BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (120 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P45551 Uncharacterized protein yhfY n=52 Tax=Enterobact... 244 5e-64 UniRef50_Q7N5F7 Similar to unknown protein YhfY of Escherichia c... 127 1e-28 UniRef50_A1JKN9 Putative uncharacterized protein n=5 Tax=Yersini... 124 7e-28 UniRef50_A8GJ09 PRD domain protein n=3 Tax=Enterobacteriaceae Re... 102 5e-21 UniRef50_C4U196 PRD domain protein n=2 Tax=Yersinia RepID=C4U196... 97 2e-19 UniRef50_C6AQX2 S-ribosylhomocysteinase n=4 Tax=Pasteurellaceae ... 63 3e-09 UniRef50_Q0I1W6 Putative uncharacterized protein n=3 Tax=Pasteur... 59 4e-08 UniRef50_B9Y6L8 Putative uncharacterized protein n=1 Tax=Holdema... 58 1e-07 UniRef50_B9CM75 Putative uncharacterized protein n=1 Tax=Atopobi... 55 5e-07 UniRef50_A6D1D8 Putative uncharacterized protein n=1 Tax=Vibrio ... 55 8e-07 UniRef50_UPI0001794F42 hypothetical protein CLOSPO_02901 n=1 Tax... 54 1e-06 UniRef50_D0GNT1 PRD domain-containing protein n=1 Tax=Leptotrich... 54 2e-06 UniRef50_C3WF22 Predicted protein n=1 Tax=Fusobacterium mortifer... 52 4e-06 UniRef50_Q6LNG7 Putative uncharacterized protein PM1058 n=1 Tax=... 52 7e-06 UniRef50_D1ALX8 PRD domain protein n=1 Tax=Sebaldella termitidis... 52 8e-06 UniRef50_Q67S02 Putative transcriptional antiterminator n=1 Tax=... 47 1e-04 UniRef50_UPI0001C35378 PRD domain-containing protein n=1 Tax=Clo... 47 3e-04 UniRef50_P44003 Uncharacterized protein HI0487 n=15 Tax=Haemophi... 42 0.004 UniRef50_C1I3F9 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 40 0.016 UniRef50_B0K1N4 PRD domain protein n=3 Tax=Thermoanaerobacter Re... 40 0.017 UniRef50_C9A355 Putative uncharacterized protein n=1 Tax=Enteroc... 38 0.077 >UniRef50_P45551 Uncharacterized protein yhfY n=52 Tax=Enterobacteriaceae RepID=YHFY_ECOLI Length = 120 Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 120/120 (100%), Positives = 120/120 (100%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE Sbjct: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV Sbjct: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 >UniRef50_Q7N5F7 Similar to unknown protein YhfY of Escherichia coli n=2 Tax=Enterobacteriaceae RepID=Q7N5F7_PHOLL Length = 118 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 6/121 (4%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ME RLNLL + VID+DI GM+QVV LE + +PVR+ G + +THMA+ALMRSRRGE Sbjct: 1 MENRLNLLYQGNVIDQDIHDGMLQVVAQLENDWEIPVRNALGEIVITHMANALMRSRRGE 60 Query: 61 EIEPLDNELLAELAQS---SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 +I +DNELL E+ QS SH QA+ + LL F ++++PCEEGYLLANL+ LW A Sbjct: 61 QISSMDNELLMEVRQSRIFSHLQAI---NASLLAHFDVQLHPCEEGYLLANLFSLWAAKG 117 Query: 118 E 118 + Sbjct: 118 Q 118 >UniRef50_A1JKN9 Putative uncharacterized protein n=5 Tax=Yersinia RepID=A1JKN9_YERE8 Length = 126 Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 61/117 (52%), Positives = 87/117 (74%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RLN+LC++GVID+DI +G+ QV+N LE LPV EQG MA+THMA+ALMR+RRGE Sbjct: 5 IDARLNILCQSGVIDQDIGQGLDQVINRLEHFWQLPVHGEQGVMAITHMANALMRTRRGE 64 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 EI L+ +LAE+ QS + +++Q LL F+L+ E GYLLANLYGL+++++ Sbjct: 65 EIAALNPAILAEIVQSKEIHYIREINQDLLAYFSLKPAENEIGYLLANLYGLYLSSD 121 >UniRef50_A8GJ09 PRD domain protein n=3 Tax=Enterobacteriaceae RepID=A8GJ09_SERP5 Length = 122 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/118 (44%), Positives = 77/118 (65%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRL +L +A VID ++ GM++VV LE L +R QG M +THMA+AL R+RRGE Sbjct: 1 METRLQILHDAQVIDTEVYIGMLEVVKRLEQHWQLNIRHTQGEMMITHMANALTRARRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 I +D ELL E+ S+ + + +++ LL FA + E GYLLAN++GL++A + Sbjct: 61 IIAAIDPELLDEIEASNVFANIREINSDLLSLFAFAIPDSELGYLLANVFGLYLAQTD 118 >UniRef50_C4U196 PRD domain protein n=2 Tax=Yersinia RepID=C4U196_YERKR Length = 152 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 52/119 (43%), Positives = 75/119 (63%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRL +L +A VID + GM+ V+ LE L +R QG M +THMA+ALMR+ +G+ Sbjct: 32 METRLKILYDAQVIDSAVYFGMLNVLTRLEHHWQLSIRHPQGEMLITHMANALMRASQGQ 91 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 I +D+E+L E+ ++ + + +++ LL F EV E GYLLANLYGL +A E Sbjct: 92 VIPAIDDEILKEIEATAIFANIREINNDLLSLFVFEVPNHELGYLLANLYGLHLAQQTE 150 >UniRef50_C6AQX2 S-ribosylhomocysteinase n=4 Tax=Pasteurellaceae RepID=C6AQX2_AGGAN Length = 126 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/100 (35%), Positives = 56/100 (56%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +ID+ I ++ V L+ + V +EQ M + H+ASAL R +RG PL + LAE Sbjct: 15 LIDEHIVDTVLNVRQHLQRHWQVDVETEQVKMMLVHIASALGRIKRGHRASPLYADFLAE 74 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + + V+ +HQ +L+ L + E+ Y LAN+YGL Sbjct: 75 IQSAVIFPQVLIIHQYVLELMPLSIPEEEQTYFLANVYGL 114 >UniRef50_Q0I1W6 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=Q0I1W6_HAES1 Length = 146 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 64/115 (55%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL L + +ID+DI + + N L + + ++++Q M + H+A AL R +RG Sbjct: 25 IQQRLIFLVQRHLIDEDIMTITLNIRNRLGKKWRVNLKTKQVDMLLIHLAMALGRIKRGY 84 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 + L+ + +E+ ++ + +++LHQ LL + E+ + +AN+Y L +A Sbjct: 85 VAKALNPDFFSEIERAVCFTKILKLHQELLTFIPFPIPKEEQSHFIANIYSLSLA 139 >UniRef50_B9Y6L8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6L8_9FIRM Length = 124 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 56/109 (51%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 RLNL E G+I D + ++ + + + H+ ++ E + H+ +A RS GEE+E Sbjct: 6 RLNLYLEGGMIQPDDVADVQAIITMFDQKYHIVLQEENADTFIAHLCAAFGRSATGEEVE 65 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 PL E+ AEL + +Q+ + ++ +NP E+ Y L ++ L Sbjct: 66 PLPPEVKAELEGLDSYPQSLQMLKDVMAATRNRLNPTEQDYALLHINNL 114 >UniRef50_B9CM75 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM75_9ACTN Length = 120 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 62/112 (55%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 R+ +L +AG +D++ + + VV ++E EC E + +TH+A+AL R+ EEI Sbjct: 7 RIEILKQAGFVDENDAESLKNVVALIEHECGPAESDEHIGIIITHIAAALKRNVEEEEIA 66 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 P++ + L E+ S + ++ + FA ++ E G++L ++ GL +A Sbjct: 67 PINQQALEEVYASPVFPKANRIANDISDMFAERLSKDEFGFVLVHIAGLLVA 118 >UniRef50_A6D1D8 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D1D8_9VIBR Length = 119 Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 M+ R++LL E VI + M+ V +L E ++ SEQ MAMTH A A+ R + Sbjct: 1 MKQRMSLLLEHNVISQIAFDATMRAVGILMIEWNVKEDSEQFQMAMTHFARAIDRVLQSN 60 Query: 61 EI-EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNP-CEEGYLLANLYGLWMAAN 117 I E LD+E+L E+ + +V ++ L + P E +LL+NLY + ++ + Sbjct: 61 PIVEGLDSEILKEMQDDDVFSDIVSMNNQLCSASGVPEMPETEISFLLSNLYAIKLSVS 119 >UniRef50_UPI0001794F42 hypothetical protein CLOSPO_02901 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI0001794F42 Length = 117 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/109 (23%), Positives = 57/109 (52%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 RL LL + ID+D +++++ + + + + E G M +TH+A AL R ++ E +E Sbjct: 6 RLKLLKDGAQIDEDTYNNLLKIIKSFKKDFQIELSEENGGMFITHLAVALERIKKKELVE 65 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 P++ + E+ +++ + + L K+ + V E ++L ++ L Sbjct: 66 PIEELIFEEVRNDKNFKKANDILESLEKDINISVPEVERPFILMHIVTL 114 >UniRef50_D0GNT1 PRD domain-containing protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GNT1_9FUSO Length = 120 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 61/110 (55%), Gaps = 1/110 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL++L + VID++I ++ ++ L+ + + + E G M +TH++ AL R ++ E Sbjct: 4 LKFRLDILKNSEVIDEEIYNKVISLIEHLDKKWEITLTEENGAMFITHLSMALKRIKQNE 63 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE-GYLLANL 109 + +D + E+ S + ++++ + K +E P EE Y+L NL Sbjct: 64 NVNNIDKTVFEEVMVSDKLDKIEEIYEDIEKNIFIEKLPEEEKKYILVNL 113 >UniRef50_C3WF22 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF22_FUSMR Length = 120 Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/109 (22%), Positives = 59/109 (54%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++TRL +LC G I + + M+ V+ + + + + + E G M TH++ A+ R + E Sbjct: 3 LQTRLEILCSTGTISNETREVMLNVIKMFQEKHQITLTEENGAMMTTHLSMAITRVKNNE 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ ++ E+ E+ +S + ++++ L +++ E+ Y+L N+ Sbjct: 63 PVKVINEEVYQEILESEFLEKAQEIYKDLESVLDVKLPEDEKKYMLVNI 111 >UniRef50_Q6LNG7 Putative uncharacterized protein PM1058 n=1 Tax=Photobacterium profundum RepID=Q6LNG7_PHOPR Length = 106 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%) Query: 20 KGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLAELAQSSH 78 G ++ V++L +E L +EQ MAMTH+A A R + I + LD ++LAE+ Sbjct: 8 DGTVKAVDLLVSEWQLDTSTEQLQMAMTHLARATDRILSDQPITQGLDEDILAEIISDDD 67 Query: 79 WQAVVQLHQVLLKEFALEVNP-CEEGYLLANLYGLWMA 115 + + ++ +L F +E P E + L+NL+ L+ A Sbjct: 68 FPVIQATNRQILGGFGIEQAPDAENTFFLSNLFSLYCA 105 >UniRef50_D1ALX8 PRD domain protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALX8_SEBTE Length = 116 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 64/109 (58%), Gaps = 1/109 (0%) Query: 1 MET-RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRG 59 MET RL++L EA +ID++ + + +++N + E L + +E G M +TH++ A+MR + Sbjct: 1 METERLDILVEAELIDQETYEKVKRIMNEVSEEFTLDLSTESGQMFITHVSMAIMRIKNN 60 Query: 60 EEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLAN 108 E ++N + E+ +S +++ ++ +++ E+ E+ YL+ N Sbjct: 61 EATTDVENAIFEEIKESENFENALRFAEIIENIIEHEIPKNEKEYLVIN 109 >UniRef50_Q67S02 Putative transcriptional antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67S02_SYMTH Length = 125 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 8/117 (6%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E RL LL E+G I ++ + ++ +E + V E G M TH+A AL R R G+ Sbjct: 6 LEMRLRLLQESGQISPEVAELTRWILKRVEERYDMTVTEENGAMFTTHLAVALERLRSGQ 65 Query: 61 EIEPLDNELLAEL-AQSSHWQAVVQLHQVLLKE----FALEVNPCEEGYLLANLYGL 112 I+ + +E LAE+ A W V ++V+ E V E GYL A+L L Sbjct: 66 AIDEMVSEGLAEVKAYPEEWAFV---NEVVAGEAGRRLGARVPEAEVGYLTAHLITL 119 >UniRef50_UPI0001C35378 PRD domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35378 Length = 120 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 7/114 (6%) Query: 4 RLNLLCEAGVIDK---DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 RL +L +GVI + D CK ++++ + E ++ M +TH+A A R G+ Sbjct: 10 RLEILLNSGVISQRISDYCKTAVKLLIKQKPEAD----GDRAAMFITHLAMAGQRILEGK 65 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 E +PLD ++L + Q + + +L + LE E+ +L +L L+M Sbjct: 66 EEKPLDGQILESVKQEPAYSKALDFLTYMLNQTDLEFPDTEKDFLTVHLCNLFM 119 >UniRef50_P44003 Uncharacterized protein HI0487 n=15 Tax=Haemophilus influenzae RepID=Y487_HAEIN Length = 125 Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 49/99 (49%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I++ I + ++ + L V + Q + H+A +L R RG + L +E+L E+ Sbjct: 16 INQSIIDVIFRLRDRLAHYWQADVNTPQVDFMLLHIACSLGRIERGGCVSSLYSEMLEEM 75 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + V+ +HQ LLK + E+ Y LAN++ L Sbjct: 76 QSAVIFPQVLAIHQDLLKLMPFSIPEAEQTYFLANIHSL 114 >UniRef50_C1I3F9 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3F9_9CLOT Length = 129 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 47/86 (54%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 RL++L +AG + K+ ++QV+N E + + + + +M +TH+ SAL R + Sbjct: 21 RLDILRDAGQLSKENYNKIIQVINYFEEKRGVKLLEDNASMFITHLCSALGRIEENNLVN 80 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVL 89 LD+ + L ++ ++ +++ + L Sbjct: 81 KLDDVVAQSLKENENYDEALKVAKDL 106 >UniRef50_B0K1N4 PRD domain protein n=3 Tax=Thermoanaerobacter RepID=B0K1N4_THEPX Length = 124 Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/111 (23%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R++LL + VID D K + ++ L + E M +TH+A ++ R + E++ Sbjct: 7 NRIDLLVQGNVIDFDTGKAIKKIDEELRVNYEICAEDEHYEMFITHLAMSIKRLKEEEKL 66 Query: 63 EP-LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 E +D+EL E+ ++ + + Q + +++ E+ ++L +L L Sbjct: 67 ESTIDDELFNEVKNCPNYYRALGILQNIEDRIEIKLPESEKRFVLLHLCNL 117 >UniRef50_C9A355 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A355_ENTGA Length = 117 Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 1/88 (1%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 +L +L ++G++D++ + V++ L E + +Q + +TH+A A MR + E + Sbjct: 5 KLTVLLDSGIVDQETYDYVFNVLSYL-LEKEIVEEEQQADVFLTHLAMADMRRKNNETVN 63 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLK 91 L++ + AE+ H+ +L Q L K Sbjct: 64 SLESFIQAEIEGDPHYLHSRELWQDLQK 91 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P45551 Uncharacterized protein yhfY n=52 Tax=Enterobact... 147 1e-34 UniRef50_A1JKN9 Putative uncharacterized protein n=5 Tax=Yersini... 142 5e-33 UniRef50_C4U196 PRD domain protein n=2 Tax=Yersinia RepID=C4U196... 137 1e-31 UniRef50_A8GJ09 PRD domain protein n=3 Tax=Enterobacteriaceae Re... 137 2e-31 UniRef50_Q7N5F7 Similar to unknown protein YhfY of Escherichia c... 131 7e-30 UniRef50_Q0I1W6 Putative uncharacterized protein n=3 Tax=Pasteur... 130 1e-29 UniRef50_C6AQX2 S-ribosylhomocysteinase n=4 Tax=Pasteurellaceae ... 114 1e-24 UniRef50_B9Y6L8 Putative uncharacterized protein n=1 Tax=Holdema... 111 9e-24 UniRef50_UPI0001794F42 hypothetical protein CLOSPO_02901 n=1 Tax... 108 4e-23 UniRef50_C3WF22 Predicted protein n=1 Tax=Fusobacterium mortifer... 108 5e-23 UniRef50_B9CM75 Putative uncharacterized protein n=1 Tax=Atopobi... 105 3e-22 UniRef50_A6D1D8 Putative uncharacterized protein n=1 Tax=Vibrio ... 105 6e-22 UniRef50_UPI0001C35378 PRD domain-containing protein n=1 Tax=Clo... 104 8e-22 UniRef50_Q6LNG7 Putative uncharacterized protein PM1058 n=1 Tax=... 103 3e-21 UniRef50_D0GNT1 PRD domain-containing protein n=1 Tax=Leptotrich... 101 8e-21 UniRef50_Q67S02 Putative transcriptional antiterminator n=1 Tax=... 100 2e-20 UniRef50_D1ALX8 PRD domain protein n=1 Tax=Sebaldella termitidis... 90 2e-17 Sequences not found previously or not previously below threshold: UniRef50_P44003 Uncharacterized protein HI0487 n=15 Tax=Haemophi... 89 3e-17 UniRef50_C1I3F9 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 85 9e-16 UniRef50_B0K1N4 PRD domain protein n=3 Tax=Thermoanaerobacter Re... 83 2e-15 UniRef50_Q5WK94 Putative uncharacterized protein n=1 Tax=Bacillu... 77 2e-13 UniRef50_C6P8P3 PRD domain protein n=1 Tax=Thermoanaerobacterium... 76 4e-13 UniRef50_C9A355 Putative uncharacterized protein n=1 Tax=Enteroc... 68 7e-11 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 62 7e-09 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 61 1e-08 UniRef50_Q65MQ9 Putative uncharacterized protein n=1 Tax=Bacillu... 61 1e-08 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 60 2e-08 UniRef50_A8U9C7 Putative uncharacterized protein n=1 Tax=Carnoba... 60 2e-08 UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 59 3e-08 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 59 5e-08 UniRef50_Q9KF98 BH0587 protein n=1 Tax=Bacillus halodurans RepID... 58 9e-08 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 57 1e-07 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 57 2e-07 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 57 3e-07 UniRef50_C7T9M3 Conserved protein n=2 Tax=Lactobacillus RepID=C7... 56 3e-07 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 56 3e-07 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 56 4e-07 UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaeros... 56 4e-07 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 55 9e-07 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 54 1e-06 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 54 1e-06 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 54 1e-06 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 54 1e-06 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 52 4e-06 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 52 5e-06 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 52 7e-06 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 51 1e-05 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 51 1e-05 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 50 3e-05 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 50 3e-05 UniRef50_C8NIB7 Putative uncharacterized protein n=1 Tax=Granuli... 49 3e-05 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 49 4e-05 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 49 5e-05 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 49 5e-05 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 48 9e-05 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 48 1e-04 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 48 1e-04 UniRef50_D1WYJ0 Transcriptional antiterminator, BglG n=3 Tax=Str... 47 2e-04 UniRef50_C1QBY4 PTS system IIA component; transcriptional antite... 47 2e-04 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 47 3e-04 UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax... 47 3e-04 UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=... 47 3e-04 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 46 4e-04 UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 ... 45 6e-04 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 45 7e-04 UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=La... 45 7e-04 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 45 7e-04 UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax... 45 0.001 UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.001 UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostri... 44 0.002 UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococc... 44 0.002 UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) ... 43 0.002 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 43 0.002 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 43 0.002 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 43 0.002 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 43 0.002 UniRef50_C7IC29 Transcriptional antiterminator, BglG n=1 Tax=Clo... 43 0.002 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 43 0.003 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 42 0.004 UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Br... 42 0.005 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 42 0.005 UniRef50_A6M2G4 Sigma-54 factor, interaction domain-containing p... 42 0.005 UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdema... 42 0.005 UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium ... 42 0.006 UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collins... 42 0.006 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 42 0.007 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 42 0.007 UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collins... 42 0.007 UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriace... 42 0.007 UniRef50_Q03E27 Transcriptional regulator with AAA-type ATPase d... 42 0.008 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 42 0.008 UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostri... 42 0.008 UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Pae... 42 0.009 UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Cl... 41 0.010 UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminoc... 41 0.010 UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR fa... 41 0.010 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 41 0.011 UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 T... 41 0.012 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 41 0.013 UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=The... 41 0.013 UniRef50_B0KCX3 PTS system transcriptional activator n=13 Tax=Cl... 41 0.014 UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Ent... 41 0.014 UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacte... 41 0.014 UniRef50_C6Q8D8 PTS system transcriptional activator n=1 Tax=The... 41 0.015 UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdema... 41 0.015 UniRef50_B6FWC4 Putative uncharacterized protein n=2 Tax=Clostri... 41 0.016 UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=... 41 0.016 UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ7... 40 0.019 UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exi... 40 0.019 UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_... 40 0.021 UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 40 0.022 UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 40 0.023 UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1... 40 0.023 UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Seb... 40 0.024 UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria... 40 0.024 UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-... 40 0.026 UniRef50_C3RIK3 Predicted protein n=3 Tax=Bacteria RepID=C3RIK3_... 40 0.027 UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Stre... 40 0.028 UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Fi... 40 0.035 UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 ... 40 0.035 UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostri... 40 0.035 UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Cl... 39 0.036 UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococ... 39 0.036 UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus... 39 0.037 UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clo... 39 0.041 UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacte... 39 0.042 UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysi... 39 0.046 UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exi... 39 0.048 UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6... 39 0.052 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 39 0.054 UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 39 0.058 UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus Rep... 39 0.059 UniRef50_B1C8U8 Putative uncharacterized protein n=1 Tax=Anaerof... 39 0.060 UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Ba... 38 0.061 UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostri... 38 0.064 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 38 0.066 UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bac... 38 0.066 UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lac... 38 0.070 UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 T... 38 0.071 UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12... 38 0.073 UniRef50_A6M2B9 Sigma-54 factor, interaction domain-containing p... 38 0.074 UniRef50_P15401 Levansucrase and sucrase synthesis operon antite... 38 0.079 UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium... 38 0.080 UniRef50_B5F2K0 Sigma-54 factor, interaction domain-containing p... 38 0.080 UniRef50_A0AGN0 Complete genome n=21 Tax=Firmicutes RepID=A0AGN0... 38 0.085 UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Ac... 38 0.087 UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysip... 38 0.092 UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collins... 38 0.100 >UniRef50_P45551 Uncharacterized protein yhfY n=52 Tax=Enterobacteriaceae RepID=YHFY_ECOLI Length = 120 Score = 147 bits (371), Expect = 1e-34, Method: Composition-based stats. Identities = 120/120 (100%), Positives = 120/120 (100%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE Sbjct: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV Sbjct: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 >UniRef50_A1JKN9 Putative uncharacterized protein n=5 Tax=Yersinia RepID=A1JKN9_YERE8 Length = 126 Score = 142 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 61/118 (51%), Positives = 87/118 (73%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RLN+LC++GVID+DI +G+ QV+N LE LPV EQG MA+THMA+ALMR+RRGE Sbjct: 5 IDARLNILCQSGVIDQDIGQGLDQVINRLEHFWQLPVHGEQGVMAITHMANALMRTRRGE 64 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 EI L+ +LAE+ QS + +++Q LL F+L+ E GYLLANLYGL+++++ Sbjct: 65 EIAALNPAILAEIVQSKEIHYIREINQDLLAYFSLKPAENEIGYLLANLYGLYLSSDT 122 >UniRef50_C4U196 PRD domain protein n=2 Tax=Yersinia RepID=C4U196_YERKR Length = 152 Score = 137 bits (344), Expect = 1e-31, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 75/119 (63%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRL +L +A VID + GM+ V+ LE L +R QG M +THMA+ALMR+ +G+ Sbjct: 32 METRLKILYDAQVIDSAVYFGMLNVLTRLEHHWQLSIRHPQGEMLITHMANALMRASQGQ 91 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 I +D+E+L E+ ++ + + +++ LL F EV E GYLLANLYGL +A E Sbjct: 92 VIPAIDDEILKEIEATAIFANIREINNDLLSLFVFEVPNHELGYLLANLYGLHLAQQTE 150 >UniRef50_A8GJ09 PRD domain protein n=3 Tax=Enterobacteriaceae RepID=A8GJ09_SERP5 Length = 122 Score = 137 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 77/118 (65%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRL +L +A VID ++ GM++VV LE L +R QG M +THMA+AL R+RRGE Sbjct: 1 METRLQILHDAQVIDTEVYIGMLEVVKRLEQHWQLNIRHTQGEMMITHMANALTRARRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 I +D ELL E+ S+ + + +++ LL FA + E GYLLAN++GL++A + Sbjct: 61 IIAAIDPELLDEIEASNVFANIREINSDLLSLFAFAIPDSELGYLLANVFGLYLAQTD 118 >UniRef50_Q7N5F7 Similar to unknown protein YhfY of Escherichia coli n=2 Tax=Enterobacteriaceae RepID=Q7N5F7_PHOLL Length = 118 Score = 131 bits (329), Expect = 7e-30, Method: Composition-based stats. Identities = 62/118 (52%), Positives = 84/118 (71%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ME RLNLL + VID+DI GM+QVV LE + +PVR+ G + +THMA+ALMRSRRGE Sbjct: 1 MENRLNLLYQGNVIDQDIHDGMLQVVAQLENDWEIPVRNALGEIVITHMANALMRSRRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 +I +DNELL E+ QS + + ++ LL F ++++PCEEGYLLANL+ LW A + Sbjct: 61 QISSMDNELLMEVRQSRIFSHLQAINASLLAHFDVQLHPCEEGYLLANLFSLWAAKGQ 118 >UniRef50_Q0I1W6 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=Q0I1W6_HAES1 Length = 146 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 64/116 (55%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL L + +ID+DI + + N L + + ++++Q M + H+A AL R +RG Sbjct: 25 IQQRLIFLVQRHLIDEDIMTITLNIRNRLGKKWRVNLKTKQVDMLLIHLAMALGRIKRGY 84 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + L+ + +E+ ++ + +++LHQ LL + E+ + +AN+Y L +A Sbjct: 85 VAKALNPDFFSEIERAVCFTKILKLHQELLTFIPFPIPKEEQSHFIANIYSLSLAQ 140 >UniRef50_C6AQX2 S-ribosylhomocysteinase n=4 Tax=Pasteurellaceae RepID=C6AQX2_AGGAN Length = 126 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 61/116 (52%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL +ID+ I ++ V L+ + V +EQ M + H+ASAL R +RG Sbjct: 3 IQQRLWAFQMRELIDEHIVDTVLNVRQHLQRHWQVDVETEQVKMMLVHIASALGRIKRGH 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 PL + LAE+ + + V+ +HQ +L+ L + E+ Y LAN+YGL + Sbjct: 63 RASPLYADFLAEIQSAVIFPQVLIIHQYVLELMPLSIPEEEQTYFLANVYGLVLDQ 118 >UniRef50_B9Y6L8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6L8_9FIRM Length = 124 Score = 111 bits (277), Expect = 9e-24, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 56/109 (51%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 RLNL E G+I D + ++ + + + H+ ++ E + H+ +A RS GEE+E Sbjct: 6 RLNLYLEGGMIQPDDVADVQAIITMFDQKYHIVLQEENADTFIAHLCAAFGRSATGEEVE 65 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 PL E+ AEL + +Q+ + ++ +NP E+ Y L ++ L Sbjct: 66 PLPPEVKAELEGLDSYPQSLQMLKDVMAATRNRLNPTEQDYALLHINNL 114 >UniRef50_UPI0001794F42 hypothetical protein CLOSPO_02901 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI0001794F42 Length = 117 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 58/113 (51%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL LL + ID+D +++++ + + + + E G M +TH+A AL R ++ E Sbjct: 3 LTLRLKLLKDGAQIDEDTYNNLLKIIKSFKKDFQIELSEENGGMFITHLAVALERIKKKE 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +EP++ + E+ +++ + + L K+ + V E ++L ++ L Sbjct: 63 LVEPIEELIFEEVRNDKNFKKANDILESLEKDINISVPEVERPFILMHIVTLL 115 >UniRef50_C3WF22 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF22_FUSMR Length = 120 Score = 108 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 60/113 (53%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++TRL +LC G I + + M+ V+ + + + + + E G M TH++ A+ R + E Sbjct: 3 LQTRLEILCSTGTISNETREVMLNVIKMFQEKHQITLTEENGAMMTTHLSMAITRVKNNE 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++ ++ E+ E+ +S + ++++ L +++ E+ Y+L N+ + Sbjct: 63 PVKVINEEVYQEILESEFLEKAQEIYKDLESVLDVKLPEDEKKYMLVNICTIL 115 >UniRef50_B9CM75 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM75_9ACTN Length = 120 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 62/114 (54%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 R+ +L +AG +D++ + + VV ++E EC E + +TH+A+AL R+ EEI Sbjct: 7 RIEILKQAGFVDENDAESLKNVVALIEHECGPAESDEHIGIIITHIAAALKRNVEEEEIA 66 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 P++ + L E+ S + ++ + FA ++ E G++L ++ GL +A Sbjct: 67 PINQQALEEVYASPVFPKANRIANDISDMFAERLSKDEFGFVLVHIAGLLVAHQ 120 >UniRef50_A6D1D8 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D1D8_9VIBR Length = 119 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 M+ R++LL E VI + M+ V +L E ++ SEQ MAMTH A A+ R + Sbjct: 1 MKQRMSLLLEHNVISQIAFDATMRAVGILMIEWNVKEDSEQFQMAMTHFARAIDRVLQSN 60 Query: 61 EI-EPLDNELLAELAQSSHWQAVVQLHQVLLKEFAL-EVNPCEEGYLLANLYGLWMAAN 117 I E LD+E+L E+ + +V ++ L + E+ E +LL+NLY + ++ + Sbjct: 61 PIVEGLDSEILKEMQDDDVFSDIVSMNNQLCSASGVPEMPETEISFLLSNLYAIKLSVS 119 >UniRef50_UPI0001C35378 PRD domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35378 Length = 120 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 7/117 (5%) Query: 1 METRLNLLCEAGVIDK---DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSR 57 + RL +L +GVI + D CK ++++ + E ++ M +TH+A A R Sbjct: 7 LNQRLEILLNSGVISQRISDYCKTAVKLLIKQKPEAD----GDRAAMFITHLAMAGQRIL 62 Query: 58 RGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 G+E +PLD ++L + Q + + +L + LE E+ +L +L L+M Sbjct: 63 EGKEEKPLDGQILESVKQEPAYSKALDFLTYMLNQTDLEFPDTEKDFLTVHLCNLFM 119 >UniRef50_Q6LNG7 Putative uncharacterized protein PM1058 n=1 Tax=Photobacterium profundum RepID=Q6LNG7_PHOPR Length = 106 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLA 71 +I + G ++ V++L +E L +EQ MAMTH+A A R + I + LD ++LA Sbjct: 1 MISQVAHDGTVKAVDLLVSEWQLDTSTEQLQMAMTHLARATDRILSDQPITQGLDEDILA 60 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEV-NPCEEGYLLANLYGLWMAA 116 E+ + + ++ +L F +E E + L+NL+ L+ A Sbjct: 61 EIISDDDFPVIQATNRQILGGFGIEQAPDAENTFFLSNLFSLYCAK 106 >UniRef50_D0GNT1 PRD domain-containing protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GNT1_9FUSO Length = 120 Score = 101 bits (251), Expect = 8e-21, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL++L + VID++I ++ ++ L+ + + + E G M +TH++ AL R ++ E Sbjct: 4 LKFRLDILKNSEVIDEEIYNKVISLIEHLDKKWEITLTEENGAMFITHLSMALKRIKQNE 63 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALE-VNPCEEGYLLANLYGL 112 + +D + E+ S + ++++ + K +E + E+ Y+L NL L Sbjct: 64 NVNNIDKTVFEEVMVSDKLDKIEEIYEDIEKNIFIEKLPEEEKKYILVNLLLL 116 >UniRef50_Q67S02 Putative transcriptional antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67S02_SYMTH Length = 125 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E RL LL E+G I ++ + ++ +E + V E G M TH+A AL R R G+ Sbjct: 6 LEMRLRLLQESGQISPEVAELTRWILKRVEERYDMTVTEENGAMFTTHLAVALERLRSGQ 65 Query: 61 EIEPLDNELLAELAQ-SSHWQAVVQ-LHQVLLKEFALEVNPCEEGYLLANLYGL 112 I+ + +E LAE+ W V + + + V E GYL A+L L Sbjct: 66 AIDEMVSEGLAEVKAYPEEWAFVNEVVAGEAGRRLGARVPEAEVGYLTAHLITL 119 >UniRef50_D1ALX8 PRD domain protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALX8_SEBTE Length = 116 Score = 90.0 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 62/109 (56%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 RL++L EA +ID++ + + +++N + E L + +E G M +TH++ A+MR + E Sbjct: 5 RLDILVEAELIDQETYEKVKRIMNEVSEEFTLDLSTESGQMFITHVSMAIMRIKNNEATT 64 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++N + E+ +S +++ ++ +++ E+ E+ YL+ N L Sbjct: 65 DVENAIFEEIKESENFENALRFAEIIENIIEHEIPKNEKEYLVINGCLL 113 >UniRef50_P44003 Uncharacterized protein HI0487 n=15 Tax=Haemophilus influenzae RepID=Y487_HAEIN Length = 125 Score = 89.3 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 51/106 (48%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 I++ I + ++ + L V + Q + H+A +L R RG + L +E+L E Sbjct: 15 QINQSIIDVIFRLRDRLAHYWQADVNTPQVDFMLLHIACSLGRIERGGCVSSLYSEMLEE 74 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + + + V+ +HQ LLK + E+ Y LAN++ L + + Sbjct: 75 MQSAVIFPQVLAIHQDLLKLMPFSIPEAEQTYFLANIHSLVLEQKQ 120 >UniRef50_C1I3F9 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3F9_9CLOT Length = 129 Score = 84.6 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL++L +AG + K+ ++QV+N E + + + + +M +TH+ SAL R Sbjct: 18 LTLRLDILRDAGQLSKENYNKIIQVINYFEEKRGVKLLEDNASMFITHLCSALGRIEENN 77 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + LD+ + L ++ ++ +++ + L E+ E +++ ++ L Sbjct: 78 LVNKLDDVVAQSLKENENYDEALKVAKDLEAVLG-EIPDSELDFIVMHVCTL 128 >UniRef50_B0K1N4 PRD domain protein n=3 Tax=Thermoanaerobacter RepID=B0K1N4_THEPX Length = 124 Score = 83.5 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 1/112 (0%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R++LL + VID D K + ++ L + E M +TH+A ++ R + E++ Sbjct: 7 NRIDLLVQGNVIDFDTGKAIKKIDEELRVNYEICAEDEHYEMFITHLAMSIKRLKEEEKL 66 Query: 63 EP-LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 E +D+EL E+ ++ + + Q + +++ E+ ++L +L L Sbjct: 67 ESTIDDELFNEVKNCPNYYRALGILQNIEDRIEIKLPESEKRFVLLHLCNLL 118 >UniRef50_Q5WK94 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK94_BACSK Length = 115 Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + TRL +L EAG I + QVV+ + E M +TH+A AL R + E Sbjct: 3 LYTRLQILKEAGTITDKAYRVTTQVVDEQVPDH----LHENYAMLVTHLAMALTRIEQNE 58 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + + ++ E+ S H A + + + + E+ +L + + + + Sbjct: 59 ALTGPGDAVMEEVLASPHLPAAKEAVEKIESLVGEPLPKEEQQFLYMHFVSTFSSVS 115 >UniRef50_C6P8P3 PRD domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8P3_CLOTS Length = 124 Score = 75.8 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL++L + ID++ +++ ++L++ + +EQ M +TH+A + R + Sbjct: 5 ITMRLDILLKGNAIDRETLSMTLKIDDLLKSYDTIYRNNEQYEMFITHIAMMIQRVKNNN 64 Query: 61 EI-EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + E LD+++ E+ + ++ V + + + + E +++ +L L Sbjct: 65 YVNEVLDDDIYDEIKKCLSYKEAVDILEKIEGISNTILPESERRFIILHLCNLL 118 >UniRef50_C9A355 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A355_ENTGA Length = 117 Score = 68.5 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + +L +L ++G++D++ + V++ L + + +Q + +TH+A A MR + E Sbjct: 2 IRDKLTVLLDSGIVDQETYDYVFNVLSYLLEK-EIVEEEQQADVFLTHLAMADMRRKNNE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALE-VNPCEEGYLLANLYGLW 113 + L++ + AE+ H+ +L Q L K + + E Y ++ + Sbjct: 61 TVNSLESFIQAEIEGDPHYLHSRELWQDLQKMTSEQSFADAELDYFYLHIINML 114 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 61.5 bits (148), Expect = 7e-09, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++TR LL +IDK+ + + ++ + E E + + H+A A+ R + E Sbjct: 199 IKTRNRLL---NLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIKRIKNNE 255 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 I +D E L EL Q+ + +L L F ++++ E GY+ +L G Sbjct: 256 II-IMDKEFLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMG 305 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 IDK I K + ++V+ LE E + + + H++ A+ R + E I+ +D ++L Sbjct: 216 NFIDKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKENIK-IDPDVLE 274 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 ELA+ ++ L + + +F +E+ E GY+ +L G + Sbjct: 275 ELAKLPEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKL 317 >UniRef50_Q65MQ9 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MQ9_BACLD Length = 121 Score = 60.8 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E +L++L + VI K+ + L + V + M THMA AL R + GE Sbjct: 6 LEEKLSILLTSRVITKNAFNTTLNTFVFLSEKLKKEVIKDS-EMFWTHMAMALTRIKEGE 64 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 E N ++ E+ ++ + A+ ++ + LE+ E Y +L Sbjct: 65 SEEVPANAIINEMYETPYKSAIEEVIDFIHSLAGLELPEGELVYFYLHL 113 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +ID D + + + L+++ + + H+A A+ R + GE IE + + L Sbjct: 197 NLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRLQNGETIE-MGEDNLQ 255 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 