51 c1nijA_ Probab=94.33   E-value=0.036  Score=34.95  Aligned_columns=138  Identities=16%

Q ss_pred             CCCEEEECCEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCHHHCCCHHHHHHHHCCCCEEEE
Q ss_conf             98689974431168987089999999999789809997688998865862884799996793957899998489829995
Q batch____        45 PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAESYPLLLSADTTTAQAGDEPVLIYQRTDAPVAVS  124 (328)
Q Consensus        45 pvpVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~pV~V~  124 (328)
                      ++||..|  ---=|+|||-+...|++.  .+|.+++||.--+|...=....+...+       +|-..|  ..||.-...
T Consensus         2 ~ipv~ii--tGfLGaGKTTll~~ll~~--~~~~~~avi~Nefg~~~iD~~ll~~~~-------~~v~~l--~~GCiCC~~   68 (317)
T c1nijA_           2 PIAVTLL--TGFLGAGKTTLLRHILNE--QHGYKIAVIENEFGEVSVDDQLIGDRA-------TQIKTL--TNGCICCSR   68 (317)
T ss_dssp             CEEEEEE--EESSSSSCHHHHHHHHHS--CCCCCEEEECSSCCSCCEEEEEECTTS-------CEEEEE--TTSCEEECT
T ss_pred             CCCEEEE--CCCCCCCHHHHHHHHHHC--CCCCEEEEEEECCCCCCHHHHHHHHCC-------CEEEEE--CCCCEECCC
T ss_conf             7618998--089888988999999842--699738999716644420588984079-------729997--799542132


Q ss_pred             CCHHHHHHHHHHC-----CCCCCEEEEC-----------CCCCC-CCCCCCEE----EEEEECCCCCCCCCEEECCCCCC
Q ss_conf             6389999999970-----6999899973-----------83445-41028717----99973778876761312577658
Q batch____       125 PVRSDAVKAILAQ-----HPDVQIIVTD-----------DGLQH-YRLARDVE----IVVIDGVRRFGNGWWLPAGPMRE  183 (328)
Q Consensus       125 ~dR~~a~~~l~~~-----~~~~dviIlD-----------DGfQh-~~L~RD~~----Ivlida~~~~Gng~~LPaG~LRE  183 (328)
                      +.-...+-..+.+     ..++|.|+..           +.|++ ..+...+.    |.++|+....-.-.-.|     +
T Consensus        69 ~~~~~~~l~~l~~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~~~~~~~~~~-----~  143 (317)
T c1nijA_          69 SNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFT-----I  143 (317)
T ss_dssp             TSCHHHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHHHCH-----H
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHHHHH-----H
T ss_conf             47789999999984125546866899808875798999988630820113089801789974026777663225-----5


Q ss_pred             CHHHHCCCCEEEEECCC
Q ss_conf             96571236689981887
Q batch____       184 RAGRLKSVDAVIVNGGV  200 (328)
Q Consensus       184 p~~~l~rad~vi~t~~~  200 (328)
                      ...++..||.+++|+.+
T Consensus       144 ~~~Qi~~Ad~ivlnk~D  160 (317)
T c1nijA_         144 AQSQVGYADRILLTKTD  160 (317)
T ss_dssp             HHHHHHTCSEEEEECTT
T ss_pred             HHHHHHHCCEEEEECCC
T ss_conf             64453107789960556