHHHHHHHHHHHHCCCCC-------
T ss_conf             9999819998666777----------------------------63541571156389999999999619830-------


Q ss_pred             EEECCCCCEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCCCCEEHHCCCCCEEEEEECCEEECCCCCCCCCCCCCCCC
Q ss_conf             89859984845148867402189999999999999972189841001003687148877340240257777645554245
Q batch____       486 STAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIA  565 (633)
Q Consensus       486 ~i~~~~g~~~~~~~~~~~~~~~s~~~a~~i~~~m~~vv~~~~Gt~~~~~~~~~~~vaGKTGTAe~~~~~~~~~~~~~~~~  565 (633)
                                           +++++++.++++|            +.....++.++|||||++.               
T Consensus       163 ---------------------~s~~~~~~i~~~m------------~~~~~~g~~~agKTGta~~---------------  194 (246)
T d1nrfa_         163 ---------------------FKQSNIETVKDSI------------RLEESNGRVLSGKTGTSVI---------------  194 (246)
T ss_dssp             ---------------------CCHHHHHHHHHHH------------EEEEETTEEEEEEEEEEEC---------------
T ss_pred             ---------------------CCHHHHHHHHHHH------------HHHCCCCCEEEEECCCCCC---------------
T ss_conf             ---------------------6999999999887------------7321476212651433546---------------


Q ss_pred             CCCCCCEEEEEEEECCCCCEEEEEEEC--CCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             677774599999631888299999974--98844257899999999986048
Q batch____       566 ERLRDHKLMTAFAPYNNPQVAVAMILE--NGGAGPAVGTLMRQILDHIMLGD  615 (633)
Q Consensus       566 ~~~~~~~wF~g~~P~~~P~~~v~V~v~--~~~~g~~aapi~~~i~~~~~~~~  615 (633)
                      ....+++||+||+|.++|+|+++|+++  .+.++..|+||+++|++.+-..+
T Consensus       195 ~~~~~~~WfvG~~p~~~~~~~iav~i~~~~~~~~~~Aa~I~~~I~~~l~i~p  246 (246)
T d1nrfa_         195 NGELHAGWFIGYVETADNTFFFAVHIQGEKRAAGSSAAEIALSILDKKGIYP  246 (246)
T ss_dssp             SSSCEEEEEEEEEECSSCEEEEEEEEEESCSCHHHHHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf             7886535899999718981999999967988762478999999999758996