EL +++ ++ +L + L +E + + E GY+ +L G + + Sbjct: 256 ELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRSTTQ 303 >UniRef50_A8U9C7 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U9C7_9LACT Length = 116 Score = 60.4 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 1/113 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ +L +L E VI+ + +V+ ++ ++ +TH+A A R E Sbjct: 2 IQEKLTILRENNVINDSVYDYAQEVLK-FMKAQNIINNEDEADTFITHLAMATARQYTEE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 I +D + ++ + ++ + + E YL +L L Sbjct: 61 TINSVDQMINEQIKADQKYDEALKYWNEIAALAPIPFRENEAEYLHLHLVTLL 113 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 59.2 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +IDK I K + ++ + +L + + H++ A+ R R GE I ++ ++L Sbjct: 208 NLIDKSIIKKVENSLSETIKDINLKISDSAFIGLVVHISLAVQRLRNGETIS-MEQDVLN 266 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 EL ++ ++ Q + +EF ++V E GY+ +L G + Sbjct: 267 ELKSIEQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLRGSKL 309 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 58.8 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++D+ + Q + ++ + + + H+A A+ R ++GE I D L Sbjct: 200 GLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIERIKQGEAIH-FDPRDLQ 258 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L + ++ L + L + F +++ E GY+ +L G Sbjct: 259 ALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMG 298 >UniRef50_Q9KF98 BH0587 protein n=1 Tax=Bacillus halodurans RepID=Q9KF98_BACHD Length = 115 Score = 58.1 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 4/111 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL++L + I + + V T ++ TM +TH+A A+ R R E Sbjct: 4 LKARLDVLRDTNTITERASLIAERTVEQFVT----DENADSYTMLITHLAMAVTRIDRLE 59 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + P ++ E+ +S + + + + + E+ +L+ + Sbjct: 60 PLSPPPESIMKEIYESRDLEEAKRRVAWIEETMGDTLPQEEKEFLIMHFVS 110 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 57.3 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G+ID++ + ++ L+ E P+ +TH+A A+ R +GE I D L+ Sbjct: 200 GLIDREKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKGEGIH-FDEHTLS 258 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 EL + ++ + + L + F +E+ E GY+ +L G + Sbjct: 259 ELNGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKL 301 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 56.9 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 GV+ K M +++ L+ + + + H+ A+ R + GE I ++ L Sbjct: 194 GVVSKGELLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETIT-MEQNELE 252 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 EL + + + +++ L + F + + E GY+ +L Sbjct: 253 ELMNAKEYSSALEIAGELERAFGVTIPEAEVGYITIHL 290 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 56.5 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 1/104 (0%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L + + D++ ++ ++ LE + H+A A+ R ++G +I + + Sbjct: 202 LYKEALFDEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIHLAIAMKRLKKGNKIL-MSD 260 Query: 68 ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 E L +L + + L F +++ E GY+ +L G Sbjct: 261 EQLEQLKNEDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHLMG 304 >UniRef50_C7T9M3 Conserved protein n=2 Tax=Lactobacillus RepID=C7T9M3_LACRG Length = 116 Score = 56.1 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 +L +L + G + + + + + + V M + H++ AL RS + E ++ Sbjct: 8 KLQILYDVGKLSDED----LAFIRLADQYLVRTVGERDSEMFLIHLSIALERSHKQEPVD 63 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 L + L AE+ + + + + + + + + E Y++ +L + Sbjct: 64 ALPDNLWAEVTADPEYLNALNIWKHIAESRPVNFSDFETRYIIMHLVNIL 113 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 56.1 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +D + + + + ++ + + + + H A+ R ++GE+I +D L Sbjct: 192 HFVDLETIRLVQSTIQRVKEKHFDDMADQSFIALVVHATLAIERIKQGEQIR-MDAGQLE 250 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L + +L + L + F + + E GYL+ +L G Sbjct: 251 ALHKEDSLPVAQELAEALAQTFQITIPEAEIGYLVMHLRG 290 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 56.1 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 8/112 (7%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +ID ++ K + +V+ + + + TH+A A R + G IE LA Sbjct: 187 QLIDPELFKKIKEVIVQKVNKYKIEISDISLENLATHIAIACRRIQEGFVIEE-----LA 241 Query: 72 ELAQSSH-WQAV--VQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++ H ++ + ++ + + +L E Y++ +L G + +E+ Sbjct: 242 DVLVDDHPFEKIVANEIIKEVEDFTSLTFPETEIDYIIVHLLGTKLLHKKEL 293 >UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAI9_9FIRM Length = 696 Score = 55.8 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +++++I +++++ E E + + H+ A+ R G+ I ++ ELL Sbjct: 207 LLNEEILDKVIKILKKCEDEFLSRITRHSYIGLVIHLVIAIERLLSGKTIT-MEEELLRA 265 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 L + +++ +L +EF +EV E Y+ +L G M E Sbjct: 266 LKEDPYYKKAKELTAYFEEEFHIEVPESESAYVFMHLKGARMKYAVE 312 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 54.6 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++D DI K ++ + L E + + H+ A+ R E IEP D+ L + Sbjct: 206 LLDTDIMKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEP-DSRLDED 264 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + V + L KEF +E+ E Y+ ++ Sbjct: 265 IEHDRDYSLAVIIASSLEKEFDIEIPEIEVTYICLHI 301 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 1/93 (1%) Query: 26 VNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQL 85 + ++ P+ + H+A A+ R ++G I +D L EL + ++ QL Sbjct: 201 IRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIH-IDTNQLQELQKKPEYKLAEQL 259 Query: 86 HQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + + + A+++ E GY+ +L G + ++ Sbjct: 260 AKQIEQWVAVKIPKAEIGYITLHLLGARLRYDQ 292 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 54.2 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +I+ ++ + + +V+ + P+ + H+ A+ R R+GE+IE +D L+ Sbjct: 197 HLINLELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIRQGEKIE-IDPSYLS 255 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 +L ++ L + L ++ + + E GY+ ++ G E Sbjct: 256 KLKMDKEFELAADLARRLEQKLGMNIPEAEVGYMTMHIRGAKAHIETE 303 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 53.8 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 2/100 (2%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 ++D+ + + Q++ + ++ + + TH+ A R G IEPL Sbjct: 176 NQDLFQKVKQILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIEPLPFHFKESYT 235 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 ++ + K + P E Y+L +L G + Sbjct: 236 FERKVAK--EITGEVEKSVGIPFPPAEIDYILVHLLGTKL 273 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 53.8 bits (128), Expect = 1e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++ + V++ E + E + H+A A+ R G++I+ L E L Sbjct: 205 LVSGIDLTKIESVISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQ-LPEERLKV 263 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + +S ++ ++ +++ + F + + E GY+ +L G + Sbjct: 264 IKKSDEYKIAKKIGKIMEQIFDISIPDSEIGYVTLHLMGAKL 305 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 52.3 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E RL L + +I K ++ ++ + + + H++ AL R + GE Sbjct: 207 ENRLLNLMDRCIIRKVEATLTKKL-----SDLDVNLADSAYIGLVVHISLALQRIKNGEN 261 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 I +D E L EL+ + ++ ++ + + +F +++ E GY+ ++ G Sbjct: 262 IT-MDKEFLKELSITEEFKLAKEIVKGMETDFNMDIPVDEVGYITMHIRG 310 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 52.3 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGY 104 +TH+ AL+R R G + P++ E L E+ +S + ++ + + + E Y Sbjct: 215 LITHIVIALLRIREGCYV-PMEGEQLTEIRKSPSFPIARRISDSIGARTGVVLPDEEVAY 273 Query: 105 LLANLYG 111 + +L G Sbjct: 274 IAIHLTG 280 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 51.5 bits (122), Expect = 7e-06, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 3/100 (3%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++D + + V + ++P + G + H+A A+ R ++G+ I +D L Sbjct: 218 GLVDPAQIRRIDDAVAAETQDRNIPDSARVG--LVVHLALAVRRLQQGDTI-AMDAGTLE 274 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 EL Q+ + + + + F++ + E GY+ +L G Sbjct: 275 ELRQTEEFSVAETIAARMGEVFSISIPAAEIGYITMHLLG 314 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 51.1 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 K + ++V+ E++ E + H+A ++ R + ++++ L +L L Q Sbjct: 201 DYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHKKDVK-LSKAVLNNLKQKD 259 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + Q+ + + +F + + E GY++ ++ G M N+ Sbjct: 260 EYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNK 300 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 51.1 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 1/105 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 + ++ ++ + + +V L + + +TH+A A R + + + Sbjct: 179 NSTLLPEETYQFIQGIVRSRTKASGLYLSEIGLSNLVTHIAIACKRIEEKKIVM-MPETE 237 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 L E+ +Q Q+ + + +E E Y+ +L G M Sbjct: 238 LKEIQVQPVFQVAQQMAEDIRHVLGIEFPLSEMAYIAIHLMGAKM 282 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 50.0 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 1/103 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++DK + + + ++ + + + H+A A+ R +GE I D + L Sbjct: 200 GLVDKKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALAIERIMQGEAIH-FDAQHLQ 258 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 ++ + ++ ++ + L + F L + E GY+ +L G + Sbjct: 259 TISMTKEYETAEKIAKRLEEVFHLVIPKEEIGYITMHLMGAKL 301 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 49.6 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 2/98 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ID + + +VV + L + + H+A A+ R + G I +++L+ + Sbjct: 196 IDSSVVNILARVVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNPI-GQNDDLIRNI 254 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 VQL ++ KE + + E Y+ +L Sbjct: 255 GNERK-SEAVQLAAMVEKEVNVRLPDEEIAYIQIHLIA 291 >UniRef50_C8NIB7 Putative uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NIB7_9LACT Length = 122 Score = 49.2 bits (116), Expect = 3e-05, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E +L++L A VID+D K +++ + E + ++ + + H+A A R R+ E Sbjct: 2 LEEKLDVLVVADVIDEDTKKYILKASDFFRNEMKINDDTK-VEVFLIHLAMAESRRRKNE 60 Query: 61 EIEP-LDNELLAELAQSSHWQAVVQLHQVLLKEFALEV-NPCEEGYLLANLYGLW 113 ++ ++ + E+ ++ + L EV + E ++ +L L Sbjct: 61 VLDAKMEEIIRNEVNNHHNFAECKEFWSRLSNYIGEEVYSENELEFIYLHLLNLL 115 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 49.2 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 6 NLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 L E ++ + + V + + V S + H+ A+ R + + PL Sbjct: 199 EALAEGEAEHQENMTRVARCVAEVIDTENFTVNSVAYQNLIVHICIAVQRIQENCYV-PL 257 Query: 66 DNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 D E + +S ++ ++ + L + FA+ E Y+ +L G Sbjct: 258 DEERQERIRRSKEYRIAQKITERLNQSFAIRFPDQEIAYIAIHLAG 303 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 48.8 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 3/115 (2%) Query: 6 NLLCE-AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 +LL E AG++ KD + + +P+ + H+A A R R + Sbjct: 176 DLLSEKAGILPKDDIHVIRTAIMKQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSL 235 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW-MAANE 118 + + L ++ + +Q+ + + L ++ E Y+ +L G MA ++ Sbjct: 236 IPED-LHDIKLETEYQSAEAIVKELESALSVTFPEQETAYIAIHLLGTKRMAQSQ 289 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 48.8 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 G+ ++ K ++ +V + H+A A+ R R GE IE ++++ + Sbjct: 200 TGIFPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPM 259 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++ S L +L +++ E GY+ +L + ++E+ Sbjct: 260 KDVFDSQR-NNTEILVSMLEDRLDIKIPAFEVGYIQLHLTAAYNQQHDEL 308 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 48.1 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++DK + + Q+V+ +E+ + + H++ A+ R R+ E+I +D LA Sbjct: 200 LVDKQMIHDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQRMRKKEDIH-IDTATLAA 258 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L + ++ +L + + +F EV E GY+ +L G Sbjct: 259 LRKRREYRMAKELARRITAQFQTEVPEDEIGYITMHLMG 297 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++D + + + + + + + + H+A A+ R ++G+ I D+E Sbjct: 199 GLVDAEKLDKIEEQIQRMRNQLPYDLADSAYIGLVVHIALAMERLQKGDIIH-FDDEYKE 257 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 ++ ++ ++ L + F+L + E GY+ +L G + N+ Sbjct: 258 QIKDEQEYKIAAEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRENQ 304 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 47.7 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 26 VNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQL 85 + + E E + + H+A A+ R + G++I + E L L + + + Sbjct: 220 IQIAERELETVFSDAAFSGLVIHIAIAIKRIQLGKDI-IMPKEELKALEITKEFAVASNI 278 Query: 86 HQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 ++L F + + E GY+ +L G ++ Sbjct: 279 AKMLEDHFKVSIPLDEIGYITVHLLGSNVSKT 310 >UniRef50_D1WYJ0 Transcriptional antiterminator, BglG n=3 Tax=Streptomyces RepID=D1WYJ0_9ACTO Length = 128 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 4/115 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + R+ L E G + ++ + + LE E HL V M +H+ A+ R GE Sbjct: 5 LALRIQLFREGGQVKPEVADFVAAELAALEAEGHL-VTEATAAMLTSHLMMAVGRLLNGE 63 Query: 61 EIEPL--DNELLAELAQSS-HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 IE D+++ AELA + +E + E +L +L L Sbjct: 64 PIEQFLTDDQVAAELADHPEAVVRARAVAARAERELGAALPESEINFLGMHLAVL 118 >UniRef50_C1QBY4 PTS system IIA component; transcriptional antiterminator, BglG family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBY4_9SPIR Length = 621 Score = 46.9 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 I K + + V + + + + ++ ++ R + G+ I+ D ++L ++ + Sbjct: 172 INKSIEKFVIDFIKDNDIKLSEINLENFILYILVSIERIKMGKVIDCYDKDILKDIKEEE 231 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + QL ++L KE ++ N E+ ++ ++ + + E Sbjct: 232 -LKLANQLAEILEKESNIKFNEAEKIFIAIHIASKSLLISSE 272 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 37/101 (36%), Gaps = 2/101 (1%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE--PLDNELLAELAQSSHW 79 + ++ + + H+A A++R R G I+ E + ++ + + Sbjct: 197 IKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEMQDMKDTKAY 256 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++ + K+ L E Y+ +L G M + + Sbjct: 257 FVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNI 297 >UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax=Lactobacillus plantarum RepID=C6VLU3_LACPJ Length = 634 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ++K M +V+N + V Q + H A+ R + GE I + + Sbjct: 193 VNKQTLNQMQKVLNKFVKILKVDVNEYQYESLLIHTTIAIQRIKNGEFITQTTTQNFDTM 252 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 A S +V++ L+ F E+ E YL ++ + Sbjct: 253 AISPSTNKLVKM---LIVAFKCEIPDEEIAYLNMHVAAI 288 >UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=Q184K6_CLOD6 Length = 656 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 3/100 (3%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G+ +D ++ ++ E + + H+A A+ R R+GE IE L Sbjct: 198 GIFSEDDLSIIIDILRNFSRERKFEFSDYEFQSLVIHLAIAVERIRKGEYIE---ESLYI 254 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 +++ L + L ++F++ + E GY+ +L Sbjct: 255 GNIENNQMSNTNYLAKQLEEKFSILLPKSEIGYINLHLVA 294 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 54/99 (54%), Gaps = 2/99 (2%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +ID ++ +++ ++ L + +A+ H++ A+ R +RGE+IE +E + Sbjct: 199 LIDLNVILKVLETLHELRRDGEPIADVSYVGLAV-HLSLAVDRIKRGEKIEK-HSEGFEK 256 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + +++ ++A +L + L + F++++ E Y+ +L G Sbjct: 257 VLKTNEYEAAKRLVKKLEETFSIDIPQIEVAYVAMHLLG 295 >UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178876C Length = 295 Score = 45.4 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 45/99 (45%), Gaps = 5/99 (5%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE-- 72 D + + Q++N++ E + + +H+ + R R+G +I ++ L E Sbjct: 76 DPQVMEITDQILNLIGQEFPGTLNDKVYLALPSHIQFTIYRIRKGMDI--INP-FLEETR 132 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + + +++ K F +EV E G+L ++Y Sbjct: 133 ISFPKEYDIAAKAAELIGKTFDIEVPEDEIGFLTYHVYS 171 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 1/96 (1%) Query: 24 QVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVV 83 V+ E + + + H+A A+ R ++I +D+ L L+++ + Sbjct: 196 NVIKTAEDQLESTLSDYSFNNLLIHIAIAIKRIELAKDI-VMDDNELKNLSKTCEFSIAS 254 Query: 84 QLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + ++L + +++ E GY+ +L G + EE Sbjct: 255 AMARMLENRYDIKIPKSEIGYMTIHLLGSNVMLKEE 290 >UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=Lactobacillus RepID=Q040S8_LACGA Length = 282 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R LL D + ++V+ L+ E ++ + H+A+++ R+++G Sbjct: 55 QRKLLLETIHETDPIFFQISQKIVDRLKHEENIELADSVYITLTDHLATSVERAKKGLY- 113 Query: 63 EPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L N+ + E+ ++ + ++L +F L E G++ ++ Sbjct: 114 --LSNKFIWEVKNYYPKEYRYGLWALKLLDAQFDLNFPEDEAGFIAVHIIS 162 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 45.0 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 45/111 (40%), Gaps = 2/111 (1%) Query: 2 ETRLNLLCE-AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ET +++L E A ++ K+ + + + +P+ + + H+A A R R Sbjct: 172 ETEIDVLNEKADILPKEEIEIIRSAILKKMKNDRIPLSNMGLNNLIIHIAIACKRIRTEN 231 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + + +QA + + L + ++ E Y+ +L G Sbjct: 232 YVSLFPKD-MDHILHQKEYQAAEAIVKELESKLSVTFPKDETAYITMHLLG 281 >UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SK7_SYMTH Length = 275 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 6/121 (4%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 R L + D+ +++N+ P+ E H+A+ + R R+G Sbjct: 55 RNRKRFLRLTETLSGDVIGVAEEILNLAAARFG-PLGEEAHLTLAEHLAATVDRVRKG-- 111 Query: 62 IEPLDNELLAELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 P+ N LA++ + Q +++ + + E+G L +L G W + + Sbjct: 112 -MPIPNPFLAQIQLLYPEEYALAGQAVEMIASRLGVTLPEEEQGILALHLLGAWRRESPK 170 Query: 120 V 120 V Sbjct: 171 V 171 >UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D455_9CLOT Length = 639 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 1/91 (1%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 +G+ ++ ++ E + + + + H+ AL R R IE D L AE + Sbjct: 196 VEGIRIILRLVCREFSIVLSDASLSNLVIHVFIALTRYRFYNFIEA-DEALQAEYRDAVE 254 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + A +L + L + + + E Y +L Sbjct: 255 YAAAKRLTEALEEAYDFVIPDDEVIYYAMHL 285 >UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGK7_9FIRM Length = 507 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 5/91 (5%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIE-PLDNELLAELAQS 76 + Q++ +E P ++ M H+ AL R R G + PL++++ Sbjct: 313 DLVTQLIARVEERFGFPYSEDENLAENLMLHINMALERIRSGMNVSNPLNDDIYQS--HP 370 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 + V Q + ++ V E GY++ Sbjct: 371 KLYDIVKQSFIEVFNHTSVPVPDDEIGYIVI 401 >UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GK2_PEDPA Length = 625 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRS-EQGTMAMTHMASALMRSRRGEEIE-PLDNELLA 71 I K+ + +++ + + + + E H++ + R + G+ I+ P+ ++ A Sbjct: 280 ISKETLNLIKSILSYVRSIYRIDLTGPEFLNQFAIHVSRLIQRLKSGKSIQNPMATQMKA 339 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++ V + + + +EV E Y+ ++ Sbjct: 340 --QSPTVYECAVLISHKIASQVGVEVPDNEIAYIAMHI 375 >UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Y8_9BACI Length = 200 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 7/101 (6%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMT-HMASALMRSRRGEEIEPLDNELLAE 72 +D+ M + ++ LET + +E + +T H+ A+ R G+ + N L E Sbjct: 2 VDEQFVGVMNEFIDKLETRFGANL-NEHIHIGLTDHLHFAVKRIENGQ---GIHNPFLQE 57 Query: 73 --LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 LA + +L + + + + P E G++ +++ Sbjct: 58 TELAYPQEFAVATELTEWFGNQVGIRIPPGEIGFITLHIHS 98 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGY 104 + H+A AL+R G + PL +E ++++ + S + A ++ + +E+ E Y Sbjct: 185 LLVHIAIALVRINAGCYV-PLASEDMSDIERRSEYAAARRVAGGIKSRLGMELPEEEVAY 243 Query: 105 LLANLYG 111 + +L G Sbjct: 244 IAIHLAG 250 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 40/97 (41%), Gaps = 1/97 (1%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D+++ + ++ ++ + + H+ +++R + G+ I+ L +EL + Sbjct: 182 DEELFTRIQAIIADIDFPESFYMPYANFKNLVVHIYISILRIKEGKYID-LSDELSKRVI 240 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + ++ + L K+ L E YL +L Sbjct: 241 SYDEFNIANKVVKELSKKLDLTFPEDEILYLTMHLIS 277 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGY 104 + H+A A+ R ++G +E D L+ +L + ++ + +EF++ + E Y Sbjct: 234 LIFHLAIAVERVKKGAIVEE-DPGLVNKLGTWDEYALAGKIRGEIEREFSIHMPDQELSY 292 Query: 105 LLANLYGLWMAANE 118 +L +L G MA +E Sbjct: 293 ILLHLLGSKMAYHE 306 Score = 38.8 bits (89), Expect = 0.051, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 5/97 (5%) Query: 15 DKDICKGMMQVVNVLETEC--HLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLA 71 ++D+ + + ++++ +TE L E + H+ A+ R I P+ E+ Sbjct: 318 EEDLLEIIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPAMFRMSEKMSIYNPVLPEIKR 377 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLAN 108 E + + +V+ E A EV+ E G+L + Sbjct: 378 E--YPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMH 412 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 2/104 (1%) Query: 6 NLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 L ++ + ++ ++ E L V H+A + R R G EI+ L Sbjct: 185 EYLGQSRFFTDISFEELVIIILDETREAKLKVSDFIIQNLSLHLALGIKRLREGFEIKEL 244 Query: 66 DNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 E E++ +Q ++ Q + + E YL +L Sbjct: 245 GIE--QEVSDRVEYQVAQRIVQRIEVIADVSFPQEEIAYLTLHL 286 Score = 38.4 bits (88), Expect = 0.065, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIE-PLDNELLA 71 D+++ K +++V+ L E + + + H++ ++R RG IE PL E+ Sbjct: 298 DQELSKEVVKVLKRLSQEFRFSLIEDHQLFNGLLDHLSPMMIRLSRGIRIENPLTEEIKK 357 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 E ++AV + +N E YL +L Sbjct: 358 E--NPKVFEAVKTHFSNMPALKNYTINEDEWAYLALHL 393 >UniRef50_C7IC29 Transcriptional antiterminator, BglG n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IC29_9CLOT Length = 643 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Query: 24 QVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVV 83 +++ E + + E TH+ ++ R +G +++ ++EL+ Q Sbjct: 218 NIIHNAEKKFAFFMPEEHYNSMFTHLVISIGRLLKGIKVDD-ESELIEGQCNDIETQVAR 276 Query: 84 QLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + L +EF + + E Y+ +L GL + + + Sbjct: 277 YIVSRLEEEFKISIPQAEFAYICMHLMGLNIYSGTD 312 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + + + LE + L E + H + R++ + I + E + Sbjct: 187 PHELDIVTRELKQLELDAQLAFTDEAFDNLLIHTLLMIRRTKLKQPITFSEQE-KVFVRG 245 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + L + FA+ E YL A++ G Sbjct: 246 KPEFRWTGAFIRKLERFFAVRFPEDEVAYLTAHILG 281 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 42.3 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 2/81 (2%) Query: 31 TECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLL 90 E L + + H+A +L R G +I+ LD+ + E + ++ + + Sbjct: 206 REGQLKLSDFVIQNLVIHIALSLKRIGEGFQIKQLDSWSMDEYREEGKI--AEKILKRVY 263 Query: 91 KEFALEVNPCEEGYLLANLYG 111 L+ E Y+ +L Sbjct: 264 HSTGLKFPKEEVDYITLHLVS 284 >UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXV4_BRAHW Length = 620 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 8/92 (8%), Positives = 36/92 (39%), Gaps = 2/92 (2%) Query: 20 KGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + ++ ++ + + + ++ ++ R + I + +++ ++ S Sbjct: 174 EKLIGIIINFLNKYEIKFSEINLENFIQYINVSISRIKNNNFICSYEKDIIKDI--SEEI 231 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + +L + + E +E N E ++ ++ Sbjct: 232 RLSEELIKQIQNEIDIEFNDTEIIFIAIHIAS 263 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 4/103 (3%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 E + + + QVV + ++ + + H+A A+ R + + D Sbjct: 188 ERNFFSEVNLEMIEQVVISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTD--- 244 Query: 70 LAELAQS-SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L ++ S ++A + + + + E YLL +L Sbjct: 245 LEDIEFSIPEFRAAQDIIKEIDLSEGIHFPESEISYLLLHLSS 287 >UniRef50_A6M2G4 Sigma-54 factor, interaction domain-containing protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2G4_CLOB8 Length = 895 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELL 70 ++DKD+ + +++ E E + + + H+++++ R RR ++I P + + Sbjct: 434 NIVDKDVMDIIEEIILFCEEELGIKLDKKISYGLAVHISNSIDRIRRNKKIVNPKLSSIR 493 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYL 105 E + + +++ + + + E G++ Sbjct: 494 EE--NKKEFSVALDALKMIERSIDISMPIDEAGFI 526 >UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2S2_9FIRM Length = 632 Score = 42.3 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 42/107 (39%), Gaps = 3/107 (2%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 ++ L + + + V+ ++ + ++ + H+ A+ R I Sbjct: 173 IDFLPQETMYKSSQLSLIQHVIAESLMNANISITADSCSALSLHILIAINRVETNNLI-- 230 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + E+ + QS ++ + +++ + + F + + E Y ++ G Sbjct: 231 -NQEVSEAMRQSLEYKTAIDINRSIEEIFHVSLPEAELCYFAFHING 276 >UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium RepID=A0Q2H7_CLONN Length = 279 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 5/106 (4%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L +D I + ++ ++ E P+ + H+ + R + G L+N Sbjct: 63 LQFTNNLDPKIAELTKDILKIISEEFSRPLNPNVHVNLIDHIQFTVKRLKSGMI---LEN 119 Query: 68 ELLAE--LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L E L + + ++L K + E G++ ++ G Sbjct: 120 PFLTETKLLYPKEYAVAEKAVEILSKGLNMHFPDAEIGFITLHICG 165 Score = 38.4 bits (88), Expect = 0.078, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 25 VVNVLETECHLPVRSEQGTM--AMTHMASALMRSRRGEEIEPLDNELLAELAQSS--HWQ 80 ++N + + ++ + + H+ L R + + L N LL EL + + ++ Sbjct: 185 ILNFVSKKLNITLDPHSFEYKGFVNHLRGVLNRIKNNKI---LKNNLLTELKKRNIIEYK 241 Query: 81 AVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + +++ + V E GY+ ++ L Sbjct: 242 IAYDVSKIIENVLQISVPEDEIGYITIHIMKL 273 >UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAF5_9ACTN Length = 272 Score = 41.9 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 48/109 (44%), Gaps = 12/109 (11%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 VI +D +V +L E ++ + + H++ AL R R+G +N LL E Sbjct: 65 VISED-------IVQMLRRELNVDINDKILIALADHISLALERERKG---ISCENPLLLE 114 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + Q + + Q++ + ++++ E+G++ ++ M + Sbjct: 115 IQQFYRKEYALAGRALQIIKEYMGIQMSEEEQGFITLHIVNATMPQRSD 163 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 1/102 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + +++ E + + + + H+A ++ R G+++ +L + Sbjct: 189 DLNAIQRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDLNLLKKEKE 248 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 W+ L + + K F + V+ E GY+ +L G + + E Sbjct: 249 -WEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIE 289 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 1/93 (1%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + + + L+ + L E + H + R + + I L + +A + + Sbjct: 193 VDFVTKEIKSLQKKHSLYFTDETFESLLLHTLLMVRRIKMKQPIS-LSPKEMAAVKKKKE 251 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 +Q Q L FA+ E YL ++ G Sbjct: 252 YQWTFACLQRLEPVFAIRFPEEEAVYLTLHILG 284 >UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP7_9ACTN Length = 295 Score = 41.9 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 +RL L + I + +V +L E + H++ AL R + G Sbjct: 56 SRLERLIKG--IPSEYLLIAEDIVAMLRRESDSVIDDSVLIALTDHISMALEREQAGIIC 113 Query: 63 EPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 DN LL E+ + ++ ++ +++ +E++ E G++ ++ M + Sbjct: 114 ---DNPLLFEIKRFYGREFELALKAREIIRGHLGIEISEAEVGFIALHIVNATMKQRTD 169 >UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriaceae RepID=O07655_ECOLX Length = 293 Score = 41.5 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 44/112 (39%), Gaps = 5/112 (4%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E + L +D + ++V E + + H+++A+ R G + Sbjct: 71 EQKNKLYKLIEHVDIEYVSVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQ 130 Query: 62 IEPLDNELLAELAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 I +N L E+ + + ++ ++F++++ E G++ ++ Sbjct: 131 I---NNVFLDEIKALYKAEYAISRDALTIINEQFSVQLPDDEIGFIALHILN 179 >UniRef50_Q03E27 Transcriptional regulator with AAA-type ATPase domain and a DNA-binding domain n=29 Tax=Bacilli RepID=Q03E27_PEDPA Length = 976 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 1/103 (0%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A ++DK I QV +E + + H++S + R + G+ + + N+L+ Sbjct: 486 AEIVDKGIIDFAKQVQPKIENQLDYHFKENFIYAMSLHISSFIKRIQSGKPMRLMGNDLV 545 Query: 71 AELAQ-SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 A + + ++L + + + + E YL L L Sbjct: 546 AMVKDYPEELAVAKSIKEMLEQRYGMPIPESESYYLAVLLISL 588 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 3/63 (4%) Query: 48 HMASALMRSRRGEEI-EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLL 106 H+A AL R R G I PL + A + A + + L + E G+L Sbjct: 346 HLAPALDRVRAGLPIRNPLLETVKA--RYPELFAAAESASREVFAPHGLRLPDEEIGFLA 403 Query: 107 ANL 109 +L Sbjct: 404 MHL 406 >UniRef50_B0MGF2 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0MGF2_9FIRM Length = 291 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Query: 22 MMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--AQSS 77 + V++ ++ + + +TH+ + G ++ ++ EL + Sbjct: 186 IKNVIDKVKDYFQMELTETSLNYERFITHLKFLSRKVMSGGGMDEIEPELRKMISAMYPD 245 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 +Q ++ + + KE+ E++ E YL ++ + + + Sbjct: 246 EYQCSREIAEYIKKEYRREMSEGEIVYLTMHIERIKSSNQTK 287 >UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTN7_PAESJ Length = 286 Score = 41.5 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 20 KGMMQVVNVLE--TECHLPVRSEQGTMAMTHMASALMRSRRGEEIE-PLDNELLAELAQS 76 + M ++V +E E L +S + H+ + R + +E E P E+ ++ Sbjct: 186 ELMNEIVERIEGWREAPLSKKSSDYARLIMHLRYMMERILQNKETENPFSAEIKDKI--P 243 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + Q + Q++ + ++V+ E GYL +LY L+ + + E Sbjct: 244 TEHQKAELIAQMIGERLNVKVSSDEIGYLAMHLYRLFRSVDAE 286 Score = 38.4 bits (88), Expect = 0.067, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 45/99 (45%), Gaps = 3/99 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA-E 72 +D ++ + Q+++ + PV + +H+ + R R G EI ++ L + Sbjct: 75 LDPEVVQISEQIIDEIRERLGTPVDPKVYFALPSHIQFVVYRLRNGMEI--VNPFLYETK 132 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + ++ + +++ ++F + + E G+L ++Y Sbjct: 133 MCYPQEFKIAAKAAKMISEKFDITIPEDEVGFLTYHVYS 171 >UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q184U4_CLOD6 Length = 514 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + + Q+ + E + H+A + R I L EL + Sbjct: 202 DFEKLSQITLHTLQVEKSNLSDEYYINFLIHIAICIKRISIKRYIN-LSEGFFRELLEHE 260 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +++ L L + F +E E Y+L ++ GL Sbjct: 261 YFEKSKILCANLSEAFDVEFIDEEVCYILLHIEGLL 296 >UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG9_9FIRM Length = 217 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 5/102 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G I + + + ++ + E + ++ + H+ A+ R + LDN Sbjct: 3 GAIPPEYFELVEEIFEKAKEEYGFLPKEKETLALLDHIHFAIKRMKENLV---LDNPFET 59 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 E+ Q W+ + + + + F +E+ E GY+ ++ Sbjct: 60 EIRQFYPKEWEIGLYAKKCIKRRFGIEIPDAEVGYIAMHIIA 101 >UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7A6_THEAS Length = 646 Score = 41.1 bits (95), Expect = 0.010, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 3/86 (3%) Query: 26 VNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQL 85 V + + E H+A ++ R R G +E +E L +A + Sbjct: 199 VRRALEMAQVRLTGEAVLGLTVHLAVSIKRVRTGGALEICRDEGLE---GRREMEAARLM 255 Query: 86 HQVLLKEFALEVNPCEEGYLLANLYG 111 + + + + + P E YL ++ Sbjct: 256 ARWVEEGLGVTMPPGEVEYLAMHVMS 281 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 41.1 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGY 104 + H+A + R R G + + A + QS +Q +++ + + + E Y Sbjct: 222 LVLHIALMVQRIRSGYPLAFF--SIPAAIRQSDEYQVALRILYRVEEVMGIRFPKEEANY 279 Query: 105 LLANL 109 + +L Sbjct: 280 IALHL 284 >UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ73_9FIRM Length = 273 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLD 66 L +D + +V++ MA H+A AL R RRG + PL Sbjct: 63 LQRVNGLDPHAVELAARVLDEARKSFPAMTDDILLPMA-DHIAMALERCRRGIRLPNPLQ 121 Query: 67 NELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++++ + ++ Q + +E L + P E GYL +++ Sbjct: 122 HDIM--VMFPDEYRIAEQGLHAIEREEGLSLPPEEAGYLSLHIHA 164 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E+RL E+ +I++ I + + + + + V + G + H+ SAL R R Sbjct: 294 LESRLET-PESELIERVIVE----INEMYQLDFRQDVILKNG--LLLHLESALHRIRLN- 345 Query: 61 EIEPLDNELLAELAQSSHWQA--VVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 P++NEL+ E+ + + L L F ++++ E G+L + G Sbjct: 346 --MPINNELIEEIKNNYPFPMQLAKILASSLETNFNIKIDINEVGFLTLHFCG 396 Score = 38.4 bits (88), Expect = 0.066, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 31/98 (31%), Gaps = 2/98 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + ++V + +P+ + H+ A+ R R + E Sbjct: 188 ISSTDKVSVEEIVIRNIRKYQIPITDIGFRNLIIHVEIAISRLRFQNNSIDQKPNTIEE- 246 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 S + + + + + L + E + +L G Sbjct: 247 -HSDEYYCAKAIAKEIEAKINLTIPENEIANIYLHLLG 283 >UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6P9_THEAS Length = 285 Score = 40.7 bits (94), Expect = 0.013, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 9/94 (9%) Query: 33 CHLPVRSEQGTMAMTHMASALMRS-------RRGEEIEPLDNELLAELAQSSHWQAVVQL 85 L S + H++ ++ R G+ I L+ + E + ++L Sbjct: 193 FRLDRLSPHYMRFIRHLSFSIDRVEGGIEGDLEGDPISTLEETMKRE--NPVPYGIALKL 250 Query: 86 HQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + P E YL +++ L+ + + Sbjct: 251 CLYMRNALDRPIPPAEVVYLTIHIHRLYNSKQRD 284 >UniRef50_B0KCX3 PTS system transcriptional activator n=13 Tax=Clostridia RepID=B0KCX3_THEP3 Length = 901 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 V+DK I + +N + P + H+AS++ R G++I E + + Sbjct: 443 VVDKKIVDIVNDFLNYASKKLKRPFSEKTLYGLSMHVASSVERILSGKDIVNHQLENIKK 502 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 + + ++ L + + KEF ++V E G++ L Sbjct: 503 VYE-KEFEVANVLRERVQKEFNIKVPDDEVGFVTMFLC 539 >UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Enterobacteriaceae RepID=C6DCM5_PECCP Length = 278 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 42/100 (42%), Gaps = 5/100 (5%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I D Q++ + + L V+ H+ A+ R ++G+ I+ L +L ++ Sbjct: 66 IPPDCLAVTQQIITLAQKTLRLNVQDTLFLALSDHINFAIQRHKKGQTIKNL---MLWDI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 Q S + ++ ++ +++ E G++ +L Sbjct: 123 RQFYHSEFAVGLEALALIRTRLGIDLPEDEAGFIALHLAN 162 >UniRef50_A8R9W1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R9W1_9FIRM Length = 515 Score = 40.7 bits (94), Expect = 0.014, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 2/105 (1%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ID +I + +QV+ E + + H+ +R R G + D + EL Sbjct: 199 IDDEIKE-FLQVLKHSENSYLHTLLCPSLFQVLLHLFICFIRVREGHYVSLSDP-FIEEL 256 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 ++ +L Q L + + + + E YL L L +++ Sbjct: 257 KSKPFYEETKKLIQALEEYYHISFSETEIRYLQVFLISLQSSSDT 301 >UniRef50_C6Q8D8 PTS system transcriptional activator n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8D8_9THEO Length = 897 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 40/95 (42%), Gaps = 3/95 (3%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 V+ +I + + +++ E + + E H+ +A+ R +R +I ++ +L Sbjct: 434 NVVGAEIVRAVEEIIKFSEKRLNKVLSKEMYYAMAVHIYTAIERIKRNRKI--VNPQLNK 491 Query: 72 -ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYL 105 S + + +++ + + + E G+L Sbjct: 492 IRTEYSEEFNIALDCLKIIERVLDVSMPIDEAGFL 526 >UniRef50_B9Y980 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y980_9FIRM Length = 274 Score = 40.7 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 4/93 (4%) Query: 24 QVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--AQSSHW 79 Q+ ++E L + + + THM L R + G++ + + A+L + Sbjct: 180 QITAIIEKHFKLEINRDSFNYSRFATHMIYLLRRLKEGQKTTDDNRRIYAKLLEEYPDTY 239 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 Q V ++ + L + +++ E YL+ ++ L Sbjct: 240 QCVDEIARFLEENIQSKLDENEMLYLILHVNRL 272 >UniRef50_B6FWC4 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FWC4_9CLOT Length = 985 Score = 