BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (207 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P64588 Uncharacterized protein yqjI n=110 Tax=Enterobac... 424 e-117 UniRef50_C1F449 Transcriptional regulator, PadR family n=1 Tax=A... 130 3e-29 UniRef50_Q2L0P7 PadR-family transcriptional regulator n=1 Tax=Bo... 124 2e-27 UniRef50_C6XLJ9 Transcriptional regulator, PadR-like family n=1 ... 122 8e-27 UniRef50_C8QBP6 Transcriptional regulator, PadR-like family n=1 ... 120 2e-26 UniRef50_D2LBL1 Transcriptional regulator, PadR-like family n=1 ... 113 5e-24 UniRef50_A6SZ38 Transcriptional regulator n=1 Tax=Janthinobacter... 110 4e-23 UniRef50_B4ETU0 PadR-family transcriptional regulator n=6 Tax=En... 109 7e-23 UniRef50_C5CTL4 Transcriptional regulator, PadR-like family n=2 ... 108 1e-22 UniRef50_D0XSD8 Transcriptional regulator, PadR-like family n=1 ... 106 4e-22 UniRef50_B8GI45 Transcriptional regulator, PadR-like family n=2 ... 102 9e-21 UniRef50_C7JI60 Transcriptional regulator PadR n=10 Tax=Proteoba... 100 2e-20 UniRef50_Q21BY2 Transcriptional regulator, PadR family n=5 Tax=A... 100 3e-20 UniRef50_B1M5I1 Transcriptional regulator, PadR-like family n=7 ... 100 4e-20 UniRef50_C6RKQ8 PadR-family transcriptional regulator n=3 Tax=Ac... 98 1e-19 UniRef50_B6IW77 Transcriptional regulator, PadR family protein n... 97 3e-19 UniRef50_A4TIE6 Transcriptional regulator, PadR family n=33 Tax=... 97 4e-19 UniRef50_Q0FKV2 Transcriptional Regulator, PadR-like family prot... 96 1e-18 UniRef50_Q2NCW1 Putative transcriptional regulator n=4 Tax=cellu... 96 1e-18 UniRef50_B2I0Y1 Predicted transcriptional regulator n=12 Tax=Aci... 95 1e-18 UniRef50_C8Q5D9 Transcriptional regulator, PadR-like family n=1 ... 95 1e-18 UniRef50_A8IL86 Transcriptional regulator n=8 Tax=Rhizobiales Re... 89 7e-17 UniRef50_A5EFD0 Transcriptional regulator, PadR family n=2 Tax=B... 89 7e-17 UniRef50_B4DB33 Transcriptional regulator, PadR-like family n=1 ... 88 1e-16 UniRef50_D2M8Y5 Transcriptional regulator, PadR-like family n=1 ... 88 2e-16 UniRef50_B4W6A1 Transcriptional regulator, PadR family protein n... 87 3e-16 UniRef50_C5QNA0 PadR family transcriptional regulator n=4 Tax=St... 87 4e-16 UniRef50_Q1AYM9 Transcriptional regulator, PadR family n=1 Tax=R... 87 4e-16 UniRef50_B9J7W6 Transcriptional regulator protein n=9 Tax=Rhizob... 87 5e-16 UniRef50_C8SSA8 Transcriptional regulator, PadR-like family n=2 ... 86 6e-16 UniRef50_C5SJF5 Transcriptional regulator, PadR-like family n=1 ... 86 6e-16 UniRef50_D1NZ20 Transcriptional regulator, PadR family n=1 Tax=P... 85 1e-15 UniRef50_Q2G591 Transcriptional regulator, PadR family n=2 Tax=S... 82 1e-14 UniRef50_C6NX27 Transcriptional regulator, PadR-like family n=1 ... 80 4e-14 UniRef50_B2PUN1 Putative uncharacterized protein n=1 Tax=Provide... 80 5e-14 UniRef50_A9GIC6 Transcriptional regulator, PadR family n=1 Tax=S... 80 6e-14 UniRef50_B2TFG8 Transcriptional regulator, PadR-like family n=67... 78 2e-13 UniRef50_C5AKR8 Putative uncharacterized protein n=1 Tax=Burkhol... 78 2e-13 UniRef50_D1YXU7 PadR-like family transcriptional regulator n=2 T... 74 2e-12 UniRef50_B2Q1E3 Putative uncharacterized protein n=3 Tax=Provide... 74 2e-12 UniRef50_A5FQF6 Transcriptional regulator, PadR family n=2 Tax=D... 74 3e-12 UniRef50_C2AQN6 Predicted transcriptional regulator n=1 Tax=Tsuk... 72 1e-11 UniRef50_D1A5M7 Transcriptional regulator, PadR-like family n=1 ... 72 2e-11 UniRef50_D1VPN8 Transcriptional regulator, PadR-like family n=1 ... 71 2e-11 UniRef50_B2IKL6 Transcriptional regulator, PadR-like family n=2 ... 71 3e-11 UniRef50_Q4ZPG6 Transcriptional regulator PadR-like n=13 Tax=Pse... 71 3e-11 UniRef50_A3IWR1 Putative uncharacterized protein n=1 Tax=Cyanoth... 71 3e-11 UniRef50_C6WET7 Transcriptional regulator, PadR-like family n=11... 70 4e-11 UniRef50_B2UHK8 Transcriptional regulator, PadR-like family n=5 ... 70 6e-11 UniRef50_Q137X5 Transcriptional regulator, PadR family n=2 Tax=R... 69 7e-11 UniRef50_D2B5F1 Transcriptional regulator protein-like protein n... 69 1e-10 UniRef50_UPI000050FEE8 transcriptional regulator n=1 Tax=Breviba... 68 2e-10 UniRef50_A1R8I7 Putative transcriptional regulator, PadR family ... 66 7e-10 UniRef50_A8M728 Transcriptional regulator, PadR-like family n=1 ... 66 7e-10 UniRef50_Q4J6E8 Transcriptional regulator PadR-like family n=2 T... 66 9e-10 UniRef50_D1BI54 Predicted transcriptional regulator n=1 Tax=Sang... 65 1e-09 UniRef50_C1YU51 Predicted transcriptional regulator n=1 Tax=Noca... 65 1e-09 UniRef50_A4WHQ6 Transcriptional regulator, PadR family n=5 Tax=T... 65 1e-09 UniRef50_A0Q9V4 Transcriptional regulator, PadR family protein n... 65 1e-09 UniRef50_Q3SN82 Transcriptional regulator, PadR family n=3 Tax=N... 65 2e-09 UniRef50_B5GFD7 Putative uncharacterized protein n=4 Tax=Strepto... 65 2e-09 UniRef50_Q8NLG3 Predicted transcriptional regulators n=4 Tax=Cor... 64 4e-09 UniRef50_B9KC28 Transcriptional regulator, PadR family n=1 Tax=T... 64 4e-09 UniRef50_B5IFX4 Transcriptional regulator, PadR family protein n... 64 4e-09 UniRef50_C3JSU7 Transcriptional regulator, PadR family n=1 Tax=R... 64 4e-09 UniRef50_B8H9F8 Transcriptional regulator, PadR-like family n=3 ... 63 5e-09 UniRef50_Q4C4V0 Transcriptional regulator PadR-like n=1 Tax=Croc... 63 5e-09 UniRef50_Q0S0L1 Possible transcriptional regulator n=3 Tax=Nocar... 63 5e-09 UniRef50_UPI0001C3245B transcriptional regulator, PadR-like fami... 63 6e-09 UniRef50_A5IKC3 Transcriptional regulator, PadR family n=5 Tax=T... 63 8e-09 UniRef50_Q7NV79 Putative uncharacterized protein n=1 Tax=Chromob... 62 1e-08 UniRef50_B4SHM6 Transcriptional regulator, PadR-like family n=3 ... 62 1e-08 UniRef50_B8HG13 Transcriptional regulator, PadR-like family n=4 ... 62 1e-08 UniRef50_C1RLJ9 Transcriptional regulator, PadR family n=1 Tax=C... 62 1e-08 UniRef50_B2IYD3 Transcriptional regulator, PadR-like family n=4 ... 62 2e-08 UniRef50_A4YF39 Transcriptional regulator, PadR family n=2 Tax=S... 61 2e-08 UniRef50_A4YE88 Transcriptional regulator, PadR family n=1 Tax=M... 61 2e-08 UniRef50_B0RN88 Transcriptional regulator, PadR-like family n=5 ... 60 3e-08 UniRef50_D2PQ95 Transcriptional regulator, PadR-like family n=2 ... 60 4e-08 UniRef50_Q47SG6 Transcriptional regulator, PadR family n=1 Tax=T... 60 4e-08 UniRef50_A9WKS9 Transcriptional regulator PadR-like family n=1 T... 60 6e-08 UniRef50_D1AC56 Transcriptional regulator, PadR-like family n=1 ... 60 6e-08 UniRef50_C7P8R4 Transcriptional regulator, PadR-like family n=1 ... 59 7e-08 UniRef50_D2PES9 Transcriptional regulator PadR family protein n=... 59 8e-08 UniRef50_C3MJS4 Transcriptional regulator PadR family protein n=... 59 9e-08 UniRef50_B1L3Y8 Transcriptional regulator, PadR-like family n=1 ... 59 1e-07 UniRef50_C7QEY5 Transcriptional regulator, PadR-like family n=1 ... 59 1e-07 UniRef50_C5A2S9 Transcription regulator, PadR-like family n=4 Ta... 59 1e-07 UniRef50_A1S018 Transcriptional regulator, PadR family n=1 Tax=T... 58 2e-07 UniRef50_C5C5Y5 Transcriptional regulator, PadR-like family n=1 ... 58 2e-07 UniRef50_UPI000038E215 transcriptional regulator n=1 Tax=Ferropl... 58 2e-07 UniRef50_Q9YC94 Putative transcriptional regulator, PadR family ... 57 3e-07 UniRef50_D1ACF2 Transcriptional regulator, PadR-like family n=1 ... 57 4e-07 UniRef50_A8MBR3 Transcriptional regulator, PadR-like family n=1 ... 57 4e-07 UniRef50_A4G020 Transcriptional regulator, PadR family n=4 Tax=M... 57 4e-07 UniRef50_D1SPJ9 Transcriptional regulator, PadR-like family n=1 ... 57 5e-07 UniRef50_Q6KZ78 Transcriptional regulator n=1 Tax=Picrophilus to... 56 8e-07 UniRef50_A6W6T2 Transcriptional regulator, PadR-like family n=1 ... 55 1e-06 UniRef50_C7LZY3 Transcriptional regulator, PadR-like family n=1 ... 55 1e-06 UniRef50_D2AYZ8 Transcriptional regulator protein-like protein n... 55 1e-06 UniRef50_Q977Z7 Putative uncharacterized protein TVG1573729 n=2 ... 55 1e-06 UniRef50_A4WJU8 Transcriptional regulator, PadR family n=4 Tax=T... 55 2e-06 UniRef50_C8XGD0 Transcriptional regulator, PadR-like family n=1 ... 55 2e-06 UniRef50_A1SQM2 Transcriptional regulator, PadR family n=1 Tax=N... 54 2e-06 UniRef50_D1X4A7 Transcriptional regulator, PadR-like family n=8 ... 53 6e-06 UniRef50_A7HN08 Transcriptional regulator, PadR-like family n=1 ... 53 6e-06 UniRef50_C7QBA1 Transcriptional regulator, PadR-like family n=1 ... 52 9e-06 UniRef50_Q2FP38 Transcriptional regulator, PadR family n=1 Tax=M... 52 1e-05 UniRef50_Q9RTB9 Putative uncharacterized protein n=2 Tax=Deinoco... 52 1e-05 UniRef50_D1XDB7 Transcriptional regulator, PadR-like family n=8 ... 52 1e-05 UniRef50_Q465T5 Transcriptional regulator, PadR family n=1 Tax=M... 52 1e-05 UniRef50_A4YGH7 Transcriptional regulator, PadR family n=1 Tax=M... 51 2e-05 UniRef50_B8D3Z1 Transcriptional regulator, PadR-like family n=1 ... 50 4e-05 UniRef50_D0LFT7 Transcriptional regulator, PadR-like family n=1 ... 50 5e-05 UniRef50_A8LAZ7 Transcriptional regulator, PadR-like family n=9 ... 50 6e-05 UniRef50_B0R6W2 Putative uncharacterized protein n=2 Tax=Halobac... 49 9e-05 UniRef50_A9WPK9 Transcriptional regulator, PadR family protein n... 48 2e-04 UniRef50_B9LRB4 Transcriptional regulator, PadR-like family n=4 ... 48 2e-04 UniRef50_A6URE9 Transcriptional regulator, PadR-like family n=1 ... 48 2e-04 UniRef50_A1RWE5 Transcriptional regulator, PadR family n=1 Tax=T... 48 3e-04 UniRef50_C4RQF7 PadR-family transcriptional regulator n=2 Tax=Mi... 47 3e-04 UniRef50_A7I725 Transcriptional regulator, PadR-like family n=1 ... 47 4e-04 UniRef50_Q97A48 Putative uncharacterized protein TVG0986825 n=1 ... 46 6e-04 UniRef50_A0RKG2 Transcriptional regulator, PadR family n=50 Tax=... 46 6e-04 UniRef50_A0RYA5 Transcriptional regulator n=3 Tax=Thaumarchaeota... 46 7e-04 UniRef50_B0NZB0 Putative uncharacterized protein n=3 Tax=Firmicu... 46 9e-04 UniRef50_A9A325 Transcriptional regulator, PadR-like family n=1 ... 45 0.001 UniRef50_Q2RGC9 Transcriptional regulator, PadR family n=3 Tax=B... 45 0.001 UniRef50_B9XHE1 Transcriptional regulator, PadR-like family n=2 ... 45 0.001 UniRef50_D1YY91 Putative PadR-like family transcriptional regula... 45 0.002 UniRef50_Q2BFH1 Putative uncharacterized protein n=1 Tax=Bacillu... 45 0.002 UniRef50_B2A0I7 Transcriptional regulator, PadR-like family n=1 ... 45 0.002 UniRef50_Q2FNW6 Transcriptional regulator, PadR family n=1 Tax=M... 45 0.002 UniRef50_Q9RT15 Putative uncharacterized protein n=1 Tax=Deinoco... 45 0.002 UniRef50_A6BZG9 Putative uncharacterized protein n=1 Tax=Plancto... 44 0.002 UniRef50_C8Q356 Transcriptional regulator, PadR-like family n=1 ... 44 0.002 UniRef50_C3N9F3 Transcriptional regulator, PadR-like family n=11... 44 0.003 UniRef50_C8WGP1 Transcriptional regulator, PadR-like family n=1 ... 44 0.003 UniRef50_B2TNP2 Lineage-specific thermal regulator protein n=1 T... 44 0.004 UniRef50_C5CHI3 Transcriptional regulator, PadR-like family n=1 ... 44 0.004 UniRef50_C4F9Z1 Putative uncharacterized protein n=1 Tax=Collins... 44 0.004 UniRef50_C7DGB3 Transcriptional regulator, PadR-like family n=2 ... 44 0.004 UniRef50_B1L511 Transcriptional regulator, PadR-like family n=1 ... 44 0.004 UniRef50_D1YZ73 PadR-like family transcriptional regulator n=2 T... 43 0.005 UniRef50_Q47QT2 Transcriptional regulator, PadR family n=2 Tax=A... 43 0.006 UniRef50_B3WAQ0 Transcriptional repressor PadR (Regulator of phe... 43 0.006 UniRef50_Q9V0W9 Putative uncharacterized protein n=2 Tax=Pyrococ... 43 0.006 UniRef50_A8L6H3 Transcriptional regulator, PadR-like family n=5 ... 43 0.006 UniRef50_UPI0001C35727 PadR-like family transcriptional regulato... 43 0.006 UniRef50_A4BBA4 Putative uncharacterized protein n=1 Tax=Reineke... 43 0.006 UniRef50_A8M7C7 Transcriptional regulator, PadR-like family n=2 ... 43 0.007 UniRef50_B4D7I1 Transcriptional regulator, PadR-like family n=2 ... 43 0.007 UniRef50_A6LMA8 Transcriptional regulator, PadR-like family n=1 ... 43 0.007 UniRef50_C5CG93 Transcriptional regulator, PadR-like family n=1 ... 43 0.007 UniRef50_C7QKF8 Transcriptional regulator, PadR-like family n=4 ... 43 0.007 UniRef50_B5IBP0 Transcriptional regulator, PadR family, putative... 43 0.008 UniRef50_A7IME8 Transcriptional regulator, PadR-like family n=2 ... 43 0.008 UniRef50_Q0W129 Predicted transcription regulator (PadR-like fam... 43 0.008 UniRef50_B0TAS3 Transcriptional regulator, padr family, putative... 43 0.009 UniRef50_C6A0Y4 Transcription regulator, PadR-like family n=7 Ta... 42 0.011 UniRef50_A8AAT8 Transcriptional regulator, PadR family n=1 Tax=I... 42 0.013 UniRef50_B0MSB8 Putative uncharacterized protein n=1 Tax=Eubacte... 42 0.014 UniRef50_C8VZL9 Transcriptional regulator, PadR-like family n=2 ... 42 0.016 UniRef50_C1QEA4 Transcriptional regulator, PadR family n=1 Tax=B... 42 0.016 UniRef50_Q08UR2 Putative transcriptional regulator n=1 Tax=Stigm... 42 0.018 UniRef50_D1S466 Transcriptional regulator, PadR-like family n=1 ... 42 0.019 UniRef50_Q1AUC4 Transcriptional regulator, PadR family n=1 Tax=R... 41 0.020 UniRef50_Q6L022 Hypothetical transcriptional regulatory protein ... 41 0.022 UniRef50_Q9V1D5 Predicted transcriptional regulator n=2 Tax=Eury... 41 0.024 UniRef50_B5YBF9 Transcriptional regulator, PadR family, putative... 41 0.031 UniRef50_C9AC80 PadR family transcriptional regulator n=4 Tax=En... 41 0.032 UniRef50_D2QHL5 Transcriptional regulator, PadR-like family n=1 ... 41 0.032 UniRef50_UPI0001B57518 PadR family transcriptional regulator n=1... 41 0.033 UniRef50_Q5WGK7 Putative uncharacterized protein n=1 Tax=Bacillu... 40 0.034 UniRef50_C3B6A2 Transcriptional regulator n=3 Tax=Bacillales Rep... 40 0.036 UniRef50_C5CF63 Transcriptional regulator, PadR-like family n=1 ... 40 0.039 UniRef50_A2BMT4 Predicted transcriptional regulator n=1 Tax=Hype... 40 0.040 UniRef50_B7K746 Transcriptional regulator, PadR-like family n=3 ... 40 0.044 UniRef50_C7PGF5 Transcriptional regulator, PadR-like family n=1 ... 40 0.046 UniRef50_B8FGB8 Transcriptional regulator, PadR-like family n=1 ... 40 0.046 UniRef50_C6QCV1 Transcriptional regulator, PadR-like family n=1 ... 40 0.047 UniRef50_A8SUL2 Putative uncharacterized protein n=1 Tax=Coproco... 40 0.050 UniRef50_B8I8C9 Transcriptional regulator, PadR-like family n=12... 40 0.051 UniRef50_C7N786 Transcriptional regulator, PadR family n=6 Tax=B... 40 0.056 UniRef50_A2TYI9 Transcriptional regulator PadR-like family n=7 T... 40 0.071 UniRef50_B1I0V4 Transcriptional regulator, PadR-like family n=1 ... 39 0.076 UniRef50_A3PWG0 Transcriptional regulator, PadR family n=16 Tax=... 39 0.081 UniRef50_D2ART9 Transcriptional regulator protein-like protein n... 39 0.083 UniRef50_A7VVC7 Putative uncharacterized protein n=1 Tax=Clostri... 39 0.084 UniRef50_A8VWB0 FAD dependent oxidoreductase n=3 Tax=Firmicutes ... 39 0.089 UniRef50_C7MFQ8 Predicted transcriptional regulator n=16 Tax=Bac... 39 0.092 >UniRef50_P64588 Uncharacterized protein yqjI n=110 Tax=Enterobacteriaceae RepID=YQJI_ECOLI Length = 207 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH 60 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH Sbjct: 1 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH 60 Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG Sbjct: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN Sbjct: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQLD 207 QSDISDAQIKKIIAVIDRAAFDITQLD Sbjct: 181 QSDISDAQIKKIIAVIDRAAFDITQLD 207 >UniRef50_C1F449 Transcriptional regulator, PadR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F449_ACIC5 Length = 191 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/205 (40%), Positives = 110/205 (53%), Gaps = 20/205 (9%) Query: 3 HHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRG-GGRRQRFFGHG 61 H HE H G+ RH G H G G G RG GG R+R F +G Sbjct: 6 HDHE---DHPGRERHRG---------RHGGFGEYF-------GNFERGFGGGRERMFDNG 46 Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ELRLVIL IL++ S+GYE+IK IE G Y+PSPGV+YPTL L+E+ + EG Sbjct: 47 ELRLVILQILAKKPSYGYEIIKEIEEQLAGAYSPSPGVVYPTLTMLEEEGYAVVASTEGN 106 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK+ A TEQG +L++N+ +E I R++ + PQ+ RA+ N K L +R Sbjct: 107 KKRYAATEQGLAYLKQNQGILEGIGHRMEKMGKAYGRERAPQIMRAIMNLKFALKVRARS 166 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 +S QI+KI ID AA I ++ Sbjct: 167 GKLSPEQIRKIAEAIDAAARVIDEV 191 >UniRef50_Q2L0P7 PadR-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2L0P7_BORA1 Length = 167 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/154 (42%), Positives = 98/154 (63%), Gaps = 5/154 (3%) Query: 50 GGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQE 109 GG RR+R F G +RL+ L IL+ HGYE+I+AI L G+Y+PSPG IYPTL L++ Sbjct: 16 GGRRRERVFPPGAIRLLALSILASQPCHGYEVIRAIGALVGGDYSPSPGTIYPTLALLED 75 Query: 110 QSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALD 169 L T + G+KQ +T G Q L+ + E + ER++ R + PQ++RA++ Sbjct: 76 MGLATASVLDDGRKQYRITPAGQQHLDAHAEDL----ERVRRRLAQERPARPPQLQRAIE 131 Query: 170 NFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 NF+A L LR+ ++D A ++++IA+IDRAA DI Sbjct: 132 NFRAALRLRL-EADRDAATLERVIAIIDRAAVDI 164 >UniRef50_C6XLJ9 Transcriptional regulator, PadR-like family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ9_HIRBI Length = 199 Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 98/167 (58%), Gaps = 6/167 (3%) Query: 44 GGRHG---RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI 100 G RH R GGRR R F ELRLV+L +S + HGY+LI+AIE + G+Y PSPGV+ Sbjct: 35 GHRHASMRRNGGRR-RVFDAAELRLVLLHFISTNPKHGYDLIRAIEEHSGGSYAPSPGVV 93 Query: 101 YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 YP L L++ I+ ++EEGGKK ++T G L+ E + +R+++ R Sbjct: 94 YPALSMLEDIGFISAQQEEGGKKAFSITPDGESELQTQSETTSSLLQRLES-LASEHGRL 152 Query: 161 NPQ-MKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 NP +KRA++N K L R+ QSD +DA I A+ID A I +L Sbjct: 153 NPAPVKRAMENIKTALRNRMTQSDATDATALDIAAIIDEATHKIERL 199 >UniRef50_C8QBP6 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8QBP6_9ENTR Length = 179 Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 99/173 (57%), Gaps = 4/173 (2%) Query: 33 HGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGN 92 HG + C G R R R+R ++RL++L L++ D+HGYELIK++E L++G Sbjct: 10 HGDHAQRAFCAGARKKR----RERMLDASDIRLLMLHFLAQSDAHGYELIKSVEELSKGE 65 Query: 93 YTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 Y+PSPG+IYP L L+E I + + + +K L + G L ENRE V+ I R+ + Sbjct: 66 YSPSPGIIYPNLTLLEETDAIRVVDAQESRKAYTLNDSGRALLAENRENVDTIIGRLTSL 125 Query: 153 CVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + R P +++A+ N K L+ R+ Q +IS+ + +IA ++ AA I + Sbjct: 126 AILVNNRSIPAVEQAIHNIKFTLNHRLAQENISEEALDIVIAALNEAAEKIAK 178 >UniRef50_D2LBL1 Transcriptional regulator, PadR-like family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBL1_RHOVA Length = 177 Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 1/144 (0%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G+LR ++LD++ HGYE+IKAIE+ G YTPSPGVIYPTL L+E LI + E + Sbjct: 32 QGDLRWLVLDLIGEQPRHGYEIIKAIEDAFNGAYTPSPGVIYPTLTLLEETGLI-VGETQ 90 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G KK +LT+QG L ++V + R++ P+M RA+DN +A + +R+ Sbjct: 91 GAKKLYSLTDQGRAELAARVQEVTAVRGRLEEARARFGANPAPEMIRAMDNLRAAVQVRL 150 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 ++ +S ++ I +DRAA +I Sbjct: 151 SKGPLSPEAVQVITGALDRAASEI 174 >UniRef50_A6SZ38 Transcriptional regulator n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZ38_JANMA Length = 187 Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 63/153 (41%), Positives = 100/153 (65%), Gaps = 3/153 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LR V+L ++S SHGYELIK+IE G Y+PSPG +YPTL L+E SL+++ Sbjct: 35 IFGHGGLRFVLLHLISEKASHGYELIKSIEERLGGAYSPSPGTVYPTLTLLEELSLLSVE 94 Query: 117 E-EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--QNPQMKRALDNFKA 173 E ++GG+K+ +T+ G ++L+E+RE V+ + R+ GA R + PQ+KRA++N K Sbjct: 95 EADQGGRKRYQITDAGLRYLDEHREMVDAMLLRLNGGVDGAGPRGGRPPQVKRAIENLKL 154 Query: 174 VLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +R++ ++ Q A++DRAA + Q+ Sbjct: 155 AMRMRLSGETLTQEQANAFAAILDRAAQQLEQI 187 >UniRef50_B4ETU0 PadR-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=B4ETU0_PROMH Length = 271 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 74/235 (31%), Positives = 118/235 (50%), Gaps = 38/235 (16%) Query: 4 HHEG----CCKHEGQPRHEG---CCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRR-- 54 HH G CC E EG CC+ + HEH H EHG CC G + G+R Sbjct: 33 HHNGNNEHCCHGERGHHQEGHGKCCQQGEQSHEHNDHA---EHG-CCHGEKQQEHGKRHG 88 Query: 55 -----------------QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSP 97 +R F HG+LR+++L +++ SHGYE+I+ I+ + G Y PSP Sbjct: 89 RGCGAGKGKGRGQGRQLKRMFDHGDLRVLLLSMIAAKPSHGYEIIRGIDEASSGLYVPSP 148 Query: 98 GVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 GVIYPTL L+EQ L+ E G+K ++T +G+ +L EN+E + I+ ++ Sbjct: 149 GVIYPTLTLLEEQDLVVANIAEKGRKNYSITPEGSAFLAENQETEKNIQNKL---AYARD 205 Query: 158 LRQNP-----QMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 L QN +++ A+ KAVL ++ +S + ++I +++ A I ++ Sbjct: 206 LSQNAGGVSEEIEFAVGKLKAVLRHKLVLKQLSVEKAQRIAFILNEAVEKIEAIN 260 >UniRef50_C5CTL4 Transcriptional regulator, PadR-like family n=2 Tax=Comamonadaceae RepID=C5CTL4_VARPS Length = 203 Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 88/141 (62%), Gaps = 3/141 (2%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR-EEEGG 121 LR V+L +++ +HGYELIKAIE+ G+Y PSPGV+YPTL L+E +++ + GG Sbjct: 57 LRFVLLQLIADKPAHGYELIKAIEDRLGGSYAPSPGVVYPTLTLLEEMGYLSVEMADTGG 116 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--QNPQMKRALDNFKAVLDLRV 179 +K+ ++T G ++L NR+ + + R+ GA R + PQ+ RA++N K + +R+ Sbjct: 117 RKRYSITASGREFLAANRDTADAMMARMSGGVDGAGPRGGRPPQVTRAIENLKLAMRMRL 176 Query: 180 NQSDISDAQIKKIIAVIDRAA 200 + + +++ Q AV+D AA Sbjct: 177 SGTPLTEQQAHDFAAVLDSAA 197 >UniRef50_D0XSD8 Transcriptional regulator, PadR-like family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XSD8_9CAUL Length = 213 Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 7/152 (4%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FG G+LRLV+L ++ ++ HGY+LIKAIE G Y PSPGV+YPTL L ++ LI Sbjct: 65 MFGPGDLRLVLLALIEQEPRHGYDLIKAIETAFGGGYAPSPGVVYPTLSLLADEGLIAGV 124 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEER--IKARCVGAALRQNPQMKR-ALDNFKA 173 E+ GK+ LT G WL+ENR V+ + +R + AR V Q P++ R A + Sbjct: 125 EDTSGKRIFTLTPAGQTWLDENRTAVDGVMQRMALAARLVSG--EQTPEVVREAFHTLRH 182 Query: 174 VLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + ++ + S+A+ +++ + RA DI++ Sbjct: 183 AVQMK--PGNWSEAETARVVEALMRAVRDISE 212 >UniRef50_B8GI45 Transcriptional regulator, PadR-like family n=2 Tax=Methanosphaerula palustris E1-9c RepID=B8GI45_METPE Length = 238 Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 88/150 (58%), Gaps = 1/150 (0%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G+++L IL++LS S+GY++IK +E G Y PSPGVIYPTL L+E+ L T+ Sbjct: 90 LFDAGDIKLAILNLLSEQPSYGYQIIKTMEQRLAGGYAPSPGVIYPTLTMLEEEGLATV- 148 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 EG KK ++T +G Q+L+ + E+V+ + ER++ G ++P++ +A N + Sbjct: 149 SLEGSKKVYSVTPEGMQYLQTHEERVKELFERLEEAGRGFQHGRSPELMKAFKNLHGAVM 208 Query: 177 LRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 R+ + + + QI I ++ AA I L Sbjct: 209 ARLLRGNATPEQISTIAETMNAAARTIDDL 238 >UniRef50_C7JI60 Transcriptional regulator PadR n=10 Tax=Proteobacteria RepID=C7JI60_ACEP3 Length = 196 Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 62/154 (40%), Positives = 88/154 (57%), Gaps = 6/154 (3%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F +GE+RL++L ++S ++GYELIK IE G+YTPSPGVIYPTL +L+E IR Sbjct: 45 LFDYGEIRLLVLKMISEKPTYGYELIKDIEEKFGGSYTPSPGVIYPTLTWLEEAGY--IR 102 Query: 117 EEEG-GKKQIALTEQGAQWLEENREQVEMIEERI-KARCVGAALRQNPQMK--RALDNFK 172 +G +K +T +G +L NR +E I R A G R+N M R ++N K Sbjct: 103 SADGESRKNYQITPEGEAFLSANRVGLEEILSRTAAAEPEGRGGRKNIPMPVMRGMENLK 162 Query: 173 AVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 L LR+ + A +KI A++D AA I Q+ Sbjct: 163 TALRLRLRNGGLDLAAEEKIAALLDEAARGIGQV 196 >UniRef50_Q21BY2 Transcriptional regulator, PadR family n=5 Tax=Alphaproteobacteria RepID=Q21BY2_RHOPB Length = 215 Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 1/146 (0%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 ELRLV+L +++ HGY+LI+A+E LT G Y PSPG++YPTL L + LI + EG Sbjct: 71 AELRLVLLKLIADKPRHGYDLIRAVEELTGGAYAPSPGIVYPTLTLLSDMGLIAEQSAEG 130 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 +KQ A+T +G L E +V + R++A ++RA+ N ++VL R+ Sbjct: 131 ARKQFAVTPEGTAHLAEQATEVAAMLARLEALGAMRERVDAVPVRRAMHNLRSVLQHRLG 190 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 + + +++ +A+ID AA I +L Sbjct: 191 EG-LDKERLQAAVALIDEAAQKIERL 215 >UniRef50_B1M5I1 Transcriptional regulator, PadR-like family n=7 Tax=Alphaproteobacteria RepID=B1M5I1_METRJ Length = 210 Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 74/130 (56%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 RFF HG+LRLVIL +++ HGYE+IKAIE G Y+PSPG +YPTL L+E +T+ Sbjct: 60 RFFAHGDLRLVILHLIAEKPRHGYEIIKAIEERVGGAYSPSPGTVYPTLTLLEELGHVTV 119 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVL 175 EG K+ +T +G +L+ NR +E I R+ P + RA + K L Sbjct: 120 TPGEGTKRLHTITPEGQAFLDGNRPILEAILARMAEAEAARGDGPPPSVVRAKEGLKLAL 179 Query: 176 DLRVNQSDIS 185 +R+ + +S Sbjct: 180 QMRLARGPLS 189 >UniRef50_C6RKQ8 PadR-family transcriptional regulator n=3 Tax=Acinetobacter RepID=C6RKQ8_ACIRA Length = 176 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 87/153 (56%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 R+ R F G ++L++L ++ + +GYE+IK+I L G Y+PS G IYPTL +L++ Sbjct: 16 SRKSRLFESGHMKLLVLSLIEQAPRYGYEIIKSIGELVGGGYSPSTGTIYPTLSYLEDMQ 75 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNF 171 ++I + +G +KQ +T G L RE +E I R++ R Q + RA+ N Sbjct: 76 FVSIEKPDGDRKQYKITVTGINHLNGQREHLEHILGRLETRREIQNNDQYLDIYRAMANL 135 Query: 172 KAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 K L L++ + +++ I +I ID+AA DI+ Sbjct: 136 KTSLRLKLKNNALTEETIHQIAKSIDQAAVDIS 168 >UniRef50_B6IW77 Transcriptional regulator, PadR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IW77_RHOCS Length = 334 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G+ RL+ L +LS HGYELI+A+ +L G Y+PSPG++YPTL L++ + Sbjct: 81 LLDQGDPRLLALHLLSEKPRHGYELIRAMSDLLGGAYSPSPGMMYPTLSLLEDLGYVARD 140 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 E EGG+K LT GA +LEENR VE +R AR V R P+++ A+D K L Sbjct: 141 ESEGGRKPYTLTPAGALFLEENRPLVETALQR--ARSVRDRHRGIPEVEAAMDGLKRALA 198 Query: 177 LRVNQSDIS 185 R+++ ++ Sbjct: 199 GRLSRPSLT 207 >UniRef50_A4TIE6 Transcriptional regulator, PadR family n=33 Tax=Enterobacteriaceae RepID=A4TIE6_YERPP Length = 226 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 45/94 (47%), Positives = 63/94 (67%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R F HG+LR+V+L +L++ SHGYELIKAIE + G Y PSPGVIYPTL L+EQ +T Sbjct: 57 RLFEHGDLRVVLLALLNKTPSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTP 116 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 G+K +T+ G L++N+ V++I R+ Sbjct: 117 VATGNGRKSYQITDAGKFELQKNQAMVDVIFARL 150 >UniRef50_Q0FKV2 Transcriptional Regulator, PadR-like family protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKV2_9RHOB Length = 180 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 9/150 (6%) Query: 34 GHQHEHGQCCGGRHGRGGGRR--QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQG 91 G H + RH +G +R +R F +GELRL+IL ++++ HGYE+IKAIE G Sbjct: 7 GPARPHAKPSSERH-KGPAKRGPRRLFEYGELRLLILAMIAQSPRHGYEIIKAIEERFNG 65 Query: 92 NYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA 151 Y PSPGVIYP+L +L+E I + +E +K +T +GA ++E NR + + Sbjct: 66 GYCPSPGVIYPSLSWLEEMGYIAVEPDENARKLSRITAEGAAFIEANRTAA----DELLT 121 Query: 152 RCVGAALRQNP--QMKRALDNFKAVLDLRV 179 R + R N ++ A+D+ K L R+ Sbjct: 122 RTIPPNHRANAPEEIVAAMDDIKLALRQRL 151 >UniRef50_Q2NCW1 Putative transcriptional regulator n=4 Tax=cellular organisms RepID=Q2NCW1_ERYLH Length = 222 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/168 (38%), Positives = 90/168 (53%), Gaps = 14/168 (8%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 RR R F GELRL +L +++R+ HGYELI+AIE++T G Y PSPG +YPTL L+E+ Sbjct: 55 RRGRMFAQGELRLALLALIAREPRHGYELIRAIEDMTGGGYAPSPGAVYPTLQLLEEEGQ 114 Query: 113 ITI------------REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA--AL 158 I E GGKK T+ G LEE E+V+ + ER+ A A Sbjct: 115 IKPAKAKGKAKSEGGESETGGKKPFKATKSGKAELEERAEEVDQLMERLGAHGERAERVR 174 Query: 159 RQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 ++P + RA+ N VL +R + I +I+ +ID A I +L Sbjct: 175 EKSPDLFRAMGNLANVLKIRARSGKLDQNTIDQIVDIIDEVAKRIERL 222 >UniRef50_B2I0Y1 Predicted transcriptional regulator n=12 Tax=Acinetobacter RepID=B2I0Y1_ACIBC Length = 183 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 91/150 (60%), Gaps = 2/150 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G ++L++L ++ + HGYE+IK I +L YTPS G IYPTL L+E +LI + Sbjct: 36 LFEAGRMKLLVLHLIQQSPKHGYEIIKEISDLVGDGYTPSAGTIYPTLTSLEEMNLINLL 95 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 + E +KQ +TE G +L E+++++ + E+++ R + Q ++ RA++N K L Sbjct: 96 DVE--RKQYQITEFGEAYLNEHQDKLSGLLEKLRLRREIHSNDQLIEIHRAMENLKTALR 153 Query: 177 LRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 L++N +D+ QI +I ID+AA I +L Sbjct: 154 LKLNTTDLKQEQIYQIAEKIDQAAVAIGRL 183 >UniRef50_C8Q5D9 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8Q5D9_9ENTR Length = 273 Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 3/156 (1%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 GRR R F +GELRL++L I+++ SHGYELI + G Y PSPGV+YP L +L ++ Sbjct: 17 GRRARAFDYGELRLLLLAIIAKQPSHGYELIHEVNERLGGTYKPSPGVLYPALTWLYDRG 76 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ-MKRALDN 170 I E+GG+K+ +T++G +L N+ ++M+ R+ + G ++PQ + A+D+ Sbjct: 77 YAEIDLEKGGRKRYRITDEGNAFLSANKTVIDMLVARVVPKAQGHG--KSPQAIVEAMDH 134 Query: 171 FKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 K L LR ++D + +I +I AA I L Sbjct: 135 LKRALSLRAKMEPVADQVVTRIGEIIHVAANQIEAL 170 >UniRef50_A8IL86 Transcriptional regulator n=8 Tax=Rhizobiales RepID=A8IL86_AZOC5 Length = 228 Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 16/154 (10%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R G+L+L+ L +++ HGYE+IK IE T G Y+PSPGV+YPTL FL+E +T Sbjct: 67 RMLAQGDLKLLALSLIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEEAGYVTA 126 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIK--ARCVGAALRQN------------ 161 E +G KK+ +TE+G +LEEN++ + + R+ VG R Sbjct: 127 -EPDGAKKRFTITEEGRAYLEENKDVADALVGRLSEIGLKVGKMRRWMGKGEEGGEPSGL 185 Query: 162 PQM-KRALDNFKAVLDLRVNQSDISDAQIKKIIA 194 P++ A++N K V ++ ++ ++ +I +I+A Sbjct: 186 PRLVDAAIENLKDVAKAKLAENPRTETRIVEILA 219 >UniRef50_A5EFD0 Transcriptional regulator, PadR family n=2 Tax=Bradyrhizobium RepID=A5EFD0_BRASB Length = 236 Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 5/144 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +LR ++L ++ HGYELIKA+E L G Y+PSPG +YP L L++ I EGG Sbjct: 87 DLRSLLLWLIGEKPRHGYELIKAVEQLVGGAYSPSPGSVYPILSLLEDMGQIEAAASEGG 146 Query: 122 KKQIALTEQGAQWLEENREQVE--MIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 KK A+T+ G Q L+++ +E + RI AR +G P ++ A+ K + L++ Sbjct: 147 KKLFAITDAGRQALKDDAAAIEGLLSRMRIMARTMGGMRPPEPVLQ-AVQTLK--MALKM 203 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 ++ SDA+ ++ ++ RA +I Sbjct: 204 HRPGWSDAEANRVSDILTRAIAEI 227 >UniRef50_B4DB33 Transcriptional regulator, PadR-like family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB33_9BACT Length = 224 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/137 (40%), Positives = 75/137 (54%), Gaps = 20/137 (14%) Query: 25 KSEHEHCGHGHQHEHGQCCGGRHG------------RGGGRRQRFFGHGELRLVILDILS 72 + EH HC H + GRHG G R R F +L+ +IL ++S Sbjct: 11 RGEHPHCAH-------KGFFGRHGGEFFDRFGGGPGGPGFRPGRLFTSEDLQFIILALIS 63 Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGA 132 +HGYE+IK IE + G Y PSPGVIYP L +L+E SL + E EG KK +TE GA Sbjct: 64 AKPAHGYEIIKEIERRSSGVYAPSPGVIYPALTYLEEASL-AVSEAEGAKKLYRITEAGA 122 Query: 133 QWLEENREQVEMIEERI 149 + L +NR+Q + + ER+ Sbjct: 123 EHLAKNRQQTDEMLERL 139 >UniRef50_D2M8Y5 Transcriptional regulator, PadR-like family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8Y5_RHOPA Length = 226 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 18/160 (11%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R R G+L+L+ L +++ HGY++IK IE T G Y PSPGV+YPTL +L+E Sbjct: 36 RAGRMLAQGDLKLIALALIAEQPRHGYDIIKVIEEKTAGWYAPSPGVVYPTLTYLEETGH 95 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN----------- 161 + + + EG KK T++G L NR E + +R+ + G +RQ Sbjct: 96 V-VAQPEGAKKLYVATDEGRDHLAANRALAEAVFDRLAS--FGEMMRQQNGEGAPEAGDL 152 Query: 162 -PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAA 200 P ++ ALDN + V ++ + ++A+ ++A++ RAA Sbjct: 153 PPLLRAALDNLREVAIRQIAKDPDNEAE---LVAILARAA 189 >UniRef50_B4W6A1 Transcriptional regulator, PadR family protein n=2 Tax=Proteobacteria RepID=B4W6A1_9CAUL Length = 217 Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 4/135 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LR V+L +++ SHGYELIKA+E G Y+PSPGVIYP+L L+E + Sbjct: 70 LFDHGTLRWVLLSLIAEKPSHGYELIKAVETRLGGAYSPSPGVIYPSLTLLEEMGALE-S 128 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 + EGGKK ++TE G L EN E + E + ALR ++ A+ + + Sbjct: 129 QTEGGKKLYSITEAGRALLAEN-EAILRAAEATMDKFAARALRPT-AIQDAIGRLRHTIH 186 Query: 177 LRVN-QSDISDAQIK 190 R+ ++ +++AQ++ Sbjct: 187 ARLTGETALTEAQVQ 201 >UniRef50_C5QNA0 PadR family transcriptional regulator n=4 Tax=Staphylococcus RepID=C5QNA0_STAEP Length = 187 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 2/97 (2%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 G RGGGR RFF G L+ VIL +L + HGY++IK +E +G Y PSPG +Y Sbjct: 25 ATGFGSPRGGGR-DRFFKKGNLQFVILKMLKEESRHGYQIIKDLEERFKGFYAPSPGSVY 83 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEEN 138 P L L+++ ++I ++G KK ++TE+G ++LEEN Sbjct: 84 PILQMLEDREFVSI-SKDGKKKVYSITEEGEKFLEEN 119 >UniRef50_Q1AYM9 Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYM9_RUBXD Length = 176 Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 2/103 (1%) Query: 47 HGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDF 106 G G G R+RF G G+L+ VILD+L R +HGY+LIKA+E ++G Y PSPG +YPTL Sbjct: 11 RGSGFGPRRRF-GKGDLKYVILDLLERGPAHGYQLIKALEERSRGLYAPSPGSVYPTLQM 69 Query: 107 LQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 L++ + E+ GKK +TE+G +L E R +E + R Sbjct: 70 LEDMGYVGSSRED-GKKVYQITEEGRGFLRERRRSLEEVWRRF 111 >UniRef50_B9J7W6 Transcriptional regulator protein n=9 Tax=Rhizobium/Agrobacterium group RepID=B9J7W6_AGRRK Length = 227 Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 6/114 (5%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R F +L+L+IL +LS HGYELIK +E + G Y PSPGVIYP L +L+E L + Sbjct: 54 RKFDAADLQLIILALLSEQPRHGYELIKTLEERSGGFYVPSPGVIYPALTYLEETGLAEV 113 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALD 169 E G KK +TE G + +EENRE VE ++ GA + +KRA D Sbjct: 114 -EASGTKKLYRITESGQKRVEENRELVEATLAKL-----GAIGERMAHVKRAFD 161 >UniRef50_C8SSA8 Transcriptional regulator, PadR-like family n=2 Tax=Mesorhizobium RepID=C8SSA8_9RHIZ Length = 229 Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 9/119 (7%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R R G+L+L+ L +L+ HGY++IKA+E T G Y+PSPGV+YPTL FL+E Sbjct: 52 RAGRMLADGDLKLITLSLLAEAPRHGYDIIKALEERTSGIYSPSPGVVYPTLTFLEEAGY 111 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNF 171 + EG KK ++TE G L +NRE ++ + + ++ R +M +A D F Sbjct: 112 -AVSSSEGNKKVFSITEAGQAHLADNREMIDGVLDHLE--------RFGRKMAKARDWF 161 >UniRef50_C5SJF5 Transcriptional regulator, PadR-like family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SJF5_9CAUL Length = 190 Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 15/142 (10%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 LV+L ++S SHGYELI+AI++ G Y PSPG++YP L +L++ ITI + G+K Sbjct: 52 LVLLSLISEKPSHGYELIRAIDDRFNGQYAPSPGIVYPALSWLEDGGFITITPDTEGRKV 111 Query: 125 IALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ------MKRALDNFKAVLDLR 178 +TE G +L E E+VE R A + P+ + RA+DN KA L R Sbjct: 112 ATITEAGTAFLAERAEEVE--------RLFTEAPQSAPEGPDFAPIFRAMDNLKAALRNR 163 Query: 179 VNQSDISDAQIKKIIAVIDRAA 200 + D ++ I+ ID A Sbjct: 164 AARPLTQD-ELHAIVDGIDDLA 184 >UniRef50_D1NZ20 Transcriptional regulator, PadR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NZ20_9ENTR Length = 214 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/159 (33%), Positives = 91/159 (57%), Gaps = 2/159 (1%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G +R F +LR+ IL +L ++GYELIK I T G Y PSPGVIYPTL L+E Sbjct: 47 GKSVRRMFNPKQLRIYILHLLVDRANYGYELIKKISESTAGLYCPSPGVIYPTLTLLEEL 106 Query: 111 SLITIREEEG-GKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRAL 168 I+I EE G+K +T +G +L E + ++ ++K A+ + A + +++ A+ Sbjct: 107 GFISIGEETAKGRKCYEITPEGRCFLLLKVEILNEVKAKLKYAQELRAGNQFANEIESAV 166 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 D FK++L ++ +S + K++ +I++A I Q++ Sbjct: 167 DKFKSLLRHKIVLQQLSKGEAAKVVEIINQAVNRIEQVN 205 >UniRef50_Q2G591 Transcriptional regulator, PadR family n=2 Tax=Sphingomonadaceae RepID=Q2G591_NOVAD Length = 214 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 67/130 (51%) Query: 77 HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLE 136 HGY+LI+A+ L G Y PSPGV+YPTL L ++ LI +G +K A T+ G L+ Sbjct: 85 HGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGLIAEEAGDGPRKAFAATDAGRTELD 144 Query: 137 ENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVI 196 ++++ I R+KA +P ++RA+ N AVL R I ++ Sbjct: 145 GRSDELDAIVARLKALGDQGERSASPPVRRAMGNLHAVLRNRAMAEGFDTETAHAIADIL 204 Query: 197 DRAAFDITQL 206 D AA I +L Sbjct: 205 DEAARRIERL 214 >UniRef50_C6NX27 Transcriptional regulator, PadR-like family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX27_9GAMM Length = 140 Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 LR V+L L R+ HGYELIK + + G Y+PSPG+IYP L L+E L+ + E G K Sbjct: 2 LRFVVLQELDREPCHGYELIKRLTERSGGIYSPSPGMIYPMLTMLEELGLVLV-TESGNK 60 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKA 151 ++ +LT++G +L+ENR + + ER++A Sbjct: 61 RRYSLTDRGKDFLDENRALTQAVAERLEA 89 >UniRef50_B2PUN1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUN1_PROST Length = 152 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 5/145 (3%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQI 125 ++L ++++ S+GYE+IK I+ + G Y PSPGVIYPTL L+EQ + E +K Sbjct: 1 MVLSLVAKKPSYGYEIIKDIQEASNGLYVPSPGVIYPTLTLLEEQGFLESEVVERNRKSF 60 Query: 126 ALTEQGAQWLEENREQVEMIEERI-KARCV--GAALRQNPQMKRALDNFKAVLDLRVNQS 182 +T +GA L+ N+E +I ++ KAR + G L + +M A+ FKA+L ++ Sbjct: 61 KITAEGAAHLKANQETETIIFRKLAKARDMQHGGNLSEEIEM--AVSRFKALLRHKMVLK 118 Query: 183 DISDAQIKKIIAVIDRAAFDITQLD 207 +S+ Q ++I +I+ A I Q++ Sbjct: 119 QLSEQQTRQIAQIINDAVQQIEQVN 143 >UniRef50_A9GIC6 Transcriptional regulator, PadR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIC6_SORC5 Length = 207 Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 1/146 (0%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G +R ++LD+L+ HGYE+I+AIE + Y PSPGVIYPTL L+E + E E Sbjct: 50 GGVRYLVLDVLAERARHGYEVIQAIEQRSGDTYRPSPGVIYPTLQMLEELGHARVIEAE- 108 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 G+K +T+ G + L+ NRE V+ ER + + + + +L + Sbjct: 109 GRKIYEITDAGREDLKANREYVDEFYERFVETSWERFAEDFGDVMKRIGSLMKMLRHAMR 168 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 + I+ A + + + V+D+AA +I +L Sbjct: 169 RGRITPAVLARTVKVLDKAAAEIEEL 194 >UniRef50_B2TFG8 Transcriptional regulator, PadR-like family n=67 Tax=Proteobacteria RepID=B2TFG8_BURPP Length = 287 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 20/150 (13%) Query: 70 ILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTE 129 ++ SHGYELIKA+E + G Y+PSPG++YP L +L+E +T+ + EG +K+ L+E Sbjct: 123 MIGSQPSHGYELIKALETRSNGFYSPSPGMVYPALTYLEELGYVTV-QLEGNRKRYELSE 181 Query: 130 QGAQWLEENREQVEMIEERIK--ARCVGAALRQN--------------PQMKRALDNFKA 173 G ++L NR++ E++ ++ AR + + R P++ A K Sbjct: 182 TGREYLAANRDRAELMLAKLSHIARKMDSVRRAFAGEEPADISEGGWLPELSEARRALKH 241 Query: 174 VLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 L + + + AQ ++I ++ RAA +I Sbjct: 242 AL---LRRDNAPAAQQRRIAEILLRAAKEI 268 >UniRef50_C5AKR8 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKR8_BURGB Length = 273 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 1/74 (1%) Query: 76 SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWL 135 SHGYELIKA++ +QG Y PSPG++YP L +L+E + +T+ E EG +K+ AL E G L Sbjct: 118 SHGYELIKALDTRSQGFYVPSPGMVYPALTYLEELAYVTV-EAEGNRKRYALAEAGRAHL 176 Query: 136 EENREQVEMIEERI 149 + RE+VE++ ++ Sbjct: 177 DAQRERVELLFAKL 190 >UniRef50_D1YXU7 PadR-like family transcriptional regulator n=2 Tax=Euryarchaeota RepID=D1YXU7_METPS Length = 106 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 GR R G L++++L I+S+ HGY++I AIE +T G++ PSPG IYP LDFL+ + Sbjct: 7 GREMR---KGFLKMIVLKIISKKPIHGYDIIHAIETITHGHWVPSPGSIYPVLDFLEARG 63 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQ 141 +++ EE KK +TE+G + LE E+ Sbjct: 64 YVSM-EEIDRKKVYTITEEGKKALEAIEEK 92 >UniRef50_B2Q1E3 Putative uncharacterized protein n=3 Tax=Providencia RepID=B2Q1E3_PROST Length = 183 Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 2/159 (1%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G R F +LR+ IL +L+ ++GYELIK I T G Y PSPGVIYPTL L+E Sbjct: 14 GKSLSRMFNPKQLRVYILHLLADGSNYGYELIKKIGQETAGFYCPSPGVIYPTLTLLEEL 73 Query: 111 SLITIREEEG-GKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRAL 168 LIT +E+G G+K +LT +G +L + + ++ ++ A+ + A + +++ A+ Sbjct: 74 GLITAYKEQGKGRKCYSLTPEGKCFLLLKADILAEVQLKLSYAQELTAGNQFAKEIELAV 133 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 D FK++L + +++ Q +++ +I+ A I Q++ Sbjct: 134 DRFKSLLRHNIVLQELTKEQSMRVVEIINSAVERIEQVN 172 >UniRef50_A5FQF6 Transcriptional regulator, PadR family n=2 Tax=Dehalococcoides RepID=A5FQF6_DEHSB Length = 182 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Query: 35 HQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYT 94 H E R +R R F G+++ VILD+L +HGYE+ +++E G Y+ Sbjct: 7 HNFERHSHPFDRFSHSFEKRSRMFKRGDMKFVILDLLKDKPAHGYEVTQSLEERFHGLYS 66 Query: 95 PSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 PS G +YP L L + +T E E GKK +T+ G ++L E E I+ER+ Sbjct: 67 PSTGSVYPVLQLLGDMEYVTSSEVE-GKKIYTITDGGKKFLHEQEETTNKIKERL 120 >UniRef50_C2AQN6 Predicted transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AQN6_TSUPA Length = 246 Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G++R+ +L +L + HGY+++ +IE T G + PSPG IYPTL L+++ LI+I E E Sbjct: 87 GDVRIAVLKLLESEPMHGYQIVSSIEERTAGAWKPSPGAIYPTLSQLEDEGLISI-EREN 145 Query: 121 GKKQIALTEQGAQWLEEN 138 G+K LT+ G +++ E+ Sbjct: 146 GRKVATLTDAGREYVTES 163 >UniRef50_D1A5M7 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A5M7_THECD Length = 195 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GG HGR GRR + G +R +L +L+ HGYE+I+ +EN T G + PSPG +Y Sbjct: 36 LWGGPHGRRHGRRMK---RGNVRAALLALLAERPMHGYEMIQELENRTSGAWRPSPGSVY 92 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQG 131 P L L+++ L+T R EEGGK+ +LT+ G Sbjct: 93 PNLQMLEDEGLVTSR-EEGGKRLFSLTDTG 121 >UniRef50_D1VPN8 Transcriptional regulator, PadR-like family n=1 Tax=Frankia sp. EuI1c RepID=D1VPN8_9ACTO Length = 267 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 54/81 (66%), Gaps = 1/81 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ HGY+L++AI T G + PSPG +YPT+ L+++ L+T+ +GG Sbjct: 91 DVRAAVLLLLADGPRHGYQLMQAIAERTGGAWQPSPGAVYPTISQLEDEGLVTV-TADGG 149 Query: 122 KKQIALTEQGAQWLEENREQV 142 ++ + +TE G +L +NR+ + Sbjct: 150 RRLVTITEAGQAYLAKNRDTI 170 >UniRef50_B2IKL6 Transcriptional regulator, PadR-like family n=2 Tax=Alphaproteobacteria RepID=B2IKL6_BEII9 Length = 209 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 15/142 (10%) Query: 76 SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWL 135 +HGYELI+ +E + G Y PSPG++YP L +L+E ++ +EG +K +LTE+G Q L Sbjct: 68 AHGYELIRMLEERSGGFYAPSPGMVYPALTYLEEIGHASV-TQEGNRKLYSLTEEGRQSL 126 Query: 136 EENREQVEMIEE---RIKARCVGAALRQ--------NPQMKRALDNFK-AVLDLRVNQSD 183 + +RE+ + I E RI +R A +R+ +PQ L + A+ + + Sbjct: 127 QAHREEADFILETLARIGSRM--AEVREAFAGVDAADPQAADELHQARHAIKHALMRKRG 184 Query: 184 ISDAQIKKIIAVIDRAAFDITQ 205 S A+ ++I ++ RA +I + Sbjct: 185 CSPAEARRIAGILQRATAEILE 206 >UniRef50_Q4ZPG6 Transcriptional regulator PadR-like n=13 Tax=Pseudomonas RepID=Q4ZPG6_PSEU2 Length = 196 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 6/123 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G+L+L++L +++ +HGY+LI+ IE L +G Y PSPGVIYPTL FL+E ++ + Sbjct: 41 FAPGDLKLLLLALIAEQPAHGYDLIRKIEGLFEGAYCPSPGVIYPTLTFLEESEMVA-GD 99 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR---QNPQMKRALDNFKAV 174 + GKK +T+ G Q LE+ +E + RI +LR + P++ A+ N + Sbjct: 100 AQAGKKLYTVTDAGRQSLEDQAVALEGVRMRID--VSKRSLRGHDRPPEIHEAVHNLRHA 157 Query: 175 LDL 177 L + Sbjct: 158 LQM 160 >UniRef50_A3IWR1 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IWR1_9CHRO Length = 201 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 22/153 (14%) Query: 26 SEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAI 85 SEH+H G G G H R G R G+++ ++L +L+ HGY+LI+ I Sbjct: 33 SEHKHPGKGRPRRRGH-----HLRDGRTR---IPRGDIKYLLLSLLAEKPQHGYQLIREI 84 Query: 86 ENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMI 145 E G Y PSPG +YPTL L+E + +T + E GKK +T+ G + L ++ V M+ Sbjct: 85 ELRWGGFYRPSPGSVYPTLQLLEEGNYLTSEQLE-GKKVYTITDSGKELLAQHEPSVSML 143 Query: 146 EERIKARCVGAALRQNPQ---MKRALDNFKAVL 175 + + + PQ +K L + K V+ Sbjct: 144 D----------VVEEQPQLIELKTTLRDLKEVI 166 >UniRef50_C6WET7 Transcriptional regulator, PadR-like family n=11 Tax=Actinomycetales RepID=C6WET7_ACTMD Length = 316 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 13/110 (11%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 +R ++ +L+ HGYE+I+ I T G + PSPG +YPTL L ++ L+ EE+GGK Sbjct: 173 VRAAVIALLAERPMHGYEMIQEIGQRTDGLWKPSPGSVYPTLQLLADEGLVVAAEEQGGK 232 Query: 123 KQIALTEQG----------AQWLEENREQVEMIEERIK--ARCVGAALRQ 160 K LTE G W E+ + V+ E R++ A+ +GAA+ Q Sbjct: 233 KLFQLTESGRTEAESAEGVPPW-EQVTDGVDQGEARLREAAKQIGAAMMQ 281 >UniRef50_B2UHK8 Transcriptional regulator, PadR-like family n=5 Tax=Ralstonia RepID=B2UHK8_RALPJ Length = 219 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query: 77 HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLE 136 HGYELIKA+E + G YTPSPG++YP L +L++ ++ EG KK+ +T +G WL Sbjct: 74 HGYELIKAVEEHSLGFYTPSPGMVYPALSYLEDHGFASV-TVEGNKKRYGITPEGETWLA 132 Query: 137 ENREQVEMIEERIKA 151 E + + I +++A Sbjct: 133 ERQHSADAILAQLRA 147 >UniRef50_Q137X5 Transcriptional regulator, PadR family n=2 Tax=Rhodopseudomonas palustris RepID=Q137X5_RHOPS Length = 211 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 17/164 (10%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 R G R R G G+L+L+ L +++ HGY++IK +E T GNY PS ++YPTL L+ Sbjct: 42 RRGMRAGRMLGQGDLKLLALALIAELPRHGYDIIKVVEEATGGNYAPSSSLVYPTLTLLE 101 Query: 109 EQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR------QNP 162 E + + EG KK +T++G L NR ++ +R+ A +L P Sbjct: 102 ELGHLR-SQSEGSKKLYVITDEGQAHLAANRTVADVAFKRLAAYRKRGSLPCRHHRDAEP 160 Query: 163 Q----------MKRALDNFKAVLDLRVNQSDISDAQIKKIIAVI 196 M+ ALDN V R+ Q ++A++ I+A + Sbjct: 161 NEVEHAGLPALMRAALDNLSDVAGKRILQDPATEAELVAIVARV 204 >UniRef50_D2B5F1 Transcriptional regulator protein-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5F1_STRRD Length = 250 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G++R IL +L+ + +GY++I+ IE ++G + PSPG +YP L L ++ L+ + EE Sbjct: 103 GDVRAAILALLTEEPHNGYQIIQEIERRSEGGWKPSPGAVYPALQQLTDEGLV-LSEEND 161 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 G+K LTE G ++ E+ ++V E + + M A + A+L + Sbjct: 162 GRKSFRLTEAGRAYVTEHADEVRAPWEEMTPDVDDSTWE---MMNLARQSGFAMLQILQT 218 Query: 181 QSDISDAQIKKIIAVIDRAAFDI 203 SD Q K+I+ R + I Sbjct: 219 GSDAQIRQAKQILTETRRKLYQI 241 >UniRef50_UPI000050FEE8 transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEE8 Length = 185 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 13/125 (10%) Query: 54 RQRF-FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 +Q F G++R IL +L+ HGY++I+ IE + G++ PSPG +YPTL L ++ L Sbjct: 36 KQPFRMNRGDVRAGILTLLAEAPMHGYQIIQEIEERSGGSWKPSPGSVYPTLQLLTDEGL 95 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 I+ E G+K +LTE G REQVE E + P RA + K Sbjct: 96 ISA-ESSSGRKTYSLTEAG-------REQVESEPE----SSAPWETTKKPDAPRAANLAK 143 Query: 173 AVLDL 177 A ++L Sbjct: 144 AGVEL 148 >UniRef50_A1R8I7 Putative transcriptional regulator, PadR family domain protein n=2 Tax=Actinobacteria (class) RepID=A1R8I7_ARTAT Length = 178 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G GELR IL +L+ HGY++I+ IE + G++ PS G +YPTL L ++ ++ EE Sbjct: 38 GRGELRTAILALLAERPMHGYQIIREIEERSGGSWKPSAGSVYPTLQLLADEGFVST-EE 96 Query: 119 EGGKKQIALTEQG 131 G+K +LTE G Sbjct: 97 SNGRKIYSLTEAG 109 >UniRef50_A8M728 Transcriptional regulator, PadR-like family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M728_SALAI Length = 189 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 45/69 (65%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 +R +L +L+ HGYE+I+ I++ T G + PSPG +YPTL L+++ +I E GG+ Sbjct: 49 VRNAVLALLTERPMHGYEMIQEIDSRTGGAWRPSPGSVYPTLQLLEDEGVIVSTAEGGGR 108 Query: 123 KQIALTEQG 131 K+ LT QG Sbjct: 109 KRFTLTPQG 117 >UniRef50_Q4J6E8 Transcriptional regulator PadR-like family n=2 Tax=Sulfolobus RepID=Q4J6E8_SULAC Length = 159 Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 14/136 (10%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G LRL++L L+ + YE+IK+IE +G Y PS G IYP L L I I+E + Sbjct: 13 RGTLRLLVLSSLAEKPMYLYEIIKSIETKAEGFYRPSTGSIYPVLRSLARDGYIIIQERD 72 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALD-NFKAVLDLR 178 GKK +LT++G + +EE + ++E + ++P +R +D F L + Sbjct: 73 -GKKIYSLTDKGVKKVEEIKIEIE------------SLFTRDPLKRRVIDLLFNIGLTVH 119 Query: 179 VNQSDISDAQIKKIIA 194 +N+ I D + ++I Sbjct: 120 INRKKIDDKVLNQLIT 135 >UniRef50_D1BI54 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BI54_SANKS Length = 271 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 1/96 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +LS HGY+LI+ I + G ++PSPG IYP L+ L+++ LI I + G Sbjct: 109 DIRGAVLLLLSEQPMHGYQLIQEITERSGGRWSPSPGAIYPALNLLEDEGLIVI-TADSG 167 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 +K +LT +G +E++RE + +R + A Sbjct: 168 RKLASLTPEGVSHVEQHREDLVAPWDRATGQAAHPA 203 >UniRef50_C1YU51 Predicted transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YU51_NOCDA Length = 395 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 3/107 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LRL +L +L + HGYE+I + + G Y+PSPG IYP L L+E+ L+T Sbjct: 4 IFGHGRLRLYLLKLLDENPRHGYEIISLLRDRFLGVYSPSPGTIYPRLARLEEEGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERI--KARCVGAALRQN 161 EEGG+K +LT++G + L E + +E I R + A++Q+ Sbjct: 63 TEEGGRKVYSLTDKGREELRERENDLNDLEREITDSVRDIARAVKQD 109 >UniRef50_A4WHQ6 Transcriptional regulator, PadR family n=5 Tax=Thermoproteaceae RepID=A4WHQ6_PYRAR Length = 159 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 3/84 (3%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---K 122 ++L L GYEL+K + L+ G YTPSPG +YP L +L+ + LI RE G K Sbjct: 12 IVLYFLKSRPLSGYELLKELNRLSSGRYTPSPGTLYPLLSYLEAEGLIESREAYVGRRRK 71 Query: 123 KQIALTEQGAQWLEENREQVEMIE 146 K ALT QG ++L E E +E Sbjct: 72 KIYALTPQGEEYLARLMEDEEFLE 95 >UniRef50_A0Q9V4 Transcriptional regulator, PadR family protein n=21 Tax=Actinomycetales RepID=A0Q9V4_MYCA1 Length = 256 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 43/70 (61%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ HGYE+I+ I + G + PSPG +YPTL L ++ LIT E +G Sbjct: 117 DVRAAVLALLAERPMHGYEMIQLIAERSNGLWKPSPGSVYPTLQLLADEGLITATETDGS 176 Query: 122 KKQIALTEQG 131 KK LT+ G Sbjct: 177 KKLFELTDDG 186 >UniRef50_Q3SN82 Transcriptional regulator, PadR family n=3 Tax=Nitrobacter RepID=Q3SN82_NITWN Length = 141 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 2/94 (2%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G+LRLV L ++S HGY++I+ +E +T + PSP V++P L L E+ +T Sbjct: 9 VAEGDLRLVALSLISEAPRHGYDIIQTVEKMTADWFLPSPNVVHPMLAKLVEERCLTASA 68 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKA 151 + + ++T++G +LE++R++ + + R+KA Sbjct: 69 DP--PRLFSITDEGRAYLEQHRDRADAVLNRLKA 100 >UniRef50_B5GFD7 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=B5GFD7_9ACTO Length = 244 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L HGYE+I+ I + G + PSPG +YPTL L+++ LI R E G Sbjct: 70 DVRASILALLKDRPMHGYEMIQEIAERSGGAWKPSPGSVYPTLQLLEDEGLILSRSES-G 128 Query: 122 KKQIALTEQG 131 KK ALTE+G Sbjct: 129 KKLFALTEEG 138 >UniRef50_Q8NLG3 Predicted transcriptional regulators n=4 Tax=Corynebacterium RepID=Q8NLG3_CORGL Length = 192 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 26/202 (12%) Query: 7 GCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLV 66 G + G+P G + H H GR G R +LR V Sbjct: 15 GSGEFRGRP-------GRRHAQRHAEGHGHGHHHGRRPGRGRGGRAGRG------DLRNV 61 Query: 67 ILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIA 126 IL +L + HGY++I I T+GN+TPSPG IYPTL L+++ LI+I E G+K Sbjct: 62 ILVLLEAESMHGYQIITTISEQTEGNWTPSPGTIYPTLSMLEDEGLISI-SHEMGRKMAR 120 Query: 127 LTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMK--RALDNFKAVLDLRVNQSDI 184 LTE+GAQ + +N++ I E + NP+ + R + +R Sbjct: 121 LTEEGAQEVAKNKDAWGSILEAYR----------NPESREVRVFNIRSEFHKVREAAKAA 170 Query: 185 SDAQIKKIIAVIDRAAFDITQL 206 D + ++II ++ RAA DI +L Sbjct: 171 PDDKAEQIIEILRRAADDIKRL 192 >UniRef50_B9KC28 Transcriptional regulator, PadR family n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC28_THENN Length = 153 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 18/150 (12%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L+ ++L ++S++ SHGY ++K I + G PSPG +YP L L++Q I EEG Sbjct: 9 GHLKFLVLHVISQEPSHGYHIMKKISQIM-GAEPPSPGALYPVLSSLRKQRYIETH-EEG 66 Query: 121 GKKQIALTEQGAQWLEEN----REQVEMIEE-RIKARCVGAALRQNPQMKRALDN-FKAV 174 KK L+E+G ++L+E+ +E +E E R+ + G+++R +D FK V Sbjct: 67 KKKIYRLSEKGRKFLKEHEKEIKEALEFAERFRMFSEICGSSIRN------VMDVIFKNV 120 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 +L +Q +++K+I ++ + I Sbjct: 121 KNLSSDQ----KSKLKQITEEFEKKVYSIV 146 >UniRef50_B5IFX4 Transcriptional regulator, PadR family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFX4_9EURY Length = 151 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 13/147 (8%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-REEEGG 121 L+LVILDIL + HGY + + I+ + + PS G+IYPTL L++ LI I E E Sbjct: 9 LKLVILDILRMSELHGYGISEKIDEIYRVG-KPSSGIIYPTLSSLKKSGLIRICAEGERD 67 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQM--KRALDNFKAVLDLRV 179 KK ++T +G ++LEEN+E +E KA+ + L + M K+ + + + ++ Sbjct: 68 KKIYSITPKGIEYLEENKENLE------KAKTMLKNLGEFYSMGGKKLVKDIEKLIK--- 118 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 N I + + K+I +I+R +I ++ Sbjct: 119 NMHKIGEDEKKRIAKIINRMHDEIEEI 145 >UniRef50_C3JSU7 Transcriptional regulator, PadR family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JSU7_RHOER Length = 267 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +++ + HGYELI+ I + G + PSPG IYP L L+++ L+ I E+ G Sbjct: 119 DVRAAILLLIAEEPMHGYELIQQIVERSGGVWKPSPGSIYPALSQLEDEGLVII-EKVAG 177 Query: 122 KKQIALTEQGAQWLEENR 139 +K LTE+G ++EE+R Sbjct: 178 RKTAKLTEEGVAYVEEHR 195 >UniRef50_B8H9F8 Transcriptional regulator, PadR-like family n=3 Tax=Micrococcineae RepID=B8H9F8_ARTCA Length = 180 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G GE+R +L +L+ HGY++I+ IE + G++ PS G +YPTL L ++ +I EE Sbjct: 38 GKGEVRAAVLALLAERPMHGYQIIREIEERSGGSWKPSAGSVYPTLQLLADEGVIRA-EE 96 Query: 119 EGGKKQIALTEQG 131 G+K +LTE G Sbjct: 97 SNGRKIYSLTEAG 109 >UniRef50_Q4C4V0 Transcriptional regulator PadR-like n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C4V0_CROWT Length = 152 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 11/103 (10%) Query: 68 LDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIAL 127 L +L+ HGY+LIK IEN G Y PSPG +YPTL L+E++ +T +E E GKK ++ Sbjct: 18 LSLLAEKPQHGYQLIKEIENRWGGFYRPSPGSVYPTLQQLEERNYLTSQEVE-GKKVYSI 76 Query: 128 TEQG----------AQWLEENREQVEMIEERIKARCVGAALRQ 160 T+ G A+ L ++ EQ ++IE ++ R + + Q Sbjct: 77 TDSGEQLLAQQPSSAETLNKSEEQPKLIELKMTLRDLQEVIMQ 119 >UniRef50_Q0S0L1 Possible transcriptional regulator n=3 Tax=Nocardiaceae RepID=Q0S0L1_RHOSR Length = 218 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ + HGYELI+ I + G + PSPG IYP L L+++ L+ I E+ G Sbjct: 65 DVRSAILLLLTEEPMHGYELIQQIVERSDGVWKPSPGSIYPALSQLEDEGLVLI-EKVAG 123 Query: 122 KKQIALTEQGAQWLEENREQV 142 +K LT++G ++E N+ ++ Sbjct: 124 RKTARLTDEGEAFVEANKTEL 144 >UniRef50_UPI0001C3245B transcriptional regulator, PadR-like family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3245B Length = 255 Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 