54 c1ks9A_ Probab=99.63   E-value=3.1e-15  Score=123.76  Aligned_columns=247  Identities=13%

Q ss_pred             CEEEEEECCHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEECCHHHHHCCCCEEEE
Q ss_conf             969998089667999999952-9829999789899989973899856778899986036754852798898429989998
Q batch____         1 MKITISGTGYVGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII   79 (388)
Q Consensus         1 MkI~VIGlG~vGl~lA~~lA~-G~~V~g~D~~~~~v~~L~~g~~~~~E~~l~e~l~~~~~~l~~t~~~~~~~~~advvii   79 (388)
                      |||+|||+|+||.++|..|++ ||+|++||+++++.+.++.....-..           .....+.+..++..++|++++
T Consensus         1 MkI~viG~G~mG~~~a~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~D~Iii   69 (291)
T c1ks9A_           1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSI-----------FNESLTANDPDFLATSDLLLV   69 (291)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCE-----------EEEEEEESCHHHHHTCSEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCC-----------CCCEEECCHHHHHCCCCEEEE
T ss_conf             959998689889999999997898399996798999887522557620-----------275140684686125882899


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCC-EEEEECCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHCCCCE
Q ss_conf             488853322234545899999998751-47996-8999727982689999986732795227752767623455305886
Q batch____        80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYA-VMVIKSTVPVGFTAAMHKKYRTENIIFSPEFLREGKALYDNLHPSR  157 (388)
Q Consensus        80 ~vpt~~~~~~~~~~~~~v~~~~~~i~~-l~~g~-ivV~~STV~pgtt~~l~~~~~~~~v~~~Pe~~~~G~a~~~~~~~~r  157 (388)
                      |+|+           ..+..+...+.. +.+++ ++...+++.+.........-...++.+.+.+..++........+..
T Consensus        70 ~v~~-----------~~~~~vl~~~~~~l~~~~~ii~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (291)
T c1ks9A_          70 TLKA-----------WQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITH  138 (291)
T ss_dssp             CSCG-----------GGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEE
T ss_pred             EECH-----------HHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCEEEECCCCCEE
T ss_conf             6281-----------68999997520234899779998789987999975212311542687664259814773598389


Q ss_pred             EEECCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHH
Q ss_conf             99827917999999999875305895899629678899999998899999999------------------999999999
Q batch____       158 IVIGERSERAERFAALLQEGAIKQNIPMLFTDSTEAEAIKLFANTYLAMRVAY------------------FNELDSYAE  219 (388)
Q Consensus       158 iv~G~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~AE~~Kl~~N~~~~~~Ia~------------------~NE~~~l~e  219 (388)
                      +..++.+....+....+.......  ..+..++..++..|++.|.......++                  ++|+..+++
T Consensus       139 i~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~v~~  216 (291)
T c1ks9A_         139 IGPARQQDGDYSYLADILQTVLPD--VAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIE  216 (291)
T ss_dssp             EEESSGGGTTCTHHHHHHHTTSSC--EEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCHHHHHHHHHHHHHCCCC--EEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf             997079988999999998516996--899838179999899984666799999577748885177589999999999999


Q ss_pred             HHC--CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH--------------HHHHHHHCCCCCHHHHHHHHH
Q ss_conf             809--998999998237887686666884112776210138--------------999986116680589999999
Q batch____       220 SLG--LNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDT--------------KQLLANYQSVPNNLISAIVDA  279 (388)
Q Consensus       220 ~~G--iD~~~V~~~~~~~~rig~~~~~PG~G~GG~ClpkD~--------------~~l~~~~~~~~~~l~~~~~~~  279 (388)
                      +.|  .+.....+.+..-.        +..+...++..+|.              ..-+++..+++.|++++..+.
T Consensus       217 a~g~~~~~~~~~~~~~~~~--------~~~~~~~~sm~~D~~~~~~~e~d~~~g~~~~la~~~gv~~P~~~~l~~~  284 (291)
T c1ks9A_         217 REGHHTSAEDLRDYVMQVI--------DATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVPENTRLFEM  284 (291)
T ss_dssp             HHTCCCCHHHHHHHHHHHH--------HHTTTCCCHHHHHHHTTCCCSGGGTHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred             HCCCCCCHHHHHHHHHHHH--------CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             7299888466999999973--------5788877638999974995307999999999998828985079999999