40.7 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 2/117 (1%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E R + + ++ + M +V+ V++ + V + + TH+ A+ R R + Sbjct: 488 ENRKKIHIMSENLNPETINIMNKVITVIKNQYRF-VNNGLYMVLATHIEEAIKRVRNEKN 546 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 I + + E S + + ++ + + E GY+ +Y M Sbjct: 547 IINPSLDNIKE-NMSEEYDLARYVVTIIENIAKISLPEDEIGYIAYYIYKFCMNEET 602 >UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=Paenibacillaceae RepID=C0ZH78_BREBN Length = 285 Score = 40.7 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEE 102 +TH+ A+ R R+ + I+ N LL + +Q +L Q + + V E Sbjct: 215 LITHLRFAVERIRQQKFIK---NPLLDRVKTTMPEAYQLATELAQYISTRLEIAVPEDEV 271 Query: 103 GYLLANLYGLW 113 GY+ +LY L Sbjct: 272 GYMALHLYRLL 282 >UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ76_ENTFA Length = 285 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLD 66 + ++ + + M +V++++ P+ E T M H+ + R + D Sbjct: 166 VQNSQENEKVTEIMKDIVSIVQYHLGAPMNHESINYTRFMQHLQYFVQRILTNDTYSEND 225 Query: 67 NELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 +EL +++Q + AV ++ ++ F ++ E+ YL+ ++ Sbjct: 226 SELYQQISQLYPEAYGAVKKIELYVIGTFGKLISEDEKTYLMMHI 270 >UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exiguobacterium RepID=B1YKV9_EXIS2 Length = 285 Score = 40.4 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 5/102 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G +D++ M ++V+++ET V H+ R +G E+ N LA Sbjct: 70 GHLDENFIALMNEIVSMIETRFGKRVDEHIHIGLTDHLTFTFKRLEQGMEVT---NPFLA 126 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 E + ++ + + E + P E G++ +++ Sbjct: 127 ETEALYPEEYALAEEIVEFISAEMNFYLPPAETGFIALHIHS 168 >UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_9MOLU Length = 613 Score = 40.4 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 E +D DI + + +V + + + H+ A R + E +D+E Sbjct: 157 EEYQMDFDILQRIRDIVISSIANADYVISDDVLDNLVAHLYIAYYRVMKKE-YANIDSEW 215 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L E+ + + + +++ K A+E E YL +L G Sbjct: 216 LEEIKEEKEYSLGCAIMELMNKIMAMEYRIEEVAYLTMHLCG 257 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 40.0 bits (92), Expect = 0.022, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 7/101 (6%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELL 70 V D + K +V +E E L + ++Q M H+ A+ R R G I N +L Sbjct: 308 VFDDEYYKLAKAIVEKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIR---NPML 364 Query: 71 AELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 A++ Q + ++A V V+ + + ++ E GYL ++ Sbjct: 365 ADIKQHYTLAFEAAVIGQAVIKDKLGISIDENEIGYLALHI 405 Score = 38.0 bits (87), Expect = 0.086, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 1/115 (0%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L L + ++ + ++ E + + H+ A R G I Sbjct: 186 LTSLQLTAFMKEEQLADIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHIS- 244 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 L + ++++ + ++ L + E Y+ +L G + A E Sbjct: 245 LYRKDMSDICSQHEYYVAQKMIARLNTHLGVSFPEMEIAYIAIHLLGTRLVAENE 299 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 40.0 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 1/94 (1%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 ++ + +++ E + + E + + R ++G ++ L+ E A L + Sbjct: 189 EEELDSVYRIIVSTEQQIGMEWTDETILHLTLRIWLSANRMKQGRTVQ-LEEEEKAALRE 247 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++A Q+ L + F L V E GYL L Sbjct: 248 TLQFKAATQIADELGERFDLRVPEDEIGYLAIYL 281 >UniRef50_D2MNU4 PRD domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MNU4_9FIRM Length = 275 Score = 40.0 bits (92), Expect = 0.023, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 3/96 (3%) Query: 19 CKGMMQVVNVLETECHLPVR--SEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS 76 + M ++ ++ET+ + ++ + MTH+ A+ RS EI+ E++ E Sbjct: 174 FQVMQDILGLIETDLGIDLKQYEDARQRLMTHIRFAIKRSLEHSEIQNDLQEVIQE-RYV 232 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + ++ V+ +++ L +N E YL +L + Sbjct: 233 RAFALAKKISTVVQEKYDLSLNEAELAYLSIHLENI 268 >UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALQ6_SEBTE Length = 281 Score = 40.0 bits (92), Expect = 0.024, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 39/106 (36%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + ++V + E + + + H+ A+ R G+ ++ + L E+ Sbjct: 68 IPAEYIDITEKIVKLAEEKLQMKLSDTIYITLSDHIYFAVKRFGDGQSLKNI---LFWEI 124 Query: 74 AQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 S + + +++ L + E G++ ++ + N Sbjct: 125 KSSYKDEYLIGQEALKIIKDTVDLSLPDDEAGFIALHIVNAELNEN 170 >UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria RepID=B4F212_PROMH Length = 284 Score = 40.0 bits (92), Expect = 0.024, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 45/110 (40%), Gaps = 8/110 (7%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L+LL I D + ++ + + L + + H+ +++ R + G I Sbjct: 60 LDLLSN---ITLDYVEIADNIIQYAKEKMTLDTQDSIYIALIDHIQASIERYKEGTFIR- 115 Query: 65 LDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 N++L E+ S + + +++ F + + E G++ ++ + Sbjct: 116 --NKILWEIKNFYSEEFDIGLYGLKLINDRFNISMPEDEAGFIALHIASI 163 >UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-binding protein n=3 Tax=Staphylococcus RepID=B9CU63_STACP Length = 675 Score = 40.0 bits (92), Expect = 0.026, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 + ++D D + +++ + + H+ ++ R + GE + L+ ++ Sbjct: 193 QQSLVDLDRIFKIERILMDYLGQLPYTLTESSYLTLTIHIVLSITRMQNGEYVS-LNKDI 251 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + ++ + L + +E N E ++ +L G Sbjct: 252 YETVKDTFEHEVATEIAKRLEEIHNVEFNQAEITFITIHLRG 293 >UniRef50_C3RIK3 Predicted protein n=3 Tax=Bacteria RepID=C3RIK3_9MOLU Length = 226 Score = 40.0 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 6/97 (6%) Query: 24 QVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVV 83 ++ + L + H+ A++R + I P+ N +A Q + Sbjct: 20 NIIKNTADDYDLFLSENSINNLSVHLTIAIIRIKSNNYI-PMSNSQIASYKQDHSYPYAK 78 Query: 84 QLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 L L +EF ++ E L ++++ N+++ Sbjct: 79 MLCDRLAREFEIDFPEAEIS-----LVSMYLSKNQKL 110 >UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WHN0_STRDG Length = 661 Score = 39.6 bits (91), Expect = 0.028, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 5/87 (5%) Query: 34 HLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEF 93 L + + H+A A+ R ++G I P++ L E + L Sbjct: 209 ELKLSDYAIQNLVIHLALAIQRFQKGFRIAPVE---LCECKYQKELLVARNIADRLANRL 265 Query: 94 ALE--VNPCEEGYLLANLYGLWMAANE 118 E + E Y+ +L +A + Sbjct: 266 GQEELIPEEETAYIALHLISKSVAEQD 292 >UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Firmicutes RepID=A6LXA2_CLOB8 Length = 279 Score = 39.6 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 38/95 (40%), Gaps = 4/95 (4%) Query: 20 KGMMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS- 76 + ++N+++ L + +TH+ R RG EIE D L + + Sbjct: 178 NMIQNILNIVKFHYKLELDEYSLHYERFITHLKFFSQRIFRGNEIEDEDTSLSKIMREKY 237 Query: 77 -SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 ++ ++ + + EF E+ E YL ++ Sbjct: 238 KEAYKCAEKIKKYVKSEFNSELTDEEMMYLAVHIN 272 >UniRef50_C0D9E2 Putative uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9E2_9CLOT Length = 168 Score = 39.6 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 39/96 (40%), Gaps = 4/96 (4%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + + + +++ +++ ++ + +TH+ + R E D+ L ++ Sbjct: 64 VTETVQELIKMIQIHFNMSLDETSLSYQRLITHIRYFVRRLFVNEPAGGGDDLLFEQVKS 123 Query: 76 S--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + V ++ +F E+ E YL+ ++ Sbjct: 124 AYPRSYTCVCKIRDYFRMKFHCEITEEEMTYLMLHI 159 >UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1K5_9CLOT Length = 273 Score = 39.6 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 4/105 (3%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRG-EEIEPLD 66 L ID + +++ E MA H+A A+ R++ G E P Sbjct: 60 LQAVNGIDPVYIEVTARIIEAAEGLLGPIRHDILIAMA-DHIALAVSRAKEGCELPNPFS 118 Query: 67 NELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ A S ++A ++ +++ +E +E++ E Y+ +++G Sbjct: 119 QDIRA--LFSQEYEAALKGRELIRQELGVEISEDEVSYITLHIHG 161 >UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Clostridia RepID=B0K7D9_THEP3 Length = 979 Score = 39.2 bits (90), Expect = 0.036, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 39/99 (39%), Gaps = 4/99 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++ + I + + + + + H+++ R G+ I ++ +L Sbjct: 492 GIVGEKIVEAAEKAYEIAKKSFS-RLEENLFYSLAIHLSATYERILSGKPI--INPQLEN 548 Query: 72 ELAQ-SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + + + + + + +E +E+ E G++ L Sbjct: 549 IIREYPAEYSTAKIMAKQIERELGIELPEEEIGFIAMYL 587 >UniRef50_C7V767 Transcriptional antiterminator n=1 Tax=Enterococcus faecalis CH188 RepID=C7V767_ENTFA Length = 283 Score = 39.2 bits (90), Expect = 0.036, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 2/89 (2%) Query: 26 VNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVV 83 + E + +TH+ + R G+ I D+ L ++AQ Sbjct: 186 IVKYELKMDFDREDVHYQRFITHLKFFVERYYEGKMITENDSSLFEQIAQLYPKALTVAF 245 Query: 84 QLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + +V E YL ++ L Sbjct: 246 NVKDYIEIINDNKVTKEEVAYLTVHINRL 274 >UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKZ6_PEDAC Length = 284 Score = 39.2 bits (90), Expect = 0.037, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMA--MTHMASALMRSRRGEEIEPLDNELLAE--- 72 + ++N+++ ++ +TH+ + R E D +L E Sbjct: 175 DITVLRDLLNIIKYHFNINFDETSINYMRLVTHLQYFIDRLNCHELSTKTDVNVLYEQIR 234 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 ++AV ++ + + K F E+ P E YL+ ++ Sbjct: 235 TIYPEAFRAVQKIDKYISKSFGQEIFPDEYTYLMIHIN 272 >UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLN3_CLOCL Length = 280 Score = 39.2 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 42/99 (42%), Gaps = 7/99 (7%) Query: 22 MMQVVNVLETECHLPVRSEQGTMA--MTHMASALMRSRRGEEIEPLDNELLAELAQS--S 77 + +++ V+E ++ + E + +TH+ A+ R + IE + LL + Sbjct: 184 IQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPIENI---LLDSIKTQLKD 240 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + + + + + F L + E GY+ ++ + + Sbjct: 241 SYMVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIKLRQ 279 >UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDI0_9FIRM Length = 309 Score = 39.2 bits (90), Expect = 0.042, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA- 74 ++ K ++ E ++ + + H+ A+ R G E L N +L E+ Sbjct: 95 EEYFKLSQSIMEKAMEELNISFQDQTIIALTDHICFAVERYETGTE---LPNLVLDEIKT 151 Query: 75 -QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + + + +E +++ E GY+ ++ Sbjct: 152 LYKEEFKIGLWSVKYINQELKIDLPIDEAGYIAMHIIN 189 >UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1A7_ERYRH Length = 289 Score = 39.2 bits (90), Expect = 0.046, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 3/103 (2%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 + + I + + + E + +TH+ A RS + ++ Sbjct: 187 NSAFYAQVITASVDFINKRIPEEFTQNSVGK--ARLITHLKFAFKRSEDNVTLTNPLIDI 244 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 L E ++ L +L +EF +++ E GY+ ++Y L Sbjct: 245 LRE-RYCEAYEISEDLALMLDQEFNIQLPESEIGYIALHIYNL 286 >UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFN4_EXIS2 Length = 259 Score = 38.8 bits (89), Expect = 0.048, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELA--QSSHWQAVVQLHQVLLKEFALEVNPCEE 102 THM L R +G+ + +DN +L+ + + ++ + L +E V E Sbjct: 180 FFTHMKLVLARIEQGQTLHDMDNVILSAVKTRYTDAFRCAENMAAWLEQELQTTVPQSEV 239 Query: 103 GYLLANL 109 GY+ ++ Sbjct: 240 GYMALHV 246 >UniRef50_A2Q6K4 FruR protein n=5 Tax=Actinobacteridae RepID=A2Q6K4_BIFBR Length = 297 Score = 38.8 bits (89), Expect = 0.052, Method: Composition-based stats. Identities = 12/94 (12%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Query: 22 MMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + Q++ V+E+ ++ + +TH+ +R + E++ +++ + S + Sbjct: 180 IQQLLAVIESTYNIKLDEHSVNVGRFITHLRYLFVRIHQHEQLSREPEAIVSSIMSS--Y 237 Query: 80 QAVVQLHQVLLKEFALE----VNPCEEGYLLANL 109 + +++ L + E YL ++ Sbjct: 238 AKASKCARLIASLIELRLDTTLTEDEVAYLTLHV 271 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 38.8 bits (89), Expect = 0.054, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 1/97 (1%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 + V+ + + + + H+A AL R ++ L+ E +EL + Sbjct: 203 IRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAE-QSELIIKKEYTI 261 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 Q+ L KE L E Y+ +L + + + Sbjct: 262 AKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKD 298 >UniRef50_A0ALC5 LicT protein n=38 Tax=Firmicutes RepID=A0ALC5_LISW6 Length = 285 Score = 38.8 bits (89), Expect = 0.058, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 20 KGMMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAE--LAQ 75 + + +++++ + + T +TH+ R R E ++ D+ L + + Sbjct: 178 QIVQDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLRKEIVDSGDDFLYEQVQIKY 237 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 + ++ LL E+ E YL ++Y Sbjct: 238 PEAFNCTKKIDAYLLNTHHTELTRDERVYLTIHIY 272 >UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus RepID=SACT_BACSU Length = 276 Score = 38.8 bits (89), Expect = 0.059, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Query: 22 MMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + +++ ++ + V +TH+ A+ R E + +D E+L + + + Sbjct: 177 IKEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSF 236 Query: 80 QA--VVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++L + L E+ L + E GY+ ++ L Sbjct: 237 AYQCALELAEFLKNEYQLHLPESEAGYITLHVQRL 271 >UniRef50_B1C8U8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8U8_9FIRM Length = 664 Score = 38.8 bits (89), Expect = 0.060, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 41/98 (41%), Gaps = 5/98 (5%) Query: 17 DICKGMMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEE-IEPLDNELLAEL 73 ++ + + + + + + E + H+ + MR + E I P+ +L Sbjct: 299 ELHTTVATFLYKISEQLDISLYDEYSLFEFLIKHLNAMAMRIKNEELLINPIYEQLKE-- 356 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++AV + +++ + L+++ E Y++ ++ Sbjct: 357 KYDYVFKAVKENIRLIEDFYKLKIDKNELSYIVMHICA 394 >UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Bacteria RepID=D0KIH3_PECWW Length = 313 Score = 38.4 bits (88), Expect = 0.061, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 19 CKGMMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--A 74 K + + N+++ H+ + E + +THM + R I D+ + ++ Sbjct: 212 VKMLKDIFNIIQYNFHIVIDKESINYSRFLTHMQFFIQRLLENSLIHSNDDFIFDQVTKE 271 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++ + + ++++ E YL+ ++ + Sbjct: 272 YPDAYKCSRLIKDYIHNLLNIDISNDEMLYLIIHIVRI 309 Score = 38.0 bits (87), Expect = 0.090, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 43/100 (43%), Gaps = 5/100 (5%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + ++ + ++++ + H + + + H++ A+ R R+G I+ N LL E+ Sbjct: 101 VREEYVHIVNKIIDDANRQLHGRLSEQVFFTLIDHISFAIERYRKGISIQ---NRLLYEV 157 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + + ++ LE+ E G + +L Sbjct: 158 KRFYPQEFAIASRALNDINQQMTLELPEEEAGNIAFHLVN 197 >UniRef50_B6FYA9 Putative uncharacterized protein n=3 Tax=Clostridium RepID=B6FYA9_9CLOT Length = 293 Score = 38.4 bits (88), Expect = 0.064, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 39/90 (43%), Gaps = 6/90 (6%) Query: 25 VVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAEL---AQSSHW 79 ++ ++ + + E + +TH+ R GE ++ D ++ AE+ + Sbjct: 195 ILKIVTDTFDIQLDEESLHYSRLITHLKFLSQRIFMGEMLKDSD-DVFAEMIATKYPEEF 253 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + +++ + +++ ++ E YL ++ Sbjct: 254 KCALKIRDYIEEQYNQRISNEELVYLAVHI 283 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 38.4 bits (88), Expect = 0.066, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 31 TECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLL 90 + L + + H+ A+ R + G EI+ E A LAQ +Q+ +++ + + Sbjct: 202 RKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQE--ANLAQEVEYQSALEIVEKIR 259 Query: 91 KEFALEVNPCEEGYLLANLYGLWMAAN 117 ++ + + P E Y+ +L ++ Sbjct: 260 QQMGIVLPPEEAFYIAIHLKNKLVSET 286 >UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWD6_9BACI Length = 287 Score = 38.4 bits (88), Expect = 0.066, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 5/97 (5%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 +++ + + + +E+E + + H+A AL R+ G + N L E Sbjct: 72 NEERLLAVHEAIARIESEMAIRLPDSALFALTQHLALALQRTTDG---TDIQNPFLLETK 128 Query: 75 --QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ Q L+KE L + E G++ ++ Sbjct: 129 WLYRDSYRLAEQAVHFLMKETGLSLPEAEIGFVTLHI 165 >UniRef50_Q045X5 Beta-glucoside operon antiterminator n=6 Tax=Lactobacillus gasseri RepID=Q045X5_LACGA Length = 304 Score = 38.4 bits (88), Expect = 0.070, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 47/108 (43%), Gaps = 4/108 (3%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE--EIEPLDN 67 E +I+ + ++QV+ L +++ M H+ R +G+ + Sbjct: 191 EKNIINIEEMLHIVQVILDQHNIYRLASNNDEYERFMIHLQYLFRRLEQGKKFRSSDITK 250 Query: 68 ELLAEL--AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++ EL + V ++ + L ++F E++ E+ YL+ ++ ++ Sbjct: 251 KVKDELISEYPESFVVVKEIDEQLKQDFQWEISDEEKLYLIVHIQRIY 298 >UniRef50_Q71VY8 Transcription antiterminator, BglG family n=14 Tax=Listeria RepID=Q71VY8_LISMF Length = 281 Score = 38.4 bits (88), Expect = 0.071, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 46/101 (45%), Gaps = 4/101 (3%) Query: 17 DICKGMMQVVNVLETECHLPVRSE--QGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 I + + +++++++ ++ E MTH+ R GE I+ +D L + Sbjct: 176 HIMQLIQEIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGETIDEMDEFLYQTVK 235 Query: 75 QS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +S + ++ + ++ L K + ++ E+ YL ++ L Sbjct: 236 KSRGAIFECIDKIGVFLEKNYQFTMSHSEQFYLALHIERLL 276 >UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=A7GGX3_CLOBL Length = 275 Score = 38.4 bits (88), Expect = 0.073, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Query: 46 MTHMASALMRSRRGEEIEPLDNELLAELAQS--SHWQAVVQLHQVLLKEFALEVNPCEEG 103 +TH+ + R + + I+ NELL + + S + +++ ++ K F +++ E G Sbjct: 207 LTHLNFMIERVKEDKTIK---NELLDSIKEEMKSEFSIAIKVAMLIEKLFEIKIPEDEIG 263 Query: 104 YLLANL 109 Y+ +L Sbjct: 264 YIALHL 269 >UniRef50_A6M2B9 Sigma-54 factor, interaction domain-containing protein n=5 Tax=Clostridia RepID=A6M2B9_CLOB8 Length = 895 Score = 38.4 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +ID+D K + +V+ + + + S T H+ + + R + I + + + Sbjct: 431 IIDEDTLKCIDSIVSHITRKLPVIFDSNLYTAFALHINTLINRINSDKIIINTNLNRIKD 490 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 L S + +++ +++ + E GYL L Sbjct: 491 LYPSE-FAVALEIKEIIENTINKSIPIDEAGYLTLFLI 527 >UniRef50_P15401 Levansucrase and sucrase synthesis operon antiterminator n=2 Tax=Bacillus subtilis group RepID=SACY_BACSU Length = 280 Score = 38.4 bits (88), Expect = 0.079, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 34 HLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS--SHWQAVVQLHQVLLK 91 ++ + +TH+ A+ + GE I LD E++ + + + + + + K Sbjct: 193 NIVEDTISYERLVTHLRFAIQHIKAGESIYELDAEMIDIIKEKFKDAFLCALSIGTFVKK 252 Query: 92 EFALEVNPCEEGYLLANL 109 E+ E E Y+ ++ Sbjct: 253 EYGFEFPEKELCYIAMHI 270 >UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium perfringens RepID=Q0TV06_CLOP1 Length = 282 Score = 38.0 bits (87), Expect = 0.080, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELA--QSSHWQAVVQLHQVLLKEFALEVNPCEE 102 + H++ A+ R ++GE L N L E+ ++A ++ + L + + E Sbjct: 105 LIDHISFAIERMKKGEI---LRNPFLVEIETLYPKEFEAATKMVKKLEDFTGVSIVDDEI 161 Query: 103 GYLLANLYG 111 G++ +++ Sbjct: 162 GFIAMHIHS 170 Score = 38.0 bits (87), Expect = 0.089, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 34 HLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA--ELAQSSHWQAVVQLHQVLLK 91 + S ++H+ A+ R ++ NELL+ +L ++ ++ + + + Sbjct: 201 EVDRTSLSYARFISHLRFAIERLINNTPVK---NELLSIIKLKYPESFKVAEEIGKAINE 257 Query: 92 EFALEVNPCEEGYLLANL 109 +F+LEV E GYL ++ Sbjct: 258 DFSLEVAEDEIGYLALHV 275 >UniRef50_B5F2K0 Sigma-54 factor, interaction domain-containing protein n=1 Tax=Salmonella enterica subsp. enterica serovar Agona str. SL483 RepID=B5F2K0_SALA4 Length = 906 Score = 38.0 bits (87), Expect = 0.080, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI--EPLDNELLAELAQ 75 I +M + L+ + H + H A+ RS R E I L+ E Sbjct: 813 IVPIVMLFLQQLKEQRHFDEFGSNLLNMIVHTCVAIERSVRNETITYNKLNREAY---LM 869 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLL 106 S ++ + +++L + +++N E +++ Sbjct: 870 SELFKIYQKANEILEDKLDVKLNDDELLFII 900 >UniRef50_A0AGN0 Complete genome n=21 Tax=Firmicutes RepID=A0AGN0_LISW6 Length = 938 Score = 38.0 bits (87), Expect = 0.085, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 4/113 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + R N+L +++++I + +E + + H+ S + R + Sbjct: 462 IHNRENILK---IVNEEILNFAEGIEQRIEHQLGKKLNERFLLAFSLHLTSFIKRIESNK 518 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++ + E + Q ++ ++ + F + V E YL + L Sbjct: 519 PLKYTNIENVVN-DQPEAYELSREIKDDIEATFHIRVPNMEVMYLTLLISSLL 570 >UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Actinobacteridae RepID=B3DQG5_BIFLD Length = 279 Score = 38.0 bits (87), Expect = 0.087, Method: Composition-based stats. Identities = 11/94 (11%), Positives = 40/94 (42%), Gaps = 8/94 (8%) Query: 22 MMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + Q++++++ + + S +TH+ +R + +++ ++ + +S + Sbjct: 180 IQQLLDIIDHSYGITLDRSSVNVGRFITHLRYLFVRIHQHQQLTDEPAPVMKVIRES--Y 237 Query: 80 QAVVQLHQVLLKEFALE----VNPCEEGYLLANL 109 A ++ + + L ++ E YL ++ Sbjct: 238 PAALRCARTIASLLELRLDTDISDDETAYLAMHV 271 >UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2Y2_ERYRH Length = 282 Score = 38.0 bits (87), Expect = 0.092, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 1/100 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 I D + +V + + H+ A++RS+ E+ L E + Sbjct: 62 NKIPVDYFEATRAIVEYAHSVLDTSLSDTINVALTDHIYYAVLRSKDDVELPGLFTEEIK 121 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + ++ + K F + + E GYL+ ++ Sbjct: 122 -MYYPDEFKVGAWALNYINKRFEVTLPQDEIGYLVIHIVN 160 >UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF6_9ACTN Length = 287 Score = 38.0 bits (87), Expect = 0.100, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS 76 + +++ E H+ ++ + H+ A+ R+R GE L + +E+ Sbjct: 79 EFFNISKSIMDEAEKRLHIVLKDQVLIALTDHIVFAVERARNGEGFSNL---MFSEVRGL 135 Query: 77 --SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + ++ + + + E ++ ++ Sbjct: 136 YRREYEIGLWGIHLVEEALGIRLPEDEASFIALHILN 172 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P45551 Uncharacterized protein yhfY n=52 Tax=Enterobact... 116 2e-25 UniRef50_A1JKN9 Putative uncharacterized protein n=5 Tax=Yersini... 108 4e-23 UniRef50_A8GJ09 PRD domain protein n=3 Tax=Enterobacteriaceae Re... 108 7e-23 UniRef50_Q7N5F7 Similar to unknown protein YhfY of Escherichia c... 106 2e-22 UniRef50_C4U196 PRD domain protein n=2 Tax=Yersinia RepID=C4U196... 106 3e-22 UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR fa... 102 4e-21 UniRef50_Q0I1W6 Putative uncharacterized protein n=3 Tax=Pasteur... 101 6e-21 UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus ... 101 6e-21 UniRef50_UPI0001794F42 hypothetical protein CLOSPO_02901 n=1 Tax... 98 7e-20 UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metab... 98 8e-20 UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1... 98 9e-20 UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alk... 98 1e-19 UniRef50_Q67S02 Putative transcriptional antiterminator n=1 Tax=... 98 1e-19 UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Th... 97 1e-19 UniRef50_C1I3F9 Predicted protein n=1 Tax=Clostridium sp. 7_2_43... 96 3e-19 UniRef50_P96574 Putative phosphotransferase enzyme IIA component... 96 3e-19 UniRef50_C6AQX2 S-ribosylhomocysteinase n=4 Tax=Pasteurellaceae ... 95 7e-19 UniRef50_C3WF22 Predicted protein n=1 Tax=Fusobacterium mortifer... 95 8e-19 UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 94 1e-18 UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostri... 94 1e-18 UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus ... 94 1e-18 UniRef50_C1I943 BglG family transcriptional antiterminator n=1 T... 94 2e-18 UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR fa... 93 2e-18 UniRef50_UPI0001C35378 PRD domain-containing protein n=1 Tax=Clo... 93 3e-18 UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 ... 92 5e-18 UniRef50_B0K1N4 PRD domain protein n=3 Tax=Thermoanaerobacter Re... 92 7e-18 UniRef50_Q5WK94 Putative uncharacterized protein n=1 Tax=Bacillu... 91 7e-18 UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaeros... 91 8e-18 UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostri... 91 9e-18 UniRef50_P46321 Putative phosphotransferase enzyme IIA component... 91 9e-18 UniRef50_C6P8P3 PRD domain protein n=1 Tax=Thermoanaerobacterium... 91 1e-17 UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerof... 91 1e-17 UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Hal... 89 3e-17 UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 T... 89 5e-17 UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Cl... 88 6e-17 UniRef50_B9CM75 Putative uncharacterized protein n=1 Tax=Atopobi... 88 7e-17 UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostri... 88 7e-17 UniRef50_B9Y6L8 Putative uncharacterized protein n=1 Tax=Holdema... 88 1e-16 UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR fa... 88 1e-16 UniRef50_A6D1D8 Putative uncharacterized protein n=1 Tax=Vibrio ... 87 1e-16 UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Lis... 87 2e-16 UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumil... 87 2e-16 UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=The... 87 2e-16 UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR fa... 86 3e-16 UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Cl... 85 7e-16 UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomon... 84 9e-16 UniRef50_D0GNT1 PRD domain-containing protein n=1 Tax=Leptotrich... 84 2e-15 UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan opero... 83 2e-15 UniRef50_P44003 Uncharacterized protein HI0487 n=15 Tax=Haemophi... 83 2e-15 UniRef50_D1ALX8 PRD domain protein n=1 Tax=Sebaldella termitidis... 83 3e-15 UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collins... 83 4e-15 UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax... 82 4e-15 UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Cl... 82 6e-15 UniRef50_Q9KF98 BH0587 protein n=1 Tax=Bacillus halodurans RepID... 81 9e-15 UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax... 81 1e-14 UniRef50_C7T9M3 Conserved protein n=2 Tax=Lactobacillus RepID=C7... 81 1e-14 UniRef50_Q6LNG7 Putative uncharacterized protein PM1058 n=1 Tax=... 80 2e-14 UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 ... 80 2e-14 UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Ba... 79 3e-14 UniRef50_C9A355 Putative uncharacterized protein n=1 Tax=Enteroc... 79 3e-14 UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=... 79 4e-14 UniRef50_A8U9C7 Putative uncharacterized protein n=1 Tax=Carnoba... 78 7e-14 UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostri... 78 1e-13 UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collins... 78 1e-13 UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 ... 76 5e-13 UniRef50_Q65MQ9 Putative uncharacterized protein n=1 Tax=Bacillu... 75 7e-13 UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) ... 73 2e-12 UniRef50_C1QBY4 PTS system IIA component; transcriptional antite... 73 3e-12 UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=La... 73 3e-12 UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococc... 69 5e-11 UniRef50_C8NIB7 Putative uncharacterized protein n=1 Tax=Granuli... 69 5e-11 UniRef50_D1WYJ0 Transcriptional antiterminator, BglG n=3 Tax=Str... 61 1e-08 UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostri... 59 4e-08 Sequences not found previously or not previously below threshold: UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan opero... 74 1e-12 UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-... 74 2e-12 UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR fa... 73 4e-12 UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8N... 72 6e-12 UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collins... 71 9e-12 UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttle... 71 1e-11 UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_L... 71 1e-11 UniRef50_A6NQL9 Putative uncharacterized protein n=1 Tax=Bactero... 69 4e-11 UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 T... 68 6e-11 UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR fa... 68 7e-11 UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS sy... 65 6e-10 UniRef50_Q63A16 Possible transcriptional antiterminator, bglG fa... 65 6e-10 UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdema... 65 7e-10 UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacteriu... 65 7e-10 UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Pae... 65 8e-10 UniRef50_C7IC29 Transcriptional antiterminator, BglG n=1 Tax=Clo... 64 1e-09 UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS ... 64 1e-09 UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Stre... 64 1e-09 UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium... 64 1e-09 UniRef50_A6M2G4 Sigma-54 factor, interaction domain-containing p... 64 1e-09 UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium ... 64 1e-09 UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostri... 64 2e-09 UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=... 64 2e-09 UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax... 64 2e-09 UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=St... 63 2e-09 UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 ... 63 2e-09 UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collins... 63 3e-09 UniRef50_B0KCX3 PTS system transcriptional activator n=13 Tax=Cl... 63 3e-09 UniRef50_O31644 Putative phosphotransferase enzyme IIA component... 63 3e-09 UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR fa... 63 4e-09 UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collins... 63 4e-09 UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminoc... 63 4e-09 UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Ent... 62 5e-09 UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecali... 62 6e-09 UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibaci... 62 6e-09 UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillacea... 61 8e-09 UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=... 61 8e-09 UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotrans... 61 9e-09 UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli R... 61 9e-09 UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR fa... 61 9e-09 UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Seb... 61 1e-08 UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bac... 61 1e-08 UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Cl... 61 1e-08 UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enteroco... 61 1e-08 UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactoba... 61 1e-08 UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus ... 61 1e-08 UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacte... 61 2e-08 UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collins... 60 2e-08 UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium... 60 2e-08 UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Br... 60 2e-08 UniRef50_A4W4E8 Transcriptional antiterminator n=1 Tax=Streptoco... 60 2e-08 UniRef50_C3RIK3 Predicted protein n=3 Tax=Bacteria RepID=C3RIK3_... 60 2e-08 UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_... 60 2e-08 UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 T... 60 2e-08 UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12... 60 3e-08 UniRef50_B6FWC4 Putative uncharacterized protein n=2 Tax=Clostri... 60 3e-08 UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus Rep... 60 3e-08 UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clo... 60 3e-08 UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria... 59 3e-08 UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=The... 59 3e-08 UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B... 59 4e-08 UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clo... 59 4e-08 UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Cl... 59 4e-08 UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exi... 59 4e-08 UniRef50_A6TMP5 Transcriptional antiterminator, BglG n=1 Tax=Alk... 59 4e-08 UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostri... 59 5e-08 UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriace... 59 6e-08 UniRef50_Q03E27 Transcriptional regulator with AAA-type ATPase d... 59 6e-08 UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillale... 58 7e-08 UniRef50_P15401 Levansucrase and sucrase synthesis operon antite... 58 8e-08 UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Cl... 58 9e-08 UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clo... 58 9e-08 UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ7... 58 9e-08 UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Ba... 58 1e-07 UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Act... 58 1e-07 UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcu... 58 1e-07 UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillacea... 58 1e-07 UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pedioc... 58 1e-07 UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paeniba... 58 1e-07 UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 ... 57 1e-07 UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerot... 57 2e-07 UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipe... 57 2e-07 UniRef50_B1CBZ7 Putative uncharacterized protein n=1 Tax=Anaerof... 57 2e-07 UniRef50_C6PVA3 PTS system transcriptional activator n=1 Tax=Clo... 57 2e-07 UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostri... 57 2e-07 UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12... 57 2e-07 UniRef50_C6PDR4 PTS system transcriptional activator n=1 Tax=The... 57 2e-07 UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=The... 57 2e-07 UniRef50_A6LWC3 Sigma-54 factor, interaction domain-containing p... 56 3e-07 UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax... 56 3e-07 UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdema... 56 3e-07 UniRef50_Q8XP92 Probable transcription antiterminator n=1 Tax=Cl... 56 3e-07 UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Ba... 56 4e-07 UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus... 56 4e-07 UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Ent... 56 4e-07 UniRef50_C6PFM7 PTS system transcriptional activator n=1 Tax=The... 56 5e-07 UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR fa... 56 5e-07 UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillu... 55 6e-07 UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacill... 55 6e-07 UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmi... 55 6e-07 UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collins... 55 7e-07 UniRef50_A6M2B9 Sigma-54 factor, interaction domain-containing p... 55 7e-07 UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR fa... 55 7e-07 UniRef50_UPI0001694F32 transcriptional antiterminator, BglG fami... 55 7e-07 UniRef50_B9Y9G6 Putative uncharacterized protein (Fragment) n=1 ... 55 8e-07 UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leu... 55 8e-07 UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax... 55 9e-07 UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostri... 54 1e-06 UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdema... 54 1e-06 UniRef50_C6Q8D8 PTS system transcriptional activator n=1 Tax=The... 54 1e-06 UniRef50_B9Y4W4 Putative uncharacterized protein n=1 Tax=Holdema... 54 1e-06 UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macroco... 54 1e-06 UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=... 54 1e-06 UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteri... 54 1e-06 UniRef50_A6M218 Sigma-54 factor, interaction domain-containing p... 54 1e-06 UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridial... 