27 c3fluD_ Probab=86.02   E-value=2.8  Score=21.99  Aligned_columns=133  Identities=15%

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEE--ECCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf             9998999999999998899549998--36888888886467899999999736970899954777888899899999999
Q batch____        93 DATPDELRTIARDYWNNGIRHIVAL--RGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLK  170 (296)
Q Consensus        93 d~n~~~l~~~L~~~~~~Gi~nvL~l--~GD~p~~~~~~~~~a~dLv~~i~~~~~f~igva~~Pe~hp~~~~~~~e~~~L~  170 (296)
                      +.+..++...+..+.+.|++.+++.  +|..+.-.......-.+.+.-......--+.+++-+       +.+.-++..+
T Consensus        20 ~iD~~~~~~~~~~l~~~Gv~gi~~~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~-------~~~~~i~~a~   92 (293)
T c3fluD_          20 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGAN-------NTVEAIALSQ   92 (293)
T ss_dssp             CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS-------SHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCC-------CHHHHHHHHH
T ss_conf             848899999999999779989998772357021799999999999999608997399965889-------9999999999


Q ss_pred             HHHHCCCCEEEECCCC----CHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC
Q ss_conf             9997389899964335----9899999999999779998699873476898999999850288789899999861469
Q batch____       171 RKVDAGANRAITQFFF----DVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDD  244 (296)
Q Consensus       171 ~K~~aGA~f~iTQ~~f----d~~~~~~~~~~~r~~Gi~~PIi~Gi~p~~s~k~~~~~~~~~Gv~iP~~l~~~l~~~~~  244 (296)
                      .=.++||+.++.++-|    +.+.+.+|.+.+... .++||+.--.|           ...|..+|.++++++....+
T Consensus        93 ~a~~~Gad~v~~~pP~~~~~s~~~i~~~~~~ia~~-~~~pi~~Yn~P-----------~~tg~~~s~~~~~~L~~~~~  158 (293)
T c3fluD_          93 AAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEA-TSIPMIIYNVP-----------GRTVVSMTNDTILRLAEIPN  158 (293)
T ss_dssp             HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHT-CCSCEEEEECH-----------HHHSSCCCHHHHHHHTTSTT
T ss_pred             HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECC-----------CCCCCCCCHHHHHHHHCCCC
T ss_conf             99854998999938878899988999999999975-49989999675-----------33367759899999834798