4/144 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G++R L +L+ +GY++++A+E + G + PSPG +YP L L+++ L+ E++ Sbjct: 94 RGDVRTAALLLLAEQPRNGYQIMQALEERSNGAWRPSPGSVYPALQQLEDEGLVRSTEQD 153 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G+K LT++G Q++EE E V +++ A M+ A + A+ + Sbjct: 154 -GRKLFELTDEGRQYVEERGEDVPAPWDQMAGDISADAW---ALMQTAREVGMAMFQVMQ 209 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 + SD + ++I+A R + + Sbjct: 210 SGSDAQRREAQRILAATRRDLYRV 233 >UniRef50_A5IKC3 Transcriptional regulator, PadR family n=5 Tax=Thermotogaceae RepID=A5IKC3_THEP1 Length = 150 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L+ ++L I+S+ SHGY ++K I + G PSPG +YP L L++Q I EG Sbjct: 6 GHLKFLVLHIISQQPSHGYYIMKKISQII-GAEPPSPGALYPILSSLRKQKYIETY-NEG 63 Query: 121 GKKQIALTEQGAQWLEENREQVE 143 +K LT++G ++LEE++E+++ Sbjct: 64 KRKVYRLTDKGRKYLEEHKEEIK 86 >UniRef50_Q7NV79 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NV79_CHRVO Length = 207 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 1/91 (1%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 R R FG +L+L++L ++S HGYELIK + + + G Y+PSPGVIYP L L+E + Sbjct: 32 RGRKFGADDLQLLLLALISEKSCHGYELIKELASRSNGYYSPSPGVIYPALVHLEEAGQV 91 Query: 114 TIREEEGGKKQIALTEQGAQWLEENREQVEM 144 T+ G +K +L + G + L +RE VE+ Sbjct: 92 TV-ASHGKRKCYSLADAGRERLAIHREHVEL 121 >UniRef50_B4SHM6 Transcriptional regulator, PadR-like family n=3 Tax=Stenotrophomonas RepID=B4SHM6_STRM5 Length = 186 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 4/122 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R G+LRL++L ++ HGYEL++ I N YTPS G +YP L ++ I Sbjct: 24 RVLSRGDLRLLVLALIGEQPRHGYELMQLISNQFMQAYTPSAGTMYPLLASFEQAGWIEA 83 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERI--KARCVGAALRQNPQMKRALDNFKA 173 EE GK+ +T G L+ R QV + + R +AR + A P + AL FK Sbjct: 84 -EEVDGKRIFRITAAGEFELKVQRTQVRLAQRRAFDRAREITKA-SLPPPLAGALREFKR 141 Query: 174 VL 175 L Sbjct: 142 AL 143 >UniRef50_B8HG13 Transcriptional regulator, PadR-like family n=4 Tax=Micrococcineae RepID=B8HG13_ARTCA Length = 206 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G++R IL +L+ S+GY LIK I T+G + PSPG IYPTL L ++ LI EG Sbjct: 68 GDVRAAILSLLAESPSNGYGLIKTIAEKTEGAWRPSPGSIYPTLQQLVDEGLIEAM-SEG 126 Query: 121 GKKQIALTEQGAQWLEENREQVE 143 + +LTE G +++ + E+++ Sbjct: 127 RGTEFSLTETGREYVAGHTEEMD 149 >UniRef50_C1RLJ9 Transcriptional regulator, PadR family n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RLJ9_9CELL Length = 230 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 50/81 (61%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ S+GY LIKAI T G + PSPG +YPTL L ++ L+T + Sbjct: 90 DVRAAILQLLAEFPSNGYGLIKAIGERTGGLWRPSPGSVYPTLQQLTDEGLVTPTDAGSA 149 Query: 122 KKQIALTEQGAQWLEENREQV 142 + + LTE+G ++E + +++ Sbjct: 150 RTEYTLTEEGRAYVEAHPDEL 170 >UniRef50_B2IYD3 Transcriptional regulator, PadR-like family n=4 Tax=Cyanobacteria RepID=B2IYD3_NOSP7 Length = 208 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 2/94 (2%) Query: 48 GRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFL 107 GRG G R G+++ ++L++LS SHGY+LIK +E G SPG +YPTL L Sbjct: 49 GRGWGDEHRT-RRGDIKFILLELLSEHPSHGYDLIKEMETRYGGFRRLSPGSVYPTLQLL 107 Query: 108 QEQSLITIREEEGGKKQIALTEQGAQWLEENREQ 141 +E + +EGGK+ +T++G + L E +Q Sbjct: 108 EEGGYLK-SAQEGGKRIYTITDEGRKLLAERAQQ 140 >UniRef50_A4YF39 Transcriptional regulator, PadR family n=2 Tax=Sulfolobaceae RepID=A4YF39_METS5 Length = 131 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 2/84 (2%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 G+ QR G L L +LD S+ + G ++++ IE +TQG + PSPG +YP LD ++ + Sbjct: 3 GQWQRKRGLANLILTLLD--SKGEMTGAQIMREIEKVTQGIWRPSPGAVYPALDKMESEG 60 Query: 112 LITIREEEGGKKQIALTEQGAQWL 135 LIT+ + E ++ A+TE+G + L Sbjct: 61 LITVSKVERSQRYYAITEKGKRLL 84 >UniRef50_A4YE88 Transcriptional regulator, PadR family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YE88_METS5 Length = 154 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 2/77 (2%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L+ +I+D L H YE++K IE G Y PSPG +YP L L + L+ + EE Sbjct: 11 GALKFLIMDALHHKPMHAYEIMKTIEGKFNGVYKPSPGSLYPVLKNLIREGLVKV-EERD 69 Query: 121 GKKQIALTEQGA-QWLE 136 GKK +LT++G +W E Sbjct: 70 GKKVYSLTDEGLKKWTE 86 >UniRef50_B0RN88 Transcriptional regulator, PadR-like family n=5 Tax=Xanthomonas RepID=B0RN88_XANCB Length = 177 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 6/160 (3%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GR RGG R GHG+LRL++L ++ + HGYEL++ I L +G YTPS G IY Sbjct: 15 TPAGRARRGGTARP--LGHGDLRLLLLALIEQQPRHGYELMRQIAQLFKGLYTPSAGTIY 72 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 P L L+ + + +++ G+K+ +TE G +R+ ++ R R Q Sbjct: 73 PALAQLEADGWV-LTDQDHGRKRYQITEAGRGHASAHRDALDAALARTHRRARDLIKAQT 131 Query: 162 -PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAA 200 P ++ A+ K L R Q ++A+ +I A+++ AA Sbjct: 132 PPPIRDAIHRIKHGLFARHGQ--WTEAETARIAALLNAAA 169 >UniRef50_D2PQ95 Transcriptional regulator, PadR-like family n=2 Tax=Actinomycetales RepID=D2PQ95_9ACTO Length = 230 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 5/110 (4%) Query: 44 GGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPT 103 GG G G + +R G++R IL +L+ +GY++I+ + + G + PSPG IYPT Sbjct: 69 GGPRGWKGPKARR----GDVRAAILAVLAEQPMNGYQIIQVVAERSGGAWKPSPGSIYPT 124 Query: 104 LDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 L L+++ L+ + G++ LT++G ++ E+ ++V E + A Sbjct: 125 LQQLEDEGLVRA-DAAVGRRTFTLTDEGRTYVAEHADEVSAPWEAMSANA 173 >UniRef50_Q47SG6 Transcriptional regulator, PadR family n=1 Tax=Thermobifida fusca YX RepID=Q47SG6_THEFY Length = 268 Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LRL +L +L HGYE+I + + G Y+PSPG IYP L L+E+ L+T Sbjct: 4 IFGHGRLRLYLLKLLDESPRHGYEIISLLRDRFLGIYSPSPGTIYPRLARLEEEGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 EE G+K LT++G L E +E +E +I Sbjct: 63 EEVNGRKVYRLTDKGRAELRERERDLEDLERQI 95 >UniRef50_A9WKS9 Transcriptional regulator PadR-like family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WKS9_RENSM Length = 217 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 8/146 (5%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G++R IL LS + +GY L+KAI + G + PSPG +YP L LQ + LI + EG Sbjct: 77 GDVRNAILSRLSDSNYNGYGLMKAIALHSDGAWRPSPGSVYPALSGLQAEGLI-VSIGEG 135 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 + + L+E+G ++ E+++++ + ++ GAA + + + + + Sbjct: 136 RRTEFELSEEGRSYVAEHKDELAAVWAEVREET-GAAHDLRLSIGKLMGAVQQI------ 188 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 D ++ Q++ + A +D A I +L Sbjct: 189 TMDGTEEQLRTVTASLDEARRTIYKL 214 >UniRef50_D1AC56 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AC56_THECD Length = 217 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 45 GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTL 104 G G G R R G +R IL +L+ + ++GY+LI+ I + G + PSPG +YP L Sbjct: 58 GGWAPGQGTRAR---KGNIRAAILTLLAEEPANGYQLIQRIGERSGGAWRPSPGAVYPAL 114 Query: 105 DFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQV 142 L ++ LI E E G+K +LT+ G ++ + E++ Sbjct: 115 QQLADEGLIRAAENE-GRKTYSLTDAGRAYVAAHAEEL 151 >UniRef50_C7P8R4 Transcriptional regulator, PadR-like family n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P8R4_METFA Length = 149 Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 2/91 (2%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L+ +IL +L +++ HGY +++ + + Y PS GVIYPTL L+ I ++E Sbjct: 8 GSLKYLILYLLEKEELHGYAIMQKLNEMFV-YYKPSSGVIYPTLQSLRRSGYIEAVKKE- 65 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKA 151 KK +TE+G ++L+EN E++E I I+A Sbjct: 66 DKKLYKITEKGKKYLKENEEKLENIFSHIEA 96 >UniRef50_D2PES9 Transcriptional regulator PadR family protein n=9 Tax=Sulfolobus RepID=D2PES9_SULIS Length = 131 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 43/69 (62%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 L+ +IL +LS+ G +++ IE + G + PSPG +YP LD L+ + LI I + +G K Sbjct: 9 LKWLILYVLSKGTMTGAQIMDEIEKTSYGMWRPSPGSVYPALDALESEGLIRISKVDGWK 68 Query: 123 KQIALTEQG 131 K LTE+G Sbjct: 69 KYYELTEEG 77 >UniRef50_C3MJS4 Transcriptional regulator PadR family protein n=9 Tax=Sulfolobus RepID=C3MJS4_SULIL Length = 148 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 11/133 (8%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L+ ++L+ L+ YE+IK+IE +G+Y PS G IYP L L E+ L+ ++ E Sbjct: 13 GALKYLVLECLNEKPMRTYEIIKSIEKKFEGSYRPSTGSIYPVLKGLVEKDLVEVK-VEN 71 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 GKK +T++G + LEE + + + +G + + Q+ + L + L N Sbjct: 72 GKKIYIITDKGKKELEEIKNK--------SLKLLGDNAKFSRQILQEL--LQIAFYLYNN 121 Query: 181 QSDISDAQIKKII 193 +S I + I+KII Sbjct: 122 RSKIDENNIQKII 134 >UniRef50_B1L3Y8 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Y8_KORCO Length = 149 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 55/88 (62%), Gaps = 3/88 (3%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G RL++LD + + HGYE+++ I + T G + PSPGV+YPTL L+ + L+ EG Sbjct: 9 GLFRLLVLDAIREEPLHGYEIMRRIGD-TLG-HPPSPGVVYPTLRSLESEGLVR-SGREG 65 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEER 148 + ++TE G ++L+EN +++ ER Sbjct: 66 RRTVYSITEDGVKYLKENEDRIRCFMER 93 >UniRef50_C7QEY5 Transcriptional regulator, PadR-like family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QEY5_CATAD Length = 334 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R+ IL +L ++GY+L++ IE T G + PS G IYP L L+++ ++ E E G Sbjct: 187 DVRITILILLDEGPANGYQLMQEIEQRTNGAWKPSSGSIYPALQQLEDEGIVQTTEGE-G 245 Query: 122 KKQIALTEQGAQWLEENR 139 +K AL+++G ++ +NR Sbjct: 246 RKMFALSDEGKTYVRDNR 263 >UniRef50_C5A2S9 Transcription regulator, PadR-like family n=4 Tax=Thermococcus RepID=C5A2S9_THEGJ Length = 160 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 3/79 (3%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 L++L I + ++HGYE++K IE +T GN+ PS G +Y L+ L ++ L+ REE GK++ Sbjct: 18 LILLIIGLKGETHGYEILKEIERITFGNWKPSHGNLYTMLNKLADEGLVESREEYRGKRR 77 Query: 125 IA---LTEQGAQWLEENRE 140 + LTE+G +L E E Sbjct: 78 VIRYRLTEKGWLYLREANE 96 >UniRef50_A1S018 Transcriptional regulator, PadR family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1S018_THEPD Length = 141 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F LR+++L +L + G E+I+ IE +T G + PSPG +YPTL L+E+ L+ RE Sbjct: 4 FARNPLRIMVLSLLRKRPMSGVEIIEEIEEITLGFWRPSPGAVYPTLRALEEEGLVR-RE 62 Query: 118 EEGGKKQIALTEQGAQWLEE 137 EEG +K LTE+G LE+ Sbjct: 63 EEGWRKVYYLTEKGRMELEK 82 >UniRef50_C5C5Y5 Transcriptional regulator, PadR-like family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C5Y5_BEUC1 Length = 277 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L + HGY+L++ I + G++ PSPG IYP L+ L ++ L+ + EGG Sbjct: 113 DVRAAVLLLLHEEPMHGYQLMQEIAERSGGSWRPSPGAIYPALNLLADEGLVEL-SAEGG 171 Query: 122 KKQIALTEQG 131 ++ +LT+ G Sbjct: 172 RRLASLTDAG 181 >UniRef50_UPI000038E215 transcriptional regulator n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E215 Length = 196 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%) Query: 24 EKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQR-FFGHGELRLVILDILSRDDSHGYELI 82 EK E + G + H G H G G +R G G L+ +IL++ S ++ G ++I Sbjct: 29 EKDEKDCNGMNGEMGHRMGNMGHHRMGSGENRRGMHGFG-LKYLILNMASSEEITGVDVI 87 Query: 83 KAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQ 133 ++ T+G + PSPGVIYP L L E+ + +R E+ KK TE+G + Sbjct: 88 DRVDRRTEGRWVPSPGVIYPALRKLYEEGYLEMR-EDNNKKYYKATEKGKE 137 >UniRef50_Q9YC94 Putative transcriptional regulator, PadR family n=1 Tax=Aeropyrum pernix RepID=Q9YC94_AERPE Length = 173 Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 6/79 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE--- 119 LR ++L +L+ HGYE++ IE +T G + P+PG +YP LD L+ + LI + + Sbjct: 20 LRQLVLRVLAERPYHGYEIMNRIEEITNGVWRPAPGTLYPLLDQLKREGLIRVERMDRKG 79 Query: 120 --GGKKQI-ALTEQGAQWL 135 GG++ + ALTE G + L Sbjct: 80 VKGGRRIVYALTEDGWRRL 98 >UniRef50_D1ACF2 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACF2_THECD Length = 238 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 1/95 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LRL +L +L HGYE+I+ +++ G Y+PSPG IYP L L+ L+T Sbjct: 4 VFGHGRLRLYLLKLLEESPRHGYEVIRLLQDRFLGVYSPSPGTIYPRLARLEADGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA 151 E GKK +LT+ G LE +++ +EE I A Sbjct: 63 EVIKGKKVYSLTDAGRAELERRMDELADLEEEIAA 97 >UniRef50_A8MBR3 Transcriptional regulator, PadR-like family n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBR3_CALMQ Length = 144 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 60 HGELRLVILDILS-RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G LR ++L IL+ + + G ++I IE + G + PSPG IYP LD L+E+ LI I Sbjct: 13 RGALRDIVLYILAFKGELTGAQIIDEIERWSFGFWRPSPGSIYPLLDDLEEEGLIKISRI 72 Query: 119 EGGKKQIALTEQGAQ 133 +G KK +LTE+G + Sbjct: 73 DGVKKYYSLTEEGKR 87 >UniRef50_A4G020 Transcriptional regulator, PadR family n=4 Tax=Methanococcus maripaludis RepID=A4G020_METM5 Length = 152 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 20/149 (13%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-REEEGGK 122 +++IL L + HGY LI I +T + SP ++YP L L+ LI + + E+ GK Sbjct: 12 KILILKFLEEEPLHGYLLISKIGEIT--GISVSPSMVYPILSNLKTNGLIEVEKTEDRGK 69 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCV-----GAALRQNPQMKRALDNFKAVLDL 177 K LTE G +L+ENRE+V+ ++ +A G+ L++ + A + F Sbjct: 70 KIYKLTETGHSFLDENREKVDYCMKKSEALYYFHNGGGSELKKAVHL--AFEEF------ 121 Query: 178 RVNQSDISDAQIKKIIAVIDRAAFDITQL 206 +I D + KKI ++ + A DI L Sbjct: 122 ----MNIDDEKRKKIGEIMQKCAKDIRYL 146 >UniRef50_D1SPJ9 Transcriptional regulator, PadR-like family n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SPJ9_9EURY Length = 151 Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 16/132 (12%) Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI-TIREEEGGKKQIALTEQG 131 +++ HGY L++ ++ + Y PS GVIYPTL L+ I ++ E+G KK +T++G Sbjct: 20 KEELHGYALMQKLKGIFV-YYKPSSGVIYPTLQSLRRSGYIEVVKAEDGDKKLYRITDKG 78 Query: 132 AQWLEENREQVEMIEERIKA-----RCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISD 186 ++L+EN E+++ I I+A G L+++ +K + NF+ N +D Sbjct: 79 REYLKENEEKLKKIFSHIEAVRGFHELGGKELKES--IKLVIKNFQ-------NLNDKQK 129 Query: 187 AQIKKIIAVIDR 198 ++KKI+ R Sbjct: 130 EELKKILKETSR 141 >UniRef50_Q6KZ78 Transcriptional regulator n=1 Tax=Picrophilus torridus RepID=Q6KZ78_PICTO Length = 144 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 4/93 (4%) Query: 45 GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTL 104 RH R R FG L+ IL I S + G ++ I T G++ PSPG+IYPTL Sbjct: 6 ARHYFHNAMRMRGFG---LKYAILSIASDKEVTGADIANIIGERTNGHWVPSPGIIYPTL 62 Query: 105 DFLQEQSLITIREEEGGKKQIALTEQGAQWLEE 137 L E + +REE GKK +E+G + E Sbjct: 63 KTLYEDGYLNMREEN-GKKYYRTSEKGRSLINE 94 >UniRef50_A6W6T2 Transcriptional regulator, PadR-like family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W6T2_KINRD Length = 219 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ S+GY +I + + G + PSPG +YPTL LQ++ L+T + Sbjct: 69 DVRAAVLVLLAEGPSNGYRIIGEVTRRSDGEWKPSPGSVYPTLQQLQDEGLVTA--DPAD 126 Query: 122 KKQIALTEQG 131 KQ LTE+G Sbjct: 127 PKQFTLTEEG 136 >UniRef50_C7LZY3 Transcriptional regulator, PadR-like family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZY3_ACIFD Length = 183 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 8/112 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 +R IL +L HGYEL+ I + G + PSPG IYPTL L++Q L+ +G + Sbjct: 51 IRAEILRLLLDGPKHGYELMNLIAEQSGGAWQPSPGSIYPTLQLLEDQGLVA-SASDGDR 109 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + LT+ G RE+ E ++ A R P++ + + + + Sbjct: 110 RVYQLTDAG-------REEAERLQHEPGPHAGPAGARLGPEIAQVMGALRTI 154 >UniRef50_D2AYZ8 Transcriptional regulator protein-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYZ8_STRRD Length = 243 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 1/74 (1%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 FGHG LRL +L +L HGYE+I+ +++ G Y+PSPG IYP L L+E+ L+T E Sbjct: 5 FGHGRLRLYLLKLLEESPRHGYEVIRLLQDRFLGVYSPSPGTIYPRLARLEEEGLVT-HE 63 Query: 118 EEGGKKQIALTEQG 131 GKK +T++G Sbjct: 64 VLDGKKVFTITDRG 77 >UniRef50_Q977Z7 Putative uncharacterized protein TVG1573729 n=2 Tax=Thermoplasma RepID=Q977Z7_THEVO Length = 155 Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GG G G R G +R IL IL+ + G +++ IENLT G + PSPG +Y Sbjct: 1 MFGGMRGPCGHHVDRSRGFVGIRYWILRILADGEKTGADIMTTIENLTMGRWRPSPGAVY 60 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLE 136 P L L+E+ I E + KK +L E+G + ++ Sbjct: 61 PILRALEEEGYIKGTERD-NKKYYSLLEKGKEMID 94 >UniRef50_A4WJU8 Transcriptional regulator, PadR family n=4 Tax=Thermoproteaceae RepID=A4WJU8_PYRAR Length = 144 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 10/100 (10%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G LR V+L +LS +G E+I+A+E T G + PSPG +YP L L+ + L+ R Sbjct: 8 FLGRRGLREVVLWLLSDKPMNGAEIIRAVEEFTWGFWRPSPGSVYPLLRQLEAEGLVRRR 67 Query: 117 EE------EGGK---KQIALTEQGAQWLEENREQVEMIEE 147 ++ E G+ +QI +G +W ++ +++EE Sbjct: 68 QDGRYELTEAGRNAARQIPWI-RGPKWWGWSKSVGDLVEE 106 >UniRef50_C8XGD0 Transcriptional regulator, PadR-like family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGD0_NAKMY Length = 263 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L HGY++I+ IE + G + PSPG +YPTL L+++ L+ EE G Sbjct: 95 DVRSAVLALLVDQPMHGYQIIQEIERRSHGAWKPSPGSVYPTLQQLEDEGLVRA-EELDG 153 Query: 122 KKQIALTEQG 131 ++ LTE G Sbjct: 154 RRVYRLTEDG 163 >UniRef50_A1SQM2 Transcriptional regulator, PadR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SQM2_NOCSJ Length = 234 Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 8/110 (7%) Query: 43 CGGRHGRGGGRRQRF--FGHGELRLVILDIL-----SRDDSHGYELIKAIENLTQGNYTP 95 G G G RQR G++R ILD++ + + +GY++I+ I + G + P Sbjct: 51 VAGLFGLAQGDRQRGPRVRRGDVRTAILDVVRTAQWNGEPVNGYQVIQQIAERSNGAWRP 110 Query: 96 SPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMI 145 SPG +YPT+ L+++ L+ E+ GG++ + LT +G ++ ++ +++ + Sbjct: 111 SPGSVYPTIQQLEDEGLLAT-EDTGGRRSLRLTAEGEAYVADHADELSSV 159 >UniRef50_D1X4A7 Transcriptional regulator, PadR-like family n=8 Tax=Streptomyces RepID=D1X4A7_9ACTO Length = 349 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 12/121 (9%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F HG LRL +L +L HGYE+I+ +E QG Y PS G +YP L L+ + L+T Sbjct: 5 FAHGRLRLYLLKLLDEAPRHGYEVIRLLEERFQGLYAPSAGTVYPRLAKLEAEGLVT-HA 63 Query: 118 EEGGKKQIALTEQGAQWLE-----------ENREQVEMIEERIKARCVGAALRQNPQMKR 166 EGG+K ++T+ G + L E R+ V + I+ GAA R M+ Sbjct: 64 TEGGRKVYSITDAGREELAGRGGELADLELEIRDSVSELAAEIRDDVRGAAGRLRSDMRA 123 Query: 167 A 167 A Sbjct: 124 A 124 >UniRef50_A7HN08 Transcriptional regulator, PadR-like family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN08_FERNB Length = 124 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 7/114 (6%) Query: 43 CGGRHGRGGGR---RQRFFGHGE-LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPG 98 CG +HG+GG + F G+ L VIL +LS+ HGYEL + ++ + + P Sbjct: 5 CGCQHGQGGNIHRCEETGFSTGDFLTAVILKLLSQKPMHGYELYEKLQQVAYYPFKHDPS 64 Query: 99 VIYPTLDFLQEQSLITIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERI 149 VIY L L+ +I + EEG +K ++T+ G ++L E + ++E Sbjct: 65 VIYNILRKLEHHGIIEFKVEEGNGGLRKVYSITDNGIKYLNNLLELINTLKESF 118 >UniRef50_C7QBA1 Transcriptional regulator, PadR-like family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QBA1_CATAD Length = 277 Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 53/93 (56%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 FGHG LRL +L +L+ HGYE+I+ ++ QG Y PS G +YP L L+ + LI Sbjct: 5 FGHGRLRLYLLKLLAESPKHGYEIIQQLKERFQGLYAPSAGTVYPRLSRLESEGLIRHET 64 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIK 150 +E G+K +T+ G L + ++ +E I+ Sbjct: 65 DERGRKVYHITDAGRTELAARADDMDALETEIR 97 >UniRef50_Q2FP38 Transcriptional regulator, PadR family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FP38_METHJ Length = 159 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 4/77 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G+G L+L++L ILS +G EL+ I+ ++ G++ PSPG IYP L + +LI R Sbjct: 21 FRGYGGLKLLVLYILSEGPKNGAELMDTIDMMSHGHWKPSPGSIYPLLSKAVDDNLIVKR 80 Query: 117 EEEGGKKQIALTEQGAQ 133 + ++ LT+ G + Sbjct: 81 VD----RKYELTDAGFE 93 >UniRef50_Q9RTB9 Putative uncharacterized protein n=2 Tax=Deinococcus radiodurans RepID=Q9RTB9_DEIRA Length = 104 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 3/73 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +LR+++L +L+R HGY + +AI+ ++G T G++YP L L+ + L+ E++ G Sbjct: 6 QLRMLVLAVLARQPEHGYAIAQAIQARSEGLLTAREGLLYPVLHALEAEGLVVSAEQQVG 65 Query: 122 ---KKQIALTEQG 131 +++ LTEQG Sbjct: 66 GRTRREYRLTEQG 78 >UniRef50_D1XDB7 Transcriptional regulator, PadR-like family n=8 Tax=Streptomyces RepID=D1XDB7_9ACTO Length = 335 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LRL +L +L HGYE+I+ +E QG Y PS G +YP L L+ + L+T Sbjct: 4 VFAHGRLRLYLLKLLDEAPRHGYEVIRLLEERFQGLYAPSAGTVYPRLAKLEAEGLVT-H 62 Query: 117 EEEGGKKQIALTEQG 131 EGG+K ++T+ G Sbjct: 63 ATEGGRKVYSITDAG 77 >UniRef50_Q465T5 Transcriptional regulator, PadR family n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q465T5_METBF Length = 155 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 8/102 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG-- 120 L+ ++L I+ +HGY++IK +E + G + PS G IYP L+ L+ + I + EG Sbjct: 20 LKYIVLKIIKEKPTHGYDIIKTVELRSNGRWIPSAGSIYPILEKLESKGFI---QSEGIE 76 Query: 121 GKKQIALTEQGAQWLEE-NREQVEMIEERIKARCVGAALRQN 161 +K +T +G + L+ +E++E++ E +R V + N Sbjct: 77 RRKVYTITPKGVKGLDRMTQEKLELLNEM--SRIVNNVIEGN 116 >UniRef50_A4YGH7 Transcriptional regulator, PadR family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGH7_METS5 Length = 151 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 LR VIL L+ +G E++K IE++T+G + PSPG +YP L + ++ IR E GK Sbjct: 15 LRFVILFSLNESPKNGIEIMKEIESMTKGWWRPSPGSLYPMLAKMSQEGF--IRRREDGK 72 Query: 123 KQIA 126 ++ Sbjct: 73 YELT 76 >UniRef50_B8D3Z1 Transcriptional regulator, PadR-like family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3Z1_DESK1 Length = 151 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE-EGGKK 123 L+ILD+ HGY L+K I T +PG+IYP L + E+ LI E E G++ Sbjct: 13 LLILDMSRGGRIHGYYLLKKIREET--GLPVNPGLIYPLLKGMVEKGLIKAEESFEKGRR 70 Query: 124 QIA--LTEQGAQWLEENREQVEM 144 +I +TE+G ++LEEN++++E+ Sbjct: 71 KIVFRITEKGEKYLEENKQELEI 93 >UniRef50_D0LFT7 Transcriptional regulator, PadR-like family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LFT7_HALO1 Length = 107 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 R ++L L+ + HGYE+ + +E + G +T S G +YP L L+++ L++ E G Sbjct: 10 RFMVLLALAHEPKHGYEIARYLEERSGGYFTMSYGALYPVLHRLEKEKLVSATWCEAGGT 69 Query: 122 --KKQIALTEQGAQWLEENREQVEMI 145 KK LT +G L E RE + Sbjct: 70 RKKKVYTLTAKGQAALREEREDFDAF 95 >UniRef50_A8LAZ7 Transcriptional regulator, PadR-like family n=9 Tax=Actinomycetales RepID=A8LAZ7_FRASN Length = 325 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 24/161 (14%) Query: 48 GRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFL 107 G G GR R G++R +L +L+ + HGY++I + + + G + PSPG +YP L L Sbjct: 126 GPGFGRGARV-ARGDVREALLALLAEEPMHGYQMIGELASRSGGVWRPSPGSVYPVLSLL 184 Query: 108 QEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEE------------RIKARCVG 155 ++ L+ EE G++ LT+ G +E + E R A VG Sbjct: 185 ADEGLVRA-EERDGRRVFHLTDAGRAHVEARAGTAKPWETAAASADDETTALRTLAFGVG 243 Query: 156 AALRQNPQMKRALDNFKAVLDL---------RVNQSDISDA 187 AA+ Q Q A D A DL R+ D++D+ Sbjct: 244 AAVVQVAQAGDA-DQIAAARDLLTETRRGLYRILAGDLTDS 283 >UniRef50_B0R6W2 Putative uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6W2_HALS3 Length = 176 Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI--TIREE 118 G + ++L++L +GYE++K IE+L+ G++ PS G +YP L +E E+ Sbjct: 9 GLVSYLVLELLDEQPRYGYEILKEIESLSGGHWEPSYGSVYPILYKFEENGYAERLDVED 68 Query: 119 EGGKKQIALTEQGAQWLEENREQV 142 E +K LT+ G + L RE+V Sbjct: 69 EPDRKYFELTDAGREELAAKREEV 92 >UniRef50_A9WPK9 Transcriptional regulator, PadR family protein n=5 Tax=Micrococcineae RepID=A9WPK9_RENSM Length = 212 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LRL +L +L HGY++I+A+ + G Y+PS G +YP L L+E+ L+ Sbjct: 4 VFAHGALRLYLLALLEEGPKHGYDVIRALSDRFGGTYSPSAGTVYPRLAKLEEEGLVGT- 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA--RCVGAALRQN 161 +G + +T+ G L+ R+++ +E+ I A R + LRQ+ Sbjct: 63 TTDGRRTTYNITDSGRAELDRRRDELNEVEQDISASVRRLADTLRQD 109 >UniRef50_B9LRB4 Transcriptional regulator, PadR-like family n=4 Tax=Halobacteriaceae RepID=B9LRB4_HALLT Length = 210 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI--TIREE 118 G + ++L++L+ +GYEL+ I ++ G++ PS G +YP L +E+ + R + Sbjct: 9 GLISYLVLELLAERPRYGYELLGDITEISGGHWEPSYGSVYPILYKFEEEGVAERVERAD 68 Query: 119 EGGKKQIALTEQGAQWLEENREQV 142 E +K ALT+ G + L E R ++ Sbjct: 69 EPDRKYFALTDAGREELVEKRREI 92 >UniRef50_A6URE9 Transcriptional regulator, PadR-like family n=1 Tax=Methanococcus vannielii SB RepID=A6URE9_METVS Length = 131 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 3/82 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG-G 121 ++++I+ L ++ HGY LI + + + + S +IYP L L+ + LI I + + G Sbjct: 11 VKILIMHDLEKEPLHGYSLISKLGD--KLGISMSASMIYPILSSLKTKGLIEIEKTDVRG 68 Query: 122 KKQIALTEQGAQWLEENREQVE 143 KK LTE G+++L EN E+VE Sbjct: 69 KKVYRLTENGSKFLYENSEKVE 90 >UniRef50_A1RWE5 Transcriptional regulator, PadR family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWE5_THEPD Length = 118 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 +R++ + ++L L +L+ + HGYEL++ +E + + PS IYP L L+ L Sbjct: 11 KREKIRVNTVIKLYTLILLAEGEKHGYELMRTLEQMIEAPIGPSQ--IYPFLRNLENAGL 68 Query: 113 ITIREE-EGGKKQIALTEQGAQWLEENREQ 141 +T RE KK +LT QG ++L+E E+ Sbjct: 69 VTSREAGSRDKKVYSLTPQGYEFLKEILEK 98 >UniRef50_C4RQF7 PadR-family transcriptional regulator n=2 Tax=Micromonospora RepID=C4RQF7_9ACTO Length = 207 Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 77 HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLE 136 HGYELI+ +E+ G Y PS G IYP L L+ + +T GG+K +TE G L Sbjct: 24 HGYELIRLLEDRFLGLYAPSAGTIYPRLQRLEAEGRVT-HTAAGGRKVYEITEAGQAELR 82 Query: 137 ENREQVEMIEERIKA 151 + ++ +E I + Sbjct: 83 QRAGELATLESDINS 97 >UniRef50_A7I725 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I725_METB6 Length = 166 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 3/80 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ-SLITIREEEGG 121 L L ++ LS+ + GY+++K + LT+GN+ PS G +YP L L+E+ ++++ + G Sbjct: 19 LALYVIHSLSKGEKSGYDILKELGELTEGNWVPSKGTLYPLLHQLEEEGQIVSVPKTTGA 78 Query: 122 KKQIA--LTEQGAQWLEENR 139 + + LT G + L+ R Sbjct: 79 RARAVFCLTPLGKETLKRIR 98 >UniRef50_Q97A48 Putative uncharacterized protein TVG0986825 n=1 Tax=Thermoplasma volcanium RepID=Q97A48_THEVO Length = 151 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L+ IL ++S +G E++ IE + G + PSPG +YP L+ L+ L+ IR E+G Sbjct: 12 GNLKYWILYLVSTKPMNGAEVMDEIERHSFGMWRPSPGSVYPALEQLEADGLV-IRNEDG 70 Query: 121 GKKQIALTEQGAQ 133 + A TEQG + Sbjct: 71 ---RYAATEQGKE 80 >UniRef50_A0RKG2 Transcriptional regulator, PadR family n=50 Tax=Firmicutes RepID=A0RKG2_BACAH Length = 188 Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 5/102 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI--TIREE 118 G + +++L I+ + D++GYE+I+ ++ + YT S G +YP L L+++ LI E Sbjct: 87 GSIDILLLSIIKQRDTYGYEIIQKLKENSNDLYTMSQGTLYPALKRLEQKDLIHSYWGES 146 Query: 119 EGGKKQ--IALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 E G K+ +T G + LEE + + IK C AL Sbjct: 147 ETGMKRKFYRITTSGKKMLEEKLTAWDSVTALIKT-CQKGAL 187 >UniRef50_A0RYA5 Transcriptional regulator n=3 Tax=Thaumarchaeota RepID=A0RYA5_CENSY Length = 268 Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 12/135 (8%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G R IL++L G E+I ++G++ PSPG+IYP L L ++ ++ EE Sbjct: 115 RGFSRYFILEVLQESPCTGKEIIDHATRKSEGDWKPSPGLIYPLLGRLLDEGMV---EET 171 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD--- 176 GG K +TE+G + + V I E ++ + A N A+D + + Sbjct: 172 GGGK-YGITEKG----KATAQDVGKIHEAVRKQLDVLARVGNAGRFVAMDLLERITVMGT 226 Query: 177 -LRVNQSDISDAQIK 190 L N S+++D +++ Sbjct: 227 MLSANASNMTDQEVR 241 >UniRef50_B0NZB0 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0NZB0_9CLOT Length = 112 Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 42/63 (66%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++ ++ L +L ++D +GY+L ++I+++T G + G +YP L LQ++ I+ R+ + G Sbjct: 13 KIEMLFLKVLEQEDCYGYQLTQSIQDITNGQIKIAEGTMYPILYKLQDKGYISDRQVKVG 72 Query: 122 KKQ 124 K+Q Sbjct: 73 KRQ 75 >UniRef50_A9A325 Transcriptional regulator, PadR-like family n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A325_NITMS Length = 169 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 4/70 (5%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK 123 R IL++L + + G E+I + G + PSPG+IYP L L ++ L I+E + GK Sbjct: 19 RYFILELLKKKEQTGKEIIDYAVEQSNGIWKPSPGLIYPLLGRLLDEGL--IQETKDGKY 76 Query: 124 QIALTEQGAQ 133 Q LTE+GA+ Sbjct: 77 Q--LTEKGAE 84 >UniRef50_Q2RGC9 Transcriptional regulator, PadR family n=3 Tax=Bacteria RepID=Q2RGC9_MOOTA Length = 372 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 + IL +L HGYE+ + + +T+G TP+ G IYP L +E +T E G Sbjct: 19 KFFILRVLYTQPMHGYEIARTVAQVTRGCCTPTEGTIYPVLREFEEGGYVTSSLEIAGGR 78 Query: 122 -KKQIALTEQG 131 +K LT +G Sbjct: 79 ERKVYTLTPKG 89 >UniRef50_B9XHE1 Transcriptional regulator, PadR-like family n=2 Tax=bacterium Ellin514 RepID=B9XHE1_9BACT Length = 112 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 34/55 (61%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 +IL ILS D +GY LI+ ++ L+ G S G++YP L +++++ LI EG Sbjct: 14 LILSILSEGDCYGYALIQRVQELSDGEILWSEGMLYPVLHWMEKEKLIESEWREG 68 >UniRef50_D1YY91 Putative PadR-like family transcriptional regulator n=1 Tax=Methanocella paludicola SANAE RepID=D1YY91_METPS Length = 145 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%) Query: 67 ILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIA 126 IL L+ +G E++ AIE+++ G++ PSPG IYP L + E+ L IR+ E G+ + A Sbjct: 27 ILYTLNDSPKNGAEIMDAIESMSYGSWRPSPGSIYPLLVKMVEEGL--IRKREDGRYEAA 84 Query: 127 LT 128 T Sbjct: 85 DT 86 >UniRef50_Q2BFH1 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH1_9BACI Length = 99 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 34/60 (56%) Query: 76 SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWL 135 +HGY+L+ AI ++ G PG +Y L +Q+ LI++ E +G +K +T G Q L Sbjct: 16 NHGYQLMHAIAEVSHGRVNMGPGTLYGVLSRMQKDGLISLAENDGRRKTYKITTDGEQAL 75 >UniRef50_B2A0I7 Transcriptional regulator, PadR-like family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0I7_NATTJ Length = 121 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 ++ ++L L + SHGY ++ ++ TQG TP+ G +YP L L E+ ++ E Sbjct: 18 IKFLVLRTLKTNPSHGYGILNQVKEFTQGCCTPTYGSVYPILKELCEEGYAEVKFETVNN 77 Query: 122 --KKQIALTEQGAQ 133 +K LTEQG Q Sbjct: 78 RERKVYYLTEQGEQ 91 >UniRef50_Q2FNW6 Transcriptional regulator, PadR family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNW6_METHJ Length = 162 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 7/127 (5%) Query: 78 GYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIA--LTEQGAQWL 135 GYEL+K I+ T + P+ G +YP L L+++ LI ++ E G + +I LTE G Q L Sbjct: 36 GYELLKEIDETTDSTWVPNKGTLYPLLKSLEQEGLIQVK-EVGKRSKITFELTEDGRQML 94 Query: 136 EENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAV 195 + + E E R+ L + + ++D+R D+ + + I + Sbjct: 95 STLKGKKEEAETRV---TFFKKLHREVFGEENFSFINFMMDVRFYVEDLPEEKKPAAIKI 151 Query: 196 IDRAAFD 202 + + AFD Sbjct: 152 L-QTAFD 157 >UniRef50_Q9RT15 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RT15_DEIRA Length = 107 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G L L++L IL R +G+ +I+ ++ T G + G +YP L L+ L+ + E Sbjct: 8 GNLDLILLSILERRPLYGFAIIQEAKDRTDGYFEFKEGSLYPALHRLEVDGLLAAQFGEA 67 Query: 121 G-----KKQIALTEQGAQWLEENREQVEMI 145 G +K A+T+ G Q L + RE+ + Sbjct: 68 GRNGKPRKYYAITDLGRQRLAQKREEFQTF 97 >UniRef50_A6BZG9 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZG9_9PLAN Length = 110 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 4/99 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT--IREE 118 G + ++IL+++S ++GYE+ + + N + + G +YP L LQ + L+ RE Sbjct: 8 GTMEMLILELVSEGPTYGYEITQRVTNRSANEFELKEGSLYPALHKLQRKKLLKSFWREV 67 Query: 119 EG-GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 +G +K LT QG + L E R++ + I+ R +GA Sbjct: 68 DGRRRKYYELTIQGQKALNEKRQEWKQFSSAIE-RILGA 105 >UniRef50_C8Q356 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8Q356_9ENTR Length = 110 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 + +VIL L R SHGY LI+ I LT G + G +YP L ++++ LI E Sbjct: 13 IEMVILAALERGPSHGYALIELIHQLTDGVLSFQEGTVYPLLHRMEQRGLIGAEWEIAPS 72 Query: 123 KQ----IALTEQGAQWLEENRE 140 K+ LT++G Q L RE Sbjct: 73 KRKRRVYQLTKEGQQELVRKRE 94 >UniRef50_C3N9F3 Transcriptional regulator, PadR-like family n=11 Tax=Sulfolobus RepID=C3N9F3_SULIY Length = 153 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G LRL+ L +L + G ++I I ++ G + PSPG IYP L+ + E+ TI Sbjct: 27 KGRLRLMTLWLLWQSPKRGIDIIDDINKMSWGFWKPSPGSIYPLLNKMVEEG--TIERTS 84 Query: 120 GGKKQIAL 127 GK +I + Sbjct: 85 DGKYKITV 92 >UniRef50_C8WGP1 Transcriptional regulator, PadR-like family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP1_EGGLE Length = 113 Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR---- 116 G L +++L +L ++ +GY+LI + + + G G +YP L L++ L+T R Sbjct: 12 GALDMLVLKLLQHEEKYGYQLISELRDRSNGALALKEGTLYPILYRLEDGGLVTSRMSAH 71 Query: 117 -EEEGGKKQIALTEQGAQWLEENRE 140 +E +K A+TE G L E E Sbjct: 72 VAKEPARKYYAITEAGRDALREMYE 96 >UniRef50_B2TNP2 Lineage-specific thermal regulator protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TNP2_CLOBB Length = 141 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 7/92 (7%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI---TIREE 118 +L ++IL+++ R D +GY +IK + ++G + G IYP L L+ ++L+ IRE Sbjct: 41 DLEILILELIQRKDMYGYAIIKELGIKSKGTFLMQEGEIYPILHCLEGKALLESYWIRES 100 Query: 119 EG-GKKQIALTEQGAQWLE---ENREQVEMIE 146 + KK LT +G ++L+ E+ + ++M+E Sbjct: 101 DNIDKKYYRLTRRGREYLKFRAEDTKNIKMLE 132 >UniRef50_C5CHI3 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHI3_KOSOT Length = 163 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 L VIL L GY+L K I+ T +T S G +YP L L++++ + I+E E GK Sbjct: 2 LDYVILGFLRIMPMTGYQLKKNIDVSTSNFWTASFGGLYPALARLEKKNWVKIKESE-GK 60 Query: 123 KQIALTEQG 131 K ++TEQG Sbjct: 61 KIYSITEQG 69 >UniRef50_C4F9Z1 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9Z1_9ACTN Length = 116 Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI---R 116 G + +IL LS+ DS+GYE++K+I + G Y +Y +L L+ Q + Sbjct: 12 RGNIDAIILKTLSKGDSYGYEILKSIGTASLGEYEMKEPSLYTSLKRLEGQKFVESFWGN 71 Query: 117 EEEGG-KKQIALTEQGAQWLEENREQVEMI 145 E +G +K LT+ GAQ L E E+ E + Sbjct: 72 ETQGARRKYYRLTDAGAQELVEATERWERV 101 >UniRef50_C7DGB3 Transcriptional regulator, PadR-like family n=2 Tax=unclassified Euryarchaeota RepID=C7DGB3_9EURY Length = 121 Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%) Query: 77 HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG----GKKQIALTEQGA 132 HG+EL++ I T G + P P IYP L++L+ I +E +KQ ++T++G Sbjct: 35 HGFELMEQIFERTGGMWRPGPAAIYPALEWLESNGYIKSDSQENRPEKTRKQYSITKKGT 94 Query: 133 QWLEENREQVEMIEERI 149 L + + + I +R+ Sbjct: 95 TALSDYEKSAKEIRKRM 111 >UniRef50_B1L511 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L511_KORCO Length = 109 Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G RL+IL +L HGY+++K +E +T + P Y L+ ++ + L++ Sbjct: 11 FLRGSYRLLILALLEHSRMHGYQILKLVERIT--GHKPKISTFYSILNEMERRGLLSSYI 68 Query: 118 EEGGKKQIALTEQGAQWLEENREQV 142 EE K+ LTE+G L E R +V Sbjct: 69 EE-DKRIYGLTEKGRHSLNEFRSRV 92 >UniRef50_D1YZ73 PadR-like family transcriptional regulator n=2 Tax=Methanocella paludicola SANAE RepID=D1YZ73_METPS Length = 175 Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 7/112 (6%) Query: 57 FF---GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 FF L +L +L + HGY L++ IE TQG++ PS IY L+ L+ I Sbjct: 8 FFENPSRASLNYFVLMLLRTNPKHGYMLMQDIERHTQGHWRPSHSAIYKLLNRLETDGYI 67 Query: 114 TIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 T EE+ G ++ ++++G LE + E + + A R NP Sbjct: 68 TSWEEKDGERVRRVYQISKEGVALLEASDRDFESFINAFISSLLEAE-RVNP 118 >UniRef50_Q47QT2 Transcriptional regulator, PadR family n=2 Tax=Actinomycetales RepID=Q47QT2_THEFY Length = 240 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ GYE+IK + G + SPG +YP L L+ + L+T+ G Sbjct: 86 DVRTGILLLLAERPMSGYEIIKEGRERSNGVWRLSPGSVYPVLQQLESEGLVTLAATGVG 145 Query: 122 KKQ-IALTEQGAQWLEE 137 +++ LTEQG ++ E Sbjct: 146 RRRPYELTEQGHAYVAE 162 >UniRef50_B3WAQ0 Transcriptional repressor PadR (Regulator of phenolic acid metabolism PadR) n=6 Tax=Lactobacillus RepID=B3WAQ0_LACCB Length = 179 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 4/77 (5%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT----IREEEGG 121 +IL +L + GYEL + +N+ Y S G+IYPTL L++ L++ ++ Sbjct: 6 IILGLLYKHSRTGYELNEVFKNIFSHFYDASFGMIYPTLRRLEKNGLVSKKMVVQSGRPN 65 Query: 122 KKQIALTEQGAQWLEEN 138 K Q A+TE+G + E++ Sbjct: 66 KNQYAITEEGKRVFEDS 82 >UniRef50_Q9V0W9 Putative uncharacterized protein n=2 Tax=Pyrococcus RepID=Q9V0W9_PYRAB Length = 132 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 5/57 (8%) Query: 95 PSPGVIYPTLDFLQEQSLI-TIREEEGGKKQIALTEQGAQWLEEN----REQVEMIE 146 PSPG IYP L L++ LI +I E + KK ++TE+G ++LEE+ RE +E++E Sbjct: 13 PSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEELREALELVE 69 >UniRef50_A8L6H3 Transcriptional regulator, PadR-like family n=5 Tax=Actinomycetales RepID=A8L6H3_FRASN Length = 132 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE-- 119 E ++L L+ HGY +I+ + +++ G T PG +Y LD L + L+ + EE Sbjct: 8 EPTFLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVV 67 Query: 120 GG--KKQIALTEQGAQWLEENREQV 142 G ++ +LT+ GA L E E++ Sbjct: 68 NGRLRRYYSLTDDGAGALTEQTERL 92 >UniRef50_UPI0001C35727 PadR-like family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35727 Length = 158 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G +++L +L+ D +GYE+I+ + + + G +YP L L+++ +T EEE Sbjct: 10 GSTSMLLLKLLTEKDMYGYEMIETLRKKSNDVFELKAGTLYPLLHSLEQKGYLTSYEEEA 69 Query: 121 G---KKQIALTEQGAQWLEENREQ 141 +K ++T +G ++L+ E+ Sbjct: 70 SGKVRKYYSITGEGKRYLKGKEEE 93 >UniRef50_A4BBA4 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BBA4_9GAMM Length = 180 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ- 124 +IL +LS + Y+L KA+E T Y S G I+P L L++ +T+R GK++ Sbjct: 5 IILGLLSFSELSLYDLRKAMEQSTAFFYNASTGSIHPALKKLEKNGWVTVRTVSQGKREK 64 Query: 125 --IALTEQGAQ----WLEE 137 A TE GAQ W+ E Sbjct: 65 KLYARTEAGAQTFQAWISE 83 >UniRef50_A8M7C7 Transcriptional regulator, PadR-like family n=2 Tax=Bacteria RepID=A8M7C7_SALAI Length = 117 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---- 121 ++L +L + DS+GYE+I +I +L+ G G++YP L L Q LI + Sbjct: 15 LVLAVLEQGDSYGYEIINSIRDLSGGELEWKQGMLYPLLHRLASQGLIESYQGVSAAGRV 74 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K L G + LE R+ ++I + A Sbjct: 75 RKYYRLLPVGRRQLETCRQNFDLISSTLAA 104 >UniRef50_B4D7I1 Transcriptional regulator, PadR-like family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7I1_9BACT Length = 115 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 4/84 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR--EEEGGKK 123 +IL IL+ +S+GY +I+ I+ +Q + G++YP L L+ + I R E E G+K Sbjct: 19 LILSILAEGESYGYAIIQEIKTRSQNRMEWTDGMLYPVLHRLERKGQIKSRWVEAESGRK 78 Query: 124 Q--IALTEQGAQWLEENREQVEMI 145 + +L + G + L E+RE ++ Sbjct: 79 RKYYSLKQPGKKALAEHREHWAIV 102 >UniRef50_A6LMA8 Transcriptional regulator, PadR-like family n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMA8_THEM4 Length = 120 Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Query: 76 SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---KKQIALTEQGA 132 SHGYEL++ + N+ PGVIY L L+E IT EEG +K +T++G Sbjct: 31 SHGYELVQRLYEANFYNFRHDPGVIYNILRRLEEGGFITYEIEEGDGPFRKVYKITDEGI 90 Query: 133 QWLE 136 +LE Sbjct: 91 DYLE 94 >UniRef50_C5CG93 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG93_KOSOT Length = 170 Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 10/103 (9%) Query: 61 GELRLVILDILSRD-DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G LR +L I+ + HGY +++ IE + + PSPG IYP L+ L LI E Sbjct: 4 GFLRFAVLGIVVKKYPVHGYRIMELIEE--KMGFKPSPGSIYPVLNKLVSDGLIY-SETS 60 Query: 120 GGKKQIALTEQGAQWLEENREQ-VEMIEERIK-----ARCVGA 156 G +K TE+G + EE Q E++ K AR VG Sbjct: 61 GKRKLYYPTEKGKKIHEELESQRAELVNSHRKFAESLARLVGV 103 >UniRef50_C7QKF8 Transcriptional regulator, PadR-like family n=4 Tax=Actinomycetales RepID=C7QKF8_CATAD Length = 123 Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 4/99 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT--IREE 118 G L ++L +L+ SHGY LI+A+ + + G + G +YP L L+ L+ E Sbjct: 8 GHLDGLVLAVLATGPSHGYGLIEALRDRSGGVFDLPEGSVYPALHRLERAGLVASGWSEV 67 Query: 119 EGGKKQI-ALTEQGAQWLEENREQVEMIEERIKARCVGA 156 G ++++ +LT G++ E+ R + ++ R GA Sbjct: 68 AGRRRRVYSLTASGSRAAEDRRTEWRSFSAAVE-RVFGA 105 >UniRef50_B5IBP0 Transcriptional regulator, PadR family, putative n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBP0_9EURY Length = 112 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI-- 113 R G + L IL ILSR +G E+IK +++L+ G G +YP L ++ + LI Sbjct: 6 RELKKGLIELSILSILSRGKKYGLEIIKELDSLSNGFLKIKEGTLYPALHRMEARGLIES 65 Query: 114 --TIREEEGGKKQIALTEQGAQWLEENRE 140 + E +K LT++G + EE +E Sbjct: 66 EWVLVESGIPRKYYKLTDEGIKKYEEGKE 94 >UniRef50_A7IME8 Transcriptional regulator, PadR-like family n=2 Tax=Alphaproteobacteria RepID=A7IME8_XANP2 Length = 152 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 + IL +L + HGY++ +A+E T G +P+ G IYP L +E +T E Sbjct: 42 KFFILCVLHQRPMHGYDVARAVEATTNGCCSPAEGTIYPVLREFEEGGYVTAASEVVSGR 101 Query: 122 -KKQIALTEQG 131 +K LT++G Sbjct: 102 ERKVYTLTDKG 112 >UniRef50_Q0W129 Predicted transcription regulator (PadR-like family) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W129_UNCMA Length = 171 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 L +L +L HGY L++ IE T G++ PS IY L+ L+ IT EE+ Sbjct: 15 ASLNYFVLMLLRNSPKHGYMLMQDIERHTGGHWRPSHSAIYKLLNRLEADGYITSWEEKD 74 Query: 121 G---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 G ++ ++E G + LEE+ E + + A R NP Sbjct: 75 GERARRVYKISETGKKLLEESERDFESFINAFISSLLEAE-RVNP 118 >UniRef50_B0TAS3 Transcriptional regulator, padr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAS3_HELMI Length = 159 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%) Query: 50 GGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQE 109 GGGR G V+L + R +HGYEL++ +E + + P P VIY L L+E Sbjct: 2 GGGRSDSLVFPG----VLLSLRQRP-AHGYELMEKLEQMHFVSALPDPAVIYRYLRRLEE 56 Query: 110 QSLITIREEEG----GKKQIALTEQGAQWLE 136 + ++ R E G +K +LT +G +L+ Sbjct: 57 EGMVESRLEPGQGGPARKVYSLTAEGESYLQ 87 >UniRef50_C6A0Y4 Transcription regulator, PadR-like family n=7 Tax=Thermococcaceae RepID=C6A0Y4_THESM Length = 158 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 21/121 (17%) Query: 77 HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-----REEEGGKKQIALTEQG 131 HGY ++ +E G TPSPG IYP L L+ LI + RE KK +T++G Sbjct: 31 HGYGIMYELET-RYGIPTPSPGAIYPILSGLKRNGLIRVAGKGKRE----KKLYQITDRG 85 Query: 132 AQWLEENR----EQVEMIEERIKARCVGAALRQNPQMKRAL-DNFKAVLDLRVNQSD-IS 185 ++L+E++ E + MIE + R +G ++K A+ + F A+ L Q +S Sbjct: 86 KEYLDEHKNELFEVIRMIESFKEFRSLGGN-----ELKEAIKEVFMAIPSLTEEQKKALS 140 Query: 186 D 186 D Sbjct: 141 D 141 >UniRef50_A8AAT8 Transcriptional regulator, PadR family n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAT8_IGNH4 Length = 124 Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R + L L +L LS +GY+L+K ++ LT + P IYP L + E+ L+ + Sbjct: 14 RSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYPLLKKMVEEGLLDV 73 Query: 116 REEEGGKKQIALTEQG---AQWLEENREQVEMIEERI 149 +E G +LTE G + L N E + +EE I Sbjct: 74 -DEHG---VYSLTEAGRAVLKALRRNSEAINELEENI 106 >UniRef50_B0MSB8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MSB8_9FIRM Length = 115 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 4/98 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G L ++IL +L ++ +GY+L + I + G + + G +YPTL L ++ LI R Sbjct: 8 FKRGTLEMLILHLLKGEEMYGYQLTQEIGKRSNGTFRITEGSMYPTLYRLLDKELIADRL 67 Query: 118 EEGGKKQIA----LTEQGAQWLEENREQVEMIEERIKA 151 E G+++ + +G ++L++ ++ E+ I A Sbjct: 68 ELVGRRRTRVYYHIEPKGLEYLDKLEKEYELTSAGIDA 105 >UniRef50_C8VZL9 Transcriptional regulator, PadR-like family n=2 Tax=Firmicutes RepID=C8VZL9_DESAS Length = 114 Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 4/85 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE--E 118 G +++L +L R+ +GY++IK IEN + G + G +YP L L+ +I Sbjct: 10 GSTVILVLSLLDREPMYGYQMIKEIENKSSGVFKFKEGTLYPILHSLEADGMINANWWGN 69 Query: 119 EGG--KKQIALTEQGAQWLEENREQ 141 EG +K +T++G +L++ +++ Sbjct: 70 EGSRQRKYYQITKKGNLYLKDKQQE 94 >UniRef50_C1QEA4 Transcriptional regulator, PadR family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QEA4_9SPIR Length = 109 Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI---RE 117 G + V+L L +DS+GYEL K I + T G Y + +Y + L+ + LI E Sbjct: 10 GHIDAVVLHFLKDNDSYGYELSKLITDKTNGEYEINGQTLYSAIRRLEGKKLIESYWGNE 69 Query: 118 EEGG-KKQIALTEQGAQWLEENRE 140 +GG +K +TE+G +L+E E Sbjct: 70 SQGGRRKYYKITEEGKSFLKEETE 93 >UniRef50_Q08UR2 Putative transcriptional regulator n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08UR2_STIAU Length = 182 Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE---EGG 121 L+IL +L R +HGY + + I ++ S G +YP L L +I+++EE +GG Sbjct: 4 LIILSLLMRAPTHGYLIAQVINDVIGPFARASNGRLYPLLTKLVASGVISVQEEAASDGG 63 Query: 122 K--KQIALTEQG-AQWLEENRE 140 + + A+T G A++LE R+ Sbjct: 64 RISRSFAITSPGRARFLELMRD 85 >UniRef50_D1S466 Transcriptional regulator, PadR-like family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S466_9ACTO Length = 112 Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 RR ++ G L L +L +LSR +S+GYEL +A+ G G +YP L LQ L Sbjct: 5 RRAQWL-RGVLDLCVLALLSRGESYGYELSQALR--AHGLGAVQGGTLYPVLLRLQRSGL 61 Query: 113 ITIREEEGG 121 +T EGG Sbjct: 62 LTAHWREGG 70 >UniRef50_Q1AUC4 Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUC4_RUBXD Length = 127 Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 7/95 (7%) Query: 54 RQRFFGHGELR----LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQE 109 R+ F G + R L+IL ++S+ +G LI+ I LT G + SP +YP L ++E Sbjct: 12 REIFIGEVKTRSIFPLLILHLVSKRPEYGNSLIRKIGELTGGVMSVSPNTVYPLLRRMEE 71 Query: 110 QSLITIREEEG---GKKQIALTEQGAQWLEENREQ 141 + +T E+ ++ +T +G + EE +E+ Sbjct: 72 KGYLTAEWEDPDTRSRRFYTITPRGREKYEEMKER 106 >UniRef50_Q6L022 Hypothetical transcriptional regulatory protein n=1 Tax=Picrophilus torridus RepID=Q6L022_PICTO Length = 143 Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 ++ILD + ++ Y +IK I Y PS G+IYP+L LQ ++ I I+ E G K Sbjct: 7 MLILDQIYYEEKKPYGIIKGIIEKFDERYKPSTGMIYPSLRRLQRENYI-IKMESGYK-- 63 Query: 125 IALTEQGAQWLEEN 138 +T++G ++ +N Sbjct: 64 --ITDKGKEYFNKN 75 >UniRef50_Q9V1D5 Predicted transcriptional regulator n=2 Tax=Euryarchaeota RepID=Q9V1D5_PYRAB Length = 114 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 77 HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---KKQIALTEQGAQ 133 HGY + K +E LT G PS G +Y L L++ L+ E G ++ +TE G + Sbjct: 33 HGYAIRKRLEELTDGKLVPSEGALYSILKMLKKYKLVEDYWAEVGGRVRRYYQITELGKE 92 Query: 134 WLEENRE---QVEMIEERI 149 L+E +E ++ +I ERI Sbjct: 93 VLDEIKEEIREIRIILERI 111 >UniRef50_B5YBF9 Transcriptional regulator, PadR family, putative n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YBF9_DICT6 Length = 124 Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 20/116 (17%) Query: 49 RGGGRRQRFFGHGE---LRLVILDILSRDDSHGYELIKAIENLTQGNYTP---------S 96 RG GR Q+ G LR +L LS+ + HGYEL+ I+ Y P Sbjct: 2 RGFGRWQKGMGFAPGFWLRAFVLVALSKKELHGYELLNMID-----EYFPEFCFCKGLSG 56 Query: 97 PGVIYPTLDFLQEQSLITIREEEG---GKKQIALTEQGAQWLEENREQVEMIEERI 149 G Y L L+ + LI R E G K+ +LT +G + EE E V+ +++RI Sbjct: 57 MGTGYRILRMLEMEGLIKSRWETGEGPAKRVYSLTSEGEKAKEEILEYVKEMKDRI 112 >UniRef50_C9AC80 PadR family transcriptional regulator n=4 Tax=Enterococcus RepID=C9AC80_ENTCA Length = 114 Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 L++L +L HGY ++K I L+QG + P +Y L L ++ I + E KK Sbjct: 17 LILLALLK--PKHGYLIMKQIHELSQGTFEIGPATMYTILKKLTKKGWIDLEESVDRKKI 74 Query: 125 IALTEQGAQWLEEN 138 +T +G Q LE++ Sbjct: 75 YQITPEGRQVLEKD 88 >UniRef50_D2QHL5 Transcriptional regulator, PadR-like family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHL5_9SPHI Length = 114 Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 4/90 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR----EEEGG 121 ++L IL+ +S+GYE+I+ I + G + G +YP L L+++ L+ + + E Sbjct: 16 LVLTILADGESYGYEIIRNIRLRSAGQLDVAEGTLYPVLRKLEQRGLVQTQWRTADNERQ 75 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K AL QG + L+ R MI + +++ Sbjct: 76 RKYYALKTQGREVLQAERANWNMINQLLQS 105 >UniRef50_UPI0001B57518 PadR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57518 Length = 128 Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 13/93 (13%) Query: 82 IKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQ 141 ++ I T + PSPG IYP L L+++ L+ EEGG++ LTE G RE Sbjct: 1 MQEIRRRTNDEWRPSPGSIYPILQQLEDEGLVRT-AEEGGRRVAHLTEAG-------REH 52 Query: 142 VEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 V EE A +A R+ P D F A+ Sbjct: 53 VAGREEEFAALWESSA-REEP----GADRFAAL 80 >UniRef50_Q5WGK7 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGK7_BACSK Length = 170 Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 38/70 (54%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 E + ++L ILS GYE+ K I+N + + S G IYP L L ++ ++ +G Sbjct: 4 EAKWIVLGILSGGCRTGYEIKKVIDNSFEHFWKMSYGQIYPALKTLVKEGYVSQIGSDGD 63 Query: 122 KKQIALTEQG 131 +K+ +TE G Sbjct: 64 RKEYEITEAG 73 >UniRef50_C3B6A2 Transcriptional regulator n=3 Tax=Bacillales RepID=C3B6A2_BACMY Length = 114 Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 16/115 (13%) Query: 45 GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTL 104 G +GG F G L L +L ++ R D +GYEL++ I N + S G +YP L Sbjct: 3 GTDWKGGLSLNVQFKKGVLELCVLALVKRKDCYGYELVQQISN----KFLISEGSVYPLL 58 Query: 105 DFLQE----QSLITIREEEGGKKQIALTEQGAQ--------WLEENREQVEMIEE 147 L + Q+ + E +K LT QG + W + R E+IEE Sbjct: 59 RRLTKEGYFQTYLKESTEGPPRKYYQLTNQGEEQLHLLVTDWRDFARGVQEIIEE 113 >UniRef50_C5CF63 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF63_KOSOT Length = 180 Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ- 124 VIL LS GY++ + + T Y S G IYPTL L+++ +T +E G+K Sbjct: 4 VILGFLSSGAMTGYDIKQVMSVSTSFFYDASYGSIYPTLKKLEKKGFVTSKEVVEGRKVK 63 Query: 125 --IALTEQG----AQWLEE 137 +LT++G +WLE+ Sbjct: 64 VFYSLTDKGRKEFLKWLEK 82 >UniRef50_A2BMT4 Predicted transcriptional regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMT4_HYPBU Length = 158 Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNY--TPSPGVIYPTLDFLQEQSLITIREEEGG 121 R ++L +L+ GYELIK + +L Y SPG +YP L L+E+ LI R E G Sbjct: 10 RYLVLMLLAEGPKTGYELIKQLRSLF-ARYGGRASPGTVYPVLRRLEEEGLIRSRLEPYG 68 Query: 122 ---KKQIALTEQGAQWLEE 137 +K LT +G + L E Sbjct: 69 ARVRKVYELTGEGLRALLE 87 >UniRef50_B7K746 Transcriptional regulator, PadR-like family n=3 Tax=Cyanobacteria RepID=B7K746_CYAP7 Length = 191 Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L L L +L R+ HGY L + +E L G + + G IYP L L+E+ + + EE G Sbjct: 2 LELATLGLLQREPLHGYRLKQQLELLMSGCISVNYGAIYPLLKRLEEKGFLEVCLEEDGH 61 Query: 122 ----KKQIALTEQG 131 +K +TE G Sbjct: 62 GGNTRKIYQITETG 75 >UniRef50_C7PGF5 Transcriptional regulator, PadR-like family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGF5_CHIPD Length = 111 Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%) Query: 61 GELRLVILDILSRDDS-HGYELIKAIENLTQGNYTPSPGVIYPTL 104 G + ++IL +L S +GYE+ + ++NLT+G S G +YPTL Sbjct: 9 GTIEIIILKLLVEKGSMYGYEITQQVKNLTKGKIVISEGTLYPTL 53 >UniRef50_B8FGB8 Transcriptional regulator, PadR-like family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGB8_DESAA Length = 178 Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 10/102 (9%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE-EGG 121 ++ IL +L +D HGY + + IE ++ + G IYP L L+++ LI++REE + G Sbjct: 3 VKYSILGLLHYEDMHGYRIKEHIEKNFGYMWSVNYGQIYPNLKKLEQEGLISMREEVQNG 62 Query: 122 -----KKQIALTEQG----AQWLEENREQVEMIEERIKARCV 154 KK +LT+ G +WL + E+ ++ + R V Sbjct: 63 KKGPPKKLYSLTDAGREAFQEWLFGSPERSMLLRDPFLMRFV 104 >UniRef50_C6QCV1 Transcriptional regulator, PadR-like family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCV1_9RHIZ Length = 113 Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ-EQSLITIR 116 F +G L++L +L + +GYEL++AI+ T GV+YP L L+ E +L + R Sbjct: 9 FLNGVPELLVLQLLKGREMYGYELVQAIKEATGETIVLGEGVVYPVLHMLEREGALKSRR 68 Query: 117 EEEGGKKQI--ALTEQG 131 + G+ +I +LT G Sbjct: 69 QSVSGRSRIYYSLTPVG 85 >UniRef50_A8SUL2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUL2_9FIRM Length = 142 Score = 40.0 bits (92), Expect = 0.050, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G + L++L +LS+ D +GY+L + IE LT G G +YP L L + I+ + Sbjct: 28 FRRGSVELMVLYLLSQKDCYGYQLTQLIEELTDGVICIPIGSLYPALYKLIDAGYISDDK 87 Query: 118 EEGGKKQIALTEQGAQWLEEN-REQVEMIEERIKARCVG 155 GK+ E+ +E+ RE+++++ E A + Sbjct: 88 RLVGKRM----ERVYYHIEDTGRERLKILLEDYSATTIA 122 >UniRef50_B8I8C9 Transcriptional regulator, PadR-like family n=12 Tax=Bacteria RepID=B8I8C9_CLOCE Length = 116 Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 4/85 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G ++IL +L ++D +GY++ + +E + +T G +YP L L+ +I EE Sbjct: 10 GSTTMLILKLLEKEDMYGYQMTRELELRSDNTFTLKEGTLYPILHSLESDGMIEAYWEET 69 Query: 121 G----KKQIALTEQGAQWLEENREQ 141 +K +T +G + LE+ +++ Sbjct: 70 DSARKRKYYRITVKGRKLLEDKQKE 94 >UniRef50_C7N786 Transcriptional regulator, PadR family n=6 Tax=Bacteria RepID=C7N786_SLAHD Length = 112 Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 76 SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQI--ALTEQGAQ 133 +HGY L+K I +T G G +Y LD LQ++ I +E +++ +T+ G Q Sbjct: 25 AHGYALMKEISQMTNGRVNLGAGSLYGALDALQKKGWIKALDEHPTDRKVEYIITDTGKQ 84 Query: 134 WLEENREQVE 143 + E+ +++E Sbjct: 85 FFEKELDRLE 94 >UniRef50_A2TYI9 Transcriptional regulator PadR-like family n=7 Tax=Bacteroidetes RepID=A2TYI9_9FLAO Length = 112 Score = 39.7 bits (91), Expect = 0.071, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 8/101 (7%) Query: 55 QRFFGHGELRLVILDIL-SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 Q+ + G L+ +IL +L S +GYE+ + ++ LT+G + G +YP L L+ L+ Sbjct: 4 QKLY-KGSLQTIILKLLASNTKMYGYEITQKVKELTKGELKITEGALYPALHKLEADGLL 62 Query: 114 TIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKA 151 + + G +K LTE G + E ++E +++ +K Sbjct: 63 DVEVAKVGNRLRKYYKLTENGTK---ETANKLEEMQDFLKT 100 >UniRef50_B1I0V4 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I0V4_DESAP Length = 138 Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 67 ILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG----GK 122 +L +L R +HGYELI+++ + P IY L ++E+ L+T R E G + Sbjct: 29 LLFLLYRKPAHGYELIQSLNRMDLPEGEADPATIYRNLRRMEEEELVTSRWEAGPSGPAR 88 Query: 123 KQIALTEQGAQWL 135 + LT G Q L Sbjct: 89 RLYHLTPAGKQAL 101 >UniRef50_A3PWG0 Transcriptional regulator, PadR family n=16 Tax=cellular organisms RepID=A3PWG0_MYCSJ Length = 128 Score = 39.3 bits (90), Expect = 0.081, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R F G +RL IL + D HG + E L Y SPG +YPTL L+ L+T Sbjct: 2 REFLRGAVRLHILHHAAEMDIHGAWMT---EELAHHGYQISPGTLYPTLHRLEADGLLTS 58 Query: 116 REE--EGGKKQIA-LTEQGAQWLEENREQV 142 R+ +G +++ T+ G + L E+R + Sbjct: 59 RQRVVDGRTRRVYRATKAGRKALAEDRAAL 88 >UniRef50_D2ART9 Transcriptional regulator protein-like protein n=5 Tax=Actinomycetales RepID=D2ART9_STRRD Length = 168 Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 11/88 (12%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGV--IYPTLDFLQEQSLITIREEE- 119 +R +L +L+++ +HGYEL +A+E + G+ PSP + IY TL L++ L+ + + E Sbjct: 1 MRQSLLALLAKEPAHGYELKQALEQIF-GSAYPSPNIGQIYVTLSRLEKDGLVRVVDVEQ 59 Query: 120 ---GGKKQIALTEQGAQ----WLEENRE 140 KK LT G + W+++ E Sbjct: 60 SNRPNKKVYYLTAAGREALDVWVDDPTE 87 >UniRef50_A7VVC7 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVC7_9CLOT Length = 105 Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 G +++ E IL L R + HGY ++ ++ +TQG G IY TL L+ Sbjct: 5 GLKKKLLPMSETMFYILSSL-RQERHGYGIMLHVKEITQGRIVLGAGTIYQTLQKLERDR 63 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQV 142 LI E KKQ +T G + L E ++ Sbjct: 64 LIRPTREIDRKKQYLITGLGEELLREEARRI 94 >UniRef50_A8VWB0 FAD dependent oxidoreductase n=3 Tax=Firmicutes RepID=A8VWB0_9BACI Length = 114 Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (47%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 E IL L D HGY + K +E+LT G T G IY TL + + ++T+ + Sbjct: 18 ETAFYILLSLMVADRHGYGISKHVESLTDGRITLGSGTIYGTLTKMLKDGIVTVYADGDR 77 Query: 122 KKQIALTEQGAQWLEENREQVEMIEE 147 KK +T G + + +++ + E Sbjct: 78 KKTYEITPLGKRIFYHEQSRLKEVYE 103 >UniRef50_C7MFQ8 Predicted transcriptional regulator n=16 Tax=Bacteria RepID=C7MFQ8_BRAFD Length = 111 Score = 39.3 bits (90), Expect = 0.092, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE-- 118 G + L++L IL S+ YE+ K I + +QG Y +Y + LQ Q L+ E+ Sbjct: 9 GHIDLILLSILESRPSYAYEISKTITDRSQGEYVIKQTTLYSAVKRLQSQGLLDSYEDVS 68 Query: 119 EGGKKQI--ALTEQGAQWLEENREQ 141 GK + LT +G L+ R++ Sbjct: 69 SSGKPRTYYTLTSEGLAQLDVKRDE 93 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P64588 Uncharacterized protein yqjI n=110 Tax=Enterobac... 274 2e-72 UniRef50_C1F449 Transcriptional regulator, PadR family n=1 Tax=A... 181 1e-44 UniRef50_B4ETU0 PadR-family transcriptional regulator n=6 Tax=En... 177 1e-43 UniRef50_C6XLJ9 Transcriptional regulator, PadR-like family n=1 ... 171 1e-41 UniRef50_C8QBP6 Transcriptional regulator, PadR-like family n=1 ... 169 5e-41 UniRef50_D0XSD8 Transcriptional regulator, PadR-like family n=1 ... 168 9e-41 UniRef50_D2LBL1 Transcriptional regulator, PadR-like family n=1 ... 167 2e-40 UniRef50_C6RKQ8 PadR-family transcriptional regulator n=3 Tax=Ac... 167 3e-40 UniRef50_B8GI45 Transcriptional regulator, PadR-like family n=2 ... 165 8e-40 UniRef50_C5CTL4 Transcriptional regulator, PadR-like family n=2 ... 162 6e-39 UniRef50_D1NZ20 Transcriptional regulator, PadR family n=1 Tax=P... 161 1e-38 UniRef50_Q2L0P7 PadR-family transcriptional regulator n=1 Tax=Bo... 160 4e-38 UniRef50_A4TIE6 Transcriptional regulator, PadR family n=33 Tax=... 155 7e-37 UniRef50_Q0FKV2 Transcriptional Regulator, PadR-like family prot... 155 9e-37 UniRef50_B2I0Y1 Predicted transcriptional regulator n=12 Tax=Aci... 155 1e-36 UniRef50_C5SJF5 Transcriptional regulator, PadR-like family n=1 ... 155 1e-36 UniRef50_C7JI60 Transcriptional regulator PadR n=10 Tax=Proteoba... 154 2e-36 UniRef50_C8Q5D9 Transcriptional regulator, PadR-like family n=1 ... 153 3e-36 UniRef50_B1M5I1 Transcriptional regulator, PadR-like family n=7 ... 153 5e-36 UniRef50_B2PUN1 Putative uncharacterized protein n=1 Tax=Provide... 152 5e-36 UniRef50_Q21BY2 Transcriptional regulator, PadR family n=5 Tax=A... 148 1e-34 UniRef50_D2PQ95 Transcriptional regulator, PadR-like family n=2 ... 148 1e-34 UniRef50_A6SZ38 Transcriptional regulator n=1 Tax=Janthinobacter... 148 1e-34 UniRef50_A9GIC6 Transcriptional regulator, PadR family n=1 Tax=S... 147 2e-34 UniRef50_A5EFD0 Transcriptional regulator, PadR family n=2 Tax=B... 144 1e-33 UniRef50_B6IW77 Transcriptional regulator, PadR family protein n... 144 2e-33 UniRef50_A8IL86 Transcriptional regulator n=8 Tax=Rhizobiales Re... 143 3e-33 UniRef50_Q2G591 Transcriptional regulator, PadR family n=2 Tax=S... 143 5e-33 UniRef50_D2M8Y5 Transcriptional regulator, PadR-like family n=1 ... 142 5e-33 UniRef50_A5FQF6 Transcriptional regulator, PadR family n=2 Tax=D... 142 7e-33 UniRef50_B2Q1E3 Putative uncharacterized protein n=3 Tax=Provide... 140 3e-32 UniRef50_Q1AYM9 Transcriptional regulator, PadR family n=1 Tax=R... 139 7e-32 UniRef50_Q2NCW1 Putative transcriptional regulator n=4 Tax=cellu... 138 1e-31 UniRef50_UPI0001C3245B transcriptional regulator, PadR-like fami... 137 2e-31 UniRef50_D1AC56 Transcriptional regulator, PadR-like family n=1 ... 136 4e-31 UniRef50_B9J7W6 Transcriptional regulator protein n=9 Tax=Rhizob... 134 2e-30 UniRef50_B4W6A1 Transcriptional regulator, PadR family protein n... 132 9e-30 UniRef50_D2B5F1 Transcriptional regulator protein-like protein n... 131 1e-29 UniRef50_A3IWR1 Putative uncharacterized protein n=1 Tax=Cyanoth... 130 2e-29 UniRef50_C3JSU7 Transcriptional regulator, PadR family n=1 Tax=R... 130 3e-29 UniRef50_C5QNA0 PadR family transcriptional regulator n=4 Tax=St... 128 8e-29 UniRef50_C8SSA8 Transcriptional regulator, PadR-like family n=2 ... 128 1e-28 UniRef50_C8XGD0 Transcriptional regulator, PadR-like family n=1 ... 128 2e-28 UniRef50_B0RN88 Transcriptional regulator, PadR-like family n=5 ... 127 2e-28 UniRef50_Q4J6E8 Transcriptional regulator PadR-like family n=2 T... 126 4e-28 UniRef50_B2IYD3 Transcriptional regulator, PadR-like family n=4 ... 126 5e-28 UniRef50_A0Q9V4 Transcriptional regulator, PadR family protein n... 126 5e-28 UniRef50_Q0S0L1 Possible transcriptional regulator n=3 Tax=Nocar... 125 7e-28 UniRef50_UPI000050FEE8 transcriptional regulator n=1 Tax=Breviba... 125 1e-27 UniRef50_D1VPN8 Transcriptional regulator, PadR-like family n=1 ... 123 4e-27 UniRef50_B8HG13 Transcriptional regulator, PadR-like family n=4 ... 123 5e-27 UniRef50_B4DB33 Transcriptional regulator, PadR-like family n=1 ... 122 7e-27 UniRef50_A1R8I7 Putative transcriptional regulator, PadR family ... 121 1e-26 UniRef50_C2AQN6 Predicted transcriptional regulator n=1 Tax=Tsuk... 121 2e-26 UniRef50_B8H9F8 Transcriptional regulator, PadR-like family n=3 ... 120 3e-26 UniRef50_C3MJS4 Transcriptional regulator PadR family protein n=... 120 4e-26 UniRef50_C6NX27 Transcriptional regulator, PadR-like family n=1 ... 120 4e-26 UniRef50_C6WET7 Transcriptional regulator, PadR-like family n=11... 119 5e-26 UniRef50_Q4ZPG6 Transcriptional regulator PadR-like n=13 Tax=Pse... 119 6e-26 UniRef50_Q8NLG3 Predicted transcriptional regulators n=4 Tax=Cor... 119 8e-26 UniRef50_D1BI54 Predicted transcriptional regulator n=1 Tax=Sang... 118 2e-25 UniRef50_UPI000038E215 transcriptional regulator n=1 Tax=Ferropl... 117 2e-25 UniRef50_B2TFG8 Transcriptional regulator, PadR-like family n=67... 117 2e-25 UniRef50_C1RLJ9 Transcriptional regulator, PadR family n=1 Tax=C... 117 2e-25 UniRef50_A8M728 Transcriptional regulator, PadR-like family n=1 ... 116 5e-25 UniRef50_C5C5Y5 Transcriptional regulator, PadR-like family n=1 ... 116 5e-25 UniRef50_B4SHM6 Transcriptional regulator, PadR-like family n=3 ... 115 7e-25 UniRef50_Q3SN82 Transcriptional regulator, PadR family n=3 Tax=N... 115 1e-24 UniRef50_A9WKS9 Transcriptional regulator PadR-like family n=1 T... 114 2e-24 UniRef50_A4G020 Transcriptional regulator, PadR family n=4 Tax=M... 114 2e-24 UniRef50_A4YE88 Transcriptional regulator, PadR family n=1 Tax=M... 114 2e-24 UniRef50_D1YXU7 PadR-like family transcriptional regulator n=2 T... 113 3e-24 UniRef50_A1SQM2 Transcriptional regulator, PadR family n=1 Tax=N... 113 3e-24 UniRef50_C7QEY5 Transcriptional regulator, PadR-like family n=1 ... 113 4e-24 UniRef50_Q137X5 Transcriptional regulator, PadR family n=2 Tax=R... 113 5e-24 UniRef50_C7LZY3 Transcriptional regulator, PadR-like family n=1 ... 112 6e-24 UniRef50_Q4C4V0 Transcriptional regulator PadR-like n=1 Tax=Croc... 112 7e-24 UniRef50_C7P8R4 Transcriptional regulator, PadR-like family n=1 ... 112 1e-23 UniRef50_B5GFD7 Putative uncharacterized protein n=4 Tax=Strepto... 110 3e-23 UniRef50_B9KC28 Transcriptional regulator, PadR family n=1 Tax=T... 110 4e-23 UniRef50_A5IKC3 Transcriptional regulator, PadR family n=5 Tax=T... 109 5e-23 UniRef50_D1A5M7 Transcriptional regulator, PadR-like family n=1 ... 109 7e-23 UniRef50_B2IKL6 Transcriptional regulator, PadR-like family n=2 ... 109 7e-23 UniRef50_B5IFX4 Transcriptional regulator, PadR family protein n... 109 7e-23 UniRef50_B0R6W2 Putative uncharacterized protein n=2 Tax=Halobac... 108 1e-22 UniRef50_Q2FNW6 Transcriptional regulator, PadR family n=1 Tax=M... 107 3e-22 UniRef50_Q977Z7 Putative uncharacterized protein TVG1573729 n=2 ... 106 5e-22 UniRef50_A7HN08 Transcriptional regulator, PadR-like family n=1 ... 105 7e-22 UniRef50_D2PES9 Transcriptional regulator PadR family protein n=... 105 9e-22 UniRef50_Q47SG6 Transcriptional regulator, PadR family n=1 Tax=T... 105 1e-21 UniRef50_A8LAZ7 Transcriptional regulator, PadR-like family n=9 ... 105 1e-21 UniRef50_B2UHK8 Transcriptional regulator, PadR-like family n=5 ... 104 2e-21 UniRef50_A8MBR3 Transcriptional regulator, PadR-like family n=1 ... 102 7e-21 UniRef50_C7QBA1 Transcriptional regulator, PadR-like family n=1 ... 102 7e-21 UniRef50_Q465T5 Transcriptional regulator, PadR family n=1 Tax=M... 102 9e-21 UniRef50_A6W6T2 Transcriptional regulator, PadR-like family n=1 ... 102 1e-20 UniRef50_Q97A48 Putative uncharacterized protein TVG0986825 n=1 ... 101 1e-20 UniRef50_C1YU51 Predicted transcriptional regulator n=1 Tax=Noca... 101 2e-20 UniRef50_D1ACF2 Transcriptional regulator, PadR-like family n=1 ... 100 3e-20 UniRef50_B1L3Y8 Transcriptional regulator, PadR-like family n=1 ... 100 3e-20 UniRef50_D1SPJ9 Transcriptional regulator, PadR-like family n=1 ... 100 3e-20 UniRef50_A9A325 Transcriptional regulator, PadR-like family n=1 ... 99 7e-20 UniRef50_Q2FP38 Transcriptional regulator, PadR family n=1 Tax=M... 99 8e-20 UniRef50_A0RKG2 Transcriptional regulator, PadR family n=50 Tax=... 99 8e-20 UniRef50_A4WJU8 Transcriptional regulator, PadR family n=4 Tax=T... 98 2e-19 UniRef50_A0RYA5 Transcriptional regulator n=3 Tax=Thaumarchaeota... 98 2e-19 UniRef50_D0LFT7 Transcriptional regulator, PadR-like family n=1 ... 98 2e-19 UniRef50_A4YF39 Transcriptional regulator, PadR family n=2 Tax=S... 97 3e-19 UniRef50_Q6KZ78 Transcriptional regulator n=1 Tax=Picrophilus to... 97 3e-19 UniRef50_D1X4A7 Transcriptional regulator, PadR-like family n=8 ... 97 4e-19 UniRef50_D2AYZ8 Transcriptional regulator protein-like protein n... 97 5e-19 UniRef50_A4WHQ6 Transcriptional regulator, PadR family n=5 Tax=T... 96 5e-19 UniRef50_B9LRB4 Transcriptional regulator, PadR-like family n=4 ... 96 6e-19 UniRef50_Q9YC94 Putative transcriptional regulator, PadR family ... 96 6e-19 UniRef50_Q7NV79 Putative uncharacterized protein n=1 Tax=Chromob... 96 7e-19 UniRef50_C4RQF7 PadR-family transcriptional regulator n=2 Tax=Mi... 95 2e-18 UniRef50_C5AKR8 Putative uncharacterized protein n=1 Tax=Burkhol... 94 2e-18 UniRef50_A9WPK9 Transcriptional regulator, PadR family protein n... 94 3e-18 UniRef50_Q2RGC9 Transcriptional regulator, PadR family n=3 Tax=B... 93 5e-18 UniRef50_D1XDB7 Transcriptional regulator, PadR-like family n=8 ... 93 6e-18 UniRef50_A1RWE5 Transcriptional regulator, PadR family n=1 Tax=T... 92 8e-18 UniRef50_A1S018 Transcriptional regulator, PadR family n=1 Tax=T... 92 1e-17 UniRef50_B2A0I7 Transcriptional regulator, PadR-like family n=1 ... 92 1e-17 UniRef50_A6URE9 Transcriptional regulator, PadR-like family n=1 ... 91 2e-17 UniRef50_Q9RT15 Putative uncharacterized protein n=1 Tax=Deinoco... 89 7e-17 UniRef50_C5A2S9 Transcription regulator, PadR-like family n=4 Ta... 87 5e-16 UniRef50_B9XHE1 Transcriptional regulator, PadR-like family n=2 ... 85 2e-15 UniRef50_A4YGH7 Transcriptional regulator, PadR family n=1 Tax=M... 83 7e-15 UniRef50_A7I725 Transcriptional regulator, PadR-like family n=1 ... 82 8e-15 UniRef50_B8D3Z1 Transcriptional regulator, PadR-like family n=1 ... 78 1e-13 UniRef50_B0NZB0 Putative uncharacterized protein n=3 Tax=Firmicu... 78 2e-13 UniRef50_D1YY91 Putative PadR-like family transcriptional regula... 77 3e-13 UniRef50_Q2BFH1 Putative uncharacterized protein n=1 Tax=Bacillu... 77 4e-13 UniRef50_Q9RTB9 Putative uncharacterized protein n=2 Tax=Deinoco... 75 1e-12 Sequences not found previously or not previously below threshold: UniRef50_Q47QT2 Transcriptional regulator, PadR family n=2 Tax=A... 112 1e-23 UniRef50_D2EEC8 Transcriptional regulator, PadR family n=1 Tax=C... 100 4e-20 UniRef50_Q0W129 Predicted transcription regulator (PadR-like fam... 95 1e-18 UniRef50_C8VZL9 Transcriptional regulator, PadR-like family n=2 ... 92 9e-18 UniRef50_A7IME8 Transcriptional regulator, PadR-like family n=2 ... 92 1e-17 UniRef50_D1YZ73 PadR-like family transcriptional regulator n=2 T... 90 3e-17 UniRef50_C3N9F3 Transcriptional regulator, PadR-like family n=11... 90 5e-17 UniRef50_A6BF93 Putative uncharacterized protein n=1 Tax=Dorea l... 88 2e-16 UniRef50_UPI0001C35727 PadR-like family transcriptional regulato... 87 3e-16 UniRef50_C0H3S6 Putative DNA-binding protein ywzG n=5 Tax=Bacill... 87 5e-16 UniRef50_A8LCR1 Transcriptional regulator, PadR-like family n=12... 85 1e-15 UniRef50_D1A757 Transcriptional regulator, PadR-like family n=2 ... 85 1e-15 UniRef50_C6A0Y4 Transcription regulator, PadR-like family n=7 Ta... 84 2e-15 UniRef50_A6TRI8 Transcriptional regulator, PadR-like family n=1 ... 84 3e-15 UniRef50_C7DGB3 Transcriptional regulator, PadR-like family n=2 ... 83 4e-15 UniRef50_C5CG93 Transcriptional regulator, PadR-like family n=1 ... 83 5e-15 UniRef50_C8WGP1 Transcriptional regulator, PadR-like family n=1 ... 83 5e-15 UniRef50_Q9RVI7 Pex-related protein n=1 Tax=Deinococcus radiodur... 83 8e-15 UniRef50_A3DGN6 Transcriptional regulator, PadR family n=4 Tax=C... 82 8e-15 UniRef50_B8I8C9 Transcriptional regulator, PadR-like family n=12... 82 9e-15 UniRef50_C7QKF8 Transcriptional regulator, PadR-like family n=4 ... 82 1e-14 UniRef50_UPI0001B57518 PadR family transcriptional regulator n=1... 82 1e-14 UniRef50_A7KUY2 Predicted transcription regulator n=1 Tax=Bacill... 82 1e-14 UniRef50_A6LMA8 Transcriptional regulator, PadR-like family n=1 ... 81 2e-14 UniRef50_Q2RG05 Transcriptional regulator, PadR family n=2 Tax=C... 80 3e-14 UniRef50_A6C2L2 Transcriptional regulator, PadR-like family prot... 80 4e-14 UniRef50_A6DRV1 Putative uncharacterized protein n=1 Tax=Lentisp... 80 5e-14 UniRef50_C6VSB4 Transcriptional regulator, PadR-like family n=1 ... 80 5e-14 UniRef50_Q9RSP5 Putative uncharacterized protein n=1 Tax=Deinoco... 80 6e-14 UniRef50_A8L6H3 Transcriptional regulator, PadR-like family n=5 ... 80 6e-14 UniRef50_A8TFR8 Transcriptional regulator, PadR-like family n=1 ... 80 6e-14 UniRef50_A9AWY2 Transcriptional regulator, PadR-like family n=1 ... 80 7e-14 UniRef50_B8FYD5 Transcriptional regulator, PadR-like family n=22... 79 7e-14 UniRef50_D2QHL5 Transcriptional regulator, PadR-like family n=1 ... 79 7e-14 UniRef50_D1PN95 Transcriptional regulator, PadR family protein n... 79 9e-14 UniRef50_C8Q356 Transcriptional regulator, PadR-like family n=1 ... 79 1e-13 UniRef50_A2TYI9 Transcriptional regulator PadR-like family n=7 T... 79 1e-13 UniRef50_C0ZGN3 Putative transcriptional regulator n=3 Tax=Firmi... 79 1e-13 UniRef50_A8SUL2 Putative uncharacterized protein n=1 Tax=Coproco... 79 1e-13 UniRef50_D2ART9 Transcriptional regulator protein-like protein n... 78 1e-13 UniRef50_Q1AUC4 Transcriptional regulator, PadR family n=1 Tax=R... 78 1e-13 UniRef50_A2BMT4 Predicted transcriptional regulator n=1 Tax=Hype... 78 1e-13 UniRef50_B8FGB8 Transcriptional regulator, PadR-like family n=1 ... 78 2e-13 UniRef50_C0H3Y4 Putative DNA-binding protein yizB n=1 Tax=Bacill... 78 2e-13 UniRef50_D2QES7 Transcriptional regulator, PadR-like family n=1 ... 78 2e-13 UniRef50_A8AAT8 Transcriptional regulator, PadR family n=1 Tax=I... 77 3e-13 UniRef50_C5CF63 Transcriptional regulator, PadR-like family n=1 ... 77 3e-13 UniRef50_C5CHI3 Transcriptional regulator, PadR-like family n=1 ... 77 3e-13 UniRef50_Q1IS64 Transcriptional regulator, PadR family n=2 Tax=A... 77 3e-13 UniRef50_B0MSB8 Putative uncharacterized protein n=1 Tax=Eubacte... 77 3e-13 UniRef50_Q5WGK7 Putative uncharacterized protein n=1 Tax=Bacillu... 77 4e-13 UniRef50_C9D3S1 Transcriptional regulator n=1 Tax=Silicibacter s... 77 4e-13 UniRef50_Q7NDS5 Glr4157 protein n=1 Tax=Gloeobacter violaceus Re... 77 5e-13 UniRef50_B5IBP0 Transcriptional regulator, PadR family, putative... 77 5e-13 UniRef50_D1PPF6 Transcriptional regulator, PadR family n=1 Tax=S... 76 6e-13 UniRef50_B7K746 Transcriptional regulator, PadR-like family n=3 ... 76 6e-13 UniRef50_A6BZG9 Putative uncharacterized protein n=1 Tax=Plancto... 76 6e-13 UniRef50_Q0W4V9 Putative transcription regulator (PadR-like fami... 76 6e-13 UniRef50_B3XP74 Transcriptional regulator, PadR-like family n=3 ... 76 9e-13 UniRef50_B8I032 Transcriptional regulator, PadR-like family n=19... 75 1e-12 UniRef50_C4RM26 PadR family transcriptional regulator n=1 Tax=Mi... 75 1e-12 UniRef50_A1S0L0 Transcriptional regulator, PadR family n=1 Tax=T... 75 1e-12 UniRef50_A8M7C7 Transcriptional regulator, PadR-like family n=2 ... 75 1e-12 UniRef50_Q1IMK2 Transcriptional regulator, PadR family n=9 Tax=A... 75 1e-12 UniRef50_B4D7I1 Transcriptional regulator, PadR-like family n=2 ... 75 2e-12 UniRef50_Q639U6 Transcriptional regulator, PadR family n=74 Tax=... 75 2e-12 UniRef50_C6LLA8 Transcriptional regulator, PadR family n=5 Tax=F... 74 2e-12 UniRef50_Q0TT89 Transcriptional regulator, PadR family n=9 Tax=C... 74 2e-12 UniRef50_C4F9Z1 Putative uncharacterized protein n=1 Tax=Collins... 74 2e-12 UniRef50_C7MG61 Predicted transcriptional regulator n=1 Tax=Brac... 74 3e-12 UniRef50_D1BAH9 Transcriptional regulator, PadR family n=1 Tax=S... 74 3e-12 UniRef50_D0L8B8 Transcriptional regulator PadR family protein n=... 74 3e-12 UniRef50_A7VYN2 Putative uncharacterized protein n=1 Tax=Clostri... 73 4e-12 UniRef50_UPI000196AD90 hypothetical protein CATMIT_00291 n=1 Tax... 73 4e-12 UniRef50_UPI0001788FC3 transcriptional regulator, PadR-like fami... 73 4e-12 UniRef50_B9Y2R1 Putative uncharacterized protein n=1 Tax=Holdema... 73 4e-12 UniRef50_C2BYK8 PadR family transcriptional regulator n=3 Tax=Ba... 73 4e-12 UniRef50_O27532 Putative uncharacterized protein n=1 Tax=Methano... 73 5e-12 UniRef50_Q17ZV3 PadR-family transcriptional regulator n=7 Tax=Cl... 73 5e-12 UniRef50_A0NMS3 Putative uncharacterized protein n=1 Tax=Labrenz... 73 5e-12 UniRef50_D2B3D4 Transcriptional regulator, PadR-like family n=1 ... 73 5e-12 UniRef50_Q9HJU5 Putative uncharacterized protein Ta0868 n=2 Tax=... 73 5e-12 UniRef50_C9AC80 PadR family transcriptional regulator n=4 Tax=En... 73 6e-12 UniRef50_C4DV24 Predicted transcriptional regulator n=2 Tax=Acti... 73 6e-12 UniRef50_Q2J4B8 Transcriptional regulator, PadR family n=59 Tax=... 73 6e-12 UniRef50_D1BEF8 Predicted transcriptional regulator n=1 Tax=Sang... 73 6e-12 UniRef50_B5VZF2 Transcriptional regulator, PadR-like family n=1 ... 73 6e-12 UniRef50_A5IWB9 Transcriptional regulator, PadR family n=35 Tax=... 73 6e-12 UniRef50_Q9RD92 Putative uncharacterized protein SCO2859 n=1 Tax... 73 7e-12 UniRef50_Q022R8 Transcriptional regulator, PadR family n=2 Tax=C... 73 7e-12 UniRef50_B2TNP2 Lineage-specific thermal regulator protein n=1 T... 73 7e-12 UniRef50_Q9V0W9 Putative uncharacterized protein n=2 Tax=Pyrococ... 73 8e-12 UniRef50_C5A240 Transcription regulator, PadR-like family n=7 Ta... 73 8e-12 UniRef50_A6CPP9 Putative uncharacterized protein n=1 Tax=Bacillu... 73 8e-12 UniRef50_C3RLL4 Transcriptional regulator n=2 Tax=Bacteria RepID... 72 8e-12 UniRef50_Q5WJB0 PadR family transcriptional regulator n=1 Tax=Ba... 72 9e-12 UniRef50_C1A3M6 PadR family transcriptional regulator n=1 Tax=Ge... 72 1e-11 UniRef50_A7VRI9 Putative uncharacterized protein n=1 Tax=Clostri... 72 1e-11 UniRef50_P94443 Negative transcription regulator padR n=5 Tax=Ba... 72 1e-11 UniRef50_C7IM16 Transcriptional regulator, PadR-like family n=1 ... 72 1e-11 UniRef50_Q2B5E4 Putative uncharacterized protein n=1 Tax=Bacillu... 72 1e-11 UniRef50_Q635P9 Transcriptional regulator, PadR family n=92 Tax=... 72 1e-11 UniRef50_A3DMJ9 Transcriptional regulator, PadR family n=1 Tax=S... 72 1e-11 UniRef50_UPI000196A9C2 hypothetical protein CATMIT_00222 n=1 Tax... 72 1e-11 UniRef50_B0TAS3 Transcriptional regulator, padr family, putative... 72 2e-11 UniRef50_A7G0W2 Transcriptional regulator, PadR family n=9 Tax=F... 72 2e-11 UniRef50_D1BL27 Transcriptional regulator, PadR-like family n=5 ... 72 2e-11 UniRef50_C7REA3 Transcriptional regulator, PadR-like family n=5 ... 72 2e-11 UniRef50_B5YBF9 Transcriptional regulator, PadR family, putative... 71 2e-11 UniRef50_C1QEA4 Transcriptional regulator, PadR family n=1 Tax=B... 71 2e-11 UniRef50_P20187 Uncharacterized 37.1 kDa protein in transposon T... 71 2e-11 UniRef50_D1Y9J2 Transcriptional regulator, PadR family n=2 Tax=P... 71 2e-11 UniRef50_B5I6L9 Putative uncharacterized protein n=1 Tax=Strepto... 71 3e-11 UniRef50_C7PGF5 Transcriptional regulator, PadR-like family n=1 ... 71 3e-11 UniRef50_Q1IKN6 Transcriptional regulator, PadR family n=1 Tax=C... 71 3e-11 UniRef50_C0ZHM5 Putative transcriptional regulator n=1 Tax=Brevi... 71 3e-11 >UniRef50_P64588 Uncharacterized protein yqjI n=110 Tax=Enterobacteriaceae RepID=YQJI_ECOLI Length = 207 Score = 274 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH 60 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH Sbjct: 1 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH 60 Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG Sbjct: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN Sbjct: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQLD 207 QSDISDAQIKKIIAVIDRAAFDITQLD Sbjct: 181 QSDISDAQIKKIIAVIDRAAFDITQLD 207 >UniRef50_C1F449 Transcriptional regulator, PadR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F449_ACIC5 Length = 191 Score = 181 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 82/205 (40%), Positives = 110/205 (53%), Gaps = 20/205 (9%) Query: 3 HHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRG-GGRRQRFFGHG 61 H HE H G+ RH G H G G G RG GG R+R F +G Sbjct: 6 HDHE---DHPGRERHRG---------RHGGFGEYF-------GNFERGFGGGRERMFDNG 46 Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ELRLVIL IL++ S+GYE+IK IE G Y+PSPGV+YPTL L+E+ + EG Sbjct: 47 ELRLVILQILAKKPSYGYEIIKEIEEQLAGAYSPSPGVVYPTLTMLEEEGYAVVASTEGN 106 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK+ A TEQG +L++N+ +E I R++ + PQ+ RA+ N K L +R Sbjct: 107 KKRYAATEQGLAYLKQNQGILEGIGHRMEKMGKAYGRERAPQIMRAIMNLKFALKVRARS 166 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 +S QI+KI ID AA I ++ Sbjct: 167 GKLSPEQIRKIAEAIDAAARVIDEV 191 >UniRef50_B4ETU0 PadR-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=B4ETU0_PROMH Length = 271 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 32/233 (13%) Query: 3 HHHEG----CCKHEGQPRHEG---CCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQ 55 HH G CC E EG CC+ + HEH H CC G + G+R Sbjct: 32 QHHNGNNEHCCHGERGHHQEGHGKCCQQGEQSHEHNDHAEH----GCCHGEKQQEHGKRH 87 Query: 56 -------------------RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPS 96 R F HG+LR+++L +++ SHGYE+I+ I+ + G Y PS Sbjct: 88 GRGCGAGKGKGRGQGRQLKRMFDHGDLRVLLLSMIAAKPSHGYEIIRGIDEASSGLYVPS 147 Query: 97 PGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 PGVIYPTL L+EQ L+ E G+K ++T +G+ +L EN+E + I+ ++ + Sbjct: 148 PGVIYPTLTLLEEQDLVVANIAEKGRKNYSITPEGSAFLAENQETEKNIQNKLAYARDLS 207 Query: 157 ALRQNP--QMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 +++ A+ KAVL ++ +S + ++I +++ A I ++ Sbjct: 208 QNAGGVSEEIEFAVGKLKAVLRHKLVLKQLSVEKAQRIAFILNEAVEKIEAIN 260 >UniRef50_C6XLJ9 Transcriptional regulator, PadR-like family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ9_HIRBI Length = 199 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 2/186 (1%) Query: 23 GEKSEHEHCGHGHQHEHGQCCGGRHG--RGGGRRQRFFGHGELRLVILDILSRDDSHGYE 80 + EH H H H+ G RH R G R+R F ELRLV+L +S + HGY+ Sbjct: 14 QDHKEHGHKHHRHRSVRRHKNGHRHASMRRNGGRRRVFDAAELRLVLLHFISTNPKHGYD 73 Query: 81 LIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENRE 140 LI+AIE + G+Y PSPGV+YP L L++ I+ ++EEGGKK ++T G L+ E Sbjct: 74 LIRAIEEHSGGSYAPSPGVVYPALSMLEDIGFISAQQEEGGKKAFSITPDGESELQTQSE 133 Query: 141 QVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAA 200 + +R+++ +KRA++N K L R+ QSD +DA I A+ID A Sbjct: 134 TTSSLLQRLESLASEHGRLNPAPVKRAMENIKTALRNRMTQSDATDATALDIAAIIDEAT 193 Query: 201 FDITQL 206 I +L Sbjct: 194 HKIERL 199 >UniRef50_C8QBP6 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8QBP6_9ENTR Length = 179 Score = 169 bits (428), Expect = 5e-41, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 4/181 (2%) Query: 25 KSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKA 84 K + HG + C G R R R+R ++RL++L L++ D+HGYELIK+ Sbjct: 2 KQHRDSPWHGDHAQRAFCAGARKKR----RERMLDASDIRLLMLHFLAQSDAHGYELIKS 57 Query: 85 IENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEM 144 +E L++G Y+PSPG+IYP L L+E I + + + +K L + G L ENRE V+ Sbjct: 58 VEELSKGEYSPSPGIIYPNLTLLEETDAIRVVDAQESRKAYTLNDSGRALLAENRENVDT 117 Query: 145 IEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 I R+ + + R P +++A+ N K L+ R+ Q +IS+ + +IA ++ AA I Sbjct: 118 IIGRLTSLAILVNNRSIPAVEQAIHNIKFTLNHRLAQENISEEALDIVIAALNEAAEKIA 177 Query: 205 Q 205 + Sbjct: 178 K 178 >UniRef50_D0XSD8 Transcriptional regulator, PadR-like family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XSD8_9CAUL Length = 213 Score = 168 bits (426), Expect = 9e-41, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FG G+LRLV+L ++ ++ HGY+LIKAIE G Y PSPGV+YPTL L ++ LI Sbjct: 65 MFGPGDLRLVLLALIEQEPRHGYDLIKAIETAFGGGYAPSPGVVYPTLSLLADEGLIAGV 124 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKR-ALDNFKAVL 175 E+ GK+ LT G WL+ENR V+ + +R+ + Q P++ R A + + Sbjct: 125 EDTSGKRIFTLTPAGQTWLDENRTAVDGVMQRMALAARLVSGEQTPEVVREAFHTLRHAV 184 Query: 176 DLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 ++ + S+A+ +++ + RA DI++ Sbjct: 185 QMK--PGNWSEAETARVVEALMRAVRDISE 212 >UniRef50_D2LBL1 Transcriptional regulator, PadR-like family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBL1_RHOVA Length = 177 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%) Query: 33 HGHQHEHGQCCGG---RHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLT 89 GH G G G GR R G+LR ++LD++ HGYE+IKAIE+ Sbjct: 2 FGHHDRRGGSRHGGDHPFGGRRGRHGRPLEQGDLRWLVLDLIGEQPRHGYEIIKAIEDAF 61 Query: 90 QGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 G YTPSPGVIYPTL L+E LI + E +G KK +LT+QG L ++V + R+ Sbjct: 62 NGAYTPSPGVIYPTLTLLEETGLI-VGETQGAKKLYSLTDQGRAELAARVQEVTAVRGRL 120 Query: 150 KARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + P+M RA+DN +A + +R+++ +S ++ I +DRAA +I + Sbjct: 121 EEARARFGANPAPEMIRAMDNLRAAVQVRLSKGPLSPEAVQVITGALDRAASEIER 176 >UniRef50_C6RKQ8 PadR-family transcriptional regulator n=3 Tax=Acinetobacter RepID=C6RKQ8_ACIRA Length = 176 Score = 167 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 88/154 (57%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ R F G ++L++L ++ + +GYE+IK+I L G Y+PS G IYPTL +L++ Sbjct: 17 RKSRLFESGHMKLLVLSLIEQAPRYGYEIIKSIGELVGGGYSPSTGTIYPTLSYLEDMQF 76 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 ++I + +G +KQ +T G L RE +E I R++ R Q + RA+ N K Sbjct: 77 VSIEKPDGDRKQYKITVTGINHLNGQREHLEHILGRLETRREIQNNDQYLDIYRAMANLK 136 Query: 173 AVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 L L++ + +++ I +I ID+AA DI+ L Sbjct: 137 TSLRLKLKNNALTEETIHQIAKSIDQAAVDISCL 170 >UniRef50_B8GI45 Transcriptional regulator, PadR-like family n=2 Tax=Methanosphaerula palustris E1-9c RepID=B8GI45_METPE Length = 238 Score = 165 bits (418), Expect = 8e-40, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 7/206 (3%) Query: 6 EGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQR-----FFGH 60 +G C E C+G + E G + HG G G F Sbjct: 35 QGFCDREYGSIGNRGCRGF-GDRELGGFNGRDPHGFGGHGGRDPRGFGGFGGGRGRLFDA 93 Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G+++L IL++LS S+GY++IK +E G Y PSPGVIYPTL L+E+ L T+ EG Sbjct: 94 GDIKLAILNLLSEQPSYGYQIIKTMEQRLAGGYAPSPGVIYPTLTMLEEEGLATVSL-EG 152 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 KK ++T +G Q+L+ + E+V+ + ER++ G ++P++ +A N + R+ Sbjct: 153 SKKVYSVTPEGMQYLQTHEERVKELFERLEEAGRGFQHGRSPELMKAFKNLHGAVMARLL 212 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 + + + QI I ++ AA I L Sbjct: 213 RGNATPEQISTIAETMNAAARTIDDL 238 >UniRef50_C5CTL4 Transcriptional regulator, PadR-like family n=2 Tax=Comamonadaceae RepID=C5CTL4_VARPS Length = 203 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 91/147 (61%), Gaps = 3/147 (2%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR-EEEGG 121 LR V+L +++ +HGYELIKAIE+ G+Y PSPGV+YPTL L+E +++ + GG Sbjct: 57 LRFVLLQLIADKPAHGYELIKAIEDRLGGSYAPSPGVVYPTLTLLEEMGYLSVEMADTGG 116 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--QNPQMKRALDNFKAVLDLRV 179 +K+ ++T G ++L NR+ + + R+ GA R + PQ+ RA++N K + +R+ Sbjct: 117 RKRYSITASGREFLAANRDTADAMMARMSGGVDGAGPRGGRPPQVTRAIENLKLAMRMRL 176 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 + + +++ Q AV+D AA + ++ Sbjct: 177 SGTPLTEQQAHDFAAVLDSAAQQLERI 203 >UniRef50_D1NZ20 Transcriptional regulator, PadR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NZ20_9ENTR Length = 214 Score = 161 bits (408), Expect = 1e-38, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 91/159 (57%), Gaps = 2/159 (1%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G +R F +LR+ IL +L ++GYELIK I T G Y PSPGVIYPTL L+E Sbjct: 47 GKSVRRMFNPKQLRIYILHLLVDRANYGYELIKKISESTAGLYCPSPGVIYPTLTLLEEL 106 Query: 111 SLITIREEEG-GKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRAL 168 I+I EE G+K +T +G +L E + ++ ++K A+ + A + +++ A+ Sbjct: 107 GFISIGEETAKGRKCYEITPEGRCFLLLKVEILNEVKAKLKYAQELRAGNQFANEIESAV 166 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 D FK++L ++ +S + K++ +I++A I Q++ Sbjct: 167 DKFKSLLRHKIVLQQLSKGEAAKVVEIINQAVNRIEQVN 205 >UniRef50_Q2L0P7 PadR-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2L0P7_BORA1 Length = 167 Score = 160 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 69/170 (40%), Positives = 103/170 (60%), Gaps = 6/170 (3%) Query: 37 HEHGQCCGGRHGR-GGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTP 95 H H G + GG RR+R F G +RL+ L IL+ HGYE+I+AI L G+Y+P Sbjct: 2 HSHHVRGGDPFEQEGGRRRERVFPPGAIRLLALSILASQPCHGYEVIRAIGALVGGDYSP 61 Query: 96 SPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 SPG IYPTL L++ L T + G+KQ +T G Q L+ + E +E R++ R Sbjct: 62 SPGTIYPTLALLEDMGLATASVLDDGRKQYRITPAGQQHLDAHAEDLE----RVRRRLAQ 117 Query: 156 AALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + PQ++RA++NF+A L LR+ ++D A ++++IA+IDRAA DI + Sbjct: 118 ERPARPPQLQRAIENFRAALRLRL-EADRDAATLERVIAIIDRAAVDIGR 166 >UniRef50_A4TIE6 Transcriptional regulator, PadR family n=33 Tax=Enterobacteriaceae RepID=A4TIE6_YERPP Length = 226 Score = 155 bits (393), Expect = 7e-37, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 1/191 (0%) Query: 15 PRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRD 74 C + + H E + GRGG R F HG+LR+V+L +L++ Sbjct: 17 EGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKM-HRLFEHGDLRVVLLALLNKT 75 Query: 75 DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQW 134 SHGYELIKAIE + G Y PSPGVIYPTL L+EQ +T G+K +T+ G Sbjct: 76 PSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFE 135 Query: 135 LEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIA 194 L++N+ V++I R+ + A+ + +L + ++D++ Q+ +I Sbjct: 136 LQKNQAMVDVIFARLAQVNRHKEGNLAEGIADAMHRLRHILRSNMMRADLTPEQVARINT 195 Query: 195 VIDRAAFDITQ 205 + A I + Sbjct: 196 ALLAAVDTIEE 206 >UniRef50_Q0FKV2 Transcriptional Regulator, PadR-like family protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKV2_9RHOB Length = 180 Score = 155 bits (392), Expect = 9e-37, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 3/171 (1%) Query: 34 GHQHEHGQCCGGRH-GRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGN 92 G H + RH G +R F +GELRL+IL ++++ HGYE+IKAIE G Sbjct: 7 GPARPHAKPSSERHKGPAKRGPRRLFEYGELRLLILAMIAQSPRHGYEIIKAIEERFNGG 66 Query: 93 YTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 Y PSPGVIYP+L +L+E I + +E +K +T +GA ++E NR + + R Sbjct: 67 YCPSPGVIYPSLSWLEEMGYIAVEPDENARKLSRITAEGAAFIEANRTAADELLTRTIPP 126 Query: 153 CVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 A + ++ A+D+ K L R+ + I+ + + + A +I Sbjct: 127 NHRANAPE--EIVAAMDDIKLALRQRLAACGNDASVIEALTETLRKTAQEI 175 >UniRef50_B2I0Y1 Predicted transcriptional regulator n=12 Tax=Acinetobacter RepID=B2I0Y1_ACIBC Length = 183 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 54/150 (36%), Positives = 91/150 (60%), Gaps = 2/150 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G ++L++L ++ + HGYE+IK I +L YTPS G IYPTL L+E +LI + Sbjct: 36 LFEAGRMKLLVLHLIQQSPKHGYEIIKEISDLVGDGYTPSAGTIYPTLTSLEEMNLINLL 95 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 + E +KQ +TE G +L E+++++ + E+++ R + Q ++ RA++N K L Sbjct: 96 DVE--RKQYQITEFGEAYLNEHQDKLSGLLEKLRLRREIHSNDQLIEIHRAMENLKTALR 153 Query: 177 LRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 L++N +D+ QI +I ID+AA I +L Sbjct: 154 LKLNTTDLKQEQIYQIAEKIDQAAVAIGRL 183 >UniRef50_C5SJF5 Transcriptional regulator, PadR-like family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SJF5_9CAUL Length = 190 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 LV+L ++S SHGYELI+AI++ G Y PSPG++YP L +L++ ITI + G+K Sbjct: 52 LVLLSLISEKPSHGYELIRAIDDRFNGQYAPSPGIVYPALSWLEDGGFITITPDTEGRKV 111 Query: 125 IALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDI 184 +TE G +L E E+VE + +A + RA+DN KA L R + + Sbjct: 112 ATITEAGTAFLAERAEEVERLFT--EAPQSAPEGPDFAPIFRAMDNLKAALRNRAAR-PL 168 Query: 185 SDAQIKKIIAVIDRAAFDITQ 205 + ++ I+ ID A I + Sbjct: 169 TQDELHAIVDGIDDLARRIER 189 >UniRef50_C7JI60 Transcriptional regulator PadR n=10 Tax=Proteobacteria RepID=C7JI60_ACEP3 Length = 196 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 100/196 (51%), Gaps = 4/196 (2%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSR 73 + RH+ + G + GR G G R R F +GE+RL++L ++S Sbjct: 2 KHRHKHAGGRNRQVFSPEGTAGSGGKHRHQHGRGGGRRGGRSRLFDYGEIRLLVLKMISE 61 Query: 74 DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQ 133 ++GYELIK IE G+YTPSPGVIYPTL +L+E I + E +K +T +G Sbjct: 62 KPTYGYELIKDIEEKFGGSYTPSPGVIYPTLTWLEEAGYIRSADGE-SRKNYQITPEGEA 120 Query: 134 WLEENREQVEMIEERI-KARCVGAALRQNPQM--KRALDNFKAVLDLRVNQSDISDAQIK 190 +L NR +E I R A G R+N M R ++N K L LR+ + A + Sbjct: 121 FLSANRVGLEEILSRTAAAEPEGRGGRKNIPMPVMRGMENLKTALRLRLRNGGLDLAAEE 180 Query: 191 KIIAVIDRAAFDITQL 206 KI A++D AA I Q+ Sbjct: 181 KIAALLDEAARGIGQV 196 >UniRef50_C8Q5D9 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8Q5D9_9ENTR Length = 273 Score = 153 bits (388), Expect = 3e-36, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 1/155 (0%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 GRR R F +GELRL++L I+++ SHGYELI + G Y PSPGV+YP L +L ++ Sbjct: 17 GRRARAFDYGELRLLLLAIIAKQPSHGYELIHEVNERLGGTYKPSPGVLYPALTWLYDRG 76 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNF 171 I E+GG+K+ +T++G +L N+ ++M+ R+ + G + A+D+ Sbjct: 77 YAEIDLEKGGRKRYRITDEGNAFLSANKTVIDMLVARVVPKAQGHGKSPQA-IVEAMDHL 135 Query: 172 KAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 K L LR ++D + +I +I AA I L Sbjct: 136 KRALSLRAKMEPVADQVVTRIGEIIHVAANQIEAL 170 >UniRef50_B1M5I1 Transcriptional regulator, PadR-like family n=7 Tax=Alphaproteobacteria RepID=B1M5I1_METRJ Length = 210 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 83/172 (48%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSR 73 + R G H HGH G G RFF HG+LRLVIL +++ Sbjct: 18 RVRAHRGPMGGDPRGRHGPHGHPGRGPGERRMFGRGGRGDLARFFAHGDLRLVILHLIAE 77 Query: 74 DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQ 133 HGYE+IKAIE G Y+PSPG +YPTL L+E +T+ EG K+ +T +G Sbjct: 78 KPRHGYEIIKAIEERVGGAYSPSPGTVYPTLTLLEELGHVTVTPGEGTKRLHTITPEGQA 137 Query: 134 WLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDIS 185 +L+ NR +E I R+ P + RA + K L +R+ + +S Sbjct: 138 FLDGNRPILEAILARMAEAEAARGDGPPPSVVRAKEGLKLALQMRLARGPLS 189 >UniRef50_B2PUN1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUN1_PROST Length = 152 Score = 152 bits (385), Expect = 5e-36, Method: Composition-based stats. Identities = 47/143 (32%), Positives = 84/143 (58%), Gaps = 1/143 (0%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQI 125 ++L ++++ S+GYE+IK I+ + G Y PSPGVIYPTL L+EQ + E +K Sbjct: 1 MVLSLVAKKPSYGYEIIKDIQEASNGLYVPSPGVIYPTLTLLEEQGFLESEVVERNRKSF 60 Query: 126 ALTEQGAQWLEENREQVEMIEERI-KARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDI 184 +T +GA L+ N+E +I ++ KAR + + +++ A+ FKA+L ++ + Sbjct: 61 KITAEGAAHLKANQETETIIFRKLAKARDMQHGGNLSEEIEMAVSRFKALLRHKMVLKQL 120 Query: 185 SDAQIKKIIAVIDRAAFDITQLD 207 S+ Q ++I +I+ A I Q++ Sbjct: 121 SEQQTRQIAQIINDAVQQIEQVN 143 >UniRef50_Q21BY2 Transcriptional regulator, PadR family n=5 Tax=Alphaproteobacteria RepID=Q21BY2_RHOPB Length = 215 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 53/145 (36%), Positives = 85/145 (58%), Gaps = 1/145 (0%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ELRLV+L +++ HGY+LI+A+E LT G Y PSPG++YPTL L + LI + EG Sbjct: 72 ELRLVLLKLIADKPRHGYDLIRAVEELTGGAYAPSPGIVYPTLTLLSDMGLIAEQSAEGA 131 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +KQ A+T +G L E +V + R++A ++RA+ N ++VL R+ + Sbjct: 132 RKQFAVTPEGTAHLAEQATEVAAMLARLEALGAMRERVDAVPVRRAMHNLRSVLQHRLGE 191 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + +++ +A+ID AA I +L Sbjct: 192 G-LDKERLQAAVALIDEAAQKIERL 215 >UniRef50_D2PQ95 Transcriptional regulator, PadR-like family n=2 Tax=Actinomycetales RepID=D2PQ95_9ACTO Length = 230 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GG G G + +R G++R IL +L+ +GY++I+ + + G + PSPG IY Sbjct: 67 GPGGPRGWKGPKARR----GDVRAAILAVLAEQPMNGYQIIQVVAERSGGAWKPSPGSIY 122 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 PTL L+++ L+ G++ LT++G ++ E+ ++V E + A Sbjct: 123 PTLQQLEDEGLVRADAA-VGRRTFTLTDEGRTYVAEHADEVSAPWEAMSANADEDENGLK 181 Query: 162 PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 P + + VL + A+ +K + + R + I Q Sbjct: 182 PLLGQVGTALWQVL---ATGTPEQQAKARKALVELRRTLYGILQ 222 >UniRef50_A6SZ38 Transcriptional regulator n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZ38_JANMA Length = 187 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 63/153 (41%), Positives = 99/153 (64%), Gaps = 3/153 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LR V+L ++S SHGYELIK+IE G Y+PSPG +YPTL L+E SL+++ Sbjct: 35 IFGHGGLRFVLLHLISEKASHGYELIKSIEERLGGAYSPSPGTVYPTLTLLEELSLLSVE 94 Query: 117 EEE-GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--QNPQMKRALDNFKA 173 E + GG+K+ +T+ G ++L+E+RE V+ + R+ GA R + PQ+KRA++N K Sbjct: 95 EADQGGRKRYQITDAGLRYLDEHREMVDAMLLRLNGGVDGAGPRGGRPPQVKRAIENLKL 154 Query: 174 VLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +R++ ++ Q A++DRAA + Q+ Sbjct: 155 AMRMRLSGETLTQEQANAFAAILDRAAQQLEQI 187 >UniRef50_A9GIC6 Transcriptional regulator, PadR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIC6_SORC5 Length = 207 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 1/148 (0%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G +R ++LD+L+ HGYE+I+AIE + Y PSPGVIYPTL L+E + E Sbjct: 48 DRGGVRYLVLDVLAERARHGYEVIQAIEQRSGDTYRPSPGVIYPTLQMLEELGHARVIEA 107 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 E G+K +T+ G + L+ NRE V+ ER + + + + +L Sbjct: 108 E-GRKIYEITDAGREDLKANREYVDEFYERFVETSWERFAEDFGDVMKRIGSLMKMLRHA 166 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQL 206 + + I+ A + + + V+D+AA +I +L Sbjct: 167 MRRGRITPAVLARTVKVLDKAAAEIEEL 194 >UniRef50_A5EFD0 Transcriptional regulator, PadR family n=2 Tax=Bradyrhizobium RepID=A5EFD0_BRASB Length = 236 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHG-----QCCGGRHGRGGGRRQRFFGHGELRLVIL 68 Q R + C+ + G G HG GGR G G RFFG G+LR ++L Sbjct: 34 QHRSDESCEEVRLGERGPGFGRHRGHGLFERDGRRGGRDEFGRGGGGRFFGPGDLRSLLL 93 Query: 69 DILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALT 128 ++ HGYELIKA+E L G Y+PSPG +YP L L++ I EGGKK A+T Sbjct: 94 WLIGEKPRHGYELIKAVEQLVGGAYSPSPGSVYPILSLLEDMGQIEAAASEGGKKLFAIT 153 Query: 129 EQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ-MKRALDNFKAVLDLRVNQSDISDA 187 + G Q L+++ +E + R++ + P+ + +A+ K L ++++ SDA Sbjct: 154 DAGRQALKDDAAAIEGLLSRMRIMARTMGGMRPPEPVLQAVQTLKMAL--KMHRPGWSDA 211 Query: 188 QIKKIIAVIDRAAFDIT 204 + ++ ++ RA +I Sbjct: 212 EANRVSDILTRAIAEIQ 228 >UniRef50_B6IW77 Transcriptional regulator, PadR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IW77_RHOCS Length = 334 Score = 144 bits (364), Expect = 2e-33, Method: Composition-based stats. Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G+ RL+ L +LS HGYELI+A+ +L G Y+PSPG++YPTL L++ + Sbjct: 81 LLDQGDPRLLALHLLSEKPRHGYELIRAMSDLLGGAYSPSPGMMYPTLSLLEDLGYVARD 140 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 E EGG+K LT GA +LEENR VE +R AR V R P+++ A+D K L Sbjct: 141 ESEGGRKPYTLTPAGALFLEENRPLVETALQR--ARSVRDRHRGIPEVEAAMDGLKRALA 198 Query: 177 LRVNQSDIS 185 R+++ ++ Sbjct: 199 GRLSRPSLT 207 >UniRef50_A8IL86 Transcriptional regulator n=8 Tax=Rhizobiales RepID=A8IL86_AZOC5 Length = 228 Score = 143 bits (361), Expect = 3e-33, Method: Composition-based stats. Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 19/218 (8%) Query: 4 HHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGEL 63 H GC H + R +GE G G G GG G R R G+L Sbjct: 15 HMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGGDFFRIGRMLAQGDL 74 Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK 123 +L+ L +++ HGYE+IK IE T G Y+PSPGV+YPTL FL+E +T E +G KK Sbjct: 75 KLLALSLIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEEAGYVTA-EPDGAKK 133 Query: 124 QIALTEQGAQWLEENREQVEMIEERI---------------KARCVGAALRQNPQMKRAL 168 + +TE+G +LEEN++ + + R+ K G + A+ Sbjct: 134 RFTITEEGRAYLEENKDVADALVGRLSEIGLKVGKMRRWMGKGEEGGEPSGLPRLVDAAI 193 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 +N K V ++ ++ ++ +I+ ++ A D+ ++ Sbjct: 194 ENLKDVAKAKLAENPRTE---TRIVEILAGVANDLREV 228 >UniRef50_Q2G591 Transcriptional regulator, PadR family n=2 Tax=Sphingomonadaceae RepID=Q2G591_NOVAD Length = 214 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 69/135 (51%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQG 131 ++ HGY+LI+A+ L G Y PSPGV+YPTL L ++ LI +G +K A T+ G Sbjct: 80 AQQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGLIAEEAGDGPRKAFAATDAG 139 Query: 132 AQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKK 191 L+ ++++ I R+KA +P ++RA+ N AVL R Sbjct: 140 RTELDGRSDELDAIVARLKALGDQGERSASPPVRRAMGNLHAVLRNRAMAEGFDTETAHA 199 Query: 192 IIAVIDRAAFDITQL 206 I ++D AA I +L Sbjct: 200 IADILDEAARRIERL 214 >UniRef50_D2M8Y5 Transcriptional regulator, PadR-like family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8Y5_RHOPA Length = 226 Score = 142 bits (359), Expect = 5e-33, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 14/163 (8%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R R G+L+L+ L +++ HGY++IK IE T G Y PSPGV+YPTL +L+E Sbjct: 36 RAGRMLAQGDLKLIALALIAEQPRHGYDIIKVIEEKTAGWYAPSPGVVYPTLTYLEETGH 95 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA----------RCVGAALRQNP 162 + + + EG KK T++G L NR E + +R+ + A P Sbjct: 96 V-VAQPEGAKKLYVATDEGRDHLAANRALAEAVFDRLASFGEMMRQQNGEGAPEAGDLPP 154 Query: 163 QMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 ++ ALDN + V ++ + ++A++ +A++ RAA ++ + Sbjct: 155 LLRAALDNLREVAIRQIAKDPDNEAEL---VAILARAAGELRK 194 >UniRef50_A5FQF6 Transcriptional regulator, PadR family n=2 Tax=Dehalococcoides RepID=A5FQF6_DEHSB Length = 182 Score = 142 bits (358), Expect = 7e-33, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 6/173 (3%) Query: 35 HQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYT 94 H E R +R R F G+++ VILD+L +HGYE+ +++E G Y+ Sbjct: 7 HNFERHSHPFDRFSHSFEKRSRMFKRGDMKFVILDLLKDKPAHGYEVTQSLEERFHGLYS 66 Query: 95 PSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 PS G +YP L L + +T E E GKK +T+ G ++L E E I+ER+ Sbjct: 67 PSTGSVYPVLQLLGDMEYVTSSEVE-GKKIYTITDGGKKFLHEQEETTNKIKERLWGWGN 125 Query: 155 GAALRQNPQMKRAL---DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 ++ + D + ++ +D A+I ++ ++D+ ++ Sbjct: 126 AKNQEYLQNIRTTMNYLDEIRELMGHIAVHND--PAKIIRVNNILDKTREEME 176 >UniRef50_B2Q1E3 Putative uncharacterized protein n=3 Tax=Providencia RepID=B2Q1E3_PROST Length = 183 Score = 140 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 2/159 (1%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G R F +LR+ IL +L+ ++GYELIK I T G Y PSPGVIYPTL L+E Sbjct: 14 GKSLSRMFNPKQLRVYILHLLADGSNYGYELIKKIGQETAGFYCPSPGVIYPTLTLLEEL 73 Query: 111 SLITIREEEG-GKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRAL 168 LIT +E+G G+K +LT +G +L + + ++ ++ A+ + A + +++ A+ Sbjct: 74 GLITAYKEQGKGRKCYSLTPEGKCFLLLKADILAEVQLKLSYAQELTAGNQFAKEIELAV 133 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 D FK++L + +++ Q +++ +I+ A I Q++ Sbjct: 134 DRFKSLLRHNIVLQELTKEQSMRVVEIINSAVERIEQVN 172 >UniRef50_Q1AYM9 Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYM9_RUBXD Length = 176 Score = 139 bits (350), Expect = 7e-32, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 2/168 (1%) Query: 39 HGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPG 98 G G G R+R FG G+L+ VILD+L R +HGY+LIKA+E ++G Y PSPG Sbjct: 3 RAPGGFFWRGSGFGPRRR-FGKGDLKYVILDLLERGPAHGYQLIKALEERSRGLYAPSPG 61 Query: 99 VIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 +YPTL L++ + E GKK +TE+G +L E R +E + R Sbjct: 62 SVYPTLQMLEDMGYVGSS-REDGKKVYQITEEGRGFLRERRRSLEEVWRRFGRGWDPGLE 120 Query: 159 RQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +++ L + + + + +++++ V+ AA I + Sbjct: 121 GELHEIRHELAHLWRLFGRKARAGRVDQEKLRRVRGVVVEAARRIEDI 168 >UniRef50_Q2NCW1 Putative transcriptional regulator n=4 Tax=cellular organisms RepID=Q2NCW1_ERYLH Length = 222 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 14/169 (8%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 RR R F GELRL +L +++R+ HGYELI+AIE++T G Y PSPG +YPTL L+E+ Sbjct: 54 KRRGRMFAQGELRLALLALIAREPRHGYELIRAIEDMTGGGYAPSPGAVYPTLQLLEEEG 113 Query: 112 LITI------------REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA-- 157 I E GGKK T+ G LEE E+V+ + ER+ A A Sbjct: 114 QIKPAKAKGKAKSEGGESETGGKKPFKATKSGKAELEERAEEVDQLMERLGAHGERAERV 173 Query: 158 LRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 ++P + RA+ N VL +R + I +I+ +ID A I +L Sbjct: 174 REKSPDLFRAMGNLANVLKIRARSGKLDQNTIDQIVDIIDEVAKRIERL 222 >UniRef50_UPI0001C3245B transcriptional regulator, PadR-like family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3245B Length = 255 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 4/144 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G++R L +L+ +GY++++A+E + G + PSPG +YP L L+++ L+ E++ Sbjct: 94 RGDVRTAALLLLAEQPRNGYQIMQALEERSNGAWRPSPGSVYPALQQLEDEGLVRSTEQD 153 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G+K LT++G Q++EE E V +++ A M+ A + A+ + Sbjct: 154 -GRKLFELTDEGRQYVEERGEDVPAPWDQMAGDISADAW---ALMQTAREVGMAMFQVMQ 209 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 + SD + ++I+A R + + Sbjct: 210 SGSDAQRREAQRILAATRRDLYRV 233 >UniRef50_D1AC56 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AC56_THECD Length = 217 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 7/162 (4%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 G G G R R G +R IL +L+ + ++GY+LI+ I + G + PSPG +Y Sbjct: 55 APWGGWAPGQGTRAR---KGNIRAAILTLLAEEPANGYQLIQRIGERSGGAWRPSPGAVY 111 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 P L L ++ LI E E G+K +LT+ G ++ + E++ ++ Sbjct: 112 PALQQLADEGLIRAAENE-GRKTYSLTDAGRAYVAAHAEELNEPWAQMTPEYGEGVPDL- 169 Query: 162 PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 +K+A AV+ + S AQ +++A + I Sbjct: 170 --LKQAARTGAAVMQIVHAGSPEQVAQAAQVLADARSRLYRI 209 >UniRef50_B9J7W6 Transcriptional regulator protein n=9 Tax=Rhizobium/Agrobacterium group RepID=B9J7W6_AGRRK Length = 227 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 89/203 (43%), Gaps = 30/203 (14%) Query: 29 EHCGHGHQHEHGQCCGGRHGRGGGRRQ-----RFFGHGELRLVILDILSRDDSHGYELIK 83 H R +GG R F +L+L+IL +LS HGYELIK Sbjct: 22 RHGERRDSRGRHGREFMRGFKGGMFGGGFRTGRKFDAADLQLIILALLSEQPRHGYELIK 81 Query: 84 AIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVE 143 +E + G Y PSPGVIYP L +L+E L + E G KK +TE G + +EENRE VE Sbjct: 82 TLEERSGGFYVPSPGVIYPALTYLEETGLAEV-EASGTKKLYRITESGQKRVEENRELVE 140 Query: 144 MIEERIKARCVGAAL---------------------RQNPQMKRALDNFKAVLDLRVNQS 182 ++ A A R+ + RA A L ++ Sbjct: 141 ATLAKLGAIGERMAHVKRAFDGENNGDDEGRDGPFGREAGDVHRARHLLHAALR---SKH 197 Query: 183 DISDAQIKKIIAVIDRAAFDITQ 205 S A+ +I A+++RAA DI + Sbjct: 198 PWSKAEGARIAAILERAAADIIR 220 >UniRef50_B4W6A1 Transcriptional regulator, PadR family protein n=2 Tax=Proteobacteria RepID=B4W6A1_9CAUL Length = 217 Score = 132 bits (331), Expect = 9e-30, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 11/208 (5%) Query: 6 EGCCKHEGQPRHEGCCKGEKSEHEH-------CGHGHQHEHGQCCGGRHGRGGGRRQRFF 58 GC + G+P G G G + G+ G HG G R F Sbjct: 12 NGCGEKHGRPGSFGFGHGFGHAFGRGMRGGRGADFGPGWDGGEARGRGHGHGRRGGGRLF 71 Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 HG LR V+L +++ SHGYELIKA+E G Y+PSPGVIYP+L L+E + + Sbjct: 72 DHGTLRWVLLSLIAEKPSHGYELIKAVETRLGGAYSPSPGVIYPSLTLLEEMGALE-SQT 130 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 EGGKK ++TE G L EN + E + A + ++ A+ + + R Sbjct: 131 EGGKKLYSITEAGRALLAENEAILRAAEATMDKFAARAL--RPTAIQDAIGRLRHTIHAR 188 Query: 179 VNQS-DISDAQIKKIIAVIDRAAFDITQ 205 + +++AQ++ I A++ AA + Q Sbjct: 189 LTGETALTEAQVQAIAAILAEAADKVEQ 216 >UniRef50_D2B5F1 Transcriptional regulator protein-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5F1_STRRD Length = 250 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G++R IL +L+ + +GY++I+ IE ++G + PSPG +YP L L ++ L+ + EE Sbjct: 102 RGDVRAAILALLTEEPHNGYQIIQEIERRSEGGWKPSPGAVYPALQQLTDEGLV-LSEEN 160 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G+K LTE G ++ E+ ++V E + + M A + A+L + Sbjct: 161 DGRKSFRLTEAGRAYVTEHADEVRAPWEEMTPDVDDSTWE---MMNLARQSGFAMLQILQ 217 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 SD Q K+I+ R + I Sbjct: 218 TGSDAQIRQAKQILTETRRKLYQI 241 >UniRef50_A3IWR1 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IWR1_9CHRO Length = 201 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 20/205 (9%) Query: 2 SHHHEGCCKHEGQPRHEGCCKGE--KSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFG 59 S+ H+ E + R SEH+H G G G H R G R Sbjct: 7 SYSHQSFRDLESRHRGRKHKAELLFASEHKHPGKGRPRRR-----GHHLRDGRTR---IP 58 Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G+++ ++L +L+ HGY+LI+ IE G Y PSPG +YPTL L+E + +T + E Sbjct: 59 RGDIKYLLLSLLAEKPQHGYQLIREIELRWGGFYRPSPGSVYPTLQLLEEGNYLTSEQLE 118 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 GKK +T+ G + L ++ V M+ V Q ++K L + K V+ Sbjct: 119 -GKKVYTITDSGKELLAQHEPSVSML-------DVVEEQPQLIELKTTLRDLKEVITQLT 170 Query: 180 NQSDISDAQIKKIIAVIDRAAFDIT 204 + + +I+++++ + + +I Sbjct: 171 RTGNKT--KIEQVVSRLKQLKREIY 193 >UniRef50_C3JSU7 Transcriptional regulator, PadR family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JSU7_RHOER Length = 267 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +++ + HGYELI+ I + G + PSPG IYP L L+++ L+ I E+ G Sbjct: 119 DVRAAILLLIAEEPMHGYELIQQIVERSGGVWKPSPGSIYPALSQLEDEGLVII-EKVAG 177 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K LTE+G ++EE+R + + ++ + ++ + Sbjct: 178 RKTAKLTEEGVAYVEEHRADLGAPWDDVRL----SVGEPEQDLRELIGQLMGAAGQVAAV 233 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + AQ+K V+ A + ++ Sbjct: 234 G--TPAQVKAAADVLVEARKSLYRV 256 >UniRef50_C5QNA0 PadR family transcriptional regulator n=4 Tax=Staphylococcus RepID=C5QNA0_STAEP Length = 187 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 4/164 (2%) Query: 28 HEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIEN 87 +H + G+ G GG R RFF G L+ VIL +L + HGY++IK +E Sbjct: 10 RQHMEKFEGFDFGRGATGFGSPRGGGRDRFFKKGNLQFVILKMLKEESRHGYQIIKDLEE 69 Query: 88 LTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEE 147 +G Y PSPG +YP L L+++ ++I + +G KK ++TE+G ++LEEN + + + Sbjct: 70 RFKGFYAPSPGSVYPILQMLEDREFVSISK-DGKKKVYSITEEGEKFLEENIDN-DAFTQ 127 Query: 148 RIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKK 191 R++ + ++ + F+ + + +Q + D ++KK Sbjct: 128 RMEQFQNIDFEQLKASREQLHEVFQGFM--KASQRALQDEEMKK 169 >UniRef50_C8SSA8 Transcriptional regulator, PadR-like family n=2 Tax=Mesorhizobium RepID=C8SSA8_9RHIZ Length = 229 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 1/151 (0%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R R G+L+L+ L +L+ HGY++IKA+E T G Y+PSPGV+YPTL FL+E Sbjct: 52 RAGRMLADGDLKLITLSLLAEAPRHGYDIIKALEERTSGIYSPSPGVVYPTLTFLEEAGY 111 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 + EG KK ++TE G L +NRE ++ + + ++ A ++ + Sbjct: 112 -AVSSSEGNKKVFSITEAGQAHLADNREMIDGVLDHLERFGRKMAKARDWFGWNDDGEDR 170 Query: 173 AVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 + + + + I + A DI Sbjct: 171 RGGRGGRGERSETRDEFRAIRHRLRAALGDI 201 >UniRef50_C8XGD0 Transcriptional regulator, PadR-like family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGD0_NAKMY Length = 263 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L HGY++I+ IE + G + PSPG +YPTL L+++ L+ E + G Sbjct: 95 DVRSAVLALLVDQPMHGYQIIQEIERRSHGAWKPSPGSVYPTLQQLEDEGLVRAEELD-G 153 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 ++ LTE G + E ++ + + R + Q+ + A + Sbjct: 154 RRVYRLTEDGRRVTAEKAQEFAGMWDAFAPR------EDDTQIGDLVFQVGAAFVHVMRT 207 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + QI + V+ R D+ ++ Sbjct: 208 GN--PEQIAQARKVLARTRGDLYRI 230 >UniRef50_B0RN88 Transcriptional regulator, PadR-like family n=5 Tax=Xanthomonas RepID=B0RN88_XANCB Length = 177 Score = 127 bits (319), Expect = 2e-28, Method: Composition-based stats. Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 6/164 (3%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GR RGG R GHG+LRL++L ++ + HGYEL++ I L +G YTPS G IY Sbjct: 15 TPAGRARRGGT--ARPLGHGDLRLLLLALIEQQPRHGYELMRQIAQLFKGLYTPSAGTIY 72 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ- 160 P L L+ + + +++ G+K+ +TE G +R+ ++ R R Q Sbjct: 73 PALAQLEADGWV-LTDQDHGRKRYQITEAGRGHASAHRDALDAALARTHRRARDLIKAQT 131 Query: 161 NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 P ++ A+ K L R ++A+ +I A+++ AA + Sbjct: 132 PPPIRDAIHRIKHGLFARH--GQWTEAETARIAALLNAAADGME 173 >UniRef50_Q4J6E8 Transcriptional regulator PadR-like family n=2 Tax=Sulfolobus RepID=Q4J6E8_SULAC Length = 159 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 14/147 (9%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G LRL++L L+ + YE+IK+IE +G Y PS G IYP L L I I+E + Sbjct: 13 RGTLRLLVLSSLAEKPMYLYEIIKSIETKAEGFYRPSTGSIYPVLRSLARDGYIIIQERD 72 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALD-NFKAVLDLR 178 GKK +LT++G + +EE + ++E + R +P +R +D F L + Sbjct: 73 -GKKIYSLTDKGVKKVEEIKIEIESLFTR------------DPLKRRVIDLLFNIGLTVH 119 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQ 205 +N+ I D + ++I +++ + + Sbjct: 120 INRKKIDDKVLNQLITDLEKCMALVEE 146 >UniRef50_B2IYD3 Transcriptional regulator, PadR-like family n=4 Tax=Cyanobacteria RepID=B2IYD3_NOSP7 Length = 208 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 7/179 (3%) Query: 30 HCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLT 89 H H + GRG G R G+++ ++L++LS SHGY+LIK +E Sbjct: 31 HGRHHGRDRDKHFGNEMFGRGWGDEHRTR-RGDIKFILLELLSEHPSHGYDLIKEMETRY 89 Query: 90 QGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEEN--REQVEMIEE 147 G SPG +YPTL L+E + + EGGK+ +T++G + L E +E + + Sbjct: 90 GGFRRLSPGSVYPTLQLLEEGGYLKSAQ-EGGKRIYTITDEGRKLLAERAQQETSDTPWD 148 Query: 148 RIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 +K+ G ++ +++ A AV+ ++ +I ++ ++++ +I + Sbjct: 149 TVKSFVTGK-PQEFIELRNAATELAAVVVQVARSGNV--ERINRVRELLEQVKREIYTI 204 >UniRef50_A0Q9V4 Transcriptional regulator, PadR family protein n=21 Tax=Actinomycetales RepID=A0Q9V4_MYCA1 Length = 256 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ HGYE+I+ I + G + PSPG +YPTL L ++ LIT E +G Sbjct: 117 DVRAAVLALLAERPMHGYEMIQLIAERSNGLWKPSPGSVYPTLQLLADEGLITATETDGS 176 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK LT+ G E IE A + ++ A+ + + Sbjct: 177 KKLFELTDDGRA-------AAEKIETPPWDEIAEGADPGHMNLRAAIGQLFGAVG--QSA 227 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 S Q ++I+ +++ A +I + Sbjct: 228 HTASPEQQQRIVDILNNARREIYGI 252 >UniRef50_Q0S0L1 Possible transcriptional regulator n=3 Tax=Nocardiaceae RepID=Q0S0L1_RHOSR Length = 218 Score = 125 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 8/193 (4%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSR 73 + R + H G + + G G H G R G++R IL +L+ Sbjct: 18 RERTGRPEGPHRHGHRRGRFGPEGDPGFGP-GMHFGRGRGRGGRGRRGDVRSAILLLLTE 76 Query: 74 DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQ 133 + HGYELI+ I + G + PSPG IYP L L+++ L+ I E+ G+K LT++G Sbjct: 77 EPMHGYELIQQIVERSDGVWKPSPGSIYPALSQLEDEGLVLI-EKVAGRKTARLTDEGEA 135 Query: 134 WLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKII 193 ++E N+ ++ + ++ + R ++ + D D Q+++ Sbjct: 136 FVEANKTELGTPWDDVRE----SVGRPAEDLRGLIGLLMGAAGQVAAVGD--DEQVRRAG 189 Query: 194 AVIDRAAFDITQL 206 ++ A + +L Sbjct: 190 EILTEARRAMYRL 202 >UniRef50_UPI000050FEE8 transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEE8 Length = 185 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 25/187 (13%) Query: 33 HGHQHEHGQCCGGRHGRGGGRRQRF---------FGHGELRLVILDILSRDDSHGYELIK 83 HG G GG + + R G++R IL +L+ HGY++I+ Sbjct: 7 HGGFSRRGGDWGGSNIWEAMEQLRSSFNPKQPFRMNRGDVRAGILTLLAEAPMHGYQIIQ 66 Query: 84 AIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVE 143 IE + G++ PSPG +YPTL L ++ LI+ E G+K +LTE G + +E E Sbjct: 67 EIEERSGGSWKPSPGSVYPTLQLLTDEGLISA-ESSSGRKTYSLTEAGREQVESEPES-- 123 Query: 144 MIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDI----SDAQIKKIIAVIDRA 199 + P RA + KA ++L + + S Q+ + + ++ Sbjct: 124 ---------SAPWETTKKPDAPRAANLAKAGVELAQAAAQVGRTGSKEQVAEAVTALEET 174 Query: 200 AFDITQL 206 + + Sbjct: 175 KRRLYSI 181 >UniRef50_D1VPN8 Transcriptional regulator, PadR-like family n=1 Tax=Frankia sp. EuI1c RepID=D1VPN8_9ACTO Length = 267 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 5/141 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ HGY+L++AI T G + PSPG +YPT+ L+++ L+T+ +GG Sbjct: 91 DVRAAVLLLLADGPRHGYQLMQAIAERTGGAWQPSPGAVYPTISQLEDEGLVTVT-ADGG 149 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 ++ + +TE G +L +NR+ + AR A + A+ + Sbjct: 150 RRLVTITEAGQAYLAKNRDTIGDPFAAFTAR---AGRAGGVDLLGAVQELSGAVWQVARA 206 Query: 182 SDISD-AQIKKIIAVIDRAAF 201 D A K++ RA + Sbjct: 207 GDAGQTAAAHKVLTDARRALY 227 >UniRef50_B8HG13 Transcriptional regulator, PadR-like family n=4 Tax=Micrococcineae RepID=B8HG13_ARTCA Length = 206 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 10/148 (6%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G++R IL +L+ S+GY LIK I T+G + PSPG IYPTL L ++ LI Sbjct: 66 SRGDVRAAILSLLAESPSNGYGLIKTIAEKTEGAWRPSPGSIYPTLQQLVDEGLIEAM-S 124 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 EG + +LTE G +++ + E+++ + ++ + F+ Sbjct: 125 EGRGTEFSLTETGREYVAGHTEEMDSAWNAVPEGSDREFHHSIGKLMGVIHQFR------ 178 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQL 206 S +++ Q I +D + ++ Sbjct: 179 ---SGVTEEQRTAAIEKLDETRRALYKI 203 >UniRef50_B4DB33 Transcriptional regulator, PadR-like family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB33_9BACT Length = 224 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 31/211 (14%) Query: 25 KSEHEHCGHGHQHEHGQC-----CGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGY 79 + EH HC H GG G G R R F +L+ +IL ++S +HGY Sbjct: 11 RGEHPHCAHKGFFGRHGGEFFDRFGGGPGGPGFRPGRLFTSEDLQFIILALISAKPAHGY 70 Query: 80 ELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENR 139 E+IK IE + G Y PSPGVIYP L +L+E SL + E EG KK +TE GA+ L +NR Sbjct: 71 EIIKEIERRSSGVYAPSPGVIYPALTYLEEASL-AVSEAEGAKKLYRITEAGAEHLAKNR 129 Query: 140 EQVEMIEERIKARCVGAALRQN------------------------PQMKRALDNFKAVL 175 +Q + + ER+ A ++ M+ + K L Sbjct: 130 QQTDEMLERLAQWGERIAHFRDQMAQEEEADERWGGSPRDQQRKEWRAMREEFHDMKREL 189 Query: 176 DLRVNQSD-ISDAQIKKIIAVIDRAAFDITQ 205 + + + ++++ ++ RA +I Q Sbjct: 190 KAALFEKRSAPMEEKQRVLEILRRAIAEIRQ 220 >UniRef50_A1R8I7 Putative transcriptional regulator, PadR family domain protein n=2 Tax=Actinobacteria (class) RepID=A1R8I7_ARTAT Length = 178 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%) Query: 46 RHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLD 105 R + G R G GELR IL +L+ HGY++I+ IE + G++ PS G +YPTL Sbjct: 28 RFEKRSGTRA---GRGELRTAILALLAERPMHGYQIIREIEERSGGSWKPSAGSVYPTLQ 84 Query: 106 FLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMK 165 L ++ ++ EE G+K +LTE G + + + E E A + ++ Sbjct: 85 LLADEGFVS-TEESNGRKIYSLTEAGREDVA-SAETAAPWESGAGTHGFAALPKAGVELA 142 Query: 166 RALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 +A + Q+++ + V++ A + + Sbjct: 143 QA---------AAQVGRTGTPKQVQEAVTVLEDARRRLYSI 174 >UniRef50_C2AQN6 Predicted transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AQN6_TSUPA Length = 246 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 9/147 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G++R+ +L +L + HGY+++ +IE T G + PSPG IYPTL L+++ LI+I E E Sbjct: 86 RGDVRIAVLKLLESEPMHGYQIVSSIEERTAGAWKPSPGAIYPTLSQLEDEGLISI-ERE 144 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G+K LT+ G +++ E+ + + ++ L V Sbjct: 145 NGRKVATLTDAGREYVTESLADNDPF------AGFAGGSEERGHLRDTLHELHEVTRRVG 198 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 QI + A++ A I L Sbjct: 199 RTGGG--EQIAAVDAILGDAIKQIYLL 223 >UniRef50_B8H9F8 Transcriptional regulator, PadR-like family n=3 Tax=Micrococcineae RepID=B8H9F8_ARTCA Length = 180 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 9/148 (6%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G GE+R +L +L+ HGY++I+ IE + G++ PS G +YPTL L ++ +I EE Sbjct: 38 GKGEVRAAVLALLAERPMHGYQIIREIEERSGGSWKPSAGSVYPTLQLLADEGVIRA-EE 96 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 G+K +LTE G N + K ++ +A + Sbjct: 97 SNGRKIYSLTEAGRDEAAGNA--ASNPWAGAGPQSTAGFASLP---KAGVELAQAAAQV- 150 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQL 206 + Q+K+ +AV+D A + + Sbjct: 151 --GRTGTPEQVKQAVAVLDEARRRMYSI 176 >UniRef50_C3MJS4 Transcriptional regulator PadR family protein n=9 Tax=Sulfolobus RepID=C3MJS4_SULIL Length = 148 Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 11/149 (7%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L+ ++L+ L+ YE+IK+IE +G+Y PS G IYP L L E+ L+ ++ Sbjct: 10 LKKGALKYLVLECLNEKPMRTYEIIKSIEKKFEGSYRPSTGSIYPVLKGLVEKDLVEVK- 68 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 E GKK +T++G + LEE + + + +G + + Q+ + + + L Sbjct: 69 VENGKKIYIITDKGKKELEEIKNK--------SLKLLGDNAKFSRQILQ--ELLQIAFYL 118 Query: 178 RVNQSDISDAQIKKIIAVIDRAAFDITQL 206 N+S I + I+KII + ++ + Sbjct: 119 YNNRSKIDENNIQKIIQHLRNCRNELRDI 147 >UniRef50_C6NX27 Transcriptional regulator, PadR-like family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX27_9GAMM Length = 140 Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 5/144 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 LR V+L L R+ HGYELIK + + G Y+PSPG+IYP L L+E L+ + E G K Sbjct: 2 LRFVVLQELDREPCHGYELIKRLTERSGGIYSPSPGMIYPMLTMLEELGLVLVTES-GNK 60 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQS 182 ++ +LT++G +L+ENR + + ER++A A M+R L + + RV + Sbjct: 61 RRYSLTDRGKDFLDENRALTQAVAERLEAL----AKDDWENMRRHLQGLRDAVHERVAVA 116 Query: 183 DISDAQIKKIIAVIDRAAFDITQL 206 + ++ +++ A + L Sbjct: 117 HGQRQVVARLEEILENALKQVRNL 140 >UniRef50_C6WET7 Transcriptional regulator, PadR-like family n=11 Tax=Actinomycetales RepID=C6WET7_ACTMD Length = 316 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +R ++ +L+ HGYE+I+ I T G + PSPG +YPTL L ++ L+ EE+GG Sbjct: 172 NVRAAVIALLAERPMHGYEMIQEIGQRTDGLWKPSPGSVYPTLQLLADEGLVVAAEEQGG 231 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK LTE G E+ E V E+ G A ++ A A + V+ Sbjct: 232 KKLFQLTESGRTE-AESAEGVPPWEQVTDGVDQGEAR-----LREAAKQIGAAMMQMVHA 285 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 ++ Q ++ ++D + + Sbjct: 286 G--TEDQQRRAAELLDETRRKLYAI 308 >UniRef50_Q4ZPG6 Transcriptional regulator PadR-like n=13 Tax=Pseudomonas RepID=Q4ZPG6_PSEU2 Length = 196 Score = 119 bits (298), Expect = 6e-26, Method: Composition-based stats. Identities = 46/148 (31%), Positives = 83/148 (56%), Gaps = 4/148 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G+L+L++L +++ +HGY+LI+ IE L +G Y PSPGVIYPTL FL+E ++ Sbjct: 40 VFAPGDLKLLLLALIAEQPAHGYDLIRKIEGLFEGAYCPSPGVIYPTLTFLEESEMV-AG 98 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRALDNFKAVL 175 + + GKK +T+ G Q LE+ +E + RI ++ + P++ A+ N + L Sbjct: 99 DAQAGKKLYTVTDAGRQSLEDQAVALEGVRMRIDVSKRSLRGHDRPPEIHEAVHNLRHAL 158 Query: 176 DLRVNQSDISDAQIKKIIAVIDRAAFDI 203 + + S +I ++ +++ A + Sbjct: 159 QMHHGR--WSPEEILRVSELLNSTARAV 184 >UniRef50_Q8NLG3 Predicted transcriptional regulators n=4 Tax=Corynebacterium RepID=Q8NLG3_CORGL Length = 192 Score = 119 bits (298), Expect = 8e-26, Method: Composition-based stats. Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 9/145 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +LR VIL +L + HGY++I I T+GN+TPSPG IYPTL L+++ LI+I E G Sbjct: 57 DLRNVILVLLEAESMHGYQIITTISEQTEGNWTPSPGTIYPTLSMLEDEGLISIS-HEMG 115 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K LTE+GAQ + +N++ I E + R + +R Sbjct: 116 RKMARLTEEGAQEVAKNKDAWGSILEAYRNPESREV--------RVFNIRSEFHKVREAA 167 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 D + ++II ++ RAA DI +L Sbjct: 168 KAAPDDKAEQIIEILRRAADDIKRL 192 >UniRef50_D1BI54 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BI54_SANKS Length = 271 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 7/143 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +LS HGY+LI+ I + G ++PSPG IYP L+ L+++ LI I + G Sbjct: 109 DIRGAVLLLLSEQPMHGYQLIQEITERSGGRWSPSPGAIYPALNLLEDEGLIVIT-ADSG 167 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K +LT +G +E++RE + +R G A ++ A+++ Sbjct: 168 RKLASLTPEGVSHVEQHREDLVAPWDR----ATGQAAHPARALREAMESLGGAAHQIART 223 Query: 182 SDISDAQIKKIIAVIDRAAFDIT 204 + AQ + + +++A ++ Sbjct: 224 G--TQAQTAQALRTLEQARRELY 244 >UniRef50_UPI000038E215 transcriptional regulator n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E215 Length = 196 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 11/142 (7%) Query: 19 GCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHG 78 G EK E + G + H G H G G +R L+ +IL++ S ++ G Sbjct: 24 GKRYSEKDEKDCNGMNGEMGHRMGNMGHHRMGSGENRRGMHGFGLKYLILNMASSEEITG 83 Query: 79 YELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLE-- 136 ++I ++ T+G + PSPGVIYP L L E+ + +RE + KK TE+G + ++ Sbjct: 84 VDVIDRVDRRTEGRWVPSPGVIYPALRKLYEEGYLEMRE-DNNKKYYKATEKGKEVVKDT 142 Query: 137 -----ENREQ---VEMIEERIK 150 + +E+ ++ I ER++ Sbjct: 143 IFPWNQRKEEINSIDTILERME 164 >UniRef50_B2TFG8 Transcriptional regulator, PadR-like family n=67 Tax=Proteobacteria RepID=B2TFG8_BURPP Length = 287 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 41/240 (17%) Query: 2 SHHHEGCCKHEGQPRHEGCCKGEKSEHEHC-----------GHGHQHEHGQCCGGRHGRG 50 +HHH+ + E H G HEH G G Sbjct: 34 AHHHDCRGERGRDEHDEFRAAPRGGPARHGYDRFTLHALWHAIGRHHEHRGGGRGGRFGG 93 Query: 51 GGR----------RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI 100 G R R F +L+L++L ++ SHGYELIKA+E + G Y+PSPG++ Sbjct: 94 GPGGFGGDGDGFPRGRKFSSDDLQLLLLSMIGSQPSHGYELIKALETRSNGFYSPSPGMV 153 Query: 101 YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIK--ARCVGAAL 158 YP L +L+E +T++ EG +K+ L+E G ++L NR++ E++ ++ AR + + Sbjct: 154 YPALTYLEELGYVTVQL-EGNRKRYELSETGREYLAANRDRAELMLAKLSHIARKMDSVR 212 Query: 159 RQN--------------PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 R P++ A K L + + + AQ ++I ++ RAA +I Sbjct: 213 RAFAGEEPADISEGGWLPELSEARRALKHAL---LRRDNAPAAQQRRIAEILLRAAKEIE 269 >UniRef50_C1RLJ9 Transcriptional regulator, PadR family n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RLJ9_9CELL Length = 230 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 7/145 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ S+GY LIKAI T G + PSPG +YPTL L ++ L+T + Sbjct: 90 DVRAAILQLLAEFPSNGYGLIKAIGERTGGLWRPSPGSVYPTLQQLTDEGLVTPTDAGSA 149 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 + + LTE+G ++E + +++ R ++ + A VL R Sbjct: 150 RTEYTLTEEGRAYVEAHPDELAAAWGPAAQR-----WEEHGDLIEASGKLLGVL--RQVG 202 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 ++ + Q ++ + +D D+ ++ Sbjct: 203 AEGTAEQRERTVQKLDELRRDLYRM 227 >UniRef50_A8M728 Transcriptional regulator, PadR-like family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M728_SALAI Length = 189 Score = 116 bits (290), Expect = 5e-25, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 5/142 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +R +L +L+ HGYE+I+ I++ T G + PSPG +YPTL L+++ +I E GG Sbjct: 48 NVRNAVLALLTERPMHGYEMIQEIDSRTGGAWRPSPGSVYPTLQLLEDEGVIVSTAEGGG 107 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K+ LT QG E+ + V + + + + V+ Sbjct: 108 RKRFTLTPQGEPEAAESART--PPWAEVTDTTVTNWHQVREAGTQVMYALRQVMT---TG 162 Query: 182 SDISDAQIKKIIAVIDRAAFDI 203 +D + +++ R + I Sbjct: 163 TDDQRERAAQVLGETRRKLYAI 184 >UniRef50_C5C5Y5 Transcriptional regulator, PadR-like family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C5Y5_BEUC1 Length = 277 Score = 116 bits (290), Expect = 5e-25, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 5/108 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L + HGY+L++ I + G++ PSPG IYP L+ L ++ L+ + EGG Sbjct: 113 DVRAAVLLLLHEEPMHGYQLMQEIAERSGGSWRPSPGAIYPALNLLADEGLVELS-AEGG 171 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALD 169 ++ +LT+ G + E+ + + A G + Q++ A++ Sbjct: 172 RRLASLTDAGRAHVTEHADALGNPW----ADGAGRGPSAHRQLREAIE 215 >UniRef50_B4SHM6 Transcriptional regulator, PadR-like family n=3 Tax=Stenotrophomonas RepID=B4SHM6_STRM5 Length = 186 Score = 115 bits (289), Expect = 7e-25, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 + R G+LRL++L ++ HGYEL++ I N YTPS G +YP L + Sbjct: 17 PRRNGQPRVLSRGDLRLLVLALIGEQPRHGYELMQLISNQFMQAYTPSAGTMYPLLASFE 76 Query: 109 EQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC-VGAALRQNPQMKRA 167 + I E + GK+ +T G L+ R QV + + R R P + A Sbjct: 77 QAGWIEAEEVD-GKRIFRITAAGEFELKVQRTQVRLAQRRAFDRAREITKASLPPPLAGA 135 Query: 168 LDNFKAVLDLRVNQ 181 L FK L + Sbjct: 136 LREFKRALVHHHGR 149 >UniRef50_Q3SN82 Transcriptional regulator, PadR family n=3 Tax=Nitrobacter RepID=Q3SN82_NITWN Length = 141 Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 14/146 (9%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G+LRLV L ++S HGY++I+ +E +T + PSP V++P L L E+ +T Sbjct: 6 SKGVAEGDLRLVALSLISEAPRHGYDIIQTVEKMTADWFLPSPNVVHPMLAKLVEERCLT 65 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + + ++T++G +LE++R++ + + R+KA + + ++ Sbjct: 66 ASADP--PRLFSITDEGRAYLEQHRDRADAVLNRLKA------------LGERVTRWRQA 111 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAA 200 L + Q + + ++ V+ RAA Sbjct: 112 LGVAERQKEADADSTEGLLDVLARAA 137 >UniRef50_A9WKS9 Transcriptional regulator PadR-like family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WKS9_RENSM Length = 217 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 8/147 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G++R IL LS + +GY L+KAI + G + PSPG +YP L LQ + LI + E Sbjct: 76 KGDVRNAILSRLSDSNYNGYGLMKAIALHSDGAWRPSPGSVYPALSGLQAEGLI-VSIGE 134 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G + + L+E+G ++ E+++++ + ++ GAA + + + + + Sbjct: 135 GRRTEFELSEEGRSYVAEHKDELAAVWAEVREET-GAAHDLRLSIGKLMGAVQQI----- 188 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 D ++ Q++ + A +D A I +L Sbjct: 189 -TMDGTEEQLRTVTASLDEARRTIYKL 214 >UniRef50_A4G020 Transcriptional regulator, PadR family n=4 Tax=Methanococcus maripaludis RepID=A4G020_METM5 Length = 152 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 12/145 (8%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE-EEGGK 122 +++IL L + HGY LI I +T + SP ++YP L L+ LI + + E+ GK Sbjct: 12 KILILKFLEEEPLHGYLLISKIGEITG--ISVSPSMVYPILSNLKTNGLIEVEKTEDRGK 69 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ- 181 K LTE G +L+ENRE+V+ ++ +A + K + L + Sbjct: 70 KIYKLTETGHSFLDENREKVDYCMKKSEALYYFHNGGGS--------ELKKAVHLAFEEF 121 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 +I D + KKI ++ + A DI L Sbjct: 122 MNIDDEKRKKIGEIMQKCAKDIRYL 146 >UniRef50_A4YE88 Transcriptional regulator, PadR family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YE88_METS5 Length = 154 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 13/150 (8%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L+ +I+D L H YE++K IE G Y PSPG +YP L L + L+ + E Sbjct: 8 LRRGALKFLIMDALHHKPMHAYEIMKTIEGKFNGVYKPSPGSLYPVLKNLIREGLVKVEE 67 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 + GKK +LT++G + E + + I ++ F L L Sbjct: 68 RD-GKKVYSLTDEGLKKWTEAKANINSILSTPVDYKKLVSM-----------LFDISLVL 115 Query: 178 RVNQSDISDAQI-KKIIAVIDRAAFDITQL 206 + + D ++ ++ + + I ++ Sbjct: 116 YSYRDKMFDEKVYNQVSSALLECRAKIERI 145 >UniRef50_D1YXU7 PadR-like family transcriptional regulator n=2 Tax=Euryarchaeota RepID=D1YXU7_METPS Length = 106 Score = 113 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R G L++++L I+S+ HGY++I AIE +T G++ PSPG IYP LDFL+ + ++ Sbjct: 7 GREMRKGFLKMIVLKIISKKPIHGYDIIHAIETITHGHWVPSPGSIYPVLDFLEARGYVS 66 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIK 150 + E + KK +TE+G + LE E+ + E + Sbjct: 67 MEEIDR-KKVYTITEEGKKALEAIEEKRRQLTEEMS 101 >UniRef50_A1SQM2 Transcriptional regulator, PadR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SQM2_NOCSJ Length = 234 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 10/170 (5%) Query: 44 GGRHGRGGGRRQRF--FGHGELRLVILDILSR-----DDSHGYELIKAIENLTQGNYTPS 96 G G G RQR G++R ILD++ + +GY++I+ I + G + PS Sbjct: 52 AGLFGLAQGDRQRGPRVRRGDVRTAILDVVRTAQWNGEPVNGYQVIQQIAERSNGAWRPS 111 Query: 97 PGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 PG +YPT+ L+++ L+ E+ GG++ + LT +G ++ ++ +++ + + Sbjct: 112 PGSVYPTIQQLEDEGLL-ATEDTGGRRSLRLTAEGEAYVADHADELSSVWAPFEEPERDE 170 Query: 157 ALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +K + + V S+ Q + I V+ + + Sbjct: 171 TQGRYADLKPEIGQVMGAVWQIVTTG--SEQQRRAAIDVLVETRRKLYGI 218 >UniRef50_C7QEY5 Transcriptional regulator, PadR-like family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QEY5_CATAD Length = 334 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 4/143 (2%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R+ IL +L ++GY+L++ IE T G + PS G IYP L L+++ ++ E E G Sbjct: 187 DVRITILILLDEGPANGYQLMQEIEQRTNGAWKPSSGSIYPALQQLEDEGIVQTTEGE-G 245 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV-LDLRVN 180 +K AL+++G ++ +NR + E + +++ + + + Sbjct: 246 RKMFALSDEGKTYVRDNRAKWTAPWE--GMEEEEGPSEEATKIRDVIAQLAMAYMQVIQV 303 Query: 181 QSDISDAQIKKIIAVIDRAAFDI 203 +D A+ +++ +A + I Sbjct: 304 GTDSQRAEASRVLVGARQALYRI 326 >UniRef50_Q137X5 Transcriptional regulator, PadR family n=2 Tax=Rhodopseudomonas palustris RepID=Q137X5_RHOPS Length = 211 Score = 113 bits (282), Expect = 5e-24, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 17/162 (10%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 R G R R G G+L+L+ L +++ HGY++IK +E T GNY PS ++YPTL L+ Sbjct: 42 RRGMRAGRMLGQGDLKLLALALIAELPRHGYDIIKVVEEATGGNYAPSSSLVYPTLTLLE 101 Query: 109 EQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--------- 159 E + + EG KK +T++G L NR ++ +R+ A +L Sbjct: 102 ELGHLR-SQSEGSKKLYVITDEGQAHLAANRTVADVAFKRLAAYRKRGSLPCRHHRDAEP 160 Query: 160 -------QNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIA 194 M+ ALDN V R+ Q ++A++ I+A Sbjct: 161 NEVEHAGLPALMRAALDNLSDVAGKRILQDPATEAELVAIVA 202 >UniRef50_C7LZY3 Transcriptional regulator, PadR-like family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZY3_ACIFD Length = 183 Score = 112 bits (281), Expect = 6e-24, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 +R IL +L HGYEL+ I + G + PSPG IYPTL L++Q L+ +G + Sbjct: 51 IRAEILRLLLDGPKHGYELMNLIAEQSGGAWQPSPGSIYPTLQLLEDQGLV-ASASDGDR 109 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQS 182 + LT+ G RE+ E ++ A R P++ + + + + ++ + Sbjct: 110 RVYQLTDAG-------REEAERLQHEPGPHAGPAGARLGPEIAQVMGALRTIA---MSGT 159 Query: 183 DISDAQIKKIIAVIDRAAFDI 203 + IA R + I Sbjct: 160 PEQRDAAQSAIAEFRRTLYQI 180 >UniRef50_Q4C4V0 Transcriptional regulator PadR-like n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C4V0_CROWT Length = 152 Score = 112 bits (280), Expect = 7e-24, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 10/137 (7%) Query: 68 LDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIAL 127 L +L+ HGY+LIK IEN G Y PSPG +YPTL L+E++ +T +E E GKK ++ Sbjct: 18 LSLLAEKPQHGYQLIKEIENRWGGFYRPSPGSVYPTLQQLEERNYLTSQEVE-GKKVYSI 76 Query: 128 TEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDA 187 T+ G Q L + E + + + ++K L + + V+ ++V +SD S Sbjct: 77 TDSGEQLLAQQPSSAETLNK-------SEEQPKLIELKMTLRDLQEVI-MQVTRSDKSKN 128 Query: 188 QIKKIIAVIDRAAFDIT 204 I K+++ + + +I Sbjct: 129 -IDKVLSSLKKLKKEIY 144 >UniRef50_C7P8R4 Transcriptional regulator, PadR-like family n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P8R4_METFA Length = 149 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 11/145 (7%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L+ +IL +L +++ HGY +++ + + Y PS GVIYPTL L+ I ++E Sbjct: 7 RGSLKYLILYLLEKEELHGYAIMQKLNEMFV-YYKPSSGVIYPTLQSLRRSGYIEAVKKE 65 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 KK +TE+G ++L+EN E++E I I+A L K L V Sbjct: 66 -DKKLYKITEKGKKYLKENEEKLENIFSHIEAVRGFYELGG--------KELKDAARLIV 116 Query: 180 NQ-SDISDAQIKKIIAVIDRAAFDI 203 +++D Q K+I + A I Sbjct: 117 KNFHNLNDRQKKEIEKTLKETARKI 141 >UniRef50_Q47QT2 Transcriptional regulator, PadR family n=2 Tax=Actinomycetales RepID=Q47QT2_THEFY Length = 240 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 1/143 (0%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ GYE+IK + G + SPG +YP L L+ + L+T+ G Sbjct: 86 DVRTGILLLLAERPMSGYEIIKEGRERSNGVWRLSPGSVYPVLQQLESEGLVTLAATGVG 145 Query: 122 KKQ-IALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 +++ LTEQG ++ E+ ++ E R A AV + Sbjct: 146 RRRPYELTEQGHAYVAEHAAELTPPWESAAQEYEETHARHLELASLASQLTAAVAQVSQV 205 Query: 181 QSDISDAQIKKIIAVIDRAAFDI 203 +D ++K+++ ++ + I Sbjct: 206 GTDAQVERVKQLLVKARKSVYRI 228 >UniRef50_B5GFD7 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=B5GFD7_9ACTO Length = 244 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L HGYE+I+ I + G + PSPG +YPTL L+++ LI R E G Sbjct: 70 DVRASILALLKDRPMHGYEMIQEIAERSGGAWKPSPGSVYPTLQLLEDEGLILSR-SESG 128 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK ALTE+G + E + G ++++A Sbjct: 129 KKLFALTEEGRAAADA------GPEAPWEEASKGVDWEAVGEIRQAGFGLMEAFGQVWKT 182 Query: 182 SDISDAQIKKIIAVIDRAAFDIT 204 S Q ++ +AV++ + Sbjct: 183 G--SKEQRERAVAVLNETRKRLY 203 >UniRef50_B9KC28 Transcriptional regulator, PadR family n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC28_THENN Length = 153 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 77/144 (53%), Gaps = 6/144 (4%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L+ ++L ++S++ SHGY ++K I + G PSPG +YP L L++Q I E E Sbjct: 8 KGHLKFLVLHVISQEPSHGYHIMKKISQI-MGAEPPSPGALYPVLSSLRKQRYIETHE-E 65 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G KK L+E+G ++L+E+ ++++ E + + + + + ++ +D + Sbjct: 66 GKKKIYRLSEKGRKFLKEHEKEIKEALEFAERFRMFSEICGS-SIRNVMDVIFKNVK--- 121 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 N S +++K+I ++ + I Sbjct: 122 NLSSDQKSKLKQITEEFEKKVYSI 145 >UniRef50_A5IKC3 Transcriptional regulator, PadR family n=5 Tax=Thermotogaceae RepID=A5IKC3_THEP1 Length = 150 Score = 109 bits (273), Expect = 5e-23, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 16/149 (10%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L+ ++L I+S+ SHGY ++K I + G PSPG +YP L L++Q I E Sbjct: 5 KGHLKFLVLHIISQQPSHGYYIMKKISQII-GAEPPSPGALYPILSSLRKQKYIETY-NE 62 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEE-----RIKARCVGAALRQNPQMKRALDNFKAV 174 G +K LT++G ++LEE++E+++ + R+ + G +LR + FK Sbjct: 63 GKRKVYRLTDKGRKYLEEHKEEIKKALDFAERFRVFSEICGLSLRNVVDVI-----FKNA 117 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 DL + ++K +R ++I Sbjct: 118 KDL----TPEQKKKLKHATEDFERNVYNI 142 >UniRef50_D1A5M7 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A5M7_THECD Length = 195 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 10/161 (6%) Query: 43 CGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP 102 GG HGR GRR + G +R +L +L+ HGYE+I+ +EN T G + PSPG +YP Sbjct: 37 WGGPHGRRHGRRMK---RGNVRAALLALLAERPMHGYEMIQELENRTSGAWRPSPGSVYP 93 Query: 103 TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 L L+++ L+T RE EGGK+ +LT+ G + + + + L Sbjct: 94 NLQMLEDEGLVTSRE-EGGKRLFSLTDTGRREAARH---GDAPWREFAEQPDEGVLHTRE 149 Query: 163 QMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 ++ R L+ + V+ S ++ ++IA R + I Sbjct: 150 EVGRLLNALQQVM---AAGSTEQRSRALELIADTRRKLYGI 187 >UniRef50_B2IKL6 Transcriptional regulator, PadR-like family n=2 Tax=Alphaproteobacteria RepID=B2IKL6_BEII9 Length = 209 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 26/204 (12%) Query: 27 EHEHCGHGHQHEHG-QCCGGRHGRGGG--------------RRQRFFGHGELRLVILDIL 71 EH H H H G HG G G R EL+LV+L +L Sbjct: 4 EHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLLALL 63 Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQG 131 + +HGYELI+ +E + G Y PSPG++YP L +L+E ++ + EG +K +LTE+G Sbjct: 64 AERPAHGYELIRMLEERSGGFYAPSPGMVYPALTYLEEIGHASVTQ-EGNRKLYSLTEEG 122 Query: 132 AQWLEENREQVEMIEERIK---------ARCVGAALRQNPQMKRALDNFKAVLDLRVNQS 182 Q L+ +RE+ + I E + +PQ L + + + + Sbjct: 123 RQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAADPQAADELHQARHAIKHALMRK 182 Query: 183 -DISDAQIKKIIAVIDRAAFDITQ 205 S A+ ++I ++ RA +I + Sbjct: 183 RGCSPAEARRIAGILQRATAEILE 206 >UniRef50_B5IFX4 Transcriptional regulator, PadR family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFX4_9EURY Length = 151 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 9/145 (6%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-REEEGG 121 L+LVILDIL + HGY + + I+ + + PS G+IYPTL L++ LI I E E Sbjct: 9 LKLVILDILRMSELHGYGISEKIDEIYRVG-KPSSGIIYPTLSSLKKSGLIRICAEGERD 67 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK ++T +G ++LEEN+E +E + +K ++ +K K N Sbjct: 68 KKIYSITPKGIEYLEENKENLEKAKTMLKNLGEFYSMGGKKLVKDIEKLIK-------NM 120 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 I + + K+I +I+R +I ++ Sbjct: 121 HKIGEDEKKRIAKIINRMHDEIEEI 145 >UniRef50_B0R6W2 Putative uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6W2_HALS3 Length = 176 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ G + ++L++L +GYE++K IE+L+ G++ PS G +YP L +E Sbjct: 1 MRKSGPPKGLVSYLVLELLDEQPRYGYEILKEIESLSGGHWEPSYGSVYPILYKFEENGY 60 Query: 113 IT--IREEEGGKKQIALTEQGAQWLEENREQVEMI 145 E+E +K LT+ G + L RE+V Sbjct: 61 AERLDVEDEPDRKYFELTDAGREELAAKREEVGTA 95 >UniRef50_Q2FNW6 Transcriptional regulator, PadR family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNW6_METHJ Length = 162 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (2%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ-IALTEQ 130 + GYEL+K I+ T + P+ G +YP L L+++ LI ++E K LTE Sbjct: 30 EKKPQSGYELLKEIDETTDSTWVPNKGTLYPLLKSLEQEGLIQVKEVGKRSKITFELTED 89 Query: 131 GAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIK 190 G Q L + + E E R+ L + + ++D+R D+ + + Sbjct: 90 GRQMLSTLKGKKEEAETRV---TFFKKLHREVFGEENFSFINFMMDVRFYVEDLPEEKKP 146 Query: 191 KIIAVIDRAAFDITQL 206 I ++ A +I L Sbjct: 147 AAIKILQTAFDEIKNL 162 >UniRef50_Q977Z7 Putative uncharacterized protein TVG1573729 n=2 Tax=Thermoplasma RepID=Q977Z7_THEVO Length = 155 Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GG G G R G +R IL IL+ + G +++ IENLT G + PSPG +Y Sbjct: 1 MFGGMRGPCGHHVDRSRGFVGIRYWILRILADGEKTGADIMTTIENLTMGRWRPSPGAVY 60 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLE 136 P L L+E+ I E + KK +L E+G + ++ Sbjct: 61 PILRALEEEGYIKGTERD-NKKYYSLLEKGKEMID 94 >UniRef50_A7HN08 Transcriptional regulator, PadR-like family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN08_FERNB Length = 124 Score = 105 bits (263), Expect = 7e-22, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 7/119 (5%) Query: 40 GQCCGGRHGRGGGR---RQRFFGHGE-LRLVILDILSRDDSHGYELIKAIENLTQGNYTP 95 + CG +HG+GG + F G+ L VIL +LS+ HGYEL + ++ + + Sbjct: 2 RRKCGCQHGQGGNIHRCEETGFSTGDFLTAVILKLLSQKPMHGYELYEKLQQVAYYPFKH 61 Query: 96 SPGVIYPTLDFLQEQSLITIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKA 151 P VIY L L+ +I + EEG +K ++T+ G ++L E + ++E + Sbjct: 62 DPSVIYNILRKLEHHGIIEFKVEEGNGGLRKVYSITDNGIKYLNNLLELINTLKESFEK 120 >UniRef50_D2PES9 Transcriptional regulator PadR family protein n=9 Tax=Sulfolobus RepID=D2PES9_SULIS Length = 131 Score = 105 bits (262), Expect = 9e-22, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 21/140 (15%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 L+ +IL +LS+ G +++ IE + G + PSPG +YP LD L+ + LI I + + Sbjct: 6 RRGLKWLILYVLSKGTMTGAQIMDEIEKTSYGMWRPSPGSVYPALDALESEGLIRISKVD 65 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD-LR 178 G KK LTE+G + + + + ++K A++ + + Sbjct: 66 GWKKYYELTEEGRKAI--------------------GVMSEEDKVKEAIEQLEFSARYIV 105 Query: 179 VNQSDISDAQIKKIIAVIDR 198 N ++D +K+ ++D Sbjct: 106 ENLEKLNDEDKRKVKNILDE 125 >UniRef50_Q47SG6 Transcriptional regulator, PadR family n=1 Tax=Thermobifida fusca YX RepID=Q47SG6_THEFY Length = 268 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 FGHG LRL +L +L HGYE+I + + G Y+PSPG IYP L L+E+ L+T Sbjct: 3 TIFGHGRLRLYLLKLLDESPRHGYEIISLLRDRFLGIYSPSPGTIYPRLARLEEEGLVT- 61 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVL 175 EE G+K LT++G L E +E +E +I A ++ + + + L Sbjct: 62 HEEVNGRKVYRLTDKGRAELRERERDLEDLERQITESVRDIAQAVQRDVRDTISHLREEL 121 Query: 176 DLRVNQSDISDAQIKKIIA 194 + S ++ ++ Sbjct: 122 KATAQHTRRSRSERQESAK 140 >UniRef50_A8LAZ7 Transcriptional regulator, PadR-like family n=9 Tax=Actinomycetales RepID=A8LAZ7_FRASN Length = 325 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 6/160 (3%) Query: 44 GGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPT 103 G G G GR R G++R +L +L+ + HGY++I + + + G + PSPG +YP Sbjct: 122 GFPPGPGFGRGARV-ARGDVREALLALLAEEPMHGYQMIGELASRSGGVWRPSPGSVYPV 180 Query: 104 LDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ 163 L L ++ L+ E + G++ LT+ G +E + E + Sbjct: 181 LSLLADEGLVRAEERD-GRRVFHLTDAGRAHVEARAGTAKPWETAAASADD----ETTAL 235 Query: 164 MKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 A AV+ + A + ++ R + I Sbjct: 236 RTLAFGVGAAVVQVAQAGDADQIAAARDLLTETRRGLYRI 275 >UniRef50_B2UHK8 Transcriptional regulator, PadR-like family n=5 Tax=Ralstonia RepID=B2UHK8_RALPJ Length = 219 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 23/148 (15%) Query: 75 DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQW 134 HGYELIKA+E + G YTPSPG++YP L +L++ ++ EG KK+ +T +G W Sbjct: 72 PRHGYELIKAVEEHSLGFYTPSPGMVYPALSYLEDHGFASVT-VEGNKKRYGITPEGETW 130 Query: 135 LEENREQVEMIEERIKARCVGAALRQNP-------------------QMKRALDNFKAVL 175 L E + + I +++A ++ A K L Sbjct: 131 LAERQHSADAILAQLRAMGERVKRMNEAMAFDRETDNAAEWTDTGHDPLRTARWRLKFAL 190 Query: 176 DLRVNQSDISDAQIKKIIAVIDRAAFDI 203 + + S + +++ ++ RA +I Sbjct: 191 ---MEKRFASREEQQRVADILLRALKEI 215 >UniRef50_A8MBR3 Transcriptional regulator, PadR-like family n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBR3_CALMQ Length = 144 Score = 102 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Query: 58 FGHGELRLVILDILS-RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G LR ++L IL+ + + G ++I IE + G + PSPG IYP LD L+E+ LI I Sbjct: 11 RRRGALRDIVLYILAFKGELTGAQIIDEIERWSFGFWRPSPGSIYPLLDDLEEEGLIKIS 70 Query: 117 EEEGGKKQIALTEQGAQ 133 +G KK +LTE+G + Sbjct: 71 RIDGVKKYYSLTEEGKR 87 >UniRef50_C7QBA1 Transcriptional regulator, PadR-like family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QBA1_CATAD Length = 277 Score = 102 bits (255), Expect = 7e-21, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 60/116 (51%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LRL +L +L+ HGYE+I+ ++ QG Y PS G +YP L L+ + LI Sbjct: 4 VFGHGRLRLYLLKLLAESPKHGYEIIQQLKERFQGLYAPSAGTVYPRLSRLESEGLIRHE 63 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 +E G+K +T+ G L + ++ +E I+ A ++K + + + Sbjct: 64 TDERGRKVYHITDAGRTELAARADDMDALETEIRESVSSLAEEIRDEVKESARHIQ 119 >UniRef50_Q465T5 Transcriptional regulator, PadR family n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q465T5_METBF Length = 155 Score = 102 bits (254), Expect = 9e-21, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 2/127 (1%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 L+ ++L I+ +HGY++IK +E + G + PS G IYP L+ L+ + I E Sbjct: 17 RAFLKYIVLKIIKEKPTHGYDIIKTVELRSNGRWIPSAGSIYPILEKLESKGFIQSEGIE 76 Query: 120 GGKKQIALTEQGAQWLEE-NREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 +K +T +G + L+ +E++E++ E + N + + N V Sbjct: 77 R-RKVYTITPKGVKGLDRMTQEKLELLNEMSRIVNNVIEGNDNSDAEGKIGNAHDVRQKS 135 Query: 179 VNQSDIS 185 D Sbjct: 136 ETAHDCD 142 >UniRef50_A6W6T2 Transcriptional regulator, PadR-like family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W6T2_KINRD Length = 219 Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 5/145 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ S+GY +I + + G + PSPG +YPTL LQ++ L+T + Sbjct: 69 DVRAAVLVLLAEGPSNGYRIIGEVTRRSDGEWKPSPGSVYPTLQQLQDEGLVTA--DPAD 126 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KQ LTE+G + +E + E + G ++ Q+++ + + V Sbjct: 127 PKQFTLTEEGRRHVEAEYSRTPPPWEDLGG-GGGDHRERSHQLRKQIASIAMTYQQIVVS 185 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 D + + V+++A ++ + Sbjct: 186 GRPGD--LDRAGDVLEKARRELLAI 208 >UniRef50_Q97A48 Putative uncharacterized protein TVG0986825 n=1 Tax=Thermoplasma volcanium RepID=Q97A48_THEVO Length = 151 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 19/147 (12%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L+ IL ++S +G E++ IE + G + PSPG +YP L+ L+ L+ E Sbjct: 11 RGNLKYWILYLVSTKPMNGAEVMDEIERHSFGMWRPSPGSVYPALEQLEADGLVI--RNE 68 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G+ A TEQG + L R + +D ++++ Sbjct: 69 DGR--YAATEQGKEEL---------------GITSAEFSRSPKTVSGIVDEIESMVMYLS 111 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 + + K + ++ I +L Sbjct: 112 DVMPVQPEDSKLNVTRLENVVSKINEL 138 >UniRef50_C1YU51 Predicted transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YU51_NOCDA Length = 395 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 FGHG LRL +L +L + HGYE+I + + G Y+PSPG IYP L L+E+ L+T Sbjct: 2 STIFGHGRLRLYLLKLLDENPRHGYEIISLLRDRFLGVYSPSPGTIYPRLARLEEEGLVT 61 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 EEGG+K +LT++G + L E + +E I A ++ + + + Sbjct: 62 -HTEEGGRKVYSLTDKGREELRERENDLNDLEREITDSVRDIARAVKQDVRATISSLRDE 120 Query: 175 LD 176 L Sbjct: 121 LK 122 >UniRef50_D1ACF2 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACF2_THECD Length = 238 Score = 100 bits (250), Expect = 3e-20, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 1/135 (0%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LRL +L +L HGYE+I+ +++ G Y+PSPG IYP L L+ L+T Sbjct: 4 VFGHGRLRLYLLKLLEESPRHGYEVIRLLQDRFLGVYSPSPGTIYPRLARLEADGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 E GKK +LT+ G LE +++ +EE I A A +++ + + + L Sbjct: 63 EVIKGKKVYSLTDAGRAELERRMDELADLEEEIAASAQQFARELQQDVRQTVRSLREELT 122 Query: 177 LRVNQSDISDAQIKK 191 + K Sbjct: 123 QAAREMRKQGRTASK 137 >UniRef50_B1L3Y8 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Y8_KORCO Length = 149 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 10/147 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G RL++LD + + HGYE+++ I + + PSPGV+YPTL L+ + L+ E Sbjct: 8 KGLFRLLVLDAIREEPLHGYEIMRRIGDTLG--HPPSPGVVYPTLRSLESEGLVRSG-RE 64 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G + ++TE G ++L+EN +++ ER + + + D F + +L Sbjct: 65 GRRTVYSITEDGVKYLKENEDRIRCFMERADRIKILKKMVPH-------DIFPLLEELAS 117 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 +++ Q ++ R D++++ Sbjct: 118 KYGRMTEEQRDEVRRAFWRLIQDLSRI 144 >UniRef50_D1SPJ9 Transcriptional regulator, PadR-like family n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SPJ9_9EURY Length = 151 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 6/132 (4%) Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-REEEGGKKQIALTEQG 131 +++ HGY L++ ++ + Y PS GVIYPTL L+ I + + E+G KK +T++G Sbjct: 20 KEELHGYALMQKLKGIFV-YYKPSSGVIYPTLQSLRRSGYIEVVKAEDGDKKLYRITDKG 78 Query: 132 AQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKK 191 ++L+EN E+++ I I+A L K ++ K V+ N +D ++KK Sbjct: 79 REYLKENEEKLKKIFSHIEAVRGFHELGG----KELKESIKLVIKNFQNLNDKQKEELKK 134 Query: 192 IIAVIDRAAFDI 203 I+ R I Sbjct: 135 ILKETSRKINLI 146 >UniRef50_D2EEC8 Transcriptional regulator, PadR family n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEC8_9EURY Length = 172 Score = 100 bits (248), Expect = 4e-20, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 67/151 (44%), Gaps = 11/151 (7%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R FG ++ IL ++S++ G ++I I ++ G + PSPG IY L +L E + Sbjct: 33 SRGFG---IKYWILMLVSKEKMTGAQMIDKIYEMSFGFWRPSPGSIYSILKYLSESGFVK 89 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + E++ KK ++T++G ++L + ++ + + ++ + Sbjct: 90 V-EQKDNKKYYSITDRGKEYL-------DSSWFPWRSASSFMNKDEGTSIDETIETIDNL 141 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + + + + KKI+ ID I + Sbjct: 142 SEFISEKGKLLSKENKKILKKIDDRLHSILK 172 >UniRef50_A9A325 Transcriptional regulator, PadR-like family n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A325_NITMS Length = 169 Score = 99.3 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 12/159 (7%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R G R IL++L + + G E+I + G + PSPG+IYP L L ++ L Sbjct: 8 RVGSSVPRGFSRYFILELLKKKEQTGKEIIDYAVEQSNGIWKPSPGLIYPLLGRLLDEGL 67 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 I +E + GK LTE+G E + V+ + + +K + N A+D + Sbjct: 68 I--QETKDGK--YQLTEKG----AETAQDVDKVNDIVKKQLDVLFRLGNVGRFVAMDLLE 119 Query: 173 AV----LDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 + L N ++++ + +K + I D Sbjct: 120 KISSMGAILSSNVANMTTEETEKYRKFLQEELKKIDAKD 158 >UniRef50_Q2FP38 Transcriptional regulator, PadR family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FP38_METHJ Length = 159 Score = 99.3 bits (246), Expect = 8e-20, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 22/161 (13%) Query: 47 HGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDF 106 R R F G+G L+L++L ILS +G EL+ I+ ++ G++ PSPG IYP L Sbjct: 11 FMRKFHRLGHFRGYGGLKLLVLYILSEGPKNGAELMDTIDMMSHGHWKPSPGSIYPLLSK 70 Query: 107 LQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKR 166 + +LI R + ++ LT+ G + + + + ++ Sbjct: 71 AVDDNLIVKRVD----RKYELTDAGFEEI---------------SMFKAEGWDKAGSIES 111 Query: 167 ALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 L + L D+++ ++ + +++R I +++ Sbjct: 112 ILTEIDSNLS---YLEDLAEEKLAPYVRILERIGVKINRIN 149 >UniRef50_A0RKG2 Transcriptional regulator, PadR family n=50 Tax=Firmicutes RepID=A0RKG2_BACAH Length = 188 Score = 98.9 bits (245), Expect = 8e-20, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%) Query: 46 RHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLD 105 H + + G + +++L I+ + D++GYE+I+ ++ + YT S G +YP L Sbjct: 72 HHKVVNHKMDKEILKGSIDILLLSIIKQRDTYGYEIIQKLKENSNDLYTMSQGTLYPALK 131 Query: 106 FLQEQSLITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 L+++ LI E +K +T G + LEE + + IK GA Sbjct: 132 RLEQKDLIHSYWGESETGMKRKFYRITTSGKKMLEEKLTAWDSVTALIKTCQKGA 186 >UniRef50_A4WJU8 Transcriptional regulator, PadR family n=4 Tax=Thermoproteaceae RepID=A4WJU8_PYRAR Length = 144 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 4/76 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G LR V+L +LS +G E+I+A+E T G + PSPG +YP L L+ + L+ R Sbjct: 8 FLGRRGLREVVLWLLSDKPMNGAEIIRAVEEFTWGFWRPSPGSVYPLLRQLEAEGLVRRR 67 Query: 117 EEEGGKKQIALTEQGA 132 ++ G+ LTE G Sbjct: 68 QD--GR--YELTEAGR 79 >UniRef50_A0RYA5 Transcriptional regulator n=3 Tax=Thaumarchaeota RepID=A0RYA5_CENSY Length = 268 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 12/142 (8%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R G R IL++L G E+I ++G++ PSPG+IYP L L ++ + Sbjct: 108 RVGSSIPRGFSRYFILEVLQESPCTGKEIIDHATRKSEGDWKPSPGLIYPLLGRLLDEGM 167 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 + EE GG K +TE+G + V I E ++ + A N A+D + Sbjct: 168 V---EETGGGK-YGITEKGKA----TAQDVGKIHEAVRKQLDVLARVGNAGRFVAMDLLE 219 Query: 173 AV----LDLRVNQSDISDAQIK 190 + L N S+++D +++ Sbjct: 220 RITVMGTMLSANASNMTDQEVR 241 >UniRef50_D0LFT7 Transcriptional regulator, PadR-like family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LFT7_HALO1 Length = 107 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 R ++L L+ + HGYE+ + +E + G +T S G +YP L L+++ L++ E G Sbjct: 10 RFMVLLALAHEPKHGYEIARYLEERSGGYFTMSYGALYPVLHRLEKEKLVSATWCEAGGT 69 Query: 122 --KKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 KK LT +G L E RE + + G Sbjct: 70 RKKKVYTLTAKGQAALREEREDFDAFSLAFRKLLGG 105 >UniRef50_A4YF39 Transcriptional regulator, PadR family n=2 Tax=Sulfolobaceae RepID=A4YF39_METS5 Length = 131 Score = 97.4 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G+ QR G L L +LD S+ + G ++++ IE +TQG + PSPG +YP LD ++ + Sbjct: 2 FGQWQRKRGLANLILTLLD--SKGEMTGAQIMREIEKVTQGIWRPSPGAVYPALDKMESE 59 Query: 111 SLITIREEEGGKKQIALTEQGAQWLE 136 LIT+ + E ++ A+TE+G + L Sbjct: 60 GLITVSKVERSQRYYAITEKGKRLLS 85 >UniRef50_Q6KZ78 Transcriptional regulator n=1 Tax=Picrophilus torridus RepID=Q6KZ78_PICTO Length = 144 Score = 97.4 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 41 QCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI 100 RH R R FG L+ IL I S + G ++ I T G++ PSPG+I Sbjct: 2 FGPRARHYFHNAMRMRGFG---LKYAILSIASDKEVTGADIANIIGERTNGHWVPSPGII 58 Query: 101 YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEE 137 YPTL L E + +RE E GKK +E+G + E Sbjct: 59 YPTLKTLYEDGYLNMRE-ENGKKYYRTSEKGRSLINE 94 >UniRef50_D1X4A7 Transcriptional regulator, PadR-like family n=8 Tax=Streptomyces RepID=D1X4A7_9ACTO Length = 349 Score = 97.0 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 1/126 (0%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LRL +L +L HGYE+I+ +E QG Y PS G +YP L L+ + L+T Sbjct: 4 VFAHGRLRLYLLKLLDEAPRHGYEVIRLLEERFQGLYAPSAGTVYPRLAKLEAEGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 EGG+K ++T+ G + L ++ +E I+ A ++ A ++ + Sbjct: 63 ATEGGRKVYSITDAGREELAGRGGELADLELEIRDSVSELAAEIRDDVRGAAGRLRSDMR 122 Query: 177 LRVNQS 182 ++S Sbjct: 123 AAASES 128 >UniRef50_D2AYZ8 Transcriptional regulator protein-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2AYZ8_STRRD Length = 243 Score = 96.6 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 1/124 (0%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FGHG LRL +L +L HGYE+I+ +++ G Y+PSPG IYP L L+E+ L+T Sbjct: 4 VFGHGRLRLYLLKLLEESPRHGYEVIRLLQDRFLGVYSPSPGTIYPRLARLEEEGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 E GKK +T++G L +++ +E+ I A ++ + + + L Sbjct: 63 EVLDGKKVFTITDRGRDELNTRLDELADLEQEISDSVRDIAREVKEDVRDTVKSLREELT 122 Query: 177 LRVN 180 Sbjct: 123 QMAR 126 >UniRef50_A4WHQ6 Transcriptional regulator, PadR family n=5 Tax=Thermoproteaceae RepID=A4WHQ6_PYRAR Length = 159 Score = 96.2 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 6/150 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G + ++L L GYEL+K + L+ G YTPSPG +YP L +L+ + LI RE Sbjct: 4 RRRGIFKGIVLYFLKSRPLSGYELLKELNRLSSGRYTPSPGTLYPLLSYLEAEGLIESRE 63 Query: 118 EEGGK---KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 G+ K ALT QG ++L E E E +K G A M D + Sbjct: 64 AYVGRRRKKIYALTPQGEEYLARLMED-EEFLELLKTLESGRAGGD--LMTAIRDELAYI 120 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 ++ + +++++ ++ R + Sbjct: 121 DEVFDEVENGDVEVLREMLDLLRRLEEKVE 150 >UniRef50_B9LRB4 Transcriptional regulator, PadR-like family n=4 Tax=Halobacteriaceae RepID=B9LRB4_HALLT Length = 210 Score = 96.2 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 7/118 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ G + ++L++L+ +GYEL+ I ++ G++ PS G +YP L +E+ + Sbjct: 1 MRKSGPPKGLISYLVLELLAERPRYGYELLGDITEISGGHWEPSYGSVYPILYKFEEEGV 60 Query: 113 IT--IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRAL 168 R +E +K ALT+ G + L E R ++ +A+ G + + AL Sbjct: 61 AERVERADEPDRKYFALTDAGREELVEKRREIGA-----EAKEFGDVVLGFYHLYAAL 113 >UniRef50_Q9YC94 Putative transcriptional regulator, PadR family n=1 Tax=Aeropyrum pernix RepID=Q9YC94_AERPE Length = 173 Score = 96.2 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 18/135 (13%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 LR ++L +L+ HGYE++ IE +T G + P+PG +YP LD L+ + LI + + Sbjct: 17 RESLRQLVLRVLAERPYHGYEIMNRIEEITNGVWRPAPGTLYPLLDQLKREGLIRVERMD 76 Query: 120 -----GGKK-QIALTEQGAQWLE----ENREQVEMIEERIKARC--------VGAALRQN 161 GG++ ALTE G + L E +V+ + I C G A R Sbjct: 77 RKGVKGGRRIVYALTEDGWRRLADIMFEKARKVDYLIYYIIEGCRILRENGFEGEAARVC 136 Query: 162 PQMKRALDNFKAVLD 176 + ++A++ F+ L+ Sbjct: 137 AEARKAVEKFEEALE 151 >UniRef50_Q7NV79 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NV79_CHRVO Length = 207 Score = 96.2 bits (238), Expect = 7e-19, Method: Composition-based stats. Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 24/174 (13%) Query: 45 GRHGRGGGR----RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI 100 G RGG R R FG +L+L++L ++S HGYELIK + + + G Y+PSPGVI Sbjct: 19 GPRRRGGEDEALARGRKFGADDLQLLLLALISEKSCHGYELIKELASRSNGYYSPSPGVI 78 Query: 101 YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI----------- 149 YP L L+E +T+ G +K +L + G + L +RE VE+ ++ Sbjct: 79 YPALVHLEEAGQVTV-ASHGKRKCYSLADAGRERLAIHREHVELTLAKLVHIGRKMELAR 137 Query: 150 -----KARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDR 198 + A ++ A K L LR + ++I A++ R Sbjct: 138 RAYAGEEIGEDGAAGWTRELIEARRALKHALLLR---DQAGPDEQRRIAAILQR 188 >UniRef50_Q0W129 Predicted transcription regulator (PadR-like family) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W129_UNCMA Length = 171 Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 7/148 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L +L +L HGY L++ IE T G++ PS IY L+ L+ IT EE+ G Sbjct: 17 LNYFVLMLLRNSPKHGYMLMQDIERHTGGHWRPSHSAIYKLLNRLEADGYITSWEEKDGE 76 Query: 122 --KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 ++ ++E G + LEE+ E + + A + L + + Sbjct: 77 RARRVYKISETGKKLLEESERDFESFINAFISSLLEAERVNPDHLTVLLTKKGKAMMNAL 136 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQLD 207 + D ++K ++ + +I +++ Sbjct: 137 D----PDQRLKALMKLKTFLDTEIVRVN 160 >UniRef50_C4RQF7 PadR-family transcriptional regulator n=2 Tax=Micromonospora RepID=C4RQF7_9ACTO Length = 207 Score = 95.1 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 4/123 (3%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LRL +L +L HGYELI+ +E+ G Y PS G IYP L L+ + +T Sbjct: 4 VFSHGRLRLYLLKLLDDGPKHGYELIRLLEDRFLGLYAPSAGTIYPRLQRLEAEGRVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIK---ARCVGAALRQNPQMKRALDNFKA 173 GG+K +TE G L + ++ +E I A A +++ ++ + K Sbjct: 63 TAAGGRKVYEITEAGQAELRQRAGELATLESDINSSVADLSTLAGEIRSEVRGSVRDLKR 122 Query: 174 VLD 176 L Sbjct: 123 ELR 125 >UniRef50_C5AKR8 Putative uncharacterized protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AKR8_BURGB Length = 273 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 55/210 (26%) Query: 4 HHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGG----------- 52 HH+G G P EG + +H GH H+H G H G Sbjct: 5 HHQGIFGAGGTPGREG----RREQHGDAGHRQHHDHHGRGPGHHPDHHGLFRLWGMAGGR 60 Query: 53 ----------------------------------RRQRFFGHGELRLVILDILSRDDSHG 78 R R F +L+L++L +L+ SHG Sbjct: 61 RGGGRHGHGFGGFPEGFGGPGGMGGPGGFDDPRMPRGRQFTSDDLQLMLLSLLAEQPSHG 120 Query: 79 YELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEEN 138 YELIKA++ +QG Y PSPG++YP L +L+E + +T+ E EG +K+ AL E G L+ Sbjct: 121 YELIKALDTRSQGFYVPSPGMVYPALTYLEELAYVTV-EAEGNRKRYALAEAGRAHLDAQ 179 Query: 139 REQVEMIEERIKARCVGAALRQNPQMKRAL 168 RE+VE++ ++ R+ M+RA+ Sbjct: 180 RERVELLFAKL-----AHLGRKMEFMRRAI 204 >UniRef50_A9WPK9 Transcriptional regulator, PadR family protein n=5 Tax=Micrococcineae RepID=A9WPK9_RENSM Length = 212 Score = 93.9 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LRL +L +L HGY++I+A+ + G Y+PS G +YP L L+E+ L+ Sbjct: 4 VFAHGALRLYLLALLEEGPKHGYDVIRALSDRFGGTYSPSAGTVYPRLAKLEEEGLVGTT 63 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 + +T+ G L+ R+++ +E+ I A A ++ + + Sbjct: 64 TDGRRT-TYNITDSGRAELDRRRDELNEVEQDISASVRRLADTLRQDIRTNMKGLR 118 >UniRef50_Q2RGC9 Transcriptional regulator, PadR family n=3 Tax=Bacteria RepID=Q2RGC9_MOOTA Length = 372 Score = 93.1 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 + IL +L HGYE+ + + +T+G TP+ G IYP L +E +T E G Sbjct: 19 KFFILRVLYTQPMHGYEIARTVAQVTRGCCTPTEGTIYPVLREFEEGGYVTSSLEIAGGR 78 Query: 122 -KKQIALTEQGAQ----WLEENREQVEMIEERIKARCVGAALRQ 160 +K LT +G + +E +E I E +K + R+ Sbjct: 79 ERKVYTLTPKGQEAFRVAVEAWKEVTGYILEAVKLEDYASTRRR 122 >UniRef50_D1XDB7 Transcriptional regulator, PadR-like family n=8 Tax=Streptomyces RepID=D1XDB7_9ACTO Length = 335 Score = 92.7 bits (229), Expect = 6e-18, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 1/121 (0%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F HG LRL +L +L HGYE+I+ +E QG Y PS G +YP L L+ + L+T Sbjct: 4 VFAHGRLRLYLLKLLDEAPRHGYEVIRLLEERFQGLYAPSAGTVYPRLAKLEAEGLVT-H 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 EGG+K ++T+ G L ++ +E I A ++ A ++ + Sbjct: 63 ATEGGRKVYSITDAGRDELAGRGGELADLELEIHESVSELAAEIRDDVRGAAGKLRSEMR 122 Query: 177 L 177 Sbjct: 123 A 123 >UniRef50_A1RWE5 Transcriptional regulator, PadR family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWE5_THEPD Length = 118 Score = 92.4 bits (228), Expect = 8e-18, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 +R++ + ++L L +L+ + HGYEL++ +E + + PS IYP L L+ L Sbjct: 11 KREKIRVNTVIKLYTLILLAEGEKHGYELMRTLEQMIEAPIGPSQ--IYPFLRNLENAGL 68 Query: 113 ITIREE-EGGKKQIALTEQGAQWLEENREQ 141 +T RE KK +LT QG ++L+E E+ Sbjct: 69 VTSREAGSRDKKVYSLTPQGYEFLKEILEK 98 >UniRef50_C8VZL9 Transcriptional regulator, PadR-like family n=2 Tax=Firmicutes RepID=C8VZL9_DESAS Length = 114 Score = 92.4 bits (228), Expect = 9e-18, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 4/97 (4%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI----REEEG 120 +++L +L R+ +GY++IK IEN + G + G +YP L L+ +I E Sbjct: 14 ILVLSLLDREPMYGYQMIKEIENKSSGVFKFKEGTLYPILHSLEADGMINANWWGNEGSR 73 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 +K +T++G +L++ +++ + A Sbjct: 74 QRKYYQITKKGNLYLKDKQQEWVTFRSAVDKFLTREA 110 >UniRef50_A1S018 Transcriptional regulator, PadR family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1S018_THEPD Length = 141 Score = 92.0 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 25/152 (16%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F LR+++L +L + G E+I+ IE +T G + PSPG +YPTL L+E+ L+ RE Sbjct: 4 FARNPLRIMVLSLLRKRPMSGVEIIEEIEEITLGFWRPSPGAVYPTLRALEEEGLVR-RE 62 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK---AV 174 EEG +K LTE+G LE+ Q + AL + Sbjct: 63 EEGWRKVYYLTEKGRMELEKL-----------------GLASQPAGIDDALCILEGYVEY 105 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 L ++ +SD Q+ +I +R A D+ +L Sbjct: 106 LREVASRDGLSDEQVSRI----ERIAEDLRRL 133 >UniRef50_B2A0I7 Transcriptional regulator, PadR-like family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0I7_NATTJ Length = 121 Score = 92.0 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 ++ ++L L + SHGY ++ ++ TQG TP+ G +YP L L E+ ++ E Sbjct: 18 IKFLVLRTLKTNPSHGYGILNQVKEFTQGCCTPTYGSVYPILKELCEEGYAEVKFETVNN 77 Query: 122 --KKQIALTEQGAQWLEENREQVEMIE 146 +K LTEQG Q + +E + I Sbjct: 78 RERKVYYLTEQGEQAYLQAKEAWQDIL 104 >UniRef50_A7IME8 Transcriptional regulator, PadR-like family n=2 Tax=Alphaproteobacteria RepID=A7IME8_XANP2 Length = 152 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 + IL +L + HGY++ +A+E T G +P+ G IYP L +E +T E Sbjct: 42 KFFILCVLHQRPMHGYDVARAVEATTNGCCSPAEGTIYPVLREFEEGGYVTAASEVVSGR 101 Query: 122 -KKQIALTEQGAQ 133 +K LT++G Sbjct: 102 ERKVYTLTDKGRA 114 >UniRef50_A6URE9 Transcriptional regulator, PadR-like family n=1 Tax=Methanococcus vannielii SB RepID=A6URE9_METVS Length = 131 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 6/113 (5%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE-GG 121 ++++I+ L ++ HGY LI + + + S +IYP L L+ + LI I + + G Sbjct: 11 VKILIMHDLEKEPLHGYSLISKLGDKLG--ISMSASMIYPILSSLKTKGLIEIEKTDVRG 68 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARC---VGAALRQNPQMKRALDNF 171 KK LTE G+++L EN E+VE ++ A L + A+ F Sbjct: 69 KKVYRLTENGSKFLYENSEKVEYALKKSDALFHFHFNGGLELKNALHTAIKEF 121 >UniRef50_D1YZ73 PadR-like family transcriptional regulator n=2 Tax=Methanocella paludicola SANAE RepID=D1YZ73_METPS Length = 175 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 3/109 (2%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 L +L +L + HGY L++ IE TQG++ PS IY L+ L+ IT EE Sbjct: 13 SRASLNYFVLMLLRTNPKHGYMLMQDIERHTQGHWRPSHSAIYKLLNRLETDGYITSWEE 72 Query: 119 EGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQM 164 + G ++ ++++G LE + E + + A + Sbjct: 73 KDGERVRRVYQISKEGVALLEASDRDFESFINAFISSLLEAERVNPDHL 121 >UniRef50_C3N9F3 Transcriptional regulator, PadR-like family n=11 Tax=Sulfolobus RepID=C3N9F3_SULIY Length = 153 Score = 89.7 bits (221), Expect = 5e-17, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G LRL+ L +L + G ++I I ++ G + PSPG IYP L+ + E+ TI Sbjct: 24 VRQKGRLRLMTLWLLWQSPKRGIDIIDDINKMSWGFWKPSPGSIYPLLNKMVEEG--TIE 81 Query: 117 EEEGGKKQIALTEQGAQWLEENRE--QVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 GK +T +G + ++E Q+ IE+ I+ A + + + + + + Sbjct: 82 RTSDGK--YKITVKGIEEIKEILPIKQINSIEDSIQELEGLAQFFKEVEKNKLFEYKERI 139 Query: 175 LDL 177 L+ Sbjct: 140 LNA 142 >UniRef50_Q9RT15 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RT15_DEIRA Length = 107 Score = 89.3 bits (220), Expect = 7e-17, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L L++L IL R +G+ +I+ ++ T G + G +YP L L+ L+ + E Sbjct: 7 RGNLDLILLSILERRPLYGFAIIQEAKDRTDGYFEFKEGSLYPALHRLEVDGLLAAQFGE 66 Query: 120 GG-----KKQIALTEQGAQWLEENREQVEMI 145 G +K A+T+ G Q L + RE+ + Sbjct: 67 AGRNGKPRKYYAITDLGRQRLAQKREEFQTF 97 >UniRef50_A6BF93 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF93_9FIRM Length = 109 Score = 87.7 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G ++IL ++S D +GYE+I + + + G +YP L + + + +E Sbjct: 10 GNTAMLILKLISEKDMYGYEMIDTLSKRSDNVFELKVGTLYPLLHSMVQSGYLESYNQEA 69 Query: 121 G---KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K +T G ++LE+ E+ + + Sbjct: 70 NGKLRKYYRITPNGKKYLEKMIEEWNAYANAVTS 103 >UniRef50_UPI0001C35727 PadR-like family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35727 Length = 158 Score = 87.0 bits (214), Expect = 3e-16, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 3/86 (3%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G +++L +L+ D +GYE+I+ + + + G +YP L L+++ +T EEE Sbjct: 10 GSTSMLLLKLLTEKDMYGYEMIETLRKKSNDVFELKAGTLYPLLHSLEQKGYLTSYEEEA 69 Query: 121 G---KKQIALTEQGAQWLEENREQVE 143 +K ++T +G ++L+ E+ + Sbjct: 70 SGKVRKYYSITGEGKRYLKGKEEEWK 95 >UniRef50_C0H3S6 Putative DNA-binding protein ywzG n=5 Tax=Bacillaceae RepID=YWZG_BACSU Length = 112 Score = 86.6 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R G +++L +L+ +GYEL+K + + + G +YP+L L+ Q I+ Sbjct: 4 RELVKGSTVILVLTLLNERPMYGYELVKEMGSRSGNELQMKEGTLYPSLHKLERQGYISS 63 Query: 116 REEE----GGKKQIALTEQGAQWLEENREQVEMIEERI 149 E+ +K +T++G + L E ++ + + Sbjct: 64 YWEKQEKGPDRKYYRITDEGKEVLAERTKEWSVFSAMM 101 >UniRef50_C5A2S9 Transcription regulator, PadR-like family n=4 Tax=Thermococcus RepID=C5A2S9_THEGJ Length = 160 Score = 86.6 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 11/145 (7%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK- 123 L++L I + ++HGYE++K IE +T GN+ PS G +Y L+ L ++ L+ REE GK+ Sbjct: 18 LILLIIGLKGETHGYEILKEIERITFGNWKPSHGNLYTMLNKLADEGLVESREEYRGKRR 77 Query: 124 --QIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 + LTE+G +L E ++ + + + + +M + K + + Sbjct: 78 VIRYRLTEKGWLYLRE-ANELTLKSLYLAIQYHERLREKLREMGYGRELAKEAVGEYLKL 136 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + II ++ + + + Sbjct: 137 -------LDGIIEILQKKREQLRDM 154 >UniRef50_A8LCR1 Transcriptional regulator, PadR-like family n=12 Tax=Actinomycetales RepID=A8LCR1_FRASN Length = 130 Score = 85.4 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE----EGG 121 ++L IL+ ++S+GY ++K I L+ G + G++YP L L+ + E Sbjct: 15 IVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLGHVESSWRSATGERR 74 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRAL 168 +K +T+ G L E R Q + + + +K G R A+ Sbjct: 75 RKYYRITDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPAI 121 >UniRef50_D1A757 Transcriptional regulator, PadR-like family n=2 Tax=Streptosporangineae RepID=D1A757_THECD Length = 116 Score = 85.0 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 3/106 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L ++L +L + HGY +I+A+ + G G +YP L L+ +T Sbjct: 10 RGHLDALLLSVLEHEPLHGYAIIEALSERSGGALNVPTGTVYPALRRLERTGEVTSEWAT 69 Query: 120 GG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 G ++ LT G + LE R I + Sbjct: 70 VGGRRRRTYRLTPAGRRRLEGERTAWRAFAAAIGSVLEPRVRPSQA 115 >UniRef50_B9XHE1 Transcriptional regulator, PadR-like family n=2 Tax=bacterium Ellin514 RepID=B9XHE1_9BACT Length = 112 Score = 84.7 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 4/88 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---- 121 +IL ILS D +GY LI+ ++ L+ G S G++YP L +++++ LI EG Sbjct: 14 LILSILSEGDCYGYALIQRVQELSDGEILWSEGMLYPVLHWMEKEKLIESEWREGDLGRK 73 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERI 149 +K L + G + L++ ++Q + + Sbjct: 74 RKYYRLCKAGTKALQQEQKQWMTVHSTL 101 >UniRef50_C6A0Y4 Transcription regulator, PadR-like family n=7 Tax=Thermococcaceae RepID=C6A0Y4_THESM Length = 158 Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 75 DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR-EEEGGKKQIALTEQGAQ 133 HGY ++ +E G TPSPG IYP L L+ LI + + + KK +T++G + Sbjct: 29 PQHGYGIMYELETR-YGIPTPSPGAIYPILSGLKRNGLIRVAGKGKREKKLYQITDRGKE 87 Query: 134 WLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKII 193 +L+E++ ++ + I++ +L N ++K A+ + +++ Q K + Sbjct: 88 YLDEHKNELFEVIRMIESFKEFRSLGGN-ELKEAIKEVFMAI------PSLTEEQKKALS 140 Query: 194 AVIDRAAFDIT 204 I+ I Sbjct: 141 DEIEEFTRKIR 151 >UniRef50_A6TRI8 Transcriptional regulator, PadR-like family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRI8_ALKMQ Length = 125 Score = 83.9 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 8/104 (7%) Query: 52 GRRQRFFGHG-----ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDF 106 G R R F ++L IL +L+ +G E+I I+ + PSPG+IYP L Sbjct: 6 GERSRQFPSKLSTTQFVKLYILHLLNERSFYGNEIIDEIKVRLSHVWVPSPGMIYPLLRD 65 Query: 107 LQEQSLITIREEEGGK---KQIALTEQGAQWLEENREQVEMIEE 147 L+ I+ EE K + +T++G + + + + E Sbjct: 66 LESNDYISGWWEEPDKRSIRYYRITDEGIEHYKVIKRTYKASLE 109 >UniRef50_C7DGB3 Transcriptional regulator, PadR-like family n=2 Tax=unclassified Euryarchaeota RepID=C7DGB3_9EURY Length = 121 Score = 83.5 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG----KKQIAL 127 S HG+EL++ I T G + P P IYP L++L+ I +E +KQ ++ Sbjct: 30 SERPMHGFELMEQIFERTGGMWRPGPAAIYPALEWLESNGYIKSDSQENRPEKTRKQYSI 89 Query: 128 TEQGAQWLEENREQVEMIEERIKA 151 T++G L + + + I +R+ Sbjct: 90 TKKGTTALSDYEKSAKEIRKRMME 113 >UniRef50_C5CG93 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CG93_KOSOT Length = 170 Score = 83.1 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%) Query: 58 FGHGELRLVILDILSRD-DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G LR +L I+ + HGY +++ IE + PSPG IYP L+ L LI Sbjct: 1 MNKGFLRFAVLGIVVKKYPVHGYRIMELIEEKMG--FKPSPGSIYPVLNKLVSDGLIY-S 57 Query: 117 EEEGGKKQIALTEQGA---QWLEENREQVEMIEERIKARCVGAALRQNPQMK 165 E G +K TE+G + LE R ++ + ++ + Sbjct: 58 ETSGKRKLYYPTEKGKKIHEELESQRAELVNSHRKFAESLARLVGVKSKDIF 109 >UniRef50_C8WGP1 Transcriptional regulator, PadR-like family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP1_EGGLE Length = 113 Score = 83.1 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR--- 116 G L +++L +L ++ +GY+LI + + + G G +YP L L++ L+T R Sbjct: 11 KGALDMLVLKLLQHEEKYGYQLISELRDRSNGALALKEGTLYPILYRLEDGGLVTSRMSA 70 Query: 117 --EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA 151 +E +K A+TE G L E E + +++ Sbjct: 71 HVAKEPARKYYAITEAGRDALREMYEIWNEFDGHVRS 107 >UniRef50_A4YGH7 Transcriptional regulator, PadR family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YGH7_METS5 Length = 151 Score = 82.7 bits (203), Expect = 7e-15, Method: Composition-based stats. Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 11/87 (12%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 G G RR LR VIL L+ +G E++K IE++T+G + PSPG +Y Sbjct: 1 MFHHGFGHRGHRRG-------LRFVILFSLNESPKNGIEIMKEIESMTKGWWRPSPGSLY 53 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALT 128 P L + ++ I R E GK LT Sbjct: 54 PMLAKMSQEGFI--RRREDGK--YELT 76 >UniRef50_Q9RVI7 Pex-related protein n=1 Tax=Deinococcus radiodurans RepID=Q9RVI7_DEIRA Length = 131 Score = 82.7 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT--I 115 G + LVIL + +G EL++ I + G + S G +YP L L + I Sbjct: 25 LKSGTVDLVILAAVGEQPRYGLELVQHINARSGGLFELSEGSLYPALLRLSKADWIVGDW 84 Query: 116 REEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 + GG +K LT+ GA+ LE + + ++ + A A Sbjct: 85 QPTPGGGSPRKVYTLTDSGAKELERRKGEWSRLQSAVNALLWRGAP 130 >UniRef50_A3DGN6 Transcriptional regulator, PadR family n=4 Tax=Clostridiales RepID=A3DGN6_CLOTH Length = 115 Score = 82.3 bits (202), Expect = 8e-15, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G +++L +L D +GY++I+ + + + G +YP L L+ + Sbjct: 4 DKSLMAGSTTILVLKLLEERDMYGYQMIETLAQRSDDTFNLKAGTLYPILHNLRNNGYVE 63 Query: 115 IREEEGG----KKQIALTEQGAQWLEENREQV 142 E+E +K LT +G + L E +++ Sbjct: 64 SYEKEESNGKIRKYYYLTSKGKKLLREKQKEW 95 >UniRef50_A7I725 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I725_METB6 Length = 166 Score = 82.3 bits (202), Expect = 8e-15, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 61/151 (40%), Gaps = 6/151 (3%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 L L ++ LS+ + GY+++K + LT+GN+ PS G +YP L L+E+ I Sbjct: 14 RARSLLALYVIHSLSKGEKSGYDILKELGELTEGNWVPSKGTLYPLLHQLEEEGQIVSVP 73 Query: 118 EEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + G + LT G + L+ R +++ + + Sbjct: 74 KTTGARARAVFCLTPLGKETLKRIRAHSGEHHKKMAHYRQVITAIFGDTIHP---ELNLL 130 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 +++ ++ + + ++ R ++ + Sbjct: 131 FEIKTLLDEVQKENEPEAMKILRRCRDELKK 161 >UniRef50_B8I8C9 Transcriptional regulator, PadR-like family n=12 Tax=Bacteria RepID=B8I8C9_CLOCE Length = 116 Score = 82.3 bits (202), Expect = 9e-15, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 4/105 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G ++IL +L ++D +GY++ + +E + +T G +YP L L+ +I EE Sbjct: 9 KGSTTMLILKLLEKEDMYGYQMTRELELRSDNTFTLKEGTLYPILHSLESDGMIEAYWEE 68 Query: 120 ----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 +K +T +G + LE+ +++ + +K G + Sbjct: 69 TDSARKRKYYRITVKGRKLLEDKQKEWSKYADAVKKVLGGGEVEP 113 >UniRef50_C7QKF8 Transcriptional regulator, PadR-like family n=4 Tax=Actinomycetales RepID=C7QKF8_CATAD Length = 123 Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L ++L +L+ SHGY LI+A+ + + G + G +YP L L+ L+ E Sbjct: 7 RGHLDGLVLAVLATGPSHGYGLIEALRDRSGGVFDLPEGSVYPALHRLERAGLVASGWSE 66 Query: 120 ---GGKKQIALTEQGAQWLEENREQVEMIEERIK 150 ++ +LT G++ E+ R + ++ Sbjct: 67 VAGRRRRVYSLTASGSRAAEDRRTEWRSFSAAVE 100 >UniRef50_UPI0001B57518 PadR family transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57518 Length = 128 Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%) Query: 82 IKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQ 141 ++ I T + PSPG IYP L L+++ L+ E EGG++ LTE G + + E+ Sbjct: 1 MQEIRRRTNDEWRPSPGSIYPILQQLEDEGLVRTAE-EGGRRVAHLTEAGREHVAGREEE 59 Query: 142 VEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAF 201 + E AR A R ++ + A + S+ A+ +K++ R + Sbjct: 60 FAALWES-SAREEPGADRFAALYQQIGELAGAAAQVAHTGSEAQCAEARKVLREARRKLY 118 >UniRef50_A7KUY2 Predicted transcription regulator n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KUY2_9CAUD Length = 143 Score = 82.0 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%) Query: 63 LRLVILDILSRDDS-HGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE-EEG 120 L + IL +L+R + +G E+I IEN G + PS G++YP L L+ + L+ E Sbjct: 28 LTIYILHLLTRKERLYGKEIINEIENRFAGEWKPSHGLVYPILRELEAEGLVKGHWIGES 87 Query: 121 GKK---QIALTEQGA-QWLEENREQVEMI 145 KK ++T++G ++EE + + Sbjct: 88 SKKTIRTYSITKKGKAAYIEEKEKHKDAF 116 >UniRef50_A6LMA8 Transcriptional regulator, PadR-like family n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LMA8_THEM4 Length = 120 Score = 80.8 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Query: 49 RGGGRRQRFFGHGELRLVILDIL-SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFL 107 +G RR R F G+ L +L SHGYEL++ + N+ PGVIY L L Sbjct: 3 KGFRRRGRGFVMGDFLAASLLLLLKEKPSHGYELVQRLYEANFYNFRHDPGVIYNILRRL 62 Query: 108 QEQSLITIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERI 149 +E IT EEG +K +T++G +LE + +++ + +++ Sbjct: 63 EEGGFITYEIEEGDGPFRKVYKITDEGIDYLELIKVEIKQLYKQL 107 >UniRef50_Q2RG05 Transcriptional regulator, PadR family n=2 Tax=Clostridia RepID=Q2RG05_MOOTA Length = 119 Score = 80.4 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L +L +++ ++ +GYE++K + G TP G IYP L L+++ L+T E Sbjct: 20 KGALEFCVLAVIAWEERYGYEIVKVLNE--HGLTTP-EGTIYPLLARLKKEGLVTATWRE 76 Query: 120 GG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 +K +T++G L+E + E + + G Sbjct: 77 TAQGNPRKYYRVTDKGKTALDEFKRSWSEFTETVNSILKGG 117 >UniRef50_A6C2L2 Transcriptional regulator, PadR-like family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2L2_9PLAN Length = 120 Score = 80.0 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 6/119 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ G G + +L +L +GYEL++A+ T G +YP L LQ Q L Sbjct: 4 ERELMRGAGPV--AVLKLLEEGPKYGYELVEALSEQTGGILDMGQSTLYPLLYNLQSQGL 61 Query: 113 ITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRA 167 I +E +K +LT +G + L + Q + +++ + + + + A Sbjct: 62 IRPSWQESESGRKRKYYSLTAKGKKRLASDTAQWGAVTSAMQSLGILSGTQPKLRGGEA 120 >UniRef50_A6DRV1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRV1_9BACT Length = 113 Score = 80.0 bits (196), Expect = 5e-14, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR----EEEGG 121 V+L +L+ + +GYE+IK + T G + G +YP L ++ + LI E E Sbjct: 14 VVLKLLNEREMYGYEIIKEVHERTNGEFQWKEGTLYPCLHRMEGEGLIKSEWQKPEGERR 73 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K ++ G Q L + + E + Sbjct: 74 RKYYHISGLGKQQLTSRVNEWQKFSESVNT 103 >UniRef50_C6VSB4 Transcriptional regulator, PadR-like family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSB4_DYAFD Length = 117 Score = 80.0 bits (196), Expect = 5e-14, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 4/103 (3%) Query: 60 HGELRLVILDILSRDD-SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G L+ ++L++L+ D +GYE+ + +++ T G + G +YP L L+++ L+ Sbjct: 12 RGTLKTIVLNLLAEHDRMYGYEITQEVKDRTGGAIALTFGALYPVLHKLEQEGLLLTESV 71 Query: 119 EGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 E +K +LT +G + +E E ++ L Sbjct: 72 EVDGRLRKYYSLTHRGNETARTKTNDLERFIEAVRLLLAPKNL 114 >UniRef50_Q9RSP5 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RSP5_DEIRA Length = 134 Score = 79.6 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 5/87 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L ++L L +G +I+ +++ T G++ G +YP L L+++ I + Sbjct: 30 RGTLDFLLLASLEDGPLYGLRIIQDVQDRTDGHFRFKEGTLYPALHRLEKRGWIVGEQRP 89 Query: 120 GG-----KKQIALTEQGAQWLEENREQ 141 +K LTE G L REQ Sbjct: 90 SDAGGPPRKYYELTEGGKTELARQREQ 116 >UniRef50_A8L6H3 Transcriptional regulator, PadR-like family n=5 Tax=Actinomycetales RepID=A8L6H3_FRASN Length = 132 Score = 79.6 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 4/98 (4%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE----G 120 ++L L+ HGY +I+ + +++ G T PG +Y LD L + L+ + EE Sbjct: 11 FLVLAALADGPRHGYAVIREVTDISGGRVTMRPGTLYGALDRLAGEGLVRVEREEVVNGR 70 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 ++ +LT+ GA L E E++ R Sbjct: 71 LRRYYSLTDDGAGALTEQTERLRANVAEADRRLRLRVR 108 >UniRef50_A8TFR8 Transcriptional regulator, PadR-like family n=1 Tax=Methanococcus voltae A3 RepID=A8TFR8_METVO Length = 158 Score = 79.6 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 11/153 (7%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R + +IL +S HGY+LI I G SP IYP L ++ I Sbjct: 1 MRTKKKELMEYLILHHISEKPYHGYKLICDISKDI-GVPKISPSFIYPVLSKFTKKEYIK 59 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + + KK +T+ G ++L+EN E++ I E K +L N +V Sbjct: 60 VILHD-DKKVYEITDLGVEYLKENSEKLNEILESTKNIREFHSLGGN--------KLHSV 110 Query: 175 LDLRVNQ-SDISDAQIKKIIAVIDRAAFDITQL 206 + + S KK+ + I A ++ ++ Sbjct: 111 YRVIHTEYSKFDPETKKKVSSCILNFANELEKI 143 >UniRef50_A9AWY2 Transcriptional regulator, PadR-like family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWY2_HERA2 Length = 111 Score = 79.6 bits (195), Expect = 7e-14, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 4/101 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 +R G L L+++ ++ + +GY + K I LT G +YP L L+++ +I Sbjct: 3 ERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGMIE 62 Query: 115 ----IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA 151 RE+ ++ +T G L+E R Q + Sbjct: 63 GFWQRREDGVDRRYYRITAAGQAVLDERRAQWSRFSAAVSK 103 >UniRef50_B8FYD5 Transcriptional regulator, PadR-like family n=22 Tax=Clostridiales RepID=B8FYD5_DESHD Length = 115 Score = 79.3 bits (194), Expect = 7e-14, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 48/87 (55%), Gaps = 4/87 (4%) Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE- 119 G ++IL +L D +GY++I+ + +Q + G +YP L L++++++ E+ Sbjct: 10 GSTTMLILKLLEETDMYGYQMIEELSKKSQNIFELKAGTLYPLLHSLEQKNMLISYEKST 69 Query: 120 ---GGKKQIALTEQGAQWLEENREQVE 143 +K ++T+ G ++L+E ++ + Sbjct: 70 TNLRVRKYYSITKTGRKYLDEKTKEWK 96 >UniRef50_D2QHL5 Transcriptional regulator, PadR-like family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHL5_9SPHI Length = 114 Score = 79.3 bits (194), Expect = 7e-14, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 4/90 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE----EGG 121 ++L IL+ +S+GYE+I+ I + G + G +YP L L+++ L+ + E Sbjct: 16 LVLTILADGESYGYEIIRNIRLRSAGQLDVAEGTLYPVLRKLEQRGLVQTQWRTADNERQ 75 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K AL QG + L+ R MI + +++ Sbjct: 76 RKYYALKTQGREVLQAERANWNMINQLLQS 105 >UniRef50_D1PN95 Transcriptional regulator, PadR family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN95_9FIRM Length = 121 Score = 79.3 bits (194), Expect = 9e-14, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L +++L +L+ SHGY+LI + + G G +YP L L+E+ I Sbjct: 12 LKKGVLEMLVLRLLADAPSHGYQLIVRLRESSGGMLELKEGTLYPILYRLEEEGCIASAW 71 Query: 118 EEGG---------KKQIALTEQGAQWLEE 137 ++ ++TE G LE+ Sbjct: 72 NRPDKQLSSGKVPRRVYSVTETGRTVLEQ 100 >UniRef50_C8Q356 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8Q356_9ENTR Length = 110 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE--- 118 + +VIL L R SHGY LI+ I LT G + G +YP L ++++ LI E Sbjct: 12 HIEMVILAALERGPSHGYALIELIHQLTDGVLSFQEGTVYPLLHRMEQRGLIGAEWEIAP 71 Query: 119 -EGGKKQIALTEQGAQWLEENREQVEM 144 + ++ LT++G Q L RE + Sbjct: 72 SKRKRRVYQLTKEGQQELVRKREAWDS 98 >UniRef50_A2TYI9 Transcriptional regulator PadR-like family n=7 Tax=Bacteroidetes RepID=A2TYI9_9FLAO Length = 112 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 4/94 (4%) Query: 60 HGELRLVILDILSRDD-SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G L+ +IL +L+ + +GYE+ + ++ LT+G + G +YP L L+ L+ + Sbjct: 8 KGSLQTIILKLLASNTKMYGYEITQKVKELTKGELKITEGALYPALHKLEADGLLDVEVA 67 Query: 119 EGG---KKQIALTEQGAQWLEENREQVEMIEERI 149 + G +K LTE G + E+++ + + Sbjct: 68 KVGNRLRKYYKLTENGTKETANKLEEMQDFLKTM 101 >UniRef50_C0ZGN3 Putative transcriptional regulator n=3 Tax=Firmicutes RepID=C0ZGN3_BREBN Length = 110 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 7/97 (7%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L IL ++ + +GYE+I +E IYP L L ++ I+ ++ Sbjct: 12 RGTLDFCILLLIKQRPYYGYEIISKLEQ--YPIIAAKENTIYPLLRRLLKEEYISSSWQD 69 Query: 120 GG-----KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K +TE+G ++L + + + I Sbjct: 70 STEGLPPRKYYTITEKGNEYLNAMSLEWDNLLTAISE 106 >UniRef50_A8SUL2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUL2_9FIRM Length = 142 Score = 78.9 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G + L++L +LS+ D +GY+L + IE LT G G +YP L L + I+ + Sbjct: 28 FRRGSVELMVLYLLSQKDCYGYQLTQLIEELTDGVICIPIGSLYPALYKLIDAGYISDDK 87 Query: 118 EEGGKK----QIALTEQGAQWLEENREQ 141 GK+ + + G + L+ E Sbjct: 88 RLVGKRMERVYYHIEDTGRERLKILLED 115 >UniRef50_D2ART9 Transcriptional regulator protein-like protein n=5 Tax=Actinomycetales RepID=D2ART9_STRRD Length = 168 Score = 78.5 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSP--GVIYPTLDFLQEQSLITIREEE- 119 +R +L +L+++ +HGYEL +A+E + Y PSP G IY TL L++ L+ + + E Sbjct: 1 MRQSLLALLAKEPAHGYELKQALEQIFGSAY-PSPNIGQIYVTLSRLEKDGLVRVVDVEQ 59 Query: 120 ---GGKKQIALTEQGAQWLE 136 KK LT G + L+ Sbjct: 60 SNRPNKKVYYLTAAGREALD 79 >UniRef50_B8D3Z1 Transcriptional regulator, PadR-like family n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D3Z1_DESK1 Length = 151 Score = 78.5 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 13/147 (8%) Query: 56 RFFGHGE-LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R G+ + L+ILD+ HGY L+K I T +PG+IYP L + E+ LI Sbjct: 3 RIRHRGKYVELLILDMSRGGRIHGYYLLKKIREETG--LPVNPGLIYPLLKGMVEKGLIK 60 Query: 115 IRE--EEGGKK-QIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNF 171 E E+G +K +TE+G ++LEEN++++E+ + + + + + R + F Sbjct: 61 AEESFEKGRRKIVFRITEKGEKYLEENKQELEIARKYFEKLKLAKEVGLTKLVARLIRIF 120 Query: 172 KAVLDLRVNQSDISDAQIKKIIAVIDR 198 + + ++ Q++ + + Sbjct: 121 EKI-------DQLTPEQLEVVRGITRE 140 >UniRef50_Q1AUC4 Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUC4_RUBXD Length = 127 Score = 78.5 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE---GG 121 L+IL ++S+ +G LI+ I LT G + SP +YP L ++E+ +T E+ Sbjct: 27 LLILHLVSKRPEYGNSLIRKIGELTGGVMSVSPNTVYPLLRRMEEKGYLTAEWEDPDTRS 86 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 ++ +T +G + EE +E+ R+K Sbjct: 87 RRFYTITPRGREKYEEMKERFGEHLLRVKEAIEA 120 >UniRef50_A2BMT4 Predicted transcriptional regulator n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BMT4_HYPBU Length = 158 Score = 78.5 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 11/146 (7%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQ-GNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 R ++L +L+ GYELIK + +L SPG +YP L L+E+ LI R E G Sbjct: 10 RYLVLMLLAEGPKTGYELIKQLRSLFARYGGRASPGTVYPVLRRLEEEGLIRSRLEPYGA 69 Query: 122 --KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 +K LT +G + L E + + E + R + + + VL+ Sbjct: 70 RVRKVYELTGEGLRALLEMMSRWVSVLETALQLHIPVFRRAGREDGDTVKLVEEVLERL- 128 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQ 205 +A +++ ++ A + Q Sbjct: 129 ------EAAAEQLEKLLTEARRVLRQ 148 >UniRef50_B0NZB0 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=B0NZB0_9CLOT Length = 112 Score = 78.1 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 4/79 (5%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 + ++ L +L ++D +GY+L ++I+++T G + G +YP L LQ++ I+ R+ + GK Sbjct: 14 IEMLFLKVLEQEDCYGYQLTQSIQDITNGQIKIAEGTMYPILYKLQDKGYISDRQVKVGK 73 Query: 123 K----QIALTEQGAQWLEE 137 + L G ++L + Sbjct: 74 RQTRVYYHLEPAGKEYLSQ 92 >UniRef50_B8FGB8 Transcriptional regulator, PadR-like family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FGB8_DESAA Length = 178 Score = 78.1 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 6/81 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 ++ IL +L +D HGY + + IE ++ + G IYP L L+++ LI++REE Sbjct: 3 VKYSILGLLHYEDMHGYRIKEHIEKNFGYMWSVNYGQIYPNLKKLEQEGLISMREEVQNG 62 Query: 122 -----KKQIALTEQGAQWLEE 137 KK +LT+ G + +E Sbjct: 63 KKGPPKKLYSLTDAGREAFQE 83 >UniRef50_C0H3Y4 Putative DNA-binding protein yizB n=1 Tax=Bacillus subtilis RepID=YIZB_BACSU Length = 115 Score = 78.1 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G L IL +L +GYEL +++ + S G IYP L + E+ I Sbjct: 14 FRKGIFELAILSLLRSKPMYGYELTSSLKTTSALAI--SEGAIYPILKRMTEKGWIEFFW 71 Query: 118 EEG----GKKQIALTEQGAQWLEENREQ 141 E+ +K +T++G + L+E E+ Sbjct: 72 EDSLDGPKRKYYKMTQKGEEMLKERLEK 99 >UniRef50_D2QES7 Transcriptional regulator, PadR-like family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QES7_9SPHI Length = 124 Score = 77.7 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 19/110 (17%) Query: 60 HGELRLVILDILSR----------------DDSHGYELIKAIENLTQGNYTPSPGVIYPT 103 G L+ +IL +L+ +GYE+ + ++ TQG S G +YP Sbjct: 2 RGTLKTIILKLLAEPRPSTPSQVGAGPSVPGRMYGYEITQLVKERTQGQIALSFGALYPV 61 Query: 104 LDFLQEQSLI--TIREEEGG-KKQIALTEQGAQWLEENREQVEMIEERIK 150 L L+++ L+ E EG +K +LT QG + + E E ++ Sbjct: 62 LHKLEQEGLLITETEEVEGRLRKYYSLTPQGNEAAVQKVSDFERFMETMR 111 >UniRef50_A8AAT8 Transcriptional regulator, PadR family n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AAT8_IGNH4 Length = 124 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 4/93 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R + L L +L LS +GY+L+K ++ LT + P IYP L + E+ L+ Sbjct: 13 HRSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYPLLKKMVEEGLLD 72 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEE 147 + E +LTE G L+ R E I E Sbjct: 73 VDEHG----VYSLTEAGRAVLKALRRNSEAINE 101 >UniRef50_C5CF63 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF63_KOSOT Length = 180 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ- 124 VIL LS GY++ + + T Y S G IYPTL L+++ +T +E G+K Sbjct: 4 VILGFLSSGAMTGYDIKQVMSVSTSFFYDASYGSIYPTLKKLEKKGFVTSKEVVEGRKVK 63 Query: 125 --IALTEQGA----QWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 +LT++G +WLE+ E + L ++ + + + ++ Sbjct: 64 VFYSLTDKGRKEFLKWLEKPSAPANTKYEFLAKLFFARHLPKDRLLAMVSRHISEIREVL 123 Query: 179 VNQSDISDA 187 I Sbjct: 124 SKLQMIEKE 132 >UniRef50_C5CHI3 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CHI3_KOSOT Length = 163 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 L VIL L GY+L K I+ T +T S G +YP L L++++ + I+E E GK Sbjct: 2 LDYVILGFLRIMPMTGYQLKKNIDVSTSNFWTASFGGLYPALARLEKKNWVKIKESE-GK 60 Query: 123 KQIALTEQGAQWLE 136 K ++TEQG L+ Sbjct: 61 KIYSITEQGRNTLD 74 >UniRef50_Q1IS64 Transcriptional regulator, PadR family n=2 Tax=Acidobacteria RepID=Q1IS64_ACIBL Length = 121 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 4/99 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R G L++L +L HGYE+ + IE ++G + YP L L+++ I Sbjct: 14 DRELKKGSAELLVLSLLEGRPRHGYEISQMIELRSEGAVRFNVASFYPLLYRLEKRGWIV 73 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERI 149 R E ++ LT QG Q L+E + + Sbjct: 74 GRWVEKAGQRRRRYYRLTAQGKQTLKEQQSTWLQFVAAM 112 >UniRef50_D1YY91 Putative PadR-like family transcriptional regulator n=1 Tax=Methanocella paludicola SANAE RepID=D1YY91_METPS Length = 145 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQI 125 IL L+ +G E++ AIE+++ G++ PSPG IYP L + E+ LI R+ E G+ + Sbjct: 26 WILYTLNDSPKNGAEIMDAIESMSYGSWRPSPGSIYPLLVKMVEEGLI--RKREDGRYEA 83 Query: 126 ALT 128 A T Sbjct: 84 ADT 86 >UniRef50_B0MSB8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MSB8_9FIRM Length = 115 Score = 76.9 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 4/98 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G L ++IL +L ++ +GY+L + I + G + + G +YPTL L ++ LI R Sbjct: 8 FKRGTLEMLILHLLKGEEMYGYQLTQEIGKRSNGTFRITEGSMYPTLYRLLDKELIADRL 67 Query: 118 EEGGKK----QIALTEQGAQWLEENREQVEMIEERIKA 151 E G++ + +G ++L++ ++ E+ I A Sbjct: 68 ELVGRRRTRVYYHIEPKGLEYLDKLEKEYELTSAGIDA 105 >UniRef50_Q5WGK7 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGK7_BACSK Length = 170 Score = 76.9 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 38/72 (52%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK 123 + ++L ILS GYE+ K I+N + + S G IYP L L ++ ++ +G +K Sbjct: 6 KWIVLGILSGGCRTGYEIKKVIDNSFEHFWKMSYGQIYPALKTLVKEGYVSQIGSDGDRK 65 Query: 124 QIALTEQGAQWL 135 + +TE G L Sbjct: 66 EYEITEAGKHKL 77 >UniRef50_C9D3S1 Transcriptional regulator n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D3S1_9RHOB Length = 192 Score = 76.9 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 15/162 (9%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT---- 114 G +L + GY++ +AI T + S G IYP L L+++ LI Sbjct: 10 GRKRTAYAVLGFVMMGPKSGYDIKQAISRSTSFFWNESAGQIYPILRALEDEGLIERDTT 69 Query: 115 --IREEEGGKKQIALTEQGAQWLEE-----NREQVEMIEERIKARCVGAALRQNPQMKRA 167 + ++ +T++G L+ N + + + + + A + Sbjct: 70 SPTSTGKRQRQMYQITDRGQAALQNWIAGPNSDVI--VRNELLLKMFFGASVAPQVIIEM 127 Query: 168 LDNFKAVLDLRVN--QSDISDAQIKKIIAVIDRAAFDITQLD 207 L++ + L R+ + I Q ++ ++ AAF I+ LD Sbjct: 128 LEDHRHGLQDRIAFFEEIIRQRQAEEAAGKLENAAFMISTLD 169 >UniRef50_Q2BFH1 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFH1_9BACI Length = 99 Score = 76.9 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 V+L ++ +HGY+L+ AI ++ G PG +Y L +Q+ LI++ E +G +K Sbjct: 7 YVLLALM--RPNHGYQLMHAIAEVSHGRVNMGPGTLYGVLSRMQKDGLISLAENDGRRKT 64 Query: 125 IALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 +T G Q L +++ + E + G Sbjct: 65 YKITTDGEQALRVEYGRLKALIEDSRILEEGEGN 98 >UniRef50_Q7NDS5 Glr4157 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDS5_GLOVI Length = 182 Score = 76.6 bits (187), Expect = 5e-13, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 5/90 (5%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL----ITIREEE 119 + IL +LS GY++ K I ++ S G IYP L L ++ L + +E + Sbjct: 8 KYAILGLLSLQPMSGYDIRKKIAASIGHFWSESYGQIYPILRQLVQEGLATRTVERQEGK 67 Query: 120 GGKKQIALTEQGAQWL-EENREQVEMIEER 148 + ALT+ G + L +E VE ER Sbjct: 68 PDRYVYALTDGGREQLVGWLQEPVESATER 97 >UniRef50_B5IBP0 Transcriptional regulator, PadR family, putative n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBP0_9EURY Length = 112 Score = 76.6 bits (187), Expect = 5e-13, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R G + L IL ILSR +G E+IK +++L+ G G +YP L ++ + LI Sbjct: 6 RELKKGLIELSILSILSRGKKYGLEIIKELDSLSNGFLKIKEGTLYPALHRMEARGLIES 65 Query: 116 RE--EEGG--KKQIALTEQGAQWLEENREQVEMIEERI 149 E G +K LT++G + EE +E + E + Sbjct: 66 EWVLVESGIPRKYYKLTDEGIKKYEEGKEIWRITVESM 103 >UniRef50_D1PPF6 Transcriptional regulator, PadR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPF6_9FIRM Length = 158 Score = 76.2 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 12/152 (7%) Query: 10 KHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGR-----RQRFFGHGELR 64 + + + + +G CG + + G+ + G L Sbjct: 5 HYTRKETAPASPAVRRGKGSCKKYGILLTKDILCGTMYTKEAGQMNLDDWKSQIKRGTLE 64 Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG--- 121 IL ++ R S+GYE+I +E IYP L L ++ I+ +E Sbjct: 65 FCILLMIRRQPSYGYEIISTLEK--YPLLAAKENTIYPLLRRLLKEGWISSAWQESTEGL 122 Query: 122 --KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K +LT G ++LE ++ + ++ Sbjct: 123 PPRKYYSLTAAGQEYLEAMSKEWSDLLAAVQE 154 >UniRef50_B7K746 Transcriptional regulator, PadR-like family n=3 Tax=Cyanobacteria RepID=B7K746_CYAP7 Length = 191 Score = 76.2 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 10/132 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L L L +L R+ HGY L + +E L G + + G IYP L L+E+ + + EE G Sbjct: 2 LELATLGLLQREPLHGYRLKQQLELLMSGCISVNYGAIYPLLKRLEEKGFLEVCLEEDGH 61 Query: 122 ----KKQIALTEQGAQWLEENR-----EQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 +K +TE G + ++ E R + + ++ + + L++ Sbjct: 62 GGNTRKIYQITETGRERWKKKMMEHPHESWVHARSRFMIKFFFFSYIESQERIKLLEHRL 121 Query: 173 AVLDLRVNQSDI 184 V LR+ DI Sbjct: 122 KVCQLRLENQDI 133 >UniRef50_A6BZG9 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZG9_9PLAN Length = 110 Score = 76.2 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G + ++IL+++S ++GYE+ + + N + + G +YP L LQ + L+ E Sbjct: 7 AGTMEMLILELVSEGPTYGYEITQRVTNRSANEFELKEGSLYPALHKLQRKKLLKSFWRE 66 Query: 120 ---GGKKQIALTEQGAQWLEENREQVEMIEERIK 150 +K LT QG + L E R++ + I+ Sbjct: 67 VDGRRRKYYELTIQGQKALNEKRQEWKQFSSAIE 100 >UniRef50_Q0W4V9 Putative transcription regulator (PadR-like family) n=3 Tax=Euryarchaeota RepID=Q0W4V9_UNCMA Length = 119 Score = 76.2 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + + G +L IL +L D +GYELI +E + G YP L ++ L Sbjct: 7 KWLKELKKGSTKLSILSLLRSGDKYGYELIHELEVRSGGIIIIKESNAYPALHTMEGDGL 66 Query: 113 ITIREEEGG-----KKQIALTEQGAQWLE 136 + +E G +K +T +G ++LE Sbjct: 67 VESYWKETGEGIPPRKYYRITPRGREFLE 95 >UniRef50_B3XP74 Transcriptional regulator, PadR-like family n=3 Tax=Lactobacillales RepID=B3XP74_LACRE Length = 172 Score = 75.8 bits (185), Expect = 9e-13, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 11/138 (7%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT----IREEE 119 R VIL IL GYE+ ++N Y + G+IYPTL L+++ + I+E++ Sbjct: 4 RDVILGILRNKPRTGYEINDILQNQISYFYDGTYGMIYPTLKKLEKEGKVKRETVIQEDK 63 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 K ++T++G + L+E E ++ E + + ++ ++ K+ + ++ Sbjct: 64 PNKNIFSITDEGKEELKEYLESNKVEEVFKSDFLMKLFFGDDLSKQKVIELIKSEIKVK- 122 Query: 180 NQSDISDAQIKKIIAVID 197 + QIK++ ++ Sbjct: 123 ------EDQIKRLEDSLE 134 >UniRef50_B8I032 Transcriptional regulator, PadR-like family n=19 Tax=Firmicutes RepID=B8I032_CLOCE Length = 113 Score = 75.4 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 IL L+ HGY +I ++ +T G G IY TL+ ++ SLI EE +K Sbjct: 17 FYILLSLNE-PRHGYGIILYVKEITGGRINLGAGTIYGTLNKFEKDSLIEPSGEEDRRKL 75 Query: 125 IALTEQGAQWLEENREQVEMI 145 +TE+G L++ +++ + Sbjct: 76 YRITEKGKWLLKQEISRIDEM 96 >UniRef50_C4RM26 PadR family transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RM26_9ACTO Length = 130 Score = 75.4 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 4/122 (3%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG--- 121 ++L L+ HGY LI+A+ L+ G+ G +Y LD L EQ LI I EE Sbjct: 6 FLVLTALAAQPLHGYGLIQAVAQLSDGDVRLRAGTLYGALDRLTEQGLIEIDHEEAVDGR 65 Query: 122 -KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 ++ L++ GA L E+++ +++ A+ RAL L R Sbjct: 66 LRRYYRLSDSGAAALAVQAERLQRRATVAQSQLRRRAVPGMSFGARALGWLPTGLARRTA 125 Query: 181 QS 182 Sbjct: 126 LE 127 >UniRef50_A1S0L0 Transcriptional regulator, PadR family n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1S0L0_THEPD Length = 157 Score = 75.4 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 9/130 (6%) Query: 71 LSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR---EEEGGKKQIAL 127 L + H Y L+K +E + PSPG +YP L L + L+ + + + Sbjct: 20 LEKGPLHAYGLMKELEKSLG--FRPSPGALYPILRKLIREDLVVAELRGSGDVKTRVYNI 77 Query: 128 TEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDA 187 TE+G +LE +R ++E +A ++ R +LD + D A Sbjct: 78 TEKGRSFLEHHRGELEEALSLARAWKRFEEVKG----YRLFHAIDEILDSINSLDDQRLA 133 Query: 188 QIKKIIAVID 197 +++++IA + Sbjct: 134 ELRRLIAEFE 143 >UniRef50_A8M7C7 Transcriptional regulator, PadR-like family n=2 Tax=Bacteria RepID=A8M7C7_SALAI Length = 117 Score = 75.4 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT----IREEEGG 121 ++L +L + DS+GYE+I +I +L+ G G++YP L L Q LI + Sbjct: 15 LVLAVLEQGDSYGYEIINSIRDLSGGELEWKQGMLYPLLHRLASQGLIESYQGVSAAGRV 74 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARC 153 +K L G + LE R+ ++I + A Sbjct: 75 RKYYRLLPVGRRQLETCRQNFDLISSTLAALG 106 >UniRef50_Q9RTB9 Putative uncharacterized protein n=2 Tax=Deinococcus radiodurans RepID=Q9RTB9_DEIRA Length = 104 Score = 75.4 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 3/92 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +LR+++L +L+R HGY + +AI+ ++G T G++YP L L+ + L+ E++ G Sbjct: 6 QLRMLVLAVLARQPEHGYAIAQAIQARSEGLLTAREGLLYPVLHALEAEGLVVSAEQQVG 65 Query: 122 ---KKQIALTEQGAQWLEENREQVEMIEERIK 150 +++ LTEQG + L +R E ++ Sbjct: 66 GRTRREYRLTEQGRRALARSRRAWEQETRAVR 97 >UniRef50_Q1IMK2 Transcriptional regulator, PadR family n=9 Tax=Acidobacteria RepID=Q1IMK2_ACIBL Length = 113 Score = 75.0 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L L+IL +++ HGY +++ I+ +++ G +YP L L+ + +T Sbjct: 9 LPQGTLDLLILRVVALGPVHGYAIVQRIQQISKDALHIQQGSLYPALHRLENKEFLTADW 68 Query: 118 --EEGGK--KQIALTEQGAQWLEENREQVEMIEE 147 E G+ K LT +G L+ E + E Sbjct: 69 GPSETGREAKFYRLTTKGRAQLKAETESWTRLTE 102 >UniRef50_B4D7I1 Transcriptional regulator, PadR-like family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7I1_9BACT Length = 115 Score = 74.6 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 4/90 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE----GG 121 +IL IL+ +S+GY +I+ I+ +Q + G++YP L L+ + I R E Sbjct: 19 LILSILAEGESYGYAIIQEIKTRSQNRMEWTDGMLYPVLHRLERKGQIKSRWVEAESGRK 78 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K +L + G + L E+RE ++ + Sbjct: 79 RKYYSLKQPGKKALAEHREHWAIVHAVLTG 108 >UniRef50_Q639U6 Transcriptional regulator, PadR family n=74 Tax=Bacillus RepID=Q639U6_BACCZ Length = 135 Score = 74.6 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 ++L ++ HGY +++ +E +T G PG +Y L ++ LI KK Sbjct: 47 YILLSLV--KPMHGYGIMQMVEEMTNGEVKLGPGTLYGNTTKLLKEKLIVEVASTDRKKC 104 Query: 125 IALTEQGAQWLE 136 LT G + LE Sbjct: 105 YELTPLGREVLE 116 >UniRef50_C6LLA8 Transcriptional regulator, PadR family n=5 Tax=Firmicutes RepID=C6LLA8_9FIRM Length = 109 Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 IL L + HGY + + + +T G S G +Y TL +++ L+ + EE +K Sbjct: 19 FYILFCL-QQPQHGYGISQQVRQMTGGELIISAGTMYGTLSKMEKDGLLAFQREEEKRKI 77 Query: 125 IALTEQGAQWLEENREQVEMIEERIKARCV 154 +TE G + L +++E + + K V Sbjct: 78 YQITELGKEVLNLELKRIERLYKNSKGEGV 107 >UniRef50_Q0TT89 Transcriptional regulator, PadR family n=9 Tax=Clostridium RepID=Q0TT89_CLOP1 Length = 110 Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 5/93 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G + +IL +L D +GYE+ K I ++ + G +Y L L++ L+ + Sbjct: 9 KGHVESIILSLLQGKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVISYWGD 68 Query: 120 -----GGKKQIALTEQGAQWLEENREQVEMIEE 147 G +K +TE G +L+E + + E ++ Sbjct: 69 CKSGGGRRKYFKITEDGVNYLKEKKSEWEFLKS 101 >UniRef50_C4F9Z1 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9Z1_9ACTN Length = 116 Score = 74.3 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI---- 115 G + +IL LS+ DS+GYE++K+I + G Y +Y +L L+ Q + Sbjct: 12 RGNIDAIILKTLSKGDSYGYEILKSIGTASLGEYEMKEPSLYTSLKRLEGQKFVESFWGN 71 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 + +K LT+ GAQ L E E+ E + I + Q Sbjct: 72 ETQGARRKYYRLTDAGAQELVEATERWERVRGIIDRLLIMDGSEQ 116 >UniRef50_C7MG61 Predicted transcriptional regulator n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MG61_BRAFD Length = 132 Score = 74.3 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 7/123 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R + L IL + HGY + +A+ G P G +YP L L+E Sbjct: 13 RWPATWARALLPSAILACVEEAPLHGYAIGQALGARGFG--VPRGGSLYPALARLEESGA 70 Query: 113 ITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRAL 168 I G ++Q LT G L +R +E + + A + R + A Sbjct: 71 IAAEWVPGPSGPARRQYTLTRAGRDQLARDRTALEALTAALDA-APPGSHRTAVMAEGAT 129 Query: 169 DNF 171 D+ Sbjct: 130 DDL 132 >UniRef50_D1BAH9 Transcriptional regulator, PadR family n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAH9_SANKS Length = 114 Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 L +L I+S +++GY + + + + G G +YP L L++ +T E Sbjct: 12 RSALSGAVLSIVSEGETYGYVIAQRLAD--GGMGVVKGGTLYPLLARLEQDGDVTATWRE 69 Query: 120 G----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 G G+K ALTE G LE +R E A +G Sbjct: 70 GTSGPGRKYYALTEAGTVRLEAHRRDWAAFTEASTAIIMG 109 >UniRef50_D0L8B8 Transcriptional regulator PadR family protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L8B8_GORB4 Length = 252 Score = 73.9 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 6/81 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE--- 119 L L +L +L HGYEL K + L S G +YPTL +Q LI Sbjct: 2 LELAVLGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPTLRRMQADGLIDEAATPSGM 61 Query: 120 ---GGKKQIALTEQGAQWLEE 137 G++ LT++G + E Sbjct: 62 KVRRGRRVYQLTDKGRERFNE 82 >UniRef50_A7VYN2 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYN2_9CLOT Length = 113 Score = 73.5 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPS-PGVIYPTLDFLQEQSLITIR 116 F G L +V+L +++R S+GYELI ++ G + + G +YP L L+++ LI Sbjct: 9 FKKGALEMVLLSLIARQRSYGYELISRLQREGGGLFQETKEGTLYPILYRLEDEGLIESE 68 Query: 117 EEEGG----KKQIALTEQGAQWLEENR 139 KK +T+ G L E + Sbjct: 69 LASDSGRRVKKYYQITDLGLSALTERK 95 >UniRef50_UPI000196AD90 hypothetical protein CATMIT_00291 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196AD90 Length = 107 Score = 73.5 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE---E 119 L L+IL +L D + YEL K I ++G P G +YP + L E I+ Sbjct: 11 LDLMILSLLKEKDQYAYELTKEIAEKSKGRIEPKNGTMYPIIYKLIENGYISSNTVIYHN 70 Query: 120 GGKKQIALTEQGAQWLEENREQVEMI 145 + L G ++L++ + + + Sbjct: 71 KARVYYHLEPAGKEYLDKIIVEFDEL 96 >UniRef50_UPI0001788FC3 transcriptional regulator, PadR-like family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788FC3 Length = 174 Score = 73.5 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 7/119 (5%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYT-PSPGVIYPTLDFLQEQSLITIREEEGG-- 121 L++L L + HGYE+ + I+ +T G IY L+ ++ LI EE Sbjct: 4 LILLSFLRQRPMHGYEIQQLIQASRMDLWTNILSGSIYYALNKMESDGLIAATAEERTGA 63 Query: 122 --KKQIALTEQGAQWLEE-NREQVEMIEERIKAR-CVGAALRQNPQMKRALDNFKAVLD 176 +K ++T++G + ++ RE + + +K+ +G ++ + A++ + L Sbjct: 64 RLRKIYSITDEGEKLFQQMIRETLTLPPHTVKSDFSLGLVWIEDIPKEEAVELLEKNLK 122 >UniRef50_B9Y2R1 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2R1_9FIRM Length = 112 Score = 73.5 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---KKQIALT 128 + +GYELIK +++ + + G +YP L ++ + I + ++ A+T Sbjct: 21 KEQERYGYELIKTLKDRSNDAFDFKEGTLYPILHKMENEGWIRSENKTVNGRTRRYYAIT 80 Query: 129 EQGAQWLEENREQVEMI 145 +G + LE +EQ Sbjct: 81 ARGVKQLEVQQEQWSHF 97 >UniRef50_C2BYK8 PadR family transcriptional regulator n=3 Tax=Bacillales RepID=C2BYK8_LISGR Length = 108 Score = 73.5 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS----LI 113 F G L L L ++ D +GYEL + + GVIYP L L + Sbjct: 7 FKKGTLELCCLHLIHEKDCYGYELAQQVST----YIKVGEGVIYPILRRLVSDGWCTTYL 62 Query: 114 TIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E +K +T G Q L+ ++ + ++++ G Sbjct: 63 QDSSEGPSRKYYQITAAGEQHLQVLTKEWQQFTQQMEELLTGG 105 >UniRef50_O27532 Putative uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O27532_METTH Length = 165 Score = 73.5 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 14/120 (11%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENL--TQGNY-----TPSPGVIYPTLDFLQ 108 + F G + +IL ++S++ HGYE+++ +E +G + P P VIYP L L+ Sbjct: 45 KSFMRGFGKTMILWMISKEKIHGYEIMRRLERFYSFKGMHCKNIKPPGPSVIYPVLHDLE 104 Query: 109 EQSLITIREE---EGGKKQIALTEQGAQWLEEN----REQVEMIEERIKARCVGAALRQN 161 + LI E E K +T G + +E R+ V I E A Sbjct: 105 RKGLIEGSWEMHGEKRVKYYEITPLGEKTIERIRQIMRDHVSKIWEDFWNDMFPAEREDE 164 >UniRef50_Q17ZV3 PadR-family transcriptional regulator n=7 Tax=Clostridium RepID=Q17ZV3_CLOD6 Length = 177 Score = 73.5 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L +IL L + GY+L + + T + S G IYP L L+ + I E G Sbjct: 8 LEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGS 67 Query: 122 --KKQIALTEQGAQ-WLEENREQVEMIEER 148 KK ++T G + +LE ++ + + + Sbjct: 68 KLKKLYSITNTGKEVFLEWLKKPINFSKTK 97 >UniRef50_A0NMS3 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NMS3_9RHOB Length = 185 Score = 73.5 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 63 LRLVILDILSRDDSHGYELIKA-IENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE--- 118 +R + L ILS D+ GYE+ K E S G IYP L L+ + +T+REE Sbjct: 3 VRSLCLAILSFGDATGYEIRKESTEGRFSYFDDASFGSIYPALARLESEGFVTVREEPQA 62 Query: 119 -EGGKKQIALTEQGAQWLEENR---EQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + +K ++T+ G Q ++ + + + + AA ++RA++ K Sbjct: 63 GKPARKVYSITDAGRQDFIQSLCDPQAPDTFKSPFLLIALNAAKLPPEVIRRAIERRKTQ 122 Query: 175 LDLRVNQSDISDAQIKK 191 ++ + ++D + + Sbjct: 123 VEAELRL--LTDNEKDQ 137 >UniRef50_D2B3D4 Transcriptional regulator, PadR-like family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3D4_STRRD Length = 125 Score = 73.1 bits (178), Expect = 5e-12, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR--- 116 G L L++L L+ +++GYE+ K + G G +YP L+ L+E L+T Sbjct: 11 KGVLDLLVLASLTAGENYGYEIAKDLAESGLGQIK--GGTLYPVLNRLEEAGLVTAEFRA 68 Query: 117 -EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ 163 E G++ LT+ G Q L E EE ++A + + PQ Sbjct: 69 TERGPGRRYYRLTDLGRQTLAEQGGLWLGFEESVRA-VLARGHVETPQ 115 >UniRef50_Q9HJU5 Putative uncharacterized protein Ta0868 n=2 Tax=Thermoplasma acidophilum RepID=Q9HJU5_THEAC Length = 125 Score = 73.1 bits (178), Expect = 5e-12, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 12/123 (9%) Query: 76 SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWL 135 G E++ IE + G + PSPG IYP L+ L + LI IR+++G + L+E+G + L Sbjct: 1 MSGAEIMDEIEKHSFGLWRPSPGSIYPALESLVSEGLI-IRKDDG---RYELSEKGKEDL 56 Query: 136 EENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAV 195 ++ I + + + + L ++ + ++ S +++ +I Sbjct: 57 G-----IDNISQSDRMKTADSVLS---ELYSYAQYLEDIVRRDGKLSASDRDKLQTVIEK 108 Query: 196 IDR 198 ++ Sbjct: 109 LNE 111 >UniRef50_C9AC80 PadR family transcriptional regulator n=4 Tax=Enterococcus RepID=C9AC80_ENTCA Length = 114 Score = 73.1 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 L++L +L HGY ++K I L+QG + P +Y L L ++ I + E KK Sbjct: 17 LILLALL--KPKHGYLIMKQIHELSQGTFEIGPATMYTILKKLTKKGWIDLEESVDRKKI 74 Query: 125 IALTEQGAQWLEE 137 +T +G Q LE+ Sbjct: 75 YQITPEGRQVLEK 87 >UniRef50_C4DV24 Predicted transcriptional regulator n=2 Tax=Actinomycetales RepID=C4DV24_9ACTO Length = 94 Score = 73.1 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---K 122 ++L +L + HGY +I+A++ + G G +YP L L+ + G + Sbjct: 1 MLLAVLESEPHHGYAIIEALKQRSGGELDVPTGTVYPALRRLERAGYLRSSWSNVGGRER 60 Query: 123 KQIALTEQGAQWLEENREQVE 143 + ALT G + L R Q Sbjct: 61 RTYALTGAGTKELAAQRGQWR 81 >UniRef50_Q2J4B8 Transcriptional regulator, PadR family n=59 Tax=Actinomycetales RepID=Q2J4B8_FRASC Length = 272 Score = 73.1 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT-----IRE 117 L L +L +LS HGYEL K + L + S G +YP L L +T Sbjct: 2 LELAVLALLSESPMHGYELRKRLAALLGAFHRFSYGSLYPCLRRLASAGYVTADDVGAAS 61 Query: 118 EEGGKK--QIALTEQGAQWLEE 137 GG+ LT +G + L + Sbjct: 62 RLGGRSRVVYTLTGEGKEKLAD 83 >UniRef50_D1BEF8 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BEF8_SANKS Length = 128 Score = 73.1 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L L +L+R +HGY +++ ++ G G +YP L+ L+ +T E Sbjct: 12 RGLLGTCALAVLARGSAHGYAVVQQLQAAGLGPIK--GGALYPVLNRLERDGAVTAEWRE 69 Query: 120 G----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 G G+K LT G LE R+ + + Sbjct: 70 GEGGPGRKVFTLTPDGRAHLESLRDGWGPFAQTVAGLLDA 109 >UniRef50_B5VZF2 Transcriptional regulator, PadR-like family n=1 Tax=Arthrospira maxima CS-328 RepID=B5VZF2_SPIMA Length = 184 Score = 73.1 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L L L +L R+ HGY L + +E + + G IYP L L+E+ I + EE G Sbjct: 2 LELSALGLLQREPLHGYRLKQRLELFMGSCISVNYGAIYPLLKRLEERGYIQVILEEAGD 61 Query: 122 ----KKQIALTEQGAQ-WLEENREQVEMIEERIKAR 152 +K +T G + WL + EQ + + ++R Sbjct: 62 AGSSRKVYGITAAGRERWLYKMLEQPQESWVKSRSR 97 >UniRef50_A5IWB9 Transcriptional regulator, PadR family n=35 Tax=Staphylococcus RepID=A5IWB9_STAA9 Length = 112 Score = 72.7 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 7/91 (7%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI--TIRE 117 G L IL ++++ +++GYE++ ++N S G IYP L L ++ + TI++ Sbjct: 9 KGLLDGAILGLIAQGETYGYEIMTKLKNQEFPEI--SEGSIYPVLMRLNKKGYVDTTIKK 66 Query: 118 EEGG---KKQIALTEQGAQWLEENREQVEMI 145 G +K +T+ G + L+ + + + + Sbjct: 67 SSNGGPRRKYYTITDSGLKELKVFKSKWQAL 97 >UniRef50_Q9RD92 Putative uncharacterized protein SCO2859 n=1 Tax=Streptomyces coelicolor RepID=Q9RD92_STRCO Length = 125 Score = 72.7 bits (177), Expect = 7e-12, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 6/91 (6%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 R G L +L ++ +G EL+ A+E G S G +YP L L+ + Sbjct: 9 QARAAAQLRKGVLEYCVLALMRDRPRYGVELLHALEE--SGALATSQGTVYPLLSRLRRE 66 Query: 111 SLITIREEEGG----KKQIALTEQGAQWLEE 137 L+T +E ++ ALT G L+E Sbjct: 67 DLVTTTWQESASGPPRRYYALTATGRAALDE 97 >UniRef50_Q022R8 Transcriptional regulator, PadR family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022R8_SOLUE Length = 108 Score = 72.7 bits (177), Expect = 7e-12, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 4/96 (4%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE- 118 G L L++L +L HGY + + I L+ G +YP L + + + E Sbjct: 8 PGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGWVQSEWEL 67 Query: 119 -EGGKKQ--IALTEQGAQWLEENREQVEMIEERIKA 151 E ++ LT G + L + + I++ Sbjct: 68 SETKRRVRSYRLTAAGRKQLAAELAGYDQVNRAIQS 103 >UniRef50_B2TNP2 Lineage-specific thermal regulator protein n=1 Tax=Clostridium botulinum B str. Eklund 17B RepID=B2TNP2_CLOBB Length = 141 Score = 72.7 bits (177), Expect = 7e-12, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 4/89 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT---IREE 118 +L ++IL+++ R D +GY +IK + ++G + G IYP L L+ ++L+ IRE Sbjct: 41 DLEILILELIQRKDMYGYAIIKELGIKSKGTFLMQEGEIYPILHCLEGKALLESYWIRES 100 Query: 119 EG-GKKQIALTEQGAQWLEENREQVEMIE 146 + KK LT +G ++L+ E + I+ Sbjct: 101 DNIDKKYYRLTRRGREYLKFRAEDTKNIK 129 >UniRef50_Q9V0W9 Putative uncharacterized protein n=2 Tax=Pyrococcus RepID=Q9V0W9_PYRAB Length = 132 Score = 72.7 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 8/111 (7%) Query: 95 PSPGVIYPTLDFLQEQSLI-TIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 PSPG IYP L L++ LI +I E + KK ++TE+G ++LEE++E++ E ++ Sbjct: 13 PSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEELREALELVEKFK 72 Query: 154 VGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 + L + K V D+ + +S+ Q + + I + Sbjct: 73 EFSNLGG-------RELAKVVKDILDSIDKLSEEQKEALAFEISEFTRRVR 116 >UniRef50_C5A240 Transcription regulator, PadR-like family n=7 Tax=Thermococcaceae RepID=C5A240_THEGJ Length = 113 Score = 72.7 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 7/92 (7%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG---- 120 L IL +L + YEL + I+ + P+ Y L L++ + + +EG Sbjct: 19 LYILKLLKERPMYAYELKQEIKKAFG--FEPATVSSYVVLYKLEKDGYVKAKWQEGLSGK 76 Query: 121 -GKKQIALTEQGAQWLEENREQVEMIEERIKA 151 +K LT QG + LEE +E ++K Sbjct: 77 PSRKYYELTPQGEKLLEEGLAFLEETLSKLKG 108 >UniRef50_A6CPP9 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPP9_9BACI Length = 134 Score = 72.7 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 6/81 (7%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT----I 115 G L IL ++ ++GYEL + T+G + S G IYP L LQ++ LI Sbjct: 24 KGILEGCILAVIEESPTYGYELYVKLA--TKGMDSVSEGSIYPILLRLQKEGLIKGKMQK 81 Query: 116 REEEGGKKQIALTEQGAQWLE 136 +K +LTE+G LE Sbjct: 82 SASGPNRKYYSLTEEGKAALE 102 >UniRef50_C3RLL4 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RLL4_9MOLU Length = 105 Score = 72.3 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 IL +L+ HGYE++ I +T G +Y L Q I + E KK Sbjct: 14 FYILVVLN-VPRHGYEIMNEIMRITNDEIRVGAGTLYTLLSRFQNDGYIELVSEIDRKKI 72 Query: 125 IALTEQGAQWLEENREQVEM 144 +T+ G L+E + ++EM Sbjct: 73 YQITKIGKYKLQEEKRKLEM 92 >UniRef50_Q5WJB0 PadR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WJB0_BACSK Length = 107 Score = 72.3 bits (176), Expect = 9e-12, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 4/101 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L L+IL +S+ D +G ++K I + + Y S G +Y L L+++ L++ + Sbjct: 7 KGNLDLIILAHVSKTDDYGGAIVKKIYDESNQQYKMSEGTLYSLLKRLEKKGLLSSYWGD 66 Query: 120 ----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 G ++ ++T+ G +E E I + I+ G Sbjct: 67 ETNGGRRRYYSITDAGKVTFKEKLESWRSINKMIENSIRGG 107 >UniRef50_C1A3M6 PadR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3M6_GEMAT Length = 117 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 +R +G L ++IL +S HGY + + I+ +T G + G +YP L+ L + T Sbjct: 13 RRELPNGTLEMLILKTISVGTMHGYGIAQHIQRVTDGVLSAEQGSLYPALERLLNKGHAT 72 Query: 115 IREEE--GGK--KQIALTEQGAQWLEENR---EQVEMIEERI 149 + + G+ + +T G + L EQV + ER+ Sbjct: 73 AKWAQTSTGRQARIYTITASGRKQLAARMADYEQVSLAIERL 114 >UniRef50_A7VRI9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRI9_9CLOT Length = 110 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 8/98 (8%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR- 116 F G L + +L +L D +GY++ + + S G +YP L L+++ ++ Sbjct: 5 FKKGVLEMCVLVMLESGDRYGYDIANELSQ----SIAISNGTVYPILRRLKQEEYVSSYL 60 Query: 117 -EEEGG--KKQIALTEQGAQWLEENREQVEMIEERIKA 151 E GG +K A+T QG + + + + ER+ A Sbjct: 61 VESPGGAPRKYYAITPQGKRLADSLKTEWLSFSERVTA 98 >UniRef50_P94443 Negative transcription regulator padR n=5 Tax=Bacillus RepID=PADR_BACSU Length = 182 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 11/127 (8%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L+ IL +L + + GY++ + ++ IYP L L ++ IT R G Sbjct: 4 LKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGT 63 Query: 122 ---KKQIALTEQGAQWLEE----NREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 KK LT+ G Q L + ++ E +++ + + + A D FK Sbjct: 64 KLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISC---LSRQEASDLFKDQ 120 Query: 175 LDLRVNQ 181 L R + Sbjct: 121 LQKRQAK 127 >UniRef50_C7IM16 Transcriptional regulator, PadR-like family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IM16_9CLOT Length = 190 Score = 72.3 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 7/137 (5%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG--- 121 +IL +L+ +DS GY+L K I+ + + G +YPTL L++ ++T R E Sbjct: 9 FIILGLLNHEDSSGYDLKKKIDYMISRFWEVGYGQLYPTLSQLEKGGMVTKRTGENSKGP 68 Query: 122 -KKQIALTEQGAQWLEE---NREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 K ++T +G + L+E E + I + + + ++NFK Sbjct: 69 EKSVYSITAKGREVLKEWLSVPGAKEYTKYEILLKLFFGNMVSYRENVERIENFKERHIN 128 Query: 178 RVNQSDISDAQIKKIIA 194 + + ++K+I Sbjct: 129 DLKMIQMYKTNLEKVIE 145 >UniRef50_Q2B5E4 Putative uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B5E4_9BACI Length = 210 Score = 71.9 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%) Query: 67 ILDILSRDDSHGYELIKAIENLTQG-NYTPSPGVIYPTLDFLQEQSLITIREEE---GGK 122 +L +LS S GY++ E+ G + S G IYP L L+E+ + E+E K Sbjct: 14 LLAVLSFWPSSGYDIKSEFEHKAAGLYWGMSYGSIYPKLKKLEEEGYVYSMEKEENGRNK 73 Query: 123 KQIALTEQGAQWLEE 137 K LTE+G Q EE Sbjct: 74 KLYELTEKGWQEFEE 88 >UniRef50_Q635P9 Transcriptional regulator, PadR family n=92 Tax=Firmicutes RepID=Q635P9_BACCZ Length = 110 Score = 71.9 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 6/105 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L +L I+S + +GYE+ + + G S G IYP L +Q++ I +E Sbjct: 8 KGILEGCLLAIISEGEIYGYEMSEKLAK--YGFTMASEGSIYPLLIRMQKEGFIKSVMKE 65 Query: 120 G----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 +K LTE G L+E ++ E ++ ++ G R+ Sbjct: 66 SPSGPKRKYYTLTEDGEDALDEFMDRWEAMQSSVERLLEGKGRRR 110 >UniRef50_A3DMJ9 Transcriptional regulator, PadR family n=1 Tax=Staphylothermus marinus F1 RepID=A3DMJ9_STAMF Length = 130 Score = 71.9 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%) Query: 56 RFFGHGELRLVILDILSR-DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G ++IL +L + +GY++ I+ L+ PS IY TL + + LI Sbjct: 11 KSLRTGFYTVIILGLLKKHGPLYGYKIKSLIKQLSNNTLNPSESTIYETLKNMDKNKLIK 70 Query: 115 IREEEGG----KKQIALTEQGAQWLEENREQVEMIEERI 149 E +K +T++G + LE R ++E I E I Sbjct: 71 SYWTESNLGPPRKYYEITDKGLKTLETLRVELEKIIETI 109 >UniRef50_UPI000196A9C2 hypothetical protein CATMIT_00222 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9C2 Length = 112 Score = 71.6 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 L ++ L ILS D +GYE+ +I+ LT G G +YP L ++ I+ ++ GK Sbjct: 11 LEMLFLKILSIRDCYGYEITHSIKELTNGKIDIKEGSMYPVLYKFEDLGYISSEKKLVGK 70 Query: 123 K----QIALTEQGAQWLE 136 + L G ++LE Sbjct: 71 RMTRIYYHLEPSGKEYLE 88 >UniRef50_B0TAS3 Transcriptional regulator, padr family, putative n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAS3_HELMI Length = 159 Score = 71.6 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 9/114 (7%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 GGGR G +L L + +HGYEL++ +E + + P P VIY L L+ Sbjct: 1 MGGGRSDSLVFPG-----VLLSLRQRPAHGYELMEKLEQMHFVSALPDPAVIYRYLRRLE 55 Query: 109 EQSLITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 E+ ++ R E G +K +LT +G +L+ ++ + ++A A Sbjct: 56 EEGMVESRLEPGQGGPARKVYSLTAEGESYLQAWVIRIGKQKNDLEAFLQAAER 109 >UniRef50_A7G0W2 Transcriptional regulator, PadR family n=9 Tax=Firmicutes RepID=A7G0W2_CLOBH Length = 106 Score = 71.6 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 4/95 (4%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G + ++IL ++++DD +GY++ K I+ + Y+ G +YP L L+ + LI ++ Sbjct: 7 KGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLIKSYWKD 66 Query: 120 ----GGKKQIALTEQGAQWLEENREQVEMIEERIK 150 G +K ++T G L+E Q + I + I Sbjct: 67 NDLSGKRKYYSITPLGKSVLKEKLAQWDNITKLIT 101 >UniRef50_D1BL27 Transcriptional regulator, PadR-like family n=5 Tax=Firmicutes RepID=D1BL27_VEIPT Length = 109 Score = 71.6 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 8/92 (8%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G + +++L +L++DD +GYE++ I S G IYP + L+++ + Sbjct: 5 LKKGVMDMLVLALLTQDDRYGYEIVSTISE----YIEISEGTIYPLFNRLKKEKYVETYL 60 Query: 118 EEG----GKKQIALTEQGAQWLEENREQVEMI 145 +E +K +T G + R++ + Sbjct: 61 KESSTGPSRKYYHITADGRAAYNQMRQEWDEF 92 >UniRef50_C7REA3 Transcriptional regulator, PadR-like family n=5 Tax=Anaerococcus RepID=C7REA3_ANAPD Length = 108 Score = 71.6 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 6/81 (7%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI----TI 115 G + VIL I+ ++++GYE+++ ++N G Y + G +YP L L ++ I Sbjct: 8 KGVIEGVILHIIKNNETYGYEIVEELKN--SGFYAMTEGTVYPILQRLSKKGYIFGAYKK 65 Query: 116 REEEGGKKQIALTEQGAQWLE 136 +K ++ +G +L+ Sbjct: 66 STIGPKRKYYYISPKGRDYLD 86 >UniRef50_B5YBF9 Transcriptional regulator, PadR family, putative n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YBF9_DICT6 Length = 124 Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 14/124 (11%) Query: 49 RGGGRRQRF--FGHGE-LRLVILDILSRDDSHGYELIKAIENLT------QGNYTPSPGV 99 RG GR Q+ F G LR +L LS+ + HGYEL+ I+ +G G Sbjct: 2 RGFGRWQKGMGFAPGFWLRAFVLVALSKKELHGYELLNMIDEYFPEFCFCKGLSGMGTG- 60 Query: 100 IYPTLDFLQEQSLITIREEEG---GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 Y L L+ + LI R E G K+ +LT +G + EE E V+ +++RI+ A Sbjct: 61 -YRILRMLEMEGLIKSRWETGEGPAKRVYSLTSEGEKAKEEILEYVKEMKDRIERFLEFA 119 Query: 157 ALRQ 160 ++ Sbjct: 120 GGKE 123 >UniRef50_C1QEA4 Transcriptional regulator, PadR family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QEA4_9SPIR Length = 109 Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI---- 115 G + V+L L +DS+GYEL K I + T G Y + +Y + L+ + LI Sbjct: 9 RGHIDAVVLHFLKDNDSYGYELSKLITDKTNGEYEINGQTLYSAIRRLEGKKLIESYWGN 68 Query: 116 REEEGGKKQIALTEQGAQWLEENREQV 142 + G +K +TE+G +L+E E Sbjct: 69 ESQGGRRKYYKITEEGKSFLKEETEIW 95 >UniRef50_P20187 Uncharacterized 37.1 kDa protein in transposon TN4556 n=1 Tax=Streptomyces fradiae RepID=YT37_STRFR Length = 345 Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 + ++++L L+ HGY + AIE ++ + PG +Y L L+ + L+ EE+G Sbjct: 5 DAQMLVLCALADGPLHGYAINAAIEQVSG--HRLGPGSLYGALARLEAKQLVRPLEEKGR 62 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR 159 ++ LT G + LE + + R+ V + Sbjct: 63 QRPFCLTPAGRELLEREAHSMARLSGRVFESAVPDEVS 100 >UniRef50_D1Y9J2 Transcriptional regulator, PadR family n=2 Tax=Propionibacterium acnes RepID=D1Y9J2_PROAC Length = 191 Score = 71.2 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 5/122 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI-TIREEEGG 121 ++ IL +L+ HGYE+ + T + + G +Y TLD L+ L E G Sbjct: 3 IKFAILALLAEKPRHGYEIKNEFDRRTNHTWPLNIGQVYTTLDRLERDGLCYRGEETPDG 62 Query: 122 KKQIALTEQGAQWLEENREQ----VEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 + ++ +G + + + + AA ++ + + + + Sbjct: 63 RVIATISPKGREEVRRWFTTPIAPANPPRNELAIKIALAATSKDVDVATLIQDQRHATMH 122 Query: 178 RV 179 ++ Sbjct: 123 QL 124 >UniRef50_B5I6L9 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I6L9_9ACTO Length = 126 Score = 70.8 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 4/101 (3%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG--- 121 +L L+ HGY +++ +E L+ G G +Y LD L +LI + EE Sbjct: 6 FFVLTALADQPRHGYGILREVEELSGGAVQMRVGTLYGVLDRLTADALIVLDREEVQQGR 65 Query: 122 -KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 ++ LT++G L E++ K R Sbjct: 66 LRRYYRLTDEGTAALTAEAERLAAGASAAKKRIAEGRRTPA 106 >UniRef50_C7PGF5 Transcriptional regulator, PadR-like family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PGF5_CHIPD Length = 111 Score = 70.8 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 4/94 (4%) Query: 60 HGELRLVILDILSRD-DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI---TI 115 G + ++IL +L +GYE+ + ++NLT+G S G +YPTL L+ ++ I Sbjct: 8 KGTIEIIILKLLVEKGSMYGYEITQQVKNLTKGKIVISEGTLYPTLHKLEAIGVLCTEII 67 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 +K ++E G +++ + Sbjct: 68 HIGRRQRKYYQISEAGKDISASKMQELSSFLHSL 101 >UniRef50_Q1IKN6 Transcriptional regulator, PadR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKN6_ACIBL Length = 125 Score = 70.8 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%) Query: 45 GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTL 104 + G R + G L + IL L + ++G E+I+ +E +Q G IYP L Sbjct: 4 AKRDNGEDRWEAQLRKGALEMAILATLWQSKAYGLEIIRTLEERSQLVLA--EGTIYPIL 61 Query: 105 DFLQEQSLITIREEEGG----KKQIALTEQGAQWLEENREQV 142 L+E + +T E +K ALT+ G + L++ E Sbjct: 62 SRLKEDAFLTSEWVEADAGHPRKYYALTKAGRERLQKMAEAW 103 >UniRef50_C0ZHM5 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHM5_BREBN Length = 177 Score = 70.8 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE---- 117 +++ +IL LS + GY++ +A N Y S G IYP L L+E+ +T +E Sbjct: 2 DVKTIILGFLSYGEMSGYDIKQAFTNSIGFFYDASFGAIYPALRKLEEEGFVTKQEIIQS 61 Query: 118 EEGGKKQIALTEQGAQ 133 + K +TE G Q Sbjct: 62 GKPNKILYRITEAGKQ 77 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P64588 Uncharacterized protein yqjI n=110 Tax=Enterobac... 209 5e-53 UniRef50_B8GI45 Transcriptional regulator, PadR-like family n=2 ... 155 7e-37 UniRef50_C1F449 Transcriptional regulator, PadR family n=1 Tax=A... 148 1e-34 UniRef50_B4ETU0 PadR-family transcriptional regulator n=6 Tax=En... 146 5e-34 UniRef50_D2LBL1 Transcriptional regulator, PadR-like family n=1 ... 144 2e-33 UniRef50_C6XLJ9 Transcriptional regulator, PadR-like family n=1 ... 143 3e-33 UniRef50_A4TIE6 Transcriptional regulator, PadR family n=33 Tax=... 143 3e-33 UniRef50_C6RKQ8 PadR-family transcriptional regulator n=3 Tax=Ac... 139 5e-32 UniRef50_C8QBP6 Transcriptional regulator, PadR-like family n=1 ... 139 6e-32 UniRef50_D2PQ95 Transcriptional regulator, PadR-like family n=2 ... 135 8e-31 UniRef50_B1M5I1 Transcriptional regulator, PadR-like family n=7 ... 135 9e-31 UniRef50_D0XSD8 Transcriptional regulator, PadR-like family n=1 ... 135 1e-30 UniRef50_D1NZ20 Transcriptional regulator, PadR family n=1 Tax=P... 133 5e-30 UniRef50_C5CTL4 Transcriptional regulator, PadR-like family n=2 ... 132 1e-29 UniRef50_Q0S0L1 Possible transcriptional regulator n=3 Tax=Nocar... 131 1e-29 UniRef50_C7JI60 Transcriptional regulator PadR n=10 Tax=Proteoba... 131 2e-29 UniRef50_Q2L0P7 PadR-family transcriptional regulator n=1 Tax=Bo... 131 2e-29 UniRef50_B2PUN1 Putative uncharacterized protein n=1 Tax=Provide... 130 2e-29 UniRef50_A5FQF6 Transcriptional regulator, PadR family n=2 Tax=D... 130 2e-29 UniRef50_D1AC56 Transcriptional regulator, PadR-like family n=1 ... 130 3e-29 UniRef50_Q0FKV2 Transcriptional Regulator, PadR-like family prot... 130 4e-29 UniRef50_C5SJF5 Transcriptional regulator, PadR-like family n=1 ... 128 1e-28 UniRef50_C3JSU7 Transcriptional regulator, PadR family n=1 Tax=R... 126 5e-28 UniRef50_UPI000050FEE8 transcriptional regulator n=1 Tax=Breviba... 126 5e-28 UniRef50_B2IYD3 Transcriptional regulator, PadR-like family n=4 ... 125 7e-28 UniRef50_D1PPF6 Transcriptional regulator, PadR family n=1 Tax=S... 125 8e-28 UniRef50_B2I0Y1 Predicted transcriptional regulator n=12 Tax=Aci... 125 1e-27 UniRef50_A5EFD0 Transcriptional regulator, PadR family n=2 Tax=B... 124 2e-27 UniRef50_C8XGD0 Transcriptional regulator, PadR-like family n=1 ... 123 2e-27 UniRef50_A3IWR1 Putative uncharacterized protein n=1 Tax=Cyanoth... 123 4e-27 UniRef50_A9GIC6 Transcriptional regulator, PadR family n=1 Tax=S... 123 4e-27 UniRef50_C8Q5D9 Transcriptional regulator, PadR-like family n=1 ... 122 6e-27 UniRef50_Q1AYM9 Transcriptional regulator, PadR family n=1 Tax=R... 122 8e-27 UniRef50_Q21BY2 Transcriptional regulator, PadR family n=5 Tax=A... 122 8e-27 UniRef50_A8IL86 Transcriptional regulator n=8 Tax=Rhizobiales Re... 121 1e-26 UniRef50_D2M8Y5 Transcriptional regulator, PadR-like family n=1 ... 120 3e-26 UniRef50_A0Q9V4 Transcriptional regulator, PadR family protein n... 120 4e-26 UniRef50_C5QNA0 PadR family transcriptional regulator n=4 Tax=St... 119 5e-26 UniRef50_A6SZ38 Transcriptional regulator n=1 Tax=Janthinobacter... 118 1e-25 UniRef50_UPI0001C3245B transcriptional regulator, PadR-like fami... 117 2e-25 UniRef50_Q2G591 Transcriptional regulator, PadR family n=2 Tax=S... 117 2e-25 UniRef50_B8H9F8 Transcriptional regulator, PadR-like family n=3 ... 117 2e-25 UniRef50_A0RKG2 Transcriptional regulator, PadR family n=50 Tax=... 116 3e-25 UniRef50_A1R8I7 Putative transcriptional regulator, PadR family ... 116 5e-25 UniRef50_B4W6A1 Transcriptional regulator, PadR family protein n... 115 8e-25 UniRef50_B2Q1E3 Putative uncharacterized protein n=3 Tax=Provide... 115 1e-24 UniRef50_C8SSA8 Transcriptional regulator, PadR-like family n=2 ... 114 2e-24 UniRef50_B8HG13 Transcriptional regulator, PadR-like family n=4 ... 113 4e-24 UniRef50_D2B5F1 Transcriptional regulator protein-like protein n... 112 6e-24 UniRef50_C8VZL9 Transcriptional regulator, PadR-like family n=2 ... 112 8e-24 UniRef50_Q47QT2 Transcriptional regulator, PadR family n=2 Tax=A... 111 1e-23 UniRef50_B9J7W6 Transcriptional regulator protein n=9 Tax=Rhizob... 111 1e-23 UniRef50_C1RLJ9 Transcriptional regulator, PadR family n=1 Tax=C... 111 2e-23 UniRef50_B6IW77 Transcriptional regulator, PadR family protein n... 111 2e-23 UniRef50_C6WET7 Transcriptional regulator, PadR-like family n=11... 111 2e-23 UniRef50_A6BF93 Putative uncharacterized protein n=1 Tax=Dorea l... 110 3e-23 UniRef50_C0H3S6 Putative DNA-binding protein ywzG n=5 Tax=Bacill... 110 3e-23 UniRef50_D1VPN8 Transcriptional regulator, PadR-like family n=1 ... 110 3e-23 UniRef50_Q4J6E8 Transcriptional regulator PadR-like family n=2 T... 110 4e-23 UniRef50_Q2RG05 Transcriptional regulator, PadR family n=2 Tax=C... 109 6e-23 UniRef50_A8M728 Transcriptional regulator, PadR-like family n=1 ... 109 7e-23 UniRef50_D1BI54 Predicted transcriptional regulator n=1 Tax=Sang... 109 8e-23 UniRef50_C3MJS4 Transcriptional regulator PadR family protein n=... 108 2e-22 UniRef50_D1YXU7 PadR-like family transcriptional regulator n=2 T... 107 2e-22 UniRef50_UPI000038E215 transcriptional regulator n=1 Tax=Ferropl... 107 2e-22 UniRef50_A4YE88 Transcriptional regulator, PadR family n=1 Tax=M... 107 3e-22 UniRef50_C0ZGN3 Putative transcriptional regulator n=3 Tax=Firmi... 107 3e-22 UniRef50_B4DB33 Transcriptional regulator, PadR-like family n=1 ... 106 3e-22 UniRef50_C6NX27 Transcriptional regulator, PadR-like family n=1 ... 106 3e-22 UniRef50_Q4C4V0 Transcriptional regulator PadR-like n=1 Tax=Croc... 106 4e-22 UniRef50_A1SQM2 Transcriptional regulator, PadR family n=1 Tax=N... 106 5e-22 UniRef50_A8LCR1 Transcriptional regulator, PadR-like family n=12... 106 6e-22 UniRef50_B2TFG8 Transcriptional regulator, PadR-like family n=67... 106 7e-22 UniRef50_B5GFD7 Putative uncharacterized protein n=4 Tax=Strepto... 105 8e-22 UniRef50_B0R6W2 Putative uncharacterized protein n=2 Tax=Halobac... 105 1e-21 UniRef50_B8I8C9 Transcriptional regulator, PadR-like family n=12... 105 1e-21 UniRef50_A5IKC3 Transcriptional regulator, PadR family n=5 Tax=T... 105 1e-21 UniRef50_A7HPG2 Transcriptional regulator, PadR-like family n=1 ... 105 1e-21 UniRef50_C5C5Y5 Transcriptional regulator, PadR-like family n=1 ... 105 1e-21 UniRef50_Q2NCW1 Putative transcriptional regulator n=4 Tax=cellu... 104 2e-21 UniRef50_UPI0001C35727 PadR-like family transcriptional regulato... 104 2e-21 UniRef50_D2EEC8 Transcriptional regulator, PadR family n=1 Tax=C... 104 2e-21 UniRef50_Q0W129 Predicted transcription regulator (PadR-like fam... 103 3e-21 UniRef50_B0RN88 Transcriptional regulator, PadR-like family n=5 ... 103 3e-21 UniRef50_Q465T5 Transcriptional regulator, PadR family n=1 Tax=M... 102 6e-21 UniRef50_B4SHM6 Transcriptional regulator, PadR-like family n=3 ... 102 8e-21 UniRef50_A9AWY2 Transcriptional regulator, PadR-like family n=1 ... 102 8e-21 UniRef50_C7QEY5 Transcriptional regulator, PadR-like family n=1 ... 102 8e-21 UniRef50_C2BYK8 PadR family transcriptional regulator n=3 Tax=Ba... 101 1e-20 UniRef50_A3DGN6 Transcriptional regulator, PadR family n=4 Tax=C... 101 1e-20 UniRef50_A6DRV1 Putative uncharacterized protein n=1 Tax=Lentisp... 101 1e-20 UniRef50_C9XPK8 Padr-family transcriptional regulator n=97 Tax=c... 101 1e-20 UniRef50_C2AQN6 Predicted transcriptional regulator n=1 Tax=Tsuk... 101 2e-20 UniRef50_D1PN95 Transcriptional regulator, PadR family protein n... 101 2e-20 UniRef50_C9D3S1 Transcriptional regulator n=1 Tax=Silicibacter s... 101 2e-20 UniRef50_A9WKS9 Transcriptional regulator PadR-like family n=1 T... 101 2e-20 UniRef50_C7LZY3 Transcriptional regulator, PadR-like family n=1 ... 101 2e-20 UniRef50_A6BZG9 Putative uncharacterized protein n=1 Tax=Plancto... 100 3e-20 UniRef50_Q9RVI7 Pex-related protein n=1 Tax=Deinococcus radiodur... 100 3e-20 UniRef50_C7P8R4 Transcriptional regulator, PadR-like family n=1 ... 100 3e-20 UniRef50_C7QKF8 Transcriptional regulator, PadR-like family n=4 ... 100 3e-20 UniRef50_B8FYD5 Transcriptional regulator, PadR-like family n=22... 100 3e-20 UniRef50_Q97A48 Putative uncharacterized protein TVG0986825 n=1 ... 100 6e-20 UniRef50_B9KC28 Transcriptional regulator, PadR family n=1 Tax=T... 99 7e-20 UniRef50_Q633A4 Transcriptional regulator, PadR family n=18 Tax=... 99 7e-20 UniRef50_A5IWB9 Transcriptional regulator, PadR family n=35 Tax=... 99 8e-20 UniRef50_C1FK14 Transcriptional regulator, PadR family n=4 Tax=C... 99 8e-20 UniRef50_B5IBP0 Transcriptional regulator, PadR family, putative... 99 9e-20 UniRef50_Q4ZPG6 Transcriptional regulator PadR-like n=13 Tax=Pse... 99 9e-20 UniRef50_B9XHE1 Transcriptional regulator, PadR-like family n=2 ... 99 9e-20 UniRef50_D1A5M7 Transcriptional regulator, PadR-like family n=1 ... 99 9e-20 UniRef50_Q1IMK2 Transcriptional regulator, PadR family n=9 Tax=A... 99 9e-20 UniRef50_Q025E2 Transcriptional regulator, PadR family n=4 Tax=A... 99 1e-19 UniRef50_C7QDM4 Transcriptional regulator, PadR-like family n=3 ... 98 1e-19 UniRef50_Q47SG6 Transcriptional regulator, PadR family n=1 Tax=T... 98 1e-19 UniRef50_D1A757 Transcriptional regulator, PadR-like family n=2 ... 98 1e-19 UniRef50_Q46CE0 Transcriptional regulator, PadR family n=2 Tax=c... 98 2e-19 UniRef50_D1BL27 Transcriptional regulator, PadR-like family n=5 ... 98 2e-19 UniRef50_Q0W4V9 Putative transcription regulator (PadR-like fami... 98 2e-19 UniRef50_A4CA37 Putative uncharacterized protein n=1 Tax=Pseudoa... 98 2e-19 UniRef50_C2D961 Possible transcriptional regulator n=2 Tax=Bacte... 98 2e-19 UniRef50_Q9RD92 Putative uncharacterized protein SCO2859 n=1 Tax... 98 2e-19 UniRef50_C8WGP1 Transcriptional regulator, PadR-like family n=1 ... 98 2e-19 UniRef50_Q722V1 Transcriptional regulator, PadR family n=16 Tax=... 98 2e-19 UniRef50_Q0TT89 Transcriptional regulator, PadR family n=9 Tax=C... 98 2e-19 UniRef50_A8FCB2 PadR family transcriptional regulator n=7 Tax=Ba... 98 2e-19 UniRef50_C9L889 Transcriptional regulator, PadR family n=3 Tax=C... 98 2e-19 UniRef50_A6C2L2 Transcriptional regulator, PadR-like family prot... 98 2e-19 UniRef50_Q8CV09 Hypothetical conserved protein n=1 Tax=Oceanobac... 97 3e-19 UniRef50_D2QHL5 Transcriptional regulator, PadR-like family n=1 ... 97 3e-19 UniRef50_C6X192 Transcriptional regulator, PadR family n=2 Tax=F... 97 3e-19 UniRef50_A7IME8 Transcriptional regulator, PadR-like family n=2 ... 97 3e-19 UniRef50_B9JLC2 Transcriptional regulator protein n=39 Tax=cellu... 97 3e-19 UniRef50_Q035B6 Transcriptional regulator, PadR family n=28 Tax=... 97 3e-19 UniRef50_C0VX09 PadR family transcriptional regulator n=5 Tax=Co... 97 4e-19 UniRef50_B5IFX4 Transcriptional regulator, PadR family protein n... 97 4e-19 UniRef50_A7G0W2 Transcriptional regulator, PadR family n=9 Tax=F... 97 4e-19 UniRef50_A8F9K7 Transcriptional regulator n=9 Tax=Bacteria RepID... 97 4e-19 UniRef50_Q1IIL5 Transcriptional regulator, PadR family n=3 Tax=A... 97 4e-19 UniRef50_D1PMS6 Transcriptional regulator, PadR family n=1 Tax=S... 97 5e-19 UniRef50_C5NUR7 PadR family transcriptional regulator n=1 Tax=Ge... 97 5e-19 UniRef50_Q634X8 Transcriptional regulator, PadR family n=59 Tax=... 97 5e-19 UniRef50_C3L0X0 PadR-family transcriptional regulator n=2 Tax=Cl... 96 6e-19 UniRef50_Q8NLG3 Predicted transcriptional regulators n=4 Tax=Cor... 96 6e-19 UniRef50_A7HN08 Transcriptional regulator, PadR-like family n=1 ... 96 6e-19 UniRef50_A5N8T7 Transcriptional regulator n=14 Tax=Firmicutes Re... 96 7e-19 UniRef50_C0H3Y4 Putative DNA-binding protein yizB n=1 Tax=Bacill... 96 7e-19 UniRef50_Q635P9 Transcriptional regulator, PadR family n=92 Tax=... 96 8e-19 UniRef50_Q3SN82 Transcriptional regulator, PadR family n=3 Tax=N... 96 8e-19 UniRef50_D0LFT7 Transcriptional regulator, PadR-like family n=1 ... 96 8e-19 UniRef50_Q1IKN6 Transcriptional regulator, PadR family n=1 Tax=C... 96 9e-19 UniRef50_A6CPP9 Putative uncharacterized protein n=1 Tax=Bacillu... 96 9e-19 UniRef50_A2RJ61 Transcriptional regulator, PadR-like family n=13... 95 1e-18 UniRef50_Q5WJB0 PadR family transcriptional regulator n=1 Tax=Ba... 95 1e-18 UniRef50_D2PES9 Transcriptional regulator PadR family protein n=... 95 1e-18 UniRef50_C5BZX9 Transcriptional regulator, PadR-like family n=2 ... 95 1e-18 UniRef50_A4G020 Transcriptional regulator, PadR family n=4 Tax=M... 95 1e-18 UniRef50_A0NMS3 Putative uncharacterized protein n=1 Tax=Labrenz... 95 1e-18 UniRef50_C3B6A2 Transcriptional regulator n=3 Tax=Bacillales Rep... 95 1e-18 UniRef50_A1R446 Putative transcriptional regulator, PadR family ... 95 1e-18 UniRef50_D1BE53 Transcriptional regulator, PadR family n=1 Tax=S... 95 1e-18 UniRef50_C7IM16 Transcriptional regulator, PadR-like family n=1 ... 95 1e-18 UniRef50_A7VRI9 Putative uncharacterized protein n=1 Tax=Clostri... 95 1e-18 UniRef50_D1YZ73 PadR-like family transcriptional regulator n=2 T... 95 1e-18 UniRef50_B1L3Y8 Transcriptional regulator, PadR-like family n=1 ... 95 1e-18 UniRef50_C8WPF3 Transcriptional regulator, PadR-like family n=12... 95 2e-18 UniRef50_C5CF63 Transcriptional regulator, PadR-like family n=1 ... 95 2e-18 UniRef50_C8Q356 Transcriptional regulator, PadR-like family n=1 ... 95 2e-18 UniRef50_Q022R8 Transcriptional regulator, PadR family n=2 Tax=C... 95 2e-18 UniRef50_C4L5F0 Transcriptional regulator, PadR-like family n=8 ... 95 2e-18 UniRef50_D1BAH9 Transcriptional regulator, PadR family n=1 Tax=S... 95 2e-18 UniRef50_B9LRB4 Transcriptional regulator, PadR-like family n=4 ... 95 2e-18 UniRef50_C0GEI8 Transcriptional regulator, PadR-like family n=2 ... 95 2e-18 UniRef50_D1BEF8 Predicted transcriptional regulator n=1 Tax=Sang... 95 2e-18 UniRef50_Q2FNW6 Transcriptional regulator, PadR family n=1 Tax=M... 95 2e-18 UniRef50_Q97LI9 Predicted transcriptional regulator n=2 Tax=Clos... 95 2e-18 UniRef50_A5HXZ4 PadR-family transcriptional regulator n=15 Tax=C... 95 2e-18 UniRef50_Q73NW7 Transcriptional regulator, PadR family n=1 Tax=T... 95 2e-18 UniRef50_Q977Z7 Putative uncharacterized protein TVG1573729 n=2 ... 95 2e-18 UniRef50_Q5WAR4 PadR family transcriptional regulator n=2 Tax=Ba... 94 2e-18 UniRef50_Q01N73 Transcriptional regulator, PadR family n=1 Tax=C... 94 2e-18 UniRef50_D1C8Q3 Transcriptional regulator, PadR-like family n=1 ... 94 2e-18 UniRef50_C1YU51 Predicted transcriptional regulator n=1 Tax=Noca... 94 2e-18 UniRef50_C6J093 Transcriptional regulator PadR family protein n=... 94 3e-18 UniRef50_A8MBR3 Transcriptional regulator, PadR-like family n=1 ... 94 3e-18 UniRef50_Q17ZV3 PadR-family transcriptional regulator n=7 Tax=Cl... 94 3e-18 UniRef50_Q1IS64 Transcriptional regulator, PadR family n=2 Tax=A... 94 3e-18 UniRef50_Q01VZ7 Transcriptional regulator, PadR family n=5 Tax=A... 93 4e-18 UniRef50_D2LSP7 Transcriptional regulator, PadR-like family n=1 ... 93 4e-18 UniRef50_A7VGD7 Putative uncharacterized protein n=1 Tax=Clostri... 93 4e-18 UniRef50_UPI00016C509A Predicted transcriptional regulator n=1 T... 93 4e-18 UniRef50_C7QBA1 Transcriptional regulator, PadR-like family n=1 ... 93 4e-18 UniRef50_A6W6T2 Transcriptional regulator, PadR-like family n=1 ... 93 4e-18 UniRef50_C7IBX7 Transcriptional regulator, PadR-like family n=1 ... 93 4e-18 UniRef50_C1RQ14 Transcriptional regulator, PadR family n=3 Tax=A... 93 5e-18 UniRef50_A9A325 Transcriptional regulator, PadR-like family n=1 ... 93 5e-18 UniRef50_A8TFR8 Transcriptional regulator, PadR-like family n=1 ... 93 5e-18 UniRef50_C1A3M6 PadR family transcriptional regulator n=1 Tax=Ge... 93 6e-18 UniRef50_A2TYI9 Transcriptional regulator PadR-like family n=7 T... 93 6e-18 UniRef50_Q2RGC9 Transcriptional regulator, PadR family n=3 Tax=B... 93 6e-18 UniRef50_P94443 Negative transcription regulator padR n=5 Tax=Ba... 93 6e-18 UniRef50_Q02B04 Transcriptional regulator, PadR family n=5 Tax=C... 92 8e-18 UniRef50_Q9RT15 Putative uncharacterized protein n=1 Tax=Deinoco... 92 8e-18 UniRef50_Q1IKX7 Transcriptional regulator, PadR family n=2 Tax=A... 92 8e-18 UniRef50_Q03UK7 Transcriptional regulator, PadR family n=15 Tax=... 92 8e-18 UniRef50_C4F9Z1 Putative uncharacterized protein n=1 Tax=Collins... 92 9e-18 UniRef50_A4WHQ6 Transcriptional regulator, PadR family n=5 Tax=T... 92 1e-17 UniRef50_A8LAZ7 Transcriptional regulator, PadR-like family n=9 ... 92 1e-17 UniRef50_UPI000185C042 transcriptional regulator, PadR family n=... 92 1e-17 UniRef50_B7HT59 Transcriptional regulator, PadR family n=5 Tax=F... 92 1e-17 UniRef50_C2G3G3 PadR family transcriptional regulator n=2 Tax=Sp... 92 1e-17 UniRef50_C5RE17 Transcriptional regulator, PadR-like family n=2 ... 92 1e-17 UniRef50_A3DMJ9 Transcriptional regulator, PadR family n=1 Tax=S... 92 1e-17 UniRef50_D2B3D4 Transcriptional regulator, PadR-like family n=1 ... 92 1e-17 UniRef50_A3DFJ2 Transcriptional regulator, PadR family n=2 Tax=C... 92 1e-17 UniRef50_B6GB42 Putative uncharacterized protein n=2 Tax=Bacteri... 92 1e-17 UniRef50_A3TQ81 Transcriptional regulator, PadR family protein n... 92 1e-17 UniRef50_A3DGR1 Transcriptional regulator, PadR family n=40 Tax=... 92 1e-17 UniRef50_B2IKL6 Transcriptional regulator, PadR-like family n=2 ... 92 1e-17 UniRef50_B8FZV5 Transcriptional regulator, PadR-like family n=6 ... 92 2e-17 UniRef50_Q9RSP5 Putative uncharacterized protein n=1 Tax=Deinoco... 91 2e-17 UniRef50_A6WBU7 Transcriptional regulator, PadR-like family n=2 ... 91 2e-17 UniRef50_D0WM05 Transcriptional regulator, PadR family n=1 Tax=A... 91 2e-17 UniRef50_B8F979 Transcriptional regulator, PadR-like family n=1 ... 91 2e-17 UniRef50_P39044 Uncharacterized protein X n=4 Tax=Bacillaceae Re... 91 2e-17 UniRef50_B3ZXV3 Transcriptional regulator, PadR family n=2 Tax=B... 91 2e-17 UniRef50_Q1IHM4 Transcriptional regulator, PadR family n=5 Tax=B... 91 2e-17 UniRef50_C1QEA4 Transcriptional regulator, PadR family n=1 Tax=B... 91 2e-17 UniRef50_B7K746 Transcriptional regulator, PadR-like family n=3 ... 91 2e-17 UniRef50_B4RB07 Predicted transcriptional regulator n=8 Tax=Bact... 91 2e-17 UniRef50_D1Y9J2 Transcriptional regulator, PadR family n=2 Tax=P... 91 2e-17 UniRef50_C0ZHM5 Putative transcriptional regulator n=1 Tax=Brevi... 91 2e-17 UniRef50_A8SUL2 Putative uncharacterized protein n=1 Tax=Coproco... 91 2e-17 UniRef50_Q01ZV7 Transcriptional regulator, PadR family n=4 Tax=A... 91 2e-17 UniRef50_D1ACF2 Transcriptional regulator, PadR-like family n=1 ... 91 3e-17 UniRef50_B0P308 Putative uncharacterized protein n=1 Tax=Clostri... 91 3e-17 UniRef50_A8SIW9 Putative uncharacterized protein n=1 Tax=Parvimo... 90 3e-17 UniRef50_Q7NDS5 Glr4157 protein n=1 Tax=Gloeobacter violaceus Re... 90 3e-17 UniRef50_UPI0001C31834 transcriptional regulator, PadR-like fami... 90 3e-17 UniRef50_B9Y2R1 Putative uncharacterized protein n=1 Tax=Holdema... 90 3e-17 UniRef50_Q9YC94 Putative transcriptional regulator, PadR family ... 90 4e-17 UniRef50_C6VSB4 Transcriptional regulator, PadR-like family n=1 ... 90 4e-17 UniRef50_B2A0I7 Transcriptional regulator, PadR-like family n=1 ... 90 4e-17 UniRef50_C7REA3 Transcriptional regulator, PadR-like family n=5 ... 90 4e-17 UniRef50_A7VYN2 Putative uncharacterized protein n=1 Tax=Clostri... 90 4e-17 Sequences not found previously or not previously below threshold: UniRef50_C7IIU2 Transcriptional regulator, PadR-like family n=1 ... 94 2e-18 UniRef50_D2QIH5 Transcriptional regulator, PadR-like family n=1 ... 93 4e-18 UniRef50_C6W103 Transcriptional regulator, PadR-like family n=24... 92 1e-17 UniRef50_C1RLU7 Transcriptional regulator, PadR family n=2 Tax=M... 92 1e-17 UniRef50_A5FNI2 Transcriptional regulator, PadR family n=8 Tax=B... 91 3e-17 >UniRef50_P64588 Uncharacterized protein yqjI n=110 Tax=Enterobacteriaceae RepID=YQJI_ECOLI Length = 207 Score = 209 bits (532), Expect = 5e-53, Method: Composition-based stats. Identities = 207/207 (100%), Positives = 207/207 (100%) Query: 1 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH 60 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH Sbjct: 1 MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH 60 Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG Sbjct: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN Sbjct: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQLD 207 QSDISDAQIKKIIAVIDRAAFDITQLD Sbjct: 181 QSDISDAQIKKIIAVIDRAAFDITQLD 207 >UniRef50_B8GI45 Transcriptional regulator, PadR-like family n=2 Tax=Methanosphaerula palustris E1-9c RepID=B8GI45_METPE Length = 238 Score = 155 bits (393), Expect = 7e-37, Method: Composition-based stats. Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 7/206 (3%) Query: 6 EGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRF-----FGH 60 +G C E C+G + E G + HG G G F Sbjct: 35 QGFCDREYGSIGNRGCRGF-GDRELGGFNGRDPHGFGGHGGRDPRGFGGFGGGRGRLFDA 93 Query: 61 GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG 120 G+++L IL++LS S+GY++IK +E G Y PSPGVIYPTL L+E+ L T+ EG Sbjct: 94 GDIKLAILNLLSEQPSYGYQIIKTMEQRLAGGYAPSPGVIYPTLTMLEEEGLATVSL-EG 152 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 KK ++T +G Q+L+ + E+V+ + ER++ G ++P++ +A N + R+ Sbjct: 153 SKKVYSVTPEGMQYLQTHEERVKELFERLEEAGRGFQHGRSPELMKAFKNLHGAVMARLL 212 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 + + + QI I ++ AA I L Sbjct: 213 RGNATPEQISTIAETMNAAARTIDDL 238 >UniRef50_C1F449 Transcriptional regulator, PadR family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F449_ACIC5 Length = 191 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Query: 13 GQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILS 72 HE E+ H G G + + G G R+R F +GELRLVIL IL+ Sbjct: 4 RGHDHEDHPGRERHRGRHGGFGEYFGNFERGFG------GGRERMFDNGELRLVILQILA 57 Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGA 132 + S+GYE+IK IE G Y+PSPGV+YPTL L+E+ + EG KK+ A TEQG Sbjct: 58 KKPSYGYEIIKEIEEQLAGAYSPSPGVVYPTLTMLEEEGYAVVASTEGNKKRYAATEQGL 117 Query: 133 QWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKI 192 +L++N+ +E I R++ + PQ+ RA+ N K L +R +S QI+KI Sbjct: 118 AYLKQNQGILEGIGHRMEKMGKAYGRERAPQIMRAIMNLKFALKVRARSGKLSPEQIRKI 177 Query: 193 IAVIDRAAFDITQL 206 ID AA I ++ Sbjct: 178 AEAIDAAARVIDEV 191 >UniRef50_B4ETU0 PadR-family transcriptional regulator n=6 Tax=Enterobacteriaceae RepID=B4ETU0_PROMH Length = 271 Score = 146 bits (368), Expect = 5e-34, Method: Composition-based stats. Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 26/230 (11%) Query: 3 HHHEG----CCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQ--- 55 HH G CC E EG K + + H EHG CC G + G+R Sbjct: 32 QHHNGNNEHCCHGERGHHQEGHGKCCQQGEQSHEHNDHAEHG-CCHGEKQQEHGKRHGRG 90 Query: 56 ----------------RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGV 99 R F HG+LR+++L +++ SHGYE+I+ I+ + G Y PSPGV Sbjct: 91 CGAGKGKGRGQGRQLKRMFDHGDLRVLLLSMIAAKPSHGYEIIRGIDEASSGLYVPSPGV 150 Query: 100 IYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI--KARCVGAA 157 IYPTL L+EQ L+ E G+K ++T +G+ +L EN+E + I+ ++ A Sbjct: 151 IYPTLTLLEEQDLVVANIAEKGRKNYSITPEGSAFLAENQETEKNIQNKLAYARDLSQNA 210 Query: 158 LRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 + +++ A+ KAVL ++ +S + ++I +++ A I ++ Sbjct: 211 GGVSEEIEFAVGKLKAVLRHKLVLKQLSVEKAQRIAFILNEAVEKIEAIN 260 >UniRef50_D2LBL1 Transcriptional regulator, PadR-like family n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LBL1_RHOVA Length = 177 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%) Query: 33 HGHQHEHGQCCGG---RHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLT 89 GH G G G GR R G+LR ++LD++ HGYE+IKAIE+ Sbjct: 2 FGHHDRRGGSRHGGDHPFGGRRGRHGRPLEQGDLRWLVLDLIGEQPRHGYEIIKAIEDAF 61 Query: 90 QGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI 149 G YTPSPGVIYPTL L+E LI + E +G KK +LT+QG L ++V + R+ Sbjct: 62 NGAYTPSPGVIYPTLTLLEETGLI-VGETQGAKKLYSLTDQGRAELAARVQEVTAVRGRL 120 Query: 150 KARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + P+M RA+DN +A + +R+++ +S ++ I +DRAA +I + Sbjct: 121 EEARARFGANPAPEMIRAMDNLRAAVQVRLSKGPLSPEAVQVITGALDRAASEIER 176 >UniRef50_C6XLJ9 Transcriptional regulator, PadR-like family n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ9_HIRBI Length = 199 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 2/186 (1%) Query: 23 GEKSEHEHCGHGHQHEHGQCCGGRHG--RGGGRRQRFFGHGELRLVILDILSRDDSHGYE 80 + EH H H H+ G RH R G R+R F ELRLV+L +S + HGY+ Sbjct: 14 QDHKEHGHKHHRHRSVRRHKNGHRHASMRRNGGRRRVFDAAELRLVLLHFISTNPKHGYD 73 Query: 81 LIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENRE 140 LI+AIE + G+Y PSPGV+YP L L++ I+ ++EEGGKK ++T G L+ E Sbjct: 74 LIRAIEEHSGGSYAPSPGVVYPALSMLEDIGFISAQQEEGGKKAFSITPDGESELQTQSE 133 Query: 141 QVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAA 200 + +R+++ +KRA++N K L R+ QSD +DA I A+ID A Sbjct: 134 TTSSLLQRLESLASEHGRLNPAPVKRAMENIKTALRNRMTQSDATDATALDIAAIIDEAT 193 Query: 201 FDITQL 206 I +L Sbjct: 194 HKIERL 199 >UniRef50_A4TIE6 Transcriptional regulator, PadR family n=33 Tax=Enterobacteriaceae RepID=A4TIE6_YERPP Length = 226 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 1/191 (0%) Query: 15 PRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRD 74 C + + H E + GRGG R F HG+LR+V+L +L++ Sbjct: 17 EGQGHCGEKMRRGGRHNVMAEDAESARGGKHGRGRGGKM-HRLFEHGDLRVVLLALLNKT 75 Query: 75 DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQW 134 SHGYELIKAIE + G Y PSPGVIYPTL L+EQ +T G+K +T+ G Sbjct: 76 PSHGYELIKAIEEASSGLYVPSPGVIYPTLTLLEEQDFVTPVATGNGRKSYQITDAGKFE 135 Query: 135 LEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIA 194 L++N+ V++I R+ + A+ + +L + ++D++ Q+ +I Sbjct: 136 LQKNQAMVDVIFARLAQVNRHKEGNLAEGIADAMHRLRHILRSNMMRADLTPEQVARINT 195 Query: 195 VIDRAAFDITQ 205 + A I + Sbjct: 196 ALLAAVDTIEE 206 >UniRef50_C6RKQ8 PadR-family transcriptional regulator n=3 Tax=Acinetobacter RepID=C6RKQ8_ACIRA Length = 176 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 53/154 (34%), Positives = 88/154 (57%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ R F G ++L++L ++ + +GYE+IK+I L G Y+PS G IYPTL +L++ Sbjct: 17 RKSRLFESGHMKLLVLSLIEQAPRYGYEIIKSIGELVGGGYSPSTGTIYPTLSYLEDMQF 76 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 ++I + +G +KQ +T G L RE +E I R++ R Q + RA+ N K Sbjct: 77 VSIEKPDGDRKQYKITVTGINHLNGQREHLEHILGRLETRREIQNNDQYLDIYRAMANLK 136 Query: 173 AVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 L L++ + +++ I +I ID+AA DI+ L Sbjct: 137 TSLRLKLKNNALTEETIHQIAKSIDQAAVDISCL 170 >UniRef50_C8QBP6 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8QBP6_9ENTR Length = 179 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 62/182 (34%), Positives = 101/182 (55%), Gaps = 4/182 (2%) Query: 24 EKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIK 83 K + HG + C G R RR+R ++RL++L L++ D+HGYELIK Sbjct: 1 MKQHRDSPWHGDHAQRAFCAGARK----KRRERMLDASDIRLLMLHFLAQSDAHGYELIK 56 Query: 84 AIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVE 143 ++E L++G Y+PSPG+IYP L L+E I + + + +K L + G L ENRE V+ Sbjct: 57 SVEELSKGEYSPSPGIIYPNLTLLEETDAIRVVDAQESRKAYTLNDSGRALLAENRENVD 116 Query: 144 MIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 I R+ + + R P +++A+ N K L+ R+ Q +IS+ + +IA ++ AA I Sbjct: 117 TIIGRLTSLAILVNNRSIPAVEQAIHNIKFTLNHRLAQENISEEALDIVIAALNEAAEKI 176 Query: 204 TQ 205 + Sbjct: 177 AK 178 >UniRef50_D2PQ95 Transcriptional regulator, PadR-like family n=2 Tax=Actinomycetales RepID=D2PQ95_9ACTO Length = 230 Score = 135 bits (340), Expect = 8e-31, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 8/164 (4%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GG G G + +R G++R IL +L+ +GY++I+ + + G + PSPG IY Sbjct: 67 GPGGPRGWKGPKARR----GDVRAAILAVLAEQPMNGYQIIQVVAERSGGAWKPSPGSIY 122 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 PTL L+++ L+ G++ LT++G ++ E+ ++V E + A Sbjct: 123 PTLQQLEDEGLVRADAA-VGRRTFTLTDEGRTYVAEHADEVSAPWEAMSANADEDENGLK 181 Query: 162 PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 P + + VL + A+ +K + + R + I Q Sbjct: 182 PLLGQVGTALWQVL---ATGTPEQQAKARKALVELRRTLYGILQ 222 >UniRef50_B1M5I1 Transcriptional regulator, PadR-like family n=7 Tax=Alphaproteobacteria RepID=B1M5I1_METRJ Length = 210 Score = 135 bits (340), Expect = 9e-31, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 83/172 (48%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSR 73 + R G H HGH G G RFF HG+LRLVIL +++ Sbjct: 18 RVRAHRGPMGGDPRGRHGPHGHPGRGPGERRMFGRGGRGDLARFFAHGDLRLVILHLIAE 77 Query: 74 DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQ 133 HGYE+IKAIE G Y+PSPG +YPTL L+E +T+ EG K+ +T +G Sbjct: 78 KPRHGYEIIKAIEERVGGAYSPSPGTVYPTLTLLEELGHVTVTPGEGTKRLHTITPEGQA 137 Query: 134 WLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDIS 185 +L+ NR +E I R+ P + RA + K L +R+ + +S Sbjct: 138 FLDGNRPILEAILARMAEAEAARGDGPPPSVVRAKEGLKLALQMRLARGPLS 189 >UniRef50_D0XSD8 Transcriptional regulator, PadR-like family n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XSD8_9CAUL Length = 213 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 FG G+LRLV+L ++ ++ HGY+LIKAIE G Y PSPGV+YPTL L ++ LI Sbjct: 65 MFGPGDLRLVLLALIEQEPRHGYDLIKAIETAFGGGYAPSPGVVYPTLSLLADEGLIAGV 124 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ-MKRALDNFKAVL 175 E+ GK+ LT G WL+ENR V+ + +R+ + Q P+ ++ A + + Sbjct: 125 EDTSGKRIFTLTPAGQTWLDENRTAVDGVMQRMALAARLVSGEQTPEVVREAFHTLRHAV 184 Query: 176 DLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 ++ + S+A+ +++ + RA DI++ Sbjct: 185 QMK--PGNWSEAETARVVEALMRAVRDISE 212 >UniRef50_D1NZ20 Transcriptional regulator, PadR family n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1NZ20_9ENTR Length = 214 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 91/159 (57%), Gaps = 2/159 (1%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G +R F +LR+ IL +L ++GYELIK I T G Y PSPGVIYPTL L+E Sbjct: 47 GKSVRRMFNPKQLRIYILHLLVDRANYGYELIKKISESTAGLYCPSPGVIYPTLTLLEEL 106 Query: 111 SLITIREEE-GGKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRAL 168 I+I EE G+K +T +G +L E + ++ ++K A+ + A + +++ A+ Sbjct: 107 GFISIGEETAKGRKCYEITPEGRCFLLLKVEILNEVKAKLKYAQELRAGNQFANEIESAV 166 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 D FK++L ++ +S + K++ +I++A I Q++ Sbjct: 167 DKFKSLLRHKIVLQQLSKGEAAKVVEIINQAVNRIEQVN 205 >UniRef50_C5CTL4 Transcriptional regulator, PadR-like family n=2 Tax=Comamonadaceae RepID=C5CTL4_VARPS Length = 203 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 52/147 (35%), Positives = 91/147 (61%), Gaps = 3/147 (2%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR-EEEGG 121 LR V+L +++ +HGYELIKAIE+ G+Y PSPGV+YPTL L+E +++ + GG Sbjct: 57 LRFVLLQLIADKPAHGYELIKAIEDRLGGSYAPSPGVVYPTLTLLEEMGYLSVEMADTGG 116 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--QNPQMKRALDNFKAVLDLRV 179 +K+ ++T G ++L NR+ + + R+ GA R + PQ+ RA++N K + +R+ Sbjct: 117 RKRYSITASGREFLAANRDTADAMMARMSGGVDGAGPRGGRPPQVTRAIENLKLAMRMRL 176 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 + + +++ Q AV+D AA + ++ Sbjct: 177 SGTPLTEQQAHDFAAVLDSAAQQLERI 203 >UniRef50_Q0S0L1 Possible transcriptional regulator n=3 Tax=Nocardiaceae RepID=Q0S0L1_RHOSR Length = 218 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 8/203 (3%) Query: 4 HHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGEL 63 H + R + H G + + G G H G R G++ Sbjct: 8 HRGPRRDRFARERTGRPEGPHRHGHRRGRFGPEGDPGFGP-GMHFGRGRGRGGRGRRGDV 66 Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK 123 R IL +L+ + HGYELI+ I + G + PSPG IYP L L+++ L+ I E+ G+K Sbjct: 67 RSAILLLLTEEPMHGYELIQQIVERSDGVWKPSPGSIYPALSQLEDEGLVLI-EKVAGRK 125 Query: 124 QIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSD 183 LT++G ++E N+ ++ + ++ R ++ + D Sbjct: 126 TARLTDEGEAFVEANKTELGTPWDDVRESV----GRPAEDLRGLIGLLMGAAGQVAAVGD 181 Query: 184 ISDAQIKKIIAVIDRAAFDITQL 206 D Q+++ ++ A + +L Sbjct: 182 --DEQVRRAGEILTEARRAMYRL 202 >UniRef50_C7JI60 Transcriptional regulator PadR n=10 Tax=Proteobacteria RepID=C7JI60_ACEP3 Length = 196 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 97/196 (49%), Gaps = 4/196 (2%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSR 73 + RH+ + G + GR G G R R F +GE+RL++L ++S Sbjct: 2 KHRHKHAGGRNRQVFSPEGTAGSGGKHRHQHGRGGGRRGGRSRLFDYGEIRLLVLKMISE 61 Query: 74 DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQ 133 ++GYELIK IE G+YTPSPGVIYPTL +L+E I + E +K +T +G Sbjct: 62 KPTYGYELIKDIEEKFGGSYTPSPGVIYPTLTWLEEAGYIRSADGES-RKNYQITPEGEA 120 Query: 134 WLEENREQVEMIEERIKA---RCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIK 190 +L NR +E I R A G + R ++N K L LR+ + A + Sbjct: 121 FLSANRVGLEEILSRTAAAEPEGRGGRKNIPMPVMRGMENLKTALRLRLRNGGLDLAAEE 180 Query: 191 KIIAVIDRAAFDITQL 206 KI A++D AA I Q+ Sbjct: 181 KIAALLDEAARGIGQV 196 >UniRef50_Q2L0P7 PadR-family transcriptional regulator n=1 Tax=Bordetella avium 197N RepID=Q2L0P7_BORA1 Length = 167 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 6/170 (3%) Query: 37 HEHGQCCGGRHGR-GGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTP 95 H H G + GG RR+R F G +RL+ L IL+ HGYE+I+AI L G+Y+P Sbjct: 2 HSHHVRGGDPFEQEGGRRRERVFPPGAIRLLALSILASQPCHGYEVIRAIGALVGGDYSP 61 Query: 96 SPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 SPG IYPTL L++ L T + G+KQ +T G Q L+ + E +E R++ R Sbjct: 62 SPGTIYPTLALLEDMGLATASVLDDGRKQYRITPAGQQHLDAHAEDLE----RVRRRLAQ 117 Query: 156 AALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 + PQ++RA++NF+A L LR+ A ++++IA+IDRAA DI + Sbjct: 118 ERPARPPQLQRAIENFRAALRLRLEADR-DAATLERVIAIIDRAAVDIGR 166 >UniRef50_B2PUN1 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2PUN1_PROST Length = 152 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 46/143 (32%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQI 125 ++L ++++ S+GYE+IK I+ + G Y PSPGVIYPTL L+EQ + E +K Sbjct: 1 MVLSLVAKKPSYGYEIIKDIQEASNGLYVPSPGVIYPTLTLLEEQGFLESEVVERNRKSF 60 Query: 126 ALTEQGAQWLEENRE-QVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDI 184 +T +GA L+ N+E + + + KAR + + +++ A+ FKA+L ++ + Sbjct: 61 KITAEGAAHLKANQETETIIFRKLAKARDMQHGGNLSEEIEMAVSRFKALLRHKMVLKQL 120 Query: 185 SDAQIKKIIAVIDRAAFDITQLD 207 S+ Q ++I +I+ A I Q++ Sbjct: 121 SEQQTRQIAQIINDAVQQIEQVN 143 >UniRef50_A5FQF6 Transcriptional regulator, PadR family n=2 Tax=Dehalococcoides RepID=A5FQF6_DEHSB Length = 182 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 6/173 (3%) Query: 35 HQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYT 94 H E R +R R F G+++ VILD+L +HGYE+ +++E G Y+ Sbjct: 7 HNFERHSHPFDRFSHSFEKRSRMFKRGDMKFVILDLLKDKPAHGYEVTQSLEERFHGLYS 66 Query: 95 PSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 PS G +YP L L + +T E E GKK +T+ G ++L E E I+ER+ Sbjct: 67 PSTGSVYPVLQLLGDMEYVTSSEVE-GKKIYTITDGGKKFLHEQEETTNKIKERLWGWGN 125 Query: 155 GAALRQNPQMKRAL---DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 ++ + D + ++ +D A+I ++ ++D+ ++ Sbjct: 126 AKNQEYLQNIRTTMNYLDEIRELMGHIAVHND--PAKIIRVNNILDKTREEME 176 >UniRef50_D1AC56 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AC56_THECD Length = 217 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 18/197 (9%) Query: 18 EGCCKGEKSEHEHCGHGH--------QHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILD 69 C G G G G R R G +R IL Sbjct: 23 GRHCGPGVHGPGFGWMFGAGPWGGHGPWGRGGAPWGGWAPGQGTRAR---KGNIRAAILT 79 Query: 70 ILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTE 129 +L+ + ++GY+LI+ I + G + PSPG +YP L L ++ LI E E G+K +LT+ Sbjct: 80 LLAEEPANGYQLIQRIGERSGGAWRPSPGAVYPALQQLADEGLIRAAENE-GRKTYSLTD 138 Query: 130 QGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQI 189 G ++ + E++ ++ +K+A AV+ + S Q+ Sbjct: 139 AGRAYVAAHAEELNEPWAQMTPE---YGEGVPDLLKQAARTGAAVMQIVHAG---SPEQV 192 Query: 190 KKIIAVIDRAAFDITQL 206 + V+ A + ++ Sbjct: 193 AQAAQVLADARSRLYRI 209 >UniRef50_Q0FKV2 Transcriptional Regulator, PadR-like family protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKV2_9RHOB Length = 180 Score = 130 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 3/176 (1%) Query: 29 EHCGHGHQHEHGQCCGGRH-GRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIEN 87 + G H + RH G +R F +GELRL+IL ++++ HGYE+IKAIE Sbjct: 2 KRKPSGPARPHAKPSSERHKGPAKRGPRRLFEYGELRLLILAMIAQSPRHGYEIIKAIEE 61 Query: 88 LTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEE 147 G Y PSPGVIYP+L +L+E I + +E +K +T +GA ++E NR + + Sbjct: 62 RFNGGYCPSPGVIYPSLSWLEEMGYIAVEPDENARKLSRITAEGAAFIEANRTAADELLT 121 Query: 148 RIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 R A ++ A+D+ K L R+ + I+ + + + A +I Sbjct: 122 RTIPPNHRANA--PEEIVAAMDDIKLALRQRLAACGNDASVIEALTETLRKTAQEI 175 >UniRef50_C5SJF5 Transcriptional regulator, PadR-like family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SJF5_9CAUL Length = 190 Score = 128 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 3/141 (2%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ 124 LV+L ++S SHGYELI+AI++ G Y PSPG++YP L +L++ ITI + G+K Sbjct: 52 LVLLSLISEKPSHGYELIRAIDDRFNGQYAPSPGIVYPALSWLEDGGFITITPDTEGRKV 111 Query: 125 IALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDI 184 +TE G +L E E+VE + +A + RA+DN KA L R + + Sbjct: 112 ATITEAGTAFLAERAEEVERLFT--EAPQSAPEGPDFAPIFRAMDNLKAALRNRAAR-PL 168 Query: 185 SDAQIKKIIAVIDRAAFDITQ 205 + ++ I+ ID A I + Sbjct: 169 TQDELHAIVDGIDDLARRIER 189 >UniRef50_C3JSU7 Transcriptional regulator, PadR family n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JSU7_RHOER Length = 267 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +++ + HGYELI+ I + G + PSPG IYP L L+++ L+ I E+ G Sbjct: 119 DVRAAILLLIAEEPMHGYELIQQIVERSGGVWKPSPGSIYPALSQLEDEGLVII-EKVAG 177 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K LTE+G ++EE+R + + ++ + ++ + Sbjct: 178 RKTAKLTEEGVAYVEEHRADLGAPWDDVR----LSVGEPEQDLRELIGQLMGAAGQVAAV 233 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + AQ+K V+ A + ++ Sbjct: 234 G--TPAQVKAAADVLVEARKSLYRV 256 >UniRef50_UPI000050FEE8 transcriptional regulator n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEE8 Length = 185 Score = 126 bits (316), Expect = 5e-28, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 25/188 (13%) Query: 32 GHGHQHEHGQCCGGRHGRGGGRRQRF---------FGHGELRLVILDILSRDDSHGYELI 82 HG G GG + + R G++R IL +L+ HGY++I Sbjct: 6 NHGGFSRRGGDWGGSNIWEAMEQLRSSFNPKQPFRMNRGDVRAGILTLLAEAPMHGYQII 65 Query: 83 KAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQV 142 + IE + G++ PSPG +YPTL L ++ LI+ E G+K +LTE G + +E E Sbjct: 66 QEIEERSGGSWKPSPGSVYPTLQLLTDEGLISA-ESSSGRKTYSLTEAGREQVESEPES- 123 Query: 143 EMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDI----SDAQIKKIIAVIDR 198 + P RA + KA ++L + + S Q+ + + ++ Sbjct: 124 ----------SAPWETTKKPDAPRAANLAKAGVELAQAAAQVGRTGSKEQVAEAVTALEE 173 Query: 199 AAFDITQL 206 + + Sbjct: 174 TKRRLYSI 181 >UniRef50_B2IYD3 Transcriptional regulator, PadR-like family n=4 Tax=Cyanobacteria RepID=B2IYD3_NOSP7 Length = 208 Score = 125 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 7/184 (3%) Query: 25 KSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKA 84 +S H H + GRG G R G+++ ++L++LS SHGY+LIK Sbjct: 26 RSWFGHGRHHGRDRDKHFGNEMFGRGWGDEHRT-RRGDIKFILLELLSEHPSHGYDLIKE 84 Query: 85 IENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQ--V 142 +E G SPG +YPTL L+E + +EGGK+ +T++G + L E +Q Sbjct: 85 METRYGGFRRLSPGSVYPTLQLLEEGGYLKSA-QEGGKRIYTITDEGRKLLAERAQQETS 143 Query: 143 EMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFD 202 + + +K+ G ++ +++ A AV+ ++ +I ++ ++++ + Sbjct: 144 DTPWDTVKSFVTGK-PQEFIELRNAATELAAVVVQVARSGNV--ERINRVRELLEQVKRE 200 Query: 203 ITQL 206 I + Sbjct: 201 IYTI 204 >UniRef50_D1PPF6 Transcriptional regulator, PadR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPF6_9FIRM Length = 158 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 12/155 (7%) Query: 8 CCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGG-----RRQRFFGHGE 62 + + + + +G CG + + G + G Sbjct: 3 FLHYTRKETAPASPAVRRGKGSCKKYGILLTKDILCGTMYTKEAGQMNLDDWKSQIKRGT 62 Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE--- 119 L IL ++ R S+GYE+I +E IYP L L ++ I+ +E Sbjct: 63 LEFCILLMIRRQPSYGYEIISTLEK--YPLLAAKENTIYPLLRRLLKEGWISSAWQESTE 120 Query: 120 --GGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 +K +LT G ++LE ++ + ++ Sbjct: 121 GLPPRKYYSLTAAGQEYLEAMSKEWSDLLAAVQEI 155 >UniRef50_B2I0Y1 Predicted transcriptional regulator n=12 Tax=Acinetobacter RepID=B2I0Y1_ACIBC Length = 183 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 54/149 (36%), Positives = 91/149 (61%), Gaps = 2/149 (1%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 F G ++L++L ++ + HGYE+IK I +L YTPS G IYPTL L+E +LI + + Sbjct: 37 FEAGRMKLLVLHLIQQSPKHGYEIIKEISDLVGDGYTPSAGTIYPTLTSLEEMNLINLLD 96 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 E +KQ +TE G +L E+++++ + E+++ R + Q ++ RA++N K L L Sbjct: 97 VE--RKQYQITEFGEAYLNEHQDKLSGLLEKLRLRREIHSNDQLIEIHRAMENLKTALRL 154 Query: 178 RVNQSDISDAQIKKIIAVIDRAAFDITQL 206 ++N +D+ QI +I ID+AA I +L Sbjct: 155 KLNTTDLKQEQIYQIAEKIDQAAVAIGRL 183 >UniRef50_A5EFD0 Transcriptional regulator, PadR family n=2 Tax=Bradyrhizobium RepID=A5EFD0_BRASB Length = 236 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 8/196 (4%) Query: 14 QPRHEGCCKGEKSEHEHCGHGHQHEHG-----QCCGGRHGRGGGRRQRFFGHGELRLVIL 68 Q R + C+ + G G HG GGR G G RFFG G+LR ++L Sbjct: 34 QHRSDESCEEVRLGERGPGFGRHRGHGLFERDGRRGGRDEFGRGGGGRFFGPGDLRSLLL 93 Query: 69 DILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALT 128 ++ HGYELIKA+E L G Y+PSPG +YP L L++ I EGGKK A+T Sbjct: 94 WLIGEKPRHGYELIKAVEQLVGGAYSPSPGSVYPILSLLEDMGQIEAAASEGGKKLFAIT 153 Query: 129 EQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ-MKRALDNFKAVLDLRVNQSDISDA 187 + G Q L+++ +E + R++ + P+ + +A+ K L ++++ SDA Sbjct: 154 DAGRQALKDDAAAIEGLLSRMRIMARTMGGMRPPEPVLQAVQTLKMAL--KMHRPGWSDA 211 Query: 188 QIKKIIAVIDRAAFDI 203 + ++ ++ RA +I Sbjct: 212 EANRVSDILTRAIAEI 227 >UniRef50_C8XGD0 Transcriptional regulator, PadR-like family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XGD0_NAKMY Length = 263 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L HGY++I+ IE + G + PSPG +YPTL L+++ L+ E + G Sbjct: 95 DVRSAVLALLVDQPMHGYQIIQEIERRSHGAWKPSPGSVYPTLQQLEDEGLVRAEELD-G 153 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 ++ LTE G + E ++ + + A + Q+ + A + Sbjct: 154 RRVYRLTEDGRRVTAEKAQEFAGMWDA------FAPREDDTQIGDLVFQVGAAFVHVMRT 207 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + QI + V+ R D+ ++ Sbjct: 208 GN--PEQIAQARKVLARTRGDLYRI 230 >UniRef50_A3IWR1 Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IWR1_9CHRO Length = 201 Score = 123 bits (308), Expect = 4e-27, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%) Query: 2 SHHHEGCCKHEGQPRHEGCCKG--EKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFG 59 S+ H+ E + R SEH+H G G G H R G R Sbjct: 7 SYSHQSFRDLESRHRGRKHKAELLFASEHKHPGKGRPRRR-----GHHLRDGRTR---IP 58 Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G+++ ++L +L+ HGY+LI+ IE G Y PSPG +YPTL L+E + +T + E Sbjct: 59 RGDIKYLLLSLLAEKPQHGYQLIREIELRWGGFYRPSPGSVYPTLQLLEEGNYLTSEQLE 118 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 GKK +T+ G + L ++ + V Q ++K L + K V+ Sbjct: 119 -GKKVYTITDSGKELLAQHEP-------SVSMLDVVEEQPQLIELKTTLRDLKEVITQLT 170 Query: 180 NQSDISDAQIKKIIAVIDRAAFDIT 204 + + +I+++++ + + +I Sbjct: 171 RTGNKT--KIEQVVSRLKQLKREIY 193 >UniRef50_A9GIC6 Transcriptional regulator, PadR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIC6_SORC5 Length = 207 Score = 123 bits (308), Expect = 4e-27, Method: Composition-based stats. Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 1/147 (0%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G +R ++LD+L+ HGYE+I+AIE + Y PSPGVIYPTL L+E + E E Sbjct: 49 RGGVRYLVLDVLAERARHGYEVIQAIEQRSGDTYRPSPGVIYPTLQMLEELGHARVIEAE 108 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G+K +T+ G + L+ NRE V+ ER + + + + +L + Sbjct: 109 -GRKIYEITDAGREDLKANREYVDEFYERFVETSWERFAEDFGDVMKRIGSLMKMLRHAM 167 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 + I+ A + + + V+D+AA +I +L Sbjct: 168 RRGRITPAVLARTVKVLDKAAAEIEEL 194 >UniRef50_C8Q5D9 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8Q5D9_9ENTR Length = 273 Score = 122 bits (307), Expect = 6e-27, Method: Composition-based stats. Identities = 55/155 (35%), Positives = 88/155 (56%), Gaps = 1/155 (0%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 GRR R F +GELRL++L I+++ SHGYELI + G Y PSPGV+YP L +L ++ Sbjct: 17 GRRARAFDYGELRLLLLAIIAKQPSHGYELIHEVNERLGGTYKPSPGVLYPALTWLYDRG 76 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNF 171 I E+GG+K+ +T++G +L N+ ++M+ R+ + G + + A+D+ Sbjct: 77 YAEIDLEKGGRKRYRITDEGNAFLSANKTVIDMLVARVVPKAQGHG-KSPQAIVEAMDHL 135 Query: 172 KAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 K L LR ++D + +I +I AA I L Sbjct: 136 KRALSLRAKMEPVADQVVTRIGEIIHVAANQIEAL 170 >UniRef50_Q1AYM9 Transcriptional regulator, PadR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYM9_RUBXD Length = 176 Score = 122 bits (306), Expect = 8e-27, Method: Composition-based stats. Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 2/170 (1%) Query: 37 HEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPS 96 G G G R+R FG G+L+ VILD+L R +HGY+LIKA+E ++G Y PS Sbjct: 1 MVRAPGGFFWRGSGFGPRRR-FGKGDLKYVILDLLERGPAHGYQLIKALEERSRGLYAPS 59 Query: 97 PGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 PG +YPTL L++ + E GKK +TE+G +L E R +E + R Sbjct: 60 PGSVYPTLQMLEDMGYVGSS-REDGKKVYQITEEGRGFLRERRRSLEEVWRRFGRGWDPG 118 Query: 157 ALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +++ L + + + + +++++ V+ AA I + Sbjct: 119 LEGELHEIRHELAHLWRLFGRKARAGRVDQEKLRRVRGVVVEAARRIEDI 168 >UniRef50_Q21BY2 Transcriptional regulator, PadR family n=5 Tax=Alphaproteobacteria RepID=Q21BY2_RHOPB Length = 215 Score = 122 bits (306), Expect = 8e-27, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 1/144 (0%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 LRLV+L +++ HGY+LI+A+E LT G Y PSPG++YPTL L + LI + EG + Sbjct: 73 LRLVLLKLIADKPRHGYDLIRAVEELTGGAYAPSPGIVYPTLTLLSDMGLIAEQSAEGAR 132 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQS 182 KQ A+T +G L E +V + R++A ++RA+ N ++VL R+ + Sbjct: 133 KQFAVTPEGTAHLAEQATEVAAMLARLEALGAMRERVDAVPVRRAMHNLRSVLQHRLGEG 192 Query: 183 DISDAQIKKIIAVIDRAAFDITQL 206 + +++ +A+ID AA I +L Sbjct: 193 -LDKERLQAAVALIDEAAQKIERL 215 >UniRef50_A8IL86 Transcriptional regulator n=8 Tax=Rhizobiales RepID=A8IL86_AZOC5 Length = 228 Score = 121 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 19/218 (8%) Query: 4 HHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGEL 63 H GC H + R +GE G G G GG G R R G+L Sbjct: 15 HMFGCRHHGREERFAAGGRGEFGGGFGGGWGRGRRGGGGFGGGGGGDFFRIGRMLAQGDL 74 Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK 123 +L+ L +++ HGYE+IK IE T G Y+PSPGV+YPTL FL+E +T E +G KK Sbjct: 75 KLLALSLIAEQPRHGYEIIKLIEEKTGGWYSPSPGVVYPTLTFLEEAGYVTA-EPDGAKK 133 Query: 124 QIALTEQGAQWLEENREQVEMIEERIKARC---------------VGAALRQNPQMKRAL 168 + +TE+G +LEEN++ + + R+ G + A+ Sbjct: 134 RFTITEEGRAYLEENKDVADALVGRLSEIGLKVGKMRRWMGKGEEGGEPSGLPRLVDAAI 193 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 +N K V ++ ++ ++ +I+ ++ A D+ ++ Sbjct: 194 ENLKDVAKAKLAENPRTE---TRIVEILAGVANDLREV 228 >UniRef50_D2M8Y5 Transcriptional regulator, PadR-like family n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M8Y5_RHOPA Length = 226 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 14/163 (8%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R R G+L+L+ L +++ HGY++IK IE T G Y PSPGV+YPTL +L+E Sbjct: 36 RAGRMLAQGDLKLIALALIAEQPRHGYDIIKVIEEKTAGWYAPSPGVVYPTLTYLEETGH 95 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV----------GAALRQNP 162 + + EG KK T++G L NR E + +R+ + A P Sbjct: 96 VVAQP-EGAKKLYVATDEGRDHLAANRALAEAVFDRLASFGEMMRQQNGEGAPEAGDLPP 154 Query: 163 QMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQ 205 ++ ALDN + V ++ + ++A++ +A++ RAA ++ + Sbjct: 155 LLRAALDNLREVAIRQIAKDPDNEAEL---VAILARAAGELRK 194 >UniRef50_A0Q9V4 Transcriptional regulator, PadR family protein n=21 Tax=Actinomycetales RepID=A0Q9V4_MYCA1 Length = 256 Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 11/146 (7%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ HGYE+I+ I + G + PSPG +YPTL L ++ LIT E +G Sbjct: 117 DVRAAVLALLAERPMHGYEMIQLIAERSNGLWKPSPGSVYPTLQLLADEGLITATETDGS 176 Query: 122 KKQIALTEQGAQWLEE-NREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 KK LT+ G E+ + I E A + ++ A+ + + Sbjct: 177 KKLFELTDDGRAAAEKIETPPWDEIAE--------GADPGHMNLRAAIGQLFGAVGQ--S 226 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 S Q ++I+ +++ A +I + Sbjct: 227 AHTASPEQQQRIVDILNNARREIYGI 252 >UniRef50_C5QNA0 PadR family transcriptional regulator n=4 Tax=Staphylococcus RepID=C5QNA0_STAEP Length = 187 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 8/166 (4%) Query: 28 HEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIEN 87 +H + G+ G GG R RFF G L+ VIL +L + HGY++IK +E Sbjct: 10 RQHMEKFEGFDFGRGATGFGSPRGGGRDRFFKKGNLQFVILKMLKEESRHGYQIIKDLEE 69 Query: 88 LTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEE 147 +G Y PSPG +YP L L+++ ++I ++G KK ++TE+G ++LEEN + + Sbjct: 70 RFKGFYAPSPGSVYPILQMLEDREFVSIS-KDGKKKVYSITEEGEKFLEENID-----ND 123 Query: 148 RIKARCVGAALRQNPQMKRALDNFKAVLD--LRVNQSDISDAQIKK 191 R Q+K + + V ++ +Q + D ++KK Sbjct: 124 AFTQRMEQFQNIDFEQLKASREQLHEVFQGFMKASQRALQDEEMKK 169 >UniRef50_A6SZ38 Transcriptional regulator n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZ38_JANMA Length = 187 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 99/152 (65%), Gaps = 3/152 (1%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 FGHG LR V+L ++S SHGYELIK+IE G Y+PSPG +YPTL L+E SL+++ E Sbjct: 36 FGHGGLRFVLLHLISEKASHGYELIKSIEERLGGAYSPSPGTVYPTLTLLEELSLLSVEE 95 Query: 118 EE-GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR--QNPQMKRALDNFKAV 174 + GG+K+ +T+ G ++L+E+RE V+ + R+ GA R + PQ+KRA++N K Sbjct: 96 ADQGGRKRYQITDAGLRYLDEHREMVDAMLLRLNGGVDGAGPRGGRPPQVKRAIENLKLA 155 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +R++ ++ Q A++DRAA + Q+ Sbjct: 156 MRMRLSGETLTQEQANAFAAILDRAAQQLEQI 187 >UniRef50_UPI0001C3245B transcriptional regulator, PadR-like family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3245B Length = 255 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 4/145 (2%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G++R L +L+ +GY++++A+E + G + PSPG +YP L L+++ L+ E+ Sbjct: 93 RRGDVRTAALLLLAEQPRNGYQIMQALEERSNGAWRPSPGSVYPALQQLEDEGLVRSTEQ 152 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 + G+K LT++G Q++EE E V +++ A M+ A + A+ + Sbjct: 153 D-GRKLFELTDEGRQYVEERGEDVPAPWDQMAGDISADAW---ALMQTAREVGMAMFQVM 208 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDI 203 + SD + ++I+A R + + Sbjct: 209 QSGSDAQRREAQRILAATRRDLYRV 233 >UniRef50_Q2G591 Transcriptional regulator, PadR family n=2 Tax=Sphingomonadaceae RepID=Q2G591_NOVAD Length = 214 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 70/136 (51%) Query: 71 LSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQ 130 +++ HGY+LI+A+ L G Y PSPGV+YPTL L ++ LI +G +K A T+ Sbjct: 79 VAQQPRHGYDLIRAVGELAGGEYAPSPGVVYPTLSLLVDEGLIAEEAGDGPRKAFAATDA 138 Query: 131 GAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIK 190 G L+ ++++ I R+KA +P ++RA+ N AVL R Sbjct: 139 GRTELDGRSDELDAIVARLKALGDQGERSASPPVRRAMGNLHAVLRNRAMAEGFDTETAH 198 Query: 191 KIIAVIDRAAFDITQL 206 I ++D AA I +L Sbjct: 199 AIADILDEAARRIERL 214 >UniRef50_B8H9F8 Transcriptional regulator, PadR-like family n=3 Tax=Micrococcineae RepID=B8H9F8_ARTCA Length = 180 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 12/180 (6%) Query: 27 EHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIE 86 + + R + G R G GE+R +L +L+ HGY++I+ IE Sbjct: 9 GFGSNNMDGLWQAIEDFRSRFEKPEGTRA---GKGEVRAAVLALLAERPMHGYQIIREIE 65 Query: 87 NLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIE 146 + G++ PS G +YPTL L ++ +I E G+K +LTE G N Sbjct: 66 ERSGGSWKPSAGSVYPTLQLLADEGVIRAEES-NGRKIYSLTEAGRDEAAGNAA------ 118 Query: 147 ERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 A + + +A + Q+K+ +AV+D A + + Sbjct: 119 SNPWAGAGPQSTAGFASLPKAGVELAQAAAQVGRTG--TPEQVKQAVAVLDEARRRMYSI 176 >UniRef50_A0RKG2 Transcriptional regulator, PadR family n=50 Tax=Firmicutes RepID=A0RKG2_BACAH Length = 188 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%) Query: 46 RHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLD 105 H + + G + +++L I+ + D++GYE+I+ ++ + YT S G +YP L Sbjct: 72 HHKVVNHKMDKEILKGSIDILLLSIIKQRDTYGYEIIQKLKENSNDLYTMSQGTLYPALK 131 Query: 106 FLQEQSLITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 L+++ LI E +K +T G + LEE + + IK GA Sbjct: 132 RLEQKDLIHSYWGESETGMKRKFYRITTSGKKMLEEKLTAWDSVTALIKTCQKGA 186 >UniRef50_A1R8I7 Putative transcriptional regulator, PadR family domain protein n=2 Tax=Actinobacteria (class) RepID=A1R8I7_ARTAT Length = 178 Score = 116 bits (291), Expect = 5e-25, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 11/160 (6%) Query: 47 HGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDF 106 R R G GELR IL +L+ HGY++I+ IE + G++ PS G +YPTL Sbjct: 26 RSRFEKRSGTRAGRGELRTAILALLAERPMHGYQIIREIEERSGGSWKPSAGSVYPTLQL 85 Query: 107 LQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKR 166 L ++ + EE G+K +LTE G + + E GA + + Sbjct: 86 LADEGFV-STEESNGRKIYSLTEAGREDVAS--------AETAAPWESGAGTHGFAALPK 136 Query: 167 ALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 A + Q+++ + V++ A + + Sbjct: 137 AGVELAQAAAQVGRTG--TPKQVQEAVTVLEDARRRLYSI 174 >UniRef50_B4W6A1 Transcriptional regulator, PadR family protein n=2 Tax=Proteobacteria RepID=B4W6A1_9CAUL Length = 217 Score = 115 bits (289), Expect = 8e-25, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 98/208 (47%), Gaps = 11/208 (5%) Query: 6 EGCCKHEGQPRHEGCCKGEKSEHEH-------CGHGHQHEHGQCCGGRHGRGGGRRQRFF 58 GC + G+P G G G + G+ G HG G R F Sbjct: 12 NGCGEKHGRPGSFGFGHGFGHAFGRGMRGGRGADFGPGWDGGEARGRGHGHGRRGGGRLF 71 Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 HG LR V+L +++ SHGYELIKA+E G Y+PSPGVIYP+L L+E + + Sbjct: 72 DHGTLRWVLLSLIAEKPSHGYELIKAVETRLGGAYSPSPGVIYPSLTLLEEMGALESQ-T 130 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 EGGKK ++TE G L EN + E + A + ++ A+ + + R Sbjct: 131 EGGKKLYSITEAGRALLAENEAILRAAEATMDKFAARA--LRPTAIQDAIGRLRHTIHAR 188 Query: 179 VNQS-DISDAQIKKIIAVIDRAAFDITQ 205 + +++AQ++ I A++ AA + Q Sbjct: 189 LTGETALTEAQVQAIAAILAEAADKVEQ 216 >UniRef50_B2Q1E3 Putative uncharacterized protein n=3 Tax=Providencia RepID=B2Q1E3_PROST Length = 183 Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 92/159 (57%), Gaps = 2/159 (1%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G R F +LR+ IL +L+ ++GYELIK I T G Y PSPGVIYPTL L+E Sbjct: 14 GKSLSRMFNPKQLRVYILHLLADGSNYGYELIKKIGQETAGFYCPSPGVIYPTLTLLEEL 73 Query: 111 SLITIREEEG-GKKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRAL 168 LIT +E+G G+K +LT +G +L + + ++ ++ A+ + A + +++ A+ Sbjct: 74 GLITAYKEQGKGRKCYSLTPEGKCFLLLKADILAEVQLKLSYAQELTAGNQFAKEIELAV 133 Query: 169 DNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 D FK++L + +++ Q +++ +I+ A I Q++ Sbjct: 134 DRFKSLLRHNIVLQELTKEQSMRVVEIINSAVERIEQVN 172 >UniRef50_C8SSA8 Transcriptional regulator, PadR-like family n=2 Tax=Mesorhizobium RepID=C8SSA8_9RHIZ Length = 229 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 3/200 (1%) Query: 4 HHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGEL 63 +H G R G+ G G G+ G R R G+L Sbjct: 5 NHFGRGHFG--ERMFMHMAGKFGGRGGGGFGPFGHGGRGGGRGGPGDMFRAGRMLADGDL 62 Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKK 123 +L+ L +L+ HGY++IKA+E T G Y+PSPGV+YPTL FL+E + EG KK Sbjct: 63 KLITLSLLAEAPRHGYDIIKALEERTSGIYSPSPGVVYPTLTFLEEAGY-AVSSSEGNKK 121 Query: 124 QIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSD 183 ++TE G L +NRE ++ + + ++ A ++ + + Sbjct: 122 VFSITEAGQAHLADNREMIDGVLDHLERFGRKMAKARDWFGWNDDGEDRRGGRGGRGERS 181 Query: 184 ISDAQIKKIIAVIDRAAFDI 203 + + + I + A DI Sbjct: 182 ETRDEFRAIRHRLRAALGDI 201 >UniRef50_B8HG13 Transcriptional regulator, PadR-like family n=4 Tax=Micrococcineae RepID=B8HG13_ARTCA Length = 206 Score = 113 bits (283), Expect = 4e-24, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G++R IL +L+ S+GY LIK I T+G + PSPG IYPTL L ++ LI E Sbjct: 67 RGDVRAAILSLLAESPSNGYGLIKTIAEKTEGAWRPSPGSIYPTLQQLVDEGLIEAMSEG 126 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G + +LTE G +++ + E+++ + ++ + F++ + Sbjct: 127 RG-TEFSLTETGREYVAGHTEEMDSAWNAVPEGSDREFHHSIGKLMGVIHQFRSGV---- 181 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 ++ Q I +D + ++ Sbjct: 182 -----TEEQRTAAIEKLDETRRALYKI 203 >UniRef50_D2B5F1 Transcriptional regulator protein-like protein n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B5F1_STRRD Length = 250 Score = 112 bits (281), Expect = 6e-24, Method: Composition-based stats. Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 6/202 (2%) Query: 4 HHEGCCKHEGQPRHEGCCKGEKSEHEHCG--HGHQHEHGQCCGGRHGRGGGRRQRFFGHG 61 HH G H P G GR R R G Sbjct: 44 HHGGPGPHGWAPHEHRHRGHRGGPFGGGAFPWDFGRGGPGRGGPFGGRPPFGRGRKAKRG 103 Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ + +GY++I+ IE ++G + PSPG +YP L L ++ L+ E + G Sbjct: 104 DVRAAILALLTEEPHNGYQIIQEIERRSEGGWKPSPGAVYPALQQLTDEGLVLSEEND-G 162 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K LTE G ++ E+ ++V E + + M A + A+L + Sbjct: 163 RKSFRLTEAGRAYVTEHADEVRAPWEEMTPDVDDSTWE---MMNLARQSGFAMLQILQTG 219 Query: 182 SDISDAQIKKIIAVIDRAAFDI 203 SD Q K+I+ R + I Sbjct: 220 SDAQIRQAKQILTETRRKLYQI 241 >UniRef50_C8VZL9 Transcriptional regulator, PadR-like family n=2 Tax=Firmicutes RepID=C8VZL9_DESAS Length = 114 Score = 112 bits (280), Expect = 8e-24, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 4/106 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 + G +++L +L R+ +GY++IK IEN + G + G +YP L L+ +I Sbjct: 5 KELLKGSTVILVLSLLDREPMYGYQMIKEIENKSSGVFKFKEGTLYPILHSLEADGMINA 64 Query: 116 RE----EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 +K +T++G +L++ +++ + A Sbjct: 65 NWWGNEGSRQRKYYQITKKGNLYLKDKQQEWVTFRSAVDKFLTREA 110 >UniRef50_Q47QT2 Transcriptional regulator, PadR family n=2 Tax=Actinomycetales RepID=Q47QT2_THEFY Length = 240 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 6/169 (3%) Query: 41 QCCGGRHGRGGGRRQRFFGHG--ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPG 98 G G G R R ++R IL +L+ GYE+IK + G + SPG Sbjct: 63 GGPRGPFGFHGPRGGRGMRARRGDVRTGILLLLAERPMSGYEIIKEGRERSNGVWRLSPG 122 Query: 99 VIYPTLDFLQEQSLIT-IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 +YP L L+ + L+T G ++ LTEQG ++ E+ ++ E A+ Sbjct: 123 SVYPVLQQLESEGLVTLAATGVGRRRPYELTEQGHAYVAEHAAELTPPWES-AAQEYEET 181 Query: 158 LRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 ++ ++ A + +DAQ++++ ++ +A + ++ Sbjct: 182 HARHLELASLASQLTAAVAQVSQVG--TDAQVERVKQLLVKARKSVYRI 228 >UniRef50_B9J7W6 Transcriptional regulator protein n=9 Tax=Rhizobium/Agrobacterium group RepID=B9J7W6_AGRRK Length = 227 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 91/203 (44%), Gaps = 25/203 (12%) Query: 24 EKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIK 83 E H E + G GG R R F +L+L+IL +LS HGYELIK Sbjct: 22 RHGERRDSRGRHGREFMRGFKGGMFGGGFRTGRKFDAADLQLIILALLSEQPRHGYELIK 81 Query: 84 AIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVE 143 +E + G Y PSPGVIYP L +L+E L + E G KK +TE G + +EENRE VE Sbjct: 82 TLEERSGGFYVPSPGVIYPALTYLEETGLAEV-EASGTKKLYRITESGQKRVEENRELVE 140 Query: 144 MIEERIKARCVGAAL---------------------RQNPQMKRALDNFKAVLDLRVNQS 182 ++ A A R+ + RA A L + Sbjct: 141 ATLAKLGAIGERMAHVKRAFDGENNGDDEGRDGPFGREAGDVHRARHLLHAALRSK---H 197 Query: 183 DISDAQIKKIIAVIDRAAFDITQ 205 S A+ +I A+++RAA DI + Sbjct: 198 PWSKAEGARIAAILERAAADIIR 220 >UniRef50_C1RLJ9 Transcriptional regulator, PadR family n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RLJ9_9CELL Length = 230 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 7/145 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L+ S+GY LIKAI T G + PSPG +YPTL L ++ L+T + Sbjct: 90 DVRAAILQLLAEFPSNGYGLIKAIGERTGGLWRPSPGSVYPTLQQLTDEGLVTPTDAGSA 149 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 + + LTE+G ++E + +++ R ++ + A VL + Sbjct: 150 RTEYTLTEEGRAYVEAHPDELAAAWGPAAQR-----WEEHGDLIEASGKLLGVLRQVGAE 204 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 + Q ++ + +D D+ ++ Sbjct: 205 G--TAEQRERTVQKLDELRRDLYRM 227 >UniRef50_B6IW77 Transcriptional regulator, PadR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IW77_RHOCS Length = 334 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 2/128 (1%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G+ RL+ L +LS HGYELI+A+ +L G Y+PSPG++YPTL L++ + E Sbjct: 82 LDQGDPRLLALHLLSEKPRHGYELIRAMSDLLGGAYSPSPGMMYPTLSLLEDLGYVARDE 141 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 EGG+K LT GA +LEENR VE +R ++ R P+++ A+D K L Sbjct: 142 SEGGRKPYTLTPAGALFLEENRPLVETALQRARSVRDR--HRGIPEVEAAMDGLKRALAG 199 Query: 178 RVNQSDIS 185 R+++ ++ Sbjct: 200 RLSRPSLT 207 >UniRef50_C6WET7 Transcriptional regulator, PadR-like family n=11 Tax=Actinomycetales RepID=C6WET7_ACTMD Length = 316 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 12/147 (8%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +R ++ +L+ HGYE+I+ I T G + PSPG +YPTL L ++ L+ EE+GG Sbjct: 172 NVRAAVIALLAERPMHGYEMIQEIGQRTDGLWKPSPGSVYPTLQLLADEGLVVAAEEQGG 231 Query: 122 KKQIALTEQGAQWLE--ENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 KK LTE G E E E + + + + +++ A A + V Sbjct: 232 KKLFQLTESGRTEAESAEGVPPWEQVTDGVD--------QGEARLREAAKQIGAAMMQMV 283 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 + ++ Q ++ ++D + + Sbjct: 284 HAG--TEDQQRRAAELLDETRRKLYAI 308 >UniRef50_A6BF93 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BF93_9FIRM Length = 109 Score = 110 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 3/106 (2%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 + + G ++IL ++S D +GYE+I + + + G +YP L + + Sbjct: 1 MKVNKNMVSGNTAMLILKLISEKDMYGYEMIDTLSKRSDNVFELKVGTLYPLLHSMVQSG 60 Query: 112 LITIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 + +E +K +T G ++LE+ E+ + + Sbjct: 61 YLESYNQEANGKLRKYYRITPNGKKYLEKMIEEWNAYANAVTSMIQ 106 >UniRef50_C0H3S6 Putative DNA-binding protein ywzG n=5 Tax=Bacillaceae RepID=YWZG_BACSU Length = 112 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 4/106 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R G +++L +L+ +GYEL+K + + + G +YP+L L+ Q I+ Sbjct: 4 RELVKGSTVILVLTLLNERPMYGYELVKEMGSRSGNELQMKEGTLYPSLHKLERQGYISS 63 Query: 116 REEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 E+ +K +T++G + L E ++ + + + Sbjct: 64 YWEKQEKGPDRKYYRITDEGKEVLAERTKEWSVFSAMMDRILKWSG 109 >UniRef50_D1VPN8 Transcriptional regulator, PadR-like family n=1 Tax=Frankia sp. EuI1c RepID=D1VPN8_9ACTO Length = 267 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 6/145 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ HGY+L++AI T G + PSPG +YPT+ L+++ L+T+ +GG Sbjct: 91 DVRAAVLLLLADGPRHGYQLMQAIAERTGGAWQPSPGAVYPTISQLEDEGLVTVT-ADGG 149 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 ++ + +TE G +L +NR+ + AR A + A+ + Sbjct: 150 RRLVTITEAGQAYLAKNRDTIGDPFAAFTAR---AGRAGGVDLLGAVQELSGAVWQVARA 206 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 D Q V+ A + L Sbjct: 207 GDAG--QTAAAHKVLTDARRALYLL 229 >UniRef50_Q4J6E8 Transcriptional regulator PadR-like family n=2 Tax=Sulfolobus RepID=Q4J6E8_SULAC Length = 159 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 14/148 (9%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G LRL++L L+ + YE+IK+IE +G Y PS G IYP L L I I+E Sbjct: 12 RRGTLRLLVLSSLAEKPMYLYEIIKSIETKAEGFYRPSTGSIYPVLRSLARDGYIIIQER 71 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV-LDL 177 + GKK +LT++G + +EE + ++E + R +P +R +D + L + Sbjct: 72 D-GKKIYSLTDKGVKKVEEIKIEIESLFTR------------DPLKRRVIDLLFNIGLTV 118 Query: 178 RVNQSDISDAQIKKIIAVIDRAAFDITQ 205 +N+ I D + ++I +++ + + Sbjct: 119 HINRKKIDDKVLNQLITDLEKCMALVEE 146 >UniRef50_Q2RG05 Transcriptional regulator, PadR family n=2 Tax=Clostridia RepID=Q2RG05_MOOTA Length = 119 Score = 109 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L +L +++ ++ +GYE++K + T G IYP L L+++ L+T Sbjct: 17 QIKKGALEFCVLAVIAWEERYGYEIVKVLNE---HGLTTPEGTIYPLLARLKKEGLVTAT 73 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E +K +T++G L+E + E + + G Sbjct: 74 WRETAQGNPRKYYRVTDKGKTALDEFKRSWSEFTETVNSILKGG 117 >UniRef50_A8M728 Transcriptional regulator, PadR-like family n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M728_SALAI Length = 189 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 +R +L +L+ HGYE+I+ I++ T G + PSPG +YPTL L+++ +I E GG Sbjct: 48 NVRNAVLALLTERPMHGYEMIQEIDSRTGGAWRPSPGSVYPTLQLLEDEGVIVSTAEGGG 107 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K+ LT QG E E A + Q++ A L + Sbjct: 108 RKRFTLTPQG------EPEAAESARTPPWAEVTDTTVTNWHQVREAGTQVMYALRQVMTT 161 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 +D Q ++ V+ + + Sbjct: 162 G--TDDQRERAAQVLGETRRKLYAI 184 >UniRef50_D1BI54 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BI54_SANKS Length = 271 Score = 109 bits (272), Expect = 8e-23, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 7/143 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +LS HGY+LI+ I + G ++PSPG IYP L+ L+++ LI I + G Sbjct: 109 DIRGAVLLLLSEQPMHGYQLIQEITERSGGRWSPSPGAIYPALNLLEDEGLIVIT-ADSG 167 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 +K +LT +G +E++RE + +R G A ++ A+++ Sbjct: 168 RKLASLTPEGVSHVEQHREDLVAPWDR----ATGQAAHPARALREAMESLGGAAHQIART 223 Query: 182 SDISDAQIKKIIAVIDRAAFDIT 204 + AQ + + +++A ++ Sbjct: 224 G--TQAQTAQALRTLEQARRELY 244 >UniRef50_C3MJS4 Transcriptional regulator PadR family protein n=9 Tax=Sulfolobus RepID=C3MJS4_SULIL Length = 148 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 11/149 (7%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L+ ++L+ L+ YE+IK+IE +G+Y PS G IYP L L E+ L+ ++ Sbjct: 10 LKKGALKYLVLECLNEKPMRTYEIIKSIEKKFEGSYRPSTGSIYPVLKGLVEKDLVEVK- 68 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 E GKK +T++G + LEE + + + +G + + Q+ + + + L Sbjct: 69 VENGKKIYIITDKGKKELEEIKNK--------SLKLLGDNAKFSRQILQ--ELLQIAFYL 118 Query: 178 RVNQSDISDAQIKKIIAVIDRAAFDITQL 206 N+S I + I+KII + ++ + Sbjct: 119 YNNRSKIDENNIQKIIQHLRNCRNELRDI 147 >UniRef50_D1YXU7 PadR-like family transcriptional regulator n=2 Tax=Euryarchaeota RepID=D1YXU7_METPS Length = 106 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R G L++++L I+S+ HGY++I AIE +T G++ PSPG IYP LDFL+ + + Sbjct: 7 GREMRKGFLKMIVLKIISKKPIHGYDIIHAIETITHGHWVPSPGSIYPVLDFLEARGYV- 65 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 EE KK +TE+G + LE E+ + E + Sbjct: 66 SMEEIDRKKVYTITEEGKKALEAIEEKRRQLTEEMSLLF 104 >UniRef50_UPI000038E215 transcriptional regulator n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E215 Length = 196 Score = 107 bits (267), Expect = 2e-22, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 1/143 (0%) Query: 19 GCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHG 78 G EK E + G + H G H G G +R L+ +IL++ S ++ G Sbjct: 24 GKRYSEKDEKDCNGMNGEMGHRMGNMGHHRMGSGENRRGMHGFGLKYLILNMASSEEITG 83 Query: 79 YELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEEN 138 ++I ++ T+G + PSPGVIYP L L E+ + +RE + KK TE+G + +++ Sbjct: 84 VDVIDRVDRRTEGRWVPSPGVIYPALRKLYEEGYLEMRE-DNNKKYYKATEKGKEVVKDT 142 Query: 139 REQVEMIEERIKARCVGAALRQN 161 +E I + ++ Sbjct: 143 IFPWNQRKEEINSIDTILERMED 165 >UniRef50_A4YE88 Transcriptional regulator, PadR family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YE88_METS5 Length = 154 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 15/151 (9%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L+ +I+D L H YE++K IE G Y PSPG +YP L L + L+ + E Sbjct: 8 LRRGALKFLIMDALHHKPMHAYEIMKTIEGKFNGVYKPSPGSLYPVLKNLIREGLVKVEE 67 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV-LD 176 + GKK +LT++G + E + + I K+ + + L Sbjct: 68 RD-GKKVYSLTDEGLKKWTEAKANINSILST------------PVDYKKLVSMLFDISLV 114 Query: 177 LRVNQSDISDAQI-KKIIAVIDRAAFDITQL 206 L + + D ++ ++ + + I ++ Sbjct: 115 LYSYRDKMFDEKVYNQVSSALLECRAKIERI 145 >UniRef50_C0ZGN3 Putative transcriptional regulator n=3 Tax=Firmicutes RepID=C0ZGN3_BREBN Length = 110 Score = 107 bits (267), Expect = 3e-22, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 7/106 (6%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 + G L IL ++ + +GYE+I +E IYP L L ++ Sbjct: 4 EDWKSQIKRGTLDFCILLLIKQRPYYGYEIISKLEQ--YPIIAAKENTIYPLLRRLLKEE 61 Query: 112 LITIREEE-----GGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 I+ ++ +K +TE+G ++L + + + I Sbjct: 62 YISSSWQDSTEGLPPRKYYTITEKGNEYLNAMSLEWDNLLTAISEI 107 >UniRef50_B4DB33 Transcriptional regulator, PadR-like family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB33_9BACT Length = 224 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 31/211 (14%) Query: 25 KSEHEHCGHGHQHEHGQC-----CGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGY 79 + EH HC H GG G G R R F +L+ +IL ++S +HGY Sbjct: 11 RGEHPHCAHKGFFGRHGGEFFDRFGGGPGGPGFRPGRLFTSEDLQFIILALISAKPAHGY 70 Query: 80 ELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENR 139 E+IK IE + G Y PSPGVIYP L +L+E SL + E EG KK +TE GA+ L +NR Sbjct: 71 EIIKEIERRSSGVYAPSPGVIYPALTYLEEASL-AVSEAEGAKKLYRITEAGAEHLAKNR 129 Query: 140 EQVEMIEERIKARCVGAALRQN------------------------PQMKRALDNFKAVL 175 +Q + + ER+ A ++ M+ + K L Sbjct: 130 QQTDEMLERLAQWGERIAHFRDQMAQEEEADERWGGSPRDQQRKEWRAMREEFHDMKREL 189 Query: 176 DLRVNQSDISD-AQIKKIIAVIDRAAFDITQ 205 + + + + ++++ ++ RA +I Q Sbjct: 190 KAALFEKRSAPMEEKQRVLEILRRAIAEIRQ 220 >UniRef50_C6NX27 Transcriptional regulator, PadR-like family n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX27_9GAMM Length = 140 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 5/144 (3%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 LR V+L L R+ HGYELIK + + G Y+PSPG+IYP L L+E L+ + E G K Sbjct: 2 LRFVVLQELDREPCHGYELIKRLTERSGGIYSPSPGMIYPMLTMLEELGLVLVTES-GNK 60 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQS 182 ++ +LT++G +L+ENR + + + R A M+R L + + RV + Sbjct: 61 RRYSLTDRGKDFLDENR----ALTQAVAERLEALAKDDWENMRRHLQGLRDAVHERVAVA 116 Query: 183 DISDAQIKKIIAVIDRAAFDITQL 206 + ++ +++ A + L Sbjct: 117 HGQRQVVARLEEILENALKQVRNL 140 >UniRef50_Q4C4V0 Transcriptional regulator PadR-like n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C4V0_CROWT Length = 152 Score = 106 bits (266), Expect = 4e-22, Method: Composition-based stats. Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 10/137 (7%) Query: 68 LDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIAL 127 L +L+ HGY+LIK IEN G Y PSPG +YPTL L+E++ +T +E E GKK ++ Sbjct: 18 LSLLAEKPQHGYQLIKEIENRWGGFYRPSPGSVYPTLQQLEERNYLTSQEVE-GKKVYSI 76 Query: 128 TEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDA 187 T+ G Q L + E + + + ++K L + + V+ Sbjct: 77 TDSGEQLLAQQPSSAETLNKS-------EEQPKLIELKMTLRDLQEVIMQVTRSDKS--K 127 Query: 188 QIKKIIAVIDRAAFDIT 204 I K+++ + + +I Sbjct: 128 NIDKVLSSLKKLKKEIY 144 >UniRef50_A1SQM2 Transcriptional regulator, PadR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SQM2_NOCSJ Length = 234 Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 10/169 (5%) Query: 45 GRHGRGGGRRQRF--FGHGELRLVILDIL-----SRDDSHGYELIKAIENLTQGNYTPSP 97 G G G RQR G++R ILD++ + + +GY++I+ I + G + PSP Sbjct: 53 GLFGLAQGDRQRGPRVRRGDVRTAILDVVRTAQWNGEPVNGYQVIQQIAERSNGAWRPSP 112 Query: 98 GVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 G +YPT+ L+++ L+ E+ GG++ + LT +G ++ ++ +++ + + Sbjct: 113 GSVYPTIQQLEDEGLL-ATEDTGGRRSLRLTAEGEAYVADHADELSSVWAPFEEPERDET 171 Query: 158 LRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + +K + + V S+ Q + I V+ + + Sbjct: 172 QGRYADLKPEIGQVMGAVWQIVTTG--SEQQRRAAIDVLVETRRKLYGI 218 >UniRef50_A8LCR1 Transcriptional regulator, PadR-like family n=12 Tax=Actinomycetales RepID=A8LCR1_FRASN Length = 130 Score = 106 bits (264), Expect = 6e-22, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 4/107 (3%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE----EGG 121 ++L IL+ ++S+GY ++K I L+ G + G++YP L L+ + E Sbjct: 15 IVLGILAEEESYGYAILKRINELSGGELDWTEGLLYPLLHRLERLGHVESSWRSATGERR 74 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRAL 168 +K +T+ G L E R Q + + + +K G R A+ Sbjct: 75 RKYYRITDTGLAELAEQRRQWDTVVDALKEIWTGLGDRGPLTAIPAI 121 >UniRef50_B2TFG8 Transcriptional regulator, PadR-like family n=67 Tax=Proteobacteria RepID=B2TFG8_BURPP Length = 287 Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 41/240 (17%) Query: 2 SHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHG---HQHEHGQCCGGRHGRGGGR----- 53 +HHH+ + E H H H H GG Sbjct: 34 AHHHDCRGERGRDEHDEFRAAPRGGPARHGYDRFTLHALWHAIGRHHEHRGGGRGGRFGG 93 Query: 54 -------------RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI 100 R R F +L+L++L ++ SHGYELIKA+E + G Y+PSPG++ Sbjct: 94 GPGGFGGDGDGFPRGRKFSSDDLQLLLLSMIGSQPSHGYELIKALETRSNGFYSPSPGMV 153 Query: 101 YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERI----------- 149 YP L +L+E +T++ EG +K+ L+E G ++L NR++ E++ ++ Sbjct: 154 YPALTYLEELGYVTVQL-EGNRKRYELSETGREYLAANRDRAELMLAKLSHIARKMDSVR 212 Query: 150 -----KARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 + + P++ A K L + + + AQ ++I ++ RAA +I Sbjct: 213 RAFAGEEPADISEGGWLPELSEARRALKHAL---LRRDNAPAAQQRRIAEILLRAAKEIE 269 >UniRef50_B5GFD7 Putative uncharacterized protein n=4 Tax=Streptomyces RepID=B5GFD7_9ACTO Length = 244 Score = 105 bits (263), Expect = 8e-22, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 9/145 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R IL +L HGYE+I+ I + G + PSPG +YPTL L+++ LI R E G Sbjct: 70 DVRASILALLKDRPMHGYEMIQEIAERSGGAWKPSPGSVYPTLQLLEDEGLILSR-SESG 128 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KK ALTE+G + E + G ++++A Sbjct: 129 KKLFALTEEGRAAADAGPE------APWEEASKGVDWEAVGEIRQAGFGLMEAFGQVWKT 182 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 S Q ++ +AV++ + + Sbjct: 183 G--SKEQRERAVAVLNETRKRLYLI 205 >UniRef50_B0R6W2 Putative uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6W2_HALS3 Length = 176 Score = 105 bits (262), Expect = 1e-21, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ G + ++L++L +GYE++K IE+L+ G++ PS G +YP L +E Sbjct: 1 MRKSGPPKGLVSYLVLELLDEQPRYGYEILKEIESLSGGHWEPSYGSVYPILYKFEENGY 60 Query: 113 IT--IREEEGGKKQIALTEQGAQWLEENREQV 142 E+E +K LT+ G + L RE+V Sbjct: 61 AERLDVEDEPDRKYFELTDAGREELAAKREEV 92 >UniRef50_B8I8C9 Transcriptional regulator, PadR-like family n=12 Tax=Bacteria RepID=B8I8C9_CLOCE Length = 116 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 4/113 (3%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 + + G ++IL +L ++D +GY++ + +E + +T G +YP L L+ Sbjct: 1 MKIDKELLKGSTTMLILKLLEKEDMYGYQMTRELELRSDNTFTLKEGTLYPILHSLESDG 60 Query: 112 LITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 +I EE +K +T +G + LE+ +++ + +K G + Sbjct: 61 MIEAYWEETDSARKRKYYRITVKGRKLLEDKQKEWSKYADAVKKVLGGGEVEP 113 >UniRef50_A5IKC3 Transcriptional regulator, PadR family n=5 Tax=Thermotogaceae RepID=A5IKC3_THEP1 Length = 150 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 9/147 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L+ ++L I+S+ SHGY ++K I + G PSPG +YP L L++Q I E Sbjct: 5 KGHLKFLVLHIISQQPSHGYYIMKKISQII-GAEPPSPGALYPILSSLRKQKYIETY-NE 62 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G +K LT++G ++LEE++E+++ + + V + + ++ +D Sbjct: 63 GKRKVYRLTDKGRKYLEEHKEEIKKALDFAERFRVFSEICG-LSLRNVVDVIFK------ 115 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 N D++ Q KK+ + ++ + Sbjct: 116 NAKDLTPEQKKKLKHATEDFERNVYNI 142 >UniRef50_A7HPG2 Transcriptional regulator, PadR-like family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HPG2_PARL1 Length = 242 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 66/194 (34%), Gaps = 18/194 (9%) Query: 2 SHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHG 61 + H+ CK PR G + + G Sbjct: 17 AASHKKRCKLRRLPR------GPLGNPKCSPYIGPIYRSNIVPSARPAGNKDSLSM---- 66 Query: 62 ELRLVILDILSRDDSHGYELIKAIENL-TQGNYTPSPGVIYPTLDFLQEQSLI----TIR 116 ++ + L L ++ GYE+ K E+ S G IYP L L E+ L+ + Sbjct: 67 QVTTLCLGALVFGEATGYEINKMFEDGPFSHFLDASYGSIYPALTRLTEEGLVTCKAEPQ 126 Query: 117 EEEGGKKQIALTEQGAQWLEENREQ---VEMIEERIKARCVGAALRQNPQMKRALDNFKA 173 E KK +LTE+G + L E +Q + + A L +++ +D A Sbjct: 127 ERRPDKKIYSLTEKGRKSLSEALQQTLAPDKFRSEFLFTVLFAHLLPRSRVRSLVDQRLA 186 Query: 174 VLDLRVNQSDISDA 187 + +V + D Sbjct: 187 AMKEKVEEMAQPDE 200 >UniRef50_C5C5Y5 Transcriptional regulator, PadR-like family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C5Y5_BEUC1 Length = 277 Score = 105 bits (261), Expect = 1e-21, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 7/145 (4%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L + HGY+L++ I + G++ PSPG IYP L+ L ++ L+ + EGG Sbjct: 113 DVRAAVLLLLHEEPMHGYQLMQEIAERSGGSWRPSPGAIYPALNLLADEGLVELS-AEGG 171 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 ++ +LT+ G + E+ + + G + Q++ A++ Sbjct: 172 RRLASLTDAGRAHVTEHADALGNPWAD----GAGRGPSAHRQLREAIETVGVAAHQVART 227 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 S Q+ +A ++ A ++ + Sbjct: 228 G--SPDQVAASLAALEAARRELYLI 250 >UniRef50_Q2NCW1 Putative transcriptional regulator n=4 Tax=cellular organisms RepID=Q2NCW1_ERYLH Length = 222 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 14/169 (8%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 RR R F GELRL +L +++R+ HGYELI+AIE++T G Y PSPG +YPTL L+E+ Sbjct: 54 KRRGRMFAQGELRLALLALIAREPRHGYELIRAIEDMTGGGYAPSPGAVYPTLQLLEEEG 113 Query: 112 LITI------------REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA-- 157 I E GGKK T+ G LEE E+V+ + ER+ A A Sbjct: 114 QIKPAKAKGKAKSEGGESETGGKKPFKATKSGKAELEERAEEVDQLMERLGAHGERAERV 173 Query: 158 LRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 ++P + RA+ N VL +R + I +I+ +ID A I +L Sbjct: 174 REKSPDLFRAMGNLANVLKIRARSGKLDQNTIDQIVDIIDEVAKRIERL 222 >UniRef50_UPI0001C35727 PadR-like family transcriptional regulator n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35727 Length = 158 Score = 104 bits (260), Expect = 2e-21, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 3/103 (2%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G +++L +L+ D +GYE+I+ + + + G +YP L L+++ +T Sbjct: 4 DKSLISGSTSMLLLKLLTEKDMYGYEMIETLRKKSNDVFELKAGTLYPLLHSLEQKGYLT 63 Query: 115 IREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 EEE +K ++T +G ++L+ E+ + + Sbjct: 64 SYEEEASGKVRKYYSITGEGKRYLKGKEEEWKQYAGAVSGVLA 106 >UniRef50_D2EEC8 Transcriptional regulator, PadR family n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEC8_9EURY Length = 172 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 66/159 (41%), Gaps = 11/159 (6%) Query: 45 GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTL 104 + R FG ++ IL ++S++ G ++I I ++ G + PSPG IY L Sbjct: 23 HKFAHSIHGISRGFG---IKYWILMLVSKEKMTGAQMIDKIYEMSFGFWRPSPGSIYSIL 79 Query: 105 DFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQM 164 +L E + + E++ KK ++T++G ++L+ + + + Sbjct: 80 KYLSESGFVKV-EQKDNKKYYSITDRGKEYLDSSWFPWRSASS-------FMNKDEGTSI 131 Query: 165 KRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDI 203 ++ + + + + + KKI+ ID I Sbjct: 132 DETIETIDNLSEFISEKGKLLSKENKKILKKIDDRLHSI 170 >UniRef50_Q0W129 Predicted transcription regulator (PadR-like family) n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W129_UNCMA Length = 171 Score = 103 bits (258), Expect = 3e-21, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 9/152 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE- 118 L +L +L HGY L++ IE T G++ PS IY L+ L+ IT EE Sbjct: 14 KASLNYFVLMLLRNSPKHGYMLMQDIERHTGGHWRPSHSAIYKLLNRLEADGYITSWEEK 73 Query: 119 --EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 E ++ ++E G + LEE+ E + + A + L + Sbjct: 74 DGERARRVYKISETGKKLLEESERDFESFINAFISSLLEAERVNPDHLTVLLTKKGKAMM 133 Query: 177 LRVNQSDISDAQIKKIIAVIDRAAF-DITQLD 207 + Q K + + +I +++ Sbjct: 134 NAL-----DPDQRLKALMKLKTFLDTEIVRVN 160 >UniRef50_B0RN88 Transcriptional regulator, PadR-like family n=5 Tax=Xanthomonas RepID=B0RN88_XANCB Length = 177 Score = 103 bits (258), Expect = 3e-21, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 6/165 (3%) Query: 41 QCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI 100 GR RGG R GHG+LRL++L ++ + HGYEL++ I L +G YTPS G I Sbjct: 14 DTPAGRARRGGT--ARPLGHGDLRLLLLALIEQQPRHGYELMRQIAQLFKGLYTPSAGTI 71 Query: 101 YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 YP L L+ + + +++ G+K+ +TE G +R+ ++ R R Q Sbjct: 72 YPALAQLEADGWV-LTDQDHGRKRYQITEAGRGHASAHRDALDAALARTHRRARDLIKAQ 130 Query: 161 -NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 P ++ A+ K L R ++A+ +I A+++ AA + Sbjct: 131 TPPPIRDAIHRIKHGLFARH--GQWTEAETARIAALLNAAADGME 173 >UniRef50_Q465T5 Transcriptional regulator, PadR family n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q465T5_METBF Length = 155 Score = 102 bits (255), Expect = 6e-21, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 2/131 (1%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 L+ ++L I+ +HGY++IK +E + G + PS G IYP L+ L+ + I Sbjct: 13 TEIRRAFLKYIVLKIIKEKPTHGYDIIKTVELRSNGRWIPSAGSIYPILEKLESKGFIQS 72 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA-ALRQNPQMKRALDNFKAV 174 E +K +T +G + L+ ++ + + N + + N V Sbjct: 73 EGIE-RRKVYTITPKGVKGLDRMTQEKLELLNEMSRIVNNVIEGNDNSDAEGKIGNAHDV 131 Query: 175 LDLRVNQSDIS 185 D Sbjct: 132 RQKSETAHDCD 142 >UniRef50_B4SHM6 Transcriptional regulator, PadR-like family n=3 Tax=Stenotrophomonas RepID=B4SHM6_STRM5 Length = 186 Score = 102 bits (254), Expect = 8e-21, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 2/134 (1%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 + R G+LRL++L ++ HGYEL++ I N YTPS G +YP L + Sbjct: 17 PRRNGQPRVLSRGDLRLLVLALIGEQPRHGYELMQLISNQFMQAYTPSAGTMYPLLASFE 76 Query: 109 EQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEER-IKARCVGAALRQNPQMKRA 167 + I E + GK+ +T G L+ R QV + + R P + A Sbjct: 77 QAGWIEAEEVD-GKRIFRITAAGEFELKVQRTQVRLAQRRAFDRAREITKASLPPPLAGA 135 Query: 168 LDNFKAVLDLRVNQ 181 L FK L + Sbjct: 136 LREFKRALVHHHGR 149 >UniRef50_A9AWY2 Transcriptional regulator, PadR-like family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWY2_HERA2 Length = 111 Score = 102 bits (254), Expect = 8e-21, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 +R G L L+++ ++ + +GY + K I LT G +YP L L+++ + Sbjct: 1 MFERELLKGSLGLMLMALVEQGPMYGYLIAKEIRALTDDVIDLKEGSLYPALHRLEKEGM 60 Query: 113 ITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 I + ++ +T G L+E R Q + A Sbjct: 61 IEGFWQRREDGVDRRYYRITAAGQAVLDERRAQWSRFSAAVSKVVSDA 108 >UniRef50_C7QEY5 Transcriptional regulator, PadR-like family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QEY5_CATAD Length = 334 Score = 102 bits (254), Expect = 8e-21, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 4/143 (2%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R+ IL +L ++GY+L++ IE T G + PS G IYP L L+++ ++ E E G Sbjct: 187 DVRITILILLDEGPANGYQLMQEIEQRTNGAWKPSSGSIYPALQQLEDEGIVQTTEGE-G 245 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV-LDLRVN 180 +K AL+++G ++ +NR + E + +++ + + + Sbjct: 246 RKMFALSDEGKTYVRDNRAKWTAPWE--GMEEEEGPSEEATKIRDVIAQLAMAYMQVIQV 303 Query: 181 QSDISDAQIKKIIAVIDRAAFDI 203 +D A+ +++ +A + I Sbjct: 304 GTDSQRAEASRVLVGARQALYRI 326 >UniRef50_C2BYK8 PadR family transcriptional regulator n=3 Tax=Bacillales RepID=C2BYK8_LISGR Length = 108 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 8/105 (7%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 F G L L L ++ D +GYEL + + GVIYP L L T Sbjct: 5 SQFKKGTLELCCLHLIHEKDCYGYELAQQVST----YIKVGEGVIYPILRRLVSDGWCTT 60 Query: 116 R----EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E +K +T G Q L+ ++ + ++++ G Sbjct: 61 YLQDSSEGPSRKYYQITAAGEQHLQVLTKEWQQFTQQMEELLTGG 105 >UniRef50_A3DGN6 Transcriptional regulator, PadR family n=4 Tax=Clostridiales RepID=A3DGN6_CLOTH Length = 115 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 44/106 (41%), Gaps = 4/106 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G +++L +L D +GY++I+ + + + G +YP L L+ + Sbjct: 4 DKSLMAGSTTILVLKLLEERDMYGYQMIETLAQRSDDTFNLKAGTLYPILHNLRNNGYVE 63 Query: 115 IREEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E+E +K LT +G + L E +++ + G Sbjct: 64 SYEKEESNGKIRKYYYLTSKGKKLLREKQKEWITFSSAVNKILNGG 109 >UniRef50_A6DRV1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRV1_9BACT Length = 113 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 4/100 (4%) Query: 66 VILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE----EGG 121 V+L +L+ + +GYE+IK + T G + G +YP L ++ + LI + E Sbjct: 14 VVLKLLNEREMYGYEIIKEVHERTNGEFQWKEGTLYPCLHRMEGEGLIKSEWQKPEGERR 73 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 +K ++ G Q L + + E + N Sbjct: 74 RKYYHISGLGKQQLTSRVNEWQKFSESVNTLFSPLNEPSN 113 >UniRef50_C9XPK8 Padr-family transcriptional regulator n=97 Tax=cellular organisms RepID=C9XPK8_CLODC Length = 110 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 8/112 (7%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQE----QS 111 F G L + +L ++S+ D +GYE++ I + G IYP L L + ++ Sbjct: 3 TQFRKGVLEICVLALISKKDMYGYEIVHNISK----VIDVNEGTIYPILRRLTKDLYFET 58 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ 163 I E +K +T G + L E+ + ++ + Sbjct: 59 YILESNEGPARKYYRITSLGKENLSNLMEEWREFVKAVEILISEDEGGNELE 110 >UniRef50_C2AQN6 Predicted transcriptional regulator n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AQN6_TSUPA Length = 246 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 25/156 (16%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G++R+ +L +L + HGY+++ +IE T G + PSPG IYPTL L+++ LI+I E Sbjct: 85 QRGDVRIAVLKLLESEPMHGYQIVSSIEERTAGAWKPSPGAIYPTLSQLEDEGLISI-ER 143 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARC--------VGAALRQNPQMKRALDN 170 E G+K LT+ G ++ + + ++ L Sbjct: 144 ENGRKVATLTDAGREY--------------VTESLADNDPFAGFAGGSEERGHLRDTLHE 189 Query: 171 FKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 V QI + A++ A I L Sbjct: 190 LHEVTRRVGRTGGG--EQIAAVDAILGDAIKQIYLL 223 >UniRef50_D1PN95 Transcriptional regulator, PadR family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN95_9FIRM Length = 121 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 9/112 (8%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R + G L +++L +L+ SHGY+LI + + G G +YP L L+E+ Sbjct: 7 RFAQQLKKGVLEMLVLRLLADAPSHGYQLIVRLRESSGGMLELKEGTLYPILYRLEEEGC 66 Query: 113 ITIREEEGG---------KKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 I ++ ++TE G LE+ + ++ Sbjct: 67 IASAWNRPDKQLSSGKVPRRVYSVTETGRTVLEQETAAWHRFVDCVEQYVGR 118 >UniRef50_C9D3S1 Transcriptional regulator n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D3S1_9RHOB Length = 192 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 11/154 (7%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT------IREE 118 +L + GY++ +AI T + S G IYP L L+++ LI Sbjct: 16 YAVLGFVMMGPKSGYDIKQAISRSTSFFWNESAGQIYPILRALEDEGLIERDTTSPTSTG 75 Query: 119 EGGKKQIALTEQGAQWLEENREQVEM---IEERIKARCVGAALRQNPQMKRALDNFKAVL 175 + ++ +T++G L+ + + + A + L++ + L Sbjct: 76 KRQRQMYQITDRGQAALQNWIAGPNSDVIVRNELLLKMFFGASVAPQVIIEMLEDHRHGL 135 Query: 176 DLRVN--QSDISDAQIKKIIAVIDRAAFDITQLD 207 R+ + I Q ++ ++ AAF I+ LD Sbjct: 136 QDRIAFFEEIIRQRQAEEAAGKLENAAFMISTLD 169 >UniRef50_A9WKS9 Transcriptional regulator PadR-like family n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WKS9_RENSM Length = 217 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 8/148 (5%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G++R IL LS + +GY L+KAI + G + PSPG +YP L LQ + LI Sbjct: 75 QKGDVRNAILSRLSDSNYNGYGLMKAIALHSDGAWRPSPGSVYPALSGLQAEGLIVS-IG 133 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 EG + + L+E+G ++ E+++++ + ++ A ++ ++ + Sbjct: 134 EGRRTEFELSEEGRSYVAEHKDELAAVWAEVREETGAAH-----DLRLSIGKLMGAVQQI 188 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQL 206 D ++ Q++ + A +D A I +L Sbjct: 189 --TMDGTEEQLRTVTASLDEARRTIYKL 214 >UniRef50_C7LZY3 Transcriptional regulator, PadR-like family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZY3_ACIFD Length = 183 Score = 101 bits (251), Expect = 2e-20, Method: Composition-based stats. Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 11/141 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 +R IL +L HGYEL+ I + G + PSPG IYPTL L++Q L+ +G + Sbjct: 51 IRAEILRLLLDGPKHGYELMNLIAEQSGGAWQPSPGSIYPTLQLLEDQGLVASA-SDGDR 109 Query: 123 KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQS 182 + LT+ G + + E ++ A R P++ + + + + ++ + Sbjct: 110 RVYQLTDAGRE-------EAERLQHEPGPHAGPAGARLGPEIAQVMGALRTI---AMSGT 159 Query: 183 DISDAQIKKIIAVIDRAAFDI 203 + IA R + I Sbjct: 160 PEQRDAAQSAIAEFRRTLYQI 180 >UniRef50_A6BZG9 Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZG9_9PLAN Length = 110 Score = 100 bits (250), Expect = 3e-20, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 3/105 (2%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G + ++IL+++S ++GYE+ + + N + + G +YP L LQ + L+ Sbjct: 4 QLFAGTMEMLILELVSEGPTYGYEITQRVTNRSANEFELKEGSLYPALHKLQRKKLLKSF 63 Query: 117 EEE---GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 E +K LT QG + L E R++ + I+ + Sbjct: 64 WREVDGRRRKYYELTIQGQKALNEKRQEWKQFSSAIERILGAQSG 108 >UniRef50_Q9RVI7 Pex-related protein n=1 Tax=Deinococcus radiodurans RepID=Q9RVI7_DEIRA Length = 131 Score = 100 bits (250), Expect = 3e-20, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 5/108 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 G + LVIL + +G EL++ I + G + S G +YP L L + I Sbjct: 22 MTPLKSGTVDLVILAAVGEQPRYGLELVQHINARSGGLFELSEGSLYPALLRLSKADWIV 81 Query: 115 IREEE-----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 + +K LT+ GA+ LE + + ++ + A A Sbjct: 82 GDWQPTPGGGSPRKVYTLTDSGAKELERRKGEWSRLQSAVNALLWRGA 129 >UniRef50_C7P8R4 Transcriptional regulator, PadR-like family n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P8R4_METFA Length = 149 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 11/151 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L+ +IL +L +++ HGY +++ + + Y PS GVIYPTL L+ I Sbjct: 4 ERIRGSLKYLILYLLEKEELHGYAIMQKLNEMFVY-YKPSSGVIYPTLQSLRRSGYIEAV 62 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 ++E KK +TE+G ++L+EN E++E I I+A L K Sbjct: 63 KKE-DKKLYKITEKGKKYLKENEEKLENIFSHIEAVRGFYELGG--------KELKDAAR 113 Query: 177 LRVNQ-SDISDAQIKKIIAVIDRAAFDITQL 206 L V +++D Q K+I + A I + Sbjct: 114 LIVKNFHNLNDRQKKEIEKTLKETARKINLI 144 >UniRef50_C7QKF8 Transcriptional regulator, PadR-like family n=4 Tax=Actinomycetales RepID=C7QKF8_CATAD Length = 123 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L ++L +L+ SHGY LI+A+ + + G + G +YP L L+ L+ Sbjct: 5 MMRGHLDGLVLAVLATGPSHGYGLIEALRDRSGGVFDLPEGSVYPALHRLERAGLVASGW 64 Query: 118 EE---GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRA 167 E ++ +LT G++ E+ R + ++ A Sbjct: 65 SEVAGRRRRVYSLTASGSRAAEDRRTEWRSFSAAVERVFGAETKAGGGGRTDA 117 >UniRef50_B8FYD5 Transcriptional regulator, PadR-like family n=22 Tax=Clostridiales RepID=B8FYD5_DESHD Length = 115 Score = 100 bits (249), Expect = 3e-20, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G ++IL +L D +GY++I+ + +Q + G +YP L L++++++ Sbjct: 4 DKSLLTGSTTMLILKLLEETDMYGYQMIEELSKKSQNIFELKAGTLYPLLHSLEQKNMLI 63 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 E+ +K ++T+ G ++L+E ++ ++ + G Sbjct: 64 SYEKSTTNLRVRKYYSITKTGRKYLDEKTKEWKVYTSAVNNVLGG 108 >UniRef50_Q97A48 Putative uncharacterized protein TVG0986825 n=1 Tax=Thermoplasma volcanium RepID=Q97A48_THEVO Length = 151 Score = 99.6 bits (247), Expect = 6e-20, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 19/148 (12%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 G L+ IL ++S +G E++ IE + G + PSPG +YP L+ L+ L+ E+ Sbjct: 10 RRGNLKYWILYLVSTKPMNGAEVMDEIERHSFGMWRPSPGSVYPALEQLEADGLVIRNED 69 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 A TEQG + L R + +D ++++ Sbjct: 70 GR----YAATEQGKEEL---------------GITSAEFSRSPKTVSGIVDEIESMVMYL 110 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQL 206 + + K + ++ I +L Sbjct: 111 SDVMPVQPEDSKLNVTRLENVVSKINEL 138 >UniRef50_B9KC28 Transcriptional regulator, PadR family n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KC28_THENN Length = 153 Score = 99.3 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 77/144 (53%), Gaps = 6/144 (4%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L+ ++L ++S++ SHGY ++K I + G PSPG +YP L L++Q I E E Sbjct: 8 KGHLKFLVLHVISQEPSHGYHIMKKISQI-MGAEPPSPGALYPVLSSLRKQRYIETHE-E 65 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G KK L+E+G ++L+E+ ++++ E + + + + + ++ +D + Sbjct: 66 GKKKIYRLSEKGRKFLKEHEKEIKEALEFAERFRMFSEICGS-SIRNVMDVIFKNVK--- 121 Query: 180 NQSDISDAQIKKIIAVIDRAAFDI 203 N S +++K+I ++ + I Sbjct: 122 NLSSDQKSKLKQITEEFEKKVYSI 145 >UniRef50_Q633A4 Transcriptional regulator, PadR family n=18 Tax=Bacillus cereus group RepID=Q633A4_BACCZ Length = 122 Score = 99.3 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L IL ++S+ +GYE+ +++ + + G IYP L+ + + Sbjct: 10 QLRKGVFDLAILSLISKQPMYGYEITSSLQAI--PVFHIPNGSIYPILNRITKNHWAVSY 67 Query: 117 EEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQM 164 EE G +K +T++G + L + + + + G + + Sbjct: 68 WEESGDGPKRKYYRITDEGREILHSRLHDYDAVYQALMLLAKGEDKNEQGTI 119 >UniRef50_A5IWB9 Transcriptional regulator, PadR family n=35 Tax=Staphylococcus RepID=A5IWB9_STAA9 Length = 112 Score = 99.3 bits (246), Expect = 8e-20, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI--- 113 G L IL ++++ +++GYE++ ++N S G IYP L L ++ + Sbjct: 6 QIMKGLLDGAILGLIAQGETYGYEIMTKLKNQ--EFPEISEGSIYPVLMRLNKKGYVDTT 63 Query: 114 --TIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 +K +T+ G + L+ + + + + + + G Sbjct: 64 IKKSSNGGPRRKYYTITDSGLKELKVFKSKWQALNKGMINLFGGEN 109 >UniRef50_C1FK14 Transcriptional regulator, PadR family n=4 Tax=Clostridium RepID=C1FK14_CLOBJ Length = 121 Score = 99.3 bits (246), Expect = 8e-20, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 5/105 (4%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 + G + +IL +L +D +GYE+ K + N++Q + G +Y L L+ +L+ Sbjct: 16 KEMIKGYIESIILCLLKDEDLYGYEISKIVRNMSQETFEIKEGTLYVVLKRLENDNLVLS 75 Query: 116 RE-----EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 G ++ +T+ G ++ +E+ + I G Sbjct: 76 YWGNDKSGGGRRRYYKITDDGLNYIIRKKEEWIFFKNIIDTFFKG 120 >UniRef50_B5IBP0 Transcriptional regulator, PadR family, putative n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBP0_9EURY Length = 112 Score = 98.9 bits (245), Expect = 9e-20, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 R G + L IL ILSR +G E+IK +++L+ G G +YP L ++ + LI Sbjct: 6 RELKKGLIELSILSILSRGKKYGLEIIKELDSLSNGFLKIKEGTLYPALHRMEARGLIES 65 Query: 116 RE----EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 +K LT++G + EE +E + E + Sbjct: 66 EWVLVESGIPRKYYKLTDEGIKKYEEGKEIWRITVESMNNIL 107 >UniRef50_Q4ZPG6 Transcriptional regulator PadR-like n=13 Tax=Pseudomonas RepID=Q4ZPG6_PSEU2 Length = 196 Score = 98.9 bits (245), Expect = 9e-20, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 4/134 (2%) Query: 71 LSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQ 130 ++ +HGY+LI+ IE L +G Y PSPGVIYPTL FL+E ++ + GKK +T+ Sbjct: 54 IAEQPAHGYDLIRKIEGLFEGAYCPSPGVIYPTLTFLEESEMVAGDAQ-AGKKLYTVTDA 112 Query: 131 GAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQI 189 G Q LE+ +E + RI ++ + P++ A+ N + L + S +I Sbjct: 113 GRQSLEDQAVALEGVRMRIDVSKRSLRGHDRPPEIHEAVHNLRHALQMHH--GRWSPEEI 170 Query: 190 KKIIAVIDRAAFDI 203 ++ +++ A + Sbjct: 171 LRVSELLNSTARAV 184 >UniRef50_B9XHE1 Transcriptional regulator, PadR-like family n=2 Tax=bacterium Ellin514 RepID=B9XHE1_9BACT Length = 112 Score = 98.9 bits (245), Expect = 9e-20, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + +IL ILS D +GY LI+ ++ L+ G S G++YP L +++++ LI Sbjct: 3 SKELVAASTTTLILSILSEGDCYGYALIQRVQELSDGEILWSEGMLYPVLHWMEKEKLIE 62 Query: 115 IREEEGG----KKQIALTEQGAQWLEENREQVEMIEERI 149 EG +K L + G + L++ ++Q + + Sbjct: 63 SEWREGDLGRKRKYYRLCKAGTKALQQEQKQWMTVHSTL 101 >UniRef50_D1A5M7 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A5M7_THECD Length = 195 Score = 98.9 bits (245), Expect = 9e-20, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 13/178 (7%) Query: 32 GHGHQHEHGQCCGGR---HGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENL 88 G G G G R R G +R +L +L+ HGYE+I+ +EN Sbjct: 20 GAFGPWGAPFGPPGPDLWGGPHGRRHGRRMKRGNVRAALLALLAERPMHGYEMIQELENR 79 Query: 89 TQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEER 148 T G + PSPG +YP L L+++ L+T RE EGGK+ +LT+ G + + + Sbjct: 80 TSGAWRPSPGSVYPNLQMLEDEGLVTSRE-EGGKRLFSLTDTGRREAARHG---DAPWRE 135 Query: 149 IKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + L ++ R L+ + V+ S Q + + +I + + Sbjct: 136 FAEQPDEGVLHTREEVGRLLNALQQVMAA------GSTEQRSRALELIADTRRKLYGI 187 >UniRef50_Q1IMK2 Transcriptional regulator, PadR family n=9 Tax=Acidobacteria RepID=Q1IMK2_ACIBL Length = 113 Score = 98.9 bits (245), Expect = 9e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L L+IL +++ HGY +++ I+ +++ G +YP L L+ + +T Sbjct: 9 LPQGTLDLLILRVVALGPVHGYAIVQRIQQISKDALHIQQGSLYPALHRLENKEFLTADW 68 Query: 118 --EEGGK--KQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E G+ K LT +G L+ E + E + G Sbjct: 69 GPSETGREAKFYRLTTKGRAQLKAETESWTRLTEVVGMILQGE 111 >UniRef50_Q025E2 Transcriptional regulator, PadR family n=4 Tax=Acidobacteria RepID=Q025E2_SOLUE Length = 131 Score = 98.9 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 4/104 (3%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L +++L L HGY + ++I + G +YP L +++Q + Sbjct: 27 ELLQGTLGMLVLRALQWGPQHGYAISQSIRTQSSEVLQVETGSLYPALHRMEKQGWVRAE 86 Query: 117 EEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 ++ K +LT G + L E + + + I A Sbjct: 87 WKQTDSNQRAKFYSLTAAGKKQLHEEHARWKRMVAAIGQIMEPA 130 >UniRef50_C7QDM4 Transcriptional regulator, PadR-like family n=3 Tax=Actinomycetales RepID=C7QDM4_CATAD Length = 128 Score = 98.5 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 6/111 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L +V+L +L+ +S+GYE+ + ++ G G +YP L L+ + + R Sbjct: 18 QLLKGVLSMVLLHLLAEKESYGYEVAQRLQA--AGFADVLEGTVYPALTRLEREGRLATR 75 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ 163 +K LT G + L + ++A + Sbjct: 76 LVPSPNGPARKYYRLTPTGRETLHAAGQSWSRHVSAVEAVLARPLPPPPEE 126 >UniRef50_Q47SG6 Transcriptional regulator, PadR family n=1 Tax=Thermobifida fusca YX RepID=Q47SG6_THEFY Length = 268 Score = 98.5 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%) Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGA 132 HGYE+I + + G Y+PSPG IYP L L+E+ L+T EE G+K LT++G Sbjct: 20 ESPRHGYEIISLLRDRFLGIYSPSPGTIYPRLARLEEEGLVT-HEEVNGRKVYRLTDKGR 78 Query: 133 QWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKI 192 L E +E +E +I A ++ + + + L + S ++ ++ Sbjct: 79 AELRERERDLEDLERQITESVRDIAQAVQRDVRDTISHLREELKATAQHTRRSRSERQES 138 Query: 193 IA 194 Sbjct: 139 AK 140 >UniRef50_D1A757 Transcriptional regulator, PadR-like family n=2 Tax=Streptosporangineae RepID=D1A757_THECD Length = 116 Score = 98.1 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 3/106 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G L ++L +L + HGY +I+A+ + G G +YP L L+ +T Sbjct: 10 RGHLDALLLSVLEHEPLHGYAIIEALSERSGGALNVPTGTVYPALRRLERTGEVTSEWAT 69 Query: 120 ---GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 ++ LT G + LE R I + Sbjct: 70 VGGRRRRTYRLTPAGRRRLEGERTAWRAFAAAIGSVLEPRVRPSQA 115 >UniRef50_Q46CE0 Transcriptional regulator, PadR family n=2 Tax=cellular organisms RepID=Q46CE0_METBF Length = 107 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G L IL ++S D+++GYE+ + ++ G S G IYP L L++ +LI Sbjct: 4 SQMLKGILENCILKVISGDETYGYEISQQLQK--YGFSDISEGTIYPLLLRLEKNNLIKA 61 Query: 116 REEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 + E +K ++T G + LE + + + Sbjct: 62 KYRESALGPKRKYFSITPAGEKELEAFINNWQELNHAVNQLF 103 >UniRef50_D1BL27 Transcriptional regulator, PadR-like family n=5 Tax=Firmicutes RepID=D1BL27_VEIPT Length = 109 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G + +++L +L++DD +GYE++ I S G IYP + L+++ + Sbjct: 4 QLKKGVMDMLVLALLTQDDRYGYEIVSTISE----YIEISEGTIYPLFNRLKKEKYVETY 59 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 +E +K +T G + R++ + I G Sbjct: 60 LKESSTGPSRKYYHITADGRAAYNQMRQEWDEFSGVINILLKG 102 >UniRef50_Q0W4V9 Putative transcription regulator (PadR-like family) n=3 Tax=Euryarchaeota RepID=Q0W4V9_UNCMA Length = 119 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + + G +L IL +L D +GYELI +E + G YP L ++ L Sbjct: 7 KWLKELKKGSTKLSILSLLRSGDKYGYELIHELEVRSGGIIIIKESNAYPALHTMEGDGL 66 Query: 113 ITIREEEGG-----KKQIALTEQGAQWLEENREQVEMIEERIK 150 + +E G +K +T +G ++LE + + + + Sbjct: 67 VESYWKETGEGIPPRKYYRITPRGREFLEGMIREWKRYVKAMD 109 >UniRef50_A4CA37 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CA37_9GAMM Length = 116 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 R F G L +IL L + S+GYE+ I+ LT + G +YP L+ L+ Sbjct: 10 ERWLPQFRKGLLEFIILLKLQQGQSYGYEIASEIKRLTM--IDVAEGTLYPLLNRLKRDG 67 Query: 112 LITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERI 149 L+ + +K +TE G + L + + I Sbjct: 68 LVITEWQTAEVGTPRKYYQITELGYEVLTKMKFTWSNTHNSI 109 >UniRef50_C2D961 Possible transcriptional regulator n=2 Tax=Bacteria RepID=C2D961_9ACTN Length = 122 Score = 98.1 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 7/107 (6%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G L V++ ++ + D +GY+LI+ + IYP L L + Sbjct: 11 NEEWVSQIKRGTLEYVLMLLILQKDRYGYDLIQTLNA--YPMLKTKESTIYPLLRRLLKN 68 Query: 111 SLITIREE-----EGGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 + + +K +T G ++ + ++ + I Sbjct: 69 GYLESYWQHVDEGTPARKYYRITPAGTLYVNQLDSDWNVLTQSISKL 115 >UniRef50_Q9RD92 Putative uncharacterized protein SCO2859 n=1 Tax=Streptomyces coelicolor RepID=Q9RD92_STRCO Length = 125 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 6/119 (5%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 R G L +L ++ +G EL+ A+E G S G +YP L L+ + Sbjct: 9 QARAAAQLRKGVLEYCVLALMRDRPRYGVELLHALEE--SGALATSQGTVYPLLSRLRRE 66 Query: 111 SLITIREEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMK 165 L+T +E ++ ALT G L+E + + A + Sbjct: 67 DLVTTTWQESASGPPRRYYALTATGRAALDEFTHVWPGFRDAVDAFLATTPHPSAGDLA 125 >UniRef50_C8WGP1 Transcriptional regulator, PadR-like family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WGP1_EGGLE Length = 113 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R + G L +++L +L ++ +GY+LI + + + G G +YP L L++ L Sbjct: 4 RFAQQMKKGALDMLVLKLLQHEEKYGYQLISELRDRSNGALALKEGTLYPILYRLEDGGL 63 Query: 113 ITIR-----EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 +T R +E +K A+TE G L E E + +++ Sbjct: 64 VTSRMSAHVAKEPARKYYAITEAGRDALREMYEIWNEFDGHVRSIMEEE 112 >UniRef50_Q722V1 Transcriptional regulator, PadR family n=16 Tax=Firmicutes RepID=Q722V1_LISMF Length = 110 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G L L L ++ + D +GYEL + + G IYP L L ++ + Sbjct: 6 QFKKGVLELCCLFLIQKKDCYGYELANQVSK----YIEVAEGAIYPVLRRLVKEEYCSTY 61 Query: 117 EEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 E +K LT +G +L E + + + Sbjct: 62 LVESNEGPSRKYYQLTVKGEIYLNELISEWNNFTDSVAKLLTEGDAVNE 110 >UniRef50_Q0TT89 Transcriptional regulator, PadR family n=9 Tax=Clostridium RepID=Q0TT89_CLOP1 Length = 110 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 5/106 (4%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 + G + +IL +L D +GYE+ K I ++ + G +Y L L++ L+ Sbjct: 5 KEIIKGHVESIILSLLQGKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVIS 64 Query: 116 REEE-----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 + G +K +TE G +L+E + + E ++ + G Sbjct: 65 YWGDCKSGGGRRKYFKITEDGVNYLKEKKSEWEFLKSIMNIFLGGE 110 >UniRef50_A8FCB2 PadR family transcriptional regulator n=7 Tax=Bacilli RepID=A8FCB2_BACP2 Length = 108 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 6/104 (5%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 G L +L I+S + +GYE+ K + G S G IYP L +Q++ L+T Sbjct: 4 STQMLKGILEGCLLSIISEGEIYGYEMTKKLA--HYGFDQISEGSIYPILLRMQKEQLVT 61 Query: 115 ----IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 +K LT+ G Q L E + + + + Sbjct: 62 TVTKASASGPKRKYYTLTQAGEQALTEFITRWSELSKNVNCLLQ 105 >UniRef50_C9L889 Transcriptional regulator, PadR family n=3 Tax=Clostridiales RepID=C9L889_RUMHA Length = 106 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G L IL I+S + ++GYE++ +++ G G IYP L L+++++I+ Sbjct: 4 KSQMMRGTLEGCILKIISVETTYGYEIVTKLQD--FGFEDMKEGTIYPILVRLEKKNMIS 61 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 + +K +LT +G + L E + + ++A Sbjct: 62 SQFRPSPLGPSRKYYSLTREGQEQLNEFEICWRSVSDTVEAILK 105 >UniRef50_A6C2L2 Transcriptional regulator, PadR-like family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2L2_9PLAN Length = 120 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 4/120 (3%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 R +R G + +L +L +GYEL++A+ T G +YP L LQ Q Sbjct: 1 MRIERELMRGAGPVAVLKLLEEGPKYGYELVEALSEQTGGILDMGQSTLYPLLYNLQSQG 60 Query: 112 LITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRA 167 LI +E +K +LT +G + L + Q + +++ + + + + A Sbjct: 61 LIRPSWQESESGRKRKYYSLTAKGKKRLASDTAQWGAVTSAMQSLGILSGTQPKLRGGEA 120 >UniRef50_Q8CV09 Hypothetical conserved protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8CV09_OCEIH Length = 115 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 6/107 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + G L IL ++S+ D +GYE+ A+ NL + + G IYP L + ++ Sbjct: 8 KWITQMKKGVYELAILLLVSKQDMYGYEINNALNNLPS--VSLAAGSIYPILKRMVNKNW 65 Query: 113 ITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 I+ + +K +TE+G ++ + E + + +++ G Sbjct: 66 ISFYWVDSEDGPRRKYYKITEEGESVAQKRISEYEELFDSLQSLRGG 112 >UniRef50_D2QHL5 Transcriptional regulator, PadR-like family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QHL5_9SPHI Length = 114 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 + L ++L IL+ +S+GYE+I+ I + G + G +YP L L+++ L+ Sbjct: 6 KELIAATLVPLVLTILADGESYGYEIIRNIRLRSAGQLDVAEGTLYPVLRKLEQRGLVQT 65 Query: 116 REE----EGGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 + E +K AL QG + L+ R MI + +++ Sbjct: 66 QWRTADNERQRKYYALKTQGREVLQAERANWNMINQLLQSL 106 >UniRef50_C6X192 Transcriptional regulator, PadR family n=2 Tax=Flavobacteriaceae RepID=C6X192_FLAB3 Length = 142 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L IL ++ + + + +LI A++ G G +YP L L+ ++ R Sbjct: 28 QMRKGILEFCILSLIDKREMYVSDLIDALKK---GKLDVVEGTLYPLLTRLKNGEFLSYR 84 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQ 163 EE +K +TE+G +L E + + E + PQ Sbjct: 85 WEESTGGPPRKYYQITEKGKLFLAELINTWQDLTESVNQITKNNNPTDAPQ 135 >UniRef50_A7IME8 Transcriptional regulator, PadR-like family n=2 Tax=Alphaproteobacteria RepID=A7IME8_XANP2 Length = 152 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE---EG 120 + IL +L + HGY++ +A+E T G +P+ G IYP L +E +T E Sbjct: 42 KFFILCVLHQRPMHGYDVARAVEATTNGCCSPAEGTIYPVLREFEEGGYVTAASEVVSGR 101 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEE 147 +K LT++G + E + Sbjct: 102 ERKVYTLTDKGRAAFKVAVEAWMDVTR 128 >UniRef50_B9JLC2 Transcriptional regulator protein n=39 Tax=cellular organisms RepID=B9JLC2_AGRRK Length = 119 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 8/102 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L L +L +LSR +S+GYE+ + G IYP + +Q L+ R Sbjct: 19 QLRKGALDLCVLAVLSRGESYGYEIASTLVAAVG----MGEGTIYPLMRRMQNDGLVATR 74 Query: 117 EEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 E +K LT G E +R + Sbjct: 75 IVESSNGPPRKYYRLTPLGRTIFEAHRRDWRSFAGAVDKLLE 116 >UniRef50_Q035B6 Transcriptional regulator, PadR family n=28 Tax=Lactobacillales RepID=Q035B6_LACC3 Length = 111 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 +Q G L +L +++ + +GYELI+A++ G + G IYP L L++ Sbjct: 1 MKQSQLLKGVLEGCVLATVAKGEIYGYELIQALQQ--AGFNSVMGGTIYPLLAKLEKNGD 58 Query: 113 ITIR----EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 + R E +K +TEQG L Q + + ++ Sbjct: 59 LASRMRPSPEGPDRKYYHVTEQGRTSLAAFERQWQQLVVQVATVLHKGDDADE 111 >UniRef50_C0VX09 PadR family transcriptional regulator n=5 Tax=Corynebacterium RepID=C0VX09_9CORY Length = 104 Score = 96.9 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 7/103 (6%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 G L +V+L +L++ S+G EL +E L + S G +YP L +++ + Sbjct: 2 DSQLRKGVLEMVVLTLLAKQPSYGGEL---LERLAAKDLEVSEGTLYPLLSRVKKAGYVD 58 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 E +K +T G L + Q + + A Sbjct: 59 TSWEPSPSGPPRKIYTVTTSGKNHLTDLTSQWQRFSASVSALV 101 >UniRef50_B5IFX4 Transcriptional regulator, PadR family protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IFX4_9EURY Length = 151 Score = 96.9 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 9/146 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI-REEEG 120 L+LVILDIL + HGY + + I+ + PS G+IYPTL L++ LI I E E Sbjct: 8 SLKLVILDILRMSELHGYGISEKIDEI-YRVGKPSSGIIYPTLSSLKKSGLIRICAEGER 66 Query: 121 GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN 180 KK ++T +G ++LEEN+E +E + +K ++ +K K + Sbjct: 67 DKKIYSITPKGIEYLEENKENLEKAKTMLKNLGEFYSMGGKKLVKDIEKLIKNMHK---- 122 Query: 181 QSDISDAQIKKIIAVIDRAAFDITQL 206 I + + K+I +I+R +I ++ Sbjct: 123 ---IGEDEKKRIAKIINRMHDEIEEI 145 >UniRef50_A7G0W2 Transcriptional regulator, PadR family n=9 Tax=Firmicutes RepID=A7G0W2_CLOBH Length = 106 Score = 96.9 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 4/100 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G + ++IL ++++DD +GY++ K I+ + Y+ G +YP L L+ + LI Sbjct: 2 DKEIMKGSIDILILTLINKDDLYGYKISKIIKKKSNMTYSMGEGTLYPALKRLESKKLIK 61 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIK 150 ++ G +K ++T G L+E Q + I + I Sbjct: 62 SYWKDNDLSGKRKYYSITPLGKSVLKEKLAQWDNITKLIT 101 >UniRef50_A8F9K7 Transcriptional regulator n=9 Tax=Bacteria RepID=A8F9K7_BACP2 Length = 105 Score = 96.6 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 7/106 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L +L +L + DS+GY++IK + S +YP L L++ + + Sbjct: 4 QLKKGLLEFCVLAVLKKGDSYGYQMIKDM----SHCIEISESTLYPILKRLEQNNYVETY 59 Query: 117 EEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR 159 +E +K +T+ G + + + + + + G Sbjct: 60 SQEHNSRLRKYYRMTQSGREHMAQFLAEWDQVMAIYDFISGGQGNE 105 >UniRef50_Q1IIL5 Transcriptional regulator, PadR family n=3 Tax=Acidobacteria RepID=Q1IIL5_ACIBL Length = 110 Score = 96.6 bits (239), Expect = 4e-19, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 R G L L+IL LS + HG+ + + I+ ++ G +YP L L+ + I Sbjct: 4 RSIDLPQGTLDLLILRTLSLEPLHGWAVSERIQQISSDVLQVQQGSLYPALHRLERRGWI 63 Query: 114 TIRE--EEGGK--KQIALTEQGAQWLEENREQVEMIEERIKARC 153 R E + K LT+ G + LE ++ + + Sbjct: 64 KARWGTSENNRKAKFYELTKAGRRQLEIEQDAWAKLTAAVSQVL 107 >UniRef50_D1PMS6 Transcriptional regulator, PadR family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMS6_9FIRM Length = 116 Score = 96.6 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 6/104 (5%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 Q G L IL I+SR+ ++GY + + G + G +YP L L + LI Sbjct: 14 QSQLRKGTLEGCILKIISREATYGYAIATTLRE--SGFTDLTEGTLYPLLLRLDRKGLIQ 71 Query: 115 IREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 G +K LT+ G Q+L E I A Sbjct: 72 AEYRAGHGGPSRKYYTLTDDGRQYLAEFMAAWRETSASIDAILQ 115 >UniRef50_C5NUR7 PadR family transcriptional regulator n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NUR7_9BACL Length = 108 Score = 96.6 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G L IL ++ + +GYE+ + + N G + G IYP L L+++ ++T Sbjct: 6 SQILKGTLEACILQLIKNKEMYGYEITEQLSN--YGLDMVAQGTIYPLLLKLEKEHMVTS 63 Query: 116 REEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 +E +K ++T+ G +++ + I I Sbjct: 64 YLKESTSGPPRKYYSITKNGEEYINSFKNVWGNISTTITNILE 106 >UniRef50_Q634X8 Transcriptional regulator, PadR family n=59 Tax=Firmicutes RepID=Q634X8_BACCZ Length = 111 Score = 96.6 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 6/112 (5%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 +GG G L IL I+S+++ +GYEL + G S G IYP L +Q Sbjct: 2 KGGEIMHSQMLKGVLEGCILYIISQEEVYGYELSTKLNK--HGFTFVSEGSIYPLLLRMQ 59 Query: 109 EQSLIT----IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 ++ LI +K +T++G + LEE ++ M+ + G Sbjct: 60 KEKLIEGTLKASSLGPKRKYYHVTDKGLEQLEEFKQSWGMVSTTVNNLLQGE 111 >UniRef50_C3L0X0 PadR-family transcriptional regulator n=2 Tax=Clostridium botulinum RepID=C3L0X0_CLOB6 Length = 115 Score = 96.2 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 3/106 (2%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G + +IL +L DS+GY L K + L+ + G +Y L+++ + Sbjct: 10 DKEVLRGYIDPIILCLLYDKDSYGYNLAKEAKELSNDKFELKEGTLYLAFKRLEKKGYVK 69 Query: 115 IREEEG---GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 +EG ++ +T +G +E + + + I++ + G Sbjct: 70 SYWQEGNAARRRYYHITAEGKMQVEAKKREWQFIKQLMDNFYKGVE 115 >UniRef50_Q8NLG3 Predicted transcriptional regulators n=4 Tax=Corynebacterium RepID=Q8NLG3_CORGL Length = 192 Score = 96.2 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 15/194 (7%) Query: 13 GQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILS 72 G + H H GR G R +LR VIL +L Sbjct: 14 RGSGEFRGRPGRRHAQRHAEGHGHGHHHGRRPGRGRGGRAGRG------DLRNVILVLLE 67 Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGA 132 + HGY++I I T+GN+TPSPG IYPTL L+++ LI+I E G+K LTE+GA Sbjct: 68 AESMHGYQIITTISEQTEGNWTPSPGTIYPTLSMLEDEGLISIS-HEMGRKMARLTEEGA 126 Query: 133 QWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKI 192 Q + +N++ I E + R + +R D + ++I Sbjct: 127 QEVAKNKDAWGSILEAYRNPESRE--------VRVFNIRSEFHKVREAAKAAPDDKAEQI 178 Query: 193 IAVIDRAAFDITQL 206 I ++ RAA DI +L Sbjct: 179 IEILRRAADDIKRL 192 >UniRef50_A7HN08 Transcriptional regulator, PadR-like family n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HN08_FERNB Length = 124 Score = 96.2 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 7/122 (5%) Query: 40 GQCCGGRHGRGGGR---RQRFFGHGE-LRLVILDILSRDDSHGYELIKAIENLTQGNYTP 95 + CG +HG+GG + F G+ L VIL +LS+ HGYEL + ++ + + Sbjct: 2 RRKCGCQHGQGGNIHRCEETGFSTGDFLTAVILKLLSQKPMHGYELYEKLQQVAYYPFKH 61 Query: 96 SPGVIYPTLDFLQEQSLITIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKAR 152 P VIY L L+ +I + EEG +K ++T+ G ++L E + ++E + Sbjct: 62 DPSVIYNILRKLEHHGIIEFKVEEGNGGLRKVYSITDNGIKYLNNLLELINTLKESFEKF 121 Query: 153 CV 154 Sbjct: 122 LE 123 >UniRef50_A5N8T7 Transcriptional regulator n=14 Tax=Firmicutes RepID=A5N8T7_CLOK5 Length = 112 Score = 96.2 bits (238), Expect = 7e-19, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 6/105 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 +Q G L +L I+ ++ +GYE+++ ++ G G +YP L L++Q Sbjct: 1 MKQTQLLKGVLEGCVLLIVLGNEVYGYEMVQLLKE--YGFRKIVAGTVYPLLQKLEKQGY 58 Query: 113 ----ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 I E +K +T +G + EQ E + + Sbjct: 59 LSSTIKPSPEGPDRKYYHITPEGRIHCQGFIEQWEDLASTVNNLI 103 >UniRef50_C0H3Y4 Putative DNA-binding protein yizB n=1 Tax=Bacillus subtilis RepID=YIZB_BACSU Length = 115 Score = 95.8 bits (237), Expect = 7e-19, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R F G L IL +L +GYEL +++ + S G IYP L + E+ Sbjct: 9 RWIVQFRKGIFELAILSLLRSKPMYGYELTSSLKTTSA--LAISEGAIYPILKRMTEKGW 66 Query: 113 ITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 I E+ +K +T++G + L+E E+ + + + Sbjct: 67 IEFFWEDSLDGPKRKYYKMTQKGEEMLKERLEKYLETHQALLSL 110 >UniRef50_Q635P9 Transcriptional regulator, PadR family n=92 Tax=Firmicutes RepID=Q635P9_BACCZ Length = 110 Score = 95.8 bits (237), Expect = 8e-19, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 6/109 (5%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G L +L I+S + +GYE+ + + G S G IYP L +Q++ I Sbjct: 4 SQMLKGILEGCLLAIISEGEIYGYEMSEKLAK--YGFTMASEGSIYPLLIRMQKEGFIKS 61 Query: 116 ----REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 +K LTE G L+E ++ E ++ ++ G R+ Sbjct: 62 VMKESPSGPKRKYYTLTEDGEDALDEFMDRWEAMQSSVERLLEGKGRRR 110 >UniRef50_Q3SN82 Transcriptional regulator, PadR family n=3 Tax=Nitrobacter RepID=Q3SN82_NITWN Length = 141 Score = 95.8 bits (237), Expect = 8e-19, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 14/146 (9%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G+LRLV L ++S HGY++I+ +E +T + PSP V++P L L E+ +T Sbjct: 6 SKGVAEGDLRLVALSLISEAPRHGYDIIQTVEKMTADWFLPSPNVVHPMLAKLVEERCLT 65 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + + ++T++G +LE++R++ + + R+KA + + ++ Sbjct: 66 ASADPP--RLFSITDEGRAYLEQHRDRADAVLNRLKA------------LGERVTRWRQA 111 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAA 200 L + Q + + ++ V+ RAA Sbjct: 112 LGVAERQKEADADSTEGLLDVLARAA 137 >UniRef50_D0LFT7 Transcriptional regulator, PadR-like family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LFT7_HALO1 Length = 107 Score = 95.8 bits (237), Expect = 8e-19, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG-- 121 R ++L L+ + HGYE+ + +E + G +T S G +YP L L+++ L++ E G Sbjct: 10 RFMVLLALAHEPKHGYEIARYLEERSGGYFTMSYGALYPVLHRLEKEKLVSATWCEAGGT 69 Query: 122 --KKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 KK LT +G L E RE + + G Sbjct: 70 RKKKVYTLTAKGQAALREEREDFDAFSLAFRKLLGG 105 >UniRef50_Q1IKN6 Transcriptional regulator, PadR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKN6_ACIBL Length = 125 Score = 95.8 bits (237), Expect = 9e-19, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 6/115 (5%) Query: 45 GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTL 104 + G R + G L + IL L + ++G E+I+ +E + + G IYP L Sbjct: 4 AKRDNGEDRWEAQLRKGALEMAILATLWQSKAYGLEIIRTLEERS--QLVLAEGTIYPIL 61 Query: 105 DFLQEQSLITIREEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 L+E + +T E +K ALT+ G + L++ E + Sbjct: 62 SRLKEDAFLTSEWVEADAGHPRKYYALTKAGRERLQKMAEAWVDFSRNLSRLVAP 116 >UniRef50_A6CPP9 Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPP9_9BACI Length = 134 Score = 95.8 bits (237), Expect = 9e-19, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 6/112 (5%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G L IL ++ ++GYEL + T+G + S G IYP L LQ++ LI Sbjct: 19 KSQILKGILEGCILAVIEESPTYGYELYVKLA--TKGMDSVSEGSIYPILLRLQKEGLIK 76 Query: 115 ----IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 +K +LTE+G LE + + I G Sbjct: 77 GKMQKSASGPNRKYYSLTEEGKAALEVFSSEWAKLGTAIDLILKGGEKDDGQ 128 >UniRef50_A2RJ61 Transcriptional regulator, PadR-like family n=13 Tax=Lactobacillales RepID=A2RJ61_LACLM Length = 114 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 41/103 (39%), Gaps = 6/103 (5%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI- 113 G L+ +L ++++ +GY + + + G G IYP L ++++ LI Sbjct: 7 SSQMLKGILQGCLLILINQRPYYGYAISQELSE--YGFADIPKGTIYPLLTSMEKKGLIL 64 Query: 114 ---TIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 +E +K +T+ G Q + + ++ + Sbjct: 65 GKVEPSKEGPQRKYYYITDTGKQARKVFLAKWNILSLSVNDLI 107 >UniRef50_Q5WJB0 PadR family transcriptional regulator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WJB0_BACSK Length = 107 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G L L+IL +S+ D +G ++K I + + Y S G +Y L L+++ L++ Sbjct: 2 DKEQLKGNLDLIILAHVSKTDDYGGAIVKKIYDESNQQYKMSEGTLYSLLKRLEKKGLLS 61 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 + G ++ ++T+ G +E E I + I+ G Sbjct: 62 SYWGDETNGGRRRYYSITDAGKVTFKEKLESWRSINKMIENSIRGG 107 >UniRef50_D2PES9 Transcriptional regulator PadR family protein n=9 Tax=Sulfolobus RepID=D2PES9_SULIS Length = 131 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%) Query: 59 GHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE 118 L+ +IL +LS+ G +++ IE + G + PSPG +YP LD L+ + LI I + Sbjct: 5 RRRGLKWLILYVLSKGTMTGAQIMDEIEKTSYGMWRPSPGSVYPALDALESEGLIRISKV 64 Query: 119 EGGKKQIALTEQGAQW---------LEENREQVEMIEERIKARCVGAALRQNPQMKRALD 169 +G KK LTE+G + ++E EQ+E I ++K LD Sbjct: 65 DGWKKYYELTEEGRKAIGVMSEEDKVKEAIEQLEFSARYIVENLEKLNDEDKRKVKNILD 124 Query: 170 NFKAVLD 176 V+ Sbjct: 125 ELSKVMR 131 >UniRef50_C5BZX9 Transcriptional regulator, PadR-like family n=2 Tax=Micrococcineae RepID=C5BZX9_BEUC1 Length = 136 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 8/125 (6%) Query: 43 CGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP 102 GG+H R G L +++L +L+ +S+GY L+ + + G + G +YP Sbjct: 8 PGGQH--HEPLRDTQLLKGVLPMLVLALLAHSESYGYALVMRLRD--AGLTDIATGTVYP 63 Query: 103 TLDFLQEQSLITIR----EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 L L+ + ++ R +K A T G + R Q + + + A A Sbjct: 64 VLTRLEREGSLSARLVPSSSGPARKYYAPTPAGLAAMAAQRTQWDRLSGVVDAAVPRPAG 123 Query: 159 RQNPQ 163 Sbjct: 124 TDPAP 128 >UniRef50_A4G020 Transcriptional regulator, PadR family n=4 Tax=Methanococcus maripaludis RepID=A4G020_METM5 Length = 152 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 10/155 (6%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + +++IL L + HGY LI I +T + SP ++YP L L+ L Sbjct: 1 MKHTRKIKELTKILILKFLEEEPLHGYLLISKIGEITG--ISVSPSMVYPILSNLKTNGL 58 Query: 113 ITIRE-EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNF 171 I + + E+ GKK LTE G +L+ENRE+V+ ++ +A + ++K+A+ Sbjct: 59 IEVEKTEDRGKKIYKLTETGHSFLDENREKVDYCMKKSEALYYFHNGGGS-ELKKAVHLA 117 Query: 172 KAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 +I D + KKI ++ + A DI L Sbjct: 118 FEEF------MNIDDEKRKKIGEIMQKCAKDIRYL 146 >UniRef50_A0NMS3 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NMS3_9RHOB Length = 185 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 10/138 (7%) Query: 62 ELRLVILDILSRDDSHGYELIKA-IENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE- 119 +R + L ILS D+ GYE+ K E S G IYP L L+ + +T+REE Sbjct: 2 SVRSLCLAILSFGDATGYEIRKESTEGRFSYFDDASFGSIYPALARLESEGFVTVREEPQ 61 Query: 120 ---GGKKQIALTEQGAQWLEENR---EQVEMIEERIKARCVGAALRQNPQMKRALDNFKA 173 +K ++T+ G Q ++ + + + + AA ++RA++ K Sbjct: 62 AGKPARKVYSITDAGRQDFIQSLCDPQAPDTFKSPFLLIALNAAKLPPEVIRRAIERRKT 121 Query: 174 VLDLRVNQSDISDAQIKK 191 ++ + ++D + + Sbjct: 122 QVEAELRL--LTDNEKDQ 137 >UniRef50_C3B6A2 Transcriptional regulator n=3 Tax=Bacillales RepID=C3B6A2_BACMY Length = 114 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS----L 112 F G L L +L ++ R D +GYEL++ I N S G +YP L L ++ Sbjct: 15 QFKKGVLELCVLALVKRKDCYGYELVQQISNKFL----ISEGSVYPLLRRLTKEGYFQTY 70 Query: 113 ITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 + E +K LT QG + L ++ Sbjct: 71 LKESTEGPPRKYYQLTNQGEEQLHLLVTDWRDFARGVQEIIE 112 >UniRef50_A1R446 Putative transcriptional regulator, PadR family n=1 Tax=Arthrobacter aurescens TC1 RepID=A1R446_ARTAT Length = 127 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 6/121 (4%) Query: 44 GGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPT 103 G G + L + L LS S+GY +I +E G T G +YP Sbjct: 6 PGPPTSEGADWPSDWLRATLGFLSLHALSAGPSYGYAIISELER--HGFGTIKGGTLYPL 63 Query: 104 LDFLQEQSLITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR 159 L + L+T G G+K ALT++G ++ E K G + Sbjct: 64 LTRYEAAGLVTTEWRAGDGGPGRKYFALTDRGRTEVKRLSADWLRFTELSKRYLDGQDTK 123 Query: 160 Q 160 + Sbjct: 124 E 124 >UniRef50_D1BE53 Transcriptional regulator, PadR family n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BE53_SANKS Length = 126 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 49 RGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQ 108 G + G + IL L + +G+++ + +E G S G +YP L L+ Sbjct: 3 PGQSQALANLRRGVVEHCILASLRSGERYGFDIARDLE----GTLLASAGTLYPLLSRLR 58 Query: 109 EQSLITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 + L+ +E ++ LT+ G L+ + + A Sbjct: 59 KTGLVASSWQESTEGPPRRYYRLTDDGEAALQAFESAWVPFRDAVDAAL 107 >UniRef50_C7IM16 Transcriptional regulator, PadR-like family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IM16_9CLOT Length = 190 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 7/138 (5%) Query: 65 LVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG--- 121 +IL +L+ +DS GY+L K I+ + + G +YPTL L++ ++T R E Sbjct: 9 FIILGLLNHEDSSGYDLKKKIDYMISRFWEVGYGQLYPTLSQLEKGGMVTKRTGENSKGP 68 Query: 122 -KKQIALTEQGAQWLEENRE---QVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 K ++T +G + L+E E + I + + + ++NFK Sbjct: 69 EKSVYSITAKGREVLKEWLSVPGAKEYTKYEILLKLFFGNMVSYRENVERIENFKERHIN 128 Query: 178 RVNQSDISDAQIKKIIAV 195 + + ++K+I Sbjct: 129 DLKMIQMYKTNLEKVIEK 146 >UniRef50_A7VRI9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VRI9_9CLOT Length = 110 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G L + +L +L D +GY++ + S G +YP L L+++ ++ Sbjct: 4 QFKKGVLEMCVLVMLESGDRYGYDIANELSQS----IAISNGTVYPILRRLKQEEYVSSY 59 Query: 117 EEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 E +K A+T QG + + + + ER+ A Sbjct: 60 LVESPGGAPRKYYAITPQGKRLADSLKTEWLSFSERVTAMIQ 101 >UniRef50_D1YZ73 PadR-like family transcriptional regulator n=2 Tax=Methanocella paludicola SANAE RepID=D1YZ73_METPS Length = 175 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 3/127 (2%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 L +L +L + HGY L++ IE TQG++ PS IY L+ L+ IT EE+ Sbjct: 14 RASLNYFVLMLLRTNPKHGYMLMQDIERHTQGHWRPSHSAIYKLLNRLETDGYITSWEEK 73 Query: 120 GG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 G ++ ++++G LE + E + + A + L L Sbjct: 74 DGERVRRVYQISKEGVALLEASDRDFESFINAFISSLLEAERVNPDHLTILLTKKGKALM 133 Query: 177 LRVNQSD 183 + + Sbjct: 134 NALEPDE 140 >UniRef50_B1L3Y8 Transcriptional regulator, PadR-like family n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L3Y8_KORCO Length = 149 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 10/147 (6%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G RL++LD + + HGYE+++ I + PSPGV+YPTL L+ + L+ E Sbjct: 8 KGLFRLLVLDAIREEPLHGYEIMRRIGDTLGH--PPSPGVVYPTLRSLESEGLVRS-GRE 64 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRV 179 G + ++TE G ++L+EN +++ ER + + + + L+ Sbjct: 65 GRRTVYSITEDGVKYLKENEDRIRCFMERADRIKILKKMVPH-DIFPLLEEL------AS 117 Query: 180 NQSDISDAQIKKIIAVIDRAAFDITQL 206 +++ Q ++ R D++++ Sbjct: 118 KYGRMTEEQRDEVRRAFWRLIQDLSRI 144 >UniRef50_C8WPF3 Transcriptional regulator, PadR-like family n=12 Tax=Bacteria RepID=C8WPF3_EGGLE Length = 104 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L + +L ++R DS+GY+++K + + + +YP L L+ L+T+ Sbjct: 4 QLKRGFLDVCVLASINRQDSYGYQIVKDVPSSLH----LTESTLYPLLKRLESAGLLTVY 59 Query: 117 EEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 E +K +T G +L+E + + + + + GA Sbjct: 60 AIEHNGRLRKYYRITPAGVTYLDEFLKDWDDVLDVYEYVKRGANR 104 >UniRef50_C5CF63 Transcriptional regulator, PadR-like family n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF63_KOSOT Length = 180 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 7/137 (5%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGK 122 + VIL LS GY++ + + T Y S G IYPTL L+++ +T +E G+ Sbjct: 1 MEEVILGFLSSGAMTGYDIKQVMSVSTSFFYDASYGSIYPTLKKLEKKGFVTSKEVVEGR 60 Query: 123 KQ---IALTEQGAQWLEENREQVEMIEER----IKARCVGAALRQNPQMKRALDNFKAVL 175 K +LT++G + + E+ + L ++ + + + Sbjct: 61 KVKVFYSLTDKGRKEFLKWLEKPSAPANTKYEFLAKLFFARHLPKDRLLAMVSRHISEIR 120 Query: 176 DLRVNQSDISDAQIKKI 192 ++ I Sbjct: 121 EVLSKLQMIEKEMKNHA 137 >UniRef50_C8Q356 Transcriptional regulator, PadR-like family n=1 Tax=Pantoea sp. At-9b RepID=C8Q356_9ENTR Length = 110 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE- 118 + +VIL L R SHGY LI+ I LT G + G +YP L ++++ LI E Sbjct: 10 KSHIEMVILAALERGPSHGYALIELIHQLTDGVLSFQEGTVYPLLHRMEQRGLIGAEWEI 69 Query: 119 ---EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 + ++ LT++G Q L RE + + + + Sbjct: 70 APSKRKRRVYQLTKEGQQELVRKREAWDSYSLAVSSLLQRS 110 >UniRef50_Q022R8 Transcriptional regulator, PadR family n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022R8_SOLUE Length = 108 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 4/108 (3%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + G L L++L +L HGY + + I L+ G +YP L + + Sbjct: 1 MAKTELVPGTLILLVLRVLQTGPLHGYAIAQRISQLSSDVLRVEEGSLYPALQKMLMKGW 60 Query: 113 ITIREE--EGGKKQ--IALTEQGAQWLEENREQVEMIEERIKARCVGA 156 + E E ++ LT G + L + + I++ A Sbjct: 61 VQSEWELSETKRRVRSYRLTAAGRKQLAAELAGYDQVNRAIQSVLKLA 108 >UniRef50_C4L5F0 Transcriptional regulator, PadR-like family n=8 Tax=Firmicutes RepID=C4L5F0_EXISA Length = 118 Score = 95.0 bits (235), Expect = 2e-18, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 5/113 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G + +IL +L+ D +GYE+ K + T + G +Y +L L+++ + Sbjct: 4 DKEMLKGHIDTMILSLLNTQDMYGYEIAKVVHTRTDEAFELKEGTLYLSLKRLEKKGSVE 63 Query: 115 IREEE-----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 + G +K +T G L + + ++++ + Sbjct: 64 SYWGDEQGPGGRRKYYRITTDGQAVLARKKVEWRLVKQLMNLFLHEEGDSFEA 116 >UniRef50_D1BAH9 Transcriptional regulator, PadR family n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BAH9_SANKS Length = 114 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 + L +L I+S +++GY + + + + G G +YP L L++ + Sbjct: 6 WPAEWLRSALSGAVLSIVSEGETYGYVIAQRLAD--GGMGVVKGGTLYPLLARLEQDGDV 63 Query: 114 TIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 T EG G+K ALTE G LE +R E A +G Sbjct: 64 TATWREGTSGPGRKYYALTEAGTVRLEAHRRDWAAFTEASTAIIMG 109 >UniRef50_B9LRB4 Transcriptional regulator, PadR-like family n=4 Tax=Halobacteriaceae RepID=B9LRB4_HALLT Length = 210 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 2/157 (1%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ G + ++L++L+ +GYEL+ I ++ G++ PS G +YP L +E+ + Sbjct: 1 MRKSGPPKGLISYLVLELLAERPRYGYELLGDITEISGGHWEPSYGSVYPILYKFEEEGV 60 Query: 113 IT--IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDN 170 R +E +K ALT+ G + L E R ++ + +G Sbjct: 61 AERVERADEPDRKYFALTDAGREELVEKRREIGAEAKEFGDVVLGFYHLYAALATDDRFE 120 Query: 171 FKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 S +++II +R ++D Sbjct: 121 VDDAEGEWAYSERYSAWIVEQIIRHHERDFGAFERID 157 >UniRef50_C0GEI8 Transcriptional regulator, PadR-like family n=2 Tax=Bacteria RepID=C0GEI8_9FIRM Length = 111 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 6/107 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + G + IL I+S+ ++GYE+ + + G S G +YP L L+ + Sbjct: 1 MKSPQLLKGVIEGAILKIISQKSTYGYEIYQILMQ--YGFKDFSEGSLYPLLVRLETKQY 58 Query: 113 ITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 I ++E +K LT G + LE + + + A G Sbjct: 59 IRSEKKESPLGPDRKYYYLTSFGEEQLESFTGSWQNLVSSMDALWGG 105 >UniRef50_D1BEF8 Predicted transcriptional regulator n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BEF8_SANKS Length = 128 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 6/103 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 + G L L +L+R +HGY +++ ++ G G +YP L+ L+ +T Sbjct: 9 EWLRGLLGTCALAVLARGSAHGYAVVQQLQA--AGLGPIKGGALYPVLNRLERDGAVTAE 66 Query: 117 EEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 EG G+K LT G LE R+ + + Sbjct: 67 WREGEGGPGRKVFTLTPDGRAHLESLRDGWGPFAQTVAGLLDA 109 >UniRef50_Q2FNW6 Transcriptional regulator, PadR family n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FNW6_METHJ Length = 162 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 4/136 (2%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQ-IALTEQ 130 + GYEL+K I+ T + P+ G +YP L L+++ LI ++E K LTE Sbjct: 30 EKKPQSGYELLKEIDETTDSTWVPNKGTLYPLLKSLEQEGLIQVKEVGKRSKITFELTED 89 Query: 131 GAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIK 190 G Q L + + E E R+ L + + ++D+R D+ + + Sbjct: 90 GRQMLSTLKGKKEEAETRVT---FFKKLHREVFGEENFSFINFMMDVRFYVEDLPEEKKP 146 Query: 191 KIIAVIDRAAFDITQL 206 I ++ A +I L Sbjct: 147 AAIKILQTAFDEIKNL 162 >UniRef50_Q97LI9 Predicted transcriptional regulator n=2 Tax=Clostridiales RepID=Q97LI9_CLOAB Length = 107 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS---- 111 G L L +L IL R D +GYEL+ I S G IYP L L ++ Sbjct: 3 TQLKKGILELCVLSILDRKDCYGYELVDEISKS----IEISEGTIYPLLRRLSKEGFFTT 58 Query: 112 LITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 + E +K LTE G + ++ E+ E + + GA + Sbjct: 59 YLQESTEGPPRKYYKLTELGREEKQKLVEEWMEFVEGVNSILKGAQQHE 107 >UniRef50_A5HXZ4 PadR-family transcriptional regulator n=15 Tax=Clostridiales RepID=A5HXZ4_CLOBH Length = 112 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 47/111 (42%), Gaps = 6/111 (5%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G L IL I++ +++GYE+ + ++ G S G IYP L L++ + + Sbjct: 4 KSQLLRGTLEGCILKIINDKETYGYEIAENLK--LYGFKDISEGTIYPLLIRLEKNNFLN 61 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 ++ +K L+E+G + L ++ + + ++ Sbjct: 62 STKKPSPYGPKRKYYTLSEKGVEELNYFYTNWLELKNSVDKIFSNYSKGED 112 >UniRef50_Q73NW7 Transcriptional regulator, PadR family n=1 Tax=Treponema denticola RepID=Q73NW7_TREDE Length = 108 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 4/102 (3%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G +IL L DS+GYE+ K I + + + +Y L+ L+T Sbjct: 6 EILRGLTDTLILGRLYSKDSYGYEINKQIHQKSSSLFQLTEATLYTAFRRLEAAGLLTSY 65 Query: 117 EEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 +G ++ ++T+ G + EN E I Sbjct: 66 WGDGDTGARRRYYSITKTGKKLYRENVNDWEEFSAAISGLLE 107 >UniRef50_Q977Z7 Putative uncharacterized protein TVG1573729 n=2 Tax=Thermoplasma RepID=Q977Z7_THEVO Length = 155 Score = 94.6 bits (234), Expect = 2e-18, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 13/165 (7%) Query: 42 CCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIY 101 GG G G R G +R IL IL+ + G +++ IENLT G + PSPG +Y Sbjct: 1 MFGGMRGPCGHHVDRSRGFVGIRYWILRILADGEKTGADIMTTIENLTMGRWRPSPGAVY 60 Query: 102 PTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 P L L+E+ I E + KK +L E+G + + + + + Sbjct: 61 PILRALEEEGYIKGTERD-NKKYYSLLEKGKE-----------MIDMLGFGKFYGRDVET 108 Query: 162 PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 + A++ ++ + S I + + DI L Sbjct: 109 TNLYDAVERIGDYVNYLKDNSSKLKDDKDAI-EKLRKIRDDIEGL 152 >UniRef50_C7IIU2 Transcriptional regulator, PadR-like family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IIU2_9CLOT Length = 102 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G + + IL I+S+ D +GY+++K + L + Y L L ++ L + Sbjct: 4 QIKKGVIDMCILHIISKQDMYGYDVMKQMGALFP---EVNDSTFYVILRRLNKEKLTEVY 60 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 + +K +TE G L E+ + + + + + Sbjct: 61 WGKDSNGPPRKYYHITEAGKNALVEDIDNWRKLIDIVSSI 100 >UniRef50_Q5WAR4 PadR family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WAR4_BACSK Length = 112 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 7/105 (6%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G L IL ++ +GYEL + +E G S G IYP L LQ+Q L+ Sbjct: 4 RSQLLKGVLPACILAVIDSQPVYGYELAQKLEE--SGLPEISDGTIYPILLRLQKQKLVY 61 Query: 115 -----IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 +K LT +G L + R + I + Sbjct: 62 SEMRPSESGGPKRKYYFLTAEGKNELWQMRAEWGAIASPVSTMLK 106 >UniRef50_Q01N73 Transcriptional regulator, PadR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01N73_SOLUE Length = 111 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 4/106 (3%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 + G L L+IL L R HGY + + I L+ T G +YP L L+ + Sbjct: 3 KSTTLLQGTLDLLILHSLGRGPLHGYAIAQTIHLLSDEVLTVEEGSLYPALYRLELDGAL 62 Query: 114 TIRE--EEGGK--KQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 + E + K +T +G + + + + + + + Sbjct: 63 SSSWGLSENNRKAKYYEITRRGRKLIADQHQAWDRLSAAVDRVLAR 108 >UniRef50_D1C8Q3 Transcriptional regulator, PadR-like family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8Q3_SPHTD Length = 129 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 6/102 (5%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G L +L +L + +G+EL++ + S G IYP L L + L+ Sbjct: 8 TQMRRGALEACVLALLEDEARYGFELVQRLGQ--APALLTSEGTIYPLLSRLHRERLVET 65 Query: 116 REEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 E +K LT +G + L R+Q + + Sbjct: 66 EWRESPAGPPRKYYRLTPRGREALAVFRQQWVEFRDAVDGVL 107 >UniRef50_C1YU51 Predicted transcriptional regulator n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=C1YU51_NOCDA Length = 395 Score = 94.3 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 73 RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGA 132 + HGYE+I + + G Y+PSPG IYP L L+E+ L+T E EGG+K +LT++G Sbjct: 20 ENPRHGYEIISLLRDRFLGVYSPSPGTIYPRLARLEEEGLVTHTE-EGGRKVYSLTDKGR 78 Query: 133 QWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 + L E + +E I A ++ + + + L Sbjct: 79 EELRERENDLNDLEREITDSVRDIARAVKQDVRATISSLRDELK 122 >UniRef50_C6J093 Transcriptional regulator PadR family protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J093_9BACL Length = 130 Score = 94.3 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 55 QRFFGHGELRLVILD-ILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 R G + +IL +L D++GYE++K+I +++QG Y +Y +L L+ Q LI Sbjct: 18 SRDLIRGHIDTIILRVLLEEGDNYGYEIMKSISSISQGRYELKEPSLYTSLKRLEAQKLI 77 Query: 114 TIREEE-----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 E G +K +T GA+ + N + E I Sbjct: 78 ESYWGEDRSLGGRRKYYHVTPAGAEVYKANLAAWKFSREIIDVLIEKQEGSP 129 >UniRef50_A8MBR3 Transcriptional regulator, PadR-like family n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MBR3_CALMQ Length = 144 Score = 94.3 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 12/140 (8%) Query: 58 FGHGELRLVILDILS-RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G LR ++L IL+ + + G ++I IE + G + PSPG IYP LD L+E+ LI I Sbjct: 11 RRRGALRDIVLYILAFKGELTGAQIIDEIERWSFGFWRPSPGSIYPLLDDLEEEGLIKIS 70 Query: 117 EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 +G KK +LTE+G + + I + + + ++D Sbjct: 71 RIDGVKKYYSLTEEGKRAI-----------GLIGGINPPPPPPSPFNIDEFVSAARYIID 119 Query: 177 LRVNQSDISDAQIKKIIAVI 196 +I++I+ + Sbjct: 120 NWDKIPQEDKEKIRRILNDL 139 >UniRef50_Q17ZV3 PadR-family transcriptional regulator n=7 Tax=Clostridium RepID=Q17ZV3_CLOD6 Length = 177 Score = 94.3 bits (233), Expect = 3e-18, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 6/135 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L +IL L + GY+L + + T + S G IYP L L+ + I E G Sbjct: 8 LEYIILGFLMEKELSGYDLKQIMSESTSYFFDASFGSIYPALKRLETKGYIHYHEVIDGS 67 Query: 122 --KKQIALTEQGAQWLEENREQVEMIEERIKARC---VGAALRQNPQMKRALDNFKAVLD 176 KK ++T G + E ++ + + ++ L ++ Sbjct: 68 KLKKLYSITNTGKEVFLEWLKKPINFSKTKQDHLVNIFFYKYLPKEIIETNLKMLITEVE 127 Query: 177 LRVNQSDISDAQIKK 191 L +N+ ++ Sbjct: 128 LLLNKLSKQKNDAEE 142 >UniRef50_Q1IS64 Transcriptional regulator, PadR family n=2 Tax=Acidobacteria RepID=Q1IS64_ACIBL Length = 121 Score = 93.9 bits (232), Expect = 3e-18, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 4/113 (3%) Query: 50 GGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQE 109 R G L++L +L HGYE+ + IE ++G + YP L L++ Sbjct: 9 HRATLDRELKKGSAELLVLSLLEGRPRHGYEISQMIELRSEGAVRFNVASFYPLLYRLEK 68 Query: 110 QSLITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 + I R E ++ LT QG Q L+E + ++ Sbjct: 69 RGWIVGRWVEKAGQRRRRYYRLTAQGKQTLKEQQSTWLQFVAAMQRITGLRHA 121 >UniRef50_Q01VZ7 Transcriptional regulator, PadR family n=5 Tax=Acidobacteria RepID=Q01VZ7_SOLUE Length = 123 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L +++L L +HG+++ K I+ + G +YP L L+ + I + Sbjct: 15 QLLQGTLDMLVLRTLMFGPAHGHQISKHIQRTSDDLLQVEHGSLYPALHRLERKGWIAAK 74 Query: 117 EEEGGK------KQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 E G K LT G + L + + + A Sbjct: 75 WETAGTDRKREFKYYRLTAAGRKQLVAEESKWRKLTGAVARIMWPAG 121 >UniRef50_D2LSP7 Transcriptional regulator, PadR-like family n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LSP7_BACS4 Length = 117 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 6/109 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L IL ++ + +GYEL + + + +T + G IYP L + + I Sbjct: 11 QLKKGVYELAILLLIRKKAMYGYELTQRLNQV--PLFTLAEGSIYPILKRMVTKQWIESY 68 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 +E +K +TE+G +E + + + ++ G ++ N Sbjct: 69 WQESADGPRRKYYEITEEGKVVVELRMNDYKELYKALEHLKEGNDVKDN 117 >UniRef50_A7VGD7 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VGD7_9CLOT Length = 133 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 F G L ++IL I+S + +GY ++ G +YP L L+E I Sbjct: 26 QFKKGILPMLILQIISDEKDYGYNIVNRFNARCVAGMDIKEGTLYPILHRLEEDGAIASE 85 Query: 117 EE-----EGGKKQIALTEQGAQWLEENREQVEMIEERIKAR 152 KK +TE+G LEE IE ++ Sbjct: 86 WVMTSENGKPKKFYKITEEGKLLLEEQWNCWMQIEGMVRDF 126 >UniRef50_UPI00016C509A Predicted transcriptional regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C509A Length = 116 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 6/102 (5%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 G L L +L L D +GY+++K + + G IYP L +++ L+ Sbjct: 9 WTTQMRKGLLELCVLATLKGDRVYGYDIVKRLSAVDG--LVIGEGTIYPILSRFKKEGLV 66 Query: 114 TI----REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKA 151 E +K LT +G + L + I Sbjct: 67 DATLAESPEGPARKYYRLTARGQEMLARMLAAWAEVRTGIDT 108 >UniRef50_D2QIH5 Transcriptional regulator, PadR-like family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QIH5_9SPHI Length = 135 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L IL I+SR + + ++ ++ LT G +YP L L+ L+ + Sbjct: 9 QMRKGILEFCILHIISRGEIYASDM---LDELTSARIMVVEGTLYPLLTRLKNAGLLDYK 65 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 E +K LT+ G LE + + E + A Sbjct: 66 WVESTSGPPRKYYILTDLGRTSLEALNATWQELAESVNAIV 106 >UniRef50_C7QBA1 Transcriptional regulator, PadR-like family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QBA1_CATAD Length = 277 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 49/101 (48%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQG 131 + HGYE+I+ ++ QG Y PS G +YP L L+ + LI +E G+K +T+ G Sbjct: 19 AESPKHGYEIIQQLKERFQGLYAPSAGTVYPRLSRLESEGLIRHETDERGRKVYHITDAG 78 Query: 132 AQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 L + ++ +E I+ A ++K + + + Sbjct: 79 RTELAARADDMDALETEIRESVSSLAEEIRDEVKESARHIQ 119 >UniRef50_A6W6T2 Transcriptional regulator, PadR-like family n=1 Tax=Kineococcus radiotolerans SRS30216 RepID=A6W6T2_KINRD Length = 219 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 5/145 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 ++R +L +L+ S+GY +I + + G + PSPG +YPTL LQ++ L+T + Sbjct: 69 DVRAAVLVLLAEGPSNGYRIIGEVTRRSDGEWKPSPGSVYPTLQQLQDEGLVTADPADP- 127 Query: 122 KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQ 181 KQ LTE+G + +E + E + G ++ Q+++ + + V Sbjct: 128 -KQFTLTEEGRRHVEAEYSRTPPPWEDL-GGGGGDHRERSHQLRKQIASIAMTYQQIVVS 185 Query: 182 SDISDAQIKKIIAVIDRAAFDITQL 206 D + + V+++A ++ + Sbjct: 186 GRPGD--LDRAGDVLEKARRELLAI 208 >UniRef50_C7IBX7 Transcriptional regulator, PadR-like family n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IBX7_9CLOT Length = 307 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 67/148 (45%), Gaps = 10/148 (6%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT----IRE 117 ++L IL ILS S GYEL K E+ + ++ + IY L L+++ +T ++ Sbjct: 2 SIQLAILGILSWRPSTGYELKKIFEDSSFMYWSGNNNQIYKALTNLEDEGFVTNELIHQD 61 Query: 118 EEGGKKQIALTEQGAQWLEENR---EQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 KK +TE G + L+ + I++ + + + N ++ L ++ Sbjct: 62 NSPSKKIYTITEDGLKELKNWLLSSPEAPEIKKTFLVQFAWSDILSNEELSELLSKYENE 121 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFD 202 + L++ + + ++ + +R+A + Sbjct: 122 IKLQLI---MEKEKYRRALHSPNRSARE 146 >UniRef50_C1RQ14 Transcriptional regulator, PadR family n=3 Tax=Actinomycetales RepID=C1RQ14_9CELL Length = 121 Score = 93.5 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 6/111 (5%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 + G L L L +L+ ++GY++ + + G G +YP L L L+ Sbjct: 13 WPGDWLRGVLSLCALRVLADGPTYGYDIAQRLAAAGLGEIKG--GTLYPLLGRLAVAGLL 70 Query: 114 TIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 G G+K ALT G L + + + + + Sbjct: 71 DEEWRPGDGGPGRKYYALTPAGRTHLRDESARWSRFADLTQTFVTSPEADR 121 >UniRef50_A9A325 Transcriptional regulator, PadR-like family n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A325_NITMS Length = 169 Score = 93.5 bits (231), Expect = 5e-18, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 12/161 (7%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 R G R IL++L + + G E+I + G + PSPG+IYP L L ++ Sbjct: 6 FQRVGSSVPRGFSRYFILELLKKKEQTGKEIIDYAVEQSNGIWKPSPGLIYPLLGRLLDE 65 Query: 111 SLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDN 170 LI +E + GK LTE+G E + V+ + + +K + N A+D Sbjct: 66 GLI--QETKDGK--YQLTEKG----AETAQDVDKVNDIVKKQLDVLFRLGNVGRFVAMDL 117 Query: 171 FKAV----LDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD 207 + + L N ++++ + +K + I D Sbjct: 118 LEKISSMGAILSSNVANMTTEETEKYRKFLQEELKKIDAKD 158 >UniRef50_A8TFR8 Transcriptional regulator, PadR-like family n=1 Tax=Methanococcus voltae A3 RepID=A8TFR8_METVO Length = 158 Score = 93.1 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 11/153 (7%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R + +IL +S HGY+LI I G SP IYP L ++ I Sbjct: 1 MRTKKKELMEYLILHHISEKPYHGYKLICDISKDI-GVPKISPSFIYPVLSKFTKKEYIK 59 Query: 115 IREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 + + KK +T+ G ++L+EN E++ I E K +L N +V Sbjct: 60 VILHD-DKKVYEITDLGVEYLKENSEKLNEILESTKNIREFHSLGGN--------KLHSV 110 Query: 175 LDLRVNQ-SDISDAQIKKIIAVIDRAAFDITQL 206 + + S KK+ + I A ++ ++ Sbjct: 111 YRVIHTEYSKFDPETKKKVSSCILNFANELEKI 143 >UniRef50_C1A3M6 PadR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3M6_GEMAT Length = 117 Score = 93.1 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 4/116 (3%) Query: 44 GGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPT 103 +R +G L ++IL +S HGY + + I+ +T G + G +YP Sbjct: 2 PTPKTPKQDLPRRELPNGTLEMLILKTISVGTMHGYGIAQHIQRVTDGVLSAEQGSLYPA 61 Query: 104 LDFLQEQSLITIRE--EEGGK--KQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 L+ L + T + G+ + +T G + L E + I+ Sbjct: 62 LERLLNKGHATAKWAQTSTGRQARIYTITASGRKQLAARMADYEQVSLAIERLLQA 117 >UniRef50_A2TYI9 Transcriptional regulator PadR-like family n=7 Tax=Bacteroidetes RepID=A2TYI9_9FLAO Length = 112 Score = 93.1 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 4/108 (3%) Query: 57 FFGHGELRLVILDILSRD-DSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G L+ +IL +L+ + +GYE+ + ++ LT+G + G +YP L L+ L+ + Sbjct: 5 KLYKGSLQTIILKLLASNTKMYGYEITQKVKELTKGELKITEGALYPALHKLEADGLLDV 64 Query: 116 REEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 + G +K LTE G + E+++ + ++ + Sbjct: 65 EVAKVGNRLRKYYKLTENGTKETANKLEEMQDFLKTMQHLVNPKFSLE 112 >UniRef50_Q2RGC9 Transcriptional regulator, PadR family n=3 Tax=Bacteria RepID=Q2RGC9_MOOTA Length = 372 Score = 92.7 bits (229), Expect = 6e-18, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%) Query: 55 QRFFGHGELRLV-----ILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQE 109 R + +G +++ IL +L HGYE+ + + +T+G TP+ G IYP L +E Sbjct: 5 DREYWNGIIKMCLSKFFILRVLYTQPMHGYEIARTVAQVTRGCCTPTEGTIYPVLREFEE 64 Query: 110 QSLITIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 +T E G +K LT +G + E + + I Sbjct: 65 GGYVTSSLEIAGGRERKVYTLTPKGQEAFRVAVEAWKEVTGYILEAVKLE 114 >UniRef50_P94443 Negative transcription regulator padR n=5 Tax=Bacillus RepID=PADR_BACSU Length = 182 Score = 92.7 bits (229), Expect = 6e-18, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 5/141 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG 121 L+ IL +L + + GY++ + ++ IYP L L ++ IT R G Sbjct: 3 VLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQG 62 Query: 122 ----KKQIALTEQGAQWLEENREQVEMIEERIK-ARCVGAALRQNPQMKRALDNFKAVLD 176 KK LT+ G Q L + + + I E +K + A + A D FK L Sbjct: 63 TKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISCLSRQEASDLFKDQLQ 122 Query: 177 LRVNQSDISDAQIKKIIAVID 197 R + +K++A + Sbjct: 123 KRQAKLSDLQGSYEKLMASAE 143 >UniRef50_Q02B04 Transcriptional regulator, PadR family n=5 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02B04_SOLUE Length = 116 Score = 92.3 bits (228), Expect = 8e-18, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 5/113 (4%) Query: 52 GRRQRFFGHGELRLVILDIL-SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G R+ G L L++L L + HGY + + IE +++ + G +Y L LQEQ Sbjct: 4 GTRKSEVMQGTLDLMVLQTLDALGPLHGYGIARRIEQVSEDVLHLNEGTLYTALLRLQEQ 63 Query: 111 SLITIRE--EEGGK--KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALR 159 I E + K ++T +G + L E E I I + R Sbjct: 64 GWIDASWGASENNRKAKFYSITRKGRKQLASETENWERIAGVIARLLQLSTSR 116 >UniRef50_Q9RT15 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RT15_DEIRA Length = 107 Score = 92.3 bits (228), Expect = 8e-18, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 5/101 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L L++L IL R +G+ +I+ ++ T G + G +YP L L+ L+ + Sbjct: 5 LLRGNLDLILLSILERRPLYGFAIIQEAKDRTDGYFEFKEGSLYPALHRLEVDGLLAAQF 64 Query: 118 EEGG-----KKQIALTEQGAQWLEENREQVEMIEERIKARC 153 E G +K A+T+ G Q L + RE+ + + Sbjct: 65 GEAGRNGKPRKYYAITDLGRQRLAQKREEFQTFTGAVHRLA 105 >UniRef50_Q1IKX7 Transcriptional regulator, PadR family n=2 Tax=Acidobacteria RepID=Q1IKX7_ACIBL Length = 120 Score = 92.3 bits (228), Expect = 8e-18, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 5/112 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 R G L ++IL+ L R +HGY L++ I+ + G +YP L L + L+ Sbjct: 9 SRDLFPGALEMMILESLRRQPAHGYALVQHIQQRSNNLLQVEEGSLYPALQRLLKGKLVK 68 Query: 115 IRE----EEGGK-KQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 + + +T+ G + LE + + + I+ A N Sbjct: 69 AEWTVSSSTNRRVRVYEITKAGLRHLEREISSFDRMLDGIQMVLGPAKREAN 120 >UniRef50_Q03UK7 Transcriptional regulator, PadR family n=15 Tax=cellular organisms RepID=Q03UK7_LEUMM Length = 116 Score = 92.3 bits (228), Expect = 8e-18, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 4/106 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G +IL+ILS+ DS+GY++ K+I L+ Y + +Y L++ I Sbjct: 4 SKDLIRGHTDTIILNILSQGDSYGYQVSKSIRQLSSKQYELNEATLYTAFRRLEKVGDIR 63 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 + +K LT+QG + + +++ + ++ I G Sbjct: 64 SYWGDQTQGARRKYYTLTDQGQEHFKSAQQEWDFAKDIISHLISGR 109 >UniRef50_C4F9Z1 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F9Z1_9ACTN Length = 116 Score = 92.3 bits (228), Expect = 9e-18, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G + +IL LS+ DS+GYE++K+I + G Y +Y +L L+ Q + Sbjct: 8 SDLIRGNIDAIILKTLSKGDSYGYEILKSIGTASLGEYEMKEPSLYTSLKRLEGQKFVES 67 Query: 116 RE----EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 + +K LT+ GAQ L E E+ E + I + Q Sbjct: 68 FWGNETQGARRKYYRLTDAGAQELVEATERWERVRGIIDRLLIMDGSEQ 116 >UniRef50_A4WHQ6 Transcriptional regulator, PadR family n=5 Tax=Thermoproteaceae RepID=A4WHQ6_PYRAR Length = 159 Score = 92.3 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 6/150 (4%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G + ++L L GYEL+K + L+ G YTPSPG +YP L +L+ + LI RE Sbjct: 4 RRRGIFKGIVLYFLKSRPLSGYELLKELNRLSSGRYTPSPGTLYPLLSYLEAEGLIESRE 63 Query: 118 ---EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 KK ALT QG ++L E E E +K G A M D + Sbjct: 64 AYVGRRRKKIYALTPQGEEYLARLMED-EEFLELLKTLESGRAGGD--LMTAIRDELAYI 120 Query: 175 LDLRVNQSDISDAQIKKIIAVIDRAAFDIT 204 ++ + +++++ ++ R + Sbjct: 121 DEVFDEVENGDVEVLREMLDLLRRLEEKVE 150 >UniRef50_A8LAZ7 Transcriptional regulator, PadR-like family n=9 Tax=Actinomycetales RepID=A8LAZ7_FRASN Length = 325 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 9/164 (5%) Query: 43 CGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP 102 G G G GR R G++R +L +L+ + HGY++I + + + G + PSPG +YP Sbjct: 121 RGFPPGPGFGRGARV-ARGDVREALLALLAEEPMHGYQMIGELASRSGGVWRPSPGSVYP 179 Query: 103 TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 L L ++ L+ E + G++ LT+ G +E + E + A Sbjct: 180 VLSLLADEGLVRAEERD-GRRVFHLTDAGRAHVEARAGTAKPWETAAAS----ADDETTA 234 Query: 163 QMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQL 206 A AV+ + QI ++ + ++ Sbjct: 235 LRTLAFGVGAAVVQVAQAG---DADQIAAARDLLTETRRGLYRI 275 >UniRef50_UPI000185C042 transcriptional regulator, PadR family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C042 Length = 111 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 6/109 (5%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 R Q G L L IL ++SR++ +G L+ + + + G +YP L L Sbjct: 3 KRPQTQLKKGVLELAILKLISREELYGAALVAKLNA--YPHLSAPAGTVYPLLSRLTTNG 60 Query: 112 LITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 LI+ R EE +K +LT++G Q L + + + + A Sbjct: 61 LISNRWEESPKGPPRKYYSLTDKGKQTLTQLHQDFIDLSADMTALFSEE 109 >UniRef50_B7HT59 Transcriptional regulator, PadR family n=5 Tax=Firmicutes RepID=B7HT59_BACC7 Length = 109 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 6/110 (5%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 ++ G L IL I+ + +GYEL + + N G ++ S G IYP L +Q++ Sbjct: 1 MKKSTQMLKGVLDGCILSIIQEGEIYGYELKEKLHN--YGFHSFSEGTIYPLLLRMQKEG 58 Query: 112 LITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 L+T E +K AL++ G + L++ +E+ + ++ ++ Sbjct: 59 LVTSVLRESTTGPKRKYYALSKMGEKELDKFKERWDDLKLFVENVINKEG 108 >UniRef50_C6W103 Transcriptional regulator, PadR-like family n=24 Tax=Bacteroidetes RepID=C6W103_DYAFD Length = 124 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 42/105 (40%), Gaps = 7/105 (6%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L IL I+SR + + ++ ++ LT + G +YP L L+ + + Sbjct: 9 QMRKGILEFCILHIISRGEVYASDM---LDELTSAHIMVVEGTLYPLLTRLKNSGWLDYK 65 Query: 117 EEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 E +K LT++G +L+ + + + ++ Sbjct: 66 WVESSSGPPRKYYVLTDEGKVFLDAMQATWFELADSVQTVIKRTE 110 >UniRef50_C2G3G3 PadR family transcriptional regulator n=2 Tax=Sphingobacterium spiritivorum RepID=C2G3G3_9SPHI Length = 110 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 53 RRQRFFGHGELRLVILDILS-RDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 + G L ++L IL + +GY+LI I+ T + G +YP ++ L+++ Sbjct: 8 KWISQLKKGTLSFLVLSILKDEKEYYGYDLINEIKKKTS--IEIAEGTLYPLMNRLKKEE 65 Query: 112 LITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIK 150 L+ + E +K +T+ G E + + + I Sbjct: 66 LVESKWVEQESGIPRKYYKITKLGLSTASEMKIYWDNLNTTIN 108 >UniRef50_C5RE17 Transcriptional regulator, PadR-like family n=2 Tax=Clostridium RepID=C5RE17_CLOCL Length = 117 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 50/109 (45%), Gaps = 6/109 (5%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G + ++L +L +D +GYE+ K I+ ++ + +Y +L L+++ + + Sbjct: 9 KGYIDTIVLSVLQNEDMYGYEIAKRIKEKSRNGFVIKEATLYVSLKRLEKKEYLKGYWND 68 Query: 120 ------GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNP 162 G ++ ++TE G + EE ++ +++ E + ++ Sbjct: 69 SEGTSGGRRRYYSITESGRSFFEERVDEWKILRELLSNFMEVVHSGEDR 117 >UniRef50_A3DMJ9 Transcriptional regulator, PadR family n=1 Tax=Staphylothermus marinus F1 RepID=A3DMJ9_STAMF Length = 130 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 5/100 (5%) Query: 56 RFFGHGELRLVILDILSR-DDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G ++IL +L + +GY++ I+ L+ PS IY TL + + LI Sbjct: 11 KSLRTGFYTVIILGLLKKHGPLYGYKIKSLIKQLSNNTLNPSESTIYETLKNMDKNKLIK 70 Query: 115 IREEEGG----KKQIALTEQGAQWLEENREQVEMIEERIK 150 E +K +T++G + LE R ++E I E I Sbjct: 71 SYWTESNLGPPRKYYEITDKGLKTLETLRVELEKIIETIN 110 >UniRef50_D2B3D4 Transcriptional regulator, PadR-like family n=1 Tax=Streptosporangium roseum DSM 43021 RepID=D2B3D4_STRRD Length = 125 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 6/124 (4%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 R+ + G L L++L L+ +++GYE+ K + G G +YP L+ L+E L Sbjct: 4 DRRASWLKGVLDLLVLASLTAGENYGYEIAKDLAESGLGQIKG--GTLYPVLNRLEEAGL 61 Query: 113 ITIR----EEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRAL 168 +T E G++ LT+ G Q L E EE ++A + Sbjct: 62 VTAEFRATERGPGRRYYRLTDLGRQTLAEQGGLWLGFEESVRAVLARGHVETPQPAGSHE 121 Query: 169 DNFK 172 + Sbjct: 122 GKLR 125 >UniRef50_A3DFJ2 Transcriptional regulator, PadR family n=2 Tax=Clostridium thermocellum RepID=A3DFJ2_CLOTH Length = 204 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 26/147 (17%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT----IREE 118 L+ IL +L+ D GYE++K + +T + IY L+ L++ +T + Sbjct: 26 LKHGILGLLNYGDMTGYEIMKVFRDSLSFFWTANTSQIYRELNTLKKDGFVTDIVVKQTG 85 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 + KK ++TE G + L+ + + R +P + + Sbjct: 86 KPDKKVFSITESGREELKRWLREYD------------YGNRNSPLC----------MKVF 123 Query: 179 VNQSDISDAQIKKIIAVIDRAAFDITQ 205 + + I+++ + + A I + Sbjct: 124 FSGELPKEENIERLREIKNEAQQAIER 150 >UniRef50_B6GB42 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B6GB42_9ACTN Length = 116 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%) Query: 56 RFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI 115 G + +IL LS D++GYE++K I ++G Y +Y +L L+ Q + Sbjct: 8 SDLIRGNIDAIILCSLSEGDNYGYEILKGIALASRGEYEMKEPSLYTSLKRLESQGFVES 67 Query: 116 RE----EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 + +K +T G Q L E E+ + + I + Sbjct: 68 YWGSETQGARRKYYRITSAGVQELSEATERWIRVRKIIDRLLNQEGSAR 116 >UniRef50_A3TQ81 Transcriptional regulator, PadR family protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TQ81_9MICO Length = 114 Score = 91.9 bits (227), Expect = 1e-17, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 7/115 (6%) Query: 46 RHGRGGGRRQRFFGHGELRLVILDILSRDDS-HGYELIKAIENLTQGNYTPSPGVIYPTL 104 + RQ + G L L +L LSR+ S +GY L+ ++ + G G IYP L Sbjct: 2 GKAKVREDRQSQWLKGVLDLAVLAALSRETSAYGYTLMASLAD--FGFEGIKGGTIYPLL 59 Query: 105 DFLQEQSLITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 L+E L+ G +K LT G L R+ + + G Sbjct: 60 SRLEEDGLVKSEWVTGQSGPPRKYFWLTGAGRAELASGRDGWLSFSKTMTKALEG 114 >UniRef50_C1RLU7 Transcriptional regulator, PadR family n=2 Tax=Micrococcineae RepID=C1RLU7_9CELL Length = 114 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 6/107 (5%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + G L +L L+ ++G ++ +A+ S G +YP L L+ + Sbjct: 7 DVRTQLRRGTLEFCVLAHLAASPAYGQDIARALGA--DHVLFASEGTLYPLLTRLRSRGW 64 Query: 113 ITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 + +E ++ LT+ G L+ E + G Sbjct: 65 VDTSWQESPTGPPRRYHRLTDSGRAALDAFVEVWRPYRSAVDHLLEG 111 >UniRef50_A3DGR1 Transcriptional regulator, PadR family n=40 Tax=Firmicutes RepID=A3DGR1_CLOTH Length = 114 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEE 119 G + +IL +L DS+GYE+ K I T Y +Y L++ I E Sbjct: 8 RGYVDTIILSLLIEGDSYGYEISKNIRIKTDELYVIKETTLYSAFARLEKNGYIKSYYGE 67 Query: 120 ----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN 161 + +T +G ++ ++ E+ E+ ++ I + Sbjct: 68 ETQGKRRTYYRITPEGIKYYKQKCEEWELTKKVINKFVKELESNGD 113 >UniRef50_B2IKL6 Transcriptional regulator, PadR-like family n=2 Tax=Alphaproteobacteria RepID=B2IKL6_BEII9 Length = 209 Score = 91.6 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 26/203 (12%) Query: 26 SEHEHCGHGHQHEHG-QCCGGRHGRGGG--------------RRQRFFGHGELRLVILDI 70 EH H H H G HG G G R EL+LV+L + Sbjct: 3 KEHIHAHKFHHFLHSIGRRRGPHGFGRGWAEGFGRGFGGGDFSAGRKLSSNELQLVLLAL 62 Query: 71 LSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQ 130 L+ +HGYELI+ +E + G Y PSPG++YP L +L+E ++ +EG +K +LTE+ Sbjct: 63 LAERPAHGYELIRMLEERSGGFYAPSPGMVYPALTYLEEIGHASVT-QEGNRKLYSLTEE 121 Query: 131 GAQWLEENREQVEMIEERIKARCVGAALRQ---------NPQMKRALDNFKAVLDLRVNQ 181 G Q L+ +RE+ + I E + A + +PQ L + + + + Sbjct: 122 GRQSLQAHREEADFILETLARIGSRMAEVREAFAGVDAADPQAADELHQARHAIKHALMR 181 Query: 182 SD-ISDAQIKKIIAVIDRAAFDI 203 S A+ ++I ++ RA +I Sbjct: 182 KRGCSPAEARRIAGILQRATAEI 204 >UniRef50_B8FZV5 Transcriptional regulator, PadR-like family n=6 Tax=Bacteria RepID=B8FZV5_DESHD Length = 123 Score = 91.6 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 G VIL++L + DS+GY + K I L+ Y +Y ++++ I Sbjct: 6 STDLIRGHTDTVILNVLRQGDSYGYGIYKTIIELSGHQYELKEATLYTAFRRMEQEGCIV 65 Query: 115 IREEE----GGKKQIALTEQGAQWLEENREQV 142 + G +K +T++G + E+N + Sbjct: 66 SYWGDETSGGRRKYYRITDKGLETYEKNIKDW 97 >UniRef50_Q9RSP5 Putative uncharacterized protein n=1 Tax=Deinococcus radiodurans RepID=Q9RSP5_DEIRA Length = 134 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 5/109 (4%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 G G L ++L L +G +I+ +++ T G++ G +YP L L+++ Sbjct: 21 GKDLDGNLLRGTLDFLLLASLEDGPLYGLRIIQDVQDRTDGHFRFKEGTLYPALHRLEKR 80 Query: 111 SLITIREEEGG-----KKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 I + +K LTE G L REQ + Sbjct: 81 GWIVGEQRPSDAGGPPRKYYELTEGGKTELARQREQQRAHARALAPYLQ 129 >UniRef50_A6WBU7 Transcriptional regulator, PadR-like family n=2 Tax=Actinomycetales RepID=A6WBU7_KINRD Length = 121 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 6/106 (5%) Query: 52 GRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQS 111 G R + G L L +L+ ++HGY + + ++ G G +YP L+ L++ Sbjct: 3 GVRSGEWQRGVLATCALAVLADGETHGYAIAQRLQAAGIGAVRG--GALYPVLNKLEQDG 60 Query: 112 LITIREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 L+T +EG G+K LT G + ++ R+ + Sbjct: 61 LLTSTWQEGTAGPGRKVFRLTASGRERTQQVRDGWPAFAAAVAGVL 106 >UniRef50_D0WM05 Transcriptional regulator, PadR family n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WM05_9ACTO Length = 145 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 4/102 (3%) Query: 60 HGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI---- 115 G + L++L IL S+ YEL+K I ++ G Y +Y + L+ L+ Sbjct: 44 RGYIDLMVLSILREHASYPYELVKTITEISGGAYAIKQTTLYSAVKRLEATGLVASFPDV 103 Query: 116 REEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 E + +T++G L + + + G+ Sbjct: 104 SESGKPRTYYRMTDEGRASLRSKIAEWKATRAVVDRFVKGSH 145 >UniRef50_B8F979 Transcriptional regulator, PadR-like family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8F979_DESAA Length = 177 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 7/132 (5%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITI----RE 117 +++ +IL L D GY++ + + S G IYP L ++ LIT +E Sbjct: 2 DIQTMILGFLMNQDMTGYDIRQKFDMSFGFFSGLSYGSIYPALKKMEAAGLITTQLMIQE 61 Query: 118 EEGGKKQIALTEQGAQWLEENREQ---VEMIEERIKARCVGAALRQNPQMKRALDNFKAV 174 KK A+T++G + E ++ + AR A + + + N+ Sbjct: 62 GAPNKKLCAVTDKGREAFHEAMRAPLGLDKYKNSFMARLFFFAHLEPYERRELAVNYMNS 121 Query: 175 LDLRVNQSDISD 186 LD + + Sbjct: 122 LDKMFEKLREYE 133 >UniRef50_P39044 Uncharacterized protein X n=4 Tax=Bacillaceae RepID=YX_BACSH Length = 109 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL 112 + G L +IL ++ D +GYE+ + I N T ++ +Y L+++ + Sbjct: 1 MVRSDIIRGHLDSIILRLILEKDRYGYEISQEISNRTNNSFQIKEATLYAVFQRLEKKEV 60 Query: 113 ITIREEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAA 157 I + G +K +T G +L E ++ ++E I G Sbjct: 61 IEAYYGDVSDGGKRKYYRITSLGKAYLSELVKEWAEVKEIIDLFMEGLE 109 >UniRef50_B3ZXV3 Transcriptional regulator, PadR family n=2 Tax=Bacillus cereus RepID=B3ZXV3_BACCE Length = 110 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 50/106 (47%), Gaps = 4/106 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G + +IL +L ++ +GY L ++I N T+ + +Y L L+ + ++ Sbjct: 4 GKELLKGNIDSIILSLLIKEPMYGYMLSQSISNKTKRKFEIKESTLYLALKRLETKRYVS 63 Query: 115 IREEEG----GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E+ +K ++++G ++ +E + + + +++ + G Sbjct: 64 SWWEKAPNGVKRKYYKISKEGIEFYKEKKVEWKELKQFLDTFLEGG 109 >UniRef50_Q1IHM4 Transcriptional regulator, PadR family n=5 Tax=Bacteria RepID=Q1IHM4_ACIBL Length = 114 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 4/103 (3%) Query: 58 FGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE 117 G L ++IL +S HGY ++ I+ ++ G +YP L L+ Q I Sbjct: 8 LLQGTLDMLILKAVSLGPLHGYGVLLRIQQISGQQLEIQQGSLYPALYRLEHQGAIASEW 67 Query: 118 EE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E K LT G L + + I A Sbjct: 68 GESENNRRAKYYELTTSGRAMLRSETAKWNRMSAIIGGILQAA 110 >UniRef50_C1QEA4 Transcriptional regulator, PadR family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QEA4_9SPIR Length = 109 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G + V+L L +DS+GYEL K I + T G Y + +Y + L+ + LI Sbjct: 4 ESDIIRGHIDAVVLHFLKDNDSYGYELSKLITDKTNGEYEINGQTLYSAIRRLEGKKLIE 63 Query: 115 IRE----EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCV 154 + G +K +TE+G +L+E E ++ I Sbjct: 64 SYWGNESQGGRRKYYKITEEGKSFLKEETEIWIFTKKIIDKLLD 107 >UniRef50_B7K746 Transcriptional regulator, PadR-like family n=3 Tax=Cyanobacteria RepID=B7K746_CYAP7 Length = 191 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 10/132 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG- 121 L L L +L R+ HGY L + +E L G + + G IYP L L+E+ + + EE G Sbjct: 2 LELATLGLLQREPLHGYRLKQQLELLMSGCISVNYGAIYPLLKRLEEKGFLEVCLEEDGH 61 Query: 122 ----KKQIALTEQGAQWLEENR-----EQVEMIEERIKARCVGAALRQNPQMKRALDNFK 172 +K +TE G + ++ E R + + ++ + + L++ Sbjct: 62 GGNTRKIYQITETGRERWKKKMMEHPHESWVHARSRFMIKFFFFSYIESQERIKLLEHRL 121 Query: 173 AVLDLRVNQSDI 184 V LR+ DI Sbjct: 122 KVCQLRLENQDI 133 >UniRef50_B4RB07 Predicted transcriptional regulator n=8 Tax=Bacteria RepID=B4RB07_PHEZH Length = 108 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 8/104 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L L +L +L + DS+ YE+ + + G IYP + LQ L+ Sbjct: 8 QLKKGALELCVLALLHQHDSYAYEIASRLSDTIG----MGEGTIYPLMRRLQSDGLVETY 63 Query: 117 EEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 E +K LTE G + + + + GA Sbjct: 64 LIESSSGPPRKYYRLTEAGKRSFASQQAAWKSFSGAVDDILGGA 107 >UniRef50_D1Y9J2 Transcriptional regulator, PadR family n=2 Tax=Propionibacterium acnes RepID=D1Y9J2_PROAC Length = 191 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 50/135 (37%), Gaps = 5/135 (3%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI-TIREEEG 120 ++ IL +L+ HGYE+ + T + + G +Y TLD L+ L E Sbjct: 2 SIKFAILALLAEKPRHGYEIKNEFDRRTNHTWPLNIGQVYTTLDRLERDGLCYRGEETPD 61 Query: 121 GKKQIALTEQGAQWLEEN----REQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLD 176 G+ ++ +G + + + + AA ++ + + + + Sbjct: 62 GRVIATISPKGREEVRRWFTTPIAPANPPRNELAIKIALAATSKDVDVATLIQDQRHATM 121 Query: 177 LRVNQSDISDAQIKK 191 ++ + + + + Sbjct: 122 HQLQECRQARRSVAE 136 >UniRef50_C0ZHM5 Putative transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZHM5_BREBN Length = 177 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 4/144 (2%) Query: 62 ELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE---- 117 +++ +IL LS + GY++ +A N Y S G IYP L L+E+ +T +E Sbjct: 2 DVKTIILGFLSYGEMSGYDIKQAFTNSIGFFYDASFGAIYPALRKLEEEGFVTKQEIIQS 61 Query: 118 EEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDL 177 + K +TE G Q + + + V + + D + LD Sbjct: 62 GKPNKILYRITEAGKQSFRQEIQTPILPPVLRSDMLVKIFFGKGRTIDEQKDLLEGCLDT 121 Query: 178 RVNQSDISDAQIKKIIAVIDRAAF 201 + S A KK+ D Sbjct: 122 QRQLLQQSKASYKKLEVNFDEYQR 145 >UniRef50_A8SUL2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUL2_9FIRM Length = 142 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 4/116 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + F G + L++L +LS+ D +GY+L + IE LT G G +YP L L + I+ Sbjct: 25 KSNFRRGSVELMVLYLLSQKDCYGYQLTQLIEELTDGVICIPIGSLYPALYKLIDAGYIS 84 Query: 115 IREEEGGKK----QIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKR 166 + GK+ + + G + L+ E I+ + ++ Sbjct: 85 DDKRLVGKRMERVYYHIEDTGRERLKILLEDYSATTIAIQTVLAYHPTKGKEGKRK 140 >UniRef50_Q01ZV7 Transcriptional regulator, PadR family n=4 Tax=Acidobacteria RepID=Q01ZV7_SOLUE Length = 116 Score = 90.8 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLIT 114 + G L L+IL I + HGY + + ++ +++ G +YP L L+ + L+ Sbjct: 8 KSELPQGTLDLLILKIAALGPVHGYGVAQRLQQVSRDVVKVPQGSLYPALHRLENRGLLA 67 Query: 115 IRE--EEGGK--KQIALTEQGAQWLEENREQVEMIEERIKARCV 154 E G+ K LT +G LE E + E + Sbjct: 68 AEWKQTETGREAKFYRLTRKGRGQLETETASWERLAEAVGLILR 111 >UniRef50_D1ACF2 Transcriptional regulator, PadR-like family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACF2_THECD Length = 238 Score = 90.8 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQG 131 HGYE+I+ +++ G Y+PSPG IYP L L+ L+T E GKK +LT+ G Sbjct: 19 EESPRHGYEVIRLLQDRFLGVYSPSPGTIYPRLARLEADGLVT-HEVIKGKKVYSLTDAG 77 Query: 132 AQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKK 191 LE +++ +EE I A A +++ + + + L + K Sbjct: 78 RAELERRMDELADLEEEIAASAQQFARELQQDVRQTVRSLREELTQAAREMRKQGRTASK 137 >UniRef50_A5FNI2 Transcriptional regulator, PadR family n=8 Tax=Bacteroidetes RepID=A5FNI2_FLAJ1 Length = 110 Score = 90.8 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 7/98 (7%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L IL +L D++ E++ ++ G +YP L L+ L+ R Sbjct: 9 QMRKGVLEFCILSVLKEKDAYTSEILDTLK---NAKLLVVEGTVYPLLTRLKNDGLLNYR 65 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIK 150 EE +K LTE G +L E + + + Sbjct: 66 WEESTSGPPRKYYGLTEIGQTFLNELSGTWTELSDAVN 103 >UniRef50_B0P308 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P308_9CLOT Length = 115 Score = 90.8 bits (224), Expect = 3e-17, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 4/95 (4%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREE---- 118 L +++L LS+ D +GY+L + + + G P +YP L L +Q I+ EE Sbjct: 18 LDMLVLSTLSKHDCYGYQLTQIFDECSNGIIKPKVSSLYPILYRLIDQGYISSYEEIIKN 77 Query: 119 EGGKKQIALTEQGAQWLEENREQVEMIEERIKARC 153 + L +G + L++ + + I++ Sbjct: 78 NRRRVYYHLEPKGFELLQQLIDDYQKYTASIQSIL 112 >UniRef50_A8SIW9 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIW9_9FIRM Length = 103 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 7/96 (7%) Query: 63 LRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIRE---EE 119 L +L I++R D++GYE+ + + S +YP L L + L+ + + Sbjct: 9 LDFCVLAIVNRSDTYGYEITQKL----MATIEISESTLYPVLRRLLKNGLLDSYDVAFDG 64 Query: 120 GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVG 155 ++ +T G L N+E+ + +++ G Sbjct: 65 RNRRYYRITGAGRDVLNFNKEKWNIYVKQVNQIVGG 100 >UniRef50_Q7NDS5 Glr4157 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDS5_GLOVI Length = 182 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 5/125 (4%) Query: 64 RLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSL----ITIREEE 119 + IL +LS GY++ K I ++ S G IYP L L ++ L + +E + Sbjct: 8 KYAILGLLSLQPMSGYDIRKKIAASIGHFWSESYGQIYPILRQLVQEGLATRTVERQEGK 67 Query: 120 GGKKQIALTEQGAQWLEENREQ-VEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLR 178 + ALT+ G + L ++ VE ER + RQ + R Sbjct: 68 PDRYVYALTDGGREQLVGWLQEPVESATERNELLLKLFFGRQMTPADCLAHLRRFHRHQR 127 Query: 179 VNQSD 183 + Sbjct: 128 QQHGE 132 >UniRef50_UPI0001C31834 transcriptional regulator, PadR-like family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31834 Length = 117 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 42/106 (39%), Gaps = 6/106 (5%) Query: 57 FFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIR 116 G L+ +L +L + + +++++++ + S G IYP L ++ + ++ Sbjct: 14 QLRRGTLQFCVLALLGNEPRYAFDVVRSLGEVDGMV--TSEGTIYPLLSRMRREGMVAST 71 Query: 117 EEE----GGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 +E ++ LT+ G L + + + G A Sbjct: 72 WQESPSGPPRRYYELTDHGRASLHRFATEWRTFRDAVDQLIPGGAA 117 >UniRef50_B9Y2R1 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2R1_9FIRM Length = 112 Score = 90.4 bits (223), Expect = 3e-17, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 3/91 (3%) Query: 72 SRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGG---KKQIALT 128 + +GYELIK +++ + + G +YP L ++ + I + ++ A+T Sbjct: 21 KEQERYGYELIKTLKDRSNDAFDFKEGTLYPILHKMENEGWIRSENKTVNGRTRRYYAIT 80 Query: 129 EQGAQWLEENREQVEMIEERIKARCVGAALR 159 +G + LE +EQ + Sbjct: 81 ARGVKQLEVQQEQWSHFSSAVNQVLSFQGSG 111 >UniRef50_Q9YC94 Putative transcriptional regulator, PadR family n=1 Tax=Aeropyrum pernix RepID=Q9YC94_AERPE Length = 173 Score = 90.4 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 18/145 (12%) Query: 51 GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQ 110 + LR ++L +L+ HGYE++ IE +T G + P+PG +YP LD L+ + Sbjct: 8 QEGSRSNIIRESLRQLVLRVLAERPYHGYEIMNRIEEITNGVWRPAPGTLYPLLDQLKRE 67 Query: 111 SLITIREEE------GGKKQIALTEQGAQWLE----ENREQVEMIEERI--------KAR 152 LI + + G + ALTE G + L E +V+ + I + Sbjct: 68 GLIRVERMDRKGVKGGRRIVYALTEDGWRRLADIMFEKARKVDYLIYYIIEGCRILRENG 127 Query: 153 CVGAALRQNPQMKRALDNFKAVLDL 177 G A R + ++A++ F+ L+ Sbjct: 128 FEGEAARVCAEARKAVEKFEEALEQ 152 >UniRef50_C6VSB4 Transcriptional regulator, PadR-like family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VSB4_DYAFD Length = 117 Score = 90.4 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 4/106 (3%) Query: 57 FFGHGELRLVILDILSRDD-SHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI-- 113 + G L+ ++L++L+ D +GYE+ + +++ T G + G +YP L L+++ L+ Sbjct: 9 EYVRGTLKTIVLNLLAEHDRMYGYEITQEVKDRTGGAIALTFGALYPVLHKLEQEGLLLT 68 Query: 114 TIREEEGG-KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAAL 158 E +G +K +LT +G + +E E ++ L Sbjct: 69 ESVEVDGRLRKYYSLTHRGNETARTKTNDLERFIEAVRLLLAPKNL 114 >UniRef50_B2A0I7 Transcriptional regulator, PadR-like family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0I7_NATTJ Length = 121 Score = 90.4 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 3/110 (2%) Query: 54 RQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI 113 + ++ ++L L + SHGY ++ ++ TQG TP+ G +YP L L E+ Sbjct: 9 WKSLINMAVIKFLVLRTLKTNPSHGYGILNQVKEFTQGCCTPTYGSVYPILKELCEEGYA 68 Query: 114 TIREEEGG---KKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ 160 ++ E +K LTEQG Q + +E + I + Sbjct: 69 EVKFETVNNRERKVYYLTEQGEQAYLQAKEAWQDILPFLNKVMSEEVDGD 118 >UniRef50_C7REA3 Transcriptional regulator, PadR-like family n=5 Tax=Anaerococcus RepID=C7REA3_ANAPD Length = 108 Score = 90.0 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Query: 55 QRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLI- 113 + G + VIL I+ ++++GYE+++ ++N G Y + G +YP L L ++ I Sbjct: 3 ESQMLKGVIEGVILHIIKNNETYGYEIVEELKN--SGFYAMTEGTVYPILQRLSKKGYIF 60 Query: 114 ---TIREEEGGKKQIALTEQGAQWLEENREQVEMIE 146 +K ++ +G +L+ + + + Sbjct: 61 GAYKKSTIGPKRKYYYISPKGRDYLDSFYKSFDELS 96 >UniRef50_A7VYN2 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYN2_9CLOT Length = 113 Score = 90.0 bits (222), Expect = 4e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Query: 53 RRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYT-PSPGVIYPTLDFLQEQS 111 + ++ F G L +V+L +++R S+GYELI ++ G + G +YP L L+++ Sbjct: 4 KLEQQFKKGALEMVLLSLIARQRSYGYELISRLQREGGGLFQETKEGTLYPILYRLEDEG 63 Query: 112 LITIREEEGG----KKQIALTEQGAQWLEENREQVEMIEERIKARCVGA 156 LI KK +T+ G L E + + ++ I A Sbjct: 64 LIESELASDSGRRVKKYYQITDLGLSALTERKSFWQSYKKVIDRLLEDA 112 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.145 0.398 Lambda K H 0.267 0.0436 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,221,445,963 Number of Sequences: 3077464 Number of extensions: 56879613 Number of successful extensions: 424694 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1585 Number of HSP's successfully gapped in prelim test: 1640 Number of HSP's that attempted gapping in prelim test: 405483 Number of HSP's gapped (non-prelim): 13486 length of query: 207 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 84 effective length of database: 661,868,284 effective search space: 55596935856 effective search space used: 55596935856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 90 (39.2 bits)