54 2e-06 UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Seb... 54 2e-06 UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridi... 54 2e-06 UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Ali... 54 2e-06 UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium... 54 2e-06 UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 T... 54 2e-06 UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes ... 54 2e-06 UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdol... 53 2e-06 UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Seb... 53 2e-06 UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacill... 53 2e-06 UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 T... 53 2e-06 UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostri... 53 3e-06 UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebac... 53 3e-06 UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes... 53 3e-06 UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Fi... 53 3e-06 UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Ent... 53 3e-06 UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) ... 53 3e-06 UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotr... 53 3e-06 UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-bind... 53 4e-06 UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lacto... 53 4e-06 UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exi... 53 4e-06 UniRef50_A0AGN0 Complete genome n=21 Tax=Firmicutes RepID=A0AGN0... 53 4e-06 UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Ent... 53 4e-06 UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococ... 53 4e-06 UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysip... 53 4e-06 UniRef50_A6M341 Sigma-54 factor, interaction domain-containing p... 53 4e-06 UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaeros... 52 5e-06 UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB 52 5e-06 UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Strepto... 52 5e-06 UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 ... 52 5e-06 UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 T... 52 6e-06 UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium... 52 6e-06 UniRef50_A6LPX9 Sigma-54 factor, interaction domain-containing p... 52 6e-06 UniRef50_A4IML7 Regulatory protein n=10 Tax=Firmicutes RepID=A4I... 52 6e-06 UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbi... 52 6e-06 UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus... 52 6e-06 UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphyloc... 52 6e-06 UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-bind... 52 6e-06 UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacte... 52 7e-06 UniRef50_Q184X1 Transcription antiterminator n=6 Tax=Clostridium... 52 7e-06 UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostri... 52 7e-06 UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collins... 52 7e-06 UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconost... 52 8e-06 UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminoc... 51 8e-06 UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysi... 51 8e-06 UniRef50_UPI000196B5EC hypothetical protein CATMIT_00421 n=1 Tax... 51 8e-06 UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_... 51 9e-06 UniRef50_C0Z8L8 Transcriptional regulatory protein n=1 Tax=Brevi... 51 9e-06 UniRef50_Q185K2 Putative sigma-54 interacting transcription anti... 51 9e-06 UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_B... 51 9e-06 UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-bind... 51 1e-05 UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-bind... 51 1e-05 UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Ba... 51 1e-05 UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dic... 51 1e-05 UniRef50_B1CAJ2 Putative uncharacterized protein n=1 Tax=Anaerof... 51 1e-05 UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaeros... 51 1e-05 UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterm... 51 1e-05 UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostr... 51 1e-05 UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria Re... 51 1e-05 UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostri... 51 1e-05 UniRef50_B0MED2 Putative uncharacterized protein n=1 Tax=Anaeros... 51 1e-05 UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Ac... 51 1e-05 >UniRef50_P45551 Uncharacterized protein yhfY n=52 Tax=Enterobacteriaceae RepID=YHFY_ECOLI Length = 120 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 120/120 (100%), Positives = 120/120 (100%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE Sbjct: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV Sbjct: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 >UniRef50_A1JKN9 Putative uncharacterized protein n=5 Tax=Yersinia RepID=A1JKN9_YERE8 Length = 126 Score = 108 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 61/120 (50%), Positives = 88/120 (73%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RLN+LC++GVID+DI +G+ QV+N LE LPV EQG MA+THMA+ALMR+RRGE Sbjct: 5 IDARLNILCQSGVIDQDIGQGLDQVINRLEHFWQLPVHGEQGVMAITHMANALMRTRRGE 64 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 EI L+ +LAE+ QS + +++Q LL F+L+ E GYLLANLYGL+++++ + Sbjct: 65 EIAALNPAILAEIVQSKEIHYIREINQDLLAYFSLKPAENEIGYLLANLYGLYLSSDTPL 124 >UniRef50_A8GJ09 PRD domain protein n=3 Tax=Enterobacteriaceae RepID=A8GJ09_SERP5 Length = 122 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 77/118 (65%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRL +L +A VID ++ GM++VV LE L +R QG M +THMA+AL R+RRGE Sbjct: 1 METRLQILHDAQVIDTEVYIGMLEVVKRLEQHWQLNIRHTQGEMMITHMANALTRARRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 I +D ELL E+ S+ + + +++ LL FA + E GYLLAN++GL++A + Sbjct: 61 IIAAIDPELLDEIEASNVFANIREINSDLLSLFAFAIPDSELGYLLANVFGLYLAQTD 118 >UniRef50_Q7N5F7 Similar to unknown protein YhfY of Escherichia coli n=2 Tax=Enterobacteriaceae RepID=Q7N5F7_PHOLL Length = 118 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 62/118 (52%), Positives = 84/118 (71%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ME RLNLL + VID+DI GM+QVV LE + +PVR+ G + +THMA+ALMRSRRGE Sbjct: 1 MENRLNLLYQGNVIDQDIHDGMLQVVAQLENDWEIPVRNALGEIVITHMANALMRSRRGE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 +I +DNELL E+ QS + + ++ LL F ++++PCEEGYLLANL+ LW A + Sbjct: 61 QISSMDNELLMEVRQSRIFSHLQAINASLLAHFDVQLHPCEEGYLLANLFSLWAAKGQ 118 >UniRef50_C4U196 PRD domain protein n=2 Tax=Yersinia RepID=C4U196_YERKR Length = 152 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 75/119 (63%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 METRL +L +A VID + GM+ V+ LE L +R QG M +THMA+ALMR+ +G+ Sbjct: 32 METRLKILYDAQVIDSAVYFGMLNVLTRLEHHWQLSIRHPQGEMLITHMANALMRASQGQ 91 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 I +D+E+L E+ ++ + + +++ LL F EV E GYLLANLYGL +A E Sbjct: 92 VIPAIDDEILKEIEATAIFANIREINNDLLSLFVFEVPNHELGYLLANLYGLHLAQQTE 150 >UniRef50_C9RTD1 PTS modulated transcriptional regulator, MtlR family n=5 Tax=Geobacillus RepID=C9RTD1_GEOSY Length = 696 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 1/107 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++D+ + Q + ++ + + + H+A A+ R ++GE I D L Sbjct: 200 GLVDRKKLSIIEQQIERVKEKLPFTMADSSYIAFVVHLALAIERIKQGEAIH-FDPRDLQ 258 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 L + ++ L + L + F +++ E GY+ +L G + + Sbjct: 259 ALQATKEYEIARVLAESLERAFGIDIPNEEVGYMTMHLMGAKWRSRQ 305 Score = 51.3 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 9/102 (8%) Query: 21 GMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 Q++ + + + + +++ + H+ AL R G + N LL ++ Q Sbjct: 319 KAQQLIRFVSDKLGVDLSTDRTLYEDLVVHLKPALYRLEHGMGVA---NPLLDQIKQD-- 373 Query: 79 WQAVVQLHQVLLKEF--ALEVNPCEEGYLLANLYGLWMAANE 118 + + + ++ + V E GYL+ + M + Sbjct: 374 YAELFAIVADGARQLFGDIPVPDEEIGYLVLHFAAALMREKK 415 >UniRef50_Q0I1W6 Putative uncharacterized protein n=3 Tax=Pasteurellaceae RepID=Q0I1W6_HAES1 Length = 146 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 64/116 (55%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL L + +ID+DI + + N L + + ++++Q M + H+A AL R +RG Sbjct: 25 IQQRLIFLVQRHLIDEDIMTITLNIRNRLGKKWRVNLKTKQVDMLLIHLAMALGRIKRGY 84 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + L+ + +E+ ++ + +++LHQ LL + E+ + +AN+Y L +A Sbjct: 85 VAKALNPDFFSEIERAVCFTKILKLHQELLTFIPFPIPKEEQSHFIANIYSLSLAQ 140 >UniRef50_C0Z8I8 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8I8_BREBN Length = 701 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G+ID++ + ++ L+ E P+ +TH+A A+ R +GE I D L+ Sbjct: 200 GLIDREKLIKVENALSHLDEELPYPLADSAYLGLVTHLALAMERIEKGEGIH-FDEHTLS 258 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 EL + ++ + + L + F +E+ E GY+ +L G + + + Sbjct: 259 ELNGTPEYEIASNIMERLKQIFQMEIPADEIGYITMHLRGAKLRHSPD 306 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 9/109 (8%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + ++ + + E +P+ ++ +TH+ AL R +R EI N +L + Sbjct: 313 NTELMVITKRFIQACEERLDIPLSNDASLFHGLLTHLEPALYRLQRKMEIR---NPILEQ 369 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + Q + + +L E V E GYL+ +L E Sbjct: 370 IKQNYPELFAVTSEAVHTILPEL--RVPDEEIGYLVMHLGAALERTRHE 416 >UniRef50_UPI0001794F42 hypothetical protein CLOSPO_02901 n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=UPI0001794F42 Length = 117 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 58/113 (51%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL LL + ID+D +++++ + + + + E G M +TH+A AL R ++ E Sbjct: 3 LTLRLKLLKDGAQIDEDTYNNLLKIIKSFKKDFQIELSEENGGMFITHLAVALERIKKKE 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +EP++ + E+ +++ + + L K+ + V E ++L ++ L Sbjct: 63 LVEPIEELIFEEVRNDKNFKKANDILESLEKDINISVPEVERPFILMHIVTLL 115 >UniRef50_B7GJR6 Transcriptional antiterminator of mannitol metabolism n=3 Tax=Bacillaceae RepID=B7GJR6_ANOFW Length = 691 Score = 98.0 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 47/104 (45%), Gaps = 1/104 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++DK + + + ++ + + + H+A A+ R +GE I D + L Sbjct: 200 GLVDKKKLFMIERQIEAMKDDLPFTIADSSYIALVIHLALAIERIMQGEAIH-FDAQHLQ 258 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 ++ + ++ ++ + L + F L + E GY+ +L G + Sbjct: 259 TISMTKEYETAEKIAKRLEEVFHLVIPKEEIGYITMHLMGAKLR 302 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEI-EPLDNELLA 71 +I +++ + + + + + + H+ AL R + I PL ++++ Sbjct: 313 SLEIAMKTQELIRFVSEQIGVDLTDDYPLYEDLIVHLKPALYRIQHHMGITNPLLHKIME 372 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + S + V + + + + V E GYL+ + + + + Sbjct: 373 DY--SELFHVVQRGVRHVFS--DMTVPEEEVGYLVLHFASALLRDKQGI 417 >UniRef50_Q8EN85 Transcriptional antiterminator (BglG family) n=1 Tax=Oceanobacillus iheyensis RepID=Q8EN85_OCEIH Length = 696 Score = 98.0 bits (243), Expect = 9e-20, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++D + + + + + + + + H+A A+ R ++G+ I D+E Sbjct: 199 GLVDAEKLDKIEEQIQRMRNQLPYDLADSAYIGLVVHIALAMERLQKGDIIH-FDDEYKE 257 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ ++ ++ L + F+L + E GY+ +L G + N+ Sbjct: 258 QIKDEQEYKIAAEVIGHLEEAFSLFIPEDEIGYITMHLMGAKLRENQN 305 Score = 42.9 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 9/107 (8%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 DI +++ + E ++ V TH+ A+ R ++ I +N ++ E+ Sbjct: 314 DIAYKAKELIRSVSNEMNIDVTHNNRFLNDLTTHLKPAVYRLKQQMNI---NNPMIDEIK 370 Query: 75 QS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + ++ V + Q + L E GY++ + ++ + + Sbjct: 371 KDYIELFEVVDKAIQHVFP--NLAFPDEEIGYIVLHFAATFLQTDSQ 415 >UniRef50_A6TVY0 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TVY0_ALKMQ Length = 705 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 4/117 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++TR LL +IDK+ + + ++ + E E + + H+A A+ R + E Sbjct: 199 IKTRNRLL---NLIDKETIRTLEGLIYIAEEEMGYKLADSAYVGLIVHLALAIKRIKNNE 255 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 I +D E L EL Q+ + +L L F ++++ E GY+ +L G N Sbjct: 256 II-IMDKEFLNELNQNPEFIIARKLALNLSDFFNIDIHEDEIGYITMHLMGSKNRGN 311 Score = 45.2 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 5/86 (5%) Query: 26 VNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA--QSSHWQAVV 83 + ET + + T + H+ A+ R + +I N LL E+ + Sbjct: 335 IAEAETGSFIGNNEKLLTGLVNHLEPAIKRIKMKMDIR---NPLLQEIKTRYPHLIKVSS 391 Query: 84 QLHQVLLKEFALEVNPCEEGYLLANL 109 + +VL ++ E Y+ +L Sbjct: 392 KCAKVLEDYLGQKMPESEIAYIAMHL 417 >UniRef50_Q67S02 Putative transcriptional antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67S02_SYMTH Length = 125 Score = 97.6 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 2/114 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E RL LL E+G I ++ + ++ +E + V E G M TH+A AL R R G+ Sbjct: 6 LEMRLRLLQESGQISPEVAELTRWILKRVEERYDMTVTEENGAMFTTHLAVALERLRSGQ 65 Query: 61 EIEPLDNELLAELAQ-SSHWQAVVQ-LHQVLLKEFALEVNPCEEGYLLANLYGL 112 I+ + +E LAE+ W V + + + V E GYL A+L L Sbjct: 66 AIDEMVSEGLAEVKAYPEEWAFVNEVVAGEAGRRLGARVPEAEVGYLTAHLITL 119 >UniRef50_B0K3R4 Transcriptional antiterminator, BglG n=12 Tax=Thermoanaerobacterales RepID=B0K3R4_THEPX Length = 692 Score = 97.2 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 1/112 (0%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L +ID D + + + L+++ + + H+A A+ R + GE IE + Sbjct: 193 LRLLNLIDYDTVLKIEKAILKLKSQIDYEIVESSYLGLVVHLALAIKRLQNGETIE-MGE 251 Query: 68 ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + L EL +++ ++ +L + L +E + + E GY+ +L G + + Sbjct: 252 DNLQELKKTNEYKFAKKLAKYLQEELDIPIPEDEIGYVTIHLIGAKYRSTTQ 303 Score = 49.0 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNELLAE 72 DKDI ++ E + ++ +H+ A+ R G +I N LL + Sbjct: 307 DKDIEIIARDMIKEAEKIFDVSFSEDEFLEDGLKSHLVPAVYRLEMGLDIR---NPLLED 363 Query: 73 LA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + ++ ++ VL K+ +++ E GY+ + E Sbjct: 364 IKTKYPLLFEKSNRVCDVLRKKLNMDIPEDEVGYIAMHFGAALERKKE 411 >UniRef50_C1I3F9 Predicted protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I3F9_9CLOT Length = 129 Score = 96.4 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 57/112 (50%), Gaps = 1/112 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL++L +AG + K+ ++QV+N E + + + + +M +TH+ SAL R Sbjct: 18 LTLRLDILRDAGQLSKENYNKIIQVINYFEEKRGVKLLEDNASMFITHLCSALGRIEENN 77 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + LD+ + L ++ ++ +++ + L E+ E +++ ++ L Sbjct: 78 LVNKLDDVVAQSLKENENYDEALKVAKDLEAVLG-EIPDSELDFIVMHVCTL 128 >UniRef50_P96574 Putative phosphotransferase enzyme IIA component n=6 Tax=Bacillus RepID=MTLR_BACSU Length = 694 Score = 96.0 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 GV+ K M +++ L+ + + + H+ A+ R + GE I ++ L Sbjct: 194 GVVSKGELLKMERILFQLKEKIAFSLSDSSYIALVVHLTYAIERIKLGETIT-MEQNELE 252 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 EL + + + +++ L + F + + E GY+ +L E Sbjct: 253 ELMNAKEYSSALEIAGELERAFGVTIPEAEVGYITIHLRSANRKYKTE 300 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 43/114 (37%), Gaps = 7/114 (6%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRS--EQGTMAMTHMASALMRSRRGEEIEPLD 66 +A I+ + +++ + + + + + H+ A+ R + E IE + Sbjct: 301 YKAQEIELETALQTKRLIAFISDKIRMDLTKNYSLYEGLIAHLEPAVSRIK--ENIEIYN 358 Query: 67 NELLAELAQSSHWQAVVQLHQVLLKEF-ALEVNPCEEGYLLANLYGLWMAANEE 119 + E + ++ + + + + K F + + E +++ + EE Sbjct: 359 P--MKEQIKRDYFLLYMAIEEGVEKYFPGMSFSDDEIAFIVLHFGSALEIKKEE 410 >UniRef50_C6AQX2 S-ribosylhomocysteinase n=4 Tax=Pasteurellaceae RepID=C6AQX2_AGGAN Length = 126 Score = 94.9 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 61/116 (52%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL +ID+ I ++ V L+ + V +EQ M + H+ASAL R +RG Sbjct: 3 IQQRLWAFQMRELIDEHIVDTVLNVRQHLQRHWQVDVETEQVKMMLVHIASALGRIKRGH 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 PL + LAE+ + + V+ +HQ +L+ L + E+ Y LAN+YGL + Sbjct: 63 RASPLYADFLAEIQSAVIFPQVLIIHQYVLELMPLSIPEEEQTYFLANVYGLVLDQ 118 >UniRef50_C3WF22 Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WF22_FUSMR Length = 120 Score = 94.9 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 60/113 (53%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++TRL +LC G I + + M+ V+ + + + + + E G M TH++ A+ R + E Sbjct: 3 LQTRLEILCSTGTISNETREVMLNVIKMFQEKHQITLTEENGAMMTTHLSMAITRVKNNE 62 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++ ++ E+ E+ +S + ++++ L +++ E+ Y+L N+ + Sbjct: 63 PVKVINEEVYQEILESEFLEKAQEIYKDLESVLDVKLPEDEKKYMLVNICTIL 115 >UniRef50_A7ZA83 LicR n=3 Tax=Bacillus RepID=A7ZA83_BACA2 Length = 651 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 2/116 (1%) Query: 6 NLLCE-AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 +LL E AG++ KD + + +P+ + H+A A R R + Sbjct: 176 DLLSEKAGILPKDDIHVIRTAIMKQVRNHKIPLSFFGLNNLIIHIAIACKRIRTENYVSL 235 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + + L ++ + +Q+ + + L ++ E Y+ +L G A ++ Sbjct: 236 IPED-LHDIKLETEYQSAEAIVKELESALSVTFPEQETAYIAIHLLGTKRMAQSQL 290 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 5/112 (4%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEI-EPLDN 67 +ID + + ++ +E E L + + H+ A+ R+R G + P+ + Sbjct: 296 TRLIDGETSRLTEAMIEAIERELKLGITDDNELKAGLALHIKPAINRNRYGMNLRNPMLS 355 Query: 68 ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + ++A V V+ ++ ++++ E GYL + E Sbjct: 356 AIKENY--PLAFEAGVIAGIVIKEQTGIDIHENEIGYLALHFGAAIERRKTE 405 >UniRef50_B0A809 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A809_9CLOT Length = 721 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +IDK I K + ++ + +L + + H++ A+ R R GE I ++ ++L Sbjct: 208 NLIDKSIIKKVENSLSETIKDINLKISDSAFIGLVVHISLAVQRLRNGETIS-MEQDVLN 266 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 EL ++ ++ Q + +EF ++V E GY+ +L G + + Sbjct: 267 ELKSIEQFKTATKIAQQIEEEFDIKVPIDEIGYITMHLRGSKLRLETK 314 Score = 44.8 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 42/99 (42%), Gaps = 6/99 (6%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEI-EPLDNELLA 71 D ++ +++ + E +++ + HMA +L R + G +I PL N++ Sbjct: 322 DVELMNIAKRLIELATDEFGFDFSTDKKLLNDLVNHMAPSLCRIKMGMDIRNPLLNQIKT 381 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALE-VNPCEEGYLLANL 109 E + V + ++ ++ ++ + E YL + Sbjct: 382 EYK--DIYDGVANIIYIIKEKLDIDNIPESEIAYLAMHF 418 >UniRef50_Q9K679 Transcriptional antiterminator n=1 Tax=Bacillus halodurans RepID=Q9K679_BACHD Length = 700 Score = 94.1 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +I+ ++ + + +V+ + P+ + H+ A+ R R+GE+IE +D L+ Sbjct: 197 HLINLELVRNIQEVLADFRKQMVEPMADRAYIGLIVHLTLAIERIRQGEKIE-IDPSYLS 255 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 +L ++ L + L ++ + + E GY+ ++ G E Sbjct: 256 KLKMDKEFELAADLARRLEQKLGMNIPEAEVGYMTMHIRGAKAHIETE 303 Score = 41.3 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 4/100 (4%) Query: 21 GMMQVVNVLETECHLPVRSEQ-GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + +++ +E H+ + + H+ AL R R +I N LL ++ Q Sbjct: 316 RVKALIHEVEKSLHVQFQDPSLFQGLVAHLKPALYRIREKMKI---YNPLLEKIKQDYEE 372 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 V + + + E G+L+ + + Sbjct: 373 LFHVVQVKGNKVFEPITIPEEEAGFLVMHFGSALERLKRK 412 >UniRef50_C1I943 BglG family transcriptional antiterminator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I943_9CLOT Length = 715 Score = 93.7 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E RL IDK I K + ++V+ LE E + + + H++ A+ R + E Sbjct: 210 IENRLL-----NFIDKSIIKAIEEIVSGLEKENDIRLVDSAYIGLVVHLSLAIQRIKNKE 264 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 I+ +D ++L ELA+ ++ L + + +F +E+ E GY+ +L G + N Sbjct: 265 NIK-IDPDVLEELAKLPEFEIGKMLVRNIESKFNIEIPVDEIGYITMHLKGAKLRLNS 321 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 4/114 (3%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLD 66 E + + DI + +V V+E E ++ ++ ++ H+ A+ R + I Sbjct: 325 LEEDIANLDIKRIGKNIVEVVEKELNIFLKDDERLLKDLTNHLVPAISRLKMKLNIRNPL 384 Query: 67 NELLAELAQSSHWQAVVQLHQVLLKEFAL-EVNPCEEGYLLANLYGLWMAANEE 119 + E + A + ++L + E+ E Y+ ++ E Sbjct: 385 LNNIKE-KYPMEYNATKKACEILKLNTKVDEIPDSEIAYITMHIAAAIYKKGLE 437 >UniRef50_C5D9V5 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5D9V5_GEOSW Length = 661 Score = 93.3 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 47/107 (43%), Gaps = 1/107 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 V+ + + + ++ P+ + H+A A+ R ++G I +D L Sbjct: 187 DVLKPYELTLIEKEIRKMDEWLEFPLTDQSVISLTIHIAIAIKRIKKGHRIH-IDTNQLQ 245 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 EL + ++ QL + + + A+++ E GY+ +L G + ++ Sbjct: 246 ELQKKPEYKLAEQLAKQIEQWVAVKIPKAEIGYITLHLLGARLRYDQ 292 Score = 46.7 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 7/103 (6%) Query: 15 DKDICKGMMQVVNV--LETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 D + + + ++++ L T+ L E H S L R R G ++ N LL + Sbjct: 307 DYEALQIVKELIHDISLCTDERLRKDKELLLGLTIHFHSTLNRLRNGLAVK---NPLLKD 363 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + Q ++ V+ L + K+ + + E Y++ ++ Sbjct: 364 IKQMYRYSFEMVLSLIPKIEKKANVAIPEDEIAYIVLHIQAAL 406 >UniRef50_UPI0001C35378 PRD domain-containing protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C35378 Length = 120 Score = 92.6 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 1/114 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL +L +GVI + I V +L + ++ M +TH+A A R G+ Sbjct: 7 LNQRLEILLNSGVISQRISDYCKTAVKLLIKQ-KPEADGDRAAMFITHLAMAGQRILEGK 65 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 E +PLD ++L + Q + + +L + LE E+ +L +L L+M Sbjct: 66 EEKPLDGQILESVKQEPAYSKALDFLTYMLNQTDLEFPDTEKDFLTVHLCNLFM 119 >UniRef50_C9KJT4 Transcriptional antiterminator, BglG family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJT4_9FIRM Length = 705 Score = 91.8 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++DK + + Q+V+ +E+ + + H++ A+ R R+ E+I +D LA Sbjct: 200 LVDKQMIHDLEQLVHEVESGLPHHLSDTAFIGLVVHLSLAIQRMRKKEDIH-IDTATLAA 258 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 L + ++ +L + + +F EV E GY+ +L G Sbjct: 259 LRKRREYRMAKELARRITAQFQTEVPEDEIGYITMHLMGAR 299 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 5/89 (5%) Query: 27 NVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVVQ 84 ET L E + H+ ++ R R +I N LL E+ + + Sbjct: 329 AQQETGRKLLDNKELFLGLVNHLGPSISRLRMHMDIR---NPLLEEMRSAYPELMELAGK 385 Query: 85 LHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + +E + E Y+ +L Sbjct: 386 AVKPMEQELGEALPEAEVAYIAMHLGAAL 414 >UniRef50_B0K1N4 PRD domain protein n=3 Tax=Thermoanaerobacter RepID=B0K1N4_THEPX Length = 124 Score = 91.8 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 1/112 (0%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R++LL + VID D K + ++ L + E M +TH+A ++ R + E++ Sbjct: 7 NRIDLLVQGNVIDFDTGKAIKKIDEELRVNYEICAEDEHYEMFITHLAMSIKRLKEEEKL 66 Query: 63 EP-LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 E +D+EL E+ ++ + + Q + +++ E+ ++L +L L Sbjct: 67 ESTIDDELFNEVKNCPNYYRALGILQNIEDRIEIKLPESEKRFVLLHLCNLL 118 >UniRef50_Q5WK94 Putative uncharacterized protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WK94_BACSK Length = 115 Score = 91.4 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 4/117 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + TRL +L EAG I + QVV+ + E M +TH+A AL R + E Sbjct: 3 LYTRLQILKEAGTITDKAYRVTTQVVDEQVPDH----LHENYAMLVTHLAMALTRIEQNE 58 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + + ++ E+ S H A + + + + E+ +L + + + + Sbjct: 59 ALTGPGDAVMEEVLASPHLPAAKEAVEKIESLVGEPLPKEEQQFLYMHFVSTFSSVS 115 >UniRef50_B0MAI9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAI9_9FIRM Length = 696 Score = 91.4 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +++++I +++++ E E + + H+ A+ R G+ I ++ ELL Sbjct: 206 DLLNEEILDKVIKILKKCEDEFLSRITRHSYIGLVIHLVIAIERLLSGKTIT-MEEELLR 264 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 L + +++ +L +EF +EV E Y+ +L G M E Sbjct: 265 ALKEDPYYKKAKELTAYFEEEFHIEVPESESAYVFMHLKGARMKYAVE 312 >UniRef50_C0D786 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D786_9CLOT Length = 673 Score = 91.4 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 6 NLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 L E ++ + + V + + V S + H+ A+ R + + PL Sbjct: 199 EALAEGEAEHQENMTRVARCVAEVIDTENFTVNSVAYQNLIVHICIAVQRIQENCYV-PL 257 Query: 66 DNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 D E + +S ++ ++ + L + FA+ E Y+ +L G Sbjct: 258 DEERQERIRRSKEYRIAQKITERLNQSFAIRFPDQEIAYIAIHLAG 303 >UniRef50_P46321 Putative phosphotransferase enzyme IIA component n=2 Tax=Bacillus RepID=LICR_BACSU Length = 641 Score = 91.0 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 46/119 (38%), Gaps = 2/119 (1%) Query: 2 ETRLNLLCE-AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ET +++L E A ++ K+ + + + +P+ + + H+A A R R Sbjct: 172 ETEIDVLNEKADILPKEEIEIIRSAILKKMKNDRIPLSNMGLNNLIIHIAIACKRIRTEN 231 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + + + +QA + + L + ++ E Y+ +L G + Sbjct: 232 YVSLFPKD-MDHILHQKEYQAAEAIVKELESKLSVTFPKDETAYITMHLLGTKRMTQSQ 289 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 48/110 (43%), Gaps = 7/110 (6%) Query: 14 IDKDICKGMMQVVNVLETECHL-PVRSEQG-TMAMTHMASALMRSRRGEEIEPLDNELLA 71 I+++ + + ++ ++ E L + ++ HM A+ R+R G L N +LA Sbjct: 297 IEEETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRYGMN---LRNPMLA 353 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + ++A + V+ ++ +E++ E GYL + E Sbjct: 354 AIKEHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHFGAAIERKKTE 403 >UniRef50_C6P8P3 PRD domain protein n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P8P3_CLOTS Length = 124 Score = 91.0 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL++L + ID++ +++ ++L++ + +EQ M +TH+A + R + Sbjct: 5 ITMRLDILLKGNAIDRETLSMTLKIDDLLKSYDTIYRNNEQYEMFITHIAMMIQRVKNNN 64 Query: 61 EI-EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + E LD+++ E+ + ++ V + + + + E +++ +L L Sbjct: 65 YVNEVLDDDIYDEIKKCLSYKEAVDILEKIEGISNTILPESERRFIILHLCNLL 118 >UniRef50_B1C5P5 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5P5_9FIRM Length = 720 Score = 90.6 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 1/106 (0%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L + + D++ ++ ++ LE + H+A A+ R ++G +I + + Sbjct: 202 LYKEALFDEEDLYKIIDSISYLEDLLETKFDDSSYVSLLIHLAIAMKRLKKGNKI-LMSD 260 Query: 68 ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 E L +L + + L F +++ E GY+ +L G Sbjct: 261 EQLEQLKNEDEYSVSKSFAKYLNTIFDIDIPDEEIGYITIHLMGAR 306 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 47/102 (46%), Gaps = 10/102 (9%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAM----THMASALMRSRRGEEIEPLDNELL 70 DK++ + ++++++ ++ + + ++ + H+ A+ R + IE N +L Sbjct: 315 DKELREVVIKIIDNVQKILNKSIDNKYIDDLIKDLTVHLKPAISRLKNSLMIE---NPIL 371 Query: 71 AELAQS--SHWQAVVQLHQVLLKEFALE-VNPCEEGYLLANL 109 + + AV + ++ +++ +E + E Y+ ++ Sbjct: 372 GTIKGKYMDIFSAVEKSCFIIKEKYYIENIPDDEIAYITMHI 413 >UniRef50_B8CZR0 Transcriptional antiterminator, BglG n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZR0_HALOH Length = 741 Score = 89.5 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 46/105 (43%), Gaps = 1/105 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++ + V++ E + E + H+A A+ R G++I+ L E L Sbjct: 205 LVSGIDLTKIESVISFAEKQLGFQFADEAYASLLVHLALAISRLLEGKDIQ-LPEERLKV 263 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + +S ++ ++ +++ + F + + E GY+ +L G + Sbjct: 264 IKKSDEYKIAKKIGKIMEQIFDISIPDSEIGYVTLHLMGAKLWQK 308 Score = 44.0 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +D+++ ++V V E + + + H+ + R + PL N LL Sbjct: 322 LDQELIILTKEMVKVAEDYLGVKLIDDTQLIIGLALHLKPTINRIK---YDLPLKNPLLL 378 Query: 72 ELAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 ++ ++A + ++L + ++ E GY+ +L + Sbjct: 379 DVKSRYGEIFKAAKRAAKILQSKLQKSISSDEIGYITLHLGAALERSKS 427 >UniRef50_Q5WDU8 BglG family transcriptional antiterminator n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WDU8_BACSK Length = 688 Score = 88.7 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 45/107 (42%), Gaps = 1/107 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +D + + + + ++ + + + + H A+ R ++GE+I +D L Sbjct: 192 HFVDLETIRLVQSTIQRVKEKHFDDMADQSFIALVVHATLAIERIKQGEQIR-MDAGQLE 250 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 L + +L + L + F + + E GYL+ +L G + + Sbjct: 251 ALHKEDSLPVAQELAEALAQTFQITIPEAEIGYLVMHLRGARIGHIQ 297 Score = 47.5 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 4/107 (3%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ-GTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + ++ + Q + +E + + + + H+ AL R R+G +I N LL ++ Sbjct: 305 NAELAGRLKQFIAGMEQDLSVSLAEPSLFQGLLAHLKPALYRVRQGMKIH---NPLLEKV 361 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 V Q L++ E G+L + V Sbjct: 362 KADYAALFAVTAKQASKAFAPLKLPEAEIGFLTLHFGAALERRKRSV 408 >UniRef50_C9XLB5 Putative transcription antiterminator n=8 Tax=Clostridium difficile RepID=C9XLB5_CLODC Length = 712 Score = 88.3 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 53/118 (44%), Gaps = 6/118 (5%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E RL L + +I + + + ++ + + + H++ AL R + GE Sbjct: 207 ENRLLNLMDRCII-----RKVEATLTKKLSDLDVNLADSAYIGLVVHISLALQRIKNGEN 261 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 I +D E L EL+ + ++ ++ + + +F +++ E GY+ ++ G ++ Sbjct: 262 IT-MDKEFLKELSITEEFKLAKEIVKGMETDFNMDIPVDEVGYITMHIRGAKQRSSSN 318 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 46/106 (43%), Gaps = 8/106 (7%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNEL 69 + D +I + +++++ E E + +++++ H+ ++ R G EI N L Sbjct: 323 NLDDIEIMEITNKMIDLAEDEFKISLKNDERLFKDLANHLGPSINRLNMGLEIR---NPL 379 Query: 70 LAELAQSSHWQA--VVQLHQVLLKEFAL-EVNPCEEGYLLANLYGL 112 L E+ + V ++ +++ + + + E GY+ + Sbjct: 380 LDEIKSKYSYAYDGVEKISRIIKDKLNINSIPESEIGYIAMHFASA 425 >UniRef50_B9CM75 Putative uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM75_9ACTN Length = 120 Score = 88.3 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 32/115 (27%), Positives = 62/115 (53%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R+ +L +AG +D++ + + VV ++E EC E + +TH+A+AL R+ EEI Sbjct: 6 ERIEILKQAGFVDENDAESLKNVVALIEHECGPAESDEHIGIIITHIAAALKRNVEEEEI 65 Query: 63 EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 P++ + L E+ S + ++ + FA ++ E G++L ++ GL +A Sbjct: 66 APINQQALEEVYASPVFPKANRIANDISDMFAERLSKDEFGFVLVHIAGLLVAHQ 120 >UniRef50_B6FZM9 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FZM9_9CLOT Length = 697 Score = 88.3 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++D DI K ++ + L E + + H+ A+ R E IEP D+ L + Sbjct: 206 LLDTDIMKRVISCLINLNNEQIANLTDSSYAGLVIHITIAINRIMHNEIIEP-DSRLDED 264 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + V + L KEF +E+ E Y+ ++ M Sbjct: 265 IEHDRDYSLAVIIASSLEKEFDIEIPEIEVTYICLHIRASKMQNTSN 311 Score = 44.8 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 31/84 (36%), Gaps = 5/84 (5%) Query: 38 RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFAL 95 + HM L+R G I N LL ++ ++ ++ +L ++ L Sbjct: 343 DDAFIDGLIAHMQPTLVRLTNGLAIR---NPLLDQIKSDYPDIFKKCKKVTAMLEEKLNL 399 Query: 96 EVNPCEEGYLLANLYGLWMAANEE 119 +V E G+L + + + Sbjct: 400 KVPESETGFLAVHFGAAVVRLEQN 423 >UniRef50_B9Y6L8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6L8_9FIRM Length = 124 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 57/117 (48%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 RLNL E G+I D + ++ + + + H+ ++ E + H+ +A RS GEE Sbjct: 4 TERLNLYLEGGMIQPDDVADVQAIITMFDQKYHIVLQEENADTFIAHLCAAFGRSATGEE 63 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 +EPL E+ AEL + +Q+ + ++ +NP E+ Y L ++ L E Sbjct: 64 VEPLPPEVKAELEGLDSYPQSLQMLKDVMAATRNRLNPTEQDYALLHINNLIARLAE 120 >UniRef50_C1PAW0 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Bacillaceae RepID=C1PAW0_BACCO Length = 639 Score = 87.6 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 2/109 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +ID ++ K + +V+ + + + TH+A A R + G IE L + L+ Sbjct: 187 QLIDPELFKKIKEVIVQKVNKYKIEISDISLENLATHIAIACRRIQEGFVIEELADVLVD 246 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + ++ + + +L E Y++ +L G + +E+ Sbjct: 247 D--HPFEKIVANEIIKEVEDFTSLTFPETEIDYIIVHLLGTKLLHKKEL 293 Score = 40.2 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 3/83 (3%) Query: 28 VLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLAELAQSSHWQAVVQLH 86 E E H+ A+ R R I PL N++ + ++ + Sbjct: 314 KAELNWDFRQDREFIQALTLHIRPAMNRLRYKMNIRNPLLNDIKK--KYPAAFEGAIIAS 371 Query: 87 QVLLKEFALEVNPCEEGYLLANL 109 + + + +EV E Y+ ++ Sbjct: 372 KCIEEYLRMEVVEDEIAYIALHI 394 >UniRef50_A6D1D8 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D1D8_9VIBR Length = 119 Score = 87.2 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 2/119 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 M+ R++LL E VI + M+ V +L E ++ SEQ MAMTH A A+ R + Sbjct: 1 MKQRMSLLLEHNVISQIAFDATMRAVGILMIEWNVKEDSEQFQMAMTHFARAIDRVLQSN 60 Query: 61 EI-EPLDNELLAELAQSSHWQAVVQLHQVLLKEFAL-EVNPCEEGYLLANLYGLWMAAN 117 I E LD+E+L E+ + +V ++ L + E+ E +LL+NLY + ++ + Sbjct: 61 PIVEGLDSEILKEMQDDDVFSDIVSMNNQLCSASGVPEMPETEISFLLSNLYAIKLSVS 119 >UniRef50_Q723N6 PRD/PTS system IIA 2 domain protein n=24 Tax=Listeria RepID=Q723N6_LISMF Length = 653 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 G+ ++ K ++ +V + H+A A+ R R GE IE ++++ + Sbjct: 200 TGIFPEEGLKEIIAIVQAFSERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPM 259 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++ S L +L +++ E GY+ +L + ++E+ Sbjct: 260 KDVFDSQR-NNTEILVSMLEDRLDIKIPAFEVGYIQLHLTAAYNQQHDEL 308 Score = 39.4 bits (91), Expect = 0.036, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEE 102 THM SA+ R + G N L+++ Q ++ + +++ ++VN E Sbjct: 340 LTTHMKSAINRLKLGMH---FKNPYLSKIKQNFPQAFEEALYFKAKFEQKYDVQVNEDET 396 Query: 103 GYLLANL 109 Y+ + Sbjct: 397 AYIALHF 403 >UniRef50_A8FIW8 Transcriptional regulator n=2 Tax=Bacillus pumilus RepID=A8FIW8_BACP2 Length = 652 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 + ++ ++ + + +V L + + +TH+A A R + + + Sbjct: 179 NSTLLPEETYQFIQGIVRSRTKASGLYLSEIGLSNLVTHIAIACKRIEEKKIVM-MPETE 237 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 L E+ +Q Q+ + + +E E Y+ +L G M Sbjct: 238 LKEIQVQPVFQVAQQMAEDIRHVLGIEFPLSEMAYIAIHLMGAKMM 283 Score = 47.9 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Query: 12 GVIDKDICKGMMQVVNVLETE--CHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 ++++D + + Q++ +E ++ E H+ SA+ R R G I N Sbjct: 294 HLLEEDHFRFIHQLLAYVEEHMSLNIQFDKELIVGLSLHLRSAIHRFRYGMNIR---NPY 350 Query: 70 LAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 L ++ + ++A V + + L ++ +E++ E GYL ++ Sbjct: 351 LTDIKRHYPIAFEAGVYMGRWLKEKEGIEIHEDEIGYLALHI 392 >UniRef50_B0KCF7 Transcriptional antiterminator, BglG n=8 Tax=Thermoanaerobacter RepID=B0KCF7_THEP3 Length = 652 Score = 86.8 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 K + ++V+ E++ E + H+A ++ R + ++++ L +L L Q Sbjct: 201 DYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLKHKKDVK-LSKAVLNNLKQKD 259 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + Q+ + + +F + + E GY++ ++ G M N+ Sbjct: 260 EYVIAQQMAKEIEAKFNVVLPESEIGYIVLHIIGTKMQQNK 300 Score = 38.6 bits (89), Expect = 0.057, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 7/102 (6%) Query: 23 MQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSH 78 +++N+ E L + +++ + H+ + R + G L N LL ++ + Sbjct: 322 KEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLT---LRNPLLNDIKENYPEI 378 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + V K +V E GY+ +L A + + Sbjct: 379 YGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKKPL 420 >UniRef50_C1PBK9 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PBK9_BACCO Length = 620 Score = 86.4 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 2/101 (1%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ++D+ + + Q++ + ++ + + TH+ A R G IEPL Sbjct: 175 FNQDLFQKVKQILIRIISKYRIRFSDIELQNLATHITLACKRIEDGFTIEPLPFHFKESY 234 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + ++ + K + P E Y+L +L G + Sbjct: 235 TFER--KVAKEITGEVEKSVGIPFPPAEIDYILVHLLGTKL 273 Score = 45.2 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRS--EQGTMAMTHMASALMRSRR 58 + T+L A + +I + +++ L+T+ + E H+ ++L R + Sbjct: 269 LGTKLISKHVARQVSDEIDDIVNAILHELKTQFRWDFSNDKEFRNGLTLHLHTSLNRMKY 328 Query: 59 GEEIEPLDNELLAELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 I N LL E+ ++ V + + +VN E YL ++ Sbjct: 329 KMHIR---NPLLNEMKTKFPIAFEGAVAAGECIEAVIHKKVNEDEISYLAIHIA 379 >UniRef50_B0K247 Transcriptional antiterminator, BglG n=13 