Phyre 2 alignment of P0AAW9 with c3dinD_

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Job Description | P0AAW9
Confidence | 19.57% | Date | Wed Jan 25 15:20:21 GMT 2012
Rank | 2 | Aligned Residues | 34
% Identity | 21% | Template | c3dinD_
PDB info | PDB header:membrane protein, protein transport | Chain: D: PDB Molecule:preprotein translocase subunit sece; | PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase
Resolution | 4.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | E | L | L | K | S | L | V | F | A | V | I | M | V | P | V | V | M | A | I | I | L | G | L | I | Y | G | L | G | E | V | F | N | I | F
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | L | L | T | S | F | G | V | V | L | V | I | L | A | V | T | S | V | Y | F | F | V | L | D | F | I | F | S | G | V | V | S | A | I
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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