Phyre 2 alignment of P0ACR2 with c2bx9J_

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Job Description | P0ACR2
Confidence | 32.66% | Date | Thu Jan 5 11:18:47 GMT 2012
Rank | 361 | Aligned Residues | 24
% Identity | 29% | Template | c2bx9J_
PDB info | PDB header:transcription regulation | Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory | PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | H | R | D | V | E | L | T | A | A | G | A | W | F | L | K | E | G | R | S | V | V | K | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | G | K | G | V | I | L | T | A | Q | G | Y | T | L | L | D | F | I | Q | K | H | L | N | K
Template Known Secondary structure |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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