Tax=Clostridia RepID=B0K247_THEPX Length = 705 Score = 84.9 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 1/105 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + + + + + + E E + + H+A A+ R + G++I + E L Sbjct: 207 LFEDIDIPYIEECIQIAERELETVFSDAAFSGLVIHIAIAIKRIQLGKDI-IMPKEELKA 265 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 L + + + ++L F + + E GY+ +L G ++ Sbjct: 266 LEITKEFAVASNIAKMLEDHFKVSIPLDEIGYITVHLLGSNVSKT 310 Score = 41.7 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 7/92 (7%) Query: 22 MMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS--S 77 +++ + + H + ++ + H+ + R + G L N +L E+ + Sbjct: 325 TEKIITNVTNKIHQDLSGDRQLFEGLLDHLRPTVYRLKHG---LKLKNPILDEIKANYKE 381 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ V + + L +N E GY + Sbjct: 382 LFEIVKESLKPLEDYTGKALNDEEIGYFTIHF 413 >UniRef50_C4V0J7 MtlR transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0J7_9FIRM Length = 708 Score = 84.5 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G++D + + V + ++P + H+A A+ R ++G+ I +D L Sbjct: 218 GLVDPAQIRRIDDAVAAETQDRNIP--DSARVGLVVHLALAVRRLQQGDTI-AMDAGTLE 274 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 EL Q+ + + + + F++ + E GY+ +L G Sbjct: 275 ELRQTEEFSVAETIAARMGEVFSISIPAAEIGYITMHLLGAR 316 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 31/97 (31%), Gaps = 3/97 (3%) Query: 19 CKGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS 76 + ++ + P+ T + H+A AL R + +I + E Sbjct: 333 VQIAQSIMRRASEKSGAPLMRSRTLLTGLVNHLAPALHRLKLHMDIRNPLLAQMEE-EHP 391 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + ++ +E + V E Y+ ++ Sbjct: 392 ELMEIARHAIPMMEEEAGMPVPNDEVAYIAIHIGAAL 428 >UniRef50_D0GNT1 PRD domain-containing protein n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GNT1_9FUSO Length = 120 Score = 83.7 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 62/113 (54%), Gaps = 1/113 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL++L + VID++I ++ ++ L+ + + + E G M +TH++ AL R ++ E Sbjct: 4 LKFRLDILKNSEVIDEEIYNKVISLIEHLDKKWEITLTEENGAMFITHLSMALKRIKQNE 63 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALE-VNPCEEGYLLANLYGL 112 + +D + E+ S + ++++ + K +E + E+ Y+L NL L Sbjct: 64 NVNNIDKTVFEEVMVSDKLDKIEEIYEDIEKNIFIEKLPEEEKKYILVNLLLL 116 >UniRef50_Q8EMS7 Transcriptional antiterminator of lichenan operon n=1 Tax=Oceanobacillus iheyensis RepID=Q8EMS7_OCEIH Length = 648 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 38/110 (34%), Gaps = 2/110 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE--PLDNELL 70 + + ++ + + H+A A++R R G I+ E + Sbjct: 188 TLPDQQMSMIKNIIIQQLDSHQMTLSDIAIHNLFIHIAIAVLRIRDGHPIDFNAAHREEM 247 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++ + + ++ + K+ L E Y+ +L G M + + Sbjct: 248 QDMKDTKAYFVAEKIVEDTEKQLHLSFPKTETTYVALHLLGTKMVGSTNI 297 Score = 43.3 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 5/100 (5%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVR--SEQGTMAMTHMASALMRSRRGEEI-EPLDNEL 69 ++D I K +M + +E E HL + +E H+ A+ R + G I P+ + Sbjct: 305 ILDPSIYKLIMLSLEKIEEEMHLGISQDTELMISLGMHLKPAMNRYKYGMNIRNPMLTHI 364 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 +QA V V+ ++ + ++ E GYL ++ Sbjct: 365 KKNY--PLAFQAAVYAGVVIEEKTDITIDENEIGYLALHI 402 >UniRef50_P44003 Uncharacterized protein HI0487 n=15 Tax=Haemophilus influenzae RepID=Y487_HAEIN Length = 125 Score = 83.3 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 51/106 (48%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 I++ I + ++ + L V + Q + H+A +L R RG + L +E+L E Sbjct: 15 QINQSIIDVIFRLRDRLAHYWQADVNTPQVDFMLLHIACSLGRIERGGCVSSLYSEMLEE 74 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + + + V+ +HQ LLK + E+ Y LAN++ L + + Sbjct: 75 MQSAVIFPQVLAIHQDLLKLMPFSIPEAEQTYFLANIHSLVLEQKQ 120 >UniRef50_D1ALX8 PRD domain protein n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALX8_SEBTE Length = 116 Score = 82.9 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 62/111 (55%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 RL++L EA +ID++ + + +++N + E L + +E G M +TH++ A+MR + E Sbjct: 3 TERLDILVEAELIDQETYEKVKRIMNEVSEEFTLDLSTESGQMFITHVSMAIMRIKNNEA 62 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++N + E+ +S +++ ++ +++ E+ E+ YL+ N L Sbjct: 63 TTDVENAIFEEIKESENFENALRFAEIIENIIEHEIPKNEKEYLVINGCLL 113 >UniRef50_B6GBJ5 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GBJ5_9ACTN Length = 616 Score = 82.5 bits (203), Expect = 4e-15, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 ++ + + V T+ + + + + H+A AL+R G + PL +E ++++ + Sbjct: 156 RESLEVIAASVEDALTDGPININAISYQNLLVHIAIALVRINAGCYV-PLASEDMSDIER 214 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 S + A ++ + +E+ E Y+ +L G Sbjct: 215 RSEYAAARRVAGGIKSRLGMELPEEEVAYIAIHLAG 250 >UniRef50_Q67SK7 BglG family transcription antiterminator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SK7_SYMTH Length = 275 Score = 82.2 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 6/121 (4%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 R L + D+ +++N+ P+ E H+A+ + R R+G Sbjct: 55 RNRKRFLRLTETLSGDVIGVAEEILNLAAARFG-PLGEEAHLTLAEHLAATVDRVRKGMP 113 Query: 62 IEPLDNELLAELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 I N LA++ + Q +++ + + E+G L +L G W + + Sbjct: 114 I---PNPFLAQIQLLYPEEYALAGQAVEMIASRLGVTLPEEEQGILALHLLGAWRRESPK 170 Query: 120 V 120 V Sbjct: 171 V 171 Score = 40.9 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 5/78 (6%) Query: 38 RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFAL 95 + + + H+ A+ G+ N +L + + +L + + Sbjct: 197 DDPRLSRVLLHLRLAIDLIVSGKAET---NPVLDRIRSEYPEEFARARRLGDYMAQRLER 253 Query: 96 EVNPCEEGYLLANLYGLW 113 V+ E GYL +L L Sbjct: 254 PVSDDEVGYLALHLLRLK 271 >UniRef50_A6LX09 Transcriptional antiterminator, BglG n=11 Tax=Clostridium RepID=A6LX09_CLOB8 Length = 714 Score = 81.8 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + + V+ E + + + H+A A+ R ++I +D+ L L+++ Sbjct: 190 DIEFIGNVIKTAEDQLESTLSDYSFNNLLIHIAIAIKRIELAKDI-VMDDNELKNLSKTC 248 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + ++L + +++ E GY+ +L G + EE Sbjct: 249 EFSIASAMARMLENRYDIKIPKSEIGYMTIHLLGSNVMLKEE 290 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 5/90 (5%) Query: 30 ETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--AQSSHWQAVVQLHQ 87 T+ + + H+ + R + G I +N LL E+ + V + Sbjct: 312 RTKYNFEADEHLLEGLIQHIRPMIYRLKHGVSI---NNPLLDEIIYKYKEVFTLVEESLI 368 Query: 88 VLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 L K+ E++ E GY+ + Sbjct: 369 FLEKDLNAEISKEEIGYITLHFMASLERIK 398 >UniRef50_Q9KF98 BH0587 protein n=1 Tax=Bacillus halodurans RepID=Q9KF98_BACHD Length = 115 Score = 81.4 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 4/113 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ RL++L + I + + V T ++ TM +TH+A A+ R R E Sbjct: 4 LKARLDVLRDTNTITERASLIAERTVEQFVT----DENADSYTMLITHLAMAVTRIDRLE 59 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + P ++ E+ +S + + + + + E+ +L+ + Sbjct: 60 PLSPPPESIMKEIYESRDLEEAKRRVAWIEETMGDTLPQEEKEFLIMHFVSAL 112 >UniRef50_C6VLU3 Transcription regulator, mannitol operon n=2 Tax=Lactobacillus plantarum RepID=C6VLU3_LACPJ Length = 634 Score = 80.6 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ++K M +V+N + V Q + H A+ R + GE I + + Sbjct: 193 VNKQTLNQMQKVLNKFVKILKVDVNEYQYESLLIHTTIAIQRIKNGEFITQTTTQNFDTM 252 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 A S +L ++L+ F E+ E YL ++ + Sbjct: 253 AISPS---TNKLVKMLIVAFKCEIPDEEIAYLNMHVAAI 288 Score = 47.1 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 1/100 (1%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 E G ID D + + + ++ H+ AL+R + G I Sbjct: 289 EDGYIDLDRSGLVERTIVDWLRSVLTDYDNQLLRNLTLHLRPALVRIKNGISITNPYCNQ 348 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + + L + K++ L++ E YL + Sbjct: 349 VKT-YFPVAFDQALALAMAIEKQYHLQLTEDEIAYLALHF 387 >UniRef50_C7T9M3 Conserved protein n=2 Tax=Lactobacillus RepID=C7T9M3_LACRG Length = 116 Score = 80.6 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 +L +L + G + + + + + V M + H++ AL RS + E ++ Sbjct: 8 KLQILYDVGKLSDEDL----AFIRLADQYLVRTVGERDSEMFLIHLSIALERSHKQEPVD 63 Query: 64 PLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 L + L AE+ + + + + + + + + E Y++ +L + Sbjct: 64 ALPDNLWAEVTADPEYLNALNIWKHIAESRPVNFSDFETRYIIMHLVNILRR 115 >UniRef50_Q6LNG7 Putative uncharacterized protein PM1058 n=1 Tax=Photobacterium profundum RepID=Q6LNG7_PHOPR Length = 106 Score = 80.2 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLA 71 +I + G ++ V++L +E L +EQ MAMTH+A A R + I + LD ++LA Sbjct: 1 MISQVAHDGTVKAVDLLVSEWQLDTSTEQLQMAMTHLARATDRILSDQPITQGLDEDILA 60 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEV-NPCEEGYLLANLYGLWMAA 116 E+ + + ++ +L F +E E + L+NL+ L+ A Sbjct: 61 EIISDDDFPVIQATNRQILGGFGIEQAPDAENTFFLSNLFSLYCAK 106 >UniRef50_C7TNE9 PTS system, fructose-specific IIA component n=1 Tax=Lactobacillus rhamnosus Lc 705 RepID=C7TNE9_LACRL Length = 644 Score = 79.9 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 2/103 (1%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ID + + +VV + L + + H+A A+ R + G I +++L+ + Sbjct: 196 IDSSVVNILARVVQNASEKLGLSLSEYAIQSLVIHLAIAINRIKAGNPI-GQNDDLIRNI 254 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 VQL ++ KE + + E Y+ +L Sbjct: 255 GNERK-SEAVQLAAMVEKEVNVRLPDEEIAYIQIHLIAASANQ 296 Score = 40.6 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 1/66 (1%) Query: 44 MAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEG 103 HM +A+ R R I E + + + + + + +N E Sbjct: 328 GLTVHMQAAVKRLRVNAGISNPYTEDIKR-NYPQAFDEALIVSDDYERTEHISMNDDEVA 386 Query: 104 YLLANL 109 Y+ ++ Sbjct: 387 YVALHI 392 >UniRef50_UPI0001C42D0A transcriptional antiterminator n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42D0A Length = 713 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 53/101 (52%), Gaps = 2/101 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +ID ++ +++ ++ L + P+ H++ A+ R +RGE+IE +E + Sbjct: 199 LIDLNVILKVLETLHELRRDGE-PIADVSYVGLAVHLSLAVDRIKRGEKIEK-HSEGFEK 256 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + +++ ++A +L + L + F++++ E Y+ +L G Sbjct: 257 VLKTNEYEAAKRLVKKLEETFSIDIPQIEVAYVAMHLLGAK 297 >UniRef50_C9A355 Putative uncharacterized protein n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A355_ENTGA Length = 117 Score = 79.5 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 2/117 (1%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + +L +L ++G++D++ + V++ L + + +Q + +TH+A A MR + E Sbjct: 2 IRDKLTVLLDSGIVDQETYDYVFNVLSYLLEK-EIVEEEQQADVFLTHLAMADMRRKNNE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFAL-EVNPCEEGYLLANLYGLWMAA 116 + L++ + AE+ H+ +L Q L K + E Y ++ + Sbjct: 61 TVNSLESFIQAEIEGDPHYLHSRELWQDLQKMTSEQSFADAELDYFYLHIINMLREE 117 >UniRef50_Q184K6 Putative transcriptional antiterminator n=6 Tax=Clostridium difficile RepID=Q184K6_CLOD6 Length = 656 Score = 79.1 bits (194), Expect = 4e-14, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 3/100 (3%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G+ +D ++ ++ E + + H+A A+ R R+GE IE L Sbjct: 198 GIFSEDDLSIIIDILRNFSRERKFEFSDYEFQSLVIHLAIAVERIRKGEYIE---ESLYI 254 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 +++ L + L ++F++ + E GY+ +L Sbjct: 255 GNIENNQMSNTNYLAKQLEEKFSILLPKSEIGYINLHLVA 294 >UniRef50_A8U9C7 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8U9C7_9LACT Length = 116 Score = 78.3 bits (192), Expect = 7e-14, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 1/113 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ +L +L E VI+ + +V+ ++ ++ +TH+A A R E Sbjct: 2 IQEKLTILRENNVINDSVYDYAQEVL-KFMKAQNIINNEDEADTFITHLAMATARQYTEE 60 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 I +D + ++ + ++ + + E YL +L L Sbjct: 61 TINSVDQMINEQIKADQKYDEALKYWNEIAALAPIPFRENEAEYLHLHLVTLL 113 >UniRef50_C0D455 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D455_9CLOT Length = 639 Score = 77.9 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 1/96 (1%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +++ +G+ ++ ++ E + + + + H+ AL R R IE D L AE Sbjct: 191 LNRQEVEGIRIILRLVCREFSIVLSDASLSNLVIHVFIALTRYRFYNFIEA-DEALQAEY 249 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + A +L + L + + + E Y +L Sbjct: 250 RDAVEYAAAKRLTEALEEAYDFVIPDDEVIYYAMHL 285 >UniRef50_B6G9P7 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P7_9ACTN Length = 648 Score = 77.5 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Query: 32 ECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLK 91 E + S +TH+ AL+R R G + P++ E L E+ +S + ++ + Sbjct: 202 EERFAINSVAYRNLITHIVIALLRIREGCYV-PMEGEQLTEIRKSPSFPIARRISDSIGA 260 Query: 92 EFALEVNPCEEGYLLANLYGLWM 114 + + E Y+ +L G + Sbjct: 261 RTGVVLPDEEVAYIAIHLTGKRL 283 >UniRef50_UPI000178876C transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI000178876C Length = 295 Score = 75.6 bits (185), Expect = 5e-13, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 5/101 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE- 72 D + + Q++N++ E + + +H+ + R R+G +I N L E Sbjct: 75 FDPQVMEITDQILNLIGQEFPGTLNDKVYLALPSHIQFTIYRIRKGMDII---NPFLEET 131 Query: 73 -LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++ + + +++ K F +EV E G+L ++Y Sbjct: 132 RISFPKEYDIAAKAAELIGKTFDIEVPEDEIGFLTYHVYSA 172 Score = 48.7 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 6/98 (6%) Query: 20 KGMMQVVNVLETECHLPVR--SEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--AQ 75 + +V +E E + S + H+ ++ R E +DN ++ Sbjct: 186 NVVGSLVKYIEEERQVAFDRGSMDYVRLLMHLRFSVDRILNQEI--HVDNPFAEQIRSKF 243 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + +L ++ KE +V E +L +LY L+ Sbjct: 244 TQEYGLATRLSGMMEKELGKKVPEAEVCFLAMHLYRLF 281 >UniRef50_Q65MQ9 Putative uncharacterized protein n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=Q65MQ9_BACLD Length = 121 Score = 74.8 bits (183), Expect = 7e-13, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 1/110 (0%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E +L++L + VI K+ + L + V + M THMA AL R + GE Sbjct: 6 LEEKLSILLTSRVITKNAFNTTLNTFVFLSEKLKKEVIKDS-EMFWTHMAMALTRIKEGE 64 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 E N ++ E+ ++ + A+ ++ + LE+ E Y +L+ Sbjct: 65 SEEVPANAIINEMYETPYKSAIEEVIDFIHSLAGLELPEGELVYFYLHLH 114 >UniRef50_Q5WKS9 Transcriptional antiterminator of lichenan operon n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WKS9_BACSK Length = 649 Score = 74.1 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 1/115 (0%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L L + ++ + ++ E + + H+ A R G I Sbjct: 186 LTSLQLTAFMKEEQLADIWDILVTTMQENGVTLSDIAINNLFIHIVIAFKRIEAGHHIS- 244 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 L + ++++ + ++ L + E Y+ +L G + A E Sbjct: 245 LYRKDMSDICSQHEYYVAQKMIARLNTHLGVSFPEMEIAYIAIHLLGTRLVAENE 299 Score = 55.2 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELL 70 V D + K +V +E E L + ++Q M H+ A+ R R G I N +L Sbjct: 308 VFDDEYYKLAKAIVEKVERELDLNIANDQELLVSLMLHLKPAINRYRYGMNIR---NPML 364 Query: 71 AELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 A++ Q + ++A V V+ + + ++ E GYL ++ N++ Sbjct: 365 ADIKQHYTLAFEAAVIGQAVIKDKLGISIDENEIGYLALHIGAALERRNQQ 415 >UniRef50_B9CU63 Transcriptional antiterminator, BglG family/DNA-binding protein n=3 Tax=Staphylococcus RepID=B9CU63_STACP Length = 675 Score = 73.7 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 42/107 (39%), Gaps = 1/107 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++D D + +++ + + H+ ++ R + GE + L+ ++ Sbjct: 196 LVDLDRIFKIERILMDYLGQLPYTLTESSYLTLTIHIVLSITRMQNGEYVS-LNKDIYET 254 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + + ++ + L + +E N E ++ +L G ++ Sbjct: 255 VKDTFEHEVATEIAKRLEEIHNVEFNQAEITFITIHLRGAKRKGTKD 301 >UniRef50_A8W0Y8 Transcriptional antiterminator, BglG (Fragment) n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0Y8_9BACI Length = 200 Score = 73.3 bits (179), Expect = 2e-12, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 39/102 (38%), Gaps = 5/102 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE- 72 +D+ M + ++ LET + H+ A+ R G+ I N L E Sbjct: 2 VDEQFVGVMNEFIDKLETRFGANLNEHIHIGLTDHLHFAVKRIENGQGIH---NPFLQET 58 Query: 73 -LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 LA + +L + + + + P E G++ +++ Sbjct: 59 ELAYPQEFAVATELTEWFGNQVGIRIPPGEIGFITLHIHSAL 100 >UniRef50_C1QBY4 PTS system IIA component; transcriptional antiterminator, BglG family n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QBY4_9SPIR Length = 621 Score = 72.9 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 I K + + V + + + + ++ ++ R + G+ I+ D ++L ++ + Sbjct: 172 INKSIEKFVIDFIKDNDIKLSEINLENFILYILVSIERIKMGKVIDCYDKDILKDIKE-E 230 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + QL ++L KE ++ N E+ ++ ++ + + E Sbjct: 231 ELKLANQLAEILEKESNIKFNEAEKIFIAIHIASKSLLISSE 272 >UniRef50_Q040S8 Beta-glucoside operon antiterminator n=12 Tax=Lactobacillus RepID=Q040S8_LACGA Length = 282 Score = 72.5 bits (177), Expect = 3e-12, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R LL D + ++V+ L+ E ++ + H+A+++ R+++G Sbjct: 55 QRKLLLETIHETDPIFFQISQKIVDRLKHEENIELADSVYITLTDHLATSVERAKKGLY- 113 Query: 63 EPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L N+ + E+ ++ + ++L +F L E G++ ++ Sbjct: 114 --LSNKFIWEVKNYYPKEYRYGLWALKLLDAQFDLNFPEDEAGFIAVHIIS 162 >UniRef50_C6PFK2 PTS modulated transcriptional regulator, MtlR family n=3 Tax=Thermoanaerobacter RepID=C6PFK2_9THEO Length = 651 Score = 72.5 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 ++ + +++ E + + + + H+A ++ R G+++ +L Sbjct: 183 DLLKDVDLNAIQRIIQGSEEKFNYILSDVSFKGLLIHLAISIKRLWEGKKVTLDLKDLNL 242 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 L + W+ L + + K F + V+ E GY+ +L G + + E Sbjct: 243 -LKKEKEWEIAKDLAKNIEKRFNVVVDDTEIGYITMHLMGAKLQNDIE 289 Score = 43.3 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 7/100 (7%) Query: 14 IDKDICKGMMQVVNVLET--ECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +D + + +VN + + H+ + R + G LDN L Sbjct: 301 LDCKLYIILKSIVNDIAEMTGYKFYNDKKLLVGLFLHLKPTINRLKNG---VKLDNPFLE 357 Query: 72 ELAQSS--HWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 E+ + ++ + + L + + + VN E GY+ + Sbjct: 358 EIKKECGIAFEISISFWEKLKEFYKINVNEDEIGYVAIHF 397 >UniRef50_Q8NVE5 MW2083 protein n=56 Tax=Staphylococcus RepID=Q8NVE5_STAAW Length = 710 Score = 71.8 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 12/102 (11%), Positives = 39/102 (38%), Gaps = 1/102 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +D + + +++ + + H+ ++ R + GE + L++++ Sbjct: 195 DFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYV-ALNDDIYD 253 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + + +L L + + + N E ++ +L G Sbjct: 254 SVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAK 295 >UniRef50_B6G824 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G824_9ACTN Length = 470 Score = 71.4 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 37/93 (39%), Gaps = 1/93 (1%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + V+ L + + + H+ AL+R + P+++ L + +S Sbjct: 2 LDAIAVCVSEAAEAQLLTINAAAFQNLLVHIVIALIRISNDCYV-PIEDSRLQRIVATSE 60 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++A + + + ++ + E Y+ +L G Sbjct: 61 YRAAEDIARRIDALTSISLPQEEVAYIAIHLAG 93 >UniRef50_C4G9M5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9M5_9FIRM Length = 698 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECH--LPVRSEQGTMAMTHMASALMRSRR 58 + TR L ++ D + +V+ + E + T + H+A A+ R ++ Sbjct: 190 IHTRDQNLY--ALLATDTVSRVYEVLARMRKEETRLKGLAESAYTNLIFHLAIAVERVKK 247 Query: 59 GEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 G +E D L+ +L + ++ + +EF++ + E Y+L +L G MA +E Sbjct: 248 GAIVEE-DPGLVNKLGTWDEYALAGKIRGEIEREFSIHMPDQELSYILLHLLGSKMAYHE 306 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 7/98 (7%) Query: 16 KDICKGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +D+ + + ++++ +TE + E + H+ A+ R I N +L E+ Sbjct: 319 EDLLEIIDRMIDQFDTEMANSLKCDEEFIRGLIMHLQPAMFRMSEKMSI---YNPVLPEI 375 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + + +V+ E A EV+ E G+L + Sbjct: 376 KREYPEIYAKSRRAAEVIRDETAFEVSDDEIGFLSMHF 413 >UniRef50_A0AMB6 Complete genome n=18 Tax=Listeria RepID=A0AMB6_LISW6 Length = 638 Score = 71.0 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 4/103 (3%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 E + + + QVV + ++ + + H+A A+ R + + D Sbjct: 188 ERNFFSEVNLEMIEQVVISNIAKYNIHMTDISVKNLIIHIAIAVCRVKDNCYVHVTD--- 244 Query: 70 LAELAQS-SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L ++ S ++A + + + + E YLL +L Sbjct: 245 LEDIEFSIPEFRAAQDIIKEIDLSEGIHFPESEISYLLLHLSS 287 Score = 37.9 bits (87), Expect = 0.097, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 19 CKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS 76 + +++ ++ + +Q + H+ A+ R + I+ + L Sbjct: 300 YIIVDKMLTKIKELYGYDFKQDQKMISNIALHLKPAINRMKFNMNIQNPYLKNLKS-NYP 358 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLAN-LYGL 112 ++ + VL +E +VN E GYL + LYGL Sbjct: 359 LAFELGLVAKDVLEQELKTKVNEAEVGYLAIHFLYGL 395 >UniRef50_A6NQL9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NQL9_9BACE Length = 657 Score = 69.1 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 40/101 (39%), Gaps = 3/101 (2%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL-AEL 73 K M ++++ E + + T + H++ A+ R G+ + +D++ + Sbjct: 213 PKADVGEMAKIIHDAEKKYDFYLMDSYYTSLLVHLSIAVERLSGGQSV--VDSDAYPESI 270 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + + + + + F + + E Y+ +L G + Sbjct: 271 LEYREGEIAKYIAWRMEEAFHICIPNSERSYICIHLMGAEL 311 >UniRef50_Q03GK2 Transcriptional antiterminator n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03GK2_PEDPA Length = 625 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 13/105 (12%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTM-AMTHMASALMRSRRGEEIE-PLDNELLA 71 I K+ + +++ + + + + + H++ + R + G+ I+ P+ ++ A Sbjct: 280 ISKETLNLIKSILSYVRSIYRIDLTGPEFLNQFAIHVSRLIQRLKSGKSIQNPMATQMKA 339 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + ++ V + + + +EV E Y+ ++ Sbjct: 340 --QSPTVYECAVLISHKIASQVGVEVPDNEIAYIAMHIGNAIAKQ 382 Score = 40.2 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 9/88 (10%), Positives = 26/88 (29%), Gaps = 6/88 (6%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + + + + + + + + H+ A+ R R G + + DN Sbjct: 174 FPEVNLDSLYAITQKFAKKNEIYLNTFDLNNIILHITIAIQRIRNGYQFQTRDNRFNW-- 231 Query: 74 AQSSHWQAVVQLHQVLLK-EFALEVNPC 100 + +L + K + + Sbjct: 232 ---KSSKFAQELLNEVEKSQKNFKFPDE 256 >UniRef50_C8NIB7 Putative uncharacterized protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NIB7_9LACT Length = 122 Score = 68.7 bits (167), Expect = 5e-11, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 3/115 (2%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 +E +L++L A VID+D K +++ + E + + + + H+A A R R+ E Sbjct: 2 LEEKLDVLVVADVIDEDTKKYILKASDFFRNEMKIN-DDTKVEVFLIHLAMAESRRRKNE 60 Query: 61 EIEP-LDNELLAELAQSSHWQAVVQLHQVLLKEFALEV-NPCEEGYLLANLYGLW 113 ++ ++ + E+ ++ + L EV + E ++ +L L Sbjct: 61 VLDAKMEEIIRNEVNNHHNFAECKEFWSRLSNYIGEEVYSENELEFIYLHLLNLL 115 >UniRef50_A0RA54 Transcription antiterminator, BglG family n=75 Tax=Bacillus cereus group RepID=A0RA54_BACAH Length = 651 Score = 68.3 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 1/97 (1%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 + V+ + + + + H+A AL R ++ L+ E +EL + Sbjct: 203 IRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQHYMKGLNAE-QSELIIKKEYTI 261 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 Q+ L KE L E Y+ +L + + + Sbjct: 262 AKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKD 298 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 ++ KD+ M ++ + E +L E H+ + L R + N L Sbjct: 305 ELLGKDLYAFMQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTR---NPL 361 Query: 70 LAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 LAE+ + ++ V + ++ + + E GY+ + G E+ Sbjct: 362 LAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQ 413 >UniRef50_C7REJ5 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Anaerococcus RepID=C7REJ5_ANAPD Length = 625 Score = 68.3 bits (166), Expect = 7e-11, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 42/105 (40%), Gaps = 1/105 (0%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D+++ + ++ ++ + + H+ +++R + G+ I+ L +EL + Sbjct: 182 DEELFTRIQAIIADIDFPESFYMPYANFKNLVVHIYISILRIKEGKYID-LSDELSKRVI 240 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + ++ + L K+ L E YL +L N E Sbjct: 241 SYDEFNIANKVVKELSKKLDLTFPEDEILYLTMHLISKNAVTNYE 285 Score = 40.2 bits (93), Expect = 0.021, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 36/102 (35%), Gaps = 6/102 (5%) Query: 14 IDKDICKGMMQVVNVL--ETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + +I + ++++ + ++ + H+ + R R G + N +L Sbjct: 287 VSPEISELAQKMIDEIYKVSKYDFRSNIDLFFALALHLGPLIERLRYGLT---MKNPILN 343 Query: 72 ELAQSSH-WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++ + + + + + V E GY+ ++ Sbjct: 344 DIKDNQIAFMLATVATNPINETYKTRVCDDEIGYIALHIASA 385 >UniRef50_B4U3Q3 BglG family transcription antiterminator, PTS system IIA component n=8 Tax=Streptococcus RepID=B4U3Q3_STREM Length = 665 Score = 65.2 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNE 68 + +D + +V + L + + H+A + R R G + Sbjct: 186 VDNTFLDHIKFADITIIVLDECRDAKLKLSDFVMHNLVLHIALMVQRIRSGYPLAFF--S 243 Query: 69 LLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + A + QS +Q +++ + + + E Y+ +L Sbjct: 244 IPAAIRQSDEYQVALRILYRVEEVMGIRFPKEEANYIALHL 284 >UniRef50_Q63A16 Possible transcriptional antiterminator, bglG family n=15 Tax=Bacillus cereus group RepID=Q63A16_BACCZ Length = 701 Score = 65.2 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 E + ++ + +++ E + E +M R +G+ +E ++ Sbjct: 193 ETDTLARETLYIIKKILANCEEFLGVQYTDEVLENLSVYMYLFHRRILKGKCVE-MEEAE 251 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 L S ++A + + + F ++ E Y+ +L G + E V Sbjct: 252 KNVLKDSKQFEAAKYIAKQFERAFVVKFPIDEIYYITTHLLGAKVNYQENV 302 Score = 37.9 bits (87), Expect = 0.093, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 8/115 (6%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLP--VRSEQGTMAMT----HMASALMRSRRGEEI 62 + V +K+ + +V+ + + V + T HM A R + G EI Sbjct: 298 YQENVYEKNNMDEIHSIVDCMIKDFQHYACVLFQDFNGLFTDLYLHMKPAFYRVKYGIEI 357 Query: 63 EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 E + E + ++ + V+ E Y+ + +G WM Sbjct: 358 ENPLRNTIQE-NYEEVYFLTKKVIHHFEEYVRKSVSDDEIAYVTMH-FGAWMRKE 410 >UniRef50_B9Y4E8 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4E8_9FIRM Length = 654 Score = 64.8 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 44/108 (40%), Gaps = 3/108 (2%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 ++D + + ++ + + + + + + H+ A+ R + ++ +++E L EL Sbjct: 210 NQDEIRFVRGLLEEIMEKYGIHMSDQSLQNFVIHIIIAIRRWKFYNYVK-IEDENLGELR 268 Query: 75 QS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 S W A L + L + + + E Y + + +E+ Sbjct: 269 SSVAREWPAAQDLVRRLQDKLEILLPQEEILYFALHFKSKHITELDEI 316 >UniRef50_C5EFS9 Predicted protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EFS9_9FIRM Length = 643 Score = 64.8 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 40/100 (40%), Gaps = 1/100 (1%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + + + +++ +E + M +A + R R G P + E L Q Sbjct: 186 ETDLQEIHTILHDMEDDYGFTFADSSYAEMMISLAITVERVRNGNVCCPTEGE-LNGYRQ 244 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 + W + + L +EF + ++ E+ Y+ NL G + Sbjct: 245 KNQWSMAGHMARKLEQEFHIVMDEGEQAYITMNLMGAKLQ 284 >UniRef50_C6CTN7 Transcriptional antiterminator, BglG n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CTN7_PAESJ Length = 286 Score = 64.8 bits (157), Expect = 8e-10, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 45/100 (45%), Gaps = 3/100 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA-E 72 +D ++ + Q+++ + PV + +H+ + R R G EI ++ L + Sbjct: 75 LDPEVVQISEQIIDEIRERLGTPVDPKVYFALPSHIQFVVYRLRNGMEI--VNPFLYETK 132 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + ++ + +++ ++F + + E G+L ++Y Sbjct: 133 MCYPQEFKIAAKAAKMISEKFDITIPEDEVGFLTYHVYSA 172 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + M ++V +E P+ + + H+ + R + +E E + + + + Sbjct: 186 ELMNEIVERIEGWREAPLSKKSSDYARLIMHLRYMMERILQNKETENPFSAEIKD-KIPT 244 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 Q + Q++ + ++V+ E GYL +LY L+ + + E Sbjct: 245 EHQKAELIAQMIGERLNVKVSSDEIGYLAMHLYRLFRSVDAE 286 >UniRef50_C7IC29 Transcriptional antiterminator, BglG n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IC29_9CLOT Length = 643 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 1/105 (0%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 K + +++ E + + E TH+ ++ R +G +++ ++EL+ Sbjct: 209 PKINIDEIGNIIHNAEKKFAFFMPEEHYNSMFTHLVISIGRLLKGIKVDD-ESELIEGQC 267 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 Q + L +EF + + E Y+ +L GL + + + Sbjct: 268 NDIETQVARYIVSRLEEEFKISIPQAEFAYICMHLMGLNIYSGTD 312 >UniRef50_Q1JGE0 Transcription antiterminator, BglG family / PTS system, mannitol (Cryptic)-specific IIA component n=14 Tax=Streptococcus RepID=Q1JGE0_STRPD Length = 664 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 2/88 (2%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 +M +V + L + + H+A + R R G +E + + QS +Q Sbjct: 198 IMIIVLYECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLELFSIPI--AIRQSDEYQV 255 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANL 109 +++ + + + E Y+ +L Sbjct: 256 ALRILYRVEEVMGIRFPKEEANYIALHL 283 >UniRef50_C5WHN0 Transcriptional antiterminator bglG n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis GGS_124 RepID=C5WHN0_STRDG Length = 661 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 5/96 (5%) Query: 25 VVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQ 84 +V L + + H+A A+ R ++G I P++ L E Sbjct: 200 IVLDECRNQELKLSDYAIQNLVIHLALAIQRFQKGFRIAPVE---LCECKYQKELLVARN 256 Query: 85 LHQVLLKEFALE--VNPCEEGYLLANLYGLWMAANE 118 + L E + E Y+ +L +A + Sbjct: 257 IADRLANRLGQEELIPEEETAYIALHLISKSVAEQD 292 >UniRef50_A8U731 Transcriptional regulator n=1 Tax=Carnobacterium sp. AT7 RepID=A8U731_9LACT Length = 641 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 4/107 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSR-RGEEIEPLDNELLAE 72 I + ++V + +P+ + H+ A+ R R + I+ N + Sbjct: 188 ISSTDKVSVEEIVIRNIRKYQIPITDIGFRNLIIHVEIAISRLRFQNNSIDQKPNTIEE- 246 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 S + + + + + L + E + +L G E Sbjct: 247 --HSDEYYCAKAIAKEIEAKINLTIPENEIANIYLHLLGQKRMLVSE 291 Score = 50.2 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 7/103 (6%) Query: 20 KGMMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + + +V+ + L R + + H+ SAL R R I +NEL+ E+ + Sbjct: 304 ELIERVIVEINEMYQLDFRQDVILKNGLLLHLESALHRIRLNMPI---NNELIEEIKNNY 360 Query: 78 HWQ--AVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + L L F ++++ E G+L + G AN Sbjct: 361 PFPMQLAKILASSLETNFNIKIDINEVGFLTLHFCGALERANS 403 >UniRef50_A6M2G4 Sigma-54 factor, interaction domain-containing protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M2G4_CLOB8 Length = 895 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 42/98 (42%), Gaps = 1/98 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 ++DKD+ + +++ E E + + + H+++++ R RR ++I + Sbjct: 434 NIVDKDVMDIIEEIILFCEEELGIKLDKKISYGLAVHISNSIDRIRRNKKIVNPKLSSIR 493 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 E + + +++ + + + E G++ L Sbjct: 494 E-ENKKEFSVALDALKMIERSIDISMPIDEAGFIAMFL 530 >UniRef50_A0Q2H7 SACPA operon antiterminator n=3 Tax=Clostridium RepID=A0Q2H7_CLONN Length = 279 Score = 64.1 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 42/114 (36%), Gaps = 5/114 (4%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L +D I + ++ ++ E P+ + H+ + R + G L+N Sbjct: 63 LQFTNNLDPKIAELTKDILKIISEEFSRPLNPNVHVNLIDHIQFTVKRLKSGMI---LEN 119 Query: 68 ELLAE--LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 L E L + + ++L K + E G++ ++ G +++ Sbjct: 120 PFLTETKLLYPKEYAVAEKAVEILSKGLNMHFPDAEIGFITLHICGGLNEKSKK 173 Score = 54.8 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 42/100 (42%), Gaps = 7/100 (7%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGT--MAMTHMASALMRSRRGEEIEPLDNELLAELA 74 + + + ++N + + ++ + + H+ L R + + ++ N LL EL Sbjct: 177 ENAQLINTILNFVSKKLNITLDPHSFEYKGFVNHLRGVLNRIKNNKILK---NNLLTELK 233 Query: 75 QSS--HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + ++ + +++ + V E GY+ ++ L Sbjct: 234 KRNIIEYKIAYDVSKIIENVLQISVPEDEIGYITIHIMKL 273 >UniRef50_C0CV60 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CV60_9CLOT Length = 699 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 41/105 (39%), Gaps = 3/105 (2%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSR-RGEEIEPLDNELLAELA 74 +D + +V +E + + H+A ++ R R E EP + + Sbjct: 190 EDGLNKIKAIVTDVEEAFATYLDDIAYEALVIHIALSIKRFRLDEEYGEPKAADRIE--R 247 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 S +Q +++ + + + F + + E Y+ ++ A ++ Sbjct: 248 DSLQYQMALEIVRRVNECFRIRLPDAEISYVAVHMGAKSSAITKQ 292 >UniRef50_C2C483 Possible MtlR transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C483_LISGR Length = 691 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +ID+ + + + +V+ + + + + H+ ++ R G I L NE Sbjct: 196 HLIDRKLIQKVEKVLRNWRQQLEYQITDDAYISLVIHIVISIDRMLAGHFIYELRNENAK 255 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 +Q ++ L+ A V E G + ++ G Sbjct: 256 RY---PEFQTAKEIIAECLEMEADVVPDGEAGLVTMHIRGAKALH 297 >UniRef50_A8AYJ7 Transcription antiterminator BglG family n=3 Tax=Streptococcus RepID=A8AYJ7_STRGC Length = 662 Score = 63.7 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Query: 25 VVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQ 84 +V E L + + H+A +L R G +I+ LD+ + E + + Sbjct: 200 IVLDECREGQLKLSDFVIQNLVIHIALSLKRIGEGFQIKQLDSWSMDEYR--EEGKIAEK 257 Query: 85 LHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + L+ E Y+ +L Sbjct: 258 ILKRVYHSTGLKFPKEEVDYITLHLVS 284 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 11/113 (9%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A I K + + Q + E + + H+++ +R + +DN LL Sbjct: 299 AQQIRKQLLFVLEQ--SNFTHEYPFKNDFQLIEGLVAHLSTLFVRLKNH---VKMDNPLL 353 Query: 71 AELAQSSHWQAVVQLHQVLLKEFAL----EVNPCEEGYLLANLYGLWMAANEE 119 AE+ H+ V+++ +L + +++ E Y+ + E+ Sbjct: 354 AEIQN--HYAGVLEMTGNILSAMPIFANEKLSADEVAYVALHFMTSLERLKEK 404 >UniRef50_A5IPR4 Transcriptional antiterminator, BglG n=52 Tax=Staphylococcus aureus RepID=A5IPR4_STAA9 Length = 651 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 12/111 (10%), Positives = 38/111 (34%), Gaps = 1/111 (0%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 EA + + + + + + + + + H+ A+ R + N Sbjct: 174 FIEADIFNSESIALVRRAIIKTLNSENYHLVQSAIDGLIYHILIAIQRLNENFSFDIPIN 233 Query: 68 ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 E+ + ++ + ++ + L + + E ++ +L G M + Sbjct: 234 EI-DKWRHTNQYAIASKMIENLERSCNVTFPESEIIFITLHLLGSKMTEHT 283 Score = 40.2 bits (93), Expect = 0.020, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 7/99 (7%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL- 73 D+ + + +++ + E + + + T +TH+ A+ R + N L E+ Sbjct: 293 DLSQNIHELITCVSQELGIDMSKDNKLHTSLITHIKPAIHRIK---YDMLQPNPLRQEVM 349 Query: 74 -AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 +AV + + ++ A+ N E Y+ + Sbjct: 350 RRYPQIIEAVSKHISPIEQDAAIRFNEDELTYITIHFAS 388 >UniRef50_C2H7N3 BglG family transcriptional antiterminator n=12 Tax=Enterococcus faecium RepID=C2H7N3_ENTFC Length = 661 Score = 63.3 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 2/104 (1%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L ++ + ++ ++ E L V H+A + R R G EI+ L Sbjct: 187 LGQSRFFTDISFEELVIIILDETREAKLKVSDFIIQNLSLHLALGIKRLREGFEIKEL-- 244 Query: 68 ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + E++ +Q ++ Q + + E YL +L Sbjct: 245 GIEQEVSDRVEYQVAQRIVQRIEVIADVSFPQEEIAYLTLHLMA 288 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 5/102 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIE-PLDNELLA 71 D+++ K +++V+ L E + + + H++ ++R RG IE PL E+ Sbjct: 298 DQELSKEVVKVLKRLSQEFRFSLIEDHQLFNGLLDHLSPMMIRLSRGIRIENPLTEEIKK 357 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 E ++AV + +N E YL +L Sbjct: 358 E--NPKVFEAVKTHFSNMPALKNYTINEDEWAYLALHLMAAL 397 >UniRef50_C4FAP7 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAP7_9ACTN Length = 295 Score = 63.3 bits (153), Expect = 3e-09, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 7/118 (5%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 RL L + I + +V +L E + H++ AL R + G