284 c3fluD_ Probab=84.18   E-value=2.6  Score=20.31  Aligned_columns=175  Identities=17%

Q ss_pred             CCEEEECCC------CCCCHHHHHHHHHCCCEEEE-------CCCCCHHHHHHHHHHHHH--CCCCCEEEEEECCCCCHH
Q ss_conf             246870764------44678999999988981884-------257997899998876653--026706986635884315
Q batch____        47 VPIIAANMD------TVGTFSMASALASFDILTAV-------HKHYSVEEWQAFINNSSA--DVLKHVMVSTGTSDADFE  111 (347)
Q Consensus        47 ~Pi~~apM~------~~~~~~lA~a~a~~G~~g~~-------~~~~~~e~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  111 (347)
                      +|.+..|++      .-.-.++..-..+.|.-|++       ...++.+|..+..+....  ....++.++++-......
T Consensus         8 ~~~~~TPf~~dg~iD~~~~~~~~~~l~~~Gv~gi~~~G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~vi~gv~~~~~~~~   87 (293)
T c3fluD_           8 LVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEA   87 (293)
T ss_dssp             EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHH
T ss_pred             CCCEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
T ss_conf             01200781898884889999999999977998999877235702179999999999999960899739996588999999


Q ss_pred             HHHHHHHHHCCCCEEEEECCC---CCHHHHHHHHHHHHHHCCCCCEEE-------CCCCCHHHHHHHHHC-CCCEEEECC
Q ss_conf             889999862499807971778---883467778999997268671897-------477999999999966-998999828
Q batch____       112 KTKQILDLNPALNFVCIDVAN---GYSEHFVQFVAKAREAWPTKTICA-------GNVVTGEMCEELILS-GADIVKVGI  180 (347)
Q Consensus       112 ~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~i~~i~~~~~~~~ii~-------k~v~s~e~a~~l~~a-Gad~I~V~g  180 (347)
                      ..........+++++.+..+.   .......+..+.+.+..+ +|+++       +...+++..+++.+. .+-+|..  
T Consensus        88 i~~a~~a~~~Gad~v~~~pP~~~~~s~~~i~~~~~~ia~~~~-~pi~~Yn~P~~tg~~~s~~~~~~L~~~~~v~giK~--  164 (293)
T c3fluD_          88 IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATS-IPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKE--  164 (293)
T ss_dssp             HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCC-SCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEE--
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEC--
T ss_conf             999999985499899993887889998899999999997549-98999967533367759899999834798889963--


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf             788766654335667555999999999711279579960885789999999973899888770
Q batch____       181 GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVMLGG  243 (347)
Q Consensus       181 ~gG~~~~~~~~~~~g~p~~~~l~~~~~~~~~~~vpVIa~GGIr~g~Dv~kALalGAd~V~iGr  243 (347)
                                    ..+...-+..+.+.. ..++.|+....    ..++-++++|+++.+.|.
T Consensus       165 --------------s~~d~~~~~~l~~~~-~~~~~v~~G~d----~~~~~~l~~G~~G~~~~~  208 (293)
T c3fluD_         165 --------------ASGNIGSNIELINRA-PEGFVVLSGDD----HTALPFMLCGGHGVITVA  208 (293)
T ss_dssp             --------------CSCCHHHHHHHHHHS-CTTCEEEECCG----GGHHHHHHTTCCEEEESG
T ss_pred             --------------CCCCHHHHHHHHHHC-CCCEEEEECCH----HHHHHHHHHCCCCHHHHH
T ss_conf             --------------889989999999863-99879994877----999999983774128989