171 c1vmaA_ Probab=97.71   E-value=0.00027  Score=42.57  Aligned_columns=128  Identities=19%

Q ss_pred             EEEECCCCCCHHHHHHHHH---HHCCCCEEEEEC---CHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECHHHH
Q ss_conf             9998199986789999999---972998999907---4899999999999718987399356644245688899998999
Q batch____        27 AVIVLPTGAGKSLVIAELA---RLARGRVLVLAH---VKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSV  100 (586)
Q Consensus        27 ~ii~~~TGsGKT~~~~~~~---~~~~~~vl~v~p---~~~L~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~t~~~l  100 (586)
                      ++++.|||+|||.+++.+|   ...++++++++-   |..-.+|...-.+..+.++-.......-.           ..+
T Consensus        95 i~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~-----------~~~  163 (294)
T c1vmaA_          95 IMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPA-----------AVA  163 (294)
T ss_dssp             EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHH-----------HHH
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHH-----------HHH
T ss_conf             999806887602489999999996799489997587686479999999976198289748836989-----------999


Q ss_pred             HHHHHHHH-CCCCEEEEEHHHHHCCCCH-----HHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHH
Q ss_conf             99887321-1466898312464114671-----68999999998718788699413776522157788520
Q batch____       101 ARNLDAFQ-GEFSLLIVDECHRIGDDEE-----SQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFH  165 (586)
Q Consensus       101 ~~~~~~~~-~~~~~viiDEaH~~~~~~~-----~~~~~~~~~l~~~~~~~~~l~~taTp~~~~~~~~~~~~  165 (586)
                      ...+.... .++++|+||.+-+......     ..+...........|+..++.++||..+.+........
T Consensus       164 ~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~  234 (294)
T c1vmaA_         164 FDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFK  234 (294)
T ss_dssp             HHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHH
T ss_conf             99999999779989998188898785799999999999963035668853999811468789999999996