Sbjct: 57 RLERLIKG--IPSEYLLIAEDIVAMLRRESDSVIDDSVLIALTDHISMALEREQAG---I 111 Query: 64 PLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 DN LL E+ + ++ ++ +++ +E++ E G++ ++ M + Sbjct: 112 ICDNPLLFEIKRFYGREFELALKAREIIRGHLGIEISEAEVGFIALHIVNATMKQRTD 169 Score = 38.3 bits (88), Expect = 0.074, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 6/99 (6%) Query: 19 CKGMMQVVNVLETECHLPVRS--EQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--- 73 K + ++N + L Q + H+ R + I ++ L L Sbjct: 175 IKMINGILNTVSETFGLTYDEGSVQYERFLRHLQFFSQRVLD-KSIAQSEDTFLFHLGKD 233 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + ++ + +E+ V+ E+GYL+ ++ L Sbjct: 234 QYPDALECTERIGAHIEQEYGCVVSDAEKGYLVYHIANL 272 >UniRef50_B0KCX3 PTS system transcriptional activator n=13 Tax=Clostridia RepID=B0KCX3_THEP3 Length = 901 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 V+DK I + +N + P + H+AS++ R G++I N L Sbjct: 443 VVDKKIVDIVNDFLNYASKKLKRPFSEKTLYGLSMHVASSVERILSGKDIV---NHQLEN 499 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 + + ++ L + + KEF ++V E G++ L Sbjct: 500 IKKVYEKEFEVANVLRERVQKEFNIKVPDDEVGFVTMFLC 539 Score = 43.6 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 8/101 (7%), Positives = 37/101 (36%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ ++ E ID + + + + + + H+A + R +G+ Sbjct: 790 IDNMKEVIRENIKIDSEKYISFFKKFYAALIREGVNLNEDITIGLILHLACVIERILQGK 849 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCE 101 ++ + + + + + +++ + ++++ E Sbjct: 850 QLIHMKDTQEYIKNYPKEFDIIKKAIRIIEEGCNVKISDEE 890 >UniRef50_O31644 Putative phosphotransferase enzyme IIA component n=19 Tax=Bacillaceae RepID=MANR_BACSU Length = 648 Score = 62.9 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 1/98 (1%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + + + L+ + L E + H + R + + I L + +A + + Sbjct: 193 VDFVTKEIKSLQKKHSLYFTDETFESLLLHTLLMVRRIKMKQPIS-LSPKEMAAVKKKKE 251 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 +Q Q L FA+ E YL ++ G + Sbjct: 252 YQWTFACLQRLEPVFAIRFPEEEAVYLTLHILGGKVRY 289 >UniRef50_D1B7A6 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B7A6_THEAS Length = 646 Score = 62.5 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 3/101 (2%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + + V + + E H+A ++ R R G +E +E L Sbjct: 186 IFHPGEMSFLEARVRRALEMAQVRLTGEAVLGLTVHLAVSIKRVRTGGALEICRDEGLE- 244 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +A + + + + + + P E YL ++ Sbjct: 245 --GRREMEAARLMARWVEEGLGVTMPPGEVEYLAMHVMSSR 283 Score = 44.8 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 44/111 (39%), Gaps = 10/111 (9%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L +A + + + + ++ E + G H+++++ R R G P Sbjct: 291 KELARDAEAVARILLDHFARSLDRRLQEDPQLLADLSG-----HLSTSINRLRCGF---P 342 Query: 65 LDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 N +L ++ + ++ ++ + ++ + + E GY++ ++ Sbjct: 343 SSNPILGQIKRAFCYSFEVGLEGAARVQEDMGINLPEDEVGYVVLHVQAAL 393 >UniRef50_A4EAF5 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAF5_9ACTN Length = 272 Score = 62.5 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 7/119 (5%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 RL L E+ I +V +L E ++ + + H++ AL R R+G I Sbjct: 50 DRLAHLLES--IPTVNLVISEDIVQMLRRELNVDINDKILIALADHISLALERERKG--I 105 Query: 63 EPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 +N LL E+ Q + + Q++ + ++++ E+G++ ++ M + Sbjct: 106 SC-ENPLLLEIQQFYRKEYALAGRALQIIKEYMGIQMSEEEQGFITLHIVNATMPQRSD 163 >UniRef50_A5KQG9 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQG9_9FIRM Length = 217 Score = 62.5 bits (151), Expect = 4e-09, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G I + + + ++ + E + ++ + H+ A+ R + LDN Sbjct: 3 GAIPPEYFELVEEIFEKAKEEYGFLPKEKETLALLDHIHFAIKRMKEN---LVLDNPFET 59 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 E+ Q W+ + + + + F +E+ E GY+ ++ + Sbjct: 60 EIRQFYPKEWEIGLYAKKCIKRRFGIEIPDAEVGYIAMHIIASEFQKS 107 >UniRef50_C6DCM5 Transcriptional antiterminator, BglG n=7 Tax=Enterobacteriaceae RepID=C6DCM5_PECCP Length = 278 Score = 62.1 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 42/101 (41%), Gaps = 5/101 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I D Q++ + + L V+ H+ A+ R ++G+ I+ L +L ++ Sbjct: 66 IPPDCLAVTQQIITLAQKTLRLNVQDTLFLALSDHINFAIQRHKKGQTIKNL---MLWDI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 Q S + ++ ++ +++ E G++ +L Sbjct: 123 RQFYHSEFAVGLEALALIRTRLGIDLPEDEAGFIALHLANA 163 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 10/93 (10%), Positives = 37/93 (39%), Gaps = 4/93 (4%) Query: 21 GMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--S 76 + ++ +L+ + H+ +TH+ +R E + D+ + + + Sbjct: 178 IIKDILTILKYDLHITFDEHSLNYQRLVTHLKFFALRLLNRETVSHGDDSIYQGITEMMP 237 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++++ + K + ++ E +L ++ Sbjct: 238 RAYACAMKVYDYVEKNYGCQLTTDEIMFLTIHI 270 >UniRef50_A8SBZ8 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SBZ8_9FIRM Length = 341 Score = 61.7 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E + L + + + + +++ E + + S+ + H++ AL R +G Sbjct: 122 ELQTKFLKMLDNVTPQVMQAAER-ISLAAEEQGILLSSKSTISLVDHISFALERVEKG-- 178 Query: 62 IEPLDNELLAE--LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L N +L+E + + + +++ + +++ E GY+ +L Sbjct: 179 -TFLPNLMLSETRMLYPKEYAVGQRALELVRQFCGVQLPEDEAGYIALHLVA 229 >UniRef50_C6IY31 Transcriptional antiterminator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IY31_9BACL Length = 650 Score = 61.7 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 1/105 (0%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + + + LE + L E + H + R++ + I + + Sbjct: 187 PHELDIVTRELKQLELDAQLAFTDEAFDNLLIHTLLMIRRTKLKQPIT-FSEQEKVFVRG 245 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++ + L + FA+ E YL A++ G + + + Sbjct: 246 KPEFRWTGAFIRKLERFFAVRFPEDEVAYLTAHILGGKIRSRARI 290 >UniRef50_A4ILQ1 Transcription antiterminator n=10 Tax=Bacillaceae RepID=A4ILQ1_GEOTN Length = 298 Score = 61.4 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 43/106 (40%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + ++ M +V+ ++ +P+ H+A L R +G +++ N L E Sbjct: 83 LSEEFIALMNEVIQHIKQRVGVPLNEHIHVALTDHIAFTLKRLEQGLDVK---NPFLVET 139 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 ++ ++ +++ + + + E G++ +++ + Sbjct: 140 KSLYPLEYEIAAEVAELIGDKLGVALPEGEVGFITLHIHSAISKQS 185 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDN--ELLAELAQ 75 + + ++V +++ + + + E + H+ A+ R ++GE++E N ++L E A Sbjct: 194 QLIAKLVEIVKQQLGVDIDRESIHYLRFVRHLRYAIDRLKKGEKVEKPKNLSKILKE-AY 252 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + +L +V+ + L + E YL +L Sbjct: 253 PLCYNLAWKLVKVMQQTLQLPADDAEAVYLTLHL 286 >UniRef50_C0ZH78 Probable transcriptional antiterminator n=2 Tax=Paenibacillaceae RepID=C0ZH78_BREBN Length = 285 Score = 61.4 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 39/102 (38%), Gaps = 5/102 (4%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +D + +++ ++ +E + H+ A+ R G EI N L E Sbjct: 76 QVDPAVVGIAEEIIALIASEITPELNEHVHVALPDHIQFAIYRLNNGMEIV---NPFLFE 132 Query: 73 LA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + + + ++ F L++ E G+L +++ Sbjct: 133 IQTLYTKEYALANRAADMIKNAFDLDIPDSEIGFLALHIHSA 174 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 7/98 (7%) Query: 20 KGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA--Q 75 + ++V+++E + + + + +TH+ A+ R R+ + I+ N LL + Sbjct: 188 NIITELVSLIEEQTAITIERSTIDYVRLITHLRFAVERIRQQKFIK---NPLLDRVKTTM 244 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +Q +L Q + + V E GY+ +LY L Sbjct: 245 PEAYQLATELAQYISTRLEIAVPEDEVGYMALHLYRLL 282 >UniRef50_C6IXJ3 Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXJ3_9BACL Length = 696 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 ++ + +++ E + + E + + R ++G ++ L+ E A L + Sbjct: 189 EEELDSVYRIIVSTEQQIGMEWTDETILHLTLRIWLSANRMKQGRTVQ-LEEEEKAALRE 247 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + ++A Q+ L + F L V E GYL L + Sbjct: 248 TLQFKAATQIADELGERFDLRVPEDEIGYLAIYLLAAKV 286 Score = 41.3 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Query: 22 MMQVVNVLETECHLPVRSEQGTM--AMTHMASALMRSRRGEEIE-PLDNELLAELAQSSH 78 +V+++ + ++ + + H+ S R + G I+ PL +++L E Sbjct: 305 TEEVIDLFAKNGCVYFQNREALVKQLFLHVKSMFYRIKYGLTIDNPLTDKILEEYR--EV 362 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ + L + F + E YL + G + Sbjct: 363 YELTRKSASPLERLFEKPLGRHEIAYLTMHFGGWLKREQAK 403 >UniRef50_C2BXN0 Transcriptional antiterminator n=2 Tax=Bacilli RepID=C2BXN0_LISGR Length = 646 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 6/103 (5%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 +ID ++ + V+N+ L V + H+A A+ R ++ I ++ Sbjct: 193 TTNIIDVNLLHSITNVLNIFIESTSLQVTEYEYQSLSIHLAIAIERIKKNFYI----DKK 248 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 +A S + L ++L ++F +++ E Y+ ++ + Sbjct: 249 IAPANAPSKY--ATLLIELLEEKFQIQLPDYEREYIDIHILAI 289 Score = 47.5 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 1/81 (1%) Query: 38 RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEV 97 E + H+ +A+ R + I E + S + ++L + FA+++ Sbjct: 325 DEELINSLLVHLNAAVKRLKLEVSIHNPYTEEIKG-NFSGAFAISIELASAIEAGFAIKL 383 Query: 98 NPCEEGYLLANLYGLWMAANE 118 N E ++ ++ + Sbjct: 384 NEDEIAFITLHIQSFLDREAQ 404 >UniRef50_C5DAC1 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. WCH70 RepID=C5DAC1_GEOSW Length = 709 Score = 61.4 bits (148), Expect = 9e-09, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 1/107 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 E ++ K ++ ++N E + ++ + R +G++IE D Sbjct: 194 EQNMVILAELKCILNILNECEKDLNIQFADDVLHHLALRFWLFGKRIVQGKKIE-FDPIE 252 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + Q+ ++A + + L F + E YL +L + Sbjct: 253 KEVIQQTREFEAAKKASKKLESIFQTSIPDDEVYYLATHLLSTKVQY 299 >UniRef50_D1ALQ6 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ALQ6_SEBTE Length = 281 Score = 61.4 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 39/106 (36%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + ++V + E + + + H+ A+ R G+ ++ + L E+ Sbjct: 68 IPAEYIDITEKIVKLAEEKLQMKLSDTIYITLSDHIYFAVKRFGDGQSLKNI---LFWEI 124 Query: 74 AQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 S + + +++ L + E G++ ++ + N Sbjct: 125 KSSYKDEYLIGQEALKIIKDTVDLSLPDDEAGFIALHIVNAELNEN 170 >UniRef50_A8VWD6 Transcriptional antiterminator, BglG n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWD6_9BACI Length = 287 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 5/107 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 +++ + + + +E+E + + H+A AL R+ G +I+ N L E Sbjct: 72 NEERLLAVHEAIARIESEMAIRLPDSALFALTQHLALALQRTTDGTDIQ---NPFLLETK 128 Query: 75 --QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ Q L+KE L + E G++ ++ + E Sbjct: 129 WLYRDSYRLAEQAVHFLMKETGLSLPEAEIGFVTLHIQSALRDSGPE 175 >UniRef50_C9XN38 Putative transcription antiterminator n=6 Tax=Clostridium difficile RepID=C9XN38_CLODC Length = 293 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 41/111 (36%), Gaps = 5/111 (4%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A +D+ + +++ E + + H+A A+ R I+ N+LL Sbjct: 77 ASQVDEKFFEISTEIIAYAEENLNTKLYEYIYVALTDHIAFAIKRYHENITIK---NDLL 133 Query: 71 AELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 E+ ++ + KEF ++ E G++ ++ + + Sbjct: 134 HEIKRIHKKEYEIGKWAVDYINKEFDVKFPVDEAGFIAMHIVNSNYKGSSK 184 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA--ELAQ 75 I K ++ ++ +TH+ R + E+I +NE++ ++ Sbjct: 192 IVKDILNIIRYYYR-VEFKEDDINYDRLLTHLKFFAKRLVKKEKINDTNNEIIDIIKVKY 250 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++ + K + V+ E YL ++ Sbjct: 251 EKDYDCAYKIKTHVEKNYDYYVSQDELLYLTLHI 284 >UniRef50_C2HCM5 Transcriptional antiterminator n=17 Tax=Enterococcus RepID=C2HCM5_ENTFC Length = 306 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 44/111 (39%), Gaps = 5/111 (4%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A I + + +++ + + + H+ +A+ R + G + N LL Sbjct: 86 AQAIPLEYLEISCEIIEYTKEALQVQLNDSVYIALTDHLYTAIERHKMGIFV---PNVLL 142 Query: 71 AELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ Q + + + + ++ ++++ E G++ +L +++ Sbjct: 143 YDIKQLFHKEYAIGKKTVKKISDKYHIKLSEDEAGFIALHLVNAQGIQSQQ 193 Score = 41.7 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 38/94 (40%), Gaps = 6/94 (6%) Query: 21 GMMQVVNVLETECHLPVRSEQGTMA--MTHMASALMRSRRGE--EIEPLDNELLAELAQS 76 + ++N++ + + +TH+ L R GE E+ + EL + + Sbjct: 202 TIQDILNIVRYYYKITFDEDSVHFFRFVTHLRFFLTRVLDGEKSEVGEVSEELFQVIQKK 261 Query: 77 --SHWQAVVQLHQVLLKEFALEVNPCEEGYLLAN 108 + V ++ L + F +++ E+ YL + Sbjct: 262 YKDTFGCVEKIADFLAETFNYQMSTDEKMYLTIH 295 >UniRef50_C5F792 Putative uncharacterized protein n=1 Tax=Lactobacillus paracasei subsp. paracasei 8700:2 RepID=C5F792_LACPA Length = 651 Score = 61.0 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +I + + V++ L+ + Q + H+ + +R + E + + A Sbjct: 189 NLIGSETLRTAQAVLSELQRVTKIEFTEYQYQSLLIHICISTVRIQNAEYLPTWSSASQA 248 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 S L ++L + F ++V E+ YL ++ + Sbjct: 249 ---LSPETSI---LTRLLEEAFNIQVPKSEQEYLNIHILAAKQSK 287 >UniRef50_A8F9J0 Transcriptional antiterminator n=4 Tax=Bacillus RepID=A8F9J0_BACP2 Length = 278 Score = 60.6 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + D+ K +++ T+ + + H+ A+ R ++ IE N L+ E+ Sbjct: 66 VPYDVVKVTEEMIQYAHTKLNRRLNESLHVSLADHIHYAIERLKKNHLIE---NSLIWEI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + + +++ + +E+ E G++ ++ + + Sbjct: 123 KRLYKDEFLVAKDCLEMIEERLHIELPEDEAGFIAMHIINAELNED 168 >UniRef50_D1WYJ0 Transcriptional antiterminator, BglG n=3 Tax=Streptomyces RepID=D1WYJ0_9ACTO Length = 128 Score = 60.6 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 4/115 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + R+ L E G + ++ + + LE E HL V M +H+ A+ R GE Sbjct: 5 LALRIQLFREGGQVKPEVADFVAAELAALEAEGHL-VTEATAAMLTSHLMMAVGRLLNGE 63 Query: 61 EIEPL--DNELLAELAQSS-HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 IE D+++ AELA + +E + E +L +L L Sbjct: 64 PIEQFLTDDQVAAELADHPEAVVRARAVAARAERELGAALPESEINFLGMHLAVL 118 >UniRef50_A8RDI0 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDI0_9FIRM Length = 309 Score = 60.6 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 5/99 (5%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 ++ K ++ E ++ + + H+ A+ R G L N +L E+ Sbjct: 94 PEEYFKLSQSIMEKAMEELNISFQDQTIIALTDHICFAVERYETG---TELPNLVLDEIK 150 Query: 75 --QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + + + +E +++ E GY+ ++ Sbjct: 151 TLYKEEFKIGLWSVKYINQELKIDLPIDEAGYIAMHIIN 189 >UniRef50_B6GAF6 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF6_9ACTN Length = 287 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 37/97 (38%), Gaps = 5/97 (5%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA-- 74 + +++ E H+ ++ + H+ A+ R+R GE N + +E+ Sbjct: 79 EFFNISKSIMDEAEKRLHIVLKDQVLIALTDHIVFAVERARNGE---GFSNLMFSEVRGL 135 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + ++ + + + E ++ ++ Sbjct: 136 YRREYEIGLWGIHLVEEALGIRLPEDEASFIALHILN 172 >UniRef50_Q0TV06 Transcription antiterminator n=9 Tax=Clostridium perfringens RepID=Q0TV06_CLOP1 Length = 282 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 40/101 (39%), Gaps = 5/101 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D+ +++ + + + + H++ A+ R ++GE L N L E+ Sbjct: 75 DEKFIAFCEELILEISRDFSEELNEIIHIGLIDHISFAIERMKKGEI---LRNPFLVEIE 131 Query: 75 --QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++A ++ + L + + E G++ +++ Sbjct: 132 TLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIAMHIHSAR 172 Score = 45.6 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 25 VVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAV 82 V +E ++ V S ++H+ A+ R ++ ++ L ++ Sbjct: 190 AVEYIEDAFNIEVDRTSLSYARFISHLRFAIERLINNTPVKNELLSIIK-LKYPESFKVA 248 Query: 83 VQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ + + ++F+LEV E GYL ++ Sbjct: 249 EEIGKAINEDFSLEVAEDEIGYLALHV 275 >UniRef50_C0QXV4 Transcriptional antiterminator , BglB n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QXV4_BRAHW Length = 620 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 10/109 (9%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 6 NLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 + L E + + ++ ++ + + + ++ ++ R + I Sbjct: 165 DFLYENNM-----NEKLIGIIINFLNKYEIKFSEINLENFIQYINVSISRIKNNNFICSY 219 Query: 66 DNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + +++ ++ S + +L + + E +E N E ++ ++ + Sbjct: 220 EKDIIKDI--SEEIRLSEELIKQIQNEIDIEFNDTEIIFIAIHIASKNL 266 >UniRef50_A4W4E8 Transcriptional antiterminator n=1 Tax=Streptococcus suis 98HAH33 RepID=A4W4E8_STRS2 Length = 392 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNE 68 E ++ +M +V + L + + H+A L R + G ++ Sbjct: 185 VETNLLPDIRFTDLMLIVLDECRDAKLRLSDFVMQNLVLHIALLLQRLKIGSGLDRFP-- 242 Query: 69 LLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + S + ++ + + F + + E Y+ +L Sbjct: 243 IPERIQSSQEYLVAQRIIDRIEETFQVTIPSEEANYIALHL 283 >UniRef50_C3RIK3 Predicted protein n=3 Tax=Bacteria RepID=C3RIK3_9MOLU Length = 226 Score = 60.2 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 6/99 (6%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 + ++ + L + H+ A++R + I P+ N +A Q + Sbjct: 18 ITNIIKNTADDYDLFLSENSINNLSVHLTIAIIRIKSNNYI-PMSNSQIASYKQDHSYPY 76 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 L L +EF ++ E L ++++ N+++ Sbjct: 77 AKMLCDRLAREFEIDFPEAEIS-----LVSMYLSKNQKL 110 Score = 40.9 bits (95), Expect = 0.011, Method: Composition-based stats. Identities = 19/121 (15%), Positives = 44/121 (36%), Gaps = 5/121 (4%) Query: 2 ETRLNLLCEAG--VIDKDICKGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSR 57 +L+L +G ++D + K + + + + + H + H+ AL R Sbjct: 107 NQKLDLEINSGFDLLDDQVFKILRETMYTIYQDYHKDFRNDDKLFVAIGLHLEPALERLA 166 Query: 58 RGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 G+ +E E + E + L+ V+ + L + E ++ + + Sbjct: 167 NGQLVENPLKEKIIE-RHQEEFNYSKILNDVVRHDLNLSFDDDELAFIALHFVVANNRID 225 Query: 118 E 118 E Sbjct: 226 E 226 >UniRef50_C3RJ23 Predicted protein n=2 Tax=Bacteria RepID=C3RJ23_9MOLU Length = 613 Score = 59.8 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 1/104 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +D DI + + +V + + + H+ A R + E +D+E L E Sbjct: 160 QMDFDILQRIRDIVISSIANADYVISDDVLDNLVAHLYIAYYRVMKKEYAN-IDSEWLEE 218 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + + + + +++ K A+E E YL +L G Sbjct: 219 IKEEKEYSLGCAIMELMNKIMAMEYRIEEVAYLTMHLCGKNSKQ 262 Score = 40.6 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 46/114 (40%), Gaps = 8/114 (7%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMT--HMASALMRSRRGEEIEPLD 66 I+++I + +++ ++E ++P +++ H+ + R + G + Sbjct: 263 LSNNYINQEILDIVKEMLMIIEKVANIPFQADLNLQLALSLHLIPLVKRIQYG---TFMH 319 Query: 67 NELLAELAQSSH--WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 N L E+ ++ V+ V+ + F ++ E Y ++ L + + Sbjct: 320 NPLKDEIKSKLIMAYELAVKACVVINQRFNCTLSEDEIAYFALHI-NLSLEQKK 372 >UniRef50_C2BGB6 BglG family transcriptional antiterminator n=2 Tax=Anaerococcus RepID=C2BGB6_9FIRM Length = 698 Score = 59.8 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 1/107 (0%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 +N L + + K ++ ++ E + V + H A + R + I+ Sbjct: 220 INELEDLNLFHKATISQLLIILLDEIREYGISVNDYAIQNLVIHFALVIERVKINCLIDN 279 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 D ++ + + + K FA+++ E+ Y+ L Sbjct: 280 YDKDIAKG-EGDEFLDFAKSVIRRISKSFAIDLPIEEKKYIYLQLLS 325 >UniRef50_B1IKY9 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=B1IKY9_CLOBK Length = 285 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +D DI +V++++ E + P+ + H++ + R IE + E Sbjct: 74 VDSDIIGLCEEVISMISDELNEPLNEKIHVSLTDHISYTIKRLMENNSIEN-PFLVETET 132 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + ++L L + E G++ +++ Sbjct: 133 LYKREFAIAKKAVRMLEDRLNLVIPDEEAGFITLHIHSAR 172 Score = 49.8 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query: 25 VVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS--SHWQ 80 ++ +LE E ++ + +TH+ A+ R I+ NELL + ++ Sbjct: 190 IIELLEDELNMEIDKSSLDYARFLTHIRFAIERILNNTPIK---NELLTAIKNQYKISYK 246 Query: 81 AVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ +++ E ++ V+ E Y+ ++ Sbjct: 247 LAKKVSKIIEDELSVNVSKEETAYIAIHI 275 >UniRef50_B6FWC4 Putative uncharacterized protein n=2 Tax=Clostridium RepID=B6FWC4_9CLOT Length = 985 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 2/109 (1%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E R + + ++ + M +V+ V++ + V + + TH+ A+ R R + Sbjct: 488 ENRKKIHIMSENLNPETINIMNKVITVIKNQYRF-VNNGLYMVLATHIEEAIKRVRNEKN 546 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 I + + E S + + ++ + + E GY+ +Y Sbjct: 547 IINPSLDNIKE-NMSEEYDLARYVVTIIENIAKISLPEDEIGYIAYYIY 594 >UniRef50_P26212 SacPA operon antiterminator n=9 Tax=Bacillus RepID=SACT_BACSU Length = 276 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + ++ + +++ E E P+ H++ A+ R + G ++ N+LL Sbjct: 61 QTLPEEHIEIAEDIISYAEGELAAPLSDHIHIALSDHLSFAIERIQNGLLVQ---NKLLH 117 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 E+ ++ + + + + + E GY+ +++ M Sbjct: 118 EIKALYKKEYEIGLWAIGHVKETLGVSLPEDEAGYIALHIHTAKM 162 Score = 53.3 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 4/93 (4%) Query: 21 GMMQVVNVLETECHLPVRS--EQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--S 76 + +++ ++ + V +TH+ A+ R E + +D E+L + + S Sbjct: 176 MIKEMIEKIKQYFNRKVDENSISYQRLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYS 235 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 +Q ++L + L E+ L + E GY+ ++ Sbjct: 236 FAYQCALELAEFLKNEYQLHLPESEAGYITLHV 268 >UniRef50_A4J1C8 Transcriptional antiterminator, BglG n=2 Tax=Clostridiales RepID=A4J1C8_DESRM Length = 282 Score = 59.8 bits (144), Expect = 3e-08, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 5/108 (4%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L +D + ++ + + + + H+ L+R +G EI+ N Sbjct: 67 LALMEQVDPAVINVTQNIIELAKAQLGEGLHPRVHVALADHINFTLIRLAQGMEIK---N 123 Query: 68 ELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 LAE+ + Q ++L++ + + P E G++ +L+ Sbjct: 124 PFLAEIEAMYPKEFSIAKQGAVLILEKMNIFIPPEEIGFIALHLHSAR 171 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 3/92 (3%) Query: 20 KGMMQVVNVLETECHLPVRS--EQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + + + V +E++ + T ++H+ S + R IE + L + S+ Sbjct: 184 EVINRAVKYIESQFGPIKEHGGLEYTRLLSHLQSCIHRLVNKTTIENPFLDKLKQ-EFSN 242 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ Q+ +L + + V E GYL ++ Sbjct: 243 SYEIARQMSNILEEGLGIPVPEDEIGYLAMHI 274 >UniRef50_B4F212 Transcriptional antiterminator n=14 Tax=Bacteria RepID=B4F212_PROMH Length = 284 Score = 59.4 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 45/111 (40%), Gaps = 8/111 (7%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L+LL I D + ++ + + L + + H+ +++ R + G I Sbjct: 60 LDLLSN---ITLDYVEIADNIIQYAKEKMTLDTQDSIYIALIDHIQASIERYKEGTFIR- 115 Query: 65 LDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 N++L E+ S + + +++ F + + E G++ ++ + Sbjct: 116 --NKILWEIKNFYSEEFDIGLYGLKLINDRFNISMPEDEAGFIALHIASIR 164 >UniRef50_B0K352 Transcriptional antiterminator, BglG n=9 Tax=Thermoanaerobacterales RepID=B0K352_THEPX Length = 275 Score = 59.4 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 14/111 (12%), Positives = 41/111 (36%), Gaps = 1/111 (0%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 ++ I D+ +++ + E + H+A A+ R G EI Sbjct: 56 NKIKFSELMEKIRGDVIGIAEEIIAMAEKIKGKKLNEHIHIALADHIAFAIERINMGIEI 115 Query: 63 EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + + L + + ++ +++ + + + E G++ +L+ Sbjct: 116 KNPFDIEIKALYKDD-YNIALKALELINQRLNISLPEDEAGFIALHLHAAL 165 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 20 KGMMQVVNVLETECH--LPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS- 76 + + Q+V+ +E + S +TH+ A+ R + + NELL + + Sbjct: 178 RLVSQLVSTIEKHLGKYIDRDSIDYIRLVTHLRFAIDRVEKNAPVT---NELLVSIKKKF 234 Query: 77 -SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + +Q+ +++ +V E GY+ ++ Sbjct: 235 KKAYNIAMQVSKIIEDTLQKKVPEEETGYIAIHI 268 >UniRef50_Q2BFG3 ManR n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFG3_9BACI Length = 645 Score = 59.4 bits (143), Expect = 4e-08, Method: Composition-based stats. Identities = 11/108 (10%), Positives = 32/108 (29%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + + + + ++ + E + H + R+R+ + ++ + Sbjct: 184 DLFQPYEIDIVRKALKEIQNNESIRFTDEALDSLVVHALIMIKRTRQRAPV-FVEPAEME 242 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++A ++ L F L E Y + + E Sbjct: 243 KIALRKEYEYASAFFTRLADSFQLSFPEAEIVYYTWHFISAKRSEEAE 290 Score = 44.0 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 8/105 (7%) Query: 10 EAGVIDKDICKGMMQVVNVLETE---CHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLD 66 E+ +I + + ++Q++ + + HM S + R G I Sbjct: 290 ESALIQDEKAEHVVQLLIERMEKLTLFPFGNDHILASGLAVHMHSVISRIHYGFPIT--- 346 Query: 67 NELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 N LLA + + + V+ + + F + + E Y++ + Sbjct: 347 NPLLANIKRMYPYMFSMVILALDDIREGFHISIPEDEAAYIVLHF 391 >UniRef50_A6M213 Transcriptional antiterminator, BglG n=8 Tax=Clostridium RepID=A6M213_CLOB8 Length = 284 Score = 59.1 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +D++ ++++ + E + + H+ A+ R EEIE N L E+ Sbjct: 73 VDEEFFVLCEKMISYVANELKENLDERIHVALVDHLNFAVKRLSDKEEIE---NPFLMEI 129 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + ++ +VL E +++ E G++ +++ + Sbjct: 130 RALYPQEYSLAEKVAEVLQNEKKVKIPEGEIGFIALHIHSARNSGK 175 Score = 41.3 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 38/94 (40%), Gaps = 7/94 (7%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS- 76 + ++ +E + + + +TH+ A+ R IE N+ + E+ Sbjct: 184 HLINSIIEYVEAKTEIKIDKTSLDYARFLTHLRFAIKRILDDISIE---NDFIKEIKSKY 240 Query: 77 -SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ + ++L+ + +V+ E YL ++ Sbjct: 241 KLSYKVSKGVAKILVLKLEKKVSDDEIAYLAMHI 274 >UniRef50_Q184U4 Putative transcription antiterminator n=5 Tax=Clostridium difficile RepID=Q184U4_CLOD6 Length = 514 Score = 59.1 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 1/101 (0%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + + Q+ + E + H+A + R I L EL + Sbjct: 202 DFEKLSQITLHTLQVEKSNLSDEYYINFLIHIAICIKRISIKRYIN-LSEGFFRELLEHE 260 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 +++ L L + F +E E Y+L ++ GL + + Sbjct: 261 YFEKSKILCANLSEAFDVEFIDEEVCYILLHIEGLLKSIKK 301 >UniRef50_B1YKV9 Transcriptional antiterminator, BglG n=2 Tax=Exiguobacterium RepID=B1YKV9_EXIS2 Length = 285 Score = 59.1 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G +D++ M ++V+++ET V H+ R +G E+ N LA Sbjct: 70 GHLDENFIALMNEIVSMIETRFGKRVDEHIHIGLTDHLTFTFKRLEQGMEVT---NPFLA 126 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 E + ++ + + E + P E G++ +++ Sbjct: 127 ETEALYPEEYALAEEIVEFISAEMNFYLPPAETGFIALHIHSA 169 Score = 42.9 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 5/89 (5%) Query: 25 VVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLD--NELLAELAQSSHWQ 80 + + +E + + + + H+ SA+ R GE +E + +LL E + Sbjct: 188 IASHIEQRLQIKIDRKSLDYKRLIRHLRSAIERVSNGEYLEAPEKVEKLLRE-EYPLCYD 246 Query: 81 AVVQLHQVLLKEFALEVNPCEEGYLLANL 109 +L ++ ++ V E YL +L Sbjct: 247 TAWELMSIMERQLKKAVPRGEATYLTMHL 275 >UniRef50_B0MGK7 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0MGK7_9FIRM Length = 507 Score = 59.1 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 19 CKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIE-PLDNELLAELAQ 75 + Q++ +E P ++ M H+ AL R R G + PL++++ Sbjct: 312 LDLVTQLIARVEERFGFPYSEDENLAENLMLHINMALERIRSGMNVSNPLNDDIYQS--H 369 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 + V Q + ++ V E GY++ Sbjct: 370 PKLYDIVKQSFIEVFNHTSVPVPDDEIGYIVI 401 >UniRef50_A6TMP5 Transcriptional antiterminator, BglG n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TMP5_ALKMQ Length = 163 Score = 59.1 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 5/98 (5%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 +I +++ + E + + + T + H+ A+ R + G I N L E Sbjct: 59 DEIVGVSEEIIVMAEKQLGESLGDKVHTGLIDHIHFAINRIQEGINIS---NPFLNETKA 115 Query: 76 --SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + Q +L ++V E G++ ++ Sbjct: 116 LYPVEFSIASQAVALLCVRLGIDVPQDEIGFIALHIRA 153 >UniRef50_C0D1K5 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1K5_9CLOT Length = 273 Score = 58.7 bits (141), Expect = 5e-08, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 48/106 (45%), Gaps = 6/106 (5%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L ID + +++ E P+R + H+A A+ R++ G E L N Sbjct: 60 LQAVNGIDPVYIEVTARIIEAAEGLLG-PIRHDILIAMADHIALAVSRAKEGCE---LPN 115 Query: 68 ELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ S ++A ++ +++ +E +E++ E Y+ +++G Sbjct: 116 PFSQDIRALFSQEYEAALKGRELIRQELGVEISEDEVSYITLHIHG 161 Score = 42.1 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 39/97 (40%), Gaps = 3/97 (3%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++ + + + +E + + + M+H+ + R+R+ E+ L+ A Sbjct: 171 SLELARLVQDGIRQVEEGMGMTLPAASLGYNRLMSHLRYMIARTRKKEQ-TNLNMGDYAR 229 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ Q+ + + ++ V E G+L ++ Sbjct: 230 ENFPRAYEVAAQVCEDIGRKLKCPVAQEEIGFLAIHI 266 >UniRef50_O07655 Antiterminator homolog n=16 Tax=Enterobacteriaceae RepID=O07655_ECOLX Length = 293 Score = 58.7 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 E + L +D + ++V E + + H+++A+ R G + Sbjct: 71 EQKNKLYKLIEHVDIEYVSVAEKIVQYAEKNLEKNLNPSLLLILADHISNAISRVVSGIQ 130 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 I + + + L ++ + ++ ++F++++ E G++ ++ Sbjct: 131 INNVFLDEIKALYKA-EYAISRDALTIINEQFSVQLPDDEIGFIALHILN 179 >UniRef50_Q03E27 Transcriptional regulator with AAA-type ATPase domain and a DNA-binding domain n=29 Tax=Bacilli RepID=Q03E27_PEDPA Length = 976 Score = 58.7 bits (141), Expect = 6e-08, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A ++DK I QV +E + + H++S + R + G+ + + N+L+ Sbjct: 486 AEIVDKGIIDFAKQVQPKIENQLDYHFKENFIYAMSLHISSFIKRIQSGKPMRLMGNDLV 545 Query: 71 AELAQ-SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 A + + ++L + + + + E YL L L Sbjct: 546 AMVKDYPEELAVAKSIKEMLEQRYGMPIPESESYYLAVLLISLR 589 Score = 42.1 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 1/87 (1%) Query: 20 KGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + V+ L + + H+A A+ R +E E LA + + Sbjct: 873 DILWNYVDYLAETKKVEFSESFRINLIMHIAGAVERMLTNNPMETAPEE-LAAVQDEVWF 931 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLL 106 + + + L+ +E+ P EE Y+ Sbjct: 932 KLIQKADDKYLRRIQIEMTPSEEFYVY 958 >UniRef50_B7GIF9 Transcriptional antiterminator n=3 Tax=Bacillales RepID=B7GIF9_ANOFW Length = 281 Score = 58.3 bits (140), Expect = 7e-08, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +D++ M +++ ++ + + H+ A+ R +G +I+ N L E Sbjct: 70 VDEEFIGLMNDIIHHIQKRTNSSLNEHIHVALTDHILFAIKRLEQGMDIK---NPFLVET 126 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + ++ +L + +++ E G++ +++ Sbjct: 127 KSLYPLEYDVATEVVNMLNERLRIQLPEGEIGFIALHIHSALTNHQ 172 Score = 39.0 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLD--NELLAELAQ 75 + + ++V+V+E + + + E + H+ A+ R ++GE++E + +L E Sbjct: 181 QLISRLVSVVEKQLDIRIDRESIHYLRFVRHLRYAIERVKKGEKMEEPKKLSNILKE-TY 239 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + +L +++ + L V+ E YL +L Sbjct: 240 PLCYNLSWKLIKIMQQTLQLPVDEAEAVYLTLHL 273 >UniRef50_P15401 Levansucrase and sucrase synthesis operon antiterminator n=2 Tax=Bacillus subtilis group RepID=SACY_BACSU Length = 280 Score = 58.3 bits (140), Expect = 8e-08, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 41/104 (39%), Gaps = 5/104 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + +D + Q+++ E E ++ + H++ A+ R G I+ N LL Sbjct: 63 ETLPEDHIQISEQIISHAEKELNIKINERIHVAFSDHLSFAIERLSNGMVIK---NPLLN 119 Query: 72 ELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 E+ +Q + ++ + + + E G + +++ Sbjct: 120 EIKVLYPKEFQIGLWARALIKDKLGIHIPDDEIGNIAMHIHTAR 163 Score = 50.6 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 34 HLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--SSHWQAVVQLHQVLLK 91 ++ + +TH+ A+ + GE I LD E++ + + + + + + K Sbjct: 193 NIVEDTISYERLVTHLRFAIQHIKAGESIYELDAEMIDIIKEKFKDAFLCALSIGTFVKK 252 Query: 92 EFALEVNPCEEGYLLANL 109 E+ E E Y+ ++ Sbjct: 253 EYGFEFPEKELCYIAMHI 270 >UniRef50_B0K7D9 PTS system transcriptional activator n=12 Tax=Clostridia RepID=B0K7D9_THEP3 Length = 979 Score = 57.9 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 14 IDKDICKGM--MQVVNVLETECHL------PVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 I K KG+ ++V E + + H+++ R G+ I + Sbjct: 485 ISKKDLKGIVGEKIVEAAEKAYEIAKKSFSRLEENLFYSLAIHLSATYERILSGKPI--I 542 Query: 66 DNELLAELAQSS-HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + +L + + + + + + +E +E+ E G++ L Sbjct: 543 NPQLENIIREYPAEYSTAKIMAKQIERELGIELPEEEIGFIAMYLRT 589 >UniRef50_C5RLN3 Transcriptional antiterminator, BglG n=1 Tax=Clostridium cellulovorans 743B RepID=C5RLN3_CLOCL Length = 280 Score = 57.9 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 11/106 (10%), Positives = 37/106 (34%), Gaps = 3/106 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA-E 72 +D + + ++ + + + H+A + R + G I+ + L + Sbjct: 71 VDSSLIGATEEAISYISKVTESDLGKIIHITLLDHLAFTIERIKNG--IKIGNPFLYETK 128 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + + + +++ LE+ E G++ +++ Sbjct: 129 VLYEKEFSIAEDVLEIINDRMNLELPKAEVGFIAMHIHAALNNQKS 174 Score = 53.3 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 41/101 (40%), Gaps = 7/101 (6%) Query: 21 GMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS-- 76 + +++ V+E ++ + E +TH+ A+ R + IE + LL + Sbjct: 183 IIQEMITVIENNLNILIDRESISYMRLLTHLRFAIDRINKKLPIENI---LLDSIKTQLK 239 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + + + + + F L + E GY+ ++ + + Sbjct: 240 DSYMVAIAVADYVKENFNLVMPEEEIGYIAVHIGNIKLRQK 280 >UniRef50_C7UQ76 Predicted protein n=3 Tax=Firmicutes RepID=C7UQ76_ENTFA Length = 285 Score = 57.9 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 40/99 (40%), Gaps = 5/99 (5%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + + + + ++ E + H+ AL R ++G+ I N LL E+ + Sbjct: 67 ESLFEIVRSIILRAEELFQKKATDYLYLTLLDHIDYALKRGKKGQYIS---NPLLWEVRR 123 Query: 76 --SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 +Q V++ + L KE+ + E + +L + Sbjct: 124 YYPKSYQLGVEVVERLNKEYNVSFPEDEAASIALHLVNI 162 Score = 44.8 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 47/100 (47%), Gaps = 4/100 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++ + + M +V++++ P+ E T M H+ + R + D+EL + Sbjct: 172 NEKVTEIMKDIVSIVQYHLGAPMNHESINYTRFMQHLQYFVQRILTNDTYSENDSELYQQ 231 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 ++Q + AV ++ ++ F ++ E+ YL+ +++ Sbjct: 232 ISQLYPEAYGAVKKIELYVIGTFGKLISEDEKTYLMMHIH 271 >UniRef50_P26211 Beta-glucoside operon antiterminator n=72 Tax=Bacteria RepID=ARBG_ERWCH Length = 283 Score = 57.9 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 48/119 (40%), Gaps = 7/119 (5%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + RL+ + E I ++ +++ + + + +++ H A+ R R+G Sbjct: 55 LTARLSDVLER--IPLEVVTTADRIIALAKEKLGGNLQNSLYISLTDHCHFAIERHRQGV 112 Query: 61 EIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 +I N L E+ + + + ++ + + + E G++ +L + ++ Sbjct: 113 DIR---NGLQWEVKRLYQKEFAIGLDALDIIHRRLGVRLPEDEAGFIALHLVNAQLDSH 168 >UniRef50_A6VMZ3 Transcriptional antiterminator, BglG n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VMZ3_ACTSZ Length = 280 Score = 57.9 bits (139), Expect = 1e-07, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 44/107 (41%), Gaps = 5/107 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I ++ + VV+ + + + H+ A+ R+++ + + N LL E+ Sbjct: 67 IPQEYFQLTNCVVDFANQQLGTTLSNSIFVSLPDHIFHAVERAKQNQTV---PNGLLFEI 123 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + + + Q++ K F +++ E G++ +++ + Sbjct: 124 QRLYKQEFAIGLYTLQLIEKRFGVQMTEDEAGFIALHIFNARTDGST 170 Score = 38.6 bits (89), Expect = 0.066, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Query: 20 KGMMQVVNVLETECHLPVRSEQGT--MAMTHMASALMRSRRGEEIEPLDNELLAE--LAQ 75 + + ++N++ +L + +TH+ R E D+ L + +A Sbjct: 179 QMIKDILNMVGYHFNLVLDENSYDYARFLTHLQHFAQRFFVNSEPASGDDFLYRQTKIAY 238 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 +Q V ++++ L + +N E+ YL+ ++ + Sbjct: 239 PKAYQCVEKINKYLTANYHKPLNEDEQLYLMIHIRRIISHQQ 280 >UniRef50_C9ADA7 Transcription antiterminator n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9ADA7_ENTCA Length = 669 Score = 57.5 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Query: 31 TECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLL 90 + L + + H+ A+ R + G EI+ E A LAQ +Q+ +++ + + Sbjct: 202 RKYFLKLSDFMIYTIVLHIGLAIKRLQAGFEIQLHPQE--ANLAQEVEYQSALEIVEKIR 259 Query: 91 KEFALEVNPCEEGYLLANLYGLWMAAN 117 ++ + + P E Y+ +L ++ Sbjct: 260 QQMGIVLPPEEAFYIAIHLKNKLVSET 286 >UniRef50_O31691 PtsGHI operon antiterminator n=87 Tax=Bacillaceae RepID=GLCT_BACSU Length = 281 Score = 57.5 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 40/102 (39%), Gaps = 5/102 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +D+ + V+ + + + H+A A+ R ++G + + N L E Sbjct: 70 VDEKLVDISNDVIYHISNRTNHSLNEHIHIALTDHIAFAIKRQQQGFD---MKNPFLMET 126 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +Q ++ ++ ++ L + E G++ +++ Sbjct: 127 QSLYPEEYQIAKEVIDMINEKAGLCLPEGEIGFIALHIHSAL 168 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 3/101 (2%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDN-ELLAELAQS 76 + M Q+V V+E + V E + H+ + R ++ E + + LL + Sbjct: 181 QLMAQLVEVIEDSFQMKVNKESVNYLRLIRHIRFTIERIKKEEPTKEPEKLMLLLKNEYP 240 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + +L ++L + V+ E YL +LY L + Sbjct: 241 LCYNTAWKLIKILQQTLKKPVHEAEAVYLTLHLYRLTNKIS 281 >UniRef50_D2EH42 Transcription antiterminator licT n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EH42_PEDAC Length = 283 Score = 57.5 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 40/103 (38%), Gaps = 5/103 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + + +++++ E + + H+ + R +G+ + N L Sbjct: 64 NEVTSEELLVTSKIISMARQELKVKLSESIYISLTDHIHYVIERYHQGKL---MTNTFLW 120 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++ + ++ ++ ++ K+F +++ E GY+ + Sbjct: 121 DIKRYYPKEFEVALKAVHLINKKFNIKLKDDEAGYIAFHFINA 163 >UniRef50_UPI0001692E24 transcriptional regulator n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692E24 Length = 691 Score = 57.5 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 1/108 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +I +D + + + ++ E P M ++A L R G+E+ LD Sbjct: 189 DLIARDKLEMIDSALGEIDKELMAPFADTSYLYFMVYLALMLKRLELGQELS-LDATSKE 247 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ + ++ + + + F +E+ E + + E Sbjct: 248 AAKRAPEYNVAEKIFRHIAETFGVELPEDEACGFTPYIKSGKLRKPSE 295 Score = 41.3 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 42/101 (41%), Gaps = 9/101 (8%) Query: 17 DICKGMMQVVNVLETECHLPV-RSEQG-TMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 ++ + ++V+ E + H + ++H+ ++ R R ++ N L ++ Sbjct: 304 ELSTLVYELVSYCEQKLHADLLSDRNLMQGLVSHLEPSIYRIRENIIVQ---NPYLDQIR 360 Query: 75 QSSHWQAVVQLHQVLLKEF--ALEVNPCEEGYLLANLYGLW 113 + V Q+ + + + ++V E G+L+ ++ Sbjct: 361 SD--YAHVYQIVEEAVHQVMPQVKVPDDEIGFLVMHIAASL 399 >UniRef50_UPI0001788D94 transcriptional antiterminator, BglG n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788D94 Length = 696 Score = 57.1 bits (137), Expect = 1e-07, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + + ++++ E + + E + R + + + +D++ + L ++ Sbjct: 195 LEQVYRLISDSEITLGVDLTDEMLFHLTARFLLYVRRIQTAQWVS-IDDDERSVLRRTPE 253 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 ++A ++ + L + F + V E Y +L G + E++ Sbjct: 254 YEAAARIAEGLGQMFGVSVPDDEVCYFAMHLLGARVNRMEQM 295 Score = 44.0 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 11/113 (9%) Query: 15 DKDICKGMMQVVNVLETECH------LPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNE 68 +++ K + V + LP R + H+ A R G L+N Sbjct: 298 SEEVLKQLRNVTTEMTDHFQRYACVFLPNREAMEENLLVHLKPAYYRILYG---LSLENP 354 Query: 69 LLAELAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 LL + ++ + + +++ E GYL + G N + Sbjct: 355 LLENIRSKYGEVFELTRRSAAPFEQLVGRKLDDHEIGYLAMHFGGWLRRENTK 407 >UniRef50_B0PCB1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCB1_9FIRM Length = 305 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 5/98 (5%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ- 75 + + +++ + H++ +++R R+ N LLAE+ + Sbjct: 96 EHIEVTNRIIAYARKILGKRLNHSIYITLTDHISFSVLRFRQNMM---FHNALLAEMRRF 152 Query: 76 -SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + ++ KE + E + ++ Sbjct: 153 YPQEYSIGQYALDLIAKELGVRFPDDEAASIAMHIVNA 190 >UniRef50_C8P1J6 Putative uncharacterized protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1J6_ERYRH Length = 641 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 33/100 (33%), Gaps = 2/100 (2%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + +++ + L + H+ AL R +G+ L N + S+ Sbjct: 192 MDIIERIIVTCIQKYQLHLTDIGFKNLSIHIEIALTRIEQGKL--GLSNTTTSINTDSNA 249 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + L +L + L++ E + +L + Sbjct: 250 YLCAEALAVMLEEALTLKIPESEIINIYIHLSSQKKLHTD 289 Score = 44.4 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 7/109 (6%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + + + ++ + R ++ MTH+ SAL R G I NELL E Sbjct: 297 SPHNLQILNEALDDIYRIYGSDFRHDEILKQGLMTHLESALKRIELGLSIR---NELLDE 353 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + Q L LK A+ N E G+L + G A ++ Sbjct: 354 IEKNYPFEIQIAKVLAFHFLKTNAIAFNLDEVGFLALHFCGARERARQD 402 >UniRef50_B1CBZ7 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBZ7_9FIRM Length = 716 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 2/95 (2%) Query: 20 KGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHW 79 + ++ + LE E E + + H++ + R R ++ + E L S + Sbjct: 206 EFLIGQIQHLEKELGEIFSDETFSSLLIHLSIIVYRVSRNCSLKEITGET--TLNNSIEY 263 Query: 80 QAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 Q+ + + F + + E Y +L G + Sbjct: 264 TLTSQIIENINTRFTITIPSEEIYYFTVHLLGAKV 298 Score = 38.6 bits (89), Expect = 0.053, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 40/108 (37%), Gaps = 3/108 (2%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLA 71 +I ++I M++ + L + + +TH+ + R + + I P+ E+ Sbjct: 313 IIIRNIATKMVEEIGNLYAVDFKEKKEDVIDGLITHLIPTVYRIKYKKRILNPIYPEM-- 370 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 E S + + L + E+N E Y+ + + E Sbjct: 371 EQKYSDLLGNTKIVCRHLSEYCKEEINEQEVSYIAMHFLAALHSKLNE 418 >UniRef50_C6PVA3 PTS system transcriptional activator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVA3_9CLOT Length = 915 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 5/100 (5%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++DK I + + +++ + + H++S++ R + L N L E Sbjct: 451 IVDKRIINIVEKFLDIASKKMKKVFPVKIFYGLCLHISSSIERIIHNKN---LINHNLNE 507 Query: 73 L--AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 + ++ + L L EF +++ E ++ L Sbjct: 508 IVEKDREEYKLALILVDKLEDEFNIKIPSEEIEFIAMFLC 547 >UniRef50_C0CT65 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT65_9CLOT Length = 281 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 41/100 (41%), Gaps = 5/100 (5%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + +++ ++ H + + H++ L R + GE+I N L+E+ Sbjct: 72 PEFVDFCEELILLIARSFHEELHETIHISLIDHISCTLRRLKLGEQIV---NPFLSEIEA 128 Query: 76 --SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 +Q ++ + + + + + + E G++ +++ Sbjct: 129 LYDQEFQIAGEVCRRIEERYDVSMPEGEVGFIALHIHSAR 168 >UniRef50_A7GGX3 Transcriptional antiterminator, BglG family n=12 Tax=Clostridium RepID=A7GGX3_CLOBL Length = 275 Score = 57.1 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 5/100 (5%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE- 72 ID I +++N E + + H+ AL R +G IE N L E Sbjct: 68 IDNKIVGISEEIINFSEKALNTKLNEGVHISLPDHINFALRRIEKGINIE---NPFLEEL 124 Query: 73 -LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + ++ ++ ++ + + + E G++ ++ Sbjct: 125 GIIYPKEYEIAMKALNMINERLKVNLPKDEAGFICLHIRA 164 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLAELAQSS 77 +M++++ L+ + L S +TH+ + R + + I L + + E+ Sbjct: 181 ISKVMELISKLKGK-PLDKNSLSYVRTLTHLNFMIERVKEDKTIKNELLDSIKEEMKS-- 237 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + +++ ++ K F +++ E GY+ +L Sbjct: 238 EFSIAIKVAMLIEKLFEIKIPEDEIGYIALHL 269 >UniRef50_C6PDR4 PTS system transcriptional activator n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PDR4_CLOTS Length = 899 Score = 56.7 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 37/100 (37%), Gaps = 1/100 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 ++ +DI ++ ++ + T H+ + + R + + I + Sbjct: 435 HILGEDIINITDRIAELVSELLGKELSQNSYTALALHLNTLIERVNKNKPIVNPQLSKIK 494 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 +L ++ V+ +++ K + + E G++ L Sbjct: 495 QLY-PREFEVAVEAKKIIEKYLNVSIPEDEAGFITIFLIS 533 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 37/92 (40%), Gaps = 4/92 (4%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE-IEPLDNELLAELA 74 +++ + + L + + + H A + R ++GE+ IE + E + Sbjct: 796 EELYSDIQDTIMKLCDTLSVCFDDDMLLGIILHFAFMVSRIKKGEKSIEYIGKEEY--IK 853 Query: 75 QSSH-WQAVVQLHQVLLKEFALEVNPCEEGYL 105 + + AV + L ++++ + E Y+ Sbjct: 854 NNKSLYNAVKKALTHLNTKYSIIIPDDEICYI 885 >UniRef50_D1B6P9 Transcriptional antiterminator, BglG n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6P9_THEAS Length = 285 Score = 56.7 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 1/111 (0%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 + RL ID + Q + ++E +P+ H+ A+ R R G Sbjct: 55 KERLRYAKVLAEIDGSFAALVAQGIAIMEDHLGVPLGERIHASLTDHLFFAVKRLREGIA 114 Query: 62 IEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + +A + A + + L +E L++ E ++ +++ Sbjct: 115 VRNPFAREVAAMY-PKEHAASQAMLRWLSEEVHLDMPDDEAAFVALHVHSA 164 Score = 47.5 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 39/107 (36%), Gaps = 11/107 (10%) Query: 20 KGMMQVVNVLETECHLPVR--SEQGTMAMTHMASALMRSR-------RGEEIEPLDNELL 70 + + ++V + E + S + H++ ++ R G+ I L+ + Sbjct: 178 RVISELVAITEESLGFRLDRLSPHYMRFIRHLSFSIDRVEGGIEGDLEGDPISTLEETMK 237 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 E + ++L + + P E YL +++ L+ + Sbjct: 238 RE--NPVPYGIALKLCLYMRNALDRPIPPAEVVYLTIHIHRLYNSKQ 282 >UniRef50_A6LWC3 Sigma-54 factor, interaction domain-containing protein n=4 Tax=Clostridia RepID=A6LWC3_CLOB8 Length = 995 Score = 56.4 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 40/98 (40%), Gaps = 2/98 (2%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 +ID+ I + +V ++ + ++ H+ S R ++G + +++ + Sbjct: 514 NIIDEKILNVVEKVTDIAKQYIE-NIQENFYYCVAMHLNSTYERLKQGRIVRNPESDYIK 572 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + ++ L + + +E+ E G++ L Sbjct: 573 K-EYYNEYRIAKILTKEINNSLDIELPEDEIGFIAMYL 609 >UniRef50_UPI0001C4223B transcription antiterminator GlcT n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C4223B Length = 278 Score = 56.4 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 39/103 (37%), Gaps = 1/103 (0%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +D+ + + +++ +++ E P+ H+ A+ R +G EI E+ Sbjct: 70 LDEALIVHINEIIRMIQRELPKPLYERIHLALTDHIQFAIRRLEQGIEISN-PFLTETEM 128 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 + + + L +E+ E G++ ++Y Sbjct: 129 MFPNEFHLARKAVDYLNAHLTVELPEAEIGFVALHIYSASSNQ 171 >UniRef50_B9Y2S2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2S2_9FIRM Length = 632 Score = 56.4 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 13/109 (11%), Positives = 42/109 (38%), Gaps = 3/109 (2%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 ++ L + + + V+ ++ + ++ + H+ A+ R I Sbjct: 173 IDFLPQETMYKSSQLSLIQHVIAESLMNANISITADSCSALSLHILIAINRVETNNLI-- 230 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + E+ + QS ++ + +++ + + F + + E Y ++ G Sbjct: 231 -NQEVSEAMRQSLEYKTAIDINRSIEEIFHVSLPEAELCYFAFHINGKK 278 >UniRef50_Q8XP92 Probable transcription antiterminator n=1 Tax=Clostridium perfringens RepID=Q8XP92_CLOPE Length = 194 Score = 56.4 bits (135), Expect = 3e-07, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D+ +++ + + + + H++ A+ R ++GE L N L E+ Sbjct: 75 DEKFIAFCEELILEISRDFSDELNEIIHIGLIDHISFAIERMKKGEI---LRNPFLVEIE 131 Query: 75 --QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLL 106 ++A ++ + L + + E G++ Sbjct: 132 TLYPKEFEAATKMVKKLEDFTGVSIVDDEIGFIA 165 >UniRef50_D0KIH3 Transcriptional antiterminator, BglG n=13 Tax=Bacteria RepID=D0KIH3_PECWW Length = 313 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 43/101 (42%), Gaps = 5/101 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + ++ + ++++ + H + + + H++ A+ R R+G I+ N LL E+ Sbjct: 101 VREEYVHIVNKIIDDANRQLHGRLSEQVFFTLIDHISFAIERYRKGISIQ---NRLLYEV 157 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + + + ++ LE+ E G + +L Sbjct: 158 KRFYPQEFAIASRALNDINQQMTLELPEEEAGNIAFHLVNA 198 Score = 42.9 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL- 73 K + + N+++ H+ + E + +THM + R I D+ + ++ Sbjct: 210 QSVKMLKDIFNIIQYNFHIVIDKESINYSRFLTHMQFFIQRLLENSLIHSNDDFIFDQVT 269 Query: 74 -AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 ++ + + ++++ E YL+ ++ Sbjct: 270 KEYPDAYKCSRLIKDYIHNLLNIDISNDEMLYLIIHIV 307 >UniRef50_B2ISN0 PTS system, IIB component n=15 Tax=Streptococcus pneumoniae RepID=B2ISN0_STRPS Length = 659 Score = 56.0 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 24 QVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVV 83 ++V E +L + + H+A +++R + G EI+ +D ++ + + Sbjct: 202 RIVLDECQEANLKLSDFVLQNLVVHIALSVIRLKSGFEIKNIDCQMTDDAIERK---VAQ 258 Query: 84 QLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + + E E Y+ +L Sbjct: 259 RILSKVREVTNQEFPVQEIDYITLHLLA 286 >UniRef50_A1JND6 Beta-glucoside operon antiterminator n=3 Tax=Enterobacteriaceae RepID=A1JND6_YERE8 Length = 277 Score = 55.6 bits (133), Expect = 4e-07, Method: Composition-based stats. Identities = 11/100 (11%), Positives = 45/100 (45%), Gaps = 5/100 (5%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + +++ ++ +V T+ + + H++ A+ R+++G + + LL ++ Sbjct: 66 LPEELFDIVLDIVKQATTKLDRKIHKSVYASLLDHISFAIERAKQGVHVRNM---LLWDI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + + + + ++ +++ E G++ +L Sbjct: 123 KRLYRNEFIIGISALENIKQKLNVDLAEDEAGFIALHLLN 162 Score = 38.3 bits (88), Expect = 0.089, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 +++ K + ++N+++ ++ E +TH+ R + DN L + Sbjct: 173 ENVSKVIQDLLNIVKYHFNIEYEEESINFQRFVTHLKFFSHRLLSNTYVMTNDNSLHDVV 232 Query: 74 --AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 S+ ++ ++++ + ++ E+ E +L ++ Sbjct: 233 AEKYSTSYECTKKINKFIKHDYGRELTSDEMMFLAIHI 270 >UniRef50_C6PFM7 PTS system transcriptional activator n=1 Tax=Thermoanaerobacter italicus Ab9 RepID=C6PFM7_9THEO Length = 907 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++DK+I +V + E + ++ + H+ + + R + G+ I L L E Sbjct: 455 LVDKEIIDFSAEVKDFAERKLNIKLNDNFLYAFSFHLEALIKRIKNGQPITNL---RLNE 511 Query: 73 LAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + ++ ++ +++ +F + V+ E G++ L Sbjct: 512 IRNKYINEFKISEEIVKMIRDKFKINVSTEESGFITLFLVS 552 >UniRef50_C6QUF4 PTS modulated transcriptional regulator, MtlR family n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QUF4_9BACI Length = 685 Score = 55.6 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 + ++ ET + ++ +++ L R RG+ I+ +D + L + ++ Sbjct: 192 VKNIIRQSETFSAIRYTNDVIHTLTVYLSIFLKRWIRGKYIQ-MDEQEKEVLQSTREYKT 250 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + + F ++V E YL L G + ++++ Sbjct: 251 AHHIITQIENVFQVDVPQDEICYLTTYLLGSRVTDDKQI 289 Score = 38.3 bits (88), Expect = 0.072, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 12/108 (11%) Query: 13 VIDKD-ICKGMMQVVNVLETECH------LPVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 ID++ + Q++ + + R E + HM A R + G ++ Sbjct: 288 QIDQNNEIATLKQIIKNMVDDFQKYACVQFKHREELEKNLLIHMKPAYYRLKYGLHLQ-- 345 Query: 66 DNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 NEL + + ++ + V E Y+ + G Sbjct: 346 -NELTQSVKANYHDIFTLTKKVVHHVENVVGQSVGDDEIAYIAMHFGG 392 >UniRef50_C2Q5B4 Putative uncharacterized protein n=2 Tax=Bacillus cereus RepID=C2Q5B4_BACCE Length = 283 Score = 55.2 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 5/109 (4%) Query: 6 NLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPL 65 LL I + + Q+V ++ + + H+ A+ R ++G+ I Sbjct: 58 KLLQLINEIPTEHFELTTQIVEYIKKQISNSISDNIYLTLTDHINFAINRFQQGQIIR-- 115 Query: 66 DNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 N L E+ + + + ++ + E+ E G + ++ Sbjct: 116 -NPLFWEIKKFYPEEYNVSLTALTIIKEHTGFELPEEEAGSIALHVINA 163 Score = 41.3 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query: 6 NLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIE 63 N++ E ++ I G++++VN + + + +TH+ R R E+I Sbjct: 167 NIVMEETIMVTKIVGGILKIVNY---HFGIKLDEKSLNYNRFVTHLRYFAYRLSRNEQIV 223 Query: 64 PLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 D+ L ++ + + ++ +L + ++ E Y + ++ Sbjct: 224 EEDSLLYQQVKESYPEAYGCAKKIMALLKSNYNQKLTKNEITYFVIHI 271 >UniRef50_Q5KYD3 Hypothetical conserved protein n=1 Tax=Geobacillus kaustophilus RepID=Q5KYD3_GEOKA Length = 684 Score = 55.2 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 + + E+ + E ++A R RG+ ++ +D + L +Q Sbjct: 191 IFDWICQFESTFSIRYTGEVIQTLPIYLALFQRRWARGKFVQ-MDEQEKEVLRSMREYQI 249 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 L + + + + E YL +L +A ++++ Sbjct: 250 ADHLVRRIENVSQISIPDDEVCYLTTHLLSFRVADDKQM 288 Score = 44.0 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 11/103 (10%) Query: 17 DICKGMMQVVNVLETECH------LPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 D + +++ + + R E + HM A R + G ++ N+L Sbjct: 292 DDITTLKRIIRHMVDDFQTYACVQFKRREELEKNLLVHMKPAYYRLKYGFHLQ---NDLT 348 Query: 71 AELAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + ++ L V+ E Y+ + G Sbjct: 349 ESVKANYQDLFTLTKKVVHHLESVVGQPVSDDEIAYIAMHFGG 391 >UniRef50_P39805 Transcription antiterminator licT n=25 Tax=Firmicutes RepID=LICT_BACSU Length = 277 Score = 55.2 bits (132), Expect = 6e-07, Method: Composition-based stats. Identities = 12/106 (11%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + + ++++ + + + H+ A+ R+++G +I+ N LL E Sbjct: 66 IPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDHINFAIQRNQKGLDIK---NALLWET 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + + + ++ + + + E G++ ++ + Sbjct: 123 KRLYKDEFAIGKEALVMVKNKTGVSLPEDEAGFIALHIVNAELNEE 168 Score = 42.9 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 42/97 (43%), Gaps = 4/97 (4%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 +I K M +++++++ + E +TH+ R G +E D+ LL + Sbjct: 174 NITKVMQEILSIVKYHFKIEFNEESLHYYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVK 233 Query: 75 Q--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++ ++ + +E+ ++ E YL ++ Sbjct: 234 EKYHRAYECTKKIQTYIEREYEHKLTSDELLYLTIHI 270 >UniRef50_A4ED34 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED34_9ACTN Length = 302 Score = 55.2 bits (132), Expect = 7e-07, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 3/107 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLDNELLAE 72 + DI +V++++ E + + H++ A+ R+++G I PL E+ Sbjct: 85 LPSDIVMFAAKVMDIVANELPYDLSTNATLFMADHLSFAVARAQKGVRIAMPLAYEVRE- 143 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++A + L KE + E + NL + + Sbjct: 144 -TYPKEYKAAQFIVMRLEKELGERLPKDEIASIAMNLVNARVVEAVK 189 Score = 40.6 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 8/101 (7%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTM--AMTHMASALMRSRRGEEIEPLDNELLAE 72 K + V+ +LE++ + V + TH+ R + GE + + ++ Sbjct: 195 TKQFDDMLEDVIEILESDFRIIVDRDSFDFTRFATHLRYLFKRIQAGESLNSANMQMYKN 254 Query: 73 LAQSSHWQAVVQLHQVLL----KEFALEVNPCEEGYLLANL 109 + + + + + + + ++ EE YL+ +L Sbjct: 255 FR--EEFPQLAECVKHIGSYCRETWDATLSEEEELYLMIHL 293 >UniRef50_A6M2B9 Sigma-54 factor, interaction domain-containing protein n=5 Tax=Clostridia RepID=A6M2B9_CLOB8 Length = 895 Score = 54.8 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +ID+D K + +V+ + + + S T H+ + + R + I + + + Sbjct: 431 IIDEDTLKCIDSIVSHITRKLPVIFDSNLYTAFALHINTLINRINSDKIIINTNLNRIKD 490 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 L S + +++ +++ + E GYL L Sbjct: 491 LY-PSEFAVALEIKEIIENTINKSIPIDEAGYLTLFLI 527 Score = 44.8 bits (105), Expect = 9e-04, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 38/95 (40%), Gaps = 1/95 (1%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS 76 ++ K + +N+L+ + + + E + H++ + R R + + Sbjct: 792 ELYKDVTLFLNILQEKLLIKLSDENMVGVILHLSFVIGRLRNEDNPAVYPQKEKYLEENL 851 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + + + ++ +E++ E YL NL Sbjct: 852 NLYNIIKENLNFITSKYKVEISDDEICYL-MNLLS 885 >UniRef50_C9RTV4 PTS modulated transcriptional regulator, MtlR family n=2 Tax=Geobacillus RepID=C9RTV4_GEOSY Length = 714 Score = 54.8 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 1/99 (1%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + ++ V+N E ++ + R +G++I+ D + Q+ Sbjct: 202 LRNILDVLNECEKNLNIQFADDVLYHLALRFWLFGKRIVQGKKID-FDPVEKEVIQQTKE 260 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 ++A L F + E YL +L + + Sbjct: 261 FEAAQTARSKLESIFQTSIPDDEVYYLATHLLSSKVQYS 299 Score = 38.3 bits (88), Expect = 0.069, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 7/103 (6%) Query: 15 DKDICKGMMQVVNVLETECH------LPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNE 68 D K + +V + TE P R + H+ A R + G ++E E Sbjct: 305 SHDDYKNLQNIVQKMVTEFQAFTCITFPNRKAVEENLLLHLKPAYYRIKYGLQVENPMIE 364 Query: 69 LLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 L+ + ++ +V+ E + + G Sbjct: 365 LIKT-KYKDLFLITKKVIHHFETAIGKKVSDEEAALIAIHFGG 406 >UniRef50_UPI0001694F32 transcriptional antiterminator, BglG family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001694F32 Length = 652 Score = 54.8 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 +++ + + ++ +LE + +L + ++ + + A+ R R E I+ ++ + + Q Sbjct: 208 ENVFQAVHSLIKMLEEKLNLLLTDQEMIGLLFRFSIAIRRIRDNERIQ-IEAISVKAIKQ 266 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 S+ ++ V++ L + ++ E Y+ L Sbjct: 267 SASYKIVLEGLTDLGLQMGIKFPEEEAVYVSMQLI 301 >UniRef50_B9Y9G6 Putative uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9G6_9FIRM Length = 300 Score = 54.8 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 2/114 (1%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP--LD 66 E + DI +++ + + + H+ AL R IEP + Sbjct: 176 QEINFFNNDIISSTSEIIMDVLAHNDYEISDLILQNLVVHVLIALNRMYANHYIEPEGIQ 235 Query: 67 NELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + + + +++ L +++ +++N E +L NL G + V Sbjct: 236 DVFQNKNLFAHEILIAESIYRKLCRKYNIQINENEIYFLAINLKGKKNYHSANV 289 >UniRef50_Q03XR5 Beta-glucoside operon antiterminator n=2 Tax=Leuconostoc RepID=Q03XR5_LEUMM Length = 286 Score = 54.8 bits (131), Expect = 8e-07, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 5/99 (5%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A I D + +++ E L H+ A+ R ++ I+ NELL Sbjct: 62 ADTISSDYVEIASHIISTAEKSLGLSFDGYLLIGLADHIQFAVERLQKNLPIK---NELL 118 Query: 71 AELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 E ++ + ++ +++ E G++ Sbjct: 119 WETKHFYPDEYRIGALAVAFINEQMGVQLPEDEVGFIAL 157 >UniRef50_UPI000196B732 hypothetical protein CATMIT_00744 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B732 Length = 280 Score = 54.8 bits (131), Expect = 9e-07, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE-PLDNELLAE 72 +D + +++ E E + ++ H+A ++ R + I PL +++ Sbjct: 73 VDPIFLEIANEIIRYAEKEFG-DIDTKILLPLADHIAFSIDRIKNDMVISNPLTSDI--R 129 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 L + ++ + +++ + E+ E GY+ +++ + Sbjct: 130 LLFADEYEVATKARKIIKRRLGYEITDDEIGYISLHIHAALSSQ 173 Score = 48.7 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 37/97 (38%), Gaps = 3/97 (3%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + + Q V +E ++ + + + H+ ++R R E+++ + E Sbjct: 178 SLQVASIIHQTVTYVEETFNIVIDEDSIAYIRLVNHIKFLMVRIDRKEDVQVSMTDYTKE 237 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++ + K +++ E GYL ++ Sbjct: 238 -KFPESYAVACRVADYIEKLILEKISDEEIGYLAIHI 273 >UniRef50_B0NY82 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NY82_9CLOT Length = 280 Score = 54.4 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 36/101 (35%), Gaps = 5/101 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + ++ + + H+ A+ R G ++ N LL ++ Sbjct: 66 IPSKYLEVSNCIIERAKKYLDAEIDDNIYISLTDHIHMAVKRYLDGMQV---PNPLLLDI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + ++ Q +++ + +E+ E G++ + Sbjct: 123 KRFYNKEYEIGCQALEIIKDQLKVELPEDEAGFIAFHFVNA 163 >UniRef50_B9Y3A0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A0_9FIRM Length = 654 Score = 54.4 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 36/102 (35%), Gaps = 2/102 (1%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + + + +E E + E + + A A+ R + L + + + Sbjct: 197 LELLKSCIADIEKEWNFTFAEESYKSILLYAALAITR--SDFSVLHLSESEEEIVVKYNE 254 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + + +++ K+F + + E Y L M +E+ Sbjct: 255 YNLAQSIFRIINKKFYVNIPESEVKYFAIQLLCSKMIHTQEI 296 >UniRef50_C6Q8D8 PTS system transcriptional activator n=1 Tax=Thermoanaerobacter mathranii subsp. mathranii str. A3 RepID=C6Q8D8_9THEO Length = 897 Score = 54.4 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 40/98 (40%), Gaps = 5/98 (5%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 V+ +I + + +++ E + + E H+ +A+ R +R +I N L Sbjct: 434 NVVGAEIVRAVEEIIKFSEKRLNKVLSKEMYYAMAVHIYTAIERIKRNRKIV---NPQLN 490 Query: 72 ELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 ++ S + + +++ + + + E G+L Sbjct: 491 KIRTEYSEEFNIALDCLKIIERVLDVSMPIDEAGFLAM 528 Score = 45.2 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 40/94 (42%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + K + + + +N +E E ++ V + H+A + R + G ++ N+ Sbjct: 793 NINSKYVLQDIKMFINAIENELNIKVNTNALIGIALHVACMIDRLKGGGSVDEFMNKESY 852 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYL 105 + V + ++L K++ + ++ E Y+ Sbjct: 853 ISENYELYNIVKKACEILNKKYDINISDDEICYI 886 >UniRef50_B9Y4W4 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y4W4_9FIRM Length = 506 Score = 54.4 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 7/98 (7%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP---LDNELLAEL 73 + + Q V +E + + +TH+ A+ R R I P +D +L+ Sbjct: 201 QSLRQVEQCVGEIEEAIGVVLGDIYYINIVTHILIAMERMRSRRYINPGGVMDPKLI--- 257 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + Q + + P E Y+ + G Sbjct: 258 -NPLIYKKIAACVQTFSQAVQITFPPNELLYIYTHFMG 294 >UniRef50_B9EBW1 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9EBW1_MACCJ Length = 283 Score = 54.0 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + + ++ + +++V+ ++ + + + H+ AL R + G + N L E Sbjct: 69 LTNDEVIQTVIEVIEFIDHKTNGEMNDNILLSLTDHIIFALKRYQEGIIVA---NPFLKE 125 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + Q+ +L ++ E G++ +++ + Sbjct: 126 TESLYRQEFLIAEQVVAMLNDRLQVQFPKTEVGFIALHIHSSVNNHS 172 >UniRef50_C2HQQ4 Beta-glucoside transcriptional antiterminator n=3 Tax=Lactobacillus RepID=C2HQQ4_LACAC Length = 291 Score = 54.0 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 3/101 (2%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ID + ++++ T + + H+ A+ R + G I+ + + Sbjct: 73 QIDPKYIELSDRIISEAITSSGKKLSDDIYVSLPDHLQFAVERVKNGILIQ--NKLTVET 130 Query: 73 LA-QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + +Q ++ + L ++ L+ E + +L Sbjct: 131 MQTYPDEFQLGKRVLKYLSEKTGLDFPDDEATNIAMHLITA 171 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 48/102 (47%), Gaps = 4/102 (3%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--- 73 ++ +++++ + + ++ S +TH+ + R ++ + + ++ L ++ Sbjct: 185 ELINRFLKIISEMLGK-NINSNSVSYYRLITHLKFFIQRIKKQQSQKFKADKDLYDMVIH 243 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 + + ++ ++L +F EV+ E +L +++ + ++ Sbjct: 244 SYHKEYIIAQRIAGIVLHDFNYEVSEDEVMFLTIHIHRINVS 285 >UniRef50_B0N6K6 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N6K6_9FIRM Length = 644 Score = 54.0 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 10/95 (10%), Positives = 31/95 (32%), Gaps = 6/95 (6%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + Q+++ H+ + H A + R + I + Sbjct: 194 DLDLLKQIISNKLKNAHIKTNDFNFKNLIIHFALMISRIQFDCYIN-----TNNTIKIDD 248 Query: 78 HW-QAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + + + F + ++ E+ Y+ ++L Sbjct: 249 NYTDFIDDIANEIEYTFNITISEGEKKYIYSHLVA 283 >UniRef50_A6M218 Sigma-54 factor, interaction domain-containing protein n=19 Tax=Firmicutes RepID=A6M218_CLOB8 Length = 916 Score = 54.0 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 45/110 (40%), Gaps = 1/110 (0%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A +++ + +++++ + + + H+ ++ R G++I ++ Sbjct: 455 AKIVNIKVATVAEKMLSIASEKLNRDFDQKVYFGLALHLQGSIERINSGKKIYHPKLNII 514 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + + + + ++ KEF +++ E GY+ L +E++ Sbjct: 515 R-VENREEFAVAMDIIKIAEKEFHIDIPLDEIGYITMFLAACNDENSEQL 563 Score = 44.8 bits (105), Expect = 7e-04, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 39/90 (43%), Gaps = 2/90 (2%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRG-EEIEPLDNELLAELAQS 76 + + V+ +E + ++ + + H+ + + + G +E++ D E + S Sbjct: 818 VFSDIRDVIRKIEENLKVRIQHDAQIGILIHITFLIDKLKHGGQELKFKDLENYRHMYNS 877 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLL 106 + + ++ + L + + + + E Y++ Sbjct: 878 -EFSLIKKILKDLERVYNINIGDNEIAYIV 906 >UniRef50_C5EIH6 Transcription antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIH6_9FIRM Length = 276 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 9 CEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNE 68 I ++ + + + V+ + P+ S+ + H+ A+ R ++G L N Sbjct: 61 RMIEEIPQETLEAVQEAVDAAGSSLSCPLDSQAFFTLLDHLIYAMERCQKG---IVLQNR 117 Query: 69 LLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 LL E+ + ++A L + L++ E G + +L Sbjct: 118 LLWEVKKFYPREYRAGKDAVDYLNQRLGLKLPEEEAGNIAFHLVNA 163 Score = 44.8 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 39/95 (41%), Gaps = 4/95 (4%) Query: 19 CKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL--A 74 K + ++ V++ + +E + +TH+ + R G +E D+ L ++ Sbjct: 177 VKMVKDILTVVQFHMKKELDTESLYFSRFVTHLQFFVQRLLEGRMLEETDSFLYEQISRQ 236 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + +A +++ + K + E YL ++ Sbjct: 237 YPNELEAAMKISGYVEKSTKTLITREEILYLTIHI 271 >UniRef50_D1AMM5 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AMM5_SEBTE Length = 655 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 43/107 (40%), Gaps = 4/107 (3%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 G ++ + + +++ E + + + +TH+ + R R G + +N++ Sbjct: 199 GQFGREEVEAVAKILKDTEQKLNYTMGEIYYINMITHILILIKRLRNGNIL--YENKMRR 256 Query: 72 ELAQSSH--WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 ++ ++ + ++ + + F +EV E ++ L M Sbjct: 257 DIRKTDKRIYTISQEMSGKITETFKIEVPEEETYFIYQYLISSGMEI 303 >UniRef50_C5EMV1 Transcriptional antiterminator n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMV1_9FIRM Length = 272 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 48/116 (41%), Gaps = 6/116 (5%) Query: 4 RLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIE 63 + + L + I+ + +++ E + + + H+A A+ R+R G Sbjct: 56 KTSALQQVNSIEPVYIEAAGRIIEEAEGTMGV-LSHDILIPMADHIALAVSRAREG---R 111 Query: 64 PLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 L N ++ SS +Q+ ++ ++ + + ++ E GY+ +++ N Sbjct: 112 ELPNPFRHDIKALFSSEYQSAMKGVAIIRELTGVTISEDEVGYITLHIHAGLSEEN 167 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 3/95 (3%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D+ + + ++ +E+ + S+ +H+ + R+R+GE LD + A + Sbjct: 173 DMARLVQDSMHQIESRMGFNLASDSLGYNRLASHVRYMIARARKGER-AGLDMQDYARTS 231 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ ++ + + K L V P E G+L ++ Sbjct: 232 FPKPYEVAEKVCRDMEKRLGLPVAPEETGFLAIHI 266 >UniRef50_C8WQV6 Transcriptional antiterminator, BglG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQV6_ALIAD Length = 674 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 34/96 (35%), Gaps = 7/96 (7%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + V +E LP S+ + H+A AL R R G I N LL + Sbjct: 314 ALDLAHRFVRAVEDITRLPFASDHLLVSGLAQHLAPALDRVRAGLPIR---NPLLETVKA 370 Query: 76 --SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + A + + L + E G+L +L Sbjct: 371 RYPELFAAAESASREVFAPHGLRLPDEEIGFLAMHL 406 >UniRef50_Q184L9 Transcription antiterminator n=3 Tax=Clostridium difficile RepID=Q184L9_CLOD6 Length = 278 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 6/106 (5%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ- 75 + K +++ + V +H+ A+ R ++G L N +L E Q Sbjct: 68 EYFKISEEIIEKANEVLNTQVNDSIILALTSHIEFAVQREKQG---IKLPNLILNETKQL 124 Query: 76 -SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY-GLWMAANEE 119 ++ + + K +++ E GY+ ++ GL + +E Sbjct: 125 YREEFEFGLWAIDEIEKRIGIKLPEDEAGYIAIHIINGLENSQKDE 170 >UniRef50_B9DU03 Transcriptional regulator (Antiterminator) n=2 Tax=Streptococcus RepID=B9DU03_STRU0 Length = 655 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 3/96 (3%) Query: 16 KDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ 75 + + +V L + + H+A A+ R G +I L + E Sbjct: 190 PISFEELTIIVLDECRSQSLKLSDFVIQNLIVHIALAISRVNDGFKISQLS---IDEKKF 246 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + + + E Y+ +L Sbjct: 247 KTEILVATNILRRVEYVTGTDFPTEEINYIALHLIS 282 >UniRef50_C3RIA8 Transcription antiterminator n=1 Tax=Mollicutes bacterium D7 RepID=C3RIA8_9MOLU Length = 275 Score = 53.7 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 44/120 (36%), Gaps = 5/120 (4%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 + L I D+ ++++ + H+ A+ R +G Sbjct: 54 KQNNRFLELIKDIPVDVLNVTDEIIDFARNGLDKELNDGIYITLTDHINYAIERYLQGIN 113 Query: 62 IEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ N LL E+ Q ++ + +++ ++ + ++ E G++ + + + E Sbjct: 114 VQ---NPLLWEIRQFYQEEYKIAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEME 170 Score = 38.6 bits (89), Expect = 0.053, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 41/101 (40%), Gaps = 4/101 (3%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL- 73 I K + +++N++ + + +TH+ R GE+ D+ L + Sbjct: 174 QITKIIQEILNIVRYHLKISFDEDSLDYHRFVTHLKFFAKRLMFGEKEAKRDDILFDIVI 233 Query: 74 -AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++ V + + + K + +++ E+ YL ++ L Sbjct: 234 ERYPEAFECVKNIEKHVQKIYKKDLSQAEKLYLTLHIARLK 274 >UniRef50_D1PSC1 Transcription antiterminator LicT n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PSC1_9FIRM Length = 288 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 5/114 (4%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRG-E 60 + RL L E I + ++ ++ H P+ H++ A+ R +G E Sbjct: 56 QRRLRELVE--QIPIEHLDLTEAMIAEIKAAIHQPLNESLLITLADHISFAIQRKAQGIE 113 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 PL +L + +Q + ++ + F +E++P E ++ ++ + Sbjct: 114 FKNPLAGSIL--CYYPTEYQLGQRCLAMVKERFGVELSPDEAAFIALHIVNAEL 165 >UniRef50_D1ANJ9 Transcriptional antiterminator, BglG n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1ANJ9_SEBTE Length = 281 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 40/101 (39%), Gaps = 5/101 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D +I + + +++ E + ++H++ A+ RS+ G I N L EL Sbjct: 70 DSEILDIVEDALKIIDKELKEKLSIYFHLTMLSHLSFAIERSKYGTIIR---NPFLEELR 126 Query: 75 --QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 ++ + + K ++ E G++ +++ Sbjct: 127 VLYPQEYRIAEKFIAEVNKHLEYKLEIDEVGFITMHIHAAL 167 Score = 43.3 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTM--AMTHMASALMRSRRGEEIEPLDNELLAELA 74 + ++V V+E E + E +TH+ A+ R + +IE + + + Sbjct: 177 EQLTLTYELVKVIENELGHKIDRESYDFIRLLTHLKFAVNRVKNNIKIENILLPEIKKKL 236 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + + ++ + K + + N E GY+ +L + Sbjct: 237 KLYY-KISQKVAKFAEKNYNILFNEDEVGYITIHLAKIK 274 >UniRef50_D0R5U6 Transcription antiterminator n=1 Tax=Lactobacillus johnsonii FI9785 RepID=D0R5U6_LACJF Length = 295 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 4/101 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I+ +V+ ++E ++ Q H+ AL R +I + + E+ Sbjct: 63 INASTIDLTNKVIQMVEPLLNVKFNDFQHLALADHIDFALSRIEDNIDISAAN--IRWEV 120 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 ++ ++ ++ KE + + E ++ + Sbjct: 121 KNLFPKEYKISEKVIALINKEMKVNLPASESTFMTYHFVNA 161 >UniRef50_A8FJ69 BglG family transcriptional antiterminator n=6 Tax=Bacilli RepID=A8FJ69_BACP2 Length = 282 Score = 53.3 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 13/116 (11%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L + ++ ++V E + + S M H+ A+ R ++ I Sbjct: 58 KEFLQLLDSMPQEFIDLTQRIVQYAEKRLNSSLNSGVYFTLMDHLNFAVERHKKNINIT- 116 Query: 65 LDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 N + E+ + ++ +++ ++++ E + +L ++ Sbjct: 117 --NRVYWEIKNYYTEEFEVGKYALELVNDTLSIQLPKEEAANIAFHLINALGEESD 170 Score = 42.5 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 4/102 (3%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ-- 75 K + +VN++ ++ + E + +TH+ + R + + +NEL ++A Sbjct: 179 KMIGSIVNLVRYTLNMKMDQENIHYSRFITHVKFFVERFYANKLLSDQENELFEQIAHLY 238 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 ++ + + ++ + E YL +++ L Sbjct: 239 PQAMDVAFKIKDYIKQVHSIVIPNDELTYLAVHIHRLMSYQQ 280 >UniRef50_B0N368 