48 c1tv5A_ Probab=99.92   E-value=1.2e-22  Score=148.05  Aligned_columns=255  Identities=16%

Q ss_pred             EECCCCCCCCHHHCCCEEEECCCCCCCCEEECCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCHH-------------
Q ss_conf             6065465678333733488555455683632246870764446789999999889818842579978-------------
Q batch____        16 IRPKRSTLKSRSDVELERQFTFKHSGQSWSGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVE-------------   82 (347)
Q Consensus        16 l~p~~~~~~~~~~vd~s~~~~~~~~~g~~l~~Pi~~apM~~~~~~~lA~a~a~~G~~g~~~~~~~~e-------------   82 (347)
                      |+|+   ....+++|++|++     +|.+++.||.+|+ ..-.+.+.++++.+.|...+.-...+++             
T Consensus        39 l~p~---~~~~~~~~L~~~i-----~G~~~~nPiglAa-G~d~~~~~~~~~~~~G~g~v~~gTvt~~p~~gn~~pr~~~l  109 (371)
T c1tv5A_          39 ILPY---DTSNDSIYACTNI-----KHLDFINPFGVAA-GFDKNGVCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRD  109 (371)
T ss_dssp             CSCC---CCSCCCGGGCEEE-----TTEEESSSEEECT-TTTTTCSSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEE
T ss_pred             CCCC---CCCCCCCCCEEEE-----CCEECCCCEEECC-CCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEE
T ss_conf             7632---2689995204788-----7663189525588-99899899999985899889972046563378999809998


Q ss_pred             -------------------------HHHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             -------------------------99998876653026706986635884----3158899998624998079717788
Q batch____        83 -------------------------EWQAFINNSSADVLKHVMVSTGTSDA----DFEKTKQILDLNPALNFVCIDVANG  133 (347)
Q Consensus        83 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~  133 (347)
                                               .........+.....++.++++.+..    -.+...........++++.++.+..
T Consensus       110 ~~~~~~in~~G~~n~g~~~~~~~~~~~~~~~~~~~~~~~~~~gvsi~~~~~~~~~~~d~~~~~~~~~~~ad~~elNiscP  189 (371)
T c1tv5A_         110 VESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSP  189 (371)
T ss_dssp             TTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCT
T ss_pred             ECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             17861242147788359999998898753211001247623998727888996789999999999874211122122365


Q ss_pred             C---------HHHHHHHHHHHHHHCCC------------CCEEEC------CCCCHHHHHHHHHCCCCEEEECC--CCCC
Q ss_conf             8---------34677789999972686------------718974------77999999999966998999828--7887
Q batch____       134 Y---------SEHFVQFVAKAREAWPT------------KTICAG------NVVTGEMCEELILSGADIVKVGI--GPGS  184 (347)
Q Consensus       134 ~---------~~~~~~~i~~i~~~~~~------------~~ii~k------~v~s~e~a~~l~~aGad~I~V~g--~gG~  184 (347)
                      +         +....+.+..+++....            +|+++|      .....+.++.+.++|+|+|+++|  .+-.
T Consensus       190 n~~~~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~~~~~Pi~vKl~pd~~~~~~~~ia~~a~~~G~dGIv~~Nt~~~~~  269 (371)
T c1tv5A_         190 NTPGLRDNQEAGKLKNIILSVKEEIDNLEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQIN  269 (371)
T ss_dssp             TSTTGGGGGSHHHHHHHHHHHHHHHHHHCCCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             43343224697899999999999876444433102467886899926899967799999999976997999970777734


Q ss_pred             CCCCCCCCCCCCC-------HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHHHCCCCHHHH
Q ss_conf             6665433566755-------599999999971127957996088578999999997389988877075520014610355
Q batch____       185 VCTTRVKTGVGYP-------QLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVE  257 (347)
Q Consensus       185 ~~~~~~~~~~g~p-------~~~~l~~~~~~~~~~~vpVIa~GGIr~g~Dv~kALalGAd~V~iGr~f~~~~Es~g~~~~  257 (347)
                      ..........|++       .+..++.+++...+ ++|||++|||+++.|++++|++|||+|++||.|+.  +.|+.   
T Consensus       270 ~~~~~~~~~GGlSG~~l~p~al~~i~~i~~~~~~-~ipIi~~GGI~~~~Da~~~l~aGA~~Vqi~ta~~~--~Gp~~---  343 (371)
T c1tv5A_         270 DIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVF--NGMKS---  343 (371)
T ss_dssp             CCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTT-CSCEEEESSCCSHHHHHHHHHTTEEEEEESHHHHH--HGGGH---
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHH--CCHHH---
T ss_conf             3334665668411502457999999999997078-98099976889999999999728999999658882--69689---


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCE
Q ss_conf             533200455674321001233210110110001110013411489999999999999999828980678513554
Q batch____       258 ENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTT  332 (347)
Q Consensus       258 ~~~~~~~~~~G~as~~a~~~~~~~~~~~~~~egv~~~~~~~~~v~~~i~~~~~eL~~~m~~~G~~~i~el~~~~e  332 (347)
                                                                     +..+..||+..|...|++||+|++.++.
T Consensus       344 -----------------------------------------------~~~I~~eL~~~l~~~G~~si~e~~G~~h  371 (371)
T c1tv5A_         344 -----------------------------------------------AVQIKRELNHLLYQRGYYNLKEAIGRKH  371 (371)
T ss_dssp             -----------------------------------------------HHHHHHHHHHHHHHHTCSSSGGGTTTTC
T ss_pred             -----------------------------------------------HHHHHHHHHHHHHHCCCCCHHHHCCCCC
T ss_conf             -----------------------------------------------9999999999999858986789516889