18/01/2012 04:20:25 : INFO  : Run start: Wed Jan 18 04:20:24 GMT 2012
18/01/2012 04:20:29 : INFO  : Initialised job
18/01/2012 04:20:30 : INFO  : Renaming log file 'phyre2_20120118_042023.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/phyre_20120118_042023.log'
18/01/2012 04:20:31 : INFO  : Initialised job:
Sequence
>batch____
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA
AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDD
VELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLAL
MDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMV
PTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLR
EPEETPATGD

18/01/2012 04:20:32 : INFO  : Checked sequence
18/01/2012 04:20:35 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 04:20:36 : INFO  : PSI-BLAST 3 iterations
18/01/2012 04:23:06 : INFO  : PSI-BLAST 5 iterations
18/01/2012 04:27:21 : INFO  : Finished PSI-BLAST
18/01/2012 04:27:23 : INFO  : Running Buildali to generate a3m file
18/01/2012 08:38:50 : INFO  : Converting to HMM
18/01/2012 08:39:12 : INFO  : Calibrating HMM
18/01/2012 08:39:26 : INFO  : Searching HMM database
18/01/2012 08:46:19 : INFO  : Finished buildali
18/01/2012 08:46:21 : INFO  : Predicting secondary structure
18/01/2012 08:46:26 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 08:46:28 : INFO  : Predicting Disordered regions
18/01/2012 08:46:32 : INFO  : Predicted Disorder (Disopred)
18/01/2012 08:46:34 : INFO  : Running memsat_svm check
18/01/2012 08:48:40 : INFO  : Running memsat_svm full
18/01/2012 08:54:18 : INFO  : Predicted Transmembrane (memsat_svm) ID 'bc32f53edb4d9cf6'
18/01/2012 08:54:19 : INFO  : Initialising fold library search
18/01/2012 08:54:22 : INFO  : Initialised search input
18/01/2012 08:54:25 : INFO  : Building Ensemble models
18/01/2012 08:54:28 : INFO  : Building hh.c3fzjC_.model.1.pdb
18/01/2012 08:54:43 : INFO  : Building hh.c2esnC_.model.2.pdb
18/01/2012 08:54:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/hh.c2esnC_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/c2esnC_.2.pdb
18/01/2012 08:54:57 : INFO  : Building hh.c3hhgF_.model.3.pdb
18/01/2012 08:55:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/hh.c3hhgF_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/c3hhgF_.3.pdb
18/01/2012 08:55:10 : INFO  : Building hh.c3t1bB_.model.4.pdb
18/01/2012 08:55:21 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/hh.c3t1bB_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/c3t1bB_.4.pdb
18/01/2012 08:55:25 : INFO  : Building hh.c1iz1B_.model.5.pdb
18/01/2012 08:55:36 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/hh.c1iz1B_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/c1iz1B_.5.pdb
18/01/2012 08:55:39 : INFO  : Building hh.c3fzvC_.model.6.pdb
18/01/2012 08:55:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/hh.c3fzvC_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/bc32f53edb4d9cf6/c3fzvC_.6.pdb
18/01/2012 08:55:55 : INFO  : Building c3fzjC_.1.pdb
18/01/2012 08:56:09 : INFO  : Building c2esnC_.2.pdb
18/01/2012 08:56:22 : INFO  : Building c3hhgF_.3.pdb
18/01/2012 08:56:35 : INFO  : Building c3t1bB_.4.pdb
18/01/2012 08:56:48 : INFO  : Building c1iz1B_.5.pdb
18/01/2012 08:57:02 : INFO  : Building c3fzvC_.6.pdb
18/01/2012 08:57:15 : INFO  : Building c3ispA_.7.pdb
18/01/2012 08:57:29 : INFO  : Building c1b9nA_.8.pdb
18/01/2012 08:57:42 : INFO  : Building c3m1eA_.9.pdb
18/01/2012 08:57:56 : INFO  : Building d2esna1.10.pdb
18/01/2012 08:58:09 : INFO  : Building d1b9ma1.11.pdb
18/01/2012 08:58:23 : INFO  : Building d1ixca1.12.pdb
18/01/2012 08:58:36 : INFO  : Building c3oxnD_.13.pdb
18/01/2012 08:58:50 : INFO  : Building c2ijlB_.14.pdb
18/01/2012 08:59:03 : INFO  : Building d2esna2.15.pdb
18/01/2012 08:59:16 : INFO  : Building c2hxrA_.16.pdb
18/01/2012 08:59:28 : INFO  : Building d1utha_.17.pdb
18/01/2012 08:59:42 : INFO  : Building c3jv9B_.18.pdb
18/01/2012 08:59:54 : INFO  : Building c3fd3A_.19.pdb
18/01/2012 09:00:08 : INFO  : Building d2fyia1.20.pdb
18/01/2012 09:01:52 : INFO  : Finished HH model building
18/01/2012 09:01:54 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 09:02:53 : INFO  : html domain output complete ID 'bc32f53edb4d9cf6'
18/01/2012 09:50:08 : INFO  : Run end  : Wed Jan 18 09:50:07 GMT 2012