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N368_9FIRM Length = 619 Score = 53.3 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 5/106 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D + + +V+ + + + H+ L R +R I DNE+ ++ Sbjct: 183 DHEFIDELRKVIFN----DGITMPQRVFQNFIIHIQVQLNRIQRKCYISFHDNEI-EKMK 237 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + + +V+ K F +E++ E+ YL ++ G + + Sbjct: 238 MEYEFLVAKDVSKVINKYFHIELSVEEQCYLAIHILGKKSNSTSAI 283 >UniRef50_C2GFH3 Transcriptional antiterminator n=2 Tax=Corynebacterium glucuronolyticum RepID=C2GFH3_9CORY Length = 333 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 7/114 (6%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 R L +D + + + V++ + + H++ A+ R+ GE+I Sbjct: 108 ERAQFLKGVLSLDPAVMETISAAVDLAVDLLG-ELHPSVYVVLAEHISFAVQRAGSGEQI 166 Query: 63 EPLDNELLAELAQ--SSHWQAVVQLHQVLLKEF-ALEVNPCEEGYLLANLYGLW 113 N L+ E+ +QA + + + E ++ +L Sbjct: 167 R---NSLVDEIRAAFPLEFQAAQLMVSYINSHTANATLPVDEAAFIALHLNAAR 217 >UniRef50_C9XQT4 Transcription antiterminator n=12 Tax=Firmicutes RepID=C9XQT4_CLODC Length = 287 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + +L L I + K +++ + + + + H SA+ R + G Sbjct: 62 ISNKLQELLNN--IPIEHMKLSSEIIEYAQIKLNKKLNESIYISLSDHTYSAIQRMKEGI 119 Query: 61 EIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 ++ N +L E+ + ++ ++ ++ + +++ E G++ ++ ++ Sbjct: 120 NVK---NAILWEIKRFYKEEFEIGMKALDIIENKTGIKLPEDEAGFIAFHIVNAQLSE 174 >UniRef50_A6LXA2 Transcriptional antiterminator, BglG n=15 Tax=Firmicutes RepID=A6LXA2_CLOB8 Length = 279 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 41/106 (38%), Gaps = 5/106 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I ++ + ++V+ + + H++ A+ R +G N LL E+ Sbjct: 66 IPLEVIQTTNEIVSYARYSLGKKLNDNIYILLTDHISFAMERVNKG---LQFKNALLWEI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 + + + + Q++ K +++ E + ++ + ++ Sbjct: 123 KRFYNHEFLIGKEALQIIEKRLHVDLPEDEAANIALHIVNAQLNSS 168 Score = 46.3 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS- 76 + ++N+++ L + +TH+ R RG EIE D L + + Sbjct: 178 NMIQNILNIVKFHYKLELDEYSLHYERFITHLKFFSQRIFRGNEIEDEDTSLSKIMREKY 237 Query: 77 -SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ ++ + + EF E+ E YL ++ Sbjct: 238 KEAYKCAEKIKKYVKSEFNSELTDEEMMYLAVHI 271 >UniRef50_D2C0F0 Transcriptional antiterminator, BglG n=2 Tax=Enterobacteriaceae RepID=D2C0F0_DICD5 Length = 279 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 44/100 (44%), Gaps = 5/100 (5%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I ++ + +++ + VR + H+ A+ RSR+G I+ N LL E+ Sbjct: 66 IPDEVIEMAAMIISRANLQLSSKVREQIFFTLADHLTFAIERSRKGIVIQ---NRLLPEV 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + ++ + ++ +++ +E+ E G + +L Sbjct: 123 RRFYPQQFRVASEAVAIIRQQYGIELPEEESGNIAFHLVN 162 Score = 39.0 bits (90), Expect = 0.042, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 4/98 (4%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL- 73 K + + N+++ + +E + MTHM L R + GE D+ LLA++ Sbjct: 175 QSVKMLKDIFNLVQYHFKKEIDTESINYSRFMTHMQFFLQRLQEGEISTARDSFLLAQVI 234 Query: 74 -AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 ++ + + + + + E +L +L Sbjct: 235 KEYPDAYRGALLIRDYVKVRLDITLGGNELLWLTVHLV 272 >UniRef50_A8F9J6 Bifunctional PTS family fructose/mannitol (Fru) porter component IIA/transcriptional antiterminator n=2 Tax=Bacillus pumilus RepID=A8F9J6_BACP2 Length = 639 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 34/93 (36%), Gaps = 3/93 (3%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + + +V + L ++ + H+A A+ ++R+ + I Sbjct: 194 LETIRSIVLTNLHQESLLIKDIALKNLVIHLAIAIQQTRKNQRIPASTTRTQ---RSPVL 250 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + ++ + F + ++ E YL+ +L Sbjct: 251 VRIAQKIIHQVSDTFHVTLSEDETDYLVMHLLA 283 >UniRef50_C4V3X4 Possible N(Pi)-phosphohistidine--sugar phosphotransferase n=2 Tax=Selenomonas RepID=C4V3X4_9FIRM Length = 644 Score = 52.9 bits (126), Expect = 3e-06, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 7/111 (6%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQG--TMAMTHMASALMRSRRGEEIEPLDNE 68 +GV D+ + + + +V+ ++ + L +++ H+ A+ R + NE Sbjct: 293 SGVNDEHVKELVEKVLVDVDKKFGLDFTADEYLKDGLALHLRIAIARV---NFHVNIRNE 349 Query: 69 LLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 LL+ + Q +Q V +++ +E N E GY+ + + Sbjct: 350 LLSSVKQDYPLAFQIAVYAAKLVRDIDHIEFNENEIGYIALHFCAAMSRNS 400 Score = 49.8 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + ++ M ++++ L + A ++ RS G IE + + + Sbjct: 187 LFERITYDQMEEILSQAGNVRRLQLTDSARHDLAVQTALSIQRSLTGHGIEC-SSSMAQK 245 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLL 106 L + + A ++ +L +++ E YL Sbjct: 246 LEDTFEYSAAKEILNKILNSIGVDIPYSEVFYLT 279 >UniRef50_C9B3C8 Transcriptional antiterminator bglG/CAT RNA-binding protein n=38 Tax=Enterococcus RepID=C9B3C8_ENTFC Length = 283 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 38/99 (38%), Gaps = 3/99 (3%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + + + QVV E + + H+ A+ R++ E I+ + L Sbjct: 66 IPAEEIEWVKQVVEQAEDKLKVEFSPNIYLTLTDHLHYAITRAK--ENIQLPNPLLFETK 123 Query: 74 A-QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 +QA + + ++ +E++ E G++ + Sbjct: 124 KFYPKEYQAAKEALLFVKQKTGVELSEDEAGFIAFHFVN 162 Score = 38.6 bits (89), Expect = 0.060, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 38/93 (40%), Gaps = 4/93 (4%) Query: 21 GMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ--S 76 + +++++ + E +TH+ R +GE + D L A + + Sbjct: 179 MVRDILSIISKFFGIVFDEESLNYQRIITHLQFFAQRYLKGEGSDEQDEFLYALVQEKYP 238 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + V ++++ L + E+ E+ YL ++ Sbjct: 239 KAFHCVERINEYLRQTQKQEMGIAEQIYLTIHI 271 >UniRef50_P24401 Transcription antiterminator lacT n=14 Tax=Lactobacillus RepID=LACT_LACCA Length = 292 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 2/99 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I D+ ++++V + + L V H+ A R + G E + + + Sbjct: 67 IPIDVVTTTYEIIDVAQKQYRLKVLDYIYITLSDHIYEAYKRYQAGTYQETMVPDF--HI 124 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + Q Q++ ++ E L + Sbjct: 125 QYPAEYAVAKQALQIIATNLGVQFPQSEIKNLALHFINA 163 Score = 39.0 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 6/92 (6%) Query: 24 QVVNVLETECHLPVRSEQ---GTMAMTHMASALMRSRR-GEEIEPLDNELLAELAQ--SS 77 Q+V + H+ M H+ + R +R + E+ EL Q Sbjct: 183 QLVQEVLKRHHITRSHSNGNYYDRFMIHLQYLIDRLQRVDTYAVTIVPEVATELKQNYPQ 242 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ ++ + + ++ E Y + ++ Sbjct: 243 SYKIASEIFDEIKDQLYRSMSEDERLYFIIHI 274 >UniRef50_B1YFN4 Transcriptional antiterminator, BglG n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YFN4_EXIS2 Length = 259 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 2/77 (2%) Query: 35 LPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA--QSSHWQAVVQLHQVLLKE 92 + S THM L R +G+ + +DN +L+ + + ++ + L +E Sbjct: 170 IETTSMTYYRFFTHMKLVLARIEQGQTLHDMDNVILSAVKTRYTDAFRCAENMAAWLEQE 229 Query: 93 FALEVNPCEEGYLLANL 109 V E GY+ ++ Sbjct: 230 LQTTVPQSEVGYMALHV 246 Score = 50.6 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 5/102 (4%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA-- 74 DI Q+++ E E P H+A A+ R R + + + N L E+ Sbjct: 44 DIIDLSEQIISYAEGELKTPFHDYIHVSLTDHLAHAV-RLAREQLV--VHNRLAEEIRLL 100 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 ++ +Q + ++ A+ + E + +LY Sbjct: 101 YTAEYQIGEWAVAHIEQKLAVSLPKEEAANIALHLYNARQRH 142 >UniRef50_A0AGN0 Complete genome n=21 Tax=Firmicutes RepID=A0AGN0_LISW6 Length = 938 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 42/119 (35%), Gaps = 5/119 (4%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + R N+L +++++I + +E + + H+ S + R + Sbjct: 462 IHNRENILK---IVNEEILNFAEGIEQRIEHQLGKKLNERFLLAFSLHLTSFIKRIESNK 518 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ + E + Q ++ ++ + F + V E YL L + E Sbjct: 519 PLKYTNIENVVN-DQPEAYELSREIKDDIEATFHIRVPNMEVMYLTL-LISSLLKEQEN 575 >UniRef50_C9AZS3 Beta-glucoside operon antiterminator n=2 Tax=Enterococcus casseliflavus RepID=C9AZS3_ENTCA Length = 279 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 1/98 (1%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I+ + ++ + E H+ AL R+R G +I+ L ++ Sbjct: 69 IEYRDLQLASDILKLFEEAFQCESNPALLVALADHIGFALTRAREGMKIQTPLEWELKQV 128 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ +Q +++ K L + E ++ + Sbjct: 129 Y-PKEYEIGLQAVELMQKRTHLNIPKDEAAFITLHFVN 165 Score = 41.3 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 4/96 (4%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLA--EL 73 I K M ++ ++ R + + +TH+ + R E + LL +L Sbjct: 179 ISKVMKDILTIINYHYGKEFRQDSIYFSRFITHIRYFVKRQMSNELPAQPASSLLDVIQL 238 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 ++ +++ Q L + E+ E YL +L Sbjct: 239 KYPLDYECAMKIKQFLENRYQWEITEDEVLYLTLHL 274 >UniRef50_C9A391 Transcriptional antiterminator n=1 Tax=Enterococcus gallinarum EG2 RepID=C9A391_ENTGA Length = 642 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 18 ICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSS 77 + +++ L ++ T + H+A A+ R + G P + Sbjct: 177 DLDYIKEIIAELFSDYDFFTNDYALTNIVIHLAIAVDRMK-GNFQSPEAEAQAPHSIHPT 235 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 + ++ + + + + + E L Sbjct: 236 VLKISEKIAEKVAERYGIRFPKEEIRDLAI 265 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 2/98 (2%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRS-EQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 V DK+ + +++ ++ + E H+ + L R G E L Sbjct: 287 VTDKNCLDLVRKILAKVDELYFIDGNEPEFFIRFALHIKNLLYRINNGYSCRNPMTETLK 346 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + VQ+ V+ KE ++ E Y+ +L Sbjct: 347 K-ECPLIYDCAVQVSHVIQKEIGYTISEDEIAYIAFHL 383 >UniRef50_C8P2Y2 Transcription antiterminator LicT n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2Y2_ERYRH Length = 282 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 1/101 (0%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 I D + +V + + H+ A++RS+ E+ L E + Sbjct: 62 NKIPVDYFEATRAIVEYAHSVLDTSLSDTINVALTDHIYYAVLRSKDDVELPGLFTEEIK 121 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + ++ + K F + + E GYL+ ++ Sbjct: 122 -MYYPDEFKVGAWALNYINKRFEVTLPQDEIGYLVIHIVNA 161 >UniRef50_A6M341 Sigma-54 factor, interaction domain-containing protein n=2 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6M341_CLOB8 Length = 932 Score = 52.5 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 1/107 (0%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 ++DKDI ++ + E + H ++ R ++ + N L Sbjct: 471 IVDKDIVDFAEEIKMLAENRLSRKLSDRFIYAISLHFSALFNRIKKN-TVSFSTNIELTL 529 Query: 73 LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + S + ++H+++ + L + E YL L + +++E Sbjct: 530 SSNSKEYGVAKEIHKLIEDRYNLIIPEVEIEYLALLLSSIQELSHQE 576 >UniRef50_B0MFG1 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MFG1_9FIRM Length = 286 Score = 52.1 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 RL+ L + I D Q+ E + + HM A+ R ++G Sbjct: 62 NRLSELLK--QIPIDYFYLADQIKQHAEQKLSKELNQNIYVTLCDHMYYAVERFKQG--- 116 Query: 63 EPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 N+L+ E+ + +Q ++ +++ +++ E ++ ++ + +E Sbjct: 117 LLFQNQLMWEIKRFYPKEYQIALEAIKLMNSTLNVKLPEDEASFVALHIINAELNGHE 174 >UniRef50_Q9L8G7 ScrT n=3 Tax=Clostridium RepID=Q9L8G7_CLOAB Length = 282 Score = 52.1 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 48/122 (39%), Gaps = 8/122 (6%) Query: 1 METRLNLLCEAGVIDK---DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSR 57 +E + L +I + + K +++ + + + H++ A R Sbjct: 51 IENQNENLKFQSLISEIPIEHIKVSENIISYAKRKLDVKFDEHIYISLTDHLSFAFRRYS 110 Query: 58 RGEEIEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 +G +I+ N +L ++ + + + + + E ++++ E G++ ++ + Sbjct: 111 KGIKIK---NNMLWDIKRIYKKEYNIGMWAVEYIKGELGIKMDEDEAGFIALHIIDASLN 167 Query: 116 AN 117 + Sbjct: 168 ES 169 >UniRef50_C5WHP5 Putative uncharacterized protein n=3 Tax=Streptococcus RepID=C5WHP5_STRDG Length = 288 Score = 52.1 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 5/103 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + + + +++ E L H+ ++R R+G I N L Sbjct: 68 EQLPDEELNLFISLIDQAEQSLGLTFDENLHLSLTDHLHFMVVRVRQGVSIS---NPLAW 124 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 E+ + + +Q ++ L K+ AL++ E + +L Sbjct: 125 EVRKFYAQEYQVAKEMLVHLRKKLALDIPDDEAASIALHLINA 167 Score = 39.4 bits (91), Expect = 0.034, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 40/105 (38%), Gaps = 4/105 (3%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 + + ++ ++ ++ V + +TH+ R G D L + Sbjct: 177 SQRTTRLVIDILEIVRLHFGKLVSEDSISYNRFVTHLQYFSQRVVNGVVQGSNDAFLYDQ 236 Query: 73 LAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMA 115 + Q + + ++ + + + +++ E+ YL ++ + ++ Sbjct: 237 VKQNYPNSFICTQKIAHYVKENYDFDMSVDEKVYLTIHIQRMKVS 281 >UniRef50_C7TGE9 Transcriptional antiterminator, BglG family n=2 Tax=Lactobacillus rhamnosus RepID=C7TGE9_LACRL Length = 283 Score = 52.1 bits (124), Expect = 5e-06, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 40/107 (37%), Gaps = 3/107 (2%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + I + ++ ++ + + + H+ AL R +G+ I ++ + Sbjct: 64 NEVPYAILSVSEKFIDEAASQLKQKLNASLHVSLVDHIYHALKRYEKGQLIS--NSLIFE 121 Query: 72 -ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAAN 117 E ++ Q++ ++ +++ E G++ +L M Sbjct: 122 IENLYPEEFELSEHFLQMIAEQEGVQLPVDEAGFIAMHLINAEMNEE 168 Score = 46.0 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 4/106 (3%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAEL- 73 I K + ++N+++ + +TH+ + R +G + D EL + Sbjct: 174 SIMKEVYAILNIIKYSMDVEYDERSLSYYRLLTHLKFFVQRVMKGSMLASDDAELYMLVS 233 Query: 74 -AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 ++ ++ + + F + + E YL+ +L L E Sbjct: 234 RKYPDAYRVANKITKYVANAFHVVLPAEEVLYLMIHLNRLKTRETE 279 >UniRef50_C9KQ73 Putative transcription antiterminator GlcT n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQ73_9FIRM Length = 273 Score = 52.1 bits (124), Expect = 6e-06, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 4/105 (3%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI-EPLD 66 L +D + +V++ + + H+A AL R RRG + PL Sbjct: 63 LQRVNGLDPHAVELAARVLDEARKSFPA-MTDDILLPMADHIAMALERCRRGIRLPNPLQ 121 Query: 67 NELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++++ + ++ Q + +E L + P E GYL +++ Sbjct: 122 HDIM--VMFPDEYRIAEQGLHAIEREEGLSLPPEEAGYLSLHIHA 164 Score = 40.6 bits (94), Expect = 0.015, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Query: 19 CKGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQS 76 + + +ETE + + + T ++H+ ++R R EE+ +E + ++ Sbjct: 178 IRLAADCIAKIETELGISLRRTELKYTRLISHVCYMILRIRAQEEVPLQMDEYVRKMY-P 236 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 +Q +L + L ++ L ++ E L ++ Sbjct: 237 RAYQLAEKLCKALEEKLCLPISSAEVTLLAIHI 269 >UniRef50_Q184X6 Transcription antiterminator n=2 Tax=Clostridium difficile RepID=Q184X6_CLOD6 Length = 277 Score = 52.1 bits (124), Expect = 6e-06, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 33/105 (31%), Gaps = 1/105 (0%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + + +++ + E + H++ L R G + + ++ Sbjct: 66 IPLKDVELVSEIIQMGREELGDNLNDSILITLSEHISYMLKRMDEGLVFQSPLQWEIRQI 125 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + + + + L K+ + E ++ + + + Sbjct: 126 Y-PNEYNFSKKAVEYLRKKLDKNIPDSEIAFITIHFANAQLETKD 169 Score = 42.9 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLA--ELAQ 75 K + V+++++ + + T ++H+ + R GE +D LL ++ Sbjct: 178 KIIDNVLDIIKYHYGIEINEYSFDYTRFISHLRCFIKRQLSGEN-TNVDTSLLDIIKMKY 236 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 S + ++ L K + +++ E YL +L Sbjct: 237 KSDYNCAKKVKNFLEKTYKWKISENELLYLTLHL 270 >UniRef50_A6LPX9 Sigma-54 factor, interaction domain-containing protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LPX9_CLOB8 Length = 974 Score = 52.1 bits (124), Expect = 6e-06, Method: Composition-based stats. Identities = 11/105 (10%), Positives = 37/105 (35%), Gaps = 2/105 (1%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 LN+ ++ ++ ++ ++ + + + H+ + R G+ I Sbjct: 479 LNINELKTIVRPEVINITEGILELVREKYKF-INNSFFIALAIHINFTIERVMNGKVITK 537 Query: 65 LDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 N + + + ++ ++ K L++ E Y+ + Sbjct: 538 -SNIHMEKATMVQEMKIAEKIRIMIEKSTKLKIPKEETTYIAIYI 581 >UniRef50_A4IML7 Regulatory protein n=10 Tax=Firmicutes RepID=A4IML7_GEOTN Length = 953 Score = 51.7 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 41/109 (37%), Gaps = 8/109 (7%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 + R +L ++ D+ +V +E + + + H+ +A+ R R G Sbjct: 481 IRNRRDL---EKMVTPDVLALTEAMVVYVEKKLGRRLAKKVTYALALHIQTAINRLRAGT 537 Query: 61 EIEPLDNELLAELAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 + L E+ + + + ++ ++ +++ E G+L Sbjct: 538 IVSHPK---LNEVRAAYKHEFAVALDCLHLMEEKMHIDLPIDEAGFLTM 583 >UniRef50_Q67LZ9 Putative PTS system, IIA component n=1 Tax=Symbiobacterium thermophilum RepID=Q67LZ9_SYMTH Length = 634 Score = 51.7 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 11/113 (9%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVR-SEQGTM-AMTHMASALMRSRRGEEIEPLDNE 68 ++ + Q+ ++ET + +R + M H+ R RRGE +E N Sbjct: 265 RDIVHPADLELAEQMAVLVETRLGIGLRQDREFLMGLALHLRPIAERLRRGEAVE---NP 321 Query: 69 LLAELAQSSHWQAVVQLHQVLLKEF----ALEVNPCEEGYLLANLYGLWMAAN 117 LL E+ + A Q + + L V E GYL ++ Sbjct: 322 LLDEVQA--KYPAACLAAQDVGRALSAIWGLTVPEPEIGYLAIHIAAALEREK 372 >UniRef50_D2EKZ6 Transcription antiterminator n=1 Tax=Pediococcus acidilactici 7_4 RepID=D2EKZ6_PEDAC Length = 284 Score = 51.7 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 41/99 (41%), Gaps = 5/99 (5%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 DK I + ++V+ E + V + H++ AL R ++G+ I + L+ E+ Sbjct: 66 DKKIITLVNKIVDYGENYLKVKVTDYLYLALLDHISFALKRGQKGQFIA---SPLVWEVK 122 Query: 75 Q--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + +++ ++ L + + + E + + Sbjct: 123 KFYPQYYEIGIKAINWLNQTYEVNFPEDEAIPISLHFIN 161 >UniRef50_O33618 GlcA/glcB genes antiterminator n=7 Tax=Staphylococcus RepID=GLCT_STACT Length = 287 Score = 51.7 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 5/101 (4%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D ++ + +++ ++++ V + H+ A R ++ + I+ N L E Sbjct: 72 DDNVLQTIIEAMDIITHADRTVVDKDLMVALTDHILFAYKRIKQHQFIK---NPFLIETK 128 Query: 75 Q--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 Q S +Q V + + L K +E E G++ ++ Sbjct: 129 QLYSESYQIAVSVIEHLNKLLDIEFPEDEIGFIALHIASSK 169 Score = 45.6 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 45/103 (43%), Gaps = 3/103 (2%) Query: 8 LCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN 67 L E + ++ I K ++ + + + + S Q + H+ + R ++GE I+ D Sbjct: 174 LHEVRLTNEIINKSIL--IMEHDLKYKIDTNSIQYQRFIRHIQFLIRRLQKGEIIQVNDE 231 Query: 68 -ELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + + V++ +++ + +EV E YL ++ Sbjct: 232 FGNMLKAHYPLCYNIAVKIIKMMQQHLDVEVYEAELIYLTLHI 274 >UniRef50_C9A770 Transcriptional antiterminator bglG/CAT RNA-binding protein n=4 Tax=Enterococcus RepID=C9A770_ENTCA Length = 282 Score = 51.7 bits (123), Expect = 6e-06, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 5/101 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + ++V + + P+ S H+ A+ R ++G + N L E+ Sbjct: 66 IPLYYFEMTKEIVQLAQKMLPYPLNSTIYLTLSDHLHFAVERQQKGLSVT---NRLYWEI 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + ++A Q ++L +++ +E+ E + +L Sbjct: 123 KNYYTDEFRAAEQALRLLKEKYQIELPEEEASNIAFHLINA 163 >UniRef50_C0ETM8 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETM8_9FIRM Length = 711 Score = 51.7 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 41/100 (41%), Gaps = 1/100 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 ID ++ + ++ + + + + + + + + R ++G I+ L + A Sbjct: 198 NEIDGEVMAEVNHILGGCQKQLGMQLSDNGYLHLLVYTSLCVQRMQKGRFIKEL-KQSYA 256 Query: 72 ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 E++ + + + L + F L ++ E Y+ + G Sbjct: 257 EISIQPEYAVSEYIMKELRQFFHLSISVDETIYMAVFISG 296 >UniRef50_Q184X1 Transcription antiterminator n=6 Tax=Clostridium difficile RepID=Q184X1_CLOD6 Length = 635 Score = 51.7 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 1/100 (1%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDN-ELL 70 + D D + ++ LE + +TH+ L R G +IE + E+ Sbjct: 196 NLFDIDSIIFVETIITELEYNLGYTINQPYYINLITHILICLKRIEEGNQIESQEEREIS 255 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 + ++ V L + + +++ E Y+ L Sbjct: 256 VDNLDELVYKNVTTLIDKIENRYRVKITKDELMYIYIFLV 295 >UniRef50_B0N7R7 Putative uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N7R7_9FIRM Length = 201 Score = 51.7 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 44/120 (36%), Gaps = 5/120 (4%) Query: 2 ETRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEE 61 + L I ++ ++++ + H+ A+ R +G Sbjct: 61 KQNNRFLELIKDIPVNVLNVTDEIIDFARKGLDKELNDGIYITLTDHINYAIERYLQGIN 120 Query: 62 IEPLDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 ++ N LL E+ Q ++ + +++ ++ + ++ E G++ + + + E Sbjct: 121 VQ---NPLLWEIRQFYQEEYKIAAEALKIINQKLMVNLSEDEVGFIALHFVNAELNSEME 177 >UniRef50_B6GB96 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GB96_9ACTN Length = 283 Score = 51.7 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 + D+ +V++++ E V + H+A A+ R ++G D L ++ Sbjct: 62 LPADVLIFTAKVMDIVSNELPYEVSPNAVLIMADHLAFAIARQKKG---ICFDMTLAYDV 118 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 Q ++ + L +E +E+ E + NL A E Sbjct: 119 RQLYPLEYKIGRYIVARLRQEMGVELPHEEIASIAMNLVNAKTGAEAE 166 >UniRef50_Q03XN7 Transcriptional antiterminator n=1 Tax=Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 RepID=Q03XN7_LEUMM Length = 663 Score = 51.7 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 33/93 (35%), Gaps = 2/93 (2%) Query: 19 CKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH 78 + +V E + + + ++A ++ R + G E++ ++ E+ S Sbjct: 194 FDQITIIVLDECREAGIHLTDFTIQNIVLYIALSVQRLKCGFELQAAPVDINPEIRNVS- 252 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + AL+ E YL L Sbjct: 253 -DVARKIFSRIESGLALKFPESEVDYLTIQLMA 284 >UniRef50_A7B640 Putative uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B640_RUMGN Length = 278 Score = 51.3 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 39/98 (39%), Gaps = 5/98 (5%) Query: 17 DICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQ- 75 + K ++ + L + H+ A+ R ++G I+P + LL E+ + Sbjct: 69 EHVKVSSDIITYAKENLKLKLNQSIYVTLTDHINFAITRYQQG--IKPQN-ALLWEIKRF 125 Query: 76 -SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 S ++ + + + ++ + + E G++ + Sbjct: 126 YSREYELGMYAVKTIEEKLRIRLPEDEAGFIALHFLNA 163 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 37/94 (39%), Gaps = 4/94 (4%) Query: 20 KGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNEL--LAELAQ 75 + +++ ++E + + + +TH+ L R R E + ++EL L + Sbjct: 177 NLVKKILEIVEEKLQIELDETSLHYERFVTHIKFLLQRVYRKELLPDEESELAELMQKKY 236 Query: 76 SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + + + +E ++ E YL ++ Sbjct: 237 QKEYDCSKMVAAYIEEETKCSLSGEEIMYLAIHI 270 >UniRef50_C8P1A7 SACPA operon antiterminator (SacT) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1A7_ERYRH Length = 289 Score = 51.3 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 45 AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGY 104 +TH+ A RS + ++L E ++ L +L +EF +++ E GY Sbjct: 220 LITHLKFAFKRSEDNVTLTNPLIDILRE-RYCEAYEISEDLALMLDQEFNIQLPESEIGY 278 Query: 105 LLANLYGL 112 + ++Y L Sbjct: 279 IALHIYNL 286 Score = 46.7 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 1/98 (1%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 D + + E + + H+ A+ R ++ E L Sbjct: 83 DDQVLLVTEAAIAYAEKTLNYKFDESIHISLLDHINFAIYRYHNRVKMSNFFTEEYY-LM 141 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 S + + +++ E +E+ E G ++ +L+ Sbjct: 142 YSELYDISKHMVEMINDELDVELPHSEVGSVILHLHAA 179 >UniRef50_UPI000196B5EC hypothetical protein CATMIT_00421 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B5EC Length = 231 Score = 51.3 bits (122), Expect = 8e-06, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 39/111 (35%), Gaps = 2/111 (1%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPV--RSEQGTMAMTHMASALMRSRRGEEI 62 L+ E +ID++ ++ V + L + + H A+ R + E++ Sbjct: 120 LDFFSECDIIDQETESITLEAVQEINNRLGLNLKKNDDFYQGLSMHFYPAIQRLKNDEQL 179 Query: 63 EPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 + + +Q + L+ V+ + + N E Y+ + Sbjct: 180 HDNVLTDKIKTENETEYQCAMILNDVVKEHYHKSFNEDELAYIALHFGTAL 230 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 40/93 (43%), Gaps = 1/93 (1%) Query: 22 MMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQA 81 + + TE ++ + H+A ++ R G IE + + + +L Q++ +Q Sbjct: 26 IFATIKKYVTEANMNISDTVMDNLSIHLALSITRELSGSYIE-MSSSQIEQLKQANTYQI 84 Query: 82 VVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + L K++ ++++ + Y L + + Sbjct: 85 SQLIIYDLSKKYDVKISEDDICYCAMYLSNMTL 117 >UniRef50_C3RR39 Predicted protein n=2 Tax=Bacteria RepID=C3RR39_9MOLU Length = 628 Score = 51.3 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 37/111 (33%), Gaps = 4/111 (3%) Query: 1 METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGE 60 ++ +L L I K+ + +V + + + H+ ++ R + G Sbjct: 167 IKEQLELQLGHSTIKKEWLATISDIVVDSLMKAKYRISDVVLQNLVLHICVSIQRMQHGI 226 Query: 61 EIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 I DN +A ++ L + + E +L +L G Sbjct: 227 YI---DNPQMAR-QYGHEHVIAKKILDELASIYHFIITENEISFLAIHLLG 273 >UniRef50_C0Z8L8 Transcriptional regulatory protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8L8_BREBN Length = 892 Score = 51.3 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A +ID I + ++V E + + + H+ ++ R +G++I ++ ++ Sbjct: 430 ARIIDPFIIHLVEEIVRFAEAKLEKILSQKVIFGLALHIQTSKERLAQGKQI--VNPQIN 487 Query: 71 A-ELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLA 107 + + ++ +++ + +++ E GYL Sbjct: 488 HVRIKYKKEFAVALECVRMIEEAILMDLPIGEAGYLTM 525 >UniRef50_Q185K2 Putative sigma-54 interacting transcription antiterminator n=9 Tax=Clostridium difficile RepID=Q185K2_CLOD6 Length = 979 Score = 51.3 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 2/99 (2%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 G + + + M +V+ ++ + V H+ A+ R + G+ I + + Sbjct: 490 GGQLKESTLEIMDKVIVFIKEQFK-HVNQGLYLALAIHIEHAIGRIKDGKTIINPSLDKI 548 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANL 109 + ++ + ++ + E GYL + Sbjct: 549 KA-SMPMEYELSRYIMGIVEDLTQVTFPEDELGYLAYYI 586 >UniRef50_Q9KG92 BH0220 protein n=2 Tax=Bacillales RepID=Q9KG92_BACHD Length = 701 Score = 51.3 bits (122), Expect = 9e-06, Method: Composition-based stats. Identities = 12/104 (11%), Positives = 33/104 (31%), Gaps = 1/104 (0%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNEL 69 + + + + V++ E + + + R +G+ I+ + Sbjct: 193 NGRIFTIEELQKVYDVISESEKVLKIQYTDDVLHSLSLRFLLFMKRVAKGKFIK-VHPLE 251 Query: 70 LAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 L + ++A + L + F + E YL ++ Sbjct: 252 KQVLKGTKEYEAAKVMSFKLEQAFGVHYPDEEVLYLTTHILSSK 295 Score = 43.3 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 7/106 (6%) Query: 10 EAGVIDKDICKGMMQVVNVLETECHLPVRSEQGT--MAMTHMASALMRSRRGEEIEPLDN 67 E+ +++ + +VN + + ++ H+ A R + G E+E N Sbjct: 304 ESRKESQELTHIVTSMVNDFQKYACVVFEEKELLEKNLFFHIKPAFYRIKYGLEVE---N 360 Query: 68 ELLAELA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 + + + ++ L + VN E ++ + G Sbjct: 361 NIAESIKTSYPELFLLTRKVVHYLERYVGKSVNDNEVAFITMHFVG 406 >UniRef50_C9BK18 Transcriptional antiterminator bglG/CAT RNA-binding protein n=12 Tax=Enterococcus RepID=C9BK18_ENTFC Length = 291 Score = 51.3 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 40/104 (38%), Gaps = 5/104 (4%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 I + +V+ ++ P+ S H+ A+ R R ++ + +L E Sbjct: 82 QIPIEFMDFAEEVIELITARISSPLDSNIYITLTDHIYFAIQRKREDRDVTAI---MLPE 138 Query: 73 LA--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 + + + V++ + + + E+ E G++ ++ + Sbjct: 139 MRFLYPNEYDIAVEVVERINHRYQTELGSNEVGFITMHIINAEL 182 Score = 40.9 bits (95), Expect = 0.013, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 3/102 (2%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQ--GTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 I + +++ LE E M H+ + R EE + E Sbjct: 190 SLKIVEMTTTILSHLEKSYSNVYDKESLTYHRLMVHIKFLVKRLIYQEETPVENIGFFTE 249 Query: 73 -LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLW 113 S + +++ ++ ++F L + E YL +L ++ Sbjct: 250 TFKHSKAYCTALKIKDIIEQQFQLAIQENEIIYLAIHLARIY 291 >UniRef50_B1MZ35 Transcriptional antiterminator bglG:CAT RNA-binding region n=2 Tax=Bacilli RepID=B1MZ35_LEUCK Length = 286 Score = 51.3 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 5/107 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 I I ++V+ E + + M H+ A+ R+ G I N Sbjct: 64 EAIPITILDATRRIVSEAEKRLNTKLNPMLYIMLSDHLNFAIERAMTGINIT---NRAFW 120 Query: 72 ELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAA 116 E+ + + QV+ ++ + + E + +L A Sbjct: 121 EMKNYYPEEFDLGLFALQVIEQQMNIVLPEEEAANIAFHLINAQTAE 167 >UniRef50_C4L0D3 Transcriptional antiterminator, BglG n=10 Tax=Bacillales RepID=C4L0D3_EXISA Length = 282 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 41/107 (38%), Gaps = 5/107 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + +++ E + H++ A+ R G L N+LL E+ Sbjct: 63 IPVEHFTVSEDIISYAEKRLETSFNEHIHIVLTDHISFAIEREMDG---ISLRNKLLNEI 119 Query: 74 A--QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANE 118 + ++ + + + ++ +++ E ++ +++ + + + Sbjct: 120 KILYRNEYEIGLWAIEHIAEKLNVQMPKDEAAFIALHIHTMKVKGGD 166 Score = 47.1 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 11/102 (10%), Positives = 38/102 (37%), Gaps = 5/102 (4%) Query: 20 KGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL--AQSS 77 + + L + + +TH+ + R + +D ++L + +S Sbjct: 179 DMIQSISRRL--DVSIEEDDLSYQRLLTHLRFVMDRVNHYDH-HTIDEDMLRMIQTKFTS 235 Query: 78 HWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEE 119 + + + + + + + + E GY+ ++ L +++ Sbjct: 236 AYACASDVAKEMEETYGIVLPESELGYITLHIQRLQDQHHQK 277 >UniRef50_C6CKX7 Transcriptional antiterminator, BglG n=1 Tax=Dickeya zeae Ech1591 RepID=C6CKX7_DICZE Length = 289 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 5/106 (4%) Query: 11 AGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELL 70 A + +I + +V +++T+ + H+A AL R G I+ N L Sbjct: 63 AQEVPLEILQLTADIVEMVKTQLPQKLSEGIYVTLADHLAFALQCQRNGTVIQ---NPLQ 119 Query: 71 AELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 E+ + Q ++ + + + E + ++ + Sbjct: 120 WEVRHFYKQEFAVAEQALALIREALGVALPNDEACSIALHIVNAEL 165 >UniRef50_B1CAJ2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAJ2_9FIRM Length = 916 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 5/101 (4%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP--LDNELL 70 ++D I +N E + + + S + H+ S + R G+ IE +++ +L Sbjct: 455 IVDAKILDTCDDAINFAEMKLNRKLSSRIKIGMIMHINSLVSRISNGDSIENKKINDIVL 514 Query: 71 AELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + +L + +++ E G+L L Sbjct: 515 N---NPKEFKIAKFIFTLLEENLNIKIPKYEIGFLTMFLCA 552 Score = 39.0 bits (90), Expect = 0.052, Method: Composition-based stats. Identities = 10/88 (11%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 20 KGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSH- 78 + ++ ++ +E L + + H + R + E I + + +A+ + Sbjct: 827 ELLINSFEIIFSELSLTKTKDIFLRFIMHTGCMIERVLKNETI--PYSNVKKFIAKHKNK 884 Query: 79 WQAVVQLHQVLLKEFALEVNPCEEGYLL 106 ++ + + + + F +++ E Y++ Sbjct: 885 YETIKKGLEKCEESFNIKIPDDEIAYII 912 >UniRef50_B0MAW7 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAW7_9FIRM Length = 642 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 2/98 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 ID+ + ++ + + A+ + + R G I+P + ++ +L Sbjct: 184 IDERQLAKIKNILTDIFVNYKYHIMDTDFNNAILFLNIMICRMGEGFYIQPGELDISEQL 243 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYG 111 ++ + + + F ++V E Y L G Sbjct: 244 GN--EYEIAKAVFGKISRRFFIKVPDEEIRYFSLYLKG 279 >UniRef50_Q18DC6 Beta-glucoside bgl operon transcription antiterminator n=7 Tax=Firmicutes RepID=Q18DC6_CLOD6 Length = 278 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 5 LNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEP 64 L I DI K +++ E + + H A+ R R+G +I Sbjct: 59 KQFLELMDDIPVDILKITQEIIVEAEKLLNSSFNKNLYLILADHFNFAIERMRKGIKIT- 117 Query: 65 LDNELLAELAQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 N + E+ + ++ + ++ + +++ E + + Sbjct: 118 --NRVFWEIKNYYPNEFKVGMVAIYMVEERLGIQLPEEEAANIAFHFANA 165 >UniRef50_C5ENS0 Transcription antiterminator licT n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENS0_9FIRM Length = 284 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 39/110 (35%), Gaps = 5/110 (4%) Query: 13 VIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAE 72 +I ++ + ++V+ T V H+ A+ R ++G DN + Sbjct: 65 LISEEYIEVSKKIVDYGRTVLKTGVHDSIYVTLSDHIELAVSRKKKG---IAFDNAMTWS 121 Query: 73 LAQS--SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV 120 + ++ + +++ E + + E G + + + EV Sbjct: 122 IKKTYREEYHIGEVALKIIQIECGVTLPEEEAGLIALHFVNAKIHNEPEV 171 >UniRef50_C3RIJ4 Transcription antiterminator n=4 Tax=Bacteria RepID=C3RIJ4_9MOLU Length = 281 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 5/105 (4%) Query: 12 GVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLA 71 + + ++VN E E H++ A+ R + L N +L+ Sbjct: 68 ETVPAIYFEITNKIVNQANKELDTDFSGEIFLAISDHISFAVKRKKEEIY---LPNVVLS 124 Query: 72 E--LAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWM 114 E + ++ + + ++ + ++ E GY+ +L + Sbjct: 125 ETKVLYKKEYKVGLWALDYIEEKTGIRLDDDEAGYIALHLVNFSL 169 >UniRef50_B6FR13 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B6FR13_9CLOT Length = 293 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 2/99 (2%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I + + ++ E + R H++ A+ R R GE+I E + L Sbjct: 84 IAPEYLEIANAILVEAEEKFGRIDRRILFP-LADHISFAVERIRHGEQISNPLTEDIRAL 142 Query: 74 AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 S +Q +L ++L + ++E++ E GY+ +++ Sbjct: 143 FGS-EYQVASKLKEILKERLSVEIDSHEIGYVALHIHSA 180 >UniRef50_B0MED2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MED2_9FIRM Length = 908 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 8/112 (7%) Query: 3 TRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEI 62 + NLL +ID + + ++ E + + H+ + R +G Sbjct: 436 EKKNLLK---IIDAKVYYAVEDILQFAEIKLGRKMPERIKVGIAMHVNAMTERISKG--- 489 Query: 63 EPLDNELLAEL--AQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 L + L ++ +Q + ++L +E ++V E GY L + Sbjct: 490 IMLKEKELNDIVLNHPQEFQTAKVMLRLLEEELGIQVPKQEIGYFTMFLCAM 541 Score = 40.6 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 1/92 (1%) Query: 15 DKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELA 74 K + M+ + H+ V E + H+ L R + E + + E+L + Sbjct: 808 PKKMAGQAMESLKESVRALHMEVTRELAVRYVIHLCCMLERLIQEEVLPHQETEILKK-K 866 Query: 75 QSSHWQAVVQLHQVLLKEFALEVNPCEEGYLL 106 + V + + L L++ E YL+ Sbjct: 867 YKHIFDTVKKSLRPLEDCLHLQIPDSETAYLV 898 >UniRef50_B3DQG5 Beta-glucoside operon antiterminator n=24 Tax=Actinobacteridae RepID=B3DQG5_BIFLD Length = 279 Score = 51.0 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 5/101 (4%) Query: 14 IDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAEL 73 I +I + +++ + + H+A+A+ R RRG +I LL E+ Sbjct: 66 IPPEIIRVVVESMQEAGLGERETGSTTLVMALSDHVANAVERVRRGIDITYP---LLGEV 122 Query: 74 AQ--SSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGL 112 + + + L + + E L +L Sbjct: 123 SNLYPQEYAQGRAMLASLNARLDVTLPDGEATALAMHLVNA 163 Score = 48.3 bits (114), Expect = 7e-05, Method: Composition-based stats. Identities = 8/94 (8%), Positives = 38/94 (40%), Gaps = 4/94 (4%) Query: 21 GMMQVVNVLETECHLPVRSEQGTM--AMTHMASALMRSRRGEEIEPLDNELLAELAQ--S 76 + Q++++++ + + + +TH+ +R + +++ ++ + + Sbjct: 179 VIQQLLDIIDHSYGITLDRSSVNVGRFITHLRYLFVRIHQHQQLTDEPAPVMKVIRESYP 238 Query: 77 SHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLY 110 + + + +L +++ E YL ++ Sbjct: 239 AALRCARTIASLLELRLDTDISDDETAYLAMHVA 272 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.320 0.160 0.431 Lambda K H 0.267 0.0485 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 675,254,677 Number of Sequences: 3077464 Number of extensions: 20605804 Number of successful extensions: 78926 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 394 Number of HSP's successfully gapped in prelim test: 565 Number of HSP's that attempted gapping in prelim test: 76737 Number of HSP's gapped (non-prelim): 1883 length of query: 120 length of database: 1,040,396,356 effective HSP length: 87 effective length of query: 33 effective length of database: 772,656,988 effective search space: 25497680604 effective search space used: 25497680604 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 88 (38.3 bits)