Phyre 2 alignment of P0ACR2 with d1nkta1

Return to main results | Retrieve Phyre Job Id

Job Description | P0ACR2
Confidence | 21.02% | Date | Thu Jan 5 11:18:47 GMT 2012
Rank | 406 | Aligned Residues | 47
% Identity | 13% | Template | d1nkta1
SCOP info | Pre-protein crosslinking domain of SecA | Pre-protein crosslinking domain of SecA | Pre-protein crosslinking domain of SecA
Resolution | 2.60

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | A | V | S | Y | T | V | R | Q | L | E | E | W | L | A | V | P | L | F | E | R | R | H | R | D | V | E | L | T | A | A | G | A | W | F | L | K | E | G | R | S | V | V | K | K | M | Q | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | E | F | A | R | L | A | P | L | M | E | K | D | V | H | Y | E | . | V | D | L | R | K | R | T | V | G | V | H | E | K | G | V | E | F | V | E | D | Q | L | G | I | D | N | L | Y | E | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | S |  | B | T | T | T |  |  | . |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  | S | S | T | T |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |  | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions