Phyre 2 alignment of P0AAW9 with c1afoB_

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Job Description | P0AAW9
Confidence | 6.36% | Date | Wed Jan 25 15:20:21 GMT 2012
Rank | 5 | Aligned Residues | 22
% Identity | 27% | Template | c1afoB_
PDB info | PDB header:integral membrane protein | Chain: B: PDB Molecule:glycophorin a; | PDBTitle: dimeric transmembrane domain of human glycophorin a, nmr,2 20 structures
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | P | V | V | M | A | I | I | L | G | L | I | Y | G | L | G | E | V | F | N | I | F | S
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Template Sequence |  | P | E | I | T | L | I | I | F | G | V | M | A | G | V | I | G | T | I | L | L | I | S
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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