17/01/2012 00:12:09 : INFO  : Run start: Tue Jan 17 00:12:07 GMT 2012
17/01/2012 00:12:18 : INFO  : Initialised job
17/01/2012 00:12:21 : INFO  : Renaming log file 'phyre2_20120117_001207.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/bb022393da07d744/phyre_20120117_001207.log'
17/01/2012 00:12:23 : INFO  : Initialised job:
Sequence
>batch____
MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVYVFAIMMVAYY
AGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIA
FVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGA
IMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIKTYH

17/01/2012 00:12:25 : INFO  : Checked sequence
17/01/2012 00:12:29 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 00:12:31 : INFO  : PSI-BLAST 3 iterations
17/01/2012 00:14:09 : INFO  : PSI-BLAST 5 iterations
17/01/2012 00:16:02 : INFO  : Finished PSI-BLAST
17/01/2012 00:16:05 : INFO  : Running Buildali to generate a3m file
17/01/2012 00:24:45 : INFO  : Converting to HMM
17/01/2012 00:24:49 : INFO  : Calibrating HMM
17/01/2012 00:25:08 : INFO  : Searching HMM database
17/01/2012 00:29:17 : INFO  : Finished buildali
17/01/2012 00:29:22 : INFO  : Predicting secondary structure
17/01/2012 00:29:36 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 00:29:39 : INFO  : Predicting Disordered regions
17/01/2012 00:29:45 : INFO  : Predicted Disorder (Disopred)
17/01/2012 00:29:48 : INFO  : Running memsat_svm check
17/01/2012 00:33:59 : INFO  : Running memsat_svm full
17/01/2012 00:38:25 : INFO  : Predicted Transmembrane (memsat_svm) ID 'bb022393da07d744'
17/01/2012 00:38:29 : INFO  : Initialising fold library search
17/01/2012 00:38:38 : INFO  : Initialised search input
17/01/2012 00:38:42 : INFO  : Building Ensemble models
17/01/2012 00:38:50 : INFO  : Building hh.c3aqpB_.model.1.pdb
17/01/2012 00:39:23 : INFO  : Building hh.c3k07A_.model.2.pdb
17/01/2012 00:39:47 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/bb022393da07d744/hh.c3k07A_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/bb022393da07d744/c3k07A_.2.pdb
17/01/2012 00:39:55 : INFO  : Building c3aqpB_.1.pdb
17/01/2012 00:40:25 : INFO  : Building c3k07A_.2.pdb
17/01/2012 00:40:53 : INFO  : Building c1oy8A_.3.pdb
17/01/2012 00:41:23 : INFO  : Building c2vv5D_.4.pdb
17/01/2012 00:41:53 : INFO  : Building c1hjiB_.5.pdb
17/01/2012 00:42:22 : INFO  : Building d2nn6h3.6.pdb
17/01/2012 00:42:50 : INFO  : Building d2vv5a3.7.pdb
17/01/2012 00:43:19 : INFO  : Building d1iwga8.8.pdb
17/01/2012 00:43:54 : INFO  : Building c2l0eA_.9.pdb
17/01/2012 00:44:23 : INFO  : Building c1ovxB_.10.pdb
17/01/2012 00:44:53 : INFO  : Building d2ds5a1.11.pdb
17/01/2012 00:45:23 : INFO  : Building d1pv7a_.12.pdb
17/01/2012 00:45:53 : INFO  : Building d1iwga7.13.pdb
17/01/2012 00:46:28 : INFO  : Building c2k1lB_.14.pdb
17/01/2012 00:46:57 : INFO  : Building c2k1kB_.15.pdb
17/01/2012 00:47:25 : INFO  : Building c2k1lA_.16.pdb
17/01/2012 00:47:52 : INFO  : Building c2k1kA_.17.pdb
17/01/2012 00:48:20 : INFO  : Building c1qcrD_.18.pdb
17/01/2012 00:48:42 : INFO  : Building c2ds8A_.19.pdb
17/01/2012 00:49:15 : INFO  : Building c2jp3A_.20.pdb
17/01/2012 00:50:47 : INFO  : Finished HH model building
17/01/2012 00:50:51 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 00:53:39 : INFO  : html domain output complete ID 'bb022393da07d744'
17/01/2012 01:01:32 : INFO  : Run end  : Tue Jan 17 01:01:30 GMT 2012
