143 c1uaaB_ Probab=98.48   E-value=1.6e-06  Score=55.81  Aligned_columns=83  Identities=16%

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHC-------CCCEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf             476899999999999997279979998199986789999999972-------9989999074899999999999718987
Q batch____         4 TLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLA-------RGRVLVLAHVKELVAQNHAKYQALGLEA   76 (586)
Q Consensus         4 ~Lr~~Q~~ai~~~~~~~~~~~~~~ii~~~TGsGKT~~~~~~~~~~-------~~~vl~v~p~~~L~~Q~~~~~~~~~~~~   76 (586)
                      +|.+-|.+||.       ......+|.+|.|||||.++...+..+       ..+||+++|++..+++..+.+.+..+..
T Consensus         1 ~L~~~Q~~ai~-------~~~~~~lV~g~pGtGKT~~~~~~i~~ll~~~~~~~~~Ilvls~t~~A~~~~~~ri~~~l~~~   73 (633)
T c1uaaB_           1 RLNPGQQQAVE-------FVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRK   73 (633)
T ss_dssp             CCCHHHHHHHH-------CCSSCEEEEECTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHHHHHHHHHHHSCTT
T ss_pred             CCCHHHHHHHH-------CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf             98978999994-------88997899838898677999999999998279997668897469899999999999861001


Q ss_pred             CEEECCCCCCCCCCCEEEECHHHHHHHH
Q ss_conf             3993566442456888999989999988
Q batch____        77 DIFAAGLKRKESHGKVVFGSVQSVARNL  104 (586)
Q Consensus        77 ~~~~~~~~~~~~~~~i~i~t~~~l~~~~  104 (586)
                      +           ..++.|.|++.|....
T Consensus        74 ~-----------~~~v~v~T~~s~~~~i   90 (633)
T c1uaaB_          74 E-----------ARGLMISTFHTLGLDI   90 (633)
T ss_dssp             T-----------TCSCCCEEHHHHHHHH
T ss_pred             C-----------CCCCEEEEHHHHHHHH
T ss_conf             4-----------5681898537999999